name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-A4-7286-01A-11D-2136-08	62	60	2	43	3.225806e-02	exome+100bp flanks	2	35954526	...	17	37	57	4.728195e-07	1.029078e-06	1.585336e-06	-5.799879e+00	...	3	32222401	...	9.310293e-08
TCGA-A4-7287-01A-11D-2136-08	78	75	3	58	3.846154e-02	exome+100bp flanks	2	35954526	...	17	52	72	4.728195e-07	1.446271e-06	2.002530e-06	-5.698421e+00	...	3	32222401	...	9.310293e-08
TCGA-A4-7288-01A-11D-2136-08	111	111	0	88	0	coding only	1	28827810	...	21	75	105	7.284632e-07	2.601654e-06	3.642316e-06	-5.438622e+00	...	9	28771619	...	3.128083e-07
TCGA-A4-7583-01A-11D-2136-08	974	957	17	713	1.745380e-02	coding only	1	28827810	...	226	683	920	7.839652e-06	2.369240e-05	3.191363e-05	-4.496024e+00	...	9	28771619	...	3.128083e-07
TCGA-A4-7584-01A-11D-2136-08	102	94	8	75	7.843137e-02	exome+100bp flanks	2	35954526	...	16	60	85	4.450066e-07	1.668775e-06	2.364097e-06	-5.626335e+00	...	9	32222401	...	2.793088e-07
TCGA-A4-7585-01A-11D-2136-08	128	120	8	98	6.250000e-02	exome+100bp flanks	2	35954526	...	22	81	117	6.118840e-07	2.252846e-06	3.254110e-06	-5.487568e+00	...	14	32222401	...	4.344803e-07
TCGA-A4-7732-01A-11D-2136-08	93	85	8	75	8.602151e-02	exome+100bp flanks	2	35954526	...	10	61	80	2.781291e-07	1.696588e-06	2.225033e-06	-5.652664e+00	...	9	32222401	...	2.793088e-07
TCGA-A4-7734-01A-11D-2136-08	97	91	6	64	6.185567e-02	exome+100bp flanks	2	35954526	...	23	53	84	6.396969e-07	1.474084e-06	2.336284e-06	-5.631474e+00	...	8	32222401	...	2.482745e-07
TCGA-A4-7828-01A-11D-2136-08	74	72	2	56	2.702703e-02	coding only	1	28827810	...	15	44	66	5.203309e-07	1.526304e-06	2.289456e-06	-5.640268e+00	...	7	28771619	...	2.432953e-07
TCGA-A4-7915-01A-11D-2201-08	62	61	1	46	1.612903e-02	coding only	1	28827810	...	15	42	60	5.203309e-07	1.456926e-06	2.081324e-06	-5.681660e+00	...	3	28771619	...	1.042694e-07
TCGA-A4-7996-01A-11D-2201-08	116	114	2	86	1.724138e-02	coding only	1	28827810	...	26	66	110	9.019069e-07	2.289456e-06	3.815760e-06	-5.418419e+00	...	18	28771619	...	6.256165e-07
TCGA-A4-7997-01A-11D-2201-08	115	107	8	81	6.956522e-02	exome+100bp flanks	2	35954526	...	26	74	106	7.231357e-07	2.058155e-06	2.948168e-06	-5.530448e+00	...	6	32222401	...	1.862059e-07
TCGA-A4-8098-01A-11D-2396-08	151	146	5	109	3.311258e-02	exome+100bp flanks	2	35954526	...	35	89	140	9.734519e-07	2.475349e-06	3.893807e-06	-5.409626e+00	...	15	32222401	...	4.655147e-07
TCGA-A4-8310-01A-11D-2396-08	122	114	8	86	6.557377e-02	exome+100bp flanks	2	35954526	...	26	74	106	7.231357e-07	2.058155e-06	2.948168e-06	-5.530448e+00	...	6	32222401	...	1.862059e-07
TCGA-A4-8311-01A-11D-2396-08	97	92	5	64	5.154639e-02	exome+100bp flanks	2	35954526	...	27	56	89	7.509486e-07	1.557523e-06	2.475349e-06	-5.606364e+00	...	6	32222401	...	1.862059e-07
TCGA-A4-8312-01A-11D-2396-08	52	51	1	39	1.923077e-02	coding only	1	28827810	...	11	36	48	3.815760e-07	1.248794e-06	1.665059e-06	-5.778570e+00	...	1	28771619	...	3.475647e-08
TCGA-A4-8515-01A-11D-2396-08	98	93	5	74	5.102041e-02	exome+100bp flanks	2	35954526	...	19	54	90	5.284453e-07	1.501897e-06	2.503162e-06	-5.601511e+00	...	17	32222401	...	5.275833e-07
TCGA-A4-8517-01A-11D-2396-08	105	101	4	73	3.809524e-02	exome+100bp flanks	2	35954526	...	27	56	95	7.509486e-07	1.557523e-06	2.642226e-06	-5.578030e+00	...	12	32222401	...	3.724117e-07
TCGA-A4-8518-01A-11D-2396-08	98	94	4	72	4.081633e-02	exome+100bp flanks	2	35954526	...	22	70	94	6.118840e-07	1.946904e-06	2.614414e-06	-5.582626e+00	...	1	32222401	...	3.103431e-08
TCGA-A4-8630-01A-11D-2396-08	100	96	4	70	4.000000e-02	exome+100bp flanks	2	35954526	...	25	59	90	6.953228e-07	1.640962e-06	2.503162e-06	-5.601511e+00	...	6	32222401	...	1.862059e-07
TCGA-A4-A48D-01A-11D-A25F-10	160	149	11	114	6.875000e-02	exome+100bp flanks	2	35954526	...	32	88	139	8.900131e-07	2.447536e-06	3.865995e-06	-5.412739e+00	...	19	32222401	...	5.896519e-07
