gene1	gene2	pval	qval
FGFR3	Amp_10p14	0.000166	1
TP53	9p-Del	0.000523	1
9q-Del	Amp_6p22.3	0.000529	1
FGFR3	RB1	0.000756	1
Amp_3p25.2	Del_9p21.3	0.00089	1
ATM	20p-Amp	0.00154	1
Del_9p21.3	Del_13q14.2	0.00159	1
FGFR3	Amp_8q22.3	0.00173	1
5p-Amp	Del_9p21.3	0.00221	1
PIK3CA	Amp_7p21.1	0.0026	1
NFE2L2	Amp_6p22.3	0.00319	1
Amp_5p15.33	Del_9p21.3	0.00331	1
FGFR3	8q-Amp	0.00346	1
TSC1	Amp_6p22.3	0.0035	1
Amp_10p14	Del_9p21.3	0.00366	1
ARID1A	EPHA2	0.00389	1
ATM	20q-Amp	0.00415	1
ARID1A	FGFR3	0.00456	1
RB1	Del_3p14.2	0.00486	1
ZNF180	Del_8p21.3	0.00515	1
FGFR3	Amp_3p25.2	0.00554	1
STAG2	Amp_10p14	0.00568	1
ZNF180	Del_8p23.3	0.00608	1
FGFR3	Amp_16p13.2	0.00682	1
STAG2	Amp_7p11.2	0.00688	1
FBXW7	Amp_5p15.33	0.00725	1
CASP8	Del_8p21.3	0.00738	1
CDKN1A	Amp_8p11.21	0.00741	1
NFE2L2	RB1	0.00759	1
FGFR3	Del_22q13.32	0.00931	1
PARD3	9p-Del	0.00936	1
ARID1B	9p-Del	0.00936	1
CASP8	Amp_1q23.3	0.00953	1
FGFR3	Amp_1p34.2	0.00954	1
Amp_7p21.1	Del_9p21.3	0.0097	1
ERCC2	Del_9p21.3	0.0108	1
FGFR3	Amp_6p22.3	0.0109	1
TP53	Del_9p23	0.0122	1
KDM6A	Amp_10p14	0.0124	1
KDM6A	WAC	0.0129	1
RHOA	Amp_1q21.3	0.0132	1
KLF5	9q-Del	0.0135	1
PARD3	Del_5q12.1	0.0135	1
ARID1B	9q-Del	0.0135	1
ELF3	Amp_19q12	0.0138	1
FBXW7	Amp_19q12	0.0146	1
ATAD5	Del_9p23	0.0153	1
FAT1	Amp_5p15.33	0.0154	1
ATAD5	Del_9p21.3	0.0156	1
RHOB	Del_16p13.3	0.0157	1
FAT1	Amp_12q15	0.016	1
FAT1	Amp_13q22.1	0.016	1
Amp_4q13.3	Del_9p21.3	0.0169	1
RB1	Del_11p15.5	0.0172	1
THRAP3	Amp_5p15.33	0.0173	1
CDKN1A	TP53	0.0175	1
FBXW7	Amp_17q23.3	0.0177	1
CDKN1A	8q-Amp	0.0179	1
ATM	Del_2q34	0.0181	1
RB1	Amp_11q13.3	0.0184	1
SF3B3	8p-Del	0.0186	1
EP300	SPTAN1	0.0187	1
11p-Del	Amp_7p11.2	0.0187	1
ARID1B	Del_9p23	0.0194	1
CSMD3	22q-Del	0.0203	1
ZFP36L1	9p-Del	0.0208	1
EP300	11p-Del	0.021	1
9p-Del	Amp_6p22.3	0.0218	1
SF3B1	STAG2	0.0219	1
KDM6A	FAT1	0.022	1
HRAS	Del_11p15.5	0.0235	1
CSMD3	Del_2q37.1	0.024	1
PIK3CA	Amp_11q13.3	0.024	1
TSC1	Amp_8q22.3	0.0257	1
DENND5B	Del_13q14.2	0.0257	1
FGFR3	PARD3	0.0258	1
FGFR3	ARID1B	0.0258	1
FBXW7	5p-Amp	0.0259	1
GPR50	Del_9p21.3	0.0262	1
9p-Del	Amp_7p11.2	0.0264	1
ELF3	Amp_10p14	0.0265	1
SHANK1	9p-Del	0.0266	1
CREBBP	Amp_11q13.3	0.0267	1
ZNF180	Amp_8q22.3	0.0268	1
OGDH	8p-Del	0.0275	1
KRAS	TP53	0.0277	1
PIK3CA	EXOSC10	0.0292	1
OGDH	Del_5q12.1	0.0292	1
KDM6A	Amp_5p15.33	0.0294	1
SF3B3	Del_8p21.3	0.0296	1
ATM	Amp_10p14	0.0297	1
ATM	Del_6q27	0.0298	1
STAG2	Amp_6p22.3	0.0298	1
ZFP36L1	9q-Del	0.0306	1
ATM	Del_17p12	0.031	1
PARD3	Del_9p21.3	0.0314	1
FGFR3	Amp_7p11.2	0.0316	1
SPTAN1	Del_16p13.3	0.0316	1
KLF5	Del_4q34.2	0.0319	1
TP53	ZBTB7B	0.0321	1
NFE2L2	Amp_3p25.2	0.0322	1
TSC1	Del_4q22.1	0.0327	1
KDM6A	NF2	0.0332	1
ATM	Amp_17q23.3	0.0337	1
ATM	FGFR3	0.0343	1
TSC1	Del_2q37.1	0.0344	1
TSC1	Del_16p13.3	0.0344	1
17p-Del	Amp_6p22.3	0.0344	1
ASXL1	Amp_3q26.33	0.0348	1
SF3B3	Del_8p23.3	0.035	1
KDM6A	RB1	0.0355	1
SF3B3	Del_16p13.3	0.0358	1
CNOT1	Del_16p13.3	0.0358	1
STAG2	Amp_12q15	0.036	1
FAT1	Amp_19q12	0.0368	1
CDH1	Amp_6p22.3	0.0368	1
NCOA1	17p-Del	0.037	1
CSMD3	Del_22q13.32	0.0371	1
TP53	DNAH6	0.0371	1
ARID1A	NFE2L2	0.0377	1
NFE2L2	Amp_5p15.33	0.0377	1
KRAS	Amp_20q11.21	0.0385	1
CSMD3	Del_2q34	0.039	1
KLF5	Amp_3p25.2	0.0391	1
NFE2L2	Amp_19q12	0.0393	1
7p-Amp	Del_11q23.3	0.0393	1
EP300	Del_9p21.3	0.0394	1
SHANK1	5p-Amp	0.0395	1
CTCF	Del_9p21.3	0.04	1
Amp_16p13.2	Del_9p21.3	0.04	1
RB1	SSH3	0.0401	1
Amp_6p22.3	Amp_11q13.3	0.0402	1
Amp_7p11.2	Del_9p23	0.0404	1
TSC1	Del_10q23.31	0.0408	1
ERBB2	8q-Amp	0.0412	1
ZFP36L1	17p-Del	0.0414	1
CDKN1A	Amp_8q22.3	0.0419	1
Amp_11q22.2	Del_6q27	0.0422	1
18q-Del	Amp_1p34.2	0.0424	1
ACTB	9q-Del	0.0427	1
SLC9A4	9q-Del	0.0427	1
TXNIP	Del_9p21.3	0.0433	1
IDH1	Del_8p21.3	0.0437	1
FUS	Del_8p21.3	0.0437	1
CDKN2A	Amp_12q15	0.0438	1
CDKN2A	Amp_13q22.1	0.0438	1
9q-Del	Amp_8q22.3	0.0438	1
CSMD3	Del_11q23.3	0.044	1
3q-Amp	5q-Del	0.044	1
SHANK1	17p-Del	0.0442	1
KDM6A	10q-Del	0.0443	1
HFM1	Del_9p21.3	0.0444	1
HRAS	Del_13q14.2	0.045	1
ACTB	Del_13q14.2	0.045	1
ARID1A	Amp_19q13.43	0.0452	1
ATAD5	Amp_8p11.23	0.0455	1
CREBBP	Del_9p21.3	0.0465	1
ITGA4	Amp_10p14	0.0467	1
NF2	Del_17p12	0.0468	1
HRAS	5p-Amp	0.0475	1
ATM	Amp_12q15	0.0482	1
IDH1	Del_8p23.3	0.0482	1
FUS	Del_8p23.3	0.0482	1
TRERF1	Amp_20q11.21	0.0485	1
CDKN1A	ATAD5	0.0487	1
FBXW7	Del_19p13.3	0.0487	1
PIK3CA	17q-Amp	0.0488	1
HRAS	Amp_5p15.33	0.0489	1
TAF11	Amp_8q22.3	0.049	1
RB1	11p-Del	0.0492	1
CSMD3	Del_2q22.1	0.0495	1
FGFR3	KDM5A	0.0496	1
NCOA1	Del_16p13.3	0.0496	1
CREBBP	9p-Del	0.0497	1
ATM	6q-Del	0.0505	1
CREBBP	Amp_20q11.21	0.0509	1
ATM	Amp_20q11.21	0.0512	1
Del_9p23	Del_13q14.2	0.0512	1
CSMD3	Del_8p21.3	0.0513	1
SPTAN1	5p-Amp	0.0513	1
KLF5	Del_3p14.2	0.0518	1
ZNF750	Del_8p21.3	0.0518	1
ARID1B	Del_3p14.2	0.0518	1
SF3B3	Del_11q23.3	0.0525	1
TRERF1	20q-Amp	0.0525	1
HRAS	11p-Del	0.0528	1
ACTB	17p-Del	0.0528	1
TSC1	10q-Del	0.053	1
POTEG	Del_9p21.3	0.0532	1
ELF3	Amp_6p22.3	0.0541	1
KDM6A	Amp_16p13.2	0.0543	1
FAT1	Del_8p23.3	0.0549	1
RB1	8q-Amp	0.0556	1
ACTB	Del_18q23	0.0556	1
DIAPH2	Amp_8p11.21	0.0559	1
NFE2L2	Del_6p25.3	0.0562	1
SF3B1	Amp_13q22.1	0.0562	1
ZFP36L2	Del_17p12	0.0563	1
CREBBP	Del_11q25	0.0565	1
TBC1D12	Amp_7p21.1	0.0565	1
ELF3	RB1	0.0568	1
RPTN	Amp_10p14	0.0568	1
ERBB2	Amp_10p14	0.0575	1
PPP4R1	Del_11p15.5	0.0578	1
TP53	19q-Amp	0.058	1
FGFR3	METTL3	0.0583	1
TSC1	ATAD5	0.0583	1
CTNNB1	Del_8p23.3	0.0585	1
NF2	Del_9p23	0.0585	1
CASP8	Del_8p23.3	0.0585	1
ZNF750	Del_8p23.3	0.0585	1
Amp_5p15.33	Del_12p13.1	0.0586	1
DENND5B	Amp_20q11.21	0.0591	1
RBM26	Amp_20q11.21	0.0591	1
ATAD5	9p-Del	0.0593	1
ARID1B	SPTAN1	0.0594	1
ZNF180	8p-Del	0.0595	1
DDX3X	8p-Del	0.0595	1
CDKN1A	ZFP36L1	0.0596	1
MYO16	Del_9p21.3	0.0596	1
11q-Del	Amp_1p34.2	0.0596	1
16p-Del	Del_9p21.3	0.0596	1
PIK3CA	Amp_16p13.2	0.0601	1
CASP8	9p-Del	0.0605	1
MYO16	Amp_10p14	0.0605	1
EPS8	9p-Del	0.0605	1
TGIF2LX	Del_8p21.3	0.0621	1
PHLDA3	Del_8p21.3	0.0621	1
IDH1	KDM6A	0.0622	1
RARG	9q-Del	0.0624	1
ZNF180	Del_9p21.3	0.0631	1
RHOA	Del_9p21.3	0.0632	1
GPR50	Amp_1q23.3	0.0634	1
SF3B3	Del_11q25	0.0634	1
CDH1	Amp_1q23.3	0.0634	1
MYO16	Del_9p23	0.0636	1
ZNF185	Del_9p21.3	0.0639	1
Del_9p21.3	Del_16q23.1	0.0645	1
CSMD3	HRAS	0.0651	1
ARID1A	20p-Amp	0.0654	1
11p-Del	Amp_5p15.33	0.0654	1
FAT1	5p-Amp	0.0655	1
CREBBP	Amp_3p25.2	0.0661	1
DNAH6	8q-Amp	0.0662	1
CSMD3	Del_8p23.3	0.0669	1
10q-Del	Del_9p21.3	0.0671	1
STAG2	Del_2q37.1	0.0672	1
DIAPH2	Amp_17q23.3	0.0675	1
ELF3	CNOT1	0.0675	1
STAG2	Del_16p13.3	0.0675	1
RBM10	Del_3p14.2	0.0675	1
EP300	Amp_10p14	0.0677	1
PHLDA3	Del_8p23.3	0.0678	1
ARID1B	Del_22q13.32	0.0681	1
RXRA	9q-Del	0.0683	1
FGFR3	HRAS	0.0685	1
FGFR3	ACTB	0.0685	1
STAG2	CUL1	0.0685	1
STAG2	3p-Amp	0.0685	1
RARG	5p-Amp	0.0685	1
FGFR3	Amp_5p15.33	0.0687	1
EXOSC10	Amp_10p14	0.069	1
ERBB2	9q-Del	0.0691	1
KLF5	Del_8p23.3	0.0691	1
HIST1H3B	Amp_3p25.2	0.0695	1
GNA13	Amp_3p25.2	0.0695	1
NCOA1	20q-Amp	0.07	1
PPARGC1A	Del_17p12	0.0711	1
ARID1A	9q-Del	0.0713	1
FGFR3	Del_13q14.2	0.0715	1
ZFP36L1	Del_9p21.3	0.0717	1
HSP90AA1	Amp_12q15	0.072	1
PTEN	8p-Del	0.0721	1
CASP8	8p-Del	0.0721	1
THRAP3	8p-Del	0.0721	1
TSC1	Amp_7p21.1	0.0724	1
ERBB3	KLF5	0.0728	1
NFE2L2	TP53	0.073	1
MED13	Amp_10p14	0.073	1
ACTB	Del_9p23	0.0741	1
HFM1	Del_2q22.1	0.0742	1
NFE2L2	Del_14q24.1	0.0746	1
11q-Del	Amp_7p11.2	0.0746	1
ATM	TP53	0.0751	1
KLF5	8p-Del	0.0753	1
KRAS	9q-Del	0.0754	1
KRAS	Del_5q12.1	0.0754	1
CASP8	9q-Del	0.0754	1
CASP8	Del_5q12.1	0.0754	1
EPS8	9q-Del	0.0754	1
HRAS	Del_10q23.31	0.076	1
DIAPH2	Amp_7p11.2	0.0765	1
STAG2	Amp_17q23.3	0.0766	1
PARD3	Del_9p23	0.0771	1
ARID1A	CDKN2A	0.0774	1
