gene1	gene2	pval	qval
KDM6A	MLL2	0.00178	1
FAT1	Del_8p23.1	0.00272	1
Amp_7p21.1	Del_9p21.3	0.00391	1
17p-Del	Amp_6p22.3	0.00425	1
TP53	Del_9p21.3	0.00477	1
RB1	Del_9p23	0.00584	1
Amp_7p11.2	Del_9p23	0.00596	1
TP53	Del_9q33.2	0.0082	1
FAT1	Amp_5p15.33	0.00946	1
ARID1A	STAG2	0.0132	1
ARID1A	Del_16q23.1	0.0132	1
Amp_7p21.1	Del_11q23.3	0.0155	1
RB1	9p-Del	0.018	1
FAT1	Amp_6p22.3	0.0185	1
Amp_7p11.2	Del_9q33.2	0.0192	1
Amp_6p22.3	Del_9p21.3	0.0203	1
FGFR3	Amp_10p14	0.0232	1
11p-Del	Amp_7p11.2	0.024	1
9p-Del	Amp_7p11.2	0.024	1
FAT1	Amp_20q11.21	0.0255	1
ARID1A	Del_10q23.31	0.0286	1
KDM6A	4p-Del	0.0291	1
TP53	9q-Del	0.0297	1
FAT1	8p-Del	0.0299	1
FAT1	Amp_10p14	0.0299	1
FBXW7	Del_11p15.5	0.0332	1
FAT1	Amp_7p11.2	0.035	1
NFE2L2	Amp_3p25.2	0.0351	1
3q-Amp	Amp_5p15.33	0.0351	1
Amp_6p22.3	Del_9q33.2	0.036	1
RB1	9q-Del	0.0366	1
MLL	Del_11q25	0.0366	1
MLL2	Amp_16p11.2	0.0386	1
PIK3CA	Amp_7p21.1	0.0388	1
Amp_7p21.1	Del_9q33.2	0.0388	1
Amp_7p11.2	Del_9p21.3	0.0395	1
11q-Del	Del_8p23.1	0.041	1
7p-Amp	Del_9p21.3	0.0413	1
Amp_6p22.3	Del_9p23	0.0426	1
KLF5	Del_17p12	0.0432	1
TXNIP	Del_9p21.3	0.0438	1
Amp_9p24.1	Del_9p21.3	0.0438	1
SPTAN1	Amp_7p11.2	0.0444	1
STAG2	Amp_7p11.2	0.0444	1
ELF3	Del_11p15.5	0.0447	1
CREBBP	Del_11q25	0.0451	1
11p-Del	Amp_7p21.1	0.0467	1
9p-Del	Amp_7p21.1	0.0467	1
FAT1	Amp_19q12	0.0477	1
CDKN1A	Amp_8q22.3	0.0478	1
KLF5	Amp_3p25.2	0.0483	1
ERCC2	Del_9p21.3	0.0488	1
5p-Amp	Del_9p21.3	0.0488	1
FGFR3	Amp_3p25.2	0.05	1
11q-Del	Amp_8p11.23	0.0512	1
KDM6A	Del_18q23	0.0514	1
KDM6A	KLF5	0.0539	1
KDM6A	4q-Del	0.0539	1
FBXW7	Del_9q33.2	0.0554	1
ARID1A	PIK3CA	0.0555	1
Amp_13q22.1	Del_5q12.1	0.0556	1
9q-Del	Amp_7p11.2	0.0561	1
NFE2L2	Amp_6p22.3	0.0567	1
TSC1	Amp_6p22.3	0.0567	1
TP53	Del_1p36.11	0.0598	1
FBXW7	9p-Del	0.0628	1
Amp_7p21.1	Del_9p23	0.0653	1
ARID1A	FAT1	0.0655	1
FAT1	Amp_3p25.2	0.0655	1
ERBB3	MLL2	0.0666	1
EP300	STAG2	0.0683	1
SPTAN1	Amp_7p21.1	0.0683	1
STAG2	Amp_7p21.1	0.0683	1
8p-Del	Del_9p21.3	0.0685	1
Amp_3p25.2	Del_9p21.3	0.0686	1
ARID1A	Del_13q14.2	0.0706	1
MLL	Amp_11q13.3	0.0724	1
5p-Amp	Del_6q27	0.073	1
KDM6A	Amp_16p13.2	0.0732	1
PHLDA3	Del_9p21.3	0.0742	1
Amp_6q23.3	Del_9p21.3	0.0742	1
KLF5	Amp_6p22.3	0.0745	1
KDM6A	18q-Del	0.0748	1
FAT1	Amp_1q21.3	0.0748	1
Amp_13q22.1	Del_9p23	0.0748	1
8q-Amp	17p-Del	0.0785	1
NFE2L2	Amp_10p14	0.0801	1
8p-Del	Amp_4p16.3	0.0801	1
PIK3CA	Del_11p15.5	0.0809	1
8p-Del	Del_9p23	0.0835	1
9q-Del	Del_6p25.3	0.0837	1
FGFR3	RB1	0.0855	1
FGFR3	Del_2q34	0.0855	1
RB1	Amp_12q15	0.0855	1
MLL	Amp_12q15	0.0855	1
FGFR3	Amp_8q22.3	0.0856	1
FAT1	Amp_8p11.23	0.087	1
Amp_13q22.1	Del_10q23.31	0.087	1
11q-Del	8p-Del	0.0875	1
MLL2	TP53	0.0884	1
17p-Del	Amp_8q22.3	0.0891	1
FAT1	Amp_1q23.3	0.0892	1
ARID1A	Amp_12p12.1	0.0907	1
GPC5	Amp_5p15.33	0.0907	1
Amp_5p15.33	Del_12p13.1	0.0907	1
FBXW7	Amp_19q12	0.0908	1
FBXW7	Del_9p21.3	0.0923	1
PIK3CA	Del_16p13.3	0.093	1
RB1	Del_9q33.2	0.093	1
3q-Amp	Del_8p23.1	0.0935	1
Amp_4p16.3	Del_8p23.1	0.0935	1
9q-Del	Amp_7p21.1	0.0949	1
Amp_7p21.1	Del_11q25	0.0949	1
FGFR3	TP53	0.0956	1
ERBB3	Amp_1q21.3	0.0962	1
Del_9p23	Del_16q23.1	0.0962	1
TP53	9p-Del	0.0973	1
GPC5	Amp_1q21.3	0.0989	1
KDM6A	Amp_12p12.1	0.0989	1
Amp_9p24.1	Del_9p23	0.0989	1
5p-Amp	Amp_12q15	0.0999	1
5p-Amp	Del_19p13.3	0.0999	1
Amp_12q15	Del_19p13.3	0.0999	1
RB1	FAT1	0.101	1
FAT1	Amp_11q13.3	0.101	1
FAT1	Del_16p13.3	0.101	1
11q-Del	Amp_7p11.2	0.101	1
Amp_8p11.23	Del_2q37.1	0.101	1
Amp_11q13.3	Amp_13q22.1	0.101	1
FBXW7	9q-Del	0.102	1
FBXW7	Del_5q12.1	0.102	1
KLF5	8p-Del	0.102	1
RXRA	9q-Del	0.102	1
11p-Del	Amp_1p34.2	0.102	1
9p-Del	Amp_1p34.2	0.102	1
TSC1	Amp_8q22.3	0.103	1
ERBB3	Amp_8p11.23	0.104	1
ZFP36L1	Del_8p23.1	0.105	1
9q-Del	Amp_6p22.3	0.105	1
MLL	11p-Del	0.107	1
MLL2	Del_9q33.2	0.108	1
NFE2L2	TP53	0.108	1
TP53	TSC1	0.108	1
TP53	Amp_4p16.3	0.108	1
Amp_9p24.1	Del_11p15.5	0.108	1
20p-Amp	Amp_3p25.2	0.11	1
ELF3	Amp_19q12	0.112	1
NFE2L2	Amp_19q12	0.112	1
ZFP36L1	Amp_8q22.3	0.112	1
ARID1A	Del_3p14.2	0.113	1
FAT1	Amp_8q22.3	0.113	1
11q-Del	Amp_5p15.33	0.113	1
Amp_1p34.2	Del_2q37.1	0.113	1
ERCC2	Amp_20q11.21	0.114	1
ERCC2	Del_9q33.2	0.114	1
PIK3CA	Amp_12q15	0.114	1
5p-Amp	Amp_20q11.21	0.114	1
CDKN1A	Amp_1q23.3	0.115	1
FBXW7	17p-Del	0.115	1
17p-Del	Amp_22q12.2	0.115	1
FAT1	5p-Amp	0.117	1
FAT1	Amp_12q15	0.117	1
FAT1	Del_4q34.2	0.117	1
FAT1	Del_19p13.3	0.117	1
20q-Amp	5p-Amp	0.117	1
18q-Del	Amp_12q15	0.117	1
Amp_13q22.1	Del_19p13.3	0.117	1
PIK3CA	Amp_19q12	0.118	1
Amp_19q12	Del_9q33.2	0.118	1
ERBB3	Amp_11q13.3	0.119	1
STAG2	Del_2q34	0.119	1
EP300	Del_9p21.3	0.123	1
KDM6A	5q-Del	0.123	1
Amp_8p11.23	Del_6p25.3	0.123	1
ARID1A	CDKN2A	0.124	1
FOXA1	Amp_5p15.33	0.124	1
MIPOL1	Amp_5p15.33	0.124	1
EP300	Amp_4p16.3	0.125	1
TSC1	Amp_7p21.1	0.125	1
3q-Amp	Del_5q12.1	0.125	1
7p-Amp	Del_11q23.3	0.125	1
7p-Amp	Del_11q25	0.125	1
FBXW7	Del_17p12	0.128	1
KLF5	Del_8p23.1	0.128	1
CREBBP	11p-Del	0.13	1
Amp_10p14	Del_19p13.3	0.13	1
Del_8p23.1	Del_9p21.3	0.13	1
HRAS	Del_9p21.3	0.131	1
Amp_4q13.3	Del_9p21.3	0.131	1
FOXQ1	KDM6A	0.133	1
3p-Amp	Amp_1q21.3	0.133	1
CDKN1A	Amp_19q12	0.135	1
KDM6A	Amp_5p15.33	0.135	1
FAT1	20q-Amp	0.135	1
FAT1	Amp_13q22.1	0.135	1
20q-Amp	Amp_13q22.1	0.135	1
18q-Del	Amp_17q11.2	0.135	1
CREBBP	ERBB3	0.136	1
ERBB3	5p-Amp	0.136	1
FGFR3	8q-Amp	0.136	1
STAG2	5p-Amp	0.136	1
STAG2	Amp_6p22.3	0.136	1
KLF5	Amp_19q12	0.138	1
11p-Del	Amp_6p22.3	0.138	1
9p-Del	Amp_6p22.3	0.138	1
Amp_1p34.2	Del_18q23	0.138	1
RB1	Amp_2p25.1	0.139	1
MLL	6q-Del	0.139	1
Amp_4p16.3	Del_13q14.2	0.139	1
Del_6p25.3	Del_16p13.3	0.139	1
KLF5	Amp_8q22.3	0.14	1
PIK3CA	Amp_13q22.1	0.14	1
MLL	Amp_5p15.33	0.141	1
ARID1A	4p-Del	0.142	1
ARID1A	Amp_17q12	0.142	1
FBXW7	Amp_5p15.33	0.142	1
FOXQ1	Del_11p15.5	0.144	1
CDKN1A	Amp_17q12	0.146	1
FBXW7	Amp_17q23.3	0.146	1
FBXW7	Del_10q23.31	0.146	1
RXRA	Amp_8p11.23	0.146	1
FGFR3	Amp_7p11.2	0.147	1
FGFR3	Del_2q37.1	0.147	1
Amp_3p25.2	Amp_20q11.21	0.149	1
GPC5	Del_9q33.2	0.151	1
PIK3CA	Amp_12p12.1	0.151	1
TPTE	Del_9q33.2	0.151	1
EP300	KLF5	0.152	1
KLF5	9q-Del	0.152	1
MLL2	17p-Del	0.153	1
CDKN1A	Amp_3q26.33	0.155	1
CDKN1A	Amp_7p21.1	0.155	1
ERBB3	Amp_13q22.1	0.155	1
SPTAN1	Amp_13q22.1	0.155	1
STAG2	18q-Del	0.155	1
STAG2	Amp_17q11.2	0.155	1
FAT1	8q-Amp	0.155	1
11q-Del	Amp_7p21.1	0.155	1
Amp_8p11.23	Del_11q23.3	0.155	1
Amp_8p11.23	Del_11q25	0.155	1
Amp_13q22.1	Del_16q23.1	0.155	1
CREBBP	Del_17p12	0.156	1
RXRA	Del_9p23	0.156	1
CREBBP	Amp_2p25.1	0.158	1
CREBBP	Amp_19q13.43	0.158	1
ERCC2	20p-Amp	0.158	1
FGFR3	Del_6p25.3	0.158	1
KDM6A	RB1	0.158	1
KDM6A	Del_2q34	0.158	1
ZFP36L1	Del_17p12	0.158	1
20p-Amp	5p-Amp	0.158	1
5p-Amp	5q-Del	0.158	1
5p-Amp	6q-Del	0.158	1
5p-Amp	Amp_19q13.43	0.158	1
5p-Amp	Del_6p25.3	0.158	1
Amp_11q22.2	Del_17p12	0.158	1
Amp_12q15	Del_6p25.3	0.158	1
Del_9p23	Del_16p13.3	0.158	1
PIK3CA	Del_9q33.2	0.16	1
TP53	Del_11p15.5	0.16	1
RBM26	Amp_1q23.3	0.161	1
ARID1A	EP300	0.162	1
ARID1A	Amp_7p21.1	0.162	1
ARID1A	Del_5q12.1	0.162	1
EP300	Amp_5p15.33	0.162	1
EP300	11p-Del	0.164	1
EP300	Amp_10p14	0.164	1
FBXW7	Del_2q34	0.164	1
FBXW7	Del_16p13.3	0.164	1
RB1	Amp_17q12	0.164	1
TPTE	11p-Del	0.164	1
TXNIP	Amp_10p14	0.164	1
11p-Del	Amp_9p24.1	0.164	1
9p-Del	Amp_9p24.1	0.164	1
Amp_11q13.3	Amp_22q12.2	0.164	1
7p-Amp	Del_17p12	0.165	1
15q-Del	Amp_6p22.3	0.167	1
ARID1A	HRAS	0.168	1
KLF5	17p-Del	0.168	1
ZFP36L1	Amp_3p25.2	0.168	1
17p-Del	Amp_1p34.2	0.168	1
Amp_4q13.3	Amp_5p15.33	0.168	1
Del_9p21.3	Del_22q13.32	0.168	1
20p-Amp	Amp_6p22.3	0.169	1
Amp_16p13.2	Del_18q23	0.17	1
ARID1A	MLL2	0.171	1
TSC1	Del_10q23.31	0.173	1
3q-Amp	Amp_17q23.3	0.173	1
7p-Amp	Del_6q27	0.173	1
10q-Del	Amp_17q23.3	0.173	1
Amp_8p11.23	Del_2q22.1	0.173	1
ARID1A	FGFR3	0.174	1
ARID1A	Del_19p13.3	0.174	1
FGFR3	Amp_5p15.33	0.174	1
MLL2	18q-Del	0.175	1
TXNIP	Amp_7p11.2	0.177	1
20q-Amp	Del_2q37.1	0.177	1
9q-Del	Amp_8q22.3	0.177	1
RB1	Del_11p15.5	0.178	1
KDM6A	Amp_11q22.2	0.179	1
FAT1	20p-Amp	0.179	1
FAT1	6q-Del	0.179	1
5q-Del	Amp_13q22.1	0.179	1
Amp_4q13.3	Del_9p23	0.179	1
Amp_13q22.1	Del_6p25.3	0.179	1
Amp_13q22.1	Del_22q13.32	0.179	1
ARID1A	10q-Del	0.18	1
ARID1A	Del_15q13.1	0.18	1
NFE2L2	Amp_5p15.33	0.18	1
TSC1	Amp_3p25.2	0.18	1
10q-Del	Amp_3p25.2	0.18	1
RB1	Del_11q23.3	0.182	1
MLL	Del_5q12.1	0.182	1
MLL	Del_11q23.3	0.182	1
Amp_7p21.1	Amp_11q13.3	0.182	1
CREBBP	RXRA	0.183	1
CREBBP	4p-Del	0.183	1
CREBBP	Amp_22q12.2	0.183	1
ERCC2	4p-Del	0.183	1
FBXW7	FGFR3	0.183	1
FBXW7	5p-Amp	0.183	1
FBXW7	Del_4q34.2	0.183	1
FBXW7	Del_19p13.3	0.183	1
FGFR3	Amp_17q12	0.183	1
FGFR3	Amp_22q12.2	0.183	1
7q-Amp	Del_19p13.3	0.183	1
RB1	Amp_8q22.3	0.185	1
Amp_8q22.3	Del_2q34	0.185	1
11q-Del	Amp_6p22.3	0.186	1
Amp_7p11.2	Del_17p12	0.186	1
CREBBP	Del_18q23	0.188	1
EP300	Del_2q37.1	0.188	1
Amp_7p11.2	Del_5q12.1	0.188	1
Amp_7p11.2	Del_11q23.3	0.188	1
STAG2	8p-Del	0.189	1
9p-Del	Del_16q23.1	0.189	1
20p-Amp	Amp_8q22.3	0.19	1
HRAS	Del_11p15.5	0.191	1
ZFP36L1	Del_11p15.5	0.191	1
Amp_11q22.2	Del_11p15.5	0.191	1
ELF3	RB1	0.192	1
FOXQ1	Del_9q33.2	0.192	1
NFE2L2	RB1	0.192	1
PIK3CA	17q-Amp	0.192	1
PIK3CA	3p-Amp	0.192	1
PIK3CA	Del_1p36.11	0.192	1
RB1	TSC1	0.192	1
MLL	Del_2q22.1	0.192	1
MLL	Del_4q22.1	0.192	1
Amp_4p16.3	Del_16p13.3	0.192	1
CREBBP	Amp_1q21.3	0.194	1
FAT1	Del_17p12	0.194	1
KDM6A	NFE2L2	0.197	1
NFE2L2	Amp_1q21.3	0.197	1
3q-Amp	Amp_1q21.3	0.197	1
7p-Amp	Amp_1q21.3	0.197	1
Amp_1q21.3	Amp_4p16.3	0.197	1
TP53	11p-Del	0.198	1
STAG2	Del_6p25.3	0.202	1
KLF5	Del_3p14.2	0.204	1
MLL2	16p-Del	0.204	1
11q-Del	Amp_1p34.2	0.204	1
4q-Del	Amp_8p11.23	0.204	1
Amp_1p34.2	Del_6q27	0.204	1
FBXW7	18q-Del	0.205	1
FAT1	7q-Amp	0.205	1
FAT1	4p-Del	0.205	1
18q-Del	Amp_17q12	0.205	1
4p-Del	Amp_1q23.3	0.205	1
Amp_13q22.1	Del_14q24.1	0.205	1
Del_6p25.3	Del_9q33.2	0.206	1
Del_9q33.2	Del_22q13.32	0.206	1
CDKN2A	8p-Del	0.207	1
FOXQ1	11p-Del	0.207	1
FOXQ1	9p-Del	0.207	1
MIPOL1	9p-Del	0.207	1
TXNIP	Amp_19q12	0.208	1
STAG2	Del_2q37.1	0.21	1
8q-Amp	Amp_7p11.2	0.21	1
Amp_1p34.2	Del_9p21.3	0.211	1
CREBBP	Del_11q23.3	0.212	1
EP300	Amp_12q15	0.212	1
ERCC2	9q-Del	0.212	1
ERCC2	Del_5q12.1	0.212	1
FGFR3	Amp_7p21.1	0.212	1
5p-Amp	Del_11q23.3	0.212	1
CREBBP	Del_4q22.1	0.213	1
ELF3	Amp_12q15	0.213	1
ERCC2	Del_2q22.1	0.213	1
FGFR3	Del_2q22.1	0.213	1
NFE2L2	5p-Amp	0.213	1
MLL	Del_9p21.3	0.213	1
3q-Amp	5p-Amp	0.213	1
5p-Amp	Del_2q22.1	0.213	1
7p-Amp	Del_19p13.3	0.213	1
Del_2q22.1	Del_4q34.2	0.213	1
ARID1A	20q-Amp	0.214	1
PIK3CA	Amp_1q23.3	0.214	1
CREBBP	Del_11p15.5	0.215	1
PHLDA3	Amp_1q23.3	0.215	1
RAD51C	Amp_1q23.3	0.215	1
PIK3CA	Del_9p21.3	0.217	1
8p-Del	9p-Del	0.217	1
GPC5	Amp_1q23.3	0.218	1
PIK3CA	Amp_7p11.2	0.218	1
Amp_8q22.3	Del_13q14.2	0.218	1
CX3CL1	Del_9p21.3	0.219	1
TP53	Del_9p23	0.219	1
ECM1	Del_9p21.3	0.219	1
17p-Del	Amp_7p11.2	0.219	1
FAT1	Del_18q23	0.221	1
Amp_17q11.2	Del_18q23	0.221	1
FOXA1	Amp_7p11.2	0.222	1
MIPOL1	Amp_7p11.2	0.222	1
15q-Del	Amp_7p11.2	0.222	1
Amp_1p34.2	Del_2q34	0.224	1
EP300	Amp_12p12.1	0.225	1
EP300	Del_12p13.1	0.225	1
GPC5	9q-Del	0.225	1
GPC5	Del_5q12.1	0.225	1
TPTE	Del_11q23.3	0.225	1
TPTE	Del_11q25	0.225	1
TXNIP	Amp_7p21.1	0.225	1
Amp_3q26.33	Amp_9p24.1	0.225	1
MIPOL1	TP53	0.226	1
PHLDA3	Del_8p23.1	0.226	1
5q-Del	Amp_10p14	0.227	1
9p-Del	Amp_19q13.43	0.227	1
ARID1A	4q-Del	0.228	1
CX3CL1	Amp_5p15.33	0.228	1
KLF5	Amp_5p15.33	0.228	1
CEP192	Amp_3p25.2	0.228	1
Amp_6p22.3	Del_18q23	0.228	1
MLL2	11q-Del	0.229	1
MLL2	Amp_17q23.3	0.229	1
FBXW7	STAG2	0.23	1
SPTAN1	7q-Amp	0.23	1
SPTAN1	Amp_22q12.2	0.23	1
STAG2	7q-Amp	0.23	1
STAG2	Amp_17q12	0.23	1
STAG2	Amp_22q12.2	0.23	1
8q-Amp	4p-Del	0.23	1
CDKN1A	Amp_17q23.3	0.231	1
Amp_8q22.3	Del_19p13.3	0.231	1
GPC5	Del_8p23.1	0.233	1
CDKN1A	TP53	0.234	1
CDKN1A	Amp_20q11.21	0.235	1
PIK3CA	Amp_17q23.3	0.235	1
ELF3	20q-Amp	0.236	1
NFE2L2	Amp_17q11.2	0.236	1
PHLDA3	Amp_8q22.3	0.236	1
TSC1	20q-Amp	0.236	1
TSC1	Amp_13q22.1	0.236	1
FAT1	7p-Amp	0.236	1
RAD51C	Amp_8q22.3	0.236	1
7p-Amp	Amp_17q11.2	0.236	1
10q-Del	Amp_13q22.1	0.236	1
10q-Del	Amp_17q11.2	0.236	1
18q-Del	Amp_4p16.3	0.236	1
Amp_4p16.3	Amp_13q22.1	0.236	1
CREBBP	17p-Del	0.238	1
CREBBP	Del_13q14.2	0.238	1
Amp_1q23.3	Amp_13q22.1	0.239	1
CX3CL1	Del_9p23	0.24	1
KDM6A	CEP192	0.24	1
ECM1	Del_9p23	0.24	1
7q-Amp	Del_9p21.3	0.24	1
RBM26	Del_3p14.2	0.241	1
RBM26	Del_6q27	0.241	1
KDM6A	Del_2q37.1	0.242	1
TXNIP	Del_13q14.2	0.243	1
17p-Del	Amp_9p24.1	0.243	1
HRAS	Amp_20q11.21	0.245	1
HRAS	Del_9q33.2	0.245	1
PIK3CA	Amp_11q22.2	0.245	1
ZFP36L1	Amp_20q11.21	0.245	1
ZFP36L1	Del_9q33.2	0.245	1
Amp_4q13.3	Amp_20q11.21	0.245	1
Amp_11q22.2	Del_9q33.2	0.245	1
Amp_19q12	Del_11q23.3	0.245	1
CREBBP	KLF5	0.246	1
CREBBP	4q-Del	0.246	1
CREBBP	Amp_16p11.2	0.246	1
EP300	Amp_13q22.1	0.246	1
ERCC2	KLF5	0.246	1
ERCC2	4q-Del	0.246	1
ERCC2	Amp_16p11.2	0.246	1
FGFR3	Amp_1p34.2	0.246	1
FGFR3	Amp_16p11.2	0.246	1
KDM6A	Amp_16p11.2	0.246	1
KLF5	Del_4q34.2	0.246	1
FAT1	Amp_3q26.33	0.246	1
FAT1	Amp_7p21.1	0.246	1
5p-Amp	Amp_16p11.2	0.246	1
Amp_1p34.2	Del_9p23	0.246	1
Amp_1p34.2	Del_19p13.3	0.246	1
Amp_12q15	Amp_16p11.2	0.246	1
Amp_16p11.2	Del_4q34.2	0.246	1
FBXW7	Amp_20q11.21	0.248	1
PIK3CA	7q-Amp	0.248	1
PIK3CA	4p-Del	0.248	1
PIK3CA	Amp_22q12.2	0.248	1
20p-Amp	Del_2q37.1	0.249	1
MLL2	Amp_16p13.2	0.25	1
ECM1	Del_11p15.5	0.253	1
10q-Del	Amp_6p22.3	0.253	1
Amp_6p22.3	Del_2q22.1	0.253	1
ARID1A	Del_9p21.3	0.254	1
TP53	RBM26	0.254	1
FOXA1	Del_18q23	0.255	1
MIPOL1	Amp_19q12	0.255	1
MIPOL1	Del_18q23	0.255	1
FBXW7	5q-Del	0.257	1
4p-Del	Del_6p25.3	0.257	1
Amp_17q12	Del_22q13.32	0.257	1
STAG2	Amp_19q12	0.258	1
STAG2	Del_18q23	0.258	1
FAT1	Del_11p15.5	0.259	1
ARID1A	8q-Amp	0.26	1
ERBB3	Amp_5p15.33	0.26	1
HRAS	11p-Del	0.26	1
HRAS	9p-Del	0.26	1
STAG2	Amp_5p15.33	0.26	1
ZFP36L1	8p-Del	0.26	1
11p-Del	Amp_4q13.3	0.26	1
11p-Del	Amp_11q22.2	0.26	1
8p-Del	Amp_11q22.2	0.26	1
9p-Del	Amp_4q13.3	0.26	1
ELF3	Del_16q23.1	0.261	1
ERBB3	NFE2L2	0.261	1
ERBB3	3q-Amp	0.261	1
ERBB3	Amp_4p16.3	0.261	1
NFE2L2	Del_16q23.1	0.261	1
SPTAN1	7p-Amp	0.261	1
SPTAN1	Del_2q22.1	0.261	1
STAG2	TSC1	0.261	1
STAG2	7p-Amp	0.261	1
STAG2	Del_2q22.1	0.261	1
TSC1	8q-Amp	0.261	1
3q-Amp	Del_16q23.1	0.261	1
8q-Amp	10q-Del	0.261	1
8q-Amp	Del_2q22.1	0.261	1
Amp_4p16.3	Del_16q23.1	0.261	1
ASXL2	RB1	0.262	1
ASXL2	Amp_11q13.3	0.262	1
ASXL2	Del_2q34	0.262	1
MLL	Amp_16p13.2	0.262	1
RBM26	Del_16p13.3	0.262	1
11p-Del	Amp_8p11.23	0.262	1
CDKN1A	MLL	0.263	1
RB1	Amp_17q23.3	0.263	1
RB1	Del_3p14.2	0.263	1
MLL	11q-Del	0.263	1
Amp_11q13.3	Amp_17q23.3	0.263	1
FGFR3	Amp_6p22.3	0.264	1
NFE2L2	Amp_1q23.3	0.264	1
7p-Amp	Amp_1q23.3	0.264	1
Amp_1q23.3	Del_4q22.1	0.264	1
Amp_1p34.2	Del_11p15.5	0.265	1
Del_9p21.3	Del_16q23.1	0.265	1
RBM26	Del_17p12	0.267	1
MLL2	6q-Del	0.268	1
RHOB	Del_9p21.3	0.268	1
FBXW7	11p-Del	0.27	1
RXRA	9p-Del	0.27	1
RXRA	Amp_10p14	0.27	1
FAT1	4q-Del	0.271	1
FAT1	Amp_16p11.2	0.271	1
18q-Del	Amp_1p34.2	0.271	1
18q-Del	Amp_16p11.2	0.271	1
Amp_3p25.2	Del_9p23	0.271	1
Amp_13q22.1	Amp_16p11.2	0.271	1
FOXA1	Amp_7p21.1	0.273	1
FOXQ1	9q-Del	0.273	1
MIPOL1	9q-Del	0.273	1
MIPOL1	Amp_7p21.1	0.273	1
MIPOL1	Del_11q25	0.273	1
FAT1	Del_13q14.2	0.273	1
3p-Amp	Del_5q12.1	0.273	1
Amp_7p11.2	Del_11p15.5	0.273	1
PIK3CA	Amp_11q13.3	0.274	1
PIK3CA	Del_2q34	0.274	1
MLL	Del_9q33.2	0.274	1
Amp_8q22.3	Del_9q33.2	0.274	1
MLL2	Del_17p12	0.275	1
MLL2	RB1	0.276	1
Amp_11p13	Del_9p21.3	0.276	1
Del_7q36.3	Del_9p21.3	0.276	1
BTG2	Amp_7p11.2	0.277	1
Amp_4q13.3	Del_2q37.1	0.277	1
EP300	MLL2	0.279	1
MLL2	9q-Del	0.279	1
MLL2	Del_11q25	0.279	1
MLL2	11p-Del	0.28	1
MLL2	9p-Del	0.28	1
ARID1A	CDKN1A	0.281	1
ARID1A	Del_8p23.1	0.282	1
CDKN1A	GPC5	0.283	1
CDKN1A	Amp_12p12.1	0.283	1
GPC5	11q-Del	0.283	1
GPC5	Amp_17q23.3	0.283	1
MLL2	PHLDA3	0.283	1
MLL2	RAD51C	0.283	1
MLL2	Amp_6q21	0.283	1
TPTE	11q-Del	0.283	1
TXNIP	Amp_8p11.23	0.283	1
11q-Del	Amp_9p24.1	0.283	1
Amp_8p11.23	Amp_9p24.1	0.283	1
Amp_8p11.23	Amp_12p12.1	0.283	1
EP300	8q-Amp	0.284	1
ERBB3	Amp_3q26.33	0.284	1
ERBB3	Amp_7p21.1	0.284	1
NFE2L2	Del_8p23.1	0.284	1
TSC1	Del_8p23.1	0.284	1
Amp_3q26.33	Del_16q23.1	0.284	1
ASXL2	Amp_12q15	0.285	1
CREBBP	Amp_16p13.2	0.285	1
FGFR3	Amp_16p13.2	0.285	1
RBM26	Del_4q34.2	0.285	1
RBM26	Del_19p13.3	0.285	1
5p-Amp	22q-Del	0.285	1
5p-Amp	Amp_16p13.2	0.285	1
22q-Del	Amp_12q15	0.285	1
Amp_16p13.2	Del_19p13.3	0.285	1
RBM26	Amp_3p25.2	0.286	1
CREBBP	Del_9p21.3	0.287	1
FBXW7	4p-Del	0.287	1
FBXW7	Del_14q24.1	0.287	1
4p-Del	Amp_17q12	0.287	1
4p-Del	Amp_22q12.2	0.287	1
Amp_8q22.3	Del_9p21.3	0.287	1
ELF3	20p-Amp	0.289	1
ELF3	Amp_19q13.43	0.289	1
NFE2L2	Amp_2p25.1	0.289	1
NFE2L2	Amp_19q13.43	0.289	1
NFE2L2	Del_6p25.3	0.289	1
TSC1	20p-Amp	0.289	1
TSC1	Amp_2p25.1	0.289	1
20p-Amp	3q-Amp	0.289	1
20p-Amp	Amp_4p16.3	0.289	1
3q-Amp	5q-Del	0.289	1
3q-Amp	Amp_2p25.1	0.289	1
3q-Amp	Del_22q13.32	0.289	1
7p-Amp	6q-Del	0.289	1
7p-Amp	Amp_19q13.43	0.289	1
7p-Amp	Del_6p25.3	0.289	1
6q-Del	Amp_4p16.3	0.289	1
Amp_2p25.1	Del_2q22.1	0.289	1
Amp_4p16.3	Amp_19q13.43	0.289	1
Amp_4p16.3	Del_6p25.3	0.289	1
Del_2q22.1	Del_22q13.32	0.289	1
Del_4q22.1	Del_6p25.3	0.289	1
CDKN1A	Amp_7p11.2	0.292	1
17q-Amp	17p-Del	0.292	1
Amp_7p11.2	Del_3p14.2	0.292	1
Amp_7p11.2	Del_6q27	0.292	1
Amp_17q23.3	Del_2q37.1	0.292	1
ARID1A	Del_18q23	0.294	1
FBXW7	Amp_7p11.2	0.294	1
FBXW7	Del_2q37.1	0.294	1
RXRA	Amp_7p11.2	0.294	1
Amp_3p25.2	Del_18q23	0.294	1
ACRC	Del_17p12	0.295	1
NFE2L2	Amp_20q11.21	0.296	1
PIK3CA	7p-Amp	0.296	1
PIK3CA	Del_2q22.1	0.296	1
TSC1	Amp_20q11.21	0.296	1
7p-Amp	Del_9q33.2	0.296	1
Amp_20q11.21	Del_4q22.1	0.296	1
CREBBP	11q-Del	0.297	1
CREBBP	Amp_17q23.3	0.297	1
ERBB3	KLF5	0.297	1
KLF5	8q-Amp	0.297	1
8q-Amp	4q-Del	0.297	1
8q-Amp	Amp_16p11.2	0.297	1
Amp_1p34.2	Del_16q23.1	0.297	1
SPTAN1	Amp_1q23.3	0.298	1
RB1	11p-Del	0.303	1
TP53	FAT1	0.303	1
9p-Del	Del_16p13.3	0.303	1
NFE2L2	Amp_8q22.3	0.304	1
PIK3CA	Amp_3p25.2	0.304	1
PIK3CA	Amp_5p15.33	0.304	1
RBM26	Del_9p21.3	0.304	1
10q-Del	Amp_8q22.3	0.304	1
Amp_8q22.3	Del_2q22.1	0.304	1
Amp_8q22.3	Del_4q22.1	0.304	1
KDM6A	RBM26	0.305	1
KDM6A	22q-Del	0.305	1
RBM26	Amp_1q21.3	0.305	1
ARID1A	ACRC	0.308	1
ARID1A	Amp_6q21	0.308	1
ARID1A	Del_1q32.1	0.308	1
FOXA1	Del_8p23.1	0.308	1
PHLDA3	Amp_5p15.33	0.308	1
ACRC	Amp_5p15.33	0.308	1
RAD51C	Amp_3p25.2	0.308	1
Amp_5p15.33	Amp_6q21	0.308	1
Amp_5p15.33	Del_Xq21.33	0.308	1
CDKN1A	KDM6A	0.309	1
Del_9p23	Del_10q23.31	0.309	1
ASXL2	FAT1	0.31	1
ASXL2	20q-Amp	0.31	1
FAT1	Amp_16p13.2	0.31	1
20q-Amp	Amp_6p22.3	0.31	1
18q-Del	Amp_6p22.3	0.31	1
18q-Del	Amp_16p13.2	0.31	1
22q-Del	Amp_13q22.1	0.31	1
22q-Del	Amp_17q11.2	0.31	1
Amp_13q22.1	Amp_16p13.2	0.31	1
BTG2	Del_18q23	0.311	1
HRAS	Amp_19q12	0.311	1
HRAS	Del_18q23	0.311	1
ZFP36L1	Del_18q23	0.311	1
Amp_4q13.3	Del_18q23	0.311	1
PIK3CA	1q-Amp	0.312	1
STAG2	Del_13q14.2	0.312	1
ECM1	Amp_20q11.21	0.312	1
17p-Del	Amp_7p21.1	0.313	1
ARID1A	20p-Amp	0.314	1
ARID1A	5q-Del	0.314	1
ARID1A	6q-Del	0.314	1
ARID1A	Del_6p25.3	0.314	1
Amp_5p15.33	Del_6p25.3	0.314	1
TP53	ACRC	0.315	1
TP53	19q-Amp	0.315	1
TP53	Del_Xq21.33	0.315	1
GPC5	MLL2	0.316	1
MLL2	TXNIP	0.316	1
MLL2	Amp_12p12.1	0.316	1
MLL2	Del_12p13.1	0.316	1
CREBBP	PIK3CA	0.318	1
CREBBP	Amp_20q11.21	0.318	1
CREBBP	Del_9q33.2	0.318	1
PIK3CA	5p-Amp	0.318	1
Del_8p23.1	Del_11q23.3	0.318	1
Del_9q33.2	Del_19p13.3	0.318	1
ELF3	11p-Del	0.32	1
ELF3	Amp_10p14	0.32	1
ELF3	Amp_22q12.2	0.32	1
FBXW7	TSC1	0.32	1
FBXW7	10q-Del	0.32	1
FBXW7	Amp_4p16.3	0.32	1
FBXW7	Del_2q22.1	0.32	1
FBXW7	Del_4q22.1	0.32	1
NFE2L2	RXRA	0.32	1
NFE2L2	Amp_17q12	0.32	1
NFE2L2	Del_14q24.1	0.32	1
RXRA	Amp_4p16.3	0.32	1
TSC1	7q-Amp	0.32	1
TSC1	4p-Del	0.32	1
TSC1	Amp_10p14	0.32	1
TSC1	Amp_22q12.2	0.32	1
3q-Amp	4p-Del	0.32	1
3q-Amp	8p-Del	0.32	1
3q-Amp	Del_14q24.1	0.32	1
7p-Amp	11p-Del	0.32	1
7p-Amp	9p-Del	0.32	1
7p-Amp	Amp_17q12	0.32	1
7q-Amp	Del_2q22.1	0.32	1
10q-Del	Amp_17q12	0.32	1
11q-Del	Amp_8q22.3	0.32	1
4p-Del	Amp_4p16.3	0.32	1
Amp_17q12	Del_4q22.1	0.32	1
KDM6A	Amp_6q23.3	0.321	1
PHLDA3	Amp_1q21.3	0.321	1
STAG2	Del_8p23.1	0.321	1
RAD51C	Amp_1q21.3	0.321	1
Amp_6q23.3	Del_9p23	0.321	1
11p-Del	Amp_8q22.3	0.322	1
9p-Del	Amp_8q22.3	0.322	1
Del_9p21.3	Del_13q14.2	0.323	1
KLF5	6q-Del	0.325	1
KLF5	Amp_19q13.43	0.325	1
20p-Amp	Amp_1p34.2	0.325	1
4q-Del	Del_6p25.3	0.325	1
5q-Del	Amp_1p34.2	0.325	1
6q-Del	Amp_1p34.2	0.325	1
Amp_1p34.2	Amp_2p25.1	0.325	1
Amp_1p34.2	Del_6p25.3	0.325	1
MLL2	Amp_17q12	0.327	1
MLL2	Amp_22q12.2	0.327	1
9q-Del	Amp_19q13.43	0.327	1
Amp_2p25.1	Amp_3q26.33	0.327	1
Amp_3q26.33	Del_22q13.32	0.327	1
Del_5q12.1	Del_6p25.3	0.327	1
Del_11q25	Del_22q13.32	0.327	1
CX3CL1	9p-Del	0.328	1
ECM1	11p-Del	0.328	1
ECM1	9p-Del	0.328	1
ECM1	Amp_10p14	0.328	1
11p-Del	Amp_16q22.1	0.328	1
ERCC2	MLL2	0.329	1
ERCC2	TPTE	0.329	1
ERCC2	TXNIP	0.329	1
ERCC2	Amp_12p12.1	0.329	1
FGFR3	Amp_9p24.1	0.329	1
FGFR3	Amp_12p12.1	0.329	1
GPC5	5p-Amp	0.329	1
TPTE	5p-Amp	0.329	1
TPTE	Amp_12q15	0.329	1
5p-Amp	Del_12p13.1	0.329	1
Amp_9p24.1	Amp_12q15	0.329	1
Amp_9p24.1	Del_4q34.2	0.329	1
Amp_12p12.1	Del_19p13.3	0.329	1
Del_8p23.1	Del_Xp11.3	0.329	1
BTG2	Amp_7p21.1	0.33	1
CREBBP	Amp_11q13.3	0.33	1
EP300	ZFP36L1	0.33	1
EP300	Amp_11q22.2	0.33	1
EP300	Del_9q33.2	0.33	1
FGFR3	MLL	0.33	1
HRAS	9q-Del	0.33	1
HRAS	Del_5q12.1	0.33	1
HRAS	Del_11q25	0.33	1
PIK3CA	9q-Del	0.33	1
PIK3CA	Del_5q12.1	0.33	1
RB1	Del_4q34.2	0.33	1
ZFP36L1	9q-Del	0.33	1
ZFP36L1	Amp_7p21.1	0.33	1
ZFP36L1	Del_5q12.1	0.33	1
5p-Amp	Del_16p13.3	0.33	1
9q-Del	Amp_11q22.2	0.33	1
Amp_3q26.33	Amp_4q13.3	0.33	1
Amp_4q13.3	Del_11q23.3	0.33	1
Amp_4q13.3	Del_11q25	0.33	1
Amp_11q22.2	Del_5q12.1	0.33	1
Amp_11q22.2	Del_11q23.3	0.33	1
Amp_11q22.2	Del_11q25	0.33	1
ELF3	Del_9p21.3	0.332	1
CDKN1A	RHOB	0.333	1
CDKN1A	17q-Amp	0.333	1
CDKN1A	Del_1p36.11	0.333	1
FOXQ1	11q-Del	0.333	1
FOXQ1	Amp_8p11.23	0.333	1
FOXQ1	Del_10q23.31	0.333	1
MIPOL1	11q-Del	0.333	1
MIPOL1	Del_6q27	0.333	1
MIPOL1	Del_10q23.31	0.333	1
RHOB	Amp_8p11.23	0.333	1
17q-Amp	Amp_8p11.23	0.333	1
3p-Amp	Del_3p14.2	0.333	1
3p-Amp	Del_6q27	0.333	1
3p-Amp	Del_10q23.31	0.333	1
CDKN1A	FAT1	0.334	1
CDKN1A	20q-Amp	0.334	1
CDKN1A	Amp_17q11.2	0.334	1
FAT1	Del_6q27	0.334	1
11q-Del	Amp_13q22.1	0.334	1
18q-Del	Amp_17q23.3	0.334	1
Amp_13q22.1	Amp_17q23.3	0.334	1
Amp_13q22.1	Del_6q27	0.334	1
PHLDA3	Del_11p15.5	0.335	1
4q-Del	Amp_1q23.3	0.335	1
ASXL2	ERBB3	0.337	1
ASXL2	STAG2	0.337	1
RBM26	8q-Amp	0.337	1
RBM26	Del_16q23.1	0.337	1
KDM6A	Del_22q13.32	0.339	1
20p-Amp	Del_9p23	0.339	1
Amp_19q13.43	Del_9p23	0.339	1
Del_9p23	Del_22q13.32	0.339	1
PIK3CA	Del_9p23	0.341	1
19p-Del	Amp_8q22.3	0.341	1
ARID1A	9q-Del	0.342	1
9q-Del	Amp_3p25.2	0.342	1
Amp_3q26.33	Amp_5p15.33	0.342	1
Amp_5p15.33	Del_11q23.3	0.342	1
CX3CL1	Amp_7p11.2	0.344	1
ELF3	Amp_7p11.2	0.344	1
NFE2L2	Amp_7p11.2	0.344	1
TSC1	Amp_7p11.2	0.344	1
TSC1	Del_2q37.1	0.344	1
ECM1	Amp_7p11.2	0.344	1
ECM1	Del_2q37.1	0.344	1
3q-Amp	Amp_7p11.2	0.344	1
10q-Del	Amp_7p11.2	0.344	1
Amp_1q23.3	Del_13q14.2	0.345	1
ERBB3	Amp_8q22.3	0.346	1
FBXW7	Del_18q23	0.346	1
RXRA	Amp_19q12	0.346	1
STAG2	Amp_8q22.3	0.346	1
7q-Amp	Amp_19q12	0.346	1
CREBBP	9p-Del	0.348	1
ERCC2	8p-Del	0.348	1
ERCC2	9p-Del	0.348	1
Amp_10p14	Amp_12q15	0.348	1
ARID1A	11p-Del	0.349	1
EP300	Amp_8q22.3	0.349	1
11p-Del	Amp_5p15.33	0.349	1
9p-Del	Amp_3p25.2	0.349	1
Amp_8q22.3	Del_11q23.3	0.349	1
Amp_8q22.3	Del_11q25	0.349	1
HRAS	Del_13q14.2	0.35	1
ZFP36L1	17p-Del	0.35	1
7q-Amp	Del_17p12	0.35	1
17p-Del	Amp_4q13.3	0.35	1
17p-Del	Amp_11q22.2	0.35	1
Amp_11q22.2	Del_13q14.2	0.35	1
KLF5	Del_9q33.2	0.352	1
PIK3CA	4q-Del	0.352	1
PIK3CA	Amp_16p11.2	0.352	1
ACRC	Del_9p21.3	0.352	1
Amp_1p34.2	Amp_20q11.21	0.352	1
Amp_1p34.2	Del_9q33.2	0.352	1
ELF3	Amp_4p16.3	0.353	1
ELF3	Del_2q22.1	0.353	1
ELF3	Del_15q13.1	0.353	1
NFE2L2	Amp_4p16.3	0.353	1
NFE2L2	Del_2q22.1	0.353	1
TSC1	7p-Amp	0.353	1
TSC1	10q-Del	0.353	1
TSC1	Del_4q22.1	0.353	1
3q-Amp	7p-Amp	0.353	1
7p-Amp	Del_2q22.1	0.353	1
10q-Del	Amp_4p16.3	0.353	1
Amp_4p16.3	Del_4q22.1	0.353	1
Amp_4p16.3	Del_15q13.1	0.353	1
Del_2q22.1	Del_4q22.1	0.353	1
Del_2q22.1	Del_15q13.1	0.353	1
ARID1A	TXNIP	0.355	1
ARID1A	Del_12p13.1	0.355	1
GPC5	Amp_3p25.2	0.355	1
TPTE	Amp_13q22.1	0.355	1
FAT1	Amp_9p24.1	0.355	1
FAT1	Amp_12p12.1	0.355	1
20q-Amp	Amp_12p12.1	0.355	1
18q-Del	Amp_9p24.1	0.355	1
Amp_9p24.1	Amp_13q22.1	0.355	1
Amp_13q22.1	Del_12p13.1	0.355	1
Amp_19q13.43	Del_9p21.3	0.355	1
CDKN2A	Del_16p13.3	0.356	1
FBXW7	4q-Del	0.356	1
FBXW7	Amp_1p34.2	0.356	1
FBXW7	Amp_16p11.2	0.356	1
KLF5	RXRA	0.356	1
KLF5	Del_14q24.1	0.356	1
MIPOL1	RB1	0.356	1
MIPOL1	Amp_11q13.3	0.356	1
MIPOL1	Del_16p13.3	0.356	1
RB1	17q-Amp	0.356	1
RB1	Del_1p36.11	0.356	1
RHOB	Del_16p13.3	0.356	1
RXRA	Amp_16p11.2	0.356	1
MLL	15q-Del	0.356	1
MLL	Del_1p36.11	0.356	1
17q-Amp	Amp_11q13.3	0.356	1
7q-Amp	Amp_1p34.2	0.356	1
7q-Amp	Amp_16p11.2	0.356	1
14q-Del	Amp_11q13.3	0.356	1
14q-Del	Del_16p13.3	0.356	1
17p-Del	Del_22q13.32	0.356	1
4p-Del	Amp_1p34.2	0.356	1
4q-Del	Amp_17q12	0.356	1
4q-Del	Amp_22q12.2	0.356	1
5p-Amp	Del_17p12	0.357	1
11q-Del	Amp_19q12	0.357	1
Amp_8p11.23	Del_18q23	0.357	1
Amp_5p15.33	Del_17p12	0.358	1
RB1	Amp_1q21.3	0.36	1
ASXL2	20p-Amp	0.366	1
CREBBP	Amp_12q15	0.366	1
EP300	9p-Del	0.366	1
ERCC2	FGFR3	0.366	1
FGFR3	5p-Amp	0.366	1
RBM26	5q-Del	0.366	1
RBM26	6q-Del	0.366	1
RBM26	Amp_19q13.43	0.366	1
RBM26	Del_6p25.3	0.366	1
8p-Del	Del_11q23.3	0.366	1
Amp_10p14	Del_5q12.1	0.366	1
Amp_10p14	Del_11q25	0.366	1
PIK3CA	Amp_17q11.2	0.367	1
Amp_13q22.1	Del_9q33.2	0.367	1
RB1	Amp_13q22.1	0.368	1
RB1	Amp_17q11.2	0.368	1
TP53	Amp_12p12.1	0.368	1
MLL	20q-Amp	0.368	1
MLL	18q-Del	0.368	1
20q-Amp	Del_2q34	0.368	1
18q-Del	Amp_11q13.3	0.368	1
18q-Del	Del_16p13.3	0.368	1
Amp_6p22.3	Amp_16p13.2	0.368	1
Amp_11q13.3	Amp_17q11.2	0.368	1
Amp_8q22.3	Del_9p23	0.369	1
EP300	7q-Amp	0.374	1
FBXW7	Amp_3q26.33	0.374	1
FBXW7	Del_11q25	0.374	1
RXRA	Amp_3q26.33	0.374	1
RXRA	Amp_7p21.1	0.374	1
7q-Amp	Del_11q23.3	0.374	1
7q-Amp	Del_11q25	0.374	1
4p-Del	Del_11q23.3	0.374	1
4p-Del	Del_11q25	0.374	1
Amp_3q26.33	Amp_22q12.2	0.374	1
Amp_17q12	Del_5q12.1	0.374	1
ARID1A	Amp_22q12.2	0.375	1
ARID1A	Del_14q24.1	0.375	1
CDKN1A	STAG2	0.375	1
CDKN1A	8q-Amp	0.375	1
EP300	Del_9p23	0.375	1
ERBB3	11q-Del	0.375	1
ERBB3	Del_10q23.31	0.375	1
KDM6A	TPTE	0.375	1
KDM6A	Del_5q12.1	0.375	1
PIK3CA	Del_13q14.2	0.375	1
SPTAN1	Amp_17q23.3	0.375	1
TPTE	Del_9p23	0.375	1
TXNIP	Amp_1q21.3	0.375	1
TXNIP	Del_9p23	0.375	1
11q-Del	Del_16q23.1	0.375	1
KLF5	9p-Del	0.376	1
KLF5	Amp_10p14	0.376	1
11p-Del	Amp_16p11.2	0.376	1
8p-Del	Amp_1p34.2	0.376	1
Amp_1p34.2	Amp_10p14	0.376	1
PIK3CA	11p-Del	0.378	1
CDKN2A	CREBBP	0.38	1
CDKN2A	Amp_12q15	0.38	1
CREBBP	Del_1p36.11	0.38	1
CREBBP	Del_2q37.1	0.38	1
CX3CL1	Amp_19q12	0.38	1
ERCC2	FOXQ1	0.38	1
ERCC2	Del_1p36.11	0.38	1
FGFR3	FOXQ1	0.38	1
FGFR3	17q-Amp	0.38	1
FGFR3	3p-Amp	0.38	1
FOXA1	5p-Amp	0.38	1
FOXQ1	5p-Amp	0.38	1
FOXQ1	Amp_12q15	0.38	1
FOXQ1	Del_19p13.3	0.38	1
MIPOL1	5p-Amp	0.38	1
MIPOL1	Del_4q34.2	0.38	1
RHOB	Amp_12q15	0.38	1
ECM1	Amp_19q12	0.38	1
1q-Amp	Amp_19q12	0.38	1
1q-Amp	Del_18q23	0.38	1
3p-Amp	Del_4q34.2	0.38	1
5p-Amp	15q-Del	0.38	1
5p-Amp	Del_1p36.11	0.38	1
14q-Del	Amp_12q15	0.38	1
Amp_7p11.2	Amp_12q15	0.38	1
Amp_12q15	Del_2q37.1	0.38	1
Del_1p36.11	Del_4q34.2	0.38	1
Del_1p36.11	Del_19p13.3	0.38	1
GPC5	STAG2	0.382	1
GPC5	Del_16q23.1	0.382	1
SPTAN1	Amp_9p24.1	0.382	1
SPTAN1	Amp_12p12.1	0.382	1
SPTAN1	Del_12p13.1	0.382	1
STAG2	TPTE	0.382	1
STAG2	TXNIP	0.382	1
STAG2	Amp_9p24.1	0.382	1
HRAS	Amp_1q23.3	0.384	1
ZFP36L1	Amp_1q23.3	0.384	1
CREBBP	Amp_3p25.2	0.386	1
CREBBP	Amp_5p15.33	0.386	1
ERCC2	Amp_5p15.33	0.386	1
Amp_5p15.33	Amp_12q15	0.386	1
KDM6A	8p-Del	0.387	1
MLL2	Amp_17q11.2	0.388	1
MLL2	Del_Xp11.3	0.389	1
ELF3	KLF5	0.39	1
ELF3	Amp_16p11.2	0.39	1
KLF5	10q-Del	0.39	1
KLF5	Amp_4p16.3	0.39	1
KLF5	Del_4q22.1	0.39	1
KLF5	Del_15q13.1	0.39	1
NFE2L2	Amp_1p34.2	0.39	1
NFE2L2	Amp_16p11.2	0.39	1
TSC1	4q-Del	0.39	1
TSC1	Amp_16p11.2	0.39	1
3q-Amp	4q-Del	0.39	1
3q-Amp	Amp_16p11.2	0.39	1
7p-Amp	Amp_1p34.2	0.39	1
7p-Amp	Amp_16p11.2	0.39	1
10q-Del	Amp_1p34.2	0.39	1
4q-Del	Amp_4p16.3	0.39	1
4q-Del	Del_2q22.1	0.39	1
Amp_1p34.2	Del_2q22.1	0.39	1
Amp_4p16.3	Amp_16p11.2	0.39	1
Amp_16p11.2	Del_4q22.1	0.39	1
MLL	Del_11p15.5	0.391	1
BTG2	Amp_17q23.3	0.392	1
CDKN1A	ZFP36L1	0.392	1
CDKN1A	Amp_4q13.3	0.392	1
HRAS	11q-Del	0.392	1
HRAS	Amp_17q23.3	0.392	1
HRAS	Del_6q27	0.392	1
HRAS	Del_10q23.31	0.392	1
ZFP36L1	Amp_8p11.23	0.392	1
ZFP36L1	Del_10q23.31	0.392	1
11q-Del	Amp_4q13.3	0.392	1
11q-Del	Amp_11q22.2	0.392	1
Amp_4q13.3	Del_3p14.2	0.392	1
Amp_4q13.3	Del_6q27	0.392	1
Amp_8p11.23	Amp_11q22.2	0.392	1
Amp_11q22.2	Amp_17q23.3	0.392	1
Amp_11q22.2	Del_3p14.2	0.392	1
Amp_11q22.2	Del_6q27	0.392	1
Amp_11q22.2	Del_10q23.31	0.392	1
Del_9p21.3	Del_16p13.3	0.392	1
ELF3	MLL2	0.393	1
FBXW7	TP53	0.393	1
MLL2	3q-Amp	0.393	1
MLL2	Amp_4p16.3	0.393	1
MLL2	Del_2q22.1	0.393	1
TP53	Amp_22q12.2	0.393	1
TP53	Del_14q24.1	0.393	1
17p-Del	Amp_5p15.33	0.393	1
Amp_5p15.33	Del_13q14.2	0.393	1
Amp_7p21.1	Del_3p14.2	0.393	1
Amp_17q23.3	Del_11q23.3	0.393	1
Amp_11q22.2	Del_9p21.3	0.394	1
PHLDA3	Del_9q33.2	0.395	1
PIK3CA	Amp_6q21	0.395	1
PIK3CA	Amp_6q23.3	0.395	1
PIK3CA	Del_Xq21.33	0.395	1
RAD51C	Amp_20q11.21	0.395	1
RAD51C	Del_9q33.2	0.395	1
19q-Amp	Del_9q33.2	0.395	1
Amp_6q21	Amp_20q11.21	0.395	1
Amp_6q21	Del_9q33.2	0.395	1
Amp_6q23.3	Amp_20q11.21	0.395	1
MLL2	17q-Amp	0.396	1
MLL2	3p-Amp	0.396	1
MLL2	14q-Del	0.396	1
ELF3	Del_18q23	0.397	1
FBXW7	22q-Del	0.397	1
RXRA	Amp_16p13.2	0.397	1
RBM26	Amp_22q12.2	0.397	1
RBM26	Del_14q24.1	0.397	1
3q-Amp	Amp_19q12	0.397	1
7p-Amp	Amp_19q12	0.397	1
22q-Del	Amp_17q12	0.397	1
22q-Del	Amp_22q12.2	0.397	1
Amp_4p16.3	Amp_19q12	0.397	1
Amp_4p16.3	Del_18q23	0.397	1
ARID1A	Del_2q37.1	0.398	1
FAT1	11p-Del	0.398	1
