name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-D3-A1Q1-06A-21D-A196-08	104	103	1	90	9.615385e-03	0	coding only	34834024	12	83	3.444908e-07	2.382728e-06
TCGA-D3-A1Q3-06A-11D-A196-08	158	153	5	135	3.164557e-02	1	exome+100bp flanks	34834024	16	130	4.593210e-07	3.731983e-06
TCGA-D3-A1Q4-06A-11D-A196-08	327	319	8	213	2.446483e-02	0	coding only	34834024	105	206	3.014294e-06	5.913758e-06
TCGA-D3-A1Q5-06A-11D-A196-08	444	431	13	297	2.927928e-02	0	coding only	34834024	132	287	3.789399e-06	8.239071e-06
TCGA-D3-A1Q6-06A-11D-A196-08	1076	1061	15	692	1.394052e-02	0	coding only	34834024	354	664	1.016248e-05	1.906182e-05
TCGA-D3-A1Q7-06A-11D-A19A-08	128	125	3	79	2.343750e-02	0	coding only	34834024	46	73	1.320548e-06	2.095652e-06
TCGA-D3-A1Q8-06A-11D-A19A-08	296	289	7	195	2.364865e-02	0	coding only	34834024	93	184	2.669804e-06	5.282192e-06
TCGA-D3-A1Q9-06A-11D-A19A-08	41	38	3	33	7.317073e-02	0	coding only	34834024	5	32	1.435378e-07	9.186421e-07
TCGA-D3-A1QA-06A-11D-A196-08	655	644	11	453	1.679389e-02	0	coding only	34834024	188	434	5.397022e-06	1.245908e-05
TCGA-D3-A1QB-06A-11D-A19A-08	450	442	8	298	1.777778e-02	0	coding only	34834024	137	285	3.932936e-06	8.181656e-06
TCGA-D3-A2J6-06A-11D-A19A-08	107	104	3	93	2.803738e-02	0	coding only	34834024	11	89	3.157832e-07	2.554973e-06
TCGA-D3-A2J7-06A-11D-A196-08	425	413	12	296	2.823529e-02	0	coding only	34834024	113	284	3.243955e-06	8.152948e-06
TCGA-D3-A2J8-06A-11D-A196-08	777	769	8	506	1.029601e-02	0	coding only	34834024	253	491	7.263014e-06	1.409541e-05
TCGA-D3-A2J9-06A-11D-A196-08	101	100	1	58	9.900990e-03	0	coding only	34834024	41	50	1.177010e-06	1.435378e-06
TCGA-D3-A2JA-06A-11D-A196-08	435	426	9	297	2.068966e-02	0	coding only	34834024	125	283	3.588446e-06	8.124241e-06
TCGA-D3-A2JB-06A-11D-A196-08	52	50	2	46	3.846154e-02	0	coding only	34834024	3	43	8.612269e-08	1.234425e-06
TCGA-D3-A2JC-06A-11D-A19A-08	293	289	4	211	1.365188e-02	0	coding only	34834024	76	206	2.181775e-06	5.913758e-06
TCGA-D3-A2JD-06A-11D-A19A-08	495	491	4	325	8.080808e-03	0	coding only	34834024	163	313	4.679333e-06	8.985468e-06
TCGA-D3-A2JF-06A-11D-A196-08	1765	1738	27	1200	1.529745e-02	0	coding only	34834024	520	1158	1.492793e-05	3.324336e-05
TCGA-D3-A2JG-06A-11D-A196-08	148	145	3	99	2.027027e-02	0	coding only	34834024	44	94	1.263133e-06	2.698511e-06
TCGA-D3-A2JH-06A-11D-A196-08	783	774	9	520	1.149425e-02	0	coding only	34834024	245	504	7.033353e-06	1.446861e-05
TCGA-D3-A2JK-06A-11D-A196-08	366	361	5	248	1.366120e-02	0	coding only	34834024	112	238	3.215247e-06	6.832400e-06
TCGA-D3-A2JL-06A-11D-A196-08	397	395	2	273	5.037783e-03	0	coding only	34834024	113	260	3.243955e-06	7.463967e-06
TCGA-D3-A2JN-06A-11D-A196-08	396	392	4	275	1.010101e-02	0	coding only	34834024	112	264	3.215247e-06	7.578797e-06
TCGA-D3-A2JO-06A-11D-A196-08	790	771	19	531	2.405063e-02	0	coding only	34834024	234	514	6.717570e-06	1.475569e-05
TCGA-D3-A2JP-06A-11D-A19A-08	326	322	4	233	1.226994e-02	0	coding only	34834024	84	221	2.411435e-06	6.344372e-06
TCGA-D3-A3BZ-06A-12D-A196-08	83	82	1	68	1.204819e-02	0	coding only	34834024	13	64	3.731983e-07	1.837284e-06
TCGA-D3-A3C1-06A-12D-A196-08	186	184	2	131	1.075269e-02	0	coding only	34834024	51	129	1.464086e-06	3.703276e-06
TCGA-D3-A3C3-06A-12D-A19A-08	318	308	10	217	3.144654e-02	1	exome+100bp flanks	34834024	87	207	2.497558e-06	5.942466e-06
TCGA-D3-A3C6-06A-12D-A196-08	169	168	1	115	5.917160e-03	0	coding only	34834024	48	110	1.377963e-06	3.157832e-06
TCGA-D3-A3C7-06A-11D-A196-08	1156	1145	11	802	9.515571e-03	0	coding only	34834024	331	781	9.502204e-06	2.242061e-05
TCGA-D3-A3C8-06A-12D-A19A-08	844	837	7	571	8.293839e-03	0	coding only	34834024	259	552	7.435259e-06	1.584658e-05
TCGA-D3-A3CB-06A-11D-A196-08	329	324	5	214	1.519757e-02	0	coding only	34834024	104	208	2.985587e-06	5.971173e-06
TCGA-D3-A3CC-06A-11D-A19A-08	43	40	3	33	6.976744e-02	0	coding only	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-D3-A3CE-06A-11D-A19A-08	102	101	1	89	9.803922e-03	0	coding only	34834024	11	81	3.157832e-07	2.325313e-06