FBXW7	Amp_8p11.21	0.0779	1
PKHD1	Del_2q22.1	0.0779	1
ATAD5	Amp_8p11.21	0.0779	1
Amp_6p22.3	Del_9p23	0.078	1
NF2	Amp_20q11.21	0.0783	1
ZBTB7B	Amp_20q11.21	0.0783	1
TSC1	Del_3p14.2	0.0784	1
DDX3X	Del_18q23	0.0787	1
NAA15	Amp_5p15.33	0.0793	1
GTF2I	Amp_8q22.3	0.0796	1
PARD3	9q-Del	0.0798	1
HRAS	Del_4q34.2	0.08	1
KDM6A	CASP8	0.0801	1
FGFR3	ITGA4	0.0805	1
NEK11	Amp_8p11.23	0.0805	1
RHOA	Del_11q23.3	0.0809	1
ARID1B	Del_9p21.3	0.0809	1
7p-Amp	Del_9p21.3	0.0809	1
GPS2	PIK3CA	0.0813	1
DIAPH2	Amp_12q15	0.0814	1
DIAPH2	Amp_13q22.1	0.0814	1
DIAPH2	Del_6p25.3	0.0814	1
SF3B3	Del_16q23.1	0.0814	1
TRERF1	Amp_12q15	0.0814	1
TP53	Amp_4p16.3	0.0817	1
BAP1	5p-Amp	0.0822	1
Del_9p21.3	Del_22q13.32	0.0822	1
FGFR3	Amp_3q26.33	0.0829	1
STAG2	Amp_3q26.33	0.0829	1
FBXW7	Amp_6p22.3	0.083	1
NCOA1	Del_11q25	0.0831	1
Amp_1q23.3	Del_Xp11.3	0.0833	1
PARD3	18q-Del	0.0834	1
ARID1B	18q-Del	0.0834	1
ARID1A	20q-Amp	0.0835	1
DIAPH2	9p-Del	0.0835	1
FBXW7	Amp_1p34.2	0.0835	1
FBXW7	Del_5q12.1	0.0836	1
ATAD5	9q-Del	0.0836	1
KDM6A	NFE2L2	0.0838	1
DPYS	Amp_10p14	0.0839	1
Amp_10p14	Del_Xp11.3	0.0839	1
ATAD5	Amp_19q12	0.084	1
CCNE2	Del_9p21.3	0.084	1
SF3B3	Del_17p12	0.0842	1
KDM6A	OGDH	0.0846	1
KDM6A	Amp_4p16.3	0.0846	1
PIK3CA	Amp_1p34.2	0.0846	1
FGFR3	Amp_17q12	0.0848	1
PIK3CA	Amp_5p15.33	0.0861	1
TRERF1	20p-Amp	0.0866	1
CNOT1	20p-Amp	0.0866	1
17p-Del	Amp_11q22.2	0.0867	1
PSIP1	Amp_7p11.2	0.0868	1
15q-Del	Amp_7p11.2	0.0868	1
ELF3	Del_15q13.1	0.0874	1
OGDH	Del_3p14.2	0.0879	1
HLA-A	Del_8p21.3	0.0882	1
NFE2L2	Amp_1q21.3	0.0885	1
ZNF626	Del_9p21.3	0.0887	1
PPARGC1A	Amp_11q13.3	0.0888	1
SSH3	Amp_3q26.33	0.0888	1
ERCC2	4q-Del	0.0892	1
CTNNB1	17p-Del	0.0896	1
EP300	1q-Amp	0.0896	1
PTEN	11p-Del	0.0896	1
CASP8	11p-Del	0.0896	1
BAP1	17p-Del	0.0896	1
EPS8	11p-Del	0.0896	1
EPS8	17p-Del	0.0896	1
TP53	UGP2	0.0898	1
NF2	Del_9p21.3	0.0903	1
NF2	Del_11p15.5	0.0903	1
CNOT3	Del_11p15.5	0.0903	1
ZNF773	Del_9p21.3	0.0903	1
ATM	CREBBP	0.0904	1
CREBBP	PKHD1	0.0904	1
PKHD1	Amp_7p21.1	0.0904	1
PKHD1	Del_11q25	0.0904	1
THRAP3	Del_9p21.3	0.0909	1
EPS8	Del_9p21.3	0.0909	1
ARID2	Del_11q23.3	0.0915	1
TXNIP	Del_9p23	0.0917	1
ATM	Del_16p13.3	0.0918	1
PSIP1	Amp_13q22.1	0.092	1
DENND5B	Amp_13q22.1	0.092	1
22q-Del	Amp_17q12	0.092	1
9q-Del	Amp_10p14	0.0925	1
ELF3	Del_16q23.1	0.0926	1
ERCC2	9q-Del	0.0929	1
ARID1A	Del_19p13.3	0.093	1
FAT1	ZNF626	0.0933	1
CUL1	Del_11q23.3	0.0933	1
CTNNB1	Del_18q23	0.0936	1
CASP8	Del_18q23	0.0936	1
ZNF750	8q-Amp	0.0936	1
BAP1	Del_18q23	0.0936	1
EPS8	8q-Amp	0.0936	1
EPS8	Del_18q23	0.0936	1
TRERF1	Del_8p21.3	0.0941	1
11q-Del	Amp_8q22.3	0.0942	1
FGFR3	Amp_4q13.3	0.0946	1
STAG2	19q-Amp	0.0946	1
ZNF180	Del_16p13.3	0.0946	1
MARK2	Del_13q14.2	0.0947	1
RHOA	Del_11q25	0.095	1
ATM	14q-Del	0.0952	1
CDKN1A	Del_16p13.3	0.0953	1
CSMD3	Del_11p15.5	0.0953	1
11q-Del	Amp_8p11.23	0.0953	1
PKHD1	5p-Amp	0.0956	1
ERBB3	11q-Del	0.0957	1
RB1	5q-Del	0.0957	1
HRAS	Del_8p23.3	0.0958	1
NF1	Del_5q12.1	0.0958	1
ATM	Del_2q37.1	0.0964	1
DENND5B	20p-Amp	0.0976	1
ARID2	Del_2q22.1	0.0981	1
ACTB	Del_2q22.1	0.0982	1
CUL1	Amp_8p11.21	0.0982	1
CUL1	Del_2q22.1	0.0982	1
NFE2L2	Amp_20q11.21	0.0984	1
EPHA2	SPTAN1	0.0984	1
NCOA1	Amp_7p11.2	0.0984	1
FBXW7	Amp_8q22.3	0.0986	1
USP28	5p-Amp	0.0986	1
5q-Del	Amp_11q22.2	0.0986	1
ZNF486	Del_9p23	0.0988	1
ZNF511	Amp_20q11.21	0.099	1
FBXW7	4p-Del	0.0998	1
ARID1A	19p-Del	0.1	1
KLF5	17p-Del	0.1	1
NHLRC1	Amp_5p15.33	0.1	1
ZBTB7B	Del_2q37.1	0.1	1
LETMD1	Amp_5p15.33	0.1	1
PARD3	11p-Del	0.1	1
PSMC6	Del_2q37.1	0.1	1
UBA52	Amp_1q23.3	0.1	1
ZNF750	Amp_5p15.33	0.1	1
ARID1B	11p-Del	0.1	1
Amp_5p15.33	Del_1p36.11	0.1	1
HRAS	Amp_6p22.3	0.101	1
SPTAN1	Amp_5p15.33	0.101	1
SPTAN1	Amp_7p11.2	0.101	1
FGFR3	Amp_22q12.2	0.102	1
7p-Amp	Amp_17q12	0.102	1
10q-Del	Amp_7p11.2	0.102	1
CFHR4	KDM6A	0.103	1
ERBB2	HRAS	0.103	1
HRAS	Amp_19q12	0.103	1
KDM6A	KLF5	0.103	1
KDM6A	USP28	0.103	1
KDM6A	Del_Xp11.3	0.103	1
KLF5	TP53	0.103	1
CNOT1	8p-Del	0.103	1
18q-Del	Amp_17q12	0.103	1
DIAPH2	Del_14q24.1	0.104	1
ERCC2	Del_9p23	0.104	1
TP53	SSH3	0.104	1
ZNF180	Amp_3q26.33	0.104	1
DDX3X	Amp_8q22.3	0.104	1
NCOA1	Del_6p25.3	0.104	1
FAM47C	18q-Del	0.104	1
5p-Amp	Del_12p13.1	0.104	1
Amp_3q26.33	Amp_4q13.3	0.104	1
Amp_4p16.3	Del_6p25.3	0.104	1
Amp_4p16.3	Del_16q23.1	0.104	1
TBC1D12	Amp_6p22.3	0.105	1
AGR3	Amp_8q22.3	0.105	1
CSMD3	NFE2L3	0.106	1
FGFR3	Amp_13q22.1	0.106	1
FGFR3	Del_6p25.3	0.106	1
KDM6A	RHOA	0.106	1
STAG2	Amp_13q22.1	0.106	1
FAT1	Amp_10p14	0.106	1
CFHR4	11p-Del	0.107	1
STAG2	Amp_19q13.43	0.107	1
TSC1	Del_22q13.32	0.107	1
ARID2	Amp_1q21.3	0.107	1
PPP4R1	11p-Del	0.107	1
USP28	17p-Del	0.107	1
DIAPH2	9q-Del	0.108	1
ERBB2	20q-Amp	0.108	1
GTF2I	Del_11q23.3	0.108	1
NF1	4p-Del	0.108	1
PIK3CA	Amp_7p11.2	0.108	1
NEK11	Del_11q23.3	0.108	1
TRERF1	Del_8p23.3	0.108	1
CNOT1	9q-Del	0.108	1
CNOT1	Del_8p23.3	0.108	1
DNAH6	20q-Amp	0.108	1
Del_9p23	Del_16q23.1	0.108	1
C3orf70	Amp_7p21.1	0.109	1
CREBBP	HRAS	0.109	1
CREBBP	11p-Del	0.109	1
HRAS	Del_6q27	0.109	1
ACTB	Amp_7p21.1	0.109	1
PARD3	11q-Del	0.109	1
ARID1B	5q-Del	0.109	1
CUL1	Amp_7p21.1	0.109	1
CUL1	Del_11q25	0.109	1
7p-Amp	Del_19p13.3	0.109	1
CDKN1A	Amp_3q26.33	0.11	1
TP53	AGR3	0.11	1
NCOA1	20p-Amp	0.11	1
9p-Del	Amp_10p14	0.11	1
9q-Del	Amp_7p11.2	0.11	1
CTNNB1	FGFR3	0.111	1
FGFR3	FOXQ1	0.111	1
FGFR3	NFE2L3	0.111	1
FGFR3	PTEN	0.111	1
FGFR3	RUNX1	0.111	1
FGFR3	CASP8	0.111	1
METTL3	Amp_7p11.2	0.111	1
NF2	9p-Del	0.111	1
STAG2	Del_1p36.11	0.111	1
CASP8	Amp_8p11.23	0.111	1
MARK2	Del_18q23	0.111	1
MBD1	Del_18q23	0.111	1
THRAP3	Amp_8p11.23	0.111	1
ZNF750	Del_16p13.3	0.111	1
ZNF773	9p-Del	0.111	1
EPS8	Del_17p12	0.112	1
Amp_1p34.2	Del_6q27	0.112	1
Amp_1p34.2	Del_11q25	0.112	1
GTF2I	Amp_8p11.21	0.113	1
TSC1	16p-Del	0.113	1
MED13	Amp_7p11.2	0.113	1
MYO16	Amp_5p15.33	0.113	1
NEK11	Amp_8p11.21	0.113	1
PIK3CA	Amp_1q23.3	0.114	1
PSIP1	Amp_10p14	0.114	1
DENND5B	Amp_10p14	0.114	1
RBM10	Del_13q14.2	0.114	1
ZNF626	Del_3p14.2	0.114	1
CSMD3	8p-Del	0.115	1
FAT1	8p-Del	0.115	1
ERBB3	EPHA2	0.116	1
ERBB3	Amp_4p16.3	0.116	1
FBXW7	8q-Amp	0.116	1
FGFR3	22q-Del	0.116	1
KDM6A	HLA-A	0.116	1
KLF5	Amp_19q13.43	0.116	1
RB1	Amp_4p16.3	0.116	1
RXRA	Amp_8p11.23	0.116	1
ZFP36L1	14q-Del	0.116	1
HFM1	9p-Del	0.116	1
KDM5A	Del_9p21.3	0.116	1
NF1	RHOB	0.117	1
RBM10	Amp_1q23.3	0.117	1
9p-Del	Amp_7p21.1	0.117	1
CREBBP	Del_11q23.3	0.118	1
EP300	Del_11p15.5	0.118	1
TBC1D12	FAT1	0.118	1
RBM10	Del_4q22.1	0.118	1
SF3B3	Del_4q22.1	0.118	1
CNOT1	Del_4q22.1	0.118	1
5p-Amp	Del_1q32.1	0.118	1
Amp_7p21.1	Del_11q23.3	0.118	1
CREBBP	Del_18q23	0.119	1
ZNF180	Del_2q34	0.119	1
NAA15	Del_2q34	0.119	1
RHOA	Del_2q37.1	0.12	1
ASXL1	Del_19p13.3	0.12	1
5q-Del	Del_12p13.1	0.12	1
CTNNB1	Del_10q23.31	0.121	1
NFE2L2	Del_11p15.5	0.121	1
ATAD5	Amp_13q22.1	0.121	1
EXOSC10	Amp_11q13.3	0.121	1
MYO16	3q-Amp	0.121	1
ZNF750	Amp_11q13.3	0.121	1
ZNF750	Del_10q23.31	0.121	1
ATM	Amp_22q12.2	0.122	1
EP300	17p-Del	0.122	1
NFE2L2	Del_8p21.3	0.122	1
PIK3CA	Amp_4q13.3	0.122	1
FGFR3	FAT1	0.123	1
GTF2I	Del_9p21.3	0.123	1
STAG2	FAT1	0.123	1
TSC1	Del_8p23.3	0.123	1
ITGA4	Del_9p21.3	0.123	1
PPARGC1A	Del_9p21.3	0.123	1
DNAH6	Del_9p21.3	0.123	1
9q-Del	Del_16q23.1	0.123	1
CDKN2A	RB1	0.124	1
CREBBP	DNAH6	0.124	1
CREBBP	18q-Del	0.124	1
GTF2I	Del_11q25	0.124	1
RB1	TSC1	0.124	1
RHOA	Del_22q13.32	0.124	1
TSC1	4q-Del	0.124	1
ZBTB7B	Amp_10p14	0.124	1
ARID2	5p-Amp	0.124	1
DDX3X	Del_11q23.3	0.124	1
FAT1	NAA15	0.124	1
NDC80	Del_11q23.3	0.124	1
NEK11	Del_11q25	0.124	1
RARG	20q-Amp	0.124	1
ZNF773	Amp_10p14	0.124	1
CSMD3	9q-Del	0.125	1
ERBB2	Amp_8q22.3	0.125	1
ZFP36L2	Del_11p15.5	0.125	1
EPHA2	Del_17p12	0.125	1