TCGA-A4-A4ZT-01A-11D-A26P-10	80	75	5	65	6.250000e-02	exome+100bp flanks	2	35954526	...	10	44	65	2.781291e-07	1.223768e-06	1.807839e-06	-5.742840e+00	...	10	32222401	...	3.103431e-07
TCGA-A4-A57E-01A-11D-A26P-10	118	116	2	91	1.694915e-02	coding only	1	28827810	...	22	67	105	7.631520e-07	2.324145e-06	3.642316e-06	-5.438622e+00	...	16	28771619	...	5.561036e-07
TCGA-A4-A5DU-01A-11D-A28G-10	60	55	5	42	8.333333e-02	exome+100bp flanks	2	35954526	...	13	34	51	3.615678e-07	9.456389e-07	1.418458e-06	-5.848183e+00	...	4	32222401	...	1.241372e-07
TCGA-A4-A5XZ-01A-11D-A31X-10	97	90	7	69	7.216495e-02	exome+100bp flanks	2	35954526	...	21	53	82	5.840711e-07	1.474084e-06	2.280659e-06	-5.641940e+00	...	8	32222401	...	2.482745e-07
TCGA-A4-A5Y0-01A-11D-A31X-10	101	88	13	77	1.287129e-01	exome+100bp flanks	2	35954526	...	10	59	83	2.781291e-07	1.640962e-06	2.308472e-06	-5.636675e+00	...	13	32222401	...	4.034460e-07
TCGA-A4-A5Y1-01A-11D-A28G-10	121	112	9	87	7.438017e-02	exome+100bp flanks	2	35954526	...	24	72	106	6.675098e-07	2.002530e-06	2.948168e-06	-5.530448e+00	...	10	32222401	...	3.103431e-07
TCGA-A4-A6HP-01A-11D-A31X-10	142	136	6	101	4.225352e-02	exome+100bp flanks	2	35954526	...	32	80	123	8.900131e-07	2.225033e-06	3.420988e-06	-5.465848e+00	...	11	32222401	...	3.413774e-07
TCGA-AL-3466-01A-01D-1252-08	83	83	0	63	0	coding only	1	28827810	...	16	55	75	5.550196e-07	1.907880e-06	2.601654e-06	-5.584750e+00	...	4	28771619	...	1.390259e-07
TCGA-AL-3467-01A-01D-1252-08	49	48	1	39	2.040816e-02	exome+100bp flanks	2	35954526	...	9	34	45	2.503162e-07	9.456389e-07	1.251581e-06	-5.902541e+00	...	2	32222401	...	6.206862e-08
TCGA-AL-3468-01A-01D-1252-08	140	134	6	102	4.285714e-02	exome+100bp flanks	2	35954526	...	32	86	132	8.900131e-07	2.391910e-06	3.671304e-06	-5.435180e+00	...	13	32222401	...	4.034460e-07
TCGA-AL-3472-01A-01D-1252-08	93	92	1	69	1.075269e-02	coding only	1	28827810	...	22	56	87	7.631520e-07	1.942569e-06	3.017919e-06	-5.520292e+00	...	9	28771619	...	3.128083e-07
TCGA-AL-3473-01A-01D-1252-08	100	97	3	75	3.000000e-02	exome+100bp flanks	2	35954526	...	22	59	92	6.118840e-07	1.640962e-06	2.558788e-06	-5.591966e+00	...	11	32222401	...	3.413774e-07
TCGA-AL-7173-01A-11D-2136-08	95	92	3	74	3.157895e-02	exome+100bp flanks	2	35954526	...	16	66	88	4.450066e-07	1.835652e-06	2.447536e-06	-5.611271e+00	...	6	32222401	...	1.862059e-07
TCGA-AL-A5DJ-01A-11D-A26P-10	51	48	3	34	5.882353e-02	exome+100bp flanks	2	35954526	...	14	29	45	3.893807e-07	8.065744e-07	1.251581e-06	-5.902541e+00	...	2	32222401	...	6.206862e-08
TCGA-AT-A5NU-01A-11D-A28G-10	120	108	12	84	1.000000e-01	exome+100bp flanks	2	35954526	...	22	66	100	6.118840e-07	1.835652e-06	2.781291e-06	-5.555754e+00	...	12	32222401	...	3.724117e-07
TCGA-B1-5398-01A-02D-1589-08	147	143	4	101	2.721088e-02	coding only	1	28827810	...	40	88	139	1.387549e-06	3.052608e-06	4.821733e-06	-5.316797e+00	...	11	28771619	...	3.823212e-07
TCGA-B1-A47M-01A-11D-A25F-10	133	125	8	97	6.015038e-02	exome+100bp flanks	2	35954526	...	28	72	120	7.787615e-07	2.002530e-06	3.337549e-06	-5.476572e+00	...	19	32222401	...	5.896519e-07
TCGA-B1-A47N-01A-11D-A25F-10	67	60	7	41	1.044776e-01	exome+100bp flanks	2	35954526	...	17	36	54	4.728195e-07	1.001265e-06	1.501897e-06	-5.823360e+00	...	1	32222401	...	3.103431e-08
TCGA-B1-A47O-01A-11D-A25F-10	54	54	0	38	0	coding only	1	28827810	...	16	31	50	5.550196e-07	1.075351e-06	1.734436e-06	-5.760842e+00	...	3	28771619	...	1.042694e-07
TCGA-B1-A654-01A-11D-A31X-10	99	91	8	72	8.080808e-02	exome+100bp flanks	2	35954526	...	16	59	85	4.450066e-07	1.640962e-06	2.364097e-06	-5.626335e+00	...	10	32222401	...	3.103431e-07
TCGA-B1-A655-01A-11D-A31Z-10	132	124	8	94	6.060606e-02	exome+100bp flanks	2	35954526	...	28	68	113	7.787615e-07	1.891278e-06	3.142859e-06	-5.502675e+00	...	16	32222401	...	4.965490e-07