FAT1	9p-Del	0.398	1
20q-Amp	Amp_10p14	0.398	1
11p-Del	Amp_17q11.2	0.398	1
9p-Del	Amp_13q22.1	0.398	1
Amp_5p15.33	Del_2q37.1	0.398	1
CX3CL1	EP300	0.399	1
CX3CL1	9q-Del	0.399	1
CX3CL1	Amp_3q26.33	0.399	1
CX3CL1	Del_11q25	0.399	1
EP300	1q-Amp	0.399	1
CEP192	Amp_3q26.33	0.399	1
CEP192	Del_11q23.3	0.399	1
ECM1	Amp_3q26.33	0.399	1
ECM1	Amp_7p21.1	0.399	1
ECM1	Del_5q12.1	0.399	1
ECM1	Del_11q23.3	0.399	1
ECM1	Del_11q25	0.399	1
1q-Amp	Amp_7p21.1	0.399	1
Amp_7p21.1	Amp_16q22.1	0.399	1
Amp_16q22.1	Del_11q23.3	0.399	1
Amp_16q22.1	Del_11q25	0.399	1
FBXW7	Amp_1q21.3	0.4	1
FBXW7	Del_9p23	0.4	1
HRAS	Del_8p23.1	0.4	1
RXRA	Amp_1q21.3	0.4	1
7q-Amp	Amp_1q21.3	0.4	1
4p-Del	Amp_1q21.3	0.4	1
Amp_17q12	Del_9p23	0.4	1
KLF5	Amp_7p11.2	0.401	1
RB1	Amp_19q12	0.401	1
STAG2	TP53	0.401	1
TP53	8q-Amp	0.401	1
Amp_5p15.33	Del_9p21.3	0.401	1
Amp_11q13.3	Amp_19q12	0.401	1
Del_16p13.3	Del_18q23	0.401	1
FBXW7	Del_13q14.2	0.403	1
RXRA	Del_13q14.2	0.403	1
7q-Amp	17p-Del	0.403	1
17p-Del	Amp_17q12	0.403	1
Amp_6p22.3	Del_10q23.31	0.403	1
Amp_7p11.2	Del_11q25	0.404	1
CDKN2A	Amp_13q22.1	0.405	1
CREBBP	20q-Amp	0.405	1
CREBBP	18q-Del	0.405	1
CREBBP	Amp_13q22.1	0.405	1
CREBBP	Amp_17q11.2	0.405	1
ERCC2	20q-Amp	0.405	1
ERCC2	18q-Del	0.405	1
ERCC2	Amp_13q22.1	0.405	1
FGFR3	Amp_13q22.1	0.405	1
FOXA1	20q-Amp	0.405	1
FOXA1	18q-Del	0.405	1
FOXQ1	18q-Del	0.405	1
MIPOL1	18q-Del	0.405	1
MIPOL1	Amp_13q22.1	0.405	1
RHOB	FAT1	0.405	1
RHOB	Amp_17q11.2	0.405	1
FAT1	3p-Amp	0.405	1
FAT1	14q-Del	0.405	1
17q-Amp	18q-Del	0.405	1
20q-Amp	3p-Amp	0.405	1
5p-Amp	Amp_17q11.2	0.405	1
14q-Del	Amp_13q22.1	0.405	1
15q-Del	Amp_13q22.1	0.405	1
Amp_17q11.2	Del_1p36.11	0.405	1
MLL2	Del_11p15.5	0.408	1
ERBB3	MLL	0.41	1
RB1	STAG2	0.41	1
RB1	8q-Amp	0.41	1
STAG2	MLL	0.41	1
EP300	Del_11p15.5	0.411	1
PHLDA3	11p-Del	0.411	1
PHLDA3	8p-Del	0.411	1
PHLDA3	9p-Del	0.411	1
TXNIP	20p-Amp	0.411	1
TXNIP	5q-Del	0.411	1
TXNIP	Amp_2p25.1	0.411	1
TXNIP	Del_22q13.32	0.411	1
ACRC	Amp_10p14	0.411	1
19q-Amp	8p-Del	0.411	1
20p-Amp	Amp_12p12.1	0.411	1
11p-Del	Amp_6q21	0.411	1
17p-Del	Amp_10p14	0.411	1
5q-Del	Del_12p13.1	0.411	1
8p-Del	Amp_6q21	0.411	1
8p-Del	Del_1q32.1	0.411	1
9p-Del	Amp_6q21	0.411	1
9p-Del	Amp_6q23.3	0.411	1
Amp_6q21	Amp_10p14	0.411	1
Amp_7p21.1	Del_11p15.5	0.411	1
Amp_12p12.1	Del_6p25.3	0.411	1
ASXL2	PIK3CA	0.414	1
ASXL2	Amp_20q11.21	0.414	1
BTG2	RB1	0.414	1
HRAS	RB1	0.414	1
HRAS	Amp_11q13.3	0.414	1
HRAS	Del_2q34	0.414	1
HRAS	Del_16p13.3	0.414	1
PIK3CA	Amp_16p13.2	0.414	1
RB1	Amp_4q13.3	0.414	1
ZFP36L1	Del_16p13.3	0.414	1
MLL	Amp_11q22.2	0.414	1
RBM26	Amp_20q11.21	0.414	1
Amp_4q13.3	Amp_11q13.3	0.414	1
Amp_4q13.3	Del_2q34	0.414	1
Amp_11q22.2	Del_16p13.3	0.414	1
ARID1A	19p-Del	0.415	1
3p-Amp	Del_17p12	0.415	1
19p-Del	Amp_3p25.2	0.415	1
19p-Del	Amp_5p15.33	0.415	1
Del_1p36.11	Del_17p12	0.415	1
ERCC2	Del_9p23	0.416	1
KDM6A	Del_4q34.2	0.416	1
PIK3CA	Del_8p23.1	0.416	1
5p-Amp	Amp_1q21.3	0.416	1
5p-Amp	Del_9p23	0.416	1
Amp_1q21.3	Amp_12q15	0.416	1
Amp_12q15	Del_8p23.1	0.416	1
Del_8p23.1	Del_9q33.2	0.416	1
Amp_13q22.1	Del_17p12	0.417	1
MLL2	Amp_20q11.21	0.418	1
NFE2L2	Del_17p12	0.418	1
ECM1	17p-Del	0.418	1
1q-Amp	17p-Del	0.418	1
17p-Del	Amp_16q22.1	0.418	1
Amp_16q22.1	Del_13q14.2	0.418	1
CDKN1A	20p-Amp	0.419	1
CDKN1A	Amp_19q13.43	0.419	1
CDKN1A	Del_6p25.3	0.419	1
11q-Del	5q-Del	0.419	1
11q-Del	Del_22q13.32	0.419	1
6q-Del	Amp_8p11.23	0.419	1
Amp_8p11.23	Amp_19q13.43	0.419	1
11p-Del	8p-Del	0.42	1
Del_9q33.2	Del_16q23.1	0.42	1
PIK3CA	Del_2q37.1	0.422	1
TPTE	Del_9p21.3	0.422	1
ELF3	Amp_3q26.33	0.426	1
ELF3	Amp_7p21.1	0.426	1
ELF3	Del_5q12.1	0.426	1
ELF3	Del_11q23.3	0.426	1
ELF3	Del_11q25	0.426	1
EP300	NFE2L2	0.426	1
EP300	7p-Amp	0.426	1
NFE2L2	Amp_7p21.1	0.426	1
TSC1	Del_11q23.3	0.426	1
TSC1	Del_11q25	0.426	1
3q-Amp	Amp_7p21.1	0.426	1
7p-Amp	9q-Del	0.426	1
7p-Amp	Amp_3q26.33	0.426	1
7p-Amp	Del_5q12.1	0.426	1
Amp_4p16.3	Amp_7p21.1	0.426	1
Amp_17q12	Del_11p15.5	0.426	1
KLF5	4q-Del	0.427	1
KLF5	Amp_1p34.2	0.427	1
KLF5	Amp_16p11.2	0.427	1
4q-Del	Amp_1p34.2	0.427	1
Amp_1p34.2	Amp_16p11.2	0.427	1
PHLDA3	Del_2q37.1	0.428	1
Amp_6q21	Del_2q37.1	0.428	1
Amp_7p11.2	Del_1q32.1	0.428	1
Del_9p23	Del_13q14.2	0.428	1
KDM6A	Del_Xp11.3	0.429	1
MLL2	Amp_19q12	0.429	1
ELF3	RBM26	0.43	1
NFE2L2	RBM26	0.43	1
NFE2L2	Amp_16p13.2	0.43	1
TSC1	RBM26	0.43	1
TSC1	Amp_16p13.2	0.43	1
RBM26	3q-Amp	0.43	1
RBM26	Del_15q13.1	0.43	1
3q-Amp	22q-Del	0.43	1
3q-Amp	Amp_16p13.2	0.43	1
7p-Amp	Amp_16p13.2	0.43	1
18q-Del	Amp_7p11.2	0.43	1
Amp_4p16.3	Amp_16p13.2	0.43	1
Amp_16p13.2	Del_4q22.1	0.43	1
17p-Del	Amp_8p11.23	0.431	1
Amp_8p11.23	Del_13q14.2	0.431	1
CDKN2A	STAG2	0.432	1
CDKN2A	Del_16q23.1	0.432	1
ERBB3	MIPOL1	0.432	1
ERBB3	3p-Amp	0.432	1
ERBB3	Del_1p36.11	0.432	1
FOXA1	SPTAN1	0.432	1
FOXQ1	SPTAN1	0.432	1
FOXQ1	STAG2	0.432	1
FOXQ1	8q-Amp	0.432	1
FOXQ1	Del_16q23.1	0.432	1
MIPOL1	SPTAN1	0.432	1
RHOB	SPTAN1	0.432	1
RHOB	8q-Amp	0.432	1
RHOB	Del_16q23.1	0.432	1
SPTAN1	17q-Amp	0.432	1
SPTAN1	3p-Amp	0.432	1
SPTAN1	Del_1p36.11	0.432	1
STAG2	17q-Amp	0.432	1
STAG2	3p-Amp	0.432	1
STAG2	Del_1p36.11	0.432	1
3p-Amp	Del_16q23.1	0.432	1
ARID1A	MIPOL1	0.435	1
ARID1A	17q-Amp	0.435	1
CDKN2A	Amp_3p25.2	0.435	1
RHOB	Amp_5p15.33	0.435	1
3p-Amp	Amp_5p15.33	0.435	1
Amp_5p15.33	Del_1p36.11	0.435	1
KDM6A	Amp_7p11.2	0.436	1
EP300	MLL	0.437	1
EP300	Del_2q34	0.437	1
RB1	Amp_3q26.33	0.437	1
RB1	Del_11q25	0.437	1
9q-Del	Amp_11q13.3	0.437	1
BTG2	CREBBP	0.438	1
BTG2	FGFR3	0.438	1
BTG2	5p-Amp	0.438	1
BTG2	Amp_12q15	0.438	1
CREBBP	HRAS	0.438	1
CREBBP	Amp_4q13.3	0.438	1
FGFR3	HRAS	0.438	1
FGFR3	ZFP36L1	0.438	1
FGFR3	Amp_4q13.3	0.438	1
FGFR3	Amp_11q22.2	0.438	1
HRAS	5p-Amp	0.438	1
HRAS	Del_4q34.2	0.438	1
HRAS	Del_19p13.3	0.438	1
ZFP36L1	5p-Amp	0.438	1
ZFP36L1	Amp_12q15	0.438	1
ZFP36L1	Del_4q34.2	0.438	1
ZFP36L1	Del_19p13.3	0.438	1
5p-Amp	Amp_4q13.3	0.438	1
Amp_11q22.2	Amp_12q15	0.438	1
Amp_11q22.2	Del_4q34.2	0.438	1
Amp_11q22.2	Del_19p13.3	0.438	1
TXNIP	Amp_6p22.3	0.439	1
RBM26	8p-Del	0.439	1
11p-Del	Amp_16p13.2	0.439	1
9p-Del	Amp_16p13.2	0.439	1
Amp_6p22.3	Del_12p13.1	0.439	1
MLL2	Amp_8p11.23	0.44	1
Amp_1q23.3	Del_9p21.3	0.44	1
FBXW7	Amp_1q23.3	0.441	1
GPC5	4p-Del	0.441	1
GPC5	Amp_17q12	0.441	1
GPC5	Amp_22q12.2	0.441	1
TXNIP	7q-Amp	0.441	1
TXNIP	Amp_22q12.2	0.441	1
7q-Amp	Amp_1q23.3	0.441	1
4p-Del	Amp_9p24.1	0.441	1
Amp_17q12	Del_12p13.1	0.441	1
Amp_22q12.2	Del_12p13.1	0.441	1
ARID1A	NFE2L2	0.442	1
ARID1A	Del_4q22.1	0.442	1
ELF3	Amp_3p25.2	0.442	1
ELF3	Amp_5p15.33	0.442	1
Amp_3p25.2	Del_4q22.1	0.442	1
FAT1	18q-Del	0.443	1
KLF5	Del_9p21.3	0.444	1
ARID1A	18q-Del	0.446	1
CREBBP	SPTAN1	0.446	1
CREBBP	STAG2	0.446	1
CREBBP	8q-Amp	0.446	1
ERCC2	SPTAN1	0.446	1
ERCC2	STAG2	0.446	1
FGFR3	Del_16q23.1	0.446	1
SPTAN1	5p-Amp	0.446	1
SPTAN1	Amp_12q15	0.446	1
20q-Amp	Amp_3p25.2	0.446	1
20q-Amp	Amp_5p15.33	0.446	1
8q-Amp	Del_19p13.3	0.446	1
18q-Del	Amp_3p25.2	0.446	1
Amp_3p25.2	Amp_13q22.1	0.446	1
Amp_10p14	Del_9p21.3	0.446	1
ERCC2	Del_11p15.5	0.447	1
CREBBP	Amp_19q12	0.448	1
ERCC2	Del_18q23	0.448	1
FGFR3	Amp_19q12	0.448	1
ARID1A	KDM6A	0.449	1
ARID1A	Amp_1q21.3	0.449	1
Amp_5p15.33	Del_9p23	0.449	1
ERBB3	Amp_10p14	0.451	1
SPTAN1	8p-Del	0.451	1
STAG2	Amp_10p14	0.451	1
8q-Amp	8p-Del	0.451	1
MLL2	SPTAN1	0.453	1
MLL2	8q-Amp	0.453	1
RB1	5q-Del	0.454	1
RB1	Amp_19q13.43	0.454	1
MLL	20p-Amp	0.454	1
MLL	5q-Del	0.454	1
MLL	Amp_19q13.43	0.454	1
20p-Amp	Del_2q34	0.454	1
Amp_2p25.1	Amp_11q13.3	0.454	1
Amp_16p11.2	Del_18q23	0.454	1
ELF3	17p-Del	0.455	1
FOXQ1	Del_9p23	0.455	1
KDM6A	RHOB	0.455	1
RHOB	Del_9p23	0.455	1
3q-Amp	Del_13q14.2	0.455	1
7p-Amp	17p-Del	0.455	1
7p-Amp	Del_13q14.2	0.455	1
Del_2q22.1	Del_13q14.2	0.455	1
18q-Del	Amp_1q23.3	0.459	1
CDKN1A	1q-Amp	0.46	1
CDKN1A	Amp_16q22.1	0.46	1
CX3CL1	11q-Del	0.46	1
CX3CL1	Amp_8p11.23	0.46	1
CX3CL1	Amp_17q23.3	0.46	1
CX3CL1	Del_3p14.2	0.46	1
FOXA1	20p-Amp	0.46	1
FOXQ1	5q-Del	0.46	1
FOXQ1	Amp_2p25.1	0.46	1
FOXQ1	Del_22q13.32	0.46	1
MIPOL1	6q-Del	0.46	1
RHOB	Amp_19q13.43	0.46	1
CEP192	11q-Del	0.46	1
ECM1	11q-Del	0.46	1
ECM1	Del_3p14.2	0.46	1
ECM1	Del_6q27	0.46	1
ECM1	Del_10q23.31	0.46	1
1q-Amp	Del_10q23.31	0.46	1
20p-Amp	3p-Amp	0.46	1
20p-Amp	14q-Del	0.46	1
3p-Amp	5q-Del	0.46	1
3p-Amp	6q-Del	0.46	1
3p-Amp	Del_22q13.32	0.46	1
11q-Del	Amp_16q22.1	0.46	1
6q-Del	Del_1p36.11	0.46	1
RBM26	Amp_8q22.3	0.461	1
Amp_22q12.2	Del_9p21.3	0.461	1
BTG2	FAT1	0.463	1
BTG2	18q-Del	0.463	1
BTG2	Amp_13q22.1	0.463	1
HRAS	20q-Amp	0.463	1
HRAS	18q-Del	0.463	1
HRAS	Amp_13q22.1	0.463	1
PHLDA3	Amp_19q12	0.463	1
PHLDA3	Del_18q23	0.463	1
ZFP36L1	20q-Amp	0.463	1
ZFP36L1	18q-Del	0.463	1
ZFP36L1	Amp_13q22.1	0.463	1
ACRC	Del_18q23	0.463	1
FAT1	Amp_11q22.2	0.463	1
20q-Amp	Amp_11q22.2	0.463	1
18q-Del	Amp_4q13.3	0.463	1
Amp_6q21	Del_18q23	0.463	1
Amp_11q22.2	Amp_13q22.1	0.463	1
Amp_11q22.2	Amp_17q11.2	0.463	1
Del_1q32.1	Del_18q23	0.463	1
RBM26	Amp_7p11.2	0.464	1
RBM26	Del_2q37.1	0.464	1
KLF5	22q-Del	0.466	1
KLF5	Amp_16p13.2	0.466	1
RBM26	4q-Del	0.466	1
RBM26	Amp_16p11.2	0.466	1
22q-Del	Amp_1p34.2	0.466	1
4q-Del	Amp_16p13.2	0.466	1
Amp_1p34.2	Amp_16p13.2	0.466	1
CDKN1A	RXRA	0.467	1
CDKN1A	7q-Amp	0.467	1
FBXW7	11q-Del	0.467	1
FBXW7	Amp_8p11.23	0.467	1
FBXW7	Del_3p14.2	0.467	1
FBXW7	Del_6q27	0.467	1
7q-Amp	Amp_8p11.23	0.467	1
7q-Amp	Del_6q27	0.467	1
11q-Del	4p-Del	0.467	1
4p-Del	Amp_8p11.23	0.467	1
4p-Del	Amp_17q23.3	0.467	1
Amp_8p11.23	Amp_17q12	0.467	1
Amp_8p11.23	Amp_22q12.2	0.467	1
Amp_8p11.23	Del_14q24.1	0.467	1
Amp_17q12	Del_10q23.31	0.467	1
Amp_22q12.2	Del_3p14.2	0.467	1
ELF3	Del_9p23	0.468	1
KDM6A	Amp_4p16.3	0.468	1
KDM6A	Del_2q22.1	0.468	1
KDM6A	Del_4q22.1	0.468	1
7p-Amp	Del_9p23	0.468	1
10q-Del	Del_9p23	0.468	1
Amp_1q23.3	Del_7q36.3	0.468	1
Del_4q22.1	Del_9p23	0.468	1
Del_9p23	Del_15q13.1	0.468	1
19p-Del	Amp_6p22.3	0.47	1
CDKN1A	PIK3CA	0.472	1
PIK3CA	11q-Del	0.472	1
PIK3CA	Amp_8p11.23	0.472	1
PIK3CA	Del_10q23.31	0.472	1
CDKN1A	Del_17p12	0.473	1
Amp_8p11.23	Del_17p12	0.473	1
ELF3	GPC5	0.474	1
ELF3	Amp_9p24.1	0.474	1
ELF3	Amp_12p12.1	0.474	1
GPC5	Amp_4p16.3	0.474	1
GPC5	Del_4q22.1	0.474	1
NFE2L2	TXNIP	0.474	1
NFE2L2	Amp_9p24.1	0.474	1
NFE2L2	Amp_12p12.1	0.474	1
NFE2L2	Del_12p13.1	0.474	1
TPTE	TSC1	0.474	1
TPTE	3q-Amp	0.474	1
TPTE	Del_2q22.1	0.474	1
TXNIP	7p-Amp	0.474	1
TXNIP	10q-Del	0.474	1
TSC1	Amp_9p24.1	0.474	1
3q-Amp	Amp_9p24.1	0.474	1
3q-Amp	Amp_12p12.1	0.474	1
7p-Amp	Del_12p13.1	0.474	1
10q-Del	Amp_12p12.1	0.474	1
9p-Del	Del_8p23.1	0.474	1
Amp_9p24.1	Del_4q22.1	0.474	1
Amp_12p12.1	Del_4q22.1	0.474	1
Del_2q22.1	Del_12p13.1	0.474	1
Del_4q22.1	Del_12p13.1	0.474	1
Del_12p13.1	Del_15q13.1	0.474	1
RB1	Del_13q14.2	0.475	1
MLL	17p-Del	0.475	1
Amp_11q13.3	Del_13q14.2	0.475	1
FOXA1	Del_11p15.5	0.476	1
KDM6A	FAT1	0.476	1
MIPOL1	Del_11p15.5	0.476	1
20q-Amp	Del_9p23	0.476	1
Amp_17q11.2	Del_9p23	0.476	1
KDM6A	Del_9p21.3	0.477	1
PIK3CA	Amp_2p25.1	0.477	1
PIK3CA	Amp_19q13.43	0.477	1
20p-Amp	Del_9q33.2	0.477	1
5q-Del	Del_9q33.2	0.477	1
Amp_1q21.3	Del_9p21.3	0.477	1
Amp_2p25.1	Del_9q33.2	0.477	1
Amp_19q13.43	Del_9q33.2	0.477	1
Amp_20q11.21	Del_22q13.32	0.477	1
Amp_11p13	Del_8p23.1	0.478	1
CX3CL1	Amp_11q13.3	0.481	1
CX3CL1	Del_16p13.3	0.481	1
EP300	ACRC	0.481	1
EP300	19q-Amp	0.481	1
EP300	Del_1q32.1	0.481	1
FBXW7	Amp_6p22.3	0.481	1
PHLDA3	9q-Del	0.481	1
PHLDA3	Del_5q12.1	0.481	1
PHLDA3	Del_11q23.3	0.481	1
PHLDA3	Del_11q25	0.481	1
RB1	1q-Amp	0.481	1
RB1	Amp_16q22.1	0.481	1
CEP192	Amp_11q13.3	0.481	1
CEP192	Del_16p13.3	0.481	1
ECM1	MLL	0.481	1
ECM1	Amp_11q13.3	0.481	1
ECM1	Del_2q34	0.481	1
MLL	16p-Del	0.481	1
RAD51C	9q-Del	0.481	1
RAD51C	Del_5q12.1	0.481	1
RAD51C	Del_11q23.3	0.481	1
RAD51C	Del_11q25	0.481	1
19q-Amp	Amp_7p21.1	0.481	1
4p-Del	Amp_6p22.3	0.481	1
9q-Del	Amp_6q21	0.481	1
9q-Del	Amp_6q23.3	0.481	1
Amp_6q21	Del_11q23.3	0.481	1
Amp_6q21	Del_11q25	0.481	1
Amp_6q23.3	Del_11q23.3	0.481	1
Amp_7p21.1	Del_1q32.1	0.481	1
Amp_7p21.1	Del_Xq21.33	0.481	1
KLF5	Amp_3q26.33	0.482	1
KLF5	Amp_7p21.1	0.482	1
KLF5	Del_5q12.1	0.482	1
KLF5	Del_11q23.3	0.482	1
KLF5	Del_11q25	0.482	1
9q-Del	Amp_1p34.2	0.482	1
Amp_1p34.2	Del_5q12.1	0.482	1
Amp_1p34.2	Del_11q23.3	0.482	1
Amp_1p34.2	Del_11q25	0.482	1
Amp_3q26.33	Amp_16p11.2	0.482	1
Amp_16p11.2	Del_11q23.3	0.482	1
ERBB3	Amp_7p11.2	0.483	1
SPTAN1	Del_2q37.1	0.483	1
CREBBP	EP300	0.484	1
CREBBP	9q-Del	0.484	1
EP300	5p-Amp	0.484	1
ERCC2	Amp_3q26.33	0.484	1
ERCC2	Del_11q25	0.484	1
FGFR3	Amp_3q26.33	0.484	1
PIK3CA	Amp_9p24.1	0.484	1
PIK3CA	Del_12p13.1	0.484	1
SPTAN1	FAT1	0.484	1
SPTAN1	Amp_17q11.2	0.484	1
STAG2	FAT1	0.484	1
STAG2	Amp_13q22.1	0.484	1
TXNIP	Amp_20q11.21	0.484	1
FAT1	Del_16q23.1	0.484	1
5p-Amp	Amp_3q26.33	0.484	1
5p-Amp	Del_11q25	0.484	1
8q-Amp	18q-Del	0.484	1
8q-Amp	Amp_13q22.1	0.484	1
Amp_3q26.33	Amp_12q15	0.484	1
Amp_7p21.1	Del_19p13.3	0.484	1
Amp_9p24.1	Del_9q33.2	0.484	1
EP300	Amp_1q23.3	0.485	1
MLL2	Del_11q23.3	0.485	1
9q-Del	Amp_19q12	0.485	1
Amp_6p22.3	Del_5q12.1	0.485	1
Amp_19q12	Del_11q25	0.485	1
Del_11q23.3	Del_18q23	0.485	1
BTG2	ERBB3	0.489	1
ERBB3	Amp_4q13.3	0.489	1
ERBB3	Amp_11q22.2	0.489	1
HRAS	MLL2	0.489	1
HRAS	SPTAN1	0.489	1
MLL2	ZFP36L1	0.489	1
SPTAN1	Amp_4q13.3	0.489	1
SPTAN1	Amp_11q22.2	0.489	1
STAG2	ZFP36L1	0.489	1
STAG2	Amp_4q13.3	0.489	1
STAG2	Amp_11q22.2	0.489	1
ZFP36L1	8q-Amp	0.489	1
Amp_4q13.3	Del_16q23.1	0.489	1
Amp_11q22.2	Del_16q23.1	0.489	1
CDKN2A	RXRA	0.49	1
CDKN2A	4p-Del	0.49	1
CDKN2A	Amp_17q12	0.49	1
CDKN2A	Amp_22q12.2	0.49	1
CREBBP	20p-Amp	0.49	1
CREBBP	6q-Del	0.49	1
CREBBP	Del_6p25.3	0.49	1
ERCC2	5q-Del	0.49	1
FBXW7	FOXA1	0.49	1
FBXW7	FOXQ1	0.49	1
FBXW7	RHOB	0.49	1
FBXW7	17q-Amp	0.49	1
FBXW7	3p-Amp	0.49	1
FBXW7	14q-Del	0.49	1
FBXW7	15q-Del	0.49	1
FBXW7	Del_1p36.11	0.49	1
FGFR3	Del_22q13.32	0.49	1
FOXA1	RXRA	0.49	1
FOXA1	4p-Del	0.49	1
FOXA1	Del_14q24.1	0.49	1
FOXQ1	7q-Amp	0.49	1
FOXQ1	Amp_22q12.2	0.49	1
FOXQ1	Del_14q24.1	0.49	1
MIPOL1	7q-Amp	0.49	1
MIPOL1	4p-Del	0.49	1
MIPOL1	Amp_22q12.2	0.49	1
MIPOL1	Del_14q24.1	0.49	1
RHOB	Amp_17q12	0.49	1
RHOB	Amp_22q12.2	0.49	1
RXRA	Del_1p36.11	0.49	1
17q-Amp	4p-Del	0.49	1
3p-Amp	4p-Del	0.49	1
3p-Amp	Del_14q24.1	0.49	1
5p-Amp	Del_22q13.32	0.49	1
7q-Amp	15q-Del	0.49	1
7q-Amp	Del_1p36.11	0.49	1
15q-Del	Amp_17q12	0.49	1
4p-Del	Del_1p36.11	0.49	1
Amp_12q15	Del_22q13.32	0.49	1
Amp_17q12	Del_1p36.11	0.49	1
Amp_19q13.43	Del_19p13.3	0.49	1
Del_4q34.2	Del_6p25.3	0.49	1
RXRA	Amp_8q22.3	0.491	1
4p-Del	Amp_8q22.3	0.491	1
ARID1A	Amp_8q22.3	0.493	1
NFE2L2	Del_11p15.5	0.494	1
3q-Amp	Del_11p15.5	0.494	1
7p-Amp	Del_11p15.5	0.494	1
MLL2	Amp_3p25.2	0.495	1
Amp_1q23.3	Amp_7p11.2	0.496	1
Amp_13q22.1	Del_18q23	0.497	1
ACRC	17p-Del	0.499	1
19q-Amp	17p-Del	0.499	1
19q-Amp	Del_13q14.2	0.499	1
17p-Del	Amp_6q21	0.499	1
17p-Del	Amp_6q23.3	0.499	1
Amp_6q21	Del_13q14.2	0.499	1
Del_1q32.1	Del_13q14.2	0.499	1
ARID1A	Amp_20q11.21	0.5	1
ARID1A	Del_9q33.2	0.5	1
PIK3CA	Del_Xp11.3	0.5	1
19p-Del	Amp_20q11.21	0.5	1
Amp_3p25.2	Del_9q33.2	0.5	1
CDKN1A	Del_9p21.3	0.501	1
FBXW7	Amp_11q13.3	0.501	1
RB1	7q-Amp	0.501	1
RB1	Del_14q24.1	0.501	1
RXRA	MLL	0.501	1
MLL	4p-Del	0.501	1
MLL	Del_14q24.1	0.501	1
Amp_11q13.3	Del_14q24.1	0.501	1
Del_6q27	Del_9p21.3	0.501	1
Del_9p21.3	Del_10q23.31	0.501	1
MLL2	Del_16p13.3	0.502	1
Del_8p23.1	Del_9p23	0.502	1
ASXL2	22q-Del	0.504	1
ASXL2	Amp_16p13.2	0.504	1
CREBBP	ECM1	0.504	1
CREBBP	1q-Amp	0.504	1
CREBBP	Amp_16q22.1	0.504	1
CX3CL1	FGFR3	0.504	1
CX3CL1	5p-Amp	0.504	1
CX3CL1	Del_4q34.2	0.504	1
ERCC2	ECM1	0.504	1
ERCC2	1q-Amp	0.504	1
ERCC2	16p-Del	0.504	1
ERCC2	Amp_16q22.1	0.504	1
FGFR3	ECM1	0.504	1
FGFR3	16p-Del	0.504	1
FGFR3	Amp_16q22.1	0.504	1
CEP192	5p-Amp	0.504	1
CEP192	Amp_12q15	0.504	1
ECM1	Amp_12q15	0.504	1
ECM1	Del_19p13.3	0.504	1
RBM26	22q-Del	0.504	1
RBM26	Amp_16p13.2	0.504	1
1q-Amp	5p-Amp	0.504	1
1q-Amp	Del_19p13.3	0.504	1
5p-Amp	Amp_16q22.1	0.504	1
Amp_12q15	Amp_16q22.1	0.504	1
ARID1A	11q-Del	0.506	1
ARID1A	Amp_17q23.3	0.506	1
ARID1A	Del_6q27	0.506	1
CDKN1A	Amp_3p25.2	0.506	1
TP53	Del_Xp11.3	0.506	1
Amp_3p25.2	Del_10q23.31	0.506	1
Amp_7p11.2	Del_2q37.1	0.507	1
Amp_17q11.2	Del_11p15.5	0.507	1
CDKN1A	Amp_10p14	0.508	1
GPC5	8p-Del	0.508	1
GPC5	9p-Del	0.508	1
TP53	CEP192	0.508	1
TPTE	9p-Del	0.508	1
TPTE	Amp_10p14	0.508	1
TXNIP	9p-Del	0.508	1
20p-Amp	9p-Del	0.508	1
20p-Amp	Amp_10p14	0.508	1
11p-Del	Amp_17q23.3	0.508	1
8p-Del	Amp_12p12.1	0.508	1
8p-Del	Del_3p14.2	0.508	1
9p-Del	Amp_17q23.3	0.508	1
9p-Del	Del_22q13.32	0.508	1
Amp_10p14	Amp_17q23.3	0.508	1
FOXQ1	TP53	0.509	1
GPC5	4q-Del	0.509	1
GPC5	Amp_1p34.2	0.509	1
GPC5	Amp_16p11.2	0.509	1
KLF5	Amp_12p12.1	0.509	1
KLF5	Del_12p13.1	0.509	1
MLL2	Amp_6p22.3	0.509	1
TP53	17q-Amp	0.509	1
TP53	3p-Amp	0.509	1
TP53	15q-Del	0.509	1
TPTE	Amp_1p34.2	0.509	1
TXNIP	Amp_1p34.2	0.509	1
TXNIP	Amp_16p11.2	0.509	1
4q-Del	Amp_9p24.1	0.509	1
Amp_1p34.2	Amp_12p12.1	0.509	1
ERBB3	Amp_3p25.2	0.51	1
SPTAN1	Amp_3p25.2	0.51	1
STAG2	Amp_3p25.2	0.51	1
ELF3	TP53	0.511	1
TP53	7p-Amp	0.511	1
TP53	10q-Del	0.511	1
TP53	Del_15q13.1	0.511	1
Amp_1p34.2	Del_13q14.2	0.511	1
CDKN1A	Del_6q27	0.512	1
CDKN1A	Del_10q23.31	0.512	1
TPTE	Amp_1q23.3	0.512	1
11q-Del	Amp_17q23.3	0.512	1
Amp_6p22.3	Amp_12q15	0.512	1
Amp_8p11.23	Del_3p14.2	0.512	1
Amp_8p11.23	Del_6q27	0.512	1
Amp_17q23.3	Del_6q27	0.512	1
Amp_17q23.3	Del_10q23.31	0.512	1
TP53	Del_2q34	0.514	1
PIK3CA	Del_18q23	0.515	1
19p-Del	Amp_10p14	0.515	1
8p-Del	Del_Xp11.3	0.515	1
Amp_19q12	Amp_20q11.21	0.515	1
HRAS	20p-Amp	0.516	1
HRAS	5q-Del	0.516	1
HRAS	6q-Del	0.516	1
TP53	Del_5q12.1	0.516	1
ZFP36L1	20p-Amp	0.516	1
ZFP36L1	5q-Del	0.516	1
ZFP36L1	Amp_2p25.1	0.516	1
ZFP36L1	Del_22q13.32	0.516	1
RBM26	Amp_19q12	0.516	1
20p-Amp	Amp_4q13.3	0.516	1
20p-Amp	Amp_11q22.2	0.516	1
20q-Amp	Amp_8q22.3	0.516	1
18q-Del	Amp_8q22.3	0.516	1
5q-Del	Amp_4q13.3	0.516	1
5q-Del	Amp_11q22.2	0.516	1
6q-Del	Amp_4q13.3	0.516	1
6q-Del	Amp_11q22.2	0.516	1
Amp_1p34.2	Amp_3p25.2	0.516	1
Amp_4q13.3	Del_6p25.3	0.516	1
Amp_8q22.3	Amp_13q22.1	0.516	1
Amp_16p13.2	Amp_19q12	0.516	1
CDKN1A	ELF3	0.518	1
CDKN1A	3q-Amp	0.518	1
CDKN1A	7p-Amp	0.518	1
ELF3	11q-Del	0.518	1
ELF3	Del_6q27	0.518	1
ELF3	Del_10q23.31	0.518	1
MIPOL1	Amp_6p22.3	0.518	1
NFE2L2	Amp_8p11.23	0.518	1
NFE2L2	Amp_17q23.3	0.518	1
NFE2L2	Del_6q27	0.518	1
TSC1	Del_3p14.2	0.518	1
3q-Amp	Amp_8p11.23	0.518	1
3q-Amp	Del_10q23.31	0.518	1
7p-Amp	11q-Del	0.518	1
7p-Amp	Amp_17q23.3	0.518	1
7p-Amp	Del_3p14.2	0.518	1
Amp_4p16.3	Amp_8p11.23	0.518	1
Amp_4p16.3	Del_6q27	0.518	1
Amp_4p16.3	Del_10q23.31	0.518	1
Amp_8p11.23	Del_4q22.1	0.518	1
Amp_17q23.3	Del_15q13.1	0.518	1
Del_2q22.1	Del_6q27	0.518	1
Del_8p23.1	Del_11q25	0.52	1
ERCC2	17p-Del	0.521	1
5p-Amp	17p-Del	0.521	1
17p-Del	Amp_12q15	0.521	1
Amp_12q15	Del_13q14.2	0.521	1
Amp_19q12	Del_9p21.3	0.521	1
CDKN2A	NFE2L2	0.522	1
CDKN2A	Del_2q22.1	0.522	1
CDKN2A	Del_15q13.1	0.522	1
ELF3	3p-Amp	0.522	1
ELF3	15q-Del	0.522	1
ELF3	Del_1p36.11	0.522	1
FOXA1	7p-Amp	0.522	1
FOXA1	Amp_4p16.3	0.522	1
FOXA1	Del_15q13.1	0.522	1
FOXQ1	NFE2L2	0.522	1
FOXQ1	7p-Amp	0.522	1
FOXQ1	10q-Del	0.522	1
FOXQ1	Amp_4p16.3	0.522	1
FOXQ1	Del_15q13.1	0.522	1
MIPOL1	NFE2L2	0.522	1
MIPOL1	3q-Amp	0.522	1
MIPOL1	7p-Amp	0.522	1
MIPOL1	10q-Del	0.522	1
MIPOL1	Amp_4p16.3	0.522	1
MIPOL1	Del_2q22.1	0.522	1
MIPOL1	Del_4q22.1	0.522	1
MIPOL1	Del_15q13.1	0.522	1
MLL2	Amp_2p25.1	0.522	1
NFE2L2	17q-Amp	0.522	1
NFE2L2	3p-Amp	0.522	1
NFE2L2	14q-Del	0.522	1
RHOB	TSC1	0.522	1
RHOB	Del_2q22.1	0.522	1
TSC1	3p-Amp	0.522	1
TSC1	Del_1p36.11	0.522	1
17q-Amp	3q-Amp	0.522	1
17q-Amp	7p-Amp	0.522	1
17q-Amp	10q-Del	0.522	1
17q-Amp	Amp_4p16.3	0.522	1
3p-Amp	10q-Del	0.522	1
3p-Amp	Del_4q22.1	0.522	1
3p-Amp	Del_15q13.1	0.522	1
3q-Amp	14q-Del	0.522	1
3q-Amp	15q-Del	0.522	1
7p-Amp	15q-Del	0.522	1
7p-Amp	Del_1p36.11	0.522	1
10q-Del	14q-Del	0.522	1
15q-Del	Amp_4p16.3	0.522	1
Amp_4p16.3	Del_1p36.11	0.522	1
Del_1p36.11	Del_4q22.1	0.522	1
ERBB3	STAG2	0.524	1
ERBB3	8q-Amp	0.524	1
ERBB3	Del_16q23.1	0.524	1
STAG2	8q-Amp	0.524	1
STAG2	Del_16q23.1	0.524	1
TSC1	Amp_1q23.3	0.524	1
3q-Amp	Amp_1q23.3	0.524	1
Amp_1q23.3	Del_15q13.1	0.524	1
ARID1A	BTG2	0.527	1
ARID1A	Amp_11q22.2	0.527	1
BTG2	Amp_5p15.33	0.527	1
EP300	9q-Del	0.527	1
EP300	Amp_3q26.33	0.527	1
EP300	Del_11q23.3	0.527	1
HRAS	Amp_5p15.33	0.527	1
ZFP36L1	Amp_5p15.33	0.527	1
FAT1	5q-Del	0.527	1
FAT1	Amp_2p25.1	0.527	1
FAT1	Amp_19q13.43	0.527	1
FAT1	Del_6p25.3	0.527	1
FAT1	Del_22q13.32	0.527	1
20p-Amp	Amp_13q22.1	0.527	1
20p-Amp	Amp_17q11.2	0.527	1
20q-Amp	Amp_2p25.1	0.527	1
18q-Del	Amp_19q13.43	0.527	1
5q-Del	Amp_17q11.2	0.527	1
6q-Del	Amp_13q22.1	0.527	1
Amp_2p25.1	Amp_13q22.1	0.527	1
Amp_3p25.2	Amp_11q22.2	0.527	1
Amp_3q26.33	Amp_7p21.1	0.527	1
Amp_3q26.33	Del_5q12.1	0.527	1
Amp_13q22.1	Amp_19q13.43	0.527	1
CX3CL1	Amp_13q22.1	0.528	1
CEP192	FAT1	0.528	1
CEP192	20q-Amp	0.528	1
CEP192	Amp_13q22.1	0.528	1
ECM1	FAT1	0.528	1
ECM1	20q-Amp	0.528	1
ECM1	Amp_8q22.3	0.528	1
FAT1	1q-Amp	0.528	1
FAT1	16p-Del	0.528	1
FAT1	Amp_16q22.1	0.528	1
1q-Amp	20q-Amp	0.528	1
1q-Amp	18q-Del	0.528	1
1q-Amp	Amp_13q22.1	0.528	1
20q-Amp	Amp_16q22.1	0.528	1
16p-Del	Amp_13q22.1	0.528	1
Amp_13q22.1	Amp_16q22.1	0.528	1
17p-Del	Amp_19q12	0.529	1
Amp_19q12	Del_13q14.2	0.529	1
19p-Del	Amp_7p11.2	0.53	1
Amp_7p11.2	Del_Xp11.3	0.53	1
GPC5	Amp_7p11.2	0.532	1
TPTE	Amp_7p11.2	0.532	1
TXNIP	Del_8p23.1	0.532	1
FAT1	9q-Del	0.532	1
FAT1	Del_5q12.1	0.532	1
FAT1	Del_11q23.3	0.532	1
FAT1	Del_11q25	0.532	1
18q-Del	Amp_7p21.1	0.532	1
9q-Del	Amp_13q22.1	0.532	1
Amp_3q26.33	Amp_17q11.2	0.532	1
Amp_7p11.2	Amp_12p12.1	0.532	1
Amp_7p11.2	Del_12p13.1	0.532	1
Amp_12p12.1	Del_8p23.1	0.532	1
Amp_13q22.1	Del_11q23.3	0.532	1
Amp_13q22.1	Del_11q25	0.532	1
ERBB3	Amp_1q23.3	0.534	1
RB1	Del_17p12	0.534	1
MLL2	Amp_11p13	0.535	1
CREBBP	Amp_17q12	0.536	1
CREBBP	Del_14q24.1	0.536	1
FGFR3	7q-Amp	0.536	1
RXRA	Amp_12q15	0.536	1
5p-Amp	Del_14q24.1	0.536	1
Amp_8q22.3	Del_10q23.31	0.536	1
Amp_17q12	Del_4q34.2	0.536	1
Amp_17q12	Del_19p13.3	0.536	1
Amp_22q12.2	Del_4q34.2	0.536	1
CDKN1A	RAD51C	0.538	1
CDKN1A	Amp_6q21	0.538	1
CDKN1A	Amp_6q23.3	0.538	1
FBXW7	PIK3CA	0.538	1
PHLDA3	11q-Del	0.538	1
PHLDA3	Amp_8p11.23	0.538	1
PHLDA3	Amp_17q23.3	0.538	1
PHLDA3	Del_6q27	0.538	1
PHLDA3	Del_10q23.31	0.538	1
PIK3CA	Amp_17q12	0.538	1
PIK3CA	Del_14q24.1	0.538	1
RXRA	Del_9q33.2	0.538	1
ACRC	Amp_8p11.23	0.538	1
ACRC	Amp_17q23.3	0.538	1
ACRC	Del_3p14.2	0.538	1
RAD51C	11q-Del	0.538	1
RAD51C	Amp_8p11.23	0.538	1
RAD51C	Amp_17q23.3	0.538	1
19q-Amp	11q-Del	0.538	1
7q-Amp	Del_9q33.2	0.538	1
11q-Del	Amp_6q21	0.538	1
4p-Del	Amp_20q11.21	0.538	1
Amp_6q21	Amp_8p11.23	0.538	1
Amp_6q21	Del_3p14.2	0.538	1
Amp_6q21	Del_6q27	0.538	1
Amp_22q12.2	Del_9q33.2	0.538	1
5q-Del	Amp_7p11.2	0.539	1
6q-Del	Amp_7p11.2	0.539	1
Amp_7p11.2	Del_6p25.3	0.539	1
KDM6A	SPTAN1	0.54	1
KDM6A	Amp_8p11.23	0.54	1
KDM6A	Del_10q23.31	0.54	1
KDM6A	Del_16q23.1	0.54	1
Amp_17q23.3	Del_9p23	0.54	1
Del_6q27	Del_9p23	0.54	1
4q-Del	Amp_1q21.3	0.541	1
4q-Del	Del_9p23	0.541	1
Amp_16p11.2	Del_9p23	0.541	1
PIK3CA	Amp_1q21.3	0.542	1
ASXL2	EP300	0.543	1
ASXL2	Del_11q25	0.543	1
EP300	RBM26	0.543	1
EP300	Amp_16p13.2	0.543	1
KDM6A	Del_11p15.5	0.543	1
RB1	Amp_1q23.3	0.543	1
RBM26	Amp_3q26.33	0.543	1
RBM26	Amp_7p21.1	0.543	1
RBM26	Del_5q12.1	0.543	1
Amp_1q23.3	Del_2q34	0.543	1
Amp_3q26.33	Amp_16p13.2	0.543	1
Amp_7p21.1	Amp_16p13.2	0.543	1
BTG2	7q-Amp	0.544	1
BTG2	4p-Del	0.544	1
BTG2	Amp_17q12	0.544	1
BTG2	Amp_22q12.2	0.544	1
FBXW7	Amp_4q13.3	0.544	1
HRAS	7q-Amp	0.544	1
HRAS	Amp_17q12	0.544	1
HRAS	Amp_22q12.2	0.544	1
HRAS	Del_14q24.1	0.544	1
MLL2	Del_13q14.2	0.544	1
RXRA	ZFP36L1	0.544	1
RXRA	Amp_4q13.3	0.544	1
RXRA	Amp_11q22.2	0.544	1
ZFP36L1	7q-Amp	0.544	1
ZFP36L1	4p-Del	0.544	1
ZFP36L1	Amp_22q12.2	0.544	1
ZFP36L1	Del_14q24.1	0.544	1
7q-Amp	Amp_4q13.3	0.544	1
4p-Del	Amp_11q22.2	0.544	1
Amp_11q22.2	Amp_17q12	0.544	1
MLL2	Del_9p23	0.545	1
ASXL2	TPTE	0.546	1
GPC5	RBM26	0.546	1
GPC5	Amp_16p13.2	0.546	1
HRAS	Amp_1q21.3	0.546	1
KDM6A	Amp_8q22.3	0.546	1
TXNIP	RBM26	0.546	1
TXNIP	22q-Del	0.546	1
TXNIP	Amp_16p13.2	0.546	1
RBM26	Amp_12p12.1	0.546	1
22q-Del	Del_12p13.1	0.546	1
Amp_1q21.3	Amp_11q22.2	0.546	1
Amp_16p13.2	Del_12p13.1	0.546	1
ELF3	Amp_6p22.3	0.547	1
3q-Amp	Amp_6p22.3	0.547	1
Amp_4p16.3	Amp_6p22.3	0.547	1
Amp_6p22.3	Del_15q13.1	0.547	1
ELF3	Del_8p23.1	0.548	1
ERBB3	Amp_19q12	0.549	1
SPTAN1	Amp_19q12	0.549	1
8q-Amp	Amp_19q12	0.549	1
ELF3	MLL	0.55	1
ELF3	Amp_11q13.3	0.55	1
ELF3	Del_2q34	0.55	1
ELF3	Del_16p13.3	0.55	1
MLL2	22q-Del	0.55	1
NFE2L2	MLL	0.55	1
NFE2L2	Amp_11q13.3	0.55	1
NFE2L2	Del_2q34	0.55	1
NFE2L2	Del_16p13.3	0.55	1
RB1	3q-Amp	0.55	1
RB1	7p-Amp	0.55	1
RB1	Amp_4p16.3	0.55	1
TSC1	MLL	0.55	1
TSC1	Del_2q34	0.55	1
TSC1	Del_16p13.3	0.55	1
MLL	10q-Del	0.55	1
MLL	Amp_4p16.3	0.55	1
3q-Amp	Del_16p13.3	0.55	1
7p-Amp	Amp_11q13.3	0.55	1
7p-Amp	Del_2q34	0.55	1
Amp_11q13.3	Del_4q22.1	0.55	1
ARID1A	8p-Del	0.551	1
ARID1A	9p-Del	0.551	1
11p-Del	Amp_3p25.2	0.551	1
8p-Del	Amp_3p25.2	0.551	1
CX3CL1	SPTAN1	0.552	1
CX3CL1	STAG2	0.552	1
ERBB3	ECM1	0.552	1
ERBB3	Amp_16q22.1	0.552	1
SPTAN1	ECM1	0.552	1
SPTAN1	1q-Amp	0.552	1
STAG2	CEP192	0.552	1
STAG2	ECM1	0.552	1
STAG2	16p-Del	0.552	1
CEP192	8q-Amp	0.552	1
1q-Amp	Del_9p21.3	0.552	1
16p-Del	Del_9p21.3	0.552	1
Amp_16q22.1	Del_16q23.1	0.552	1
GPC5	Amp_8q22.3	0.553	1
TPTE	Amp_8q22.3	0.553	1
TXNIP	Amp_8q22.3	0.553	1
Amp_8q22.3	Del_12p13.1	0.553	1
CDKN1A	Del_16p13.3	0.554	1
RB1	11q-Del	0.554	1
RB1	Amp_8p11.23	0.554	1
RB1	Del_6q27	0.554	1
MLL	Amp_8p11.23	0.554	1
MLL	Del_3p14.2	0.554	1
MLL	Del_6q27	0.554	1
MLL	Del_10q23.31	0.554	1
Amp_8p11.23	Amp_11q13.3	0.554	1
Amp_8p11.23	Del_2q34	0.554	1
Amp_11q13.3	Del_10q23.31	0.554	1
Amp_17q23.3	Del_2q34	0.554	1
CDKN2A	Amp_1p34.2	0.555	1
CDKN2A	Amp_16p11.2	0.555	1
FOXA1	4q-Del	0.555	1
FOXA1	Amp_1p34.2	0.555	1
FOXA1	Amp_16p11.2	0.555	1
FOXQ1	Amp_1p34.2	0.555	1
FOXQ1	Amp_16p11.2	0.555	1
KLF5	MIPOL1	0.555	1
KLF5	3p-Amp	0.555	1
KLF5	14q-Del	0.555	1
KLF5	15q-Del	0.555	1
KLF5	Del_1p36.11	0.555	1
MIPOL1	4q-Del	0.555	1
MIPOL1	Amp_1p34.2	0.555	1
MIPOL1	Amp_16p11.2	0.555	1
RHOB	Amp_16p11.2	0.555	1
17q-Amp	4q-Del	0.555	1
3p-Amp	4q-Del	0.555	1
3p-Amp	Amp_1p34.2	0.555	1
3p-Amp	Amp_16p11.2	0.555	1
14q-Del	Amp_1p34.2	0.555	1
4q-Del	Del_1p36.11	0.555	1
9p-Del	Amp_19q12	0.555	1
Amp_1p34.2	Del_1p36.11	0.555	1
ARID1A	Amp_11p13	0.558	1
ARID1A	Del_7q36.3	0.558	1
Amp_5p15.33	Amp_7p21.1	0.558	1
Amp_5p15.33	Amp_11p13	0.558	1
Amp_5p15.33	Del_7q36.3	0.558	1
PHLDA3	Amp_11q13.3	0.559	1
PHLDA3	Del_2q34	0.559	1
RB1	ACRC	0.559	1
RB1	19q-Amp	0.559	1
RB1	Amp_6q21	0.559	1
RB1	Del_1q32.1	0.559	1
RB1	Del_Xq21.33	0.559	1
ACRC	MLL	0.559	1
ACRC	Amp_11q13.3	0.559	1
ACRC	Del_16p13.3	0.559	1
MLL	Amp_6q23.3	0.559	1
MLL	Del_Xq21.33	0.559	1
RAD51C	Amp_11q13.3	0.559	1
RAD51C	Del_16p13.3	0.559	1
19q-Amp	Amp_11q13.3	0.559	1
Amp_6q21	Amp_11q13.3	0.559	1
Amp_6q21	Del_2q34	0.559	1
Amp_11q13.3	Del_1q32.1	0.559	1
Del_1q32.1	Del_16p13.3	0.559	1
MLL	8p-Del	0.56	1
MLL	9p-Del	0.56	1
8p-Del	Amp_11q13.3	0.56	1
CDKN2A	Del_9q33.2	0.561	1
FOXA1	PIK3CA	0.561	1
FOXA1	Amp_20q11.21	0.561	1
FOXQ1	PIK3CA	0.561	1
MIPOL1	Amp_20q11.21	0.561	1
MIPOL1	Del_9q33.2	0.561	1
17q-Amp	Del_9q33.2	0.561	1
3p-Amp	Del_9q33.2	0.561	1
15q-Del	Del_9q33.2	0.561	1
Del_1p36.11	Del_9q33.2	0.561	1
CDKN2A	Del_9p21.3	0.562	1
FOXQ1	Del_9p21.3	0.562	1
MIPOL1	Del_9p21.3	0.562	1
19p-Del	Amp_19q12	0.562	1
Amp_19q12	Del_Xp11.3	0.562	1
Del_18q23	Del_Xp11.3	0.562	1
EP300	Amp_20q11.21	0.563	1
PIK3CA	Del_11q25	0.563	1
Amp_4q13.3	Del_11p15.5	0.565	1
ARID1A	RB1	0.566	1
FGFR3	MLL2	0.566	1
KLF5	Del_11p15.5	0.566	1
MLL2	5p-Amp	0.566	1
MLL2	Amp_12q15	0.566	1
MLL2	Del_19p13.3	0.566	1
RB1	Amp_3p25.2	0.566	1
SPTAN1	Amp_2p25.1	0.566	1
SPTAN1	Amp_19q13.43	0.566	1
STAG2	Amp_19q13.43	0.566	1
20p-Amp	8q-Amp	0.566	1
Amp_5p15.33	Del_2q34	0.566	1
FBXW7	8p-Del	0.567	1
7q-Amp	11p-Del	0.567	1
7q-Amp	9p-Del	0.567	1
11p-Del	Amp_17q12	0.567	1
11p-Del	Amp_22q12.2	0.567	1
8p-Del	Amp_17q12	0.567	1
9p-Del	Amp_17q12	0.567	1
Amp_10p14	Amp_17q12	0.567	1
Amp_10p14	Amp_22q12.2	0.567	1
Amp_10p14	Del_14q24.1	0.567	1
FAT1	17p-Del	0.568	1
20q-Amp	Del_13q14.2	0.568	1
17p-Del	Amp_13q22.1	0.568	1
17p-Del	Amp_17q11.2	0.568	1
Amp_13q22.1	Del_13q14.2	0.568	1
KDM6A	Del_7q36.3	0.57	1
RBM26	17p-Del	0.57	1
Amp_3q26.33	Del_13q14.2	0.57	1
Amp_11p13	Del_9p23	0.57	1
Amp_16p13.2	Del_9p21.3	0.57	1
CDKN1A	KLF5	0.571	1
CDKN1A	Amp_1p34.2	0.571	1
CDKN1A	Amp_16p11.2	0.571	1
KLF5	Amp_8p11.23	0.571	1
KLF5	Del_6q27	0.571	1
11q-Del	Amp_16p11.2	0.571	1
4q-Del	Amp_17q23.3	0.571	1
Amp_1p34.2	Amp_8p11.23	0.571	1
Amp_1p34.2	Del_3p14.2	0.571	1
Amp_1p34.2	Del_10q23.31	0.571	1
Amp_8q22.3	Del_2q37.1	0.571	1
Amp_16p11.2	Amp_17q23.3	0.571	1
Amp_16p11.2	Del_3p14.2	0.571	1
ELF3	Amp_8q22.3	0.572	1
FBXW7	20q-Amp	0.572	1
FBXW7	Amp_13q22.1	0.572	1
FBXW7	Amp_17q11.2	0.572	1
RXRA	FAT1	0.572	1
FAT1	Amp_22q12.2	0.572	1
FAT1	Del_14q24.1	0.572	1
20q-Amp	4p-Del	0.572	1
3q-Amp	Amp_8q22.3	0.572	1
7q-Amp	Amp_17q11.2	0.572	1
18q-Del	Amp_22q12.2	0.572	1
4p-Del	Amp_17q11.2	0.572	1
Amp_13q22.1	Amp_17q12	0.572	1
Amp_13q22.1	Amp_22q12.2	0.572	1
MLL	Del_8p23.1	0.573	1
Amp_11q13.3	Del_8p23.1	0.573	1
BTG2	NFE2L2	0.574	1
BTG2	3q-Amp	0.574	1
BTG2	7p-Amp	0.574	1
BTG2	Del_4q22.1	0.574	1
BTG2	Del_15q13.1	0.574	1
ELF3	HRAS	0.574	1
ELF3	ZFP36L1	0.574	1
ELF3	Amp_11q22.2	0.574	1
HRAS	NFE2L2	0.574	1
HRAS	TSC1	0.574	1
HRAS	10q-Del	0.574	1
HRAS	Amp_4p16.3	0.574	1
HRAS	Del_4q22.1	0.574	1
HRAS	Del_15q13.1	0.574	1
NFE2L2	ZFP36L1	0.574	1
NFE2L2	Amp_4q13.3	0.574	1
NFE2L2	Amp_11q22.2	0.574	1
ZFP36L1	7p-Amp	0.574	1
ZFP36L1	10q-Del	0.574	1
ZFP36L1	Amp_4p16.3	0.574	1
ZFP36L1	Del_15q13.1	0.574	1
TSC1	Amp_11q22.2	0.574	1
3q-Amp	Amp_4q13.3	0.574	1
7p-Amp	Amp_4q13.3	0.574	1