C3orf70	Amp_7p11.2	0.126	1
HRAS	SPTAN1	0.126	1
CASP8	Del_4q34.2	0.126	1
CUL1	Amp_7p11.2	0.126	1
ARID1A	PROS1	0.127	1
EP300	Del_1q32.1	0.127	1
STAG2	8p-Del	0.127	1
TXNIP	Amp_20q11.21	0.127	1
17q-Amp	17p-Del	0.127	1
HIST1H2AG	Del_9p23	0.128	1
CCNE2	Del_9p23	0.128	1
IL10RB	Del_9p23	0.128	1
LETMD1	Del_9p23	0.128	1
SNRPB	Del_9p23	0.128	1
TAF11	Del_9p23	0.128	1
ZNF773	8p-Del	0.128	1
CDKN2A	20q-Amp	0.129	1
RHOB	FAT1	0.129	1
STAG2	Amp_5p15.33	0.129	1
TBC1D12	Amp_8p11.21	0.129	1
MARK2	Del_9p21.3	0.129	1
MBD1	Del_9p21.3	0.129	1
CFHR4	Del_16p13.3	0.13	1
FBXW7	SF3B1	0.13	1
FGFR3	DPYS	0.13	1
NFE2L2	Amp_16p13.2	0.13	1
PROS1	Amp_8p11.23	0.13	1
SF3B1	Amp_11q13.3	0.13	1
CTCF	Amp_8p11.23	0.13	1
HFM1	18q-Del	0.13	1
MYO16	Amp_3q26.33	0.13	1
MYO16	Amp_16p13.2	0.13	1
OGDH	18q-Del	0.13	1
KDM6A	SPTAN1	0.131	1
UBA52	Del_9p21.3	0.131	1
UNC93B1	Del_9p21.3	0.131	1
DIAPH2	17p-Del	0.132	1
EP300	RBM10	0.132	1
FGFR3	7p-Amp	0.132	1
HIST1H3B	8q-Amp	0.132	1
KDM6A	GNA13	0.132	1
KLF5	Del_16p13.3	0.132	1
NF2	9q-Del	0.132	1
PARD3	Del_16p13.3	0.132	1
SF3B3	17p-Del	0.132	1
STK32B	9q-Del	0.132	1
GNA13	8q-Amp	0.132	1
ZNF773	9q-Del	0.132	1
ARID1A	TP53	0.133	1
CNNM4	Del_9p21.3	0.133	1
ERBB3	Amp_10p14	0.133	1
HRAS	Amp_13q22.1	0.133	1
KLF5	10q-Del	0.133	1
NCOA1	Amp_10p14	0.133	1
PARD3	3q-Amp	0.133	1
RIPK4	Amp_13q22.1	0.133	1
ARID1B	6q-Del	0.133	1
Amp_11q13.3	Del_2q34	0.133	1
Amp_12q15	Del_13q14.2	0.133	1
Amp_16p13.2	Del_9p23	0.133	1
ARID1A	NRAS	0.134	1
ARID1A	GLTP	0.134	1
ARID1A	ZBTB47	0.134	1
FGFR3	Del_15q13.1	0.134	1
UBA52	Amp_5p15.33	0.134	1
SPTAN1	Amp_8q22.3	0.134	1
FGFR3	Amp_8p11.21	0.135	1
KLF5	Amp_5p15.33	0.135	1
PIK3CA	SCARF2	0.135	1
SHANK1	Amp_5p15.33	0.135	1
TSC1	Del_14q24.1	0.135	1
CASP8	Amp_8q22.3	0.135	1
EPS8	Amp_8q22.3	0.135	1
MIPOL1	9p-Del	0.136	1
RB1	NKX2-2	0.136	1
CDK12	4p-Del	0.136	1
20q-Amp	Del_13q14.2	0.136	1
ATM	SF3B1	0.137	1
ATM	16p-Del	0.137	1
ATM	22q-Del	0.137	1
CDKN2A	Amp_8p11.21	0.137	1
FBXW7	TP53	0.137	1
RB1	18q-Del	0.137	1
TSC1	Amp_1q23.3	0.137	1
ARID2	Amp_22q12.2	0.137	1
CNOT3	Del_13q14.2	0.137	1
FUS	Amp_3p25.2	0.137	1
Amp_11q22.2	Del_4q34.2	0.137	1
ASXL2	15q-Del	0.138	1
CDKN1A	KDM6A	0.138	1
CSMD3	FGFR3	0.138	1
CSMD3	STAG2	0.138	1
CSMD3	Del_16p13.3	0.138	1
DDX3X	Del_8p21.3	0.138	1
CTNNB1	Del_9p23	0.139	1
DIAPH2	8q-Amp	0.139	1
EP300	ARID2	0.139	1
KRAS	Del_9p23	0.139	1
PLCXD3	Amp_1q23.3	0.139	1
RUNX1	Del_9p23	0.139	1
TP53	SPTAN1	0.139	1
CASP8	Del_9p23	0.139	1
RBP2	Amp_1q23.3	0.139	1
C3orf70	Del_22q13.32	0.14	1
CFHR4	Del_17p12	0.14	1
CSMD3	FBXW7	0.14	1
USP28	Del_17p12	0.14	1
KLF5	Del_11p15.5	0.141	1
PIK3CA	20p-Amp	0.141	1
ZNF486	Del_11p15.5	0.141	1
ACTB	Del_2q37.1	0.141	1
CPD	Amp_19q13.43	0.141	1
MBD1	Amp_3q26.33	0.141	1
OR10Z1	Del_11p15.5	0.141	1
RBM10	Amp_19q13.43	0.141	1
SF3B3	Amp_19q13.43	0.141	1
FBXW7	4q-Del	0.142	1
KLF5	Amp_16p13.2	0.142	1
RPTN	Del_6q27	0.142	1
TP53	11p-Del	0.142	1
ZBTB7B	Amp_1q23.3	0.142	1
CDK12	9q-Del	0.142	1
DDX3X	Del_11q25	0.142	1
18q-Del	Amp_6p22.3	0.142	1
Amp_4q13.3	Del_11q25	0.142	1
Amp_8q22.3	Del_9p21.3	0.142	1
ASXL2	Amp_8p11.21	0.143	1
CDKN1A	Amp_3p25.2	0.143	1
KRAS	FAT1	0.143	1
KRAS	20q-Amp	0.143	1
KRAS	Del_11q23.3	0.143	1
PTEN	FAT1	0.143	1
PPARGC1A	Amp_7p11.2	0.143	1
WAC	Del_11q23.3	0.143	1
1q-Amp	20q-Amp	0.143	1
Amp_17q12	Del_19p13.3	0.143	1
CREBBP	PIK3CA	0.144	1
DIAPH2	Del_9p21.3	0.144	1
FAT1	Amp_6p22.3	0.144	1
RBM26	Amp_1q23.3	0.144	1
UBA52	Del_17p12	0.144	1
KDM6A	18q-Del	0.145	1
HFM1	Del_4q22.1	0.145	1
ASXL1	3q-Amp	0.145	1
KLF5	Amp_3q26.33	0.146	1
PIK3CA	DENND5B	0.146	1
FAT1	11q-Del	0.146	1
HFM1	9q-Del	0.146	1
PARD3	Amp_3q26.33	0.146	1
PARD3	Amp_11q13.3	0.146	1
ATM	MARK2	0.147	1
ATM	Del_22q13.32	0.147	1
CFHR4	Del_4q34.2	0.147	1
DIAPH2	Amp_1q21.3	0.147	1
ERBB3	ZNF626	0.147	1
RPTN	Amp_6p22.3	0.147	1
ARID2	8q-Amp	0.147	1
MARK2	Del_4q34.2	0.147	1
PPARG	Del_4q34.2	0.147	1
RBM26	Del_19p13.3	0.147	1
20q-Amp	5p-Amp	0.147	1
7q-Amp	Del_19p13.3	0.147	1
CSMD3	18q-Del	0.148	1
ELF3	ZNF180	0.148	1
ELF3	DDX3X	0.148	1
ELF3	NAA15	0.148	1
ERBB2	FGFR3	0.148	1
FBXW7	PIK3CA	0.148	1
STAG2	Amp_19q12	0.148	1
NDC80	Amp_17q23.3	0.148	1
20p-Amp	Del_13q14.2	0.148	1
FBXW7	FGFR3	0.149	1
FGFR3	ATAD5	0.149	1
FGFR3	MED13	0.149	1
GTF2I	Del_11p15.5	0.149	1
KDM6A	Del_18q23	0.149	1
NFE2L2	ZFP36L1	0.149	1
PIK3CA	EPS8	0.149	1
PIK3CA	1q-Amp	0.149	1
PKHD1	STAG2	0.149	1
RXRA	ZFP36L1	0.149	1
TSC1	Amp_10p14	0.149	1
ARID2	Amp_11q22.2	0.149	1
CASP8	Amp_8p11.21	0.149	1
MED13	Amp_8p11.23	0.149	1
CDH1	Del_2q22.1	0.149	1
FGFR3	Del_16p13.3	0.15	1
GPS2	Amp_10p14	0.15	1
GTF2I	Amp_13q22.1	0.15	1
MIPOL1	Amp_10p14	0.15	1
TBC1D12	Del_4q22.1	0.15	1
TSC1	CPD	0.15	1
TSC1	FAM47C	0.15	1
ITGA4	Amp_12q15	0.15	1
PHLDA3	Amp_1q21.3	0.15	1
PPARGC1A	Amp_13q22.1	0.15	1
SSH3	Del_6p25.3	0.15	1
DNAH6	Amp_13q22.1	0.15	1
CREBBP	Del_11p15.5	0.151	1
ARID1A	Del_9p21.3	0.152	1
EP300	PSMC6	0.152	1
NF1	4q-Del	0.152	1
NF2	11p-Del	0.152	1
NF2	17p-Del	0.152	1
RXRA	TP53	0.152	1
SF3B1	TP53	0.152	1
CNOT3	11p-Del	0.152	1
CNOT3	17p-Del	0.152	1
11p-Del	Amp_6q21	0.152	1
CDKN2A	8p-Del	0.153	1
ERBB3	Del_11p15.5	0.153	1
ERCC2	RHOA	0.153	1
ERCC2	9p-Del	0.153	1
IDH1	Del_2q37.1	0.153	1
NFE2L2	Amp_1q23.3	0.153	1
NFE2L2	Del_2q34	0.153	1
STAG2	17q-Amp	0.153	1
KDM5A	Amp_17q12	0.153	1
EP300	Amp_20q11.21	0.154	1
19p-Del	Amp_6p22.3	0.154	1
ERBB2	GPR50	0.155	1
ERBB2	BAP1	0.155	1
GPS2	8p-Del	0.155	1
KLF5	Del_17p12	0.155	1
PSIP1	Amp_19q13.43	0.155	1
ZNF511	8p-Del	0.155	1
ATAD5	Del_12p13.1	0.155	1
CASP8	Amp_19q12	0.155	1
FAT1	Amp_7p11.2	0.155	1
IKZF2	Amp_19q12	0.155	1
ZNF750	Amp_19q12	0.155	1
ZBTB7B	Del_18q23	0.157	1
TXNIP	20p-Amp	0.157	1
DNAH6	20p-Amp	0.157	1
20p-Amp	Amp_1p34.2	0.157	1
CDKN2A	Del_9p21.3	0.158	1
KDM6A	ADC	0.158	1
NHLRC1	Amp_20q11.21	0.158	1
STAG2	18q-Del	0.158	1
ARID1A	17q-Amp	0.159	1
DIAPH2	6q-Del	0.159	1
MIPOL1	9q-Del	0.159	1
SF1	9q-Del	0.159	1
RBM26	8q-Amp	0.159	1
SF3B3	10q-Del	0.159	1
CNOT1	10q-Del	0.159	1
FAM47C	3q-Amp	0.159	1
GNA13	Amp_5p15.33	0.159	1
Amp_5p15.33	Del_Xq21.33	0.159	1
C3orf70	9p-Del	0.16	1
FBXW7	18q-Del	0.16	1
HRAS	9p-Del	0.16	1
PKHD1	18q-Del	0.16	1
RB1	RIPK4	0.16	1
RB1	SLC9A4	0.16	1
ACTB	9p-Del	0.16	1
HFM1	Del_9p23	0.16	1
KDM5A	Del_9p23	0.16	1
MED13	18q-Del	0.16	1
NCOA1	Del_9p23	0.16	1
SLC9A4	9p-Del	0.16	1
CUL1	9p-Del	0.16	1
18q-Del	Amp_16p13.2	0.16	1
9p-Del	Amp_16p13.2	0.16	1
CSMD3	TRERF1	0.161	1
FGFR3	Amp_1q23.3	0.161	1
GPS2	Del_8p21.3	0.161	1
ZNF511	Del_8p21.3	0.161	1
Amp_17q12	Del_2q37.1	0.161	1
C3orf70	18q-Del	0.162	1
KDM6A	PPARGC1A	0.162	1
KLF5	Amp_1p34.2	0.162	1
KRAS	Amp_7p21.1	0.162	1
KRAS	Del_6q27	0.162	1
KRAS	Del_11q25	0.162	1
PTEN	Del_11q25	0.162	1
RB1	SPTAN1	0.162	1
RUNX1	Amp_7p21.1	0.162	1
SF3B1	FAT1	0.162	1
TBC1D12	WAC	0.162	1
ZFP36L1	4q-Del	0.162	1
ZFP36L2	18q-Del	0.162	1
CPD	Amp_8q22.3	0.162	1
DCDC1	Del_11q25	0.162	1
FAT1	Amp_11q22.2	0.162	1
IKZF2	Del_6q27	0.162	1
MYO16	20q-Amp	0.162	1
MYO16	Del_11q23.3	0.162	1
NAA15	Amp_7p11.2	0.162	1
NCOA1	11q-Del	0.162	1
PARD3	Amp_1p34.2	0.162	1
THRAP3	Del_11q25	0.162	1
ZNF750	Del_6q27	0.162	1
ZNF750	Del_11q25	0.162	1
ARID1B	Del_2q37.1	0.162	1
CDH1	Del_11q25	0.162	1
OGDH	5q-Del	0.162	1
OGDH	Del_19p13.3	0.162	1
7p-Amp	Amp_1p34.2	0.162	1
FGFR3	Amp_7p21.1	0.163	1
RB1	SF3B1	0.163	1
RB1	MYO16	0.163	1
STAG2	TBC1D12	0.163	1
STAG2	5p-Amp	0.163	1
MYO16	9p-Del	0.163	1
ARID1A	CUL1	0.164	1
C3orf70	Amp_5p15.33	0.164	1
TSC1	RBM26	0.164	1
ACTB	Amp_5p15.33	0.164	1
17p-Del	Amp_12q15	0.164	1
Amp_7p11.2	Del_9p21.3	0.164	1
CFHR4	FAT1	0.165	1
CFHR4	20q-Amp	0.165	1
CREBBP	Amp_17q23.3	0.165	1
NF1	Del_12p13.1	0.165	1
HRAS	TP53	0.166	1
NF1	Amp_8p11.23	0.166	1