TCGA-B1-A656-01A-11D-A31X-10	178	164	14	129	7.865169e-02	exome+100bp flanks	2	35954526	...	34	106	160	9.456389e-07	2.948168e-06	4.450066e-06	-5.351634e+00	...	20	32222401	...	6.206862e-07
TCGA-B1-A657-01A-11D-A31X-10	121	116	5	85	4.132231e-02	exome+100bp flanks	2	35954526	...	29	67	107	8.065744e-07	1.863465e-06	2.975981e-06	-5.526370e+00	...	11	32222401	...	3.413774e-07
TCGA-B3-3925-01A-01D-1458-08	97	90	7	69	7.216495e-02	exome+100bp flanks	2	35954526	...	20	57	85	5.562582e-07	1.585336e-06	2.364097e-06	-5.626335e+00	...	8	32222401	...	2.482745e-07
TCGA-B3-3926-01A-01D-1252-08	39	37	2	28	5.128205e-02	exome+100bp flanks	2	35954526	...	9	25	35	2.503162e-07	6.953228e-07	9.734519e-07	-6.011686e+00	...	1	32222401	...	3.103431e-08
TCGA-B3-4103-01A-01D-1458-08	88	86	2	67	2.272727e-02	coding only	1	28827810	...	19	57	83	6.590858e-07	1.977257e-06	2.879164e-06	-5.540734e+00	...	7	28771619	...	2.432953e-07
TCGA-B3-4104-01A-01D-1458-08	130	127	3	96	2.307692e-02	coding only	1	28827810	...	31	94	127	1.075351e-06	3.260740e-06	4.405468e-06	-5.356008e+00	...	2	28771619	...	6.951295e-08
TCGA-B3-8121-01A-21D-2396-08	73	70	3	50	4.109589e-02	exome+100bp flanks	2	35954526	...	19	41	69	5.284453e-07	1.140329e-06	1.919091e-06	-5.716904e+00	...	9	32222401	...	2.793088e-07
TCGA-B9-4113-01A-01D-1252-08	107	104	3	82	2.803738e-02	coding only	1	28827810	...	22	66	102	7.631520e-07	2.289456e-06	3.538250e-06	-5.451211e+00	...	13	28771619	...	4.518341e-07
TCGA-B9-4114-01A-01D-1252-08	135	129	6	103	4.444444e-02	exome+100bp flanks	2	35954526	...	24	89	123	6.675098e-07	2.475349e-06	3.420988e-06	-5.465848e+00	...	10	32222401	...	3.103431e-07
TCGA-B9-4115-01A-01D-1252-08	101	100	1	67	9.900990e-03	coding only	1	28827810	...	32	49	94	1.110039e-06	1.699748e-06	3.260740e-06	-5.486684e+00	...	13	28771619	...	4.518341e-07
TCGA-B9-4116-01A-01D-1252-08	136	134	2	102	1.470588e-02	coding only	1	28827810	...	31	83	131	1.075351e-06	2.879164e-06	4.544223e-06	-5.342540e+00	...	17	28771619	...	5.908600e-07
TCGA-B9-4117-01A-01D-1252-08	327	304	23	245	7.033639e-02	exome+100bp flanks	2	35954526	...	57	199	290	1.585336e-06	5.534769e-06	8.065744e-06	-5.093356e+00	...	34	32222401	...	1.055167e-06
TCGA-B9-4617-01A-01D-1252-08	98	91	7	72	7.142857e-02	exome+100bp flanks	2	35954526	...	16	62	86	4.450066e-07	1.724400e-06	2.391910e-06	-5.621255e+00	...	8	32222401	...	2.482745e-07
TCGA-B9-5155-01A-01D-1589-08	152	145	7	113	4.605263e-02	exome+100bp flanks	2	35954526	...	29	95	135	8.065744e-07	2.642226e-06	3.754743e-06	-5.425420e+00	...	11	32222401	...	3.413774e-07
TCGA-B9-5156-01A-01D-1589-08	116	114	2	92	1.724138e-02	coding only	1	28827810	...	21	78	108	7.284632e-07	2.705721e-06	3.746382e-06	-5.426388e+00	...	9	28771619	...	3.128083e-07
TCGA-B9-7268-01A-11D-2136-08	111	104	7	75	6.306306e-02	exome+100bp flanks	2	35954526	...	27	68	102	7.509486e-07	1.891278e-06	2.836917e-06	-5.547153e+00	...	6	32222401	...	1.862059e-07
TCGA-B9-A44B-01A-11D-A25F-10	188	177	11	139	5.851064e-02	exome+100bp flanks	2	35954526	...	36	102	168	1.001265e-06	2.836917e-06	4.672569e-06	-5.330444e+00	...	28	32222401	...	8.689607e-07
TCGA-B9-A5W7-01A-11D-A31X-10	46	41	5	32	1.086957e-01	exome+100bp flanks	2	35954526	...	7	25	37	1.946904e-07	6.953228e-07	1.029078e-06	-5.987552e+00	...	5	32222401	...	1.551716e-07
TCGA-B9-A5W8-01A-11D-A28G-10	100	96	4	65	4.000000e-02	exome+100bp flanks	2	35954526	...	31	46	93	8.622002e-07	1.279394e-06	2.586601e-06	-5.587271e+00	...	16	32222401	...	4.965490e-07
TCGA-B9-A5W9-01A-11D-A28G-10	107	95	12	75	1.121495e-01	exome+100bp flanks	2	35954526	...	15	59	82	4.171937e-07	1.640962e-06	2.280659e-06	-5.641940e+00	...	8	32222401	...	2.482745e-07
TCGA-B9-A69E-01A-11D-A31X-10	121	108	13	86	1.074380e-01	exome+100bp flanks	2	35954526	...	22	64	100	6.118840e-07	1.780026e-06	2.781291e-06	-5.555754e+00	...	14	32222401	...	4.344803e-07