TCGA-D3-A3CF-06A-11D-A196-08	41	41	0	34	0	0	coding only	34834024	6	31	1.722454e-07	8.899345e-07
TCGA-D3-A3ML-06A-11D-A21A-08	1134	1117	17	750	1.499118e-02	0	coding only	34834024	358	720	1.027731e-05	2.066945e-05
TCGA-D3-A3MO-06A-11D-A21A-08	86	86	0	62	0	0	coding only	34834024	22	61	6.315664e-07	1.751161e-06
TCGA-D3-A3MR-06A-11D-A21A-08	1075	1059	16	719	1.488372e-02	0	coding only	34834024	328	690	9.416081e-06	1.980822e-05
TCGA-D3-A3MU-06A-11D-A21A-08	589	579	10	408	1.697793e-02	0	coding only	34834024	164	386	4.708041e-06	1.108112e-05
TCGA-D3-A3MV-06A-11D-A21A-08	658	648	10	407	1.519757e-02	0	coding only	34834024	229	395	6.574032e-06	1.133949e-05
TCGA-D3-A51E-06A-11D-A25O-08	341	338	3	235	8.797654e-03	0	coding only	34834024	100	227	2.870756e-06	6.516617e-06
TCGA-D3-A51F-06A-11D-A25O-08	146	144	2	98	1.369863e-02	0	coding only	34834024	44	92	1.263133e-06	2.641096e-06
TCGA-D3-A51G-06A-11D-A25O-08	1521	1498	23	988	1.512163e-02	0	coding only	34834024	489	945	1.403800e-05	2.712865e-05
TCGA-D3-A51H-06A-12D-A25O-08	76	74	2	48	2.631579e-02	0	coding only	34834024	25	48	7.176891e-07	1.377963e-06
TCGA-D3-A51J-06A-11D-A25O-08	554	545	9	382	1.624549e-02	0	coding only	34834024	154	368	4.420965e-06	1.056438e-05
TCGA-D3-A51K-06A-11D-A25O-08	30	29	1	24	3.333333e-02	0	coding only	34834024	3	24	8.612269e-08	6.889816e-07
TCGA-D3-A51N-06A-11D-A25O-08	122	120	2	90	1.639344e-02	0	coding only	34834024	28	86	8.038118e-07	2.468851e-06
TCGA-D3-A51R-06A-11D-A25O-08	888	873	15	577	1.689189e-02	0	coding only	34834024	288	552	8.267779e-06	1.584658e-05
TCGA-D3-A51T-06A-11D-A25O-08	1456	1427	29	955	1.991758e-02	0	coding only	34834024	454	915	1.303323e-05	2.626742e-05
TCGA-D3-A5GN-06A-11D-A27K-08	606	597	9	398	1.485149e-02	0	coding only	34834024	190	378	5.454437e-06	1.085146e-05
TCGA-D3-A5GO-06A-12D-A27K-08	1972	1932	40	1280	2.028398e-02	0	coding only	34834024	626	1226	1.797094e-05	3.519547e-05
TCGA-D3-A5GR-06A-11D-A27K-08	339	335	4	220	1.179941e-02	0	coding only	34834024	109	205	3.129125e-06	5.885051e-06
TCGA-D3-A5GS-06A-11D-A27K-08	490	482	8	322	1.632653e-02	0	coding only	34834024	158	309	4.535795e-06	8.870638e-06
TCGA-D3-A5GU-06A-11D-A27K-08	877	861	16	609	1.824401e-02	0	coding only	34834024	248	583	7.119476e-06	1.673651e-05
TCGA-D9-A148-06A-11D-A19A-08	356	350	6	238	1.685393e-02	0	coding only	34834024	107	224	3.071709e-06	6.430495e-06
TCGA-D9-A149-06A-11D-A196-08	300	297	3	217	1.000000e-02	0	coding only	34834024	74	212	2.124360e-06	6.086004e-06
TCGA-D9-A1JW-06A-11D-A19A-08	1111	1092	19	730	1.710171e-02	0	coding only	34834024	346	711	9.932817e-06	2.041108e-05
TCGA-D9-A1JX-06A-11D-A19A-08	228	222	6	156	2.631579e-02	0	coding only	34834024	61	152	1.751161e-06	4.363550e-06
TCGA-D9-A3Z1-06A-11D-A23B-08	629	618	11	405	1.748808e-02	0	coding only	34834024	205	395	5.885051e-06	1.133949e-05
TCGA-D9-A3Z3-06A-11D-A23B-08	169	164	5	112	2.958580e-02	0	coding only	34834024	50	107	1.435378e-06	3.071709e-06
TCGA-D9-A6E9-06A-12D-A30X-08	230	226	4	171	1.739130e-02	0	coding only	34834024	54	160	1.550208e-06	4.593210e-06
TCGA-D9-A6EA-06A-11D-A30X-08	823	816	7	548	8.505468e-03	0	coding only	34834024	257	530	7.377844e-06	1.521501e-05
TCGA-D9-A6EC-06A-11D-A30X-08	5482	5405	77	3862	1.404597e-02	0	coding only	34834024	1472	3710	4.225754e-05	1.065051e-04
TCGA-DA-A1HV-06A-21D-A196-08	1694	1667	27	1111	1.593861e-02	0	coding only	34834024	539	1068	1.547338e-05	3.065968e-05
TCGA-DA-A1HW-06A-11D-A19A-08	408	399	9	261	2.205882e-02	0	coding only	34834024	132	247	3.789399e-06	7.090768e-06
TCGA-DA-A1HY-06A-11D-A19A-08	900	888	12	608	1.333333e-02	0	coding only	34834024	269	589	7.722335e-06	1.690876e-05
TCGA-DA-A1I0-06A-11D-A20D-08	627	614	13	419	2.073365e-02	0	coding only	34834024	190	404	5.454437e-06	1.159786e-05
TCGA-DA-A1I1-06A-12D-A196-08	476	468	8	332	1.680672e-02	0	coding only	34834024	132	325	3.789399e-06	9.329959e-06
TCGA-DA-A1I2-06A-21D-A19A-08	166	159	7	108	4.216867e-02	1	exome+100bp flanks	34834024	48	100	1.377963e-06	2.870756e-06