10q-Del	Amp_4q13.3	0.574	1
10q-Del	Amp_11q22.2	0.574	1
Amp_4p16.3	Amp_4q13.3	0.574	1
Amp_4q13.3	Del_2q22.1	0.574	1
Amp_11q22.2	Del_2q22.1	0.574	1
Amp_11q22.2	Del_4q22.1	0.574	1
ARID1A	Amp_2p25.1	0.577	1
ARID1A	Amp_19q13.43	0.577	1
ARID1A	Del_22q13.32	0.577	1
CX3CL1	5q-Del	0.577	1
CEP192	20p-Amp	0.577	1
CEP192	Amp_2p25.1	0.577	1
ECM1	20p-Amp	0.577	1
ECM1	5q-Del	0.577	1
ECM1	6q-Del	0.577	1
ECM1	Amp_2p25.1	0.577	1
ECM1	Amp_19q13.43	0.577	1
ECM1	Del_6p25.3	0.577	1
ECM1	Del_22q13.32	0.577	1
1q-Amp	20p-Amp	0.577	1
1q-Amp	5q-Del	0.577	1
1q-Amp	Del_6p25.3	0.577	1
20p-Amp	Amp_5p15.33	0.577	1
20p-Amp	Amp_16q22.1	0.577	1
5q-Del	Amp_3p25.2	0.577	1
6q-Del	Amp_3p25.2	0.577	1
6q-Del	Amp_16q22.1	0.577	1
Del_9p21.3	Del_15q13.1	0.577	1
FGFR3	PIK3CA	0.578	1
EP300	Del_Xp11.3	0.579	1
19p-Del	Amp_7p21.1	0.579	1
Amp_3q26.33	Del_Xp11.3	0.579	1
Amp_7p21.1	Del_Xp11.3	0.579	1
CREBBP	ACRC	0.58	1
CREBBP	19q-Amp	0.58	1
CREBBP	Amp_6q23.3	0.58	1
CREBBP	Del_Xq21.33	0.58	1
ERCC2	ACRC	0.58	1
ERCC2	19q-Amp	0.58	1
ERCC2	Del_1q32.1	0.58	1
ERCC2	Del_Xq21.33	0.58	1
FGFR3	PHLDA3	0.58	1
FGFR3	ACRC	0.58	1
FGFR3	RAD51C	0.58	1
FGFR3	Amp_6q21	0.58	1
FGFR3	Amp_6q23.3	0.58	1
PHLDA3	5p-Amp	0.58	1
PHLDA3	Amp_12q15	0.58	1
PHLDA3	Del_4q34.2	0.58	1
PHLDA3	Del_19p13.3	0.58	1
ACRC	5p-Amp	0.58	1
ACRC	Del_4q34.2	0.58	1
RAD51C	Amp_12q15	0.58	1
19q-Amp	5p-Amp	0.58	1
5p-Amp	Amp_6q21	0.58	1
5p-Amp	Del_1q32.1	0.58	1
5p-Amp	Del_Xq21.33	0.58	1
Amp_6q21	Del_4q34.2	0.58	1
Amp_6q21	Del_19p13.3	0.58	1
Amp_6q23.3	Amp_12q15	0.58	1
Amp_6q23.3	Del_19p13.3	0.58	1
Amp_12q15	Del_1q32.1	0.58	1
Del_19p13.3	Del_Xq21.33	0.58	1
EP300	ERBB3	0.582	1
EP300	SPTAN1	0.582	1
ERBB3	Del_11q23.3	0.582	1
ERBB3	Del_11q25	0.582	1
SPTAN1	Del_11q23.3	0.582	1
SPTAN1	Del_11q25	0.582	1
STAG2	Amp_3q26.33	0.582	1
STAG2	Del_5q12.1	0.582	1
TPTE	Amp_19q12	0.582	1
TPTE	Del_18q23	0.582	1
8q-Amp	Amp_7p21.1	0.582	1
8q-Amp	Del_11q25	0.582	1
9q-Del	Del_16q23.1	0.582	1
Amp_9p24.1	Amp_19q12	0.582	1
Amp_9p24.1	Del_18q23	0.582	1
Amp_11p13	Del_11p15.5	0.582	1
Amp_12p12.1	Amp_19q12	0.582	1
Amp_19q12	Del_12p13.1	0.582	1
Del_7q36.3	Del_11p15.5	0.582	1
Del_11q23.3	Del_16q23.1	0.582	1
Del_11q25	Del_16q23.1	0.582	1
FOXA1	8p-Del	0.583	1
MIPOL1	11p-Del	0.583	1
MIPOL1	8p-Del	0.583	1
MIPOL1	Amp_10p14	0.583	1
17q-Amp	11p-Del	0.583	1
17q-Amp	9p-Del	0.583	1
3p-Amp	11p-Del	0.583	1
3p-Amp	8p-Del	0.583	1
3p-Amp	9p-Del	0.583	1
14q-Del	Amp_10p14	0.583	1
15q-Del	Amp_10p14	0.583	1
8p-Del	Del_1p36.11	0.583	1
Amp_10p14	Del_1p36.11	0.583	1
CREBBP	ELF3	0.584	1
CREBBP	NFE2L2	0.584	1
CREBBP	Del_2q22.1	0.584	1
ELF3	Del_19p13.3	0.584	1
ERCC2	NFE2L2	0.584	1
FGFR3	3q-Amp	0.584	1
FGFR3	7p-Amp	0.584	1
FGFR3	Del_15q13.1	0.584	1
NFE2L2	Amp_12q15	0.584	1
TSC1	5p-Amp	0.584	1
3q-Amp	Del_4q34.2	0.584	1
10q-Del	Amp_12q15	0.584	1
6q-Del	Del_9p21.3	0.584	1
Amp_2p25.1	Del_9p21.3	0.584	1
Amp_4p16.3	Del_19p13.3	0.584	1
Amp_12q15	Del_4q22.1	0.584	1
Del_6p25.3	Del_9p21.3	0.584	1
GPC5	TPTE	0.585	1
GPC5	TXNIP	0.585	1
GPC5	Amp_9p24.1	0.585	1
GPC5	Amp_12p12.1	0.585	1
TPTE	TXNIP	0.585	1
TPTE	Amp_12p12.1	0.585	1
TPTE	Del_12p13.1	0.585	1
TXNIP	Amp_9p24.1	0.585	1
Amp_9p24.1	Amp_12p12.1	0.585	1
SPTAN1	Amp_8q22.3	0.588	1
ARID1A	Amp_3p25.2	0.589	1
ASXL2	CDKN2A	0.59	1
ASXL2	FOXA1	0.59	1
ASXL2	3p-Amp	0.59	1
ASXL2	15q-Del	0.59	1
ASXL2	Del_1p36.11	0.59	1
CDKN2A	RBM26	0.59	1
CDKN2A	Amp_16p13.2	0.59	1
FOXA1	RBM26	0.59	1
FOXA1	22q-Del	0.59	1
FOXQ1	22q-Del	0.59	1
MIPOL1	RBM26	0.59	1
MIPOL1	22q-Del	0.59	1
RHOB	Amp_16p13.2	0.59	1
RBM26	3p-Amp	0.59	1
RBM26	14q-Del	0.59	1
RBM26	15q-Del	0.59	1
RBM26	Del_1p36.11	0.59	1
17q-Amp	22q-Del	0.59	1
3p-Amp	22q-Del	0.59	1
3p-Amp	Amp_16p13.2	0.59	1
14q-Del	Amp_16p13.2	0.59	1
Amp_16p13.2	Del_1p36.11	0.59	1
Amp_13q22.1	Del_9p21.3	0.591	1
Amp_17q11.2	Del_9p21.3	0.591	1
KDM6A	Amp_10p14	0.592	1
9p-Del	Amp_1q21.3	0.592	1
EP300	KDM6A	0.594	1
FBXW7	MLL2	0.594	1
KDM6A	Amp_7p21.1	0.594	1
MLL2	Del_14q24.1	0.594	1
ASXL2	Amp_5p15.33	0.595	1
MLL2	ECM1	0.595	1
MLL2	Amp_16q22.1	0.595	1
RB1	Amp_11q13.3	0.595	1
MLL	Del_2q34	0.595	1
MLL	Del_16p13.3	0.595	1
22q-Del	Amp_3p25.2	0.595	1
Amp_11q13.3	Del_2q34	0.595	1
Amp_11q13.3	Del_2q37.1	0.595	1
Del_13q14.2	Del_Xp11.3	0.595	1
ERCC2	Del_17p12	0.596	1
PIK3CA	8p-Del	0.596	1
PIK3CA	9p-Del	0.596	1
PIK3CA	Amp_10p14	0.596	1
8p-Del	Del_9q33.2	0.596	1
Amp_7p11.2	Del_18q23	0.596	1
Amp_10p14	Del_9q33.2	0.596	1
CDKN1A	ERCC2	0.597	1
CDKN1A	Amp_12q15	0.597	1
CREBBP	Del_6q27	0.597	1
CREBBP	Del_10q23.31	0.597	1
ERCC2	11q-Del	0.597	1
ERCC2	Amp_8p11.23	0.597	1
ERCC2	Amp_17q23.3	0.597	1
5p-Amp	Del_3p14.2	0.597	1
Amp_7p11.2	Del_14q24.1	0.597	1
Amp_8p11.23	Amp_12q15	0.597	1
Amp_12q15	Del_3p14.2	0.597	1
Amp_17q12	Del_2q37.1	0.597	1
Amp_17q23.3	Del_19p13.3	0.597	1
KDM6A	Amp_11q13.3	0.598	1
MLL	Del_9p23	0.598	1
Del_2q34	Del_9p21.3	0.598	1
ELF3	Amp_20q11.21	0.601	1
NFE2L2	PIK3CA	0.601	1
PHLDA3	20q-Amp	0.601	1
PHLDA3	18q-Del	0.601	1
PHLDA3	Amp_17q11.2	0.601	1
PIK3CA	10q-Del	0.601	1
PIK3CA	Amp_4p16.3	0.601	1
ACRC	18q-Del	0.601	1
ACRC	Amp_13q22.1	0.601	1
ACRC	Amp_17q11.2	0.601	1
FAT1	19q-Amp	0.601	1
FAT1	Amp_6q21	0.601	1
FAT1	Amp_6q23.3	0.601	1
FAT1	Del_Xq21.33	0.601	1
RAD51C	20q-Amp	0.601	1
RAD51C	Amp_13q22.1	0.601	1
RAD51C	Amp_17q11.2	0.601	1
19q-Amp	20q-Amp	0.601	1
20q-Amp	Amp_6q23.3	0.601	1
18q-Del	Amp_6q21	0.601	1
18q-Del	Del_1q32.1	0.601	1
18q-Del	Del_Xq21.33	0.601	1
Amp_13q22.1	Del_1q32.1	0.601	1
KLF5	RB1	0.602	1
KLF5	Del_2q34	0.602	1
KLF5	Del_16p13.3	0.602	1
RB1	4q-Del	0.602	1
MLL	4q-Del	0.602	1
MLL	Amp_1p34.2	0.602	1
MLL	Amp_16p11.2	0.602	1
20p-Amp	Amp_19q12	0.602	1
8p-Del	9q-Del	0.602	1
8p-Del	Del_11q25	0.602	1
Amp_1p34.2	Amp_11q13.3	0.602	1
Amp_10p14	Del_11q23.3	0.602	1
Amp_19q12	Del_6p25.3	0.602	1
Amp_19q12	Del_22q13.32	0.602	1
ARID1A	Amp_7p11.2	0.603	1
MLL	Amp_8q22.3	0.603	1
CX3CL1	7q-Amp	0.604	1
CX3CL1	4p-Del	0.604	1
CX3CL1	Amp_17q12	0.604	1
FBXW7	CEP192	0.604	1
FBXW7	ECM1	0.604	1
FBXW7	1q-Amp	0.604	1
FBXW7	16p-Del	0.604	1
FBXW7	Amp_16q22.1	0.604	1
HRAS	Amp_6p22.3	0.604	1
RXRA	1q-Amp	0.604	1
RXRA	16p-Del	0.604	1
RXRA	Amp_16q22.1	0.604	1
ZFP36L1	Amp_6p22.3	0.604	1
CEP192	7q-Amp	0.604	1
CEP192	4p-Del	0.604	1
ECM1	7q-Amp	0.604	1
ECM1	Del_14q24.1	0.604	1
1q-Amp	4p-Del	0.604	1
1q-Amp	Del_14q24.1	0.604	1
4p-Del	Amp_16q22.1	0.604	1
Amp_4q13.3	Amp_6p22.3	0.604	1
Amp_16q22.1	Amp_22q12.2	0.604	1
BTG2	KLF5	0.605	1
BTG2	4q-Del	0.605	1
BTG2	Amp_1p34.2	0.605	1
HRAS	KLF5	0.605	1
HRAS	Amp_1p34.2	0.605	1
HRAS	Amp_16p11.2	0.605	1
KDM6A	Amp_2p25.1	0.605	1
KLF5	Amp_11q22.2	0.605	1
ZFP36L1	4q-Del	0.605	1
ZFP36L1	Amp_16p11.2	0.605	1
20p-Amp	Amp_1q21.3	0.605	1
20p-Amp	Amp_2p25.1	0.605	1
20p-Amp	Amp_19q13.43	0.605	1
20p-Amp	Del_6p25.3	0.605	1
20p-Amp	Del_22q13.32	0.605	1
4q-Del	Amp_11q22.2	0.605	1
6q-Del	Del_9p23	0.605	1
Amp_2p25.1	Del_6p25.3	0.605	1
Amp_11q22.2	Amp_16p11.2	0.605	1
CDKN2A	Amp_7p11.2	0.606	1
CDKN2A	Del_2q37.1	0.606	1
Amp_7p11.2	Del_1p36.11	0.606	1
EP300	GPC5	0.607	1
EP300	Amp_9p24.1	0.607	1
GPC5	Amp_7p21.1	0.607	1
GPC5	Del_11q23.3	0.607	1
GPC5	Del_11q25	0.607	1
TPTE	9q-Del	0.607	1
TPTE	Amp_3q26.33	0.607	1
TXNIP	9q-Del	0.607	1
9q-Del	Amp_9p24.1	0.607	1
Amp_3q26.33	Del_12p13.1	0.607	1
Amp_7p21.1	Amp_12p12.1	0.607	1
Amp_7p21.1	Del_12p13.1	0.607	1
Amp_9p24.1	Del_5q12.1	0.607	1
Amp_9p24.1	Del_11q23.3	0.607	1
Amp_9p24.1	Del_11q25	0.607	1
Amp_12p12.1	Del_11q23.3	0.607	1
Del_5q12.1	Del_12p13.1	0.607	1
Del_11q25	Del_12p13.1	0.607	1
ERBB3	FBXW7	0.608	1
ERBB3	4p-Del	0.608	1
ERBB3	Amp_17q12	0.608	1
FBXW7	SPTAN1	0.608	1
FBXW7	Del_16q23.1	0.608	1
RXRA	SPTAN1	0.608	1
SPTAN1	4p-Del	0.608	1
SPTAN1	Amp_17q12	0.608	1
TP53	Del_18q23	0.608	1
PIK3CA	17p-Del	0.611	1
TP53	Del_13q14.2	0.611	1
ERCC2	11p-Del	0.612	1
FGFR3	8p-Del	0.612	1
ECM1	Del_17p12	0.612	1
5p-Amp	9p-Del	0.612	1
5p-Amp	Amp_10p14	0.612	1
5q-Del	Amp_1q23.3	0.612	1
8p-Del	Amp_12q15	0.612	1
ARID1A	17p-Del	0.613	1
17p-Del	Amp_3p25.2	0.613	1
CDKN2A	Amp_1q23.3	0.614	1
CREBBP	Amp_1q23.3	0.614	1
FOXA1	Amp_1q23.3	0.614	1
TP53	Amp_17q23.3	0.614	1
Amp_1q23.3	Amp_12q15	0.614	1
4q-Del	Amp_6p22.3	0.616	1
ERBB3	17p-Del	0.617	1
ERBB3	Del_13q14.2	0.617	1
8q-Amp	Del_13q14.2	0.617	1
ELF3	18q-Del	0.618	1
ELF3	Amp_13q22.1	0.618	1
NFE2L2	20q-Amp	0.618	1
NFE2L2	18q-Del	0.618	1
NFE2L2	Amp_13q22.1	0.618	1
TSC1	FAT1	0.618	1
TSC1	18q-Del	0.618	1
FAT1	3q-Amp	0.618	1
FAT1	Amp_4p16.3	0.618	1
FAT1	Del_2q22.1	0.618	1
FAT1	Del_4q22.1	0.618	1
FAT1	Del_15q13.1	0.618	1
20q-Amp	3q-Amp	0.618	1
20q-Amp	Amp_4p16.3	0.618	1
3q-Amp	18q-Del	0.618	1
3q-Amp	Amp_13q22.1	0.618	1
3q-Amp	Amp_17q11.2	0.618	1
18q-Del	Del_2q22.1	0.618	1
Amp_4p16.3	Amp_17q11.2	0.618	1
Amp_13q22.1	Del_2q22.1	0.618	1
Amp_13q22.1	Del_15q13.1	0.618	1
Amp_16p13.2	Del_9p23	0.618	1
Amp_17q11.2	Del_15q13.1	0.618	1
CDKN1A	Del_18q23	0.62	1
Amp_22q12.2	Del_17p12	0.62	1
ERBB3	TP53	0.623	1
ERBB3	Amp_6q21	0.623	1
ERBB3	Amp_6q23.3	0.623	1
ERBB3	Del_1q32.1	0.623	1
PHLDA3	STAG2	0.623	1
PHLDA3	8q-Amp	0.623	1
PHLDA3	Del_16q23.1	0.623	1
SPTAN1	TP53	0.623	1
SPTAN1	ACRC	0.623	1
SPTAN1	Amp_6q21	0.623	1
SPTAN1	Amp_6q23.3	0.623	1
STAG2	ACRC	0.623	1
STAG2	RAD51C	0.623	1
STAG2	19q-Amp	0.623	1
STAG2	Amp_6q21	0.623	1
STAG2	Amp_6q23.3	0.623	1
STAG2	Del_Xq21.33	0.623	1
ACRC	8q-Amp	0.623	1
RAD51C	8q-Amp	0.623	1
Amp_6q21	Del_16q23.1	0.623	1
Amp_6q23.3	Del_16q23.1	0.623	1
Del_1q32.1	Del_16q23.1	0.623	1
ASXL2	Del_3p14.2	0.626	1
RBM26	11q-Del	0.626	1
RBM26	Del_10q23.31	0.626	1
11q-Del	Amp_16p13.2	0.626	1
22q-Del	Amp_17q23.3	0.626	1
Amp_16p13.2	Amp_17q23.3	0.626	1
Amp_16p13.2	Del_3p14.2	0.626	1
ARID1A	CREBBP	0.627	1
ARID1A	ERCC2	0.627	1
ARID1A	Amp_12q15	0.627	1
CDKN2A	Amp_9p24.1	0.627	1
CDKN2A	Amp_12p12.1	0.627	1
FOXA1	TXNIP	0.627	1
FOXA1	Amp_9p24.1	0.627	1
FOXA1	Del_12p13.1	0.627	1
FOXQ1	GPC5	0.627	1
FOXQ1	TPTE	0.627	1
FOXQ1	TXNIP	0.627	1
FOXQ1	Amp_12p12.1	0.627	1
FOXQ1	Del_12p13.1	0.627	1
GPC5	MIPOL1	0.627	1
GPC5	17q-Amp	0.627	1
GPC5	Del_1p36.11	0.627	1
MIPOL1	TPTE	0.627	1
MIPOL1	TXNIP	0.627	1
MIPOL1	Amp_12p12.1	0.627	1
RHOB	TXNIP	0.627	1
TPTE	3p-Amp	0.627	1
TXNIP	17q-Amp	0.627	1
TXNIP	15q-Del	0.627	1
TXNIP	Del_1p36.11	0.627	1
17q-Amp	Del_12p13.1	0.627	1
3p-Amp	Amp_9p24.1	0.627	1
3p-Amp	Amp_12p12.1	0.627	1
15q-Del	Amp_9p24.1	0.627	1
15q-Del	Amp_12p12.1	0.627	1
15q-Del	Del_12p13.1	0.627	1
Amp_3p25.2	Amp_12q15	0.627	1
Amp_5p15.33	Del_19p13.3	0.627	1
Amp_9p24.1	Del_1p36.11	0.627	1
Amp_12p12.1	Del_1p36.11	0.627	1
Del_1p36.11	Del_12p13.1	0.627	1
ELF3	8p-Del	0.628	1
ELF3	9p-Del	0.628	1
NFE2L2	8p-Del	0.628	1
TSC1	8p-Del	0.628	1
3q-Amp	9p-Del	0.628	1
3q-Amp	Amp_10p14	0.628	1
9p-Del	Del_15q13.1	0.628	1
Amp_4p16.3	Amp_10p14	0.628	1
Amp_10p14	Del_4q22.1	0.628	1
ARID1A	CEP192	0.629	1
ARID1A	16p-Del	0.629	1
ARID1A	Amp_16q22.1	0.629	1
SPTAN1	Amp_6p22.3	0.629	1
CEP192	Amp_5p15.33	0.629	1
ECM1	Amp_3p25.2	0.629	1
1q-Amp	Amp_5p15.33	0.629	1
16p-Del	Amp_3p25.2	0.629	1
Amp_5p15.33	Amp_16q22.1	0.629	1
RXRA	TP53	0.63	1
TP53	7q-Amp	0.63	1
TP53	Amp_17q12	0.63	1
19p-Del	Amp_17q23.3	0.63	1
Amp_8p11.23	Del_Xp11.3	0.63	1
Del_3p14.2	Del_Xp11.3	0.63	1
Del_6q27	Del_Xp11.3	0.63	1
Del_10q23.31	Del_Xp11.3	0.63	1
CX3CL1	ELF3	0.631	1
CX3CL1	NFE2L2	0.631	1
CX3CL1	TSC1	0.631	1
CX3CL1	3q-Amp	0.631	1
CX3CL1	7p-Amp	0.631	1
CX3CL1	Amp_4p16.3	0.631	1
CX3CL1	Del_2q22.1	0.631	1
CX3CL1	Del_4q22.1	0.631	1
CX3CL1	Del_15q13.1	0.631	1
ELF3	CEP192	0.631	1
ELF3	16p-Del	0.631	1
MLL2	20q-Amp	0.631	1
NFE2L2	ECM1	0.631	1
NFE2L2	1q-Amp	0.631	1
NFE2L2	16p-Del	0.631	1
NFE2L2	Amp_16q22.1	0.631	1
PIK3CA	Amp_11p13	0.631	1
PIK3CA	Del_7q36.3	0.631	1
TSC1	16p-Del	0.631	1
CEP192	3q-Amp	0.631	1
CEP192	7p-Amp	0.631	1
CEP192	10q-Del	0.631	1
CEP192	Amp_4p16.3	0.631	1
CEP192	Del_4q22.1	0.631	1
ECM1	3q-Amp	0.631	1
ECM1	7p-Amp	0.631	1
ECM1	10q-Del	0.631	1
ECM1	Amp_4p16.3	0.631	1
ECM1	Del_2q22.1	0.631	1
ECM1	Del_15q13.1	0.631	1
1q-Amp	3q-Amp	0.631	1
1q-Amp	7p-Amp	0.631	1
1q-Amp	10q-Del	0.631	1
1q-Amp	Amp_4p16.3	0.631	1
1q-Amp	Del_2q22.1	0.631	1
1q-Amp	Del_4q22.1	0.631	1
1q-Amp	Del_15q13.1	0.631	1
3q-Amp	16p-Del	0.631	1
7p-Amp	16p-Del	0.631	1
7p-Amp	Amp_16q22.1	0.631	1
10q-Del	Amp_16q22.1	0.631	1
16p-Del	Amp_4p16.3	0.631	1
Amp_11p13	Del_9q33.2	0.631	1
Amp_16q22.1	Del_2q22.1	0.631	1
Amp_16q22.1	Del_4q22.1	0.631	1
Amp_16q22.1	Del_15q13.1	0.631	1
Amp_20q11.21	Del_7q36.3	0.631	1
Del_7q36.3	Del_9q33.2	0.631	1
CDKN2A	Del_8p23.1	0.632	1
GPC5	Del_13q14.2	0.632	1
RHOB	Del_8p23.1	0.632	1
TPTE	17p-Del	0.632	1
3p-Amp	Del_8p23.1	0.632	1
Amp_12p12.1	Del_13q14.2	0.632	1
Del_12p13.1	Del_13q14.2	0.632	1
KLF5	5p-Amp	0.633	1
KLF5	Del_19p13.3	0.633	1
FAT1	Del_9q33.2	0.633	1
Amp_1p34.2	Amp_12q15	0.633	1
Amp_1p34.2	Del_4q34.2	0.633	1
Amp_1p34.2	Del_8p23.1	0.633	1
Amp_13q22.1	Amp_20q11.21	0.633	1
Amp_17q11.2	Del_9q33.2	0.633	1
Del_6p25.3	Del_11p15.5	0.633	1
EP300	Amp_2p25.1	0.634	1
EP300	Amp_19q13.43	0.634	1
EP300	Del_6p25.3	0.634	1
20p-Amp	9q-Del	0.634	1
20p-Amp	Amp_3q26.33	0.634	1
20p-Amp	Del_11q23.3	0.634	1
20p-Amp	Del_11q25	0.634	1
5q-Del	Amp_3q26.33	0.634	1
5q-Del	Amp_7p21.1	0.634	1
5q-Del	Del_11q23.3	0.634	1
6q-Del	Amp_7p21.1	0.634	1
9q-Del	Del_22q13.32	0.634	1
Amp_2p25.1	Del_11q25	0.634	1
Amp_7p21.1	Del_22q13.32	0.634	1
Del_11q23.3	Del_22q13.32	0.634	1
ARID1A	Del_9p23	0.635	1
KDM6A	Amp_3p25.2	0.635	1
MLL2	TPTE	0.635	1
CREBBP	MLL	0.636	1
CREBBP	Del_2q34	0.636	1
CREBBP	Del_16p13.3	0.636	1
ERCC2	RB1	0.636	1
ERCC2	Amp_11q13.3	0.636	1
ERCC2	Del_2q34	0.636	1
FGFR3	Amp_11q13.3	0.636	1
FGFR3	Del_16p13.3	0.636	1
MLL	Del_4q34.2	0.636	1
MLL	Del_19p13.3	0.636	1
5p-Amp	Del_2q34	0.636	1
Amp_11q13.3	Amp_12q15	0.636	1
Amp_11q13.3	Del_19p13.3	0.636	1
Del_16p13.3	Del_19p13.3	0.636	1
ASXL2	ZFP36L1	0.637	1
ASXL2	Amp_11q22.2	0.637	1
BTG2	RBM26	0.637	1
BTG2	Amp_16p13.2	0.637	1
HRAS	RBM26	0.637	1
HRAS	22q-Del	0.637	1
HRAS	Amp_16p13.2	0.637	1
ZFP36L1	22q-Del	0.637	1
ZFP36L1	Amp_16p13.2	0.637	1
RBM26	Amp_4q13.3	0.637	1
22q-Del	Amp_4q13.3	0.637	1
22q-Del	Amp_11q22.2	0.637	1
Amp_4q13.3	Amp_16p13.2	0.637	1
Amp_11q22.2	Amp_16p13.2	0.637	1
Del_6p25.3	Del_8p23.1	0.637	1
11p-Del	Amp_10p14	0.639	1
9p-Del	Amp_10p14	0.639	1
ACRC	Del_8p23.1	0.64	1
RAD51C	Del_8p23.1	0.64	1
19q-Amp	Del_8p23.1	0.64	1
Amp_6q21	Del_8p23.1	0.64	1
Amp_20q11.21	Del_2q37.1	0.64	1
Del_1q32.1	Del_8p23.1	0.64	1
CDKN1A	Amp_6p22.3	0.641	1
CDKN1A	Amp_13q22.1	0.641	1
PIK3CA	Amp_8q22.3	0.641	1
FAT1	11q-Del	0.641	1
FAT1	Del_10q23.31	0.641	1
11q-Del	Amp_17q11.2	0.641	1
18q-Del	Amp_8p11.23	0.641	1
Amp_6p22.3	Amp_8p11.23	0.641	1
Amp_8p11.23	Amp_17q11.2	0.641	1
Amp_13q22.1	Del_3p14.2	0.641	1
Amp_16p13.2	Del_11p15.5	0.641	1
Amp_17q11.2	Del_10q23.31	0.641	1
ERCC2	Del_8p23.1	0.642	1
FGFR3	Del_8p23.1	0.642	1
BTG2	Del_9q33.2	0.644	1
PIK3CA	Amp_4q13.3	0.644	1
11p-Del	Amp_11p13	0.644	1
11p-Del	Del_7q36.3	0.644	1
8p-Del	Amp_11p13	0.644	1
9p-Del	Amp_11p13	0.644	1
9p-Del	Del_7q36.3	0.644	1
Amp_4q13.3	Del_9q33.2	0.644	1
Amp_10p14	Amp_11p13	0.644	1
Amp_11q22.2	Amp_20q11.21	0.644	1
CREBBP	Amp_7p11.2	0.645	1
ERCC2	Del_2q37.1	0.645	1
KDM6A	1q-Amp	0.645	1
KDM6A	16p-Del	0.645	1
KDM6A	Amp_16q22.1	0.645	1
ECM1	Amp_1q21.3	0.645	1
1q-Amp	Del_9p23	0.645	1
Amp_7p11.2	Del_4q34.2	0.645	1
Amp_7p11.2	Del_19p13.3	0.645	1
ARID1A	FBXW7	0.646	1
ARID1A	RXRA	0.646	1
ARID1A	7q-Amp	0.646	1
FBXW7	20p-Amp	0.646	1
FBXW7	6q-Del	0.646	1
FBXW7	Amp_2p25.1	0.646	1
FBXW7	Amp_3p25.2	0.646	1
FBXW7	Amp_19q13.43	0.646	1
FBXW7	Del_22q13.32	0.646	1
PHLDA3	20p-Amp	0.646	1
PHLDA3	5q-Del	0.646	1
PHLDA3	6q-Del	0.646	1
PHLDA3	Amp_2p25.1	0.646	1
PHLDA3	Amp_19q13.43	0.646	1
PHLDA3	Del_6p25.3	0.646	1
PHLDA3	Del_22q13.32	0.646	1
RXRA	Amp_3p25.2	0.646	1
ACRC	5q-Del	0.646	1
ACRC	6q-Del	0.646	1
ACRC	Amp_2p25.1	0.646	1
ACRC	Del_22q13.32	0.646	1
RAD51C	20p-Amp	0.646	1
RAD51C	Amp_2p25.1	0.646	1
RAD51C	Amp_19q13.43	0.646	1
19q-Amp	20p-Amp	0.646	1
20p-Amp	4p-Del	0.646	1
20p-Amp	Amp_6q21	0.646	1
20p-Amp	Amp_6q23.3	0.646	1
20p-Amp	Amp_17q12	0.646	1
20p-Amp	Amp_22q12.2	0.646	1
20p-Amp	Del_1q32.1	0.646	1
20p-Amp	Del_14q24.1	0.646	1
7q-Amp	5q-Del	0.646	1
7q-Amp	6q-Del	0.646	1
7q-Amp	Amp_3p25.2	0.646	1
7q-Amp	Amp_5p15.33	0.646	1
7q-Amp	Del_6p25.3	0.646	1
7q-Amp	Del_22q13.32	0.646	1
4p-Del	Amp_3p25.2	0.646	1
5q-Del	Amp_6q21	0.646	1
5q-Del	Amp_6q23.3	0.646	1
5q-Del	Amp_17q12	0.646	1
5q-Del	Amp_22q12.2	0.646	1
5q-Del	Del_Xq21.33	0.646	1
6q-Del	Amp_6q21	0.646	1
6q-Del	Del_1q32.1	0.646	1
Amp_2p25.1	Amp_6q21	0.646	1
Amp_2p25.1	Amp_6q23.3	0.646	1
Amp_6q21	Del_6p25.3	0.646	1
Amp_6q23.3	Amp_19q13.43	0.646	1
Amp_6q23.3	Del_22q13.32	0.646	1
Amp_19q13.43	Del_1q32.1	0.646	1
Del_1q32.1	Del_6p25.3	0.646	1
Del_6p25.3	Del_Xq21.33	0.646	1
Del_22q13.32	Del_Xq21.33	0.646	1
RB1	19p-Del	0.647	1
RB1	Del_Xp11.3	0.647	1
MLL	19p-Del	0.647	1
MLL	Del_Xp11.3	0.647	1
19p-Del	Amp_11q13.3	0.647	1
19p-Del	Del_2q34	0.647	1
19p-Del	Del_16p13.3	0.647	1
Del_2q34	Del_Xp11.3	0.647	1
KDM6A	Del_13q14.2	0.648	1
17p-Del	Amp_1q21.3	0.648	1
8p-Del	Del_13q14.2	0.649	1
CDKN2A	Amp_19q12	0.651	1
FOXA1	Amp_8q22.3	0.651	1
FOXA1	Amp_19q12	0.651	1
FOXQ1	Amp_19q12	0.651	1
FOXQ1	Del_18q23	0.651	1
RHOB	Amp_19q12	0.651	1
17q-Amp	Del_18q23	0.651	1
3p-Amp	Amp_19q12	0.651	1
14q-Del	Amp_8q22.3	0.651	1
ELF3	8q-Amp	0.652	1
ERBB3	7p-Amp	0.652	1
ERBB3	10q-Del	0.652	1
ERBB3	Del_2q22.1	0.652	1
ERBB3	Del_15q13.1	0.652	1
NFE2L2	SPTAN1	0.652	1
NFE2L2	STAG2	0.652	1
NFE2L2	8q-Amp	0.652	1
SPTAN1	Amp_4p16.3	0.652	1
STAG2	3q-Amp	0.652	1
STAG2	Del_4q22.1	0.652	1
STAG2	Del_15q13.1	0.652	1
7p-Amp	8q-Amp	0.652	1
7p-Amp	Del_16q23.1	0.652	1
8q-Amp	Del_4q22.1	0.652	1
Del_4q22.1	Del_16q23.1	0.652	1
PIK3CA	Del_17p12	0.653	1
ACRC	Amp_8q22.3	0.654	1
19q-Amp	Amp_8q22.3	0.654	1
Amp_8q22.3	Del_1q32.1	0.654	1
Amp_8q22.3	Del_Xq21.33	0.654	1
ASXL2	Del_16p13.3	0.655	1
MLL	RBM26	0.655	1
MLL	22q-Del	0.655	1
RBM26	Amp_11q13.3	0.655	1
RBM26	Del_2q34	0.655	1
4q-Del	Amp_8q22.3	0.655	1
Amp_1p34.2	Amp_8q22.3	0.655	1
ELF3	Del_2q37.1	0.656	1
NFE2L2	Del_2q37.1	0.656	1
TPTE	Del_17p12	0.656	1
3q-Amp	Del_2q37.1	0.656	1
7p-Amp	Del_2q37.1	0.656	1
Amp_4p16.3	Amp_7p11.2	0.656	1
Amp_4p16.3	Del_2q37.1	0.656	1
Amp_7p11.2	Del_2q22.1	0.656	1
Amp_7p11.2	Del_4q22.1	0.656	1
Amp_7p11.2	Del_15q13.1	0.656	1
Amp_17q12	Del_18q23	0.656	1
Amp_22q12.2	Del_18q23	0.656	1
Del_2q37.1	Del_4q22.1	0.656	1
CREBBP	KDM6A	0.657	1
ERCC2	Amp_1q21.3	0.657	1
FGFR3	Amp_1q21.3	0.657	1
KDM6A	5p-Amp	0.657	1
KDM6A	Amp_12q15	0.657	1
Amp_11p13	Del_2q37.1	0.657	1
EP300	11q-Del	0.658	1
EP300	Amp_8p11.23	0.658	1
EP300	Del_3p14.2	0.658	1
EP300	Del_6q27	0.658	1
Amp_3q26.33	Amp_8p11.23	0.658	1
Amp_3q26.33	Amp_17q23.3	0.658	1
Amp_7p21.1	Amp_8p11.23	0.658	1
Amp_7p21.1	Del_6q27	0.658	1
Amp_17q23.3	Del_11q25	0.658	1
CX3CL1	KLF5	0.659	1
CX3CL1	4q-Del	0.659	1
CX3CL1	Amp_1p34.2	0.659	1
CX3CL1	Amp_16p11.2	0.659	1
KLF5	16p-Del	0.659	1
KLF5	Amp_16q22.1	0.659	1
CEP192	4q-Del	0.659	1
CEP192	Amp_1p34.2	0.659	1
ECM1	Amp_16p11.2	0.659	1
1q-Amp	4q-Del	0.659	1
16p-Del	Amp_1p34.2	0.659	1
4q-Del	Amp_16q22.1	0.659	1
11p-Del	Del_8p23.1	0.66	1
CDKN1A	MLL2	0.662	1
CX3CL1	Del_11p15.5	0.662	1
MLL2	Del_6q27	0.662	1
MLL2	Del_10q23.31	0.662	1
CEP192	Del_11p15.5	0.662	1
BTG2	8p-Del	0.663	1
HRAS	8p-Del	0.663	1
ZFP36L1	11p-Del	0.663	1
ZFP36L1	9p-Del	0.663	1
8p-Del	Amp_4q13.3	0.663	1
9p-Del	Amp_11q22.2	0.663	1
Amp_4q13.3	Amp_10p14	0.663	1
Amp_10p14	Amp_11q22.2	0.663	1
20q-Amp	9p-Del	0.664	1
11p-Del	Amp_13q22.1	0.664	1
18q-Del	Amp_10p14	0.664	1
9p-Del	Amp_17q11.2	0.664	1
CREBBP	Del_Xp11.3	0.665	1
ERCC2	Del_Xp11.3	0.665	1
FGFR3	Del_Xp11.3	0.665	1
KLF5	FAT1	0.665	1
KLF5	18q-Del	0.665	1
KLF5	Amp_13q22.1	0.665	1
KLF5	Amp_17q11.2	0.665	1
FAT1	Amp_1p34.2	0.665	1
20p-Amp	Del_13q14.2	0.665	1
20q-Amp	Amp_1p34.2	0.665	1
20q-Amp	Amp_16p11.2	0.665	1
5p-Amp	19p-Del	0.665	1
17p-Del	Amp_2p25.1	0.665	1
17p-Del	Amp_19q13.43	0.665	1
19p-Del	Amp_12q15	0.665	1
4q-Del	Amp_17q11.2	0.665	1
5q-Del	Del_13q14.2	0.665	1
Del_4q34.2	Del_Xp11.3	0.665	1
Del_6p25.3	Del_13q14.2	0.665	1
Del_19p13.3	Del_Xp11.3	0.665	1
CDKN2A	FOXA1	0.666	1
CDKN2A	MIPOL1	0.666	1
CDKN2A	17q-Amp	0.666	1
CDKN2A	15q-Del	0.666	1
CDKN2A	Del_1p36.11	0.666	1
FOXA1	FOXQ1	0.666	1
FOXA1	MIPOL1	0.666	1
FOXA1	3p-Amp	0.666	1
FOXA1	14q-Del	0.666	1
FOXA1	15q-Del	0.666	1
FOXA1	Del_1p36.11	0.666	1
FOXQ1	3p-Amp	0.666	1
FOXQ1	14q-Del	0.666	1
FOXQ1	15q-Del	0.666	1
FOXQ1	Del_1p36.11	0.666	1
KLF5	PIK3CA	0.666	1
MIPOL1	RHOB	0.666	1
MIPOL1	3p-Amp	0.666	1
MIPOL1	14q-Del	0.666	1
MIPOL1	15q-Del	0.666	1
MIPOL1	Del_1p36.11	0.666	1
PIK3CA	Amp_1p34.2	0.666	1
RHOB	17q-Amp	0.666	1
RHOB	3p-Amp	0.666	1
RHOB	15q-Del	0.666	1
RHOB	Del_1p36.11	0.666	1
MLL	Amp_19q12	0.666	1
17q-Amp	3p-Amp	0.666	1
17q-Amp	Del_1p36.11	0.666	1
3p-Amp	14q-Del	0.666	1
3p-Amp	15q-Del	0.666	1
14q-Del	Del_1p36.11	0.666	1
4q-Del	Amp_20q11.21	0.666	1
Amp_11q13.3	Del_18q23	0.666	1
Amp_16p11.2	Del_9q33.2	0.666	1
Del_2q34	Del_18q23	0.666	1
MLL2	TSC1	0.667	1
MLL2	10q-Del	0.667	1
MLL2	Del_4q22.1	0.667	1
MLL2	Del_15q13.1	0.667	1
PIK3CA	Amp_6p22.3	0.667	1
HRAS	TP53	0.668	1
TP53	Amp_11q22.2	0.668	1
FBXW7	PHLDA3	0.669	1
FBXW7	ACRC	0.669	1
FBXW7	RAD51C	0.669	1
FBXW7	19q-Amp	0.669	1
FBXW7	Amp_6q21	0.669	1
FBXW7	Del_1q32.1	0.669	1
FBXW7	Del_Xq21.33	0.669	1
PHLDA3	RXRA	0.669	1
PHLDA3	4p-Del	0.669	1
PHLDA3	Amp_17q12	0.669	1
PHLDA3	Amp_22q12.2	0.669	1
PHLDA3	Del_14q24.1	0.669	1
RXRA	ACRC	0.669	1
RXRA	19q-Amp	0.669	1
RXRA	Amp_6q21	0.669	1
RXRA	Del_1q32.1	0.669	1
RXRA	Del_Xq21.33	0.669	1
ACRC	4p-Del	0.669	1
ACRC	Amp_17q12	0.669	1
RAD51C	4p-Del	0.669	1
RAD51C	Amp_17q12	0.669	1
RAD51C	Amp_22q12.2	0.669	1
19q-Amp	7q-Amp	0.669	1
19q-Amp	4p-Del	0.669	1
19q-Amp	Amp_22q12.2	0.669	1
7q-Amp	Amp_6q21	0.669	1
7q-Amp	Amp_6q23.3	0.669	1
7q-Amp	Del_1q32.1	0.669	1
4p-Del	Amp_6q21	0.669	1
4p-Del	Del_1q32.1	0.669	1
4p-Del	Del_Xq21.33	0.669	1
Amp_6q21	Amp_17q12	0.669	1
Amp_6q23.3	Amp_22q12.2	0.669	1
Amp_22q12.2	Del_1q32.1	0.669	1
Del_14q24.1	Del_Xq21.33	0.669	1
CREBBP	Amp_8q22.3	0.67	1
BTG2	GPC5	0.671	1
BTG2	TXNIP	0.671	1
BTG2	Amp_12p12.1	0.671	1
FBXW7	KDM6A	0.671	1
GPC5	ZFP36L1	0.671	1
HRAS	TXNIP	0.671	1
KDM6A	7q-Amp	0.671	1
KDM6A	Amp_22q12.2	0.671	1
KDM6A	Del_14q24.1	0.671	1
TPTE	ZFP36L1	0.671	1
TPTE	Amp_4q13.3	0.671	1
TPTE	Amp_11q22.2	0.671	1
TXNIP	Amp_11q22.2	0.671	1
ZFP36L1	Amp_9p24.1	0.671	1
ZFP36L1	Amp_12p12.1	0.671	1
ZFP36L1	Del_12p13.1	0.671	1
4p-Del	Del_9p23	0.671	1
Amp_4q13.3	Amp_9p24.1	0.671	1
Amp_4q13.3	Amp_12p12.1	0.671	1
Amp_22q12.2	Del_9p23	0.671	1
MLL2	Amp_5p15.33	0.672	1
CDKN2A	EP300	0.674	1
CDKN2A	Amp_7p21.1	0.674	1
CDKN2A	Del_5q12.1	0.674	1
EP300	RHOB	0.674	1
EP300	Del_1p36.11	0.674	1
FOXA1	Amp_3q26.33	0.674	1
FOXQ1	Amp_7p21.1	0.674	1
FOXQ1	Del_5q12.1	0.674	1
FOXQ1	Del_11q23.3	0.674	1
FOXQ1	Del_11q25	0.674	1
KDM6A	Del_8p23.1	0.674	1
MIPOL1	Amp_3q26.33	0.674	1
MIPOL1	Del_5q12.1	0.674	1
MIPOL1	Del_11q23.3	0.674	1
RHOB	Del_5q12.1	0.674	1
RHOB	Del_11q23.3	0.674	1
RHOB	Del_11q25	0.674	1
17q-Amp	9q-Del	0.674	1
17q-Amp	Amp_3q26.33	0.674	1
17q-Amp	Del_11q23.3	0.674	1
3p-Amp	9q-Del	0.674	1
15q-Del	9q-Del	0.674	1
15q-Del	Amp_3q26.33	0.674	1
15q-Del	Amp_7p21.1	0.674	1
9q-Del	Del_1p36.11	0.674	1
Amp_7p21.1	Del_1p36.11	0.674	1
CREBBP	FGFR3	0.675	1
CREBBP	5p-Amp	0.675	1
CREBBP	Del_4q34.2	0.675	1
ERCC2	Amp_12q15	0.675	1
ERCC2	Del_4q34.2	0.675	1
ERCC2	Del_19p13.3	0.675	1
Amp_12q15	Del_4q34.2	0.675	1
ARID1A	Amp_9p24.1	0.676	1
TXNIP	Amp_5p15.33	0.676	1
Amp_3p25.2	Amp_9p24.1	0.676	1
Amp_3p25.2	Del_12p13.1	0.676	1
RB1	20q-Amp	0.677	1
FAT1	MLL	0.677	1
FAT1	Del_2q34	0.677	1
MLL	Amp_17q11.2	0.677	1
Amp_13q22.1	Del_16p13.3	0.677	1
KDM6A	Amp_1q21.3	0.679	1
KDM6A	Del_9p23	0.679	1
Amp_1q21.3	Del_9p23	0.679	1
Amp_6p22.3	Del_11p15.5	0.679	1
ARID1A	Del_11p15.5	0.68	1
Amp_5p15.33	Del_11p15.5	0.68	1
Amp_11p13	Amp_19q12	0.682	1
Amp_11p13	Del_18q23	0.682	1
Del_7q36.3	Del_18q23	0.682	1
HRAS	Amp_7p11.2	0.683	1
HRAS	Del_2q37.1	0.683	1
ZFP36L1	Amp_7p11.2	0.683	1
ZFP36L1	Del_2q37.1	0.683	1
Amp_4q13.3	Amp_7p11.2	0.683	1
Amp_11q22.2	Del_2q37.1	0.683	1
ASXL2	CREBBP	0.684	1
ASXL2	ERCC2	0.684	1
CDKN1A	TPTE	0.684	1
CREBBP	22q-Del	0.684	1
ERCC2	RBM26	0.684	1
ERCC2	22q-Del	0.684	1
ERCC2	Amp_16p13.2	0.684	1
FBXW7	RXRA	0.684	1
FBXW7	Amp_17q12	0.684	1
FBXW7	Amp_22q12.2	0.684	1
FGFR3	22q-Del	0.684	1
GPC5	Amp_8p11.23	0.684	1
GPC5	Del_10q23.31	0.684	1
RXRA	7q-Amp	0.684	1
RXRA	Amp_17q12	0.684	1
RXRA	Amp_22q12.2	0.684	1
TPTE	Del_3p14.2	0.684	1
TXNIP	Amp_17q23.3	0.684	1
TXNIP	Del_6q27	0.684	1
TXNIP	Del_10q23.31	0.684	1
FAT1	19p-Del	0.684	1
FAT1	Del_Xp11.3	0.684	1
RBM26	Amp_12q15	0.684	1
20q-Amp	19p-Del	0.684	1
20q-Amp	Del_Xp11.3	0.684	1
7q-Amp	Amp_17q12	0.684	1
7q-Amp	Del_14q24.1	0.684	1
18q-Del	Del_Xp11.3	0.684	1
19p-Del	Amp_13q22.1	0.684	1
19p-Del	Amp_17q11.2	0.684	1
Amp_8p11.23	Del_12p13.1	0.684	1
Amp_9p24.1	Del_3p14.2	0.684	1
Amp_12p12.1	Del_3p14.2	0.684	1
Amp_12p12.1	Del_6q27	0.684	1
Amp_12p12.1	Del_10q23.31	0.684	1
Amp_12q15	Amp_16p13.2	0.684	1
Amp_13q22.1	Del_Xp11.3	0.684	1
Amp_16p13.2	Del_4q34.2	0.684	1
Amp_17q12	Del_14q24.1	0.684	1
Del_3p14.2	Del_12p13.1	0.684	1
Del_6q27	Del_12p13.1	0.684	1
Del_10q23.31	Del_12p13.1	0.684	1
CDKN1A	ERBB3	0.685	1
CDKN1A	SPTAN1	0.685	1
EP300	FBXW7	0.685	1
EP300	RXRA	0.685	1
ERBB3	Del_3p14.2	0.685	1
FBXW7	Amp_7p21.1	0.685	1
FBXW7	Del_11q23.3	0.685	1
STAG2	Amp_8p11.23	0.685	1
STAG2	Amp_17q23.3	0.685	1
STAG2	Del_6q27	0.685	1
STAG2	Del_10q23.31	0.685	1
7q-Amp	9q-Del	0.685	1
7q-Amp	Amp_3q26.33	0.685	1
7q-Amp	Del_5q12.1	0.685	1
8q-Amp	11q-Del	0.685	1
8q-Amp	Del_10q23.31	0.685	1
4p-Del	Amp_3q26.33	0.685	1
9q-Del	Amp_17q12	0.685	1
9q-Del	Amp_22q12.2	0.685	1
Amp_3q26.33	Amp_17q12	0.685	1
Amp_3q26.33	Del_14q24.1	0.685	1
Amp_7p21.1	Amp_17q12	0.685	1
Amp_8p11.23	Del_16q23.1	0.685	1
Amp_17q12	Del_11q23.3	0.685	1
Amp_22q12.2	Del_11q23.3	0.685	1
Del_11q23.3	Del_14q24.1	0.685	1
ASXL2	Amp_6p22.3	0.686	1
ELF3	5q-Del	0.687	1
ELF3	6q-Del	0.687	1
ELF3	Amp_2p25.1	0.687	1
ELF3	Del_6p25.3	0.687	1
ELF3	Del_22q13.32	0.687	1
ERBB3	Amp_20q11.21	0.687	1
ERBB3	Del_9q33.2	0.687	1
NFE2L2	20p-Amp	0.687	1
NFE2L2	6q-Del	0.687	1
NFE2L2	Del_22q13.32	0.687	1
PIK3CA	STAG2	0.687	1
TSC1	6q-Del	0.687	1
TSC1	Amp_19q13.43	0.687	1
TSC1	Del_22q13.32	0.687	1
20p-Amp	Del_4q22.1	0.687	1
7p-Amp	5q-Del	0.687	1
7p-Amp	Del_22q13.32	0.687	1
10q-Del	Amp_2p25.1	0.687	1
5q-Del	Amp_6p22.3	0.687	1
5q-Del	Del_2q22.1	0.687	1
6q-Del	Del_2q22.1	0.687	1
Amp_2p25.1	Del_4q22.1	0.687	1
Amp_2p25.1	Del_15q13.1	0.687	1
Amp_5p15.33	Amp_13q22.1	0.687	1
Amp_5p15.33	Amp_17q11.2	0.687	1
Amp_6p22.3	Del_6p25.3	0.687	1
Amp_19q13.43	Del_4q22.1	0.687	1
CX3CL1	RBM26	0.688	1
CX3CL1	22q-Del	0.688	1
CX3CL1	Amp_16p13.2	0.688	1
CEP192	RBM26	0.688	1
CEP192	Amp_16p13.2	0.688	1
ECM1	22q-Del	0.688	1
ECM1	Amp_16p13.2	0.688	1
RBM26	1q-Amp	0.688	1
RBM26	16p-Del	0.688	1
RBM26	Amp_16q22.1	0.688	1
Amp_16p13.2	Amp_16q22.1	0.688	1
KLF5	11p-Del	0.69	1
4q-Del	Amp_10p14	0.69	1
9p-Del	Amp_16p11.2	0.69	1
ELF3	Del_17p12	0.691	1
Amp_5p15.33	Amp_20q11.21	0.691	1
Amp_5p15.33	Del_9q33.2	0.691	1
ELF3	PHLDA3	0.693	1
ELF3	ACRC	0.693	1
ELF3	RAD51C	0.693	1
ELF3	19q-Amp	0.693	1
ELF3	Amp_6q21	0.693	1
ELF3	Del_Xq21.33	0.693	1
ERBB3	Del_9p21.3	0.693	1
NFE2L2	PHLDA3	0.693	1
NFE2L2	ACRC	0.693	1
NFE2L2	RAD51C	0.693	1
NFE2L2	19q-Amp	0.693	1
NFE2L2	Amp_6q21	0.693	1
NFE2L2	Amp_6q23.3	0.693	1
NFE2L2	Del_1q32.1	0.693	1
NFE2L2	Del_Xq21.33	0.693	1
PHLDA3	TSC1	0.693	1
PHLDA3	10q-Del	0.693	1
PHLDA3	Amp_4p16.3	0.693	1
PHLDA3	Del_15q13.1	0.693	1
TSC1	ACRC	0.693	1
TSC1	Amp_6q23.3	0.693	1
TSC1	Del_1q32.1	0.693	1
ACRC	Del_4q22.1	0.693	1
ACRC	Del_15q13.1	0.693	1
RAD51C	Amp_4p16.3	0.693	1
RAD51C	Del_2q22.1	0.693	1
RAD51C	Del_4q22.1	0.693	1
19q-Amp	3q-Amp	0.693	1
19q-Amp	7p-Amp	0.693	1
19q-Amp	10q-Del	0.693	1
19q-Amp	Del_4q22.1	0.693	1
19q-Amp	Del_15q13.1	0.693	1
3q-Amp	Amp_6q23.3	0.693	1
3q-Amp	Del_1q32.1	0.693	1
7p-Amp	Amp_6q21	0.693	1
7p-Amp	Amp_6q23.3	0.693	1
7p-Amp	Del_1q32.1	0.693	1
7p-Amp	Del_Xq21.33	0.693	1
8q-Amp	Del_9p21.3	0.693	1
10q-Del	Amp_6q21	0.693	1
10q-Del	Amp_6q23.3	0.693	1
10q-Del	Del_1q32.1	0.693	1
Amp_4p16.3	Amp_6q21	0.693	1
Amp_4p16.3	Amp_6q23.3	0.693	1
Amp_4p16.3	Del_Xq21.33	0.693	1
Amp_6p22.3	Amp_11q13.3	0.693	1
Amp_6q21	Del_2q22.1	0.693	1
Amp_6q23.3	Del_2q22.1	0.693	1
Amp_6q23.3	Del_15q13.1	0.693	1
Del_1q32.1	Del_2q22.1	0.693	1
Del_1q32.1	Del_4q22.1	0.693	1
Del_1q32.1	Del_15q13.1	0.693	1
Del_4q22.1	Del_Xq21.33	0.693	1
Del_9p21.3	Del_19p13.3	0.693	1
Del_15q13.1	Del_Xq21.33	0.693	1
RXRA	Del_9p21.3	0.694	1
4p-Del	Del_9p21.3	0.694	1
Amp_17q12	Del_9p21.3	0.694	1
Del_9p21.3	Del_14q24.1	0.694	1
CDKN1A	17p-Del	0.695	1
MLL2	STAG2	0.695	1
MLL2	Del_16q23.1	0.695	1
20q-Amp	Amp_7p11.2	0.695	1
17p-Del	Amp_17q23.3	0.695	1
Amp_7p11.2	Amp_17q11.2	0.695	1
Amp_8p11.23	Del_9p21.3	0.695	1
Amp_17q23.3	Del_9p21.3	0.695	1
CDKN2A	17p-Del	0.696	1
EP300	Amp_11p13	0.696	1
FOXA1	17p-Del	0.696	1
FOXQ1	17p-Del	0.696	1
KDM6A	Amp_9p24.1	0.696	1
MIPOL1	17p-Del	0.696	1
MIPOL1	Del_13q14.2	0.696	1
RHOB	Del_13q14.2	0.696	1
TP53	Amp_6q23.3	0.696	1
TP53	Del_1q32.1	0.696	1
CEP192	Amp_6p22.3	0.696	1
3p-Amp	17p-Del	0.696	1
3p-Amp	Del_13q14.2	0.696	1
7q-Amp	Del_11p15.5	0.696	1
14q-Del	Del_13q14.2	0.696	1
15q-Del	Del_13q14.2	0.696	1
17p-Del	Del_1p36.11	0.696	1
9q-Del	Amp_11p13	0.696	1
9q-Del	Del_7q36.3	0.696	1
Amp_1q21.3	Del_12p13.1	0.696	1
Amp_3q26.33	Amp_11p13	0.696	1
Amp_11p13	Del_5q12.1	0.696	1
Amp_11p13	Del_11q23.3	0.696	1
Amp_11p13	Del_11q25	0.696	1
Amp_16p11.2	Del_9p21.3	0.696	1
Del_5q12.1	Del_7q36.3	0.696	1
Del_7q36.3	Del_11q23.3	0.696	1
Del_7q36.3	Del_11q25	0.696	1
ERBB3	4q-Del	0.697	1
ERBB3	Amp_1p34.2	0.697	1
ERBB3	Amp_16p11.2	0.697	1
KLF5	STAG2	0.697	1
KLF5	Del_16q23.1	0.697	1
SPTAN1	4q-Del	0.697	1
SPTAN1	Amp_1p34.2	0.697	1
SPTAN1	Amp_16p11.2	0.697	1