TCGA-BQ-5875-01A-11D-1589-08	108	104	4	83	3.703704e-02	exome+100bp flanks	2	35954526	...	21	71	103	5.840711e-07	1.974717e-06	2.864730e-06	-5.542916e+00	...	11	32222401	...	3.413774e-07
TCGA-BQ-5876-01A-11D-1589-08	118	114	4	90	3.389831e-02	exome+100bp flanks	2	35954526	...	24	76	108	6.675098e-07	2.113781e-06	3.003794e-06	-5.522330e+00	...	8	32222401	...	2.482745e-07
TCGA-BQ-5877-01A-11D-1589-08	117	109	8	91	6.837607e-02	exome+100bp flanks	2	35954526	...	18	69	104	5.006324e-07	1.919091e-06	2.892543e-06	-5.538720e+00	...	16	32222401	...	4.965490e-07
TCGA-BQ-5878-01A-11D-1589-08	141	138	3	98	2.127660e-02	coding only	1	28827810	...	38	81	131	1.318172e-06	2.809787e-06	4.544223e-06	-5.342540e+00	...	12	28771619	...	4.170777e-07
TCGA-BQ-5879-01A-11D-1589-08	50	49	1	37	2.000000e-02	coding only	1	28827810	...	12	32	46	4.162647e-07	1.110039e-06	1.595681e-06	-5.797054e+00	...	2	28771619	...	6.951295e-08
TCGA-BQ-5880-01A-11D-1589-08	87	84	3	66	3.448276e-02	exome+100bp flanks	2	35954526	...	17	54	81	4.728195e-07	1.501897e-06	2.252846e-06	-5.647269e+00	...	10	32222401	...	3.103431e-07
TCGA-BQ-5881-01A-11D-1589-08	61	61	0	45	0	coding only	1	28827810	...	16	41	58	5.550196e-07	1.422238e-06	2.011946e-06	-5.696384e+00	...	1	28771619	...	3.475647e-08
TCGA-BQ-5882-01A-11D-1589-08	98	94	4	73	4.081633e-02	exome+100bp flanks	2	35954526	...	19	66	90	5.284453e-07	1.835652e-06	2.503162e-06	-5.601511e+00	...	5	32222401	...	1.551716e-07
TCGA-BQ-5883-01A-11D-1589-08	64	61	3	51	4.687500e-02	exome+100bp flanks	2	35954526	...	8	45	56	2.225033e-07	1.251581e-06	1.557523e-06	-5.807566e+00	...	3	32222401	...	9.310293e-08
TCGA-BQ-5884-01A-11D-1589-08	84	81	3	61	3.571429e-02	exome+100bp flanks	2	35954526	...	20	49	76	5.562582e-07	1.362833e-06	2.113781e-06	-5.674940e+00	...	7	32222401	...	2.172402e-07
TCGA-BQ-5885-01A-11D-1589-08	151	143	8	110	5.298013e-02	exome+100bp flanks	2	35954526	...	33	95	138	9.178260e-07	2.642226e-06	3.838182e-06	-5.415874e+00	...	10	32222401	...	3.103431e-07
TCGA-BQ-5886-01A-11D-1589-08	99	98	1	79	1.010101e-02	coding only	1	28827810	...	18	69	91	6.243971e-07	2.393522e-06	3.156674e-06	-5.500770e+00	...	4	28771619	...	1.390259e-07
TCGA-BQ-5887-01A-11D-1961-08	36	33	3	26	8.333333e-02	exome+100bp flanks	2	35954526	...	7	24	32	1.946904e-07	6.675098e-07	8.900131e-07	-6.050604e+00	...	1	32222401	...	3.103431e-08
TCGA-BQ-5888-01A-11D-1589-08	51	49	2	33	3.921569e-02	exome+100bp flanks	2	35954526	...	15	31	47	4.171937e-07	8.622002e-07	1.307207e-06	-5.883656e+00	...	1	32222401	...	3.103431e-08
TCGA-BQ-5889-01A-11D-1589-08	98	91	7	64	7.142857e-02	exome+100bp flanks	2	35954526	...	26	56	88	7.231357e-07	1.557523e-06	2.447536e-06	-5.611271e+00	...	6	32222401	...	1.862059e-07
TCGA-BQ-5890-01A-11D-1589-08	111	109	2	85	1.801802e-02	coding only	1	28827810	...	23	75	102	7.978407e-07	2.601654e-06	3.538250e-06	-5.451211e+00	...	4	28771619	...	1.390259e-07
TCGA-BQ-5891-01A-11D-1589-08	68	66	2	39	2.941176e-02	coding only	1	28827810	...	27	34	63	9.365956e-07	1.179417e-06	2.185390e-06	-5.660471e+00	...	2	28771619	...	6.951295e-08
TCGA-BQ-5892-01A-11D-1589-08	96	92	4	78	4.166667e-02	exome+100bp flanks	2	35954526	...	12	53	83	3.337549e-07	1.474084e-06	2.308472e-06	-5.636675e+00	...	18	32222401	...	5.586176e-07
TCGA-BQ-5893-01A-11D-1589-08	93	87	6	65	6.451613e-02	exome+100bp flanks	2	35954526	...	20	56	79	5.562582e-07	1.557523e-06	2.197220e-06	-5.658126e+00	...	3	32222401	...	9.310293e-08
TCGA-BQ-5894-01A-11D-1589-08	59	57	2	47	3.389831e-02	exome+100bp flanks	2	35954526	...	10	39	52	2.781291e-07	1.084703e-06	1.446271e-06	-5.839750e+00	...	3	32222401	...	9.310293e-08
TCGA-BQ-7044-01A-11D-1961-08	958	935	23	673	2.400835e-02	coding only	1	28827810	...	254	635	902	8.810936e-06	2.202734e-05	3.128923e-05	-4.504605e+00	...	12	28771619	...	4.170777e-07
