This pipeline computes the correlation between significantly recurrent gene mutations and molecular subtypes.
Testing the association between mutation status of 152 genes and 12 molecular subtypes across 976 patients, 49 significant findings detected with P value < 0.05 and Q value < 0.25.
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PIK3CA mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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TP53 mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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CDH1 mutation correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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GATA3 mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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MAP3K1 mutation correlated to 'MRNA_CNMF', 'MRNA_CHIERARCHICAL', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
-
CBFB mutation correlated to 'MRNASEQ_CNMF'.
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MAP2K4 mutation correlated to 'MIRSEQ_MATURE_CNMF'.
Table 1. Get Full Table Overview of the association between mutation status of 152 genes and 12 molecular subtypes. Shown in the table are P values (Q values). Thresholded by P value < 0.05 and Q value < 0.25, 49 significant findings detected.
Clinical Features |
MRNA CNMF |
MRNA CHIERARCHICAL |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nMutated (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
PIK3CA | 316 (32%) | 660 |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
0.00013 (0.207) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
TP53 | 295 (30%) | 681 |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
GATA3 | 97 (10%) | 879 |
1e-05 (0.0163) |
1e-05 (0.0163) |
0.00114 (1.00) |
3e-05 (0.0478) |
0.0158 (1.00) |
0.00012 (0.191) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
CDH1 | 106 (11%) | 870 |
0.00035 (0.554) |
0.00607 (1.00) |
1e-05 (0.0163) |
1e-05 (0.0163) |
0.00852 (1.00) |
0.0194 (1.00) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
1e-05 (0.0163) |
MAP3K1 | 70 (7%) | 906 |
3e-05 (0.0478) |
0.00015 (0.238) |
0.00101 (1.00) |
0.0507 (1.00) |
0.00056 (0.884) |
1e-05 (0.0163) |
0.00021 (0.333) |
6e-05 (0.0955) |
0.00013 (0.207) |
0.00021 (0.333) |
0.00043 (0.68) |
0.0208 (1.00) |
CBFB | 23 (2%) | 953 |
0.0934 (1.00) |
0.216 (1.00) |
0.02 (1.00) |
0.133 (1.00) |
0.111 (1.00) |
0.0811 (1.00) |
3e-05 (0.0478) |
0.00036 (0.57) |
0.0133 (1.00) |
0.00341 (1.00) |
0.0052 (1.00) |
0.00133 (1.00) |
MAP2K4 | 32 (3%) | 944 |
0.0576 (1.00) |
0.00423 (1.00) |
0.0419 (1.00) |
0.047 (1.00) |
0.00234 (1.00) |
0.292 (1.00) |
0.0058 (1.00) |
0.00791 (1.00) |
0.00046 (0.727) |
0.00054 (0.853) |
3e-05 (0.0478) |
0.0016 (1.00) |
RUNX1 | 29 (3%) | 947 |
0.0159 (1.00) |
0.0869 (1.00) |
0.00508 (1.00) |
0.168 (1.00) |
1 (1.00) |
0.299 (1.00) |
0.0478 (1.00) |
0.0299 (1.00) |
0.0134 (1.00) |
0.264 (1.00) |
0.223 (1.00) |
0.316 (1.00) |
PTEN | 35 (4%) | 941 |
0.311 (1.00) |
0.904 (1.00) |
0.548 (1.00) |
0.654 (1.00) |
0.921 (1.00) |
0.975 (1.00) |
0.421 (1.00) |
0.372 (1.00) |
0.763 (1.00) |
0.495 (1.00) |
0.2 (1.00) |
0.949 (1.00) |
ARID1A | 27 (3%) | 949 |
0.303 (1.00) |
0.94 (1.00) |
0.0839 (1.00) |
0.26 (1.00) |
1 (1.00) |
0.243 (1.00) |
0.114 (1.00) |
0.773 (1.00) |
0.227 (1.00) |
0.0708 (1.00) |
0.151 (1.00) |
0.381 (1.00) |
MLL3 | 69 (7%) | 907 |
0.669 (1.00) |
0.154 (1.00) |
0.387 (1.00) |
0.356 (1.00) |
0.638 (1.00) |
0.527 (1.00) |
0.0436 (1.00) |
0.121 (1.00) |
0.0624 (1.00) |
0.364 (1.00) |
0.177 (1.00) |
0.219 (1.00) |
FOXA1 | 23 (2%) | 953 |
0.366 (1.00) |
0.532 (1.00) |
0.0538 (1.00) |
0.0446 (1.00) |
0.894 (1.00) |
0.95 (1.00) |
0.0731 (1.00) |
0.177 (1.00) |
0.134 (1.00) |
0.695 (1.00) |
0.0757 (1.00) |
0.549 (1.00) |
RBMX | 14 (1%) | 962 |
0.385 (1.00) |
0.105 (1.00) |
0.0973 (1.00) |
0.141 (1.00) |
0.556 (1.00) |
0.585 (1.00) |
0.0728 (1.00) |
0.246 (1.00) |
0.615 (1.00) |
0.541 (1.00) |
0.248 (1.00) |
0.628 (1.00) |
TBX3 | 27 (3%) | 949 |
0.576 (1.00) |
0.627 (1.00) |
0.341 (1.00) |
0.375 (1.00) |
0.0828 (1.00) |
0.975 (1.00) |
0.143 (1.00) |
0.388 (1.00) |
0.0983 (1.00) |
0.0855 (1.00) |
0.387 (1.00) |
0.0244 (1.00) |
THEM5 | 11 (1%) | 965 |
0.262 (1.00) |
0.871 (1.00) |
0.259 (1.00) |
0.29 (1.00) |
0.208 (1.00) |
0.122 (1.00) |
0.855 (1.00) |
0.994 (1.00) |
0.721 (1.00) |
0.825 (1.00) |
0.838 (1.00) |
0.484 (1.00) |
RB1 | 19 (2%) | 957 |
0.88 (1.00) |
0.303 (1.00) |
0.0729 (1.00) |
0.118 (1.00) |
0.442 (1.00) |
0.773 (1.00) |
0.186 (1.00) |
0.0279 (1.00) |
0.0507 (1.00) |
0.0312 (1.00) |
0.00831 (1.00) |
0.125 (1.00) |
NF1 | 27 (3%) | 949 |
0.574 (1.00) |
0.804 (1.00) |
0.481 (1.00) |
0.152 (1.00) |
0.937 (1.00) |
0.261 (1.00) |
0.0919 (1.00) |
0.0989 (1.00) |
0.847 (1.00) |
0.87 (1.00) |
0.479 (1.00) |
0.758 (1.00) |
ACTL6B | 10 (1%) | 966 |
0.35 (1.00) |
0.287 (1.00) |
0.0373 (1.00) |
0.287 (1.00) |
0.864 (1.00) |
0.353 (1.00) |
0.667 (1.00) |
0.628 (1.00) |
0.665 (1.00) |
0.754 (1.00) |
0.861 (1.00) |
1 (1.00) |
SPEN | 32 (3%) | 944 |
0.665 (1.00) |
0.789 (1.00) |
0.496 (1.00) |
0.274 (1.00) |
0.943 (1.00) |
0.34 (1.00) |
0.16 (1.00) |
0.168 (1.00) |
0.025 (1.00) |
0.0291 (1.00) |
0.362 (1.00) |
0.0653 (1.00) |
CDKN1B | 10 (1%) | 966 |
0.64 (1.00) |
0.738 (1.00) |
0.203 (1.00) |
0.321 (1.00) |
0.738 (1.00) |
0.441 (1.00) |
0.0825 (1.00) |
0.174 (1.00) |
0.0232 (1.00) |
0.595 (1.00) |
0.331 (1.00) |
0.406 (1.00) |
NCOR1 | 41 (4%) | 935 |
0.74 (1.00) |
0.967 (1.00) |
0.969 (1.00) |
0.646 (1.00) |
0.436 (1.00) |
0.524 (1.00) |
0.656 (1.00) |
0.161 (1.00) |
0.862 (1.00) |
0.301 (1.00) |
1 (1.00) |
0.179 (1.00) |
SF3B1 | 16 (2%) | 960 |
0.845 (1.00) |
0.845 (1.00) |
0.43 (1.00) |
0.0462 (1.00) |
0.451 (1.00) |
0.164 (1.00) |
0.53 (1.00) |
0.709 (1.00) |
0.0447 (1.00) |
0.643 (1.00) |
0.672 (1.00) |
0.28 (1.00) |
ZFP36L1 | 9 (1%) | 967 |
0.403 (1.00) |
0.898 (1.00) |
0.00632 (1.00) |
0.055 (1.00) |
0.0264 (1.00) |
0.231 (1.00) |
0.454 (1.00) |
0.156 (1.00) |
0.532 (1.00) |
0.655 (1.00) |
1 (1.00) |
0.859 (1.00) |
KRAS | 6 (1%) | 970 |
0.54 (1.00) |
0.632 (1.00) |
0.353 (1.00) |
0.258 (1.00) |
0.2 (1.00) |
0.712 (1.00) |
0.315 (1.00) |
0.37 (1.00) |
0.667 (1.00) |
0.642 (1.00) |
0.743 (1.00) |
0.103 (1.00) |
TCP11 | 6 (1%) | 970 |
0.783 (1.00) |
0.512 (1.00) |
0.481 (1.00) |
0.863 (1.00) |
0.919 (1.00) |
0.771 (1.00) |
0.773 (1.00) |
0.887 (1.00) |
0.73 (1.00) |
|||
AQP12A | 6 (1%) | 970 |
0.623 (1.00) |
0.733 (1.00) |
0.281 (1.00) |
0.166 (1.00) |
0.2 (1.00) |
0.134 (1.00) |
0.742 (1.00) |
0.949 (1.00) |
1 (1.00) |
0.287 (1.00) |
1 (1.00) |
0.902 (1.00) |
DLG1 | 13 (1%) | 963 |
0.34 (1.00) |
0.322 (1.00) |
0.594 (1.00) |
0.102 (1.00) |
0.892 (1.00) |
0.0959 (1.00) |
0.0726 (1.00) |
0.136 (1.00) |
0.244 (1.00) |
0.0194 (1.00) |
0.744 (1.00) |
0.431 (1.00) |
MYB | 12 (1%) | 964 |
0.74 (1.00) |
0.0284 (1.00) |
0.266 (1.00) |
0.619 (1.00) |
1 (1.00) |
0.685 (1.00) |
0.901 (1.00) |
0.11 (1.00) |
0.579 (1.00) |
0.784 (1.00) |
0.0538 (1.00) |
0.781 (1.00) |
RPGR | 19 (2%) | 957 |
0.968 (1.00) |
0.703 (1.00) |
0.952 (1.00) |
0.535 (1.00) |
0.743 (1.00) |
0.238 (1.00) |
0.597 (1.00) |
0.57 (1.00) |
0.572 (1.00) |
0.308 (1.00) |
0.768 (1.00) |
0.896 (1.00) |
TBL1XR1 | 10 (1%) | 966 |
0.158 (1.00) |
0.0823 (1.00) |
0.0501 (1.00) |
0.926 (1.00) |
0.448 (1.00) |
0.134 (1.00) |
0.0575 (1.00) |
0.0342 (1.00) |
0.237 (1.00) |
0.393 (1.00) |
0.64 (1.00) |
0.204 (1.00) |
KDM6A | 16 (2%) | 960 |
0.74 (1.00) |
0.344 (1.00) |
0.234 (1.00) |
0.626 (1.00) |
0.639 (1.00) |
0.874 (1.00) |
0.557 (1.00) |
0.477 (1.00) |
0.855 (1.00) |
0.234 (1.00) |
0.144 (1.00) |
0.135 (1.00) |
MYH9 | 18 (2%) | 958 |
0.397 (1.00) |
0.423 (1.00) |
0.207 (1.00) |
0.571 (1.00) |
0.821 (1.00) |
0.0208 (1.00) |
0.445 (1.00) |
0.605 (1.00) |
0.757 (1.00) |
0.91 (1.00) |
0.64 (1.00) |
0.275 (1.00) |
HLA-C | 9 (1%) | 967 |
0.139 (1.00) |
0.85 (1.00) |
0.775 (1.00) |
0.275 (1.00) |
0.398 (1.00) |
0.77 (1.00) |
0.336 (1.00) |
0.38 (1.00) |
0.234 (1.00) |
0.00634 (1.00) |
0.141 (1.00) |
0.112 (1.00) |
RAB42 | 4 (0%) | 972 |
0.405 (1.00) |
0.0698 (1.00) |
0.372 (1.00) |
0.4 (1.00) |
0.496 (1.00) |
0.196 (1.00) |
0.126 (1.00) |
0.218 (1.00) |
0.0108 (1.00) |
|||
FGFR2 | 11 (1%) | 965 |
0.915 (1.00) |
0.878 (1.00) |
0.354 (1.00) |
0.37 (1.00) |
1 (1.00) |
0.917 (1.00) |
0.277 (1.00) |
0.0731 (1.00) |
0.545 (1.00) |
0.6 (1.00) |
0.245 (1.00) |
0.66 (1.00) |
ERBB2 | 21 (2%) | 955 |
0.778 (1.00) |
0.572 (1.00) |
0.0408 (1.00) |
0.0577 (1.00) |
0.551 (1.00) |
0.882 (1.00) |
0.0879 (1.00) |
0.148 (1.00) |
0.00189 (1.00) |
0.332 (1.00) |
0.232 (1.00) |
0.123 (1.00) |
CTCF | 17 (2%) | 959 |
0.0588 (1.00) |
0.0434 (1.00) |
0.00385 (1.00) |
0.0326 (1.00) |
0.0631 (1.00) |
0.126 (1.00) |
0.0228 (1.00) |
0.1 (1.00) |
0.0355 (1.00) |
0.0118 (1.00) |
0.226 (1.00) |
0.215 (1.00) |
ZMYM3 | 14 (1%) | 962 |
0.497 (1.00) |
0.441 (1.00) |
0.915 (1.00) |
0.447 (1.00) |
0.128 (1.00) |
0.284 (1.00) |
0.509 (1.00) |
0.344 (1.00) |
0.584 (1.00) |
1 (1.00) |
1 (1.00) |
0.903 (1.00) |
FRMPD2 | 12 (1%) | 964 |
0.821 (1.00) |
1 (1.00) |
0.6 (1.00) |
0.0963 (1.00) |
0.467 (1.00) |
0.883 (1.00) |
0.538 (1.00) |
0.0378 (1.00) |
0.936 (1.00) |
0.746 (1.00) |
0.395 (1.00) |
0.257 (1.00) |
TFE3 | 7 (1%) | 969 |
0.677 (1.00) |
0.902 (1.00) |
0.673 (1.00) |
0.643 (1.00) |
1 (1.00) |
0.548 (1.00) |
0.626 (1.00) |
0.404 (1.00) |
0.5 (1.00) |
0.0238 (1.00) |
0.512 (1.00) |
0.649 (1.00) |
GPS2 | 11 (1%) | 965 |
0.0137 (1.00) |
0.0478 (1.00) |
0.0603 (1.00) |
0.342 (1.00) |
0.265 (1.00) |
0.746 (1.00) |
0.159 (1.00) |
0.0952 (1.00) |
0.405 (1.00) |
0.633 (1.00) |
1 (1.00) |
0.207 (1.00) |
DOCK11 | 20 (2%) | 956 |
0.667 (1.00) |
0.448 (1.00) |
0.276 (1.00) |
0.426 (1.00) |
0.363 (1.00) |
0.0652 (1.00) |
0.26 (1.00) |
0.0176 (1.00) |
0.504 (1.00) |
0.016 (1.00) |
0.0407 (1.00) |
0.167 (1.00) |
HRNR | 31 (3%) | 945 |
0.988 (1.00) |
0.782 (1.00) |
0.143 (1.00) |
0.747 (1.00) |
0.592 (1.00) |
0.72 (1.00) |
0.987 (1.00) |
0.702 (1.00) |
0.484 (1.00) |
0.217 (1.00) |
0.908 (1.00) |
0.52 (1.00) |
CASZ1 | 14 (1%) | 962 |
0.937 (1.00) |
0.855 (1.00) |
0.971 (1.00) |
0.529 (1.00) |
0.111 (1.00) |
0.938 (1.00) |
0.98 (1.00) |
0.699 (1.00) |
0.941 (1.00) |
0.863 (1.00) |
0.92 (1.00) |
0.958 (1.00) |
CDC42EP1 | 5 (1%) | 971 |
0.52 (1.00) |
0.463 (1.00) |
0.513 (1.00) |
0.259 (1.00) |
1 (1.00) |
0.584 (1.00) |
0.254 (1.00) |
0.555 (1.00) |
0.612 (1.00) |
0.0843 (1.00) |
||
C1QTNF5 | 7 (1%) | 969 |
0.647 (1.00) |
0.199 (1.00) |
0.508 (1.00) |
0.645 (1.00) |
0.711 (1.00) |
0.529 (1.00) |
0.285 (1.00) |
0.303 (1.00) |
0.00993 (1.00) |
0.261 (1.00) |
0.124 (1.00) |
|
TGS1 | 13 (1%) | 963 |
0.634 (1.00) |
0.666 (1.00) |
0.443 (1.00) |
0.248 (1.00) |
0.114 (1.00) |
0.709 (1.00) |
0.756 (1.00) |
0.0796 (1.00) |
0.193 (1.00) |
0.155 (1.00) |
0.802 (1.00) |
0.0866 (1.00) |
USP36 | 8 (1%) | 968 |
0.837 (1.00) |
0.183 (1.00) |
1 (1.00) |
1 (1.00) |
0.714 (1.00) |
0.315 (1.00) |
0.554 (1.00) |
0.128 (1.00) |
0.904 (1.00) |
0.363 (1.00) |
1 (1.00) |
0.902 (1.00) |
ASB10 | 8 (1%) | 968 |
0.944 (1.00) |
0.0647 (1.00) |
1 (1.00) |
0.5 (1.00) |
0.763 (1.00) |
0.828 (1.00) |
0.106 (1.00) |
0.222 (1.00) |
0.862 (1.00) |
0.643 (1.00) |
||
EIF4A2 | 9 (1%) | 967 |
0.234 (1.00) |
1 (1.00) |
0.884 (1.00) |
0.229 (1.00) |
1 (1.00) |
0.188 (1.00) |
0.0391 (1.00) |
0.0699 (1.00) |
0.763 (1.00) |
0.212 (1.00) |
0.592 (1.00) |
0.184 (1.00) |
DNAH12 | 18 (2%) | 958 |
1 (1.00) |
0.734 (1.00) |
0.627 (1.00) |
0.41 (1.00) |
0.453 (1.00) |
0.879 (1.00) |
0.156 (1.00) |
0.926 (1.00) |
0.715 (1.00) |
0.697 (1.00) |
0.287 (1.00) |
0.253 (1.00) |
RHBG | 4 (0%) | 972 |
0.829 (1.00) |
0.188 (1.00) |
0.17 (1.00) |
0.492 (1.00) |
0.281 (1.00) |
0.291 (1.00) |
0.505 (1.00) |
|||||
PAX2 | 4 (0%) | 972 |
0.945 (1.00) |
0.335 (1.00) |
0.371 (1.00) |
0.296 (1.00) |
0.379 (1.00) |
0.318 (1.00) |
0.254 (1.00) |
0.0978 (1.00) |
0.943 (1.00) |
|||
FXYD5 | 5 (1%) | 971 |
0.564 (1.00) |
0.787 (1.00) |
0.567 (1.00) |
0.642 (1.00) |
1 (1.00) |
0.178 (1.00) |
0.484 (1.00) |
0.337 (1.00) |
0.398 (1.00) |
|||
BCORL1 | 15 (2%) | 961 |
0.149 (1.00) |
0.833 (1.00) |
0.542 (1.00) |
0.172 (1.00) |
0.29 (1.00) |
0.00796 (1.00) |
0.447 (1.00) |
0.331 (1.00) |
0.303 (1.00) |
0.872 (1.00) |
0.381 (1.00) |
0.641 (1.00) |
ZNF362 | 5 (1%) | 971 |
0.881 (1.00) |
0.871 (1.00) |
0.103 (1.00) |
0.153 (1.00) |
0.744 (1.00) |
0.409 (1.00) |
0.0502 (1.00) |
0.237 (1.00) |
0.0464 (1.00) |
|||
PTHLH | 7 (1%) | 969 |
0.229 (1.00) |
0.897 (1.00) |
0.0132 (1.00) |
0.181 (1.00) |
0.69 (1.00) |
0.678 (1.00) |
0.0489 (1.00) |
0.646 (1.00) |
0.16 (1.00) |
0.595 (1.00) |
||
GPRIN2 | 11 (1%) | 965 |
0.602 (1.00) |
0.627 (1.00) |
0.887 (1.00) |
0.64 (1.00) |
0.877 (1.00) |
0.0416 (1.00) |
0.789 (1.00) |
0.233 (1.00) |
0.783 (1.00) |
0.0682 (1.00) |
0.588 (1.00) |
0.22 (1.00) |
ANKRD12 | 18 (2%) | 958 |
0.277 (1.00) |
0.132 (1.00) |
0.563 (1.00) |
0.875 (1.00) |
0.385 (1.00) |
0.121 (1.00) |
0.19 (1.00) |
0.0329 (1.00) |
0.655 (1.00) |
0.934 (1.00) |
1 (1.00) |
0.538 (1.00) |
ZNF687 | 11 (1%) | 965 |
0.342 (1.00) |
0.129 (1.00) |
0.347 (1.00) |
0.132 (1.00) |
0.13 (1.00) |
0.0863 (1.00) |
0.0397 (1.00) |
0.131 (1.00) |
0.224 (1.00) |
0.0335 (1.00) |
0.525 (1.00) |
0.523 (1.00) |
KCNN3 | 9 (1%) | 967 |
0.145 (1.00) |
0.509 (1.00) |
0.216 (1.00) |
0.0979 (1.00) |
0.325 (1.00) |
0.829 (1.00) |
0.0756 (1.00) |
0.156 (1.00) |
0.259 (1.00) |
0.579 (1.00) |
0.279 (1.00) |
0.527 (1.00) |
ICOSLG | 5 (1%) | 971 |
0.769 (1.00) |
0.131 (1.00) |
0.0072 (1.00) |
0.517 (1.00) |
0.822 (1.00) |
0.767 (1.00) |
0.287 (1.00) |
0.825 (1.00) |
||||
PIK3R1 | 15 (2%) | 961 |
0.147 (1.00) |
0.185 (1.00) |
0.646 (1.00) |
0.239 (1.00) |
0.632 (1.00) |
0.0117 (1.00) |
0.13 (1.00) |
0.071 (1.00) |
0.0204 (1.00) |
0.347 (1.00) |
0.138 (1.00) |
0.725 (1.00) |
MR1 | 7 (1%) | 969 |
0.213 (1.00) |
0.703 (1.00) |
0.894 (1.00) |
0.346 (1.00) |
1 (1.00) |
1 (1.00) |
0.432 (1.00) |
0.641 (1.00) |
0.645 (1.00) |
0.221 (1.00) |
0.288 (1.00) |
0.796 (1.00) |
CABYR | 6 (1%) | 970 |
0.904 (1.00) |
0.34 (1.00) |
0.0131 (1.00) |
0.00028 (0.444) |
0.525 (1.00) |
0.227 (1.00) |
0.0368 (1.00) |
0.0992 (1.00) |
||||
AKT2 | 5 (1%) | 971 |
0.141 (1.00) |
1 (1.00) |
0.623 (1.00) |
0.243 (1.00) |
0.118 (1.00) |
0.216 (1.00) |
0.0661 (1.00) |
0.691 (1.00) |
0.291 (1.00) |
0.842 (1.00) |
||
ZBTB7C | 5 (1%) | 971 |
0.46 (1.00) |
0.8 (1.00) |
0.88 (1.00) |
0.49 (1.00) |
0.741 (1.00) |
0.397 (1.00) |
0.779 (1.00) |
0.945 (1.00) |
||||
RIBC1 | 4 (0%) | 972 |
0.591 (1.00) |
0.379 (1.00) |
0.461 (1.00) |
0.0537 (1.00) |
0.706 (1.00) |
1 (1.00) |
0.395 (1.00) |
0.845 (1.00) |
||||
CEP57 | 6 (1%) | 970 |
0.374 (1.00) |
0.276 (1.00) |
0.104 (1.00) |
0.198 (1.00) |
0.143 (1.00) |
0.751 (1.00) |
0.0675 (1.00) |
0.517 (1.00) |
0.0604 (1.00) |
0.174 (1.00) |
||
TARBP2 | 6 (1%) | 970 |
0.662 (1.00) |
0.959 (1.00) |
0.107 (1.00) |
0.649 (1.00) |
0.167 (1.00) |
0.273 (1.00) |
0.508 (1.00) |
0.438 (1.00) |
0.134 (1.00) |
0.32 (1.00) |
0.196 (1.00) |
0.0108 (1.00) |
OXCT2 | 4 (0%) | 972 |
0.447 (1.00) |
0.543 (1.00) |
0.829 (1.00) |
0.933 (1.00) |
0.373 (1.00) |
1 (1.00) |
0.297 (1.00) |
|||||
ANKRD20A4 | 7 (1%) | 969 |
0.192 (1.00) |
0.0963 (1.00) |
0.802 (1.00) |
0.877 (1.00) |
0.779 (1.00) |
0.656 (1.00) |
0.0838 (1.00) |
0.0794 (1.00) |
1 (1.00) |
0.61 (1.00) |
0.636 (1.00) |
0.513 (1.00) |
HIST1H3B | 11 (1%) | 965 |
0.552 (1.00) |
0.958 (1.00) |
0.661 (1.00) |
0.663 (1.00) |
0.632 (1.00) |
0.659 (1.00) |
0.254 (1.00) |
0.429 (1.00) |
0.807 (1.00) |
0.549 (1.00) |
0.88 (1.00) |
0.954 (1.00) |
MED23 | 14 (1%) | 962 |
0.0975 (1.00) |
0.284 (1.00) |
0.183 (1.00) |
0.0421 (1.00) |
0.155 (1.00) |
0.677 (1.00) |
0.138 (1.00) |
0.00209 (1.00) |
0.0429 (1.00) |
0.201 (1.00) |
0.12 (1.00) |
0.547 (1.00) |
MUC6 | 14 (1%) | 962 |
0.0203 (1.00) |
0.608 (1.00) |
0.5 (1.00) |
0.168 (1.00) |
0.366 (1.00) |
0.984 (1.00) |
0.0597 (1.00) |
0.253 (1.00) |
0.167 (1.00) |
0.0456 (1.00) |
0.191 (1.00) |
0.249 (1.00) |
PSIP1 | 8 (1%) | 968 |
0.69 (1.00) |
0.717 (1.00) |
0.475 (1.00) |
0.875 (1.00) |
0.691 (1.00) |
1 (1.00) |
0.544 (1.00) |
0.828 (1.00) |
0.191 (1.00) |
0.91 (1.00) |
1 (1.00) |
0.296 (1.00) |
PCNXL2 | 21 (2%) | 955 |
0.954 (1.00) |
0.937 (1.00) |
0.623 (1.00) |
0.909 (1.00) |
0.483 (1.00) |
0.323 (1.00) |
0.936 (1.00) |
0.338 (1.00) |
0.644 (1.00) |
0.771 (1.00) |
0.666 (1.00) |
0.516 (1.00) |
SLC35B2 | 7 (1%) | 969 |
1 (1.00) |
0.245 (1.00) |
0.96 (1.00) |
0.558 (1.00) |
0.557 (1.00) |
0.965 (1.00) |
0.829 (1.00) |
0.718 (1.00) |
0.664 (1.00) |
0.862 (1.00) |
0.759 (1.00) |
|
ANGPT4 | 10 (1%) | 966 |
0.202 (1.00) |
1 (1.00) |
0.26 (1.00) |
0.135 (1.00) |
0.517 (1.00) |
0.548 (1.00) |
0.00774 (1.00) |
0.0742 (1.00) |
0.191 (1.00) |
0.378 (1.00) |
0.719 (1.00) |
0.387 (1.00) |
MKL1 | 5 (1%) | 971 |
0.901 (1.00) |
0.685 (1.00) |
0.347 (1.00) |
0.779 (1.00) |
0.0991 (1.00) |
0.652 (1.00) |
0.0645 (1.00) |
0.526 (1.00) |
0.856 (1.00) |
|||
NBPF9 | 5 (1%) | 971 |
0.618 (1.00) |
0.622 (1.00) |
0.809 (1.00) |
0.864 (1.00) |
1 (1.00) |
0.674 (1.00) |
0.198 (1.00) |
0.526 (1.00) |
0.341 (1.00) |
|||
PRICKLE3 | 11 (1%) | 965 |
0.261 (1.00) |
0.0269 (1.00) |
1 (1.00) |
0.0472 (1.00) |
0.511 (1.00) |
0.588 (1.00) |
0.3 (1.00) |
0.34 (1.00) |
0.803 (1.00) |
0.553 (1.00) |
0.521 (1.00) |
0.119 (1.00) |
CCDC82 | 6 (1%) | 970 |
0.46 (1.00) |
0.0582 (1.00) |
0.713 (1.00) |
0.0383 (1.00) |
0.273 (1.00) |
0.335 (1.00) |
0.00539 (1.00) |
0.341 (1.00) |
0.345 (1.00) |
0.107 (1.00) |
0.962 (1.00) |
|
CXCR3 | 6 (1%) | 970 |
0.604 (1.00) |
0.791 (1.00) |
0.181 (1.00) |
0.801 (1.00) |
1 (1.00) |
1 (1.00) |
0.765 (1.00) |
0.618 (1.00) |
0.774 (1.00) |
0.582 (1.00) |
0.833 (1.00) |
0.213 (1.00) |
TPP2 | 8 (1%) | 968 |
0.0876 (1.00) |
0.946 (1.00) |
0.912 (1.00) |
0.675 (1.00) |
0.626 (1.00) |
0.392 (1.00) |
0.608 (1.00) |
0.758 (1.00) |
0.521 (1.00) |
0.941 (1.00) |
||
C15ORF39 | 9 (1%) | 967 |
0.604 (1.00) |
0.51 (1.00) |
0.00585 (1.00) |
0.0156 (1.00) |
0.64 (1.00) |
0.498 (1.00) |
0.0279 (1.00) |
0.00111 (1.00) |
0.0149 (1.00) |
0.0178 (1.00) |
0.00203 (1.00) |
0.00097 (1.00) |
SDC1 | 3 (0%) | 973 |
0.867 (1.00) |
0.338 (1.00) |
0.00824 (1.00) |
0.628 (1.00) |
0.91 (1.00) |
|||||||
CASP8 | 12 (1%) | 964 |
0.467 (1.00) |
0.393 (1.00) |
0.123 (1.00) |
0.342 (1.00) |
0.529 (1.00) |
0.685 (1.00) |
0.177 (1.00) |
0.494 (1.00) |
0.54 (1.00) |
0.457 (1.00) |
0.743 (1.00) |
0.461 (1.00) |
TNRC6B | 18 (2%) | 958 |
0.522 (1.00) |
0.155 (1.00) |
0.286 (1.00) |
0.945 (1.00) |
0.508 (1.00) |
0.417 (1.00) |
0.54 (1.00) |
0.441 (1.00) |
0.792 (1.00) |
0.775 (1.00) |
1 (1.00) |
0.822 (1.00) |
IRS4 | 11 (1%) | 965 |
0.144 (1.00) |
0.781 (1.00) |
0.279 (1.00) |
0.642 (1.00) |
0.382 (1.00) |
0.957 (1.00) |
0.118 (1.00) |
0.364 (1.00) |
0.781 (1.00) |
0.648 (1.00) |
1 (1.00) |
0.902 (1.00) |
RHOA | 6 (1%) | 970 |
0.905 (1.00) |
0.588 (1.00) |
0.857 (1.00) |
0.394 (1.00) |
0.111 (1.00) |
0.282 (1.00) |
0.872 (1.00) |
0.124 (1.00) |
0.777 (1.00) |
0.581 (1.00) |
0.385 (1.00) |
0.403 (1.00) |
TTPAL | 4 (0%) | 972 |
0.238 (1.00) |
0.305 (1.00) |
0.179 (1.00) |
0.645 (1.00) |
0.46 (1.00) |
0.386 (1.00) |
0.326 (1.00) |
0.215 (1.00) |
0.28 (1.00) |
|||
MLL4 | 13 (1%) | 963 |
0.401 (1.00) |
0.511 (1.00) |
0.85 (1.00) |
0.59 (1.00) |
0.131 (1.00) |
0.392 (1.00) |
0.303 (1.00) |
0.222 (1.00) |
0.18 (1.00) |
0.102 (1.00) |
0.126 (1.00) |
0.223 (1.00) |
ATHL1 | 10 (1%) | 966 |
0.871 (1.00) |
0.321 (1.00) |
0.0502 (1.00) |
0.334 (1.00) |
1 (1.00) |
0.708 (1.00) |
1 (1.00) |
0.0287 (1.00) |
0.0853 (1.00) |
0.171 (1.00) |
0.124 (1.00) |
0.197 (1.00) |
TMEM120B | 5 (1%) | 971 |
0.257 (1.00) |
0.251 (1.00) |
0.933 (1.00) |
1 (1.00) |
0.0488 (1.00) |
0.954 (1.00) |
0.74 (1.00) |
0.381 (1.00) |
0.204 (1.00) |
0.59 (1.00) |
||
LILRA6 | 6 (1%) | 970 |
0.658 (1.00) |
0.222 (1.00) |
0.748 (1.00) |
0.207 (1.00) |
0.61 (1.00) |
0.983 (1.00) |
0.964 (1.00) |
1 (1.00) |
0.478 (1.00) |
1 (1.00) |
0.712 (1.00) |
|
MLH1 | 6 (1%) | 970 |
0.797 (1.00) |
0.731 (1.00) |
1 (1.00) |
0.868 (1.00) |
0.716 (1.00) |
0.416 (1.00) |
0.184 (1.00) |
0.802 (1.00) |
1 (1.00) |
0.963 (1.00) |
||
NUP93 | 4 (0%) | 972 |
0.0184 (1.00) |
0.381 (1.00) |
0.0273 (1.00) |
0.594 (1.00) |
0.79 (1.00) |
0.761 (1.00) |
||||||
ALDH1L1 | 9 (1%) | 967 |
0.646 (1.00) |
0.92 (1.00) |
0.338 (1.00) |
0.529 (1.00) |
0.692 (1.00) |
0.51 (1.00) |
0.466 (1.00) |
0.404 (1.00) |
1 (1.00) |
0.366 (1.00) |
0.391 (1.00) |
0.603 (1.00) |
LRIG2 | 7 (1%) | 969 |
0.564 (1.00) |
0.0322 (1.00) |
0.216 (1.00) |
0.613 (1.00) |
0.207 (1.00) |
0.276 (1.00) |
0.317 (1.00) |
0.284 (1.00) |
0.721 (1.00) |
0.974 (1.00) |
0.512 (1.00) |
0.38 (1.00) |
CCDC78 | 5 (1%) | 971 |
0.437 (1.00) |
0.667 (1.00) |
0.654 (1.00) |
0.173 (1.00) |
1 (1.00) |
0.923 (1.00) |
0.74 (1.00) |
0.743 (1.00) |
||||
GAL3ST1 | 5 (1%) | 971 |
0.76 (1.00) |
0.647 (1.00) |
0.47 (1.00) |
0.916 (1.00) |
0.34 (1.00) |
0.961 (1.00) |
0.385 (1.00) |
0.709 (1.00) |
||||
FAM20C | 4 (0%) | 972 |
0.603 (1.00) |
0.853 (1.00) |
0.24 (1.00) |
0.818 (1.00) |
0.643 (1.00) |
0.292 (1.00) |
0.357 (1.00) |
|||||
RCC1 | 3 (0%) | 973 |
0.717 (1.00) |
0.111 (1.00) |
0.197 (1.00) |
0.441 (1.00) |
0.417 (1.00) |
1 (1.00) |
0.402 (1.00) |
|||||
SPTAN1 | 11 (1%) | 965 |
0.787 (1.00) |
0.644 (1.00) |
0.624 (1.00) |
0.784 (1.00) |
0.113 (1.00) |
0.0494 (1.00) |
0.115 (1.00) |
0.122 (1.00) |
0.0927 (1.00) |
0.445 (1.00) |
0.13 (1.00) |
0.265 (1.00) |
CHD4 | 19 (2%) | 957 |
0.231 (1.00) |
0.356 (1.00) |
0.458 (1.00) |
0.0819 (1.00) |
0.195 (1.00) |
0.621 (1.00) |
0.0322 (1.00) |
0.157 (1.00) |
0.167 (1.00) |
0.0908 (1.00) |
0.47 (1.00) |
0.106 (1.00) |
ZFP36L2 | 7 (1%) | 969 |
0.396 (1.00) |
1 (1.00) |
0.0444 (1.00) |
0.543 (1.00) |
1 (1.00) |
1 (1.00) |
0.895 (1.00) |
0.385 (1.00) |
0.804 (1.00) |
0.973 (1.00) |
1 (1.00) |
1 (1.00) |
STAG2 | 13 (1%) | 963 |
0.285 (1.00) |
0.211 (1.00) |
0.216 (1.00) |
0.199 (1.00) |
0.878 (1.00) |
0.202 (1.00) |
0.193 (1.00) |
0.137 (1.00) |
0.22 (1.00) |
0.929 (1.00) |
0.51 (1.00) |
0.845 (1.00) |
HIST1H2BC | 6 (1%) | 970 |
0.374 (1.00) |
0.0461 (1.00) |
0.786 (1.00) |
0.349 (1.00) |
0.392 (1.00) |
0.244 (1.00) |
0.322 (1.00) |
0.553 (1.00) |
0.886 (1.00) |
0.514 (1.00) |
1 (1.00) |
0.443 (1.00) |
BPHL | 5 (1%) | 971 |
0.471 (1.00) |
0.468 (1.00) |
0.686 (1.00) |
0.691 (1.00) |
0.464 (1.00) |
0.117 (1.00) |
0.172 (1.00) |
0.285 (1.00) |
0.855 (1.00) |
0.509 (1.00) |
0.381 (1.00) |
|
ATP2A1 | 11 (1%) | 965 |
1 (1.00) |
0.683 (1.00) |
0.837 (1.00) |
0.735 (1.00) |
0.714 (1.00) |
0.332 (1.00) |
1 (1.00) |
0.901 (1.00) |
0.548 (1.00) |
0.949 (1.00) |
||
LRRC37A3 | 10 (1%) | 966 |
0.0364 (1.00) |
0.553 (1.00) |
0.938 (1.00) |
0.885 (1.00) |
0.399 (1.00) |
0.771 (1.00) |
0.176 (1.00) |
0.452 (1.00) |
0.559 (1.00) |
0.606 (1.00) |
0.392 (1.00) |
0.0676 (1.00) |
EPDR1 | 5 (1%) | 971 |
0.314 (1.00) |
0.823 (1.00) |
0.686 (1.00) |
0.555 (1.00) |
0.133 (1.00) |
0.207 (1.00) |
0.626 (1.00) |
0.82 (1.00) |
0.718 (1.00) |
0.383 (1.00) |
0.0971 (1.00) |
|
EXOC4 | 8 (1%) | 968 |
0.0106 (1.00) |
0.658 (1.00) |
0.347 (1.00) |
0.0754 (1.00) |
0.0116 (1.00) |
0.0146 (1.00) |
0.492 (1.00) |
0.589 (1.00) |
0.395 (1.00) |
0.152 (1.00) |
||
C11ORF49 | 5 (1%) | 971 |
0.166 (1.00) |
0.382 (1.00) |
0.116 (1.00) |
0.027 (1.00) |
0.0507 (1.00) |
0.0928 (1.00) |
0.0065 (1.00) |
0.218 (1.00) |
||||
ACTG1 | 8 (1%) | 968 |
0.286 (1.00) |
0.39 (1.00) |
0.958 (1.00) |
0.0416 (1.00) |
0.588 (1.00) |
0.5 (1.00) |
0.819 (1.00) |
0.0818 (1.00) |
1 (1.00) |
0.114 (1.00) |
||
ANXA11 | 3 (0%) | 973 |
0.671 (1.00) |
0.499 (1.00) |
0.463 (1.00) |
0.0617 (1.00) |
0.898 (1.00) |
0.303 (1.00) |
0.953 (1.00) |
0.632 (1.00) |
0.757 (1.00) |
|||
PFKP | 7 (1%) | 969 |
0.407 (1.00) |
0.013 (1.00) |
0.229 (1.00) |
0.698 (1.00) |
0.282 (1.00) |
0.227 (1.00) |
0.473 (1.00) |
0.365 (1.00) |
0.376 (1.00) |
0.0979 (1.00) |
0.289 (1.00) |
0.506 (1.00) |
GYLTL1B | 4 (0%) | 972 |
0.419 (1.00) |
0.72 (1.00) |
1 (1.00) |
0.688 (1.00) |
0.532 (1.00) |
0.687 (1.00) |
0.47 (1.00) |
0.82 (1.00) |
0.473 (1.00) |
|||
ANGPTL6 | 3 (0%) | 973 |
0.865 (1.00) |
0.545 (1.00) |
0.907 (1.00) |
|||||||||
SP3 | 7 (1%) | 969 |
0.88 (1.00) |
0.552 (1.00) |
0.553 (1.00) |
0.91 (1.00) |
0.198 (1.00) |
0.459 (1.00) |
0.246 (1.00) |
0.594 (1.00) |
0.26 (1.00) |
0.831 (1.00) |
||
RUFY1 | 6 (1%) | 970 |
0.386 (1.00) |
0.731 (1.00) |
0.343 (1.00) |
0.162 (1.00) |
0.847 (1.00) |
0.00535 (1.00) |
0.667 (1.00) |
0.345 (1.00) |
0.319 (1.00) |
0.64 (1.00) |
||
LIFR | 9 (1%) | 967 |
0.325 (1.00) |
0.481 (1.00) |
0.211 (1.00) |
0.279 (1.00) |
0.00796 (1.00) |
0.072 (1.00) |
0.476 (1.00) |
0.08 (1.00) |
0.439 (1.00) |
1 (1.00) |
1 (1.00) |
0.815 (1.00) |
OR6C76 | 7 (1%) | 969 |
0.291 (1.00) |
0.342 (1.00) |
0.422 (1.00) |
0.735 (1.00) |
0.519 (1.00) |
0.711 (1.00) |
0.503 (1.00) |
0.873 (1.00) |
0.499 (1.00) |
0.239 (1.00) |
0.532 (1.00) |
0.489 (1.00) |
HCFC2 | 10 (1%) | 966 |
0.0304 (1.00) |
0.551 (1.00) |
0.158 (1.00) |
0.843 (1.00) |
0.0278 (1.00) |
0.7 (1.00) |
0.923 (1.00) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
||
ACOT2 | 5 (1%) | 971 |
0.185 (1.00) |
0.343 (1.00) |
0.414 (1.00) |
0.108 (1.00) |
0.736 (1.00) |
0.933 (1.00) |
0.338 (1.00) |
0.923 (1.00) |
||||
KIAA0430 | 15 (2%) | 961 |
0.672 (1.00) |
0.747 (1.00) |
0.143 (1.00) |
0.151 (1.00) |
0.327 (1.00) |
0.275 (1.00) |
0.581 (1.00) |
0.586 (1.00) |
1 (1.00) |
0.808 (1.00) |
0.741 (1.00) |
0.231 (1.00) |
GTF2IRD2 | 8 (1%) | 968 |
0.573 (1.00) |
0.96 (1.00) |
0.0191 (1.00) |
0.519 (1.00) |
0.384 (1.00) |
0.957 (1.00) |
0.65 (1.00) |
0.707 (1.00) |
0.503 (1.00) |
0.559 (1.00) |
0.687 (1.00) |
0.021 (1.00) |
NPAS4 | 9 (1%) | 967 |
0.673 (1.00) |
0.146 (1.00) |
0.166 (1.00) |
0.537 (1.00) |
0.835 (1.00) |
0.883 (1.00) |
0.232 (1.00) |
0.0575 (1.00) |
0.147 (1.00) |
0.134 (1.00) |
0.389 (1.00) |
0.598 (1.00) |
JAK1 | 11 (1%) | 965 |
0.498 (1.00) |
0.476 (1.00) |
0.286 (1.00) |
0.462 (1.00) |
1 (1.00) |
0.731 (1.00) |
0.271 (1.00) |
0.318 (1.00) |
0.0517 (1.00) |
0.5 (1.00) |
0.231 (1.00) |
0.579 (1.00) |
FGFR3 | 4 (0%) | 972 |
0.0743 (1.00) |
0.922 (1.00) |
0.897 (1.00) |
0.435 (1.00) |
0.638 (1.00) |
0.217 (1.00) |
0.246 (1.00) |
|||||
FBXW7 | 15 (2%) | 961 |
0.812 (1.00) |
0.535 (1.00) |
0.168 (1.00) |
0.00416 (1.00) |
0.779 (1.00) |
0.548 (1.00) |
0.129 (1.00) |
0.0699 (1.00) |
0.304 (1.00) |
0.09 (1.00) |
0.342 (1.00) |
0.121 (1.00) |
OR2T8 | 6 (1%) | 970 |
0.782 (1.00) |
0.691 (1.00) |
0.766 (1.00) |
0.619 (1.00) |
0.03 (1.00) |
0.157 (1.00) |
0.164 (1.00) |
0.631 (1.00) |
||||
SHANK2 | 15 (2%) | 961 |
0.105 (1.00) |
0.196 (1.00) |
0.833 (1.00) |
0.129 (1.00) |
0.0686 (1.00) |
0.124 (1.00) |
0.234 (1.00) |
0.227 (1.00) |
0.54 (1.00) |
0.634 (1.00) |
0.4 (1.00) |
0.711 (1.00) |
TRMT2A | 7 (1%) | 969 |
0.954 (1.00) |
0.922 (1.00) |
0.722 (1.00) |
0.54 (1.00) |
0.393 (1.00) |
0.616 (1.00) |
0.779 (1.00) |
0.444 (1.00) |
0.889 (1.00) |
0.782 (1.00) |
0.392 (1.00) |
0.642 (1.00) |
SHISA4 | 5 (1%) | 971 |
0.0874 (1.00) |
0.732 (1.00) |
0.0503 (1.00) |
0.115 (1.00) |
0.129 (1.00) |
0.358 (1.00) |
0.461 (1.00) |
0.857 (1.00) |
||||
CCNL2 | 7 (1%) | 969 |
0.863 (1.00) |
0.856 (1.00) |
1 (1.00) |
0.348 (1.00) |
0.15 (1.00) |
0.725 (1.00) |
0.426 (1.00) |
0.63 (1.00) |
1 (1.00) |
0.901 (1.00) |
||
SEC14L5 | 7 (1%) | 969 |
0.214 (1.00) |
0.00238 (1.00) |
0.125 (1.00) |
0.648 (1.00) |
0.392 (1.00) |
0.103 (1.00) |
0.405 (1.00) |
0.0361 (1.00) |
0.0582 (1.00) |
0.0427 (1.00) |
0.0235 (1.00) |
0.59 (1.00) |
SARM1 | 6 (1%) | 970 |
0.559 (1.00) |
0.116 (1.00) |
0.681 (1.00) |
0.644 (1.00) |
0.0365 (1.00) |
0.286 (1.00) |
0.0322 (1.00) |
0.0848 (1.00) |
0.328 (1.00) |
0.105 (1.00) |
0.217 (1.00) |
|
CLEC18B | 6 (1%) | 970 |
0.567 (1.00) |
1 (1.00) |
0.65 (1.00) |
0.679 (1.00) |
0.4 (1.00) |
0.546 (1.00) |
0.659 (1.00) |
0.887 (1.00) |
0.776 (1.00) |
0.783 (1.00) |
0.51 (1.00) |
0.617 (1.00) |
GIPC3 | 4 (0%) | 972 |
0.832 (1.00) |
0.497 (1.00) |
0.461 (1.00) |
1 (1.00) |
0.17 (1.00) |
0.636 (1.00) |
0.709 (1.00) |
0.579 (1.00) |
0.846 (1.00) |
|||
HPS3 | 9 (1%) | 967 |
0.12 (1.00) |
0.511 (1.00) |
0.199 (1.00) |
0.207 (1.00) |
0.112 (1.00) |
0.0497 (1.00) |
0.135 (1.00) |
0.005 (1.00) |
0.0467 (1.00) |
0.0425 (1.00) |
0.143 (1.00) |
0.0598 (1.00) |
OR2T35 | 4 (0%) | 972 |
1 (1.00) |
0.0943 (1.00) |
0.828 (1.00) |
0.904 (1.00) |
0.872 (1.00) |
0.58 (1.00) |
0.54 (1.00) |
|||||
PPIL2 | 6 (1%) | 970 |
0.498 (1.00) |
0.678 (1.00) |
0.427 (1.00) |
0.674 (1.00) |
1 (1.00) |
0.922 (1.00) |
0.0596 (1.00) |
0.711 (1.00) |
||||
ZNF397 | 7 (1%) | 969 |
0.072 (1.00) |
0.849 (1.00) |
0.461 (1.00) |
0.594 (1.00) |
0.809 (1.00) |
0.393 (1.00) |
0.573 (1.00) |
0.321 (1.00) |
0.56 (1.00) |
0.523 (1.00) |
||
MLL | 17 (2%) | 959 |
0.653 (1.00) |
0.647 (1.00) |
0.287 (1.00) |
0.233 (1.00) |
0.777 (1.00) |
0.248 (1.00) |
0.531 (1.00) |
0.241 (1.00) |
0.66 (1.00) |
0.243 (1.00) |
0.301 (1.00) |
0.301 (1.00) |
ACVR1B | 7 (1%) | 969 |
0.89 (1.00) |
1 (1.00) |
0.904 (1.00) |
0.87 (1.00) |
0.559 (1.00) |
0.097 (1.00) |
0.729 (1.00) |
0.369 (1.00) |
0.271 (1.00) |
0.589 (1.00) |
0.291 (1.00) |
0.589 (1.00) |
GPR158 | 3 (0%) | 973 |
1 (1.00) |
0.444 (1.00) |
0.216 (1.00) |
0.114 (1.00) |
0.0762 (1.00) |
|||||||
ARHGEF15 | 9 (1%) | 967 |
0.462 (1.00) |
0.2 (1.00) |
0.73 (1.00) |
0.541 (1.00) |
0.893 (1.00) |
0.744 (1.00) |
0.658 (1.00) |
0.284 (1.00) |
0.245 (1.00) |
0.776 (1.00) |
0.288 (1.00) |
0.798 (1.00) |
TXNDC2 | 4 (0%) | 972 |
0.504 (1.00) |
0.616 (1.00) |
0.522 (1.00) |
0.247 (1.00) |
0.218 (1.00) |
0.508 (1.00) |
0.105 (1.00) |
0.556 (1.00) |
||||
COL9A2 | 3 (0%) | 973 |
0.359 (1.00) |
0.215 (1.00) |
0.418 (1.00) |
0.203 (1.00) |
||||||||
PARP4 | 12 (1%) | 964 |
0.735 (1.00) |
0.82 (1.00) |
0.454 (1.00) |
0.149 (1.00) |
0.19 (1.00) |
0.0595 (1.00) |
0.0487 (1.00) |
0.47 (1.00) |
0.181 (1.00) |
0.494 (1.00) |
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S1. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PIK3CA MUTATED | 7 | 13 | 23 | 8 | 61 | 23 | 8 | 21 |
PIK3CA WILD-TYPE | 14 | 25 | 91 | 89 | 47 | 50 | 11 | 18 |
Figure S1. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D1V1.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S2. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PIK3CA MUTATED | 19 | 70 | 39 | 5 | 31 |
PIK3CA WILD-TYPE | 77 | 82 | 77 | 84 | 25 |
Figure S2. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D1V2.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S3. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PIK3CA MUTATED | 147 | 52 | 53 | 51 | 11 |
PIK3CA WILD-TYPE | 220 | 174 | 38 | 190 | 26 |
Figure S3. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D1V3.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S4. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PIK3CA MUTATED | 7 | 81 | 53 | 31 | 36 |
PIK3CA WILD-TYPE | 109 | 100 | 104 | 52 | 75 |
Figure S4. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D1V4.png)
P value = 0.00013 (Fisher's exact test), Q value = 0.21
Table S5. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PIK3CA MUTATED | 27 | 49 | 46 |
PIK3CA WILD-TYPE | 119 | 80 | 72 |
Figure S5. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D1V5.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S6. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PIK3CA MUTATED | 30 | 51 | 12 | 23 | 6 |
PIK3CA WILD-TYPE | 29 | 58 | 78 | 81 | 25 |
Figure S6. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D1V6.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S7. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PIK3CA MUTATED | 8 | 62 | 120 | 59 | 39 | 19 | 9 |
PIK3CA WILD-TYPE | 171 | 73 | 95 | 97 | 186 | 29 | 6 |
Figure S7. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D1V7.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S8. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PIK3CA MUTATED | 7 | 102 | 92 | 69 | 31 | 15 |
PIK3CA WILD-TYPE | 161 | 120 | 96 | 103 | 140 | 37 |
Figure S8. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D1V8.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S9. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PIK3CA MUTATED | 119 | 153 | 42 |
PIK3CA WILD-TYPE | 151 | 260 | 232 |
Figure S9. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D1V9.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S10. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PIK3CA MUTATED | 70 | 57 | 153 | 7 | 27 |
PIK3CA WILD-TYPE | 82 | 117 | 237 | 118 | 89 |
Figure S10. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D1V10.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S11. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PIK3CA MUTATED | 94 | 88 | 29 |
PIK3CA WILD-TYPE | 154 | 129 | 158 |
Figure S11. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D1V11.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S12. Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PIK3CA MUTATED | 5 | 28 | 76 | 31 | 55 | 16 |
PIK3CA WILD-TYPE | 110 | 35 | 113 | 86 | 53 | 44 |
Figure S12. Get High-res Image Gene #1: 'PIK3CA MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D1V12.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S13. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TP53 MUTATED | 7 | 6 | 18 | 73 | 6 | 41 | 7 | 6 |
TP53 WILD-TYPE | 14 | 32 | 96 | 24 | 102 | 32 | 12 | 33 |
Figure S13. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D2V1.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S14. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TP53 MUTATED | 12 | 17 | 65 | 68 | 2 |
TP53 WILD-TYPE | 84 | 135 | 51 | 21 | 54 |
Figure S14. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D2V2.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S15. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TP53 MUTATED | 47 | 52 | 10 | 174 | 9 |
TP53 WILD-TYPE | 320 | 174 | 81 | 67 | 28 |
Figure S15. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D2V3.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S16. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TP53 MUTATED | 85 | 13 | 48 | 11 | 33 |
TP53 WILD-TYPE | 31 | 168 | 109 | 72 | 78 |
Figure S16. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D2V4.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S17. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TP53 MUTATED | 94 | 10 | 33 |
TP53 WILD-TYPE | 52 | 119 | 85 |
Figure S17. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D2V5.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S18. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TP53 MUTATED | 4 | 18 | 67 | 30 | 18 |
TP53 WILD-TYPE | 55 | 91 | 23 | 74 | 13 |
Figure S18. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D2V6.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S19. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TP53 MUTATED | 131 | 12 | 17 | 90 | 31 | 7 | 6 |
TP53 WILD-TYPE | 48 | 123 | 198 | 66 | 194 | 41 | 9 |
Figure S19. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D2V7.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S20. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TP53 MUTATED | 125 | 24 | 13 | 73 | 19 | 40 |
TP53 WILD-TYPE | 43 | 198 | 175 | 99 | 152 | 12 |
Figure S20. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D2V8.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S21. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TP53 MUTATED | 30 | 81 | 177 |
TP53 WILD-TYPE | 240 | 332 | 97 |
Figure S21. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D2V9.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S22. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TP53 MUTATED | 12 | 14 | 92 | 94 | 76 |
TP53 WILD-TYPE | 140 | 160 | 298 | 31 | 40 |
Figure S22. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D2V10.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S23. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TP53 MUTATED | 42 | 24 | 130 |
TP53 WILD-TYPE | 206 | 193 | 57 |
Figure S23. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D2V11.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S24. Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TP53 MUTATED | 83 | 5 | 42 | 14 | 8 | 44 |
TP53 WILD-TYPE | 32 | 58 | 147 | 103 | 100 | 16 |
Figure S24. Get High-res Image Gene #2: 'TP53 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D2V12.png)
P value = 0.00035 (Fisher's exact test), Q value = 0.55
Table S25. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CDH1 MUTATED | 0 | 6 | 2 | 1 | 10 | 6 | 1 | 7 |
CDH1 WILD-TYPE | 21 | 32 | 112 | 96 | 98 | 67 | 18 | 32 |
Figure S25. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D3V1.png)
P value = 0.00607 (Fisher's exact test), Q value = 1
Table S26. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CDH1 MUTATED | 4 | 19 | 7 | 1 | 2 |
CDH1 WILD-TYPE | 92 | 133 | 109 | 88 | 54 |
Figure S26. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D3V2.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S27. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CDH1 MUTATED | 62 | 12 | 24 | 2 | 4 |
CDH1 WILD-TYPE | 305 | 214 | 67 | 239 | 33 |
Figure S27. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D3V3.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S28. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CDH1 MUTATED | 0 | 25 | 19 | 18 | 20 |
CDH1 WILD-TYPE | 116 | 156 | 138 | 65 | 91 |
Figure S28. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D3V4.png)
P value = 0.00852 (Fisher's exact test), Q value = 1
Table S29. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CDH1 MUTATED | 5 | 4 | 14 |
CDH1 WILD-TYPE | 141 | 125 | 104 |
Figure S29. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D3V5.png)
P value = 0.0194 (Fisher's exact test), Q value = 1
Table S30. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CDH1 MUTATED | 1 | 12 | 1 | 7 | 2 |
CDH1 WILD-TYPE | 58 | 97 | 89 | 97 | 29 |
Figure S30. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D3V6.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S31. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CDH1 MUTATED | 1 | 32 | 34 | 11 | 12 | 15 | 1 |
CDH1 WILD-TYPE | 178 | 103 | 181 | 145 | 213 | 33 | 14 |
Figure S31. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D3V7.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S32. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CDH1 MUTATED | 1 | 59 | 20 | 15 | 8 | 3 |
CDH1 WILD-TYPE | 167 | 163 | 168 | 157 | 163 | 49 |
Figure S32. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D3V8.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S33. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CDH1 MUTATED | 76 | 24 | 4 |
CDH1 WILD-TYPE | 194 | 389 | 270 |
Figure S33. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D3V9.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S34. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CDH1 MUTATED | 54 | 17 | 31 | 0 | 2 |
CDH1 WILD-TYPE | 98 | 157 | 359 | 125 | 114 |
Figure S34. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D3V10.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S35. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CDH1 MUTATED | 13 | 64 | 3 |
CDH1 WILD-TYPE | 235 | 153 | 184 |
Figure S35. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D3V11.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S36. Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CDH1 MUTATED | 0 | 9 | 12 | 5 | 52 | 2 |
CDH1 WILD-TYPE | 115 | 54 | 177 | 112 | 56 | 58 |
Figure S36. Get High-res Image Gene #3: 'CDH1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D3V12.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S37. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GATA3 MUTATED | 1 | 6 | 27 | 2 | 18 | 4 | 2 | 0 |
GATA3 WILD-TYPE | 20 | 32 | 87 | 95 | 90 | 69 | 17 | 39 |
Figure S37. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D4V1.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S38. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GATA3 MUTATED | 28 | 22 | 5 | 1 | 4 |
GATA3 WILD-TYPE | 68 | 130 | 111 | 88 | 52 |
Figure S38. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D4V2.png)
P value = 0.00114 (Fisher's exact test), Q value = 1
Table S39. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GATA3 MUTATED | 43 | 30 | 12 | 10 | 1 |
GATA3 WILD-TYPE | 324 | 196 | 79 | 231 | 36 |
Figure S39. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D4V3.png)
P value = 3e-05 (Fisher's exact test), Q value = 0.048
Table S40. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
GATA3 MUTATED | 0 | 22 | 19 | 11 | 5 |
GATA3 WILD-TYPE | 116 | 159 | 138 | 72 | 106 |
Figure S40. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D4V4.png)
P value = 0.0158 (Fisher's exact test), Q value = 1
Table S41. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GATA3 MUTATED | 12 | 24 | 10 |
GATA3 WILD-TYPE | 134 | 105 | 108 |
Figure S41. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D4V5.png)
P value = 0.00012 (Fisher's exact test), Q value = 0.19
Table S42. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GATA3 MUTATED | 12 | 8 | 2 | 21 | 3 |
GATA3 WILD-TYPE | 47 | 101 | 88 | 83 | 28 |
Figure S42. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D4V6.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S43. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GATA3 MUTATED | 1 | 14 | 33 | 6 | 41 | 1 | 0 |
GATA3 WILD-TYPE | 178 | 121 | 182 | 150 | 184 | 47 | 15 |
Figure S43. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D4V7.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S44. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GATA3 MUTATED | 0 | 12 | 36 | 15 | 33 | 0 |
GATA3 WILD-TYPE | 168 | 210 | 152 | 157 | 138 | 52 |
Figure S44. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D4V8.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S45. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GATA3 MUTATED | 21 | 65 | 9 |
GATA3 WILD-TYPE | 249 | 348 | 265 |
Figure S45. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D4V9.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S46. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GATA3 MUTATED | 11 | 24 | 56 | 0 | 4 |
GATA3 WILD-TYPE | 141 | 150 | 334 | 125 | 112 |
Figure S46. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D4V10.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S47. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
GATA3 MUTATED | 47 | 16 | 4 |
GATA3 WILD-TYPE | 201 | 201 | 183 |
Figure S47. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D4V11.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S48. Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
GATA3 MUTATED | 0 | 7 | 37 | 17 | 6 | 0 |
GATA3 WILD-TYPE | 115 | 56 | 152 | 100 | 102 | 60 |
Figure S48. Get High-res Image Gene #4: 'GATA3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D4V12.png)
P value = 3e-05 (Fisher's exact test), Q value = 0.048
Table S49. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MAP3K1 MUTATED | 5 | 1 | 12 | 1 | 16 | 1 | 0 | 3 |
MAP3K1 WILD-TYPE | 16 | 37 | 102 | 96 | 92 | 72 | 19 | 36 |
Figure S49. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D5V1.png)
P value = 0.00015 (Fisher's exact test), Q value = 0.24
Table S50. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MAP3K1 MUTATED | 9 | 13 | 4 | 1 | 12 |
MAP3K1 WILD-TYPE | 87 | 139 | 112 | 88 | 44 |
Figure S50. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D5V2.png)
P value = 0.00101 (Fisher's exact test), Q value = 1
Table S51. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MAP3K1 MUTATED | 41 | 14 | 7 | 6 | 2 |
MAP3K1 WILD-TYPE | 326 | 212 | 84 | 235 | 35 |
Figure S51. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D5V3.png)
P value = 0.0507 (Fisher's exact test), Q value = 1
Table S52. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MAP3K1 MUTATED | 3 | 18 | 5 | 5 | 7 |
MAP3K1 WILD-TYPE | 113 | 163 | 152 | 78 | 104 |
P value = 0.00056 (Fisher's exact test), Q value = 0.88
Table S53. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MAP3K1 MUTATED | 4 | 20 | 12 |
MAP3K1 WILD-TYPE | 142 | 109 | 106 |
Figure S52. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D5V5.png)
P value = 1e-05 (Fisher's exact test), Q value = 0.016
Table S54. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MAP3K1 MUTATED | 16 | 14 | 1 | 5 | 0 |
MAP3K1 WILD-TYPE | 43 | 95 | 89 | 99 | 31 |
Figure S53. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D5V6.png)
P value = 0.00021 (Fisher's exact test), Q value = 0.33
Table S55. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MAP3K1 MUTATED | 3 | 14 | 24 | 4 | 21 | 4 | 0 |
MAP3K1 WILD-TYPE | 176 | 121 | 191 | 152 | 204 | 44 | 15 |
Figure S54. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D5V7.png)
P value = 6e-05 (Fisher's exact test), Q value = 0.095
Table S56. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MAP3K1 MUTATED | 3 | 19 | 23 | 8 | 17 | 0 |
MAP3K1 WILD-TYPE | 165 | 203 | 165 | 164 | 154 | 52 |
Figure S55. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D5V8.png)
P value = 0.00013 (Fisher's exact test), Q value = 0.21
Table S57. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MAP3K1 MUTATED | 27 | 37 | 6 |
MAP3K1 WILD-TYPE | 243 | 376 | 268 |
Figure S56. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D5V9.png)
P value = 0.00021 (Fisher's exact test), Q value = 0.33
Table S58. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MAP3K1 MUTATED | 19 | 21 | 24 | 2 | 4 |
MAP3K1 WILD-TYPE | 133 | 153 | 366 | 123 | 112 |
Figure S57. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D5V10.png)
P value = 0.00043 (Fisher's exact test), Q value = 0.68
Table S59. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MAP3K1 MUTATED | 26 | 18 | 3 |
MAP3K1 WILD-TYPE | 222 | 199 | 184 |
Figure S58. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D5V11.png)
P value = 0.0208 (Fisher's exact test), Q value = 1
Table S60. Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MAP3K1 MUTATED | 3 | 8 | 12 | 12 | 11 | 1 |
MAP3K1 WILD-TYPE | 112 | 55 | 177 | 105 | 97 | 59 |
Figure S59. Get High-res Image Gene #5: 'MAP3K1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D5V12.png)
P value = 0.0159 (Fisher's exact test), Q value = 1
Table S61. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RUNX1 MUTATED | 3 | 1 | 3 | 0 | 5 | 2 | 0 | 4 |
RUNX1 WILD-TYPE | 18 | 37 | 111 | 97 | 103 | 71 | 19 | 35 |
Figure S60. Get High-res Image Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D6V1.png)
P value = 0.0869 (Fisher's exact test), Q value = 1
Table S62. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RUNX1 MUTATED | 3 | 10 | 3 | 0 | 2 |
RUNX1 WILD-TYPE | 93 | 142 | 113 | 89 | 54 |
P value = 0.00508 (Fisher's exact test), Q value = 1
Table S63. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RUNX1 MUTATED | 17 | 3 | 6 | 2 | 0 |
RUNX1 WILD-TYPE | 350 | 223 | 85 | 239 | 37 |
Figure S61. Get High-res Image Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D6V3.png)
P value = 0.168 (Fisher's exact test), Q value = 1
Table S64. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RUNX1 MUTATED | 2 | 3 | 4 | 6 | 4 |
RUNX1 WILD-TYPE | 114 | 178 | 153 | 77 | 107 |
P value = 1 (Fisher's exact test), Q value = 1
Table S65. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RUNX1 MUTATED | 4 | 3 | 3 |
RUNX1 WILD-TYPE | 142 | 126 | 115 |
P value = 0.299 (Fisher's exact test), Q value = 1
Table S66. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RUNX1 MUTATED | 1 | 4 | 0 | 4 | 1 |
RUNX1 WILD-TYPE | 58 | 105 | 90 | 100 | 30 |
P value = 0.0478 (Fisher's exact test), Q value = 1
Table S67. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RUNX1 MUTATED | 1 | 7 | 10 | 6 | 3 | 2 | 0 |
