index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	234277251	235384114	235076299	235084043	234933506	235128860	0	[LOC100506810]	0	[TOMM20]	
2	1	149881398	158514650	150600181	150622696	150043544	151090382	32	hsa-mir-4257,ARNT,CTSK,CTSS,ECM1,ENSA,MCL1,ANXA9,PRPF3,SETDB1,MLLT11,VPS45,RPRD2,CA14,CERS2,APH1A,PLEKHO1,MRPS21,ADAMTSL4,C1orf56,GOLPH3L,FAM63A,CDC42SE1,PRUNE,C1orf54,TARS2,ANP32E,HORMAD1,GABPB2,C1orf51,BNIPL,MIR4257,	2	ENSA,GOLPH3L,	
3	1	10633245	11238416	10876600	11018065	10687726	11131457	7	PEX14,EXOSC10,SRM,MASP2,TARDBP,CASZ1,C1orf127,	1	C1orf127,	
4	3	153196036	197538677	184438311	184457639	184326864	184543503	2	VPS8,MAGEF1,	0	[MAGEF1]	
5	5	34754305	50133376	41600324	42004327	35591197	50124856	62	hsa-mir-1274a,hsa-mir-580,C6,C7,C9,DAB2,FGF10,FYB,GDNF,GHR,HMGCS1,IL7R,LIFR,OXCT1,PRKAA1,PTGER4,RPL37,SEPP1,SKP2,SLC1A3,ZNF131,OSMR,NUP155,PAIP1,MRPS30,NNT,TTC33,NIPBL,FBXO4,WDR70,CCL28,C5orf28,C5orf42,PARP8,SPEF2,CARD6,LMBRD2,EMB,HEATR7B2,EGFLAM,NADKD1,UGT3A1,CAPSL,LOC153684,UGT3A2,NIM1,RANBP3L,RICTOR,C5orf51,PLCXD3,HCN1,C5orf34,C5orf39,SNORD72,LOC646719,LOC648987,MIR580,CCDC152,LOC100132356,MIR3650,LOC100506548,EGFLAM-AS4,	3	OXCT1,FBXO4,C5orf51,	
6	5	914233	4584416	914233	1020354	914233	15194911	81	hsa-mir-4278,hsa-mir-4277,ADCY2,CTNND2,DAP,DNAH5,MTRR,NDUFS6,SDHA,SLC6A3,SLC9A3,SRD5A1,TERT,TRIO,SEMA5A,TRIP13,PDCD6,MARCH6,SLC12A7,PAPD7,TPPP,EXOC3,CCT5,KIAA0947,PP7080,IRX4,TAS2R1,FAM105A,NSUN2,CEP72,ANKH,AHRR,MRPL36,BRD9,FASTKD3,IRX1,ZDHHC11,LPCAT1,CLPTM1L,ROPN1L,MED10,NKD2,FAM105B,C5orf55,CCDC127,UBE2QL1,C5orf49,FAM173B,CMBL,PLEKHG4B,C5orf38,IRX2,ADAMTS16,LOC255167,LOC285577,LOC285692,SLC6A19,LOC340094,SLC6A18,LRRC14B,FLJ33360,TAG,LOC442132,ANKRD33B,SDHAP3,LOC728613,LOC729506,SNORD123,LOC100130744,MIR4277,MIR4278,LOC100505738,LOC100505806,LOC100506688,MIR4458,MIR4454,MIR4457,MIR4637,MIR4636,MIR4456,MIR4635,	23	SDHA,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,CEP72,AHRR,BRD9,ZDHHC11,NKD2,C5orf55,CCDC127,PLEKHG4B,SLC6A19,SLC6A18,LRRC14B,LOC100506688,MIR4456,MIR4635,	
7	6	39514771	47930727	43657737	43657737	43598755	43810974	5	VEGFA,MAD2L1BP,GTPBP2,MRPS18A,RSPH9,	0	[MRPS18A]	