TCGA-BQ-7045-01A-31D-1961-08	156	147	9	111	5.769231e-02	exome+100bp flanks	2	35954526	...	36	99	148	1.001265e-06	2.753478e-06	4.116311e-06	-5.385492e+00	...	11	32222401	...	3.413774e-07
TCGA-BQ-7046-01A-11D-1961-08	264	259	5	195	1.893939e-02	coding only	1	28827810	...	61	173	242	2.116012e-06	6.001150e-06	8.394672e-06	-5.075996e+00	...	7	28771619	...	2.432953e-07
TCGA-BQ-7048-01A-11D-1961-08	581	569	12	415	2.065404e-02	coding only	1	28827810	...	148	379	539	5.133931e-06	1.314703e-05	1.869722e-05	-4.728223e+00	...	11	28771619	...	3.823212e-07
TCGA-BQ-7049-01A-11D-1961-08	898	875	23	602	2.561247e-02	coding only	1	28827810	...	260	579	844	9.019069e-06	2.008477e-05	2.927728e-05	-4.533469e+00	...	1	28771619	...	3.475647e-08
TCGA-BQ-7050-01A-11D-1961-08	55	53	2	42	3.636364e-02	exome+100bp flanks	2	35954526	...	11	39	52	3.059420e-07	1.084703e-06	1.446271e-06	-5.839750e+00	...	2	32222401	...	6.206862e-08
TCGA-BQ-7051-01A-12D-1961-08	259	250	9	180	3.474903e-02	exome+100bp flanks	2	35954526	...	66	166	242	1.835652e-06	4.616943e-06	6.730724e-06	-5.171938e+00	...	10	32222401	...	3.103431e-07
TCGA-BQ-7053-01A-11D-1961-08	421	408	13	291	3.087886e-02	exome+100bp flanks	2	35954526	...	113	271	392	3.142859e-06	7.537299e-06	1.090266e-05	-4.962468e+00	...	7	32222401	...	2.172402e-07
TCGA-BQ-7055-01A-11D-1961-08	30	28	2	21	6.666667e-02	exome+100bp flanks	2	35954526	...	7	19	27	1.946904e-07	5.284453e-07	7.509486e-07	-6.124390e+00	...	1	32222401	...	3.103431e-08
TCGA-BQ-7056-01A-11D-1961-08	438	421	17	317	3.881279e-02	exome+100bp flanks	2	35954526	...	98	301	401	2.725665e-06	8.371686e-06	1.115298e-05	-4.952609e+00	...	2	32222401	...	6.206862e-08
TCGA-BQ-7058-01A-11D-1961-08	100	95	5	74	5.000000e-02	exome+100bp flanks	2	35954526	...	20	63	92	5.562582e-07	1.752213e-06	2.558788e-06	-5.591966e+00	...	9	32222401	...	2.793088e-07
TCGA-BQ-7059-01A-11D-1961-08	665	649	16	466	2.406015e-02	coding only	1	28827810	...	180	429	623	6.243971e-06	1.488146e-05	2.161108e-05	-4.665324e+00	...	14	28771619	...	4.865906e-07
TCGA-BQ-7060-01A-11D-1961-08	926	909	17	620	1.835853e-02	coding only	1	28827810	...	277	589	874	9.608777e-06	2.043166e-05	3.031795e-05	-4.518300e+00	...	8	28771619	...	2.780518e-07
TCGA-BQ-7061-01A-11D-1961-08	179	177	2	142	1.117318e-02	coding only	1	28827810	...	34	127	168	1.179417e-06	4.405468e-06	5.827706e-06	-5.234502e+00	...	7	28771619	...	2.432953e-07
TCGA-BQ-7062-01A-11D-1961-08	99	94	5	72	5.050505e-02	exome+100bp flanks	2	35954526	...	22	61	88	6.118840e-07	1.696588e-06	2.447536e-06	-5.611271e+00	...	5	32222401	...	1.551716e-07
TCGA-DW-5560-01A-01D-1589-08	78	74	4	54	5.128205e-02	exome+100bp flanks	2	35954526	...	20	47	72	5.562582e-07	1.307207e-06	2.002530e-06	-5.698421e+00	...	5	32222401	...	1.551716e-07
TCGA-DW-5561-01A-01D-1589-08	67	61	6	46	8.955224e-02	exome+100bp flanks	2	35954526	...	15	38	58	4.171937e-07	1.056891e-06	1.613149e-06	-5.792326e+00	...	5	32222401	...	1.551716e-07
TCGA-DW-7834-01A-11D-2136-08	103	101	2	72	1.941748e-02	coding only	1	28827810	...	28	63	94	9.712843e-07	2.185390e-06	3.260740e-06	-5.486684e+00	...	3	28771619	...	1.042694e-07
TCGA-DW-7837-01A-11D-2136-08	326	309	17	227	5.214724e-02	exome+100bp flanks	2	35954526	...	79	211	296	2.197220e-06	5.868524e-06	8.232621e-06	-5.084462e+00	...	4	32222401	...	1.241372e-07
TCGA-DW-7838-01A-11D-2136-08	136	132	4	99	2.941176e-02	coding only	1	28827810	...	32	84	128	1.110039e-06	2.913853e-06	4.440157e-06	-5.352602e+00	...	12	28771619	...	4.170777e-07
TCGA-DW-7839-01A-11D-2136-08	72	66	6	55	8.333333e-02	exome+100bp flanks	2	35954526	...	10	45	63	2.781291e-07	1.251581e-06	1.752213e-06	-5.756413e+00	...	7	32222401	...	2.172402e-07
TCGA-DW-7840-01A-11D-2136-08	128	124	4	95	3.125000e-02	exome+100bp flanks	2	35954526	...	28	81	121	7.787615e-07	2.252846e-06	3.365362e-06	-5.472968e+00	...	11	32222401	...	3.413774e-07