RUNX1 WILD-TYPE | 178 | 128 | 205 | 150 | 222 | 46 | 15 |
Figure S62. Get High-res Image Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D6V7.png)
P value = 0.0299 (Fisher's exact test), Q value = 1
Table S68. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RUNX1 MUTATED | 1 | 9 | 8 | 9 | 2 | 0 |
RUNX1 WILD-TYPE | 167 | 213 | 180 | 163 | 169 | 52 |
Figure S63. Get High-res Image Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D6V8.png)
P value = 0.0134 (Fisher's exact test), Q value = 1
Table S69. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RUNX1 MUTATED | 12 | 15 | 2 |
RUNX1 WILD-TYPE | 258 | 398 | 272 |
Figure S64. Get High-res Image Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D6V9.png)
P value = 0.264 (Fisher's exact test), Q value = 1
Table S70. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RUNX1 MUTATED | 8 | 5 | 13 | 1 | 2 |
RUNX1 WILD-TYPE | 144 | 169 | 377 | 124 | 114 |
P value = 0.223 (Fisher's exact test), Q value = 1
Table S71. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RUNX1 MUTATED | 7 | 10 | 3 |
RUNX1 WILD-TYPE | 241 | 207 | 184 |
P value = 0.316 (Fisher's exact test), Q value = 1
Table S72. Gene #6: 'RUNX1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RUNX1 MUTATED | 1 | 3 | 6 | 2 | 6 | 2 |
RUNX1 WILD-TYPE | 114 | 60 | 183 | 115 | 102 | 58 |
P value = 0.311 (Fisher's exact test), Q value = 1
Table S73. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PTEN MUTATED | 2 | 2 | 3 | 1 | 4 | 1 | 0 | 0 |
PTEN WILD-TYPE | 19 | 36 | 111 | 96 | 104 | 72 | 19 | 39 |
P value = 0.904 (Fisher's exact test), Q value = 1
Table S74. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PTEN MUTATED | 3 | 5 | 3 | 1 | 1 |
PTEN WILD-TYPE | 93 | 147 | 113 | 88 | 55 |
P value = 0.548 (Fisher's exact test), Q value = 1
Table S75. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PTEN MUTATED | 14 | 6 | 6 | 8 | 1 |
PTEN WILD-TYPE | 353 | 220 | 85 | 233 | 36 |
P value = 0.654 (Fisher's exact test), Q value = 1
Table S76. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PTEN MUTATED | 6 | 5 | 9 | 3 | 6 |
PTEN WILD-TYPE | 110 | 176 | 148 | 80 | 105 |
P value = 0.921 (Fisher's exact test), Q value = 1
Table S77. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PTEN MUTATED | 3 | 4 | 3 |
PTEN WILD-TYPE | 143 | 125 | 115 |
P value = 0.975 (Fisher's exact test), Q value = 1
Table S78. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PTEN MUTATED | 2 | 3 | 2 | 3 | 0 |
PTEN WILD-TYPE | 57 | 106 | 88 | 101 | 31 |
P value = 0.421 (Fisher's exact test), Q value = 1
Table S79. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PTEN MUTATED | 4 | 8 | 6 | 8 | 7 | 1 | 1 |
PTEN WILD-TYPE | 175 | 127 | 209 | 148 | 218 | 47 | 14 |
P value = 0.372 (Fisher's exact test), Q value = 1
Table S80. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PTEN MUTATED | 5 | 7 | 7 | 10 | 3 | 3 |
PTEN WILD-TYPE | 163 | 215 | 181 | 162 | 168 | 49 |
P value = 0.763 (Fisher's exact test), Q value = 1
Table S81. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PTEN MUTATED | 11 | 16 | 8 |
PTEN WILD-TYPE | 259 | 397 | 266 |
P value = 0.495 (Fisher's exact test), Q value = 1
Table S82. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PTEN MUTATED | 8 | 3 | 15 | 4 | 5 |
PTEN WILD-TYPE | 144 | 171 | 375 | 121 | 111 |
P value = 0.2 (Fisher's exact test), Q value = 1
Table S83. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PTEN MUTATED | 7 | 13 | 6 |
PTEN WILD-TYPE | 241 | 204 | 181 |
P value = 0.949 (Fisher's exact test), Q value = 1
Table S84. Gene #7: 'PTEN MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PTEN MUTATED | 5 | 3 | 6 | 4 | 5 | 3 |
PTEN WILD-TYPE | 110 | 60 | 183 | 113 | 103 | 57 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S85. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ARID1A MUTATED | 3 | 1 | 4 | 2 | 3 | 1 | 0 | 1 |
ARID1A WILD-TYPE | 18 | 37 | 110 | 95 | 105 | 72 | 19 | 38 |
P value = 0.94 (Fisher's exact test), Q value = 1
Table S86. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ARID1A MUTATED | 4 | 5 | 3 | 2 | 1 |
ARID1A WILD-TYPE | 92 | 147 | 113 | 87 | 55 |
P value = 0.0839 (Fisher's exact test), Q value = 1
Table S87. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ARID1A MUTATED | 9 | 11 | 1 | 3 | 2 |
ARID1A WILD-TYPE | 358 | 215 | 90 | 238 | 35 |
P value = 0.26 (Fisher's exact test), Q value = 1
Table S88. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ARID1A MUTATED | 1 | 6 | 6 | 4 | 1 |
ARID1A WILD-TYPE | 115 | 175 | 151 | 79 | 110 |
P value = 1 (Fisher's exact test), Q value = 1
Table S89. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ARID1A MUTATED | 4 | 3 | 3 |
ARID1A WILD-TYPE | 142 | 126 | 115 |
P value = 0.243 (Fisher's exact test), Q value = 1
Table S90. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ARID1A MUTATED | 2 | 1 | 1 | 4 | 2 |
ARID1A WILD-TYPE | 57 | 108 | 89 | 100 | 29 |
P value = 0.114 (Fisher's exact test), Q value = 1
Table S91. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ARID1A MUTATED | 2 | 3 | 3 | 5 | 13 | 1 | 0 |
ARID1A WILD-TYPE | 177 | 132 | 212 | 151 | 212 | 47 | 15 |
P value = 0.773 (Fisher's exact test), Q value = 1
Table S92. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ARID1A MUTATED | 2 | 7 | 5 | 6 | 6 | 1 |
ARID1A WILD-TYPE | 166 | 215 | 183 | 166 | 165 | 51 |
P value = 0.227 (Fisher's exact test), Q value = 1
Table S93. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ARID1A MUTATED | 8 | 15 | 4 |
ARID1A WILD-TYPE | 262 | 398 | 270 |
P value = 0.0708 (Fisher's exact test), Q value = 1
Table S94. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ARID1A MUTATED | 1 | 10 | 10 | 2 | 4 |
ARID1A WILD-TYPE | 151 | 164 | 380 | 123 | 112 |
P value = 0.151 (Fisher's exact test), Q value = 1
Table S95. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ARID1A MUTATED | 6 | 7 | 1 |
ARID1A WILD-TYPE | 242 | 210 | 186 |
P value = 0.381 (Fisher's exact test), Q value = 1
Table S96. Gene #8: 'ARID1A MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ARID1A MUTATED | 0 | 1 | 4 | 4 | 3 | 2 |
ARID1A WILD-TYPE | 115 | 62 | 185 | 113 | 105 | 58 |
P value = 0.0934 (Fisher's exact test), Q value = 1
Table S97. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CBFB MUTATED | 1 | 1 | 0 | 1 | 6 | 2 | 0 | 0 |
CBFB WILD-TYPE | 20 | 37 | 114 | 96 | 102 | 71 | 19 | 39 |
P value = 0.216 (Fisher's exact test), Q value = 1
Table S98. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CBFB MUTATED | 0 | 6 | 2 | 1 | 2 |
CBFB WILD-TYPE | 96 | 146 | 114 | 88 | 54 |
P value = 0.02 (Fisher's exact test), Q value = 1
Table S99. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CBFB MUTATED | 13 | 4 | 5 | 1 | 0 |
CBFB WILD-TYPE | 354 | 222 | 86 | 240 | 37 |
Figure S65. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D9V3.png)
P value = 0.133 (Fisher's exact test), Q value = 1
Table S100. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CBFB MUTATED | 0 | 7 | 4 | 3 | 1 |
CBFB WILD-TYPE | 116 | 174 | 153 | 80 | 110 |
P value = 0.111 (Fisher's exact test), Q value = 1
Table S101. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CBFB MUTATED | 1 | 6 | 3 |
CBFB WILD-TYPE | 145 | 123 | 115 |
P value = 0.0811 (Fisher's exact test), Q value = 1
Table S102. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CBFB MUTATED | 5 | 2 | 2 | 1 | 0 |
CBFB WILD-TYPE | 54 | 107 | 88 | 103 | 31 |
P value = 3e-05 (Fisher's exact test), Q value = 0.048
Table S103. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CBFB MUTATED | 1 | 3 | 17 | 2 | 0 | 0 | 0 |
CBFB WILD-TYPE | 178 | 132 | 198 | 154 | 225 | 48 | 15 |
Figure S66. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D9V7.png)
P value = 0.00036 (Fisher's exact test), Q value = 0.57
Table S104. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CBFB MUTATED | 1 | 3 | 14 | 3 | 1 | 1 |
CBFB WILD-TYPE | 167 | 219 | 174 | 169 | 170 | 51 |
Figure S67. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D9V8.png)
P value = 0.0133 (Fisher's exact test), Q value = 1
Table S105. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CBFB MUTATED | 10 | 11 | 1 |
CBFB WILD-TYPE | 260 | 402 | 273 |
Figure S68. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D9V9.png)
P value = 0.00341 (Fisher's exact test), Q value = 1
Table S106. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CBFB MUTATED | 7 | 1 | 14 | 0 | 0 |
CBFB WILD-TYPE | 145 | 173 | 376 | 125 | 116 |
Figure S69. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D9V10.png)
P value = 0.0052 (Fisher's exact test), Q value = 1
Table S107. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CBFB MUTATED | 11 | 4 | 0 |
CBFB WILD-TYPE | 237 | 213 | 187 |
Figure S70. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D9V11.png)
P value = 0.00133 (Fisher's exact test), Q value = 1
Table S108. Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CBFB MUTATED | 0 | 6 | 7 | 1 | 1 | 0 |
CBFB WILD-TYPE | 115 | 57 | 182 | 116 | 107 | 60 |
Figure S71. Get High-res Image Gene #9: 'CBFB MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D9V12.png)
P value = 0.669 (Fisher's exact test), Q value = 1
Table S109. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MLL3 MUTATED | 1 | 1 | 8 | 5 | 12 | 4 | 1 | 4 |
MLL3 WILD-TYPE | 20 | 37 | 106 | 92 | 96 | 69 | 18 | 35 |
P value = 0.154 (Fisher's exact test), Q value = 1
Table S110. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MLL3 MUTATED | 6 | 10 | 6 | 5 | 9 |
MLL3 WILD-TYPE | 90 | 142 | 110 | 84 | 47 |
P value = 0.387 (Fisher's exact test), Q value = 1
Table S111. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MLL3 MUTATED | 29 | 16 | 9 | 11 | 2 |
MLL3 WILD-TYPE | 338 | 210 | 82 | 230 | 35 |
P value = 0.356 (Fisher's exact test), Q value = 1
Table S112. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MLL3 MUTATED | 5 | 18 | 14 | 7 | 6 |
MLL3 WILD-TYPE | 111 | 163 | 143 | 76 | 105 |
P value = 0.638 (Fisher's exact test), Q value = 1
Table S113. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MLL3 MUTATED | 10 | 6 | 9 |
MLL3 WILD-TYPE | 136 | 123 | 109 |
P value = 0.527 (Fisher's exact test), Q value = 1
Table S114. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MLL3 MUTATED | 6 | 6 | 7 | 4 | 2 |
MLL3 WILD-TYPE | 53 | 103 | 83 | 100 | 29 |
P value = 0.0436 (Fisher's exact test), Q value = 1
Table S115. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MLL3 MUTATED | 8 | 9 | 24 | 14 | 14 | 0 | 0 |
MLL3 WILD-TYPE | 171 | 126 | 191 | 142 | 211 | 48 | 15 |
Figure S72. Get High-res Image Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D10V7.png)
P value = 0.121 (Fisher's exact test), Q value = 1
Table S116. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MLL3 MUTATED | 8 | 11 | 20 | 17 | 10 | 3 |
MLL3 WILD-TYPE | 160 | 211 | 168 | 155 | 161 | 49 |
P value = 0.0624 (Fisher's exact test), Q value = 1
Table S117. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MLL3 MUTATED | 20 | 35 | 11 |
MLL3 WILD-TYPE | 250 | 378 | 263 |
P value = 0.364 (Fisher's exact test), Q value = 1
Table S118. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MLL3 MUTATED | 11 | 14 | 31 | 4 | 6 |
MLL3 WILD-TYPE | 141 | 160 | 359 | 121 | 110 |
P value = 0.177 (Fisher's exact test), Q value = 1
Table S119. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MLL3 MUTATED | 20 | 14 | 7 |
MLL3 WILD-TYPE | 228 | 203 | 180 |
P value = 0.219 (Fisher's exact test), Q value = 1
Table S120. Gene #10: 'MLL3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MLL3 MUTATED | 3 | 2 | 17 | 6 | 8 | 5 |
MLL3 WILD-TYPE | 112 | 61 | 172 | 111 | 100 | 55 |
P value = 0.366 (Fisher's exact test), Q value = 1
Table S121. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FOXA1 MUTATED | 0 | 0 | 3 | 0 | 1 | 2 | 0 | 2 |
FOXA1 WILD-TYPE | 21 | 38 | 111 | 97 | 107 | 71 | 19 | 37 |
P value = 0.532 (Fisher's exact test), Q value = 1
Table S122. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FOXA1 MUTATED | 3 | 2 | 2 | 0 | 1 |
FOXA1 WILD-TYPE | 93 | 150 | 114 | 89 | 55 |
P value = 0.0538 (Fisher's exact test), Q value = 1
Table S123. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FOXA1 MUTATED | 14 | 5 | 3 | 1 | 0 |
FOXA1 WILD-TYPE | 353 | 221 | 88 | 240 | 37 |
P value = 0.0446 (Fisher's exact test), Q value = 1
Table S124. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
FOXA1 MUTATED | 0 | 5 | 9 | 1 | 2 |
FOXA1 WILD-TYPE | 116 | 176 | 148 | 82 | 109 |
Figure S73. Get High-res Image Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D11V4.png)
P value = 0.894 (Fisher's exact test), Q value = 1
Table S125. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
FOXA1 MUTATED | 2 | 3 | 2 |
FOXA1 WILD-TYPE | 144 | 126 | 116 |
P value = 0.95 (Fisher's exact test), Q value = 1
Table S126. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
FOXA1 MUTATED | 1 | 2 | 1 | 3 | 0 |
FOXA1 WILD-TYPE | 58 | 107 | 89 | 101 | 31 |
P value = 0.0731 (Fisher's exact test), Q value = 1
Table S127. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FOXA1 MUTATED | 1 | 2 | 8 | 4 | 4 | 4 | 0 |
FOXA1 WILD-TYPE | 178 | 133 | 207 | 152 | 221 | 44 | 15 |
P value = 0.177 (Fisher's exact test), Q value = 1
Table S128. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FOXA1 MUTATED | 1 | 10 | 4 | 5 | 3 | 0 |
FOXA1 WILD-TYPE | 167 | 212 | 184 | 167 | 168 | 52 |
P value = 0.134 (Fisher's exact test), Q value = 1
Table S129. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FOXA1 MUTATED | 10 | 10 | 3 |
FOXA1 WILD-TYPE | 260 | 403 | 271 |
P value = 0.695 (Fisher's exact test), Q value = 1
Table S130. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FOXA1 MUTATED | 5 | 5 | 10 | 1 | 2 |
FOXA1 WILD-TYPE | 147 | 169 | 380 | 124 | 114 |
P value = 0.0757 (Fisher's exact test), Q value = 1
Table S131. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
FOXA1 MUTATED | 9 | 7 | 1 |
FOXA1 WILD-TYPE | 239 | 210 | 186 |
P value = 0.549 (Fisher's exact test), Q value = 1
Table S132. Gene #11: 'FOXA1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
FOXA1 MUTATED | 1 | 3 | 7 | 2 | 3 | 1 |
FOXA1 WILD-TYPE | 114 | 60 | 182 | 115 | 105 | 59 |
P value = 0.0576 (Fisher's exact test), Q value = 1
Table S133. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MAP2K4 MUTATED | 0 | 3 | 3 | 0 | 8 | 2 | 1 | 2 |
MAP2K4 WILD-TYPE | 21 | 35 | 111 | 97 | 100 | 71 | 18 | 37 |
P value = 0.00423 (Fisher's exact test), Q value = 1
Table S134. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MAP2K4 MUTATED | 2 | 9 | 2 | 0 | 6 |
MAP2K4 WILD-TYPE | 94 | 143 | 114 | 89 | 50 |
Figure S74. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D12V2.png)
P value = 0.0419 (Fisher's exact test), Q value = 1
Table S135. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MAP2K4 MUTATED | 13 | 7 | 7 | 3 | 2 |
MAP2K4 WILD-TYPE | 354 | 219 | 84 | 238 | 35 |
Figure S75. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D12V3.png)
P value = 0.047 (Fisher's exact test), Q value = 1
Table S136. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MAP2K4 MUTATED | 1 | 13 | 7 | 2 | 2 |
MAP2K4 WILD-TYPE | 115 | 168 | 150 | 81 | 109 |
Figure S76. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D12V4.png)
P value = 0.00234 (Fisher's exact test), Q value = 1
Table S137. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MAP2K4 MUTATED | 0 | 5 | 8 |
MAP2K4 WILD-TYPE | 146 | 124 | 110 |
Figure S77. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D12V5.png)
P value = 0.292 (Fisher's exact test), Q value = 1
Table S138. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MAP2K4 MUTATED | 2 | 7 | 1 | 3 | 0 |
MAP2K4 WILD-TYPE | 57 | 102 | 89 | 101 | 31 |
P value = 0.0058 (Fisher's exact test), Q value = 1
Table S139. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MAP2K4 MUTATED | 0 | 3 | 12 | 3 | 12 | 1 | 1 |
MAP2K4 WILD-TYPE | 179 | 132 | 203 | 153 | 213 | 47 | 14 |
Figure S78. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D12V7.png)
P value = 0.00791 (Fisher's exact test), Q value = 1
Table S140. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MAP2K4 MUTATED | 0 | 10 | 8 | 4 | 10 | 0 |
MAP2K4 WILD-TYPE | 168 | 212 | 180 | 168 | 161 | 52 |
Figure S79. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D12V8.png)
P value = 0.00046 (Fisher's exact test), Q value = 0.73
Table S141. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MAP2K4 MUTATED | 6 | 24 | 2 |
MAP2K4 WILD-TYPE | 264 | 389 | 272 |
Figure S80. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D12V9.png)
P value = 0.00054 (Fisher's exact test), Q value = 0.85
Table S142. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MAP2K4 MUTATED | 1 | 12 | 18 | 0 | 1 |
MAP2K4 WILD-TYPE | 151 | 162 | 372 | 125 | 115 |
Figure S81. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D12V10.png)
P value = 3e-05 (Fisher's exact test), Q value = 0.048
Table S143. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MAP2K4 MUTATED | 17 | 3 | 0 |
MAP2K4 WILD-TYPE | 231 | 214 | 187 |
Figure S82. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D12V11.png)
P value = 0.0016 (Fisher's exact test), Q value = 1
Table S144. Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MAP2K4 MUTATED | 0 | 1 | 14 | 4 | 1 | 0 |
MAP2K4 WILD-TYPE | 115 | 62 | 175 | 113 | 107 | 60 |
Figure S83. Get High-res Image Gene #12: 'MAP2K4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D12V12.png)
P value = 0.385 (Fisher's exact test), Q value = 1
Table S145. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RBMX MUTATED | 0 | 0 | 0 | 3 | 2 | 0 | 0 | 1 |
RBMX WILD-TYPE | 21 | 38 | 114 | 94 | 106 | 73 | 19 | 38 |
P value = 0.105 (Fisher's exact test), Q value = 1
Table S146. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RBMX MUTATED | 0 | 3 | 0 | 3 | 0 |
RBMX WILD-TYPE | 96 | 149 | 116 | 86 | 56 |
P value = 0.0973 (Fisher's exact test), Q value = 1
Table S147. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RBMX MUTATED | 6 | 0 | 1 | 6 | 1 |
RBMX WILD-TYPE | 361 | 226 | 90 | 235 | 36 |
P value = 0.141 (Fisher's exact test), Q value = 1
Table S148. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RBMX MUTATED | 3 | 0 | 4 | 2 | 2 |
RBMX WILD-TYPE | 113 | 181 | 153 | 81 | 109 |
P value = 0.556 (Fisher's exact test), Q value = 1
Table S149. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RBMX MUTATED | 2 | 2 | 0 |
RBMX WILD-TYPE | 144 | 127 | 118 |
P value = 0.585 (Fisher's exact test), Q value = 1
Table S150. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RBMX MUTATED | 1 | 1 | 2 | 0 | 0 |
RBMX WILD-TYPE | 58 | 108 | 88 | 104 | 31 |
P value = 0.0728 (Fisher's exact test), Q value = 1
Table S151. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RBMX MUTATED | 5 | 2 | 3 | 2 | 0 | 1 | 1 |
RBMX WILD-TYPE | 174 | 133 | 212 | 154 | 225 | 47 | 14 |
P value = 0.246 (Fisher's exact test), Q value = 1
Table S152. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RBMX MUTATED | 5 | 4 | 2 | 2 | 0 | 1 |
RBMX WILD-TYPE | 163 | 218 | 186 | 170 | 171 | 51 |
P value = 0.615 (Fisher's exact test), Q value = 1
Table S153. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RBMX MUTATED | 3 | 5 | 6 |
RBMX WILD-TYPE | 267 | 408 | 268 |
P value = 0.541 (Fisher's exact test), Q value = 1
Table S154. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RBMX MUTATED | 2 | 1 | 5 | 3 | 3 |
RBMX WILD-TYPE | 150 | 173 | 385 | 122 | 113 |
P value = 0.248 (Fisher's exact test), Q value = 1
Table S155. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RBMX MUTATED | 2 | 2 | 5 |
RBMX WILD-TYPE | 246 | 215 | 182 |
P value = 0.628 (Fisher's exact test), Q value = 1
Table S156. Gene #13: 'RBMX MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RBMX MUTATED | 3 | 1 | 1 | 1 | 2 | 1 |
RBMX WILD-TYPE | 112 | 62 | 188 | 116 | 106 | 59 |
P value = 0.576 (Fisher's exact test), Q value = 1
Table S157. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TBX3 MUTATED | 0 | 1 | 3 | 2 | 7 | 1 | 0 | 2 |
TBX3 WILD-TYPE | 21 | 37 | 111 | 95 | 101 | 72 | 19 | 37 |
P value = 0.627 (Fisher's exact test), Q value = 1
Table S158. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TBX3 MUTATED | 3 | 6 | 3 | 1 | 3 |
TBX3 WILD-TYPE | 93 | 146 | 113 | 88 | 53 |
P value = 0.341 (Fisher's exact test), Q value = 1
Table S159. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TBX3 MUTATED | 13 | 6 | 4 | 3 | 1 |
TBX3 WILD-TYPE | 354 | 220 | 87 | 238 | 36 |
P value = 0.375 (Fisher's exact test), Q value = 1
Table S160. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TBX3 MUTATED | 1 | 7 | 2 | 3 | 3 |
TBX3 WILD-TYPE | 115 | 174 | 155 | 80 | 108 |
P value = 0.0828 (Fisher's exact test), Q value = 1
Table S161. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TBX3 MUTATED | 1 | 3 | 6 |
TBX3 WILD-TYPE | 145 | 126 | 112 |
P value = 0.975 (Fisher's exact test), Q value = 1
Table S162. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TBX3 MUTATED | 2 | 3 | 2 | 3 | 0 |
TBX3 WILD-TYPE | 57 | 106 | 88 | 101 | 31 |
P value = 0.143 (Fisher's exact test), Q value = 1
Table S163. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TBX3 MUTATED | 2 | 8 | 9 | 2 | 5 | 1 | 0 |
TBX3 WILD-TYPE | 177 | 127 | 206 | 154 | 220 | 47 | 15 |
P value = 0.388 (Fisher's exact test), Q value = 1
Table S164. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TBX3 MUTATED | 2 | 10 | 7 | 4 | 3 | 1 |
TBX3 WILD-TYPE | 166 | 212 | 181 | 168 | 168 | 51 |
P value = 0.0983 (Fisher's exact test), Q value = 1
Table S165. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TBX3 MUTATED | 10 | 14 | 3 |
TBX3 WILD-TYPE | 260 | 399 | 271 |
P value = 0.0855 (Fisher's exact test), Q value = 1
Table S166. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TBX3 MUTATED | 8 | 8 | 8 | 1 | 2 |
TBX3 WILD-TYPE | 144 | 166 | 382 | 124 | 114 |
P value = 0.387 (Fisher's exact test), Q value = 1
Table S167. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TBX3 MUTATED | 6 | 7 | 2 |
TBX3 WILD-TYPE | 242 | 210 | 185 |
P value = 0.0244 (Fisher's exact test), Q value = 1
Table S168. Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TBX3 MUTATED | 1 | 4 | 2 | 1 | 6 | 1 |
TBX3 WILD-TYPE | 114 | 59 | 187 | 116 | 102 | 59 |
Figure S84. Get High-res Image Gene #14: 'TBX3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D14V12.png)
P value = 0.262 (Fisher's exact test), Q value = 1
Table S169. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
THEM5 MUTATED | 1 | 0 | 1 | 0 | 3 | 0 | 0 | 0 |
THEM5 WILD-TYPE | 20 | 38 | 113 | 97 | 105 | 73 | 19 | 39 |
P value = 0.871 (Fisher's exact test), Q value = 1
Table S170. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
THEM5 MUTATED | 1 | 2 | 1 | 0 | 1 |
THEM5 WILD-TYPE | 95 | 150 | 115 | 89 | 55 |
P value = 0.259 (Fisher's exact test), Q value = 1
Table S171. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
THEM5 MUTATED | 2 | 3 | 3 | 3 | 0 |
THEM5 WILD-TYPE | 365 | 223 | 88 | 238 | 37 |
P value = 0.29 (Fisher's exact test), Q value = 1
Table S172. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
THEM5 MUTATED | 0 | 1 | 3 | 1 | 3 |
THEM5 WILD-TYPE | 116 | 180 | 154 | 82 | 108 |
P value = 0.208 (Fisher's exact test), Q value = 1
Table S173. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
THEM5 MUTATED | 1 | 3 | 0 |
THEM5 WILD-TYPE | 145 | 126 | 118 |
P value = 0.122 (Fisher's exact test), Q value = 1
Table S174. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
THEM5 MUTATED | 2 | 0 | 0 | 2 | 0 |
THEM5 WILD-TYPE | 57 | 109 | 90 | 102 | 31 |
P value = 0.855 (Fisher's exact test), Q value = 1
Table S175. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
THEM5 MUTATED | 1 | 1 | 3 | 1 | 3 | 1 | 0 |
THEM5 WILD-TYPE | 178 | 134 | 212 | 155 | 222 | 47 | 15 |
P value = 0.994 (Fisher's exact test), Q value = 1
Table S176. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
THEM5 MUTATED | 1 | 3 | 2 | 2 | 2 | 0 |
THEM5 WILD-TYPE | 167 | 219 | 186 | 170 | 169 | 52 |
P value = 0.721 (Fisher's exact test), Q value = 1
Table S177. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
THEM5 MUTATED | 4 | 4 | 2 |
THEM5 WILD-TYPE | 266 | 409 | 272 |
P value = 0.825 (Fisher's exact test), Q value = 1
Table S178. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
THEM5 MUTATED | 1 | 2 | 6 | 1 | 0 |
THEM5 WILD-TYPE | 151 | 172 | 384 | 124 | 116 |
P value = 0.838 (Fisher's exact test), Q value = 1
Table S179. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
THEM5 MUTATED | 3 | 4 | 2 |
THEM5 WILD-TYPE | 245 | 213 | 185 |
P value = 0.484 (Fisher's exact test), Q value = 1
Table S180. Gene #15: 'THEM5 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
THEM5 MUTATED | 1 | 0 | 2 | 4 | 2 | 0 |
THEM5 WILD-TYPE | 114 | 63 | 187 | 113 | 106 | 60 |
P value = 0.88 (Fisher's exact test), Q value = 1
Table S181. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RB1 MUTATED | 0 | 0 | 2 | 4 | 2 | 2 | 0 | 0 |
RB1 WILD-TYPE | 21 | 38 | 112 | 93 | 106 | 71 | 19 | 39 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S182. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RB1 MUTATED | 2 | 1 | 4 | 3 | 0 |
RB1 WILD-TYPE | 94 | 151 | 112 | 86 | 56 |
P value = 0.0729 (Fisher's exact test), Q value = 1
Table S183. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RB1 MUTATED | 3 | 4 | 4 | 8 | 0 |
RB1 WILD-TYPE | 364 | 222 | 87 | 233 | 37 |
P value = 0.118 (Fisher's exact test), Q value = 1
Table S184. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RB1 MUTATED | 5 | 2 | 2 | 2 | 0 |
RB1 WILD-TYPE | 111 | 179 | 155 | 81 | 111 |
P value = 0.442 (Fisher's exact test), Q value = 1
Table S185. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RB1 MUTATED | 5 | 3 | 1 |
RB1 WILD-TYPE | 141 | 126 | 117 |
P value = 0.773 (Fisher's exact test), Q value = 1
Table S186. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RB1 MUTATED | 1 | 2 | 4 | 2 | 0 |
RB1 WILD-TYPE | 58 | 107 | 86 | 102 | 31 |
P value = 0.186 (Fisher's exact test), Q value = 1
Table S187. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RB1 MUTATED | 7 | 0 | 4 | 5 | 3 | 0 | 0 |
RB1 WILD-TYPE | 172 | 135 | 211 | 151 | 222 | 48 | 15 |
P value = 0.0279 (Fisher's exact test), Q value = 1
Table S188. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RB1 MUTATED | 6 | 0 | 2 | 6 | 4 | 1 |
RB1 WILD-TYPE | 162 | 222 | 186 | 166 | 167 | 51 |
Figure S85. Get High-res Image Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D16V8.png)
P value = 0.0507 (Fisher's exact test), Q value = 1
Table S189. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RB1 MUTATED | 1 | 7 | 8 |
RB1 WILD-TYPE | 269 | 406 | 266 |
P value = 0.0312 (Fisher's exact test), Q value = 1
Table S190. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RB1 MUTATED | 0 | 2 | 6 | 2 | 6 |
RB1 WILD-TYPE | 152 | 172 | 384 | 123 | 110 |
Figure S86. Get High-res Image Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D16V10.png)
P value = 0.00831 (Fisher's exact test), Q value = 1
Table S191. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RB1 MUTATED | 5 | 0 | 7 |
RB1 WILD-TYPE | 243 | 217 | 180 |
Figure S87. Get High-res Image Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D16V11.png)
P value = 0.125 (Fisher's exact test), Q value = 1
Table S192. Gene #16: 'RB1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RB1 MUTATED | 4 | 1 | 2 | 2 | 0 | 3 |
RB1 WILD-TYPE | 111 | 62 | 187 | 115 | 108 | 57 |
P value = 0.574 (Fisher's exact test), Q value = 1
Table S193. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
NF1 MUTATED | 1 | 0 | 2 | 3 | 4 | 2 | 0 | 3 |
NF1 WILD-TYPE | 20 | 38 | 112 | 94 | 104 | 71 | 19 | 36 |
P value = 0.804 (Fisher's exact test), Q value = 1
Table S194. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
NF1 MUTATED | 2 | 4 | 3 | 3 | 3 |
NF1 WILD-TYPE | 94 | 148 | 113 | 86 | 53 |
P value = 0.481 (Fisher's exact test), Q value = 1
Table S195. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
NF1 MUTATED | 13 | 3 | 3 | 7 | 0 |
NF1 WILD-TYPE | 354 | 223 | 88 | 234 | 37 |
P value = 0.152 (Fisher's exact test), Q value = 1
Table S196. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
NF1 MUTATED | 3 | 2 | 7 | 1 | 6 |
NF1 WILD-TYPE | 113 | 179 | 150 | 82 | 105 |
P value = 0.937 (Fisher's exact test), Q value = 1
Table S197. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
NF1 MUTATED | 4 | 5 | 4 |
NF1 WILD-TYPE | 142 | 124 | 114 |
P value = 0.261 (Fisher's exact test), Q value = 1
Table S198. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
NF1 MUTATED | 0 | 6 | 2 | 5 | 0 |
NF1 WILD-TYPE | 59 | 103 | 88 | 99 | 31 |
P value = 0.0919 (Fisher's exact test), Q value = 1
Table S199. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
NF1 MUTATED | 6 | 2 | 4 | 8 | 3 | 3 | 1 |
NF1 WILD-TYPE | 173 | 133 | 211 | 148 | 222 | 45 | 14 |
P value = 0.0989 (Fisher's exact test), Q value = 1
Table S200. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
NF1 MUTATED | 6 | 7 | 1 | 9 | 3 | 1 |
NF1 WILD-TYPE | 162 | 215 | 187 | 163 | 168 | 51 |
P value = 0.847 (Fisher's exact test), Q value = 1
Table S201. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
NF1 MUTATED | 8 | 12 | 6 |
NF1 WILD-TYPE | 262 | 401 | 268 |
P value = 0.87 (Fisher's exact test), Q value = 1
Table S202. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
NF1 MUTATED | 4 | 4 | 11 | 5 | 2 |
NF1 WILD-TYPE | 148 | 170 | 379 | 120 | 114 |
P value = 0.479 (Fisher's exact test), Q value = 1
Table S203. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
NF1 MUTATED | 9 | 4 | 4 |
NF1 WILD-TYPE | 239 | 213 | 183 |
P value = 0.758 (Fisher's exact test), Q value = 1
Table S204. Gene #17: 'NF1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
NF1 MUTATED | 3 | 1 | 7 | 1 | 3 | 2 |
NF1 WILD-TYPE | 112 | 62 | 182 | 116 | 105 | 58 |
P value = 0.35 (Fisher's exact test), Q value = 1
Table S205. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ACTL6B MUTATED | 1 | 0 | 1 | 2 | 0 | 2 | 0 | 0 |
ACTL6B WILD-TYPE | 20 | 38 | 113 | 95 | 108 | 71 | 19 | 39 |
P value = 0.287 (Fisher's exact test), Q value = 1
Table S206. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ACTL6B MUTATED | 1 | 0 | 2 | 2 | 1 |
ACTL6B WILD-TYPE | 95 | 152 | 114 | 87 | 55 |
P value = 0.0373 (Fisher's exact test), Q value = 1
Table S207. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ACTL6B MUTATED | 2 | 1 | 0 | 5 | 2 |
ACTL6B WILD-TYPE | 365 | 225 | 91 | 236 | 35 |
Figure S88. Get High-res Image Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D18V3.png)
P value = 0.287 (Fisher's exact test), Q value = 1
Table S208. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ACTL6B MUTATED | 3 | 3 | 1 | 0 | 0 |
ACTL6B WILD-TYPE | 113 | 178 | 156 | 83 | 111 |
P value = 0.864 (Fisher's exact test), Q value = 1
Table S209. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ACTL6B MUTATED | 2 | 1 | 2 |
ACTL6B WILD-TYPE | 144 | 128 | 116 |
P value = 0.353 (Fisher's exact test), Q value = 1
Table S210. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ACTL6B MUTATED | 0 | 3 | 2 | 0 | 0 |
ACTL6B WILD-TYPE | 59 | 106 | 88 | 104 | 31 |
P value = 0.667 (Fisher's exact test), Q value = 1
Table S211. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ACTL6B MUTATED | 3 | 0 | 2 | 2 | 2 | 1 | 0 |
ACTL6B WILD-TYPE | 176 | 135 | 213 | 154 | 223 | 47 | 15 |
P value = 0.628 (Fisher's exact test), Q value = 1
Table S212. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ACTL6B MUTATED | 3 | 1 | 1 | 2 | 2 | 1 |
ACTL6B WILD-TYPE | 165 | 221 | 187 | 170 | 169 | 51 |
P value = 0.665 (Fisher's exact test), Q value = 1
Table S213. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ACTL6B MUTATED | 2 | 6 | 2 |
ACTL6B WILD-TYPE | 268 | 407 | 272 |
P value = 0.754 (Fisher's exact test), Q value = 1
Table S214. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ACTL6B MUTATED | 1 | 3 | 3 | 2 | 1 |
ACTL6B WILD-TYPE | 151 | 171 | 387 | 123 | 115 |
P value = 0.861 (Fisher's exact test), Q value = 1
Table S215. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ACTL6B MUTATED | 2 | 1 | 2 |
ACTL6B WILD-TYPE | 246 | 216 | 185 |
P value = 1 (Fisher's exact test), Q value = 1
Table S216. Gene #18: 'ACTL6B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ACTL6B MUTATED | 1 | 0 | 2 | 1 | 1 | 0 |
ACTL6B WILD-TYPE | 114 | 63 | 187 | 116 | 107 | 60 |
P value = 0.665 (Fisher's exact test), Q value = 1
Table S217. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SPEN MUTATED | 0 | 1 | 4 | 2 | 8 | 3 | 1 | 1 |
SPEN WILD-TYPE | 21 | 37 | 110 | 95 | 100 | 70 | 18 | 38 |
P value = 0.789 (Fisher's exact test), Q value = 1
Table S218. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SPEN MUTATED | 4 | 8 | 5 | 2 | 1 |
SPEN WILD-TYPE | 92 | 144 | 111 | 87 | 55 |
P value = 0.496 (Fisher's exact test), Q value = 1
Table S219. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SPEN MUTATED | 15 | 5 | 4 | 5 | 1 |
SPEN WILD-TYPE | 352 | 221 | 87 | 236 | 36 |
P value = 0.274 (Fisher's exact test), Q value = 1
Table S220. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SPEN MUTATED | 1 | 6 | 9 | 3 | 5 |
SPEN WILD-TYPE | 115 | 175 | 148 | 80 | 106 |
P value = 0.943 (Fisher's exact test), Q value = 1
Table S221. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SPEN MUTATED | 6 | 4 | 4 |
SPEN WILD-TYPE | 140 | 125 | 114 |
P value = 0.34 (Fisher's exact test), Q value = 1
Table S222. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SPEN MUTATED | 1 | 5 | 2 | 3 | 3 |
SPEN WILD-TYPE | 58 | 104 | 88 | 101 | 28 |
P value = 0.16 (Fisher's exact test), Q value = 1
Table S223. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SPEN MUTATED | 2 | 4 | 10 | 5 | 7 | 2 | 2 |
SPEN WILD-TYPE | 177 | 131 | 205 | 151 | 218 | 46 | 13 |
P value = 0.168 (Fisher's exact test), Q value = 1
Table S224. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SPEN MUTATED | 2 | 7 | 7 | 11 | 4 | 1 |
SPEN WILD-TYPE | 166 | 215 | 181 | 161 | 167 | 51 |
P value = 0.025 (Fisher's exact test), Q value = 1
Table S225. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SPEN MUTATED | 10 | 19 | 3 |
SPEN WILD-TYPE | 260 | 394 | 271 |
Figure S89. Get High-res Image Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D19V9.png)
P value = 0.0291 (Fisher's exact test), Q value = 1
Table S226. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SPEN MUTATED | 3 | 7 | 20 | 2 | 0 |
SPEN WILD-TYPE | 149 | 167 | 370 | 123 | 116 |
Figure S90. Get High-res Image Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D19V10.png)
P value = 0.362 (Fisher's exact test), Q value = 1
Table S227. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SPEN MUTATED | 5 | 7 | 2 |
SPEN WILD-TYPE | 243 | 210 | 185 |
P value = 0.0653 (Fisher's exact test), Q value = 1
Table S228. Gene #19: 'SPEN MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SPEN MUTATED | 0 | 1 | 7 | 1 | 5 | 0 |
SPEN WILD-TYPE | 115 | 62 | 182 | 116 | 103 | 60 |
P value = 0.64 (Fisher's exact test), Q value = 1
Table S229. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CDKN1B MUTATED | 0 | 0 | 1 | 0 | 3 | 1 | 0 | 1 |
CDKN1B WILD-TYPE | 21 | 38 | 113 | 97 | 105 | 72 | 19 | 38 |
P value = 0.738 (Fisher's exact test), Q value = 1
Table S230. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CDKN1B MUTATED | 1 | 3 | 1 | 0 | 1 |
CDKN1B WILD-TYPE | 95 | 149 | 115 | 89 | 55 |
P value = 0.203 (Fisher's exact test), Q value = 1
Table S231. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CDKN1B MUTATED | 5 | 1 | 3 | 1 | 0 |
CDKN1B WILD-TYPE | 362 | 225 | 88 | 240 | 37 |
P value = 0.321 (Fisher's exact test), Q value = 1
Table S232. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CDKN1B MUTATED | 0 | 3 | 0 | 1 | 1 |
CDKN1B WILD-TYPE | 116 | 178 | 157 | 82 | 110 |
P value = 0.738 (Fisher's exact test), Q value = 1
Table S233. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CDKN1B MUTATED | 1 | 2 | 2 |
CDKN1B WILD-TYPE | 145 | 127 | 116 |
P value = 0.441 (Fisher's exact test), Q value = 1
Table S234. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CDKN1B MUTATED | 2 | 2 | 0 | 1 | 0 |
CDKN1B WILD-TYPE | 57 | 107 | 90 | 103 | 31 |
P value = 0.0825 (Fisher's exact test), Q value = 1
Table S235. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CDKN1B MUTATED | 0 | 1 | 5 | 2 | 1 | 0 | 1 |
CDKN1B WILD-TYPE | 179 | 134 | 210 | 154 | 224 | 48 | 14 |
P value = 0.174 (Fisher's exact test), Q value = 1
Table S236. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CDKN1B MUTATED | 0 | 4 | 4 | 2 | 0 | 0 |
CDKN1B WILD-TYPE | 168 | 218 | 184 | 170 | 171 | 52 |
P value = 0.0232 (Fisher's exact test), Q value = 1
Table S237. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CDKN1B MUTATED | 6 | 4 | 0 |
CDKN1B WILD-TYPE | 264 | 409 | 274 |
Figure S91. Get High-res Image Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D20V9.png)
P value = 0.595 (Fisher's exact test), Q value = 1
Table S238. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CDKN1B MUTATED | 2 | 2 | 6 | 0 | 0 |
CDKN1B WILD-TYPE | 150 | 172 | 384 | 125 | 116 |
P value = 0.331 (Fisher's exact test), Q value = 1
Table S239. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CDKN1B MUTATED | 3 | 3 | 0 |
CDKN1B WILD-TYPE | 245 | 214 | 187 |
P value = 0.406 (Fisher's exact test), Q value = 1
Table S240. Gene #20: 'CDKN1B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CDKN1B MUTATED | 0 | 1 | 3 | 0 | 2 | 0 |
CDKN1B WILD-TYPE | 115 | 62 | 186 | 117 | 106 | 60 |
P value = 0.74 (Fisher's exact test), Q value = 1
Table S241. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
NCOR1 MUTATED | 0 | 2 | 4 | 3 | 7 | 3 | 0 | 0 |
NCOR1 WILD-TYPE | 21 | 36 | 110 | 94 | 101 | 70 | 19 | 39 |
P value = 0.967 (Fisher's exact test), Q value = 1
Table S242. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
NCOR1 MUTATED | 3 | 6 | 4 | 3 | 3 |
NCOR1 WILD-TYPE | 93 | 146 | 112 | 86 | 53 |
P value = 0.969 (Fisher's exact test), Q value = 1
Table S243. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
NCOR1 MUTATED | 16 | 10 | 4 | 8 | 1 |
NCOR1 WILD-TYPE | 351 | 216 | 87 | 233 | 36 |
P value = 0.646 (Fisher's exact test), Q value = 1
Table S244. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
NCOR1 MUTATED | 4 | 7 | 9 | 6 | 4 |
NCOR1 WILD-TYPE | 112 | 174 | 148 | 77 | 107 |
P value = 0.436 (Fisher's exact test), Q value = 1
Table S245. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
NCOR1 MUTATED | 5 | 2 | 5 |
NCOR1 WILD-TYPE | 141 | 127 | 113 |
P value = 0.524 (Fisher's exact test), Q value = 1
Table S246. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
NCOR1 MUTATED | 1 | 5 | 2 | 2 | 2 |
NCOR1 WILD-TYPE | 58 | 104 | 88 | 102 | 29 |
P value = 0.656 (Fisher's exact test), Q value = 1
Table S247. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
NCOR1 MUTATED | 6 | 6 | 10 | 10 | 7 | 1 | 1 |
NCOR1 WILD-TYPE | 173 | 129 | 205 | 146 | 218 | 47 | 14 |
P value = 0.161 (Fisher's exact test), Q value = 1
Table S248. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
NCOR1 MUTATED | 6 | 7 | 8 | 14 | 4 | 2 |
NCOR1 WILD-TYPE | 162 | 215 | 180 | 158 | 167 | 50 |
P value = 0.862 (Fisher's exact test), Q value = 1
Table S249. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
NCOR1 MUTATED | 12 | 19 | 10 |
NCOR1 WILD-TYPE | 258 | 394 | 264 |
P value = 0.301 (Fisher's exact test), Q value = 1
Table S250. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
NCOR1 MUTATED | 7 | 3 | 22 | 5 | 4 |
NCOR1 WILD-TYPE | 145 | 171 | 368 | 120 | 112 |
P value = 1 (Fisher's exact test), Q value = 1
Table S251. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
NCOR1 MUTATED | 9 | 8 | 7 |
NCOR1 WILD-TYPE | 239 | 209 | 180 |
P value = 0.179 (Fisher's exact test), Q value = 1
Table S252. Gene #21: 'NCOR1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
NCOR1 MUTATED | 3 | 1 | 10 | 1 | 7 | 2 |
NCOR1 WILD-TYPE | 112 | 62 | 179 | 116 | 101 | 58 |
P value = 0.845 (Fisher's exact test), Q value = 1
Table S253. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SF3B1 MUTATED | 0 | 0 | 1 | 1 | 3 | 2 | 0 | 1 |
SF3B1 WILD-TYPE | 21 | 38 | 113 | 96 | 105 | 71 | 19 | 38 |
P value = 0.845 (Fisher's exact test), Q value = 1
Table S254. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SF3B1 MUTATED | 1 | 4 | 2 | 1 | 0 |
SF3B1 WILD-TYPE | 95 | 148 | 114 | 88 | 56 |
P value = 0.43 (Fisher's exact test), Q value = 1
Table S255. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SF3B1 MUTATED | 6 | 7 | 1 | 2 | 0 |
SF3B1 WILD-TYPE | 361 | 219 | 90 | 239 | 37 |
P value = 0.0462 (Fisher's exact test), Q value = 1
Table S256. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SF3B1 MUTATED | 0 | 7 | 5 | 2 | 0 |
SF3B1 WILD-TYPE | 116 | 174 | 152 | 81 | 111 |
Figure S92. Get High-res Image Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D22V4.png)
P value = 0.451 (Fisher's exact test), Q value = 1
Table S257. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SF3B1 MUTATED | 1 | 1 | 3 |
SF3B1 WILD-TYPE | 145 | 128 | 115 |
P value = 0.164 (Fisher's exact test), Q value = 1
Table S258. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SF3B1 MUTATED | 0 | 4 | 1 | 0 | 0 |
SF3B1 WILD-TYPE | 59 | 105 | 89 | 104 | 31 |
P value = 0.53 (Fisher's exact test), Q value = 1
Table S259. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SF3B1 MUTATED | 1 | 3 | 6 | 3 | 2 | 1 | 0 |
SF3B1 WILD-TYPE | 178 | 132 | 209 | 153 | 223 | 47 | 15 |
P value = 0.709 (Fisher's exact test), Q value = 1
Table S260. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SF3B1 MUTATED | 1 | 5 | 4 | 4 | 2 | 0 |
SF3B1 WILD-TYPE | 167 | 217 | 184 | 168 | 169 | 52 |
P value = 0.0447 (Fisher's exact test), Q value = 1
Table S261. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SF3B1 MUTATED | 8 | 7 | 1 |
SF3B1 WILD-TYPE | 262 | 406 | 273 |
Figure S93. Get High-res Image Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D22V9.png)
P value = 0.643 (Fisher's exact test), Q value = 1
Table S262. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SF3B1 MUTATED | 3 | 5 | 5 | 1 | 2 |
SF3B1 WILD-TYPE | 149 | 169 | 385 | 124 | 114 |
P value = 0.672 (Fisher's exact test), Q value = 1
Table S263. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SF3B1 MUTATED | 4 | 3 | 1 |
SF3B1 WILD-TYPE | 244 | 214 | 186 |
P value = 0.28 (Fisher's exact test), Q value = 1
Table S264. Gene #22: 'SF3B1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SF3B1 MUTATED | 0 | 1 | 2 | 4 | 1 | 0 |
SF3B1 WILD-TYPE | 115 | 62 | 187 | 113 | 107 | 60 |
P value = 0.403 (Fisher's exact test), Q value = 1
Table S265. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZFP36L1 MUTATED | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 1 |
ZFP36L1 WILD-TYPE | 20 | 38 | 113 | 97 | 107 | 72 | 19 | 38 |
P value = 0.898 (Fisher's exact test), Q value = 1
Table S266. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZFP36L1 MUTATED | 1 | 2 | 2 | 0 | 0 |
ZFP36L1 WILD-TYPE | 95 | 150 | 114 | 89 | 56 |
P value = 0.00632 (Fisher's exact test), Q value = 1
Table S267. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZFP36L1 MUTATED | 1 | 4 | 3 | 0 | 1 |
ZFP36L1 WILD-TYPE | 366 | 222 | 88 | 241 | 36 |
Figure S94. Get High-res Image Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D23V3.png)
P value = 0.055 (Fisher's exact test), Q value = 1
Table S268. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZFP36L1 MUTATED | 1 | 0 | 4 | 0 | 0 |
ZFP36L1 WILD-TYPE | 115 | 181 | 153 | 83 | 111 |
P value = 0.0264 (Fisher's exact test), Q value = 1
Table S269. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ZFP36L1 MUTATED | 0 | 0 | 3 |
ZFP36L1 WILD-TYPE | 146 | 129 | 115 |
Figure S95. Get High-res Image Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D23V5.png)
P value = 0.231 (Fisher's exact test), Q value = 1
Table S270. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ZFP36L1 MUTATED | 0 | 3 | 0 | 0 | 0 |
ZFP36L1 WILD-TYPE | 59 | 106 | 90 | 104 | 31 |
P value = 0.454 (Fisher's exact test), Q value = 1
Table S271. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZFP36L1 MUTATED | 1 | 0 | 1 | 2 | 5 | 0 | 0 |
ZFP36L1 WILD-TYPE | 178 | 135 | 214 | 154 | 220 | 48 | 15 |
P value = 0.156 (Fisher's exact test), Q value = 1
Table S272. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZFP36L1 MUTATED | 1 | 1 | 0 | 2 | 4 | 1 |
ZFP36L1 WILD-TYPE | 167 | 221 | 188 | 170 | 167 | 51 |
P value = 0.532 (Fisher's exact test), Q value = 1
Table S273. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZFP36L1 MUTATED | 3 | 5 | 1 |
ZFP36L1 WILD-TYPE | 267 | 408 | 273 |
P value = 0.655 (Fisher's exact test), Q value = 1
Table S274. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZFP36L1 MUTATED | 0 | 2 | 4 | 1 | 2 |
ZFP36L1 WILD-TYPE | 152 | 172 | 386 | 124 | 114 |
P value = 1 (Fisher's exact test), Q value = 1
Table S275. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZFP36L1 MUTATED | 2 | 2 | 1 |
ZFP36L1 WILD-TYPE | 246 | 215 | 186 |
P value = 0.859 (Fisher's exact test), Q value = 1
Table S276. Gene #23: 'ZFP36L1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZFP36L1 MUTATED | 1 | 0 | 2 | 1 | 0 | 1 |
ZFP36L1 WILD-TYPE | 114 | 63 | 187 | 116 | 108 | 59 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S277. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
KRAS MUTATED | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 1 |
KRAS WILD-TYPE | 21 | 38 | 114 | 96 | 106 | 73 | 19 | 38 |
P value = 0.632 (Fisher's exact test), Q value = 1
Table S278. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
KRAS MUTATED | 0 | 2 | 1 | 0 | 1 |
KRAS WILD-TYPE | 96 | 150 | 115 | 89 | 55 |
P value = 0.353 (Fisher's exact test), Q value = 1
Table S279. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
KRAS MUTATED | 5 | 0 | 0 | 1 | 0 |
KRAS WILD-TYPE | 362 | 226 | 91 | 240 | 37 |
P value = 0.258 (Fisher's exact test), Q value = 1
Table S280. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
KRAS MUTATED | 0 | 2 | 0 | 0 | 2 |
KRAS WILD-TYPE | 116 | 179 | 157 | 83 | 109 |
P value = 0.2 (Fisher's exact test), Q value = 1
Table S281. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
KRAS MUTATED | 0 | 1 | 2 |
KRAS WILD-TYPE | 146 | 128 | 116 |
P value = 0.712 (Fisher's exact test), Q value = 1
Table S282. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
KRAS MUTATED | 1 | 1 | 1 | 0 | 0 |
KRAS WILD-TYPE | 58 | 108 | 89 | 104 | 31 |
P value = 0.315 (Fisher's exact test), Q value = 1
Table S283. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
KRAS MUTATED | 0 | 1 | 3 | 2 | 0 | 0 | 0 |
KRAS WILD-TYPE | 179 | 134 | 212 | 154 | 225 | 48 | 15 |
P value = 0.37 (Fisher's exact test), Q value = 1
Table S284. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
KRAS MUTATED | 0 | 2 | 2 | 1 | 0 | 1 |
KRAS WILD-TYPE | 168 | 220 | 186 | 171 | 171 | 51 |
P value = 0.667 (Fisher's exact test), Q value = 1
Table S285. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
KRAS MUTATED | 1 | 4 | 1 |
KRAS WILD-TYPE | 269 | 409 | 273 |
P value = 0.642 (Fisher's exact test), Q value = 1
Table S286. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
KRAS MUTATED | 1 | 0 | 4 | 0 | 1 |
KRAS WILD-TYPE | 151 | 174 | 386 | 125 | 115 |
P value = 0.743 (Fisher's exact test), Q value = 1
Table S287. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
KRAS MUTATED | 3 | 1 | 1 |
KRAS WILD-TYPE | 245 | 216 | 186 |
P value = 0.103 (Fisher's exact test), Q value = 1
Table S288. Gene #24: 'KRAS MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
KRAS MUTATED | 0 | 2 | 2 | 0 | 0 | 1 |
KRAS WILD-TYPE | 115 | 61 | 187 | 117 | 108 | 59 |
P value = 0.783 (Fisher's exact test), Q value = 1
Table S289. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TCP11 MUTATED | 0 | 1 | 2 | 1 | 1 | 0 | 0 | 1 |