STAG2	Amp_1p34.2	0.697	1
STAG2	Amp_16p11.2	0.697	1
TP53	Amp_7p21.1	0.697	1
TP53	Del_11q23.3	0.697	1
8q-Amp	Amp_1p34.2	0.697	1
22q-Del	Amp_1q23.3	0.7	1
EP300	RB1	0.701	1
EP300	Amp_6p22.3	0.701	1
EP300	Amp_11q13.3	0.701	1
GPC5	Del_9p21.3	0.701	1
RB1	Amp_7p21.1	0.701	1
RB1	Del_5q12.1	0.701	1
MLL	9q-Del	0.701	1
Amp_3q26.33	Del_16p13.3	0.701	1
Amp_6p22.3	Del_11q23.3	0.701	1
Amp_6p22.3	Del_11q25	0.701	1
Amp_11q13.3	Del_5q12.1	0.701	1
Del_2q37.1	Del_9p21.3	0.701	1
Del_9p21.3	Del_12p13.1	0.701	1
ERBB3	19p-Del	0.702	1
ERBB3	Del_Xp11.3	0.702	1
SPTAN1	19p-Del	0.702	1
SPTAN1	Del_Xp11.3	0.702	1
8q-Amp	19p-Del	0.702	1
8q-Amp	Del_Xp11.3	0.702	1
Del_16q23.1	Del_Xp11.3	0.702	1
Amp_5p15.33	Del_18q23	0.704	1
BTG2	FOXA1	0.707	1
BTG2	FOXQ1	0.707	1
BTG2	RHOB	0.707	1
BTG2	17q-Amp	0.707	1
BTG2	3p-Amp	0.707	1
CDKN2A	HRAS	0.707	1
CDKN2A	Amp_4q13.3	0.707	1
FOXA1	Amp_11q22.2	0.707	1
FOXQ1	HRAS	0.707	1
FOXQ1	ZFP36L1	0.707	1
FOXQ1	Amp_4q13.3	0.707	1
FOXQ1	Amp_11q22.2	0.707	1
HRAS	RHOB	0.707	1
HRAS	17q-Amp	0.707	1
HRAS	14q-Del	0.707	1
HRAS	15q-Del	0.707	1
HRAS	Del_1p36.11	0.707	1
MIPOL1	ZFP36L1	0.707	1
MIPOL1	Amp_4q13.3	0.707	1
MIPOL1	Amp_11q22.2	0.707	1
RHOB	ZFP36L1	0.707	1
RHOB	Amp_4q13.3	0.707	1
ZFP36L1	3p-Amp	0.707	1
ZFP36L1	14q-Del	0.707	1
ZFP36L1	15q-Del	0.707	1
ZFP36L1	Del_1p36.11	0.707	1
17q-Amp	Amp_11q22.2	0.707	1
3p-Amp	Amp_4q13.3	0.707	1
14q-Del	Amp_4q13.3	0.707	1
14q-Del	Amp_11q22.2	0.707	1
15q-Del	Amp_11q22.2	0.707	1
Amp_4q13.3	Del_1p36.11	0.707	1
Amp_8p11.23	Del_9q33.2	0.707	1
Del_6q27	Del_9q33.2	0.707	1
GPC5	RB1	0.709	1
GPC5	Amp_11q13.3	0.709	1
MLL2	19q-Amp	0.709	1
MLL2	Amp_6q23.3	0.709	1
MLL2	Del_Xq21.33	0.709	1
RB1	TPTE	0.709	1
RB1	Del_12p13.1	0.709	1
TPTE	Amp_11q13.3	0.709	1
TXNIP	MLL	0.709	1
TXNIP	Del_2q34	0.709	1
TXNIP	Del_16p13.3	0.709	1
TSC1	Amp_19q12	0.709	1
TSC1	Del_18q23	0.709	1
MLL	Amp_12p12.1	0.709	1
MLL	Del_12p13.1	0.709	1
7p-Amp	Del_18q23	0.709	1
10q-Del	Amp_19q12	0.709	1
17p-Del	Amp_11p13	0.709	1
17p-Del	Del_7q36.3	0.709	1
Amp_9p24.1	Amp_11q13.3	0.709	1
Amp_9p24.1	Del_16p13.3	0.709	1
Amp_11p13	Del_13q14.2	0.709	1
Amp_11q13.3	Amp_12p12.1	0.709	1
Amp_11q13.3	Del_12p13.1	0.709	1
Amp_12p12.1	Del_2q34	0.709	1
Amp_19q12	Del_4q22.1	0.709	1
Del_2q34	Del_12p13.1	0.709	1
Del_12p13.1	Del_16p13.3	0.709	1
CDKN1A	Del_8p23.1	0.71	1
Amp_13q22.1	Del_8p23.1	0.71	1
Del_3p14.2	Del_8p23.1	0.71	1
ERCC2	Amp_19q12	0.711	1
ZFP36L1	Del_9p21.3	0.711	1
5p-Amp	Amp_19q12	0.711	1
Amp_12q15	Amp_19q12	0.711	1
Amp_12q15	Del_18q23	0.711	1
ASXL2	Amp_13q22.1	0.712	1
FBXW7	Del_8p23.1	0.712	1
FAT1	RBM26	0.712	1
FAT1	22q-Del	0.712	1
RBM26	20q-Amp	0.712	1
RBM26	Amp_17q11.2	0.712	1
20q-Amp	Amp_16p13.2	0.712	1
7q-Amp	Del_8p23.1	0.712	1
9q-Del	Del_8p23.1	0.712	1
Amp_16p13.2	Amp_17q11.2	0.712	1
Amp_17q12	Del_8p23.1	0.712	1
ARID1A	7p-Amp	0.714	1
ARID1A	Del_17p12	0.714	1
CREBBP	FAT1	0.714	1
ERCC2	FAT1	0.714	1
ERCC2	Amp_17q11.2	0.714	1
FGFR3	Amp_17q11.2	0.714	1
TSC1	Amp_5p15.33	0.714	1
FAT1	Del_9p23	0.714	1
20q-Amp	Amp_1q21.3	0.714	1
20q-Amp	Del_4q34.2	0.714	1
7p-Amp	Amp_3p25.2	0.714	1
7q-Amp	Del_13q14.2	0.714	1
Amp_1q21.3	Amp_13q22.1	0.714	1
Amp_3p25.2	Del_2q22.1	0.714	1
Amp_5p15.33	Del_2q22.1	0.714	1
Amp_5p15.33	Del_4q22.1	0.714	1
Amp_17q11.2	Del_19p13.3	0.714	1
KLF5	Del_2q37.1	0.715	1
MLL2	Amp_7p11.2	0.715	1
Amp_1p34.2	Amp_7p11.2	0.715	1
SPTAN1	Amp_10p14	0.716	1
TPTE	Del_11p15.5	0.716	1
TXNIP	Del_11p15.5	0.716	1
8q-Amp	11p-Del	0.716	1
8q-Amp	9p-Del	0.716	1
11p-Del	Del_16q23.1	0.716	1
KLF5	PHLDA3	0.717	1
KLF5	ACRC	0.717	1
KLF5	RAD51C	0.717	1
KLF5	19q-Amp	0.717	1
KLF5	Amp_6q21	0.717	1
KLF5	Amp_6q23.3	0.717	1
KLF5	Del_1q32.1	0.717	1
PHLDA3	4q-Del	0.717	1
PHLDA3	Amp_16p11.2	0.717	1
ACRC	4q-Del	0.717	1
ACRC	Amp_1p34.2	0.717	1
ACRC	Amp_16p11.2	0.717	1
RAD51C	4q-Del	0.717	1
RAD51C	Amp_16p11.2	0.717	1
19q-Amp	4q-Del	0.717	1
19q-Amp	Amp_1p34.2	0.717	1
19q-Amp	Amp_16p11.2	0.717	1
4q-Del	Amp_6q21	0.717	1
4q-Del	Del_1q32.1	0.717	1
4q-Del	Del_Xq21.33	0.717	1
Amp_1p34.2	Amp_6q23.3	0.717	1
Amp_1p34.2	Del_1q32.1	0.717	1
Amp_1p34.2	Del_Xq21.33	0.717	1
Amp_6q21	Amp_16p11.2	0.717	1
Amp_6q23.3	Amp_16p11.2	0.717	1
Amp_16p11.2	Del_1q32.1	0.717	1
CX3CL1	TXNIP	0.718	1
CX3CL1	Amp_12p12.1	0.718	1
ERBB3	Del_16p13.3	0.718	1
GPC5	ECM1	0.718	1
GPC5	1q-Amp	0.718	1
GPC5	16p-Del	0.718	1
RB1	SPTAN1	0.718	1
SPTAN1	MLL	0.718	1
SPTAN1	Del_2q34	0.718	1
SPTAN1	Del_16p13.3	0.718	1
STAG2	Amp_11q13.3	0.718	1
STAG2	Del_16p13.3	0.718	1
TPTE	CEP192	0.718	1
TPTE	ECM1	0.718	1
TPTE	1q-Amp	0.718	1
TXNIP	CEP192	0.718	1
TXNIP	1q-Amp	0.718	1
TXNIP	Amp_16q22.1	0.718	1
CEP192	Amp_12p12.1	0.718	1
CEP192	Del_12p13.1	0.718	1
ECM1	Amp_9p24.1	0.718	1
ECM1	Amp_12p12.1	0.718	1
MLL	8q-Amp	0.718	1
MLL	Del_16q23.1	0.718	1
1q-Amp	Amp_9p24.1	0.718	1
8q-Amp	Del_2q34	0.718	1
8q-Amp	Del_16p13.3	0.718	1
16p-Del	Del_12p13.1	0.718	1
9q-Del	Del_18q23	0.718	1
Amp_9p24.1	Amp_16q22.1	0.718	1
Amp_11q13.3	Del_16q23.1	0.718	1
Amp_19q12	Del_5q12.1	0.718	1
MLL2	Del_2q34	0.719	1
TP53	Amp_13q22.1	0.719	1
RBM26	Del_8p23.1	0.719	1
Amp_1q23.3	Amp_4q13.3	0.719	1
Amp_1q23.3	Amp_11q22.2	0.719	1
ERBB3	Del_17p12	0.72	1
20p-Amp	19p-Del	0.721	1
20p-Amp	Del_Xp11.3	0.721	1
19p-Del	Amp_19q13.43	0.721	1
19p-Del	Del_6p25.3	0.721	1
5q-Del	Del_Xp11.3	0.721	1
6q-Del	Del_Xp11.3	0.721	1
Amp_2p25.1	Del_Xp11.3	0.721	1
Amp_7p21.1	Del_17p12	0.721	1
Amp_19q13.43	Del_Xp11.3	0.721	1
Del_6p25.3	Del_Xp11.3	0.721	1
ELF3	FBXW7	0.722	1
ELF3	RXRA	0.722	1
ELF3	7q-Amp	0.722	1
ELF3	4p-Del	0.722	1
ELF3	Del_14q24.1	0.722	1
FBXW7	3q-Amp	0.722	1
FBXW7	Del_15q13.1	0.722	1
FOXA1	MLL2	0.722	1
MLL2	15q-Del	0.722	1
NFE2L2	7q-Amp	0.722	1
NFE2L2	Amp_22q12.2	0.722	1
RXRA	TSC1	0.722	1
RXRA	3q-Amp	0.722	1
RXRA	7p-Amp	0.722	1
RXRA	Del_4q22.1	0.722	1
TSC1	Del_14q24.1	0.722	1
3q-Amp	7q-Amp	0.722	1
3q-Amp	Amp_17q12	0.722	1
3q-Amp	Amp_22q12.2	0.722	1
7p-Amp	Del_14q24.1	0.722	1
7q-Amp	10q-Del	0.722	1
7q-Amp	Amp_4p16.3	0.722	1
7q-Amp	Del_4q22.1	0.722	1
10q-Del	Amp_22q12.2	0.722	1
4p-Del	Del_2q22.1	0.722	1
Amp_3p25.2	Amp_17q23.3	0.722	1
Amp_3p25.2	Del_3p14.2	0.722	1
Amp_4p16.3	Amp_17q12	0.722	1
Amp_5p15.33	Amp_17q23.3	0.722	1
Amp_5p15.33	Del_3p14.2	0.722	1
Amp_5p15.33	Del_6q27	0.722	1
Amp_11q22.2	Del_18q23	0.722	1
Amp_17q12	Del_15q13.1	0.722	1
Amp_22q12.2	Del_4q22.1	0.722	1
Amp_22q12.2	Del_15q13.1	0.722	1
Del_2q22.1	Del_14q24.1	0.722	1
PHLDA3	Del_17p12	0.723	1
RAD51C	Del_17p12	0.723	1
CDKN1A	6q-Del	0.728	1
CDKN1A	Amp_2p25.1	0.728	1
KDM6A	Amp_20q11.21	0.728	1
KLF5	5q-Del	0.728	1
KLF5	Amp_2p25.1	0.728	1
KLF5	Del_22q13.32	0.728	1
20p-Amp	11q-Del	0.728	1
20p-Amp	Amp_16p11.2	0.728	1
20p-Amp	Amp_17q23.3	0.728	1
11q-Del	Amp_2p25.1	0.728	1
11q-Del	Amp_19q13.43	0.728	1
4q-Del	Amp_19q13.43	0.728	1
4q-Del	Del_22q13.32	0.728	1
6q-Del	Amp_17q23.3	0.728	1
Amp_1p34.2	Amp_19q13.43	0.728	1
Amp_1q21.3	Amp_20q11.21	0.728	1
Amp_2p25.1	Amp_16p11.2	0.728	1
Amp_8p11.23	Del_22q13.32	0.728	1
Amp_16p11.2	Del_6p25.3	0.728	1
Amp_17q23.3	Del_22q13.32	0.728	1
CX3CL1	PIK3CA	0.729	1
CX3CL1	Amp_20q11.21	0.729	1
CX3CL1	Del_9q33.2	0.729	1
PIK3CA	ECM1	0.729	1
CEP192	Del_9q33.2	0.729	1
ECM1	Del_9q33.2	0.729	1
1q-Amp	Amp_20q11.21	0.729	1
Amp_16q22.1	Del_9q33.2	0.729	1
PIK3CA	RBM26	0.73	1
TP53	20p-Amp	0.73	1
TP53	Amp_2p25.1	0.73	1
TP53	Amp_19q13.43	0.73	1
RBM26	Del_9q33.2	0.73	1
22q-Del	Del_9q33.2	0.73	1
Amp_16p13.2	Del_9q33.2	0.73	1
RAD51C	Del_9p21.3	0.731	1
Amp_6q21	Del_9p21.3	0.731	1
FBXW7	Amp_8q22.3	0.734	1
CREBBP	GPC5	0.735	1
CREBBP	TPTE	0.735	1
CREBBP	TXNIP	0.735	1
CREBBP	Amp_12p12.1	0.735	1
CREBBP	Del_12p13.1	0.735	1
ERCC2	Del_12p13.1	0.735	1
FGFR3	GPC5	0.735	1
FGFR3	TPTE	0.735	1
GPC5	Amp_12q15	0.735	1
GPC5	Del_4q34.2	0.735	1
RB1	17p-Del	0.735	1
TXNIP	Amp_12q15	0.735	1
TXNIP	Del_19p13.3	0.735	1
MLL	Del_13q14.2	0.735	1
Amp_4q13.3	Del_8p23.1	0.735	1
Amp_9p24.1	Del_19p13.3	0.735	1
Amp_12q15	Del_12p13.1	0.735	1
CDKN1A	Amp_11p13	0.736	1
CDKN1A	Del_7q36.3	0.736	1
ELF3	EP300	0.736	1
ELF3	Amp_1q21.3	0.736	1
EP300	TSC1	0.736	1
EP300	3q-Amp	0.736	1
EP300	Del_15q13.1	0.736	1
KDM6A	7p-Amp	0.736	1
KDM6A	10q-Del	0.736	1
KDM6A	Del_15q13.1	0.736	1
NFE2L2	Del_9p23	0.736	1
TSC1	Amp_1q21.3	0.736	1
TSC1	Del_5q12.1	0.736	1
3q-Amp	9q-Del	0.736	1
10q-Del	Amp_3q26.33	0.736	1
10q-Del	Amp_7p21.1	0.736	1
11q-Del	Amp_11p13	0.736	1
11q-Del	Del_7q36.3	0.736	1
9p-Del	Amp_5p15.33	0.736	1
9q-Del	Del_15q13.1	0.736	1
Amp_1q21.3	Del_2q22.1	0.736	1
Amp_1q21.3	Del_4q22.1	0.736	1
Amp_3q26.33	Amp_4p16.3	0.736	1
Amp_3q26.33	Del_15q13.1	0.736	1
Amp_5p15.33	Amp_10p14	0.736	1
Amp_8p11.23	Amp_11p13	0.736	1
Amp_11p13	Amp_17q23.3	0.736	1
Amp_11p13	Del_3p14.2	0.736	1
Amp_11p13	Del_6q27	0.736	1
Amp_11p13	Del_10q23.31	0.736	1
Amp_17q23.3	Del_7q36.3	0.736	1
Del_2q22.1	Del_5q12.1	0.736	1
Del_7q36.3	Del_10q23.31	0.736	1
Del_11q23.3	Del_15q13.1	0.736	1
Del_11q25	Del_15q13.1	0.736	1
ARID1A	RAD51C	0.737	1
ARID1A	Amp_1q23.3	0.737	1
ARID1A	Amp_6q23.3	0.737	1
ASXL2	Amp_8q22.3	0.737	1
PHLDA3	Amp_3p25.2	0.737	1
RAD51C	Amp_5p15.33	0.737	1
19q-Amp	Amp_3p25.2	0.737	1
22q-Del	Amp_8q22.3	0.737	1
Amp_1q21.3	Del_18q23	0.737	1
Amp_3p25.2	Del_1q32.1	0.737	1
Amp_3p25.2	Del_Xq21.33	0.737	1
Amp_5p15.33	Del_1q32.1	0.737	1
Amp_8q22.3	Del_3p14.2	0.737	1
Amp_8q22.3	Del_6q27	0.737	1
Amp_19q12	Del_9p23	0.737	1
MLL2	Amp_1p34.2	0.739	1
11q-Del	Amp_10p14	0.739	1
8p-Del	Amp_17q23.3	0.739	1
9p-Del	Amp_8p11.23	0.739	1
CDKN2A	Del_17p12	0.74	1
FOXA1	Del_17p12	0.74	1
FOXQ1	Del_17p12	0.74	1
MIPOL1	Del_17p12	0.74	1
PIK3CA	20p-Amp	0.74	1
PIK3CA	5q-Del	0.74	1
Amp_2p25.1	Amp_20q11.21	0.74	1
ASXL2	8q-Amp	0.741	1
CDKN1A	CDKN2A	0.741	1
CDKN1A	FOXA1	0.741	1
CDKN1A	FOXQ1	0.741	1
CDKN1A	MIPOL1	0.741	1
CDKN1A	3p-Amp	0.741	1
CDKN1A	14q-Del	0.741	1
CDKN1A	15q-Del	0.741	1
CDKN2A	Amp_8p11.23	0.741	1
ERBB3	RBM26	0.741	1
FBXW7	19p-Del	0.741	1
FBXW7	Del_Xp11.3	0.741	1
FOXA1	Amp_17q23.3	0.741	1
FOXA1	Del_10q23.31	0.741	1
MIPOL1	Amp_8p11.23	0.741	1
RHOB	Del_3p14.2	0.741	1
RXRA	19p-Del	0.741	1
RXRA	Del_Xp11.3	0.741	1
STAG2	22q-Del	0.741	1
STAG2	Amp_16p13.2	0.741	1
17q-Amp	11q-Del	0.741	1
3p-Amp	Amp_17q23.3	0.741	1
7q-Amp	19p-Del	0.741	1
7q-Amp	Del_Xp11.3	0.741	1
8q-Amp	22q-Del	0.741	1
14q-Del	Amp_8p11.23	0.741	1
15q-Del	Amp_17q23.3	0.741	1
19p-Del	Amp_17q12	0.741	1
19p-Del	Amp_22q12.2	0.741	1
19p-Del	Del_14q24.1	0.741	1
4p-Del	Del_Xp11.3	0.741	1
Amp_8p11.23	Del_1p36.11	0.741	1
Amp_13q22.1	Del_11p15.5	0.741	1
Amp_17q23.3	Del_1p36.11	0.741	1
Amp_22q12.2	Del_Xp11.3	0.741	1
Del_1p36.11	Del_6q27	0.741	1
Del_14q24.1	Del_Xp11.3	0.741	1
BTG2	Del_5q12.1	0.742	1
HRAS	Amp_3q26.33	0.742	1
HRAS	Amp_7p21.1	0.742	1
HRAS	Del_11q23.3	0.742	1
9q-Del	Amp_4q13.3	0.742	1
Amp_3q26.33	Amp_11q22.2	0.742	1
Amp_4q13.3	Del_5q12.1	0.742	1
Amp_7p21.1	Amp_11q22.2	0.742	1
ASXL2	PHLDA3	0.743	1
ASXL2	ACRC	0.743	1
ASXL2	RAD51C	0.743	1
ASXL2	19q-Amp	0.743	1
ASXL2	Amp_6q21	0.743	1
ASXL2	Amp_6q23.3	0.743	1
ASXL2	Del_Xq21.33	0.743	1
BTG2	Amp_4q13.3	0.743	1
BTG2	Amp_11q22.2	0.743	1
CREBBP	Amp_3q26.33	0.743	1
CREBBP	Amp_6p22.3	0.743	1
CREBBP	Del_5q12.1	0.743	1
EP300	FGFR3	0.743	1
ERCC2	Amp_6p22.3	0.743	1
ERCC2	Del_11q23.3	0.743	1
HRAS	ZFP36L1	0.743	1
HRAS	Amp_4q13.3	0.743	1
HRAS	Amp_11q22.2	0.743	1
PHLDA3	22q-Del	0.743	1
PHLDA3	Amp_16p13.2	0.743	1
ZFP36L1	Amp_11q22.2	0.743	1
ACRC	RBM26	0.743	1
ACRC	22q-Del	0.743	1
ACRC	Amp_16p13.2	0.743	1
RAD51C	RBM26	0.743	1
RAD51C	Amp_16p13.2	0.743	1
RBM26	Amp_6q21	0.743	1
RBM26	Amp_6q23.3	0.743	1
RBM26	Del_1q32.1	0.743	1
RBM26	Del_Xq21.33	0.743	1
19q-Amp	Amp_16p13.2	0.743	1
5p-Amp	9q-Del	0.743	1
5p-Amp	Del_5q12.1	0.743	1
8q-Amp	Del_2q37.1	0.743	1
22q-Del	Amp_6q21	0.743	1
22q-Del	Amp_6q23.3	0.743	1
9q-Del	Del_19p13.3	0.743	1
Amp_3q26.33	Del_19p13.3	0.743	1
Amp_4q13.3	Amp_11q22.2	0.743	1
Amp_6p22.3	Del_19p13.3	0.743	1
Amp_6q21	Amp_16p13.2	0.743	1
Amp_7p21.1	Amp_12q15	0.743	1
Amp_7p21.1	Del_4q34.2	0.743	1
Amp_16p13.2	Del_1q32.1	0.743	1
TP53	3q-Amp	0.744	1
TP53	Del_2q22.1	0.744	1
MLL	Amp_1q23.3	0.744	1
ARID1A	SPTAN1	0.745	1
PIK3CA	Amp_20q11.21	0.745	1
RXRA	Amp_6p22.3	0.745	1
Amp_3p25.2	Del_16q23.1	0.745	1
CX3CL1	11p-Del	0.746	1
CX3CL1	Amp_10p14	0.746	1
CEP192	11p-Del	0.746	1
CEP192	Amp_10p14	0.746	1
MLL	Del_17p12	0.746	1
1q-Amp	11p-Del	0.746	1
1q-Amp	9p-Del	0.746	1
8p-Del	Amp_16q22.1	0.746	1
9p-Del	Amp_16q22.1	0.746	1
ARID1A	TP53	0.747	1
TP53	Amp_5p15.33	0.747	1
RB1	Amp_11p13	0.749	1
RB1	Del_7q36.3	0.749	1
FAT1	Amp_17q11.2	0.749	1
MLL	Amp_11p13	0.749	1
MLL	Del_7q36.3	0.749	1
20q-Amp	Amp_17q11.2	0.749	1
18q-Del	Amp_13q22.1	0.749	1
Amp_11p13	Amp_11q13.3	0.749	1
Amp_11p13	Del_2q34	0.749	1
Amp_11p13	Del_16p13.3	0.749	1
Amp_11q13.3	Del_7q36.3	0.749	1
Amp_13q22.1	Amp_17q11.2	0.749	1
BTG2	Amp_8q22.3	0.75	1
CDKN1A	Amp_1q21.3	0.75	1
CDKN2A	CX3CL1	0.75	1
CDKN2A	ECM1	0.75	1
CDKN2A	1q-Amp	0.75	1
CDKN2A	16p-Del	0.75	1
CX3CL1	FOXA1	0.75	1
CX3CL1	FOXQ1	0.75	1
CX3CL1	17q-Amp	0.75	1
CX3CL1	3p-Amp	0.75	1
CX3CL1	14q-Del	0.75	1
CX3CL1	15q-Del	0.75	1
FOXA1	ECM1	0.75	1
FOXA1	Amp_16q22.1	0.75	1
FOXQ1	16p-Del	0.75	1
FOXQ1	Amp_16q22.1	0.75	1
HRAS	Amp_8q22.3	0.75	1
KDM6A	PHLDA3	0.75	1
KDM6A	ACRC	0.75	1
KDM6A	Del_6q27	0.75	1
KDM6A	Del_Xq21.33	0.75	1
MIPOL1	ECM1	0.75	1
MIPOL1	1q-Amp	0.75	1
MIPOL1	16p-Del	0.75	1
MIPOL1	Amp_16q22.1	0.75	1
PHLDA3	Del_9p23	0.75	1
RHOB	ECM1	0.75	1
RHOB	1q-Amp	0.75	1
RHOB	16p-Del	0.75	1
RHOB	Amp_16q22.1	0.75	1
ACRC	Amp_1q21.3	0.75	1
ACRC	Del_9p23	0.75	1
CEP192	3p-Amp	0.75	1
CEP192	Del_1p36.11	0.75	1
ECM1	3p-Amp	0.75	1
ECM1	14q-Del	0.75	1
ECM1	15q-Del	0.75	1
ECM1	Del_1p36.11	0.75	1
17q-Amp	Amp_16q22.1	0.75	1
19q-Amp	Del_9p23	0.75	1
1q-Amp	3p-Amp	0.75	1
1q-Amp	14q-Del	0.75	1
1q-Amp	15q-Del	0.75	1
1q-Amp	Del_1p36.11	0.75	1
3p-Amp	16p-Del	0.75	1
15q-Del	Amp_16q22.1	0.75	1
Amp_1q21.3	Del_1q32.1	0.75	1
Amp_4q13.3	Amp_8q22.3	0.75	1
Amp_6q21	Del_9p23	0.75	1
Amp_16q22.1	Del_1p36.11	0.75	1
ASXL2	Amp_10p14	0.751	1
RBM26	9p-Del	0.751	1
Amp_6p22.3	Del_2q37.1	0.751	1
CREBBP	Del_16q23.1	0.752	1
EP300	Amp_3p25.2	0.752	1
ERBB3	ERCC2	0.752	1
ERBB3	Amp_12q15	0.752	1
ERCC2	Del_16q23.1	0.752	1
STAG2	Amp_12q15	0.752	1
STAG2	Del_4q34.2	0.752	1
5p-Amp	8q-Amp	0.752	1
5p-Amp	Del_16q23.1	0.752	1
8q-Amp	Amp_1q23.3	0.752	1
9q-Del	Amp_5p15.33	0.752	1
Amp_3p25.2	Del_11q23.3	0.752	1
Amp_3p25.2	Del_11q25	0.752	1
Amp_5p15.33	Del_11q25	0.752	1
Amp_12q15	Del_16q23.1	0.752	1
RB1	Amp_20q11.21	0.753	1
Amp_11q13.3	Amp_20q11.21	0.753	1
Del_2q34	Del_9q33.2	0.753	1
Del_9q33.2	Del_16p13.3	0.753	1
ARID1A	Amp_5p15.33	0.754	1
EP300	Del_5q12.1	0.754	1
EP300	Del_11q25	0.754	1
Amp_3p25.2	Amp_5p15.33	0.754	1
Amp_7p21.1	Del_5q12.1	0.754	1
GPC5	Amp_6p22.3	0.755	1
TPTE	Amp_6p22.3	0.755	1
20q-Amp	Amp_19q12	0.755	1
20q-Amp	Del_18q23	0.755	1
18q-Del	Amp_19q12	0.755	1
Amp_6p22.3	Amp_12p12.1	0.755	1
TP53	Del_7q36.3	0.756	1
ARID1A	FOXA1	0.757	1
ARID1A	FOXQ1	0.757	1
ARID1A	RHOB	0.757	1
ARID1A	3p-Amp	0.757	1
ARID1A	14q-Del	0.757	1
ARID1A	15q-Del	0.757	1
ARID1A	Del_1p36.11	0.757	1
CDKN2A	Amp_5p15.33	0.757	1
ELF3	NFE2L2	0.757	1
ELF3	3q-Amp	0.757	1
ELF3	7p-Amp	0.757	1
ELF3	10q-Del	0.757	1
FOXQ1	Amp_5p15.33	0.757	1
MLL2	20p-Amp	0.757	1
MLL2	Amp_19q13.43	0.757	1
MLL2	Del_6p25.3	0.757	1
NFE2L2	TSC1	0.757	1
NFE2L2	7p-Amp	0.757	1
NFE2L2	Del_15q13.1	0.757	1
RHOB	Amp_3p25.2	0.757	1
TSC1	Del_2q22.1	0.757	1
TSC1	Del_15q13.1	0.757	1
17q-Amp	Amp_3p25.2	0.757	1
3q-Amp	10q-Del	0.757	1
3q-Amp	Amp_4p16.3	0.757	1
3q-Amp	Del_4q22.1	0.757	1
3q-Amp	Del_15q13.1	0.757	1
7p-Amp	10q-Del	0.757	1
7p-Amp	Amp_4p16.3	0.757	1
7p-Amp	Del_4q22.1	0.757	1
10q-Del	Del_2q22.1	0.757	1
14q-Del	Amp_3p25.2	0.757	1
15q-Del	Amp_3p25.2	0.757	1
Amp_3p25.2	Del_1p36.11	0.757	1
Del_4q22.1	Del_15q13.1	0.757	1
TSC1	Del_11p15.5	0.758	1
Del_2q22.1	Del_11p15.5	0.758	1
RB1	20p-Amp	0.759	1
RB1	6q-Del	0.759	1
RB1	Del_6p25.3	0.759	1
MLL	Del_6p25.3	0.759	1
20p-Amp	Amp_11q13.3	0.759	1
5q-Del	Del_2q34	0.759	1
Amp_1p34.2	Del_17p12	0.759	1
Amp_2p25.1	Del_2q34	0.759	1
Amp_11q13.3	Del_22q13.32	0.759	1
ELF3	Del_Xp11.3	0.76	1
FBXW7	KLF5	0.76	1
GPC5	FAT1	0.76	1
GPC5	20q-Amp	0.76	1
GPC5	Amp_17q11.2	0.76	1
KLF5	7q-Amp	0.76	1
KLF5	4p-Del	0.76	1
KLF5	Amp_17q12	0.76	1
KLF5	Amp_22q12.2	0.76	1
NFE2L2	Del_Xp11.3	0.76	1
RXRA	Amp_1p34.2	0.76	1
TPTE	Amp_17q11.2	0.76	1
TXNIP	20q-Amp	0.76	1
TXNIP	Amp_13q22.1	0.76	1
FAT1	Del_12p13.1	0.76	1
20q-Amp	Del_12p13.1	0.76	1
3q-Amp	Del_Xp11.3	0.76	1
7p-Amp	19p-Del	0.76	1
7p-Amp	Del_Xp11.3	0.76	1
10q-Del	Del_Xp11.3	0.76	1
19p-Del	Amp_4p16.3	0.76	1
19p-Del	Del_2q22.1	0.76	1
19p-Del	Del_15q13.1	0.76	1
Amp_1p34.2	Amp_17q12	0.76	1
Amp_1p34.2	Amp_22q12.2	0.76	1
Amp_1p34.2	Del_14q24.1	0.76	1
Amp_12p12.1	Amp_13q22.1	0.76	1
Amp_16p11.2	Amp_17q12	0.76	1
Del_4q22.1	Del_Xp11.3	0.76	1
Del_15q13.1	Del_Xp11.3	0.76	1
BTG2	17p-Del	0.761	1
BTG2	Del_13q14.2	0.761	1
HRAS	17p-Del	0.761	1
ZFP36L1	Del_13q14.2	0.761	1
11p-Del	Amp_19q12	0.761	1
8p-Del	Amp_19q12	0.761	1
Amp_4q13.3	Del_13q14.2	0.761	1
Amp_10p14	Del_18q23	0.761	1
ASXL2	TP53	0.762	1
NFE2L2	17p-Del	0.762	1
NFE2L2	Del_13q14.2	0.762	1
TSC1	Del_13q14.2	0.762	1
CEP192	Amp_7p11.2	0.762	1
CEP192	Del_2q37.1	0.762	1
1q-Amp	Amp_7p11.2	0.762	1
16p-Del	Amp_7p11.2	0.762	1
16p-Del	Del_2q37.1	0.762	1
Amp_1p34.2	Amp_19q12	0.762	1
Amp_7p11.2	Amp_16q22.1	0.762	1
CREBBP	Amp_11p13	0.763	1
ERCC2	Amp_11p13	0.763	1
ERCC2	Del_7q36.3	0.763	1
FGFR3	Amp_11p13	0.763	1
FGFR3	Del_7q36.3	0.763	1
ACRC	Del_11p15.5	0.763	1
RAD51C	Del_11p15.5	0.763	1
5p-Amp	Amp_11p13	0.763	1
5p-Amp	Del_7q36.3	0.763	1
Amp_6q21	Del_11p15.5	0.763	1
Amp_6q23.3	Del_11p15.5	0.763	1
Amp_11p13	Amp_12q15	0.763	1
Amp_11p13	Del_4q34.2	0.763	1
Amp_11p13	Del_19p13.3	0.763	1
Del_7q36.3	Del_19p13.3	0.763	1
CDKN2A	RB1	0.764	1
CDKN2A	Del_2q34	0.764	1
ELF3	Amp_1q23.3	0.764	1
FOXA1	RB1	0.764	1
FOXA1	MLL	0.764	1
FOXA1	Amp_11q13.3	0.764	1
FOXA1	Del_16p13.3	0.764	1
FOXQ1	RB1	0.764	1
FOXQ1	Amp_11q13.3	0.764	1
MIPOL1	MLL	0.764	1
MIPOL1	Del_2q34	0.764	1
RB1	3p-Amp	0.764	1
RB1	14q-Del	0.764	1
RB1	15q-Del	0.764	1
RHOB	Amp_11q13.3	0.764	1
RHOB	Del_2q34	0.764	1
MLL	17q-Amp	0.764	1
MLL	3p-Amp	0.764	1
MLL	14q-Del	0.764	1
15q-Del	Del_2q34	0.764	1
Amp_11q13.3	Del_1p36.11	0.764	1
Del_1p36.11	Del_16p13.3	0.764	1
TP53	Del_2q37.1	0.765	1
11p-Del	Del_22q13.32	0.765	1
8p-Del	Amp_2p25.1	0.765	1
8p-Del	Del_6p25.3	0.765	1
9p-Del	Del_6p25.3	0.765	1
CDKN1A	Amp_8p11.23	0.766	1
CDKN1A	Del_3p14.2	0.766	1
Amp_8p11.23	Del_10q23.31	0.766	1
Amp_8q22.3	Del_17p12	0.766	1
Amp_17q23.3	Del_3p14.2	0.766	1
EP300	PIK3CA	0.767	1
PIK3CA	Amp_3q26.33	0.767	1
PIK3CA	Del_11q23.3	0.767	1
17p-Del	Del_8p23.1	0.767	1
19p-Del	Amp_1q23.3	0.767	1
Amp_1q23.3	Del_Xp11.3	0.767	1
Del_8p23.1	Del_13q14.2	0.767	1
GPC5	ACRC	0.768	1
GPC5	Amp_6q21	0.768	1
GPC5	Amp_6q23.3	0.768	1
GPC5	Del_1q32.1	0.768	1
GPC5	Del_Xq21.33	0.768	1
PHLDA3	TPTE	0.768	1
PHLDA3	TXNIP	0.768	1
PHLDA3	Amp_9p24.1	0.768	1
PHLDA3	Amp_12p12.1	0.768	1
PHLDA3	Del_12p13.1	0.768	1
TPTE	Amp_6q21	0.768	1
TPTE	Amp_6q23.3	0.768	1
TPTE	Del_Xq21.33	0.768	1
TXNIP	ACRC	0.768	1
TXNIP	RAD51C	0.768	1
TXNIP	19q-Amp	0.768	1
TXNIP	Amp_6q21	0.768	1
TXNIP	Del_Xq21.33	0.768	1
ACRC	Amp_9p24.1	0.768	1
ACRC	Amp_12p12.1	0.768	1
ACRC	Del_12p13.1	0.768	1
RAD51C	Amp_12p12.1	0.768	1
RAD51C	Del_12p13.1	0.768	1
19q-Amp	Amp_9p24.1	0.768	1
19q-Amp	Amp_12p12.1	0.768	1
19q-Amp	Del_12p13.1	0.768	1
Amp_6q21	Amp_12p12.1	0.768	1
Amp_6q21	Del_12p13.1	0.768	1
Amp_6q23.3	Amp_9p24.1	0.768	1
Amp_6q23.3	Del_12p13.1	0.768	1
Amp_9p24.1	Del_1q32.1	0.768	1
Amp_9p24.1	Del_Xq21.33	0.768	1
Amp_12p12.1	Del_1q32.1	0.768	1
Del_12p13.1	Del_Xq21.33	0.768	1
ASXL2	6q-Del	0.769	1
STAG2	Amp_1q21.3	0.769	1
STAG2	Del_9p23	0.769	1
RBM26	20p-Amp	0.769	1
RBM26	Amp_2p25.1	0.769	1
RBM26	Del_22q13.32	0.769	1
20p-Amp	Amp_16p13.2	0.769	1
8q-Amp	Del_9p23	0.769	1
22q-Del	Amp_19q13.43	0.769	1
22q-Del	Del_6p25.3	0.769	1
5q-Del	Amp_16p13.2	0.769	1
Amp_2p25.1	Amp_16p13.2	0.769	1
Amp_16p13.2	Del_6p25.3	0.769	1
Amp_16p13.2	Del_22q13.32	0.769	1
CDKN1A	FBXW7	0.77	1
CDKN1A	4p-Del	0.77	1
CDKN1A	Amp_22q12.2	0.77	1
CDKN1A	Del_2q37.1	0.77	1
CDKN1A	Del_14q24.1	0.77	1
KDM6A	9p-Del	0.77	1
RXRA	11q-Del	0.77	1
RXRA	Del_3p14.2	0.77	1
7q-Amp	11q-Del	0.77	1
7q-Amp	Amp_17q23.3	0.77	1
7q-Amp	Del_3p14.2	0.77	1
7q-Amp	Del_10q23.31	0.77	1
11q-Del	Amp_17q12	0.77	1
11q-Del	Amp_22q12.2	0.77	1
Amp_7p11.2	Amp_8p11.23	0.77	1
Amp_7p11.2	Amp_17q23.3	0.77	1
Amp_7p11.2	Del_10q23.31	0.77	1
Del_13q14.2	Del_17p12	0.77	1
ARID1A	Del_2q34	0.772	1
ASXL2	Amp_7p11.2	0.772	1
MLL	Amp_3p25.2	0.772	1
22q-Del	Amp_7p11.2	0.772	1
Amp_5p15.33	Del_16p13.3	0.772	1
Amp_7p11.2	Amp_16p13.2	0.772	1
CDKN2A	KDM6A	0.773	1
CDKN2A	Del_9p23	0.773	1
FOXA1	Amp_1q21.3	0.773	1
KDM6A	3p-Amp	0.773	1
KDM6A	14q-Del	0.773	1
KDM6A	15q-Del	0.773	1
KDM6A	Del_1p36.11	0.773	1
MIPOL1	Amp_1q21.3	0.773	1
MIPOL1	Del_9p23	0.773	1
17q-Amp	Del_9p23	0.773	1
3p-Amp	Del_9p23	0.773	1
15q-Del	Del_9p23	0.773	1
Del_1p36.11	Del_9p23	0.773	1
ERBB3	Del_8p23.1	0.774	1
SPTAN1	Del_8p23.1	0.774	1
8q-Amp	Del_8p23.1	0.774	1
FAT1	Amp_11p13	0.777	1
FAT1	Del_7q36.3	0.777	1
20q-Amp	Del_7q36.3	0.777	1
18q-Del	Amp_11p13	0.777	1
18q-Del	Del_7q36.3	0.777	1
Amp_11p13	Amp_13q22.1	0.777	1
Amp_11p13	Amp_17q11.2	0.777	1
ARID1A	Amp_1p34.2	0.778	1
ARID1A	Amp_16p11.2	0.778	1
4q-Del	Amp_3p25.2	0.778	1
4q-Del	Amp_5p15.33	0.778	1
Amp_1p34.2	Amp_5p15.33	0.778	1
Amp_3p25.2	Amp_16p11.2	0.778	1
Amp_17q23.3	Del_11p15.5	0.778	1
TP53	17p-Del	0.779	1
Amp_3p25.2	Amp_7p11.2	0.779	1
Del_17p12	Del_22q13.32	0.779	1
KLF5	Del_Xp11.3	0.78	1
19p-Del	4q-Del	0.78	1
19p-Del	Amp_1p34.2	0.78	1
19p-Del	Amp_16p11.2	0.78	1
4q-Del	Del_Xp11.3	0.78	1
Amp_1p34.2	Del_Xp11.3	0.78	1
EP300	Amp_1q21.3	0.781	1
KDM6A	Amp_3q26.33	0.781	1
RB1	Amp_10p14	0.781	1
11p-Del	Del_16p13.3	0.781	1
9p-Del	Amp_11q13.3	0.781	1
Amp_1q21.3	Amp_7p21.1	0.781	1
Amp_1q21.3	Del_11q23.3	0.781	1
Amp_10p14	Amp_11q13.3	0.781	1
BTG2	ECM1	0.782	1
BTG2	1q-Amp	0.782	1
CX3CL1	ZFP36L1	0.782	1
CX3CL1	Amp_4q13.3	0.782	1
CX3CL1	Amp_11q22.2	0.782	1
HRAS	CEP192	0.782	1
HRAS	ECM1	0.782	1
HRAS	1q-Amp	0.782	1
HRAS	16p-Del	0.782	1
HRAS	Amp_16q22.1	0.782	1
ZFP36L1	CEP192	0.782	1
ZFP36L1	ECM1	0.782	1
ZFP36L1	1q-Amp	0.782	1
ZFP36L1	16p-Del	0.782	1
ZFP36L1	Amp_16q22.1	0.782	1
CEP192	Amp_4q13.3	0.782	1
CEP192	Amp_11q22.2	0.782	1
ECM1	Amp_11q22.2	0.782	1
FAT1	Del_9p21.3	0.782	1
1q-Amp	Amp_11q22.2	0.782	1
20q-Amp	Del_9p21.3	0.782	1
16p-Del	Amp_4q13.3	0.782	1
16p-Del	Amp_11q22.2	0.782	1
18q-Del	Del_9p21.3	0.782	1
Amp_1q23.3	Del_9p23	0.782	1
EP300	FAT1	0.783	1
20q-Amp	9q-Del	0.783	1
20q-Amp	Amp_3q26.33	0.783	1
7p-Amp	Del_8p23.1	0.783	1
18q-Del	9q-Del	0.783	1
18q-Del	Amp_3q26.33	0.783	1
18q-Del	Del_11q23.3	0.783	1
9q-Del	Amp_17q11.2	0.783	1
Amp_3q26.33	Amp_13q22.1	0.783	1
Amp_7p21.1	Amp_17q11.2	0.783	1
Amp_17q11.2	Del_5q12.1	0.783	1
Del_2q22.1	Del_8p23.1	0.783	1
ERBB3	FAT1	0.784	1
ERBB3	20q-Amp	0.784	1
20q-Amp	Del_16q23.1	0.784	1
EP300	Amp_1p34.2	0.785	1
EP300	Amp_16p11.2	0.785	1
ERBB3	TPTE	0.785	1
ERBB3	TXNIP	0.785	1
ERBB3	Amp_9p24.1	0.785	1
ERBB3	Amp_12p12.1	0.785	1
ERBB3	Del_12p13.1	0.785	1
GPC5	8q-Amp	0.785	1
TPTE	8q-Amp	0.785	1
TXNIP	8q-Amp	0.785	1
TXNIP	Del_16q23.1	0.785	1
8q-Amp	Amp_9p24.1	0.785	1
4q-Del	Amp_3q26.33	0.785	1
4q-Del	Del_11q23.3	0.785	1
4q-Del	Del_11q25	0.785	1
9p-Del	Amp_1q23.3	0.785	1
9q-Del	Amp_16p11.2	0.785	1
Amp_1p34.2	Amp_3q26.33	0.785	1
Amp_1p34.2	Amp_7p21.1	0.785	1
Amp_12p12.1	Del_16q23.1	0.785	1
Amp_16p11.2	Del_5q12.1	0.785	1
Amp_16p11.2	Del_11q25	0.785	1
Del_12p13.1	Del_16q23.1	0.785	1
CDKN2A	ERCC2	0.786	1
CDKN2A	5p-Amp	0.786	1
CDKN2A	Del_19p13.3	0.786	1
CREBBP	FOXQ1	0.786	1
CREBBP	MIPOL1	0.786	1
CREBBP	17q-Amp	0.786	1
CREBBP	3p-Amp	0.786	1
CREBBP	14q-Del	0.786	1
CREBBP	15q-Del	0.786	1
ERCC2	FOXA1	0.786	1
ERCC2	17q-Amp	0.786	1
ERCC2	14q-Del	0.786	1
FGFR3	MIPOL1	0.786	1
FGFR3	15q-Del	0.786	1
FGFR3	Del_1p36.11	0.786	1
FOXA1	Amp_12q15	0.786	1
FOXQ1	Del_4q34.2	0.786	1
MIPOL1	Amp_12q15	0.786	1
MIPOL1	Del_19p13.3	0.786	1
17q-Amp	5p-Amp	0.786	1
17q-Amp	Del_4q34.2	0.786	1
17q-Amp	Del_19p13.3	0.786	1
3p-Amp	5p-Amp	0.786	1
3p-Amp	Del_19p13.3	0.786	1
5p-Amp	14q-Del	0.786	1
Amp_8q22.3	Del_Xp11.3	0.787	1
CREBBP	5q-Del	0.788	1
ERCC2	Amp_19q13.43	0.788	1
FGFR3	Amp_19q13.43	0.788	1
TP53	11q-Del	0.788	1
TP53	Del_10q23.31	0.788	1
20p-Amp	Del_4q34.2	0.788	1
5p-Amp	Amp_2p25.1	0.788	1
5q-Del	Amp_12q15	0.788	1
Amp_2p25.1	Amp_12q15	0.788	1
Amp_19q13.43	Del_4q34.2	0.788	1
CDKN2A	Del_11p15.5	0.789	1
EP300	17p-Del	0.789	1
EP300	Del_13q14.2	0.789	1
RHOB	Del_11p15.5	0.789	1
ACRC	Amp_6p22.3	0.789	1
RAD51C	Amp_6p22.3	0.789	1
17q-Amp	Del_11p15.5	0.789	1
Amp_6p22.3	Amp_6q21	0.789	1
Amp_6p22.3	Amp_6q23.3	0.789	1
Amp_6p22.3	Del_1q32.1	0.789	1
Del_11q23.3	Del_13q14.2	0.789	1
Del_11q25	Del_13q14.2	0.789	1
20p-Amp	Amp_7p11.2	0.79	1
Amp_7p11.2	Del_22q13.32	0.79	1
ELF3	4q-Del	0.791	1
ERBB3	Amp_11p13	0.791	1
ERBB3	Del_7q36.3	0.791	1
KLF5	TSC1	0.791	1
KLF5	3q-Amp	0.791	1
KLF5	7p-Amp	0.791	1
KLF5	Del_2q22.1	0.791	1
PIK3CA	RXRA	0.791	1
RXRA	Amp_20q11.21	0.791	1
SPTAN1	Amp_11p13	0.791	1
SPTAN1	Del_7q36.3	0.791	1
STAG2	Amp_11p13	0.791	1
STAG2	Del_7q36.3	0.791	1
3q-Amp	Amp_1p34.2	0.791	1
8q-Amp	Amp_11p13	0.791	1
8q-Amp	Del_7q36.3	0.791	1
4p-Del	Del_9q33.2	0.791	1
Amp_1p34.2	Amp_4p16.3	0.791	1
Amp_1p34.2	Del_15q13.1	0.791	1
Amp_11p13	Del_16q23.1	0.791	1
Amp_17q12	Del_9q33.2	0.791	1
Amp_20q11.21	Amp_22q12.2	0.791	1
Del_7q36.3	Del_16q23.1	0.791	1
ERBB3	Del_11p15.5	0.792	1
GPC5	PIK3CA	0.792	1
PIK3CA	TPTE	0.792	1
STAG2	Del_11p15.5	0.792	1
8q-Amp	Del_11p15.5	0.792	1
Amp_12p12.1	Amp_20q11.21	0.792	1
Amp_20q11.21	Del_12p13.1	0.792	1
Del_11p15.5	Del_16q23.1	0.792	1
CX3CL1	Del_18q23	0.793	1
CEP192	Amp_19q12	0.793	1
ECM1	Del_18q23	0.793	1
Amp_16q22.1	Amp_19q12	0.793	1
Amp_16q22.1	Del_18q23	0.793	1
Amp_8q22.3	Del_16q23.1	0.794	1
Amp_19q12	Del_2q37.1	0.794	1
CDKN2A	PHLDA3	0.795	1
CDKN2A	ACRC	0.795	1
CDKN2A	RAD51C	0.795	1
CDKN2A	Amp_6q21	0.795	1
CDKN2A	Amp_6q23.3	0.795	1
CDKN2A	Del_Xq21.33	0.795	1
FOXA1	PHLDA3	0.795	1
FOXA1	ACRC	0.795	1
FOXA1	19q-Amp	0.795	1
FOXA1	Amp_6q21	0.795	1
FOXA1	Amp_6q23.3	0.795	1
FOXA1	Del_1q32.1	0.795	1
FOXQ1	ACRC	0.795	1
FOXQ1	RAD51C	0.795	1
FOXQ1	19q-Amp	0.795	1
FOXQ1	Amp_6q21	0.795	1
FOXQ1	Del_Xq21.33	0.795	1
MIPOL1	PHLDA3	0.795	1
MIPOL1	ACRC	0.795	1
MIPOL1	RAD51C	0.795	1
MIPOL1	19q-Amp	0.795	1
MIPOL1	Amp_6q21	0.795	1
MIPOL1	Del_Xq21.33	0.795	1
PHLDA3	RHOB	0.795	1
PHLDA3	17q-Amp	0.795	1
PHLDA3	3p-Amp	0.795	1
PHLDA3	14q-Del	0.795	1
PHLDA3	15q-Del	0.795	1
PHLDA3	Del_1p36.11	0.795	1
RHOB	ACRC	0.795	1
RHOB	RAD51C	0.795	1
RHOB	19q-Amp	0.795	1
RHOB	Amp_6q21	0.795	1
RHOB	Amp_6q23.3	0.795	1
RHOB	Del_1q32.1	0.795	1
RHOB	Del_Xq21.33	0.795	1
ACRC	17q-Amp	0.795	1
ACRC	14q-Del	0.795	1
ACRC	15q-Del	0.795	1
RAD51C	17q-Amp	0.795	1
RAD51C	3p-Amp	0.795	1
RAD51C	Del_1p36.11	0.795	1
17q-Amp	Amp_6q23.3	0.795	1
19q-Amp	3p-Amp	0.795	1
19q-Amp	15q-Del	0.795	1
19q-Amp	Del_1p36.11	0.795	1
3p-Amp	Amp_6q21	0.795	1
3p-Amp	Amp_6q23.3	0.795	1
3p-Amp	Del_1q32.1	0.795	1
10q-Del	Del_9p21.3	0.795	1
14q-Del	Amp_6q21	0.795	1
14q-Del	Del_Xq21.33	0.795	1
15q-Del	Amp_6q23.3	0.795	1
15q-Del	Del_1q32.1	0.795	1
Amp_6q21	Del_1p36.11	0.795	1
Amp_6q23.3	Del_1p36.11	0.795	1
Del_1p36.11	Del_1q32.1	0.795	1
Del_2q22.1	Del_9p21.3	0.795	1
Del_4q22.1	Del_9p21.3	0.795	1
ERBB3	Del_18q23	0.796	1
FGFR3	Amp_20q11.21	0.796	1
PIK3CA	Del_4q34.2	0.796	1
8q-Amp	Del_18q23	0.796	1
Amp_19q12	Del_16q23.1	0.796	1
Amp_20q11.21	Del_4q34.2	0.796	1
ASXL2	RXRA	0.797	1
ASXL2	7q-Amp	0.797	1
ASXL2	Amp_17q12	0.797	1
ASXL2	Amp_22q12.2	0.797	1
FBXW7	RB1	0.797	1
FBXW7	MLL	0.797	1
FBXW7	RBM26	0.797	1
KDM6A	MLL	0.797	1
KLF5	Amp_1q21.3	0.797	1
KLF5	Del_9p23	0.797	1
RB1	4p-Del	0.797	1
RB1	Amp_22q12.2	0.797	1
RXRA	RBM26	0.797	1
RXRA	Amp_11q13.3	0.797	1
RXRA	Del_16p13.3	0.797	1
MLL	Amp_17q12	0.797	1
MLL	Amp_22q12.2	0.797	1
RBM26	7q-Amp	0.797	1
RBM26	4p-Del	0.797	1
RBM26	Amp_17q12	0.797	1
7q-Amp	22q-Del	0.797	1
7q-Amp	Amp_11q13.3	0.797	1
7q-Amp	Amp_16p13.2	0.797	1
7q-Amp	Del_2q34	0.797	1
4p-Del	Amp_11q13.3	0.797	1
4p-Del	Amp_16p13.2	0.797	1
Amp_3p25.2	Del_13q14.2	0.797	1
Amp_8q22.3	Amp_20q11.21	0.797	1
Amp_11q13.3	Amp_17q12	0.797	1
Amp_12q15	Del_17p12	0.797	1
Amp_16p13.2	Del_14q24.1	0.797	1
Amp_17q12	Del_2q34	0.797	1
Amp_17q12	Del_16p13.3	0.797	1
CREBBP	TP53	0.798	1
ERCC2	TP53	0.798	1
TP53	Del_4q34.2	0.798	1
8p-Del	Amp_3q26.33	0.798	1
9p-Del	Amp_3q26.33	0.798	1
BTG2	CDKN1A	0.799	1
BTG2	Amp_8p11.23	0.799	1
CDKN1A	Amp_11q22.2	0.799	1
CDKN1A	Del_2q34	0.799	1
HRAS	Amp_8p11.23	0.799	1
HRAS	Del_3p14.2	0.799	1
ZFP36L1	Amp_17q23.3	0.799	1
ZFP36L1	Del_3p14.2	0.799	1
ZFP36L1	Del_6q27	0.799	1
MLL	Amp_17q23.3	0.799	1
11q-Del	Del_16p13.3	0.799	1
Amp_4q13.3	Del_10q23.31	0.799	1
Amp_6p22.3	Del_4q22.1	0.799	1
Amp_11q13.3	Del_6q27	0.799	1
Del_8p23.1	Del_12p13.1	0.799	1
6q-Del	Amp_5p15.33	0.8	1
Amp_5p15.33	Amp_19q13.43	0.8	1
Amp_5p15.33	Del_22q13.32	0.8	1
ASXL2	Del_Xp11.3	0.801	1
RBM26	19p-Del	0.801	1
RBM26	Del_Xp11.3	0.801	1
19p-Del	22q-Del	0.801	1
19p-Del	Amp_16p13.2	0.801	1
8p-Del	Del_11p15.5	0.801	1
Amp_16p13.2	Del_Xp11.3	0.801	1
ERCC2	Amp_1q23.3	0.802	1
20p-Amp	Del_7q36.3	0.805	1
5q-Del	Amp_11p13	0.805	1
5q-Del	Del_7q36.3	0.805	1
6q-Del	Amp_11p13	0.805	1
Amp_2p25.1	Amp_11p13	0.805	1
Amp_2p25.1	Del_7q36.3	0.805	1
Amp_11p13	Amp_19q13.43	0.805	1
Amp_11p13	Del_6p25.3	0.805	1
Amp_11p13	Del_22q13.32	0.805	1
Amp_19q13.43	Del_7q36.3	0.805	1
Amp_20q11.21	Del_13q14.2	0.805	1
Del_6p25.3	Del_7q36.3	0.805	1
Del_7q36.3	Del_22q13.32	0.805	1
ASXL2	Del_9p21.3	0.806	1
MLL2	Amp_4q13.3	0.806	1
MLL2	Amp_11q22.2	0.806	1
22q-Del	Del_9p21.3	0.806	1
ASXL2	MLL2	0.807	1
CDKN2A	FAT1	0.807	1
CDKN2A	20q-Amp	0.807	1
CDKN2A	Amp_17q11.2	0.807	1
FOXA1	FAT1	0.807	1
FOXA1	Amp_13q22.1	0.807	1
FOXA1	Amp_17q11.2	0.807	1