8	6	107111381	107409119	107120782	107166555	107120530	107221059	2	QRSL1,LOC100422737,	1	LOC100422737,	
9	6	63886285	64327031	64062385	64154037	63903403	64323654	2	PTP4A1,LGSN,	0	[LGSN]	
10	7	83184920	101470889	92341976	92389516	92117993	92556768	6	CDK6,PEX1,RBM48,MGC16142,FAM133B,LOC728066,	1	CDK6,	
11	7	53823802	56217051	55082175	55099784	55027846	55440320	2	EGFR,LANCL2,	1	EGFR,	
12	7	705284	10121066	5212692	5291935	705284	10049993	94	hsa-mir-589,hsa-mir-339,ACTB,GNA12,GPER,ICA1,LFNG,NUDT1,PDGFA,PMS2,PRKAR1B,RAC1,RPA3,FSCN1,ZNF12,AIMP2,MAFK,MAD1L1,EIF3B,CYTH3,KIAA0415,KDELR2,ADAP1,IQCE,SUN1,WIPI2,INTS1,EIF2AK1,SNX8,FTSJ2,NXPH1,GET4,CCZ1,MIOS,RNF216,ZNF853,CYP2W1,HEATR2,ZDHHC4,CHST12,RADIL,PAPOLB,C1GALT1,FAM20C,RBAK,C7orf26,MICALL2,FBXL18,TTYH3,USP42,PSMG3,C7orf50,CARD11,TNRC18,C7orf70,ZFAND2A,COX19,GLCCI1,KIAA1908,GPR146,AMZ1,PER4,TMEM184A,BRAT1,SDK1,FOXK1,MMD2,DAGLB,CCZ1B,SLC29A4,RSPH10B,TFAMP1,UNCX,COL28A1,LOC389458,ELFN1,GRID2IP,ZNF815,RNF216P1,PMS2CL,FLJ44511,LOC442497,MIR339,ZNF890P,OCM,MIR589,RSPH10B2,LOC729852,LOC100131257,LOC100288524,RBAK-LOC389458,MIR4648,MIR4655,MIR4656,	1	WIPI2,	
13	8	98527608	145232496	128716879	128722935	128714853	128726770	0	[MYC]	0	[MYC]	
14	8	8459696	14019069	11553144	11633282	11547971	11638878	2	GATA4,NEIL2,	2	GATA4,NEIL2,	
15	9	4772328	5742450	5564748	5603231	4993043	5708859	9	INSL4,JAK2,RLN1,RLN2,INSL6,CD274,C9orf46,KIAA1432,PDCD1LG2,	3	CD274,C9orf46,PDCD1LG2,	
16	9	139338627	140938752	139968796	140023306	139810529	140290821	38	ABCA2,C8G,ENTPD2,FUT7,GRIN1,PTGDS,TRAF2,SSNA1,CLIC3,TUBB4B,MAN1B1,COBRA1,NDOR1,ANAPC2,DPP7,FBXW5,C9orf167,EXD3,NPDC1,SAPCD2,UAP1L1,TMEM203,SLC34A3,LCN12,C9orf142,TPRN,C9orf169,LRRC26,LCNL1,C9orf139,FAM166A,C9orf173,NRARP,RNF224,RNF208,LOC100129722,LOC100289341,MIR3621,	6	GRIN1,MAN1B1,DPP7,SAPCD2,UAP1L1,LOC100289341,	