TCP11 WILD-TYPE | 21 | 37 | 112 | 96 | 107 | 73 | 19 | 38 |
P value = 0.512 (Fisher's exact test), Q value = 1
Table S290. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TCP11 MUTATED | 2 | 3 | 0 | 1 | 0 |
TCP11 WILD-TYPE | 94 | 149 | 116 | 88 | 56 |
P value = 0.481 (Fisher's exact test), Q value = 1
Table S291. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TCP11 MUTATED | 3 | 1 | 0 | 1 | 1 |
TCP11 WILD-TYPE | 364 | 225 | 91 | 240 | 36 |
P value = 0.863 (Fisher's exact test), Q value = 1
Table S292. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TCP11 MUTATED | 2 | 1 | 2 |
TCP11 WILD-TYPE | 144 | 128 | 116 |
P value = 0.919 (Fisher's exact test), Q value = 1
Table S293. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TCP11 MUTATED | 0 | 2 | 1 | 2 | 0 |
TCP11 WILD-TYPE | 59 | 107 | 89 | 102 | 31 |
P value = 0.771 (Fisher's exact test), Q value = 1
Table S294. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TCP11 MUTATED | 1 | 2 | 1 | 0 | 2 | 0 | 0 |
TCP11 WILD-TYPE | 178 | 133 | 214 | 156 | 223 | 48 | 15 |
P value = 0.773 (Fisher's exact test), Q value = 1
Table S295. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TCP11 MUTATED | 1 | 3 | 1 | 1 | 0 | 0 |
TCP11 WILD-TYPE | 167 | 219 | 187 | 171 | 171 | 52 |
P value = 0.887 (Fisher's exact test), Q value = 1
Table S296. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TCP11 MUTATED | 2 | 3 | 1 |
TCP11 WILD-TYPE | 268 | 410 | 273 |
P value = 0.73 (Fisher's exact test), Q value = 1
Table S297. Gene #25: 'TCP11 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TCP11 MUTATED | 2 | 1 | 2 | 1 | 0 |
TCP11 WILD-TYPE | 150 | 173 | 388 | 124 | 116 |
P value = 0.623 (Fisher's exact test), Q value = 1
Table S298. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
AQP12A MUTATED | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
AQP12A WILD-TYPE | 21 | 37 | 113 | 97 | 107 | 73 | 19 | 39 |
P value = 0.733 (Fisher's exact test), Q value = 1
Table S299. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
AQP12A MUTATED | 1 | 2 | 0 | 0 | 0 |
AQP12A WILD-TYPE | 95 | 150 | 116 | 89 | 56 |
P value = 0.281 (Fisher's exact test), Q value = 1
Table S300. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
AQP12A MUTATED | 1 | 4 | 0 | 1 | 0 |
AQP12A WILD-TYPE | 366 | 222 | 91 | 240 | 37 |
P value = 0.166 (Fisher's exact test), Q value = 1
Table S301. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
AQP12A MUTATED | 1 | 0 | 3 | 0 | 0 |
AQP12A WILD-TYPE | 115 | 181 | 154 | 83 | 111 |
P value = 0.2 (Fisher's exact test), Q value = 1
Table S302. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
AQP12A MUTATED | 0 | 1 | 2 |
AQP12A WILD-TYPE | 146 | 128 | 116 |
P value = 0.134 (Fisher's exact test), Q value = 1
Table S303. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
AQP12A MUTATED | 0 | 0 | 0 | 3 | 0 |
AQP12A WILD-TYPE | 59 | 109 | 90 | 101 | 31 |
P value = 0.742 (Fisher's exact test), Q value = 1
Table S304. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
AQP12A MUTATED | 0 | 1 | 2 | 2 | 1 | 0 | 0 |
AQP12A WILD-TYPE | 179 | 134 | 213 | 154 | 224 | 48 | 15 |
P value = 0.949 (Fisher's exact test), Q value = 1
Table S305. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
AQP12A MUTATED | 1 | 1 | 1 | 1 | 2 | 0 |
AQP12A WILD-TYPE | 167 | 221 | 187 | 171 | 169 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S306. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
AQP12A MUTATED | 1 | 3 | 2 |
AQP12A WILD-TYPE | 269 | 410 | 272 |
P value = 0.287 (Fisher's exact test), Q value = 1
Table S307. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
AQP12A MUTATED | 0 | 3 | 2 | 1 | 0 |
AQP12A WILD-TYPE | 152 | 171 | 388 | 124 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S308. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
AQP12A MUTATED | 2 | 1 | 1 |
AQP12A WILD-TYPE | 246 | 216 | 186 |
P value = 0.902 (Fisher's exact test), Q value = 1
Table S309. Gene #26: 'AQP12A MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
AQP12A MUTATED | 1 | 0 | 2 | 0 | 1 | 0 |
AQP12A WILD-TYPE | 114 | 63 | 187 | 117 | 107 | 60 |
P value = 0.34 (Fisher's exact test), Q value = 1
Table S310. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
DLG1 MUTATED | 0 | 2 | 1 | 0 | 2 | 2 | 0 | 0 |
DLG1 WILD-TYPE | 21 | 36 | 113 | 97 | 106 | 71 | 19 | 39 |
P value = 0.322 (Fisher's exact test), Q value = 1
Table S311. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
DLG1 MUTATED | 0 | 4 | 2 | 0 | 1 |
DLG1 WILD-TYPE | 96 | 148 | 114 | 89 | 55 |
P value = 0.594 (Fisher's exact test), Q value = 1
Table S312. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
DLG1 MUTATED | 6 | 1 | 1 | 5 | 0 |
DLG1 WILD-TYPE | 361 | 225 | 90 | 236 | 37 |
P value = 0.102 (Fisher's exact test), Q value = 1
Table S313. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
DLG1 MUTATED | 3 | 1 | 1 | 0 | 4 |
DLG1 WILD-TYPE | 113 | 180 | 156 | 83 | 107 |
P value = 0.892 (Fisher's exact test), Q value = 1
Table S314. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
DLG1 MUTATED | 2 | 3 | 2 |
DLG1 WILD-TYPE | 144 | 126 | 116 |
P value = 0.0959 (Fisher's exact test), Q value = 1
Table S315. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
DLG1 MUTATED | 2 | 2 | 0 | 1 | 2 |
DLG1 WILD-TYPE | 57 | 107 | 90 | 103 | 29 |
P value = 0.0726 (Fisher's exact test), Q value = 1
Table S316. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
DLG1 MUTATED | 2 | 2 | 1 | 5 | 1 | 1 | 1 |
DLG1 WILD-TYPE | 177 | 133 | 214 | 151 | 224 | 47 | 14 |
P value = 0.136 (Fisher's exact test), Q value = 1
Table S317. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
DLG1 MUTATED | 1 | 4 | 2 | 4 | 0 | 2 |
DLG1 WILD-TYPE | 167 | 218 | 186 | 168 | 171 | 50 |
P value = 0.244 (Fisher's exact test), Q value = 1
Table S318. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
DLG1 MUTATED | 3 | 3 | 6 |
DLG1 WILD-TYPE | 267 | 410 | 268 |
P value = 0.0194 (Fisher's exact test), Q value = 1
Table S319. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
DLG1 MUTATED | 0 | 1 | 6 | 0 | 5 |
DLG1 WILD-TYPE | 152 | 173 | 384 | 125 | 111 |
Figure S96. Get High-res Image Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D27V10.png)
P value = 0.744 (Fisher's exact test), Q value = 1
Table S320. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
DLG1 MUTATED | 2 | 3 | 3 |
DLG1 WILD-TYPE | 246 | 214 | 184 |
P value = 0.431 (Fisher's exact test), Q value = 1
Table S321. Gene #27: 'DLG1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
DLG1 MUTATED | 1 | 1 | 3 | 0 | 1 | 2 |
DLG1 WILD-TYPE | 114 | 62 | 186 | 117 | 107 | 58 |
P value = 0.74 (Fisher's exact test), Q value = 1
Table S322. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MYB MUTATED | 0 | 0 | 2 | 2 | 4 | 0 | 0 | 1 |
MYB WILD-TYPE | 21 | 38 | 112 | 95 | 104 | 73 | 19 | 38 |
P value = 0.0284 (Fisher's exact test), Q value = 1
Table S323. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MYB MUTATED | 0 | 2 | 1 | 2 | 4 |
MYB WILD-TYPE | 96 | 150 | 115 | 87 | 52 |
Figure S97. Get High-res Image Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D28V2.png)
P value = 0.266 (Fisher's exact test), Q value = 1
Table S324. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MYB MUTATED | 6 | 1 | 3 | 2 | 0 |
MYB WILD-TYPE | 361 | 225 | 88 | 239 | 37 |
P value = 0.619 (Fisher's exact test), Q value = 1
Table S325. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MYB MUTATED | 2 | 1 | 1 | 1 | 0 |
MYB WILD-TYPE | 114 | 180 | 156 | 82 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S326. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MYB MUTATED | 2 | 2 | 1 |
MYB WILD-TYPE | 144 | 127 | 117 |
P value = 0.685 (Fisher's exact test), Q value = 1
Table S327. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MYB MUTATED | 2 | 1 | 1 | 1 | 0 |
MYB WILD-TYPE | 57 | 108 | 89 | 103 | 31 |
P value = 0.901 (Fisher's exact test), Q value = 1
Table S328. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MYB MUTATED | 3 | 1 | 3 | 1 | 3 | 1 | 0 |
MYB WILD-TYPE | 176 | 134 | 212 | 155 | 222 | 47 | 15 |
P value = 0.11 (Fisher's exact test), Q value = 1
Table S329. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MYB MUTATED | 3 | 2 | 6 | 1 | 0 | 0 |
MYB WILD-TYPE | 165 | 220 | 182 | 171 | 171 | 52 |
P value = 0.579 (Fisher's exact test), Q value = 1
Table S330. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MYB MUTATED | 3 | 7 | 2 |
MYB WILD-TYPE | 267 | 406 | 272 |
P value = 0.784 (Fisher's exact test), Q value = 1
Table S331. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MYB MUTATED | 1 | 4 | 5 | 1 | 1 |
MYB WILD-TYPE | 151 | 170 | 385 | 124 | 115 |
P value = 0.0538 (Fisher's exact test), Q value = 1
Table S332. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MYB MUTATED | 5 | 0 | 1 |
MYB WILD-TYPE | 243 | 217 | 186 |
P value = 0.781 (Fisher's exact test), Q value = 1
Table S333. Gene #28: 'MYB MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MYB MUTATED | 2 | 1 | 2 | 1 | 0 | 0 |
MYB WILD-TYPE | 113 | 62 | 187 | 116 | 108 | 60 |
P value = 0.968 (Fisher's exact test), Q value = 1
Table S334. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RPGR MUTATED | 0 | 1 | 3 | 3 | 2 | 2 | 1 | 1 |
RPGR WILD-TYPE | 21 | 37 | 111 | 94 | 106 | 71 | 18 | 38 |
P value = 0.703 (Fisher's exact test), Q value = 1
Table S335. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RPGR MUTATED | 3 | 5 | 2 | 3 | 0 |
RPGR WILD-TYPE | 93 | 147 | 114 | 86 | 56 |
P value = 0.952 (Fisher's exact test), Q value = 1
Table S336. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RPGR MUTATED | 6 | 5 | 2 | 4 | 0 |
RPGR WILD-TYPE | 361 | 221 | 89 | 237 | 37 |
P value = 0.535 (Fisher's exact test), Q value = 1
Table S337. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RPGR MUTATED | 2 | 2 | 5 | 1 | 4 |
RPGR WILD-TYPE | 114 | 179 | 152 | 82 | 107 |
P value = 0.743 (Fisher's exact test), Q value = 1
Table S338. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RPGR MUTATED | 5 | 4 | 2 |
RPGR WILD-TYPE | 141 | 125 | 116 |
P value = 0.238 (Fisher's exact test), Q value = 1
Table S339. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RPGR MUTATED | 0 | 2 | 3 | 6 | 0 |
RPGR WILD-TYPE | 59 | 107 | 87 | 98 | 31 |
P value = 0.597 (Fisher's exact test), Q value = 1
Table S340. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RPGR MUTATED | 4 | 1 | 4 | 4 | 5 | 0 | 1 |
RPGR WILD-TYPE | 175 | 134 | 211 | 152 | 220 | 48 | 14 |
P value = 0.57 (Fisher's exact test), Q value = 1
Table S341. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RPGR MUTATED | 4 | 4 | 1 | 5 | 4 | 1 |
RPGR WILD-TYPE | 164 | 218 | 187 | 167 | 167 | 51 |
P value = 0.572 (Fisher's exact test), Q value = 1
Table S342. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RPGR MUTATED | 3 | 9 | 6 |
RPGR WILD-TYPE | 267 | 404 | 268 |
P value = 0.308 (Fisher's exact test), Q value = 1
Table S343. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RPGR MUTATED | 2 | 3 | 9 | 0 | 4 |
RPGR WILD-TYPE | 150 | 171 | 381 | 125 | 112 |
P value = 0.768 (Fisher's exact test), Q value = 1
Table S344. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RPGR MUTATED | 4 | 2 | 3 |
RPGR WILD-TYPE | 244 | 215 | 184 |
P value = 0.896 (Fisher's exact test), Q value = 1
Table S345. Gene #29: 'RPGR MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RPGR MUTATED | 2 | 0 | 4 | 1 | 1 | 1 |
RPGR WILD-TYPE | 113 | 63 | 185 | 116 | 107 | 59 |
P value = 0.158 (Fisher's exact test), Q value = 1
Table S346. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TBL1XR1 MUTATED | 1 | 0 | 1 | 0 | 5 | 1 | 0 | 0 |
TBL1XR1 WILD-TYPE | 20 | 38 | 113 | 97 | 103 | 72 | 19 | 39 |
P value = 0.0823 (Fisher's exact test), Q value = 1
Table S347. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TBL1XR1 MUTATED | 0 | 3 | 2 | 0 | 3 |
TBL1XR1 WILD-TYPE | 96 | 149 | 114 | 89 | 53 |
P value = 0.0501 (Fisher's exact test), Q value = 1
Table S348. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TBL1XR1 MUTATED | 6 | 1 | 3 | 0 | 0 |
TBL1XR1 WILD-TYPE | 361 | 225 | 88 | 241 | 37 |
P value = 0.926 (Fisher's exact test), Q value = 1
Table S349. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TBL1XR1 MUTATED | 0 | 1 | 1 | 0 | 1 |
TBL1XR1 WILD-TYPE | 116 | 180 | 156 | 83 | 110 |
P value = 0.448 (Fisher's exact test), Q value = 1
Table S350. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TBL1XR1 MUTATED | 2 | 4 | 1 |
TBL1XR1 WILD-TYPE | 144 | 125 | 117 |
P value = 0.134 (Fisher's exact test), Q value = 1
Table S351. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TBL1XR1 MUTATED | 3 | 2 | 0 | 1 | 1 |
TBL1XR1 WILD-TYPE | 56 | 107 | 90 | 103 | 30 |
P value = 0.0575 (Fisher's exact test), Q value = 1
Table S352. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TBL1XR1 MUTATED | 0 | 2 | 6 | 2 | 0 | 0 | 0 |
TBL1XR1 WILD-TYPE | 179 | 133 | 209 | 154 | 225 | 48 | 15 |
P value = 0.0342 (Fisher's exact test), Q value = 1
Table S353. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TBL1XR1 MUTATED | 0 | 3 | 6 | 1 | 0 | 0 |
TBL1XR1 WILD-TYPE | 168 | 219 | 182 | 171 | 171 | 52 |
Figure S98. Get High-res Image Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D30V8.png)
P value = 0.237 (Fisher's exact test), Q value = 1
Table S354. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TBL1XR1 MUTATED | 2 | 7 | 1 |
TBL1XR1 WILD-TYPE | 268 | 406 | 273 |
P value = 0.393 (Fisher's exact test), Q value = 1
Table S355. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TBL1XR1 MUTATED | 2 | 1 | 7 | 0 | 0 |
TBL1XR1 WILD-TYPE | 150 | 173 | 383 | 125 | 116 |
P value = 0.64 (Fisher's exact test), Q value = 1
Table S356. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TBL1XR1 MUTATED | 4 | 2 | 1 |
TBL1XR1 WILD-TYPE | 244 | 215 | 186 |
P value = 0.204 (Fisher's exact test), Q value = 1
Table S357. Gene #30: 'TBL1XR1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TBL1XR1 MUTATED | 0 | 1 | 5 | 0 | 1 | 0 |
TBL1XR1 WILD-TYPE | 115 | 62 | 184 | 117 | 107 | 60 |
P value = 0.74 (Fisher's exact test), Q value = 1
Table S358. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
KDM6A MUTATED | 0 | 1 | 1 | 2 | 3 | 0 | 0 | 1 |
KDM6A WILD-TYPE | 21 | 37 | 113 | 95 | 105 | 73 | 19 | 38 |
P value = 0.344 (Fisher's exact test), Q value = 1
Table S359. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
KDM6A MUTATED | 2 | 4 | 0 | 2 | 0 |
KDM6A WILD-TYPE | 94 | 148 | 116 | 87 | 56 |
P value = 0.234 (Fisher's exact test), Q value = 1
Table S360. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
KDM6A MUTATED | 5 | 3 | 4 | 3 | 1 |
KDM6A WILD-TYPE | 362 | 223 | 87 | 238 | 36 |
P value = 0.626 (Fisher's exact test), Q value = 1
Table S361. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
KDM6A MUTATED | 2 | 3 | 3 | 2 | 0 |
KDM6A WILD-TYPE | 114 | 178 | 154 | 81 | 111 |
P value = 0.639 (Fisher's exact test), Q value = 1
Table S362. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
KDM6A MUTATED | 4 | 2 | 1 |
KDM6A WILD-TYPE | 142 | 127 | 117 |
P value = 0.874 (Fisher's exact test), Q value = 1
Table S363. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
KDM6A MUTATED | 1 | 1 | 2 | 3 | 0 |
KDM6A WILD-TYPE | 58 | 108 | 88 | 101 | 31 |
P value = 0.557 (Fisher's exact test), Q value = 1
Table S364. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
KDM6A MUTATED | 5 | 3 | 1 | 2 | 4 | 1 | 0 |
KDM6A WILD-TYPE | 174 | 132 | 214 | 154 | 221 | 47 | 15 |
P value = 0.477 (Fisher's exact test), Q value = 1
Table S365. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
KDM6A MUTATED | 5 | 4 | 1 | 4 | 2 | 0 |
KDM6A WILD-TYPE | 163 | 218 | 187 | 168 | 169 | 52 |
P value = 0.855 (Fisher's exact test), Q value = 1
Table S366. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
KDM6A MUTATED | 5 | 6 | 5 |
KDM6A WILD-TYPE | 265 | 407 | 269 |
P value = 0.234 (Fisher's exact test), Q value = 1
Table S367. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
KDM6A MUTATED | 1 | 5 | 4 | 4 | 2 |
KDM6A WILD-TYPE | 151 | 169 | 386 | 121 | 114 |
P value = 0.144 (Fisher's exact test), Q value = 1
Table S368. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
KDM6A MUTATED | 6 | 1 | 5 |
KDM6A WILD-TYPE | 242 | 216 | 182 |
P value = 0.135 (Fisher's exact test), Q value = 1
Table S369. Gene #31: 'KDM6A MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
KDM6A MUTATED | 5 | 1 | 5 | 0 | 1 | 0 |
KDM6A WILD-TYPE | 110 | 62 | 184 | 117 | 107 | 60 |
P value = 0.397 (Fisher's exact test), Q value = 1
Table S370. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MYH9 MUTATED | 0 | 1 | 0 | 2 | 2 | 1 | 1 | 1 |
MYH9 WILD-TYPE | 21 | 37 | 114 | 95 | 106 | 72 | 18 | 38 |
P value = 0.423 (Fisher's exact test), Q value = 1
Table S371. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MYH9 MUTATED | 0 | 4 | 3 | 1 | 0 |
MYH9 WILD-TYPE | 96 | 148 | 113 | 88 | 56 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S372. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MYH9 MUTATED | 11 | 3 | 0 | 2 | 0 |
MYH9 WILD-TYPE | 356 | 223 | 91 | 239 | 37 |
P value = 0.571 (Fisher's exact test), Q value = 1
Table S373. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MYH9 MUTATED | 2 | 3 | 6 | 1 | 1 |
MYH9 WILD-TYPE | 114 | 178 | 151 | 82 | 110 |
P value = 0.821 (Fisher's exact test), Q value = 1
Table S374. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MYH9 MUTATED | 4 | 2 | 2 |
MYH9 WILD-TYPE | 142 | 127 | 116 |
P value = 0.0208 (Fisher's exact test), Q value = 1
Table S375. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MYH9 MUTATED | 1 | 3 | 1 | 0 | 3 |
MYH9 WILD-TYPE | 58 | 106 | 89 | 104 | 28 |
Figure S99. Get High-res Image Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D32V6.png)
P value = 0.445 (Fisher's exact test), Q value = 1
Table S376. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MYH9 MUTATED | 3 | 3 | 5 | 5 | 1 | 1 | 0 |
MYH9 WILD-TYPE | 176 | 132 | 210 | 151 | 224 | 47 | 15 |
P value = 0.605 (Fisher's exact test), Q value = 1
Table S377. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MYH9 MUTATED | 3 | 5 | 4 | 3 | 1 | 2 |
MYH9 WILD-TYPE | 165 | 217 | 184 | 169 | 170 | 50 |
P value = 0.757 (Fisher's exact test), Q value = 1
Table S378. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MYH9 MUTATED | 6 | 8 | 4 |
MYH9 WILD-TYPE | 264 | 405 | 270 |
P value = 0.91 (Fisher's exact test), Q value = 1
Table S379. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MYH9 MUTATED | 3 | 4 | 7 | 3 | 1 |
MYH9 WILD-TYPE | 149 | 170 | 383 | 122 | 115 |
P value = 0.64 (Fisher's exact test), Q value = 1
Table S380. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MYH9 MUTATED | 4 | 6 | 3 |
MYH9 WILD-TYPE | 244 | 211 | 184 |
P value = 0.275 (Fisher's exact test), Q value = 1
Table S381. Gene #32: 'MYH9 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MYH9 MUTATED | 2 | 0 | 3 | 1 | 4 | 3 |
MYH9 WILD-TYPE | 113 | 63 | 186 | 116 | 104 | 57 |
P value = 0.139 (Fisher's exact test), Q value = 1
Table S382. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HLA-C MUTATED | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
HLA-C WILD-TYPE | 21 | 37 | 114 | 97 | 108 | 72 | 19 | 38 |
P value = 0.85 (Fisher's exact test), Q value = 1
Table S383. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HLA-C MUTATED | 0 | 2 | 1 | 0 | 0 |
HLA-C WILD-TYPE | 96 | 150 | 115 | 89 | 56 |
P value = 0.775 (Fisher's exact test), Q value = 1
Table S384. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HLA-C MUTATED | 3 | 2 | 0 | 4 | 0 |
HLA-C WILD-TYPE | 364 | 224 | 91 | 237 | 37 |
P value = 0.275 (Fisher's exact test), Q value = 1
Table S385. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HLA-C MUTATED | 4 | 2 | 1 | 0 | 1 |
HLA-C WILD-TYPE | 112 | 179 | 156 | 83 | 110 |
P value = 0.398 (Fisher's exact test), Q value = 1
Table S386. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
HLA-C MUTATED | 1 | 0 | 2 |
HLA-C WILD-TYPE | 145 | 129 | 116 |
P value = 0.77 (Fisher's exact test), Q value = 1
Table S387. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
HLA-C MUTATED | 0 | 1 | 0 | 2 | 0 |
HLA-C WILD-TYPE | 59 | 108 | 90 | 102 | 31 |
P value = 0.336 (Fisher's exact test), Q value = 1
Table S388. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HLA-C MUTATED | 4 | 1 | 3 | 1 | 0 | 0 | 0 |
HLA-C WILD-TYPE | 175 | 134 | 212 | 155 | 225 | 48 | 15 |
P value = 0.38 (Fisher's exact test), Q value = 1
Table S389. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HLA-C MUTATED | 4 | 2 | 2 | 1 | 0 | 0 |
HLA-C WILD-TYPE | 164 | 220 | 186 | 171 | 171 | 52 |
P value = 0.234 (Fisher's exact test), Q value = 1
Table S390. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HLA-C MUTATED | 2 | 2 | 5 |
HLA-C WILD-TYPE | 268 | 411 | 269 |
P value = 0.00634 (Fisher's exact test), Q value = 1
Table S391. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HLA-C MUTATED | 1 | 3 | 0 | 4 | 1 |
HLA-C WILD-TYPE | 151 | 171 | 390 | 121 | 115 |
Figure S100. Get High-res Image Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D33V10.png)
P value = 0.141 (Fisher's exact test), Q value = 1
Table S392. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HLA-C MUTATED | 1 | 1 | 4 |
HLA-C WILD-TYPE | 247 | 216 | 183 |
P value = 0.112 (Fisher's exact test), Q value = 1
Table S393. Gene #33: 'HLA-C MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HLA-C MUTATED | 4 | 0 | 1 | 0 | 1 | 0 |
HLA-C WILD-TYPE | 111 | 63 | 188 | 117 | 107 | 60 |
P value = 0.405 (Fisher's exact test), Q value = 1
Table S394. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RAB42 MUTATED | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 |
RAB42 WILD-TYPE | 21 | 38 | 114 | 94 | 107 | 73 | 19 | 39 |
P value = 0.0698 (Fisher's exact test), Q value = 1
Table S395. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RAB42 MUTATED | 0 | 1 | 0 | 3 | 0 |
RAB42 WILD-TYPE | 96 | 151 | 116 | 86 | 56 |
P value = 0.372 (Fisher's exact test), Q value = 1
Table S396. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RAB42 MUTATED | 1 | 0 | 0 | 3 | 0 |
RAB42 WILD-TYPE | 366 | 226 | 91 | 238 | 37 |
P value = 0.4 (Fisher's exact test), Q value = 1
Table S397. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RAB42 MUTATED | 1 | 0 | 2 |
RAB42 WILD-TYPE | 145 | 129 | 116 |
P value = 0.496 (Fisher's exact test), Q value = 1
Table S398. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RAB42 MUTATED | 0 | 1 | 2 | 0 | 0 |
RAB42 WILD-TYPE | 59 | 108 | 88 | 104 | 31 |
P value = 0.196 (Fisher's exact test), Q value = 1
Table S399. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RAB42 MUTATED | 3 | 0 | 1 | 0 | 0 | 0 | 0 |
RAB42 WILD-TYPE | 176 | 135 | 214 | 156 | 225 | 48 | 15 |
P value = 0.126 (Fisher's exact test), Q value = 1
Table S400. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RAB42 MUTATED | 3 | 1 | 0 | 0 | 0 | 0 |
RAB42 WILD-TYPE | 165 | 221 | 188 | 172 | 171 | 52 |
P value = 0.218 (Fisher's exact test), Q value = 1
Table S401. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RAB42 MUTATED | 0 | 1 | 3 |
RAB42 WILD-TYPE | 270 | 412 | 271 |
P value = 0.0108 (Fisher's exact test), Q value = 1
Table S402. Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RAB42 MUTATED | 0 | 1 | 0 | 3 | 0 |
RAB42 WILD-TYPE | 152 | 173 | 390 | 122 | 116 |
Figure S101. Get High-res Image Gene #34: 'RAB42 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D34V10.png)
P value = 0.915 (Fisher's exact test), Q value = 1
Table S403. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FGFR2 MUTATED | 0 | 0 | 1 | 1 | 2 | 2 | 0 | 0 |
FGFR2 WILD-TYPE | 21 | 38 | 113 | 96 | 106 | 71 | 19 | 39 |
P value = 0.878 (Fisher's exact test), Q value = 1
Table S404. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FGFR2 MUTATED | 1 | 1 | 2 | 1 | 1 |
FGFR2 WILD-TYPE | 95 | 151 | 114 | 88 | 55 |
P value = 0.354 (Fisher's exact test), Q value = 1
Table S405. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FGFR2 MUTATED | 3 | 3 | 3 | 2 | 0 |
FGFR2 WILD-TYPE | 364 | 223 | 88 | 239 | 37 |
P value = 0.37 (Fisher's exact test), Q value = 1
Table S406. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
FGFR2 MUTATED | 0 | 1 | 3 | 1 | 0 |
FGFR2 WILD-TYPE | 116 | 180 | 154 | 82 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S407. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
FGFR2 MUTATED | 2 | 2 | 1 |
FGFR2 WILD-TYPE | 144 | 127 | 117 |
P value = 0.917 (Fisher's exact test), Q value = 1
Table S408. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
FGFR2 MUTATED | 0 | 2 | 1 | 2 | 0 |
FGFR2 WILD-TYPE | 59 | 107 | 89 | 102 | 31 |
P value = 0.277 (Fisher's exact test), Q value = 1
Table S409. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FGFR2 MUTATED | 1 | 0 | 3 | 3 | 3 | 0 | 1 |
FGFR2 WILD-TYPE | 178 | 135 | 212 | 153 | 222 | 48 | 14 |
P value = 0.0731 (Fisher's exact test), Q value = 1
Table S410. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FGFR2 MUTATED | 1 | 1 | 1 | 6 | 1 | 1 |
FGFR2 WILD-TYPE | 167 | 221 | 187 | 166 | 170 | 51 |
P value = 0.545 (Fisher's exact test), Q value = 1
Table S411. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FGFR2 MUTATED | 2 | 4 | 5 |
FGFR2 WILD-TYPE | 268 | 409 | 269 |
P value = 0.6 (Fisher's exact test), Q value = 1
Table S412. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FGFR2 MUTATED | 0 | 3 | 6 | 1 | 1 |
FGFR2 WILD-TYPE | 152 | 171 | 384 | 124 | 115 |
P value = 0.245 (Fisher's exact test), Q value = 1
Table S413. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
FGFR2 MUTATED | 1 | 2 | 4 |
FGFR2 WILD-TYPE | 247 | 215 | 183 |
P value = 0.66 (Fisher's exact test), Q value = 1
Table S414. Gene #35: 'FGFR2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
FGFR2 MUTATED | 0 | 0 | 3 | 1 | 2 | 1 |
FGFR2 WILD-TYPE | 115 | 63 | 186 | 116 | 106 | 59 |
P value = 0.778 (Fisher's exact test), Q value = 1
Table S415. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ERBB2 MUTATED | 1 | 1 | 2 | 1 | 3 | 3 | 0 | 1 |
ERBB2 WILD-TYPE | 20 | 37 | 112 | 96 | 105 | 70 | 19 | 38 |
P value = 0.572 (Fisher's exact test), Q value = 1
Table S416. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ERBB2 MUTATED | 2 | 6 | 3 | 1 | 0 |
ERBB2 WILD-TYPE | 94 | 146 | 113 | 88 | 56 |
P value = 0.0408 (Fisher's exact test), Q value = 1
Table S417. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ERBB2 MUTATED | 11 | 2 | 5 | 2 | 0 |
ERBB2 WILD-TYPE | 356 | 224 | 86 | 239 | 37 |
Figure S102. Get High-res Image Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D36V3.png)
P value = 0.0577 (Fisher's exact test), Q value = 1
Table S418. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ERBB2 MUTATED | 0 | 1 | 4 | 3 | 4 |
ERBB2 WILD-TYPE | 116 | 180 | 153 | 80 | 107 |
P value = 0.551 (Fisher's exact test), Q value = 1
Table S419. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ERBB2 MUTATED | 2 | 2 | 4 |
ERBB2 WILD-TYPE | 144 | 127 | 114 |
P value = 0.882 (Fisher's exact test), Q value = 1
Table S420. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ERBB2 MUTATED | 1 | 2 | 1 | 3 | 1 |
ERBB2 WILD-TYPE | 58 | 107 | 89 | 101 | 30 |
P value = 0.0879 (Fisher's exact test), Q value = 1
Table S421. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ERBB2 MUTATED | 1 | 5 | 4 | 8 | 3 | 0 | 0 |
ERBB2 WILD-TYPE | 178 | 130 | 211 | 148 | 222 | 48 | 15 |
P value = 0.148 (Fisher's exact test), Q value = 1
Table S422. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ERBB2 MUTATED | 1 | 7 | 2 | 5 | 3 | 3 |
ERBB2 WILD-TYPE | 167 | 215 | 186 | 167 | 168 | 49 |
P value = 0.00189 (Fisher's exact test), Q value = 1
Table S423. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ERBB2 MUTATED | 10 | 10 | 0 |
ERBB2 WILD-TYPE | 260 | 403 | 274 |
Figure S103. Get High-res Image Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D36V9.png)
P value = 0.332 (Fisher's exact test), Q value = 1
Table S424. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ERBB2 MUTATED | 5 | 4 | 8 | 0 | 3 |
ERBB2 WILD-TYPE | 147 | 170 | 382 | 125 | 113 |
P value = 0.232 (Fisher's exact test), Q value = 1
Table S425. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ERBB2 MUTATED | 5 | 6 | 1 |
ERBB2 WILD-TYPE | 243 | 211 | 186 |
P value = 0.123 (Fisher's exact test), Q value = 1
Table S426. Gene #36: 'ERBB2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ERBB2 MUTATED | 0 | 2 | 3 | 1 | 3 | 3 |
ERBB2 WILD-TYPE | 115 | 61 | 186 | 116 | 105 | 57 |
P value = 0.0588 (Fisher's exact test), Q value = 1
Table S427. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CTCF MUTATED | 1 | 0 | 2 | 1 | 8 | 0 | 0 | 1 |
CTCF WILD-TYPE | 20 | 38 | 112 | 96 | 100 | 73 | 19 | 38 |
P value = 0.0434 (Fisher's exact test), Q value = 1
Table S428. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CTCF MUTATED | 3 | 3 | 1 | 1 | 5 |
CTCF WILD-TYPE | 93 | 149 | 115 | 88 | 51 |
Figure S104. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D37V2.png)
P value = 0.00385 (Fisher's exact test), Q value = 1
Table S429. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CTCF MUTATED | 14 | 1 | 0 | 1 | 1 |
CTCF WILD-TYPE | 353 | 225 | 91 | 240 | 36 |
Figure S105. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D37V3.png)
P value = 0.0326 (Fisher's exact test), Q value = 1
Table S430. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CTCF MUTATED | 0 | 8 | 1 | 1 | 1 |
CTCF WILD-TYPE | 116 | 173 | 156 | 82 | 110 |
Figure S106. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D37V4.png)
P value = 0.0631 (Fisher's exact test), Q value = 1
Table S431. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CTCF MUTATED | 1 | 7 | 3 |
CTCF WILD-TYPE | 145 | 122 | 115 |
P value = 0.126 (Fisher's exact test), Q value = 1
Table S432. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CTCF MUTATED | 5 | 3 | 1 | 2 | 0 |
CTCF WILD-TYPE | 54 | 106 | 89 | 102 | 31 |
P value = 0.0228 (Fisher's exact test), Q value = 1
Table S433. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CTCF MUTATED | 1 | 3 | 10 | 1 | 1 | 1 | 0 |
CTCF WILD-TYPE | 178 | 132 | 205 | 155 | 224 | 47 | 15 |
Figure S107. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D37V7.png)
P value = 0.1 (Fisher's exact test), Q value = 1
Table S434. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CTCF MUTATED | 1 | 3 | 8 | 1 | 4 | 0 |
CTCF WILD-TYPE | 167 | 219 | 180 | 171 | 167 | 52 |
P value = 0.0355 (Fisher's exact test), Q value = 1
Table S435. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CTCF MUTATED | 4 | 12 | 1 |
CTCF WILD-TYPE | 266 | 401 | 273 |
Figure S108. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D37V9.png)
P value = 0.0118 (Fisher's exact test), Q value = 1
Table S436. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CTCF MUTATED | 2 | 9 | 5 | 0 | 1 |
CTCF WILD-TYPE | 150 | 165 | 385 | 125 | 115 |
Figure S109. Get High-res Image Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D37V10.png)
P value = 0.226 (Fisher's exact test), Q value = 1
Table S437. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CTCF MUTATED | 6 | 1 | 2 |
CTCF WILD-TYPE | 242 | 216 | 185 |
P value = 0.215 (Fisher's exact test), Q value = 1
Table S438. Gene #37: 'CTCF MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CTCF MUTATED | 1 | 0 | 2 | 5 | 1 | 0 |
CTCF WILD-TYPE | 114 | 63 | 187 | 112 | 107 | 60 |
P value = 0.497 (Fisher's exact test), Q value = 1
Table S439. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZMYM3 MUTATED | 1 | 0 | 1 | 4 | 4 | 1 | 0 | 0 |
ZMYM3 WILD-TYPE | 20 | 38 | 113 | 93 | 104 | 72 | 19 | 39 |
P value = 0.441 (Fisher's exact test), Q value = 1
Table S440. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZMYM3 MUTATED | 1 | 4 | 1 | 4 | 1 |
ZMYM3 WILD-TYPE | 95 | 148 | 115 | 85 | 55 |
P value = 0.915 (Fisher's exact test), Q value = 1
Table S441. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZMYM3 MUTATED | 7 | 2 | 1 | 4 | 0 |
ZMYM3 WILD-TYPE | 360 | 224 | 90 | 237 | 37 |
P value = 0.447 (Fisher's exact test), Q value = 1
Table S442. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZMYM3 MUTATED | 3 | 1 | 1 | 0 | 1 |
ZMYM3 WILD-TYPE | 113 | 180 | 156 | 83 | 110 |
P value = 0.128 (Fisher's exact test), Q value = 1
Table S443. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ZMYM3 MUTATED | 5 | 2 | 0 |
ZMYM3 WILD-TYPE | 141 | 127 | 118 |
P value = 0.284 (Fisher's exact test), Q value = 1
Table S444. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ZMYM3 MUTATED | 1 | 0 | 3 | 2 | 1 |
ZMYM3 WILD-TYPE | 58 | 109 | 87 | 102 | 30 |
P value = 0.509 (Fisher's exact test), Q value = 1
Table S445. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZMYM3 MUTATED | 4 | 0 | 5 | 1 | 4 | 0 | 0 |
ZMYM3 WILD-TYPE | 175 | 135 | 210 | 155 | 221 | 48 | 15 |
P value = 0.344 (Fisher's exact test), Q value = 1
Table S446. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZMYM3 MUTATED | 4 | 1 | 4 | 4 | 1 | 0 |
ZMYM3 WILD-TYPE | 164 | 221 | 184 | 168 | 170 | 52 |
P value = 0.584 (Fisher's exact test), Q value = 1
Table S447. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZMYM3 MUTATED | 2 | 7 | 5 |
ZMYM3 WILD-TYPE | 268 | 406 | 269 |
P value = 1 (Fisher's exact test), Q value = 1
Table S448. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZMYM3 MUTATED | 2 | 2 | 6 | 2 | 2 |
ZMYM3 WILD-TYPE | 150 | 172 | 384 | 123 | 114 |
P value = 1 (Fisher's exact test), Q value = 1
Table S449. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZMYM3 MUTATED | 3 | 2 | 2 |
ZMYM3 WILD-TYPE | 245 | 215 | 185 |
P value = 0.903 (Fisher's exact test), Q value = 1
Table S450. Gene #38: 'ZMYM3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZMYM3 MUTATED | 1 | 0 | 3 | 1 | 2 | 0 |
ZMYM3 WILD-TYPE | 114 | 63 | 186 | 116 | 106 | 60 |
P value = 0.821 (Fisher's exact test), Q value = 1
Table S451. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FRMPD2 MUTATED | 0 | 1 | 1 | 1 | 1 | 2 | 0 | 0 |
FRMPD2 WILD-TYPE | 21 | 37 | 113 | 96 | 107 | 71 | 19 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S452. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FRMPD2 MUTATED | 1 | 2 | 2 | 1 | 0 |
FRMPD2 WILD-TYPE | 95 | 150 | 114 | 88 | 56 |
P value = 0.6 (Fisher's exact test), Q value = 1
Table S453. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FRMPD2 MUTATED | 4 | 3 | 0 | 4 | 1 |
FRMPD2 WILD-TYPE | 363 | 223 | 91 | 237 | 36 |
P value = 0.0963 (Fisher's exact test), Q value = 1
Table S454. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
FRMPD2 MUTATED | 4 | 0 | 3 | 1 | 1 |
FRMPD2 WILD-TYPE | 112 | 181 | 154 | 82 | 110 |
P value = 0.467 (Fisher's exact test), Q value = 1
Table S455. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
FRMPD2 MUTATED | 2 | 0 | 2 |
FRMPD2 WILD-TYPE | 144 | 129 | 116 |
P value = 0.883 (Fisher's exact test), Q value = 1
Table S456. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
FRMPD2 MUTATED | 0 | 1 | 1 | 2 | 0 |
FRMPD2 WILD-TYPE | 59 | 108 | 89 | 102 | 31 |
P value = 0.538 (Fisher's exact test), Q value = 1
Table S457. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FRMPD2 MUTATED | 4 | 1 | 2 | 3 | 1 | 1 | 0 |
FRMPD2 WILD-TYPE | 175 | 134 | 213 | 153 | 224 | 47 | 15 |
P value = 0.0378 (Fisher's exact test), Q value = 1
Table S458. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FRMPD2 MUTATED | 4 | 3 | 0 | 5 | 0 | 0 |
FRMPD2 WILD-TYPE | 164 | 219 | 188 | 167 | 171 | 52 |
Figure S110. Get High-res Image Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D39V8.png)
P value = 0.936 (Fisher's exact test), Q value = 1
Table S459. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FRMPD2 MUTATED | 3 | 5 | 4 |
FRMPD2 WILD-TYPE | 267 | 408 | 270 |
P value = 0.746 (Fisher's exact test), Q value = 1
Table S460. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FRMPD2 MUTATED | 2 | 1 | 5 | 3 | 1 |
FRMPD2 WILD-TYPE | 150 | 173 | 385 | 122 | 115 |
P value = 0.395 (Fisher's exact test), Q value = 1
Table S461. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
FRMPD2 MUTATED | 1 | 2 | 3 |
FRMPD2 WILD-TYPE | 247 | 215 | 184 |
P value = 0.257 (Fisher's exact test), Q value = 1
Table S462. Gene #39: 'FRMPD2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
FRMPD2 MUTATED | 3 | 0 | 1 | 0 | 2 | 0 |
FRMPD2 WILD-TYPE | 112 | 63 | 188 | 117 | 106 | 60 |
P value = 0.677 (Fisher's exact test), Q value = 1
Table S463. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TFE3 MUTATED | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 0 |
TFE3 WILD-TYPE | 20 | 37 | 113 | 95 | 107 | 72 | 19 | 39 |
P value = 0.902 (Fisher's exact test), Q value = 1
Table S464. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TFE3 MUTATED | 1 | 2 | 2 | 2 | 0 |
TFE3 WILD-TYPE | 95 | 150 | 114 | 87 | 56 |
P value = 0.673 (Fisher's exact test), Q value = 1
Table S465. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TFE3 MUTATED | 2 | 1 | 1 | 3 | 0 |
TFE3 WILD-TYPE | 365 | 225 | 90 | 238 | 37 |
P value = 0.643 (Fisher's exact test), Q value = 1
Table S466. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TFE3 MUTATED | 1 | 1 | 0 | 1 | 1 |
TFE3 WILD-TYPE | 115 | 180 | 157 | 82 | 110 |
P value = 1 (Fisher's exact test), Q value = 1
Table S467. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TFE3 MUTATED | 1 | 1 | 1 |
TFE3 WILD-TYPE | 145 | 128 | 117 |
P value = 0.548 (Fisher's exact test), Q value = 1
Table S468. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TFE3 MUTATED | 0 | 0 | 1 | 2 | 0 |
TFE3 WILD-TYPE | 59 | 109 | 89 | 102 | 31 |
P value = 0.626 (Fisher's exact test), Q value = 1
Table S469. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TFE3 MUTATED | 2 | 2 | 0 | 1 | 2 | 0 | 0 |
TFE3 WILD-TYPE | 177 | 133 | 215 | 155 | 223 | 48 | 15 |
P value = 0.404 (Fisher's exact test), Q value = 1
Table S470. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TFE3 MUTATED | 2 | 1 | 0 | 1 | 2 | 1 |
TFE3 WILD-TYPE | 166 | 221 | 188 | 171 | 169 | 51 |
P value = 0.5 (Fisher's exact test), Q value = 1
Table S471. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TFE3 MUTATED | 3 | 2 | 2 |
TFE3 WILD-TYPE | 267 | 411 | 272 |
P value = 0.0238 (Fisher's exact test), Q value = 1
Table S472. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TFE3 MUTATED | 1 | 2 | 0 | 1 | 3 |
TFE3 WILD-TYPE | 151 | 172 | 390 | 124 | 113 |
Figure S111. Get High-res Image Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D40V10.png)
P value = 0.512 (Fisher's exact test), Q value = 1
Table S473. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TFE3 MUTATED | 2 | 0 | 1 |
TFE3 WILD-TYPE | 246 | 217 | 186 |
P value = 0.649 (Fisher's exact test), Q value = 1
Table S474. Gene #40: 'TFE3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TFE3 MUTATED | 1 | 1 | 1 | 0 | 0 | 0 |
TFE3 WILD-TYPE | 114 | 62 | 188 | 117 | 108 | 60 |
P value = 0.0137 (Fisher's exact test), Q value = 1
Table S475. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GPS2 MUTATED | 0 | 4 | 2 | 0 | 1 | 0 | 0 | 1 |
GPS2 WILD-TYPE | 21 | 34 | 112 | 97 | 107 | 73 | 19 | 38 |
Figure S112. Get High-res Image Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D41V1.png)
P value = 0.0478 (Fisher's exact test), Q value = 1
Table S476. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GPS2 MUTATED | 2 | 6 | 0 | 0 | 0 |
GPS2 WILD-TYPE | 94 | 146 | 116 | 89 | 56 |
Figure S113. Get High-res Image Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D41V2.png)
P value = 0.0603 (Fisher's exact test), Q value = 1
Table S477. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GPS2 MUTATED | 9 | 2 | 0 | 0 | 0 |
GPS2 WILD-TYPE | 358 | 224 | 91 | 241 | 37 |
P value = 0.342 (Fisher's exact test), Q value = 1
Table S478. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
GPS2 MUTATED | 2 | 1 | 4 | 1 | 0 |
GPS2 WILD-TYPE | 114 | 180 | 153 | 82 | 111 |
P value = 0.265 (Fisher's exact test), Q value = 1
Table S479. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GPS2 MUTATED | 0 | 2 | 2 |
GPS2 WILD-TYPE | 146 | 127 | 116 |
P value = 0.746 (Fisher's exact test), Q value = 1
Table S480. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GPS2 MUTATED | 1 | 1 | 0 | 2 | 0 |
GPS2 WILD-TYPE | 58 | 108 | 90 | 102 | 31 |
P value = 0.159 (Fisher's exact test), Q value = 1
Table S481. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GPS2 MUTATED | 0 | 2 | 1 | 3 | 3 | 2 | 0 |
GPS2 WILD-TYPE | 179 | 133 | 214 | 153 | 222 | 46 | 15 |
P value = 0.0952 (Fisher's exact test), Q value = 1
Table S482. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GPS2 MUTATED | 0 | 5 | 1 | 1 | 2 | 2 |
GPS2 WILD-TYPE | 168 | 217 | 187 | 171 | 169 | 50 |
P value = 0.405 (Fisher's exact test), Q value = 1
Table S483. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GPS2 MUTATED | 5 | 3 | 3 |
GPS2 WILD-TYPE | 265 | 410 | 271 |
P value = 0.633 (Fisher's exact test), Q value = 1
Table S484. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GPS2 MUTATED | 2 | 3 | 4 | 0 | 2 |
GPS2 WILD-TYPE | 150 | 171 | 386 | 125 | 114 |
P value = 1 (Fisher's exact test), Q value = 1
Table S485. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
GPS2 MUTATED | 2 | 2 | 1 |
GPS2 WILD-TYPE | 246 | 215 | 186 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S486. Gene #41: 'GPS2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
GPS2 MUTATED | 0 | 0 | 2 | 0 | 1 | 2 |
GPS2 WILD-TYPE | 115 | 63 | 187 | 117 | 107 | 58 |
P value = 0.667 (Fisher's exact test), Q value = 1
Table S487. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
DOCK11 MUTATED | 0 | 0 | 3 | 4 | 1 | 3 | 0 | 0 |
DOCK11 WILD-TYPE | 21 | 38 | 111 | 93 | 107 | 70 | 19 | 39 |
P value = 0.448 (Fisher's exact test), Q value = 1
Table S488. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
DOCK11 MUTATED | 2 | 2 | 5 | 2 | 0 |
DOCK11 WILD-TYPE | 94 | 150 | 111 | 87 | 56 |
P value = 0.276 (Fisher's exact test), Q value = 1
Table S489. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
DOCK11 MUTATED | 8 | 2 | 1 | 9 | 0 |
DOCK11 WILD-TYPE | 359 | 224 | 90 | 232 | 37 |
P value = 0.426 (Fisher's exact test), Q value = 1
Table S490. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
DOCK11 MUTATED | 2 | 2 | 5 | 0 | 3 |
DOCK11 WILD-TYPE | 114 | 179 | 152 | 83 | 108 |
P value = 0.363 (Fisher's exact test), Q value = 1
Table S491. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
DOCK11 MUTATED | 5 | 2 | 1 |
DOCK11 WILD-TYPE | 141 | 127 | 117 |
P value = 0.0652 (Fisher's exact test), Q value = 1
Table S492. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
DOCK11 MUTATED | 0 | 0 | 4 | 4 | 0 |
DOCK11 WILD-TYPE | 59 | 109 | 86 | 100 | 31 |
P value = 0.26 (Fisher's exact test), Q value = 1
Table S493. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
DOCK11 MUTATED | 5 | 1 | 2 | 7 | 5 | 0 | 0 |
DOCK11 WILD-TYPE | 174 | 134 | 213 | 149 | 220 | 48 | 15 |
P value = 0.0176 (Fisher's exact test), Q value = 1
Table S494. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
DOCK11 MUTATED | 4 | 2 | 1 | 8 | 2 | 3 |
DOCK11 WILD-TYPE | 164 | 220 | 187 | 164 | 169 | 49 |
Figure S114. Get High-res Image Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D42V8.png)
P value = 0.504 (Fisher's exact test), Q value = 1
Table S495. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
DOCK11 MUTATED | 4 | 8 | 8 |
DOCK11 WILD-TYPE | 266 | 405 | 266 |
P value = 0.016 (Fisher's exact test), Q value = 1
Table S496. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
DOCK11 MUTATED | 1 | 1 | 10 | 1 | 7 |
DOCK11 WILD-TYPE | 151 | 173 | 380 | 124 | 109 |
Figure S115. Get High-res Image Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D42V10.png)
P value = 0.0407 (Fisher's exact test), Q value = 1
Table S497. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
DOCK11 MUTATED | 2 | 3 | 8 |
DOCK11 WILD-TYPE | 246 | 214 | 179 |
Figure S116. Get High-res Image Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D42V11.png)
P value = 0.167 (Fisher's exact test), Q value = 1
Table S498. Gene #42: 'DOCK11 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
DOCK11 MUTATED | 3 | 0 | 3 | 1 | 2 | 4 |
DOCK11 WILD-TYPE | 112 | 63 | 186 | 116 | 106 | 56 |
P value = 0.988 (Fisher's exact test), Q value = 1
Table S499. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HRNR MUTATED | 0 | 1 | 5 | 5 | 4 | 4 | 0 | 1 |
HRNR WILD-TYPE | 21 | 37 | 109 | 92 | 104 | 69 | 19 | 38 |
P value = 0.782 (Fisher's exact test), Q value = 1
Table S500. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HRNR MUTATED | 2 | 7 | 4 | 5 | 2 |
HRNR WILD-TYPE | 94 | 145 | 112 | 84 | 54 |
P value = 0.143 (Fisher's exact test), Q value = 1
Table S501. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HRNR MUTATED | 13 | 3 | 4 | 8 | 3 |
HRNR WILD-TYPE | 354 | 223 | 87 | 233 | 34 |
P value = 0.747 (Fisher's exact test), Q value = 1
Table S502. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HRNR MUTATED | 4 | 6 | 3 | 4 | 3 |
HRNR WILD-TYPE | 112 | 175 | 154 | 79 | 108 |
P value = 0.592 (Fisher's exact test), Q value = 1
Table S503. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
HRNR MUTATED | 4 | 6 | 6 |
HRNR WILD-TYPE | 142 | 123 | 112 |
P value = 0.72 (Fisher's exact test), Q value = 1
Table S504. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
HRNR MUTATED | 2 | 3 | 3 | 6 | 2 |
HRNR WILD-TYPE | 57 | 106 | 87 | 98 | 29 |
P value = 0.987 (Fisher's exact test), Q value = 1
Table S505. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HRNR MUTATED | 7 | 4 | 7 | 6 | 6 | 1 | 0 |
HRNR WILD-TYPE | 172 | 131 | 208 | 150 | 219 | 47 | 15 |
P value = 0.702 (Fisher's exact test), Q value = 1
Table S506. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HRNR MUTATED | 7 | 8 | 5 | 4 | 4 | 3 |
HRNR WILD-TYPE | 161 | 214 | 183 | 168 | 167 | 49 |
P value = 0.484 (Fisher's exact test), Q value = 1
Table S507. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HRNR MUTATED | 6 | 13 | 11 |
HRNR WILD-TYPE | 264 | 400 | 263 |
P value = 0.217 (Fisher's exact test), Q value = 1
Table S508. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HRNR MUTATED | 3 | 9 | 10 | 2 | 6 |
HRNR WILD-TYPE | 149 | 165 | 380 | 123 | 110 |
P value = 0.908 (Fisher's exact test), Q value = 1
Table S509. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HRNR MUTATED | 7 | 6 | 4 |
HRNR WILD-TYPE | 241 | 211 | 183 |
P value = 0.52 (Fisher's exact test), Q value = 1
Table S510. Gene #43: 'HRNR MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HRNR MUTATED | 4 | 0 | 4 | 4 | 2 | 3 |
HRNR WILD-TYPE | 111 | 63 | 185 | 113 | 106 | 57 |
P value = 0.937 (Fisher's exact test), Q value = 1
Table S511. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CASZ1 MUTATED | 0 | 1 | 1 | 2 | 2 | 1 | 0 | 0 |
CASZ1 WILD-TYPE | 21 | 37 | 113 | 95 | 106 | 72 | 19 | 39 |
P value = 0.855 (Fisher's exact test), Q value = 1
Table S512. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CASZ1 MUTATED | 1 | 3 | 1 | 2 | 0 |
CASZ1 WILD-TYPE | 95 | 149 | 115 | 87 | 56 |
P value = 0.971 (Fisher's exact test), Q value = 1
Table S513. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CASZ1 MUTATED | 5 | 4 | 1 | 3 | 0 |
CASZ1 WILD-TYPE | 362 | 222 | 90 | 238 | 37 |
P value = 0.529 (Fisher's exact test), Q value = 1
Table S514. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CASZ1 MUTATED | 3 | 2 | 4 | 0 | 1 |
CASZ1 WILD-TYPE | 113 | 179 | 153 | 83 | 110 |
P value = 0.111 (Fisher's exact test), Q value = 1
Table S515. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CASZ1 MUTATED | 1 | 0 | 3 |
CASZ1 WILD-TYPE | 145 | 129 | 115 |
P value = 0.938 (Fisher's exact test), Q value = 1
Table S516. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CASZ1 MUTATED | 0 | 2 | 1 | 1 | 0 |