TCGA-DA-A1I4-06A-11D-A196-08	308	303	5	217	1.623377e-02	0	coding only	34834024	83	208	2.382728e-06	5.971173e-06
TCGA-DA-A1I5-06A-11D-A197-08	538	534	4	363	7.434944e-03	0	coding only	34834024	166	350	4.765456e-06	1.004765e-05
TCGA-DA-A1I7-06A-22D-A197-08	576	566	10	372	1.736111e-02	0	coding only	34834024	184	356	5.282192e-06	1.021989e-05
TCGA-DA-A1I8-06A-11D-A197-08	231	227	4	142	1.731602e-02	0	coding only	34834024	83	136	2.382728e-06	3.904229e-06
TCGA-DA-A1IA-06A-11D-A196-08	409	406	3	261	7.334963e-03	0	coding only	34834024	139	251	3.990352e-06	7.205599e-06
TCGA-DA-A1IB-06A-11D-A196-08	20	19	1	17	5.000000e-02	0	coding only	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-DA-A1IC-06A-11D-A197-08	1188	1166	22	777	1.851852e-02	0	coding only	34834024	375	742	1.076534e-05	2.130101e-05
TCGA-DA-A3F2-06A-11D-A20D-08	9	8	1	5	1.111111e-01	0	coding only	34834024	3	5	8.612269e-08	1.435378e-07
TCGA-DA-A3F3-06A-11D-A20D-08	375	367	8	262	2.133333e-02	0	coding only	34834024	99	249	2.842049e-06	7.148184e-06
TCGA-DA-A3F5-06A-11D-A20D-08	426	420	6	291	1.408451e-02	0	coding only	34834024	123	282	3.531030e-06	8.095533e-06
TCGA-DA-A3F8-06A-11D-A20D-08	1465	1449	16	958	1.092150e-02	0	coding only	34834024	473	918	1.357868e-05	2.635354e-05
TCGA-EB-A44Q-06A-11D-A25O-08	64	64	0	50	0	0	coding only	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-EB-A44R-06A-41D-A25O-08	76	75	1	53	1.315789e-02	0	coding only	34834024	22	51	6.315664e-07	1.464086e-06
TCGA-EB-A5SG-06A-11D-A30X-08	367	364	3	242	8.174387e-03	0	coding only	34834024	115	230	3.301370e-06	6.602740e-06
TCGA-EB-A5SH-06A-11D-A30X-08	118	118	0	93	0	0	coding only	34834024	23	89	6.602740e-07	2.554973e-06
TCGA-EB-A5UL-06A-11D-A30X-08	585	580	5	403	8.547009e-03	0	coding only	34834024	170	380	4.880286e-06	1.090887e-05
TCGA-EB-A5UN-06A-11D-A30X-08	892	877	15	608	1.681614e-02	0	coding only	34834024	257	580	7.377844e-06	1.665039e-05
TCGA-EE-A17X-06A-11D-A197-08	984	965	19	661	1.930894e-02	0	coding only	34834024	293	639	8.411316e-06	1.834413e-05
TCGA-EE-A17Y-06A-11D-A196-08	206	203	3	138	1.456311e-02	0	coding only	34834024	62	129	1.779869e-06	3.703276e-06
TCGA-EE-A17Z-06A-11D-A196-08	34	33	1	29	2.941176e-02	0	coding only	34834024	4	28	1.148303e-07	8.038118e-07
TCGA-EE-A180-06A-11D-A21A-08	643	630	13	439	2.021773e-02	0	coding only	34834024	186	416	5.339607e-06	1.194235e-05
TCGA-EE-A181-06A-11D-A196-08	3698	3661	37	2453	1.000541e-02	0	coding only	34834024	1164	2387	3.341561e-05	6.852496e-05
TCGA-EE-A182-06A-11D-A196-08	1845	1812	33	1189	1.788618e-02	0	coding only	34834024	607	1121	1.742549e-05	3.218118e-05
TCGA-EE-A183-06A-11D-A196-08	945	938	7	651	7.407407e-03	0	coding only	34834024	272	628	7.808458e-06	1.802835e-05
TCGA-EE-A184-06A-11D-A196-08	395	392	3	289	7.594937e-03	0	coding only	34834024	98	283	2.813341e-06	8.124241e-06
TCGA-EE-A185-06A-11D-A196-08	242	237	5	160	2.066116e-02	0	coding only	34834024	75	149	2.153067e-06	4.277427e-06
TCGA-EE-A20B-06A-11D-A196-08	227	219	8	154	3.524229e-02	1	exome+100bp flanks	34834024	64	150	1.837284e-06	4.306135e-06
TCGA-EE-A20C-06A-11D-A196-08	2498	2469	29	1672	1.160929e-02	0	coding only	34834024	776	1607	2.227707e-05	4.613306e-05
TCGA-EE-A20F-06A-21D-A196-08	619	608	11	404	1.777060e-02	0	coding only	34834024	197	389	5.655390e-06	1.116724e-05
TCGA-EE-A20H-06A-11D-A197-08	742	728	14	512	1.886792e-02	0	coding only	34834024	210	485	6.028589e-06	1.392317e-05
TCGA-EE-A20I-06A-11D-A196-08	31	28	3	20	9.677419e-02	0	coding only	34834024	8	18	2.296605e-07	5.167362e-07
TCGA-EE-A29A-06A-12D-A196-08	310	305	5	210	1.612903e-02	0	coding only	34834024	87	203	2.497558e-06	5.827636e-06
TCGA-EE-A29B-06A-11D-A197-08	679	673	6	469	8.836524e-03	0	coding only	34834024	194	463	5.569268e-06	1.329160e-05
TCGA-EE-A29C-06A-21D-A197-08	504	498	6	340	1.190476e-02	0	coding only	34834024	153	334	4.392257e-06	9.588327e-06
TCGA-EE-A29D-06A-11D-A197-08	4716	4634	82	3038	1.738762e-02	0	coding only	34834024	1534	2918	4.403740e-05	8.376867e-05