FOXQ1	FAT1	0.807	1
FOXQ1	20q-Amp	0.807	1
FOXQ1	Amp_13q22.1	0.807	1
MIPOL1	FAT1	0.807	1
MIPOL1	20q-Amp	0.807	1
MLL2	RBM26	0.807	1
RHOB	20q-Amp	0.807	1
RHOB	Amp_13q22.1	0.807	1
FAT1	17q-Amp	0.807	1
FAT1	15q-Del	0.807	1
17q-Amp	Amp_13q22.1	0.807	1
20q-Amp	14q-Del	0.807	1
20q-Amp	Del_1p36.11	0.807	1
3p-Amp	18q-Del	0.807	1
3p-Amp	Amp_13q22.1	0.807	1
3p-Amp	Amp_17q11.2	0.807	1
14q-Del	Amp_17q11.2	0.807	1
15q-Del	Amp_17q11.2	0.807	1
Amp_7p11.2	Amp_11q13.3	0.808	1
Amp_7p11.2	Del_2q34	0.808	1
CX3CL1	Amp_7p21.1	0.809	1
CX3CL1	Del_5q12.1	0.809	1
CX3CL1	Del_11q23.3	0.809	1
EP300	Amp_16q22.1	0.809	1
GPC5	Amp_10p14	0.809	1
TXNIP	8p-Del	0.809	1
CEP192	9q-Del	0.809	1
CEP192	Amp_7p21.1	0.809	1
CEP192	Del_5q12.1	0.809	1
CEP192	Del_11q25	0.809	1
ECM1	9q-Del	0.809	1
1q-Amp	Amp_3q26.33	0.809	1
1q-Amp	Del_5q12.1	0.809	1
16p-Del	Amp_3q26.33	0.809	1
16p-Del	Amp_7p21.1	0.809	1
9p-Del	Del_12p13.1	0.809	1
Amp_1q21.3	Amp_7p11.2	0.809	1
Amp_10p14	Del_12p13.1	0.809	1
Amp_16q22.1	Del_5q12.1	0.809	1
GPC5	20p-Amp	0.81	1
GPC5	5q-Del	0.81	1
GPC5	Amp_2p25.1	0.81	1
GPC5	Del_22q13.32	0.81	1
TPTE	6q-Del	0.81	1
TPTE	Amp_19q13.43	0.81	1
TPTE	Del_6p25.3	0.81	1
TXNIP	6q-Del	0.81	1
TXNIP	Amp_19q13.43	0.81	1
TXNIP	Del_6p25.3	0.81	1
20p-Amp	Del_12p13.1	0.81	1
5q-Del	Amp_9p24.1	0.81	1
5q-Del	Amp_12p12.1	0.81	1
6q-Del	Amp_12p12.1	0.81	1
6q-Del	Del_12p13.1	0.81	1
Amp_2p25.1	Amp_9p24.1	0.81	1
Amp_2p25.1	Amp_12p12.1	0.81	1
Amp_12p12.1	Amp_19q13.43	0.81	1
Amp_12p12.1	Del_22q13.32	0.81	1
Amp_17q11.2	Del_13q14.2	0.81	1
Del_12p13.1	Del_22q13.32	0.81	1
CDKN1A	NFE2L2	0.811	1
CDKN1A	10q-Del	0.811	1
CDKN1A	Del_2q22.1	0.811	1
CDKN1A	Del_4q22.1	0.811	1
CDKN1A	Del_15q13.1	0.811	1
ELF3	Amp_8p11.23	0.811	1
NFE2L2	11q-Del	0.811	1
TP53	Del_16q23.1	0.811	1
TSC1	11q-Del	0.811	1
TSC1	Amp_8p11.23	0.811	1
TSC1	Del_6q27	0.811	1
7p-Amp	Amp_8p11.23	0.811	1
7p-Amp	Del_10q23.31	0.811	1
10q-Del	Amp_8p11.23	0.811	1
11q-Del	Del_4q22.1	0.811	1
Amp_4p16.3	Amp_17q23.3	0.811	1
Amp_4p16.3	Del_3p14.2	0.811	1
Amp_8p11.23	Del_15q13.1	0.811	1
Amp_17q23.3	Del_2q22.1	0.811	1
Amp_17q23.3	Del_4q22.1	0.811	1
Del_2q22.1	Del_3p14.2	0.811	1
Del_4q22.1	Del_6q27	0.811	1
ASXL2	Amp_19q12	0.812	1
FBXW7	Amp_10p14	0.812	1
RBM26	Del_18q23	0.812	1
7q-Amp	8p-Del	0.812	1
22q-Del	Amp_19q12	0.812	1
4p-Del	Amp_10p14	0.812	1
8p-Del	Amp_22q12.2	0.812	1
9p-Del	Amp_22q12.2	0.812	1
MLL2	RXRA	0.814	1
PHLDA3	Amp_20q11.21	0.814	1
PIK3CA	RAD51C	0.814	1
PIK3CA	19q-Amp	0.814	1
PIK3CA	Del_1q32.1	0.814	1
SPTAN1	STAG2	0.814	1
SPTAN1	8q-Amp	0.814	1
SPTAN1	Del_16q23.1	0.814	1
ACRC	Amp_20q11.21	0.814	1
ACRC	Del_9q33.2	0.814	1
19q-Amp	Amp_20q11.21	0.814	1
20p-Amp	Amp_1q23.3	0.814	1
8q-Amp	Del_16q23.1	0.814	1
6q-Del	Amp_1q23.3	0.814	1
Amp_1q23.3	Del_22q13.32	0.814	1
CX3CL1	CEP192	0.815	1
CX3CL1	ECM1	0.815	1
CX3CL1	1q-Amp	0.815	1
CX3CL1	16p-Del	0.815	1
CX3CL1	Amp_16q22.1	0.815	1
MLL2	Del_8p23.1	0.815	1
CEP192	ECM1	0.815	1
CEP192	1q-Amp	0.815	1
CEP192	Amp_16q22.1	0.815	1
16p-Del	Amp_16q22.1	0.815	1
Amp_16p11.2	Del_11p15.5	0.815	1
BTG2	Del_2q34	0.817	1
BTG2	Del_16p13.3	0.817	1
RB1	ZFP36L1	0.817	1
ZFP36L1	MLL	0.817	1
ZFP36L1	Del_2q34	0.817	1
MLL	Amp_4q13.3	0.817	1
20q-Amp	Del_6p25.3	0.817	1
20q-Amp	Del_22q13.32	0.817	1
Amp_2p25.1	Amp_17q11.2	0.817	1
Amp_11q22.2	Del_2q34	0.817	1
Amp_17q11.2	Del_22q13.32	0.817	1
ARID1A	5p-Amp	0.819	1
ARID1A	Del_4q34.2	0.819	1
HRAS	Del_17p12	0.819	1
RXRA	Amp_11p13	0.819	1
RXRA	Del_7q36.3	0.819	1
5p-Amp	Amp_3p25.2	0.819	1
4p-Del	Amp_11p13	0.819	1
Amp_3p25.2	Del_4q34.2	0.819	1
Amp_4q13.3	Del_17p12	0.819	1
Amp_5p15.33	Del_4q34.2	0.819	1
Amp_11p13	Amp_17q12	0.819	1
Amp_11p13	Amp_22q12.2	0.819	1
Amp_11p13	Del_14q24.1	0.819	1
Amp_17q12	Del_7q36.3	0.819	1
Amp_22q12.2	Del_7q36.3	0.819	1
Del_7q36.3	Del_14q24.1	0.819	1
CDKN2A	Amp_6p22.3	0.82	1
FOXA1	Amp_6p22.3	0.82	1
FOXQ1	Amp_6p22.3	0.82	1
KDM6A	20p-Amp	0.82	1
KDM6A	Del_6p25.3	0.82	1
MLL2	Amp_10p14	0.82	1
RHOB	Amp_6p22.3	0.82	1
3p-Amp	Amp_6p22.3	0.82	1
17p-Del	Del_13q14.2	0.82	1
Amp_1q21.3	Amp_2p25.1	0.82	1
Amp_2p25.1	Del_9p23	0.82	1
Amp_6p22.3	Del_1p36.11	0.82	1
Del_6p25.3	Del_9p23	0.82	1
CREBBP	Amp_10p14	0.821	1
ERBB3	9q-Del	0.821	1
ERCC2	Amp_10p14	0.821	1
GPC5	19p-Del	0.821	1
GPC5	Del_Xp11.3	0.821	1
SPTAN1	Del_5q12.1	0.821	1
TPTE	19p-Del	0.821	1
TPTE	Del_Xp11.3	0.821	1
TXNIP	19p-Del	0.821	1
TXNIP	Del_Xp11.3	0.821	1
CEP192	Amp_1q23.3	0.821	1
ECM1	Amp_1q23.3	0.821	1
5p-Amp	11p-Del	0.821	1
5p-Amp	8p-Del	0.821	1
8q-Amp	9q-Del	0.821	1
8q-Amp	Del_11q23.3	0.821	1
19p-Del	Amp_9p24.1	0.821	1
19p-Del	Amp_12p12.1	0.821	1
19p-Del	Del_12p13.1	0.821	1
4q-Del	Amp_16p11.2	0.821	1
9p-Del	Amp_12q15	0.821	1
Amp_9p24.1	Del_Xp11.3	0.821	1
Del_12p13.1	Del_Xp11.3	0.821	1
BTG2	PHLDA3	0.822	1
BTG2	ACRC	0.822	1
BTG2	RAD51C	0.822	1
BTG2	Amp_6q21	0.822	1
BTG2	Amp_6q23.3	0.822	1
CREBBP	Del_8p23.1	0.822	1
CX3CL1	TP53	0.822	1
HRAS	ACRC	0.822	1
HRAS	19q-Amp	0.822	1
HRAS	Amp_6q21	0.822	1
HRAS	Amp_6q23.3	0.822	1
HRAS	Del_1q32.1	0.822	1
HRAS	Del_Xq21.33	0.822	1
PHLDA3	Amp_4q13.3	0.822	1
PHLDA3	Amp_11q22.2	0.822	1
TP53	1q-Amp	0.822	1
ZFP36L1	ACRC	0.822	1
ZFP36L1	Amp_6q23.3	0.822	1
ZFP36L1	Del_1q32.1	0.822	1
ZFP36L1	Del_Xq21.33	0.822	1
ACRC	Amp_4q13.3	0.822	1
ACRC	Amp_11q22.2	0.822	1
RAD51C	Amp_4q13.3	0.822	1
RAD51C	Amp_11q22.2	0.822	1
19q-Amp	Amp_4q13.3	0.822	1
19q-Amp	Amp_11q22.2	0.822	1
Amp_4q13.3	Amp_6q23.3	0.822	1
Amp_4q13.3	Del_1q32.1	0.822	1
Amp_4q13.3	Del_Xq21.33	0.822	1
Amp_6q21	Amp_11q22.2	0.822	1
Amp_6q23.3	Amp_11q22.2	0.822	1
Amp_11q22.2	Del_1q32.1	0.822	1
Amp_11q22.2	Del_Xq21.33	0.822	1
ERCC2	RXRA	0.823	1
ERCC2	7q-Amp	0.823	1
ERCC2	Amp_22q12.2	0.823	1
ERCC2	Del_14q24.1	0.823	1
FBXW7	Amp_12q15	0.823	1
FGFR3	RXRA	0.823	1
FOXA1	Del_9p21.3	0.823	1
MLL2	Amp_13q22.1	0.823	1
RXRA	5p-Amp	0.823	1
17q-Amp	Del_9p21.3	0.823	1
3p-Amp	Del_9p21.3	0.823	1
5p-Amp	Amp_17q12	0.823	1
14q-Del	Del_9p21.3	0.823	1
4p-Del	Amp_12q15	0.823	1
Amp_12q15	Amp_17q12	0.823	1
Amp_12q15	Del_14q24.1	0.823	1
Amp_16p13.2	Del_17p12	0.823	1
Amp_22q12.2	Del_19p13.3	0.823	1
ASXL2	ELF3	0.824	1
ASXL2	NFE2L2	0.824	1
ASXL2	7p-Amp	0.824	1
ASXL2	10q-Del	0.824	1
ASXL2	Amp_4p16.3	0.824	1
ASXL2	Del_2q22.1	0.824	1
ASXL2	Del_4q22.1	0.824	1
ASXL2	Del_15q13.1	0.824	1
CX3CL1	17p-Del	0.824	1
CX3CL1	Del_13q14.2	0.824	1
ELF3	22q-Del	0.824	1
ELF3	Amp_16p13.2	0.824	1
NFE2L2	22q-Del	0.824	1
TSC1	22q-Del	0.824	1
CEP192	17p-Del	0.824	1
CEP192	Del_13q14.2	0.824	1
ECM1	Del_13q14.2	0.824	1
RBM26	7p-Amp	0.824	1
RBM26	10q-Del	0.824	1
RBM26	Del_2q22.1	0.824	1
1q-Amp	Del_13q14.2	0.824	1
7p-Amp	22q-Del	0.824	1
10q-Del	Amp_16p13.2	0.824	1
16p-Del	17p-Del	0.824	1
16p-Del	Del_13q14.2	0.824	1
22q-Del	Amp_4p16.3	0.824	1
22q-Del	Del_4q22.1	0.824	1
Amp_16p13.2	Del_2q22.1	0.824	1
MLL2	19p-Del	0.826	1
Amp_8p11.23	Amp_19q12	0.826	1
Amp_17q23.3	Amp_19q12	0.826	1
Amp_19q12	Del_3p14.2	0.826	1
Del_3p14.2	Del_18q23	0.826	1
EP300	Amp_7p11.2	0.827	1
GPC5	Del_2q37.1	0.827	1
PHLDA3	Amp_10p14	0.827	1
TPTE	Del_2q37.1	0.827	1
TXNIP	Del_2q37.1	0.827	1
ACRC	11p-Del	0.827	1
ACRC	8p-Del	0.827	1
ACRC	9p-Del	0.827	1
RAD51C	11p-Del	0.827	1
RAD51C	8p-Del	0.827	1
RAD51C	9p-Del	0.827	1
RAD51C	Amp_10p14	0.827	1
19q-Amp	9p-Del	0.827	1
11p-Del	Amp_6q23.3	0.827	1
11p-Del	Del_1q32.1	0.827	1
8p-Del	Del_Xq21.33	0.827	1
Amp_3q26.33	Amp_7p11.2	0.827	1
Amp_3q26.33	Del_2q37.1	0.827	1
Amp_6p22.3	Amp_20q11.21	0.827	1
Amp_6q23.3	Amp_10p14	0.827	1
Amp_7p21.1	Del_2q37.1	0.827	1
Amp_10p14	Del_1q32.1	0.827	1
Del_2q37.1	Del_12p13.1	0.827	1
CDKN2A	ERBB3	0.828	1
ERBB3	FOXA1	0.828	1
ERBB3	FOXQ1	0.828	1
ERBB3	17q-Amp	0.828	1
ERBB3	15q-Del	0.828	1
FOXA1	8q-Amp	0.828	1
FOXA1	Del_16q23.1	0.828	1
MIPOL1	STAG2	0.828	1
STAG2	14q-Del	0.828	1
STAG2	15q-Del	0.828	1
8q-Amp	14q-Del	0.828	1
8q-Amp	15q-Del	0.828	1
8q-Amp	Del_1p36.11	0.828	1
14q-Del	Del_16q23.1	0.828	1
Amp_6p22.3	Amp_17q23.3	0.828	1
Del_1p36.11	Del_16q23.1	0.828	1
RB1	MLL	0.829	1
RB1	Del_16p13.3	0.829	1
Amp_1q23.3	Del_2q37.1	0.829	1
ASXL2	Amp_7p21.1	0.831	1
ASXL2	Del_11q23.3	0.831	1
CDKN1A	CREBBP	0.831	1
CDKN1A	Del_4q34.2	0.831	1
CDKN1A	Del_19p13.3	0.831	1
CREBBP	Amp_8p11.23	0.831	1
CREBBP	Del_3p14.2	0.831	1
ERCC2	Del_6q27	0.831	1
ERCC2	Del_10q23.31	0.831	1
FGFR3	Amp_8p11.23	0.831	1
FGFR3	Del_6q27	0.831	1
RBM26	9q-Del	0.831	1
RBM26	Del_11q23.3	0.831	1
RBM26	Del_11q25	0.831	1
5p-Amp	11q-Del	0.831	1
5p-Amp	Amp_17q23.3	0.831	1
5p-Amp	Del_10q23.31	0.831	1
11q-Del	Amp_12q15	0.831	1
11q-Del	Del_19p13.3	0.831	1
22q-Del	Amp_3q26.33	0.831	1
22q-Del	Amp_7p21.1	0.831	1
22q-Del	Del_11q23.3	0.831	1
22q-Del	Del_11q25	0.831	1
9q-Del	Amp_16p13.2	0.831	1
Amp_8p11.23	Del_4q34.2	0.831	1
Amp_12q15	Amp_17q23.3	0.831	1
Amp_12q15	Del_6q27	0.831	1
Amp_12q15	Del_10q23.31	0.831	1
Amp_16p13.2	Del_5q12.1	0.831	1
Amp_16p13.2	Del_11q23.3	0.831	1
Amp_16p13.2	Del_11q25	0.831	1
ARID1A	ZFP36L1	0.832	1
ARID1A	Amp_4q13.3	0.832	1
BTG2	Amp_3p25.2	0.832	1
CX3CL1	Del_8p23.1	0.832	1
HRAS	Amp_3p25.2	0.832	1
KLF5	Amp_1q23.3	0.832	1
CEP192	Del_8p23.1	0.832	1
1q-Amp	Del_8p23.1	0.832	1
17p-Del	8p-Del	0.832	1
9p-Del	Del_13q14.2	0.832	1
Amp_1p34.2	Amp_1q23.3	0.832	1
Amp_1q23.3	Amp_16p11.2	0.832	1
Amp_16q22.1	Del_8p23.1	0.832	1
Amp_17q12	Del_17p12	0.832	1
7q-Amp	Del_2q37.1	0.833	1
Amp_22q12.2	Del_2q37.1	0.833	1
ELF3	Amp_11p13	0.834	1
ELF3	Del_7q36.3	0.834	1
FBXW7	GPC5	0.834	1
FBXW7	TPTE	0.834	1
FBXW7	TXNIP	0.834	1
FBXW7	Amp_9p24.1	0.834	1
FBXW7	Amp_12p12.1	0.834	1
FBXW7	Del_12p13.1	0.834	1
GPC5	Del_14q24.1	0.834	1
MLL2	Del_3p14.2	0.834	1
NFE2L2	Amp_11p13	0.834	1
NFE2L2	Del_7q36.3	0.834	1
RB1	Del_2q22.1	0.834	1
RB1	Del_4q22.1	0.834	1
RXRA	TPTE	0.834	1
RXRA	Amp_12p12.1	0.834	1
TPTE	7q-Amp	0.834	1
TPTE	4p-Del	0.834	1
TPTE	Amp_17q12	0.834	1
TPTE	Amp_22q12.2	0.834	1
TXNIP	4p-Del	0.834	1
TXNIP	Amp_17q12	0.834	1
TSC1	Amp_11p13	0.834	1
TSC1	Amp_11q13.3	0.834	1
TSC1	Del_7q36.3	0.834	1
MLL	3q-Amp	0.834	1
MLL	Del_15q13.1	0.834	1
3q-Amp	Amp_11p13	0.834	1
3q-Amp	Del_7q36.3	0.834	1
7p-Amp	Del_16p13.3	0.834	1
7q-Amp	Amp_9p24.1	0.834	1
7q-Amp	Del_12p13.1	0.834	1
10q-Del	Amp_11p13	0.834	1
10q-Del	Amp_11q13.3	0.834	1
10q-Del	Del_7q36.3	0.834	1
9q-Del	Amp_1q23.3	0.834	1
Amp_1q23.3	Amp_7p21.1	0.834	1
Amp_1q23.3	Del_11q23.3	0.834	1
Amp_1q23.3	Del_11q25	0.834	1
Amp_4p16.3	Amp_11p13	0.834	1
Amp_4p16.3	Amp_11q13.3	0.834	1
Amp_4p16.3	Del_2q34	0.834	1
Amp_4p16.3	Del_7q36.3	0.834	1
Amp_9p24.1	Amp_22q12.2	0.834	1
Amp_11p13	Del_2q22.1	0.834	1
Amp_11p13	Del_4q22.1	0.834	1
Amp_11p13	Del_15q13.1	0.834	1
Amp_12p12.1	Amp_22q12.2	0.834	1
Amp_12p12.1	Del_14q24.1	0.834	1
Del_2q22.1	Del_7q36.3	0.834	1
Del_2q34	Del_4q22.1	0.834	1
Del_4q22.1	Del_16p13.3	0.834	1
Del_7q36.3	Del_15q13.1	0.834	1
Del_12p13.1	Del_14q24.1	0.834	1
BTG2	Del_4q34.2	0.835	1
BTG2	Del_19p13.3	0.835	1
CREBBP	ZFP36L1	0.835	1
ERCC2	Amp_11q22.2	0.835	1
HRAS	Amp_12q15	0.835	1
20p-Amp	Del_18q23	0.835	1
19p-Del	Del_17p12	0.835	1
5q-Del	Amp_19q12	0.835	1
Amp_4q13.3	Amp_12q15	0.835	1
Amp_4q13.3	Del_4q34.2	0.835	1
Amp_4q13.3	Del_19p13.3	0.835	1
Amp_6p22.3	Del_16q23.1	0.835	1
Amp_19q13.43	Del_18q23	0.835	1
MLL2	Del_9p21.3	0.836	1
PIK3CA	20q-Amp	0.836	1
PIK3CA	18q-Del	0.836	1
20q-Amp	Del_9q33.2	0.836	1
18q-Del	Amp_20q11.21	0.836	1
18q-Del	Del_9q33.2	0.836	1
ELF3	PIK3CA	0.837	1
NFE2L2	Del_9q33.2	0.837	1
PIK3CA	TSC1	0.837	1
PIK3CA	3q-Amp	0.837	1
PIK3CA	Del_4q22.1	0.837	1
PIK3CA	Del_15q13.1	0.837	1
3q-Amp	Amp_20q11.21	0.837	1
3q-Amp	Del_9q33.2	0.837	1
Amp_4p16.3	Amp_20q11.21	0.837	1
Amp_20q11.21	Del_15q13.1	0.837	1
Del_2q22.1	Del_9q33.2	0.837	1
Del_9q33.2	Del_15q13.1	0.837	1
ARID1A	ASXL2	0.838	1
ARID1A	22q-Del	0.838	1
ARID1A	Amp_16p13.2	0.838	1
ASXL2	Amp_3p25.2	0.838	1
RBM26	Amp_5p15.33	0.838	1
22q-Del	Amp_5p15.33	0.838	1
PHLDA3	Amp_7p11.2	0.839	1
ACRC	Amp_7p11.2	0.839	1
RAD51C	Amp_7p11.2	0.839	1
19q-Amp	Amp_7p11.2	0.839	1
Amp_6q21	Amp_7p11.2	0.839	1
Amp_6q23.3	Amp_7p11.2	0.839	1
Amp_7p11.2	Del_Xq21.33	0.839	1
Amp_19q13.43	Del_11p15.5	0.839	1
Del_2q37.1	Del_Xq21.33	0.839	1
CREBBP	Del_9p23	0.84	1
EP300	TP53	0.84	1
KDM6A	Del_19p13.3	0.84	1
TP53	Del_11q25	0.84	1
Amp_1q21.3	Del_19p13.3	0.84	1
Amp_12q15	Del_9p23	0.84	1
CDKN2A	19p-Del	0.842	1
CDKN2A	Del_Xp11.3	0.842	1
FOXA1	Del_Xp11.3	0.842	1
FOXQ1	19p-Del	0.842	1
FOXQ1	Del_Xp11.3	0.842	1
MIPOL1	19p-Del	0.842	1
MIPOL1	Del_Xp11.3	0.842	1
RHOB	Del_Xp11.3	0.842	1
CEP192	Amp_8q22.3	0.842	1
17q-Amp	19p-Del	0.842	1
17q-Amp	Del_Xp11.3	0.842	1
3p-Amp	19p-Del	0.842	1
3p-Amp	Del_Xp11.3	0.842	1
14q-Del	19p-Del	0.842	1
14q-Del	Del_Xp11.3	0.842	1
15q-Del	19p-Del	0.842	1
15q-Del	Del_Xp11.3	0.842	1
16p-Del	Amp_8q22.3	0.842	1
19p-Del	Del_1p36.11	0.842	1
Amp_1q23.3	Del_3p14.2	0.842	1
Amp_8q22.3	Del_4q34.2	0.842	1
Del_1p36.11	Del_Xp11.3	0.842	1
ARID1A	Del_Xp11.3	0.844	1
ERBB3	20p-Amp	0.844	1
ERBB3	5q-Del	0.844	1
ERBB3	Amp_2p25.1	0.844	1
ERBB3	Amp_19q13.43	0.844	1
ERBB3	Del_6p25.3	0.844	1
SPTAN1	20p-Amp	0.844	1
SPTAN1	Del_6p25.3	0.844	1
STAG2	5q-Del	0.844	1
STAG2	6q-Del	0.844	1
STAG2	Amp_2p25.1	0.844	1
STAG2	Del_22q13.32	0.844	1
20p-Amp	Del_16q23.1	0.844	1
5p-Amp	Del_2q37.1	0.844	1
8q-Amp	5q-Del	0.844	1
8q-Amp	6q-Del	0.844	1
Amp_3p25.2	Del_Xp11.3	0.844	1
BTG2	Del_9p23	0.845	1
HRAS	KDM6A	0.845	1
HRAS	Del_9p23	0.845	1
KLF5	TP53	0.845	1
MLL2	Del_5q12.1	0.845	1
SPTAN1	17p-Del	0.845	1
TP53	4q-Del	0.845	1
ZFP36L1	Amp_1q21.3	0.845	1
ZFP36L1	Del_9p23	0.845	1
17p-Del	Del_16q23.1	0.845	1
Amp_1q21.3	Amp_4q13.3	0.845	1
Amp_11q22.2	Del_9p23	0.845	1
CDKN2A	20p-Amp	0.848	1
CDKN2A	5q-Del	0.848	1
CDKN2A	6q-Del	0.848	1
CDKN2A	Amp_2p25.1	0.848	1
CDKN2A	Amp_19q13.43	0.848	1
CDKN2A	Del_22q13.32	0.848	1
FBXW7	FAT1	0.848	1
FOXA1	5q-Del	0.848	1
FOXA1	Del_6p25.3	0.848	1
FOXA1	Del_22q13.32	0.848	1
FOXQ1	20p-Amp	0.848	1
FOXQ1	6q-Del	0.848	1
FOXQ1	Amp_19q13.43	0.848	1
FOXQ1	Del_6p25.3	0.848	1
KLF5	Amp_11p13	0.848	1
KLF5	Del_7q36.3	0.848	1
MIPOL1	20p-Amp	0.848	1
MIPOL1	5q-Del	0.848	1
MIPOL1	Amp_2p25.1	0.848	1
MIPOL1	Amp_19q13.43	0.848	1
MIPOL1	Del_22q13.32	0.848	1
MLL2	Amp_1q21.3	0.848	1
RHOB	20p-Amp	0.848	1
RHOB	5q-Del	0.848	1
RHOB	Amp_2p25.1	0.848	1
RXRA	Amp_13q22.1	0.848	1
TP53	Amp_8q22.3	0.848	1
FAT1	Amp_17q12	0.848	1
17q-Amp	20p-Amp	0.848	1
17q-Amp	5q-Del	0.848	1
17q-Amp	Amp_2p25.1	0.848	1
17q-Amp	Del_22q13.32	0.848	1
20q-Amp	Amp_17q12	0.848	1
20q-Amp	Amp_22q12.2	0.848	1
3p-Amp	Amp_19q13.43	0.848	1
7q-Amp	Amp_13q22.1	0.848	1
14q-Del	Amp_19q13.43	0.848	1
15q-Del	Amp_2p25.1	0.848	1
15q-Del	Del_6p25.3	0.848	1
4q-Del	Amp_11p13	0.848	1
5q-Del	Del_1p36.11	0.848	1
6q-Del	Amp_8q22.3	0.848	1
Amp_1p34.2	Del_7q36.3	0.848	1
Amp_2p25.1	Del_1p36.11	0.848	1
Amp_11p13	Amp_16p11.2	0.848	1
Amp_16p11.2	Del_7q36.3	0.848	1
Amp_17q11.2	Del_14q24.1	0.848	1
Amp_19q13.43	Del_1p36.11	0.848	1
Del_1p36.11	Del_6p25.3	0.848	1
Del_1p36.11	Del_22q13.32	0.848	1
CDKN1A	4q-Del	0.849	1
FOXQ1	Amp_20q11.21	0.849	1
KLF5	11q-Del	0.849	1
KLF5	Amp_17q23.3	0.849	1
KLF5	Del_10q23.31	0.849	1
PIK3CA	RHOB	0.849	1
PIK3CA	14q-Del	0.849	1
PIK3CA	15q-Del	0.849	1
RHOB	Amp_20q11.21	0.849	1
RHOB	Del_9q33.2	0.849	1
3p-Amp	Amp_20q11.21	0.849	1
11q-Del	4q-Del	0.849	1
4p-Del	Amp_5p15.33	0.849	1
4q-Del	Del_6q27	0.849	1
4q-Del	Del_10q23.31	0.849	1
Amp_1p34.2	Amp_17q23.3	0.849	1
Amp_3p25.2	Amp_17q12	0.849	1
Amp_5p15.33	Amp_17q12	0.849	1
Amp_8p11.23	Amp_16p11.2	0.849	1
Amp_16p11.2	Del_6q27	0.849	1
Amp_20q11.21	Del_1p36.11	0.849	1
ASXL2	Del_13q14.2	0.85	1
CX3CL1	PHLDA3	0.85	1
CX3CL1	RAD51C	0.85	1
CX3CL1	19q-Amp	0.85	1
CX3CL1	Amp_6q21	0.85	1
CX3CL1	Amp_6q23.3	0.85	1
CX3CL1	Del_1q32.1	0.85	1
CX3CL1	Del_Xq21.33	0.85	1
PHLDA3	CEP192	0.85	1
PHLDA3	1q-Amp	0.85	1
PHLDA3	16p-Del	0.85	1
PHLDA3	Amp_16q22.1	0.85	1
ACRC	CEP192	0.85	1
ACRC	ECM1	0.85	1
ACRC	1q-Amp	0.85	1
ACRC	16p-Del	0.85	1
ACRC	Amp_16q22.1	0.85	1
CEP192	19q-Amp	0.85	1
CEP192	Amp_6q21	0.85	1
CEP192	Amp_6q23.3	0.85	1
CEP192	Del_1q32.1	0.85	1
CEP192	Del_9p21.3	0.85	1
CEP192	Del_Xq21.33	0.85	1
ECM1	RAD51C	0.85	1
ECM1	19q-Amp	0.85	1
ECM1	Amp_6q21	0.85	1
ECM1	Amp_6q23.3	0.85	1
ECM1	Del_1q32.1	0.85	1
ECM1	Del_Xq21.33	0.85	1
RAD51C	1q-Amp	0.85	1
RAD51C	16p-Del	0.85	1
RAD51C	Amp_16q22.1	0.85	1
19q-Amp	1q-Amp	0.85	1
19q-Amp	16p-Del	0.85	1
1q-Amp	Amp_6q21	0.85	1
1q-Amp	Amp_6q23.3	0.85	1
1q-Amp	Del_1q32.1	0.85	1
16p-Del	Amp_6q21	0.85	1
16p-Del	Amp_6q23.3	0.85	1
16p-Del	Del_1q32.1	0.85	1
17p-Del	Amp_16p13.2	0.85	1
Amp_6q21	Amp_16q22.1	0.85	1
Amp_6q23.3	Amp_16q22.1	0.85	1
Amp_16q22.1	Del_Xq21.33	0.85	1
ASXL2	4q-Del	0.851	1
ASXL2	Amp_1p34.2	0.851	1
ASXL2	Amp_16p11.2	0.851	1
KLF5	RBM26	0.851	1
22q-Del	4q-Del	0.851	1
BTG2	20q-Amp	0.852	1
BTG2	Amp_17q11.2	0.852	1
CDKN1A	Del_11q25	0.852	1
EP300	Amp_17q23.3	0.852	1
HRAS	Amp_17q11.2	0.852	1
ZFP36L1	FAT1	0.852	1
ZFP36L1	Amp_17q11.2	0.852	1
20q-Amp	Amp_4q13.3	0.852	1
9q-Del	Amp_8p11.23	0.852	1
9q-Del	Amp_17q23.3	0.852	1
9q-Del	Del_6q27	0.852	1
Amp_3q26.33	Del_10q23.31	0.852	1
Amp_4q13.3	Amp_13q22.1	0.852	1
Amp_7p21.1	Amp_17q23.3	0.852	1
Amp_17q23.3	Del_5q12.1	0.852	1
Amp_19q12	Del_18q23	0.852	1
Del_10q23.31	Del_11q23.3	0.852	1
ASXL2	KDM6A	0.853	1
CDKN1A	CX3CL1	0.853	1
CDKN1A	CEP192	0.853	1
KDM6A	19p-Del	0.853	1
CEP192	Amp_8p11.23	0.853	1
CEP192	Del_3p14.2	0.853	1
CEP192	Del_10q23.31	0.853	1
RBM26	Del_9p23	0.853	1
1q-Amp	11q-Del	0.853	1
1q-Amp	Amp_8p11.23	0.853	1
1q-Amp	Del_3p14.2	0.853	1
1q-Amp	Del_6q27	0.853	1
16p-Del	Amp_8p11.23	0.853	1
19p-Del	Amp_1q21.3	0.853	1
19p-Del	Del_9p23	0.853	1
22q-Del	Del_9p23	0.853	1
Amp_1q21.3	Del_Xp11.3	0.853	1
Amp_16q22.1	Amp_17q23.3	0.853	1
Amp_16q22.1	Del_3p14.2	0.853	1
Amp_16q22.1	Del_6q27	0.853	1
Amp_16q22.1	Del_10q23.31	0.853	1
Del_9p23	Del_Xp11.3	0.853	1
ARID1A	Amp_19q12	0.854	1
NFE2L2	11p-Del	0.855	1
TSC1	11p-Del	0.855	1
3q-Amp	11p-Del	0.855	1
7p-Amp	8p-Del	0.855	1
10q-Del	Amp_10p14	0.855	1
11p-Del	Del_2q22.1	0.855	1
8p-Del	Del_2q22.1	0.855	1
Amp_10p14	Del_15q13.1	0.855	1
CREBBP	TSC1	0.856	1
CREBBP	3q-Amp	0.856	1
CREBBP	10q-Del	0.856	1
CREBBP	Amp_4p16.3	0.856	1
ELF3	ERCC2	0.856	1
ELF3	5p-Amp	0.856	1
EP300	20p-Amp	0.856	1
EP300	6q-Del	0.856	1
EP300	Del_22q13.32	0.856	1
ERCC2	TSC1	0.856	1
ERCC2	3q-Amp	0.856	1
ERCC2	10q-Del	0.856	1
ERCC2	Amp_4p16.3	0.856	1
ERCC2	Del_4q22.1	0.856	1
FGFR3	NFE2L2	0.856	1
MLL2	Del_2q37.1	0.856	1
TSC1	Amp_12q15	0.856	1
TSC1	Del_4q34.2	0.856	1
TSC1	Del_19p13.3	0.856	1
20p-Amp	Amp_7p21.1	0.856	1
3q-Amp	Amp_12q15	0.856	1
3q-Amp	Del_19p13.3	0.856	1
5p-Amp	10q-Del	0.856	1
5p-Amp	Del_4q22.1	0.856	1
5p-Amp	Del_15q13.1	0.856	1
7p-Amp	Amp_12q15	0.856	1
7p-Amp	Del_4q34.2	0.856	1
5q-Del	9q-Del	0.856	1
5q-Del	Del_11q25	0.856	1
6q-Del	9q-Del	0.856	1
6q-Del	Amp_3q26.33	0.856	1
6q-Del	Del_5q12.1	0.856	1
9q-Del	Amp_2p25.1	0.856	1
Amp_2p25.1	Del_11q23.3	0.856	1
Amp_3q26.33	Del_8p23.1	0.856	1
Amp_4p16.3	Del_4q34.2	0.856	1
Amp_7p21.1	Del_6p25.3	0.856	1
Amp_12q15	Del_2q22.1	0.856	1
Amp_12q15	Del_15q13.1	0.856	1
Del_2q22.1	Del_19p13.3	0.856	1
Del_4q22.1	Del_19p13.3	0.856	1
Del_15q13.1	Del_19p13.3	0.856	1
BTG2	Del_11p15.5	0.857	1
ELF3	TPTE	0.857	1
ELF3	TXNIP	0.857	1
ELF3	Del_12p13.1	0.857	1
ERCC2	Del_16p13.3	0.857	1
GPC5	NFE2L2	0.857	1
GPC5	TSC1	0.857	1
GPC5	7p-Amp	0.857	1
GPC5	10q-Del	0.857	1
GPC5	Del_2q22.1	0.857	1
GPC5	Del_15q13.1	0.857	1
NFE2L2	TPTE	0.857	1
RB1	Del_18q23	0.857	1
TPTE	7p-Amp	0.857	1
TPTE	Amp_4p16.3	0.857	1
TPTE	Del_4q22.1	0.857	1
TXNIP	TSC1	0.857	1
TXNIP	Amp_4p16.3	0.857	1
TXNIP	Del_2q22.1	0.857	1
TXNIP	Del_4q22.1	0.857	1
TXNIP	Del_15q13.1	0.857	1
TSC1	Amp_12p12.1	0.857	1
TSC1	Del_12p13.1	0.857	1
MLL	5p-Amp	0.857	1
MLL	Del_18q23	0.857	1
20q-Amp	8p-Del	0.857	1
3q-Amp	Del_12p13.1	0.857	1
7p-Amp	Amp_9p24.1	0.857	1
7p-Amp	Amp_12p12.1	0.857	1
10q-Del	Del_12p13.1	0.857	1
8p-Del	Amp_13q22.1	0.857	1
Amp_4p16.3	Amp_9p24.1	0.857	1
Amp_7p11.2	Del_13q14.2	0.857	1
Amp_10p14	Amp_13q22.1	0.857	1
Amp_10p14	Amp_17q11.2	0.857	1
Amp_11q13.3	Del_4q34.2	0.857	1
Amp_12p12.1	Del_2q22.1	0.857	1
Amp_12q15	Del_2q34	0.857	1
Amp_19q12	Del_2q34	0.857	1
TP53	Amp_3p25.2	0.858	1
GPC5	Amp_19q12	0.859	1
TXNIP	Del_18q23	0.859	1
Amp_3q26.33	Amp_6p22.3	0.859	1
Del_12p13.1	Del_18q23	0.859	1
CDKN1A	18q-Del	0.86	1
FOXQ1	Amp_1q23.3	0.86	1
MIPOL1	Amp_1q23.3	0.86	1
FAT1	Del_3p14.2	0.86	1
20q-Amp	Amp_8p11.23	0.86	1
20q-Amp	Amp_17q23.3	0.86	1
3p-Amp	Amp_1q23.3	0.86	1
15q-Del	Amp_1q23.3	0.86	1
18q-Del	Del_3p14.2	0.86	1
Amp_1q23.3	Del_1p36.11	0.86	1
Amp_8p11.23	Amp_13q22.1	0.86	1
Amp_8q22.3	Amp_16p11.2	0.86	1
Amp_17q11.2	Del_3p14.2	0.86	1
ARID1A	Amp_13q22.1	0.861	1
ARID1A	Amp_17q11.2	0.861	1
18q-Del	Amp_5p15.33	0.861	1
19p-Del	Del_11p15.5	0.861	1
Amp_3p25.2	Amp_17q11.2	0.861	1
Amp_6p22.3	Del_17p12	0.861	1
Amp_17q23.3	Del_8p23.1	0.861	1
ACRC	Amp_19q12	0.862	1
RAD51C	Amp_19q12	0.862	1
RAD51C	Del_18q23	0.862	1
19q-Amp	Del_18q23	0.862	1
Amp_6q23.3	Amp_19q12	0.862	1
Amp_6q23.3	Del_18q23	0.862	1
Amp_19q12	Del_1q32.1	0.862	1
Amp_19q12	Del_Xq21.33	0.862	1
Del_18q23	Del_Xq21.33	0.862	1
ASXL2	Amp_11p13	0.863	1
ASXL2	Del_7q36.3	0.863	1
CDKN2A	11p-Del	0.863	1
CDKN2A	9p-Del	0.863	1
FOXA1	11p-Del	0.863	1
FOXA1	Amp_10p14	0.863	1
FOXQ1	Amp_10p14	0.863	1
RHOB	8p-Del	0.863	1
RHOB	9p-Del	0.863	1
RHOB	Amp_10p14	0.863	1
RBM26	Amp_11p13	0.863	1
17q-Amp	8p-Del	0.863	1
17q-Amp	Amp_10p14	0.863	1
11p-Del	Del_1p36.11	0.863	1
15q-Del	9p-Del	0.863	1
22q-Del	Amp_11p13	0.863	1
22q-Del	Del_7q36.3	0.863	1
9p-Del	Del_1p36.11	0.863	1
Amp_1q23.3	Del_9q33.2	0.863	1
Amp_11p13	Amp_16p13.2	0.863	1
Amp_16p13.2	Del_7q36.3	0.863	1
BTG2	19p-Del	0.864	1
BTG2	Del_Xp11.3	0.864	1
HRAS	19p-Del	0.864	1
HRAS	Del_Xp11.3	0.864	1
KDM6A	PIK3CA	0.864	1
RB1	Amp_6p22.3	0.864	1
ZFP36L1	19p-Del	0.864	1
ZFP36L1	Del_Xp11.3	0.864	1
MLL	Amp_6p22.3	0.864	1
19p-Del	Amp_4q13.3	0.864	1
19p-Del	Amp_11q22.2	0.864	1
Amp_4q13.3	Del_Xp11.3	0.864	1
Amp_6p22.3	Del_2q34	0.864	1
Amp_6p22.3	Del_16p13.3	0.864	1
Amp_11q22.2	Del_Xp11.3	0.864	1
Amp_20q11.21	Del_9p23	0.864	1
KDM6A	Amp_17q12	0.865	1
7q-Amp	Del_9p23	0.865	1
Amp_1q21.3	Amp_17q12	0.865	1
EP300	Del_17p12	0.866	1
CX3CL1	RB1	0.867	1
CX3CL1	MLL	0.867	1
MLL2	Amp_9p24.1	0.867	1
RB1	CEP192	0.867	1
RB1	ECM1	0.867	1
CEP192	MLL	0.867	1
CEP192	Del_2q34	0.867	1
ECM1	Del_16p13.3	0.867	1
MLL	1q-Amp	0.867	1
MLL	Amp_16q22.1	0.867	1
RBM26	Del_11p15.5	0.867	1
1q-Amp	Del_2q34	0.867	1
16p-Del	Amp_11q13.3	0.867	1
16p-Del	Del_2q34	0.867	1
Amp_16q22.1	Del_2q34	0.867	1
CDKN2A	FBXW7	0.868	1
CDKN2A	Del_14q24.1	0.868	1
FOXA1	7q-Amp	0.868	1
FOXA1	Amp_17q12	0.868	1
FOXA1	Amp_22q12.2	0.868	1
FOXQ1	RXRA	0.868	1
FOXQ1	4p-Del	0.868	1
FOXQ1	Amp_17q12	0.868	1
GPC5	TP53	0.868	1
KLF5	Amp_11q13.3	0.868	1
MIPOL1	RXRA	0.868	1
RB1	Amp_1p34.2	0.868	1
RB1	Amp_16p11.2	0.868	1
RHOB	Del_14q24.1	0.868	1
RXRA	17q-Amp	0.868	1
RXRA	3p-Amp	0.868	1
TP53	Del_12p13.1	0.868	1
17q-Amp	7q-Amp	0.868	1
3p-Amp	7q-Amp	0.868	1
3p-Amp	Amp_17q12	0.868	1
7q-Amp	14q-Del	0.868	1
14q-Del	4p-Del	0.868	1
14q-Del	Amp_17q12	0.868	1
14q-Del	Amp_22q12.2	0.868	1
15q-Del	4p-Del	0.868	1
15q-Del	Amp_22q12.2	0.868	1
4q-Del	Amp_11q13.3	0.868	1
4q-Del	Del_2q34	0.868	1
4q-Del	Del_16p13.3	0.868	1
Amp_1p34.2	Del_16p13.3	0.868	1
Amp_1q23.3	Amp_17q12	0.868	1
Amp_16p11.2	Del_2q34	0.868	1
BTG2	STAG2	0.869	1
ERBB3	HRAS	0.869	1
ERBB3	ZFP36L1	0.869	1
HRAS	STAG2	0.869	1
HRAS	Del_16q23.1	0.869	1
SPTAN1	ZFP36L1	0.869	1
ZFP36L1	Del_16q23.1	0.869	1
8q-Amp	Amp_4q13.3	0.869	1
5q-Del	Amp_19q13.43	0.869	1
5q-Del	Del_6p25.3	0.869	1
6q-Del	Amp_2p25.1	0.869	1
Amp_19q13.43	Del_22q13.32	0.869	1
Del_6p25.3	Del_22q13.32	0.869	1
ARID1A	Amp_10p14	0.87	1
ERBB3	7q-Amp	0.871	1
ERBB3	Del_14q24.1	0.871	1
FBXW7	8q-Amp	0.871	1
FOXQ1	Del_8p23.1	0.871	1
MIPOL1	Del_8p23.1	0.871	1
RXRA	8q-Amp	0.871	1
RXRA	Del_16q23.1	0.871	1
SPTAN1	Del_14q24.1	0.871	1
STAG2	4p-Del	0.871	1
STAG2	Del_14q24.1	0.871	1
TP53	20q-Amp	0.871	1
TP53	18q-Del	0.871	1
TP53	Amp_17q11.2	0.871	1
17q-Amp	Del_8p23.1	0.871	1
7q-Amp	8q-Amp	0.871	1
7q-Amp	Del_16q23.1	0.871	1
7q-Amp	Del_18q23	0.871	1
8q-Amp	Del_14q24.1	0.871	1
Amp_17q12	Amp_19q12	0.871	1
Del_1p36.11	Del_8p23.1	0.871	1
11q-Del	Amp_20q11.21	0.872	1
Del_3p14.2	Del_9q33.2	0.872	1
EP300	RAD51C	0.873	1
EP300	Amp_6q21	0.873	1
EP300	Del_Xq21.33	0.873	1
MLL2	Amp_11q13.3	0.873	1
PHLDA3	Amp_7p21.1	0.873	1
PIK3CA	8q-Amp	0.873	1
PIK3CA	Del_16q23.1	0.873	1
SPTAN1	Amp_20q11.21	0.873	1
STAG2	Amp_20q11.21	0.873	1
STAG2	Del_9q33.2	0.873	1
ACRC	9q-Del	0.873	1
ACRC	Amp_3q26.33	0.873	1
ACRC	Del_11q23.3	0.873	1
ACRC	Del_11q25	0.873	1
RAD51C	Amp_3q26.33	0.873	1
RAD51C	Amp_7p21.1	0.873	1
19q-Amp	9q-Del	0.873	1
19q-Amp	Del_5q12.1	0.873	1
19q-Amp	Del_11q23.3	0.873	1
19q-Amp	Del_11q25	0.873	1
Amp_3q26.33	Amp_6q21	0.873	1
Amp_3q26.33	Del_1q32.1	0.873	1
Amp_6q21	Del_5q12.1	0.873	1
Amp_6q23.3	Amp_7p21.1	0.873	1
Amp_6q23.3	Del_5q12.1	0.873	1
Amp_6q23.3	Del_11q25	0.873	1
Del_1q32.1	Del_11q25	0.873	1
Del_5q12.1	Del_Xq21.33	0.873	1
EP300	TXNIP	0.874	1
TPTE	Amp_7p21.1	0.874	1
TXNIP	Amp_3q26.33	0.874	1
TXNIP	Del_5q12.1	0.874	1
11q-Del	Amp_3p25.2	0.874	1
Amp_3p25.2	Del_6q27	0.874	1
Amp_3q26.33	Amp_12p12.1	0.874	1
Amp_7p11.2	Amp_8q22.3	0.874	1
Amp_8q22.3	Del_11p15.5	0.874	1
Amp_12p12.1	Del_11q25	0.874	1
CDKN1A	Del_13q14.2	0.875	1
Amp_3q26.33	Amp_8q22.3	0.875	1
Amp_8q22.3	Del_5q12.1	0.875	1
Amp_17q23.3	Del_13q14.2	0.875	1
Amp_20q11.21	Del_18q23	0.875	1
Del_9q33.2	Del_18q23	0.875	1
ASXL2	RBM26	0.876	1
FOXA1	Del_2q37.1	0.876	1
FOXQ1	Amp_7p11.2	0.876	1
FOXQ1	Del_2q37.1	0.876	1
MIPOL1	Del_2q37.1	0.876	1
RHOB	Del_2q37.1	0.876	1
17q-Amp	Amp_7p11.2	0.876	1
17q-Amp	Del_2q37.1	0.876	1
3p-Amp	Del_2q37.1	0.876	1
14q-Del	Amp_7p11.2	0.876	1
15q-Del	Del_2q37.1	0.876	1
17p-Del	Del_6p25.3	0.876	1
Amp_19q13.43	Del_13q14.2	0.876	1
Del_1p36.11	Del_2q37.1	0.876	1
Del_13q14.2	Del_22q13.32	0.876	1
ELF3	FAT1	0.877	1
FAT1	10q-Del	0.877	1
FAT1	Del_2q37.1	0.877	1
20q-Amp	Del_2q22.1	0.877	1
20q-Amp	Del_4q22.1	0.877	1
7p-Amp	18q-Del	0.877	1
7p-Amp	Amp_13q22.1	0.877	1
Amp_13q22.1	Del_2q37.1	0.877	1
Amp_13q22.1	Del_4q22.1	0.877	1
Amp_17q11.2	Del_4q22.1	0.877	1
EP300	Del_18q23	0.878	1
GPC5	Amp_11p13	0.878	1
GPC5	Del_7q36.3	0.878	1
PHLDA3	ACRC	0.878	1
PHLDA3	RAD51C	0.878	1
PHLDA3	19q-Amp	0.878	1
PHLDA3	Amp_6q21	0.878	1
PHLDA3	Amp_6q23.3	0.878	1
PHLDA3	Del_1q32.1	0.878	1
PHLDA3	Del_Xq21.33	0.878	1
TPTE	Amp_11p13	0.878	1
TPTE	Del_7q36.3	0.878	1
TXNIP	Amp_11p13	0.878	1
TXNIP	Del_7q36.3	0.878	1
ACRC	RAD51C	0.878	1
ACRC	19q-Amp	0.878	1
ACRC	Amp_6q21	0.878	1
ACRC	Amp_6q23.3	0.878	1
ACRC	Del_1q32.1	0.878	1
ACRC	Del_Xq21.33	0.878	1
RAD51C	19q-Amp	0.878	1
RAD51C	Amp_6q23.3	0.878	1
RAD51C	Del_1q32.1	0.878	1
RAD51C	Del_Xq21.33	0.878	1
19q-Amp	Amp_6q21	0.878	1
19q-Amp	Amp_6q23.3	0.878	1
19q-Amp	Del_Xq21.33	0.878	1
18q-Del	Amp_1q21.3	0.878	1
Amp_6p22.3	Del_Xp11.3	0.878	1
Amp_6q21	Amp_6q23.3	0.878	1
Amp_6q21	Del_1q32.1	0.878	1
Amp_6q21	Del_Xq21.33	0.878	1
Amp_6q23.3	Del_1q32.1	0.878	1
Amp_6q23.3	Del_Xq21.33	0.878	1
Amp_7p21.1	Del_18q23	0.878	1
Amp_9p24.1	Del_7q36.3	0.878	1
Amp_11p13	Amp_12p12.1	0.878	1
Amp_11p13	Del_12p13.1	0.878	1
Amp_12p12.1	Del_7q36.3	0.878	1
Del_1q32.1	Del_Xq21.33	0.878	1
Del_7q36.3	Del_12p13.1	0.878	1
Del_11q25	Del_18q23	0.878	1
BTG2	Amp_6p22.3	0.879	1
GPC5	KLF5	0.879	1
KLF5	TPTE	0.879	1
KLF5	TXNIP	0.879	1
KLF5	Amp_9p24.1	0.879	1
KLF5	Amp_20q11.21	0.879	1
TPTE	4q-Del	0.879	1
TPTE	Amp_16p11.2	0.879	1
TXNIP	4q-Del	0.879	1
MLL	Amp_3q26.33	0.879	1
MLL	Amp_7p21.1	0.879	1
4q-Del	Del_9p21.3	0.879	1
4q-Del	Del_9q33.2	0.879	1
9q-Del	Del_16p13.3	0.879	1
Amp_1p34.2	Del_12p13.1	0.879	1
Amp_3q26.33	Amp_11q13.3	0.879	1
Amp_3q26.33	Del_2q34	0.879	1
Amp_7p21.1	Del_2q34	0.879	1
Amp_9p24.1	Del_17p12	0.879	1
Amp_12p12.1	Amp_16p11.2	0.879	1
Amp_16p11.2	Del_12p13.1	0.879	1
Del_2q34	Del_5q12.1	0.879	1
RXRA	Del_11p15.5	0.88	1
CREBBP	CX3CL1	0.881	1
CREBBP	CEP192	0.881	1
CREBBP	16p-Del	0.881	1
CREBBP	Del_19p13.3	0.881	1
CX3CL1	ERCC2	0.881	1
CX3CL1	Amp_12q15	0.881	1
CX3CL1	Del_19p13.3	0.881	1
ERCC2	CEP192	0.881	1
ERCC2	5p-Amp	0.881	1
FGFR3	CEP192	0.881	1
FGFR3	1q-Amp	0.881	1
FGFR3	Del_19p13.3	0.881	1
FOXQ1	Amp_8q22.3	0.881	1
MIPOL1	Amp_8q22.3	0.881	1
MLL2	1q-Amp	0.881	1
RHOB	Amp_8q22.3	0.881	1
TP53	19p-Del	0.881	1
CEP192	Del_4q34.2	0.881	1
1q-Amp	Amp_12q15	0.881	1
5p-Amp	16p-Del	0.881	1
5p-Amp	Del_4q34.2	0.881	1
16p-Del	Amp_12q15	0.881	1
Amp_3p25.2	Del_8p23.1	0.881	1
Amp_8q22.3	Del_1p36.11	0.881	1
Amp_16q22.1	Del_19p13.3	0.881	1
Amp_20q11.21	Del_9q33.2	0.881	1
MLL	Amp_13q22.1	0.882	1
20q-Amp	Amp_11q13.3	0.882	1
18q-Del	Del_2q34	0.882	1
PHLDA3	17p-Del	0.883	1
PHLDA3	Del_13q14.2	0.883	1
SPTAN1	Del_17p12	0.883	1
STAG2	Del_17p12	0.883	1
ACRC	Del_13q14.2	0.883	1
RAD51C	17p-Del	0.883	1
8q-Amp	Del_17p12	0.883	1
17p-Del	Del_Xq21.33	0.883	1
Amp_6q23.3	Del_13q14.2	0.883	1
ASXL2	CDKN1A	0.884	1
ASXL2	11q-Del	0.884	1
ASXL2	Amp_8p11.23	0.884	1
ASXL2	Amp_17q23.3	0.884	1
CDKN1A	22q-Del	0.884	1
CDKN1A	Amp_16p13.2	0.884	1
RBM26	Amp_8p11.23	0.884	1
RBM26	Amp_17q23.3	0.884	1
11q-Del	22q-Del	0.884	1
22q-Del	Amp_8p11.23	0.884	1
Amp_16p13.2	Del_6q27	0.884	1
Amp_16p13.2	Del_10q23.31	0.884	1
ARID1A	Amp_6p22.3	0.885	1
BTG2	20p-Amp	0.885	1
BTG2	5q-Del	0.885	1
BTG2	6q-Del	0.885	1
BTG2	Amp_19q13.43	0.885	1
BTG2	Del_6p25.3	0.885	1
HRAS	Amp_19q13.43	0.885	1
HRAS	Del_6p25.3	0.885	1
HRAS	Del_22q13.32	0.885	1
TP53	5q-Del	0.885	1
TP53	6q-Del	0.885	1
TP53	Del_6p25.3	0.885	1
ZFP36L1	6q-Del	0.885	1
ZFP36L1	Amp_19q13.43	0.885	1
Amp_2p25.1	Amp_11q22.2	0.885	1
Amp_4q13.3	Del_22q13.32	0.885	1
Amp_5p15.33	Amp_6p22.3	0.885	1
Amp_11q22.2	Amp_19q13.43	0.885	1
Amp_11q22.2	Del_6p25.3	0.885	1
Amp_11q22.2	Del_22q13.32	0.885	1
ARID1A	Amp_3q26.33	0.886	1
ARID1A	Del_11q23.3	0.886	1
ARID1A	Del_11q25	0.886	1
CREBBP	Amp_1p34.2	0.886	1
CX3CL1	19p-Del	0.886	1
CX3CL1	Del_Xp11.3	0.886	1
FGFR3	KLF5	0.886	1
KLF5	Amp_12q15	0.886	1
CEP192	Del_Xp11.3	0.886	1