PIK3CA	Del_16p13.3	0.166	1
TSC1	Del_2q34	0.166	1
UBA52	Del_9p23	0.166	1
UNC93B1	Del_9p23	0.166	1
18q-Del	Amp_10p14	0.166	1
IDH1	9p-Del	0.167	1
RB1	UGP2	0.167	1
CDK12	Amp_7p11.2	0.167	1
RARG	Del_9p21.3	0.167	1
DNAH6	Del_2q37.1	0.167	1
FUS	9p-Del	0.167	1
CDKN1A	Amp_19q12	0.168	1
Amp_11q13.3	Del_2q37.1	0.168	1
CTNNB1	ELF3	0.169	1
DIAPH2	STAG2	0.169	1
DIAPH2	ATAD5	0.169	1
DIAPH2	Amp_16p13.2	0.169	1
ELF3	PTEN	0.169	1
ELF3	CDH1	0.169	1
FBXW7	TRERF1	0.169	1
FBXW7	Amp_3q26.33	0.169	1
FGFR3	FAM47C	0.169	1
KRAS	Del_3p14.2	0.169	1
SHANK1	9q-Del	0.169	1
TBC1D12	Del_5q12.1	0.169	1
ZNF180	Amp_12q15	0.169	1
CASP8	Amp_17q23.3	0.169	1
NDC80	Amp_12q15	0.169	1
SF3B3	Amp_16p13.2	0.169	1
TRERF1	Amp_8p11.23	0.169	1
TRERF1	Amp_16p13.2	0.169	1
TRERF1	Del_16p13.3	0.169	1
18q-Del	Amp_12q15	0.169	1
9q-Del	Amp_7p21.1	0.169	1
Del_9p21.3	Del_10q23.31	0.169	1
ATM	17q-Amp	0.17	1
PROS1	Del_9p23	0.17	1
RHOA	Amp_17q12	0.17	1
RHOB	Amp_22q12.2	0.17	1
SHANK1	Amp_17q12	0.17	1
19q-Amp	Amp_3p25.2	0.17	1
CFHR4	Del_2q22.1	0.171	1
EP300	Del_11q23.3	0.171	1
GPR50	Amp_1q21.3	0.171	1
KLF5	Del_2q34	0.171	1
NFE2L2	14q-Del	0.171	1
NFE2L2	Amp_8p11.21	0.171	1
RXRA	Del_9p23	0.171	1
SF3B1	Amp_8p11.21	0.171	1
SF3B1	Del_2q22.1	0.171	1
CASP8	Amp_1q21.3	0.171	1
CDK12	16p-Del	0.171	1
NCOA1	Amp_19q13.43	0.171	1
PPARG	Amp_8p11.21	0.171	1
PPP4R1	Del_2q22.1	0.171	1
SNRPB	Amp_3p25.2	0.171	1
CDH1	Amp_1q21.3	0.171	1
ATM	Del_8p21.3	0.172	1
CREBBP	Amp_22q12.2	0.172	1
TBC1D12	Amp_22q12.2	0.172	1
RBM26	Amp_1q21.3	0.172	1
ERBB2	Amp_11q13.3	0.173	1
MIPOL1	TP53	0.173	1
Amp_11q13.3	Amp_19q12	0.173	1
EP300	Amp_4p16.3	0.174	1
POTEG	Amp_8q22.3	0.174	1
PSIP1	6q-Del	0.174	1
ZNF511	Del_8p23.3	0.174	1
DENND5B	10q-Del	0.174	1
DENND5B	6q-Del	0.174	1
EPHA2	17p-Del	0.174	1
HFM1	11p-Del	0.174	1
NCOA1	11p-Del	0.174	1
RBM26	3q-Amp	0.174	1
RBM26	6q-Del	0.174	1
FUS	Amp_8q22.3	0.174	1
OGDH	11p-Del	0.174	1
CSMD3	ZFP36L1	0.175	1
CSMD3	11p-Del	0.175	1
CTNNB1	Del_8p21.3	0.175	1
RB1	Amp_8q22.3	0.175	1
CCNE2	Del_11p15.5	0.175	1
EXOSC10	Del_8p21.3	0.175	1
USP28	Amp_8q22.3	0.175	1
SCARF2	Del_11p15.5	0.175	1
ASXL2	Del_3p14.2	0.176	1
ZFP36L1	Del_12p13.1	0.176	1
TSC1	20q-Amp	0.177	1
TSC1	Del_11q23.3	0.177	1
ZNF180	Del_22q13.32	0.177	1
PROS1	Amp_19q12	0.178	1
STAG2	Del_3p14.2	0.178	1
TSC1	Del_13q14.2	0.178	1
ZFP36L1	Del_9p23	0.178	1
CTCF	Amp_19q12	0.178	1
MARK2	Amp_19q12	0.178	1
Amp_1p34.2	Del_9p23	0.178	1
CREBBP	11q-Del	0.179	1
DIAPH2	NF1	0.179	1
FGFR3	NF2	0.179	1
FGFR3	STK32B	0.179	1
FGFR3	Amp_6q21	0.179	1
HRAS	Del_4q22.1	0.179	1
RHOA	11q-Del	0.179	1
ZBTB7B	Del_16p13.3	0.179	1
PSMC6	Del_16p13.3	0.179	1
ZNF773	Del_16p13.3	0.179	1
11q-Del	Amp_7p21.1	0.179	1
15q-Del	Amp_6p22.3	0.179	1
C3orf70	Amp_10p14	0.18	1
CNNM4	11p-Del	0.18	1
CNNM4	17p-Del	0.18	1
KLF5	FAT1	0.18	1
KLF5	Del_11q23.3	0.18	1
RB1	Amp_12q15	0.18	1
TSC1	KDM5A	0.18	1
FAT1	PARD3	0.18	1
NKX2-2	17p-Del	0.18	1
PARD3	20q-Amp	0.18	1
PARD3	Del_11q23.3	0.18	1
RIPK4	Amp_10p14	0.18	1
SLC9A4	Amp_10p14	0.18	1
9p-Del	Del_16q23.1	0.18	1
Amp_11q13.3	Del_13q14.2	0.18	1
PIK3CA	Del_Xp11.3	0.181	1
STAG2	Amp_8q22.3	0.181	1
ASXL2	6q-Del	0.182	1
TBC1D12	Del_13q14.2	0.182	1
ZNF486	Amp_10p14	0.182	1
CPD	Amp_3p25.2	0.182	1
NCOA1	Del_18q23	0.182	1
OGDH	8q-Amp	0.182	1
CSMD3	15q-Del	0.183	1
CTNNB1	SPTAN1	0.183	1
FOXA1	SPTAN1	0.183	1
FOXQ1	SPTAN1	0.183	1
GPR50	Amp_20q11.21	0.183	1
KRAS	SPTAN1	0.183	1
KRAS	Amp_7p11.2	0.183	1
METTL3	5p-Amp	0.183	1
RHOB	MYO16	0.183	1
RHOB	16p-Del	0.183	1
RUNX1	Amp_7p11.2	0.183	1
CASP8	Amp_20q11.21	0.183	1
EXOSC10	SPTAN1	0.183	1
ASXL1	Del_17p12	0.183	1
EPS8	Amp_7p11.2	0.183	1
TMCO4	Del_2q34	0.183	1
CDKN2A	Amp_7p11.2	0.184	1
FBXW7	15q-Del	0.184	1
PKHD1	15q-Del	0.184	1
TSC1	Amp_3p25.2	0.184	1
CDK12	4q-Del	0.184	1
DENND5B	Amp_16p13.2	0.184	1
FAT1	20p-Amp	0.184	1
FAT1	8q-Amp	0.184	1
ARID1B	4p-Del	0.184	1
CFHR4	Del_6q27	0.185	1
CFHR4	Del_11q25	0.185	1
FGFR3	ZFP36L1	0.185	1
TBC1D12	Del_Xp11.3	0.185	1
ARID2	Amp_8p11.23	0.185	1
CTCF	Del_11q25	0.185	1
FAT1	Del_2q34	0.185	1
MARK2	Del_6q27	0.185	1
MBD1	Amp_7p21.1	0.185	1
PPARG	Del_11q25	0.185	1
Del_9p21.3	Del_16p13.3	0.185	1
CREBBP	Del_2q37.1	0.186	1
KLF5	9p-Del	0.186	1
MIPOL1	Del_18q23	0.186	1
RB1	7p-Amp	0.186	1
RBM10	Del_10q23.31	0.186	1
TRERF1	Amp_11q13.3	0.186	1
TXNIP	9p-Del	0.186	1
8q-Amp	4p-Del	0.186	1
HRAS	8p-Del	0.187	1
IDH1	8p-Del	0.187	1
PIK3CA	Amp_11q22.2	0.187	1
FUS	8p-Del	0.187	1
ASXL2	RIPK4	0.188	1
ASXL2	3p-Amp	0.188	1
NFE2L2	Amp_10p14	0.188	1
RXRA	Amp_10p14	0.188	1
CDK12	20p-Amp	0.188	1
RIPK4	Amp_17q12	0.188	1
ARID1A	CDKN1A	0.189	1
C12orf43	Del_2q37.1	0.189	1
DIAPH2	Del_11p15.5	0.189	1
NHLRC1	Del_2q37.1	0.189	1
TSC1	Del_2q22.1	0.189	1
IL10RB	Del_2q37.1	0.189	1
TAF11	Del_2q37.1	0.189	1
11q-Del	Amp_5p15.33	0.189	1
NFE2L2	Amp_7p21.1	0.19	1
RXRA	Amp_7p21.1	0.19	1
TBC1D12	Amp_11q22.2	0.19	1
ZFP36L1	SF3B3	0.19	1
ZFP36L1	Del_14q24.1	0.19	1
ARID2	CPD	0.19	1
ARID2	FAM47C	0.19	1
FAT1	Amp_3p25.2	0.19	1
FAT1	Del_Xq21.33	0.19	1
MYO16	Del_11q25	0.19	1
RBM10	Amp_1p34.2	0.19	1
ARID1B	Del_2q22.1	0.19	1
GNA13	20q-Amp	0.19	1
GNA13	Del_11q23.3	0.19	1
FGFR3	7q-Amp	0.191	1
FGFR3	15q-Del	0.191	1
FOXQ1	Amp_12q15	0.191	1
KRAS	Del_6p25.3	0.191	1
PSIP1	Amp_8p11.23	0.191	1
PTEN	Amp_12q15	0.191	1
RUNX1	Amp_13q22.1	0.191	1
ZBTB7B	Amp_3q26.33	0.191	1
ZBTB7B	Del_10q23.31	0.191	1
CASP8	Del_6p25.3	0.191	1
DCDC1	Amp_12q15	0.191	1
DCDC1	Del_8p23.3	0.191	1
EXOSC10	Amp_12q15	0.191	1
NCOA1	6q-Del	0.191	1
PSMC6	Amp_3q26.33	0.191	1
STK32B	Amp_3q26.33	0.191	1
THRAP3	Del_8p23.3	0.191	1
UBA52	Amp_1q21.3	0.191	1
ZNF750	Del_6p25.3	0.191	1
CNOT3	Amp_11q13.3	0.191	1
OGDH	6q-Del	0.191	1
ZNF773	Amp_11q13.3	0.191	1
1q-Amp	Amp_13q22.1	0.191	1
1q-Amp	Del_8p23.3	0.191	1
10q-Del	Amp_4p16.3	0.191	1
Amp_6q21	Amp_11q13.3	0.191	1
ARID1A	DIAPH2	0.192	1
CDKN1A	Amp_17q23.3	0.192	1
ELF3	PROS1	0.192	1
ERBB2	Amp_20q11.21	0.192	1
IDH1	9q-Del	0.192	1
IDH1	Del_5q12.1	0.192	1
PROS1	Del_3p14.2	0.192	1
ZNF486	Del_9p21.3	0.192	1
MBD1	Amp_17q23.3	0.192	1
OR10Z1	Del_9p21.3	0.192	1
USP28	Del_3p14.2	0.192	1
FUS	9q-Del	0.192	1
FUS	Del_5q12.1	0.192	1
FUS	Del_9p21.3	0.192	1
Amp_20q11.21	Del_4q22.1	0.192	1
ATM	18q-Del	0.194	1
ATM	Del_14q24.1	0.194	1
C3orf70	9q-Del	0.194	1
HRAS	9q-Del	0.194	1
HRAS	Del_5q12.1	0.194	1
ZFP36L2	9q-Del	0.194	1
ACTB	Del_5q12.1	0.194	1
ZNF626	9q-Del	0.194	1
CUL1	9q-Del	0.194	1
SPTAN1	Amp_7p21.1	0.194	1
ZNF185	Amp_1q23.3	0.194	1
ERBB2	Amp_13q22.1	0.195	1
ERBB2	Del_16q23.1	0.195	1
FAT1	10q-Del	0.195	1
FAM47C	Del_4q34.2	0.195	1
5p-Amp	Del_6q27	0.195	1
CREBBP	Amp_19q13.43	0.196	1
KDM6A	Amp_11q22.2	0.196	1
MYO16	Amp_22q12.2	0.196	1
NAA15	Del_2q37.1	0.196	1
C3orf70	Del_19p13.3	0.197	1
CDKN1A	RIPK4	0.197	1
HIST1H3B	Amp_8p11.21	0.197	1
HRAS	5q-Del	0.197	1
ZFP36L2	Del_19p13.3	0.197	1
CUL1	11q-Del	0.197	1
GNA13	Del_2q22.1	0.197	1
3p-Amp	5q-Del	0.197	1
CDKN2A	11p-Del	0.198	1
CSMD3	SPTAN1	0.198	1
KDM6A	RARG	0.198	1
ATAD5	8p-Del	0.198	1
SSH3	Del_4q22.1	0.198	1
STK32B	Amp_5p15.33	0.198	1
Del_6p25.3	Del_9p21.3	0.198	1
EP300	SHANK1	0.199	1
ERCC2	Amp_11q13.3	0.199	1
FOXQ1	Del_22q13.32	0.199	1
GPR50	Del_22q13.32	0.199	1
KRAS	20p-Amp	0.199	1
KRAS	Del_22q13.32	0.199	1
NFE2L3	20p-Amp	0.199	1
RHOA	Del_8p23.3	0.199	1
CASP8	Del_22q13.32	0.199	1
ZNF750	20p-Amp	0.199	1
1q-Amp	20p-Amp	0.199	1
Amp_3p25.2	Del_9p23	0.199	1
Amp_12q15	Del_4q22.1	0.199	1
ELF3	SF3B1	0.2	1
ERBB3	4p-Del	0.2	1
PLCXD3	Del_9p21.3	0.2	1
UNC93B1	Amp_20q11.21	0.2	1
ASXL2	Amp_7p11.2	0.201	1
FBXW7	EPHA2	0.201	1
PIK3CA	Amp_19q13.43	0.201	1
PKHD1	Amp_4p16.3	0.201	1
ZNF180	18q-Del	0.201	1
DDX3X	18q-Del	0.201	1
EPHA2	MED13	0.201	1