TCGA-DW-7841-01A-11D-2136-08	80	77	3	61	3.750000e-02	exome+100bp flanks	2	35954526	...	16	47	75	4.450066e-07	1.307207e-06	2.085968e-06	-5.680692e+00	...	12	32222401	...	3.724117e-07
TCGA-DW-7842-01A-11D-2136-08	53	50	3	43	5.660377e-02	exome+100bp flanks	2	35954526	...	7	37	46	1.946904e-07	1.029078e-06	1.279394e-06	-5.892996e+00	...	2	32222401	...	6.206862e-08
TCGA-DW-7963-01B-11D-A28G-10	66	64	2	45	3.030303e-02	exome+100bp flanks	2	35954526	...	16	35	56	4.450066e-07	9.734519e-07	1.557523e-06	-5.807566e+00	...	5	32222401	...	1.551716e-07
TCGA-DZ-6131-01A-11D-1961-08	597	576	21	419	3.517588e-02	exome+100bp flanks	2	35954526	...	151	394	549	4.199749e-06	1.095829e-05	1.526929e-05	-4.816181e+00	...	2	32222401	...	6.206862e-08
TCGA-DZ-6132-01A-11D-1961-08	917	895	22	644	2.399128e-02	coding only	1	28827810	...	234	596	854	8.117162e-06	2.067448e-05	2.962417e-05	-4.528354e+00	...	20	28771619	...	6.951295e-07
TCGA-DZ-6133-01A-11D-1961-08	1799	1762	37	1237	2.056698e-02	coding only	1	28827810	...	500	1176	1687	1.734436e-05	4.079394e-05	5.851988e-05	-4.232697e+00	...	10	28771619	...	3.475647e-07
TCGA-DZ-6134-01A-11D-1961-08	71	65	6	45	8.450704e-02	exome+100bp flanks	2	35954526	...	18	39	60	5.006324e-07	1.084703e-06	1.668775e-06	-5.777602e+00	...	3	32222401	...	9.310293e-08
TCGA-DZ-6135-01A-11D-1961-08	216	213	3	142	1.388889e-02	coding only	1	28827810	...	67	133	206	2.324145e-06	4.613601e-06	7.145878e-06	-5.145944e+00	...	4	28771619	...	1.390259e-07
TCGA-EV-5901-01A-11D-1589-08	65	60	5	51	7.692308e-02	exome+100bp flanks	2	35954526	...	8	46	59	2.225033e-07	1.279394e-06	1.640962e-06	-5.784902e+00	...	4	32222401	...	1.241372e-07
TCGA-EV-5902-01A-11D-1589-08	117	111	6	90	5.128205e-02	exome+100bp flanks	2	35954526	...	20	65	102	5.562582e-07	1.807839e-06	2.836917e-06	-5.547153e+00	...	17	32222401	...	5.275833e-07
TCGA-EV-5903-01A-11D-1589-08	148	144	4	117	2.702703e-02	coding only	1	28827810	...	22	96	127	7.631520e-07	3.330118e-06	4.405468e-06	-5.356008e+00	...	8	28771619	...	2.780518e-07
TCGA-F9-A4JJ-01A-11D-A25F-10	63	54	9	40	1.428571e-01	exome+100bp flanks	2	35954526	...	13	36	51	3.615678e-07	1.001265e-06	1.418458e-06	-5.848183e+00	...	2	32222401	...	6.206862e-08
TCGA-G7-6789-01A-11D-1961-08	119	110	9	81	7.563025e-02	exome+100bp flanks	2	35954526	...	28	75	107	7.787615e-07	2.085968e-06	2.975981e-06	-5.526370e+00	...	3	32222401	...	9.310293e-08
TCGA-G7-6790-01A-11D-1961-08	157	151	6	112	3.821656e-02	exome+100bp flanks	2	35954526	...	37	102	147	1.029078e-06	2.836917e-06	4.088498e-06	-5.388436e+00	...	7	32222401	...	2.172402e-07
TCGA-G7-6792-01A-21D-1961-08	133	130	3	88	2.255639e-02	coding only	1	28827810	...	41	81	124	1.422238e-06	2.809787e-06	4.301402e-06	-5.366390e+00	...	2	28771619	...	6.951295e-08
TCGA-G7-6793-01A-11D-1961-08	714	702	12	475	1.680672e-02	coding only	1	28827810	...	221	452	677	7.666208e-06	1.567930e-05	2.348427e-05	-4.629223e+00	...	2	28771619	...	6.951295e-08
TCGA-G7-6795-01A-11D-1961-08	627	611	16	422	2.551834e-02	coding only	1	28827810	...	179	387	578	6.209282e-06	1.342454e-05	2.005008e-05	-4.697884e+00	...	11	28771619	...	3.823212e-07
TCGA-G7-6796-01A-11D-1961-08	385	370	15	265	3.896104e-02	exome+100bp flanks	2	35954526	...	103	253	361	2.864730e-06	7.036666e-06	1.004046e-05	-4.998246e+00	...	4	32222401	...	1.241372e-07
TCGA-G7-6797-01A-11D-1961-08	3311	3228	83	2303	2.506796e-02	coding only	1	28827810	...	890	2185	3089	3.087297e-05	7.579487e-05	1.071535e-04	-3.969994e+00	...	7	28771619	...	2.432953e-07
TCGA-G7-7501-01A-11D-2201-08	68	63	5	48	7.352941e-02	exome+100bp flanks	2	35954526	...	13	41	59	3.615678e-07	1.140329e-06	1.640962e-06	-5.784902e+00	...	4	32222401	...	1.241372e-07
TCGA-G7-7502-01A-11D-2201-08	110	102	8	81	7.272727e-02	exome+100bp flanks	2	35954526	...	20	69	99	5.562582e-07	1.919091e-06	2.753478e-06	-5.560118e+00	...	10	32222401	...	3.103431e-07