ECM1	19p-Del	0.886	1
ECM1	Del_Xp11.3	0.886	1
1q-Amp	19p-Del	0.886	1
5p-Amp	4q-Del	0.886	1
5p-Amp	Amp_1p34.2	0.886	1
16p-Del	19p-Del	0.886	1
16p-Del	Del_Xp11.3	0.886	1
19p-Del	Amp_16q22.1	0.886	1
4q-Del	Amp_12q15	0.886	1
4q-Del	Del_19p13.3	0.886	1
Amp_3p25.2	Del_5q12.1	0.886	1
Amp_19q12	Del_19p13.3	0.886	1
CDKN2A	ELF3	0.887	1
CDKN2A	TSC1	0.887	1
CDKN2A	3q-Amp	0.887	1
CDKN2A	7p-Amp	0.887	1
CDKN2A	10q-Del	0.887	1
CDKN2A	Amp_4p16.3	0.887	1
CDKN2A	Del_4q22.1	0.887	1
ELF3	FOXA1	0.887	1
ELF3	FOXQ1	0.887	1
ELF3	17q-Amp	0.887	1
ELF3	14q-Del	0.887	1
ERBB3	Amp_17q23.3	0.887	1
FOXA1	TSC1	0.887	1
FOXA1	3q-Amp	0.887	1
FOXA1	10q-Del	0.887	1
FOXA1	Del_2q22.1	0.887	1
FOXA1	Del_4q22.1	0.887	1
FOXQ1	TSC1	0.887	1
FOXQ1	3q-Amp	0.887	1
FOXQ1	Del_2q22.1	0.887	1
FOXQ1	Del_4q22.1	0.887	1
KDM6A	Amp_1q23.3	0.887	1
MIPOL1	TSC1	0.887	1
NFE2L2	RHOB	0.887	1
NFE2L2	15q-Del	0.887	1
RHOB	3q-Amp	0.887	1
RHOB	Amp_4p16.3	0.887	1
RHOB	Del_15q13.1	0.887	1
SPTAN1	11q-Del	0.887	1
SPTAN1	Del_3p14.2	0.887	1
STAG2	11q-Del	0.887	1
STAG2	Del_3p14.2	0.887	1
TSC1	17q-Amp	0.887	1
TSC1	14q-Del	0.887	1
TSC1	15q-Del	0.887	1
17q-Amp	Del_2q22.1	0.887	1
17q-Amp	Del_4q22.1	0.887	1
17q-Amp	Del_15q13.1	0.887	1
3p-Amp	7p-Amp	0.887	1
3p-Amp	Amp_4p16.3	0.887	1
3q-Amp	Del_1p36.11	0.887	1
7p-Amp	14q-Del	0.887	1
8q-Amp	Del_3p14.2	0.887	1
8q-Amp	Del_6q27	0.887	1
14q-Del	Del_2q22.1	0.887	1
14q-Del	Del_4q22.1	0.887	1
14q-Del	Del_15q13.1	0.887	1
15q-Del	Del_2q22.1	0.887	1
15q-Del	Del_4q22.1	0.887	1
Amp_17q23.3	Del_16q23.1	0.887	1
Amp_20q11.21	Del_11p15.5	0.887	1
Del_1p36.11	Del_2q22.1	0.887	1
Del_1p36.11	Del_15q13.1	0.887	1
Del_3p14.2	Del_16q23.1	0.887	1
EP300	4p-Del	0.888	1
EP300	Amp_22q12.2	0.888	1
EP300	Del_14q24.1	0.888	1
RXRA	Del_11q23.3	0.888	1
RXRA	Del_11q25	0.888	1
TPTE	Del_13q14.2	0.888	1
TXNIP	17p-Del	0.888	1
17p-Del	Amp_12p12.1	0.888	1
4p-Del	9q-Del	0.888	1
Amp_6p22.3	Del_13q14.2	0.888	1
Amp_17q12	Del_11q25	0.888	1
Amp_22q12.2	Del_5q12.1	0.888	1
Amp_22q12.2	Del_11q25	0.888	1
Del_11q25	Del_14q24.1	0.888	1
CX3CL1	Del_17p12	0.89	1
ERBB3	11p-Del	0.89	1
ERBB3	9p-Del	0.89	1
STAG2	11p-Del	0.89	1
STAG2	9p-Del	0.89	1
CEP192	Del_17p12	0.89	1
1q-Amp	Del_17p12	0.89	1
Amp_1q23.3	Amp_16p13.2	0.89	1
Amp_11q13.3	Del_17p12	0.89	1
Amp_16q22.1	Del_17p12	0.89	1
ARID1A	TPTE	0.891	1
TPTE	Amp_3p25.2	0.891	1
TPTE	Amp_5p15.33	0.891	1
TXNIP	Amp_3p25.2	0.891	1
Amp_1q23.3	Amp_6p22.3	0.891	1
Amp_5p15.33	Amp_12p12.1	0.891	1
ARID1A	ELF3	0.892	1
ARID1A	TSC1	0.892	1
ARID1A	3q-Amp	0.892	1
ARID1A	Amp_4p16.3	0.892	1
ARID1A	Del_2q22.1	0.892	1
CDKN1A	8p-Del	0.892	1
CDKN2A	Amp_11p13	0.892	1
CDKN2A	Del_7q36.3	0.892	1
FOXA1	Amp_11p13	0.892	1
FOXA1	Del_7q36.3	0.892	1
FOXQ1	Amp_11p13	0.892	1
KDM6A	11p-Del	0.892	1
MIPOL1	Amp_11p13	0.892	1
MIPOL1	Del_7q36.3	0.892	1
RHOB	Amp_11p13	0.892	1
RHOB	Del_7q36.3	0.892	1
17q-Amp	Amp_11p13	0.892	1
17q-Amp	Del_7q36.3	0.892	1
3p-Amp	Amp_11p13	0.892	1
3p-Amp	Del_7q36.3	0.892	1
7p-Amp	Amp_5p15.33	0.892	1
14q-Del	Amp_11p13	0.892	1
14q-Del	Del_7q36.3	0.892	1
15q-Del	Amp_11p13	0.892	1
15q-Del	Del_7q36.3	0.892	1
9p-Del	Del_6q27	0.892	1
9p-Del	Del_10q23.31	0.892	1
Amp_3p25.2	Amp_4p16.3	0.892	1
Amp_3p25.2	Del_15q13.1	0.892	1
Amp_10p14	Del_9p23	0.892	1
Amp_10p14	Del_10q23.31	0.892	1
Amp_11p13	Del_1p36.11	0.892	1
Del_1p36.11	Del_7q36.3	0.892	1
FBXW7	Del_6p25.3	0.893	1
RXRA	Amp_19q13.43	0.893	1
RBM26	Amp_6p22.3	0.893	1
7q-Amp	Amp_19q13.43	0.893	1
22q-Del	Amp_6p22.3	0.893	1
4p-Del	6q-Del	0.893	1
4p-Del	Amp_19q13.43	0.893	1
4p-Del	Del_22q13.32	0.893	1
6q-Del	Amp_22q12.2	0.893	1
Amp_2p25.1	Amp_17q12	0.893	1
Amp_22q12.2	Del_6p25.3	0.893	1
Amp_22q12.2	Del_22q13.32	0.893	1
CX3CL1	FAT1	0.894	1
CX3CL1	20q-Amp	0.894	1
CX3CL1	18q-Del	0.894	1
CX3CL1	Amp_17q11.2	0.894	1
PIK3CA	19p-Del	0.894	1
CEP192	18q-Del	0.894	1
CEP192	Amp_17q11.2	0.894	1
ECM1	18q-Del	0.894	1
18q-Del	Amp_16q22.1	0.894	1
Amp_16q22.1	Amp_17q11.2	0.894	1
Amp_20q11.21	Del_Xp11.3	0.894	1
MLL2	PIK3CA	0.895	1
11p-Del	Amp_1q23.3	0.895	1
Amp_6p22.3	Del_4q34.2	0.895	1
Amp_8q22.3	Del_14q24.1	0.895	1
ELF3	ERBB3	0.896	1
ELF3	SPTAN1	0.896	1
ELF3	STAG2	0.896	1
ERBB3	TSC1	0.896	1
ERBB3	Del_4q22.1	0.896	1
SPTAN1	3q-Amp	0.896	1
STAG2	10q-Del	0.896	1
STAG2	Amp_4p16.3	0.896	1
TSC1	Del_16q23.1	0.896	1
3q-Amp	8q-Amp	0.896	1
8q-Amp	Amp_4p16.3	0.896	1
Amp_12p12.1	Del_9p21.3	0.896	1
Del_2q22.1	Del_16q23.1	0.896	1
STAG2	Amp_1q23.3	0.897	1
19p-Del	Del_9p21.3	0.897	1
8p-Del	Del_18q23	0.897	1
9p-Del	Del_18q23	0.897	1
Amp_1q23.3	Del_16q23.1	0.897	1
ARID1A	ERBB3	0.898	1
SPTAN1	Amp_5p15.33	0.898	1
8q-Amp	Amp_5p15.33	0.898	1
Amp_5p15.33	Amp_7p11.2	0.898	1
ARID1A	CX3CL1	0.899	1
ARID1A	ECM1	0.899	1
ARID1A	1q-Amp	0.899	1
CX3CL1	Amp_3p25.2	0.899	1
RB1	RBM26	0.899	1
RB1	22q-Del	0.899	1
RB1	Amp_16p13.2	0.899	1
22q-Del	Amp_11q13.3	0.899	1
Amp_3p25.2	Amp_16q22.1	0.899	1
Amp_11q13.3	Amp_16p13.2	0.899	1
ASXL2	GPC5	0.9	1
ASXL2	TXNIP	0.9	1
ASXL2	Amp_12p12.1	0.9	1
BTG2	TP53	0.9	1
BTG2	Amp_20q11.21	0.9	1
EP300	Amp_7p21.1	0.9	1
GPC5	22q-Del	0.9	1
HRAS	PIK3CA	0.9	1
PIK3CA	RB1	0.9	1
PIK3CA	ZFP36L1	0.9	1
PIK3CA	MLL	0.9	1
TP53	Amp_4q13.3	0.9	1
TPTE	RBM26	0.9	1
TPTE	Amp_16p13.2	0.9	1
MLL	Amp_20q11.21	0.9	1
RBM26	Del_12p13.1	0.9	1
22q-Del	Amp_9p24.1	0.9	1
22q-Del	Amp_12p12.1	0.9	1
9q-Del	Amp_3q26.33	0.9	1
Amp_3q26.33	Amp_20q11.21	0.9	1
Amp_3q26.33	Del_9q33.2	0.9	1
Amp_7p21.1	Amp_20q11.21	0.9	1
Amp_9p24.1	Amp_16p13.2	0.9	1
Amp_11q13.3	Del_9q33.2	0.9	1
Amp_12p12.1	Amp_16p13.2	0.9	1
Amp_20q11.21	Del_2q34	0.9	1
Amp_20q11.21	Del_11q23.3	0.9	1
Del_5q12.1	Del_11q23.3	0.9	1
Del_5q12.1	Del_11q25	0.9	1
BTG2	RXRA	0.901	1
BTG2	Del_14q24.1	0.901	1
FBXW7	HRAS	0.901	1
FBXW7	ZFP36L1	0.901	1
FBXW7	Amp_11q22.2	0.901	1
GPC5	KDM6A	0.901	1
HRAS	RXRA	0.901	1
HRAS	4p-Del	0.901	1
KDM6A	Del_12p13.1	0.901	1
ZFP36L1	Amp_17q12	0.901	1
11p-Del	Del_Xp11.3	0.901	1
14q-Del	Amp_19q12	0.901	1
19p-Del	8p-Del	0.901	1
4p-Del	Amp_4q13.3	0.901	1
Amp_1q23.3	Del_18q23	0.901	1
Amp_4q13.3	Amp_17q12	0.901	1
Amp_4q13.3	Amp_22q12.2	0.901	1
Amp_4q13.3	Del_14q24.1	0.901	1
Amp_10p14	Del_Xp11.3	0.901	1
Amp_11q13.3	Del_9p21.3	0.901	1
Amp_11q22.2	Amp_22q12.2	0.901	1
Amp_11q22.2	Del_14q24.1	0.901	1
Amp_12p12.1	Del_9p23	0.901	1
Amp_19q12	Del_1p36.11	0.901	1
Del_1p36.11	Del_18q23	0.901	1
Del_9p23	Del_12p13.1	0.901	1
NFE2L2	Del_18q23	0.902	1
TP53	Del_4q22.1	0.902	1
3q-Amp	Del_18q23	0.902	1
Amp_19q12	Del_2q22.1	0.902	1
Amp_19q12	Del_15q13.1	0.902	1
Del_2q22.1	Del_18q23	0.902	1
FGFR3	FAT1	0.903	1
FGFR3	18q-Del	0.903	1
KLF5	20q-Amp	0.903	1
20q-Amp	4q-Del	0.903	1
20q-Amp	Amp_12q15	0.903	1
20q-Amp	Del_19p13.3	0.903	1
11p-Del	Amp_20q11.21	0.903	1
Amp_1p34.2	Amp_17q11.2	0.903	1
Amp_1q23.3	Amp_11p13	0.903	1
Amp_12q15	Amp_13q22.1	0.903	1
Amp_13q22.1	Del_4q34.2	0.903	1
Amp_16p11.2	Amp_17q11.2	0.903	1
Amp_17q11.2	Del_4q34.2	0.903	1
CDKN1A	PHLDA3	0.904	1
CDKN1A	ACRC	0.904	1
CDKN1A	19q-Amp	0.904	1
CDKN1A	Del_1q32.1	0.904	1
CDKN1A	Del_Xq21.33	0.904	1
CREBBP	Amp_7p21.1	0.904	1
ELF3	KDM6A	0.904	1
EP300	Del_4q34.2	0.904	1
EP300	Del_19p13.3	0.904	1
KDM6A	TSC1	0.904	1
KDM6A	3q-Amp	0.904	1
KDM6A	9q-Del	0.904	1
PHLDA3	Del_3p14.2	0.904	1
ACRC	11q-Del	0.904	1
ACRC	Del_6q27	0.904	1
ACRC	Del_10q23.31	0.904	1
RAD51C	Del_6q27	0.904	1
RAD51C	Del_10q23.31	0.904	1
19q-Amp	Amp_8p11.23	0.904	1
19q-Amp	Amp_17q23.3	0.904	1
19q-Amp	Del_3p14.2	0.904	1
19q-Amp	Del_10q23.31	0.904	1
11q-Del	Amp_6q23.3	0.904	1
6q-Del	Del_9q33.2	0.904	1
9q-Del	Amp_1q21.3	0.904	1
9q-Del	Amp_12q15	0.904	1
Amp_1q21.3	Del_5q12.1	0.904	1
Amp_1q21.3	Del_11q25	0.904	1
Amp_6q21	Amp_17q23.3	0.904	1
Amp_6q21	Del_10q23.31	0.904	1
Amp_6q23.3	Amp_8p11.23	0.904	1
Amp_6q23.3	Amp_17q23.3	0.904	1
Amp_6q23.3	Del_3p14.2	0.904	1
Amp_6q23.3	Del_6q27	0.904	1
Amp_6q23.3	Del_10q23.31	0.904	1
Amp_8p11.23	Del_1q32.1	0.904	1
Amp_8p11.23	Del_Xq21.33	0.904	1
Amp_12q15	Del_5q12.1	0.904	1
Amp_12q15	Del_11q23.3	0.904	1
Amp_12q15	Del_11q25	0.904	1
Amp_17q12	Del_13q14.2	0.904	1
Amp_17q23.3	Del_1q32.1	0.904	1
Amp_17q23.3	Del_Xq21.33	0.904	1
Amp_22q12.2	Del_13q14.2	0.904	1
Del_1q32.1	Del_6q27	0.904	1
Del_1q32.1	Del_10q23.31	0.904	1
Del_2q22.1	Del_9p23	0.904	1
Del_4q34.2	Del_11q25	0.904	1
Del_6q27	Del_Xq21.33	0.904	1
Del_10q23.31	Del_Xq21.33	0.904	1
Del_11q23.3	Del_19p13.3	0.904	1
Del_13q14.2	Del_14q24.1	0.904	1
ARID1A	MLL	0.905	1
ARID1A	Del_16p13.3	0.905	1
CDKN2A	KLF5	0.905	1
CDKN2A	4q-Del	0.905	1
ERBB3	Del_2q37.1	0.905	1
FOXA1	KLF5	0.905	1
FOXQ1	KLF5	0.905	1
FOXQ1	4q-Del	0.905	1
KLF5	RHOB	0.905	1
KLF5	17q-Amp	0.905	1
RHOB	Amp_1p34.2	0.905	1
TP53	Del_6q27	0.905	1
17q-Amp	Amp_1p34.2	0.905	1
17q-Amp	Amp_16p11.2	0.905	1
14q-Del	4q-Del	0.905	1
14q-Del	Amp_16p11.2	0.905	1
15q-Del	4q-Del	0.905	1
15q-Del	Amp_1p34.2	0.905	1
Amp_3p25.2	Amp_11q13.3	0.905	1
Amp_3p25.2	Del_2q34	0.905	1
Amp_7p11.2	Del_16q23.1	0.905	1
Amp_16p11.2	Del_1p36.11	0.905	1
ERBB3	Del_2q34	0.906	1
MLL2	5q-Del	0.906	1
MLL2	Del_22q13.32	0.906	1
SPTAN1	Amp_11q13.3	0.906	1
8q-Amp	Amp_11q13.3	0.906	1
4q-Del	Del_2q37.1	0.906	1
Amp_1q21.3	Amp_6p22.3	0.906	1
Amp_16p11.2	Del_2q37.1	0.906	1
BTG2	Amp_11p13	0.907	1
BTG2	Del_7q36.3	0.907	1
CDKN1A	Del_11p15.5	0.907	1
CX3CL1	ERBB3	0.907	1
CX3CL1	KDM6A	0.907	1
CX3CL1	Amp_1q21.3	0.907	1
ERBB3	CEP192	0.907	1
ERBB3	1q-Amp	0.907	1
ERBB3	16p-Del	0.907	1
HRAS	Amp_11p13	0.907	1
HRAS	Del_7q36.3	0.907	1
KDM6A	ECM1	0.907	1
SPTAN1	CEP192	0.907	1
SPTAN1	16p-Del	0.907	1
SPTAN1	Amp_16q22.1	0.907	1
STAG2	Amp_16q22.1	0.907	1
ZFP36L1	Amp_11p13	0.907	1
ZFP36L1	Del_7q36.3	0.907	1
CEP192	Amp_1q21.3	0.907	1
CEP192	Del_9p23	0.907	1
ECM1	8q-Amp	0.907	1
ECM1	Del_16q23.1	0.907	1
1q-Amp	8q-Amp	0.907	1
1q-Amp	Del_16q23.1	0.907	1
8q-Amp	16p-Del	0.907	1
16p-Del	Del_9p23	0.907	1
Amp_4q13.3	Amp_11p13	0.907	1
Amp_4q13.3	Del_7q36.3	0.907	1
Amp_8p11.23	Del_11p15.5	0.907	1
Amp_11p13	Amp_11q22.2	0.907	1
Amp_11q22.2	Del_7q36.3	0.907	1
Amp_16q22.1	Del_9p23	0.907	1
PHLDA3	19p-Del	0.908	1
PHLDA3	Del_Xp11.3	0.908	1
ACRC	19p-Del	0.908	1
ACRC	Amp_1q23.3	0.908	1
ACRC	Del_Xp11.3	0.908	1
RAD51C	19p-Del	0.908	1
RAD51C	Del_Xp11.3	0.908	1
19q-Amp	19p-Del	0.908	1
19q-Amp	Amp_1q23.3	0.908	1
19q-Amp	Del_Xp11.3	0.908	1
19p-Del	Amp_6q21	0.908	1
19p-Del	Amp_6q23.3	0.908	1
19p-Del	Del_1q32.1	0.908	1
19p-Del	Del_Xq21.33	0.908	1
Amp_1q23.3	Amp_6q21	0.908	1
Amp_6p22.3	Del_14q24.1	0.908	1
Amp_6q21	Del_Xp11.3	0.908	1
Amp_6q23.3	Del_Xp11.3	0.908	1
Del_1q32.1	Del_Xp11.3	0.908	1
Del_Xp11.3	Del_Xq21.33	0.908	1
19p-Del	Del_2q37.1	0.909	1
Del_2q37.1	Del_Xp11.3	0.909	1
BTG2	11p-Del	0.91	1
BTG2	9p-Del	0.91	1
HRAS	Amp_10p14	0.91	1
CDKN1A	5q-Del	0.911	1
CDKN1A	Del_22q13.32	0.911	1
ERBB3	KDM6A	0.911	1
ERBB3	Del_9p23	0.911	1
GPC5	Del_11p15.5	0.911	1
KDM6A	8q-Amp	0.911	1
SPTAN1	Amp_1q21.3	0.911	1
20p-Amp	Amp_8p11.23	0.911	1
20p-Amp	Del_3p14.2	0.911	1
20p-Amp	Del_6q27	0.911	1
8q-Amp	Amp_1q21.3	0.911	1
11q-Del	Del_6p25.3	0.911	1
5q-Del	Amp_17q23.3	0.911	1
Amp_2p25.1	Del_3p14.2	0.911	1
Amp_2p25.1	Del_10q23.31	0.911	1
Amp_10p14	Del_11p15.5	0.911	1
Amp_17q23.3	Del_6p25.3	0.911	1
Amp_19q13.43	Del_3p14.2	0.911	1
Del_3p14.2	Del_6p25.3	0.911	1
Del_3p14.2	Del_22q13.32	0.911	1
Del_6p25.3	Del_10q23.31	0.911	1
Del_11p15.5	Del_12p13.1	0.911	1
CDKN2A	9q-Del	0.912	1
CDKN2A	Amp_3q26.33	0.912	1
CDKN2A	Del_11q23.3	0.912	1
CDKN2A	Del_11q25	0.912	1
EP300	FOXA1	0.912	1
EP300	FOXQ1	0.912	1
EP300	MIPOL1	0.912	1
EP300	17q-Amp	0.912	1
EP300	3p-Amp	0.912	1
EP300	14q-Del	0.912	1
FOXA1	Del_5q12.1	0.912	1
RHOB	9q-Del	0.912	1
RHOB	Amp_3q26.33	0.912	1
RHOB	Amp_7p21.1	0.912	1
17q-Amp	Amp_7p21.1	0.912	1
17q-Amp	Del_5q12.1	0.912	1
17q-Amp	Del_11q25	0.912	1
14q-Del	Amp_3q26.33	0.912	1
14q-Del	Amp_7p21.1	0.912	1
14q-Del	Del_11q23.3	0.912	1
15q-Del	Del_11q23.3	0.912	1
15q-Del	Del_11q25	0.912	1
Amp_8q22.3	Amp_11p13	0.912	1
Amp_10p14	Del_8p23.1	0.912	1
Del_1p36.11	Del_5q12.1	0.912	1
FBXW7	7q-Amp	0.913	1
RXRA	4p-Del	0.913	1
7q-Amp	4p-Del	0.913	1
10q-Del	Amp_1q23.3	0.913	1
4p-Del	Del_14q24.1	0.913	1
Amp_1q23.3	Amp_4p16.3	0.913	1
Amp_1q23.3	Del_2q22.1	0.913	1
ASXL2	FGFR3	0.914	1
ASXL2	5p-Amp	0.914	1
ASXL2	Del_19p13.3	0.914	1
CREBBP	RBM26	0.914	1
FGFR3	RBM26	0.914	1
MLL2	Del_18q23	0.914	1
PHLDA3	RB1	0.914	1
PHLDA3	MLL	0.914	1
PHLDA3	Del_16p13.3	0.914	1
RB1	RAD51C	0.914	1
RB1	Amp_6q23.3	0.914	1
TSC1	5q-Del	0.914	1
TSC1	Del_6p25.3	0.914	1
MLL	19q-Amp	0.914	1
MLL	Amp_6q21	0.914	1
MLL	Del_1q32.1	0.914	1
RBM26	5p-Amp	0.914	1
19q-Amp	Del_16p13.3	0.914	1
20p-Amp	Del_2q22.1	0.914	1
20p-Amp	Del_15q13.1	0.914	1
3q-Amp	6q-Del	0.914	1
3q-Amp	Amp_19q13.43	0.914	1
10q-Del	Amp_19q13.43	0.914	1
10q-Del	Del_6p25.3	0.914	1
5q-Del	Amp_4p16.3	0.914	1
5q-Del	Del_4q22.1	0.914	1
6q-Del	Del_4q22.1	0.914	1
Amp_4p16.3	Del_22q13.32	0.914	1
Amp_6q21	Del_16p13.3	0.914	1
Amp_6q23.3	Amp_11q13.3	0.914	1
Amp_6q23.3	Del_2q34	0.914	1
Amp_6q23.3	Del_16p13.3	0.914	1
Amp_19q13.43	Del_2q22.1	0.914	1
Del_4q22.1	Del_22q13.32	0.914	1
Del_6p25.3	Del_15q13.1	0.914	1
Del_8p23.1	Del_Xq21.33	0.914	1
BTG2	ELF3	0.915	1
BTG2	TSC1	0.915	1
BTG2	10q-Del	0.915	1
BTG2	Amp_4p16.3	0.915	1
BTG2	Del_2q22.1	0.915	1
CDKN1A	TXNIP	0.915	1
CDKN1A	Amp_9p24.1	0.915	1
ELF3	Amp_4q13.3	0.915	1
GPC5	Del_3p14.2	0.915	1
HRAS	3q-Amp	0.915	1
HRAS	7p-Amp	0.915	1
HRAS	Del_2q22.1	0.915	1
TPTE	Amp_17q23.3	0.915	1
TXNIP	Del_3p14.2	0.915	1
ZFP36L1	3q-Amp	0.915	1
ZFP36L1	Del_2q22.1	0.915	1
ZFP36L1	Del_4q22.1	0.915	1
TSC1	Amp_4q13.3	0.915	1
1q-Amp	Del_11p15.5	0.915	1
3q-Amp	Amp_11q22.2	0.915	1
7p-Amp	Amp_11q22.2	0.915	1
11q-Del	Del_12p13.1	0.915	1
16p-Del	Del_11p15.5	0.915	1
Amp_4p16.3	Amp_11q22.2	0.915	1
Amp_4q13.3	Del_4q22.1	0.915	1
Amp_4q13.3	Del_15q13.1	0.915	1
Amp_9p24.1	Amp_17q23.3	0.915	1
Amp_9p24.1	Del_6q27	0.915	1
Amp_11q22.2	Del_15q13.1	0.915	1
Amp_12p12.1	Amp_17q23.3	0.915	1
Amp_16q22.1	Del_11p15.5	0.915	1
Amp_17q23.3	Del_12p13.1	0.915	1
ELF3	9q-Del	0.916	1
EP300	10q-Del	0.916	1
NFE2L2	9q-Del	0.916	1
NFE2L2	Amp_3q26.33	0.916	1
NFE2L2	Del_5q12.1	0.916	1
NFE2L2	Del_11q23.3	0.916	1
NFE2L2	Del_11q25	0.916	1
PIK3CA	22q-Del	0.916	1
TSC1	Amp_3q26.33	0.916	1
9q-Del	Del_2q22.1	0.916	1
Amp_3q26.33	Del_4q22.1	0.916	1
Amp_7p21.1	Del_2q22.1	0.916	1
Amp_7p21.1	Del_4q22.1	0.916	1
Amp_7p21.1	Del_15q13.1	0.916	1
Amp_8p11.23	Amp_17q23.3	0.916	1
Amp_16p13.2	Amp_20q11.21	0.916	1
Del_4q22.1	Del_11p15.5	0.916	1
Del_4q22.1	Del_11q23.3	0.916	1
Del_4q22.1	Del_11q25	0.916	1
Del_8p23.1	Del_18q23	0.916	1
20p-Amp	Del_9p21.3	0.917	1
20p-Amp	Del_17p12	0.917	1
Amp_2p25.1	Del_17p12	0.917	1
CDKN2A	MLL2	0.918	1
EP300	8p-Del	0.918	1
MLL2	Del_1p36.11	0.918	1
20p-Amp	8p-Del	0.918	1
11p-Del	Amp_2p25.1	0.918	1
11p-Del	Amp_19q13.43	0.918	1
11p-Del	Del_6p25.3	0.918	1
6q-Del	9p-Del	0.918	1
6q-Del	Amp_10p14	0.918	1
8p-Del	Amp_7p21.1	0.918	1
9p-Del	Amp_2p25.1	0.918	1
9q-Del	Amp_10p14	0.918	1
Amp_10p14	Del_22q13.32	0.918	1
BTG2	Del_2q37.1	0.919	1
CX3CL1	20p-Amp	0.919	1
CX3CL1	6q-Del	0.919	1
CX3CL1	Amp_2p25.1	0.919	1
CX3CL1	Del_22q13.32	0.919	1
FGFR3	Amp_1q23.3	0.919	1
KLF5	SPTAN1	0.919	1
MLL2	8p-Del	0.919	1
STAG2	4q-Del	0.919	1
TP53	Amp_1q23.3	0.919	1
TPTE	Amp_9p24.1	0.919	1
TXNIP	Amp_12p12.1	0.919	1
TXNIP	Del_12p13.1	0.919	1
CEP192	Amp_19q13.43	0.919	1
CEP192	Del_22q13.32	0.919	1
MLL	Amp_1q21.3	0.919	1
1q-Amp	6q-Del	0.919	1
1q-Amp	Amp_2p25.1	0.919	1
1q-Amp	Del_22q13.32	0.919	1
5p-Amp	Amp_1q23.3	0.919	1
16p-Del	Amp_2p25.1	0.919	1
16p-Del	Del_6p25.3	0.919	1
16p-Del	Del_22q13.32	0.919	1
17p-Del	Del_5q12.1	0.919	1
4q-Del	Del_16q23.1	0.919	1
5q-Del	Amp_16q22.1	0.919	1
9q-Del	Del_13q14.2	0.919	1
Amp_1q21.3	Del_2q34	0.919	1
Amp_1q23.3	Del_19p13.3	0.919	1
Amp_2p25.1	Amp_16q22.1	0.919	1
Amp_7p11.2	Amp_11q22.2	0.919	1
Amp_9p24.1	Del_12p13.1	0.919	1
Amp_11q13.3	Del_9p23	0.919	1
Amp_12p12.1	Del_12p13.1	0.919	1
Amp_16p11.2	Del_17p12	0.919	1
Amp_16q22.1	Amp_19q13.43	0.919	1
Amp_16q22.1	Del_6p25.3	0.919	1
Del_2q34	Del_9p23	0.919	1
Del_5q12.1	Del_13q14.2	0.919	1
BTG2	Del_9p21.3	0.92	1
Amp_6q21	Amp_8q22.3	0.92	1
FGFR3	Del_13q14.2	0.921	1
20q-Amp	18q-Del	0.921	1
5p-Amp	Del_13q14.2	0.921	1
Del_13q14.2	Del_19p13.3	0.921	1
ASXL2	FOXQ1	0.922	1
ASXL2	MIPOL1	0.922	1
ASXL2	RHOB	0.922	1
ASXL2	17q-Amp	0.922	1
BTG2	Amp_1q23.3	0.922	1
CDKN2A	22q-Del	0.922	1
CDKN2A	Del_13q14.2	0.922	1
FOXA1	Amp_16p13.2	0.922	1
FOXA1	Del_13q14.2	0.922	1
FOXQ1	RBM26	0.922	1
FOXQ1	Amp_16p13.2	0.922	1
FOXQ1	Del_13q14.2	0.922	1
MIPOL1	Amp_16p13.2	0.922	1
RHOB	RBM26	0.922	1
RHOB	22q-Del	0.922	1
TP53	22q-Del	0.922	1
TP53	Amp_16p13.2	0.922	1
RBM26	17q-Amp	0.922	1
17q-Amp	Amp_16p13.2	0.922	1
17q-Amp	Del_13q14.2	0.922	1
15q-Del	Amp_16p13.2	0.922	1
8p-Del	Amp_10p14	0.922	1
Amp_20q11.21	Del_9p21.3	0.922	1
Del_1p36.11	Del_13q14.2	0.922	1
Del_9q33.2	Del_13q14.2	0.922	1
CREBBP	PHLDA3	0.923	1
CREBBP	Amp_6q21	0.923	1
CX3CL1	Amp_11p13	0.923	1
CX3CL1	Del_7q36.3	0.923	1
ERBB3	Del_4q34.2	0.923	1
ERCC2	PHLDA3	0.923	1
ERCC2	8q-Amp	0.923	1
ERCC2	Amp_6q23.3	0.923	1
FGFR3	19q-Amp	0.923	1
FGFR3	Del_Xq21.33	0.923	1
SPTAN1	Del_4q34.2	0.923	1
SPTAN1	Del_19p13.3	0.923	1
STAG2	Del_19p13.3	0.923	1
ACRC	Amp_12q15	0.923	1
ACRC	Del_19p13.3	0.923	1
CEP192	Amp_11p13	0.923	1
CEP192	Del_7q36.3	0.923	1
ECM1	Amp_11p13	0.923	1
ECM1	Del_7q36.3	0.923	1
RAD51C	5p-Amp	0.923	1
RAD51C	Del_4q34.2	0.923	1
RAD51C	Del_19p13.3	0.923	1
19q-Amp	Amp_12q15	0.923	1
19q-Amp	Del_4q34.2	0.923	1
19q-Amp	Del_19p13.3	0.923	1
1q-Amp	Amp_11p13	0.923	1
1q-Amp	Del_7q36.3	0.923	1
8q-Amp	Del_4q34.2	0.923	1
16p-Del	Amp_11p13	0.923	1
16p-Del	Del_7q36.3	0.923	1
19p-Del	Del_18q23	0.923	1
Amp_6q21	Amp_12q15	0.923	1
Amp_7p11.2	Amp_20q11.21	0.923	1
Amp_11p13	Amp_16q22.1	0.923	1
Amp_16q22.1	Del_7q36.3	0.923	1
Del_1q32.1	Del_19p13.3	0.923	1
Del_4q34.2	Del_16q23.1	0.923	1
Del_4q34.2	Del_Xq21.33	0.923	1
Del_16q23.1	Del_19p13.3	0.923	1
ERCC2	PIK3CA	0.924	1
5p-Amp	Del_9q33.2	0.924	1
Amp_12q15	Amp_20q11.21	0.924	1
Amp_20q11.21	Del_19p13.3	0.924	1
ASXL2	8p-Del	0.926	1
ASXL2	9p-Del	0.926	1
EP300	20q-Amp	0.926	1
EP300	18q-Del	0.926	1
EP300	Amp_17q11.2	0.926	1
RHOB	Del_17p12	0.926	1
MLL	Amp_2p25.1	0.926	1
MLL	Del_22q13.32	0.926	1
RBM26	11p-Del	0.926	1
RBM26	Amp_10p14	0.926	1
17q-Amp	Del_17p12	0.926	1
20q-Amp	Amp_7p21.1	0.926	1
20q-Amp	Del_11q23.3	0.926	1
20q-Amp	Del_11q25	0.926	1
11p-Del	22q-Del	0.926	1
18q-Del	Del_11q25	0.926	1
22q-Del	9p-Del	0.926	1
5q-Del	Amp_11q13.3	0.926	1
5q-Del	Del_16p13.3	0.926	1
6q-Del	Amp_11q13.3	0.926	1
Amp_2p25.1	Del_16p13.3	0.926	1
Amp_7p21.1	Amp_13q22.1	0.926	1
Amp_11q13.3	Del_6p25.3	0.926	1
Amp_17q11.2	Del_11q23.3	0.926	1
Amp_17q11.2	Del_11q25	0.926	1
Amp_19q13.43	Del_2q34	0.926	1
Del_2q34	Del_22q13.32	0.926	1
GPC5	MLL	0.927	1
GPC5	Del_2q34	0.927	1
GPC5	Del_16p13.3	0.927	1
KDM6A	17p-Del	0.927	1
RB1	Amp_9p24.1	0.927	1
RB1	Amp_12p12.1	0.927	1
TPTE	Del_2q34	0.927	1
TPTE	Del_16p13.3	0.927	1
TXNIP	Amp_11q13.3	0.927	1
RBM26	18q-Del	0.927	1
RBM26	Amp_13q22.1	0.927	1
20q-Amp	22q-Del	0.927	1
8p-Del	Amp_8q22.3	0.927	1
Amp_1q21.3	Del_13q14.2	0.927	1
Amp_9p24.1	Del_2q34	0.927	1
Amp_12p12.1	Del_16p13.3	0.927	1
ARID1A	KLF5	0.928	1
Amp_2p25.1	Amp_5p15.33	0.928	1
Amp_3p25.2	Del_6p25.3	0.928	1
Amp_3p25.2	Del_22q13.32	0.928	1
Amp_5p15.33	Amp_16p11.2	0.928	1
Del_9p21.3	Del_18q23	0.928	1
Del_17p12	Del_18q23	0.928	1
BTG2	Amp_16p11.2	0.929	1
BTG2	Del_8p23.1	0.929	1
CX3CL1	Amp_6p22.3	0.929	1
ELF3	Del_13q14.2	0.929	1
EP300	19p-Del	0.929	1
HRAS	4q-Del	0.929	1
KLF5	Amp_4q13.3	0.929	1
ECM1	Amp_6p22.3	0.929	1
1q-Amp	Amp_6p22.3	0.929	1
16p-Del	Amp_6p22.3	0.929	1
17p-Del	Del_4q22.1	0.929	1
19p-Del	Amp_3q26.33	0.929	1
19p-Del	Del_11q23.3	0.929	1
19p-Del	Del_11q25	0.929	1
4q-Del	Amp_4q13.3	0.929	1
Amp_1p34.2	Amp_11q22.2	0.929	1
Amp_4q13.3	Amp_16p11.2	0.929	1
Amp_6p22.3	Amp_16q22.1	0.929	1
Del_5q12.1	Del_Xp11.3	0.929	1
Del_11q23.3	Del_Xp11.3	0.929	1
Del_11q25	Del_Xp11.3	0.929	1
Del_13q14.2	Del_15q13.1	0.929	1
CX3CL1	FBXW7	0.93	1
CX3CL1	Amp_22q12.2	0.93	1
CX3CL1	Del_14q24.1	0.93	1
RXRA	CEP192	0.93	1
RXRA	ECM1	0.93	1
CEP192	Amp_17q12	0.93	1
CEP192	Amp_22q12.2	0.93	1
ECM1	4p-Del	0.93	1
ECM1	Amp_17q12	0.93	1
ECM1	Amp_22q12.2	0.93	1
MLL	Del_2q37.1	0.93	1
1q-Amp	7q-Amp	0.93	1
1q-Amp	Amp_17q12	0.93	1
1q-Amp	Amp_22q12.2	0.93	1
7q-Amp	16p-Del	0.93	1
7q-Amp	Amp_16q22.1	0.93	1
16p-Del	4p-Del	0.93	1
16p-Del	Del_14q24.1	0.93	1
19p-Del	Del_Xp11.3	0.93	1
5q-Del	Del_2q37.1	0.93	1
Amp_2p25.1	Del_2q37.1	0.93	1
Amp_7p11.2	Amp_19q13.43	0.93	1
Amp_16q22.1	Amp_17q12	0.93	1
Amp_16q22.1	Del_14q24.1	0.93	1
Amp_19q13.43	Del_2q37.1	0.93	1
ELF3	Amp_17q12	0.931	1
ERCC2	Amp_3p25.2	0.931	1
FBXW7	NFE2L2	0.931	1
FBXW7	7p-Amp	0.931	1
NFE2L2	4p-Del	0.931	1
RXRA	10q-Del	0.931	1
RXRA	Del_2q22.1	0.931	1
RXRA	Del_15q13.1	0.931	1
TSC1	Amp_17q12	0.931	1
7p-Amp	4p-Del	0.931	1
7p-Amp	Amp_22q12.2	0.931	1
7q-Amp	Del_15q13.1	0.931	1
10q-Del	4p-Del	0.931	1
4p-Del	Del_15q13.1	0.931	1
Amp_3p25.2	Del_19p13.3	0.931	1
Amp_4p16.3	Amp_22q12.2	0.931	1
Amp_17q12	Del_2q22.1	0.931	1
Amp_20q11.21	Del_14q24.1	0.931	1
Amp_22q12.2	Del_2q22.1	0.931	1
Del_4q22.1	Del_14q24.1	0.931	1
Del_9q33.2	Del_14q24.1	0.931	1
PHLDA3	FAT1	0.932	1
PHLDA3	Amp_13q22.1	0.932	1
RXRA	Amp_17q23.3	0.932	1
RXRA	Del_6q27	0.932	1
RXRA	Del_10q23.31	0.932	1
ACRC	FAT1	0.932	1
ACRC	20q-Amp	0.932	1
FAT1	RAD51C	0.932	1
FAT1	Del_1q32.1	0.932	1
RAD51C	18q-Del	0.932	1
19q-Amp	18q-Del	0.932	1
19q-Amp	Amp_13q22.1	0.932	1
20q-Amp	Amp_6q21	0.932	1
20q-Amp	Del_1q32.1	0.932	1
20q-Amp	Del_Xq21.33	0.932	1
7p-Amp	Amp_8q22.3	0.932	1
11q-Del	Del_14q24.1	0.932	1
18q-Del	Amp_6q23.3	0.932	1
4p-Del	Del_3p14.2	0.932	1
4p-Del	Del_6q27	0.932	1
Amp_1q23.3	Amp_5p15.33	0.932	1
Amp_4p16.3	Amp_8q22.3	0.932	1
Amp_6q21	Amp_13q22.1	0.932	1
Amp_6q21	Amp_17q11.2	0.932	1
Amp_6q23.3	Amp_13q22.1	0.932	1
Amp_6q23.3	Amp_17q11.2	0.932	1
Amp_11q13.3	Del_11p15.5	0.932	1
Amp_13q22.1	Del_Xq21.33	0.932	1
Amp_17q11.2	Del_1q32.1	0.932	1
Amp_17q11.2	Del_Xq21.33	0.932	1
Amp_17q12	Del_3p14.2	0.932	1
Amp_17q12	Del_6q27	0.932	1
Amp_17q23.3	Del_14q24.1	0.932	1
Amp_22q12.2	Del_6q27	0.932	1
CDKN1A	RB1	0.933	1
CDKN1A	Amp_11q13.3	0.933	1
FOXA1	Amp_3p25.2	0.933	1
MIPOL1	Amp_3p25.2	0.933	1
17q-Amp	Amp_5p15.33	0.933	1
11q-Del	Del_2q34	0.933	1
14q-Del	Amp_5p15.33	0.933	1
15q-Del	Amp_5p15.33	0.933	1
Amp_8p11.23	Del_16p13.3	0.933	1
Amp_17q23.3	Del_16p13.3	0.933	1
Del_3p14.2	Del_16p13.3	0.933	1
Del_16q23.1	Del_18q23	0.933	1
KLF5	20p-Amp	0.934	1
KLF5	Del_6p25.3	0.934	1
MLL2	FAT1	0.934	1
20p-Amp	4q-Del	0.934	1
4q-Del	6q-Del	0.934	1
5q-Del	Amp_16p11.2	0.934	1
6q-Del	Amp_16p11.2	0.934	1
Amp_1p34.2	Del_22q13.32	0.934	1
Amp_10p14	Del_17p12	0.934	1
Amp_11p13	Del_17p12	0.934	1
Amp_16p11.2	Amp_19q13.43	0.934	1
Del_2q37.1	Del_11q23.3	0.934	1
Del_2q37.1	Del_11q25	0.934	1
Del_7q36.3	Del_17p12	0.934	1
ASXL2	Del_2q37.1	0.935	1
Amp_6p22.3	Del_3p14.2	0.935	1
Amp_16p13.2	Del_2q37.1	0.935	1
BTG2	Amp_19q12	0.936	1
MLL2	Amp_3q26.33	0.936	1
MLL2	Amp_7p21.1	0.936	1
TXNIP	Amp_1q23.3	0.936	1
ZFP36L1	Amp_19q12	0.936	1
7p-Amp	Amp_6p22.3	0.936	1
17p-Del	19p-Del	0.936	1
Amp_1q23.3	Amp_12p12.1	0.936	1
Amp_1q23.3	Del_12p13.1	0.936	1
Amp_7p11.2	Del_8p23.1	0.936	1
Amp_11q22.2	Amp_19q12	0.936	1
CREBBP	8p-Del	0.937	1
MLL2	7q-Amp	0.937	1
MLL2	4p-Del	0.937	1
Amp_1p34.2	Amp_1q21.3	0.937	1
Amp_1q23.3	Amp_8p11.23	0.937	1
Amp_1q23.3	Del_6q27	0.937	1
Amp_10p14	Del_4q34.2	0.937	1
Amp_10p14	Del_13q14.2	0.937	1
CDKN2A	GPC5	0.938	1
CDKN2A	TPTE	0.938	1
CDKN2A	TXNIP	0.938	1
CDKN2A	Del_12p13.1	0.938	1
CREBBP	Amp_9p24.1	0.938	1
ERBB3	18q-Del	0.938	1
ERBB3	Amp_17q11.2	0.938	1
ERCC2	GPC5	0.938	1
FGFR3	TXNIP	0.938	1
FGFR3	Del_12p13.1	0.938	1
FOXA1	GPC5	0.938	1
FOXA1	TPTE	0.938	1
FOXA1	Amp_12p12.1	0.938	1
FOXQ1	Amp_9p24.1	0.938	1
GPC5	RHOB	0.938	1
GPC5	3p-Amp	0.938	1
GPC5	14q-Del	0.938	1
GPC5	15q-Del	0.938	1
GPC5	Del_19p13.3	0.938	1
KDM6A	6q-Del	0.938	1
MIPOL1	Amp_9p24.1	0.938	1
MIPOL1	Del_12p13.1	0.938	1
PHLDA3	Amp_11p13	0.938	1
PHLDA3	Del_7q36.3	0.938	1
RHOB	TPTE	0.938	1
RHOB	Amp_9p24.1	0.938	1
RHOB	Amp_12p12.1	0.938	1
RHOB	Del_12p13.1	0.938	1
SPTAN1	20q-Amp	0.938	1
TPTE	17q-Amp	0.938	1
TPTE	Del_1p36.11	0.938	1
TPTE	Del_4q34.2	0.938	1
TPTE	Del_19p13.3	0.938	1
TXNIP	3p-Amp	0.938	1
TXNIP	5p-Amp	0.938	1
TXNIP	Del_4q34.2	0.938	1
ACRC	Amp_11p13	0.938	1
ACRC	Del_7q36.3	0.938	1
RAD51C	Amp_11p13	0.938	1
RAD51C	Del_7q36.3	0.938	1
17q-Amp	Amp_12p12.1	0.938	1
19q-Amp	Amp_11p13	0.938	1
19q-Amp	Del_7q36.3	0.938	1
20q-Amp	8q-Amp	0.938	1
3p-Amp	Del_12p13.1	0.938	1
5p-Amp	Amp_9p24.1	0.938	1
5p-Amp	Amp_12p12.1	0.938	1
14q-Del	Amp_9p24.1	0.938	1
14q-Del	Amp_12p12.1	0.938	1
14q-Del	Del_12p13.1	0.938	1
18q-Del	Del_16q23.1	0.938	1
5q-Del	Amp_1q21.3	0.938	1
Amp_1q21.3	Del_6p25.3	0.938	1
Amp_3p25.2	Amp_11p13	0.938	1
Amp_3p25.2	Del_7q36.3	0.938	1
Amp_6q21	Del_7q36.3	0.938	1
Amp_6q23.3	Amp_11p13	0.938	1
Amp_11p13	Del_1q32.1	0.938	1
Amp_11p13	Del_Xq21.33	0.938	1
Amp_12p12.1	Del_4q34.2	0.938	1
Del_1q32.1	Del_7q36.3	0.938	1
Del_4q34.2	Del_12p13.1	0.938	1
Del_7q36.3	Del_Xq21.33	0.938	1
Del_12p13.1	Del_19p13.3	0.938	1
ASXL2	SPTAN1	0.939	1
ERBB3	22q-Del	0.939	1
ERBB3	Amp_16p13.2	0.939	1
SPTAN1	RBM26	0.939	1
SPTAN1	Amp_16p13.2	0.939	1
STAG2	RBM26	0.939	1
8q-Amp	Amp_16p13.2	0.939	1
18q-Del	Del_13q14.2	0.939	1
Amp_1q23.3	Amp_20q11.21	0.939	1
Amp_7p11.2	Amp_10p14	0.939	1
Amp_17q23.3	Del_18q23	0.939	1
Amp_19q12	Del_10q23.31	0.939	1
CDKN2A	Amp_1q21.3	0.94	1
CREBBP	Del_22q13.32	0.94	1
ERBB3	PHLDA3	0.94	1
ERBB3	ACRC	0.94	1
ERBB3	RAD51C	0.94	1
ERBB3	19q-Amp	0.94	1
ERBB3	Del_Xq21.33	0.94	1
ERCC2	6q-Del	0.94	1
ERCC2	Amp_2p25.1	0.94	1
ERCC2	Amp_8q22.3	0.94	1
ERCC2	Del_6p25.3	0.94	1
FGFR3	6q-Del	0.94	1
FGFR3	Amp_2p25.1	0.94	1
FOXA1	KDM6A	0.94	1
FOXA1	Del_9p23	0.94	1
FOXQ1	Amp_1q21.3	0.94	1
KDM6A	MIPOL1	0.94	1
KDM6A	17q-Amp	0.94	1
PHLDA3	SPTAN1	0.94	1
RHOB	Amp_1q21.3	0.94	1
SPTAN1	RAD51C	0.94	1
SPTAN1	19q-Amp	0.94	1
SPTAN1	Del_1q32.1	0.94	1
SPTAN1	Del_Xq21.33	0.94	1
STAG2	Del_1q32.1	0.94	1
TP53	4p-Del	0.94	1
ACRC	Del_16q23.1	0.94	1
RAD51C	Del_16q23.1	0.94	1
19q-Amp	8q-Amp	0.94	1
19q-Amp	Del_16q23.1	0.94	1
20p-Amp	Amp_12q15	0.94	1
20p-Amp	Del_19p13.3	0.94	1
5p-Amp	Amp_8q22.3	0.94	1
8q-Amp	Amp_6q21	0.94	1
8q-Amp	Amp_6q23.3	0.94	1
8q-Amp	Del_1q32.1	0.94	1
8q-Amp	Del_Xq21.33	0.94	1
14q-Del	Amp_1q21.3	0.94	1
4q-Del	9q-Del	0.94	1
4q-Del	Del_5q12.1	0.94	1
6q-Del	Amp_12q15	0.94	1
Amp_1q21.3	Del_1p36.11	0.94	1
Amp_2p25.1	Del_19p13.3	0.94	1
Amp_7p21.1	Amp_16p11.2	0.94	1
Amp_7p21.1	Del_8p23.1	0.94	1
Amp_8q22.3	Amp_12q15	0.94	1
Del_4q34.2	Del_22q13.32	0.94	1
Del_11p15.5	Del_13q14.2	0.94	1
Del_16q23.1	Del_Xq21.33	0.94	1
CDKN2A	11q-Del	0.941	1
CDKN2A	Amp_17q23.3	0.941	1
CDKN2A	Del_3p14.2	0.941	1
CDKN2A	Del_6q27	0.941	1
CDKN2A	Del_10q23.31	0.941	1
ELF3	ECM1	0.941	1
ELF3	1q-Amp	0.941	1
ELF3	Amp_16q22.1	0.941	1
FOXA1	Amp_8p11.23	0.941	1
FOXA1	Del_3p14.2	0.941	1
FOXA1	Del_6q27	0.941	1
FOXQ1	Amp_17q23.3	0.941	1
FOXQ1	Del_3p14.2	0.941	1
FOXQ1	Del_6q27	0.941	1
MIPOL1	Amp_17q23.3	0.941	1
MIPOL1	Del_3p14.2	0.941	1
NFE2L2	CEP192	0.941	1
RHOB	11q-Del	0.941	1
RHOB	Amp_17q23.3	0.941	1
RHOB	Del_6q27	0.941	1
RHOB	Del_10q23.31	0.941	1
RXRA	11p-Del	0.941	1
TSC1	ECM1	0.941	1
TSC1	1q-Amp	0.941	1
TSC1	Amp_16q22.1	0.941	1
CEP192	Del_2q22.1	0.941	1
CEP192	Del_15q13.1	0.941	1
ECM1	Del_4q22.1	0.941	1
17q-Amp	Del_3p14.2	0.941	1
17q-Amp	Del_6q27	0.941	1
17q-Amp	Del_10q23.31	0.941	1
20p-Amp	Del_8p23.1	0.941	1
3p-Amp	11q-Del	0.941	1
3q-Amp	Amp_16q22.1	0.941	1
11p-Del	Del_14q24.1	0.941	1
11q-Del	15q-Del	0.941	1
11q-Del	Del_1p36.11	0.941	1
14q-Del	Amp_17q23.3	0.941	1
15q-Del	Amp_8p11.23	0.941	1
16p-Del	Del_4q22.1	0.941	1
16p-Del	Del_15q13.1	0.941	1
4p-Del	9p-Del	0.941	1
6q-Del	Del_8p23.1	0.941	1
Amp_4p16.3	Amp_16q22.1	0.941	1
Amp_5p15.33	Amp_19q12	0.941	1
Amp_19q13.43	Del_8p23.1	0.941	1
Del_1p36.11	Del_3p14.2	0.941	1
ASXL2	BTG2	0.942	1
ASXL2	HRAS	0.942	1
ASXL2	Amp_4q13.3	0.942	1
KDM6A	Amp_11p13	0.942	1
MLL2	ACRC	0.942	1
MLL2	Del_1q32.1	0.942	1
PHLDA3	TP53	0.942	1
PIK3CA	16p-Del	0.942	1
PIK3CA	Amp_16q22.1	0.942	1
TP53	RAD51C	0.942	1
TP53	Amp_6q21	0.942	1
TPTE	Del_8p23.1	0.942	1
ZFP36L1	RBM26	0.942	1
CEP192	Amp_20q11.21	0.942	1
RBM26	Amp_11q22.2	0.942	1
1q-Amp	Del_9q33.2	0.942	1
16p-Del	Del_9q33.2	0.942	1
Amp_1q21.3	Amp_11p13	0.942	1
Amp_1q21.3	Del_7q36.3	0.942	1
Amp_16q22.1	Amp_20q11.21	0.942	1
Del_4q34.2	Del_9p23	0.942	1
Del_7q36.3	Del_9p23	0.942	1
Del_9p23	Del_19p13.3	0.942	1
BTG2	EP300	0.943	1
BTG2	9q-Del	0.943	1
BTG2	Amp_3q26.33	0.943	1
BTG2	Del_11q25	0.943	1
EP300	Amp_4q13.3	0.943	1
KDM6A	Del_9q33.2	0.943	1
ZFP36L1	Del_11q23.3	0.943	1
ZFP36L1	Del_11q25	0.943	1
Amp_1q21.3	Del_9q33.2	0.943	1
Amp_4q13.3	Amp_7p21.1	0.943	1
Amp_12q15	Del_9p21.3	0.943	1
Del_4q34.2	Del_9p21.3	0.943	1
EP300	Del_16q23.1	0.944	1
ERBB3	Del_5q12.1	0.944	1
RB1	RXRA	0.944	1
RXRA	Del_2q34	0.944	1
SPTAN1	9q-Del	0.944	1
SPTAN1	Amp_3q26.33	0.944	1
STAG2	9q-Del	0.944	1
STAG2	Del_11q23.3	0.944	1
STAG2	Del_11q25	0.944	1
MLL	7q-Amp	0.944	1
7q-Amp	Del_16p13.3	0.944	1
8q-Amp	Amp_3q26.33	0.944	1
8q-Amp	Amp_6p22.3	0.944	1
8q-Amp	Del_5q12.1	0.944	1
18q-Del	Del_17p12	0.944	1
4p-Del	Del_2q34	0.944	1
4p-Del	Del_16p13.3	0.944	1
Amp_7p21.1	Del_16q23.1	0.944	1
Amp_22q12.2	Del_2q34	0.944	1
Del_14q24.1	Del_16p13.3	0.944	1
CDKN2A	TP53	0.945	1
ELF3	TSC1	0.945	1
ELF3	Del_4q22.1	0.945	1
FOXA1	TP53	0.945	1
GPC5	Amp_20q11.21	0.945	1
NFE2L2	3q-Amp	0.945	1
NFE2L2	10q-Del	0.945	1
TP53	14q-Del	0.945	1
TPTE	Amp_20q11.21	0.945	1
TXNIP	Del_9q33.2	0.945	1
TSC1	3q-Amp	0.945	1
TSC1	Amp_4p16.3	0.945	1
7p-Amp	Del_15q13.1	0.945	1
4p-Del	Del_17p12	0.945	1
4q-Del	Del_11p15.5	0.945	1
Amp_4p16.3	Del_2q22.1	0.945	1
Amp_9p24.1	Amp_20q11.21	0.945	1
Amp_17q11.2	Amp_20q11.21	0.945	1
Amp_17q23.3	Del_17p12	0.945	1
Del_9q33.2	Del_12p13.1	0.945	1
TP53	Del_16p13.3	0.946	1
19q-Amp	Del_17p12	0.946	1
20q-Amp	Amp_1q23.3	0.946	1