TCGA-EE-A29E-06A-11D-A197-08	4414	4348	66	2878	1.495242e-02	0	coding only	34834024	1421	2764	4.079345e-05	7.934771e-05
TCGA-EE-A29G-06A-12D-A196-08	499	494	5	339	1.002004e-02	0	coding only	34834024	150	322	4.306135e-06	9.243836e-06
TCGA-EE-A29H-06A-12D-A197-08	397	388	9	262	2.267003e-02	0	coding only	34834024	122	250	3.502323e-06	7.176891e-06
TCGA-EE-A29L-06A-12D-A196-08	2503	2465	38	1649	1.518178e-02	0	coding only	34834024	788	1586	2.262156e-05	4.553020e-05
TCGA-EE-A29M-06A-11D-A196-08	2877	2835	42	1924	1.459854e-02	0	coding only	34834024	878	1834	2.520524e-05	5.264967e-05
TCGA-EE-A29N-06A-12D-A197-08	765	755	10	511	1.307190e-02	0	coding only	34834024	235	484	6.746278e-06	1.389446e-05
TCGA-EE-A29P-06A-11D-A197-08	381	379	2	255	5.249344e-03	0	coding only	34834024	119	237	3.416200e-06	6.803693e-06
TCGA-EE-A29Q-06A-11D-A197-08	380	377	3	251	7.894737e-03	0	coding only	34834024	122	243	3.502323e-06	6.975938e-06
TCGA-EE-A29R-06A-11D-A197-08	848	836	12	541	1.415094e-02	0	coding only	34834024	285	518	8.181656e-06	1.487052e-05
TCGA-EE-A29S-06A-11D-A197-08	1312	1293	19	862	1.448171e-02	0	coding only	34834024	413	826	1.185622e-05	2.371245e-05
TCGA-EE-A29V-06A-12D-A197-08	1246	1230	16	821	1.284109e-02	0	coding only	34834024	397	795	1.139690e-05	2.282251e-05
TCGA-EE-A29W-06A-11D-A196-08	93	93	0	67	0	0	coding only	34834024	25	67	7.176891e-07	1.923407e-06
TCGA-EE-A29X-06A-11D-A196-08	190	187	3	120	1.578947e-02	0	coding only	34834024	65	117	1.865992e-06	3.358785e-06
TCGA-EE-A2A0-06A-11D-A196-08	473	470	3	355	6.342495e-03	0	coding only	34834024	109	338	3.129125e-06	9.703157e-06
TCGA-EE-A2A1-06A-11D-A197-08	481	476	5	329	1.039501e-02	0	coding only	34834024	143	316	4.105182e-06	9.071590e-06
TCGA-EE-A2A2-06A-11D-A196-08	1869	1845	24	1294	1.284109e-02	0	coding only	34834024	527	1233	1.512889e-05	3.539643e-05
TCGA-EE-A2A5-06A-11D-A197-08	394	385	9	270	2.284264e-02	0	coding only	34834024	111	265	3.186540e-06	7.607505e-06
TCGA-EE-A2A6-06A-11D-A197-08	370	365	5	241	1.351351e-02	0	coding only	34834024	120	238	3.444908e-06	6.832400e-06
TCGA-EE-A2GB-06A-11D-A197-08	808	794	14	552	1.732673e-02	0	coding only	34834024	234	534	6.717570e-06	1.532984e-05
TCGA-EE-A2GC-06A-11D-A197-08	2821	2785	36	1867	1.276143e-02	0	coding only	34834024	880	1805	2.526266e-05	5.181715e-05
TCGA-EE-A2GD-06A-11D-A196-08	685	673	12	461	1.751825e-02	0	coding only	34834024	208	444	5.971173e-06	1.274616e-05
TCGA-EE-A2GE-06A-11D-A196-08	292	288	4	193	1.369863e-02	0	coding only	34834024	93	184	2.669804e-06	5.282192e-06
TCGA-EE-A2GH-06A-11D-A196-08	381	373	8	255	2.099738e-02	0	coding only	34834024	115	243	3.301370e-06	6.975938e-06
TCGA-EE-A2GI-06A-11D-A196-08	1974	1947	27	1287	1.367781e-02	0	coding only	34834024	643	1240	1.845896e-05	3.559738e-05
TCGA-EE-A2GJ-06A-11D-A196-08	1426	1400	26	904	1.823282e-02	0	coding only	34834024	476	871	1.366480e-05	2.500429e-05
TCGA-EE-A2GK-06A-11D-A196-08	16	16	0	16	0	0	coding only	34834024	0	15	0	4.306135e-07
TCGA-EE-A2GL-06A-11D-A196-08	442	434	8	292	1.809955e-02	0	coding only	34834024	140	282	4.019059e-06	8.095533e-06
TCGA-EE-A2GM-06B-11D-A196-08	870	852	18	579	2.068966e-02	0	coding only	34834024	263	559	7.550090e-06	1.604753e-05
TCGA-EE-A2GN-06A-11D-A196-08	508	499	9	359	1.771654e-02	0	coding only	34834024	131	346	3.760691e-06	9.932817e-06
TCGA-EE-A2GO-06A-11D-A196-08	2474	2431	43	1573	1.738076e-02	0	coding only	34834024	822	1507	2.359762e-05	4.326230e-05
TCGA-EE-A2GP-06A-11D-A197-08	782	772	10	516	1.278772e-02	0	coding only	34834024	248	502	7.119476e-06	1.441120e-05
TCGA-EE-A2GR-06A-11D-A197-08	1963	1932	31	1282	1.579215e-02	0	coding only	34834024	634	1241	1.820060e-05	3.562609e-05
TCGA-EE-A2GS-06A-12D-A197-08	420	408	12	288	2.857143e-02	0	coding only	34834024	113	276	3.243955e-06	7.923288e-06
TCGA-EE-A2GT-06A-12D-A197-08	433	426	7	293	1.616628e-02	0	coding only	34834024	126	282	3.617153e-06	8.095533e-06