TCGA-G7-A4TM-01A-11D-A31X-10	55	53	2	39	3.636364e-02	exome+100bp flanks	2	35954526	...	14	29	50	3.893807e-07	8.065744e-07	1.390646e-06	-5.856784e+00	...	7	32222401	...	2.172402e-07
TCGA-GL-6846-01A-11D-1961-08	425	414	11	301	2.588235e-02	coding only	1	28827810	...	109	283	399	3.781071e-06	9.816909e-06	1.384080e-05	-4.858839e+00	...	6	28771619	...	2.085388e-07
TCGA-GL-7773-01A-11D-2136-08	191	187	4	138	2.094241e-02	coding only	1	28827810	...	47	117	177	1.630370e-06	4.058581e-06	6.139904e-06	-5.211838e+00	...	12	28771619	...	4.170777e-07
TCGA-GL-7966-01A-11D-2201-08	77	75	2	54	2.597403e-02	coding only	1	28827810	...	21	42	72	7.284632e-07	1.456926e-06	2.497588e-06	-5.602479e+00	...	9	28771619	...	3.128083e-07
TCGA-GL-8500-01A-11D-2396-08	126	124	2	95	1.587302e-02	coding only	1	28827810	...	28	75	116	9.712843e-07	2.601654e-06	4.023892e-06	-5.395354e+00	...	13	28771619	...	4.518341e-07
TCGA-GL-A4EM-01A-11D-A25F-10	107	102	5	79	4.672897e-02	exome+100bp flanks	2	35954526	...	20	56	93	5.562582e-07	1.557523e-06	2.586601e-06	-5.587271e+00	...	17	32222401	...	5.275833e-07
TCGA-GL-A59R-01A-11D-A26P-10	126	115	11	89	8.730159e-02	exome+100bp flanks	2	35954526	...	25	66	111	6.953228e-07	1.835652e-06	3.087233e-06	-5.510431e+00	...	18	32222401	...	5.586176e-07
TCGA-GL-A59T-01A-21D-A28G-10	132	123	9	87	6.818182e-02	exome+100bp flanks	2	35954526	...	32	67	114	8.900131e-07	1.863465e-06	3.170672e-06	-5.498849e+00	...	15	32222401	...	4.655147e-07
TCGA-HE-7128-01A-11D-1961-08	901	884	17	636	1.886792e-02	coding only	1	28827810	...	240	600	851	8.325294e-06	2.081324e-05	2.952011e-05	-4.529882e+00	...	8	28771619	...	2.780518e-07
TCGA-HE-7129-01A-11D-1961-08	1060	1033	27	749	2.547170e-02	coding only	1	28827810	...	273	695	973	9.470022e-06	2.410866e-05	3.375213e-05	-4.471699e+00	...	5	28771619	...	1.737824e-07
TCGA-HE-7130-01A-11D-1961-08	936	916	20	667	2.136752e-02	coding only	1	28827810	...	238	638	885	8.255917e-06	2.213141e-05	3.069952e-05	-4.512868e+00	...	7	28771619	...	2.432953e-07
TCGA-HE-A5NF-01A-11D-A26P-10	92	87	5	70	5.434783e-02	exome+100bp flanks	2	35954526	...	17	59	83	4.728195e-07	1.640962e-06	2.308472e-06	-5.636675e+00	...	7	32222401	...	2.172402e-07
TCGA-HE-A5NH-01A-11D-A26P-10	103	99	4	84	3.883495e-02	exome+100bp flanks	2	35954526	...	14	65	91	3.893807e-07	1.807839e-06	2.530975e-06	-5.596712e+00	...	12	32222401	...	3.724117e-07
TCGA-HE-A5NI-01A-11D-A26P-10	146	134	12	100	8.219178e-02	exome+100bp flanks	2	35954526	...	33	72	127	9.178260e-07	2.002530e-06	3.532240e-06	-5.451950e+00	...	22	32222401	...	6.827548e-07
TCGA-HE-A5NJ-01A-11D-A26P-10	91	90	1	74	1.098901e-02	coding only	1	28827810	...	14	64	84	4.856422e-07	2.220078e-06	2.913853e-06	-5.535532e+00	...	6	28771619	...	2.085388e-07
TCGA-HE-A5NK-01A-11D-A26P-10	140	128	12	97	8.571429e-02	exome+100bp flanks	2	35954526	...	29	74	121	8.065744e-07	2.058155e-06	3.365362e-06	-5.472968e+00	...	17	32222401	...	5.275833e-07
TCGA-HE-A5NL-01A-11D-A26P-10	107	100	7	74	6.542056e-02	exome+100bp flanks	2	35954526	...	24	56	93	6.675098e-07	1.557523e-06	2.586601e-06	-5.587271e+00	...	13	32222401	...	4.034460e-07
TCGA-IA-A40U-01A-11D-A25F-10	70	65	5	56	7.142857e-02	exome+100bp flanks	2	35954526	...	8	45	58	2.225033e-07	1.251581e-06	1.613149e-06	-5.792326e+00	...	5	32222401	...	1.551716e-07
TCGA-IA-A40X-01A-11D-A25F-10	47	43	4	36	8.510638e-02	exome+100bp flanks	2	35954526	...	7	30	39	1.946904e-07	8.343873e-07	1.084703e-06	-5.964689e+00	...	2	32222401	...	6.206862e-08
TCGA-IA-A40Y-01A-11D-A25F-10	114	104	10	81	8.771930e-02	exome+100bp flanks	2	35954526	...	22	73	98	6.118840e-07	2.030342e-06	2.725665e-06	-5.564527e+00	...	3	32222401	...	9.310293e-08
TCGA-IZ-8195-01A-31D-2396-08	110	106	4	78	3.636364e-02	exome+100bp flanks	2	35954526	...	25	60	95	6.953228e-07	1.668775e-06	2.642226e-06	-5.578030e+00	...	10	32222401	...	3.103431e-07