EPHA2	Amp_1q21.3	0.201	1
FAT1	HSP90AA1	0.201	1
NDC80	Del_14q24.1	0.201	1
Amp_4p16.3	Amp_16p13.2	0.201	1
KRAS	Amp_3p25.2	0.202	1
CDH1	Amp_3p25.2	0.202	1
SPTAN1	Amp_22q12.2	0.202	1
CREBBP	Del_4q34.2	0.203	1
FOXA1	Amp_1q23.3	0.203	1
KRAS	Amp_1q23.3	0.203	1
RB1	ARID2	0.203	1
TSC1	Del_8p21.3	0.203	1
FAT1	Del_11p15.5	0.203	1
UGP2	5p-Amp	0.203	1
EPS8	Amp_1q23.3	0.203	1
9p-Del	Amp_1p34.2	0.203	1
BTG2	RB1	0.204	1
C12orf43	9p-Del	0.204	1
C3orf70	Del_9p21.3	0.204	1
CNNM4	CSMD3	0.204	1
HIST1H3B	Amp_19q12	0.204	1
RB1	TGIF2LX	0.204	1
RB1	SCARF2	0.204	1
ACTB	Del_9p21.3	0.204	1
CCNE2	9p-Del	0.204	1
IL10RB	9p-Del	0.204	1
LETMD1	9p-Del	0.204	1
TAF11	9p-Del	0.204	1
SCARF2	9p-Del	0.204	1
ELF3	Del_10q23.31	0.205	1
ERBB2	9p-Del	0.205	1
17p-Del	Amp_19q12	0.205	1
Amp_10p14	Del_4q22.1	0.205	1
Amp_17q23.3	Del_2q37.1	0.205	1
CDKN2A	20p-Amp	0.206	1
STAG2	Del_18q23	0.206	1
MYO16	9q-Del	0.206	1
ATM	Del_8p23.3	0.207	1
CFHR4	SPTAN1	0.207	1
CSMD3	OGDH	0.207	1
CSMD3	Amp_4p16.3	0.207	1
ERBB3	EXOSC10	0.207	1
PROS1	Amp_7p11.2	0.207	1
PSIP1	ZFP36L1	0.207	1
MARK2	SPTAN1	0.207	1
RIPK4	Amp_19q13.43	0.207	1
ZNF626	Amp_19q13.43	0.207	1
7q-Amp	Amp_1p34.2	0.207	1
Amp_1p34.2	Amp_11q13.3	0.207	1
METTL3	10q-Del	0.208	1
SHANK1	Del_15q13.1	0.208	1
CASP8	Del_11p15.5	0.208	1
EXOSC10	Del_11p15.5	0.208	1
SSH3	Amp_10p14	0.208	1
EPS8	Del_11p15.5	0.208	1
ELF3	Amp_19q13.43	0.209	1
NFE2L2	RXRA	0.209	1
NFE2L2	16p-Del	0.209	1
NFE2L2	Amp_11q22.2	0.209	1
MYO16	16p-Del	0.209	1
MYO16	Amp_11q22.2	0.209	1
RBM26	Del_10q23.31	0.209	1
3q-Amp	5p-Amp	0.209	1
22q-Del	Amp_11q22.2	0.209	1
4p-Del	Amp_8q22.3	0.209	1
Amp_7p11.2	Del_11p15.5	0.209	1
C3orf70	5p-Amp	0.21	1
CREBBP	PARD3	0.21	1
CREBBP	Amp_12q15	0.21	1
CREBBP	Amp_13q22.1	0.21	1
CREBBP	Del_6p25.3	0.21	1
ERCC2	19q-Amp	0.21	1
KLF5	Amp_7p21.1	0.21	1
KLF5	Del_11q25	0.21	1
NF1	Amp_10p14	0.21	1
TBC1D12	7p-Amp	0.21	1
TBC1D12	Amp_13q22.1	0.21	1
ZNF511	Del_16p13.3	0.21	1
ACTB	5p-Amp	0.21	1
ATAD5	Del_19p13.3	0.21	1
MED13	11q-Del	0.21	1
NKX2-2	Del_16p13.3	0.21	1
TFG	Amp_8p11.23	0.21	1
ARID1B	Amp_7p21.1	0.21	1
ARID1B	Del_6q27	0.21	1
ARID1B	Del_11q25	0.21	1
3p-Amp	5p-Amp	0.21	1
7p-Amp	Del_11q25	0.21	1
4q-Del	Amp_22q12.2	0.21	1
9q-Del	Amp_5p15.33	0.21	1
ASXL2	Amp_8p11.23	0.211	1
CREBBP	TMCO4	0.211	1
CREBBP	Del_Xq21.33	0.211	1
STAG2	SPTAN1	0.211	1
STAG2	Amp_17q12	0.211	1
TBC1D12	TMCO4	0.211	1
ZBTB7B	Del_2q34	0.211	1
PSMC6	Del_2q34	0.211	1
ASXL1	Del_2q22.1	0.211	1
CNOT3	Del_2q34	0.211	1
GNA13	Amp_7p21.1	0.211	1
SPTAN1	8p-Del	0.211	1
Amp_7p21.1	Del_1q32.1	0.211	1
ERBB2	20p-Amp	0.212	1
RB1	ASXL1	0.212	1
CTNNB1	TP53	0.213	1
TP53	1q-Amp	0.213	1
TP53	Del_1p36.11	0.213	1
20p-Amp	Del_4q22.1	0.213	1
5p-Amp	Amp_17q23.3	0.213	1
5p-Amp	Amp_20q11.21	0.213	1
5p-Amp	Del_3p14.2	0.213	1
4q-Del	Amp_10p14	0.213	1
ARID1A	Amp_22q12.2	0.214	1
DIAPH2	14q-Del	0.214	1
EP300	IDH1	0.214	1
EP300	OR10Z1	0.214	1
POTEG	17p-Del	0.214	1
SARNP	11p-Del	0.214	1
SARNP	17p-Del	0.214	1
TSC1	Del_6q27	0.214	1
ZNF486	11p-Del	0.214	1
OR10Z1	11p-Del	0.214	1
CNOT1	4p-Del	0.214	1
FAM47C	4p-Del	0.214	1
CFHR4	Amp_13q22.1	0.215	1
FGFR3	NCOA1	0.215	1
PROS1	Amp_12q15	0.215	1
ZBTB7B	Del_17p12	0.215	1
CTCF	Amp_12q15	0.215	1
DPYS	Amp_12q15	0.215	1
MARK2	Amp_13q22.1	0.215	1
MBD1	Del_16q23.1	0.215	1
PPP4R1	Amp_13q22.1	0.215	1
PSMC6	Del_17p12	0.215	1
RBP2	Del_9p23	0.215	1
CNOT3	Del_17p12	0.215	1
ZNF773	Del_17p12	0.215	1
CSMD3	14q-Del	0.216	1
NFE2L2	Del_13q14.2	0.216	1
PIK3CA	7p-Amp	0.216	1
RXRA	Del_13q14.2	0.216	1
ARID2	Del_4q22.1	0.216	1
SSH3	8p-Del	0.216	1
HRAS	TSC1	0.217	1
RB1	DDX3X	0.217	1
TSC1	3p-Amp	0.217	1
ITGA4	Del_19p13.3	0.217	1
PPARGC1A	5q-Del	0.217	1
PPARGC1A	Del_19p13.3	0.217	1
DNAH6	11q-Del	0.217	1
DNAH6	Del_19p13.3	0.217	1
Amp_11q13.3	Del_4q22.1	0.217	1
ARID1A	STAG2	0.218	1
CDKN1A	Amp_7p11.2	0.218	1
CSMD3	11q-Del	0.218	1
CSMD3	Del_19p13.3	0.218	1
HORMAD1	FAT1	0.218	1
NF2	20q-Amp	0.218	1
NF2	Del_11q23.3	0.218	1
ZBTB7B	20q-Amp	0.218	1
ZBTB7B	Del_11q23.3	0.218	1
ZFP36L1	Del_4q34.2	0.218	1
FAT1	CNOT3	0.218	1
FAT1	Amp_6q21	0.218	1
MARK2	Amp_20q11.21	0.218	1
STK32B	Del_11q23.3	0.218	1
UBA52	Del_11p15.5	0.218	1
HLA-A	Del_11p15.5	0.218	1
ZNF773	Del_11q23.3	0.218	1
Amp_6q21	Del_11q23.3	0.218	1
Amp_10p14	Amp_12q15	0.218	1
CFHR4	Del_8p21.3	0.219	1
FBXW7	RHOA	0.219	1
FGFR3	Amp_1q21.3	0.219	1
HIST1H3B	Del_3p14.2	0.219	1
METTL3	Amp_16p13.2	0.219	1
RHOA	ATAD5	0.219	1
RHOA	Amp_16p13.2	0.219	1
ASXL1	Del_9p21.3	0.219	1
CDKN2A	Amp_1q23.3	0.22	1
FBXW7	Del_13q14.2	0.22	1
HRAS	Del_8p21.3	0.22	1
NAA15	Del_4q22.1	0.22	1
RARG	Del_4q22.1	0.22	1
TAF11	Amp_10p14	0.22	1
UGP2	Del_18q23	0.22	1
NF1	8p-Del	0.221	1
RXRA	Amp_1q21.3	0.221	1
MYO16	Amp_1q21.3	0.221	1
PARD3	Amp_17q23.3	0.221	1
17p-Del	Amp_22q12.2	0.221	1
NFE2L2	SPTAN1	0.222	1
NFE2L2	Amp_7p11.2	0.222	1
RXRA	Amp_7p11.2	0.222	1
ARID1B	8p-Del	0.222	1
SPTAN1	16p-Del	0.222	1
9q-Del	Amp_3p25.2	0.222	1
HIST1H3B	Amp_8q22.3	0.223	1
MIPOL1	Amp_11q13.3	0.223	1
SF1	Amp_11q13.3	0.223	1
ZNF511	Del_10q23.31	0.223	1
TFG	Amp_11q13.3	0.223	1
GNA13	Amp_8q22.3	0.223	1
CFHR4	20p-Amp	0.224	1
DIAPH2	Del_11q23.3	0.224	1
KLF5	16p-Del	0.224	1
NFE2L3	Del_9p21.3	0.224	1
PIK3CA	DAZAP1	0.224	1
TSC1	6q-Del	0.224	1
ZFP36L1	Amp_4p16.3	0.224	1
ARID2	OGDH	0.224	1
ARID2	Amp_4p16.3	0.224	1
CASP8	Del_9p21.3	0.224	1
EXOSC10	Del_9p21.3	0.224	1
ITGA4	Del_5q12.1	0.224	1
PARD3	Amp_11q22.2	0.224	1
PPARG	Del_22q13.32	0.224	1
PPARGC1A	9q-Del	0.224	1
SF3B3	20q-Amp	0.224	1
TXNIP	9q-Del	0.224	1
WAC	Del_9p21.3	0.224	1
ARID1B	16p-Del	0.224	1
ARID1B	22q-Del	0.224	1
CNOT1	20q-Amp	0.224	1
7p-Amp	16p-Del	0.224	1
ARID1A	Del_18q23	0.225	1
ATM	Amp_3q26.33	0.225	1
CTNNB1	18q-Del	0.225	1
ELF3	Amp_12q15	0.225	1
EP300	Amp_3q26.33	0.225	1
FBXW7	Amp_19q13.43	0.225	1
FOXA1	Del_14q24.1	0.225	1
KRAS	18q-Del	0.225	1
KRAS	Del_14q24.1	0.225	1
NFE2L3	Del_14q24.1	0.225	1
PTEN	18q-Del	0.225	1
RUNX1	18q-Del	0.225	1
TGIF2LX	8p-Del	0.225	1
ATAD5	Amp_19q13.43	0.225	1
CASP8	18q-Del	0.225	1
CASP8	Del_14q24.1	0.225	1
CDK12	18q-Del	0.225	1
EXOSC10	18q-Del	0.225	1
PHLDA3	8p-Del	0.225	1
BAP1	18q-Del	0.225	1
EPS8	18q-Del	0.225	1
EPS8	Del_14q24.1	0.225	1
1q-Amp	18q-Del	0.225	1
1q-Amp	Del_14q24.1	0.225	1
CDKN1A	NF1	0.226	1
NF2	Amp_8p11.21	0.226	1
NF2	Del_2q22.1	0.226	1
NFE2L2	5p-Amp	0.226	1
SF3B1	5p-Amp	0.226	1
MED13	Amp_8p11.21	0.226	1
MYO16	5p-Amp	0.226	1
CNOT3	Del_2q22.1	0.226	1
Amp_6q21	Del_2q22.1	0.226	1
Amp_7p21.1	Del_9p23	0.226	1
GTF2I	Amp_19q13.43	0.227	1
STAG2	Del_2q34	0.227	1
STAG2	Del_8p23.3	0.227	1
TP53	Amp_17q23.3	0.227	1
ZFP36L2	11p-Del	0.227	1
ZFP36L2	17p-Del	0.227	1
PPARGC1A	Amp_19q13.43	0.227	1
RIPK4	11p-Del	0.227	1
SSH3	Amp_19q13.43	0.227	1
CUL1	11p-Del	0.227	1
CUL1	17p-Del	0.227	1
FGFR3	CDK12	0.228	1
HRAS	10q-Del	0.228	1
HRAS	6q-Del	0.228	1
HRAS	Del_15q13.1	0.228	1
ZFP36L2	6q-Del	0.228	1
RIPK4	6q-Del	0.228	1
ASXL2	19q-Amp	0.229	1
ASXL2	Del_7q36.3	0.229	1
TP53	NEK11	0.229	1
TP53	HLA-A	0.229	1
DDX3X	Amp_17q12	0.229	1
NDC80	Amp_17q12	0.229	1
NFE2L3	Del_2q37.1	0.23	1
PIK3CA	Amp_1q21.3	0.23	1
CASP8	Del_2q37.1	0.23	1
Amp_17q12	Del_22q13.32	0.23	1
C12orf43	9q-Del	0.231	1
C12orf43	Amp_8q22.3	0.231	1
FGFR3	Del_19p13.3	0.231	1
HIST1H2AG	Del_5q12.1	0.231	1
KDM6A	PARD3	0.231	1
NF1	RHOA	0.231	1
CCNE2	9q-Del	0.231	1
IL10RB	9q-Del	0.231	1
LETMD1	9q-Del	0.231	1
PHLDA3	Amp_8q22.3	0.231	1
SNRPB	Del_5q12.1	0.231	1
TAF11	9q-Del	0.231	1
CFHR4	ERBB3	0.232	1
ERBB3	PROS1	0.232	1
ERBB3	CTCF	0.232	1
ERBB3	DPYS	0.232	1
ERBB3	MBD1	0.232	1
ERBB3	USP28	0.232	1
KLF5	Del_5q12.1	0.232	1
NEK11	Del_13q14.2	0.232	1
ASXL1	Del_6q27	0.232	1
ASXL1	Del_11q25	0.232	1
CREBBP	6q-Del	0.233	1