Amp_6q21	Del_17p12	0.946	1
Amp_6q23.3	Del_17p12	0.946	1
Del_17p12	Del_Xq21.33	0.946	1
RXRA	4q-Del	0.947	1
20p-Amp	Del_11p15.5	0.947	1
3p-Amp	Del_11p15.5	0.947	1
7q-Amp	4q-Del	0.947	1
4p-Del	Amp_16p11.2	0.947	1
4q-Del	Del_14q24.1	0.947	1
Amp_16p11.2	Amp_22q12.2	0.947	1
Amp_16p11.2	Del_14q24.1	0.947	1
Del_1p36.11	Del_11p15.5	0.947	1
CDKN1A	FGFR3	0.948	1
CDKN1A	5p-Amp	0.948	1
CDKN1A	19p-Del	0.948	1
CDKN1A	Del_Xp11.3	0.948	1
CX3CL1	8p-Del	0.948	1
ERCC2	Amp_7p11.2	0.948	1
ERCC2	Del_3p14.2	0.948	1
FGFR3	Amp_17q23.3	0.948	1
FGFR3	Del_3p14.2	0.948	1
FGFR3	Del_10q23.31	0.948	1
GPC5	Amp_13q22.1	0.948	1
TPTE	20q-Amp	0.948	1
TPTE	18q-Del	0.948	1
TXNIP	FAT1	0.948	1
TXNIP	18q-Del	0.948	1
TXNIP	Amp_17q11.2	0.948	1
ACRC	20p-Amp	0.948	1
ACRC	Amp_19q13.43	0.948	1
ACRC	Del_6p25.3	0.948	1
CEP192	8p-Del	0.948	1
CEP192	9p-Del	0.948	1
RAD51C	5q-Del	0.948	1
RAD51C	6q-Del	0.948	1
RAD51C	Del_6p25.3	0.948	1
RAD51C	Del_22q13.32	0.948	1
19q-Amp	5q-Del	0.948	1
19q-Amp	6q-Del	0.948	1
19q-Amp	Amp_2p25.1	0.948	1
19q-Amp	Del_6p25.3	0.948	1
19q-Amp	Del_22q13.32	0.948	1
1q-Amp	8p-Del	0.948	1
1q-Amp	Amp_10p14	0.948	1
20p-Amp	Del_Xq21.33	0.948	1
20q-Amp	Amp_9p24.1	0.948	1
5p-Amp	Amp_8p11.23	0.948	1
11p-Del	16p-Del	0.948	1
11q-Del	19p-Del	0.948	1
11q-Del	Del_Xp11.3	0.948	1
16p-Del	9p-Del	0.948	1
16p-Del	Amp_10p14	0.948	1
18q-Del	Amp_12p12.1	0.948	1
18q-Del	Del_12p13.1	0.948	1
19p-Del	Amp_8p11.23	0.948	1
19p-Del	Del_3p14.2	0.948	1
5q-Del	Amp_8q22.3	0.948	1
5q-Del	Del_1q32.1	0.948	1
6q-Del	Amp_6q23.3	0.948	1
6q-Del	Del_Xq21.33	0.948	1
Amp_2p25.1	Del_1q32.1	0.948	1
Amp_2p25.1	Del_Xq21.33	0.948	1
Amp_6q21	Amp_19q13.43	0.948	1
Amp_6q21	Del_22q13.32	0.948	1
Amp_6q23.3	Del_6p25.3	0.948	1
Amp_8p11.23	Del_19p13.3	0.948	1
Amp_8q22.3	Del_22q13.32	0.948	1
Amp_12p12.1	Amp_17q11.2	0.948	1
Amp_17q11.2	Del_12p13.1	0.948	1
Amp_17q23.3	Del_4q34.2	0.948	1
Amp_17q23.3	Del_Xp11.3	0.948	1
Amp_19q13.43	Del_Xq21.33	0.948	1
Del_1q32.1	Del_22q13.32	0.948	1
Del_2q37.1	Del_19p13.3	0.948	1
Del_4q34.2	Del_10q23.31	0.948	1
KLF5	Del_13q14.2	0.949	1
17p-Del	Amp_16p11.2	0.949	1
17p-Del	Del_2q37.1	0.949	1
4q-Del	Del_13q14.2	0.949	1
Amp_8q22.3	Amp_9p24.1	0.949	1
Amp_16p11.2	Del_13q14.2	0.949	1
CDKN1A	TSC1	0.95	1
CDKN2A	MLL	0.95	1
ELF3	Del_3p14.2	0.95	1
FOXA1	Del_2q34	0.95	1
FOXQ1	MLL	0.95	1
FOXQ1	Del_2q34	0.95	1
FOXQ1	Del_16p13.3	0.95	1
NFE2L2	Del_3p14.2	0.95	1
NFE2L2	Del_10q23.31	0.95	1
RHOB	MLL	0.95	1
17q-Amp	Del_2q34	0.95	1
17q-Amp	Del_16p13.3	0.95	1
3p-Amp	Amp_11q13.3	0.95	1
3p-Amp	Del_16p13.3	0.95	1
3q-Amp	Del_3p14.2	0.95	1
3q-Amp	Del_6q27	0.95	1
11q-Del	Del_15q13.1	0.95	1
14q-Del	Del_2q34	0.95	1
22q-Del	Del_17p12	0.95	1
Amp_7p11.2	Amp_17q12	0.95	1
Del_1p36.11	Del_2q34	0.95	1
Del_2q22.1	Del_10q23.31	0.95	1
Del_3p14.2	Del_4q22.1	0.95	1
ARID1A	PHLDA3	0.951	1
ARID1A	19q-Amp	0.951	1
ARID1A	Del_Xq21.33	0.951	1
ASXL2	5q-Del	0.951	1
ASXL2	Amp_2p25.1	0.951	1
ASXL2	Amp_19q13.43	0.951	1
ASXL2	Del_6p25.3	0.951	1
ASXL2	Del_22q13.32	0.951	1
CDKN1A	EP300	0.951	1
CDKN1A	Del_5q12.1	0.951	1
EP300	Del_10q23.31	0.951	1
KLF5	CEP192	0.951	1
KLF5	ECM1	0.951	1
KLF5	1q-Amp	0.951	1
CEP192	Amp_16p11.2	0.951	1
ECM1	4q-Del	0.951	1
ECM1	Amp_1p34.2	0.951	1
19q-Amp	Amp_5p15.33	0.951	1
1q-Amp	Amp_1p34.2	0.951	1
1q-Amp	Amp_16p11.2	0.951	1
20p-Amp	22q-Del	0.951	1
5p-Amp	Del_11p15.5	0.951	1
11q-Del	Del_5q12.1	0.951	1
16p-Del	4q-Del	0.951	1
17p-Del	Amp_1q23.3	0.951	1
22q-Del	Amp_2p25.1	0.951	1
6q-Del	Amp_16p13.2	0.951	1
6q-Del	Amp_19q12	0.951	1
9q-Del	Del_3p14.2	0.951	1
Amp_1p34.2	Amp_16q22.1	0.951	1
Amp_2p25.1	Del_18q23	0.951	1
Amp_3p25.2	Amp_6q21	0.951	1
Amp_5p15.33	Amp_6q23.3	0.951	1
Amp_16p11.2	Amp_16q22.1	0.951	1
Amp_20q11.21	Del_8p23.1	0.951	1
Del_11p15.5	Del_19p13.3	0.951	1
Del_18q23	Del_22q13.32	0.951	1
CDKN2A	FOXQ1	0.952	1
CDKN2A	RHOB	0.952	1
CDKN2A	3p-Amp	0.952	1
CDKN2A	14q-Del	0.952	1
FOXA1	17q-Amp	0.952	1
FOXQ1	MIPOL1	0.952	1
FOXQ1	RHOB	0.952	1
FOXQ1	17q-Amp	0.952	1
GPC5	11p-Del	0.952	1
KDM6A	Amp_19q12	0.952	1
MIPOL1	17q-Amp	0.952	1
RHOB	14q-Del	0.952	1
TPTE	8p-Del	0.952	1
TXNIP	11p-Del	0.952	1
17q-Amp	14q-Del	0.952	1
17q-Amp	15q-Del	0.952	1
20p-Amp	18q-Del	0.952	1
20q-Amp	5q-Del	0.952	1
20q-Amp	Amp_19q13.43	0.952	1
3p-Amp	Del_1p36.11	0.952	1
11p-Del	Del_12p13.1	0.952	1
14q-Del	15q-Del	0.952	1
18q-Del	Amp_2p25.1	0.952	1
22q-Del	Del_18q23	0.952	1
8p-Del	Del_12p13.1	0.952	1
Amp_9p24.1	Amp_10p14	0.952	1
Amp_10p14	Amp_12p12.1	0.952	1
Amp_17q11.2	Del_6p25.3	0.952	1
Del_9p23	Del_18q23	0.952	1
ELF3	Del_9q33.2	0.953	1
RXRA	Amp_5p15.33	0.953	1
TP53	Del_17p12	0.953	1
19q-Amp	Del_9p21.3	0.953	1
7p-Amp	Amp_20q11.21	0.953	1
19p-Del	Amp_11p13	0.953	1
19p-Del	Del_7q36.3	0.953	1
Amp_3p25.2	Del_14q24.1	0.953	1
Amp_5p15.33	Amp_22q12.2	0.953	1
Amp_6p22.3	Del_7q36.3	0.953	1
Amp_11p13	Del_Xp11.3	0.953	1
Del_4q22.1	Del_9q33.2	0.953	1
Del_7q36.3	Del_Xp11.3	0.953	1
Del_16p13.3	Del_Xp11.3	0.953	1
ARID1A	Amp_8p11.23	0.954	1
BTG2	TPTE	0.954	1
BTG2	Amp_9p24.1	0.954	1
BTG2	Del_12p13.1	0.954	1
GPC5	HRAS	0.954	1
GPC5	Amp_4q13.3	0.954	1
GPC5	Amp_11q22.2	0.954	1
HRAS	TPTE	0.954	1
HRAS	Amp_9p24.1	0.954	1
HRAS	Amp_12p12.1	0.954	1
MLL2	MLL	0.954	1
SPTAN1	Del_13q14.2	0.954	1
TP53	Amp_19q12	0.954	1
TXNIP	ZFP36L1	0.954	1
TXNIP	Amp_4q13.3	0.954	1
1q-Amp	Del_2q37.1	0.954	1
20q-Amp	Del_8p23.1	0.954	1
18q-Del	8p-Del	0.954	1
4q-Del	Del_8p23.1	0.954	1
Amp_3p25.2	Amp_8p11.23	0.954	1
Amp_9p24.1	Amp_11q22.2	0.954	1
Amp_11q22.2	Amp_12p12.1	0.954	1
Amp_11q22.2	Del_12p13.1	0.954	1
Amp_16q22.1	Del_2q37.1	0.954	1
Amp_17q11.2	Del_8p23.1	0.954	1
CREBBP	FBXW7	0.955	1
CREBBP	7q-Amp	0.955	1
ERCC2	Amp_17q12	0.955	1
FGFR3	4p-Del	0.955	1
KDM6A	19q-Amp	0.955	1
KDM6A	Amp_6q21	0.955	1
KDM6A	Del_1q32.1	0.955	1
RXRA	Del_4q34.2	0.955	1
RXRA	Del_19p13.3	0.955	1
TP53	Amp_1p34.2	0.955	1
RAD51C	Del_9p23	0.955	1
5p-Amp	4p-Del	0.955	1
5p-Amp	Amp_22q12.2	0.955	1
7q-Amp	Amp_12q15	0.955	1
7q-Amp	Del_4q34.2	0.955	1
4p-Del	Del_19p13.3	0.955	1
Del_14q24.1	Del_19p13.3	0.955	1
ARID1A	RBM26	0.956	1
BTG2	MLL2	0.956	1
FBXW7	Amp_6q23.3	0.956	1
PHLDA3	7q-Amp	0.956	1
PIK3CA	Del_3p14.2	0.956	1
PIK3CA	Del_6q27	0.956	1
RXRA	RAD51C	0.956	1
RXRA	Amp_6q23.3	0.956	1
ACRC	7q-Amp	0.956	1
ACRC	Del_14q24.1	0.956	1
RAD51C	7q-Amp	0.956	1
RAD51C	Del_14q24.1	0.956	1
19q-Amp	Amp_17q12	0.956	1
19q-Amp	Del_14q24.1	0.956	1
7q-Amp	Del_Xq21.33	0.956	1
4p-Del	Amp_6q23.3	0.956	1
Amp_6q21	Amp_22q12.2	0.956	1
Amp_6q21	Del_14q24.1	0.956	1
Amp_6q23.3	Amp_17q12	0.956	1
Amp_6q23.3	Del_14q24.1	0.956	1
Amp_8p11.23	Amp_20q11.21	0.956	1
Amp_17q12	Del_1q32.1	0.956	1
Amp_17q12	Del_Xq21.33	0.956	1
Amp_17q23.3	Amp_20q11.21	0.956	1
Amp_17q23.3	Del_9q33.2	0.956	1
Amp_22q12.2	Del_Xq21.33	0.956	1
Del_9q33.2	Del_10q23.31	0.956	1
GPC5	SPTAN1	0.957	1
SPTAN1	TXNIP	0.957	1
STAG2	Amp_12p12.1	0.957	1
STAG2	Del_12p13.1	0.957	1
8q-Amp	Del_12p13.1	0.957	1
8p-Del	Amp_1q23.3	0.957	1
Del_5q12.1	Del_9p21.3	0.957	1
CDKN2A	FGFR3	0.958	1
CDKN2A	Del_4q34.2	0.958	1
CREBBP	FOXA1	0.958	1
CREBBP	RHOB	0.958	1
CREBBP	19p-Del	0.958	1
ELF3	Amp_1p34.2	0.958	1
ERCC2	MIPOL1	0.958	1
ERCC2	RHOB	0.958	1
ERCC2	3p-Amp	0.958	1
ERCC2	15q-Del	0.958	1
ERCC2	19p-Del	0.958	1
FGFR3	FOXA1	0.958	1
FGFR3	RHOB	0.958	1
FOXA1	Del_4q34.2	0.958	1
KLF5	NFE2L2	0.958	1
NFE2L2	4q-Del	0.958	1
RHOB	5p-Amp	0.958	1
RXRA	Amp_1q23.3	0.958	1
TSC1	Amp_1p34.2	0.958	1
17q-Amp	Amp_6p22.3	0.958	1
17q-Amp	Amp_12q15	0.958	1
3p-Amp	Amp_12q15	0.958	1
5p-Amp	Del_Xp11.3	0.958	1
7p-Amp	4q-Del	0.958	1
10q-Del	4q-Del	0.958	1
10q-Del	Amp_16p11.2	0.958	1
11p-Del	Amp_1q21.3	0.958	1
14q-Del	Amp_6p22.3	0.958	1
15q-Del	Amp_12q15	0.958	1
15q-Del	Del_4q34.2	0.958	1
15q-Del	Del_9p21.3	0.958	1
15q-Del	Del_19p13.3	0.958	1
19p-Del	Del_4q34.2	0.958	1
4q-Del	Del_15q13.1	0.958	1
Amp_1p34.2	Del_4q22.1	0.958	1
Amp_1q21.3	Amp_5p15.33	0.958	1
Amp_1q23.3	Amp_11q13.3	0.958	1
Amp_5p15.33	Amp_8q22.3	0.958	1
Amp_12q15	Del_1p36.11	0.958	1
Amp_12q15	Del_Xp11.3	0.958	1
Amp_16p11.2	Del_15q13.1	0.958	1
ASXL2	Amp_3q26.33	0.959	1
ASXL2	Del_5q12.1	0.959	1
EP300	22q-Del	0.959	1
EP300	Amp_19q12	0.959	1
ERCC2	MLL	0.959	1
KDM6A	RXRA	0.959	1
RB1	10q-Del	0.959	1
RB1	Del_15q13.1	0.959	1
MLL	7p-Amp	0.959	1
3q-Amp	Amp_11q13.3	0.959	1
3q-Amp	Del_2q34	0.959	1
5p-Amp	Amp_11q13.3	0.959	1
22q-Del	9q-Del	0.959	1
Amp_1p34.2	Amp_6p22.3	0.959	1
Amp_1q21.3	Amp_22q12.2	0.959	1
Amp_3q26.33	Del_18q23	0.959	1
Amp_6p22.3	Amp_16p11.2	0.959	1
Amp_7p11.2	Amp_9p24.1	0.959	1
Amp_9p24.1	Del_2q37.1	0.959	1
Amp_11p13	Amp_20q11.21	0.959	1
Amp_11q13.3	Del_2q22.1	0.959	1
Amp_11q13.3	Del_15q13.1	0.959	1
Del_1q32.1	Del_11p15.5	0.959	1
Del_2q22.1	Del_16p13.3	0.959	1
Del_2q34	Del_15q13.1	0.959	1
Del_2q34	Del_19p13.3	0.959	1
Del_4q34.2	Del_16p13.3	0.959	1
Del_9p23	Del_14q24.1	0.959	1
ASXL2	CX3CL1	0.96	1
ASXL2	FBXW7	0.96	1
ASXL2	CEP192	0.96	1
ASXL2	ECM1	0.96	1
ASXL2	1q-Amp	0.96	1
ASXL2	16p-Del	0.96	1
ASXL2	Amp_16q22.1	0.96	1
ASXL2	Del_14q24.1	0.96	1
EP300	5q-Del	0.96	1
FBXW7	Amp_16p13.2	0.96	1
KDM6A	20q-Amp	0.96	1
KDM6A	Amp_13q22.1	0.96	1
MLL2	7p-Amp	0.96	1
NFE2L2	9p-Del	0.96	1
RXRA	22q-Del	0.96	1
TSC1	9p-Del	0.96	1
CEP192	22q-Del	0.96	1
ECM1	RBM26	0.96	1
1q-Amp	22q-Del	0.96	1
20p-Amp	Del_5q12.1	0.96	1
10q-Del	9p-Del	0.96	1
11p-Del	Del_4q22.1	0.96	1
16p-Del	Amp_16p13.2	0.96	1
18q-Del	Del_9p23	0.96	1
22q-Del	4p-Del	0.96	1
8p-Del	Del_4q22.1	0.96	1
9p-Del	Del_2q22.1	0.96	1
Amp_3q26.33	Amp_19q13.43	0.96	1
Amp_3q26.33	Del_6p25.3	0.96	1
Amp_7p21.1	Amp_19q13.43	0.96	1
Amp_10p14	Del_2q22.1	0.96	1
Amp_16p13.2	Amp_17q12	0.96	1
Amp_16p13.2	Amp_22q12.2	0.96	1
Del_6p25.3	Del_11q23.3	0.96	1
Del_6p25.3	Del_11q25	0.96	1
ASXL2	Amp_1q21.3	0.961	1
ASXL2	Del_9p23	0.961	1
BTG2	Del_17p12	0.961	1
SPTAN1	Del_9q33.2	0.961	1
FAT1	Amp_17q23.3	0.961	1
20q-Amp	11q-Del	0.961	1
20q-Amp	Del_3p14.2	0.961	1
20q-Amp	Del_6q27	0.961	1
8q-Amp	Amp_20q11.21	0.961	1
8q-Amp	Del_9q33.2	0.961	1
Amp_17q11.2	Del_6q27	0.961	1
Amp_20q11.21	Del_16q23.1	0.961	1
11q-Del	Del_13q14.2	0.962	1
6q-Del	Amp_6p22.3	0.962	1
BTG2	11q-Del	0.963	1
BTG2	Del_6q27	0.963	1
BTG2	Del_10q23.31	0.963	1
CDKN1A	HRAS	0.963	1
ELF3	Del_1q32.1	0.963	1
ERBB3	Del_22q13.32	0.963	1
KDM6A	Amp_6p22.3	0.963	1
KDM6A	Amp_17q23.3	0.963	1
PHLDA3	3q-Amp	0.963	1
PHLDA3	7p-Amp	0.963	1
PHLDA3	Del_2q22.1	0.963	1
PHLDA3	Del_4q22.1	0.963	1
SPTAN1	6q-Del	0.963	1
SPTAN1	Del_22q13.32	0.963	1
STAG2	20p-Amp	0.963	1
ZFP36L1	11q-Del	0.963	1
TSC1	19q-Amp	0.963	1
TSC1	Amp_6q21	0.963	1
TSC1	Del_Xq21.33	0.963	1
ACRC	3q-Amp	0.963	1
ACRC	7p-Amp	0.963	1
ACRC	10q-Del	0.963	1
ACRC	Amp_4p16.3	0.963	1
ACRC	Del_2q22.1	0.963	1
RAD51C	3q-Amp	0.963	1
RAD51C	7p-Amp	0.963	1
RAD51C	10q-Del	0.963	1
19q-Amp	Amp_4p16.3	0.963	1
19q-Amp	Del_2q22.1	0.963	1
3q-Amp	Amp_6q21	0.963	1
3q-Amp	Del_Xq21.33	0.963	1
8q-Amp	Del_6p25.3	0.963	1
8q-Amp	Del_22q13.32	0.963	1
10q-Del	Del_Xq21.33	0.963	1
11q-Del	Amp_1q21.3	0.963	1
18q-Del	19p-Del	0.963	1
9q-Del	Del_2q34	0.963	1
Amp_1q21.3	Amp_8p11.23	0.963	1
Amp_1q21.3	Del_3p14.2	0.963	1
Amp_4q13.3	Amp_8p11.23	0.963	1
Amp_4q13.3	Amp_17q23.3	0.963	1
Amp_6q21	Del_4q22.1	0.963	1
Amp_6q21	Del_15q13.1	0.963	1
Amp_6q23.3	Del_4q22.1	0.963	1
Amp_8p11.23	Del_9p23	0.963	1
Amp_17q11.2	Del_2q37.1	0.963	1
Amp_17q11.2	Del_Xp11.3	0.963	1
Del_2q22.1	Del_Xq21.33	0.963	1
Del_2q34	Del_11q23.3	0.963	1
Del_2q34	Del_11q25	0.963	1
Del_5q12.1	Del_16p13.3	0.963	1
Del_11q23.3	Del_16p13.3	0.963	1
Del_11q25	Del_16p13.3	0.963	1
Del_16q23.1	Del_17p12	0.963	1
RXRA	20q-Amp	0.964	1
RXRA	Amp_17q11.2	0.964	1
20q-Amp	7q-Amp	0.964	1
20q-Amp	Del_14q24.1	0.964	1
7q-Amp	18q-Del	0.964	1
16p-Del	Amp_19q12	0.964	1
16p-Del	Del_18q23	0.964	1
4p-Del	Amp_13q22.1	0.964	1
Amp_22q12.2	Del_8p23.1	0.964	1
BTG2	14q-Del	0.965	1
BTG2	15q-Del	0.965	1
BTG2	Del_1p36.11	0.965	1
CDKN1A	11p-Del	0.965	1
CDKN1A	9p-Del	0.965	1
CDKN2A	ZFP36L1	0.965	1
CDKN2A	18q-Del	0.965	1
FOXA1	HRAS	0.965	1
FOXA1	ZFP36L1	0.965	1
FOXA1	Amp_4q13.3	0.965	1
FOXQ1	Amp_17q11.2	0.965	1
HRAS	MIPOL1	0.965	1
HRAS	3p-Amp	0.965	1
MIPOL1	Amp_17q11.2	0.965	1
RHOB	Amp_11q22.2	0.965	1
TP53	Del_22q13.32	0.965	1
TPTE	20p-Amp	0.965	1
TPTE	Amp_2p25.1	0.965	1
ZFP36L1	17q-Amp	0.965	1
FAT1	Del_1p36.11	0.965	1
17q-Amp	20q-Amp	0.965	1
17q-Amp	Amp_4q13.3	0.965	1
20p-Amp	Amp_9p24.1	0.965	1
3p-Amp	Amp_11q22.2	0.965	1
15q-Del	Amp_4q13.3	0.965	1
18q-Del	Del_1p36.11	0.965	1
4q-Del	Del_3p14.2	0.965	1
6q-Del	Amp_9p24.1	0.965	1
8p-Del	Amp_20q11.21	0.965	1
9p-Del	Amp_20q11.21	0.965	1
Amp_3p25.2	Amp_4q13.3	0.965	1
Amp_8p11.23	Amp_10p14	0.965	1
Amp_9p24.1	Amp_19q13.43	0.965	1
Amp_9p24.1	Del_6p25.3	0.965	1
Amp_10p14	Amp_20q11.21	0.965	1
Amp_10p14	Del_3p14.2	0.965	1
Amp_10p14	Del_6q27	0.965	1
Amp_11q22.2	Del_1p36.11	0.965	1
Amp_13q22.1	Del_1p36.11	0.965	1
Amp_19q13.43	Del_12p13.1	0.965	1
ASXL2	17p-Del	0.966	1
CX3CL1	Amp_1q23.3	0.966	1
FGFR3	Del_18q23	0.966	1
TP53	Amp_8p11.23	0.966	1
TP53	Del_3p14.2	0.966	1
TSC1	Del_17p12	0.966	1
RBM26	Del_13q14.2	0.966	1
3q-Amp	Del_17p12	0.966	1
5p-Amp	Del_18q23	0.966	1
10q-Del	Del_17p12	0.966	1
16p-Del	Amp_1q23.3	0.966	1
17p-Del	22q-Del	0.966	1
22q-Del	Del_13q14.2	0.966	1
4p-Del	Amp_19q12	0.966	1
4p-Del	Del_11p15.5	0.966	1
9q-Del	Amp_20q11.21	0.966	1
Amp_1q23.3	Amp_16q22.1	0.966	1
Amp_7p11.2	Amp_11p13	0.966	1
Amp_7p11.2	Del_7q36.3	0.966	1
Amp_16p13.2	Del_13q14.2	0.966	1
Amp_19q12	Amp_22q12.2	0.966	1
Amp_19q12	Del_4q34.2	0.966	1
Amp_20q11.21	Del_11q25	0.966	1
Amp_22q12.2	Del_11p15.5	0.966	1
Del_2q37.1	Del_7q36.3	0.966	1
Del_4q22.1	Del_17p12	0.966	1
Del_5q12.1	Del_9q33.2	0.966	1
Del_18q23	Del_19p13.3	0.966	1
ASXL2	Del_11p15.5	0.967	1
CREBBP	7p-Amp	0.967	1
CREBBP	Del_15q13.1	0.967	1
ELF3	FGFR3	0.967	1
ERCC2	7p-Amp	0.967	1
ERCC2	Del_15q13.1	0.967	1
FGFR3	TSC1	0.967	1
FGFR3	Amp_4p16.3	0.967	1
NFE2L2	Del_4q34.2	0.967	1
NFE2L2	Del_19p13.3	0.967	1
PHLDA3	Amp_6p22.3	0.967	1
TP53	Amp_10p14	0.967	1
19q-Amp	Amp_6p22.3	0.967	1
20q-Amp	Del_11p15.5	0.967	1
5p-Amp	Amp_4p16.3	0.967	1
5p-Amp	Amp_6p22.3	0.967	1
10q-Del	Del_4q34.2	0.967	1
10q-Del	Del_19p13.3	0.967	1
17p-Del	5q-Del	0.967	1
Amp_2p25.1	Del_13q14.2	0.967	1
Amp_6p22.3	Del_Xq21.33	0.967	1
Del_4q34.2	Del_15q13.1	0.967	1
CDKN2A	PIK3CA	0.968	1
CX3CL1	GPC5	0.968	1
CX3CL1	TPTE	0.968	1
CX3CL1	Amp_9p24.1	0.968	1
EP300	ECM1	0.968	1
ERBB3	8p-Del	0.968	1
FOXA1	Del_9q33.2	0.968	1
GPC5	CEP192	0.968	1
GPC5	Amp_16q22.1	0.968	1
MIPOL1	PIK3CA	0.968	1
SPTAN1	11p-Del	0.968	1
SPTAN1	9p-Del	0.968	1
STAG2	19p-Del	0.968	1
STAG2	Del_Xp11.3	0.968	1
TPTE	16p-Del	0.968	1
TPTE	Amp_16q22.1	0.968	1
TXNIP	ECM1	0.968	1
TXNIP	16p-Del	0.968	1
CEP192	Amp_9p24.1	0.968	1
ECM1	Del_12p13.1	0.968	1
17q-Amp	Amp_20q11.21	0.968	1
1q-Amp	9q-Del	0.968	1
1q-Amp	Del_11q23.3	0.968	1
1q-Amp	Del_11q25	0.968	1
1q-Amp	Del_12p13.1	0.968	1
14q-Del	Amp_20q11.21	0.968	1
14q-Del	Del_9q33.2	0.968	1
15q-Del	Amp_20q11.21	0.968	1
16p-Del	9q-Del	0.968	1
16p-Del	Amp_9p24.1	0.968	1
16p-Del	Amp_12p12.1	0.968	1
16p-Del	Del_5q12.1	0.968	1
16p-Del	Del_11q23.3	0.968	1
19p-Del	Del_16q23.1	0.968	1
9q-Del	Amp_16q22.1	0.968	1
Amp_3p25.2	Del_11p15.5	0.968	1
Amp_3q26.33	Amp_16q22.1	0.968	1
Amp_3q26.33	Del_11q23.3	0.968	1
Amp_12p12.1	Amp_16q22.1	0.968	1
ARID1A	Amp_11q13.3	0.969	1
ASXL2	TSC1	0.969	1
ASXL2	3q-Amp	0.969	1
BTG2	KDM6A	0.969	1
BTG2	MLL	0.969	1
BTG2	Amp_11q13.3	0.969	1
FGFR3	Amp_12q15	0.969	1
HRAS	MLL	0.969	1
KDM6A	ZFP36L1	0.969	1
KDM6A	Amp_4q13.3	0.969	1
KLF5	Del_Xq21.33	0.969	1
MLL2	Amp_8q22.3	0.969	1
PHLDA3	Amp_1p34.2	0.969	1
RB1	18q-Del	0.969	1
RB1	Amp_5p15.33	0.969	1
ZFP36L1	Amp_11q13.3	0.969	1
ECM1	Del_8p23.1	0.969	1
RAD51C	Amp_1p34.2	0.969	1
RBM26	Amp_4p16.3	0.969	1
RBM26	Del_4q22.1	0.969	1
17q-Amp	Amp_1q23.3	0.969	1
7q-Amp	Amp_8q22.3	0.969	1
17p-Del	Del_18q23	0.969	1
22q-Del	Del_2q22.1	0.969	1
4q-Del	Amp_6q23.3	0.969	1
Amp_4q13.3	Del_16p13.3	0.969	1
Amp_8q22.3	Amp_17q12	0.969	1
Amp_11p13	Del_7q36.3	0.969	1
Amp_13q22.1	Del_2q34	0.969	1
Amp_16p13.2	Del_15q13.1	0.969	1
Amp_16p11.2	Del_Xq21.33	0.969	1
Amp_17q11.2	Del_2q34	0.969	1
Del_2q37.1	Del_9p23	0.969	1
Del_4q34.2	Del_19p13.3	0.969	1
MLL2	Del_4q34.2	0.97	1
Amp_12p12.1	Del_18q23	0.97	1
Amp_16p11.2	Amp_20q11.21	0.97	1
CDKN1A	Del_16q23.1	0.971	1
CDKN2A	8q-Amp	0.971	1
ERBB3	RHOB	0.971	1
ERBB3	14q-Del	0.971	1
ERBB3	Del_6q27	0.971	1
FOXA1	STAG2	0.971	1
MIPOL1	8q-Amp	0.971	1
MIPOL1	Del_16q23.1	0.971	1
RHOB	STAG2	0.971	1
SPTAN1	14q-Del	0.971	1
SPTAN1	Del_6q27	0.971	1
SPTAN1	Del_10q23.31	0.971	1
TP53	TPTE	0.971	1
TP53	TXNIP	0.971	1
TP53	Amp_9p24.1	0.971	1
3p-Amp	8q-Amp	0.971	1
3q-Amp	Amp_3p25.2	0.971	1
8q-Amp	Amp_8p11.23	0.971	1
10q-Del	Amp_5p15.33	0.971	1
17p-Del	Amp_11q13.3	0.971	1
17p-Del	Del_2q34	0.971	1
17p-Del	Del_16p13.3	0.971	1
Amp_5p15.33	Del_15q13.1	0.971	1
Amp_8q22.3	Del_16p13.3	0.971	1
Amp_19q12	Del_7q36.3	0.971	1
Del_13q14.2	Del_16p13.3	0.971	1
CX3CL1	Amp_8q22.3	0.972	1
ERBB3	Amp_22q12.2	0.972	1
FOXQ1	8p-Del	0.972	1
GPC5	RXRA	0.972	1
GPC5	7q-Amp	0.972	1
GPC5	Del_17p12	0.972	1
RHOB	11p-Del	0.972	1
RXRA	STAG2	0.972	1
RXRA	TXNIP	0.972	1
RXRA	Amp_9p24.1	0.972	1
RXRA	Del_5q12.1	0.972	1
RXRA	Del_12p13.1	0.972	1
TP53	ECM1	0.972	1
TP53	16p-Del	0.972	1
TXNIP	Del_14q24.1	0.972	1
TXNIP	Del_17p12	0.972	1
1q-Amp	Amp_8q22.3	0.972	1
20p-Amp	5q-Del	0.972	1
20p-Amp	6q-Del	0.972	1
3p-Amp	Amp_10p14	0.972	1
7q-Amp	Amp_12p12.1	0.972	1
8q-Amp	Amp_17q12	0.972	1
8q-Amp	Amp_22q12.2	0.972	1
11p-Del	14q-Del	0.972	1
14q-Del	8p-Del	0.972	1
14q-Del	Del_8p23.1	0.972	1
15q-Del	8p-Del	0.972	1
19p-Del	6q-Del	0.972	1
19p-Del	Amp_2p25.1	0.972	1
19p-Del	Del_22q13.32	0.972	1
4p-Del	Amp_12p12.1	0.972	1
4p-Del	Del_12p13.1	0.972	1
6q-Del	Del_22q13.32	0.972	1
9q-Del	Del_14q24.1	0.972	1
Amp_7p21.1	Del_14q24.1	0.972	1
Amp_7p11.2	Amp_19q12	0.972	1
Amp_8q22.3	Amp_16q22.1	0.972	1
Amp_9p24.1	Amp_17q12	0.972	1
Amp_9p24.1	Del_14q24.1	0.972	1
Amp_11q13.3	Amp_16p11.2	0.972	1
Amp_12p12.1	Amp_17q12	0.972	1
Amp_12p12.1	Del_17p12	0.972	1
Amp_17q12	Del_16q23.1	0.972	1
Amp_22q12.2	Del_16q23.1	0.972	1
Del_2q37.1	Del_18q23	0.972	1
Del_22q13.32	Del_Xp11.3	0.972	1
ASXL2	Amp_1q23.3	0.973	1
EP300	ERCC2	0.973	1
ERCC2	Amp_7p21.1	0.973	1
FGFR3	Del_11q25	0.973	1
PHLDA3	PIK3CA	0.973	1
PIK3CA	ACRC	0.973	1
TP53	5p-Amp	0.973	1
5p-Amp	Amp_7p21.1	0.973	1
19p-Del	Del_8p23.1	0.973	1
Amp_3q26.33	Del_4q34.2	0.973	1
Amp_3q26.33	Del_11p15.5	0.973	1
Amp_6q23.3	Del_9q33.2	0.973	1
Amp_20q11.21	Del_1q32.1	0.973	1
Del_1q32.1	Del_9q33.2	0.973	1
Del_4q34.2	Del_11q23.3	0.973	1
Del_11q25	Del_19p13.3	0.973	1
BTG2	ERCC2	0.974	1
BTG2	HRAS	0.974	1
BTG2	ZFP36L1	0.974	1
CREBBP	Amp_11q22.2	0.974	1
ELF3	Amp_17q11.2	0.974	1
EP300	Del_7q36.3	0.974	1
ERCC2	ZFP36L1	0.974	1
ERCC2	Amp_4q13.3	0.974	1
KDM6A	STAG2	0.974	1
PIK3CA	6q-Del	0.974	1
PIK3CA	Del_6p25.3	0.974	1
PIK3CA	Del_22q13.32	0.974	1
ZFP36L1	Amp_4q13.3	0.974	1
20q-Amp	7p-Amp	0.974	1
11p-Del	Amp_3q26.33	0.974	1
5q-Del	Amp_20q11.21	0.974	1
Amp_3q26.33	Del_7q36.3	0.974	1
Amp_17q11.2	Del_2q22.1	0.974	1
Amp_20q11.21	Del_6p25.3	0.974	1
Del_2q37.1	Del_9q33.2	0.974	1
ASXL2	Del_1q32.1	0.975	1
EP300	TPTE	0.975	1
GPC5	Amp_3q26.33	0.975	1
KDM6A	Del_16p13.3	0.975	1
TP53	Amp_3q26.33	0.975	1
TXNIP	Del_11q23.3	0.975	1
TXNIP	Del_11q25	0.975	1
TSC1	Del_9p23	0.975	1
MLL	Amp_10p14	0.975	1
RAD51C	22q-Del	0.975	1
RBM26	19q-Amp	0.975	1
17q-Amp	Amp_8q22.3	0.975	1
19q-Amp	22q-Del	0.975	1
3p-Amp	Amp_8q22.3	0.975	1
3q-Amp	Del_9p23	0.975	1
10q-Del	Amp_1q21.3	0.975	1
11p-Del	4q-Del	0.975	1
11p-Del	Amp_11q13.3	0.975	1
11p-Del	Del_2q34	0.975	1
15q-Del	Amp_8q22.3	0.975	1
22q-Del	Del_1q32.1	0.975	1
22q-Del	Del_Xq21.33	0.975	1
4q-Del	9p-Del	0.975	1
9p-Del	Del_2q34	0.975	1
9q-Del	Del_12p13.1	0.975	1
Amp_1q21.3	Del_15q13.1	0.975	1
Amp_1q23.3	Amp_3q26.33	0.975	1
Amp_6q23.3	Amp_16p13.2	0.975	1
Amp_7p21.1	Amp_9p24.1	0.975	1
Amp_8q22.3	Amp_19q12	0.975	1
Amp_8q22.3	Del_18q23	0.975	1
Amp_10p14	Amp_16p11.2	0.975	1
Amp_10p14	Del_16p13.3	0.975	1
Amp_12p12.1	Del_5q12.1	0.975	1
Amp_16p13.2	Del_Xq21.33	0.975	1
Amp_19q12	Del_17p12	0.975	1
Del_11q23.3	Del_12p13.1	0.975	1
ASXL2	Del_8p23.1	0.976	1
CDKN2A	CEP192	0.976	1
CX3CL1	RHOB	0.976	1
CX3CL1	Del_1p36.11	0.976	1
FOXA1	CEP192	0.976	1
FOXA1	1q-Amp	0.976	1
FOXA1	16p-Del	0.976	1
FOXQ1	CEP192	0.976	1
FOXQ1	ECM1	0.976	1
FOXQ1	1q-Amp	0.976	1
MIPOL1	CEP192	0.976	1
RHOB	CEP192	0.976	1
RHOB	Amp_7p11.2	0.976	1
CEP192	17q-Amp	0.976	1
CEP192	15q-Del	0.976	1
ECM1	17q-Amp	0.976	1
17q-Amp	1q-Amp	0.976	1
19q-Amp	11p-Del	0.976	1
3p-Amp	Amp_7p11.2	0.976	1
3p-Amp	Amp_16q22.1	0.976	1
7q-Amp	Amp_6p22.3	0.976	1
14q-Del	16p-Del	0.976	1
14q-Del	Amp_16q22.1	0.976	1
14q-Del	Del_2q37.1	0.976	1
16p-Del	Del_1p36.11	0.976	1
17p-Del	Amp_3q26.33	0.976	1
8p-Del	Amp_6q23.3	0.976	1
9p-Del	Del_Xq21.33	0.976	1
Amp_3p25.2	Amp_12p12.1	0.976	1
Amp_6p22.3	Amp_17q12	0.976	1
Amp_7p21.1	Del_13q14.2	0.976	1
Amp_10p14	Del_Xq21.33	0.976	1
Amp_13q22.1	Amp_19q12	0.976	1
Amp_17q11.2	Amp_19q12	0.976	1
Del_7q36.3	Del_13q14.2	0.976	1
ASXL2	KLF5	0.977	1
ASXL2	Del_6q27	0.977	1
ASXL2	Del_10q23.31	0.977	1
CDKN1A	RBM26	0.977	1
CDKN2A	Del_6p25.3	0.977	1
FGFR3	20q-Amp	0.977	1
FGFR3	4q-Del	0.977	1
FOXA1	6q-Del	0.977	1
FOXA1	Amp_2p25.1	0.977	1
FOXA1	Amp_19q13.43	0.977	1
MIPOL1	Del_6p25.3	0.977	1
MLL2	4q-Del	0.977	1
RHOB	6q-Del	0.977	1
RHOB	Del_6p25.3	0.977	1
17q-Amp	6q-Del	0.977	1
17q-Amp	Del_6p25.3	0.977	1
20p-Amp	Del_1p36.11	0.977	1
3p-Amp	Amp_2p25.1	0.977	1
3p-Amp	Del_6p25.3	0.977	1
5p-Amp	18q-Del	0.977	1
5p-Amp	Amp_13q22.1	0.977	1
14q-Del	6q-Del	0.977	1
14q-Del	Amp_2p25.1	0.977	1
14q-Del	Del_6p25.3	0.977	1
15q-Del	Amp_19q13.43	0.977	1
19p-Del	4p-Del	0.977	1
5q-Del	Del_9p21.3	0.977	1
5q-Del	Del_17p12	0.977	1
Amp_8p11.23	Amp_16p13.2	0.977	1
Amp_12q15	Amp_17q11.2	0.977	1
Amp_16p11.2	Del_19p13.3	0.977	1
Amp_17q12	Del_Xp11.3	0.977	1
Del_2q37.1	Del_8p23.1	0.977	1
Del_4q22.1	Del_18q23	0.977	1
Del_6p25.3	Del_17p12	0.977	1
Del_9p21.3	Del_17p12	0.977	1
Del_15q13.1	Del_18q23	0.977	1
CDKN1A	11q-Del	0.978	1
ERBB3	RB1	0.978	1
HRAS	FAT1	0.978	1
RB1	Del_16q23.1	0.978	1
RXRA	17p-Del	0.978	1
TPTE	10q-Del	0.978	1
TPTE	Del_15q13.1	0.978	1
TXNIP	3q-Amp	0.978	1
FAT1	Amp_4q13.3	0.978	1
5p-Amp	Del_8p23.1	0.978	1
10q-Del	Amp_9p24.1	0.978	1
11q-Del	Del_6q27	0.978	1
11q-Del	Del_10q23.31	0.978	1
17p-Del	4p-Del	0.978	1
17p-Del	Del_14q24.1	0.978	1
18q-Del	Amp_11q22.2	0.978	1
Amp_4p16.3	Amp_12p12.1	0.978	1
Amp_4p16.3	Del_12p13.1	0.978	1
Amp_4q13.3	Amp_17q11.2	0.978	1
Amp_6p22.3	Amp_13q22.1	0.978	1
Amp_6p22.3	Amp_17q11.2	0.978	1
Amp_9p24.1	Del_2q22.1	0.978	1
Amp_9p24.1	Del_15q13.1	0.978	1
Amp_12p12.1	Del_15q13.1	0.978	1
Del_4q34.2	Del_8p23.1	0.978	1
ERCC2	Del_13q14.2	0.979	1
GPC5	17p-Del	0.979	1
GPC5	Del_9p23	0.979	1
KDM6A	TXNIP	0.979	1
MLL2	Amp_1q23.3	0.979	1
RXRA	20p-Amp	0.979	1
RXRA	5q-Del	0.979	1
RXRA	6q-Del	0.979	1
RXRA	Amp_2p25.1	0.979	1
RXRA	Del_6p25.3	0.979	1
RXRA	Del_22q13.32	0.979	1
SPTAN1	Del_11p15.5	0.979	1
TP53	Amp_20q11.21	0.979	1
TPTE	Amp_1q21.3	0.979	1
ACRC	Del_2q37.1	0.979	1
RAD51C	Del_2q37.1	0.979	1
19q-Amp	Del_2q37.1	0.979	1
20p-Amp	7q-Amp	0.979	1
20p-Amp	11p-Del	0.979	1
7q-Amp	Amp_2p25.1	0.979	1
17p-Del	Del_12p13.1	0.979	1
4q-Del	Amp_7p11.2	0.979	1
5q-Del	9p-Del	0.979	1
6q-Del	Amp_17q12	0.979	1
8p-Del	Amp_19q13.43	0.979	1
8p-Del	Del_22q13.32	0.979	1
Amp_1q21.3	Amp_9p24.1	0.979	1
Amp_1q21.3	Amp_12p12.1	0.979	1
Amp_6p22.3	Amp_11q22.2	0.979	1
Amp_6q23.3	Del_2q37.1	0.979	1
Amp_7p11.2	Amp_16p11.2	0.979	1
Amp_8q22.3	Amp_16p13.2	0.979	1
Amp_9p24.1	Del_13q14.2	0.979	1
Amp_10p14	Del_6p25.3	0.979	1
Amp_12q15	Del_9q33.2	0.979	1
Amp_16q22.1	Del_9p21.3	0.979	1
Del_1q32.1	Del_2q37.1	0.979	1
Del_4q34.2	Del_13q14.2	0.979	1
Del_6p25.3	Del_14q24.1	0.979	1
CDKN1A	ECM1	0.98	1
CDKN1A	16p-Del	0.98	1
CX3CL1	Del_6q27	0.98	1
CX3CL1	Del_10q23.31	0.98	1
ELF3	19p-Del	0.98	1
EP300	Del_8p23.1	0.98	1
GPC5	RAD51C	0.98	1
GPC5	19q-Amp	0.98	1
KDM6A	Del_17p12	0.98	1
SPTAN1	TSC1	0.98	1
SPTAN1	10q-Del	0.98	1
SPTAN1	Del_4q22.1	0.98	1
TPTE	ACRC	0.98	1
TPTE	RAD51C	0.98	1
TPTE	19q-Amp	0.98	1
TPTE	Del_1q32.1	0.98	1
TXNIP	Amp_6q23.3	0.98	1
TXNIP	Del_1q32.1	0.98	1
TSC1	19p-Del	0.98	1
CEP192	Amp_17q23.3	0.98	1
CEP192	Del_6q27	0.98	1
ECM1	Amp_8p11.23	0.98	1
ECM1	Amp_17q23.3	0.98	1
RAD51C	Amp_9p24.1	0.98	1
1q-Amp	Amp_17q23.3	0.98	1
3q-Amp	19p-Del	0.98	1
8q-Amp	Del_15q13.1	0.98	1
10q-Del	19p-Del	0.98	1
11q-Del	16p-Del	0.98	1
11q-Del	Amp_1q23.3	0.98	1
16p-Del	Amp_17q23.3	0.98	1
16p-Del	Del_3p14.2	0.98	1
19p-Del	Del_4q22.1	0.98	1
8p-Del	Amp_7p11.2	0.98	1
8p-Del	Del_2q37.1	0.98	1
Amp_1q23.3	Amp_17q23.3	0.98	1
Amp_1q23.3	Del_10q23.31	0.98	1
Amp_2p25.1	Amp_8p11.23	0.98	1
Amp_2p25.1	Amp_17q23.3	0.98	1
Amp_2p25.1	Del_6q27	0.98	1
Amp_6q21	Amp_9p24.1	0.98	1
Amp_6q23.3	Amp_12p12.1	0.98	1
Amp_8p11.23	Amp_16q22.1	0.98	1
Amp_12p12.1	Del_Xq21.33	0.98	1
Amp_17q23.3	Amp_19q13.43	0.98	1
Del_1q32.1	Del_12p13.1	0.98	1
Del_2q22.1	Del_Xp11.3	0.98	1
Del_2q37.1	Del_5q12.1	0.98	1
Del_3p14.2	Del_9p21.3	0.98	1
Del_4q22.1	Del_8p23.1	0.98	1
RB1	Amp_7p11.2	0.981	1
RB1	Del_2q37.1	0.981	1
MLL	Amp_7p11.2	0.981	1
20q-Amp	Del_5q12.1	0.981	1
4q-Del	Del_17p12	0.981	1
Amp_1q23.3	Amp_2p25.1	0.981	1
Amp_3p25.2	Amp_19q12	0.981	1
Amp_6p22.3	Amp_10p14	0.981	1
Amp_6p22.3	Del_6q27	0.981	1
Amp_7p11.2	Del_16p13.3	0.981	1
Amp_8p11.23	Del_7q36.3	0.981	1
Amp_16p13.2	Del_2q34	0.981	1
Del_2q37.1	Del_16p13.3	0.981	1
Del_3p14.2	Del_7q36.3	0.981	1
Del_6q27	Del_7q36.3	0.981	1
ASXL2	Del_9q33.2	0.982	1
BTG2	CX3CL1	0.982	1
BTG2	SPTAN1	0.982	1
BTG2	CEP192	0.982	1
BTG2	8q-Amp	0.982	1
BTG2	16p-Del	0.982	1
BTG2	Amp_16q22.1	0.982	1
BTG2	Del_16q23.1	0.982	1
CDKN2A	7q-Amp	0.982	1
CX3CL1	HRAS	0.982	1
CX3CL1	MLL2	0.982	1
EP300	Del_2q22.1	0.982	1
FBXW7	MIPOL1	0.982	1
HRAS	8q-Amp	0.982	1
MIPOL1	Amp_17q12	0.982	1
MLL2	CEP192	0.982	1
RHOB	RXRA	0.982	1
RHOB	7q-Amp	0.982	1
RHOB	4p-Del	0.982	1
RXRA	15q-Del	0.982	1
TP53	Amp_7p11.2	0.982	1
TSC1	9q-Del	0.982	1
ECM1	Amp_4q13.3	0.982	1
17q-Amp	Del_14q24.1	0.982	1
1q-Amp	Amp_4q13.3	0.982	1
3p-Amp	Amp_22q12.2	0.982	1
8q-Amp	Amp_11q22.2	0.982	1
10q-Del	Del_11q23.3	0.982	1
10q-Del	Del_11q25	0.982	1
22q-Del	Amp_20q11.21	0.982	1
4q-Del	Amp_13q22.1	0.982	1
9q-Del	Del_4q22.1	0.982	1
Amp_1p34.2	Amp_13q22.1	0.982	1
Amp_3p25.2	Amp_10p14	0.982	1
Amp_3q26.33	Del_2q22.1	0.982	1
Amp_4p16.3	Del_5q12.1	0.982	1
Amp_4p16.3	Del_11q25	0.982	1
Amp_4q13.3	Amp_16q22.1	0.982	1
Amp_11q22.2	Amp_16q22.1	0.982	1
Amp_22q12.2	Del_1p36.11	0.982	1
Del_1p36.11	Del_14q24.1	0.982	1
Del_2q22.1	Del_11q23.3	0.982	1
Del_4q22.1	Del_5q12.1	0.982	1
Del_5q12.1	Del_15q13.1	0.982	1
CDKN2A	Del_18q23	0.983	1
CX3CL1	Del_2q34	0.983	1
ERBB3	FGFR3	0.983	1
ERBB3	Del_19p13.3	0.983	1
FGFR3	SPTAN1	0.983	1
RB1	16p-Del	0.983	1
17q-Amp	Amp_19q12	0.983	1
1q-Amp	Amp_11q13.3	0.983	1
3p-Amp	Del_18q23	0.983	1
3q-Amp	Del_9p21.3	0.983	1
8q-Amp	Amp_12q15	0.983	1
11p-Del	Amp_12q15	0.983	1
11p-Del	Del_19p13.3	0.983	1
15q-Del	Amp_19q12	0.983	1
15q-Del	Del_18q23	0.983	1
22q-Del	Amp_16p13.2	0.983	1
6q-Del	Del_2q37.1	0.983	1
8p-Del	Del_19p13.3	0.983	1
9p-Del	Del_19p13.3	0.983	1
Amp_2p25.1	Amp_7p11.2	0.983	1
Amp_4p16.3	Del_9p21.3	0.983	1
Amp_16q22.1	Del_16p13.3	0.983	1
Del_2q34	Del_7q36.3	0.983	1
Del_2q37.1	Del_6p25.3	0.983	1
Del_5q12.1	Del_17p12	0.983	1
Del_6q27	Del_8p23.1	0.983	1
Del_7q36.3	Del_16p13.3	0.983	1
BTG2	PIK3CA	0.984	1
KDM6A	Amp_19q13.43	0.984	1
KLF5	19p-Del	0.984	1
RB1	Del_10q23.31	0.984	1
RB1	Del_22q13.32	0.984	1
SPTAN1	Del_18q23	0.984	1
TP53	MLL	0.984	1
TP53	Amp_11q13.3	0.984	1
20p-Amp	Del_16p13.3	0.984	1
11q-Del	Del_18q23	0.984	1
16p-Del	Del_17p12	0.984	1
4q-Del	Amp_12p12.1	0.984	1
4q-Del	Del_12p13.1	0.984	1
5q-Del	Del_9p23	0.984	1
Amp_1p34.2	Amp_9p24.1	0.984	1
Amp_1q21.3	Del_22q13.32	0.984	1
Amp_2p25.1	Del_8p23.1	0.984	1
Amp_6q21	Amp_19q12	0.984	1
Amp_9p24.1	Amp_16p11.2	0.984	1
Amp_11q13.3	Amp_19q13.43	0.984	1
Amp_11q13.3	Del_3p14.2	0.984	1
Amp_16p11.2	Del_Xp11.3	0.984	1
Amp_17q12	Amp_20q11.21	0.984	1
Amp_19q12	Del_6q27	0.984	1
Del_2q34	Del_6p25.3	0.984	1
Del_6q27	Del_18q23	0.984	1
Del_16p13.3	Del_22q13.32	0.984	1
Del_17p12	Del_Xp11.3	0.984	1
ASXL2	11p-Del	0.985	1
ASXL2	Del_4q34.2	0.985	1
CDKN2A	19q-Amp	0.985	1
CDKN2A	Del_1q32.1	0.985	1
CREBBP	Del_7q36.3	0.985	1
FOXA1	RAD51C	0.985	1
FOXA1	Del_Xq21.33	0.985	1
FOXQ1	PHLDA3	0.985	1
FOXQ1	Amp_6q23.3	0.985	1
FOXQ1	Del_1q32.1	0.985	1
MIPOL1	MLL2	0.985	1
MIPOL1	Amp_6q23.3	0.985	1
MIPOL1	Del_1q32.1	0.985	1
MLL2	RHOB	0.985	1
NFE2L2	5q-Del	0.985	1
TSC1	17p-Del	0.985	1
ACRC	3p-Amp	0.985	1
ACRC	Del_1p36.11	0.985	1
RAD51C	14q-Del	0.985	1
RAD51C	15q-Del	0.985	1
17q-Amp	19q-Amp	0.985	1
17q-Amp	Amp_6q21	0.985	1
17q-Amp	Del_1q32.1	0.985	1
17q-Amp	Del_Xq21.33	0.985	1
19q-Amp	14q-Del	0.985	1
20p-Amp	7p-Amp	0.985	1
3p-Amp	Del_Xq21.33	0.985	1
3q-Amp	17p-Del	0.985	1
3q-Amp	Del_6p25.3	0.985	1
7p-Amp	Amp_2p25.1	0.985	1
7q-Amp	Amp_22q12.2	0.985	1
10q-Del	5q-Del	0.985	1
10q-Del	Del_22q13.32	0.985	1
14q-Del	Amp_6q23.3	0.985	1
15q-Del	Amp_6q21	0.985	1
15q-Del	Del_Xq21.33	0.985	1
17p-Del	Del_15q13.1	0.985	1
22q-Del	8p-Del	0.985	1
22q-Del	Del_4q34.2	0.985	1
22q-Del	Del_19p13.3	0.985	1
8p-Del	Amp_16p13.2	0.985	1
Amp_1q23.3	Amp_10p14	0.985	1
Amp_1q23.3	Amp_17q11.2	0.985	1
Amp_2p25.1	Amp_4p16.3	0.985	1
Amp_5p15.33	Del_Xp11.3	0.985	1
Amp_12q15	Del_7q36.3	0.985	1
Amp_19q13.43	Del_15q13.1	0.985	1
Del_2q22.1	Del_6p25.3	0.985	1
Del_4q22.1	Del_13q14.2	0.985	1
Del_4q34.2	Del_7q36.3	0.985	1
BTG2	Amp_2p25.1	0.986	1
BTG2	Del_22q13.32	0.986	1
CDKN1A	Del_12p13.1	0.986	1
ELF3	RHOB	0.986	1
EP300	PHLDA3	0.986	1
EP300	15q-Del	0.986	1
EP300	Amp_6q23.3	0.986	1
ERBB3	Amp_6p22.3	0.986	1
FOXA1	NFE2L2	0.986	1
FOXA1	9q-Del	0.986	1
FOXA1	Del_11q23.3	0.986	1
FOXA1	Del_11q25	0.986	1
FOXQ1	Amp_3q26.33	0.986	1
GPC5	Del_6q27	0.986	1
HRAS	Amp_2p25.1	0.986	1
KDM6A	Amp_1p34.2	0.986	1