CASZ1 WILD-TYPE | 59 | 107 | 89 | 103 | 31 |
P value = 0.98 (Fisher's exact test), Q value = 1
Table S517. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CASZ1 MUTATED | 4 | 2 | 3 | 2 | 3 | 0 | 0 |
CASZ1 WILD-TYPE | 175 | 133 | 212 | 154 | 222 | 48 | 15 |
P value = 0.699 (Fisher's exact test), Q value = 1
Table S518. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CASZ1 MUTATED | 4 | 2 | 2 | 4 | 2 | 0 |
CASZ1 WILD-TYPE | 164 | 220 | 186 | 168 | 169 | 52 |
P value = 0.941 (Fisher's exact test), Q value = 1
Table S519. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CASZ1 MUTATED | 4 | 6 | 3 |
CASZ1 WILD-TYPE | 266 | 407 | 271 |
P value = 0.863 (Fisher's exact test), Q value = 1
Table S520. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CASZ1 MUTATED | 2 | 2 | 5 | 3 | 1 |
CASZ1 WILD-TYPE | 150 | 172 | 385 | 122 | 115 |
P value = 0.92 (Fisher's exact test), Q value = 1
Table S521. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CASZ1 MUTATED | 4 | 3 | 2 |
CASZ1 WILD-TYPE | 244 | 214 | 185 |
P value = 0.958 (Fisher's exact test), Q value = 1
Table S522. Gene #44: 'CASZ1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CASZ1 MUTATED | 2 | 1 | 3 | 1 | 2 | 0 |
CASZ1 WILD-TYPE | 113 | 62 | 186 | 116 | 106 | 60 |
P value = 0.52 (Fisher's exact test), Q value = 1
Table S523. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CDC42EP1 MUTATED | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 |
CDC42EP1 WILD-TYPE | 21 | 38 | 113 | 95 | 108 | 73 | 19 | 38 |
P value = 0.463 (Fisher's exact test), Q value = 1
Table S524. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CDC42EP1 MUTATED | 1 | 1 | 0 | 2 | 0 |
CDC42EP1 WILD-TYPE | 95 | 151 | 116 | 87 | 56 |
P value = 0.513 (Fisher's exact test), Q value = 1
Table S525. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CDC42EP1 MUTATED | 2 | 0 | 1 | 2 | 0 |
CDC42EP1 WILD-TYPE | 365 | 226 | 90 | 239 | 37 |
P value = 0.259 (Fisher's exact test), Q value = 1
Table S526. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CDC42EP1 MUTATED | 0 | 1 | 0 | 0 | 2 |
CDC42EP1 WILD-TYPE | 116 | 180 | 157 | 83 | 109 |
P value = 1 (Fisher's exact test), Q value = 1
Table S527. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CDC42EP1 MUTATED | 2 | 1 | 1 |
CDC42EP1 WILD-TYPE | 144 | 128 | 117 |
P value = 0.584 (Fisher's exact test), Q value = 1
Table S528. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CDC42EP1 MUTATED | 1 | 1 | 2 | 0 | 0 |
CDC42EP1 WILD-TYPE | 58 | 108 | 88 | 104 | 31 |
P value = 0.254 (Fisher's exact test), Q value = 1
Table S529. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CDC42EP1 MUTATED | 2 | 1 | 0 | 0 | 1 | 1 | 0 |
CDC42EP1 WILD-TYPE | 177 | 134 | 215 | 156 | 224 | 47 | 15 |
P value = 0.555 (Fisher's exact test), Q value = 1
Table S530. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CDC42EP1 MUTATED | 2 | 2 | 0 | 0 | 1 | 0 |
CDC42EP1 WILD-TYPE | 166 | 220 | 188 | 172 | 170 | 52 |
P value = 0.612 (Fisher's exact test), Q value = 1
Table S531. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CDC42EP1 MUTATED | 2 | 1 | 2 |
CDC42EP1 WILD-TYPE | 268 | 412 | 272 |
P value = 0.0843 (Fisher's exact test), Q value = 1
Table S532. Gene #45: 'CDC42EP1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CDC42EP1 MUTATED | 1 | 1 | 0 | 1 | 2 |
CDC42EP1 WILD-TYPE | 151 | 173 | 390 | 124 | 114 |
P value = 0.647 (Fisher's exact test), Q value = 1
Table S533. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
C1QTNF5 MUTATED | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 |
C1QTNF5 WILD-TYPE | 21 | 38 | 112 | 97 | 108 | 72 | 19 | 39 |
P value = 0.199 (Fisher's exact test), Q value = 1
Table S534. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
C1QTNF5 MUTATED | 2 | 0 | 1 | 0 | 0 |
C1QTNF5 WILD-TYPE | 94 | 152 | 115 | 89 | 56 |
P value = 0.508 (Fisher's exact test), Q value = 1
Table S535. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
C1QTNF5 MUTATED | 2 | 1 | 2 | 2 | 0 |
C1QTNF5 WILD-TYPE | 365 | 225 | 89 | 239 | 37 |
P value = 0.645 (Fisher's exact test), Q value = 1
Table S536. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
C1QTNF5 MUTATED | 2 | 0 | 1 |
C1QTNF5 WILD-TYPE | 144 | 129 | 117 |
P value = 0.711 (Fisher's exact test), Q value = 1
Table S537. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
C1QTNF5 MUTATED | 1 | 1 | 1 | 0 | 0 |
C1QTNF5 WILD-TYPE | 58 | 108 | 89 | 104 | 31 |
P value = 0.529 (Fisher's exact test), Q value = 1
Table S538. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
C1QTNF5 MUTATED | 0 | 1 | 1 | 3 | 2 | 0 | 0 |
C1QTNF5 WILD-TYPE | 179 | 134 | 214 | 153 | 223 | 48 | 15 |
P value = 0.285 (Fisher's exact test), Q value = 1
Table S539. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
C1QTNF5 MUTATED | 0 | 2 | 0 | 2 | 2 | 1 |
C1QTNF5 WILD-TYPE | 168 | 220 | 188 | 170 | 169 | 51 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S540. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
C1QTNF5 MUTATED | 3 | 1 | 3 |
C1QTNF5 WILD-TYPE | 267 | 412 | 271 |
P value = 0.00993 (Fisher's exact test), Q value = 1
Table S541. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
C1QTNF5 MUTATED | 1 | 4 | 0 | 0 | 2 |
C1QTNF5 WILD-TYPE | 151 | 170 | 390 | 125 | 114 |
Figure S117. Get High-res Image Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D46V10.png)
P value = 0.261 (Fisher's exact test), Q value = 1
Table S542. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
C1QTNF5 MUTATED | 1 | 3 | 0 |
C1QTNF5 WILD-TYPE | 247 | 214 | 187 |
P value = 0.124 (Fisher's exact test), Q value = 1
Table S543. Gene #46: 'C1QTNF5 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
C1QTNF5 MUTATED | 0 | 0 | 1 | 0 | 3 | 0 |
C1QTNF5 WILD-TYPE | 115 | 63 | 188 | 117 | 105 | 60 |
P value = 0.634 (Fisher's exact test), Q value = 1
Table S544. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TGS1 MUTATED | 1 | 0 | 1 | 1 | 1 | 2 | 0 | 0 |
TGS1 WILD-TYPE | 20 | 38 | 113 | 96 | 107 | 71 | 19 | 39 |
P value = 0.666 (Fisher's exact test), Q value = 1
Table S545. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TGS1 MUTATED | 1 | 1 | 3 | 1 | 0 |
TGS1 WILD-TYPE | 95 | 151 | 113 | 88 | 56 |
P value = 0.443 (Fisher's exact test), Q value = 1
Table S546. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TGS1 MUTATED | 7 | 2 | 0 | 2 | 1 |
TGS1 WILD-TYPE | 360 | 224 | 91 | 239 | 36 |
P value = 0.248 (Fisher's exact test), Q value = 1
Table S547. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TGS1 MUTATED | 0 | 4 | 4 | 0 | 3 |
TGS1 WILD-TYPE | 116 | 177 | 153 | 83 | 108 |
P value = 0.114 (Fisher's exact test), Q value = 1
Table S548. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TGS1 MUTATED | 1 | 0 | 3 |
TGS1 WILD-TYPE | 145 | 129 | 115 |
P value = 0.709 (Fisher's exact test), Q value = 1
Table S549. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TGS1 MUTATED | 0 | 1 | 1 | 1 | 1 |
TGS1 WILD-TYPE | 59 | 108 | 89 | 103 | 30 |
P value = 0.756 (Fisher's exact test), Q value = 1
Table S550. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TGS1 MUTATED | 2 | 1 | 3 | 4 | 2 | 1 | 0 |
TGS1 WILD-TYPE | 177 | 134 | 212 | 152 | 223 | 47 | 15 |
P value = 0.0796 (Fisher's exact test), Q value = 1
Table S551. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TGS1 MUTATED | 1 | 2 | 3 | 6 | 0 | 1 |
TGS1 WILD-TYPE | 167 | 220 | 185 | 166 | 171 | 51 |
P value = 0.193 (Fisher's exact test), Q value = 1
Table S552. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TGS1 MUTATED | 4 | 8 | 1 |
TGS1 WILD-TYPE | 266 | 405 | 273 |
P value = 0.155 (Fisher's exact test), Q value = 1
Table S553. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TGS1 MUTATED | 3 | 1 | 9 | 0 | 0 |
TGS1 WILD-TYPE | 149 | 173 | 381 | 125 | 116 |
P value = 0.802 (Fisher's exact test), Q value = 1
Table S554. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TGS1 MUTATED | 3 | 3 | 1 |
TGS1 WILD-TYPE | 245 | 214 | 186 |
P value = 0.0866 (Fisher's exact test), Q value = 1
Table S555. Gene #47: 'TGS1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TGS1 MUTATED | 0 | 0 | 3 | 0 | 4 | 0 |
TGS1 WILD-TYPE | 115 | 63 | 186 | 117 | 104 | 60 |
P value = 0.837 (Fisher's exact test), Q value = 1
Table S556. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
USP36 MUTATED | 0 | 0 | 2 | 3 | 2 | 0 | 0 | 0 |
USP36 WILD-TYPE | 21 | 38 | 112 | 94 | 106 | 73 | 19 | 39 |
P value = 0.183 (Fisher's exact test), Q value = 1
Table S557. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
USP36 MUTATED | 2 | 1 | 0 | 3 | 1 |
USP36 WILD-TYPE | 94 | 151 | 116 | 86 | 55 |
P value = 1 (Fisher's exact test), Q value = 1
Table S558. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
USP36 MUTATED | 3 | 2 | 1 | 2 | 0 |
USP36 WILD-TYPE | 364 | 224 | 90 | 239 | 37 |
P value = 1 (Fisher's exact test), Q value = 1
Table S559. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
USP36 MUTATED | 1 | 1 | 1 | 0 | 0 |
USP36 WILD-TYPE | 115 | 180 | 156 | 83 | 111 |
P value = 0.714 (Fisher's exact test), Q value = 1
Table S560. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
USP36 MUTATED | 3 | 3 | 1 |
USP36 WILD-TYPE | 143 | 126 | 117 |
P value = 0.315 (Fisher's exact test), Q value = 1
Table S561. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
USP36 MUTATED | 1 | 0 | 3 | 3 | 0 |
USP36 WILD-TYPE | 58 | 109 | 87 | 101 | 31 |
P value = 0.554 (Fisher's exact test), Q value = 1
Table S562. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
USP36 MUTATED | 3 | 0 | 2 | 0 | 3 | 0 | 0 |
USP36 WILD-TYPE | 176 | 135 | 213 | 156 | 222 | 48 | 15 |
P value = 0.128 (Fisher's exact test), Q value = 1
Table S563. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
USP36 MUTATED | 3 | 0 | 2 | 0 | 3 | 0 |
USP36 WILD-TYPE | 165 | 222 | 186 | 172 | 168 | 52 |
P value = 0.904 (Fisher's exact test), Q value = 1
Table S564. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
USP36 MUTATED | 2 | 3 | 3 |
USP36 WILD-TYPE | 268 | 410 | 271 |
P value = 0.363 (Fisher's exact test), Q value = 1
Table S565. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
USP36 MUTATED | 1 | 1 | 3 | 3 | 0 |
USP36 WILD-TYPE | 151 | 173 | 387 | 122 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S566. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
USP36 MUTATED | 2 | 1 | 1 |
USP36 WILD-TYPE | 246 | 216 | 186 |
P value = 0.902 (Fisher's exact test), Q value = 1
Table S567. Gene #48: 'USP36 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
USP36 MUTATED | 1 | 0 | 2 | 0 | 1 | 0 |
USP36 WILD-TYPE | 114 | 63 | 187 | 117 | 107 | 60 |
P value = 0.944 (Fisher's exact test), Q value = 1
Table S568. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ASB10 MUTATED | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 |
ASB10 WILD-TYPE | 21 | 38 | 113 | 96 | 106 | 73 | 19 | 39 |
P value = 0.0647 (Fisher's exact test), Q value = 1
Table S569. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ASB10 MUTATED | 1 | 0 | 1 | 0 | 2 |
ASB10 WILD-TYPE | 95 | 152 | 115 | 89 | 54 |
P value = 1 (Fisher's exact test), Q value = 1
Table S570. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ASB10 MUTATED | 3 | 2 | 1 | 2 | 0 |
ASB10 WILD-TYPE | 364 | 224 | 90 | 239 | 37 |
P value = 0.5 (Fisher's exact test), Q value = 1
Table S571. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ASB10 MUTATED | 2 | 4 | 1 | 1 | 0 |
ASB10 WILD-TYPE | 114 | 177 | 156 | 82 | 111 |
P value = 0.763 (Fisher's exact test), Q value = 1
Table S572. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ASB10 MUTATED | 2 | 0 | 3 | 2 | 1 | 0 | 0 |
ASB10 WILD-TYPE | 177 | 135 | 212 | 154 | 224 | 48 | 15 |
P value = 0.828 (Fisher's exact test), Q value = 1
Table S573. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ASB10 MUTATED | 1 | 1 | 2 | 3 | 1 | 0 |
ASB10 WILD-TYPE | 167 | 221 | 186 | 169 | 170 | 52 |
P value = 0.106 (Fisher's exact test), Q value = 1
Table S574. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ASB10 MUTATED | 0 | 6 | 2 |
ASB10 WILD-TYPE | 270 | 407 | 272 |
P value = 0.222 (Fisher's exact test), Q value = 1
Table S575. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ASB10 MUTATED | 1 | 4 | 2 | 0 | 1 |
ASB10 WILD-TYPE | 151 | 170 | 388 | 125 | 115 |
P value = 0.862 (Fisher's exact test), Q value = 1
Table S576. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ASB10 MUTATED | 2 | 1 | 2 |
ASB10 WILD-TYPE | 246 | 216 | 185 |
P value = 0.643 (Fisher's exact test), Q value = 1
Table S577. Gene #49: 'ASB10 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ASB10 MUTATED | 1 | 1 | 1 | 0 | 1 | 1 |
ASB10 WILD-TYPE | 114 | 62 | 188 | 117 | 107 | 59 |
P value = 0.234 (Fisher's exact test), Q value = 1
Table S578. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
EIF4A2 MUTATED | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 |
EIF4A2 WILD-TYPE | 20 | 38 | 113 | 97 | 108 | 72 | 19 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S579. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
EIF4A2 MUTATED | 1 | 1 | 1 | 0 | 0 |
EIF4A2 WILD-TYPE | 95 | 151 | 115 | 89 | 56 |
P value = 0.884 (Fisher's exact test), Q value = 1
Table S580. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
EIF4A2 MUTATED | 5 | 2 | 0 | 2 | 0 |
EIF4A2 WILD-TYPE | 362 | 224 | 91 | 239 | 37 |
P value = 0.229 (Fisher's exact test), Q value = 1
Table S581. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
EIF4A2 MUTATED | 2 | 0 | 3 | 0 | 1 |
EIF4A2 WILD-TYPE | 114 | 181 | 154 | 83 | 110 |
P value = 1 (Fisher's exact test), Q value = 1
Table S582. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
EIF4A2 MUTATED | 1 | 1 | 1 |
EIF4A2 WILD-TYPE | 145 | 128 | 117 |
P value = 0.188 (Fisher's exact test), Q value = 1
Table S583. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
EIF4A2 MUTATED | 1 | 0 | 0 | 1 | 1 |
EIF4A2 WILD-TYPE | 58 | 109 | 90 | 103 | 30 |
P value = 0.0391 (Fisher's exact test), Q value = 1
Table S584. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
EIF4A2 MUTATED | 1 | 0 | 1 | 4 | 1 | 1 | 1 |
EIF4A2 WILD-TYPE | 178 | 135 | 214 | 152 | 224 | 47 | 14 |
Figure S118. Get High-res Image Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D50V7.png)
P value = 0.0699 (Fisher's exact test), Q value = 1
Table S585. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
EIF4A2 MUTATED | 1 | 2 | 1 | 1 | 1 | 3 |
EIF4A2 WILD-TYPE | 167 | 220 | 187 | 171 | 170 | 49 |
P value = 0.763 (Fisher's exact test), Q value = 1
Table S586. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
EIF4A2 MUTATED | 3 | 3 | 3 |
EIF4A2 WILD-TYPE | 267 | 410 | 271 |
P value = 0.212 (Fisher's exact test), Q value = 1
Table S587. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
EIF4A2 MUTATED | 0 | 0 | 6 | 1 | 2 |
EIF4A2 WILD-TYPE | 152 | 174 | 384 | 124 | 114 |
P value = 0.592 (Fisher's exact test), Q value = 1
Table S588. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
EIF4A2 MUTATED | 1 | 3 | 2 |
EIF4A2 WILD-TYPE | 247 | 214 | 185 |
P value = 0.184 (Fisher's exact test), Q value = 1
Table S589. Gene #50: 'EIF4A2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
EIF4A2 MUTATED | 1 | 0 | 1 | 0 | 2 | 2 |
EIF4A2 WILD-TYPE | 114 | 63 | 188 | 117 | 106 | 58 |
P value = 1 (Fisher's exact test), Q value = 1
Table S590. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
DNAH12 MUTATED | 0 | 0 | 2 | 2 | 2 | 1 | 0 | 1 |
DNAH12 WILD-TYPE | 21 | 38 | 112 | 95 | 106 | 72 | 19 | 38 |
P value = 0.734 (Fisher's exact test), Q value = 1
Table S591. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
DNAH12 MUTATED | 1 | 4 | 1 | 2 | 0 |
DNAH12 WILD-TYPE | 95 | 148 | 115 | 87 | 56 |
P value = 0.627 (Fisher's exact test), Q value = 1
Table S592. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
DNAH12 MUTATED | 9 | 5 | 1 | 2 | 0 |
DNAH12 WILD-TYPE | 358 | 221 | 90 | 239 | 37 |
P value = 0.41 (Fisher's exact test), Q value = 1
Table S593. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
DNAH12 MUTATED | 1 | 6 | 3 | 0 | 3 |
DNAH12 WILD-TYPE | 115 | 175 | 154 | 83 | 108 |
P value = 0.453 (Fisher's exact test), Q value = 1
Table S594. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
DNAH12 MUTATED | 1 | 1 | 3 |
DNAH12 WILD-TYPE | 145 | 128 | 115 |
P value = 0.879 (Fisher's exact test), Q value = 1
Table S595. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
DNAH12 MUTATED | 1 | 1 | 2 | 1 | 0 |
DNAH12 WILD-TYPE | 58 | 108 | 88 | 103 | 31 |
P value = 0.156 (Fisher's exact test), Q value = 1
Table S596. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
DNAH12 MUTATED | 5 | 0 | 3 | 2 | 5 | 3 | 0 |
DNAH12 WILD-TYPE | 174 | 135 | 212 | 154 | 220 | 45 | 15 |
P value = 0.926 (Fisher's exact test), Q value = 1
Table S597. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
DNAH12 MUTATED | 4 | 4 | 4 | 4 | 2 | 0 |
DNAH12 WILD-TYPE | 164 | 218 | 184 | 168 | 169 | 52 |
P value = 0.715 (Fisher's exact test), Q value = 1
Table S598. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
DNAH12 MUTATED | 6 | 6 | 6 |
DNAH12 WILD-TYPE | 264 | 407 | 268 |
P value = 0.697 (Fisher's exact test), Q value = 1
Table S599. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
DNAH12 MUTATED | 4 | 4 | 6 | 1 | 3 |
DNAH12 WILD-TYPE | 148 | 170 | 384 | 124 | 113 |
P value = 0.287 (Fisher's exact test), Q value = 1
Table S600. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
DNAH12 MUTATED | 2 | 5 | 5 |
DNAH12 WILD-TYPE | 246 | 212 | 182 |
P value = 0.253 (Fisher's exact test), Q value = 1
Table S601. Gene #51: 'DNAH12 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
DNAH12 MUTATED | 3 | 0 | 3 | 1 | 5 | 0 |
DNAH12 WILD-TYPE | 112 | 63 | 186 | 116 | 103 | 60 |
P value = 0.829 (Fisher's exact test), Q value = 1
Table S602. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RHBG MUTATED | 1 | 2 | 0 | 1 | 0 |
RHBG WILD-TYPE | 366 | 224 | 91 | 240 | 37 |
P value = 0.188 (Fisher's exact test), Q value = 1
Table S603. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RHBG MUTATED | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
RHBG WILD-TYPE | 177 | 135 | 215 | 154 | 225 | 48 | 15 |
P value = 0.17 (Fisher's exact test), Q value = 1
Table S604. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RHBG MUTATED | 2 | 0 | 0 | 2 | 0 | 0 |
RHBG WILD-TYPE | 166 | 222 | 188 | 170 | 171 | 52 |
P value = 0.492 (Fisher's exact test), Q value = 1
Table S605. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RHBG MUTATED | 0 | 2 | 2 |
RHBG WILD-TYPE | 270 | 411 | 272 |
P value = 0.281 (Fisher's exact test), Q value = 1
Table S606. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RHBG MUTATED | 0 | 0 | 2 | 2 | 0 |
RHBG WILD-TYPE | 152 | 174 | 388 | 123 | 116 |
P value = 0.291 (Fisher's exact test), Q value = 1
Table S607. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RHBG MUTATED | 1 | 0 | 2 |
RHBG WILD-TYPE | 247 | 217 | 185 |
P value = 0.505 (Fisher's exact test), Q value = 1
Table S608. Gene #52: 'RHBG MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RHBG MUTATED | 2 | 0 | 1 | 0 | 0 | 0 |
RHBG WILD-TYPE | 113 | 63 | 188 | 117 | 108 | 60 |
P value = 0.945 (Fisher's exact test), Q value = 1
Table S609. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PAX2 MUTATED | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 |
PAX2 WILD-TYPE | 21 | 38 | 113 | 97 | 107 | 72 | 19 | 39 |
P value = 0.335 (Fisher's exact test), Q value = 1
Table S610. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PAX2 MUTATED | 1 | 0 | 1 | 0 | 1 |
PAX2 WILD-TYPE | 95 | 152 | 115 | 89 | 55 |
P value = 0.371 (Fisher's exact test), Q value = 1
Table S611. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PAX2 MUTATED | 1 | 0 | 0 | 3 | 0 |
PAX2 WILD-TYPE | 366 | 226 | 91 | 238 | 37 |
P value = 0.296 (Fisher's exact test), Q value = 1
Table S612. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PAX2 MUTATED | 0 | 2 | 1 |
PAX2 WILD-TYPE | 146 | 127 | 117 |
P value = 0.379 (Fisher's exact test), Q value = 1
Table S613. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PAX2 MUTATED | 1 | 2 | 0 | 0 | 0 |
PAX2 WILD-TYPE | 58 | 107 | 90 | 104 | 31 |
P value = 0.318 (Fisher's exact test), Q value = 1
Table S614. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PAX2 MUTATED | 0 | 0 | 0 | 1 | 3 | 0 | 0 |
PAX2 WILD-TYPE | 179 | 135 | 215 | 155 | 222 | 48 | 15 |
P value = 0.254 (Fisher's exact test), Q value = 1
Table S615. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PAX2 MUTATED | 0 | 0 | 1 | 1 | 1 | 1 |
PAX2 WILD-TYPE | 168 | 222 | 187 | 171 | 170 | 51 |
P value = 0.0978 (Fisher's exact test), Q value = 1
Table S616. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PAX2 MUTATED | 0 | 4 | 0 |
PAX2 WILD-TYPE | 270 | 409 | 274 |
P value = 0.943 (Fisher's exact test), Q value = 1
Table S617. Gene #53: 'PAX2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PAX2 MUTATED | 0 | 1 | 3 | 0 | 0 |
PAX2 WILD-TYPE | 152 | 173 | 387 | 125 | 116 |
P value = 0.564 (Fisher's exact test), Q value = 1
Table S618. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FXYD5 MUTATED | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 |
FXYD5 WILD-TYPE | 21 | 37 | 113 | 96 | 108 | 73 | 19 | 39 |
P value = 0.787 (Fisher's exact test), Q value = 1
Table S619. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FXYD5 MUTATED | 1 | 1 | 0 | 1 | 0 |
FXYD5 WILD-TYPE | 95 | 151 | 116 | 88 | 56 |
P value = 0.567 (Fisher's exact test), Q value = 1
Table S620. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FXYD5 MUTATED | 4 | 0 | 0 | 1 | 0 |
FXYD5 WILD-TYPE | 363 | 226 | 91 | 240 | 37 |
P value = 0.642 (Fisher's exact test), Q value = 1
Table S621. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
FXYD5 MUTATED | 2 | 0 | 1 |
FXYD5 WILD-TYPE | 144 | 129 | 117 |
P value = 1 (Fisher's exact test), Q value = 1
Table S622. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
FXYD5 MUTATED | 0 | 1 | 1 | 1 | 0 |
FXYD5 WILD-TYPE | 59 | 108 | 89 | 103 | 31 |
P value = 0.178 (Fisher's exact test), Q value = 1
Table S623. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FXYD5 MUTATED | 1 | 3 | 0 | 0 | 1 | 0 | 0 |
FXYD5 WILD-TYPE | 178 | 132 | 215 | 156 | 224 | 48 | 15 |
P value = 0.484 (Fisher's exact test), Q value = 1
Table S624. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FXYD5 MUTATED | 1 | 3 | 0 | 1 | 0 | 0 |
FXYD5 WILD-TYPE | 167 | 219 | 188 | 171 | 171 | 52 |
P value = 0.337 (Fisher's exact test), Q value = 1
Table S625. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FXYD5 MUTATED | 3 | 1 | 1 |
FXYD5 WILD-TYPE | 267 | 412 | 273 |
P value = 0.398 (Fisher's exact test), Q value = 1
Table S626. Gene #54: 'FXYD5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FXYD5 MUTATED | 2 | 0 | 2 | 0 | 1 |
FXYD5 WILD-TYPE | 150 | 174 | 388 | 125 | 115 |
P value = 0.149 (Fisher's exact test), Q value = 1
Table S627. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
BCORL1 MUTATED | 0 | 3 | 2 | 2 | 0 | 1 | 0 | 0 |
BCORL1 WILD-TYPE | 21 | 35 | 112 | 95 | 108 | 72 | 19 | 39 |
P value = 0.833 (Fisher's exact test), Q value = 1
Table S628. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
BCORL1 MUTATED | 2 | 3 | 1 | 2 | 0 |
BCORL1 WILD-TYPE | 94 | 149 | 115 | 87 | 56 |
P value = 0.542 (Fisher's exact test), Q value = 1
Table S629. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
BCORL1 MUTATED | 5 | 6 | 0 | 4 | 0 |
BCORL1 WILD-TYPE | 362 | 220 | 91 | 237 | 37 |
P value = 0.172 (Fisher's exact test), Q value = 1
Table S630. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
BCORL1 MUTATED | 4 | 1 | 3 | 1 | 0 |
BCORL1 WILD-TYPE | 112 | 180 | 154 | 82 | 111 |
P value = 0.29 (Fisher's exact test), Q value = 1
Table S631. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
BCORL1 MUTATED | 3 | 3 | 0 |
BCORL1 WILD-TYPE | 143 | 126 | 118 |
P value = 0.00796 (Fisher's exact test), Q value = 1
Table S632. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
BCORL1 MUTATED | 0 | 0 | 1 | 2 | 3 |
BCORL1 WILD-TYPE | 59 | 109 | 89 | 102 | 28 |
Figure S119. Get High-res Image Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D55V6.png)
P value = 0.447 (Fisher's exact test), Q value = 1
Table S633. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
BCORL1 MUTATED | 4 | 3 | 1 | 4 | 2 | 1 | 0 |
BCORL1 WILD-TYPE | 175 | 132 | 214 | 152 | 223 | 47 | 15 |
P value = 0.331 (Fisher's exact test), Q value = 1
Table S634. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
BCORL1 MUTATED | 4 | 4 | 0 | 3 | 3 | 1 |
BCORL1 WILD-TYPE | 164 | 218 | 188 | 169 | 168 | 51 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S635. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
BCORL1 MUTATED | 3 | 5 | 7 |
BCORL1 WILD-TYPE | 267 | 408 | 267 |
P value = 0.872 (Fisher's exact test), Q value = 1
Table S636. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
BCORL1 MUTATED | 2 | 3 | 5 | 3 | 2 |
BCORL1 WILD-TYPE | 150 | 171 | 385 | 122 | 114 |
P value = 0.381 (Fisher's exact test), Q value = 1
Table S637. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
BCORL1 MUTATED | 6 | 2 | 5 |
BCORL1 WILD-TYPE | 242 | 215 | 182 |
P value = 0.641 (Fisher's exact test), Q value = 1
Table S638. Gene #55: 'BCORL1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
BCORL1 MUTATED | 4 | 2 | 4 | 1 | 1 | 1 |
BCORL1 WILD-TYPE | 111 | 61 | 185 | 116 | 107 | 59 |
P value = 0.881 (Fisher's exact test), Q value = 1
Table S639. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZNF362 MUTATED | 0 | 0 | 2 | 0 | 2 | 1 | 0 | 0 |
ZNF362 WILD-TYPE | 21 | 38 | 112 | 97 | 106 | 72 | 19 | 39 |
P value = 0.871 (Fisher's exact test), Q value = 1
Table S640. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZNF362 MUTATED | 1 | 2 | 1 | 0 | 1 |
ZNF362 WILD-TYPE | 95 | 150 | 115 | 89 | 55 |
P value = 0.103 (Fisher's exact test), Q value = 1
Table S641. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZNF362 MUTATED | 1 | 0 | 1 | 1 | 1 |
ZNF362 WILD-TYPE | 366 | 226 | 90 | 240 | 36 |
P value = 0.153 (Fisher's exact test), Q value = 1
Table S642. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ZNF362 MUTATED | 0 | 3 | 1 |
ZNF362 WILD-TYPE | 146 | 126 | 117 |
P value = 0.744 (Fisher's exact test), Q value = 1
Table S643. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ZNF362 MUTATED | 1 | 1 | 0 | 2 | 0 |
ZNF362 WILD-TYPE | 58 | 108 | 90 | 102 | 31 |
P value = 0.409 (Fisher's exact test), Q value = 1
Table S644. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZNF362 MUTATED | 0 | 1 | 0 | 1 | 3 | 0 | 0 |
ZNF362 WILD-TYPE | 179 | 134 | 215 | 155 | 222 | 48 | 15 |
P value = 0.0502 (Fisher's exact test), Q value = 1
Table S645. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZNF362 MUTATED | 0 | 1 | 0 | 0 | 3 | 1 |
ZNF362 WILD-TYPE | 168 | 221 | 188 | 172 | 168 | 51 |
P value = 0.237 (Fisher's exact test), Q value = 1
Table S646. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZNF362 MUTATED | 1 | 4 | 0 |
ZNF362 WILD-TYPE | 269 | 409 | 274 |
P value = 0.0464 (Fisher's exact test), Q value = 1
Table S647. Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZNF362 MUTATED | 0 | 4 | 1 | 0 | 0 |
ZNF362 WILD-TYPE | 152 | 170 | 389 | 125 | 116 |
Figure S120. Get High-res Image Gene #56: 'ZNF362 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D56V10.png)
P value = 0.229 (Fisher's exact test), Q value = 1
Table S648. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PTHLH MUTATED | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 1 |
PTHLH WILD-TYPE | 21 | 37 | 114 | 97 | 107 | 71 | 19 | 38 |
P value = 0.897 (Fisher's exact test), Q value = 1
Table S649. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PTHLH MUTATED | 1 | 2 | 2 | 0 | 0 |
PTHLH WILD-TYPE | 95 | 150 | 114 | 89 | 56 |
P value = 0.0132 (Fisher's exact test), Q value = 1
Table S650. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PTHLH MUTATED | 1 | 1 | 2 | 1 | 2 |
PTHLH WILD-TYPE | 366 | 225 | 89 | 240 | 35 |
Figure S121. Get High-res Image Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D57V3.png)
P value = 0.181 (Fisher's exact test), Q value = 1
Table S651. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PTHLH MUTATED | 1 | 0 | 3 | 1 | 0 |
PTHLH WILD-TYPE | 115 | 181 | 154 | 82 | 111 |
P value = 0.69 (Fisher's exact test), Q value = 1
Table S652. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PTHLH MUTATED | 1 | 1 | 2 |
PTHLH WILD-TYPE | 145 | 128 | 116 |
P value = 0.678 (Fisher's exact test), Q value = 1
Table S653. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PTHLH MUTATED | 0 | 2 | 0 | 2 | 0 |
PTHLH WILD-TYPE | 59 | 107 | 90 | 102 | 31 |
P value = 0.0489 (Fisher's exact test), Q value = 1
Table S654. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PTHLH MUTATED | 0 | 1 | 3 | 1 | 0 | 2 | 0 |
PTHLH WILD-TYPE | 179 | 134 | 212 | 155 | 225 | 46 | 15 |
Figure S122. Get High-res Image Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D57V7.png)
P value = 0.646 (Fisher's exact test), Q value = 1
Table S655. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PTHLH MUTATED | 0 | 2 | 1 | 1 | 3 | 0 |
PTHLH WILD-TYPE | 168 | 220 | 187 | 171 | 168 | 52 |
P value = 0.16 (Fisher's exact test), Q value = 1
Table S656. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PTHLH MUTATED | 1 | 5 | 0 |
PTHLH WILD-TYPE | 269 | 408 | 274 |
P value = 0.595 (Fisher's exact test), Q value = 1
Table S657. Gene #57: 'PTHLH MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PTHLH MUTATED | 0 | 2 | 4 | 0 | 0 |
PTHLH WILD-TYPE | 152 | 172 | 386 | 125 | 116 |
P value = 0.602 (Fisher's exact test), Q value = 1
Table S658. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GPRIN2 MUTATED | 0 | 1 | 0 | 2 | 3 | 1 | 0 | 0 |
GPRIN2 WILD-TYPE | 21 | 37 | 114 | 95 | 105 | 72 | 19 | 39 |
P value = 0.627 (Fisher's exact test), Q value = 1
Table S659. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GPRIN2 MUTATED | 0 | 3 | 1 | 2 | 1 |
GPRIN2 WILD-TYPE | 96 | 149 | 115 | 87 | 55 |
P value = 0.887 (Fisher's exact test), Q value = 1
Table S660. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GPRIN2 MUTATED | 4 | 3 | 0 | 4 | 0 |
GPRIN2 WILD-TYPE | 363 | 223 | 91 | 237 | 37 |
P value = 0.64 (Fisher's exact test), Q value = 1
Table S661. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
GPRIN2 MUTATED | 2 | 3 | 2 | 0 | 0 |
GPRIN2 WILD-TYPE | 114 | 178 | 155 | 83 | 111 |
P value = 0.877 (Fisher's exact test), Q value = 1
Table S662. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GPRIN2 MUTATED | 3 | 2 | 1 |
GPRIN2 WILD-TYPE | 143 | 127 | 117 |
P value = 0.0416 (Fisher's exact test), Q value = 1
Table S663. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GPRIN2 MUTATED | 2 | 0 | 1 | 1 | 2 |
GPRIN2 WILD-TYPE | 57 | 109 | 89 | 103 | 29 |
Figure S123. Get High-res Image Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D58V6.png)
P value = 0.789 (Fisher's exact test), Q value = 1
Table S664. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GPRIN2 MUTATED | 3 | 1 | 4 | 2 | 1 | 0 | 0 |
GPRIN2 WILD-TYPE | 176 | 134 | 211 | 154 | 224 | 48 | 15 |
P value = 0.233 (Fisher's exact test), Q value = 1
Table S665. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GPRIN2 MUTATED | 4 | 1 | 3 | 3 | 0 | 0 |
GPRIN2 WILD-TYPE | 164 | 221 | 185 | 169 | 171 | 52 |
P value = 0.783 (Fisher's exact test), Q value = 1
Table S666. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GPRIN2 MUTATED | 2 | 4 | 4 |
GPRIN2 WILD-TYPE | 268 | 409 | 270 |
P value = 0.0682 (Fisher's exact test), Q value = 1
Table S667. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GPRIN2 MUTATED | 1 | 3 | 2 | 4 | 0 |
GPRIN2 WILD-TYPE | 151 | 171 | 388 | 121 | 116 |
P value = 0.588 (Fisher's exact test), Q value = 1
Table S668. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
GPRIN2 MUTATED | 3 | 2 | 4 |
GPRIN2 WILD-TYPE | 245 | 215 | 183 |
P value = 0.22 (Fisher's exact test), Q value = 1
Table S669. Gene #58: 'GPRIN2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
GPRIN2 MUTATED | 4 | 0 | 4 | 0 | 1 | 0 |
GPRIN2 WILD-TYPE | 111 | 63 | 185 | 117 | 107 | 60 |
P value = 0.277 (Fisher's exact test), Q value = 1
Table S670. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ANKRD12 MUTATED | 0 | 1 | 6 | 0 | 2 | 1 | 0 | 0 |
ANKRD12 WILD-TYPE | 21 | 37 | 108 | 97 | 106 | 72 | 19 | 39 |
P value = 0.132 (Fisher's exact test), Q value = 1
Table S671. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ANKRD12 MUTATED | 4 | 5 | 1 | 0 | 0 |
ANKRD12 WILD-TYPE | 92 | 147 | 115 | 89 | 56 |
P value = 0.563 (Fisher's exact test), Q value = 1
Table S672. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ANKRD12 MUTATED | 7 | 2 | 3 | 5 | 0 |
ANKRD12 WILD-TYPE | 360 | 224 | 88 | 236 | 37 |
P value = 0.875 (Fisher's exact test), Q value = 1
Table S673. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ANKRD12 MUTATED | 1 | 3 | 3 | 1 | 3 |
ANKRD12 WILD-TYPE | 115 | 178 | 154 | 82 | 108 |
P value = 0.385 (Fisher's exact test), Q value = 1
Table S674. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ANKRD12 MUTATED | 4 | 1 | 1 |
ANKRD12 WILD-TYPE | 142 | 128 | 117 |
P value = 0.121 (Fisher's exact test), Q value = 1
Table S675. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ANKRD12 MUTATED | 0 | 1 | 0 | 4 | 1 |
ANKRD12 WILD-TYPE | 59 | 108 | 90 | 100 | 30 |
P value = 0.19 (Fisher's exact test), Q value = 1
Table S676. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ANKRD12 MUTATED | 1 | 3 | 2 | 3 | 6 | 3 | 0 |
ANKRD12 WILD-TYPE | 178 | 132 | 213 | 153 | 219 | 45 | 15 |
P value = 0.0329 (Fisher's exact test), Q value = 1
Table S677. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ANKRD12 MUTATED | 1 | 8 | 0 | 5 | 4 | 0 |
ANKRD12 WILD-TYPE | 167 | 214 | 188 | 167 | 167 | 52 |
Figure S124. Get High-res Image Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D59V8.png)
P value = 0.655 (Fisher's exact test), Q value = 1
Table S678. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ANKRD12 MUTATED | 4 | 10 | 4 |
ANKRD12 WILD-TYPE | 266 | 403 | 270 |
P value = 0.934 (Fisher's exact test), Q value = 1
Table S679. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ANKRD12 MUTATED | 3 | 3 | 9 | 1 | 2 |
ANKRD12 WILD-TYPE | 149 | 171 | 381 | 124 | 114 |
P value = 1 (Fisher's exact test), Q value = 1
Table S680. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ANKRD12 MUTATED | 3 | 3 | 3 |
ANKRD12 WILD-TYPE | 245 | 214 | 184 |
P value = 0.538 (Fisher's exact test), Q value = 1
Table S681. Gene #59: 'ANKRD12 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ANKRD12 MUTATED | 1 | 2 | 2 | 1 | 3 | 0 |
ANKRD12 WILD-TYPE | 114 | 61 | 187 | 116 | 105 | 60 |
P value = 0.342 (Fisher's exact test), Q value = 1
Table S682. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZNF687 MUTATED | 0 | 2 | 2 | 4 | 1 | 0 | 0 | 0 |
ZNF687 WILD-TYPE | 21 | 36 | 112 | 93 | 107 | 73 | 19 | 39 |
P value = 0.129 (Fisher's exact test), Q value = 1
Table S683. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZNF687 MUTATED | 2 | 3 | 0 | 4 | 0 |
ZNF687 WILD-TYPE | 94 | 149 | 116 | 85 | 56 |
P value = 0.347 (Fisher's exact test), Q value = 1
Table S684. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZNF687 MUTATED | 3 | 2 | 0 | 6 | 0 |
ZNF687 WILD-TYPE | 364 | 224 | 91 | 235 | 37 |
P value = 0.132 (Fisher's exact test), Q value = 1
Table S685. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZNF687 MUTATED | 4 | 2 | 1 | 0 | 0 |
ZNF687 WILD-TYPE | 112 | 179 | 156 | 83 | 111 |
P value = 0.13 (Fisher's exact test), Q value = 1
Table S686. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ZNF687 MUTATED | 6 | 1 | 1 |
ZNF687 WILD-TYPE | 140 | 128 | 117 |
P value = 0.0863 (Fisher's exact test), Q value = 1
Table S687. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ZNF687 MUTATED | 0 | 0 | 4 | 3 | 1 |
ZNF687 WILD-TYPE | 59 | 109 | 86 | 101 | 30 |
P value = 0.0397 (Fisher's exact test), Q value = 1
Table S688. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZNF687 MUTATED | 6 | 1 | 0 | 0 | 4 | 0 | 0 |
ZNF687 WILD-TYPE | 173 | 134 | 215 | 156 | 221 | 48 | 15 |
Figure S125. Get High-res Image Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D60V7.png)
P value = 0.131 (Fisher's exact test), Q value = 1
Table S689. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZNF687 MUTATED | 5 | 2 | 0 | 1 | 3 | 0 |
ZNF687 WILD-TYPE | 163 | 220 | 188 | 171 | 168 | 52 |
P value = 0.224 (Fisher's exact test), Q value = 1
Table S690. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZNF687 MUTATED | 2 | 3 | 6 |
ZNF687 WILD-TYPE | 268 | 410 | 268 |
P value = 0.0335 (Fisher's exact test), Q value = 1
Table S691. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZNF687 MUTATED | 0 | 2 | 4 | 5 | 0 |
ZNF687 WILD-TYPE | 152 | 172 | 386 | 120 | 116 |
Figure S126. Get High-res Image Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D60V10.png)
P value = 0.525 (Fisher's exact test), Q value = 1
Table S692. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZNF687 MUTATED | 2 | 1 | 3 |
ZNF687 WILD-TYPE | 246 | 216 | 184 |
P value = 0.523 (Fisher's exact test), Q value = 1
Table S693. Gene #60: 'ZNF687 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZNF687 MUTATED | 3 | 0 | 2 | 1 | 0 | 0 |
ZNF687 WILD-TYPE | 112 | 63 | 187 | 116 | 108 | 60 |
P value = 0.145 (Fisher's exact test), Q value = 1
Table S694. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
KCNN3 MUTATED | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 1 |
KCNN3 WILD-TYPE | 20 | 38 | 114 | 95 | 108 | 72 | 19 | 38 |
P value = 0.509 (Fisher's exact test), Q value = 1
Table S695. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
KCNN3 MUTATED | 0 | 1 | 2 | 2 | 0 |
KCNN3 WILD-TYPE | 96 | 151 | 114 | 87 | 56 |
P value = 0.216 (Fisher's exact test), Q value = 1
Table S696. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
KCNN3 MUTATED | 1 | 4 | 0 | 4 | 0 |
KCNN3 WILD-TYPE | 366 | 222 | 91 | 237 | 37 |
P value = 0.0979 (Fisher's exact test), Q value = 1
Table S697. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
KCNN3 MUTATED | 3 | 1 | 0 | 1 | 0 |
KCNN3 WILD-TYPE | 113 | 180 | 157 | 82 | 111 |
P value = 0.325 (Fisher's exact test), Q value = 1
Table S698. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
KCNN3 MUTATED | 3 | 0 | 1 |
KCNN3 WILD-TYPE | 143 | 129 | 117 |
P value = 0.829 (Fisher's exact test), Q value = 1
Table S699. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
KCNN3 MUTATED | 0 | 1 | 2 | 1 | 0 |
KCNN3 WILD-TYPE | 59 | 108 | 88 | 103 | 31 |
P value = 0.0756 (Fisher's exact test), Q value = 1
Table S700. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
KCNN3 MUTATED | 2 | 2 | 0 | 2 | 1 | 1 | 1 |
KCNN3 WILD-TYPE | 177 | 133 | 215 | 154 | 224 | 47 | 14 |
P value = 0.156 (Fisher's exact test), Q value = 1
Table S701. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
KCNN3 MUTATED | 2 | 1 | 0 | 4 | 1 | 1 |
KCNN3 WILD-TYPE | 166 | 221 | 188 | 168 | 170 | 51 |
P value = 0.259 (Fisher's exact test), Q value = 1
Table S702. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
KCNN3 MUTATED | 1 | 3 | 5 |
KCNN3 WILD-TYPE | 269 | 410 | 269 |
P value = 0.579 (Fisher's exact test), Q value = 1
Table S703. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
KCNN3 MUTATED | 0 | 1 | 5 | 1 | 2 |
KCNN3 WILD-TYPE | 152 | 173 | 385 | 124 | 114 |
P value = 0.279 (Fisher's exact test), Q value = 1
Table S704. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
KCNN3 MUTATED | 3 | 0 | 2 |
KCNN3 WILD-TYPE | 245 | 217 | 185 |
P value = 0.527 (Fisher's exact test), Q value = 1
Table S705. Gene #61: 'KCNN3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
KCNN3 MUTATED | 0 | 0 | 3 | 1 | 0 | 1 |
KCNN3 WILD-TYPE | 115 | 63 | 186 | 116 | 108 | 59 |
P value = 0.769 (Fisher's exact test), Q value = 1
Table S706. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ICOSLG MUTATED | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 |
ICOSLG WILD-TYPE | 21 | 38 | 112 | 96 | 108 | 73 | 19 | 39 |
P value = 0.131 (Fisher's exact test), Q value = 1
Table S707. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ICOSLG MUTATED | 2 | 0 | 0 | 1 | 0 |
ICOSLG WILD-TYPE | 94 | 152 | 116 | 88 | 56 |
P value = 0.0072 (Fisher's exact test), Q value = 1
Table S708. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ICOSLG MUTATED | 0 | 1 | 0 | 2 | 2 |
ICOSLG WILD-TYPE | 367 | 225 | 91 | 239 | 35 |
Figure S127. Get High-res Image Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D62V3.png)
P value = 0.517 (Fisher's exact test), Q value = 1
Table S709. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ICOSLG MUTATED | 1 | 0 | 2 | 0 | 1 |
ICOSLG WILD-TYPE | 115 | 181 | 155 | 83 | 110 |
P value = 0.822 (Fisher's exact test), Q value = 1
Table S710. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ICOSLG MUTATED | 1 | 0 | 2 | 0 | 2 | 0 | 0 |
ICOSLG WILD-TYPE | 178 | 135 | 213 | 156 | 223 | 48 | 15 |
P value = 0.767 (Fisher's exact test), Q value = 1
Table S711. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ICOSLG MUTATED | 1 | 1 | 0 | 2 | 1 | 0 |
ICOSLG WILD-TYPE | 167 | 221 | 188 | 170 | 170 | 52 |
P value = 0.287 (Fisher's exact test), Q value = 1
Table S712. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ICOSLG MUTATED | 0 | 4 | 1 |
ICOSLG WILD-TYPE | 270 | 409 | 273 |
P value = 0.825 (Fisher's exact test), Q value = 1
Table S713. Gene #62: 'ICOSLG MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ICOSLG MUTATED | 0 | 1 | 2 | 1 | 1 |
ICOSLG WILD-TYPE | 152 | 173 | 388 | 124 | 115 |
P value = 0.147 (Fisher's exact test), Q value = 1
Table S714. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PIK3R1 MUTATED | 0 | 0 | 1 | 1 | 1 | 5 | 0 | 0 |
PIK3R1 WILD-TYPE | 21 | 38 | 113 | 96 | 107 | 68 | 19 | 39 |
P value = 0.185 (Fisher's exact test), Q value = 1
Table S715. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PIK3R1 MUTATED | 1 | 1 | 5 | 1 | 0 |
PIK3R1 WILD-TYPE | 95 | 151 | 111 | 88 | 56 |
P value = 0.646 (Fisher's exact test), Q value = 1
Table S716. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PIK3R1 MUTATED | 4 | 5 | 1 | 4 | 1 |
PIK3R1 WILD-TYPE | 363 | 221 | 90 | 237 | 36 |
P value = 0.239 (Fisher's exact test), Q value = 1
Table S717. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PIK3R1 MUTATED | 3 | 1 | 3 | 0 | 0 |
PIK3R1 WILD-TYPE | 113 | 180 | 154 | 83 | 111 |
P value = 0.632 (Fisher's exact test), Q value = 1
Table S718. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PIK3R1 MUTATED | 3 | 1 | 1 |
PIK3R1 WILD-TYPE | 143 | 128 | 117 |
P value = 0.0117 (Fisher's exact test), Q value = 1
Table S719. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PIK3R1 MUTATED | 0 | 0 | 0 | 3 | 2 |
PIK3R1 WILD-TYPE | 59 | 109 | 90 | 101 | 29 |
Figure S128. Get High-res Image Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D63V6.png)
P value = 0.13 (Fisher's exact test), Q value = 1
Table S720. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PIK3R1 MUTATED | 3 | 1 | 3 | 7 | 1 | 0 | 0 |
PIK3R1 WILD-TYPE | 176 | 134 | 212 | 149 | 224 | 48 | 15 |
P value = 0.071 (Fisher's exact test), Q value = 1
Table S721. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PIK3R1 MUTATED | 3 | 1 | 1 | 7 | 2 | 1 |
PIK3R1 WILD-TYPE | 165 | 221 | 187 | 165 | 169 | 51 |
P value = 0.0204 (Fisher's exact test), Q value = 1
Table S722. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PIK3R1 MUTATED | 0 | 10 | 4 |
PIK3R1 WILD-TYPE | 270 | 403 | 270 |
Figure S129. Get High-res Image Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D63V9.png)
P value = 0.347 (Fisher's exact test), Q value = 1
Table S723. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PIK3R1 MUTATED | 0 | 2 | 8 | 3 | 1 |
PIK3R1 WILD-TYPE | 152 | 172 | 382 | 122 | 115 |
P value = 0.138 (Fisher's exact test), Q value = 1
Table S724. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PIK3R1 MUTATED | 7 | 1 | 3 |
PIK3R1 WILD-TYPE | 241 | 216 | 184 |
P value = 0.725 (Fisher's exact test), Q value = 1
Table S725. Gene #63: 'PIK3R1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PIK3R1 MUTATED | 3 | 0 | 5 | 1 | 1 | 1 |
PIK3R1 WILD-TYPE | 112 | 63 | 184 | 116 | 107 | 59 |
P value = 0.213 (Fisher's exact test), Q value = 1
Table S726. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MR1 MUTATED | 0 | 2 | 0 | 1 | 2 | 0 | 0 | 0 |
MR1 WILD-TYPE | 21 | 36 | 114 | 96 | 106 | 73 | 19 | 39 |
P value = 0.703 (Fisher's exact test), Q value = 1
Table S727. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MR1 MUTATED | 0 | 3 | 1 | 1 | 0 |
MR1 WILD-TYPE | 96 | 149 | 115 | 88 | 56 |
P value = 0.894 (Fisher's exact test), Q value = 1
Table S728. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MR1 MUTATED | 3 | 2 | 1 | 1 | 0 |
MR1 WILD-TYPE | 364 | 224 | 90 | 240 | 37 |
P value = 0.346 (Fisher's exact test), Q value = 1
Table S729. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MR1 MUTATED | 0 | 0 | 2 | 0 | 1 |
MR1 WILD-TYPE | 116 | 181 | 155 | 83 | 110 |
P value = 1 (Fisher's exact test), Q value = 1
Table S730. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MR1 MUTATED | 2 | 1 | 1 |
MR1 WILD-TYPE | 144 | 128 | 117 |
P value = 1 (Fisher's exact test), Q value = 1
Table S731. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MR1 MUTATED | 1 | 1 | 1 | 1 | 0 |
MR1 WILD-TYPE | 58 | 108 | 89 | 103 | 31 |
P value = 0.432 (Fisher's exact test), Q value = 1
Table S732. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MR1 MUTATED | 1 | 1 | 2 | 3 | 0 | 0 | 0 |
MR1 WILD-TYPE | 178 | 134 | 213 | 153 | 225 | 48 | 15 |
P value = 0.641 (Fisher's exact test), Q value = 1
Table S733. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MR1 MUTATED | 1 | 2 | 1 | 3 | 0 | 0 |
MR1 WILD-TYPE | 167 | 220 | 187 | 169 | 171 | 52 |
P value = 0.645 (Fisher's exact test), Q value = 1
Table S734. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MR1 MUTATED | 2 | 2 | 3 |
MR1 WILD-TYPE | 268 | 411 | 271 |
P value = 0.221 (Fisher's exact test), Q value = 1
Table S735. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MR1 MUTATED | 0 | 0 | 6 | 1 | 0 |
MR1 WILD-TYPE | 152 | 174 | 384 | 124 | 116 |
P value = 0.288 (Fisher's exact test), Q value = 1
Table S736. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MR1 MUTATED | 1 | 0 | 2 |
MR1 WILD-TYPE | 247 | 217 | 185 |
P value = 0.796 (Fisher's exact test), Q value = 1
Table S737. Gene #64: 'MR1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MR1 MUTATED | 1 | 0 | 2 | 0 | 0 | 0 |
MR1 WILD-TYPE | 114 | 63 | 187 | 117 | 108 | 60 |
P value = 0.904 (Fisher's exact test), Q value = 1
Table S738. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CABYR MUTATED | 2 | 2 | 0 | 2 | 0 |
CABYR WILD-TYPE | 365 | 224 | 91 | 239 | 37 |
P value = 0.34 (Fisher's exact test), Q value = 1
Table S739. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CABYR MUTATED | 2 | 0 | 2 | 0 | 1 |
CABYR WILD-TYPE | 114 | 181 | 155 | 83 | 110 |
P value = 0.0131 (Fisher's exact test), Q value = 1
Table S740. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CABYR MUTATED | 0 | 0 | 0 | 5 | 1 | 0 | 0 |
CABYR WILD-TYPE | 179 | 135 | 215 | 151 | 224 | 48 | 15 |
Figure S130. Get High-res Image Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D65V7.png)
P value = 0.00028 (Fisher's exact test), Q value = 0.44
Table S741. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CABYR MUTATED | 0 | 0 | 0 | 4 | 0 | 2 |
CABYR WILD-TYPE | 168 | 222 | 188 | 168 | 171 | 50 |
Figure S131. Get High-res Image Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D65V8.png)
P value = 0.525 (Fisher's exact test), Q value = 1
Table S742. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CABYR MUTATED | 0 | 3 | 2 |
CABYR WILD-TYPE | 270 | 410 | 272 |