TCGA-EE-A2GU-06A-11D-A196-08	736	725	11	488	1.494565e-02	0	coding only	34834024	232	469	6.660155e-06	1.346385e-05
TCGA-EE-A2M5-06A-12D-A197-08	2432	2393	39	1624	1.603618e-02	0	coding only	34834024	748	1562	2.147326e-05	4.484122e-05
TCGA-EE-A2M6-06A-12D-A197-08	665	657	8	452	1.203008e-02	0	coding only	34834024	199	442	5.712805e-06	1.268874e-05
TCGA-EE-A2M7-06A-11D-A197-08	84	81	3	51	3.571429e-02	0	coding only	34834024	29	51	8.325194e-07	1.464086e-06
TCGA-EE-A2M8-06A-12D-A196-08	152	147	5	97	3.289474e-02	1	exome+100bp flanks	34834024	47	96	1.349256e-06	2.755926e-06
TCGA-EE-A2MC-06A-12D-A197-08	946	933	13	632	1.374207e-02	0	coding only	34834024	282	610	8.095533e-06	1.751161e-05
TCGA-EE-A2MD-06A-11D-A197-08	2094	2072	22	1370	1.050621e-02	0	coding only	34834024	669	1308	1.920536e-05	3.754949e-05
TCGA-EE-A2ME-06A-11D-A197-08	58	57	1	40	1.724138e-02	0	coding only	34834024	15	39	4.306135e-07	1.119595e-06
TCGA-EE-A2MF-06A-11D-A21A-08	940	926	14	633	1.489362e-02	0	coding only	34834024	282	620	8.095533e-06	1.779869e-05
TCGA-EE-A2MG-06A-11D-A197-08	270	268	2	184	7.407407e-03	0	coding only	34834024	78	179	2.239190e-06	5.138654e-06
TCGA-EE-A2MH-06A-11D-A197-08	188	186	2	116	1.063830e-02	0	coding only	34834024	68	107	1.952114e-06	3.071709e-06
TCGA-EE-A2MI-06A-11D-A197-08	1323	1299	24	863	1.814059e-02	0	coding only	34834024	419	834	1.202847e-05	2.394211e-05
TCGA-EE-A2MJ-06A-11D-A197-08	2687	2653	34	1774	1.265352e-02	0	coding only	34834024	856	1709	2.457368e-05	4.906123e-05
TCGA-EE-A2MK-06A-11D-A196-08	366	358	8	243	2.185792e-02	0	coding only	34834024	114	236	3.272662e-06	6.774985e-06
TCGA-EE-A2ML-06A-11D-A197-08	689	677	12	458	1.741655e-02	0	coding only	34834024	210	436	6.028589e-06	1.251650e-05
TCGA-EE-A2MM-06A-11D-A196-08	700	691	9	458	1.285714e-02	0	coding only	34834024	223	440	6.401787e-06	1.263133e-05
TCGA-EE-A2MN-06A-11D-A197-08	193	189	4	119	2.072539e-02	0	coding only	34834024	68	113	1.952114e-06	3.243955e-06
TCGA-EE-A2MP-06A-11D-A197-08	338	335	3	246	8.875740e-03	0	coding only	34834024	84	238	2.411435e-06	6.832400e-06
TCGA-EE-A2MQ-06A-11D-A197-08	333	332	1	228	3.003003e-03	0	coding only	34834024	103	216	2.956879e-06	6.200834e-06
TCGA-EE-A2MR-06A-11D-A196-08	6294	6232	62	3887	9.850651e-03	0	coding only	34834024	2277	3726	6.536712e-05	1.069644e-04
TCGA-EE-A2MS-06A-11D-A197-08	3536	3495	41	2285	1.159502e-02	0	coding only	34834024	1153	2200	3.309982e-05	6.315664e-05
TCGA-EE-A2MT-06A-11D-A197-08	1096	1075	21	748	1.916058e-02	0	coding only	34834024	312	719	8.956760e-06	2.064074e-05
TCGA-EE-A2MU-06A-21D-A196-08	836	823	13	558	1.555024e-02	0	coding only	34834024	255	536	7.320429e-06	1.538725e-05
TCGA-EE-A3AA-06A-11D-A196-08	2210	2185	25	1482	1.131222e-02	0	coding only	34834024	681	1424	1.954985e-05	4.087957e-05
TCGA-EE-A3AB-06A-11D-A196-08	810	798	12	568	1.481481e-02	0	coding only	34834024	223	551	6.401787e-06	1.581787e-05
TCGA-EE-A3AC-06A-11D-A196-08	1230	1213	17	821	1.382114e-02	0	coding only	34834024	377	793	1.082275e-05	2.276510e-05
TCGA-EE-A3AD-06A-11D-A196-08	563	554	9	359	1.598579e-02	0	coding only	34834024	189	345	5.425730e-06	9.904110e-06
TCGA-EE-A3AE-06A-11D-A196-08	1796	1764	32	1157	1.781737e-02	0	coding only	34834024	580	1117	1.665039e-05	3.206635e-05
TCGA-EE-A3AF-06A-11D-A196-08	1161	1148	13	821	1.119724e-02	0	coding only	34834024	312	783	8.956760e-06	2.247802e-05
TCGA-EE-A3AG-06A-31D-A196-08	2096	2064	32	1353	1.526718e-02	0	coding only	34834024	685	1299	1.966468e-05	3.729113e-05
TCGA-EE-A3AH-06A-11D-A196-08	474	469	5	334	1.054852e-02	0	coding only	34834024	134	321	3.846814e-06	9.215128e-06
TCGA-EE-A3J3-06A-11D-A20D-08	226	220	6	141	2.654867e-02	0	coding only	34834024	76	135	2.181775e-06	3.875521e-06
TCGA-EE-A3J4-06A-11D-A20D-08	397	386	11	282	2.770781e-02	0	coding only	34834024	96	272	2.755926e-06	7.808458e-06
TCGA-EE-A3J5-06A-11D-A20D-08	2605	2559	46	1770	1.765835e-02	0	coding only	34834024	763	1708	2.190387e-05	4.903252e-05
TCGA-EE-A3J7-06A-11D-A20D-08	1241	1230	11	819	8.863820e-03	0	coding only	34834024	396	783	1.136820e-05	2.247802e-05