FGFR3	8p-Del	0.233	1
NF2	Amp_19q12	0.233	1
NRAS	Del_2q37.1	0.233	1
ZBTB7B	Amp_19q12	0.233	1
ZBTB47	Del_2q37.1	0.233	1
11q-Del	Del_16q23.1	0.233	1
Amp_12q15	Del_19p13.3	0.233	1
ERCC2	GPR50	0.234	1
ERCC2	KRAS	0.234	1
ERCC2	Del_1p36.11	0.234	1
HIST1H3B	SPTAN1	0.234	1
HIST1H3B	Amp_7p11.2	0.234	1
NFE2L2	Amp_13q22.1	0.234	1
EPHA2	Amp_3q26.33	0.234	1
HFM1	Amp_11q13.3	0.234	1
KDM5A	Amp_11q13.3	0.234	1
NCOA1	Amp_11q13.3	0.234	1
SF3B3	Del_2q22.1	0.234	1
TRERF1	Amp_8p11.21	0.234	1
CNOT1	Del_2q22.1	0.234	1
GNA13	Amp_7p11.2	0.234	1
OGDH	Amp_3q26.33	0.234	1
22q-Del	Amp_12q15	0.234	1
Amp_4p16.3	Del_10q23.31	0.234	1
Amp_7p11.2	Del_1q32.1	0.234	1
C3orf70	8q-Amp	0.235	1
HRAS	Del_18q23	0.235	1
ZFP36L2	Del_18q23	0.235	1
RIPK4	Del_18q23	0.235	1
UGP2	Amp_1q23.3	0.235	1
ZNF626	8q-Amp	0.235	1
Amp_1p34.2	Amp_10p14	0.235	1
TP53	ATAD5	0.236	1
SPTAN1	Amp_19q13.43	0.236	1
CFHR4	Del_8p23.3	0.237	1
RB1	Amp_19q13.43	0.237	1
CTCF	Del_8p23.3	0.237	1
SCARF2	Del_13q14.2	0.237	1
ARID1A	RPTN	0.238	1
ARID1A	NDC80	0.238	1
ARID1A	19q-Amp	0.238	1
ARID1A	Del_7q36.3	0.238	1
ERCC2	4p-Del	0.238	1
Amp_4q13.3	Amp_5p15.33	0.238	1
ARID1A	DLX6	0.239	1
C3orf70	PIK3CA	0.239	1
CDKN1A	RPTN	0.239	1
CDKN1A	Amp_4q13.3	0.239	1
CFHR4	Amp_3p25.2	0.239	1
EP300	Del_14q24.1	0.239	1
FBXW7	ZFP36L2	0.239	1
FBXW7	CUL1	0.239	1
HRAS	Amp_16p13.2	0.239	1
KLF5	4q-Del	0.239	1
NFE2L2	ASXL1	0.239	1
PKHD1	RIPK4	0.239	1
PKHD1	ZNF626	0.239	1
PKHD1	CUL1	0.239	1
RPTN	Del_19p13.3	0.239	1
SF3B1	Del_12p13.1	0.239	1
ZFP36L2	Amp_16p13.2	0.239	1
ZNF180	5q-Del	0.239	1
ZNF180	Del_19p13.3	0.239	1
DDX3X	11q-Del	0.239	1
MBD1	Amp_3p25.2	0.239	1
MYO16	Del_12p13.1	0.239	1
RARG	11q-Del	0.239	1
RIPK4	Amp_16p13.2	0.239	1
SLC9A4	Amp_16p13.2	0.239	1
ASXL1	Amp_11q22.2	0.239	1
FUT5	Amp_5p15.33	0.239	1
ZNF185	Amp_5p15.33	0.239	1
3p-Amp	Amp_16p13.2	0.239	1
11q-Del	Amp_4q13.3	0.239	1
11q-Del	Del_7q36.3	0.239	1
FBXW7	TSC1	0.24	1
KDM6A	4p-Del	0.24	1
TSC1	Amp_16p13.2	0.24	1
MYO16	Amp_20q11.21	0.24	1
NCOA1	Del_9p21.3	0.24	1
NDC80	Amp_10p14	0.24	1
OGDH	Del_9p21.3	0.24	1
Amp_8q22.3	Del_11q25	0.24	1
DIAPH2	Amp_22q12.2	0.241	1
GPR50	KDM6A	0.241	1
NF1	Amp_19q13.43	0.241	1
NF2	Del_11q25	0.241	1
RB1	CNOT1	0.241	1
TBC1D12	PSMC6	0.241	1
ZBTB7B	Del_11q25	0.241	1
HSP90AA1	Amp_10p14	0.241	1
RIPK4	Del_8p23.3	0.241	1
SF3B3	Amp_22q12.2	0.241	1
SLC9A4	Del_8p23.3	0.241	1
STK32B	Del_11q25	0.241	1
TRERF1	Amp_22q12.2	0.241	1
CNOT1	Amp_22q12.2	0.241	1
CNOT3	Del_6q27	0.241	1
CNOT3	Del_11q25	0.241	1
ZNF773	Del_6q27	0.241	1
ZNF773	Del_11q25	0.241	1
Amp_6q21	Del_11q25	0.241	1
METTL3	TP53	0.242	1
NCOA1	Amp_8q22.3	0.242	1
RBP2	Amp_1q21.3	0.242	1
ERCC2	18q-Del	0.243	1
FGFR3	SHANK1	0.243	1
METTL3	Amp_1p34.2	0.243	1
NHLRC1	5p-Amp	0.243	1
RHOA	STAG2	0.243	1
RHOA	ARID2	0.243	1
RHOA	Amp_1p34.2	0.243	1
RHOA	Del_16p13.3	0.243	1
SHANK1	STAG2	0.243	1
TP53	TSC1	0.243	1
LETMD1	5p-Amp	0.243	1
GNA13	Del_16q23.1	0.243	1
ATM	17p-Del	0.244	1
ATM	Amp_4p16.3	0.244	1
CREBBP	ERBB3	0.244	1
EP300	8q-Amp	0.244	1
KLF5	Amp_7p11.2	0.244	1
PKHD1	Del_11p15.5	0.244	1
ATAD5	Del_11p15.5	0.244	1
PARD3	SPTAN1	0.244	1
SPTAN1	7p-Amp	0.244	1
8q-Amp	17p-Del	0.244	1
5q-Del	Amp_1p34.2	0.244	1
Amp_1p34.2	Del_19p13.3	0.244	1
CDKN2A	RBM26	0.245	1
DIAPH2	Amp_19q12	0.245	1
ERBB2	RBM10	0.245	1
ERBB2	SF3B3	0.245	1
FAM47C	Amp_19q12	0.245	1
Amp_8p11.23	Del_11q23.3	0.245	1
ARID1A	TSC1	0.246	1
CFHR4	Del_11p15.5	0.246	1
FGFR3	IDH1	0.246	1
FGFR3	POTEG	0.246	1
FGFR3	SARNP	0.246	1
FGFR3	OR10Z1	0.246	1
HORMAD1	Del_9p21.3	0.246	1
MIPOL1	Amp_5p15.33	0.246	1
NFE2L2	20p-Amp	0.246	1
SARNP	Del_16p13.3	0.246	1
STAG2	FUS	0.246	1
ZFP36L1	8p-Del	0.246	1
MARK2	Del_11p15.5	0.246	1
MYO16	20p-Amp	0.246	1
STK32B	Del_9p21.3	0.246	1
USP28	Del_11p15.5	0.246	1
3q-Amp	Amp_17q23.3	0.246	1
6q-Del	Amp_17q23.3	0.246	1
9q-Del	Del_6p25.3	0.246	1
EP300	RXRA	0.247	1
KDM6A	ATAD5	0.247	1
DAZAP1	Amp_6p22.3	0.247	1
ARID1A	Amp_11q22.2	0.248	1
CDKN1A	20p-Amp	0.248	1
STAG2	TP53	0.248	1
DENND5B	Del_11q23.3	0.248	1
FAT1	RBM26	0.248	1
FAT1	7q-Amp	0.248	1
FAT1	15q-Del	0.248	1
NAA15	8p-Del	0.248	1
RBM26	20q-Amp	0.248	1
7q-Amp	Del_11q23.3	0.248	1
ELF3	NF2	0.249	1
GTF2I	6q-Del	0.249	1
NF2	Amp_17q23.3	0.249	1
NF2	Del_3p14.2	0.249	1
RB1	GLTP	0.249	1
RB1	HLA-A	0.249	1
STAG2	Amp_20q11.21	0.249	1
ZBTB7B	Amp_17q23.3	0.249	1
ZBTB7B	Del_3p14.2	0.249	1
EPHA2	14q-Del	0.249	1
PPARGC1A	6q-Del	0.249	1
PSMC6	Del_3p14.2	0.249	1
SSH3	10q-Del	0.249	1
SSH3	6q-Del	0.249	1
UBA52	9p-Del	0.249	1
CNOT3	Amp_17q23.3	0.249	1
CNOT3	Del_3p14.2	0.249	1
DNAH6	3q-Amp	0.249	1
OGDH	4p-Del	0.249	1
UNC93B1	9p-Del	0.249	1
22q-Del	Del_9p21.3	0.249	1
4p-Del	Amp_4p16.3	0.249	1
CFHR4	Del_14q24.1	0.25	1
TP53	11q-Del	0.25	1
CTCF	18q-Del	0.25	1
MARK2	18q-Del	0.25	1
MBD1	18q-Del	0.25	1
CDKN2A	FGFR3	0.251	1
CNNM4	20q-Amp	0.251	1
CREBBP	20q-Amp	0.251	1
MIPOL1	Del_11q23.3	0.251	1
NF1	ACTB	0.251	1
SF1	FAT1	0.251	1
SF1	20q-Amp	0.251	1
ZBTB7B	Del_9p23	0.251	1
ZNF511	20q-Amp	0.251	1
ZNF511	Del_11q23.3	0.251	1
FAT1	Del_8p21.3	0.251	1
HFM1	Del_11p15.5	0.251	1
NKX2-2	Del_11q23.3	0.251	1
PSMC6	Del_9p23	0.251	1
STK32B	Del_9p23	0.251	1
GNA13	20p-Amp	0.251	1
OGDH	Del_11p15.5	0.251	1
TMCO4	Del_22q13.32	0.251	1
ZNF773	Del_9p23	0.251	1
14q-Del	Amp_11q13.3	0.251	1
CTNNB1	RB1	0.252	1
CTNNB1	9p-Del	0.252	1
ELF3	Del_2q34	0.252	1
FOXQ1	RB1	0.252	1
KDM6A	5q-Del	0.252	1
KRAS	9p-Del	0.252	1
PLCXD3	Amp_20q11.21	0.252	1
PTEN	9p-Del	0.252	1
RB1	EPS8	0.252	1
RB1	Del_1p36.11	0.252	1
RUNX1	9p-Del	0.252	1
AGR3	Amp_20q11.21	0.252	1
RBP2	Amp_20q11.21	0.252	1
ASXL2	THRAP3	0.253	1
ASXL2	Del_1p36.11	0.253	1
CREBBP	Amp_16p13.2	0.253	1
GPR50	Amp_17q12	0.253	1
KLF5	5p-Amp	0.253	1
KLF5	Amp_1q21.3	0.253	1
ATAD5	Del_11q25	0.253	1
FAT1	Amp_8q22.3	0.253	1
IKZF2	Amp_17q12	0.253	1
MED13	Del_11q25	0.253	1
EP300	SNRPB	0.255	1
EP300	SCARF2	0.255	1
ERCC2	FAT1	0.255	1
ERCC2	20q-Amp	0.255	1
TBC1D12	Amp_3p25.2	0.255	1
CCNE2	11p-Del	0.255	1
CDK12	9p-Del	0.255	1
IL10RB	11p-Del	0.255	1
LETMD1	11p-Del	0.255	1
TAF11	11p-Del	0.255	1
TAF11	17p-Del	0.255	1
SCARF2	11p-Del	0.255	1
CREBBP	FAM47C	0.256	1
DIAPH2	RXRA	0.256	1
DIAPH2	Amp_7p21.1	0.256	1
DIAPH2	Amp_11q22.2	0.256	1
DIAPH2	Del_6q27	0.256	1
DIAPH2	Del_11q25	0.256	1
FBXW7	10q-Del	0.256	1
HRAS	Amp_1q23.3	0.256	1
KLF5	Del_16q23.1	0.256	1
NFE2L2	CPD	0.256	1
NFE2L2	RBM10	0.256	1
NFE2L2	SF3B3	0.256	1
PIGS	TP53	0.256	1
PIK3CA	10q-Del	0.256	1
PKHD1	10q-Del	0.256	1
RXRA	FAM47C	0.256	1
ACTB	Amp_1q23.3	0.256	1
CPD	22q-Del	0.256	1
CPD	Amp_7p21.1	0.256	1
CPD	Del_11q25	0.256	1
MED13	6q-Del	0.256	1
SF3B3	16p-Del	0.256	1
SF3B3	Amp_7p21.1	0.256	1
TRERF1	22q-Del	0.256	1
CNOT1	16p-Del	0.256	1
CUL1	Amp_1q23.3	0.256	1
4q-Del	Del_6p25.3	0.256	1
ATM	Amp_7p11.2	0.257	1
PKHD1	11p-Del	0.257	1
ZNF180	9q-Del	0.257	1
ZNF180	Del_5q12.1	0.257	1
DDX3X	9q-Del	0.257	1
NAA15	Del_5q12.1	0.257	1
CDKN1A	Del_10q23.31	0.258	1
DIAPH2	Amp_1q23.3	0.258	1
SF3B1	8q-Amp	0.258	1
ZFP36L1	Del_5q12.1	0.258	1
ARID2	9q-Del	0.258	1
ARID2	Del_5q12.1	0.258	1
MYO16	8q-Amp	0.258	1
PPARGC1A	17p-Del	0.258	1
DNAH6	11p-Del	0.258	1
DNAH6	17p-Del	0.258	1
9q-Del	Amp_1p34.2	0.258	1
Amp_11q13.3	Del_19p13.3	0.258	1
ERBB3	NFE2L2	0.259	1
ERBB3	Amp_11q22.2	0.259	1
PSIP1	Amp_22q12.2	0.259	1
SF1	Del_2q22.1	0.259	1
ARID2	Amp_19q13.43	0.259	1
DENND5B	Del_2q22.1	0.259	1
RBM26	Amp_22q12.2	0.259	1
7q-Amp	Del_8p21.3	0.259	1
ARID1A	FAT1	0.26	1
ERCC2	USP28	0.26	1
FBXW7	DNAH6	0.26	1
PIGS	Amp_3q26.33	0.26	1
PIGS	Amp_11q13.3	0.26	1
POTEG	Amp_3q26.33	0.26	1
ZNF486	Amp_11q13.3	0.26	1
OR10Z1	Amp_3q26.33	0.26	1
SSH3	Amp_16p13.2	0.26	1
UGP2	Amp_11q13.3	0.26	1
Amp_17q12	Del_9p23	0.26	1
C12orf43	8q-Amp	0.261	1