P value = 0.227 (Fisher's exact test), Q value = 1
Table S743. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CABYR MUTATED | 0 | 0 | 3 | 0 | 2 |
CABYR WILD-TYPE | 152 | 174 | 387 | 125 | 114 |
P value = 0.0368 (Fisher's exact test), Q value = 1
Table S744. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CABYR MUTATED | 1 | 0 | 4 |
CABYR WILD-TYPE | 247 | 217 | 183 |
Figure S132. Get High-res Image Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D65V11.png)
P value = 0.0992 (Fisher's exact test), Q value = 1
Table S745. Gene #65: 'CABYR MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CABYR MUTATED | 0 | 0 | 3 | 0 | 0 | 2 |
CABYR WILD-TYPE | 115 | 63 | 186 | 117 | 108 | 58 |
P value = 0.141 (Fisher's exact test), Q value = 1
Table S746. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
AKT2 MUTATED | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 |
AKT2 WILD-TYPE | 21 | 38 | 114 | 97 | 106 | 73 | 18 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S747. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
AKT2 MUTATED | 1 | 1 | 1 | 0 | 0 |
AKT2 WILD-TYPE | 95 | 151 | 115 | 89 | 56 |
P value = 0.623 (Fisher's exact test), Q value = 1
Table S748. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
AKT2 MUTATED | 1 | 2 | 1 | 1 | 0 |
AKT2 WILD-TYPE | 366 | 224 | 90 | 240 | 37 |
P value = 0.243 (Fisher's exact test), Q value = 1
Table S749. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
AKT2 MUTATED | 0 | 1 | 1 | 2 | 0 |
AKT2 WILD-TYPE | 116 | 180 | 156 | 81 | 111 |
P value = 0.118 (Fisher's exact test), Q value = 1
Table S750. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
AKT2 MUTATED | 0 | 0 | 2 | 1 | 1 | 0 | 1 |
AKT2 WILD-TYPE | 179 | 135 | 213 | 155 | 224 | 48 | 14 |
P value = 0.216 (Fisher's exact test), Q value = 1
Table S751. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
AKT2 MUTATED | 0 | 0 | 1 | 3 | 1 | 0 |
AKT2 WILD-TYPE | 168 | 222 | 187 | 169 | 170 | 52 |
P value = 0.0661 (Fisher's exact test), Q value = 1
Table S752. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
AKT2 MUTATED | 0 | 5 | 0 |
AKT2 WILD-TYPE | 270 | 408 | 274 |
P value = 0.691 (Fisher's exact test), Q value = 1
Table S753. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
AKT2 MUTATED | 0 | 1 | 4 | 0 | 0 |
AKT2 WILD-TYPE | 152 | 173 | 386 | 125 | 116 |
P value = 0.291 (Fisher's exact test), Q value = 1
Table S754. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
AKT2 MUTATED | 1 | 0 | 2 |
AKT2 WILD-TYPE | 247 | 217 | 185 |
P value = 0.842 (Fisher's exact test), Q value = 1
Table S755. Gene #66: 'AKT2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
AKT2 MUTATED | 0 | 0 | 2 | 1 | 0 | 0 |
AKT2 WILD-TYPE | 115 | 63 | 187 | 116 | 108 | 60 |
P value = 0.46 (Fisher's exact test), Q value = 1
Table S756. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZBTB7C MUTATED | 2 | 1 | 1 | 0 | 0 |
ZBTB7C WILD-TYPE | 365 | 225 | 90 | 241 | 37 |
P value = 0.8 (Fisher's exact test), Q value = 1
Table S757. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZBTB7C MUTATED | 0 | 1 | 1 | 1 | 0 |
ZBTB7C WILD-TYPE | 116 | 180 | 156 | 82 | 111 |
P value = 0.88 (Fisher's exact test), Q value = 1
Table S758. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZBTB7C MUTATED | 0 | 1 | 1 | 1 | 2 | 0 | 0 |
ZBTB7C WILD-TYPE | 179 | 134 | 214 | 155 | 223 | 48 | 15 |
P value = 0.49 (Fisher's exact test), Q value = 1
Table S759. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZBTB7C MUTATED | 0 | 3 | 0 | 1 | 1 | 0 |
ZBTB7C WILD-TYPE | 168 | 219 | 188 | 171 | 170 | 52 |
P value = 0.741 (Fisher's exact test), Q value = 1
Table S760. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZBTB7C MUTATED | 2 | 2 | 1 |
ZBTB7C WILD-TYPE | 268 | 411 | 273 |
P value = 0.397 (Fisher's exact test), Q value = 1
Table S761. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZBTB7C MUTATED | 2 | 0 | 2 | 0 | 1 |
ZBTB7C WILD-TYPE | 150 | 174 | 388 | 125 | 115 |
P value = 0.779 (Fisher's exact test), Q value = 1
Table S762. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZBTB7C MUTATED | 2 | 1 | 0 |
ZBTB7C WILD-TYPE | 246 | 216 | 187 |
P value = 0.945 (Fisher's exact test), Q value = 1
Table S763. Gene #67: 'ZBTB7C MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZBTB7C MUTATED | 0 | 0 | 1 | 1 | 1 | 0 |
ZBTB7C WILD-TYPE | 115 | 63 | 188 | 116 | 107 | 60 |
P value = 0.591 (Fisher's exact test), Q value = 1
Table S764. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RIBC1 MUTATED | 0 | 1 | 1 | 0 | 2 | 0 | 0 | 0 |
RIBC1 WILD-TYPE | 21 | 37 | 113 | 97 | 106 | 73 | 19 | 39 |
P value = 0.379 (Fisher's exact test), Q value = 1
Table S765. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RIBC1 MUTATED | 1 | 3 | 0 | 0 | 0 |
RIBC1 WILD-TYPE | 95 | 149 | 116 | 89 | 56 |
P value = 0.461 (Fisher's exact test), Q value = 1
Table S766. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RIBC1 MUTATED | 2 | 1 | 1 | 0 | 0 |
RIBC1 WILD-TYPE | 365 | 225 | 90 | 241 | 37 |
P value = 0.0537 (Fisher's exact test), Q value = 1
Table S767. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RIBC1 MUTATED | 0 | 0 | 1 | 2 | 0 |
RIBC1 WILD-TYPE | 116 | 181 | 156 | 81 | 111 |
P value = 0.706 (Fisher's exact test), Q value = 1
Table S768. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RIBC1 MUTATED | 0 | 1 | 2 | 0 | 1 | 0 | 0 |
RIBC1 WILD-TYPE | 179 | 134 | 213 | 156 | 224 | 48 | 15 |
P value = 1 (Fisher's exact test), Q value = 1
Table S769. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RIBC1 MUTATED | 0 | 1 | 1 | 1 | 1 | 0 |
RIBC1 WILD-TYPE | 168 | 221 | 187 | 171 | 170 | 52 |
P value = 0.395 (Fisher's exact test), Q value = 1
Table S770. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RIBC1 MUTATED | 1 | 3 | 0 |
RIBC1 WILD-TYPE | 269 | 410 | 274 |
P value = 0.845 (Fisher's exact test), Q value = 1
Table S771. Gene #68: 'RIBC1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RIBC1 MUTATED | 0 | 1 | 2 | 0 | 1 |
RIBC1 WILD-TYPE | 152 | 173 | 388 | 125 | 115 |
P value = 0.374 (Fisher's exact test), Q value = 1
Table S772. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CEP57 MUTATED | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 |
CEP57 WILD-TYPE | 21 | 38 | 114 | 96 | 108 | 71 | 19 | 39 |
P value = 0.276 (Fisher's exact test), Q value = 1
Table S773. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CEP57 MUTATED | 0 | 0 | 2 | 1 | 0 |
CEP57 WILD-TYPE | 96 | 152 | 114 | 88 | 56 |
P value = 0.104 (Fisher's exact test), Q value = 1
Table S774. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CEP57 MUTATED | 1 | 0 | 2 | 3 | 0 |
CEP57 WILD-TYPE | 366 | 226 | 89 | 238 | 37 |
P value = 0.198 (Fisher's exact test), Q value = 1
Table S775. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CEP57 MUTATED | 0 | 1 | 1 | 0 | 3 |
CEP57 WILD-TYPE | 116 | 180 | 156 | 83 | 108 |
P value = 0.143 (Fisher's exact test), Q value = 1
Table S776. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CEP57 MUTATED | 1 | 0 | 1 | 3 | 0 | 1 | 0 |
CEP57 WILD-TYPE | 178 | 135 | 214 | 153 | 225 | 47 | 15 |
P value = 0.751 (Fisher's exact test), Q value = 1
Table S777. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CEP57 MUTATED | 1 | 1 | 2 | 2 | 0 | 0 |
CEP57 WILD-TYPE | 167 | 221 | 186 | 170 | 171 | 52 |
P value = 0.0675 (Fisher's exact test), Q value = 1
Table S778. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CEP57 MUTATED | 4 | 2 | 0 |
CEP57 WILD-TYPE | 266 | 411 | 274 |
P value = 0.517 (Fisher's exact test), Q value = 1
Table S779. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CEP57 MUTATED | 2 | 0 | 3 | 0 | 1 |
CEP57 WILD-TYPE | 150 | 174 | 387 | 125 | 115 |
P value = 0.0604 (Fisher's exact test), Q value = 1
Table S780. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CEP57 MUTATED | 0 | 3 | 0 |
CEP57 WILD-TYPE | 248 | 214 | 187 |
P value = 0.174 (Fisher's exact test), Q value = 1
Table S781. Gene #69: 'CEP57 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CEP57 MUTATED | 0 | 0 | 0 | 1 | 2 | 0 |
CEP57 WILD-TYPE | 115 | 63 | 189 | 116 | 106 | 60 |
P value = 0.662 (Fisher's exact test), Q value = 1
Table S782. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TARBP2 MUTATED | 0 | 1 | 1 | 2 | 0 | 1 | 0 | 0 |
TARBP2 WILD-TYPE | 21 | 37 | 113 | 95 | 108 | 72 | 19 | 39 |
P value = 0.959 (Fisher's exact test), Q value = 1
Table S783. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TARBP2 MUTATED | 1 | 1 | 2 | 1 | 0 |
TARBP2 WILD-TYPE | 95 | 151 | 114 | 88 | 56 |
P value = 0.107 (Fisher's exact test), Q value = 1
Table S784. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TARBP2 MUTATED | 0 | 2 | 0 | 4 | 0 |
TARBP2 WILD-TYPE | 367 | 224 | 91 | 237 | 37 |
P value = 0.649 (Fisher's exact test), Q value = 1
Table S785. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TARBP2 MUTATED | 1 | 0 | 1 | 0 | 1 |
TARBP2 WILD-TYPE | 115 | 181 | 156 | 83 | 110 |
P value = 0.167 (Fisher's exact test), Q value = 1
Table S786. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TARBP2 MUTATED | 4 | 1 | 0 |
TARBP2 WILD-TYPE | 142 | 128 | 118 |
P value = 0.273 (Fisher's exact test), Q value = 1
Table S787. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TARBP2 MUTATED | 1 | 0 | 3 | 1 | 0 |
TARBP2 WILD-TYPE | 58 | 109 | 87 | 103 | 31 |
P value = 0.508 (Fisher's exact test), Q value = 1
Table S788. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TARBP2 MUTATED | 2 | 0 | 0 | 2 | 2 | 0 | 0 |
TARBP2 WILD-TYPE | 177 | 135 | 215 | 154 | 223 | 48 | 15 |
P value = 0.438 (Fisher's exact test), Q value = 1
Table S789. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TARBP2 MUTATED | 2 | 1 | 0 | 1 | 1 | 1 |
TARBP2 WILD-TYPE | 166 | 221 | 188 | 171 | 170 | 51 |
P value = 0.134 (Fisher's exact test), Q value = 1
Table S790. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TARBP2 MUTATED | 1 | 1 | 4 |
TARBP2 WILD-TYPE | 269 | 412 | 270 |
P value = 0.32 (Fisher's exact test), Q value = 1
Table S791. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TARBP2 MUTATED | 1 | 1 | 1 | 1 | 2 |
TARBP2 WILD-TYPE | 151 | 173 | 389 | 124 | 114 |
P value = 0.196 (Fisher's exact test), Q value = 1
Table S792. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TARBP2 MUTATED | 0 | 1 | 2 |
TARBP2 WILD-TYPE | 248 | 216 | 185 |
P value = 0.0108 (Fisher's exact test), Q value = 1
Table S793. Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TARBP2 MUTATED | 0 | 0 | 0 | 0 | 1 | 2 |
TARBP2 WILD-TYPE | 115 | 63 | 189 | 117 | 107 | 58 |
Figure S133. Get High-res Image Gene #70: 'TARBP2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D70V12.png)
P value = 0.447 (Fisher's exact test), Q value = 1
Table S794. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
OXCT2 MUTATED | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 |
OXCT2 WILD-TYPE | 21 | 37 | 114 | 97 | 107 | 72 | 19 | 39 |
P value = 0.543 (Fisher's exact test), Q value = 1
Table S795. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
OXCT2 MUTATED | 0 | 1 | 1 | 0 | 1 |
OXCT2 WILD-TYPE | 96 | 151 | 115 | 89 | 55 |
P value = 0.829 (Fisher's exact test), Q value = 1
Table S796. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
OXCT2 MUTATED | 1 | 2 | 0 | 1 | 0 |
OXCT2 WILD-TYPE | 366 | 224 | 91 | 240 | 37 |
P value = 0.933 (Fisher's exact test), Q value = 1
Table S797. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
OXCT2 MUTATED | 0 | 1 | 1 | 1 | 1 | 0 | 0 |
OXCT2 WILD-TYPE | 179 | 134 | 214 | 155 | 224 | 48 | 15 |
P value = 0.373 (Fisher's exact test), Q value = 1
Table S798. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
OXCT2 MUTATED | 0 | 1 | 1 | 1 | 0 | 1 |
OXCT2 WILD-TYPE | 168 | 221 | 187 | 171 | 171 | 51 |
P value = 1 (Fisher's exact test), Q value = 1
Table S799. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
OXCT2 MUTATED | 1 | 2 | 1 |
OXCT2 WILD-TYPE | 269 | 411 | 273 |
P value = 0.297 (Fisher's exact test), Q value = 1
Table S800. Gene #71: 'OXCT2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
OXCT2 MUTATED | 0 | 2 | 1 | 0 | 1 |
OXCT2 WILD-TYPE | 152 | 172 | 389 | 125 | 115 |
P value = 0.192 (Fisher's exact test), Q value = 1
Table S801. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ANKRD20A4 MUTATED | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 |
ANKRD20A4 WILD-TYPE | 21 | 38 | 114 | 97 | 107 | 72 | 18 | 39 |
P value = 0.0963 (Fisher's exact test), Q value = 1
Table S802. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ANKRD20A4 MUTATED | 0 | 0 | 2 | 0 | 1 |
ANKRD20A4 WILD-TYPE | 96 | 152 | 114 | 89 | 55 |
P value = 0.802 (Fisher's exact test), Q value = 1
Table S803. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ANKRD20A4 MUTATED | 3 | 1 | 0 | 3 | 0 |
ANKRD20A4 WILD-TYPE | 364 | 225 | 91 | 238 | 37 |
P value = 0.877 (Fisher's exact test), Q value = 1
Table S804. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ANKRD20A4 MUTATED | 0 | 2 | 1 | 1 | 1 |
ANKRD20A4 WILD-TYPE | 116 | 179 | 156 | 82 | 110 |
P value = 0.779 (Fisher's exact test), Q value = 1
Table S805. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ANKRD20A4 MUTATED | 2 | 1 | 0 |
ANKRD20A4 WILD-TYPE | 144 | 128 | 118 |
P value = 0.656 (Fisher's exact test), Q value = 1
Table S806. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ANKRD20A4 MUTATED | 1 | 0 | 1 | 1 | 0 |
ANKRD20A4 WILD-TYPE | 58 | 109 | 89 | 103 | 31 |
P value = 0.0838 (Fisher's exact test), Q value = 1
Table S807. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ANKRD20A4 MUTATED | 0 | 2 | 1 | 3 | 0 | 1 | 0 |
ANKRD20A4 WILD-TYPE | 179 | 133 | 214 | 153 | 225 | 47 | 15 |
P value = 0.0794 (Fisher's exact test), Q value = 1
Table S808. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ANKRD20A4 MUTATED | 0 | 3 | 3 | 0 | 0 | 1 |
ANKRD20A4 WILD-TYPE | 168 | 219 | 185 | 172 | 171 | 51 |
P value = 1 (Fisher's exact test), Q value = 1
Table S809. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ANKRD20A4 MUTATED | 2 | 3 | 2 |
ANKRD20A4 WILD-TYPE | 268 | 410 | 272 |
P value = 0.61 (Fisher's exact test), Q value = 1
Table S810. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ANKRD20A4 MUTATED | 2 | 2 | 2 | 0 | 1 |
ANKRD20A4 WILD-TYPE | 150 | 172 | 388 | 125 | 115 |
P value = 0.636 (Fisher's exact test), Q value = 1
Table S811. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ANKRD20A4 MUTATED | 1 | 2 | 2 |
ANKRD20A4 WILD-TYPE | 247 | 215 | 185 |
P value = 0.513 (Fisher's exact test), Q value = 1
Table S812. Gene #72: 'ANKRD20A4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ANKRD20A4 MUTATED | 0 | 0 | 1 | 1 | 2 | 1 |
ANKRD20A4 WILD-TYPE | 115 | 63 | 188 | 116 | 106 | 59 |
P value = 0.552 (Fisher's exact test), Q value = 1
Table S813. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HIST1H3B MUTATED | 0 | 0 | 1 | 1 | 0 | 2 | 0 | 1 |
HIST1H3B WILD-TYPE | 21 | 38 | 113 | 96 | 108 | 71 | 19 | 38 |
P value = 0.958 (Fisher's exact test), Q value = 1
Table S814. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HIST1H3B MUTATED | 1 | 1 | 2 | 1 | 0 |
HIST1H3B WILD-TYPE | 95 | 151 | 114 | 88 | 56 |
P value = 0.661 (Fisher's exact test), Q value = 1
Table S815. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HIST1H3B MUTATED | 3 | 3 | 1 | 3 | 1 |
HIST1H3B WILD-TYPE | 364 | 223 | 90 | 238 | 36 |
P value = 0.663 (Fisher's exact test), Q value = 1
Table S816. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HIST1H3B MUTATED | 2 | 2 | 4 | 0 | 1 |
HIST1H3B WILD-TYPE | 114 | 179 | 153 | 83 | 110 |
P value = 0.632 (Fisher's exact test), Q value = 1
Table S817. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
HIST1H3B MUTATED | 3 | 1 | 1 |
HIST1H3B WILD-TYPE | 143 | 128 | 117 |
P value = 0.659 (Fisher's exact test), Q value = 1
Table S818. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
HIST1H3B MUTATED | 0 | 2 | 1 | 1 | 1 |
HIST1H3B WILD-TYPE | 59 | 107 | 89 | 103 | 30 |
P value = 0.254 (Fisher's exact test), Q value = 1
Table S819. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HIST1H3B MUTATED | 2 | 1 | 0 | 4 | 3 | 1 | 0 |
HIST1H3B WILD-TYPE | 177 | 134 | 215 | 152 | 222 | 47 | 15 |
P value = 0.429 (Fisher's exact test), Q value = 1
Table S820. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HIST1H3B MUTATED | 2 | 2 | 1 | 5 | 1 | 0 |
HIST1H3B WILD-TYPE | 166 | 220 | 187 | 167 | 170 | 52 |
P value = 0.807 (Fisher's exact test), Q value = 1
Table S821. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HIST1H3B MUTATED | 2 | 6 | 3 |
HIST1H3B WILD-TYPE | 268 | 407 | 271 |
P value = 0.549 (Fisher's exact test), Q value = 1
Table S822. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HIST1H3B MUTATED | 1 | 1 | 7 | 2 | 0 |
HIST1H3B WILD-TYPE | 151 | 173 | 383 | 123 | 116 |
P value = 0.88 (Fisher's exact test), Q value = 1
Table S823. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HIST1H3B MUTATED | 3 | 2 | 1 |
HIST1H3B WILD-TYPE | 245 | 215 | 186 |
P value = 0.954 (Fisher's exact test), Q value = 1
Table S824. Gene #73: 'HIST1H3B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HIST1H3B MUTATED | 1 | 0 | 2 | 2 | 1 | 0 |
HIST1H3B WILD-TYPE | 114 | 63 | 187 | 115 | 107 | 60 |
P value = 0.0975 (Fisher's exact test), Q value = 1
Table S825. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MED23 MUTATED | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 3 |
MED23 WILD-TYPE | 21 | 37 | 113 | 97 | 107 | 72 | 19 | 36 |
P value = 0.284 (Fisher's exact test), Q value = 1
Table S826. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MED23 MUTATED | 1 | 5 | 1 | 0 | 0 |
MED23 WILD-TYPE | 95 | 147 | 115 | 89 | 56 |
P value = 0.183 (Fisher's exact test), Q value = 1
Table S827. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MED23 MUTATED | 10 | 2 | 1 | 1 | 0 |
MED23 WILD-TYPE | 357 | 224 | 90 | 240 | 37 |
P value = 0.0421 (Fisher's exact test), Q value = 1
Table S828. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MED23 MUTATED | 0 | 4 | 2 | 4 | 0 |
MED23 WILD-TYPE | 116 | 177 | 155 | 79 | 111 |
Figure S134. Get High-res Image Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D74V4.png)
P value = 0.155 (Fisher's exact test), Q value = 1
Table S829. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MED23 MUTATED | 0 | 3 | 1 |
MED23 WILD-TYPE | 146 | 126 | 117 |
P value = 0.677 (Fisher's exact test), Q value = 1
Table S830. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MED23 MUTATED | 0 | 2 | 0 | 2 | 0 |
MED23 WILD-TYPE | 59 | 107 | 90 | 102 | 31 |
P value = 0.138 (Fisher's exact test), Q value = 1
Table S831. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MED23 MUTATED | 0 | 4 | 3 | 1 | 4 | 2 | 0 |
MED23 WILD-TYPE | 179 | 131 | 212 | 155 | 221 | 46 | 15 |
P value = 0.00209 (Fisher's exact test), Q value = 1
Table S832. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MED23 MUTATED | 0 | 9 | 0 | 1 | 4 | 0 |
MED23 WILD-TYPE | 168 | 213 | 188 | 171 | 167 | 52 |
Figure S135. Get High-res Image Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D74V8.png)
P value = 0.0429 (Fisher's exact test), Q value = 1
Table S833. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MED23 MUTATED | 8 | 5 | 1 |
MED23 WILD-TYPE | 262 | 408 | 273 |
Figure S136. Get High-res Image Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D74V9.png)
P value = 0.201 (Fisher's exact test), Q value = 1
Table S834. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MED23 MUTATED | 4 | 4 | 6 | 0 | 0 |
MED23 WILD-TYPE | 148 | 170 | 384 | 125 | 116 |
P value = 0.12 (Fisher's exact test), Q value = 1
Table S835. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MED23 MUTATED | 5 | 4 | 0 |
MED23 WILD-TYPE | 243 | 213 | 187 |
P value = 0.547 (Fisher's exact test), Q value = 1
Table S836. Gene #74: 'MED23 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MED23 MUTATED | 0 | 1 | 3 | 2 | 3 | 0 |
MED23 WILD-TYPE | 115 | 62 | 186 | 115 | 105 | 60 |
P value = 0.0203 (Fisher's exact test), Q value = 1
Table S837. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MUC6 MUTATED | 2 | 2 | 0 | 3 | 1 | 0 | 0 | 1 |
MUC6 WILD-TYPE | 19 | 36 | 114 | 94 | 107 | 73 | 19 | 38 |
Figure S137. Get High-res Image Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D75V1.png)
P value = 0.608 (Fisher's exact test), Q value = 1
Table S838. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MUC6 MUTATED | 0 | 3 | 3 | 2 | 1 |
MUC6 WILD-TYPE | 96 | 149 | 113 | 87 | 55 |
P value = 0.5 (Fisher's exact test), Q value = 1
Table S839. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MUC6 MUTATED | 4 | 4 | 0 | 6 | 0 |
MUC6 WILD-TYPE | 363 | 222 | 91 | 235 | 37 |
P value = 0.168 (Fisher's exact test), Q value = 1
Table S840. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MUC6 MUTATED | 3 | 0 | 3 | 2 | 2 |
MUC6 WILD-TYPE | 113 | 181 | 154 | 81 | 109 |
P value = 0.366 (Fisher's exact test), Q value = 1
Table S841. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MUC6 MUTATED | 4 | 1 | 4 |
MUC6 WILD-TYPE | 142 | 128 | 114 |
P value = 0.984 (Fisher's exact test), Q value = 1
Table S842. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MUC6 MUTATED | 1 | 3 | 2 | 2 | 1 |
MUC6 WILD-TYPE | 58 | 106 | 88 | 102 | 30 |
P value = 0.0597 (Fisher's exact test), Q value = 1
Table S843. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MUC6 MUTATED | 6 | 1 | 2 | 4 | 0 | 1 | 0 |
MUC6 WILD-TYPE | 173 | 134 | 213 | 152 | 225 | 47 | 15 |
P value = 0.253 (Fisher's exact test), Q value = 1
Table S844. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MUC6 MUTATED | 5 | 3 | 2 | 3 | 0 | 1 |
MUC6 WILD-TYPE | 163 | 219 | 186 | 169 | 171 | 51 |
P value = 0.167 (Fisher's exact test), Q value = 1
Table S845. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MUC6 MUTATED | 1 | 7 | 6 |
MUC6 WILD-TYPE | 269 | 406 | 268 |
P value = 0.0456 (Fisher's exact test), Q value = 1
Table S846. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MUC6 MUTATED | 0 | 2 | 7 | 5 | 0 |
MUC6 WILD-TYPE | 152 | 172 | 383 | 120 | 116 |
Figure S138. Get High-res Image Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D75V10.png)
P value = 0.191 (Fisher's exact test), Q value = 1
Table S847. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MUC6 MUTATED | 3 | 0 | 3 |
MUC6 WILD-TYPE | 245 | 217 | 184 |
P value = 0.249 (Fisher's exact test), Q value = 1
Table S848. Gene #75: 'MUC6 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MUC6 MUTATED | 3 | 0 | 2 | 0 | 0 | 1 |
MUC6 WILD-TYPE | 112 | 63 | 187 | 117 | 108 | 59 |
P value = 0.69 (Fisher's exact test), Q value = 1
Table S849. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PSIP1 MUTATED | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 1 |
PSIP1 WILD-TYPE | 21 | 38 | 114 | 96 | 107 | 72 | 19 | 38 |
P value = 0.717 (Fisher's exact test), Q value = 1
Table S850. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PSIP1 MUTATED | 0 | 1 | 1 | 1 | 1 |
PSIP1 WILD-TYPE | 96 | 151 | 115 | 88 | 55 |
P value = 0.475 (Fisher's exact test), Q value = 1
Table S851. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PSIP1 MUTATED | 4 | 1 | 2 | 1 | 0 |
PSIP1 WILD-TYPE | 363 | 225 | 89 | 240 | 37 |
P value = 0.875 (Fisher's exact test), Q value = 1
Table S852. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PSIP1 MUTATED | 0 | 2 | 1 | 1 | 1 |
PSIP1 WILD-TYPE | 116 | 179 | 156 | 82 | 110 |
P value = 0.691 (Fisher's exact test), Q value = 1
Table S853. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PSIP1 MUTATED | 1 | 1 | 2 |
PSIP1 WILD-TYPE | 145 | 128 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S854. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PSIP1 MUTATED | 1 | 1 | 1 | 1 | 0 |
PSIP1 WILD-TYPE | 58 | 108 | 89 | 103 | 31 |
P value = 0.544 (Fisher's exact test), Q value = 1
Table S855. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PSIP1 MUTATED | 1 | 0 | 3 | 2 | 1 | 1 | 0 |
PSIP1 WILD-TYPE | 178 | 135 | 212 | 154 | 224 | 47 | 15 |
P value = 0.828 (Fisher's exact test), Q value = 1
Table S856. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PSIP1 MUTATED | 1 | 1 | 2 | 3 | 1 | 0 |
PSIP1 WILD-TYPE | 167 | 221 | 186 | 169 | 170 | 52 |
P value = 0.191 (Fisher's exact test), Q value = 1
Table S857. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PSIP1 MUTATED | 2 | 5 | 0 |
PSIP1 WILD-TYPE | 268 | 408 | 274 |
P value = 0.91 (Fisher's exact test), Q value = 1
Table S858. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PSIP1 MUTATED | 1 | 2 | 3 | 0 | 1 |
PSIP1 WILD-TYPE | 151 | 172 | 387 | 125 | 115 |
P value = 1 (Fisher's exact test), Q value = 1
Table S859. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PSIP1 MUTATED | 2 | 1 | 1 |
PSIP1 WILD-TYPE | 246 | 216 | 186 |
P value = 0.296 (Fisher's exact test), Q value = 1
Table S860. Gene #76: 'PSIP1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PSIP1 MUTATED | 0 | 1 | 2 | 0 | 0 | 1 |
PSIP1 WILD-TYPE | 115 | 62 | 187 | 117 | 108 | 59 |
P value = 0.954 (Fisher's exact test), Q value = 1
Table S861. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PCNXL2 MUTATED | 0 | 1 | 5 | 2 | 3 | 2 | 0 | 0 |
PCNXL2 WILD-TYPE | 21 | 37 | 109 | 95 | 105 | 71 | 19 | 39 |
P value = 0.937 (Fisher's exact test), Q value = 1
Table S862. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PCNXL2 MUTATED | 3 | 3 | 3 | 2 | 2 |
PCNXL2 WILD-TYPE | 93 | 149 | 113 | 87 | 54 |
P value = 0.623 (Fisher's exact test), Q value = 1
Table S863. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PCNXL2 MUTATED | 6 | 4 | 3 | 7 | 1 |
PCNXL2 WILD-TYPE | 361 | 222 | 88 | 234 | 36 |
P value = 0.909 (Fisher's exact test), Q value = 1
Table S864. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PCNXL2 MUTATED | 3 | 4 | 4 | 2 | 1 |
PCNXL2 WILD-TYPE | 113 | 177 | 153 | 81 | 110 |
P value = 0.483 (Fisher's exact test), Q value = 1
Table S865. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PCNXL2 MUTATED | 4 | 4 | 1 |
PCNXL2 WILD-TYPE | 142 | 125 | 117 |
P value = 0.323 (Fisher's exact test), Q value = 1
Table S866. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PCNXL2 MUTATED | 1 | 1 | 1 | 5 | 1 |
PCNXL2 WILD-TYPE | 58 | 108 | 89 | 99 | 30 |
P value = 0.936 (Fisher's exact test), Q value = 1
Table S867. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PCNXL2 MUTATED | 4 | 2 | 5 | 3 | 7 | 0 | 0 |
PCNXL2 WILD-TYPE | 175 | 133 | 210 | 153 | 218 | 48 | 15 |
P value = 0.338 (Fisher's exact test), Q value = 1
Table S868. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PCNXL2 MUTATED | 4 | 2 | 5 | 7 | 3 | 0 |
PCNXL2 WILD-TYPE | 164 | 220 | 183 | 165 | 168 | 52 |
P value = 0.644 (Fisher's exact test), Q value = 1
Table S869. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PCNXL2 MUTATED | 4 | 11 | 6 |
PCNXL2 WILD-TYPE | 266 | 402 | 268 |
P value = 0.771 (Fisher's exact test), Q value = 1
Table S870. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PCNXL2 MUTATED | 2 | 6 | 9 | 2 | 2 |
PCNXL2 WILD-TYPE | 150 | 168 | 381 | 123 | 114 |
P value = 0.666 (Fisher's exact test), Q value = 1
Table S871. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PCNXL2 MUTATED | 5 | 2 | 3 |
PCNXL2 WILD-TYPE | 243 | 215 | 184 |
P value = 0.516 (Fisher's exact test), Q value = 1
Table S872. Gene #77: 'PCNXL2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PCNXL2 MUTATED | 3 | 1 | 4 | 0 | 2 | 0 |
PCNXL2 WILD-TYPE | 112 | 62 | 185 | 117 | 106 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
Table S873. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SLC35B2 MUTATED | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 |
SLC35B2 WILD-TYPE | 21 | 38 | 113 | 96 | 107 | 72 | 19 | 39 |
P value = 0.245 (Fisher's exact test), Q value = 1
Table S874. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SLC35B2 MUTATED | 1 | 0 | 2 | 0 | 1 |
SLC35B2 WILD-TYPE | 95 | 152 | 114 | 89 | 55 |
P value = 0.96 (Fisher's exact test), Q value = 1
Table S875. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SLC35B2 MUTATED | 3 | 1 | 1 | 2 | 0 |
SLC35B2 WILD-TYPE | 364 | 225 | 90 | 239 | 37 |
P value = 0.558 (Fisher's exact test), Q value = 1
Table S876. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SLC35B2 MUTATED | 2 | 2 | 0 |
SLC35B2 WILD-TYPE | 144 | 127 | 118 |
P value = 0.557 (Fisher's exact test), Q value = 1
Table S877. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SLC35B2 MUTATED | 1 | 0 | 2 | 1 | 0 |
SLC35B2 WILD-TYPE | 58 | 109 | 88 | 103 | 31 |
P value = 0.965 (Fisher's exact test), Q value = 1
Table S878. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SLC35B2 MUTATED | 1 | 1 | 1 | 2 | 2 | 0 | 0 |
SLC35B2 WILD-TYPE | 178 | 134 | 214 | 154 | 223 | 48 | 15 |
P value = 0.829 (Fisher's exact test), Q value = 1
Table S879. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SLC35B2 MUTATED | 1 | 1 | 2 | 1 | 1 | 1 |
SLC35B2 WILD-TYPE | 167 | 221 | 186 | 171 | 170 | 51 |
P value = 0.718 (Fisher's exact test), Q value = 1
Table S880. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SLC35B2 MUTATED | 1 | 3 | 3 |
SLC35B2 WILD-TYPE | 269 | 410 | 271 |
P value = 0.664 (Fisher's exact test), Q value = 1
Table S881. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SLC35B2 MUTATED | 0 | 2 | 4 | 0 | 1 |
SLC35B2 WILD-TYPE | 152 | 172 | 386 | 125 | 115 |
P value = 0.862 (Fisher's exact test), Q value = 1
Table S882. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SLC35B2 MUTATED | 2 | 1 | 2 |
SLC35B2 WILD-TYPE | 246 | 216 | 185 |
P value = 0.759 (Fisher's exact test), Q value = 1
Table S883. Gene #78: 'SLC35B2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SLC35B2 MUTATED | 0 | 0 | 2 | 1 | 1 | 1 |
SLC35B2 WILD-TYPE | 115 | 63 | 187 | 116 | 107 | 59 |
P value = 0.202 (Fisher's exact test), Q value = 1
Table S884. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ANGPT4 MUTATED | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 |
ANGPT4 WILD-TYPE | 21 | 37 | 113 | 96 | 108 | 73 | 18 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S885. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ANGPT4 MUTATED | 1 | 1 | 1 | 1 | 0 |
ANGPT4 WILD-TYPE | 95 | 151 | 115 | 88 | 56 |
P value = 0.26 (Fisher's exact test), Q value = 1
Table S886. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ANGPT4 MUTATED | 2 | 2 | 3 | 3 | 0 |
ANGPT4 WILD-TYPE | 365 | 224 | 88 | 238 | 37 |
P value = 0.135 (Fisher's exact test), Q value = 1
Table S887. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ANGPT4 MUTATED | 0 | 0 | 3 | 1 | 2 |
ANGPT4 WILD-TYPE | 116 | 181 | 154 | 82 | 109 |
P value = 0.517 (Fisher's exact test), Q value = 1
Table S888. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ANGPT4 MUTATED | 1 | 2 | 0 |
ANGPT4 WILD-TYPE | 145 | 127 | 118 |
P value = 0.548 (Fisher's exact test), Q value = 1
Table S889. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ANGPT4 MUTATED | 0 | 0 | 1 | 2 | 0 |
ANGPT4 WILD-TYPE | 59 | 109 | 89 | 102 | 31 |
P value = 0.00774 (Fisher's exact test), Q value = 1
Table S890. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ANGPT4 MUTATED | 1 | 1 | 0 | 7 | 1 | 0 | 0 |
ANGPT4 WILD-TYPE | 178 | 134 | 215 | 149 | 224 | 48 | 15 |
Figure S139. Get High-res Image Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D79V7.png)
P value = 0.0742 (Fisher's exact test), Q value = 1
Table S891. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ANGPT4 MUTATED | 1 | 2 | 0 | 4 | 1 | 2 |
ANGPT4 WILD-TYPE | 167 | 220 | 188 | 168 | 170 | 50 |
P value = 0.191 (Fisher's exact test), Q value = 1
Table S892. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ANGPT4 MUTATED | 3 | 2 | 5 |
ANGPT4 WILD-TYPE | 267 | 411 | 269 |
P value = 0.378 (Fisher's exact test), Q value = 1
Table S893. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ANGPT4 MUTATED | 1 | 1 | 5 | 0 | 3 |
ANGPT4 WILD-TYPE | 151 | 173 | 385 | 125 | 113 |
P value = 0.719 (Fisher's exact test), Q value = 1
Table S894. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ANGPT4 MUTATED | 2 | 2 | 3 |
ANGPT4 WILD-TYPE | 246 | 215 | 184 |
P value = 0.387 (Fisher's exact test), Q value = 1
Table S895. Gene #79: 'ANGPT4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ANGPT4 MUTATED | 0 | 0 | 3 | 1 | 1 | 2 |
ANGPT4 WILD-TYPE | 115 | 63 | 186 | 116 | 107 | 58 |
P value = 0.901 (Fisher's exact test), Q value = 1
Table S896. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MKL1 MUTATED | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 |
MKL1 WILD-TYPE | 21 | 38 | 112 | 97 | 107 | 72 | 19 | 39 |
P value = 0.685 (Fisher's exact test), Q value = 1
Table S897. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MKL1 MUTATED | 2 | 1 | 1 | 0 | 0 |
MKL1 WILD-TYPE | 94 | 151 | 115 | 89 | 56 |
P value = 0.347 (Fisher's exact test), Q value = 1
Table S898. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MKL1 MUTATED | 2 | 3 | 0 | 0 | 0 |
MKL1 WILD-TYPE | 365 | 223 | 91 | 241 | 37 |
P value = 0.779 (Fisher's exact test), Q value = 1
Table S899. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MKL1 MUTATED | 2 | 1 | 0 |
MKL1 WILD-TYPE | 144 | 128 | 118 |
P value = 0.0991 (Fisher's exact test), Q value = 1
Table S900. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MKL1 MUTATED | 0 | 0 | 0 | 2 | 1 |
MKL1 WILD-TYPE | 59 | 109 | 90 | 102 | 30 |
P value = 0.652 (Fisher's exact test), Q value = 1
Table S901. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MKL1 MUTATED | 0 | 0 | 1 | 2 | 2 | 0 | 0 |
MKL1 WILD-TYPE | 179 | 135 | 214 | 154 | 223 | 48 | 15 |
P value = 0.0645 (Fisher's exact test), Q value = 1
Table S902. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MKL1 MUTATED | 0 | 0 | 0 | 2 | 2 | 1 |
MKL1 WILD-TYPE | 168 | 222 | 188 | 170 | 169 | 51 |
P value = 0.526 (Fisher's exact test), Q value = 1
Table S903. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MKL1 MUTATED | 0 | 3 | 2 |
MKL1 WILD-TYPE | 270 | 410 | 272 |
P value = 0.856 (Fisher's exact test), Q value = 1
Table S904. Gene #80: 'MKL1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MKL1 MUTATED | 0 | 1 | 3 | 0 | 1 |
MKL1 WILD-TYPE | 152 | 173 | 387 | 125 | 115 |
P value = 0.618 (Fisher's exact test), Q value = 1
Table S905. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
NBPF9 MUTATED | 1 | 0 | 1 | 1 | 2 | 0 | 0 | 0 |
NBPF9 WILD-TYPE | 20 | 38 | 113 | 96 | 106 | 73 | 19 | 39 |
P value = 0.622 (Fisher's exact test), Q value = 1
Table S906. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
NBPF9 MUTATED | 0 | 1 | 2 | 1 | 1 |
NBPF9 WILD-TYPE | 96 | 151 | 114 | 88 | 55 |
P value = 0.809 (Fisher's exact test), Q value = 1
Table S907. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
NBPF9 MUTATED | 2 | 1 | 1 | 1 | 0 |
NBPF9 WILD-TYPE | 365 | 225 | 90 | 240 | 37 |
P value = 0.864 (Fisher's exact test), Q value = 1
Table S908. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
NBPF9 MUTATED | 2 | 1 | 2 |
NBPF9 WILD-TYPE | 144 | 128 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S909. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
NBPF9 MUTATED | 1 | 2 | 1 | 1 | 0 |
NBPF9 WILD-TYPE | 58 | 107 | 89 | 103 | 31 |
P value = 0.674 (Fisher's exact test), Q value = 1
Table S910. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
NBPF9 MUTATED | 1 | 0 | 3 | 0 | 1 | 0 | 0 |
NBPF9 WILD-TYPE | 178 | 135 | 212 | 156 | 224 | 48 | 15 |
P value = 0.198 (Fisher's exact test), Q value = 1
Table S911. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
NBPF9 MUTATED | 1 | 0 | 1 | 3 | 0 | 0 |
NBPF9 WILD-TYPE | 167 | 222 | 187 | 169 | 171 | 52 |
P value = 0.526 (Fisher's exact test), Q value = 1
Table S912. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
NBPF9 MUTATED | 0 | 3 | 2 |
NBPF9 WILD-TYPE | 270 | 410 | 272 |
P value = 0.341 (Fisher's exact test), Q value = 1
Table S913. Gene #81: 'NBPF9 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
NBPF9 MUTATED | 0 | 1 | 2 | 0 | 2 |
NBPF9 WILD-TYPE | 152 | 173 | 388 | 125 | 114 |
P value = 0.261 (Fisher's exact test), Q value = 1
Table S914. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PRICKLE3 MUTATED | 1 | 0 | 0 | 3 | 1 | 2 | 0 | 0 |
PRICKLE3 WILD-TYPE | 20 | 38 | 114 | 94 | 107 | 71 | 19 | 39 |
P value = 0.0269 (Fisher's exact test), Q value = 1
Table S915. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PRICKLE3 MUTATED | 0 | 0 | 2 | 3 | 2 |
PRICKLE3 WILD-TYPE | 96 | 152 | 114 | 86 | 54 |
Figure S140. Get High-res Image Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D82V2.png)
P value = 1 (Fisher's exact test), Q value = 1
Table S916. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PRICKLE3 MUTATED | 4 | 2 | 1 | 3 | 0 |
PRICKLE3 WILD-TYPE | 363 | 224 | 90 | 238 | 37 |
P value = 0.0472 (Fisher's exact test), Q value = 1
Table S917. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PRICKLE3 MUTATED | 0 | 1 | 1 | 3 | 0 |
PRICKLE3 WILD-TYPE | 116 | 180 | 156 | 80 | 111 |
Figure S141. Get High-res Image Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D82V4.png)
P value = 0.511 (Fisher's exact test), Q value = 1
Table S918. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PRICKLE3 MUTATED | 4 | 1 | 2 |
PRICKLE3 WILD-TYPE | 142 | 128 | 116 |
P value = 0.588 (Fisher's exact test), Q value = 1
Table S919. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PRICKLE3 MUTATED | 0 | 3 | 2 | 1 | 1 |
PRICKLE3 WILD-TYPE | 59 | 106 | 88 | 103 | 30 |
P value = 0.3 (Fisher's exact test), Q value = 1
Table S920. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PRICKLE3 MUTATED | 3 | 0 | 2 | 4 | 1 | 1 | 0 |
PRICKLE3 WILD-TYPE | 176 | 135 | 213 | 152 | 224 | 47 | 15 |
P value = 0.34 (Fisher's exact test), Q value = 1
Table S921. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PRICKLE3 MUTATED | 3 | 1 | 1 | 4 | 1 | 1 |
PRICKLE3 WILD-TYPE | 165 | 221 | 187 | 168 | 170 | 51 |
P value = 0.803 (Fisher's exact test), Q value = 1
Table S922. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PRICKLE3 MUTATED | 2 | 6 | 3 |
PRICKLE3 WILD-TYPE | 268 | 407 | 271 |
P value = 0.553 (Fisher's exact test), Q value = 1
Table S923. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PRICKLE3 MUTATED | 1 | 1 | 4 | 3 | 2 |
PRICKLE3 WILD-TYPE | 151 | 173 | 386 | 122 | 114 |
P value = 0.521 (Fisher's exact test), Q value = 1
Table S924. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PRICKLE3 MUTATED | 2 | 1 | 3 |
PRICKLE3 WILD-TYPE | 246 | 216 | 184 |
P value = 0.119 (Fisher's exact test), Q value = 1
Table S925. Gene #82: 'PRICKLE3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PRICKLE3 MUTATED | 2 | 0 | 0 | 1 | 1 | 2 |
PRICKLE3 WILD-TYPE | 113 | 63 | 189 | 116 | 107 | 58 |
P value = 0.46 (Fisher's exact test), Q value = 1
Table S926. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CCDC82 MUTATED | 0 | 0 | 3 | 0 | 0 | 1 | 0 | 0 |
CCDC82 WILD-TYPE | 21 | 38 | 111 | 97 | 108 | 72 | 19 | 39 |
P value = 0.0582 (Fisher's exact test), Q value = 1
Table S927. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CCDC82 MUTATED | 3 | 0 | 1 | 0 | 0 |
CCDC82 WILD-TYPE | 93 | 152 | 115 | 89 | 56 |
P value = 0.713 (Fisher's exact test), Q value = 1
Table S928. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CCDC82 MUTATED | 2 | 1 | 0 | 3 | 0 |
CCDC82 WILD-TYPE | 365 | 225 | 91 | 238 | 37 |
P value = 0.0383 (Fisher's exact test), Q value = 1
Table S929. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CCDC82 MUTATED | 4 | 0 | 0 |
CCDC82 WILD-TYPE | 142 | 129 | 118 |
Figure S142. Get High-res Image Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D83V5.png)
P value = 0.273 (Fisher's exact test), Q value = 1
Table S930. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CCDC82 MUTATED | 0 | 0 | 1 | 3 | 0 |
CCDC82 WILD-TYPE | 59 | 109 | 89 | 101 | 31 |
P value = 0.335 (Fisher's exact test), Q value = 1
Table S931. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CCDC82 MUTATED | 1 | 0 | 0 | 1 | 4 | 0 | 0 |
CCDC82 WILD-TYPE | 178 | 135 | 215 | 155 | 221 | 48 | 15 |
P value = 0.00539 (Fisher's exact test), Q value = 1
Table S932. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CCDC82 MUTATED | 1 | 0 | 0 | 5 | 0 | 0 |
CCDC82 WILD-TYPE | 167 | 222 | 188 | 167 | 171 | 52 |
Figure S143. Get High-res Image Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D83V8.png)
P value = 0.341 (Fisher's exact test), Q value = 1
Table S933. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CCDC82 MUTATED | 0 | 4 | 2 |
CCDC82 WILD-TYPE | 270 | 409 | 272 |
P value = 0.345 (Fisher's exact test), Q value = 1
Table S934. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CCDC82 MUTATED | 0 | 0 | 5 | 1 | 0 |
CCDC82 WILD-TYPE | 152 | 174 | 385 | 124 | 116 |
P value = 0.107 (Fisher's exact test), Q value = 1
Table S935. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CCDC82 MUTATED | 1 | 0 | 3 |
CCDC82 WILD-TYPE | 247 | 217 | 184 |
P value = 0.962 (Fisher's exact test), Q value = 1
Table S936. Gene #83: 'CCDC82 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CCDC82 MUTATED | 1 | 0 | 2 | 1 | 0 | 0 |
CCDC82 WILD-TYPE | 114 | 63 | 187 | 116 | 108 | 60 |
P value = 0.604 (Fisher's exact test), Q value = 1
Table S937. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CXCR3 MUTATED | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 |
CXCR3 WILD-TYPE | 21 | 38 | 113 | 96 | 108 | 73 | 19 | 38 |
P value = 0.791 (Fisher's exact test), Q value = 1
Table S938. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CXCR3 MUTATED | 1 | 1 | 0 | 1 | 0 |
CXCR3 WILD-TYPE | 95 | 151 | 116 | 88 | 56 |
P value = 0.181 (Fisher's exact test), Q value = 1
Table S939. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CXCR3 MUTATED | 3 | 0 | 1 | 1 | 1 |
CXCR3 WILD-TYPE | 364 | 226 | 90 | 240 | 36 |
P value = 0.801 (Fisher's exact test), Q value = 1
Table S940. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CXCR3 MUTATED | 0 | 1 | 1 | 1 | 0 |
CXCR3 WILD-TYPE | 116 | 180 | 156 | 82 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S941. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CXCR3 MUTATED | 1 | 1 | 1 |
CXCR3 WILD-TYPE | 145 | 128 | 117 |
P value = 1 (Fisher's exact test), Q value = 1
Table S942. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CXCR3 MUTATED | 0 | 1 | 1 | 1 | 0 |
CXCR3 WILD-TYPE | 59 | 108 | 89 | 103 | 31 |
P value = 0.765 (Fisher's exact test), Q value = 1
Table S943. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CXCR3 MUTATED | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
CXCR3 WILD-TYPE | 178 | 134 | 214 | 155 | 224 | 47 | 15 |
P value = 0.618 (Fisher's exact test), Q value = 1
Table S944. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CXCR3 MUTATED | 1 | 2 | 1 | 0 | 1 | 1 |
CXCR3 WILD-TYPE | 167 | 220 | 187 | 172 | 170 | 51 |
P value = 0.774 (Fisher's exact test), Q value = 1
Table S945. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CXCR3 MUTATED | 2 | 2 | 2 |
CXCR3 WILD-TYPE | 268 | 411 | 272 |
P value = 0.582 (Fisher's exact test), Q value = 1
Table S946. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CXCR3 MUTATED | 2 | 0 | 3 | 1 | 0 |
CXCR3 WILD-TYPE | 150 | 174 | 387 | 124 | 116 |
P value = 0.833 (Fisher's exact test), Q value = 1
Table S947. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CXCR3 MUTATED | 1 | 2 | 1 |
CXCR3 WILD-TYPE | 247 | 215 | 186 |
P value = 0.213 (Fisher's exact test), Q value = 1
Table S948. Gene #84: 'CXCR3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CXCR3 MUTATED | 0 | 1 | 0 | 2 | 1 | 0 |
CXCR3 WILD-TYPE | 115 | 62 | 189 | 115 | 107 | 60 |
P value = 0.0876 (Fisher's exact test), Q value = 1
Table S949. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TPP2 MUTATED | 1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
TPP2 WILD-TYPE | 20 | 38 | 114 | 97 | 105 | 73 | 19 | 39 |
P value = 0.946 (Fisher's exact test), Q value = 1
Table S950. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TPP2 MUTATED | 1 | 2 | 1 | 0 | 0 |
TPP2 WILD-TYPE | 95 | 150 | 115 | 89 | 56 |
P value = 0.912 (Fisher's exact test), Q value = 1
Table S951. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TPP2 MUTATED | 3 | 3 | 0 | 2 | 0 |
TPP2 WILD-TYPE | 364 | 223 | 91 | 239 | 37 |
P value = 0.675 (Fisher's exact test), Q value = 1
Table S952. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TPP2 MUTATED | 2 | 2 | 1 | 0 | 0 |
TPP2 WILD-TYPE | 114 | 179 | 156 | 83 | 111 |
P value = 0.626 (Fisher's exact test), Q value = 1
Table S953. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TPP2 MUTATED | 2 | 0 | 4 | 1 | 1 | 0 | 0 |
TPP2 WILD-TYPE | 177 | 135 | 211 | 155 | 224 | 48 | 15 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S954. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TPP2 MUTATED | 2 | 0 | 1 | 3 | 2 | 0 |
TPP2 WILD-TYPE | 166 | 222 | 187 | 169 | 169 | 52 |
P value = 0.608 (Fisher's exact test), Q value = 1
Table S955. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TPP2 MUTATED | 1 | 5 | 2 |
TPP2 WILD-TYPE | 269 | 408 | 272 |
P value = 0.758 (Fisher's exact test), Q value = 1
Table S956. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TPP2 MUTATED | 1 | 2 | 3 | 2 | 0 |
TPP2 WILD-TYPE | 151 | 172 | 387 | 123 | 116 |
P value = 0.521 (Fisher's exact test), Q value = 1
Table S957. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TPP2 MUTATED | 2 | 1 | 3 |
TPP2 WILD-TYPE | 246 | 216 | 184 |
P value = 0.941 (Fisher's exact test), Q value = 1
Table S958. Gene #85: 'TPP2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TPP2 MUTATED | 2 | 0 | 2 | 1 | 1 | 0 |
TPP2 WILD-TYPE | 113 | 63 | 187 | 116 | 107 | 60 |
P value = 0.604 (Fisher's exact test), Q value = 1
Table S959. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
C15ORF39 MUTATED | 0 | 0 | 0 | 2 | 1 | 2 | 0 | 0 |
C15ORF39 WILD-TYPE | 21 | 38 | 114 | 95 | 107 | 71 | 19 | 39 |
P value = 0.51 (Fisher's exact test), Q value = 1
Table S960. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
C15ORF39 MUTATED | 0 | 1 | 2 | 2 | 0 |
C15ORF39 WILD-TYPE | 96 | 151 | 114 | 87 | 56 |
P value = 0.00585 (Fisher's exact test), Q value = 1
Table S961. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
C15ORF39 MUTATED | 0 | 1 | 0 | 6 | 1 |
C15ORF39 WILD-TYPE | 367 | 225 | 91 | 235 | 36 |
Figure S144. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D86V3.png)
P value = 0.0156 (Fisher's exact test), Q value = 1
Table S962. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
C15ORF39 MUTATED | 4 | 1 | 0 | 0 | 0 |
C15ORF39 WILD-TYPE | 112 | 180 | 157 | 83 | 111 |
Figure S145. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D86V4.png)
P value = 0.64 (Fisher's exact test), Q value = 1
Table S963. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
C15ORF39 MUTATED | 2 | 0 | 1 |
C15ORF39 WILD-TYPE | 144 | 129 | 117 |
P value = 0.498 (Fisher's exact test), Q value = 1
Table S964. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
C15ORF39 MUTATED | 0 | 1 | 2 | 0 | 0 |
C15ORF39 WILD-TYPE | 59 | 108 | 88 | 104 | 31 |
P value = 0.0279 (Fisher's exact test), Q value = 1
Table S965. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
C15ORF39 MUTATED | 6 | 0 | 1 | 2 | 0 | 0 | 0 |
C15ORF39 WILD-TYPE | 173 | 135 | 214 | 154 | 225 | 48 | 15 |
Figure S146. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D86V7.png)
P value = 0.00111 (Fisher's exact test), Q value = 1
Table S966. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
C15ORF39 MUTATED | 6 | 0 | 0 | 2 | 0 | 1 |
C15ORF39 WILD-TYPE | 162 | 222 | 188 | 170 | 171 | 51 |
Figure S147. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D86V8.png)
P value = 0.0149 (Fisher's exact test), Q value = 1
Table S967. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
C15ORF39 MUTATED | 0 | 2 | 6 |
C15ORF39 WILD-TYPE | 270 | 411 | 268 |
Figure S148. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D86V9.png)