TCGA-EE-A3J8-06A-11D-A20D-08	337	329	8	227	2.373887e-02	0	coding only	34834024	100	213	2.870756e-06	6.114711e-06
TCGA-EE-A3JA-06A-11D-A20D-08	1261	1245	16	805	1.268834e-02	0	coding only	34834024	415	771	1.191364e-05	2.213353e-05
TCGA-EE-A3JB-06A-11D-A21A-08	762	751	11	509	1.443570e-02	0	coding only	34834024	232	488	6.660155e-06	1.400929e-05
TCGA-EE-A3JD-06A-11D-A20D-08	3629	3591	38	2371	1.047120e-02	0	coding only	34834024	1169	2282	3.355914e-05	6.551066e-05
TCGA-EE-A3JE-06A-11D-A20D-08	332	328	4	241	1.204819e-02	0	coding only	34834024	84	234	2.411435e-06	6.717570e-06
TCGA-EE-A3JH-06A-11D-A21A-08	231	230	1	147	4.329004e-03	0	coding only	34834024	77	141	2.210482e-06	4.047767e-06
TCGA-EE-A3JI-06A-11D-A21A-08	1430	1408	22	998	1.538462e-02	0	coding only	34834024	391	956	1.122466e-05	2.744443e-05
TCGA-ER-A193-06A-12D-A197-08	2359	2325	34	1612	1.441289e-02	0	coding only	34834024	690	1555	1.980822e-05	4.464026e-05
TCGA-ER-A195-06A-11D-A196-08	321	318	3	211	9.345794e-03	0	coding only	34834024	101	201	2.899464e-06	5.770221e-06
TCGA-ER-A197-06A-32D-A197-08	56	56	0	46	0	0	coding only	34834024	10	45	2.870756e-07	1.291840e-06
TCGA-ER-A198-06A-11D-A196-08	567	560	7	388	1.234568e-02	0	coding only	34834024	165	376	4.736748e-06	1.079404e-05
TCGA-ER-A199-06A-11D-A197-08	348	340	8	239	2.298851e-02	0	coding only	34834024	98	231	2.813341e-06	6.631447e-06
TCGA-ER-A19A-06A-21D-A197-08	437	437	0	281	0	0	coding only	34834024	150	272	4.306135e-06	7.808458e-06
TCGA-ER-A19B-06A-11D-A196-08	140	140	0	106	0	0	coding only	34834024	33	99	9.473496e-07	2.842049e-06
TCGA-ER-A19C-06A-11D-A196-08	129	125	4	77	3.100775e-02	0	coding only	34834024	46	73	1.320548e-06	2.095652e-06
TCGA-ER-A19D-06A-11D-A197-08	574	562	12	361	2.090592e-02	0	coding only	34834024	191	347	5.483145e-06	9.961525e-06
TCGA-ER-A19E-06A-11D-A197-08	555	546	9	381	1.621622e-02	0	coding only	34834024	160	367	4.593210e-06	1.053568e-05
TCGA-ER-A19F-06A-11D-A196-08	1218	1201	17	823	1.395731e-02	0	coding only	34834024	356	793	1.021989e-05	2.276510e-05
TCGA-ER-A19G-06A-11D-A196-08	644	638	6	419	9.316770e-03	0	coding only	34834024	212	405	6.086004e-06	1.162656e-05
TCGA-ER-A19H-06A-12D-A196-08	324	321	3	211	9.259259e-03	0	coding only	34834024	108	203	3.100417e-06	5.827636e-06
TCGA-ER-A19J-06A-11D-A196-08	276	268	8	183	2.898551e-02	0	coding only	34834024	82	174	2.354020e-06	4.995116e-06
TCGA-ER-A19L-06A-12D-A197-08	73	71	2	48	2.739726e-02	0	coding only	34834024	20	45	5.741513e-07	1.291840e-06
TCGA-ER-A19M-06A-61D-A23B-08	603	595	8	389	1.326700e-02	0	coding only	34834024	197	374	5.655390e-06	1.073663e-05
TCGA-ER-A19N-06A-11D-A197-08	588	579	9	401	1.530612e-02	0	coding only	34834024	167	384	4.794163e-06	1.102370e-05
TCGA-ER-A19O-06A-11D-A197-08	214	211	3	148	1.401869e-02	0	coding only	34834024	63	141	1.808577e-06	4.047767e-06
TCGA-ER-A19P-06A-11D-A196-08	985	969	16	713	1.624365e-02	0	coding only	34834024	245	686	7.033353e-06	1.969339e-05
TCGA-ER-A19Q-06A-11D-A197-08	151	151	0	109	0	0	coding only	34834024	41	104	1.177010e-06	2.985587e-06
TCGA-ER-A19S-06A-11D-A196-08	269	265	4	185	1.486989e-02	0	coding only	34834024	76	179	2.181775e-06	5.138654e-06
TCGA-ER-A19T-06A-11D-A19A-08	66	65	1	54	1.515152e-02	0	coding only	34834024	11	51	3.157832e-07	1.464086e-06
TCGA-ER-A19W-06A-41D-A23B-08	438	431	7	275	1.598174e-02	0	coding only	34834024	145	263	4.162597e-06	7.550090e-06
TCGA-ER-A1A1-06A-11D-A197-08	294	292	2	203	6.802721e-03	0	coding only	34834024	86	196	2.468851e-06	5.626683e-06
TCGA-ER-A2NC-06A-11D-A197-08	474	466	8	312	1.687764e-02	0	coding only	34834024	150	299	4.306135e-06	8.583562e-06
TCGA-ER-A2ND-06A-11D-A196-08	134	131	3	100	2.238806e-02	0	coding only	34834024	31	92	8.899345e-07	2.641096e-06
TCGA-ER-A2NE-06A-21D-A196-08	177	172	5	125	2.824859e-02	0	coding only	34834024	44	120	1.263133e-06	3.444908e-06
TCGA-ER-A2NF-06A-11D-A19A-08	40	39	1	27	2.500000e-02	0	coding only	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-ER-A2NG-06A-11D-A196-08	310	304	6	214	1.935484e-02	0	coding only	34834024	88	202	2.526266e-06	5.798928e-06