KLF5	Del_18q23	0.986	1
NFE2L2	Del_1p36.11	0.986	1
PHLDA3	Amp_3q26.33	0.986	1
PIK3CA	FAT1	0.986	1
RHOB	7p-Amp	0.986	1
RHOB	10q-Del	0.986	1
RHOB	Del_4q22.1	0.986	1
TPTE	Amp_8p11.23	0.986	1
TPTE	Del_6q27	0.986	1
TPTE	Del_10q23.31	0.986	1
ZFP36L1	Amp_10p14	0.986	1
ZFP36L1	Del_6p25.3	0.986	1
ACRC	Amp_7p21.1	0.986	1
ACRC	Del_5q12.1	0.986	1
ECM1	Amp_5p15.33	0.986	1
ECM1	Del_4q34.2	0.986	1
19q-Amp	Amp_3q26.33	0.986	1
1q-Amp	Amp_3p25.2	0.986	1
1q-Amp	Del_4q34.2	0.986	1
3p-Amp	Amp_7p21.1	0.986	1
3p-Amp	Del_11q23.3	0.986	1
3p-Amp	Del_11q25	0.986	1
11q-Del	Amp_12p12.1	0.986	1
14q-Del	9q-Del	0.986	1
14q-Del	Del_11q25	0.986	1
16p-Del	Amp_5p15.33	0.986	1
16p-Del	Del_4q34.2	0.986	1
16p-Del	Del_19p13.3	0.986	1
17p-Del	18q-Del	0.986	1
4p-Del	Del_10q23.31	0.986	1
4q-Del	Amp_19q12	0.986	1
8p-Del	Amp_1q21.3	0.986	1
9q-Del	Del_Xq21.33	0.986	1
Amp_1q21.3	Amp_16p11.2	0.986	1
Amp_2p25.1	Amp_4q13.3	0.986	1
Amp_3q26.33	Amp_6q23.3	0.986	1
Amp_3q26.33	Del_1p36.11	0.986	1
Amp_3q26.33	Del_9p21.3	0.986	1
Amp_3q26.33	Del_Xq21.33	0.986	1
Amp_4q13.3	Amp_19q13.43	0.986	1
Amp_6q21	Amp_7p21.1	0.986	1
Amp_9p24.1	Del_10q23.31	0.986	1
Amp_16p11.2	Amp_19q12	0.986	1
Amp_16q22.1	Del_4q34.2	0.986	1
Amp_22q12.2	Del_10q23.31	0.986	1
Del_1p36.11	Del_11q23.3	0.986	1
Del_1p36.11	Del_11q25	0.986	1
Del_1q32.1	Del_5q12.1	0.986	1
Del_1q32.1	Del_11q23.3	0.986	1
Del_3p14.2	Del_14q24.1	0.986	1
ASXL2	19p-Del	0.987	1
CDKN1A	Amp_5p15.33	0.987	1
RXRA	Del_17p12	0.987	1
SPTAN1	Del_9p21.3	0.987	1
STAG2	Del_9p21.3	0.987	1
TP53	ZFP36L1	0.987	1
20q-Amp	Amp_11p13	0.987	1
5p-Amp	Amp_7p11.2	0.987	1
11p-Del	4p-Del	0.987	1
22q-Del	Del_Xp11.3	0.987	1
6q-Del	Del_11p15.5	0.987	1
8p-Del	Del_14q24.1	0.987	1
9p-Del	Del_14q24.1	0.987	1
Amp_5p15.33	Amp_8p11.23	0.987	1
Amp_5p15.33	Del_5q12.1	0.987	1
Amp_5p15.33	Del_10q23.31	0.987	1
Amp_8p11.23	Amp_8q22.3	0.987	1
Amp_8q22.3	Amp_17q23.3	0.987	1
Amp_8q22.3	Del_6p25.3	0.987	1
Amp_13q22.1	Del_7q36.3	0.987	1
Amp_17q11.2	Del_7q36.3	0.987	1
Del_2q37.1	Del_4q34.2	0.987	1
Del_11p15.5	Del_22q13.32	0.987	1
ASXL2	Amp_9p24.1	0.988	1
CDKN1A	9q-Del	0.988	1
CDKN1A	Del_9q33.2	0.988	1
CDKN1A	Del_11q23.3	0.988	1
ERCC2	Del_22q13.32	0.988	1
FGFR3	20p-Amp	0.988	1
FGFR3	5q-Del	0.988	1
RB1	Del_2q34	0.988	1
RHOB	17p-Del	0.988	1
SPTAN1	18q-Del	0.988	1
STAG2	20q-Amp	0.988	1
CEP192	16p-Del	0.988	1
ECM1	1q-Amp	0.988	1
ECM1	16p-Del	0.988	1
ECM1	Amp_13q22.1	0.988	1
ECM1	Amp_16q22.1	0.988	1
ECM1	Amp_17q11.2	0.988	1
RAD51C	Del_13q14.2	0.988	1
RBM26	Amp_9p24.1	0.988	1
1q-Amp	16p-Del	0.988	1
1q-Amp	Amp_17q11.2	0.988	1
20q-Amp	16p-Del	0.988	1
8q-Amp	Amp_17q11.2	0.988	1
11q-Del	Amp_3q26.33	0.988	1
11q-Del	Del_4q34.2	0.988	1
14q-Del	17p-Del	0.988	1
16p-Del	18q-Del	0.988	1
16p-Del	Amp_17q11.2	0.988	1
17p-Del	Del_1q32.1	0.988	1
18q-Del	Del_8p23.1	0.988	1
9q-Del	Del_10q23.31	0.988	1
Amp_1q23.3	Amp_9p24.1	0.988	1
Amp_1q23.3	Del_16p13.3	0.988	1
Amp_2p25.1	Del_4q34.2	0.988	1
Amp_3p25.2	Del_2q37.1	0.988	1
Amp_3q26.33	Del_6q27	0.988	1
Amp_7p21.1	Del_10q23.31	0.988	1
Amp_8p11.23	Del_5q12.1	0.988	1
Amp_12q15	Amp_19q13.43	0.988	1
Amp_17q11.2	Del_16q23.1	0.988	1
Amp_20q11.21	Del_3p14.2	0.988	1
Amp_20q11.21	Del_6q27	0.988	1
Del_2q34	Del_16p13.3	0.988	1
Del_5q12.1	Del_6q27	0.988	1
Del_6p25.3	Del_19p13.3	0.988	1
Del_6q27	Del_11q23.3	0.988	1
Del_10q23.31	Del_11q25	0.988	1
Del_11p15.5	Del_Xp11.3	0.988	1
Del_13q14.2	Del_Xq21.33	0.988	1
ASXL2	18q-Del	0.989	1
ASXL2	Amp_17q11.2	0.989	1
BTG2	FBXW7	0.989	1
BTG2	19q-Amp	0.989	1
BTG2	Del_1q32.1	0.989	1
BTG2	Del_Xq21.33	0.989	1
EP300	4q-Del	0.989	1
FOXQ1	Amp_3p25.2	0.989	1
HRAS	PHLDA3	0.989	1
HRAS	RAD51C	0.989	1
PHLDA3	ZFP36L1	0.989	1
RB1	TXNIP	0.989	1
RHOB	4q-Del	0.989	1
RXRA	Del_2q37.1	0.989	1
TPTE	MLL	0.989	1
ZFP36L1	RAD51C	0.989	1
ZFP36L1	19q-Amp	0.989	1
ZFP36L1	Amp_6q21	0.989	1
MLL	Amp_9p24.1	0.989	1
20q-Amp	11p-Del	0.989	1
7q-Amp	Amp_11q22.2	0.989	1
10q-Del	Del_14q24.1	0.989	1
15q-Del	Amp_16p11.2	0.989	1
18q-Del	9p-Del	0.989	1
4p-Del	Amp_7p11.2	0.989	1
4p-Del	Del_2q37.1	0.989	1
4q-Del	Amp_7p21.1	0.989	1
6q-Del	Del_18q23	0.989	1
8p-Del	Amp_17q11.2	0.989	1
Amp_3q26.33	Amp_19q12	0.989	1
Amp_4p16.3	Del_14q24.1	0.989	1
Amp_4q13.3	Amp_6q21	0.989	1
Amp_5p15.33	Del_14q24.1	0.989	1
Amp_7p21.1	Amp_19q12	0.989	1
Amp_7p11.2	Amp_22q12.2	0.989	1
Amp_19q12	Del_11p15.5	0.989	1
Amp_19q12	Del_16p13.3	0.989	1
Amp_22q12.2	Del_16p13.3	0.989	1
Del_2q34	Del_14q24.1	0.989	1
Del_2q37.1	Del_14q24.1	0.989	1
Del_5q12.1	Del_18q23	0.989	1
CDKN1A	Del_9p23	0.99	1
CX3CL1	8q-Amp	0.99	1
CX3CL1	Del_16q23.1	0.99	1
KDM6A	11q-Del	0.99	1
KDM6A	Del_11q25	0.99	1
RB1	Del_8p23.1	0.99	1
STAG2	1q-Amp	0.99	1
STAG2	17p-Del	0.99	1
TSC1	Del_9q33.2	0.99	1
CEP192	Del_16q23.1	0.99	1
20p-Amp	Amp_11p13	0.99	1
8q-Amp	Amp_16q22.1	0.99	1
10q-Del	Amp_20q11.21	0.99	1
10q-Del	Del_9q33.2	0.99	1
4q-Del	5q-Del	0.99	1
4q-Del	Amp_2p25.1	0.99	1
6q-Del	Del_7q36.3	0.99	1
Amp_1q21.3	Amp_8q22.3	0.99	1
Amp_1q21.3	Amp_17q11.2	0.99	1
Amp_1q21.3	Amp_17q23.3	0.99	1
Amp_3q26.33	Del_9p23	0.99	1
Amp_8q22.3	Amp_17q11.2	0.99	1
Amp_9p24.1	Del_8p23.1	0.99	1
Amp_11q22.2	Del_8p23.1	0.99	1
Amp_16p11.2	Del_22q13.32	0.99	1
Amp_20q11.21	Del_2q22.1	0.99	1
Del_2q34	Del_8p23.1	0.99	1
Del_2q34	Del_17p12	0.99	1
Del_8p23.1	Del_17p12	0.99	1
Del_9p23	Del_11q25	0.99	1
ASXL2	Del_16q23.1	0.991	1
CDKN1A	Amp_4p16.3	0.991	1
ERBB3	PIK3CA	0.991	1
ERBB3	SPTAN1	0.991	1
ERCC2	Amp_9p24.1	0.991	1
PIK3CA	SPTAN1	0.991	1
PIK3CA	TXNIP	0.991	1
SPTAN1	22q-Del	0.991	1
TP53	Del_8p23.1	0.991	1
ZFP36L1	TSC1	0.991	1
TSC1	Amp_17q23.3	0.991	1
RAD51C	Del_3p14.2	0.991	1
17q-Amp	Amp_1q21.3	0.991	1
19q-Amp	Del_6q27	0.991	1
20q-Amp	6q-Del	0.991	1
3q-Amp	11q-Del	0.991	1
10q-Del	11q-Del	0.991	1
11q-Del	Del_1q32.1	0.991	1
11q-Del	Del_2q22.1	0.991	1
14q-Del	Del_9p23	0.991	1
15q-Del	Amp_1q21.3	0.991	1
17p-Del	4q-Del	0.991	1
17p-Del	Del_6q27	0.991	1
17p-Del	Del_10q23.31	0.991	1
18q-Del	6q-Del	0.991	1
18q-Del	Del_6p25.3	0.991	1
22q-Del	Del_16q23.1	0.991	1
6q-Del	Amp_17q11.2	0.991	1
8p-Del	Amp_8p11.23	0.991	1
8p-Del	Del_6q27	0.991	1
Amp_1q21.3	Del_2q37.1	0.991	1
Amp_1q23.3	Amp_6q23.3	0.991	1
Amp_1q23.3	Amp_22q12.2	0.991	1
Amp_1q23.3	Del_1q32.1	0.991	1
Amp_1q23.3	Del_Xq21.33	0.991	1
Amp_3p25.2	Del_17p12	0.991	1
Amp_8q22.3	Amp_12p12.1	0.991	1
Amp_20q11.21	Del_5q12.1	0.991	1
Del_3p14.2	Del_Xq21.33	0.991	1
Del_4q22.1	Del_10q23.31	0.991	1
Del_8p23.1	Del_11p15.5	0.991	1
ASXL2	14q-Del	0.992	1
CREBBP	MLL2	0.992	1
CREBBP	RB1	0.992	1
CX3CL1	Amp_19q13.43	0.992	1
EP300	Del_16p13.3	0.992	1
ERCC2	FBXW7	0.992	1
FBXW7	Amp_11p13	0.992	1
FBXW7	Del_7q36.3	0.992	1
FGFR3	Del_14q24.1	0.992	1
FOXA1	11q-Del	0.992	1
GPC5	Del_12p13.1	0.992	1
RB1	5p-Amp	0.992	1
RB1	Del_19p13.3	0.992	1
RHOB	19p-Del	0.992	1
TP53	Amp_16p11.2	0.992	1
CEP192	6q-Del	0.992	1
1q-Amp	Amp_19q13.43	0.992	1
20p-Amp	16p-Del	0.992	1
3p-Amp	Amp_8p11.23	0.992	1
5p-Amp	7q-Amp	0.992	1
7p-Amp	Amp_10p14	0.992	1
7q-Amp	Amp_11p13	0.992	1
7q-Amp	Del_7q36.3	0.992	1
10q-Del	8p-Del	0.992	1
10q-Del	Del_4q22.1	0.992	1
11p-Del	Amp_4p16.3	0.992	1
11p-Del	Amp_12p12.1	0.992	1
11p-Del	Del_15q13.1	0.992	1
11q-Del	14q-Del	0.992	1
11q-Del	18q-Del	0.992	1
14q-Del	Del_3p14.2	0.992	1
14q-Del	Del_6q27	0.992	1
14q-Del	Del_10q23.31	0.992	1
14q-Del	Del_11p15.5	0.992	1
15q-Del	Del_6q27	0.992	1
16p-Del	5q-Del	0.992	1
16p-Del	Amp_19q13.43	0.992	1
18q-Del	Del_6q27	0.992	1
19p-Del	Del_9q33.2	0.992	1
22q-Del	Del_1p36.11	0.992	1
4p-Del	Del_7q36.3	0.992	1
8p-Del	Del_15q13.1	0.992	1
9p-Del	Amp_12p12.1	0.992	1
9p-Del	Del_4q22.1	0.992	1
9q-Del	Del_5q12.1	0.992	1
Amp_2p25.1	Amp_7p21.1	0.992	1
Amp_2p25.1	Del_5q12.1	0.992	1
Amp_3p25.2	Amp_16p13.2	0.992	1
Amp_3p25.2	Del_16p13.3	0.992	1
Amp_3q26.33	Del_11q25	0.992	1
Amp_4q13.3	Amp_19q12	0.992	1
Amp_5p15.33	Amp_11q13.3	0.992	1
Amp_5p15.33	Amp_16p13.2	0.992	1
Amp_6p22.3	Amp_19q13.43	0.992	1
Amp_6p22.3	Del_22q13.32	0.992	1
Amp_6q23.3	Del_8p23.1	0.992	1
Amp_7p21.1	Del_16p13.3	0.992	1
Amp_7p11.2	Amp_13q22.1	0.992	1
Amp_8q22.3	Amp_11q13.3	0.992	1
Amp_8q22.3	Del_8p23.1	0.992	1
Amp_12q15	Amp_22q12.2	0.992	1
Amp_12q15	Del_16p13.3	0.992	1
Amp_16q22.1	Del_22q13.32	0.992	1
Amp_19q13.43	Del_5q12.1	0.992	1
Amp_19q13.43	Del_11q23.3	0.992	1
Amp_19q13.43	Del_11q25	0.992	1
Del_1p36.11	Del_10q23.31	0.992	1
Del_2q34	Del_4q34.2	0.992	1
Del_4q34.2	Del_18q23	0.992	1
Del_9q33.2	Del_Xp11.3	0.992	1
Del_13q14.2	Del_18q23	0.992	1
BTG2	Del_11q23.3	0.993	1
CX3CL1	ACRC	0.993	1
EP300	HRAS	0.993	1
GPC5	18q-Del	0.993	1
PHLDA3	ECM1	0.993	1
TPTE	FAT1	0.993	1
ZFP36L1	Amp_3q26.33	0.993	1
ACRC	Del_2q34	0.993	1
CEP192	RAD51C	0.993	1
MLL	RAD51C	0.993	1
RAD51C	Del_2q34	0.993	1
19q-Amp	Amp_16q22.1	0.993	1
19q-Amp	Del_2q34	0.993	1
1q-Amp	Del_Xq21.33	0.993	1
7p-Amp	Amp_11p13	0.993	1
7p-Amp	Del_7q36.3	0.993	1
8q-Amp	Amp_3p25.2	0.993	1
8q-Amp	Amp_10p14	0.993	1
10q-Del	Del_2q34	0.993	1
10q-Del	Del_16p13.3	0.993	1
11p-Del	19p-Del	0.993	1
19p-Del	9p-Del	0.993	1
22q-Del	Amp_1q21.3	0.993	1
8p-Del	Del_17p12	0.993	1
9p-Del	Del_Xp11.3	0.993	1
Amp_1q21.3	Amp_16p13.2	0.993	1
Amp_1q21.3	Del_11p15.5	0.993	1
Amp_1q23.3	Del_5q12.1	0.993	1
Amp_4p16.3	Del_17p12	0.993	1
Amp_6q23.3	Amp_8q22.3	0.993	1
Amp_7p21.1	Amp_10p14	0.993	1
Amp_8q22.3	Amp_22q12.2	0.993	1
Amp_9p24.1	Amp_17q11.2	0.993	1
Amp_10p14	Del_16q23.1	0.993	1
Amp_11q13.3	Del_Xq21.33	0.993	1
Amp_16q22.1	Del_1q32.1	0.993	1
Amp_20q11.21	Del_16p13.3	0.993	1
Del_1q32.1	Del_2q34	0.993	1
Del_2q22.1	Del_17p12	0.993	1
Del_2q34	Del_Xq21.33	0.993	1
Del_4q22.1	Del_7q36.3	0.993	1
Del_11p15.5	Del_14q24.1	0.993	1
Del_15q13.1	Del_17p12	0.993	1
Del_16p13.3	Del_Xq21.33	0.993	1
ASXL2	9q-Del	0.994	1
CDKN2A	Amp_11q13.3	0.994	1
CREBBP	ERCC2	0.994	1
CREBBP	RAD51C	0.994	1
CREBBP	Del_1q32.1	0.994	1
CX3CL1	RXRA	0.994	1
ERBB3	6q-Del	0.994	1
ERCC2	Amp_6q21	0.994	1
FGFR3	Del_1q32.1	0.994	1
FGFR3	Del_4q34.2	0.994	1
FGFR3	Del_5q12.1	0.994	1
FGFR3	Del_11q23.3	0.994	1
FGFR3	Del_17p12	0.994	1
KLF5	ZFP36L1	0.994	1
PIK3CA	TP53	0.994	1
PIK3CA	CEP192	0.994	1
RB1	8p-Del	0.994	1
RXRA	18q-Del	0.994	1
RXRA	Del_18q23	0.994	1
SPTAN1	5q-Del	0.994	1
SPTAN1	Del_9p23	0.994	1
ZFP36L1	Amp_1p34.2	0.994	1
CEP192	Del_14q24.1	0.994	1
20p-Amp	17p-Del	0.994	1
20q-Amp	Del_16p13.3	0.994	1
3p-Amp	Del_2q34	0.994	1
5p-Amp	Amp_6q23.3	0.994	1
8q-Amp	Amp_2p25.1	0.994	1
10q-Del	Del_2q37.1	0.994	1
11q-Del	Del_2q37.1	0.994	1
15q-Del	Amp_11q13.3	0.994	1
16p-Del	Amp_17q12	0.994	1
16p-Del	Amp_22q12.2	0.994	1
17p-Del	6q-Del	0.994	1
17p-Del	Amp_20q11.21	0.994	1
18q-Del	Del_14q24.1	0.994	1
22q-Del	6q-Del	0.994	1
22q-Del	Del_11p15.5	0.994	1
4q-Del	Del_7q36.3	0.994	1
8p-Del	Del_2q34	0.994	1
Amp_1p34.2	Amp_11p13	0.994	1
Amp_1q21.3	Amp_11q13.3	0.994	1
Amp_1q23.3	Del_4q34.2	0.994	1
Amp_2p25.1	Del_16q23.1	0.994	1
Amp_4p16.3	Amp_5p15.33	0.994	1
Amp_6q23.3	Del_4q34.2	0.994	1
Amp_10p14	Del_2q34	0.994	1
Amp_12p12.1	Del_2q37.1	0.994	1
Amp_16p13.2	Amp_19q13.43	0.994	1
Amp_17q11.2	Amp_22q12.2	0.994	1
Amp_19q12	Del_14q24.1	0.994	1
Del_1q32.1	Del_4q34.2	0.994	1
Del_2q22.1	Del_2q37.1	0.994	1
Del_2q37.1	Del_3p14.2	0.994	1
Del_2q37.1	Del_15q13.1	0.994	1
Del_4q34.2	Del_5q12.1	0.994	1
Del_6p25.3	Del_16q23.1	0.994	1
Del_9p23	Del_17p12	0.994	1
Del_14q24.1	Del_18q23	0.994	1
Del_16q23.1	Del_22q13.32	0.994	1
Del_17p12	Del_19p13.3	0.994	1
ASXL2	4p-Del	0.995	1
BTG2	22q-Del	0.995	1
ELF3	Del_4q34.2	0.995	1
EP300	Amp_17q12	0.995	1
ERBB3	GPC5	0.995	1
FGFR3	10q-Del	0.995	1
FGFR3	14q-Del	0.995	1
FGFR3	Del_4q22.1	0.995	1
FOXA1	Del_19p13.3	0.995	1
KDM6A	TP53	0.995	1
PIK3CA	Del_19p13.3	0.995	1
RHOB	Del_4q34.2	0.995	1
RHOB	Del_19p13.3	0.995	1
SPTAN1	TPTE	0.995	1
SPTAN1	Amp_8p11.23	0.995	1
TP53	Amp_1q21.3	0.995	1
TPTE	14q-Del	0.995	1
TPTE	15q-Del	0.995	1
TPTE	Del_16q23.1	0.995	1
TXNIP	14q-Del	0.995	1
ECM1	8p-Del	0.995	1
17q-Amp	Amp_9p24.1	0.995	1
19q-Amp	Amp_17q11.2	0.995	1
5p-Amp	7p-Amp	0.995	1
8q-Amp	Amp_12p12.1	0.995	1
8q-Amp	Amp_17q23.3	0.995	1
14q-Del	Del_19p13.3	0.995	1
16p-Del	8p-Del	0.995	1
4p-Del	Amp_7p21.1	0.995	1
6q-Del	Amp_20q11.21	0.995	1
8p-Del	Amp_5p15.33	0.995	1
8p-Del	Amp_6p22.3	0.995	1
9p-Del	Del_2q37.1	0.995	1
9q-Del	Del_2q37.1	0.995	1
Amp_3p25.2	Amp_6p22.3	0.995	1
Amp_4p16.3	Amp_12q15	0.995	1
Amp_6p22.3	Amp_22q12.2	0.995	1
Amp_10p14	Amp_16q22.1	0.995	1
Amp_16p11.2	Del_2q22.1	0.995	1
Amp_16p11.2	Del_10q23.31	0.995	1
Amp_19q13.43	Amp_20q11.21	0.995	1
Del_2q34	Del_11p15.5	0.995	1
Del_8p23.1	Del_19p13.3	0.995	1
Del_11p15.5	Del_16p13.3	0.995	1
BTG2	Del_3p14.2	0.996	1
CDKN2A	Amp_20q11.21	0.996	1
CX3CL1	10q-Del	0.996	1
CX3CL1	Del_2q37.1	0.996	1
ERBB3	RXRA	0.996	1
ERCC2	KDM6A	0.996	1
FGFR3	KDM6A	0.996	1
FGFR3	Del_9p23	0.996	1
GPC5	6q-Del	0.996	1
GPC5	Amp_19q13.43	0.996	1
GPC5	Del_6p25.3	0.996	1
GPC5	Del_18q23	0.996	1
NFE2L2	FAT1	0.996	1
RHOB	18q-Del	0.996	1
RHOB	Amp_1q23.3	0.996	1
TPTE	Del_22q13.32	0.996	1
TSC1	Amp_17q11.2	0.996	1
CEP192	19p-Del	0.996	1
RAD51C	Amp_6q21	0.996	1
RBM26	Del_7q36.3	0.996	1
19q-Amp	Del_1q32.1	0.996	1
1q-Amp	Del_Xp11.3	0.996	1
20q-Amp	Del_15q13.1	0.996	1
10q-Del	16p-Del	0.996	1
10q-Del	Del_11p15.5	0.996	1
10q-Del	Del_18q23	0.996	1
11p-Del	5q-Del	0.996	1
11p-Del	Del_13q14.2	0.996	1
14q-Del	18q-Del	0.996	1
14q-Del	Amp_1q23.3	0.996	1
15q-Del	18q-Del	0.996	1
16p-Del	Del_2q22.1	0.996	1
17p-Del	Del_19p13.3	0.996	1
18q-Del	Del_4q22.1	0.996	1
18q-Del	Del_4q34.2	0.996	1
18q-Del	Del_15q13.1	0.996	1
18q-Del	Del_19p13.3	0.996	1
19p-Del	9q-Del	0.996	1
19p-Del	Del_5q12.1	0.996	1
22q-Del	Del_8p23.1	0.996	1
4p-Del	Del_13q14.2	0.996	1
4p-Del	Del_16q23.1	0.996	1
4q-Del	8p-Del	0.996	1
5q-Del	6q-Del	0.996	1
5q-Del	8p-Del	0.996	1
5q-Del	Amp_2p25.1	0.996	1
5q-Del	Amp_5p15.33	0.996	1
6q-Del	8p-Del	0.996	1
9q-Del	Del_Xp11.3	0.996	1
Amp_1q21.3	Del_4q34.2	0.996	1
Amp_1q23.3	Amp_19q13.43	0.996	1
Amp_1q23.3	Del_6p25.3	0.996	1
Amp_1q23.3	Del_11p15.5	0.996	1
Amp_2p25.1	Amp_10p14	0.996	1
Amp_2p25.1	Amp_19q13.43	0.996	1
Amp_2p25.1	Del_12p13.1	0.996	1
Amp_2p25.1	Del_22q13.32	0.996	1
Amp_3p25.2	Amp_19q13.43	0.996	1
Amp_5p15.33	Amp_11q22.2	0.996	1
Amp_6p22.3	Amp_7p21.1	0.996	1
Amp_6p22.3	Del_8p23.1	0.996	1
Amp_7p21.1	Amp_8q22.3	0.996	1
Amp_9p24.1	Del_22q13.32	0.996	1
Amp_10p14	Amp_19q13.43	0.996	1
Amp_16p13.2	Del_8p23.1	0.996	1
Amp_16q22.1	Del_Xp11.3	0.996	1
Del_1p36.11	Del_9p21.3	0.996	1
Del_1q32.1	Del_17p12	0.996	1
Del_2q34	Del_16q23.1	0.996	1
Del_3p14.2	Del_10q23.31	0.996	1
Del_6p25.3	Del_12p13.1	0.996	1
Del_11p15.5	Del_15q13.1	0.996	1
Del_12p13.1	Del_17p12	0.996	1
Del_14q24.1	Del_16q23.1	0.996	1
ARID1A	GPC5	0.997	1
BTG2	Amp_1q21.3	0.997	1
CDKN2A	SPTAN1	0.997	1
CDKN2A	Amp_8q22.3	0.997	1
CDKN2A	Amp_10p14	0.997	1
EP300	CEP192	0.997	1
EP300	Del_4q22.1	0.997	1
ERCC2	Amp_1p34.2	0.997	1
FGFR3	Del_11p15.5	0.997	1
FOXA1	RHOB	0.997	1
FOXA1	9p-Del	0.997	1
FOXQ1	Del_7q36.3	0.997	1
HRAS	Del_12p13.1	0.997	1
KDM6A	RAD51C	0.997	1
RB1	Amp_11q22.2	0.997	1
SPTAN1	15q-Del	0.997	1
TP53	8p-Del	0.997	1
TPTE	Del_5q12.1	0.997	1
TPTE	Del_14q24.1	0.997	1
ACRC	Amp_3p25.2	0.997	1
CEP192	Del_18q23	0.997	1
17q-Amp	8q-Amp	0.997	1
17q-Amp	Del_16q23.1	0.997	1
19q-Amp	Amp_1q21.3	0.997	1
19q-Amp	Amp_19q13.43	0.997	1
19q-Amp	Del_11p15.5	0.997	1
20q-Amp	Del_17p12	0.997	1
3q-Amp	Del_11q23.3	0.997	1
3q-Amp	Del_11q25	0.997	1
7q-Amp	Amp_20q11.21	0.997	1
10q-Del	9q-Del	0.997	1
10q-Del	Del_5q12.1	0.997	1
10q-Del	Del_8p23.1	0.997	1
11p-Del	15q-Del	0.997	1
11q-Del	6q-Del	0.997	1
14q-Del	9p-Del	0.997	1
15q-Del	Del_1p36.11	0.997	1
15q-Del	Del_8p23.1	0.997	1
15q-Del	Del_16q23.1	0.997	1
16p-Del	Amp_16p11.2	0.997	1
16p-Del	Del_11q25	0.997	1
17p-Del	Del_Xp11.3	0.997	1
18q-Del	Del_5q12.1	0.997	1
19p-Del	Del_13q14.2	0.997	1
22q-Del	Del_3p14.2	0.997	1
22q-Del	Del_6q27	0.997	1
4p-Del	5q-Del	0.997	1
4p-Del	Amp_2p25.1	0.997	1
5q-Del	Amp_8p11.23	0.997	1
6q-Del	Amp_1q21.3	0.997	1
6q-Del	Del_14q24.1	0.997	1
8p-Del	Del_4q34.2	0.997	1
9q-Del	Amp_12p12.1	0.997	1
Amp_1q21.3	Amp_6q21	0.997	1
Amp_1q21.3	Amp_6q23.3	0.997	1
Amp_1q21.3	Amp_19q13.43	0.997	1
Amp_1q21.3	Del_Xq21.33	0.997	1
Amp_1q23.3	Amp_19q12	0.997	1
Amp_2p25.1	Amp_22q12.2	0.997	1
Amp_2p25.1	Del_14q24.1	0.997	1
Amp_3p25.2	Amp_3q26.33	0.997	1
Amp_3p25.2	Amp_7p21.1	0.997	1
Amp_4p16.3	Del_11q23.3	0.997	1
Amp_4q13.3	Del_12p13.1	0.997	1
Amp_5p15.33	Amp_9p24.1	0.997	1
Amp_8q22.3	Del_15q13.1	0.997	1
Amp_9p24.1	Amp_11p13	0.997	1
Amp_11q13.3	Amp_11q22.2	0.997	1
Amp_12q15	Del_11p15.5	0.997	1
Amp_17q12	Amp_19q13.43	0.997	1
Amp_17q12	Del_6p25.3	0.997	1
Amp_19q13.43	Amp_22q12.2	0.997	1
Amp_19q13.43	Del_10q23.31	0.997	1
Amp_19q13.43	Del_14q24.1	0.997	1
Del_2q22.1	Del_11q25	0.997	1
Del_2q34	Del_3p14.2	0.997	1
Del_2q34	Del_10q23.31	0.997	1
Del_2q37.1	Del_13q14.2	0.997	1
Del_6q27	Del_16p13.3	0.997	1
Del_6q27	Del_22q13.32	0.997	1
Del_8p23.1	Del_15q13.1	0.997	1
Del_8p23.1	Del_22q13.32	0.997	1
Del_9p23	Del_Xq21.33	0.997	1
Del_9p21.3	Del_11q25	0.997	1
ASXL2	MLL	0.998	1
BTG2	CDKN2A	0.998	1
BTG2	MIPOL1	0.998	1
CDKN2A	Amp_11q22.2	0.998	1
CX3CL1	Del_12p13.1	0.998	1
ELF3	Amp_6q23.3	0.998	1
ERCC2	HRAS	0.998	1
FGFR3	11q-Del	0.998	1
FGFR3	19p-Del	0.998	1
GPC5	3q-Amp	0.998	1
KDM6A	Amp_17q11.2	0.998	1
KDM6A	Del_3p14.2	0.998	1
RHOB	Del_18q23	0.998	1
RHOB	Del_22q13.32	0.998	1
RXRA	Del_14q24.1	0.998	1
SPTAN1	Del_15q13.1	0.998	1
TP53	Amp_6p22.3	0.998	1
TSC1	RAD51C	0.998	1
TSC1	Del_9p21.3	0.998	1
ACRC	Amp_22q12.2	0.998	1
RAD51C	Del_15q13.1	0.998	1
RBM26	Amp_1p34.2	0.998	1
1q-Amp	Amp_12p12.1	0.998	1
1q-Amp	Amp_16p13.2	0.998	1
20p-Amp	15q-Del	0.998	1
20q-Amp	17p-Del	0.998	1
5p-Amp	Amp_11q22.2	0.998	1
7q-Amp	Amp_10p14	0.998	1
10q-Del	17p-Del	0.998	1
14q-Del	Del_18q23	0.998	1
14q-Del	Del_22q13.32	0.998	1
15q-Del	6q-Del	0.998	1
16p-Del	22q-Del	0.998	1
16p-Del	Del_8p23.1	0.998	1
17p-Del	Amp_4p16.3	0.998	1
17p-Del	Del_2q22.1	0.998	1
18q-Del	4q-Del	0.998	1
19p-Del	Del_6q27	0.998	1
19p-Del	Del_10q23.31	0.998	1
22q-Del	Amp_10p14	0.998	1
22q-Del	Amp_16q22.1	0.998	1
22q-Del	Del_2q34	0.998	1
4p-Del	8p-Del	0.998	1
4q-Del	Del_18q23	0.998	1
5q-Del	Del_4q34.2	0.998	1
6q-Del	Del_2q34	0.998	1
6q-Del	Del_4q34.2	0.998	1
8p-Del	Del_10q23.31	0.998	1
9p-Del	Del_3p14.2	0.998	1
Amp_1q21.3	Amp_3q26.33	0.998	1
Amp_1q21.3	Del_10q23.31	0.998	1
Amp_1q23.3	Del_8p23.1	0.998	1
Amp_2p25.1	Amp_19q12	0.998	1
Amp_2p25.1	Del_11p15.5	0.998	1
Amp_3q26.33	Del_3p14.2	0.998	1
Amp_10p14	Amp_16p13.2	0.998	1
Amp_10p14	Amp_19q12	0.998	1
Amp_11q13.3	Del_16p13.3	0.998	1
Amp_11q13.3	Del_Xp11.3	0.998	1
Amp_12p12.1	Del_11p15.5	0.998	1
Amp_16p13.2	Amp_16p11.2	0.998	1
Amp_16q22.1	Del_12p13.1	0.998	1
Amp_17q12	Amp_22q12.2	0.998	1
Amp_17q23.3	Amp_22q12.2	0.998	1
Amp_19q12	Amp_19q13.43	0.998	1
Amp_19q12	Del_8p23.1	0.998	1
Amp_22q12.2	Del_14q24.1	0.998	1
Del_3p14.2	Del_5q12.1	0.998	1
Del_3p14.2	Del_11p15.5	0.998	1
Del_3p14.2	Del_13q14.2	0.998	1
Del_3p14.2	Del_19p13.3	0.998	1
Del_5q12.1	Del_9p23	0.998	1
Del_5q12.1	Del_16q23.1	0.998	1
Del_6q27	Del_11p15.5	0.998	1
Del_6q27	Del_11q25	0.998	1
Del_9p23	Del_11q23.3	0.998	1
Del_10q23.31	Del_19p13.3	0.998	1
ASXL2	Del_12p13.1	0.999	1
ASXL2	Del_17p12	0.999	1
ASXL2	Del_18q23	0.999	1
BTG2	Amp_10p14	0.999	1
CDKN2A	Amp_16q22.1	0.999	1
CX3CL1	MIPOL1	0.999	1
ELF3	MIPOL1	0.999	1
ELF3	Amp_17q23.3	0.999	1
FGFR3	17p-Del	0.999	1
FGFR3	9p-Del	0.999	1
FGFR3	Del_9p21.3	0.999	1
FOXQ1	MLL2	0.999	1
GPC5	PHLDA3	0.999	1
NFE2L2	Del_4q22.1	0.999	1
PHLDA3	RBM26	0.999	1
RXRA	14q-Del	0.999	1
RXRA	Del_8p23.1	0.999	1
TPTE	22q-Del	0.999	1
TXNIP	11q-Del	0.999	1
CEP192	14q-Del	0.999	1
CEP192	Del_19p13.3	0.999	1
ECM1	5p-Amp	0.999	1
17q-Amp	16p-Del	0.999	1
19q-Amp	Amp_10p14	0.999	1
3p-Amp	Amp_3p25.2	0.999	1
3p-Amp	Amp_3q26.33	0.999	1
3p-Amp	Del_2q22.1	0.999	1
3q-Amp	Del_2q22.1	0.999	1
8q-Amp	Amp_19q13.43	0.999	1
10q-Del	Del_1p36.11	0.999	1
10q-Del	Del_3p14.2	0.999	1
11p-Del	Del_2q37.1	0.999	1
11p-Del	Del_4q34.2	0.999	1
11p-Del	Del_Xq21.33	0.999	1
11q-Del	Amp_4p16.3	0.999	1
11q-Del	Del_9p21.3	0.999	1
14q-Del	Amp_4p16.3	0.999	1
14q-Del	Del_5q12.1	0.999	1
15q-Del	16p-Del	0.999	1
15q-Del	17p-Del	0.999	1
15q-Del	Del_3p14.2	0.999	1
15q-Del	Del_5q12.1	0.999	1
15q-Del	Del_14q24.1	0.999	1
15q-Del	Del_17p12	0.999	1
16p-Del	Amp_1q21.3	0.999	1
16p-Del	Del_6q27	0.999	1
16p-Del	Del_10q23.31	0.999	1
16p-Del	Del_16p13.3	0.999	1
17p-Del	Del_4q34.2	0.999	1
17p-Del	Del_9p23	0.999	1
17p-Del	Del_11q25	0.999	1
18q-Del	22q-Del	0.999	1
18q-Del	4p-Del	0.999	1
18q-Del	5q-Del	0.999	1
18q-Del	Del_2q37.1	0.999	1
18q-Del	Del_22q13.32	0.999	1
19p-Del	5q-Del	0.999	1
22q-Del	Del_5q12.1	0.999	1
4p-Del	Del_5q12.1	0.999	1
4p-Del	Del_8p23.1	0.999	1
4p-Del	Del_18q23	0.999	1
5q-Del	Del_16q23.1	0.999	1
6q-Del	Del_11q23.3	0.999	1
6q-Del	Del_13q14.2	0.999	1
6q-Del	Del_16q23.1	0.999	1
8p-Del	Amp_9p24.1	0.999	1
8p-Del	Del_5q12.1	0.999	1
8p-Del	Del_16p13.3	0.999	1
9p-Del	Del_1q32.1	0.999	1
9p-Del	Del_5q12.1	0.999	1
9q-Del	Del_1q32.1	0.999	1
9q-Del	Del_11q25	0.999	1
Amp_1q21.3	Amp_16q22.1	0.999	1
Amp_1q21.3	Amp_19q12	0.999	1
Amp_1q21.3	Del_8p23.1	0.999	1
Amp_1q21.3	Del_14q24.1	0.999	1
Amp_1q21.3	Del_16q23.1	0.999	1
Amp_2p25.1	Amp_6p22.3	0.999	1
Amp_3q26.33	Amp_10p14	0.999	1
Amp_3q26.33	Del_17p12	0.999	1
Amp_4p16.3	Del_9p23	0.999	1
Amp_5p15.33	Del_16q23.1	0.999	1
Amp_6p22.3	Amp_7p11.2	0.999	1
Amp_6p22.3	Amp_9p24.1	0.999	1
Amp_6q21	Amp_11p13	0.999	1
Amp_6q23.3	Del_7q36.3	0.999	1
Amp_7p21.1	Amp_22q12.2	0.999	1
Amp_8q22.3	Amp_11q22.2	0.999	1
Amp_11q13.3	Amp_16q22.1	0.999	1
Amp_12p12.1	Amp_12q15	0.999	1
Amp_12p12.1	Del_9q33.2	0.999	1
Amp_16p13.2	Del_16q23.1	0.999	1
Amp_16p11.2	Del_8p23.1	0.999	1
Amp_16p11.2	Del_16q23.1	0.999	1
Amp_17q11.2	Del_16p13.3	0.999	1
Amp_19q13.43	Del_17p12	0.999	1
Amp_20q11.21	Del_17p12	0.999	1
Amp_20q11.21	Del_Xq21.33	0.999	1
Del_2q22.1	Del_2q34	0.999	1
Del_2q34	Del_13q14.2	0.999	1
Del_2q37.1	Del_6q27	0.999	1
Del_2q37.1	Del_16q23.1	0.999	1
Del_2q37.1	Del_17p12	0.999	1
Del_3p14.2	Del_15q13.1	0.999	1
Del_4q34.2	Del_9q33.2	0.999	1
Del_4q34.2	Del_14q24.1	0.999	1
Del_5q12.1	Del_19p13.3	0.999	1
Del_5q12.1	Del_22q13.32	0.999	1
Del_6q27	Del_15q13.1	0.999	1
Del_8p23.1	Del_14q24.1	0.999	1
Del_9p21.3	Del_11q23.3	0.999	1
Del_9q33.2	Del_Xq21.33	0.999	1
Del_10q23.31	Del_17p12	0.999	1
Del_10q23.31	Del_18q23	0.999	1
Del_11q23.3	Del_Xq21.33	0.999	1
Del_11q25	Del_Xq21.33	0.999	1
Del_13q14.2	Del_16q23.1	0.999	1
Del_14q24.1	Del_15q13.1	0.999	1
Del_15q13.1	Del_16p13.3	0.999	1
CX3CL1	Del_6p25.3	1	1
EP300	16p-Del	1	1
ERCC2	RAD51C	1	1
FGFR3	STAG2	1	1
FGFR3	11p-Del	1	1
FGFR3	9q-Del	1	1
FGFR3	Del_9q33.2	1	1
FOXA1	19p-Del	1	1
KDM6A	Del_11q23.3	1	1
KLF5	MLL2	1	1
KLF5	MLL	1	1
MLL2	NFE2L2	1	1
MLL2	Del_7q36.3	1	1
NFE2L2	19p-Del	1	1
NFE2L2	Del_9p21.3	1	1
RB1	RHOB	1	1
RB1	TP53	1	1
RHOB	TP53	1	1
RXRA	8p-Del	1	1
TP53	Amp_11p13	1	1
TP53	Amp_16q22.1	1	1
TP53	Del_19p13.3	1	1
TPTE	5q-Del	1	1
TSC1	CEP192	1	1
TSC1	Del_Xp11.3	1	1
CEP192	5q-Del	1	1
CEP192	Del_6p25.3	1	1
17q-Amp	Amp_17q11.2	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q23.3	1	1
17q-Amp	Amp_19q13.43	1	1
17q-Amp	Amp_22q12.2	1	1
19q-Amp	Amp_19q12	1	1
1q-Amp	Amp_1q21.3	1	1
1q-Amp	Amp_1q23.3	1	1
1q-Amp	Amp_16q22.1	1	1
1q-Amp	Del_16p13.3	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	10q-Del	1	1
20p-Amp	Amp_20q11.21	1	1
20p-Amp	Del_10q23.31	1	1
20q-Amp	10q-Del	1	1
20q-Amp	15q-Del	1	1
20q-Amp	Amp_20q11.21	1	1
20q-Amp	Del_10q23.31	1	1
3p-Amp	3q-Amp	1	1
3q-Amp	Amp_3q26.33	1	1
5p-Amp	Amp_5p15.33	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_7p21.1	1	1
7p-Amp	Amp_7p11.2	1	1
7q-Amp	Amp_7p21.1	1	1
7q-Amp	Amp_7p11.2	1	1
8q-Amp	Amp_8q22.3	1	1
10q-Del	11p-Del	1	1
10q-Del	15q-Del	1	1
10q-Del	18q-Del	1	1
10q-Del	22q-Del	1	1
10q-Del	6q-Del	1	1
10q-Del	Del_6q27	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_13q14.2	1	1
10q-Del	Del_15q13.1	1	1
10q-Del	Del_16q23.1	1	1
11p-Del	11q-Del	1	1
11p-Del	17p-Del	1	1
11p-Del	18q-Del	1	1
11p-Del	6q-Del	1	1
11p-Del	9p-Del	1	1
11p-Del	9q-Del	1	1
11p-Del	Del_3p14.2	1	1
11p-Del	Del_5q12.1	1	1
11p-Del	Del_6q27	1	1
11p-Del	Del_9p23	1	1
11p-Del	Del_9p21.3	1	1
11p-Del	Del_9q33.2	1	1
11p-Del	Del_10q23.31	1	1
11p-Del	Del_11p15.5	1	1
11p-Del	Del_11q23.3	1	1
11p-Del	Del_11q25	1	1
11p-Del	Del_17p12	1	1
11p-Del	Del_18q23	1	1
11q-Del	17p-Del	1	1
11q-Del	9p-Del	1	1
11q-Del	9q-Del	1	1
11q-Del	Amp_11q13.3	1	1
11q-Del	Del_3p14.2	1	1
11q-Del	Del_9p23	1	1
11q-Del	Del_9q33.2	1	1
11q-Del	Del_11p15.5	1	1
11q-Del	Del_11q23.3	1	1
11q-Del	Del_11q25	1	1
11q-Del	Del_17p12	1	1
11q-Del	Del_Xq21.33	1	1
14q-Del	22q-Del	1	1
14q-Del	5q-Del	1	1
14q-Del	Del_1q32.1	1	1
14q-Del	Del_4q34.2	1	1
14q-Del	Del_14q24.1	1	1
14q-Del	Del_17p12	1	1
15q-Del	22q-Del	1	1
15q-Del	5q-Del	1	1
15q-Del	Del_10q23.31	1	1
15q-Del	Del_11p15.5	1	1
15q-Del	Del_15q13.1	1	1
15q-Del	Del_16p13.3	1	1
15q-Del	Del_22q13.32	1	1
16p-Del	6q-Del	1	1
16p-Del	Amp_20q11.21	1	1
16p-Del	Del_16q23.1	1	1
16p-Del	Del_Xq21.33	1	1
17p-Del	9p-Del	1	1
17p-Del	9q-Del	1	1
17p-Del	Del_3p14.2	1	1
17p-Del	Del_9p21.3	1	1
17p-Del	Del_9q33.2	1	1
17p-Del	Del_11p15.5	1	1
17p-Del	Del_11q23.3	1	1
17p-Del	Del_17p12	1	1
18q-Del	Del_10q23.31	1	1
18q-Del	Del_11p15.5	1	1
18q-Del	Del_18q23	1	1
19p-Del	Del_19p13.3	1	1
22q-Del	5q-Del	1	1
22q-Del	Amp_16p11.2	1	1
22q-Del	Del_2q37.1	1	1
22q-Del	Del_10q23.31	1	1
22q-Del	Del_14q24.1	1	1
22q-Del	Del_15q13.1	1	1
22q-Del	Del_16p13.3	1	1
22q-Del	Del_22q13.32	1	1
4p-Del	4q-Del	1	1
4p-Del	Del_4q22.1	1	1
4p-Del	Del_4q34.2	1	1
4q-Del	Del_4q22.1	1	1
4q-Del	Del_4q34.2	1	1
5q-Del	Del_3p14.2	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_6q27	1	1
5q-Del	Del_8p23.1	1	1
5q-Del	Del_10q23.31	1	1
5q-Del	Del_11p15.5	1	1
5q-Del	Del_14q24.1	1	1
5q-Del	Del_15q13.1	1	1
5q-Del	Del_18q23	1	1
5q-Del	Del_19p13.3	1	1
5q-Del	Del_22q13.32	1	1
6q-Del	Amp_19q13.43	1	1
6q-Del	Del_3p14.2	1	1
6q-Del	Del_6p25.3	1	1
6q-Del	Del_6q27	1	1
6q-Del	Del_10q23.31	1	1
6q-Del	Del_11q25	1	1
6q-Del	Del_15q13.1	1	1
6q-Del	Del_16p13.3	1	1
6q-Del	Del_17p12	1	1
6q-Del	Del_19p13.3	1	1
8p-Del	Amp_16p11.2	1	1
8p-Del	Del_7q36.3	1	1
8p-Del	Del_8p23.1	1	1
8p-Del	Del_16q23.1	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_4p16.3	1	1
9p-Del	Del_4q34.2	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_9q33.2	1	1
9p-Del	Del_11p15.5	1	1
9p-Del	Del_11q23.3	1	1
9p-Del	Del_11q25	1	1
9p-Del	Del_17p12	1	1
9q-Del	Amp_4p16.3	1	1
9q-Del	Del_4q34.2	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_9q33.2	1	1
9q-Del	Del_11p15.5	1	1
9q-Del	Del_11q23.3	1	1
9q-Del	Del_17p12	1	1
Amp_1p34.2	Amp_4q13.3	1	1
Amp_1p34.2	Amp_6q21	1	1
Amp_1q21.3	Amp_1q23.3	1	1
Amp_1q21.3	Amp_3p25.2	1	1
Amp_1q21.3	Amp_10p14	1	1
Amp_1q21.3	Del_6q27	1	1
Amp_1q21.3	Del_16p13.3	1	1
Amp_1q21.3	Del_17p12	1	1
Amp_1q23.3	Amp_3p25.2	1	1
Amp_1q23.3	Amp_8q22.3	1	1
Amp_1q23.3	Del_14q24.1	1	1
Amp_1q23.3	Del_17p12	1	1
Amp_2p25.1	Amp_3p25.2	1	1
Amp_2p25.1	Amp_8q22.3	1	1
Amp_3p25.2	Amp_6q23.3	1	1
Amp_3p25.2	Amp_8q22.3	1	1
Amp_3p25.2	Amp_22q12.2	1	1
Amp_4p16.3	Del_1q32.1	1	1
Amp_4p16.3	Del_9q33.2	1	1
Amp_4p16.3	Del_11p15.5	1	1
Amp_4p16.3	Del_Xp11.3	1	1
Amp_5p15.33	Del_8p23.1	1	1
Amp_6p22.3	Amp_8q22.3	1	1
Amp_6p22.3	Amp_11p13	1	1
Amp_6p22.3	Amp_19q12	1	1
Amp_7p21.1	Amp_7p11.2	1	1
Amp_7p21.1	Amp_11p13	1	1
Amp_7p21.1	Del_7q36.3	1	1
Amp_8p11.23	Del_8p23.1	1	1
Amp_8q22.3	Amp_10p14	1	1
Amp_8q22.3	Amp_19q13.43	1	1
Amp_8q22.3	Del_7q36.3	1	1
Amp_9p24.1	Del_16q23.1	1	1
Amp_10p14	Del_2q37.1	1	1
Amp_10p14	Del_7q36.3	1	1
Amp_11q13.3	Del_11q23.3	1	1
Amp_11q13.3	Del_11q25	1	1
Amp_12p12.1	Del_Xp11.3	1	1
Amp_12q15	Del_Xq21.33	1	1
Amp_16p13.2	Del_16p13.3	1	1
Amp_16p11.2	Del_16p13.3	1	1
Amp_17q11.2	Amp_17q12	1	1
Amp_17q11.2	Amp_17q23.3	1	1
Amp_17q11.2	Amp_19q13.43	1	1
Amp_17q11.2	Del_17p12	1	1
Amp_17q12	Amp_17q23.3	1	1
Amp_19q13.43	Del_6p25.3	1	1
Amp_19q13.43	Del_6q27	1	1
Amp_19q13.43	Del_16p13.3	1	1
Amp_19q13.43	Del_16q23.1	1	1
Amp_20q11.21	Del_10q23.31	1	1
Del_1p36.11	Del_Xq21.33	1	1
Del_1q32.1	Del_3p14.2	1	1
Del_1q32.1	Del_9p23	1	1
Del_1q32.1	Del_9p21.3	1	1
Del_1q32.1	Del_14q24.1	1	1
Del_2q34	Del_2q37.1	1	1
Del_2q34	Del_6q27	1	1
Del_2q37.1	Del_10q23.31	1	1
Del_2q37.1	Del_11p15.5	1	1
Del_2q37.1	Del_22q13.32	1	1
Del_3p14.2	Del_4q34.2	1	1
Del_3p14.2	Del_6q27	1	1
Del_3p14.2	Del_9p23	1	1
Del_3p14.2	Del_11q23.3	1	1
Del_3p14.2	Del_11q25	1	1
Del_3p14.2	Del_17p12	1	1
Del_4q22.1	Del_4q34.2	1	1
Del_4q34.2	Del_6q27	1	1
Del_4q34.2	Del_11p15.5	1	1
Del_4q34.2	Del_17p12	1	1
Del_5q12.1	Del_8p23.1	1	1
Del_5q12.1	Del_10q23.31	1	1
Del_5q12.1	Del_11p15.5	1	1
Del_5q12.1	Del_14q24.1	1	1
Del_6p25.3	Del_6q27	1	1
Del_6p25.3	Del_18q23	1	1
Del_6q27	Del_10q23.31	1	1
Del_6q27	Del_13q14.2	1	1
Del_6q27	Del_14q24.1	1	1
Del_6q27	Del_16q23.1	1	1
Del_6q27	Del_17p12	1	1
Del_6q27	Del_19p13.3	1	1
Del_7q36.3	Del_8p23.1	1	1
Del_8p23.1	Del_10q23.31	1	1
Del_8p23.1	Del_16p13.3	1	1
Del_8p23.1	Del_16q23.1	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_9q33.2	1	1
Del_9p23	Del_11p15.5	1	1
Del_9p21.3	Del_9q33.2	1	1
Del_9p21.3	Del_11p15.5	1	1
Del_9p21.3	Del_Xp11.3	1	1
Del_9p21.3	Del_Xq21.33	1	1
Del_9q33.2	Del_11p15.5	1	1
Del_9q33.2	Del_11q23.3	1	1
Del_9q33.2	Del_11q25	1	1
Del_9q33.2	Del_17p12	1	1
Del_10q23.31	Del_11p15.5	1	1
Del_10q23.31	Del_13q14.2	1	1
Del_10q23.31	Del_14q24.1	1	1
Del_10q23.31	Del_15q13.1	1	1
Del_10q23.31	Del_16p13.3	1	1
Del_10q23.31	Del_16q23.1	1	1
Del_10q23.31	Del_22q13.32	1	1
Del_11p15.5	Del_11q23.3	1	1
Del_11p15.5	Del_11q25	1	1
Del_11p15.5	Del_17p12	1	1
Del_11p15.5	Del_18q23	1	1
Del_11p15.5	Del_Xq21.33	1	1
Del_11q23.3	Del_11q25	1	1
Del_11q23.3	Del_17p12	1	1
Del_11q25	Del_17p12	1	1
Del_14q24.1	Del_17p12	1	1
Del_14q24.1	Del_22q13.32	1	1
Del_15q13.1	Del_16q23.1	1	1
Del_15q13.1	Del_22q13.32	1	1
Del_16p13.3	Del_16q23.1	1	1
Del_16p13.3	Del_17p12	1	1
Del_19p13.3	Del_22q13.32	1	1
TP53	Amp_12q15	5.98e-06	1
RB1	Del_9p21.3	6.32e-06	1