P value = 0.0178 (Fisher's exact test), Q value = 1
Table S968. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
C15ORF39 MUTATED | 0 | 0 | 2 | 4 | 2 |
C15ORF39 WILD-TYPE | 152 | 174 | 388 | 121 | 114 |
Figure S149. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D86V10.png)
P value = 0.00203 (Fisher's exact test), Q value = 1
Table S969. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
C15ORF39 MUTATED | 0 | 0 | 5 |
C15ORF39 WILD-TYPE | 248 | 217 | 182 |
Figure S150. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D86V11.png)
P value = 0.00097 (Fisher's exact test), Q value = 1
Table S970. Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
C15ORF39 MUTATED | 5 | 0 | 0 | 0 | 0 | 0 |
C15ORF39 WILD-TYPE | 110 | 63 | 189 | 117 | 108 | 60 |
Figure S151. Get High-res Image Gene #86: 'C15ORF39 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D86V12.png)
P value = 0.867 (Fisher's exact test), Q value = 1
Table S971. Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SDC1 MUTATED | 2 | 0 | 0 | 1 | 0 |
SDC1 WILD-TYPE | 365 | 226 | 91 | 240 | 37 |
P value = 0.338 (Fisher's exact test), Q value = 1
Table S972. Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SDC1 MUTATED | 0 | 0 | 1 | 2 | 0 | 0 | 0 |
SDC1 WILD-TYPE | 179 | 135 | 214 | 154 | 225 | 48 | 15 |
P value = 0.00824 (Fisher's exact test), Q value = 1
Table S973. Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SDC1 MUTATED | 0 | 1 | 0 | 0 | 0 | 2 |
SDC1 WILD-TYPE | 168 | 221 | 188 | 172 | 171 | 50 |
Figure S152. Get High-res Image Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D87V8.png)
P value = 0.628 (Fisher's exact test), Q value = 1
Table S974. Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SDC1 MUTATED | 1 | 2 | 0 |
SDC1 WILD-TYPE | 269 | 411 | 274 |
P value = 0.91 (Fisher's exact test), Q value = 1
Table S975. Gene #87: 'SDC1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SDC1 MUTATED | 1 | 0 | 2 | 0 | 0 |
SDC1 WILD-TYPE | 151 | 174 | 388 | 125 | 116 |
P value = 0.467 (Fisher's exact test), Q value = 1
Table S976. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CASP8 MUTATED | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 1 |
CASP8 WILD-TYPE | 21 | 38 | 113 | 97 | 105 | 73 | 19 | 38 |
P value = 0.393 (Fisher's exact test), Q value = 1
Table S977. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CASP8 MUTATED | 1 | 3 | 0 | 0 | 1 |
CASP8 WILD-TYPE | 95 | 149 | 116 | 89 | 55 |
P value = 0.123 (Fisher's exact test), Q value = 1
Table S978. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CASP8 MUTATED | 4 | 1 | 4 | 3 | 0 |
CASP8 WILD-TYPE | 363 | 225 | 87 | 238 | 37 |
P value = 0.342 (Fisher's exact test), Q value = 1
Table S979. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CASP8 MUTATED | 2 | 3 | 0 | 2 | 2 |
CASP8 WILD-TYPE | 114 | 178 | 157 | 81 | 109 |
P value = 0.529 (Fisher's exact test), Q value = 1
Table S980. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CASP8 MUTATED | 1 | 3 | 1 |
CASP8 WILD-TYPE | 145 | 126 | 117 |
P value = 0.685 (Fisher's exact test), Q value = 1
Table S981. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CASP8 MUTATED | 2 | 1 | 1 | 1 | 0 |
CASP8 WILD-TYPE | 57 | 108 | 89 | 103 | 31 |
P value = 0.177 (Fisher's exact test), Q value = 1
Table S982. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CASP8 MUTATED | 3 | 1 | 6 | 0 | 1 | 1 | 0 |
CASP8 WILD-TYPE | 176 | 134 | 209 | 156 | 224 | 47 | 15 |
P value = 0.494 (Fisher's exact test), Q value = 1
Table S983. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CASP8 MUTATED | 3 | 3 | 4 | 2 | 0 | 0 |
CASP8 WILD-TYPE | 165 | 219 | 184 | 170 | 171 | 52 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S984. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CASP8 MUTATED | 5 | 4 | 3 |
CASP8 WILD-TYPE | 265 | 409 | 271 |
P value = 0.457 (Fisher's exact test), Q value = 1
Table S985. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CASP8 MUTATED | 1 | 3 | 3 | 3 | 2 |
CASP8 WILD-TYPE | 151 | 171 | 387 | 122 | 114 |
P value = 0.743 (Fisher's exact test), Q value = 1
Table S986. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CASP8 MUTATED | 2 | 3 | 3 |
CASP8 WILD-TYPE | 246 | 214 | 184 |
P value = 0.461 (Fisher's exact test), Q value = 1
Table S987. Gene #88: 'CASP8 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CASP8 MUTATED | 3 | 1 | 2 | 0 | 2 | 0 |
CASP8 WILD-TYPE | 112 | 62 | 187 | 117 | 106 | 60 |
P value = 0.522 (Fisher's exact test), Q value = 1
Table S988. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TNRC6B MUTATED | 0 | 1 | 1 | 4 | 3 | 0 | 0 | 0 |
TNRC6B WILD-TYPE | 21 | 37 | 113 | 93 | 105 | 73 | 19 | 39 |
P value = 0.155 (Fisher's exact test), Q value = 1
Table S989. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TNRC6B MUTATED | 1 | 3 | 0 | 4 | 1 |
TNRC6B WILD-TYPE | 95 | 149 | 116 | 85 | 55 |
P value = 0.286 (Fisher's exact test), Q value = 1
Table S990. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TNRC6B MUTATED | 8 | 1 | 3 | 5 | 0 |
TNRC6B WILD-TYPE | 359 | 225 | 88 | 236 | 37 |
P value = 0.945 (Fisher's exact test), Q value = 1
Table S991. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TNRC6B MUTATED | 2 | 4 | 5 | 2 | 2 |
TNRC6B WILD-TYPE | 114 | 177 | 152 | 81 | 109 |
P value = 0.508 (Fisher's exact test), Q value = 1
Table S992. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TNRC6B MUTATED | 4 | 1 | 2 |
TNRC6B WILD-TYPE | 142 | 128 | 116 |
P value = 0.417 (Fisher's exact test), Q value = 1
Table S993. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TNRC6B MUTATED | 1 | 1 | 4 | 1 | 0 |
TNRC6B WILD-TYPE | 58 | 108 | 86 | 103 | 31 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S994. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TNRC6B MUTATED | 5 | 2 | 7 | 2 | 2 | 0 | 0 |
TNRC6B WILD-TYPE | 174 | 133 | 208 | 154 | 223 | 48 | 15 |
P value = 0.441 (Fisher's exact test), Q value = 1
Table S995. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TNRC6B MUTATED | 5 | 4 | 2 | 5 | 1 | 1 |
TNRC6B WILD-TYPE | 163 | 218 | 186 | 167 | 170 | 51 |
P value = 0.792 (Fisher's exact test), Q value = 1
Table S996. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TNRC6B MUTATED | 5 | 9 | 4 |
TNRC6B WILD-TYPE | 265 | 404 | 270 |
P value = 0.775 (Fisher's exact test), Q value = 1
Table S997. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TNRC6B MUTATED | 3 | 3 | 7 | 4 | 1 |
TNRC6B WILD-TYPE | 149 | 171 | 383 | 121 | 115 |
P value = 1 (Fisher's exact test), Q value = 1
Table S998. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TNRC6B MUTATED | 4 | 3 | 3 |
TNRC6B WILD-TYPE | 244 | 214 | 184 |
P value = 0.822 (Fisher's exact test), Q value = 1
Table S999. Gene #89: 'TNRC6B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TNRC6B MUTATED | 2 | 1 | 3 | 1 | 1 | 2 |
TNRC6B WILD-TYPE | 113 | 62 | 186 | 116 | 107 | 58 |
P value = 0.144 (Fisher's exact test), Q value = 1
Table S1000. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
IRS4 MUTATED | 1 | 2 | 1 | 1 | 0 | 1 | 0 | 1 |
IRS4 WILD-TYPE | 20 | 36 | 113 | 96 | 108 | 72 | 19 | 38 |
P value = 0.781 (Fisher's exact test), Q value = 1
Table S1001. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
IRS4 MUTATED | 1 | 4 | 1 | 1 | 0 |
IRS4 WILD-TYPE | 95 | 148 | 115 | 88 | 56 |
P value = 0.279 (Fisher's exact test), Q value = 1
Table S1002. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
IRS4 MUTATED | 2 | 2 | 1 | 6 | 0 |
IRS4 WILD-TYPE | 365 | 224 | 90 | 235 | 37 |
P value = 0.642 (Fisher's exact test), Q value = 1
Table S1003. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
IRS4 MUTATED | 3 | 1 | 2 | 1 | 2 |
IRS4 WILD-TYPE | 113 | 180 | 155 | 82 | 109 |
P value = 0.382 (Fisher's exact test), Q value = 1
Table S1004. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
IRS4 MUTATED | 3 | 2 | 0 |
IRS4 WILD-TYPE | 143 | 127 | 118 |
P value = 0.957 (Fisher's exact test), Q value = 1
Table S1005. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
IRS4 MUTATED | 1 | 1 | 1 | 2 | 0 |
IRS4 WILD-TYPE | 58 | 108 | 89 | 102 | 31 |
P value = 0.118 (Fisher's exact test), Q value = 1
Table S1006. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
IRS4 MUTATED | 3 | 2 | 0 | 2 | 2 | 1 | 1 |
IRS4 WILD-TYPE | 176 | 133 | 215 | 154 | 223 | 47 | 14 |
P value = 0.364 (Fisher's exact test), Q value = 1
Table S1007. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
IRS4 MUTATED | 3 | 4 | 1 | 0 | 2 | 1 |
IRS4 WILD-TYPE | 165 | 218 | 187 | 172 | 169 | 51 |
P value = 0.781 (Fisher's exact test), Q value = 1
Table S1008. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
IRS4 MUTATED | 2 | 4 | 4 |
IRS4 WILD-TYPE | 268 | 409 | 270 |
P value = 0.648 (Fisher's exact test), Q value = 1
Table S1009. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
IRS4 MUTATED | 0 | 2 | 5 | 1 | 2 |
IRS4 WILD-TYPE | 152 | 172 | 385 | 124 | 114 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1010. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
IRS4 MUTATED | 2 | 1 | 1 |
IRS4 WILD-TYPE | 246 | 216 | 186 |
P value = 0.902 (Fisher's exact test), Q value = 1
Table S1011. Gene #90: 'IRS4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
IRS4 MUTATED | 1 | 0 | 2 | 0 | 1 | 0 |
IRS4 WILD-TYPE | 114 | 63 | 187 | 117 | 107 | 60 |
P value = 0.905 (Fisher's exact test), Q value = 1
Table S1012. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RHOA MUTATED | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 |
RHOA WILD-TYPE | 21 | 38 | 113 | 96 | 108 | 72 | 19 | 39 |
P value = 0.588 (Fisher's exact test), Q value = 1
Table S1013. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RHOA MUTATED | 1 | 0 | 1 | 1 | 0 |
RHOA WILD-TYPE | 95 | 152 | 115 | 88 | 56 |
P value = 0.857 (Fisher's exact test), Q value = 1
Table S1014. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RHOA MUTATED | 3 | 1 | 1 | 1 | 0 |
RHOA WILD-TYPE | 364 | 225 | 90 | 240 | 37 |
P value = 0.394 (Fisher's exact test), Q value = 1
Table S1015. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RHOA MUTATED | 1 | 0 | 2 | 1 | 0 |
RHOA WILD-TYPE | 115 | 181 | 155 | 82 | 111 |
P value = 0.111 (Fisher's exact test), Q value = 1
Table S1016. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
RHOA MUTATED | 3 | 0 | 0 |
RHOA WILD-TYPE | 143 | 129 | 118 |
P value = 0.282 (Fisher's exact test), Q value = 1
Table S1017. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
RHOA MUTATED | 0 | 0 | 1 | 1 | 1 |
RHOA WILD-TYPE | 59 | 109 | 89 | 103 | 30 |
P value = 0.872 (Fisher's exact test), Q value = 1
Table S1018. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RHOA MUTATED | 1 | 0 | 1 | 2 | 2 | 0 | 0 |
RHOA WILD-TYPE | 178 | 135 | 214 | 154 | 223 | 48 | 15 |
P value = 0.124 (Fisher's exact test), Q value = 1
Table S1019. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RHOA MUTATED | 1 | 1 | 0 | 3 | 0 | 1 |
RHOA WILD-TYPE | 167 | 221 | 188 | 169 | 171 | 51 |
P value = 0.777 (Fisher's exact test), Q value = 1
Table S1020. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RHOA MUTATED | 2 | 2 | 2 |
RHOA WILD-TYPE | 268 | 411 | 272 |
P value = 0.581 (Fisher's exact test), Q value = 1
Table S1021. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RHOA MUTATED | 2 | 0 | 3 | 1 | 0 |
RHOA WILD-TYPE | 150 | 174 | 387 | 124 | 116 |
P value = 0.385 (Fisher's exact test), Q value = 1
Table S1022. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RHOA MUTATED | 0 | 2 | 1 |
RHOA WILD-TYPE | 248 | 215 | 186 |
P value = 0.403 (Fisher's exact test), Q value = 1
Table S1023. Gene #91: 'RHOA MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RHOA MUTATED | 0 | 0 | 1 | 0 | 2 | 0 |
RHOA WILD-TYPE | 115 | 63 | 188 | 117 | 106 | 60 |
P value = 0.238 (Fisher's exact test), Q value = 1
Table S1024. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TTPAL MUTATED | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 |
TTPAL WILD-TYPE | 21 | 37 | 114 | 95 | 108 | 73 | 19 | 39 |
P value = 0.305 (Fisher's exact test), Q value = 1
Table S1025. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TTPAL MUTATED | 0 | 1 | 0 | 2 | 0 |
TTPAL WILD-TYPE | 96 | 151 | 116 | 87 | 56 |
P value = 0.179 (Fisher's exact test), Q value = 1
Table S1026. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TTPAL MUTATED | 0 | 1 | 0 | 3 | 0 |
TTPAL WILD-TYPE | 367 | 225 | 91 | 238 | 37 |
P value = 0.645 (Fisher's exact test), Q value = 1
Table S1027. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TTPAL MUTATED | 2 | 0 | 1 |
TTPAL WILD-TYPE | 144 | 129 | 117 |
P value = 0.46 (Fisher's exact test), Q value = 1
Table S1028. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TTPAL MUTATED | 0 | 0 | 2 | 1 | 0 |
TTPAL WILD-TYPE | 59 | 109 | 88 | 103 | 31 |
P value = 0.386 (Fisher's exact test), Q value = 1
Table S1029. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TTPAL MUTATED | 2 | 1 | 0 | 1 | 0 | 0 | 0 |
TTPAL WILD-TYPE | 177 | 134 | 215 | 155 | 225 | 48 | 15 |
P value = 0.326 (Fisher's exact test), Q value = 1
Table S1030. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TTPAL MUTATED | 2 | 2 | 0 | 0 | 0 | 0 |
TTPAL WILD-TYPE | 166 | 220 | 188 | 172 | 171 | 52 |
P value = 0.215 (Fisher's exact test), Q value = 1
Table S1031. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TTPAL MUTATED | 0 | 1 | 3 |
TTPAL WILD-TYPE | 270 | 412 | 271 |
P value = 0.28 (Fisher's exact test), Q value = 1
Table S1032. Gene #92: 'TTPAL MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TTPAL MUTATED | 0 | 0 | 2 | 2 | 0 |
TTPAL WILD-TYPE | 152 | 174 | 388 | 123 | 116 |
P value = 0.401 (Fisher's exact test), Q value = 1
Table S1033. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MLL4 MUTATED | 1 | 1 | 4 | 2 | 0 | 1 | 0 | 1 |
MLL4 WILD-TYPE | 20 | 37 | 110 | 95 | 108 | 72 | 19 | 38 |
P value = 0.511 (Fisher's exact test), Q value = 1
Table S1034. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MLL4 MUTATED | 4 | 2 | 2 | 2 | 0 |
MLL4 WILD-TYPE | 92 | 150 | 114 | 87 | 56 |
P value = 0.85 (Fisher's exact test), Q value = 1
Table S1035. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MLL4 MUTATED | 4 | 3 | 2 | 4 | 0 |
MLL4 WILD-TYPE | 363 | 223 | 89 | 237 | 37 |
P value = 0.59 (Fisher's exact test), Q value = 1
Table S1036. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MLL4 MUTATED | 0 | 1 | 2 | 1 | 0 |
MLL4 WILD-TYPE | 116 | 180 | 155 | 82 | 111 |
P value = 0.131 (Fisher's exact test), Q value = 1
Table S1037. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MLL4 MUTATED | 6 | 1 | 1 |
MLL4 WILD-TYPE | 140 | 128 | 117 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S1038. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MLL4 MUTATED | 0 | 1 | 3 | 4 | 0 |
MLL4 WILD-TYPE | 59 | 108 | 87 | 100 | 31 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S1039. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MLL4 MUTATED | 2 | 3 | 0 | 3 | 4 | 1 | 0 |
MLL4 WILD-TYPE | 177 | 132 | 215 | 153 | 221 | 47 | 15 |
P value = 0.222 (Fisher's exact test), Q value = 1
Table S1040. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MLL4 MUTATED | 2 | 3 | 0 | 5 | 2 | 1 |
MLL4 WILD-TYPE | 166 | 219 | 188 | 167 | 169 | 51 |
P value = 0.18 (Fisher's exact test), Q value = 1
Table S1041. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MLL4 MUTATED | 1 | 6 | 6 |
MLL4 WILD-TYPE | 269 | 407 | 268 |
P value = 0.102 (Fisher's exact test), Q value = 1
Table S1042. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MLL4 MUTATED | 1 | 0 | 7 | 1 | 4 |
MLL4 WILD-TYPE | 151 | 174 | 383 | 124 | 112 |
P value = 0.126 (Fisher's exact test), Q value = 1
Table S1043. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MLL4 MUTATED | 4 | 0 | 3 |
MLL4 WILD-TYPE | 244 | 217 | 184 |
P value = 0.223 (Fisher's exact test), Q value = 1
Table S1044. Gene #93: 'MLL4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MLL4 MUTATED | 1 | 1 | 5 | 0 | 0 | 0 |
MLL4 WILD-TYPE | 114 | 62 | 184 | 117 | 108 | 60 |
P value = 0.871 (Fisher's exact test), Q value = 1
Table S1045. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ATHL1 MUTATED | 0 | 0 | 3 | 1 | 2 | 0 | 0 | 0 |
ATHL1 WILD-TYPE | 21 | 38 | 111 | 96 | 106 | 73 | 19 | 39 |
P value = 0.321 (Fisher's exact test), Q value = 1
Table S1046. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ATHL1 MUTATED | 3 | 2 | 0 | 1 | 0 |
ATHL1 WILD-TYPE | 93 | 150 | 116 | 88 | 56 |
P value = 0.0502 (Fisher's exact test), Q value = 1
Table S1047. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ATHL1 MUTATED | 1 | 2 | 0 | 6 | 1 |
ATHL1 WILD-TYPE | 366 | 224 | 91 | 235 | 36 |
P value = 0.334 (Fisher's exact test), Q value = 1
Table S1048. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ATHL1 MUTATED | 1 | 1 | 4 | 1 | 0 |
ATHL1 WILD-TYPE | 115 | 180 | 153 | 82 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1049. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ATHL1 MUTATED | 2 | 2 | 1 |
ATHL1 WILD-TYPE | 144 | 127 | 117 |
P value = 0.708 (Fisher's exact test), Q value = 1
Table S1050. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ATHL1 MUTATED | 0 | 1 | 1 | 3 | 0 |
ATHL1 WILD-TYPE | 59 | 108 | 89 | 101 | 31 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1051. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ATHL1 MUTATED | 2 | 1 | 2 | 2 | 3 | 0 | 0 |
ATHL1 WILD-TYPE | 177 | 134 | 213 | 154 | 222 | 48 | 15 |
P value = 0.0287 (Fisher's exact test), Q value = 1
Table S1052. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ATHL1 MUTATED | 2 | 0 | 1 | 6 | 1 | 0 |
ATHL1 WILD-TYPE | 166 | 222 | 187 | 166 | 170 | 52 |
Figure S153. Get High-res Image Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D94V8.png)
P value = 0.0853 (Fisher's exact test), Q value = 1
Table S1053. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ATHL1 MUTATED | 0 | 7 | 3 |
ATHL1 WILD-TYPE | 270 | 406 | 271 |
P value = 0.171 (Fisher's exact test), Q value = 1
Table S1054. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ATHL1 MUTATED | 0 | 0 | 7 | 2 | 1 |
ATHL1 WILD-TYPE | 152 | 174 | 383 | 123 | 115 |
P value = 0.124 (Fisher's exact test), Q value = 1
Table S1055. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ATHL1 MUTATED | 4 | 0 | 3 |
ATHL1 WILD-TYPE | 244 | 217 | 184 |
P value = 0.197 (Fisher's exact test), Q value = 1
Table S1056. Gene #94: 'ATHL1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ATHL1 MUTATED | 2 | 0 | 5 | 0 | 0 | 0 |
ATHL1 WILD-TYPE | 113 | 63 | 184 | 117 | 108 | 60 |
P value = 0.257 (Fisher's exact test), Q value = 1
Table S1057. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TMEM120B MUTATED | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 |
TMEM120B WILD-TYPE | 21 | 38 | 114 | 96 | 107 | 73 | 18 | 39 |
P value = 0.251 (Fisher's exact test), Q value = 1
Table S1058. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TMEM120B MUTATED | 0 | 0 | 1 | 1 | 1 |
TMEM120B WILD-TYPE | 96 | 152 | 115 | 88 | 55 |
P value = 0.933 (Fisher's exact test), Q value = 1
Table S1059. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TMEM120B MUTATED | 2 | 1 | 0 | 2 | 0 |
TMEM120B WILD-TYPE | 365 | 225 | 91 | 239 | 37 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1060. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TMEM120B MUTATED | 1 | 2 | 1 | 0 | 1 |
TMEM120B WILD-TYPE | 115 | 179 | 156 | 83 | 110 |
P value = 0.0488 (Fisher's exact test), Q value = 1
Table S1061. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TMEM120B MUTATED | 1 | 2 | 1 | 0 | 0 | 0 | 1 |
TMEM120B WILD-TYPE | 178 | 133 | 214 | 156 | 225 | 48 | 14 |
Figure S154. Get High-res Image Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D95V7.png)
P value = 0.954 (Fisher's exact test), Q value = 1
Table S1062. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TMEM120B MUTATED | 1 | 2 | 1 | 1 | 0 | 0 |
TMEM120B WILD-TYPE | 167 | 220 | 187 | 171 | 171 | 52 |
P value = 0.74 (Fisher's exact test), Q value = 1
Table S1063. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TMEM120B MUTATED | 2 | 2 | 1 |
TMEM120B WILD-TYPE | 268 | 411 | 273 |
P value = 0.381 (Fisher's exact test), Q value = 1
Table S1064. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TMEM120B MUTATED | 2 | 1 | 1 | 1 | 0 |
TMEM120B WILD-TYPE | 150 | 173 | 389 | 124 | 116 |
P value = 0.204 (Fisher's exact test), Q value = 1
Table S1065. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TMEM120B MUTATED | 0 | 2 | 2 |
TMEM120B WILD-TYPE | 248 | 215 | 185 |
P value = 0.59 (Fisher's exact test), Q value = 1
Table S1066. Gene #95: 'TMEM120B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TMEM120B MUTATED | 1 | 0 | 1 | 0 | 2 | 0 |
TMEM120B WILD-TYPE | 114 | 63 | 188 | 117 | 106 | 60 |
P value = 0.658 (Fisher's exact test), Q value = 1
Table S1067. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
LILRA6 MUTATED | 0 | 0 | 0 | 1 | 1 | 2 | 0 | 0 |
LILRA6 WILD-TYPE | 21 | 38 | 114 | 96 | 107 | 71 | 19 | 39 |
P value = 0.222 (Fisher's exact test), Q value = 1
Table S1068. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
LILRA6 MUTATED | 0 | 0 | 2 | 1 | 1 |
LILRA6 WILD-TYPE | 96 | 152 | 114 | 88 | 55 |
P value = 0.748 (Fisher's exact test), Q value = 1
Table S1069. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
LILRA6 MUTATED | 2 | 2 | 1 | 1 | 0 |
LILRA6 WILD-TYPE | 365 | 224 | 90 | 240 | 37 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S1070. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
LILRA6 MUTATED | 1 | 3 | 0 |
LILRA6 WILD-TYPE | 145 | 126 | 118 |
P value = 0.61 (Fisher's exact test), Q value = 1
Table S1071. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
LILRA6 MUTATED | 1 | 0 | 1 | 2 | 0 |
LILRA6 WILD-TYPE | 58 | 109 | 89 | 102 | 31 |
P value = 0.983 (Fisher's exact test), Q value = 1
Table S1072. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
LILRA6 MUTATED | 1 | 1 | 2 | 1 | 1 | 0 | 0 |
LILRA6 WILD-TYPE | 178 | 134 | 213 | 155 | 224 | 48 | 15 |
P value = 0.964 (Fisher's exact test), Q value = 1
Table S1073. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
LILRA6 MUTATED | 1 | 1 | 1 | 2 | 1 | 0 |
LILRA6 WILD-TYPE | 167 | 221 | 187 | 170 | 170 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1074. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
LILRA6 MUTATED | 1 | 3 | 1 |
LILRA6 WILD-TYPE | 269 | 410 | 273 |
P value = 0.478 (Fisher's exact test), Q value = 1
Table S1075. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
LILRA6 MUTATED | 1 | 2 | 1 | 1 | 0 |
LILRA6 WILD-TYPE | 151 | 172 | 389 | 124 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1076. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
LILRA6 MUTATED | 1 | 1 | 1 |
LILRA6 WILD-TYPE | 247 | 216 | 186 |
P value = 0.712 (Fisher's exact test), Q value = 1
Table S1077. Gene #96: 'LILRA6 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
LILRA6 MUTATED | 1 | 0 | 0 | 1 | 1 | 0 |
LILRA6 WILD-TYPE | 114 | 63 | 189 | 116 | 107 | 60 |
P value = 0.797 (Fisher's exact test), Q value = 1
Table S1078. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MLH1 MUTATED | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 |
MLH1 WILD-TYPE | 21 | 38 | 113 | 97 | 106 | 73 | 19 | 39 |
P value = 0.731 (Fisher's exact test), Q value = 1
Table S1079. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MLH1 MUTATED | 1 | 2 | 0 | 0 | 0 |
MLH1 WILD-TYPE | 95 | 150 | 116 | 89 | 56 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1080. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MLH1 MUTATED | 3 | 1 | 0 | 2 | 0 |
MLH1 WILD-TYPE | 364 | 225 | 91 | 239 | 37 |
P value = 0.868 (Fisher's exact test), Q value = 1
Table S1081. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MLH1 MUTATED | 1 | 1 | 1 | 1 | 0 |
MLH1 WILD-TYPE | 115 | 180 | 156 | 82 | 111 |
P value = 0.716 (Fisher's exact test), Q value = 1
Table S1082. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MLH1 MUTATED | 1 | 0 | 2 | 0 | 3 | 0 | 0 |
MLH1 WILD-TYPE | 178 | 135 | 213 | 156 | 222 | 48 | 15 |
P value = 0.416 (Fisher's exact test), Q value = 1
Table S1083. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MLH1 MUTATED | 1 | 0 | 1 | 3 | 1 | 0 |
MLH1 WILD-TYPE | 167 | 222 | 187 | 169 | 170 | 52 |
P value = 0.184 (Fisher's exact test), Q value = 1
Table S1084. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MLH1 MUTATED | 0 | 5 | 1 |
MLH1 WILD-TYPE | 270 | 408 | 273 |
P value = 0.802 (Fisher's exact test), Q value = 1
Table S1085. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MLH1 MUTATED | 0 | 1 | 4 | 1 | 0 |
MLH1 WILD-TYPE | 152 | 173 | 386 | 124 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1086. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MLH1 MUTATED | 2 | 1 | 1 |
MLH1 WILD-TYPE | 246 | 216 | 186 |
P value = 0.963 (Fisher's exact test), Q value = 1
Table S1087. Gene #97: 'MLH1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MLH1 MUTATED | 1 | 0 | 2 | 1 | 0 | 0 |
MLH1 WILD-TYPE | 114 | 63 | 187 | 116 | 108 | 60 |
P value = 0.0184 (Fisher's exact test), Q value = 1
Table S1088. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
NUP93 MUTATED | 0 | 0 | 0 | 3 | 1 |
NUP93 WILD-TYPE | 367 | 226 | 91 | 238 | 36 |
Figure S155. Get High-res Image Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D98V3.png)
P value = 0.381 (Fisher's exact test), Q value = 1
Table S1089. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
NUP93 MUTATED | 2 | 0 | 1 | 0 | 1 |
NUP93 WILD-TYPE | 114 | 181 | 156 | 83 | 110 |
P value = 0.0273 (Fisher's exact test), Q value = 1
Table S1090. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
NUP93 MUTATED | 2 | 0 | 0 | 1 | 0 | 0 | 1 |
NUP93 WILD-TYPE | 177 | 135 | 215 | 155 | 225 | 48 | 14 |
Figure S156. Get High-res Image Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D98V7.png)
P value = 0.594 (Fisher's exact test), Q value = 1
Table S1091. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
NUP93 MUTATED | 1 | 1 | 0 | 2 | 0 | 0 |
NUP93 WILD-TYPE | 167 | 221 | 188 | 170 | 171 | 52 |
P value = 0.79 (Fisher's exact test), Q value = 1
Table S1092. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
NUP93 MUTATED | 0 | 2 | 1 |
NUP93 WILD-TYPE | 270 | 411 | 273 |
P value = 0.761 (Fisher's exact test), Q value = 1
Table S1093. Gene #98: 'NUP93 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
NUP93 MUTATED | 0 | 0 | 3 | 0 | 0 |
NUP93 WILD-TYPE | 152 | 174 | 387 | 125 | 116 |
P value = 0.646 (Fisher's exact test), Q value = 1
Table S1094. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ALDH1L1 MUTATED | 0 | 1 | 2 | 1 | 0 | 1 | 0 | 1 |
ALDH1L1 WILD-TYPE | 21 | 37 | 112 | 96 | 108 | 72 | 19 | 38 |
P value = 0.92 (Fisher's exact test), Q value = 1
Table S1095. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ALDH1L1 MUTATED | 2 | 2 | 1 | 1 | 0 |
ALDH1L1 WILD-TYPE | 94 | 150 | 115 | 88 | 56 |
P value = 0.338 (Fisher's exact test), Q value = 1
Table S1096. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ALDH1L1 MUTATED | 1 | 3 | 1 | 4 | 0 |
ALDH1L1 WILD-TYPE | 366 | 223 | 90 | 237 | 37 |
P value = 0.529 (Fisher's exact test), Q value = 1
Table S1097. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ALDH1L1 MUTATED | 2 | 1 | 3 | 1 | 0 |
ALDH1L1 WILD-TYPE | 114 | 180 | 154 | 82 | 111 |
P value = 0.692 (Fisher's exact test), Q value = 1
Table S1098. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ALDH1L1 MUTATED | 1 | 1 | 2 |
ALDH1L1 WILD-TYPE | 145 | 128 | 116 |
P value = 0.51 (Fisher's exact test), Q value = 1
Table S1099. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ALDH1L1 MUTATED | 0 | 3 | 0 | 1 | 0 |
ALDH1L1 WILD-TYPE | 59 | 106 | 90 | 103 | 31 |
P value = 0.466 (Fisher's exact test), Q value = 1
Table S1100. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ALDH1L1 MUTATED | 2 | 2 | 0 | 3 | 2 | 0 | 0 |
ALDH1L1 WILD-TYPE | 177 | 133 | 215 | 153 | 223 | 48 | 15 |
P value = 0.404 (Fisher's exact test), Q value = 1
Table S1101. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ALDH1L1 MUTATED | 2 | 2 | 0 | 3 | 1 | 1 |
ALDH1L1 WILD-TYPE | 166 | 220 | 188 | 169 | 170 | 51 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1102. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ALDH1L1 MUTATED | 2 | 4 | 3 |
ALDH1L1 WILD-TYPE | 268 | 409 | 271 |
P value = 0.366 (Fisher's exact test), Q value = 1
Table S1103. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ALDH1L1 MUTATED | 0 | 3 | 4 | 2 | 0 |
ALDH1L1 WILD-TYPE | 152 | 171 | 386 | 123 | 116 |
P value = 0.391 (Fisher's exact test), Q value = 1
Table S1104. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ALDH1L1 MUTATED | 2 | 0 | 2 |
ALDH1L1 WILD-TYPE | 246 | 217 | 185 |
P value = 0.603 (Fisher's exact test), Q value = 1
Table S1105. Gene #99: 'ALDH1L1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ALDH1L1 MUTATED | 1 | 0 | 3 | 0 | 0 | 0 |
ALDH1L1 WILD-TYPE | 114 | 63 | 186 | 117 | 108 | 60 |
P value = 0.564 (Fisher's exact test), Q value = 1
Table S1106. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
LRIG2 MUTATED | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 |
LRIG2 WILD-TYPE | 21 | 38 | 111 | 96 | 108 | 73 | 19 | 39 |
P value = 0.0322 (Fisher's exact test), Q value = 1
Table S1107. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
LRIG2 MUTATED | 3 | 0 | 0 | 1 | 0 |
LRIG2 WILD-TYPE | 93 | 152 | 116 | 88 | 56 |
Figure S157. Get High-res Image Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D100V2.png)
P value = 0.216 (Fisher's exact test), Q value = 1
Table S1108. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
LRIG2 MUTATED | 1 | 3 | 0 | 2 | 1 |
LRIG2 WILD-TYPE | 366 | 223 | 91 | 239 | 36 |
P value = 0.613 (Fisher's exact test), Q value = 1
Table S1109. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
LRIG2 MUTATED | 2 | 1 | 1 | 0 | 0 |
LRIG2 WILD-TYPE | 114 | 180 | 156 | 83 | 111 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S1110. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
LRIG2 MUTATED | 1 | 3 | 0 |
LRIG2 WILD-TYPE | 145 | 126 | 118 |
P value = 0.276 (Fisher's exact test), Q value = 1
Table S1111. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
LRIG2 MUTATED | 0 | 0 | 1 | 3 | 0 |
LRIG2 WILD-TYPE | 59 | 109 | 89 | 101 | 31 |
P value = 0.317 (Fisher's exact test), Q value = 1
Table S1112. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
LRIG2 MUTATED | 1 | 0 | 0 | 2 | 4 | 0 | 0 |
LRIG2 WILD-TYPE | 178 | 135 | 215 | 154 | 221 | 48 | 15 |
P value = 0.284 (Fisher's exact test), Q value = 1
Table S1113. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
LRIG2 MUTATED | 1 | 1 | 0 | 1 | 3 | 1 |
LRIG2 WILD-TYPE | 167 | 221 | 188 | 171 | 168 | 51 |
P value = 0.721 (Fisher's exact test), Q value = 1
Table S1114. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
LRIG2 MUTATED | 1 | 3 | 3 |
LRIG2 WILD-TYPE | 269 | 410 | 271 |
P value = 0.974 (Fisher's exact test), Q value = 1
Table S1115. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
LRIG2 MUTATED | 1 | 1 | 4 | 1 | 0 |
LRIG2 WILD-TYPE | 151 | 173 | 386 | 124 | 116 |
P value = 0.512 (Fisher's exact test), Q value = 1
Table S1116. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
LRIG2 MUTATED | 2 | 0 | 1 |
LRIG2 WILD-TYPE | 246 | 217 | 186 |
P value = 0.38 (Fisher's exact test), Q value = 1
Table S1117. Gene #100: 'LRIG2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
LRIG2 MUTATED | 0 | 0 | 2 | 0 | 0 | 1 |
LRIG2 WILD-TYPE | 115 | 63 | 187 | 117 | 108 | 59 |
P value = 0.437 (Fisher's exact test), Q value = 1
Table S1118. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CCDC78 MUTATED | 1 | 3 | 0 | 1 | 0 |
CCDC78 WILD-TYPE | 366 | 223 | 91 | 240 | 37 |
P value = 0.667 (Fisher's exact test), Q value = 1
Table S1119. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CCDC78 MUTATED | 0 | 2 | 2 | 0 | 0 |
CCDC78 WILD-TYPE | 116 | 179 | 155 | 83 | 111 |
P value = 0.654 (Fisher's exact test), Q value = 1
Table S1120. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CCDC78 MUTATED | 0 | 0 | 1 | 2 | 2 | 0 | 0 |
CCDC78 WILD-TYPE | 179 | 135 | 214 | 154 | 223 | 48 | 15 |
P value = 0.173 (Fisher's exact test), Q value = 1
Table S1121. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CCDC78 MUTATED | 0 | 0 | 1 | 2 | 1 | 1 |
CCDC78 WILD-TYPE | 168 | 222 | 187 | 170 | 170 | 51 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1122. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CCDC78 MUTATED | 1 | 3 | 1 |
CCDC78 WILD-TYPE | 269 | 410 | 273 |
P value = 0.923 (Fisher's exact test), Q value = 1
Table S1123. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CCDC78 MUTATED | 1 | 1 | 2 | 0 | 1 |
CCDC78 WILD-TYPE | 151 | 173 | 388 | 125 | 115 |
P value = 0.74 (Fisher's exact test), Q value = 1
Table S1124. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CCDC78 MUTATED | 3 | 1 | 1 |
CCDC78 WILD-TYPE | 245 | 216 | 186 |
P value = 0.743 (Fisher's exact test), Q value = 1
Table S1125. Gene #101: 'CCDC78 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CCDC78 MUTATED | 1 | 0 | 2 | 0 | 1 | 1 |
CCDC78 WILD-TYPE | 114 | 63 | 187 | 117 | 107 | 59 |
P value = 0.76 (Fisher's exact test), Q value = 1
Table S1126. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GAL3ST1 MUTATED | 1 | 2 | 0 | 2 | 0 |
GAL3ST1 WILD-TYPE | 366 | 224 | 91 | 239 | 37 |
P value = 0.647 (Fisher's exact test), Q value = 1
Table S1127. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
GAL3ST1 MUTATED | 1 | 0 | 1 | 0 | 1 |
GAL3ST1 WILD-TYPE | 115 | 181 | 156 | 83 | 110 |
P value = 0.47 (Fisher's exact test), Q value = 1
Table S1128. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GAL3ST1 MUTATED | 1 | 1 | 0 | 0 | 3 | 0 | 0 |
GAL3ST1 WILD-TYPE | 178 | 134 | 215 | 156 | 222 | 48 | 15 |
P value = 0.916 (Fisher's exact test), Q value = 1
Table S1129. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GAL3ST1 MUTATED | 1 | 2 | 0 | 1 | 1 | 0 |
GAL3ST1 WILD-TYPE | 167 | 220 | 188 | 171 | 170 | 52 |
P value = 0.34 (Fisher's exact test), Q value = 1
Table S1130. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GAL3ST1 MUTATED | 3 | 1 | 1 |
GAL3ST1 WILD-TYPE | 267 | 412 | 273 |
P value = 0.961 (Fisher's exact test), Q value = 1
Table S1131. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GAL3ST1 MUTATED | 1 | 1 | 2 | 1 | 0 |
GAL3ST1 WILD-TYPE | 151 | 173 | 388 | 124 | 116 |
P value = 0.385 (Fisher's exact test), Q value = 1
Table S1132. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
GAL3ST1 MUTATED | 0 | 2 | 1 |
GAL3ST1 WILD-TYPE | 248 | 215 | 186 |
P value = 0.709 (Fisher's exact test), Q value = 1
Table S1133. Gene #102: 'GAL3ST1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
GAL3ST1 MUTATED | 1 | 0 | 0 | 1 | 1 | 0 |
GAL3ST1 WILD-TYPE | 114 | 63 | 189 | 116 | 107 | 60 |
P value = 0.603 (Fisher's exact test), Q value = 1
Table S1134. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FAM20C MUTATED | 1 | 1 | 1 | 1 | 0 |
FAM20C WILD-TYPE | 366 | 225 | 90 | 240 | 37 |
P value = 0.853 (Fisher's exact test), Q value = 1
Table S1135. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FAM20C MUTATED | 1 | 1 | 0 | 1 | 1 | 0 | 0 |
FAM20C WILD-TYPE | 178 | 134 | 215 | 155 | 224 | 48 | 15 |
P value = 0.24 (Fisher's exact test), Q value = 1
Table S1136. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FAM20C MUTATED | 1 | 0 | 1 | 0 | 1 | 1 |
FAM20C WILD-TYPE | 167 | 222 | 187 | 172 | 170 | 51 |
P value = 0.818 (Fisher's exact test), Q value = 1
Table S1137. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FAM20C MUTATED | 1 | 1 | 2 |
FAM20C WILD-TYPE | 269 | 412 | 272 |
P value = 0.643 (Fisher's exact test), Q value = 1
Table S1138. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FAM20C MUTATED | 0 | 0 | 3 | 1 | 0 |
FAM20C WILD-TYPE | 152 | 174 | 387 | 124 | 116 |
P value = 0.292 (Fisher's exact test), Q value = 1
Table S1139. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
FAM20C MUTATED | 1 | 0 | 2 |
FAM20C WILD-TYPE | 247 | 217 | 185 |
P value = 0.357 (Fisher's exact test), Q value = 1
Table S1140. Gene #103: 'FAM20C MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
FAM20C MUTATED | 1 | 1 | 0 | 1 | 0 | 0 |
FAM20C WILD-TYPE | 114 | 62 | 189 | 116 | 108 | 60 |
P value = 0.717 (Fisher's exact test), Q value = 1
Table S1141. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RCC1 MUTATED | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 |
RCC1 WILD-TYPE | 21 | 38 | 113 | 95 | 108 | 73 | 19 | 39 |
P value = 0.111 (Fisher's exact test), Q value = 1
Table S1142. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RCC1 MUTATED | 1 | 0 | 0 | 2 | 0 |
RCC1 WILD-TYPE | 95 | 152 | 116 | 87 | 56 |
P value = 0.197 (Fisher's exact test), Q value = 1
Table S1143. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RCC1 MUTATED | 1 | 0 | 0 | 1 | 1 |
RCC1 WILD-TYPE | 366 | 226 | 91 | 240 | 36 |
P value = 0.441 (Fisher's exact test), Q value = 1
Table S1144. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RCC1 MUTATED | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
RCC1 WILD-TYPE | 177 | 135 | 215 | 156 | 224 | 48 | 15 |
P value = 0.417 (Fisher's exact test), Q value = 1
Table S1145. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RCC1 MUTATED | 2 | 1 | 0 | 0 | 0 | 0 |
RCC1 WILD-TYPE | 166 | 221 | 188 | 172 | 171 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1146. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RCC1 MUTATED | 1 | 1 | 1 |
RCC1 WILD-TYPE | 269 | 412 | 273 |
P value = 0.402 (Fisher's exact test), Q value = 1
Table S1147. Gene #104: 'RCC1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RCC1 MUTATED | 1 | 0 | 1 | 0 | 1 |
RCC1 WILD-TYPE | 151 | 174 | 389 | 125 | 115 |
P value = 0.787 (Fisher's exact test), Q value = 1
Table S1148. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SPTAN1 MUTATED | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 0 |
SPTAN1 WILD-TYPE | 21 | 38 | 114 | 95 | 106 | 72 | 19 | 39 |
P value = 0.644 (Fisher's exact test), Q value = 1
Table S1149. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SPTAN1 MUTATED | 0 | 2 | 1 | 2 | 0 |
SPTAN1 WILD-TYPE | 96 | 150 | 115 | 87 | 56 |
P value = 0.624 (Fisher's exact test), Q value = 1
Table S1150. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SPTAN1 MUTATED | 2 | 3 | 1 | 4 | 0 |
SPTAN1 WILD-TYPE | 365 | 223 | 90 | 237 | 37 |
P value = 0.784 (Fisher's exact test), Q value = 1
Table S1151. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SPTAN1 MUTATED | 2 | 1 | 3 | 1 | 2 |
SPTAN1 WILD-TYPE | 114 | 180 | 154 | 82 | 109 |
P value = 0.113 (Fisher's exact test), Q value = 1
Table S1152. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SPTAN1 MUTATED | 3 | 0 | 0 |
SPTAN1 WILD-TYPE | 143 | 129 | 118 |
P value = 0.0494 (Fisher's exact test), Q value = 1
Table S1153. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SPTAN1 MUTATED | 0 | 0 | 2 | 0 | 1 |
SPTAN1 WILD-TYPE | 59 | 109 | 88 | 104 | 30 |
Figure S158. Get High-res Image Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D105V6.png)
P value = 0.115 (Fisher's exact test), Q value = 1
Table S1154. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SPTAN1 MUTATED | 4 | 1 | 1 | 4 | 0 | 0 | 0 |
SPTAN1 WILD-TYPE | 175 | 134 | 214 | 152 | 225 | 48 | 15 |
P value = 0.122 (Fisher's exact test), Q value = 1
Table S1155. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SPTAN1 MUTATED | 4 | 1 | 0 | 3 | 1 | 1 |
SPTAN1 WILD-TYPE | 164 | 221 | 188 | 169 | 170 | 51 |
P value = 0.0927 (Fisher's exact test), Q value = 1
Table S1156. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SPTAN1 MUTATED | 0 | 7 | 4 |
SPTAN1 WILD-TYPE | 270 | 406 | 270 |
P value = 0.445 (Fisher's exact test), Q value = 1
Table S1157. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SPTAN1 MUTATED | 0 | 2 | 5 | 3 | 1 |
SPTAN1 WILD-TYPE | 152 | 172 | 385 | 122 | 115 |
P value = 0.13 (Fisher's exact test), Q value = 1
Table S1158. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SPTAN1 MUTATED | 2 | 1 | 5 |
SPTAN1 WILD-TYPE | 246 | 216 | 182 |
P value = 0.265 (Fisher's exact test), Q value = 1
Table S1159. Gene #105: 'SPTAN1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SPTAN1 MUTATED | 4 | 0 | 2 | 1 | 0 | 1 |
SPTAN1 WILD-TYPE | 111 | 63 | 187 | 116 | 108 | 59 |
P value = 0.231 (Fisher's exact test), Q value = 1
Table S1160. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CHD4 MUTATED | 0 | 2 | 0 | 2 | 2 | 1 | 1 | 1 |
CHD4 WILD-TYPE | 21 | 36 | 114 | 95 | 106 | 72 | 18 | 38 |
P value = 0.356 (Fisher's exact test), Q value = 1
Table S1161. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CHD4 MUTATED | 0 | 5 | 2 | 2 | 0 |
CHD4 WILD-TYPE | 96 | 147 | 114 | 87 | 56 |
P value = 0.458 (Fisher's exact test), Q value = 1
Table S1162. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CHD4 MUTATED | 11 | 2 | 2 | 4 | 0 |
CHD4 WILD-TYPE | 356 | 224 | 89 | 237 | 37 |
P value = 0.0819 (Fisher's exact test), Q value = 1
Table S1163. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CHD4 MUTATED | 1 | 1 | 5 | 4 | 4 |
CHD4 WILD-TYPE | 115 | 180 | 152 | 79 | 107 |
P value = 0.195 (Fisher's exact test), Q value = 1
Table S1164. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CHD4 MUTATED | 3 | 0 | 3 |
CHD4 WILD-TYPE | 143 | 129 | 115 |
P value = 0.621 (Fisher's exact test), Q value = 1
Table S1165. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CHD4 MUTATED | 0 | 2 | 2 | 1 | 1 |
CHD4 WILD-TYPE | 59 | 107 | 88 | 103 | 30 |
P value = 0.0322 (Fisher's exact test), Q value = 1
Table S1166. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CHD4 MUTATED | 3 | 5 | 6 | 4 | 0 | 0 | 1 |
CHD4 WILD-TYPE | 176 | 130 | 209 | 152 | 225 | 48 | 14 |
Figure S159. Get High-res Image Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D106V7.png)
P value = 0.157 (Fisher's exact test), Q value = 1
Table S1167. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CHD4 MUTATED | 3 | 6 | 4 | 6 | 0 | 0 |
CHD4 WILD-TYPE | 165 | 216 | 184 | 166 | 171 | 52 |
P value = 0.167 (Fisher's exact test), Q value = 1
Table S1168. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CHD4 MUTATED | 9 | 7 | 3 |
CHD4 WILD-TYPE | 261 | 406 | 271 |
P value = 0.0908 (Fisher's exact test), Q value = 1
Table S1169. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CHD4 MUTATED | 7 | 3 | 6 | 3 | 0 |
CHD4 WILD-TYPE | 145 | 171 | 384 | 122 | 116 |
P value = 0.47 (Fisher's exact test), Q value = 1
Table S1170. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CHD4 MUTATED | 4 | 6 | 2 |
CHD4 WILD-TYPE | 244 | 211 | 185 |
P value = 0.106 (Fisher's exact test), Q value = 1
Table S1171. Gene #106: 'CHD4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CHD4 MUTATED | 1 | 1 | 5 | 0 | 5 | 0 |
CHD4 WILD-TYPE | 114 | 62 | 184 | 117 | 103 | 60 |
P value = 0.396 (Fisher's exact test), Q value = 1
Table S1172. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZFP36L2 MUTATED | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 |
ZFP36L2 WILD-TYPE | 21 | 38 | 113 | 96 | 108 | 72 | 18 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1173. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZFP36L2 MUTATED | 1 | 1 | 1 | 1 | 0 |
ZFP36L2 WILD-TYPE | 95 | 151 | 115 | 88 | 56 |
P value = 0.0444 (Fisher's exact test), Q value = 1
Table S1174. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZFP36L2 MUTATED | 1 | 1 | 1 | 2 | 2 |
ZFP36L2 WILD-TYPE | 366 | 225 | 90 | 239 | 35 |
Figure S160. Get High-res Image Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D107V3.png)
P value = 0.543 (Fisher's exact test), Q value = 1
Table S1175. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZFP36L2 MUTATED | 1 | 1 | 3 | 0 | 0 |
ZFP36L2 WILD-TYPE | 115 | 180 | 154 | 83 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1176. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ZFP36L2 MUTATED | 1 | 1 | 1 |
ZFP36L2 WILD-TYPE | 145 | 128 | 117 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1177. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ZFP36L2 MUTATED | 0 | 1 | 1 | 1 | 0 |
ZFP36L2 WILD-TYPE | 59 | 108 | 89 | 103 | 31 |
P value = 0.895 (Fisher's exact test), Q value = 1
Table S1178. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZFP36L2 MUTATED | 1 | 0 | 2 | 2 | 2 | 0 | 0 |
ZFP36L2 WILD-TYPE | 178 | 135 | 213 | 154 | 223 | 48 | 15 |
P value = 0.385 (Fisher's exact test), Q value = 1
Table S1179. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZFP36L2 MUTATED | 1 | 0 | 1 | 3 | 2 | 0 |
ZFP36L2 WILD-TYPE | 167 | 222 | 187 | 169 | 169 | 52 |
P value = 0.804 (Fisher's exact test), Q value = 1
Table S1180. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZFP36L2 MUTATED | 2 | 4 | 1 |
ZFP36L2 WILD-TYPE | 268 | 409 | 273 |
P value = 0.973 (Fisher's exact test), Q value = 1
Table S1181. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZFP36L2 MUTATED | 1 | 1 | 4 | 1 | 0 |
ZFP36L2 WILD-TYPE | 151 | 173 | 386 | 124 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1182. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZFP36L2 MUTATED | 2 | 2 | 1 |
ZFP36L2 WILD-TYPE | 246 | 215 | 186 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1183. Gene #107: 'ZFP36L2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZFP36L2 MUTATED | 1 | 0 | 2 | 1 | 1 | 0 |
ZFP36L2 WILD-TYPE | 114 | 63 | 187 | 116 | 107 | 60 |
P value = 0.285 (Fisher's exact test), Q value = 1
Table S1184. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
STAG2 MUTATED | 0 | 0 | 0 | 1 | 3 | 2 | 1 | 0 |
STAG2 WILD-TYPE | 21 | 38 | 114 | 96 | 105 | 71 | 18 | 39 |
P value = 0.211 (Fisher's exact test), Q value = 1
Table S1185. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
STAG2 MUTATED | 0 | 1 | 3 | 1 | 2 |
STAG2 WILD-TYPE | 96 | 151 | 113 | 88 | 54 |
P value = 0.216 (Fisher's exact test), Q value = 1
Table S1186. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
STAG2 MUTATED | 5 | 2 | 0 | 4 | 2 |
STAG2 WILD-TYPE | 362 | 224 | 91 | 237 | 35 |
P value = 0.199 (Fisher's exact test), Q value = 1
Table S1187. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
STAG2 MUTATED | 2 | 2 | 5 | 0 | 0 |
STAG2 WILD-TYPE | 114 | 179 | 152 | 83 | 111 |
P value = 0.878 (Fisher's exact test), Q value = 1
Table S1188. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
STAG2 MUTATED | 3 | 2 | 1 |
STAG2 WILD-TYPE | 143 | 127 | 117 |
P value = 0.202 (Fisher's exact test), Q value = 1
Table S1189. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
STAG2 MUTATED | 2 | 1 | 2 | 0 | 1 |
STAG2 WILD-TYPE | 57 | 108 | 88 | 104 | 30 |
P value = 0.193 (Fisher's exact test), Q value = 1
Table S1190. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
STAG2 MUTATED | 2 | 0 | 3 | 4 | 2 | 1 | 1 |
STAG2 WILD-TYPE | 177 | 135 | 212 | 152 | 223 | 47 | 14 |
P value = 0.137 (Fisher's exact test), Q value = 1
Table S1191. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
STAG2 MUTATED | 2 | 0 | 3 | 5 | 2 | 1 |
STAG2 WILD-TYPE | 166 | 222 | 185 | 167 | 169 | 51 |
P value = 0.22 (Fisher's exact test), Q value = 1
Table S1192. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
STAG2 MUTATED | 1 | 8 | 4 |
STAG2 WILD-TYPE | 269 | 405 | 270 |
P value = 0.929 (Fisher's exact test), Q value = 1
Table S1193. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
STAG2 MUTATED | 1 | 2 | 6 | 2 | 2 |
STAG2 WILD-TYPE | 151 | 172 | 384 | 123 | 114 |
P value = 0.51 (Fisher's exact test), Q value = 1
Table S1194. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
STAG2 MUTATED | 4 | 1 | 2 |
STAG2 WILD-TYPE | 244 | 216 | 185 |
P value = 0.845 (Fisher's exact test), Q value = 1
Table S1195. Gene #108: 'STAG2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
STAG2 MUTATED | 2 | 1 | 1 | 1 | 1 | 1 |
STAG2 WILD-TYPE | 113 | 62 | 188 | 116 | 107 | 59 |