TCGA-IZ-8196-01A-11D-2396-08	135	132	3	101	2.222222e-02	coding only	1	28827810	...	29	80	125	1.005973e-06	2.775098e-06	4.336091e-06	-5.362902e+00	...	16	28771619	...	5.561036e-07
TCGA-IZ-A6M8-01A-11D-A31X-10	123	110	13	79	1.056911e-01	exome+100bp flanks	2	35954526	...	30	57	99	8.343873e-07	1.585336e-06	2.753478e-06	-5.560118e+00	...	12	32222401	...	3.724117e-07
TCGA-IZ-A6M9-01A-11D-A31X-10	118	110	8	89	6.779661e-02	exome+100bp flanks	2	35954526	...	20	71	101	5.562582e-07	1.974717e-06	2.809104e-06	-5.551432e+00	...	9	32222401	...	2.793088e-07
TCGA-J7-6720-01A-11D-2136-08	67	64	3	49	4.477612e-02	exome+100bp flanks	2	35954526	...	14	38	62	3.893807e-07	1.056891e-06	1.724400e-06	-5.763362e+00	...	10	32222401	...	3.103431e-07
TCGA-J7-8537-01A-11D-2396-08	76	69	7	56	9.210526e-02	exome+100bp flanks	2	35954526	...	12	42	64	3.337549e-07	1.168142e-06	1.780026e-06	-5.749574e+00	...	10	32222401	...	3.103431e-07
TCGA-KV-A6GD-01A-11D-A31X-10	106	98	8	74	7.547170e-02	exome+100bp flanks	2	35954526	...	24	61	92	6.675098e-07	1.696588e-06	2.558788e-06	-5.591966e+00	...	7	32222401	...	2.172402e-07
TCGA-KV-A6GE-01A-11D-A31X-10	86	82	4	60	4.651163e-02	exome+100bp flanks	2	35954526	...	20	55	79	5.562582e-07	1.529710e-06	2.197220e-06	-5.658126e+00	...	4	32222401	...	1.241372e-07
TCGA-MH-A55W-01A-11D-A26P-10	129	124	5	94	3.875969e-02	exome+100bp flanks	2	35954526	...	29	76	120	8.065744e-07	2.113781e-06	3.337549e-06	-5.476572e+00	...	14	32222401	...	4.344803e-07
TCGA-MH-A55Z-01A-11D-A26P-10	137	129	8	98	5.839416e-02	exome+100bp flanks	2	35954526	...	29	80	121	8.065744e-07	2.225033e-06	3.365362e-06	-5.472968e+00	...	12	32222401	...	3.724117e-07
TCGA-MH-A560-01A-11D-A26P-10	84	80	4	64	4.761905e-02	exome+100bp flanks	2	35954526	...	16	54	76	4.450066e-07	1.501897e-06	2.113781e-06	-5.674940e+00	...	6	32222401	...	1.862059e-07
TCGA-MH-A561-01A-11D-A26P-10	161	149	12	122	7.453416e-02	exome+100bp flanks	2	35954526	...	25	90	136	6.953228e-07	2.503162e-06	3.782556e-06	-5.422215e+00	...	21	32222401	...	6.517205e-07
TCGA-MH-A562-01A-11D-A26P-10	96	91	5	59	5.208333e-02	exome+100bp flanks	2	35954526	...	30	47	84	8.343873e-07	1.307207e-06	2.336284e-06	-5.631474e+00	...	7	32222401	...	2.172402e-07
TCGA-P4-A5E6-01A-11D-A28G-10	136	130	6	100	4.411765e-02	exome+100bp flanks	2	35954526	...	28	83	120	7.787615e-07	2.308472e-06	3.337549e-06	-5.476572e+00	...	9	32222401	...	2.793088e-07
TCGA-P4-A5E7-01A-31D-A28G-10	144	132	12	101	8.333333e-02	exome+100bp flanks	2	35954526	...	29	74	122	8.065744e-07	2.058155e-06	3.393175e-06	-5.469394e+00	...	19	32222401	...	5.896519e-07
TCGA-P4-A5E8-01A-11D-A28G-10	76	71	5	55	6.578947e-02	exome+100bp flanks	2	35954526	...	14	34	67	3.893807e-07	9.456389e-07	1.863465e-06	-5.729679e+00	...	19	32222401	...	5.896519e-07
TCGA-P4-A5EA-01A-11D-A28G-10	129	118	11	91	8.527132e-02	exome+100bp flanks	2	35954526	...	23	55	108	6.396969e-07	1.529710e-06	3.003794e-06	-5.522330e+00	...	30	32222401	...	9.310293e-07
TCGA-P4-A5EB-01A-11D-A28G-10	220	198	22	153	1.000000e-01	exome+100bp flanks	2	35954526	...	45	112	184	1.251581e-06	3.115046e-06	5.117575e-06	-5.290936e+00	...	25	32222401	...	7.758578e-07
TCGA-P4-A5ED-01A-11D-A28G-10	53	50	3	36	5.660377e-02	exome+100bp flanks	2	35954526	...	14	32	48	3.893807e-07	8.900131e-07	1.335020e-06	-5.874512e+00	...	2	32222401	...	6.206862e-08
TCGA-PJ-A5Z8-01A-11D-A28G-10	110	104	6	83	5.454545e-02	exome+100bp flanks	2	35954526	...	19	55	97	5.284453e-07	1.529710e-06	2.697852e-06	-5.568982e+00	...	22	32222401	...	6.827548e-07
TCGA-PJ-A5Z9-01A-11D-A28G-10	96	90	6	67	6.250000e-02	exome+100bp flanks	2	35954526	...	22	59	87	6.118840e-07	1.640962e-06	2.419723e-06	-5.616234e+00	...	5	32222401	...	1.551716e-07
TCGA-Q2-A5QZ-01A-11D-A28G-10	173	159	14	107	8.092486e-02	exome+100bp flanks	2	35954526	...	48	82	146	1.335020e-06	2.280659e-06	4.060685e-06	-5.391401e+00	...	16	32222401	...	4.965490e-07