TCGA-ER-A2NH-06A-11D-A196-08	394	388	6	258	1.522843e-02	0	coding only	34834024	126	253	3.617153e-06	7.263014e-06
TCGA-ER-A3ES-06A-11D-A20D-08	41	40	1	35	2.439024e-02	0	coding only	34834024	5	34	1.435378e-07	9.760572e-07
TCGA-ER-A3ET-06A-11D-A20D-08	119	118	1	94	8.403361e-03	0	coding only	34834024	23	93	6.602740e-07	2.669804e-06
TCGA-ER-A3EV-06A-11D-A20D-08	118	118	0	95	0	0	coding only	34834024	19	93	5.454437e-07	2.669804e-06
TCGA-ER-A3PL-06A-11D-A23B-08	462	457	5	294	1.082251e-02	0	coding only	34834024	152	272	4.363550e-06	7.808458e-06
TCGA-ER-A42K-06A-11D-A24R-08	240	233	7	162	2.916667e-02	0	coding only	34834024	70	155	2.009530e-06	4.449673e-06
TCGA-ER-A42L-06A-11D-A24R-08	1259	1238	21	821	1.667990e-02	0	coding only	34834024	402	785	1.154044e-05	2.253544e-05
TCGA-FR-A3YN-06A-11D-A23B-08	728	712	16	469	2.197802e-02	0	coding only	34834024	237	453	6.803693e-06	1.300453e-05
TCGA-FR-A3YO-06A-11D-A23B-08	1072	1059	13	699	1.212687e-02	0	coding only	34834024	352	668	1.010506e-05	1.917665e-05
TCGA-FR-A44A-06A-11D-A24R-08	379	374	5	243	1.319261e-02	0	coding only	34834024	128	233	3.674568e-06	6.688863e-06
TCGA-FR-A69P-06A-21D-A30X-08	277	272	5	192	1.805054e-02	0	coding only	34834024	78	183	2.239190e-06	5.253484e-06
TCGA-FS-A1YW-06A-11D-A197-08	207	199	8	139	3.864734e-02	1	exome+100bp flanks	34834024	59	133	1.693746e-06	3.818106e-06
TCGA-FS-A1YX-06A-11D-A197-08	30	30	0	25	0	0	coding only	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-FS-A1YY-06A-11D-A197-08	262	254	8	163	3.053435e-02	1	exome+100bp flanks	34834024	89	158	2.554973e-06	4.535795e-06
TCGA-FS-A1Z0-06A-11D-A197-08	318	316	2	223	6.289308e-03	0	coding only	34834024	89	214	2.554973e-06	6.143419e-06
TCGA-FS-A1Z3-06A-11D-A197-08	1272	1250	22	858	1.729560e-02	0	coding only	34834024	383	833	1.099500e-05	2.391340e-05
TCGA-FS-A1Z4-06A-11D-A197-08	57	57	0	44	0	0	coding only	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-FS-A1Z7-06A-11D-A197-08	231	227	4	152	1.731602e-02	0	coding only	34834024	73	149	2.095652e-06	4.277427e-06
TCGA-FS-A1ZA-06A-11D-A197-08	1461	1438	23	973	1.574264e-02	0	coding only	34834024	444	945	1.274616e-05	2.712865e-05
TCGA-FS-A1ZB-06A-12D-A197-08	297	293	4	197	1.346801e-02	0	coding only	34834024	91	189	2.612388e-06	5.425730e-06
TCGA-FS-A1ZC-06A-11D-A197-08	887	871	16	566	1.803833e-02	0	coding only	34834024	295	544	8.468732e-06	1.561692e-05
TCGA-FS-A1ZD-06A-11D-A197-08	308	306	2	221	6.493506e-03	0	coding only	34834024	82	215	2.354020e-06	6.172126e-06
TCGA-FS-A1ZE-06A-11D-A197-08	189	179	10	128	5.291005e-02	1	exome+100bp flanks	34834024	50	124	1.435378e-06	3.559738e-06
TCGA-FS-A1ZF-06A-12D-A197-08	251	241	10	162	3.984064e-02	1	exome+100bp flanks	34834024	75	158	2.153067e-06	4.535795e-06
TCGA-FS-A1ZG-06A-11D-A197-08	44	44	0	29	0	0	coding only	34834024	15	28	4.306135e-07	8.038118e-07
TCGA-FS-A1ZH-06A-11D-A197-08	43	41	2	30	4.651163e-02	0	coding only	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-FS-A1ZJ-06A-12D-A197-08	103	100	3	79	2.912621e-02	0	coding only	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-FS-A1ZK-06A-11D-A197-08	1936	1915	21	1269	1.084711e-02	0	coding only	34834024	616	1228	1.768386e-05	3.525289e-05
TCGA-FS-A1ZM-06A-12D-A197-08	307	300	7	214	2.280130e-02	0	coding only	34834024	80	205	2.296605e-06	5.885051e-06
TCGA-FS-A1ZP-06A-11D-A197-08	540	538	2	351	3.703704e-03	0	coding only	34834024	179	342	5.138654e-06	9.817987e-06
TCGA-FS-A1ZQ-06A-11D-A197-08	624	614	10	395	1.602564e-02	0	coding only	34834024	216	382	6.200834e-06	1.096629e-05
TCGA-FS-A1ZR-06A-21D-A197-08	181	180	1	128	5.524862e-03	0	coding only	34834024	50	126	1.435378e-06	3.617153e-06
TCGA-FS-A1ZS-06A-12D-A197-08	345	339	6	212	1.739130e-02	0	coding only	34834024	124	202	3.559738e-06	5.798928e-06
TCGA-FS-A1ZT-06A-11D-A197-08	222	214	8	148	3.603604e-02	1	exome+100bp flanks	34834024	62	138	1.779869e-06	3.961644e-06