P value = 0.374 (Fisher's exact test), Q value = 1
Table S1196. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HIST1H2BC MUTATED | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 |
HIST1H2BC WILD-TYPE | 21 | 38 | 114 | 96 | 107 | 72 | 18 | 39 |
P value = 0.0461 (Fisher's exact test), Q value = 1
Table S1197. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HIST1H2BC MUTATED | 0 | 0 | 3 | 0 | 1 |
HIST1H2BC WILD-TYPE | 96 | 152 | 113 | 89 | 55 |
Figure S161. Get High-res Image Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D109V2.png)
P value = 0.786 (Fisher's exact test), Q value = 1
Table S1198. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HIST1H2BC MUTATED | 2 | 1 | 1 | 2 | 0 |
HIST1H2BC WILD-TYPE | 365 | 225 | 90 | 239 | 37 |
P value = 0.349 (Fisher's exact test), Q value = 1
Table S1199. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HIST1H2BC MUTATED | 0 | 0 | 2 | 0 | 1 |
HIST1H2BC WILD-TYPE | 116 | 181 | 155 | 83 | 110 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S1200. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
HIST1H2BC MUTATED | 3 | 1 | 0 |
HIST1H2BC WILD-TYPE | 143 | 128 | 118 |
P value = 0.244 (Fisher's exact test), Q value = 1
Table S1201. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
HIST1H2BC MUTATED | 0 | 0 | 1 | 2 | 1 |
HIST1H2BC WILD-TYPE | 59 | 109 | 89 | 102 | 30 |
P value = 0.322 (Fisher's exact test), Q value = 1
Table S1202. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HIST1H2BC MUTATED | 1 | 1 | 1 | 1 | 1 | 0 | 1 |
HIST1H2BC WILD-TYPE | 178 | 134 | 214 | 155 | 224 | 48 | 14 |
P value = 0.553 (Fisher's exact test), Q value = 1
Table S1203. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HIST1H2BC MUTATED | 1 | 1 | 1 | 3 | 0 | 0 |
HIST1H2BC WILD-TYPE | 167 | 221 | 187 | 169 | 171 | 52 |
P value = 0.886 (Fisher's exact test), Q value = 1
Table S1204. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HIST1H2BC MUTATED | 2 | 3 | 1 |
HIST1H2BC WILD-TYPE | 268 | 410 | 273 |
P value = 0.514 (Fisher's exact test), Q value = 1
Table S1205. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HIST1H2BC MUTATED | 2 | 0 | 3 | 0 | 1 |
HIST1H2BC WILD-TYPE | 150 | 174 | 387 | 125 | 115 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1206. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HIST1H2BC MUTATED | 2 | 2 | 1 |
HIST1H2BC WILD-TYPE | 246 | 215 | 186 |
P value = 0.443 (Fisher's exact test), Q value = 1
Table S1207. Gene #109: 'HIST1H2BC MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HIST1H2BC MUTATED | 0 | 1 | 2 | 0 | 1 | 1 |
HIST1H2BC WILD-TYPE | 115 | 62 | 187 | 117 | 107 | 59 |
P value = 0.471 (Fisher's exact test), Q value = 1
Table S1208. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
BPHL MUTATED | 0 | 0 | 1 | 0 | 2 | 1 | 1 | 0 |
BPHL WILD-TYPE | 21 | 38 | 113 | 97 | 106 | 72 | 18 | 39 |
P value = 0.468 (Fisher's exact test), Q value = 1
Table S1209. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
BPHL MUTATED | 0 | 3 | 1 | 0 | 1 |
BPHL WILD-TYPE | 96 | 149 | 115 | 89 | 55 |
P value = 0.686 (Fisher's exact test), Q value = 1
Table S1210. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
BPHL MUTATED | 1 | 1 | 1 | 2 | 0 |
BPHL WILD-TYPE | 366 | 225 | 90 | 239 | 37 |
P value = 0.691 (Fisher's exact test), Q value = 1
Table S1211. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
BPHL MUTATED | 1 | 1 | 2 |
BPHL WILD-TYPE | 145 | 128 | 116 |
P value = 0.464 (Fisher's exact test), Q value = 1
Table S1212. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
BPHL MUTATED | 1 | 1 | 0 | 1 | 1 |
BPHL WILD-TYPE | 58 | 108 | 90 | 103 | 30 |
P value = 0.117 (Fisher's exact test), Q value = 1
Table S1213. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
BPHL MUTATED | 0 | 0 | 2 | 1 | 1 | 0 | 1 |
BPHL WILD-TYPE | 179 | 135 | 213 | 155 | 224 | 48 | 14 |
P value = 0.172 (Fisher's exact test), Q value = 1
Table S1214. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
BPHL MUTATED | 0 | 0 | 1 | 2 | 1 | 1 |
BPHL WILD-TYPE | 168 | 222 | 187 | 170 | 170 | 51 |
P value = 0.285 (Fisher's exact test), Q value = 1
Table S1215. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
BPHL MUTATED | 0 | 4 | 1 |
BPHL WILD-TYPE | 270 | 409 | 273 |
P value = 0.855 (Fisher's exact test), Q value = 1
Table S1216. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
BPHL MUTATED | 0 | 1 | 3 | 0 | 1 |
BPHL WILD-TYPE | 152 | 173 | 387 | 125 | 115 |
P value = 0.509 (Fisher's exact test), Q value = 1
Table S1217. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
BPHL MUTATED | 2 | 0 | 1 |
BPHL WILD-TYPE | 246 | 217 | 186 |
P value = 0.381 (Fisher's exact test), Q value = 1
Table S1218. Gene #110: 'BPHL MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
BPHL MUTATED | 0 | 0 | 2 | 0 | 0 | 1 |
BPHL WILD-TYPE | 115 | 63 | 187 | 117 | 108 | 59 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1219. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ATP2A1 MUTATED | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 |
ATP2A1 WILD-TYPE | 21 | 38 | 113 | 96 | 107 | 73 | 19 | 39 |
P value = 0.683 (Fisher's exact test), Q value = 1
Table S1220. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ATP2A1 MUTATED | 0 | 2 | 0 | 1 | 0 |
ATP2A1 WILD-TYPE | 96 | 150 | 116 | 88 | 56 |
P value = 0.837 (Fisher's exact test), Q value = 1
Table S1221. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ATP2A1 MUTATED | 3 | 4 | 1 | 3 | 0 |
ATP2A1 WILD-TYPE | 364 | 222 | 90 | 238 | 37 |
P value = 0.735 (Fisher's exact test), Q value = 1
Table S1222. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ATP2A1 MUTATED | 2 | 3 | 3 | 1 | 0 |
ATP2A1 WILD-TYPE | 114 | 178 | 154 | 82 | 111 |
P value = 0.714 (Fisher's exact test), Q value = 1
Table S1223. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ATP2A1 MUTATED | 2 | 1 | 1 | 1 | 4 | 1 | 0 |
ATP2A1 WILD-TYPE | 177 | 134 | 214 | 155 | 221 | 47 | 15 |
P value = 0.332 (Fisher's exact test), Q value = 1
Table S1224. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ATP2A1 MUTATED | 2 | 3 | 0 | 4 | 1 | 0 |
ATP2A1 WILD-TYPE | 166 | 219 | 188 | 168 | 170 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1225. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ATP2A1 MUTATED | 3 | 5 | 3 |
ATP2A1 WILD-TYPE | 267 | 408 | 271 |
P value = 0.901 (Fisher's exact test), Q value = 1
Table S1226. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ATP2A1 MUTATED | 2 | 1 | 5 | 1 | 2 |
ATP2A1 WILD-TYPE | 150 | 173 | 385 | 124 | 114 |
P value = 0.548 (Fisher's exact test), Q value = 1
Table S1227. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ATP2A1 MUTATED | 3 | 4 | 1 |
ATP2A1 WILD-TYPE | 245 | 213 | 186 |
P value = 0.949 (Fisher's exact test), Q value = 1
Table S1228. Gene #111: 'ATP2A1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ATP2A1 MUTATED | 1 | 1 | 3 | 1 | 2 | 0 |
ATP2A1 WILD-TYPE | 114 | 62 | 186 | 116 | 106 | 60 |
P value = 0.0364 (Fisher's exact test), Q value = 1
Table S1229. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
LRRC37A3 MUTATED | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 1 |
LRRC37A3 WILD-TYPE | 21 | 36 | 114 | 97 | 108 | 72 | 19 | 38 |
Figure S162. Get High-res Image Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D112V1.png)
P value = 0.553 (Fisher's exact test), Q value = 1
Table S1230. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
LRRC37A3 MUTATED | 0 | 3 | 1 | 0 | 0 |
LRRC37A3 WILD-TYPE | 96 | 149 | 115 | 89 | 56 |
P value = 0.938 (Fisher's exact test), Q value = 1
Table S1231. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
LRRC37A3 MUTATED | 3 | 3 | 1 | 3 | 0 |
LRRC37A3 WILD-TYPE | 364 | 223 | 90 | 238 | 37 |
P value = 0.885 (Fisher's exact test), Q value = 1
Table S1232. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
LRRC37A3 MUTATED | 2 | 2 | 1 | 1 | 2 |
LRRC37A3 WILD-TYPE | 114 | 179 | 156 | 82 | 109 |
P value = 0.399 (Fisher's exact test), Q value = 1
Table S1233. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
LRRC37A3 MUTATED | 1 | 0 | 2 |
LRRC37A3 WILD-TYPE | 145 | 129 | 116 |
P value = 0.771 (Fisher's exact test), Q value = 1
Table S1234. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
LRRC37A3 MUTATED | 0 | 1 | 0 | 2 | 0 |
LRRC37A3 WILD-TYPE | 59 | 108 | 90 | 102 | 31 |
P value = 0.176 (Fisher's exact test), Q value = 1
Table S1235. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
LRRC37A3 MUTATED | 3 | 2 | 1 | 1 | 1 | 1 | 1 |
LRRC37A3 WILD-TYPE | 176 | 133 | 214 | 155 | 224 | 47 | 14 |
P value = 0.452 (Fisher's exact test), Q value = 1
Table S1236. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
LRRC37A3 MUTATED | 3 | 4 | 1 | 2 | 0 | 0 |
LRRC37A3 WILD-TYPE | 165 | 218 | 187 | 170 | 171 | 52 |
P value = 0.559 (Fisher's exact test), Q value = 1
Table S1237. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
LRRC37A3 MUTATED | 4 | 3 | 3 |
LRRC37A3 WILD-TYPE | 266 | 410 | 271 |
P value = 0.606 (Fisher's exact test), Q value = 1
Table S1238. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
LRRC37A3 MUTATED | 1 | 2 | 3 | 3 | 1 |
LRRC37A3 WILD-TYPE | 151 | 172 | 387 | 122 | 115 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S1239. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
LRRC37A3 MUTATED | 1 | 2 | 3 |
LRRC37A3 WILD-TYPE | 247 | 215 | 184 |
P value = 0.0676 (Fisher's exact test), Q value = 1
Table S1240. Gene #112: 'LRRC37A3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
LRRC37A3 MUTATED | 3 | 0 | 0 | 0 | 2 | 1 |
LRRC37A3 WILD-TYPE | 112 | 63 | 189 | 117 | 106 | 59 |
P value = 0.314 (Fisher's exact test), Q value = 1
Table S1241. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
EPDR1 MUTATED | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 0 |
EPDR1 WILD-TYPE | 21 | 37 | 113 | 97 | 108 | 71 | 19 | 39 |
P value = 0.823 (Fisher's exact test), Q value = 1
Table S1242. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
EPDR1 MUTATED | 1 | 1 | 2 | 0 | 0 |
EPDR1 WILD-TYPE | 95 | 151 | 114 | 89 | 56 |
P value = 0.686 (Fisher's exact test), Q value = 1
Table S1243. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
EPDR1 MUTATED | 1 | 1 | 1 | 2 | 0 |
EPDR1 WILD-TYPE | 366 | 225 | 90 | 239 | 37 |
P value = 0.555 (Fisher's exact test), Q value = 1
Table S1244. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
EPDR1 MUTATED | 2 | 2 | 0 |
EPDR1 WILD-TYPE | 144 | 127 | 118 |
P value = 0.133 (Fisher's exact test), Q value = 1
Table S1245. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
EPDR1 MUTATED | 1 | 0 | 0 | 2 | 1 |
EPDR1 WILD-TYPE | 58 | 109 | 90 | 102 | 30 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S1246. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
EPDR1 MUTATED | 0 | 1 | 0 | 3 | 1 | 0 | 0 |
EPDR1 WILD-TYPE | 179 | 134 | 215 | 153 | 224 | 48 | 15 |
P value = 0.626 (Fisher's exact test), Q value = 1
Table S1247. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
EPDR1 MUTATED | 0 | 1 | 1 | 1 | 1 | 1 |
EPDR1 WILD-TYPE | 168 | 221 | 187 | 171 | 170 | 51 |
P value = 0.82 (Fisher's exact test), Q value = 1
Table S1248. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
EPDR1 MUTATED | 1 | 1 | 2 |
EPDR1 WILD-TYPE | 269 | 412 | 272 |
P value = 0.718 (Fisher's exact test), Q value = 1
Table S1249. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
EPDR1 MUTATED | 1 | 0 | 2 | 0 | 1 |
EPDR1 WILD-TYPE | 151 | 174 | 388 | 125 | 115 |
P value = 0.383 (Fisher's exact test), Q value = 1
Table S1250. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
EPDR1 MUTATED | 0 | 2 | 1 |
EPDR1 WILD-TYPE | 248 | 215 | 186 |
P value = 0.0971 (Fisher's exact test), Q value = 1
Table S1251. Gene #113: 'EPDR1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
EPDR1 MUTATED | 0 | 0 | 0 | 2 | 0 | 1 |
EPDR1 WILD-TYPE | 115 | 63 | 189 | 115 | 108 | 59 |
P value = 0.0106 (Fisher's exact test), Q value = 1
Table S1252. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
EXOC4 MUTATED | 0 | 2 | 0 | 0 | 0 | 1 | 1 | 0 |
EXOC4 WILD-TYPE | 21 | 36 | 114 | 97 | 108 | 72 | 18 | 39 |
Figure S163. Get High-res Image Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D114V1.png)
P value = 0.658 (Fisher's exact test), Q value = 1
Table S1253. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
EXOC4 MUTATED | 0 | 2 | 2 | 0 | 0 |
EXOC4 WILD-TYPE | 96 | 150 | 114 | 89 | 56 |
P value = 0.347 (Fisher's exact test), Q value = 1
Table S1254. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
EXOC4 MUTATED | 1 | 2 | 1 | 4 | 0 |
EXOC4 WILD-TYPE | 366 | 224 | 90 | 237 | 37 |
P value = 0.0754 (Fisher's exact test), Q value = 1
Table S1255. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
EXOC4 MUTATED | 0 | 0 | 4 | 1 | 2 |
EXOC4 WILD-TYPE | 116 | 181 | 153 | 82 | 109 |
P value = 0.0116 (Fisher's exact test), Q value = 1
Table S1256. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
EXOC4 MUTATED | 0 | 2 | 0 | 4 | 1 | 0 | 1 |
EXOC4 WILD-TYPE | 179 | 133 | 215 | 152 | 224 | 48 | 14 |
Figure S164. Get High-res Image Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D114V7.png)
P value = 0.0146 (Fisher's exact test), Q value = 1
Table S1257. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
EXOC4 MUTATED | 0 | 3 | 0 | 3 | 0 | 2 |
EXOC4 WILD-TYPE | 168 | 219 | 188 | 169 | 171 | 50 |
Figure S165. Get High-res Image Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D114V8.png)
P value = 0.492 (Fisher's exact test), Q value = 1
Table S1258. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
EXOC4 MUTATED | 3 | 2 | 3 |
EXOC4 WILD-TYPE | 267 | 411 | 271 |
P value = 0.589 (Fisher's exact test), Q value = 1
Table S1259. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
EXOC4 MUTATED | 2 | 1 | 3 | 0 | 2 |
EXOC4 WILD-TYPE | 150 | 173 | 387 | 125 | 114 |
P value = 0.395 (Fisher's exact test), Q value = 1
Table S1260. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
EXOC4 MUTATED | 1 | 2 | 3 |
EXOC4 WILD-TYPE | 247 | 215 | 184 |
P value = 0.152 (Fisher's exact test), Q value = 1
Table S1261. Gene #114: 'EXOC4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
EXOC4 MUTATED | 0 | 0 | 2 | 0 | 2 | 2 |
EXOC4 WILD-TYPE | 115 | 63 | 187 | 117 | 106 | 58 |
P value = 0.166 (Fisher's exact test), Q value = 1
Table S1262. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
C11ORF49 MUTATED | 2 | 0 | 1 | 1 | 1 |
C11ORF49 WILD-TYPE | 365 | 226 | 90 | 240 | 36 |
P value = 0.382 (Fisher's exact test), Q value = 1
Table S1263. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
C11ORF49 MUTATED | 2 | 0 | 1 | 0 | 1 |
C11ORF49 WILD-TYPE | 114 | 181 | 156 | 83 | 110 |
P value = 0.116 (Fisher's exact test), Q value = 1
Table S1264. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
C11ORF49 MUTATED | 3 | 0 | 0 | 2 | 0 | 0 | 0 |
C11ORF49 WILD-TYPE | 176 | 135 | 215 | 154 | 225 | 48 | 15 |
P value = 0.027 (Fisher's exact test), Q value = 1
Table S1265. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
C11ORF49 MUTATED | 3 | 0 | 0 | 1 | 0 | 1 |
C11ORF49 WILD-TYPE | 165 | 222 | 188 | 171 | 171 | 51 |
Figure S166. Get High-res Image Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D115V8.png)
P value = 0.0507 (Fisher's exact test), Q value = 1
Table S1266. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
C11ORF49 MUTATED | 0 | 1 | 4 |
C11ORF49 WILD-TYPE | 270 | 412 | 270 |
P value = 0.0928 (Fisher's exact test), Q value = 1
Table S1267. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
C11ORF49 MUTATED | 0 | 0 | 2 | 3 | 0 |
C11ORF49 WILD-TYPE | 152 | 174 | 388 | 122 | 116 |
P value = 0.0065 (Fisher's exact test), Q value = 1
Table S1268. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
C11ORF49 MUTATED | 0 | 0 | 4 |
C11ORF49 WILD-TYPE | 248 | 217 | 183 |
Figure S167. Get High-res Image Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D115V11.png)
P value = 0.218 (Fisher's exact test), Q value = 1
Table S1269. Gene #115: 'C11ORF49 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
C11ORF49 MUTATED | 3 | 0 | 1 | 0 | 0 | 0 |
C11ORF49 WILD-TYPE | 112 | 63 | 188 | 117 | 108 | 60 |
P value = 0.286 (Fisher's exact test), Q value = 1
Table S1270. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ACTG1 MUTATED | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 |
ACTG1 WILD-TYPE | 21 | 37 | 114 | 97 | 106 | 73 | 19 | 39 |
P value = 0.39 (Fisher's exact test), Q value = 1
Table S1271. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ACTG1 MUTATED | 0 | 2 | 0 | 0 | 1 |
ACTG1 WILD-TYPE | 96 | 150 | 116 | 89 | 55 |
P value = 0.958 (Fisher's exact test), Q value = 1
Table S1272. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ACTG1 MUTATED | 3 | 1 | 1 | 2 | 0 |
ACTG1 WILD-TYPE | 364 | 225 | 90 | 239 | 37 |
P value = 0.0416 (Fisher's exact test), Q value = 1
Table S1273. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ACTG1 MUTATED | 3 | 0 | 1 | 2 | 0 |
ACTG1 WILD-TYPE | 113 | 181 | 156 | 81 | 111 |
Figure S168. Get High-res Image Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D116V4.png)
P value = 0.588 (Fisher's exact test), Q value = 1
Table S1274. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ACTG1 MUTATED | 3 | 2 | 2 | 0 | 1 | 0 | 0 |
ACTG1 WILD-TYPE | 176 | 133 | 213 | 156 | 224 | 48 | 15 |
P value = 0.5 (Fisher's exact test), Q value = 1
Table S1275. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ACTG1 MUTATED | 3 | 1 | 2 | 0 | 2 | 0 |
ACTG1 WILD-TYPE | 165 | 221 | 186 | 172 | 169 | 52 |
P value = 0.819 (Fisher's exact test), Q value = 1
Table S1276. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ACTG1 MUTATED | 3 | 3 | 2 |
ACTG1 WILD-TYPE | 267 | 410 | 272 |
P value = 0.0818 (Fisher's exact test), Q value = 1
Table S1277. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ACTG1 MUTATED | 2 | 2 | 1 | 3 | 0 |
ACTG1 WILD-TYPE | 150 | 172 | 389 | 122 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1278. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ACTG1 MUTATED | 2 | 2 | 2 |
ACTG1 WILD-TYPE | 246 | 215 | 185 |
P value = 0.114 (Fisher's exact test), Q value = 1
Table S1279. Gene #116: 'ACTG1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ACTG1 MUTATED | 2 | 1 | 0 | 0 | 2 | 1 |
ACTG1 WILD-TYPE | 113 | 62 | 189 | 117 | 106 | 59 |
P value = 0.671 (Fisher's exact test), Q value = 1
Table S1280. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ANXA11 MUTATED | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 |
ANXA11 WILD-TYPE | 21 | 38 | 113 | 97 | 107 | 73 | 19 | 38 |
P value = 0.499 (Fisher's exact test), Q value = 1
Table S1281. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ANXA11 MUTATED | 1 | 1 | 0 | 0 | 1 |
ANXA11 WILD-TYPE | 95 | 151 | 116 | 89 | 55 |
P value = 0.463 (Fisher's exact test), Q value = 1
Table S1282. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ANXA11 MUTATED | 1 | 0 | 1 | 1 | 0 |
ANXA11 WILD-TYPE | 366 | 226 | 90 | 240 | 37 |
P value = 0.0617 (Fisher's exact test), Q value = 1
Table S1283. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ANXA11 MUTATED | 0 | 3 | 0 |
ANXA11 WILD-TYPE | 146 | 126 | 118 |
P value = 0.898 (Fisher's exact test), Q value = 1
Table S1284. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ANXA11 MUTATED | 1 | 1 | 0 | 1 | 0 |
ANXA11 WILD-TYPE | 58 | 108 | 90 | 103 | 31 |
P value = 0.303 (Fisher's exact test), Q value = 1
Table S1285. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ANXA11 MUTATED | 0 | 0 | 1 | 0 | 1 | 1 | 0 |
ANXA11 WILD-TYPE | 179 | 135 | 214 | 156 | 224 | 47 | 15 |
P value = 0.953 (Fisher's exact test), Q value = 1
Table S1286. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ANXA11 MUTATED | 0 | 1 | 1 | 0 | 1 | 0 |
ANXA11 WILD-TYPE | 168 | 221 | 187 | 172 | 170 | 52 |
P value = 0.632 (Fisher's exact test), Q value = 1
Table S1287. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ANXA11 MUTATED | 1 | 2 | 0 |
ANXA11 WILD-TYPE | 269 | 411 | 274 |
P value = 0.757 (Fisher's exact test), Q value = 1
Table S1288. Gene #117: 'ANXA11 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ANXA11 MUTATED | 0 | 0 | 3 | 0 | 0 |
ANXA11 WILD-TYPE | 152 | 174 | 387 | 125 | 116 |
P value = 0.407 (Fisher's exact test), Q value = 1
Table S1289. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PFKP MUTATED | 0 | 0 | 3 | 3 | 0 | 0 | 0 | 0 |
PFKP WILD-TYPE | 21 | 38 | 111 | 94 | 108 | 73 | 19 | 39 |
P value = 0.013 (Fisher's exact test), Q value = 1
Table S1290. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PFKP MUTATED | 3 | 0 | 0 | 3 | 0 |
PFKP WILD-TYPE | 93 | 152 | 116 | 86 | 56 |
Figure S169. Get High-res Image Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D118V2.png)
P value = 0.229 (Fisher's exact test), Q value = 1
Table S1291. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PFKP MUTATED | 1 | 2 | 0 | 3 | 1 |
PFKP WILD-TYPE | 366 | 224 | 91 | 238 | 36 |
P value = 0.698 (Fisher's exact test), Q value = 1
Table S1292. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PFKP MUTATED | 0 | 1 | 2 | 0 | 0 |
PFKP WILD-TYPE | 116 | 180 | 155 | 83 | 111 |
P value = 0.282 (Fisher's exact test), Q value = 1
Table S1293. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
PFKP MUTATED | 3 | 0 | 2 |
PFKP WILD-TYPE | 143 | 129 | 116 |
P value = 0.227 (Fisher's exact test), Q value = 1
Table S1294. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
PFKP MUTATED | 0 | 0 | 3 | 2 | 0 |
PFKP WILD-TYPE | 59 | 109 | 87 | 102 | 31 |
P value = 0.473 (Fisher's exact test), Q value = 1
Table S1295. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PFKP MUTATED | 3 | 0 | 1 | 0 | 3 | 0 | 0 |
PFKP WILD-TYPE | 176 | 135 | 214 | 156 | 222 | 48 | 15 |
P value = 0.365 (Fisher's exact test), Q value = 1
Table S1296. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PFKP MUTATED | 3 | 0 | 1 | 1 | 2 | 0 |
PFKP WILD-TYPE | 165 | 222 | 187 | 171 | 169 | 52 |
P value = 0.376 (Fisher's exact test), Q value = 1
Table S1297. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PFKP MUTATED | 1 | 2 | 4 |
PFKP WILD-TYPE | 269 | 411 | 270 |
P value = 0.0979 (Fisher's exact test), Q value = 1
Table S1298. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PFKP MUTATED | 0 | 0 | 4 | 3 | 0 |
PFKP WILD-TYPE | 152 | 174 | 386 | 122 | 116 |
P value = 0.289 (Fisher's exact test), Q value = 1
Table S1299. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PFKP MUTATED | 1 | 0 | 2 |
PFKP WILD-TYPE | 247 | 217 | 185 |
P value = 0.506 (Fisher's exact test), Q value = 1
Table S1300. Gene #118: 'PFKP MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PFKP MUTATED | 2 | 0 | 1 | 0 | 0 | 0 |
PFKP WILD-TYPE | 113 | 63 | 188 | 117 | 108 | 60 |
P value = 0.419 (Fisher's exact test), Q value = 1
Table S1301. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GYLTL1B MUTATED | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 |
GYLTL1B WILD-TYPE | 20 | 38 | 114 | 96 | 107 | 72 | 19 | 39 |
P value = 0.72 (Fisher's exact test), Q value = 1
Table S1302. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GYLTL1B MUTATED | 0 | 1 | 1 | 1 | 1 |
GYLTL1B WILD-TYPE | 96 | 151 | 115 | 88 | 55 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1303. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GYLTL1B MUTATED | 2 | 1 | 0 | 1 | 0 |
GYLTL1B WILD-TYPE | 365 | 225 | 91 | 240 | 37 |
P value = 0.688 (Fisher's exact test), Q value = 1
Table S1304. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GYLTL1B MUTATED | 1 | 1 | 2 |
GYLTL1B WILD-TYPE | 145 | 128 | 116 |
P value = 0.532 (Fisher's exact test), Q value = 1
Table S1305. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GYLTL1B MUTATED | 0 | 2 | 2 | 0 | 0 |
GYLTL1B WILD-TYPE | 59 | 107 | 88 | 104 | 31 |
P value = 0.687 (Fisher's exact test), Q value = 1
Table S1306. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GYLTL1B MUTATED | 1 | 0 | 2 | 1 | 0 | 0 | 0 |
GYLTL1B WILD-TYPE | 178 | 135 | 213 | 155 | 225 | 48 | 15 |
P value = 0.47 (Fisher's exact test), Q value = 1
Table S1307. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GYLTL1B MUTATED | 1 | 0 | 1 | 2 | 0 | 0 |
GYLTL1B WILD-TYPE | 167 | 222 | 187 | 170 | 171 | 52 |
P value = 0.82 (Fisher's exact test), Q value = 1
Table S1308. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GYLTL1B MUTATED | 1 | 1 | 2 |
GYLTL1B WILD-TYPE | 269 | 412 | 272 |
P value = 0.473 (Fisher's exact test), Q value = 1
Table S1309. Gene #119: 'GYLTL1B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GYLTL1B MUTATED | 0 | 1 | 1 | 1 | 1 |
GYLTL1B WILD-TYPE | 152 | 173 | 389 | 124 | 115 |
P value = 0.865 (Fisher's exact test), Q value = 1
Table S1310. Gene #120: 'ANGPTL6 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ANGPTL6 MUTATED | 2 | 0 | 0 | 1 | 0 |
ANGPTL6 WILD-TYPE | 365 | 226 | 91 | 240 | 37 |
P value = 0.545 (Fisher's exact test), Q value = 1
Table S1311. Gene #120: 'ANGPTL6 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ANGPTL6 MUTATED | 1 | 0 | 2 | 0 | 0 | 0 | 0 |
ANGPTL6 WILD-TYPE | 178 | 135 | 213 | 156 | 225 | 48 | 15 |
P value = 0.907 (Fisher's exact test), Q value = 1
Table S1312. Gene #120: 'ANGPTL6 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ANGPTL6 MUTATED | 1 | 1 | 1 | 0 | 0 | 0 |
ANGPTL6 WILD-TYPE | 167 | 221 | 187 | 172 | 171 | 52 |
P value = 0.88 (Fisher's exact test), Q value = 1
Table S1313. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SP3 MUTATED | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 |
SP3 WILD-TYPE | 21 | 38 | 113 | 97 | 106 | 72 | 19 | 39 |
P value = 0.552 (Fisher's exact test), Q value = 1
Table S1314. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SP3 MUTATED | 0 | 3 | 1 | 0 | 0 |
SP3 WILD-TYPE | 96 | 149 | 115 | 89 | 56 |
P value = 0.553 (Fisher's exact test), Q value = 1
Table S1315. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SP3 MUTATED | 3 | 2 | 1 | 0 | 0 |
SP3 WILD-TYPE | 364 | 224 | 90 | 241 | 37 |
P value = 0.91 (Fisher's exact test), Q value = 1
Table S1316. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SP3 MUTATED | 0 | 2 | 1 | 0 | 1 |
SP3 WILD-TYPE | 116 | 179 | 156 | 83 | 110 |
P value = 0.198 (Fisher's exact test), Q value = 1
Table S1317. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SP3 MUTATED | 0 | 2 | 0 | 2 | 2 | 1 | 0 |
SP3 WILD-TYPE | 179 | 133 | 215 | 154 | 223 | 47 | 15 |
P value = 0.459 (Fisher's exact test), Q value = 1
Table S1318. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SP3 MUTATED | 0 | 3 | 2 | 2 | 0 | 0 |
SP3 WILD-TYPE | 168 | 219 | 186 | 170 | 171 | 52 |
P value = 0.246 (Fisher's exact test), Q value = 1
Table S1319. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SP3 MUTATED | 3 | 4 | 0 |
SP3 WILD-TYPE | 267 | 409 | 274 |
P value = 0.594 (Fisher's exact test), Q value = 1
Table S1320. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SP3 MUTATED | 0 | 1 | 5 | 0 | 1 |
SP3 WILD-TYPE | 152 | 173 | 385 | 125 | 115 |
P value = 0.26 (Fisher's exact test), Q value = 1
Table S1321. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SP3 MUTATED | 1 | 3 | 0 |
SP3 WILD-TYPE | 247 | 214 | 187 |
P value = 0.831 (Fisher's exact test), Q value = 1
Table S1322. Gene #121: 'SP3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SP3 MUTATED | 0 | 1 | 1 | 1 | 1 | 0 |
SP3 WILD-TYPE | 115 | 62 | 188 | 116 | 107 | 60 |
P value = 0.386 (Fisher's exact test), Q value = 1
Table S1323. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
RUFY1 MUTATED | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
RUFY1 WILD-TYPE | 20 | 38 | 113 | 97 | 107 | 73 | 19 | 39 |
P value = 0.731 (Fisher's exact test), Q value = 1
Table S1324. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
RUFY1 MUTATED | 1 | 2 | 0 | 0 | 0 |
RUFY1 WILD-TYPE | 95 | 150 | 116 | 89 | 56 |
P value = 0.343 (Fisher's exact test), Q value = 1
Table S1325. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
RUFY1 MUTATED | 2 | 1 | 1 | 1 | 1 |
RUFY1 WILD-TYPE | 365 | 225 | 90 | 240 | 36 |
P value = 0.162 (Fisher's exact test), Q value = 1
Table S1326. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
RUFY1 MUTATED | 1 | 0 | 3 | 0 | 0 |
RUFY1 WILD-TYPE | 115 | 181 | 154 | 83 | 111 |
P value = 0.847 (Fisher's exact test), Q value = 1
Table S1327. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
RUFY1 MUTATED | 1 | 0 | 1 | 1 | 3 | 0 | 0 |
RUFY1 WILD-TYPE | 178 | 135 | 214 | 155 | 222 | 48 | 15 |
P value = 0.00535 (Fisher's exact test), Q value = 1
Table S1328. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
RUFY1 MUTATED | 1 | 0 | 0 | 5 | 0 | 0 |
RUFY1 WILD-TYPE | 167 | 222 | 188 | 167 | 171 | 52 |
Figure S170. Get High-res Image Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D122V8.png)
P value = 0.667 (Fisher's exact test), Q value = 1
Table S1329. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
RUFY1 MUTATED | 1 | 4 | 1 |
RUFY1 WILD-TYPE | 269 | 409 | 273 |
P value = 0.345 (Fisher's exact test), Q value = 1
Table S1330. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
RUFY1 MUTATED | 0 | 0 | 5 | 1 | 0 |
RUFY1 WILD-TYPE | 152 | 174 | 385 | 124 | 116 |
P value = 0.319 (Fisher's exact test), Q value = 1
Table S1331. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
RUFY1 MUTATED | 3 | 0 | 1 |
RUFY1 WILD-TYPE | 245 | 217 | 186 |
P value = 0.64 (Fisher's exact test), Q value = 1
Table S1332. Gene #122: 'RUFY1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
RUFY1 MUTATED | 1 | 1 | 2 | 0 | 0 | 0 |
RUFY1 WILD-TYPE | 114 | 62 | 187 | 117 | 108 | 60 |
P value = 0.325 (Fisher's exact test), Q value = 1
Table S1333. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
LIFR MUTATED | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 1 |
LIFR WILD-TYPE | 21 | 38 | 114 | 97 | 106 | 71 | 19 | 38 |
P value = 0.481 (Fisher's exact test), Q value = 1
Table S1334. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
LIFR MUTATED | 0 | 3 | 2 | 0 | 0 |
LIFR WILD-TYPE | 96 | 149 | 114 | 89 | 56 |
P value = 0.211 (Fisher's exact test), Q value = 1
Table S1335. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
LIFR MUTATED | 5 | 0 | 1 | 2 | 1 |
LIFR WILD-TYPE | 362 | 226 | 90 | 239 | 36 |
P value = 0.279 (Fisher's exact test), Q value = 1
Table S1336. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
LIFR MUTATED | 1 | 0 | 3 | 1 | 2 |
LIFR WILD-TYPE | 115 | 181 | 154 | 82 | 109 |
P value = 0.00796 (Fisher's exact test), Q value = 1
Table S1337. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
LIFR MUTATED | 0 | 0 | 4 |
LIFR WILD-TYPE | 146 | 129 | 114 |
Figure S171. Get High-res Image Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
![](D123V5.png)
P value = 0.072 (Fisher's exact test), Q value = 1
Table S1338. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
LIFR MUTATED | 0 | 4 | 0 | 0 | 0 |
LIFR WILD-TYPE | 59 | 105 | 90 | 104 | 31 |
P value = 0.476 (Fisher's exact test), Q value = 1
Table S1339. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
LIFR MUTATED | 1 | 2 | 1 | 3 | 1 | 1 | 0 |
LIFR WILD-TYPE | 178 | 133 | 214 | 153 | 224 | 47 | 15 |
P value = 0.08 (Fisher's exact test), Q value = 1
Table S1340. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
LIFR MUTATED | 1 | 3 | 0 | 4 | 0 | 1 |
LIFR WILD-TYPE | 167 | 219 | 188 | 168 | 171 | 51 |
P value = 0.439 (Fisher's exact test), Q value = 1
Table S1341. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
LIFR MUTATED | 4 | 4 | 1 |
LIFR WILD-TYPE | 266 | 409 | 273 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1342. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
LIFR MUTATED | 1 | 2 | 4 | 1 | 1 |
LIFR WILD-TYPE | 151 | 172 | 386 | 124 | 115 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1343. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
LIFR MUTATED | 2 | 2 | 1 |
LIFR WILD-TYPE | 246 | 215 | 186 |
P value = 0.815 (Fisher's exact test), Q value = 1
Table S1344. Gene #123: 'LIFR MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
LIFR MUTATED | 1 | 1 | 2 | 0 | 1 | 0 |
LIFR WILD-TYPE | 114 | 62 | 187 | 117 | 107 | 60 |
P value = 0.291 (Fisher's exact test), Q value = 1
Table S1345. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
OR6C76 MUTATED | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 0 |
OR6C76 WILD-TYPE | 21 | 38 | 114 | 96 | 106 | 73 | 18 | 39 |
P value = 0.342 (Fisher's exact test), Q value = 1
Table S1346. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
OR6C76 MUTATED | 0 | 3 | 0 | 1 | 0 |
OR6C76 WILD-TYPE | 96 | 149 | 116 | 88 | 56 |
P value = 0.422 (Fisher's exact test), Q value = 1
Table S1347. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
OR6C76 MUTATED | 4 | 1 | 1 | 0 | 0 |
OR6C76 WILD-TYPE | 363 | 225 | 90 | 241 | 37 |
P value = 0.735 (Fisher's exact test), Q value = 1
Table S1348. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
OR6C76 MUTATED | 1 | 1 | 1 | 0 | 2 |
OR6C76 WILD-TYPE | 115 | 180 | 156 | 83 | 109 |
P value = 0.519 (Fisher's exact test), Q value = 1
Table S1349. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
OR6C76 MUTATED | 1 | 2 | 0 |
OR6C76 WILD-TYPE | 145 | 127 | 118 |
P value = 0.711 (Fisher's exact test), Q value = 1
Table S1350. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
OR6C76 MUTATED | 1 | 1 | 1 | 0 | 0 |
OR6C76 WILD-TYPE | 58 | 108 | 89 | 104 | 31 |
P value = 0.503 (Fisher's exact test), Q value = 1
Table S1351. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
OR6C76 MUTATED | 1 | 2 | 3 | 1 | 0 | 0 | 0 |
OR6C76 WILD-TYPE | 178 | 133 | 212 | 155 | 225 | 48 | 15 |
P value = 0.873 (Fisher's exact test), Q value = 1
Table S1352. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
OR6C76 MUTATED | 1 | 2 | 1 | 1 | 1 | 1 |
OR6C76 WILD-TYPE | 167 | 220 | 187 | 171 | 170 | 51 |
P value = 0.499 (Fisher's exact test), Q value = 1
Table S1353. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
OR6C76 MUTATED | 3 | 2 | 2 |
OR6C76 WILD-TYPE | 267 | 411 | 272 |
P value = 0.239 (Fisher's exact test), Q value = 1
Table S1354. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
OR6C76 MUTATED | 2 | 1 | 1 | 1 | 2 |
OR6C76 WILD-TYPE | 150 | 173 | 389 | 124 | 114 |
P value = 0.532 (Fisher's exact test), Q value = 1
Table S1355. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
OR6C76 MUTATED | 1 | 3 | 1 |
OR6C76 WILD-TYPE | 247 | 214 | 186 |
P value = 0.489 (Fisher's exact test), Q value = 1
Table S1356. Gene #124: 'OR6C76 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
OR6C76 MUTATED | 1 | 0 | 1 | 0 | 2 | 1 |
OR6C76 WILD-TYPE | 114 | 63 | 188 | 117 | 106 | 59 |
P value = 0.0304 (Fisher's exact test), Q value = 1
Table S1357. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HCFC2 MUTATED | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 |
HCFC2 WILD-TYPE | 20 | 38 | 113 | 97 | 108 | 73 | 18 | 38 |
Figure S172. Get High-res Image Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
![](D125V1.png)
P value = 0.551 (Fisher's exact test), Q value = 1
Table S1358. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HCFC2 MUTATED | 0 | 3 | 1 | 0 | 0 |
HCFC2 WILD-TYPE | 96 | 149 | 115 | 89 | 56 |
P value = 0.158 (Fisher's exact test), Q value = 1
Table S1359. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HCFC2 MUTATED | 4 | 1 | 1 | 2 | 2 |
HCFC2 WILD-TYPE | 363 | 225 | 90 | 239 | 35 |
P value = 0.843 (Fisher's exact test), Q value = 1
Table S1360. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HCFC2 MUTATED | 2 | 2 | 3 | 0 | 1 |
HCFC2 WILD-TYPE | 114 | 179 | 154 | 83 | 110 |
P value = 0.0278 (Fisher's exact test), Q value = 1
Table S1361. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HCFC2 MUTATED | 1 | 3 | 1 | 3 | 0 | 1 | 1 |
HCFC2 WILD-TYPE | 178 | 132 | 214 | 153 | 225 | 47 | 14 |
Figure S173. Get High-res Image Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
![](D125V7.png)
P value = 0.7 (Fisher's exact test), Q value = 1
Table S1362. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HCFC2 MUTATED | 1 | 3 | 1 | 3 | 1 | 1 |
HCFC2 WILD-TYPE | 167 | 219 | 187 | 169 | 170 | 51 |
P value = 0.923 (Fisher's exact test), Q value = 1
Table S1363. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HCFC2 MUTATED | 2 | 5 | 3 |
HCFC2 WILD-TYPE | 268 | 408 | 271 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1364. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HCFC2 MUTATED | 1 | 2 | 5 | 1 | 1 |
HCFC2 WILD-TYPE | 151 | 172 | 385 | 124 | 115 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1365. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HCFC2 MUTATED | 3 | 3 | 2 |
HCFC2 WILD-TYPE | 245 | 214 | 185 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1366. Gene #125: 'HCFC2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HCFC2 MUTATED | 1 | 1 | 3 | 1 | 1 | 1 |
HCFC2 WILD-TYPE | 114 | 62 | 186 | 116 | 107 | 59 |
P value = 0.185 (Fisher's exact test), Q value = 1
Table S1367. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ACOT2 MUTATED | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
ACOT2 WILD-TYPE | 21 | 36 | 114 | 96 | 107 | 73 | 19 | 39 |
P value = 0.343 (Fisher's exact test), Q value = 1
Table S1368. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ACOT2 MUTATED | 0 | 3 | 0 | 1 | 0 |
ACOT2 WILD-TYPE | 96 | 149 | 116 | 88 | 56 |
P value = 0.414 (Fisher's exact test), Q value = 1
Table S1369. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ACOT2 MUTATED | 2 | 2 | 1 | 0 | 0 |
ACOT2 WILD-TYPE | 365 | 224 | 90 | 241 | 37 |
P value = 0.108 (Fisher's exact test), Q value = 1
Table S1370. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ACOT2 MUTATED | 0 | 0 | 1 | 2 | 1 |
ACOT2 WILD-TYPE | 116 | 181 | 156 | 81 | 110 |
P value = 0.736 (Fisher's exact test), Q value = 1
Table S1371. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ACOT2 MUTATED | 1 | 2 | 1 | 0 | 1 | 0 | 0 |
ACOT2 WILD-TYPE | 178 | 133 | 214 | 156 | 224 | 48 | 15 |
P value = 0.933 (Fisher's exact test), Q value = 1
Table S1372. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ACOT2 MUTATED | 1 | 2 | 1 | 0 | 1 | 0 |
ACOT2 WILD-TYPE | 167 | 220 | 187 | 172 | 170 | 52 |
P value = 0.338 (Fisher's exact test), Q value = 1
Table S1373. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ACOT2 MUTATED | 3 | 1 | 1 |
ACOT2 WILD-TYPE | 267 | 412 | 273 |
P value = 0.923 (Fisher's exact test), Q value = 1
Table S1374. Gene #126: 'ACOT2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ACOT2 MUTATED | 1 | 1 | 2 | 0 | 1 |
ACOT2 WILD-TYPE | 151 | 173 | 388 | 125 | 115 |
P value = 0.672 (Fisher's exact test), Q value = 1
Table S1375. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
KIAA0430 MUTATED | 0 | 1 | 3 | 1 | 1 | 1 | 1 | 0 |
KIAA0430 WILD-TYPE | 21 | 37 | 111 | 96 | 107 | 72 | 18 | 39 |
P value = 0.747 (Fisher's exact test), Q value = 1
Table S1376. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
KIAA0430 MUTATED | 3 | 2 | 2 | 1 | 0 |
KIAA0430 WILD-TYPE | 93 | 150 | 114 | 88 | 56 |
P value = 0.143 (Fisher's exact test), Q value = 1
Table S1377. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
KIAA0430 MUTATED | 3 | 5 | 4 | 3 | 0 |
KIAA0430 WILD-TYPE | 364 | 221 | 87 | 238 | 37 |
P value = 0.151 (Fisher's exact test), Q value = 1
Table S1378. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
KIAA0430 MUTATED | 2 | 1 | 2 | 4 | 1 |
KIAA0430 WILD-TYPE | 114 | 180 | 155 | 79 | 110 |
P value = 0.327 (Fisher's exact test), Q value = 1
Table S1379. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
KIAA0430 MUTATED | 3 | 0 | 1 |
KIAA0430 WILD-TYPE | 143 | 129 | 117 |
P value = 0.275 (Fisher's exact test), Q value = 1
Table S1380. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
KIAA0430 MUTATED | 0 | 0 | 1 | 3 | 0 |
KIAA0430 WILD-TYPE | 59 | 109 | 89 | 101 | 31 |
P value = 0.581 (Fisher's exact test), Q value = 1
Table S1381. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
KIAA0430 MUTATED | 4 | 2 | 2 | 2 | 4 | 0 | 1 |
KIAA0430 WILD-TYPE | 175 | 133 | 213 | 154 | 221 | 48 | 14 |
P value = 0.586 (Fisher's exact test), Q value = 1
Table S1382. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
KIAA0430 MUTATED | 3 | 4 | 2 | 5 | 1 | 0 |
KIAA0430 WILD-TYPE | 165 | 218 | 186 | 167 | 170 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1383. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
KIAA0430 MUTATED | 4 | 7 | 4 |
KIAA0430 WILD-TYPE | 266 | 406 | 270 |
P value = 0.808 (Fisher's exact test), Q value = 1
Table S1384. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
KIAA0430 MUTATED | 1 | 4 | 7 | 2 | 1 |
KIAA0430 WILD-TYPE | 151 | 170 | 383 | 123 | 115 |
P value = 0.741 (Fisher's exact test), Q value = 1
Table S1385. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
KIAA0430 MUTATED | 2 | 3 | 3 |
KIAA0430 WILD-TYPE | 246 | 214 | 184 |
P value = 0.231 (Fisher's exact test), Q value = 1
Table S1386. Gene #127: 'KIAA0430 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
KIAA0430 MUTATED | 3 | 1 | 1 | 3 | 0 | 0 |
KIAA0430 WILD-TYPE | 112 | 62 | 188 | 114 | 108 | 60 |
P value = 0.573 (Fisher's exact test), Q value = 1
Table S1387. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GTF2IRD2 MUTATED | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 2 |
GTF2IRD2 WILD-TYPE | 21 | 37 | 113 | 96 | 107 | 72 | 19 | 37 |
P value = 0.96 (Fisher's exact test), Q value = 1
Table S1388. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GTF2IRD2 MUTATED | 1 | 3 | 1 | 1 | 1 |
GTF2IRD2 WILD-TYPE | 95 | 149 | 115 | 88 | 55 |
P value = 0.0191 (Fisher's exact test), Q value = 1
Table S1389. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GTF2IRD2 MUTATED | 1 | 1 | 4 | 2 | 0 |
GTF2IRD2 WILD-TYPE | 366 | 225 | 87 | 239 | 37 |
Figure S174. Get High-res Image Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
![](D128V3.png)
P value = 0.519 (Fisher's exact test), Q value = 1
Table S1390. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
GTF2IRD2 MUTATED | 1 | 1 | 0 | 1 | 0 |
GTF2IRD2 WILD-TYPE | 115 | 180 | 157 | 82 | 111 |
P value = 0.384 (Fisher's exact test), Q value = 1
Table S1391. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GTF2IRD2 MUTATED | 3 | 2 | 0 |
GTF2IRD2 WILD-TYPE | 143 | 127 | 118 |
P value = 0.957 (Fisher's exact test), Q value = 1
Table S1392. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GTF2IRD2 MUTATED | 1 | 1 | 1 | 2 | 0 |
GTF2IRD2 WILD-TYPE | 58 | 108 | 89 | 102 | 31 |
P value = 0.65 (Fisher's exact test), Q value = 1
Table S1393. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GTF2IRD2 MUTATED | 2 | 2 | 1 | 1 | 1 | 1 | 0 |
GTF2IRD2 WILD-TYPE | 177 | 133 | 214 | 155 | 224 | 47 | 15 |
P value = 0.707 (Fisher's exact test), Q value = 1
Table S1394. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GTF2IRD2 MUTATED | 2 | 3 | 1 | 2 | 0 | 0 |
GTF2IRD2 WILD-TYPE | 166 | 219 | 187 | 170 | 171 | 52 |
P value = 0.503 (Fisher's exact test), Q value = 1
Table S1395. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GTF2IRD2 MUTATED | 3 | 2 | 2 |
GTF2IRD2 WILD-TYPE | 267 | 411 | 272 |
P value = 0.559 (Fisher's exact test), Q value = 1
Table S1396. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GTF2IRD2 MUTATED | 1 | 2 | 2 | 2 | 0 |
GTF2IRD2 WILD-TYPE | 151 | 172 | 388 | 123 | 116 |
P value = 0.687 (Fisher's exact test), Q value = 1
Table S1397. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
GTF2IRD2 MUTATED | 1 | 1 | 2 |
GTF2IRD2 WILD-TYPE | 247 | 216 | 185 |
P value = 0.021 (Fisher's exact test), Q value = 1
Table S1398. Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
GTF2IRD2 MUTATED | 2 | 2 | 0 | 0 | 0 | 0 |
GTF2IRD2 WILD-TYPE | 113 | 61 | 189 | 117 | 108 | 60 |
Figure S175. Get High-res Image Gene #128: 'GTF2IRD2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
![](D128V12.png)
P value = 0.673 (Fisher's exact test), Q value = 1
Table S1399. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
NPAS4 MUTATED | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 0 |
NPAS4 WILD-TYPE | 21 | 38 | 110 | 96 | 107 | 73 | 19 | 39 |
P value = 0.146 (Fisher's exact test), Q value = 1
Table S1400. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
NPAS4 MUTATED | 3 | 0 | 1 | 1 | 1 |
NPAS4 WILD-TYPE | 93 | 152 | 115 | 88 | 55 |
P value = 0.166 (Fisher's exact test), Q value = 1
Table S1401. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
NPAS4 MUTATED | 1 | 5 | 0 | 3 | 0 |
NPAS4 WILD-TYPE | 366 | 221 | 91 | 238 | 37 |
P value = 0.537 (Fisher's exact test), Q value = 1
Table S1402. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
NPAS4 MUTATED | 2 | 3 | 1 | 0 | 0 |
NPAS4 WILD-TYPE | 114 | 178 | 156 | 83 | 111 |
P value = 0.835 (Fisher's exact test), Q value = 1
Table S1403. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
NPAS4 MUTATED | 1 | 2 | 1 |
NPAS4 WILD-TYPE | 145 | 127 | 117 |
P value = 0.883 (Fisher's exact test), Q value = 1
Table S1404. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
NPAS4 MUTATED | 0 | 1 | 1 | 2 | 0 |
NPAS4 WILD-TYPE | 59 | 108 | 89 | 102 | 31 |
P value = 0.232 (Fisher's exact test), Q value = 1
Table S1405. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
NPAS4 MUTATED | 3 | 0 | 1 | 0 | 5 | 0 | 0 |
NPAS4 WILD-TYPE | 176 | 135 | 214 | 156 | 220 | 48 | 15 |
P value = 0.0575 (Fisher's exact test), Q value = 1
Table S1406. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
NPAS4 MUTATED | 3 | 0 | 0 | 2 | 4 | 0 |
NPAS4 WILD-TYPE | 165 | 222 | 188 | 170 | 167 | 52 |
P value = 0.147 (Fisher's exact test), Q value = 1
Table S1407. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
NPAS4 MUTATED | 0 | 5 | 4 |
NPAS4 WILD-TYPE | 270 | 408 | 270 |
P value = 0.134 (Fisher's exact test), Q value = 1
Table S1408. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
NPAS4 MUTATED | 0 | 4 | 2 | 2 | 1 |
NPAS4 WILD-TYPE | 152 | 170 | 388 | 123 | 115 |
P value = 0.389 (Fisher's exact test), Q value = 1
Table S1409. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
NPAS4 MUTATED | 1 | 1 | 3 |
NPAS4 WILD-TYPE | 247 | 216 | 184 |
P value = 0.598 (Fisher's exact test), Q value = 1
Table S1410. Gene #129: 'NPAS4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
NPAS4 MUTATED | 2 | 0 | 1 | 2 | 0 | 0 |
NPAS4 WILD-TYPE | 113 | 63 | 188 | 115 | 108 | 60 |
P value = 0.498 (Fisher's exact test), Q value = 1
Table S1411. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
JAK1 MUTATED | 0 | 1 | 2 | 0 | 3 | 0 | 0 | 1 |
JAK1 WILD-TYPE | 21 | 37 | 112 | 97 | 105 | 73 | 19 | 38 |
P value = 0.476 (Fisher's exact test), Q value = 1
Table S1412. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
JAK1 MUTATED | 2 | 4 | 1 | 0 | 0 |
JAK1 WILD-TYPE | 94 | 148 | 115 | 89 | 56 |
P value = 0.286 (Fisher's exact test), Q value = 1
Table S1413. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
JAK1 MUTATED | 4 | 1 | 3 | 2 | 0 |
JAK1 WILD-TYPE | 363 | 225 | 88 | 239 | 37 |
P value = 0.462 (Fisher's exact test), Q value = 1
Table S1414. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
JAK1 MUTATED | 0 | 2 | 3 | 1 | 0 |
JAK1 WILD-TYPE | 116 | 179 | 154 | 82 | 111 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1415. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
JAK1 MUTATED | 2 | 2 | 1 |
JAK1 WILD-TYPE | 144 | 127 | 117 |
P value = 0.731 (Fisher's exact test), Q value = 1
Table S1416. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
JAK1 MUTATED | 1 | 2 | 0 | 2 | 0 |
JAK1 WILD-TYPE | 58 | 107 | 90 | 102 | 31 |
P value = 0.271 (Fisher's exact test), Q value = 1
Table S1417. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
JAK1 MUTATED | 0 | 4 | 2 | 1 | 4 | 0 | 0 |
JAK1 WILD-TYPE | 179 | 131 | 213 | 155 | 221 | 48 | 15 |
P value = 0.318 (Fisher's exact test), Q value = 1
Table S1418. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
JAK1 MUTATED | 0 | 4 | 1 | 4 | 2 | 0 |
JAK1 WILD-TYPE | 168 | 218 | 187 | 168 | 169 | 52 |
