[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
AGE_mutation.rate                      "AGE_mutation rate"                     
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
KARNOFSKY.PERFORMANCE.SCORE            "KARNOFSKY PERFORMANCE SCORE"           
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
NUMBERPACKYEARSSMOKED                  "NUMBERPACKYEARSSMOKED"                 
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
RACE                                   "RACE"                                  
                                       Statistical test            
Time to Death                          "Cox regression test"       
AGE                                    "Spearman correlation test" 
AGE_mutation.rate                      "Linear Regression Analysis"
NEOPLASM.DISEASESTAGE                  "Kruskal-Wallis test"       
PATHOLOGY.T.STAGE                      "Spearman correlation test" 
PATHOLOGY.N.STAGE                      "Spearman correlation test" 
PATHOLOGY.M.STAGE                      "Kruskal-Wallis test"       
GENDER                                 "Wilcoxon test"             
KARNOFSKY.PERFORMANCE.SCORE            "Spearman correlation test" 
HISTOLOGICAL.TYPE                      "Kruskal-Wallis test"       
RADIATIONS.RADIATION.REGIMENINDICATION "Wilcoxon test"             
NUMBERPACKYEARSSMOKED                  "Spearman correlation test" 
COMPLETENESS.OF.RESECTION              "Kruskal-Wallis test"       
RACE                                   "Kruskal-Wallis test"       
                                       Significant variables
Time to Death                          "N=0"                
AGE                                    "N=0"                
AGE_mutation.rate                      "N=0"                
NEOPLASM.DISEASESTAGE                  "N=0"                
PATHOLOGY.T.STAGE                      "N=0"                
PATHOLOGY.N.STAGE                      "N=0"                
PATHOLOGY.M.STAGE                      "N=0"                
GENDER                                 "N=0"                
KARNOFSKY.PERFORMANCE.SCORE            "N=0"                
HISTOLOGICAL.TYPE                      "N=0"                
RADIATIONS.RADIATION.REGIMENINDICATION "N=0"                
NUMBERPACKYEARSSMOKED                  "N=2"                
COMPLETENESS.OF.RESECTION              "N=0"                
RACE                                   "N=0"                
                                       Associated with               
Time to Death                          " "                           
AGE                                    " "                           
AGE_mutation.rate                      " "                           
NEOPLASM.DISEASESTAGE                  " "                           
PATHOLOGY.T.STAGE                      " "                           
PATHOLOGY.N.STAGE                      " "                           
PATHOLOGY.M.STAGE                      " "                           
GENDER                                 " "                           
KARNOFSKY.PERFORMANCE.SCORE            " "                           
HISTOLOGICAL.TYPE                      " "                           
RADIATIONS.RADIATION.REGIMENINDICATION " "                           
NUMBERPACKYEARSSMOKED                  "higher numberpackyearssmoked"
COMPLETENESS.OF.RESECTION              " "                           
RACE                                   " "                           
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    " "                                                                                       
AGE_mutation.rate                      " "                                                                                       
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      " "                                                                                       
PATHOLOGY.N.STAGE                      " "                                                                                       
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 " "                                                                                       
KARNOFSKY.PERFORMANCE.SCORE            " "                                                                                       
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION " "                                                                                       
NUMBERPACKYEARSSMOKED                  "N=2"                                                                                     
COMPLETENESS.OF.RESECTION              " "                                                                                       
RACE                                   " "                                                                                       
                                       Associated with                    
Time to Death                          " "                           " "  
AGE                                    " "                           " "  
AGE_mutation.rate                      " "                           " "  
NEOPLASM.DISEASESTAGE                  " "                           " "  
PATHOLOGY.T.STAGE                      " "                           " "  
PATHOLOGY.N.STAGE                      " "                           " "  
PATHOLOGY.M.STAGE                      " "                           " "  
GENDER                                 " "                           " "  
KARNOFSKY.PERFORMANCE.SCORE            " "                           " "  
HISTOLOGICAL.TYPE                      " "                           " "  
RADIATIONS.RADIATION.REGIMENINDICATION " "                           " "  
NUMBERPACKYEARSSMOKED                  "lower numberpackyearssmoked" "N=0"
COMPLETENESS.OF.RESECTION              " "                           " "  
RACE                                   " "                           " "  