HIST1H2AG	Del_18q23	0.261	1
TSC1	DDX3X	0.261	1
TSC1	Del_7q36.3	0.261	1
IL10RB	Del_18q23	0.261	1
TAF11	8q-Amp	0.261	1
TAF11	Del_18q23	0.261	1
Amp_13q22.1	Del_10q23.31	0.261	1
KLF5	Amp_6p22.3	0.262	1
METTL3	Amp_3q26.33	0.262	1
RHOA	Del_10q23.31	0.262	1
SHANK1	Amp_3q26.33	0.262	1
SHANK1	Amp_11q13.3	0.262	1
ARID2	Del_17p12	0.262	1
ATM	4p-Del	0.263	1
C3orf70	ZFP36L1	0.263	1
CDKN1A	ERBB3	0.263	1
CDKN2A	HFM1	0.263	1
HRAS	Amp_1p34.2	0.263	1
RHOB	HFM1	0.263	1
RHOB	OGDH	0.263	1
ZFP36L1	RIPK4	0.263	1
ZFP36L1	SLC9A4	0.263	1
ZFP36L1	3p-Amp	0.263	1
ARID2	CUL1	0.263	1
ITGA4	Del_9p23	0.263	1
PPARGC1A	Del_9p23	0.263	1
ZNF626	Amp_1p34.2	0.263	1
DNAH6	Del_9p23	0.263	1
ARID1A	Del_9p23	0.264	1
CDKN1A	KRAS	0.264	1
CDKN1A	NFE2L3	0.264	1
CDKN1A	DCDC1	0.264	1
CDKN1A	EXOSC10	0.264	1
CDKN1A	THRAP3	0.264	1
CDKN1A	WAC	0.264	1
CDKN1A	ZNF750	0.264	1
CDKN1A	BAP1	0.264	1
CDKN1A	CDH1	0.264	1
CDKN1A	Del_1p36.11	0.264	1
CTNNB1	5q-Del	0.264	1
CTNNB1	Del_19p13.3	0.264	1
FOXQ1	11q-Del	0.264	1
FOXQ1	5q-Del	0.264	1
FOXQ1	Del_19p13.3	0.264	1
GPR50	Del_19p13.3	0.264	1
KDM6A	5p-Amp	0.264	1
KRAS	11q-Del	0.264	1
KRAS	Del_19p13.3	0.264	1
PTEN	11q-Del	0.264	1
STAG2	Amp_8p11.21	0.264	1
STAG2	Del_2q22.1	0.264	1
CASP8	11q-Del	0.264	1
CASP8	5q-Del	0.264	1
CASP8	Del_19p13.3	0.264	1
DCDC1	11q-Del	0.264	1
NKX2-2	Del_17p12	0.264	1
THRAP3	11q-Del	0.264	1
ZNF750	11q-Del	0.264	1
CDH1	11q-Del	0.264	1
EPS8	11q-Del	0.264	1
EPS8	5q-Del	0.264	1
1q-Amp	Del_19p13.3	0.264	1
Amp_5p15.33	Del_9p23	0.264	1
CSMD3	Amp_22q12.2	0.265	1
ZBTB7B	SPTAN1	0.265	1
STK32B	Amp_7p11.2	0.265	1
DIAPH2	Del_9p23	0.266	1
ERBB2	18q-Del	0.266	1
ZNF511	Amp_19q12	0.266	1
TRERF1	Del_9p23	0.266	1
ZBTB47	Amp_10p14	0.266	1
HLA-A	Amp_10p14	0.266	1
UNC93B1	Amp_10p14	0.266	1
GTF2I	8q-Amp	0.267	1
POTEG	Del_4q34.2	0.267	1
FAT1	Amp_20q11.21	0.267	1
NEK11	8q-Amp	0.267	1
RBP2	Amp_3p25.2	0.267	1
DNAH6	Del_18q23	0.267	1
ARID1A	Del_10q23.31	0.268	1
DIAPH2	Del_3p14.2	0.268	1
ELF3	FAM47C	0.268	1
KDM6A	SARNP	0.268	1
DPYS	Del_2q37.1	0.268	1
RBM10	Amp_17q23.3	0.268	1
TRERF1	Del_3p14.2	0.268	1
FAM47C	Amp_17q23.3	0.268	1
RHOA	14q-Del	0.269	1
ZFP36L1	Del_2q22.1	0.269	1
ATAD5	8q-Amp	0.269	1
PARD3	20p-Amp	0.269	1
ERBB2	RBM26	0.27	1
MARK2	Del_4q22.1	0.27	1
MBD1	Del_4q22.1	0.27	1
PPARG	Del_4q22.1	0.27	1
C12orf43	Del_9p21.3	0.271	1
DIAPH2	KLF5	0.271	1
DIAPH2	7p-Amp	0.271	1
DIAPH2	4q-Del	0.271	1
HIST1H2AG	Del_8p21.3	0.271	1
HIST1H2AG	Del_9p21.3	0.271	1
KLF5	RBM10	0.271	1
PIK3CA	Amp_20q11.21	0.271	1
TGIF2LX	Del_9p21.3	0.271	1
TSC1	Amp_13q22.1	0.271	1
CPD	7p-Amp	0.271	1
CPD	Amp_10p14	0.271	1
IL10RB	Del_9p21.3	0.271	1
LETMD1	Del_9p21.3	0.271	1
SF3B3	Amp_10p14	0.271	1
SNRPB	Del_9p21.3	0.271	1
TAF11	Del_8p21.3	0.271	1
TAF11	Del_9p21.3	0.271	1
TRERF1	ARID1B	0.271	1
CNOT1	4q-Del	0.271	1
FAM47C	4q-Del	0.271	1
SPTAN1	Amp_6p22.3	0.271	1
Amp_10p14	Del_11q25	0.271	1
FGFR3	ZNF626	0.272	1
FGFR3	3p-Amp	0.272	1
HRAS	Amp_1q21.3	0.272	1
STAG2	ACTB	0.272	1
ZNF180	3q-Amp	0.272	1
DDX3X	Del_15q13.1	0.272	1
NDC80	3q-Amp	0.272	1
PARD3	Amp_20q11.21	0.272	1
RARG	10q-Del	0.272	1
RIPK4	Del_16p13.3	0.272	1
SLC9A4	Amp_1q21.3	0.272	1
SLC9A4	Del_16p13.3	0.272	1
3q-Amp	Amp_4q13.3	0.272	1
ATM	CDKN1A	0.273	1
ATM	11q-Del	0.273	1
NF1	10q-Del	0.273	1
NF1	Del_11p15.5	0.273	1
RB1	7q-Amp	0.273	1
TSC1	Amp_1q21.3	0.273	1
CREBBP	SF1	0.274	1
CREBBP	NKX2-2	0.274	1
MIPOL1	Del_6q27	0.274	1
MIPOL1	Del_11q25	0.274	1
NF2	Amp_12q15	0.274	1
NFE2L2	PSIP1	0.274	1
NFE2L2	RBM26	0.274	1
SF1	Del_11q25	0.274	1
SF3B1	7q-Amp	0.274	1
TBC1D12	ZNF511	0.274	1
ZBTB7B	Amp_12q15	0.274	1
ZNF511	Del_6q27	0.274	1
ZNF511	Del_11q25	0.274	1
DENND5B	16p-Del	0.274	1
NKX2-2	Del_11q25	0.274	1
PSMC6	Amp_12q15	0.274	1
SF3B3	Del_9p21.3	0.274	1
TRERF1	Del_9p21.3	0.274	1
ZNF773	Amp_12q15	0.274	1
ZNF773	Del_6p25.3	0.274	1
EP300	KLF5	0.275	1
KLF5	11p-Del	0.275	1
PTEN	Amp_19q13.43	0.275	1
CASP8	Amp_19q13.43	0.275	1
ZNF750	Amp_19q13.43	0.275	1
OGDH	Del_11q23.3	0.275	1
FGFR3	Amp_8p11.23	0.276	1
5p-Amp	Amp_12q15	0.276	1
5p-Amp	Del_6p25.3	0.276	1
Amp_6p22.3	Del_2q22.1	0.276	1
Amp_11q22.2	Del_17p12	0.276	1
Amp_13q22.1	Del_16q23.1	0.276	1
ATM	Del_6p25.3	0.277	1
STAG2	Amp_22q12.2	0.277	1
TP53	CNOT3	0.277	1
IKZF2	Amp_10p14	0.277	1
THRAP3	Amp_10p14	0.277	1
CDH1	Amp_10p14	0.277	1
Amp_10p14	Del_1p36.11	0.277	1
Amp_12q15	Del_4q34.2	0.277	1
NRAS	9q-Del	0.278	1
TP53	Del_11p15.5	0.278	1
UBA52	9q-Del	0.278	1
HLA-A	Del_5q12.1	0.278	1
UNC93B1	9q-Del	0.278	1
ZNF185	Del_9p23	0.278	1
ARID1A	10q-Del	0.279	1
EP300	9q-Del	0.279	1
NFE2L2	Del_8p23.3	0.279	1
PIK3CA	Amp_17q23.3	0.279	1
MYO16	Del_8p23.3	0.279	1
ASXL1	Del_6p25.3	0.279	1
18q-Del	Del_1q32.1	0.279	1
ASXL2	MBD1	0.28	1
ASXL2	Del_Xp11.3	0.28	1
CFHR4	Amp_17q12	0.28	1
PROS1	Amp_17q12	0.28	1
CTCF	Amp_17q12	0.28	1
MBD1	Amp_17q12	0.28	1
CDKN1A	14q-Del	0.281	1
CSMD3	PHLDA3	0.281	1
CSMD3	TAF11	0.281	1
IDH1	Del_2q34	0.281	1
PIK3CA	RB1	0.281	1
ZNF486	Del_2q34	0.281	1
CDK12	11q-Del	0.281	1
MYO16	Del_11p15.5	0.281	1
CNOT3	Amp_8q22.3	0.281	1
CUL1	Amp_6p22.3	0.281	1
FUS	Del_2q34	0.281	1
ZNF773	Amp_8q22.3	0.281	1
9q-Del	Amp_19q12	0.281	1
Amp_17q12	Del_2q34	0.281	1
CREBBP	PSIP1	0.282	1
ERBB3	4q-Del	0.282	1
NF1	11p-Del	0.282	1
TBC1D12	7q-Amp	0.282	1
RBM26	Del_6q27	0.282	1
7q-Amp	Del_11q25	0.282	1
Amp_11q13.3	Del_22q13.32	0.282	1
ELF3	TFG	0.283	1
NF2	20p-Amp	0.283	1
RHOA	RHOB	0.283	1
ZBTB7B	20p-Amp	0.283	1
ZBTB7B	Del_22q13.32	0.283	1
ZFP36L1	5p-Amp	0.283	1
PSMC6	20p-Amp	0.283	1
PSMC6	Del_22q13.32	0.283	1
ZNF773	Del_22q13.32	0.283	1
ERBB2	Del_16p13.3	0.284	1
FBXW7	NDC80	0.284	1
FBXW7	19q-Amp	0.284	1
FGFR3	Amp_19q12	0.284	1
FOXA1	Amp_5p15.33	0.284	1
NFE2L3	Amp_5p15.33	0.284	1
NRAS	Del_13q14.2	0.284	1
PKHD1	ZNF180	0.284	1
PKHD1	NDC80	0.284	1
ATAD5	NDC80	0.284	1
ATAD5	19q-Amp	0.284	1
ATAD5	Del_7q36.3	0.284	1
CASP8	Amp_5p15.33	0.284	1
EXOSC10	Amp_5p15.33	0.284	1
MED13	19q-Amp	0.284	1
NDC80	Amp_16p13.2	0.284	1
BAP1	Amp_5p15.33	0.284	1
HLA-A	Del_13q14.2	0.284	1
19q-Amp	Amp_16p13.2	0.284	1
1q-Amp	Amp_5p15.33	0.284	1
CSMD3	10q-Del	0.285	1
CSMD3	Del_15q13.1	0.285	1
CTNNB1	8p-Del	0.285	1
FGFR3	5p-Amp	0.285	1
KRAS	8p-Del	0.285	1
NFE2L3	8p-Del	0.285	1
PIK3CA	Amp_17q12	0.285	1
ZFP36L1	PPARGC1A	0.285	1
ZFP36L1	SSH3	0.285	1
ARID2	SSH3	0.285	1
DCDC1	8p-Del	0.285	1
ZNF750	8p-Del	0.285	1
17p-Del	Amp_7p11.2	0.285	1
ASXL2	CDKN2A	0.286	1
ASXL2	RHOB	0.286	1
CTNNB1	TSC1	0.286	1
GPR50	TSC1	0.286	1
NFE2L2	18q-Del	0.286	1
NFE2L3	TSC1	0.286	1
TSC1	BAP1	0.286	1
TSC1	CDH1	0.286	1
TSC1	EPS8	0.286	1
TSC1	Del_1p36.11	0.286	1
PARD3	8q-Amp	0.286	1
ARID1B	8q-Amp	0.286	1
ARID1B	Del_18q23	0.286	1
8q-Amp	4q-Del	0.286	1
ERBB2	Del_6q27	0.287	1
ERBB2	Del_11q25	0.287	1
HIST1H2AG	Del_8p23.3	0.287	1
NHLRC1	Del_8p23.3	0.287	1
TGIF2LX	Del_8p23.3	0.287	1
TSC1	20p-Amp	0.287	1
CCNE2	Del_8p23.3	0.287	1
EPHA2	Del_2q22.1	0.287	1
KDM5A	Del_2q22.1	0.287	1
NCOA1	Amp_8p11.21	0.287	1
OGDH	Amp_8p11.21	0.287	1
BTG2	FGFR3	0.288	1
C12orf43	Amp_8p11.23	0.288	1
C12orf43	Del_16p13.3	0.288	1
CSMD3	Del_6q27	0.288	1
CSMD3	Del_11q25	0.288	1
DIAPH2	ASXL1	0.288	1
DIAPH2	Del_12p13.1	0.288	1
FGFR3	CCNE2	0.288	1
FGFR3	IL10RB	0.288	1
FGFR3	LETMD1	0.288	1
FGFR3	TAF11	0.288	1
HIST1H2AG	STAG2	0.288	1
NHLRC1	STAG2	0.288	1
NHLRC1	Amp_8p11.23	0.288	1
NHLRC1	Del_16p13.3	0.288	1
PIK3CA	DLX6	0.288	1
STAG2	TAF11	0.288	1
TGIF2LX	Amp_8p11.23	0.288	1
CCNE2	Del_16p13.3	0.288	1
LETMD1	Amp_8p11.23	0.288	1
RBM10	Del_12p13.1	0.288	1
RBP2	Del_2q37.1	0.288	1
SF3B3	Del_12p13.1	0.288	1
SNRPB	Del_16p13.3	0.288	1
TRERF1	Del_12p13.1	0.288	1
ASXL1	FAM47C	0.288	1
CNOT1	Del_12p13.1	0.288	1
FAM47C	Del_12p13.1	0.288	1
ATM	RHOB	0.289	1
