
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/UCEC-TP/8101514/UCEC-TP.meth.by_max_stddev.data.txt", "-u10069", "-oUCEC-TP")
Cluster size 10069 broken into 5071 4998 
Cluster size 5071 broken into 2867 2204 
Cluster size 2867 broken into 1345 1522 
Done cluster 1345 
Cluster size 1522 broken into 548 974 
Done cluster 548 
Done cluster 974 
Done cluster 1522 
Done cluster 2867 
Cluster size 2204 broken into 1082 1122 
Done cluster 1082 
Done cluster 1122 
Done cluster 2204 
Done cluster 5071 
Cluster size 4998 broken into 2551 2447 
Cluster size 2551 broken into 1171 1380 
Done cluster 1171 
Done cluster 1380 
Done cluster 2551 
Cluster size 2447 broken into 982 1465 
Done cluster 982 
Done cluster 1465 
Done cluster 2447 
Done cluster 4998 
> q(save="no")