P value = 0.0517 (Fisher's exact test), Q value = 1
Table S1419. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
JAK1 MUTATED | 3 | 8 | 0 |
JAK1 WILD-TYPE | 267 | 405 | 274 |
P value = 0.5 (Fisher's exact test), Q value = 1
Table S1420. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
JAK1 MUTATED | 2 | 3 | 6 | 0 | 0 |
JAK1 WILD-TYPE | 150 | 171 | 384 | 125 | 116 |
P value = 0.231 (Fisher's exact test), Q value = 1
Table S1421. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
JAK1 MUTATED | 4 | 1 | 0 |
JAK1 WILD-TYPE | 244 | 216 | 187 |
P value = 0.579 (Fisher's exact test), Q value = 1
Table S1422. Gene #130: 'JAK1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
JAK1 MUTATED | 0 | 1 | 3 | 1 | 0 | 0 |
JAK1 WILD-TYPE | 115 | 62 | 186 | 116 | 108 | 60 |
P value = 0.0743 (Fisher's exact test), Q value = 1
Table S1423. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FGFR3 MUTATED | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
FGFR3 WILD-TYPE | 20 | 38 | 114 | 96 | 108 | 73 | 19 | 38 |
P value = 0.922 (Fisher's exact test), Q value = 1
Table S1424. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FGFR3 MUTATED | 0 | 1 | 1 | 1 | 0 |
FGFR3 WILD-TYPE | 96 | 151 | 115 | 88 | 56 |
P value = 0.897 (Fisher's exact test), Q value = 1
Table S1425. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FGFR3 MUTATED | 1 | 1 | 0 | 2 | 0 |
FGFR3 WILD-TYPE | 366 | 225 | 91 | 239 | 37 |
P value = 0.435 (Fisher's exact test), Q value = 1
Table S1426. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FGFR3 MUTATED | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
FGFR3 WILD-TYPE | 177 | 135 | 213 | 156 | 225 | 48 | 15 |
P value = 0.638 (Fisher's exact test), Q value = 1
Table S1427. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FGFR3 MUTATED | 2 | 1 | 1 | 0 | 0 | 0 |
FGFR3 WILD-TYPE | 166 | 221 | 187 | 172 | 171 | 52 |
P value = 0.217 (Fisher's exact test), Q value = 1
Table S1428. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FGFR3 MUTATED | 0 | 1 | 3 |
FGFR3 WILD-TYPE | 270 | 412 | 271 |
P value = 0.246 (Fisher's exact test), Q value = 1
Table S1429. Gene #131: 'FGFR3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FGFR3 MUTATED | 0 | 1 | 1 | 2 | 0 |
FGFR3 WILD-TYPE | 152 | 173 | 389 | 123 | 116 |
P value = 0.812 (Fisher's exact test), Q value = 1
Table S1430. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
FBXW7 MUTATED | 0 | 1 | 1 | 2 | 2 | 0 | 0 | 0 |
FBXW7 WILD-TYPE | 21 | 37 | 113 | 95 | 106 | 73 | 19 | 39 |
P value = 0.535 (Fisher's exact test), Q value = 1
Table S1431. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
FBXW7 MUTATED | 1 | 2 | 0 | 2 | 1 |
FBXW7 WILD-TYPE | 95 | 150 | 116 | 87 | 55 |
P value = 0.168 (Fisher's exact test), Q value = 1
Table S1432. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
FBXW7 MUTATED | 5 | 1 | 1 | 8 | 0 |
FBXW7 WILD-TYPE | 362 | 225 | 90 | 233 | 37 |
P value = 0.00416 (Fisher's exact test), Q value = 1
Table S1433. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
FBXW7 MUTATED | 7 | 2 | 0 | 1 | 1 |
FBXW7 WILD-TYPE | 109 | 179 | 157 | 82 | 110 |
Figure S176. Get High-res Image Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
![](D132V4.png)
P value = 0.779 (Fisher's exact test), Q value = 1
Table S1434. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
FBXW7 MUTATED | 2 | 1 | 0 |
FBXW7 WILD-TYPE | 144 | 128 | 118 |
P value = 0.548 (Fisher's exact test), Q value = 1
Table S1435. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
FBXW7 MUTATED | 0 | 0 | 1 | 2 | 0 |
FBXW7 WILD-TYPE | 59 | 109 | 89 | 102 | 31 |
P value = 0.129 (Fisher's exact test), Q value = 1
Table S1436. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
FBXW7 MUTATED | 7 | 1 | 5 | 1 | 1 | 0 | 0 |
FBXW7 WILD-TYPE | 172 | 134 | 210 | 155 | 224 | 48 | 15 |
P value = 0.0699 (Fisher's exact test), Q value = 1
Table S1437. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
FBXW7 MUTATED | 7 | 1 | 4 | 2 | 1 | 0 |
FBXW7 WILD-TYPE | 161 | 221 | 184 | 170 | 170 | 52 |
P value = 0.304 (Fisher's exact test), Q value = 1
Table S1438. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
FBXW7 MUTATED | 3 | 5 | 7 |
FBXW7 WILD-TYPE | 267 | 408 | 267 |
P value = 0.09 (Fisher's exact test), Q value = 1
Table S1439. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
FBXW7 MUTATED | 2 | 2 | 4 | 6 | 1 |
FBXW7 WILD-TYPE | 150 | 172 | 386 | 119 | 115 |
P value = 0.342 (Fisher's exact test), Q value = 1
Table S1440. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
FBXW7 MUTATED | 3 | 2 | 5 |
FBXW7 WILD-TYPE | 245 | 215 | 182 |
P value = 0.121 (Fisher's exact test), Q value = 1
Table S1441. Gene #132: 'FBXW7 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
FBXW7 MUTATED | 5 | 1 | 2 | 0 | 2 | 0 |
FBXW7 WILD-TYPE | 110 | 62 | 187 | 117 | 106 | 60 |
P value = 0.782 (Fisher's exact test), Q value = 1
Table S1442. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
OR2T8 MUTATED | 2 | 1 | 1 | 2 | 0 |
OR2T8 WILD-TYPE | 365 | 225 | 90 | 239 | 37 |
P value = 0.691 (Fisher's exact test), Q value = 1
Table S1443. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
OR2T8 MUTATED | 2 | 2 | 2 | 0 | 0 |
OR2T8 WILD-TYPE | 114 | 179 | 155 | 83 | 111 |
P value = 0.766 (Fisher's exact test), Q value = 1
Table S1444. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
OR2T8 MUTATED | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
OR2T8 WILD-TYPE | 178 | 134 | 214 | 155 | 224 | 47 | 15 |
P value = 0.619 (Fisher's exact test), Q value = 1
Table S1445. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
OR2T8 MUTATED | 1 | 2 | 1 | 0 | 1 | 1 |
OR2T8 WILD-TYPE | 167 | 220 | 187 | 172 | 170 | 51 |
P value = 0.03 (Fisher's exact test), Q value = 1
Table S1446. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
OR2T8 MUTATED | 4 | 0 | 2 |
OR2T8 WILD-TYPE | 266 | 413 | 272 |
Figure S177. Get High-res Image Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D133V9.png)
P value = 0.157 (Fisher's exact test), Q value = 1
Table S1447. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
OR2T8 MUTATED | 0 | 3 | 1 | 1 | 1 |
OR2T8 WILD-TYPE | 152 | 171 | 389 | 124 | 115 |
P value = 0.164 (Fisher's exact test), Q value = 1
Table S1448. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
OR2T8 MUTATED | 0 | 3 | 2 |
OR2T8 WILD-TYPE | 248 | 214 | 185 |
P value = 0.631 (Fisher's exact test), Q value = 1
Table S1449. Gene #133: 'OR2T8 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
OR2T8 MUTATED | 1 | 0 | 1 | 2 | 0 | 1 |
OR2T8 WILD-TYPE | 114 | 63 | 188 | 115 | 108 | 59 |
P value = 0.105 (Fisher's exact test), Q value = 1
Table S1450. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SHANK2 MUTATED | 0 | 0 | 0 | 2 | 3 | 5 | 0 | 0 |
SHANK2 WILD-TYPE | 21 | 38 | 114 | 95 | 105 | 68 | 19 | 39 |
P value = 0.196 (Fisher's exact test), Q value = 1
Table S1451. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SHANK2 MUTATED | 0 | 3 | 5 | 2 | 0 |
SHANK2 WILD-TYPE | 96 | 149 | 111 | 87 | 56 |
P value = 0.833 (Fisher's exact test), Q value = 1
Table S1452. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SHANK2 MUTATED | 5 | 5 | 2 | 3 | 0 |
SHANK2 WILD-TYPE | 362 | 221 | 89 | 238 | 37 |
P value = 0.129 (Fisher's exact test), Q value = 1
Table S1453. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SHANK2 MUTATED | 1 | 0 | 4 | 2 | 1 |
SHANK2 WILD-TYPE | 115 | 181 | 153 | 81 | 110 |
P value = 0.0686 (Fisher's exact test), Q value = 1
Table S1454. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SHANK2 MUTATED | 5 | 1 | 0 |
SHANK2 WILD-TYPE | 141 | 128 | 118 |
P value = 0.124 (Fisher's exact test), Q value = 1
Table S1455. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SHANK2 MUTATED | 1 | 0 | 4 | 1 | 0 |
SHANK2 WILD-TYPE | 58 | 109 | 86 | 103 | 31 |
P value = 0.234 (Fisher's exact test), Q value = 1
Table S1456. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SHANK2 MUTATED | 2 | 0 | 3 | 5 | 3 | 2 | 0 |
SHANK2 WILD-TYPE | 177 | 135 | 212 | 151 | 222 | 46 | 15 |
P value = 0.227 (Fisher's exact test), Q value = 1
Table S1457. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SHANK2 MUTATED | 2 | 2 | 2 | 7 | 2 | 0 |
SHANK2 WILD-TYPE | 166 | 220 | 186 | 165 | 169 | 52 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S1458. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SHANK2 MUTATED | 6 | 5 | 4 |
SHANK2 WILD-TYPE | 264 | 408 | 270 |
P value = 0.634 (Fisher's exact test), Q value = 1
Table S1459. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SHANK2 MUTATED | 3 | 2 | 8 | 2 | 0 |
SHANK2 WILD-TYPE | 149 | 172 | 382 | 123 | 116 |
P value = 0.4 (Fisher's exact test), Q value = 1
Table S1460. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SHANK2 MUTATED | 2 | 5 | 2 |
SHANK2 WILD-TYPE | 246 | 212 | 185 |
P value = 0.711 (Fisher's exact test), Q value = 1
Table S1461. Gene #134: 'SHANK2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SHANK2 MUTATED | 2 | 0 | 2 | 2 | 3 | 0 |
SHANK2 WILD-TYPE | 113 | 63 | 187 | 115 | 105 | 60 |
P value = 0.954 (Fisher's exact test), Q value = 1
Table S1462. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
TRMT2A MUTATED | 0 | 0 | 3 | 1 | 1 | 1 | 0 | 0 |
TRMT2A WILD-TYPE | 21 | 38 | 111 | 96 | 107 | 72 | 19 | 39 |
P value = 0.922 (Fisher's exact test), Q value = 1
Table S1463. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
TRMT2A MUTATED | 2 | 2 | 1 | 1 | 0 |
TRMT2A WILD-TYPE | 94 | 150 | 115 | 88 | 56 |
P value = 0.722 (Fisher's exact test), Q value = 1
Table S1464. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TRMT2A MUTATED | 2 | 3 | 0 | 2 | 0 |
TRMT2A WILD-TYPE | 365 | 223 | 91 | 239 | 37 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S1465. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TRMT2A MUTATED | 1 | 0 | 1 | 1 | 1 |
TRMT2A WILD-TYPE | 115 | 181 | 156 | 82 | 110 |
P value = 0.393 (Fisher's exact test), Q value = 1
Table S1466. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
TRMT2A MUTATED | 3 | 1 | 0 |
TRMT2A WILD-TYPE | 143 | 128 | 118 |
P value = 0.616 (Fisher's exact test), Q value = 1
Table S1467. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
TRMT2A MUTATED | 1 | 0 | 1 | 2 | 0 |
TRMT2A WILD-TYPE | 58 | 109 | 89 | 102 | 31 |
P value = 0.779 (Fisher's exact test), Q value = 1
Table S1468. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TRMT2A MUTATED | 1 | 0 | 1 | 2 | 3 | 0 | 0 |
TRMT2A WILD-TYPE | 178 | 135 | 214 | 154 | 222 | 48 | 15 |
P value = 0.444 (Fisher's exact test), Q value = 1
Table S1469. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TRMT2A MUTATED | 1 | 1 | 0 | 3 | 2 | 0 |
TRMT2A WILD-TYPE | 167 | 221 | 188 | 169 | 169 | 52 |
P value = 0.889 (Fisher's exact test), Q value = 1
Table S1470. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TRMT2A MUTATED | 1 | 4 | 2 |
TRMT2A WILD-TYPE | 269 | 409 | 272 |
P value = 0.782 (Fisher's exact test), Q value = 1
Table S1471. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TRMT2A MUTATED | 1 | 0 | 4 | 1 | 1 |
TRMT2A WILD-TYPE | 151 | 174 | 386 | 124 | 115 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S1472. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TRMT2A MUTATED | 2 | 0 | 2 |
TRMT2A WILD-TYPE | 246 | 217 | 185 |
P value = 0.642 (Fisher's exact test), Q value = 1
Table S1473. Gene #135: 'TRMT2A MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TRMT2A MUTATED | 1 | 1 | 2 | 0 | 0 | 0 |
TRMT2A WILD-TYPE | 114 | 62 | 187 | 117 | 108 | 60 |
P value = 0.0874 (Fisher's exact test), Q value = 1
Table S1474. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SHISA4 MUTATED | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
SHISA4 WILD-TYPE | 21 | 36 | 113 | 97 | 108 | 73 | 19 | 39 |
P value = 0.732 (Fisher's exact test), Q value = 1
Table S1475. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SHISA4 MUTATED | 1 | 2 | 0 | 0 | 0 |
SHISA4 WILD-TYPE | 95 | 150 | 116 | 89 | 56 |
P value = 0.0503 (Fisher's exact test), Q value = 1
Table S1476. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SHISA4 MUTATED | 0 | 1 | 1 | 2 | 1 |
SHISA4 WILD-TYPE | 367 | 225 | 90 | 239 | 36 |
P value = 0.115 (Fisher's exact test), Q value = 1
Table S1477. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SHISA4 MUTATED | 2 | 0 | 0 | 1 | 1 |
SHISA4 WILD-TYPE | 114 | 181 | 157 | 82 | 110 |
P value = 0.129 (Fisher's exact test), Q value = 1
Table S1478. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SHISA4 MUTATED | 1 | 1 | 0 | 1 | 1 | 0 | 1 |
SHISA4 WILD-TYPE | 178 | 134 | 215 | 155 | 224 | 48 | 14 |
P value = 0.358 (Fisher's exact test), Q value = 1
Table S1479. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SHISA4 MUTATED | 0 | 2 | 0 | 1 | 1 | 1 |
SHISA4 WILD-TYPE | 168 | 220 | 188 | 171 | 170 | 51 |
P value = 0.461 (Fisher's exact test), Q value = 1
Table S1480. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SHISA4 MUTATED | 2 | 3 | 0 |
SHISA4 WILD-TYPE | 268 | 410 | 274 |
P value = 0.857 (Fisher's exact test), Q value = 1
Table S1481. Gene #136: 'SHISA4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SHISA4 MUTATED | 0 | 1 | 3 | 0 | 1 |
SHISA4 WILD-TYPE | 152 | 173 | 387 | 125 | 115 |
P value = 0.863 (Fisher's exact test), Q value = 1
Table S1482. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CCNL2 MUTATED | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 |
CCNL2 WILD-TYPE | 21 | 38 | 113 | 96 | 107 | 73 | 19 | 38 |
P value = 0.856 (Fisher's exact test), Q value = 1
Table S1483. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CCNL2 MUTATED | 1 | 2 | 0 | 1 | 0 |
CCNL2 WILD-TYPE | 95 | 150 | 116 | 88 | 56 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1484. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CCNL2 MUTATED | 3 | 2 | 0 | 2 | 0 |
CCNL2 WILD-TYPE | 364 | 224 | 91 | 239 | 37 |
P value = 0.348 (Fisher's exact test), Q value = 1
Table S1485. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CCNL2 MUTATED | 0 | 0 | 2 | 1 | 1 |
CCNL2 WILD-TYPE | 116 | 181 | 155 | 82 | 110 |
P value = 0.15 (Fisher's exact test), Q value = 1
Table S1486. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CCNL2 MUTATED | 1 | 0 | 2 | 1 | 1 | 1 | 1 |
CCNL2 WILD-TYPE | 178 | 135 | 213 | 155 | 224 | 47 | 14 |
P value = 0.725 (Fisher's exact test), Q value = 1
Table S1487. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CCNL2 MUTATED | 1 | 3 | 1 | 2 | 0 | 0 |
CCNL2 WILD-TYPE | 167 | 219 | 187 | 170 | 171 | 52 |
P value = 0.426 (Fisher's exact test), Q value = 1
Table S1488. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CCNL2 MUTATED | 1 | 5 | 1 |
CCNL2 WILD-TYPE | 269 | 408 | 273 |
P value = 0.63 (Fisher's exact test), Q value = 1
Table S1489. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CCNL2 MUTATED | 0 | 1 | 5 | 1 | 0 |
CCNL2 WILD-TYPE | 152 | 173 | 385 | 124 | 116 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1490. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CCNL2 MUTATED | 2 | 1 | 1 |
CCNL2 WILD-TYPE | 246 | 216 | 186 |
P value = 0.901 (Fisher's exact test), Q value = 1
Table S1491. Gene #137: 'CCNL2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CCNL2 MUTATED | 1 | 0 | 2 | 0 | 1 | 0 |
CCNL2 WILD-TYPE | 114 | 63 | 187 | 117 | 107 | 60 |
P value = 0.214 (Fisher's exact test), Q value = 1
Table S1492. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SEC14L5 MUTATED | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 |
SEC14L5 WILD-TYPE | 21 | 38 | 113 | 93 | 108 | 73 | 19 | 39 |
P value = 0.00238 (Fisher's exact test), Q value = 1
Table S1493. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SEC14L5 MUTATED | 0 | 0 | 0 | 4 | 1 |
SEC14L5 WILD-TYPE | 96 | 152 | 116 | 85 | 55 |
Figure S178. Get High-res Image Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
![](D138V2.png)
P value = 0.125 (Fisher's exact test), Q value = 1
Table S1494. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SEC14L5 MUTATED | 2 | 0 | 0 | 5 | 0 |
SEC14L5 WILD-TYPE | 365 | 226 | 91 | 236 | 37 |
P value = 0.648 (Fisher's exact test), Q value = 1
Table S1495. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
SEC14L5 MUTATED | 1 | 0 | 1 | 0 | 1 |
SEC14L5 WILD-TYPE | 115 | 181 | 156 | 83 | 110 |
P value = 0.392 (Fisher's exact test), Q value = 1
Table S1496. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SEC14L5 MUTATED | 3 | 1 | 0 |
SEC14L5 WILD-TYPE | 143 | 128 | 118 |
P value = 0.103 (Fisher's exact test), Q value = 1
Table S1497. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SEC14L5 MUTATED | 1 | 0 | 3 | 0 | 0 |
SEC14L5 WILD-TYPE | 58 | 109 | 87 | 104 | 31 |
P value = 0.405 (Fisher's exact test), Q value = 1
Table S1498. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SEC14L5 MUTATED | 4 | 0 | 1 | 1 | 1 | 0 | 0 |
SEC14L5 WILD-TYPE | 175 | 135 | 214 | 155 | 224 | 48 | 15 |
P value = 0.0361 (Fisher's exact test), Q value = 1
Table S1499. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SEC14L5 MUTATED | 4 | 0 | 1 | 1 | 0 | 1 |
SEC14L5 WILD-TYPE | 164 | 222 | 187 | 171 | 171 | 51 |
Figure S179. Get High-res Image Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D138V8.png)
P value = 0.0582 (Fisher's exact test), Q value = 1
Table S1500. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SEC14L5 MUTATED | 1 | 1 | 5 |
SEC14L5 WILD-TYPE | 269 | 412 | 269 |
P value = 0.0427 (Fisher's exact test), Q value = 1
Table S1501. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SEC14L5 MUTATED | 1 | 0 | 1 | 3 | 2 |
SEC14L5 WILD-TYPE | 151 | 174 | 389 | 122 | 114 |
Figure S180. Get High-res Image Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D138V10.png)
P value = 0.0235 (Fisher's exact test), Q value = 1
Table S1502. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SEC14L5 MUTATED | 0 | 0 | 3 |
SEC14L5 WILD-TYPE | 248 | 217 | 184 |
Figure S181. Get High-res Image Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
![](D138V11.png)
P value = 0.59 (Fisher's exact test), Q value = 1
Table S1503. Gene #138: 'SEC14L5 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SEC14L5 MUTATED | 1 | 0 | 1 | 0 | 0 | 1 |
SEC14L5 WILD-TYPE | 114 | 63 | 188 | 117 | 108 | 59 |
P value = 0.559 (Fisher's exact test), Q value = 1
Table S1504. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
SARM1 MUTATED | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 |
SARM1 WILD-TYPE | 21 | 38 | 114 | 94 | 107 | 72 | 19 | 39 |
P value = 0.116 (Fisher's exact test), Q value = 1
Table S1505. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
SARM1 MUTATED | 1 | 0 | 1 | 3 | 0 |
SARM1 WILD-TYPE | 95 | 152 | 115 | 86 | 56 |
P value = 0.681 (Fisher's exact test), Q value = 1
Table S1506. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
SARM1 MUTATED | 2 | 3 | 0 | 1 | 0 |
SARM1 WILD-TYPE | 365 | 223 | 91 | 240 | 37 |
P value = 0.644 (Fisher's exact test), Q value = 1
Table S1507. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
SARM1 MUTATED | 2 | 0 | 1 |
SARM1 WILD-TYPE | 144 | 129 | 117 |
P value = 0.0365 (Fisher's exact test), Q value = 1
Table S1508. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
SARM1 MUTATED | 0 | 0 | 3 | 0 | 0 |
SARM1 WILD-TYPE | 59 | 109 | 87 | 104 | 31 |
Figure S182. Get High-res Image Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D139V6.png)
P value = 0.286 (Fisher's exact test), Q value = 1
Table S1509. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
SARM1 MUTATED | 3 | 0 | 1 | 2 | 0 | 0 | 0 |
SARM1 WILD-TYPE | 176 | 135 | 214 | 154 | 225 | 48 | 15 |
P value = 0.0322 (Fisher's exact test), Q value = 1
Table S1510. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
SARM1 MUTATED | 3 | 0 | 0 | 3 | 0 | 0 |
SARM1 WILD-TYPE | 165 | 222 | 188 | 169 | 171 | 52 |
Figure S183. Get High-res Image Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D139V8.png)
P value = 0.0848 (Fisher's exact test), Q value = 1
Table S1511. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
SARM1 MUTATED | 0 | 2 | 4 |
SARM1 WILD-TYPE | 270 | 411 | 270 |
P value = 0.328 (Fisher's exact test), Q value = 1
Table S1512. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
SARM1 MUTATED | 0 | 0 | 3 | 2 | 1 |
SARM1 WILD-TYPE | 152 | 174 | 387 | 123 | 115 |
P value = 0.105 (Fisher's exact test), Q value = 1
Table S1513. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
SARM1 MUTATED | 1 | 0 | 3 |
SARM1 WILD-TYPE | 247 | 217 | 184 |
P value = 0.217 (Fisher's exact test), Q value = 1
Table S1514. Gene #139: 'SARM1 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
SARM1 MUTATED | 3 | 0 | 1 | 0 | 0 | 0 |
SARM1 WILD-TYPE | 112 | 63 | 188 | 117 | 108 | 60 |
P value = 0.567 (Fisher's exact test), Q value = 1
Table S1515. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
CLEC18B MUTATED | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 |
CLEC18B WILD-TYPE | 21 | 37 | 113 | 96 | 108 | 73 | 19 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1516. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
CLEC18B MUTATED | 1 | 1 | 1 | 0 | 0 |
CLEC18B WILD-TYPE | 95 | 151 | 115 | 89 | 56 |
P value = 0.65 (Fisher's exact test), Q value = 1
Table S1517. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
CLEC18B MUTATED | 1 | 2 | 1 | 2 | 0 |
CLEC18B WILD-TYPE | 366 | 224 | 90 | 239 | 37 |
P value = 0.679 (Fisher's exact test), Q value = 1
Table S1518. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
CLEC18B MUTATED | 2 | 2 | 1 | 0 | 0 |
CLEC18B WILD-TYPE | 114 | 179 | 156 | 83 | 111 |
P value = 0.4 (Fisher's exact test), Q value = 1
Table S1519. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
CLEC18B MUTATED | 1 | 0 | 2 |
CLEC18B WILD-TYPE | 145 | 129 | 116 |
P value = 0.546 (Fisher's exact test), Q value = 1
Table S1520. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
CLEC18B MUTATED | 0 | 0 | 1 | 2 | 0 |
CLEC18B WILD-TYPE | 59 | 109 | 89 | 102 | 31 |
P value = 0.659 (Fisher's exact test), Q value = 1
Table S1521. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
CLEC18B MUTATED | 2 | 2 | 1 | 0 | 1 | 0 | 0 |
CLEC18B WILD-TYPE | 177 | 133 | 214 | 156 | 224 | 48 | 15 |
P value = 0.887 (Fisher's exact test), Q value = 1
Table S1522. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
CLEC18B MUTATED | 0 | 2 | 1 | 2 | 1 | 0 |
CLEC18B WILD-TYPE | 168 | 220 | 187 | 170 | 170 | 52 |
P value = 0.776 (Fisher's exact test), Q value = 1
Table S1523. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
CLEC18B MUTATED | 2 | 2 | 2 |
CLEC18B WILD-TYPE | 268 | 411 | 272 |
P value = 0.783 (Fisher's exact test), Q value = 1
Table S1524. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
CLEC18B MUTATED | 1 | 2 | 2 | 0 | 1 |
CLEC18B WILD-TYPE | 151 | 172 | 388 | 125 | 115 |
P value = 0.51 (Fisher's exact test), Q value = 1
Table S1525. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
CLEC18B MUTATED | 2 | 0 | 1 |
CLEC18B WILD-TYPE | 246 | 217 | 186 |
P value = 0.617 (Fisher's exact test), Q value = 1
Table S1526. Gene #140: 'CLEC18B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
CLEC18B MUTATED | 0 | 0 | 1 | 1 | 0 | 1 |
CLEC18B WILD-TYPE | 115 | 63 | 188 | 116 | 108 | 59 |
P value = 0.832 (Fisher's exact test), Q value = 1
Table S1527. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
GIPC3 MUTATED | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 |
GIPC3 WILD-TYPE | 21 | 38 | 112 | 97 | 107 | 73 | 19 | 39 |
P value = 0.497 (Fisher's exact test), Q value = 1
Table S1528. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
GIPC3 MUTATED | 1 | 1 | 0 | 0 | 1 |
GIPC3 WILD-TYPE | 95 | 151 | 116 | 89 | 55 |
P value = 0.461 (Fisher's exact test), Q value = 1
Table S1529. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GIPC3 MUTATED | 1 | 0 | 1 | 1 | 0 |
GIPC3 WILD-TYPE | 366 | 226 | 90 | 240 | 37 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1530. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
GIPC3 MUTATED | 1 | 1 | 1 |
GIPC3 WILD-TYPE | 145 | 128 | 117 |
P value = 0.17 (Fisher's exact test), Q value = 1
Table S1531. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
GIPC3 MUTATED | 2 | 1 | 0 | 0 | 0 |
GIPC3 WILD-TYPE | 57 | 108 | 90 | 104 | 31 |
P value = 0.636 (Fisher's exact test), Q value = 1
Table S1532. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GIPC3 MUTATED | 0 | 0 | 2 | 0 | 2 | 0 | 0 |
GIPC3 WILD-TYPE | 179 | 135 | 213 | 156 | 223 | 48 | 15 |
P value = 0.709 (Fisher's exact test), Q value = 1
Table S1533. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GIPC3 MUTATED | 0 | 1 | 2 | 0 | 1 | 0 |
GIPC3 WILD-TYPE | 168 | 221 | 186 | 172 | 170 | 52 |
P value = 0.579 (Fisher's exact test), Q value = 1
Table S1534. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GIPC3 MUTATED | 0 | 3 | 1 |
GIPC3 WILD-TYPE | 270 | 410 | 273 |
P value = 0.846 (Fisher's exact test), Q value = 1
Table S1535. Gene #141: 'GIPC3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GIPC3 MUTATED | 0 | 1 | 2 | 0 | 1 |
GIPC3 WILD-TYPE | 152 | 173 | 388 | 125 | 115 |
P value = 0.12 (Fisher's exact test), Q value = 1
Table S1536. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
HPS3 MUTATED | 0 | 0 | 0 | 2 | 0 | 2 | 1 | 0 |
HPS3 WILD-TYPE | 21 | 38 | 114 | 95 | 108 | 71 | 18 | 39 |
P value = 0.511 (Fisher's exact test), Q value = 1
Table S1537. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
HPS3 MUTATED | 0 | 1 | 2 | 2 | 0 |
HPS3 WILD-TYPE | 96 | 151 | 114 | 87 | 56 |
P value = 0.199 (Fisher's exact test), Q value = 1
Table S1538. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
HPS3 MUTATED | 4 | 0 | 0 | 5 | 0 |
HPS3 WILD-TYPE | 363 | 226 | 91 | 236 | 37 |
P value = 0.207 (Fisher's exact test), Q value = 1
Table S1539. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
HPS3 MUTATED | 2 | 0 | 1 | 0 | 2 |
HPS3 WILD-TYPE | 114 | 181 | 156 | 83 | 109 |
P value = 0.112 (Fisher's exact test), Q value = 1
Table S1540. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
HPS3 MUTATED | 3 | 0 | 0 |
HPS3 WILD-TYPE | 143 | 129 | 118 |
P value = 0.0497 (Fisher's exact test), Q value = 1
Table S1541. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
HPS3 MUTATED | 0 | 0 | 2 | 0 | 1 |
HPS3 WILD-TYPE | 59 | 109 | 88 | 104 | 30 |
Figure S184. Get High-res Image Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
![](D142V6.png)
P value = 0.135 (Fisher's exact test), Q value = 1
Table S1542. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
HPS3 MUTATED | 5 | 1 | 1 | 2 | 0 | 0 | 0 |
HPS3 WILD-TYPE | 174 | 134 | 214 | 154 | 225 | 48 | 15 |
P value = 0.005 (Fisher's exact test), Q value = 1
Table S1543. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
HPS3 MUTATED | 5 | 1 | 1 | 0 | 0 | 2 |
HPS3 WILD-TYPE | 163 | 221 | 187 | 172 | 171 | 50 |
Figure S185. Get High-res Image Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
![](D142V8.png)
P value = 0.0467 (Fisher's exact test), Q value = 1
Table S1544. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
HPS3 MUTATED | 1 | 2 | 6 |
HPS3 WILD-TYPE | 269 | 411 | 268 |
Figure S186. Get High-res Image Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D142V9.png)
P value = 0.0425 (Fisher's exact test), Q value = 1
Table S1545. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
HPS3 MUTATED | 1 | 0 | 2 | 3 | 3 |
HPS3 WILD-TYPE | 151 | 174 | 388 | 122 | 113 |
Figure S187. Get High-res Image Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
![](D142V10.png)
P value = 0.143 (Fisher's exact test), Q value = 1
Table S1546. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
HPS3 MUTATED | 1 | 1 | 4 |
HPS3 WILD-TYPE | 247 | 216 | 183 |
P value = 0.0598 (Fisher's exact test), Q value = 1
Table S1547. Gene #142: 'HPS3 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
HPS3 MUTATED | 4 | 1 | 1 | 0 | 0 | 0 |
HPS3 WILD-TYPE | 111 | 62 | 188 | 117 | 108 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1548. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
OR2T35 MUTATED | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 |
OR2T35 WILD-TYPE | 21 | 38 | 113 | 96 | 107 | 73 | 19 | 39 |
P value = 0.0943 (Fisher's exact test), Q value = 1
Table S1549. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
OR2T35 MUTATED | 0 | 0 | 2 | 0 | 1 |
OR2T35 WILD-TYPE | 96 | 152 | 114 | 89 | 55 |
P value = 0.828 (Fisher's exact test), Q value = 1
Table S1550. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
OR2T35 MUTATED | 1 | 2 | 0 | 1 | 0 |
OR2T35 WILD-TYPE | 366 | 224 | 91 | 240 | 37 |
P value = 0.904 (Fisher's exact test), Q value = 1
Table S1551. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
OR2T35 MUTATED | 1 | 0 | 1 | 0 | 2 | 0 | 0 |
OR2T35 WILD-TYPE | 178 | 135 | 214 | 156 | 223 | 48 | 15 |
P value = 0.872 (Fisher's exact test), Q value = 1
Table S1552. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
OR2T35 MUTATED | 1 | 0 | 1 | 1 | 1 | 0 |
OR2T35 WILD-TYPE | 167 | 222 | 187 | 171 | 170 | 52 |
P value = 0.58 (Fisher's exact test), Q value = 1
Table S1553. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
OR2T35 MUTATED | 0 | 3 | 1 |
OR2T35 WILD-TYPE | 270 | 410 | 273 |
P value = 0.54 (Fisher's exact test), Q value = 1
Table S1554. Gene #143: 'OR2T35 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
OR2T35 MUTATED | 0 | 0 | 3 | 0 | 1 |
OR2T35 WILD-TYPE | 152 | 174 | 387 | 125 | 115 |
P value = 0.498 (Fisher's exact test), Q value = 1
Table S1555. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PPIL2 MUTATED | 1 | 1 | 1 | 3 | 0 |
PPIL2 WILD-TYPE | 366 | 225 | 90 | 238 | 37 |
P value = 0.678 (Fisher's exact test), Q value = 1
Table S1556. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PPIL2 MUTATED | 2 | 2 | 1 | 0 | 0 |
PPIL2 WILD-TYPE | 114 | 179 | 156 | 83 | 111 |
P value = 0.427 (Fisher's exact test), Q value = 1
Table S1557. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PPIL2 MUTATED | 3 | 0 | 0 | 1 | 2 | 0 | 0 |
PPIL2 WILD-TYPE | 176 | 135 | 215 | 155 | 223 | 48 | 15 |
P value = 0.674 (Fisher's exact test), Q value = 1
Table S1558. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PPIL2 MUTATED | 2 | 1 | 0 | 1 | 2 | 0 |
PPIL2 WILD-TYPE | 166 | 221 | 188 | 171 | 169 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1559. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PPIL2 MUTATED | 1 | 3 | 1 |
PPIL2 WILD-TYPE | 269 | 410 | 273 |
P value = 0.922 (Fisher's exact test), Q value = 1
Table S1560. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PPIL2 MUTATED | 1 | 1 | 2 | 0 | 1 |
PPIL2 WILD-TYPE | 151 | 173 | 388 | 125 | 115 |
P value = 0.0596 (Fisher's exact test), Q value = 1
Table S1561. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PPIL2 MUTATED | 0 | 3 | 0 |
PPIL2 WILD-TYPE | 248 | 214 | 187 |
P value = 0.711 (Fisher's exact test), Q value = 1
Table S1562. Gene #144: 'PPIL2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PPIL2 MUTATED | 1 | 0 | 0 | 1 | 1 | 0 |
PPIL2 WILD-TYPE | 114 | 63 | 189 | 116 | 107 | 60 |
P value = 0.072 (Fisher's exact test), Q value = 1
Table S1563. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ZNF397 MUTATED | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 |
ZNF397 WILD-TYPE | 21 | 37 | 114 | 97 | 107 | 73 | 18 | 39 |
P value = 0.849 (Fisher's exact test), Q value = 1
Table S1564. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ZNF397 MUTATED | 0 | 2 | 1 | 0 | 0 |
ZNF397 WILD-TYPE | 96 | 150 | 115 | 89 | 56 |
P value = 0.461 (Fisher's exact test), Q value = 1
Table S1565. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ZNF397 MUTATED | 2 | 4 | 0 | 1 | 0 |
ZNF397 WILD-TYPE | 365 | 222 | 91 | 240 | 37 |
P value = 0.594 (Fisher's exact test), Q value = 1
Table S1566. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ZNF397 MUTATED | 0 | 2 | 3 | 0 | 1 |
ZNF397 WILD-TYPE | 116 | 179 | 154 | 83 | 110 |
P value = 0.809 (Fisher's exact test), Q value = 1
Table S1567. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ZNF397 MUTATED | 0 | 1 | 2 | 2 | 2 | 0 | 0 |
ZNF397 WILD-TYPE | 179 | 134 | 213 | 154 | 223 | 48 | 15 |
P value = 0.393 (Fisher's exact test), Q value = 1
Table S1568. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ZNF397 MUTATED | 0 | 3 | 0 | 2 | 2 | 0 |
ZNF397 WILD-TYPE | 168 | 219 | 188 | 170 | 169 | 52 |
P value = 0.573 (Fisher's exact test), Q value = 1
Table S1569. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ZNF397 MUTATED | 3 | 3 | 1 |
ZNF397 WILD-TYPE | 267 | 410 | 273 |
P value = 0.321 (Fisher's exact test), Q value = 1
Table S1570. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ZNF397 MUTATED | 0 | 3 | 4 | 0 | 0 |
ZNF397 WILD-TYPE | 152 | 171 | 386 | 125 | 116 |
P value = 0.56 (Fisher's exact test), Q value = 1
Table S1571. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ZNF397 MUTATED | 2 | 2 | 0 |
ZNF397 WILD-TYPE | 246 | 215 | 187 |
P value = 0.523 (Fisher's exact test), Q value = 1
Table S1572. Gene #145: 'ZNF397 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ZNF397 MUTATED | 0 | 0 | 2 | 2 | 0 | 0 |
ZNF397 WILD-TYPE | 115 | 63 | 187 | 115 | 108 | 60 |
P value = 0.653 (Fisher's exact test), Q value = 1
Table S1573. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
MLL MUTATED | 0 | 2 | 2 | 1 | 1 | 2 | 0 | 1 |
MLL WILD-TYPE | 21 | 36 | 112 | 96 | 107 | 71 | 19 | 38 |
P value = 0.647 (Fisher's exact test), Q value = 1
Table S1574. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
MLL MUTATED | 1 | 5 | 2 | 1 | 0 |
MLL WILD-TYPE | 95 | 147 | 114 | 88 | 56 |
P value = 0.287 (Fisher's exact test), Q value = 1
Table S1575. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
MLL MUTATED | 3 | 5 | 2 | 7 | 0 |
MLL WILD-TYPE | 364 | 221 | 89 | 234 | 37 |
P value = 0.233 (Fisher's exact test), Q value = 1
Table S1576. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
MLL MUTATED | 5 | 1 | 3 | 1 | 2 |
MLL WILD-TYPE | 111 | 180 | 154 | 82 | 109 |
P value = 0.777 (Fisher's exact test), Q value = 1
Table S1577. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
MLL MUTATED | 3 | 1 | 2 |
MLL WILD-TYPE | 143 | 128 | 116 |
P value = 0.248 (Fisher's exact test), Q value = 1
Table S1578. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
MLL MUTATED | 1 | 1 | 1 | 1 | 2 |
MLL WILD-TYPE | 58 | 108 | 89 | 103 | 29 |
P value = 0.531 (Fisher's exact test), Q value = 1
Table S1579. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
MLL MUTATED | 5 | 2 | 1 | 4 | 4 | 0 | 0 |
MLL WILD-TYPE | 174 | 133 | 214 | 152 | 221 | 48 | 15 |
P value = 0.241 (Fisher's exact test), Q value = 1
Table S1580. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
MLL MUTATED | 5 | 4 | 0 | 3 | 3 | 1 |
MLL WILD-TYPE | 163 | 218 | 188 | 169 | 168 | 51 |
P value = 0.66 (Fisher's exact test), Q value = 1
Table S1581. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
MLL MUTATED | 3 | 7 | 6 |
MLL WILD-TYPE | 267 | 406 | 268 |
P value = 0.243 (Fisher's exact test), Q value = 1
Table S1582. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
MLL MUTATED | 0 | 5 | 6 | 3 | 2 |
MLL WILD-TYPE | 152 | 169 | 384 | 122 | 114 |
P value = 0.301 (Fisher's exact test), Q value = 1
Table S1583. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
MLL MUTATED | 4 | 1 | 4 |
MLL WILD-TYPE | 244 | 216 | 183 |
P value = 0.301 (Fisher's exact test), Q value = 1
Table S1584. Gene #146: 'MLL MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
MLL MUTATED | 4 | 1 | 2 | 2 | 0 | 0 |
MLL WILD-TYPE | 111 | 62 | 187 | 115 | 108 | 60 |
P value = 0.89 (Fisher's exact test), Q value = 1
Table S1585. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ACVR1B MUTATED | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 |
ACVR1B WILD-TYPE | 21 | 38 | 113 | 95 | 106 | 73 | 19 | 39 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1586. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ACVR1B MUTATED | 1 | 2 | 1 | 1 | 0 |
ACVR1B WILD-TYPE | 95 | 150 | 115 | 88 | 56 |
P value = 0.904 (Fisher's exact test), Q value = 1
Table S1587. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ACVR1B MUTATED | 2 | 2 | 0 | 2 | 0 |
ACVR1B WILD-TYPE | 365 | 224 | 91 | 239 | 37 |
P value = 0.87 (Fisher's exact test), Q value = 1
Table S1588. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ACVR1B MUTATED | 1 | 1 | 1 | 1 | 0 |
ACVR1B WILD-TYPE | 115 | 180 | 156 | 82 | 111 |
P value = 0.559 (Fisher's exact test), Q value = 1
Table S1589. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ACVR1B MUTATED | 2 | 2 | 0 |
ACVR1B WILD-TYPE | 144 | 127 | 118 |
P value = 0.097 (Fisher's exact test), Q value = 1
Table S1590. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ACVR1B MUTATED | 2 | 0 | 2 | 0 | 0 |
ACVR1B WILD-TYPE | 57 | 109 | 88 | 104 | 31 |
P value = 0.729 (Fisher's exact test), Q value = 1
Table S1591. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ACVR1B MUTATED | 3 | 0 | 2 | 1 | 1 | 0 | 0 |
ACVR1B WILD-TYPE | 176 | 135 | 213 | 155 | 224 | 48 | 15 |
P value = 0.369 (Fisher's exact test), Q value = 1
Table S1592. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ACVR1B MUTATED | 3 | 0 | 1 | 2 | 1 | 0 |
ACVR1B WILD-TYPE | 165 | 222 | 187 | 170 | 170 | 52 |
P value = 0.271 (Fisher's exact test), Q value = 1
Table S1593. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ACVR1B MUTATED | 0 | 4 | 3 |
ACVR1B WILD-TYPE | 270 | 409 | 271 |
P value = 0.589 (Fisher's exact test), Q value = 1
Table S1594. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ACVR1B MUTATED | 0 | 1 | 3 | 1 | 2 |
ACVR1B WILD-TYPE | 152 | 173 | 387 | 124 | 114 |
P value = 0.291 (Fisher's exact test), Q value = 1
Table S1595. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ACVR1B MUTATED | 1 | 0 | 2 |
ACVR1B WILD-TYPE | 247 | 217 | 185 |
P value = 0.589 (Fisher's exact test), Q value = 1
Table S1596. Gene #147: 'ACVR1B MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ACVR1B MUTATED | 1 | 0 | 1 | 0 | 0 | 1 |
ACVR1B WILD-TYPE | 114 | 63 | 188 | 117 | 108 | 59 |
P value = 1 (Fisher's exact test), Q value = 1
Table S1597. Gene #148: 'GPR158 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
GPR158 MUTATED | 1 | 1 | 0 | 1 | 0 |
GPR158 WILD-TYPE | 366 | 225 | 91 | 240 | 37 |
P value = 0.444 (Fisher's exact test), Q value = 1
Table S1598. Gene #148: 'GPR158 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
GPR158 MUTATED | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
GPR158 WILD-TYPE | 177 | 135 | 215 | 156 | 224 | 48 | 15 |
P value = 0.216 (Fisher's exact test), Q value = 1
Table S1599. Gene #148: 'GPR158 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
GPR158 MUTATED | 2 | 0 | 0 | 1 | 0 | 0 |
GPR158 WILD-TYPE | 166 | 222 | 188 | 171 | 171 | 52 |
P value = 0.114 (Fisher's exact test), Q value = 1
Table S1600. Gene #148: 'GPR158 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
GPR158 MUTATED | 2 | 0 | 1 |
GPR158 WILD-TYPE | 268 | 413 | 273 |
P value = 0.0762 (Fisher's exact test), Q value = 1
Table S1601. Gene #148: 'GPR158 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
GPR158 MUTATED | 2 | 0 | 0 | 1 | 0 |
GPR158 WILD-TYPE | 150 | 174 | 390 | 124 | 116 |
P value = 0.462 (Fisher's exact test), Q value = 1
Table S1602. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
ARHGEF15 MUTATED | 1 | 0 | 4 | 2 | 1 | 0 | 0 | 0 |
ARHGEF15 WILD-TYPE | 20 | 38 | 110 | 95 | 107 | 73 | 19 | 39 |
P value = 0.2 (Fisher's exact test), Q value = 1
Table S1603. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
ARHGEF15 MUTATED | 4 | 1 | 1 | 2 | 0 |
ARHGEF15 WILD-TYPE | 92 | 151 | 115 | 87 | 56 |
P value = 0.73 (Fisher's exact test), Q value = 1
Table S1604. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
ARHGEF15 MUTATED | 3 | 4 | 0 | 2 | 0 |
ARHGEF15 WILD-TYPE | 364 | 222 | 91 | 239 | 37 |
P value = 0.541 (Fisher's exact test), Q value = 1
Table S1605. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
ARHGEF15 MUTATED | 1 | 0 | 1 | 1 | 1 |
ARHGEF15 WILD-TYPE | 115 | 181 | 156 | 82 | 110 |
P value = 0.893 (Fisher's exact test), Q value = 1
Table S1606. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #5: 'RPPA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 146 | 129 | 118 |
ARHGEF15 MUTATED | 2 | 3 | 2 |
ARHGEF15 WILD-TYPE | 144 | 126 | 116 |
P value = 0.744 (Fisher's exact test), Q value = 1
Table S1607. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #6: 'RPPA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 59 | 109 | 90 | 104 | 31 |
ARHGEF15 MUTATED | 2 | 1 | 2 | 2 | 0 |
ARHGEF15 WILD-TYPE | 57 | 108 | 88 | 102 | 31 |
P value = 0.658 (Fisher's exact test), Q value = 1
Table S1608. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
ARHGEF15 MUTATED | 2 | 0 | 1 | 2 | 4 | 0 | 0 |
ARHGEF15 WILD-TYPE | 177 | 135 | 214 | 154 | 221 | 48 | 15 |
P value = 0.284 (Fisher's exact test), Q value = 1
Table S1609. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
ARHGEF15 MUTATED | 2 | 0 | 1 | 3 | 3 | 0 |
ARHGEF15 WILD-TYPE | 166 | 222 | 187 | 169 | 168 | 52 |
P value = 0.245 (Fisher's exact test), Q value = 1
Table S1610. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
ARHGEF15 MUTATED | 0 | 5 | 3 |
ARHGEF15 WILD-TYPE | 270 | 408 | 271 |
P value = 0.776 (Fisher's exact test), Q value = 1
Table S1611. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
ARHGEF15 MUTATED | 0 | 1 | 5 | 1 | 1 |
ARHGEF15 WILD-TYPE | 152 | 173 | 385 | 124 | 115 |
P value = 0.288 (Fisher's exact test), Q value = 1
Table S1612. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
ARHGEF15 MUTATED | 1 | 0 | 2 |
ARHGEF15 WILD-TYPE | 247 | 217 | 185 |
P value = 0.798 (Fisher's exact test), Q value = 1
Table S1613. Gene #149: 'ARHGEF15 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
ARHGEF15 MUTATED | 1 | 0 | 2 | 0 | 0 | 0 |
ARHGEF15 WILD-TYPE | 114 | 63 | 187 | 117 | 108 | 60 |
P value = 0.504 (Fisher's exact test), Q value = 1
Table S1614. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
TXNDC2 MUTATED | 2 | 0 | 1 | 1 | 0 |
TXNDC2 WILD-TYPE | 365 | 226 | 90 | 240 | 37 |
P value = 0.616 (Fisher's exact test), Q value = 1
Table S1615. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
TXNDC2 MUTATED | 2 | 1 | 1 | 0 | 0 |
TXNDC2 WILD-TYPE | 114 | 180 | 156 | 83 | 111 |
P value = 0.522 (Fisher's exact test), Q value = 1
Table S1616. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
TXNDC2 MUTATED | 1 | 0 | 1 | 2 | 0 | 0 | 0 |
TXNDC2 WILD-TYPE | 178 | 135 | 214 | 154 | 225 | 48 | 15 |
P value = 0.247 (Fisher's exact test), Q value = 1
Table S1617. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
TXNDC2 MUTATED | 1 | 0 | 1 | 1 | 0 | 1 |
TXNDC2 WILD-TYPE | 167 | 222 | 187 | 171 | 171 | 51 |
P value = 0.218 (Fisher's exact test), Q value = 1
Table S1618. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
TXNDC2 MUTATED | 0 | 1 | 3 |
TXNDC2 WILD-TYPE | 270 | 412 | 271 |
P value = 0.508 (Fisher's exact test), Q value = 1
Table S1619. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
TXNDC2 MUTATED | 0 | 0 | 2 | 1 | 1 |
TXNDC2 WILD-TYPE | 152 | 174 | 388 | 124 | 115 |
P value = 0.105 (Fisher's exact test), Q value = 1
Table S1620. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
TXNDC2 MUTATED | 1 | 0 | 3 |
TXNDC2 WILD-TYPE | 247 | 217 | 184 |
P value = 0.556 (Fisher's exact test), Q value = 1
Table S1621. Gene #150: 'TXNDC2 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
TXNDC2 MUTATED | 1 | 0 | 2 | 0 | 0 | 1 |
TXNDC2 WILD-TYPE | 114 | 63 | 187 | 117 | 108 | 59 |
P value = 0.359 (Fisher's exact test), Q value = 1
Table S1622. Gene #151: 'COL9A2 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
COL9A2 MUTATED | 0 | 1 | 0 | 2 | 0 |
COL9A2 WILD-TYPE | 367 | 225 | 91 | 239 | 37 |
P value = 0.215 (Fisher's exact test), Q value = 1
Table S1623. Gene #151: 'COL9A2 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
COL9A2 MUTATED | 2 | 0 | 1 | 0 | 0 |
COL9A2 WILD-TYPE | 114 | 181 | 156 | 83 | 111 |
P value = 0.418 (Fisher's exact test), Q value = 1
Table S1624. Gene #151: 'COL9A2 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
COL9A2 MUTATED | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
COL9A2 WILD-TYPE | 177 | 135 | 214 | 156 | 225 | 48 | 15 |
P value = 0.203 (Fisher's exact test), Q value = 1
Table S1625. Gene #151: 'COL9A2 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
COL9A2 MUTATED | 2 | 0 | 0 | 0 | 1 | 0 |
COL9A2 WILD-TYPE | 166 | 222 | 188 | 172 | 170 | 52 |
P value = 0.735 (Fisher's exact test), Q value = 1
Table S1626. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #1: 'MRNA_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 21 | 38 | 114 | 97 | 108 | 73 | 19 | 39 |
PARP4 MUTATED | 0 | 0 | 1 | 0 | 1 | 2 | 0 | 0 |
PARP4 WILD-TYPE | 21 | 38 | 113 | 97 | 107 | 71 | 19 | 39 |
P value = 0.82 (Fisher's exact test), Q value = 1
Table S1627. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #2: 'MRNA_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 96 | 152 | 116 | 89 | 56 |
PARP4 MUTATED | 1 | 1 | 2 | 0 | 0 |
PARP4 WILD-TYPE | 95 | 151 | 114 | 89 | 56 |
P value = 0.454 (Fisher's exact test), Q value = 1
Table S1628. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #3: 'CN_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 367 | 226 | 91 | 241 | 37 |
PARP4 MUTATED | 5 | 2 | 3 | 2 | 0 |
PARP4 WILD-TYPE | 362 | 224 | 88 | 239 | 37 |
P value = 0.149 (Fisher's exact test), Q value = 1
Table S1629. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #4: 'METHLYATION_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 116 | 181 | 157 | 83 | 111 |
PARP4 MUTATED | 0 | 2 | 3 | 0 | 4 |
PARP4 WILD-TYPE | 116 | 179 | 154 | 83 | 107 |
P value = 0.19 (Fisher's exact test), Q value = 1
Table S1630. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #7: 'MRNASEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 179 | 135 | 215 | 156 | 225 | 48 | 15 |
PARP4 MUTATED | 0 | 1 | 3 | 5 | 2 | 1 | 0 |
PARP4 WILD-TYPE | 179 | 134 | 212 | 151 | 223 | 47 | 15 |
P value = 0.0595 (Fisher's exact test), Q value = 1
Table S1631. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #8: 'MRNASEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 168 | 222 | 188 | 172 | 171 | 52 |
PARP4 MUTATED | 0 | 4 | 1 | 6 | 1 | 0 |
PARP4 WILD-TYPE | 168 | 218 | 187 | 166 | 170 | 52 |
P value = 0.0487 (Fisher's exact test), Q value = 1
Table S1632. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 270 | 413 | 274 |
PARP4 MUTATED | 5 | 7 | 0 |
PARP4 WILD-TYPE | 265 | 406 | 274 |
Figure S188. Get High-res Image Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #9: 'MIRSEQ_CNMF'
![](D152V9.png)
P value = 0.47 (Fisher's exact test), Q value = 1
Table S1633. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #10: 'MIRSEQ_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 152 | 174 | 390 | 125 | 116 |
PARP4 MUTATED | 2 | 1 | 8 | 0 | 1 |
PARP4 WILD-TYPE | 150 | 173 | 382 | 125 | 115 |
P value = 0.181 (Fisher's exact test), Q value = 1
Table S1634. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #11: 'MIRSEQ_MATURE_CNMF'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 248 | 217 | 187 |
PARP4 MUTATED | 4 | 4 | 0 |
PARP4 WILD-TYPE | 244 | 213 | 187 |
P value = 0.494 (Fisher's exact test), Q value = 1
Table S1635. Gene #152: 'PARP4 MUTATION STATUS' versus Molecular Subtype #12: 'MIRSEQ_MATURE_CHIERARCHICAL'
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 115 | 63 | 189 | 117 | 108 | 60 |
PARP4 MUTATED | 0 | 1 | 3 | 1 | 3 | 0 |
PARP4 WILD-TYPE | 115 | 62 | 186 | 116 | 105 | 60 |
-
Mutation data file = transformed.cor.cli.txt
-
Molecular subtypes file = BRCA-TP.transferedmergedcluster.txt
-
Number of patients = 976
-
Number of significantly mutated genes = 152
-
Number of Molecular subtypes = 12
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.