
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/BLCA-TP/8100855/BLCA-TP.meth.by_max_stddev.data.txt", "-u10281", "-oBLCA-TP")
Cluster size 10281 broken into 6485 3796 
Cluster size 6485 broken into 3007 3478 
Cluster size 3007 broken into 1319 1688 
Done cluster 1319 
Cluster size 1688 broken into 613 1075 
Done cluster 613 
Done cluster 1075 
Done cluster 1688 
Done cluster 3007 
Cluster size 3478 broken into 1274 2204 
Done cluster 1274 
Cluster size 2204 broken into 1447 757 
Done cluster 1447 
Done cluster 757 
Done cluster 2204 
Done cluster 3478 
Done cluster 6485 
Cluster size 3796 broken into 1720 2076 
Cluster size 1720 broken into 755 965 
Done cluster 755 
Done cluster 965 
Done cluster 1720 
Cluster size 2076 broken into 1032 1044 
Done cluster 1032 
Done cluster 1044 
Done cluster 2076 
Done cluster 3796 
> q(save="no")