17	9	35615644	36127159	35843003	36073433	32137678	36493745	91	ACO1,ANXA2P2,NUDT2,AQP3,AQP7,BAG1,CA9,CCIN,CD72,CLTA,CNTFR,FANCG,GALT,B4GALT1,DNAJA1,IL11RA,NDUFB6,NFX1,NPR2,PRSS3,RMRP,CCL19,CCL21,TESK1,TLN1,TPM2,VCP,RECK,RGP1,RUSC2,GNE,TOPORS,SIGMAR1,CREB3,UNC13B,CCL27,PTENP1,DCTN3,KIAA1045,DDX58,DNAJB5,DCAF12,SPAG8,DNAI1,SIT1,SPINK4,STOML2,UBAP1,CHMP5,TMEM8B,APTX,UBE2R2,SMU1,UBAP2,OR2S2,KIAA1161,GBA2,NOL6,FAM214B,HINT2,C9orf24,PIGO,C9orf100,FP588,TAF1L,ARID3C,C9orf23,C9orf131,RNF38,GLIPR2,LOC158376,ATP8B5P,C9orf25,CCDC107,FAM205A,KIF24,ENHO,FAM205B,C9orf128,OR13J1,TMEM215,LOC415056,SUGT1P1,ANKRD18B,HRCT1,MSMP,FAM166B,SNORD121A,SNORD121B,LOC100129250,MIR4667,	7	RECK,TMEM8B,OR2S2,FP588,LOC158376,OR13J1,HRCT1,	
18	10	122436316	124014939	123240578	123320471	123172835	123398895	1	FGFR2,	1	FGFR2,	
19	10	76396509	78393903	77082781	77136073	72144422	82154691	93	hsa-mir-606,ADK,ANXA7,ANXA11,CAMK2G,EIF4EBP2,KCNMA1,MAT1A,NODAL,P4HA1,PCBD1,PLAU,PPP3CB,PRF1,PSAP,RPS24,SFTPD,VCL,VDAC2,NDST2,MBL1P,SGPL1,DLG5,CHST3,SEC24C,SPOCK2,PPIF,MICU1,POLR3A,ECD,KIAA0913,DNAJC9,KAT6B,NUDT13,AP3M1,KIAA1274,ASCC1,MRPS16,DUSP13,DDIT4,DNAJB12,LRRC20,SLC29A3,ZMIZ1,MYOZ1,CDH23,C10orf54,SYNPO2L,FAM213A,C10orf11,DYDC2,PLA2G12B,ZNF503,MCU,CHCHD1,ZMYND17,TTC18,COMTD1,ANAPC16,ADAMTS14,SAMD8,DYDC1,EIF5AL1,USP54,FUT11,OIT3,LOC219347,PLAC9,ZCCHC24,UNC5B,C10orf27,ZNF503-AS1,LOC283050,FAM149B1,DUPD1,C10orf105,C10orf55,C10orf103,LOC439990,LOC642361,LOC650623,SFTPA1,LOC728978,AGAP5,BMS1P4,SFTPA2,LOC100128292,ZNF503-AS2,LOC100132987,LOC100288974,MIR1256,LOC100507331,MIR4676,	1	ZNF503-AS1,	
20	10	32087901	32441611	32160519	32294692	31651946	34251729	9	ITGB1,KIF5B,ZEB1,NRP1,C10orf68,EPC1,ARHGAP12,CCDC7,LOC100505583,	1	ARHGAP12,	
21	11	66570595	71430356	69514341	69530753	69246533	69594005	4	CCND1,FGF4,FGF19,ORAOV1,	1	FGF19,	
22	11	34401385	36321120	35244574	35256693	35244058	35259407	1	CD44,	1	CD44,	
23	12	22155536	29558585	25386944	25402069	25348931	25414348	2	KRAS,LYRM5,	1	KRAS,	
24	12	64885951	72125548	69542338	69548522	69275198	70035437	11	hsa-mir-1279,CPM,LYZ,YEATS4,CCT2,FRS2,CPSF6,LRRC10,MIR1279,MIR3913-2,MIR3913-1,	0	[CPSF6]	
25	13	73474838	74353046	73808844	73814441	73717145	73872614	0	[KLF5]	0	[KLF5]	
26	13	30891220	35938256	31922220	31989640	30889156	34416156	21	ALOX5AP,BRCA2,HMGB1,RFC3,KL,FRY,USPL1,N4BP2L2,HSPH1,PDS5B,C13orf33,STARD13,N4BP2L1,CG030,RXFP2,TEX26,B3GALTL,EEF1DP3,ZAR1L,LINC00426,TEX26-AS1,	0	[B3GALTL]	