TCGA-FS-A1ZU-06A-12D-A196-08	60	56	4	39	6.666667e-02	0	coding only	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-FS-A1ZW-06A-12D-A197-08	805	791	14	541	1.739130e-02	0	coding only	34834024	242	522	6.947231e-06	1.498535e-05
TCGA-FS-A1ZY-06A-11D-A197-08	42	39	3	26	7.142857e-02	0	coding only	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-FS-A1ZZ-06A-11D-A197-08	1934	1899	35	1225	1.809721e-02	0	coding only	34834024	644	1171	1.848767e-05	3.361656e-05
TCGA-FS-A4F0-06A-11D-A24R-08	653	642	11	458	1.684533e-02	0	coding only	34834024	180	431	5.167362e-06	1.237296e-05
TCGA-FS-A4F4-06A-12D-A25O-08	61	59	2	43	3.278689e-02	0	coding only	34834024	16	40	4.593210e-07	1.148303e-06
TCGA-FS-A4F5-06A-11D-A25O-08	940	922	18	640	1.914894e-02	0	coding only	34834024	266	616	7.636212e-06	1.768386e-05
TCGA-FS-A4F8-06A-11D-A25O-08	224	222	2	160	8.928571e-03	0	coding only	34834024	58	153	1.665039e-06	4.392257e-06
TCGA-FS-A4F9-06A-11D-A24R-08	570	557	13	377	2.280702e-02	0	coding only	34834024	170	366	4.880286e-06	1.050697e-05
TCGA-FS-A4FB-06A-11D-A25O-08	229	223	6	158	2.620087e-02	0	coding only	34834024	61	151	1.751161e-06	4.334842e-06
TCGA-FS-A4FC-06A-11D-A24R-08	885	878	7	605	7.909605e-03	0	coding only	34834024	267	579	7.664920e-06	1.662168e-05
TCGA-FS-A4FD-06A-11D-A25O-08	558	549	9	375	1.612903e-02	0	coding only	34834024	167	356	4.794163e-06	1.021989e-05
TCGA-FW-A3I3-06A-11D-A21A-08	84	82	2	56	2.380952e-02	0	coding only	34834024	25	55	7.176891e-07	1.578916e-06
TCGA-FW-A3R5-06A-11D-A23B-08	24851	24464	387	15767	1.557281e-02	0	coding only	34834024	8378	15173	2.405120e-04	4.355799e-04
TCGA-FW-A3TU-06A-11D-A23B-08	928	917	11	621	1.185345e-02	0	coding only	34834024	284	593	8.152948e-06	1.702359e-05
TCGA-FW-A3TV-06A-11D-A23B-08	421	412	9	280	2.137767e-02	0	coding only	34834024	130	271	3.731983e-06	7.779750e-06
TCGA-FW-A5DY-06A-11D-A30X-08	285	282	3	189	1.052632e-02	0	coding only	34834024	91	185	2.612388e-06	5.310899e-06
TCGA-GF-A3OT-06A-23D-A23B-08	673	665	8	445	1.188707e-02	0	coding only	34834024	216	425	6.200834e-06	1.220072e-05
TCGA-GF-A4EO-06A-12D-A24R-08	315	306	9	211	2.857143e-02	0	coding only	34834024	92	204	2.641096e-06	5.856343e-06
TCGA-GF-A6C8-06A-12D-A30X-08	461	454	7	312	1.518438e-02	0	coding only	34834024	139	306	3.990352e-06	8.784515e-06
TCGA-GF-A6C9-06A-11D-A30X-08	4225	4186	39	2744	9.230769e-03	0	coding only	34834024	1387	2648	3.981739e-05	7.601763e-05
TCGA-GN-A261-06A-12D-A197-08	16	15	1	15	6.250000e-02	0	coding only	34834024	0	14	0	4.019059e-07
TCGA-GN-A262-06A-11D-A196-08	473	470	3	340	6.342495e-03	0	coding only	34834024	125	326	3.588446e-06	9.358666e-06
TCGA-GN-A264-06A-11D-A196-08	63	61	2	48	3.174603e-02	0	coding only	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-GN-A265-06A-21D-A197-08	362	359	3	275	8.287293e-03	0	coding only	34834024	84	267	2.411435e-06	7.664920e-06
TCGA-GN-A266-06A-11D-A197-08	4754	4697	57	3093	1.198990e-02	0	coding only	34834024	1559	2984	4.475509e-05	8.566337e-05
TCGA-GN-A267-06A-21D-A196-08	499	494	5	328	1.002004e-02	0	coding only	34834024	160	313	4.593210e-06	8.985468e-06
TCGA-GN-A268-06A-11D-A196-08	424	420	4	286	9.433962e-03	0	coding only	34834024	132	268	3.789399e-06	7.693627e-06
TCGA-GN-A26A-06A-11D-A19A-08	408	402	6	284	1.470588e-02	0	coding only	34834024	110	269	3.157832e-06	7.722335e-06
TCGA-GN-A26D-06A-11D-A19A-08	63	60	3	48	4.761905e-02	0	coding only	34834024	12	46	3.444908e-07	1.320548e-06
TCGA-QB-A6FS-06A-11D-A30X-08	1439	1418	21	959	1.459347e-02	0	coding only	34834024	440	915	1.263133e-05	2.626742e-05
TCGA-RP-A690-06A-11D-A30X-08	20	19	1	14	5.000000e-02	0	coding only	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-RP-A693-06A-13D-A30X-08	942	930	12	658	1.273885e-02	0	coding only	34834024	262	636	7.521382e-06	1.825801e-05
TCGA-RP-A694-06A-11D-A30X-08	857	846	11	571	1.283547e-02	0	coding only	34834024	266	538	7.636212e-06	1.544467e-05
TCGA-RP-A695-06A-11D-A30X-08	1055	1040	15	715	1.421801e-02	0	coding only	34834024	313	688	8.985468e-06	1.975080e-05