27	15	88368060	101884307	91075129	91145621	90778486	91221307	7	IQGAP1,GABARAPL3,NGRN,CRTC3,ZNF774,C15orf58,TTLL13,	1	CRTC3,	
28	17	34923042	40304509	37861388	37861388	37855834	37875909	1	ERBB2,	1	ERBB2,	
29	18	18697629	22363082	19629239	19667074	19598429	19789487	1	GATA6,	0	[GATA6]	
30	19	28240494	35738283	30307098	30308200	30289536	30358072	1	CCNE1,	1	CCNE1,	
31	19	7304492	7404352	7304492	7344986	7300055	7397015	0	[INSR]	0	[INSR]	
32	20	41617133	58967245	52341686	52374225	52151185	52552586	2	ZNF217,SUMO1P1,	0	[SUMO1P1]	
33	X	138394610	154905589	142176169	142195083	139720974	154905589	196	hsa-mir-1184-3,hsa-mir-1184-2,hsa-mir-1184-1,hsa-mir-718,hsa-mir-105-2,hsa-mir-452,hsa-mir-4330,hsa-mir-2114,hsa-mir-514-3,hsa-mir-513c,hsa-mir-891a,hsa-mir-891b,hsa-mir-320d-2,ABCD1,ARHGAP4,ATP2B3,ATP6AP1,AVPR2,BGN,CDR1,CETN2,CLIC2,CNGA2,CTAG1B,TEX28,DKC1,DNASE1L1,DUSP9,EMD,F8,FLNA,FMR1,AFF2,G6PD,GABRA3,GABRE,OPN1MW,GDI1,HCFC1,HMGB3,IDH3G,IDS,IL9R,IRAK1,L1CAM,MAGEA1,MAGEA2,MAGEA3,MAGEA4,MAGEA5,MAGEA6,MAGEA8,MAGEA9,MAGEA10,MAGEA11,MAGEA12,MECP2,MPP1,MTCP1,MTM1,PLXNB3,OPN1LW,RENBP,RPL10,SLC6A8,SSR4,VAMP7,TAZ,VBP1,ZNF185,NAA10,F8A1,UBL4A,TMEM187,LAGE3,SLC10A3,TKTL1,IKBKG,MTMR1,FAM50A,CXorf1,GPR50,MAGEC1,MAMLD1,BCAP31,SPRY3,ZNF275,TREX2,LDOC1,SRPK3,SNORA70,PNMA3,SPANXA1,CTAG2,NSDHL,MAGEC2,TMLHE,PLXNA3,HAUS7,GABRQ,PDZD4,FAM3A,SPANXD,SPANXC,FUNDC2,PRRG3,BRCC3,CD99L2,H2AFB3,TMEM185A,SLITRK2,PNMA6A,FATE1,CXorf40A,FAM58A,PNMA5,RAB39B,SLITRK4,SPANXN3,MAGEC3,PASD1,GAB3,PNCK,ZFP92,CSAG1,FMR1NB,SPANXE,SPANXF1,VMA21,CTAG1A,MAGEA2B,RP1-177G6.2,LINC00204B,UBE2NL,CSAG3,MIR105-1,MIR105-2,SPANXN4,H2AFB2,H2AFB1,F8A2,F8A3,SPANXN1,SPANXN2,CXorf40B,MIR452,MIR506,MIR507,MIR508,MIR509-1,MIR510,MIR514A1,MIR514A2,MIR514A3,SPANXA2-OT1,SNORA36A,SNORA56,MAGEA9B,OPN1MW2,CSAG2,SPANXB1,SPANXA2,MIR767,FMR1-AS1,MIR509-2,MIR890,MIR891B,MIR888,MIR892B,MIR509-3,MIR891A,MIR892A,CXorf51A,HSFX2,LOC100131434,CXorf68,LINC00204A,CXorf51B,SPANXB2,MTCP1NB,LOC100272228,PNMA6C,PNMA6D,MIR1184-1,MIR320D2,MIR718,MIR2114,MIR514B,MIR3202-2,MIR4330,MIR1184-3,MIR1184-2,MIR3202-1,HSFX1,LOC100507404,MAGEA10-MAGEA5,	0	[SPANXN4]	