HRAS	14q-Del	0.289	1
KLF5	DENND5B	0.289	1
KLF5	15q-Del	0.289	1
PSIP1	7p-Amp	0.289	1
SARNP	FAT1	0.289	1
SARNP	Del_11q23.3	0.289	1
STAG2	Del_8p21.3	0.289	1
ZFP36L2	14q-Del	0.289	1
ACTB	CDK12	0.289	1
ACTB	14q-Del	0.289	1
ACTB	4p-Del	0.289	1
CDK12	3p-Amp	0.289	1
DENND5B	PARD3	0.289	1
FAT1	UGP2	0.289	1
OR10Z1	Del_11q23.3	0.289	1
PARD3	15q-Del	0.289	1
SSH3	Del_8p23.3	0.289	1
UGP2	20q-Amp	0.289	1
ZNF626	4p-Del	0.289	1
CUL1	4p-Del	0.289	1
3p-Amp	4p-Del	0.289	1
7p-Amp	15q-Del	0.289	1
KDM6A	Del_22q13.32	0.29	1
NF1	PKHD1	0.29	1
NRAS	5p-Amp	0.29	1
UBA52	5p-Amp	0.29	1
HLA-A	5p-Amp	0.29	1
Del_9p23	Del_10q23.31	0.29	1
CDKN1A	CTCF	0.291	1
CFHR4	11q-Del	0.291	1
CFHR4	5q-Del	0.291	1
CFHR4	Del_19p13.3	0.291	1
PROS1	5q-Del	0.291	1
PROS1	Del_19p13.3	0.291	1
ZFP36L1	3q-Amp	0.291	1
ARID2	10q-Del	0.291	1
CTCF	11q-Del	0.291	1
CTCF	Del_19p13.3	0.291	1
KDM5A	Del_17p12	0.291	1
MARK2	11q-Del	0.291	1
NCOA1	Del_17p12	0.291	1
PPARG	11q-Del	0.291	1
PPP4R1	11q-Del	0.291	1
OGDH	Del_17p12	0.291	1
10q-Del	Amp_12q15	0.291	1
10q-Del	Amp_13q22.1	0.291	1
6q-Del	Amp_1p34.2	0.291	1
9q-Del	Amp_3q26.33	0.291	1
Del_1q32.1	Del_8p23.3	0.291	1
CFHR4	9p-Del	0.292	1
DIAPH2	SPTAN1	0.292	1
EP300	19q-Amp	0.292	1
ERBB3	NF2	0.292	1
ERBB3	ZBTB7B	0.292	1
ERBB3	Amp_6q21	0.292	1
KDM6A	Amp_3q26.33	0.292	1
NFE2L2	KDM5A	0.292	1
NFE2L2	Amp_4p16.3	0.292	1
PROS1	RB1	0.292	1
PROS1	9p-Del	0.292	1
RB1	Del_Xp11.3	0.292	1
RXRA	OGDH	0.292	1
RXRA	Amp_4p16.3	0.292	1
ZBTB7B	Amp_1q21.3	0.292	1
ZNF180	17p-Del	0.292	1
CPD	Amp_7p11.2	0.292	1
DDX3X	11p-Del	0.292	1
DDX3X	17p-Del	0.292	1
EPHA2	16p-Del	0.292	1
HFM1	16p-Del	0.292	1
KDM5A	MYO16	0.292	1
MBD1	9p-Del	0.292	1
MYO16	Amp_4p16.3	0.292	1
NCOA1	16p-Del	0.292	1
NCOA1	Amp_11q22.2	0.292	1
RARG	17p-Del	0.292	1
RBM10	SPTAN1	0.292	1
RBM10	Amp_7p11.2	0.292	1
TRERF1	Del_5q12.1	0.292	1
ASXL1	20p-Amp	0.292	1
CNOT3	Amp_1q21.3	0.292	1
FAM47C	9q-Del	0.292	1
19q-Amp	17p-Del	0.292	1
16p-Del	Amp_4p16.3	0.292	1
ARID1A	9p-Del	0.293	1
CSMD3	16p-Del	0.293	1
CSMD3	Amp_11q22.2	0.293	1
HRAS	Amp_3q26.33	0.293	1
RB1	STAG2	0.293	1
ZFP36L2	Amp_3q26.33	0.293	1
ACTB	Del_10q23.31	0.293	1
RIPK4	Amp_11q13.3	0.293	1
CUL1	Amp_11q13.3	0.293	1
9p-Del	Amp_5p15.33	0.293	1
CFHR4	Del_9p21.3	0.294	1
CTNNB1	9q-Del	0.294	1
KDM6A	CDKN2AIPNL	0.294	1
KDM6A	Amp_1q23.3	0.294	1
NFE2L3	9q-Del	0.294	1
PROS1	Del_9p21.3	0.294	1
RB1	FAT1	0.294	1
RB1	Del_11q23.3	0.294	1
RHOA	Del_2q34	0.294	1
RUNX1	9q-Del	0.294	1
RUNX1	Del_5q12.1	0.294	1
TP53	PPARG	0.294	1
TP53	Del_Xp11.3	0.294	1
DCDC1	9q-Del	0.294	1
DENND5B	Del_3p14.2	0.294	1
THRAP3	Del_5q12.1	0.294	1
ZNF750	9q-Del	0.294	1
ATM	8p-Del	0.295	1
KLF5	Del_8p21.3	0.295	1
ARID1B	Del_8p21.3	0.295	1
ATM	Amp_5p15.33	0.296	1
ATM	Amp_19q13.43	0.296	1
CSMD3	Amp_3q26.33	0.296	1
ASXL2	20q-Amp	0.297	1
CREBBP	ARID2	0.297	1
CTNNB1	10q-Del	0.297	1
CTNNB1	Del_15q13.1	0.297	1
FBXW7	Amp_7p11.2	0.297	1
FOXA1	Del_15q13.1	0.297	1
FOXQ1	10q-Del	0.297	1
FOXQ1	Del_15q13.1	0.297	1
KRAS	6q-Del	0.297	1
KRAS	Del_15q13.1	0.297	1
NFE2L3	3q-Amp	0.297	1
PKHD1	SPTAN1	0.297	1
PKHD1	Amp_7p11.2	0.297	1
PTEN	3q-Amp	0.297	1
PTEN	6q-Del	0.297	1
RUNX1	6q-Del	0.297	1
SARNP	Amp_8p11.21	0.297	1
ARID2	Amp_7p21.1	0.297	1
ARID2	Del_11q25	0.297	1
CASP8	10q-Del	0.297	1
EXOSC10	3q-Amp	0.297	1
IKZF2	6q-Del	0.297	1
IKZF2	Del_15q13.1	0.297	1
OR10Z1	Del_2q22.1	0.297	1
ZNF750	10q-Del	0.297	1
ZNF750	6q-Del	0.297	1
ZNF750	Del_15q13.1	0.297	1
BAP1	3q-Amp	0.297	1
BAP1	10q-Del	0.297	1
CDH1	3q-Amp	0.297	1
FUS	Amp_8p11.21	0.297	1
FUS	Del_2q22.1	0.297	1
SPTAN1	Amp_16p13.2	0.297	1
4p-Del	Amp_1q21.3	0.297	1
NHLRC1	Amp_1q23.3	0.298	1
ATM	Del_11q23.3	0.299	1
ERBB2	Del_9p21.3	0.299	1
HIST1H3B	Del_4q22.1	0.299	1
PSMC6	Amp_6p22.3	0.299	1
CNOT3	Amp_6p22.3	0.299	1
ZNF773	Amp_6p22.3	0.299	1
Del_1q32.1	Del_4q22.1	0.299	1
ERCC2	NFE2L2	0.3	1
ERCC2	Amp_11q22.2	0.3	1
FGFR3	3q-Amp	0.3	1
MIPOL1	Amp_7p11.2	0.3	1
SF1	SPTAN1	0.3	1
STAG2	3q-Amp	0.3	1
C12orf43	Amp_3q26.33	0.302	1
C12orf43	Amp_11q13.3	0.302	1
CDKN1A	RHOB	0.302	1
ERBB2	Amp_6p22.3	0.302	1
HIST1H2AG	Amp_3q26.33	0.302	1
TGIF2LX	Amp_11q13.3	0.302	1
ZNF180	8q-Amp	0.302	1
ZNF180	Del_18q23	0.302	1
CCNE2	Amp_3q26.33	0.302	1
CCNE2	Amp_11q13.3	0.302	1
DPYS	Amp_19q13.43	0.302	1
IL10RB	Del_10q23.31	0.302	1
LETMD1	Amp_3q26.33	0.302	1
LETMD1	Amp_11q13.3	0.302	1
NDC80	8q-Amp	0.302	1
PHLDA3	Amp_11q13.3	0.302	1
PHLDA3	Del_10q23.31	0.302	1
PPP4R1	Amp_19q13.43	0.302	1
TAF11	Amp_11q13.3	0.302	1
TAF11	Del_10q23.31	0.302	1
SPTAN1	8q-Amp	0.302	1
Amp_4q13.3	Del_18q23	0.302	1
ARID1A	UGP2	0.303	1
ATM	RIPK4	0.303	1
ATM	CUL1	0.303	1
KRAS	Del_13q14.2	0.303	1
PIGS	Amp_5p15.33	0.303	1
SHANK1	Del_9p21.3	0.303	1
CDK12	20q-Amp	0.303	1
FAT1	14q-Del	0.303	1
SF3B3	Del_13q14.2	0.303	1
UBA52	11p-Del	0.303	1
UBA52	17p-Del	0.303	1
ZBTB47	17p-Del	0.303	1
FAM47C	Del_13q14.2	0.303	1
C3orf70	KDM6A	0.304	1
CREBBP	9q-Del	0.304	1
HRAS	KDM6A	0.304	1
HRAS	RHOB	0.304	1
KDM6A	CUL1	0.304	1
RHOB	ZNF626	0.304	1
ZBTB47	Amp_8q22.3	0.304	1
HLA-A	Amp_8q22.3	0.304	1
15q-Del	Amp_10p14	0.304	1
DIAPH2	CPD	0.305	1
DIAPH2	RBM10	0.305	1
DIAPH2	SF3B3	0.305	1
DIAPH2	FAM47C	0.305	1
EP300	Del_12p13.1	0.305	1
FGFR3	GTF2I	0.305	1
FGFR3	16p-Del	0.305	1
FGFR3	Amp_11q22.2	0.305	1
METTL3	20q-Amp	0.305	1
NFE2L2	Amp_8p11.23	0.305	1
NFE2L2	Del_16p13.3	0.305	1
PLCXD3	9p-Del	0.305	1
RB1	AGR3	0.305	1
RHOA	FAT1	0.305	1
STAG2	ITGA4	0.305	1
STAG2	SSH3	0.305	1
STAG2	TXNIP	0.305	1
TSC1	Amp_11q13.3	0.305	1
ATAD5	Del_8p23.3	0.305	1
CPD	Amp_12q15	0.305	1
CPD	Amp_13q22.1	0.305	1
RBM10	TRERF1	0.305	1
RBM10	FAM47C	0.305	1
RBM10	Amp_12q15	0.305	1
RBP2	9p-Del	0.305	1
SF3B3	Del_6p25.3	0.305	1
TRERF1	FAM47C	0.305	1
TXNIP	Del_16p13.3	0.305	1
ASXL1	17p-Del	0.305	1
CNOT1	Amp_13q22.1	0.305	1
DNAH6	Amp_8p11.23	0.305	1
FUS	Amp_19q12	0.305	1
Amp_8p11.23	Del_11q25	0.305	1
CDKN1A	5p-Amp	0.306	1
CREBBP	Del_6q27	0.306	1
ERBB3	HSP90AA1	0.306	1
ASXL1	15q-Del	0.306	1
5p-Amp	5q-Del	0.306	1
15q-Del	Del_12p13.1	0.306	1
Amp_7p21.1	Del_11q25	0.306	1
KLF5	Del_9p21.3	0.307	1
KRAS	Del_17p12	0.307	1
NFE2L3	Del_17p12	0.307	1
TP53	NAA15	0.307	1
TP53	RARG	0.307	1
ZNF180	Del_9p23	0.307	1
CASP8	Del_17p12	0.307	1
RARG	Del_9p23	0.307	1
Amp_4q13.3	Del_9p23	0.307	1
ARID1A	11p-Del	0.308	1
CNNM4	Del_6p25.3	0.308	1
EP300	Amp_13q22.1	0.308	1
EP300	Del_6p25.3	0.308	1
GPS2	Amp_13q22.1	0.308	1
GPS2	Del_16q23.1	0.308	1
MIPOL1	Amp_13q22.1	0.308	1
SF1	Amp_12q15	0.308	1
ZNF511	Amp_13q22.1	0.308	1
EPHA2	PARD3	0.308	1
EPHA2	9p-Del	0.308	1
HFM1	7p-Amp	0.308	1
KDM5A	9p-Del	0.308	1
NCOA1	7p-Amp	0.308	1
NCOA1	9p-Del	0.308	1
ARID1B	Amp_4p16.3	0.308	1
ASXL1	Amp_20q11.21	0.308	1
OGDH	4q-Del	0.308	1
OGDH	9p-Del	0.308	1
7p-Amp	Amp_4p16.3	0.308	1
ASXL2	GNA13	0.309	1
ATM	PHLDA3	0.309	1
ATM	SCARF2	0.309	1
CTNNB1	PKHD1	0.309	1
FBXW7	FOXA1	0.309	1
FBXW7	DCDC1	0.309	1
FOXA1	MED13	0.309	1
FOXQ1	ATAD5	0.309	1
GPR50	PKHD1	0.309	1
HIST1H3B	Amp_17q12	0.309	1
KLF5	18q-Del	0.309	1
KRAS	PKHD1	0.309	1
METTL3	Amp_5p15.33	0.309	1
PKHD1	THRAP3	0.309	1
PKHD1	CDH1	0.309	1
RPTN	ZFP36L1	0.309	1
RPTN	ARID2	0.309	1
ZFP36L1	MED13	0.309	1
ZFP36L1	11p-Del	0.309	1
ARID2	17p-Del	0.309	1
DCDC1	Amp_16p13.2	0.309	1
DDX3X	Amp_1p34.2	0.309	1
IL10RB	Del_4q34.2	0.309	1
PHLDA3	Del_4q34.2	0.309	1
RARG	Amp_1p34.2	0.309	1
THRAP3	Amp_16p13.2	0.309	1
GNA13	Amp_17q12	0.309	1
SCARF2	Del_4q34.2	0.309	1
17p-Del	Amp_1p34.2	0.309	1
4p-Del	Amp_6p22.3	0.309	1
Amp_7p11.2	Del_11q23.3	0.309	1
CREBBP	KDM5A	0.31	1
TBC1D12	OGDH	0.31	1
GLTP	8q-Amp	0.31	1
HFM1	Del_11q25	0.31	1
KDM5A	Amp_7p21.1	0.31	1
NCOA1	Amp_7p21.1	0.31	1
UBA52	8q-Amp	0.31	1
UBA52	Del_18q23	0.31	1
ZBTB47	8q-Amp	0.31	1
ZBTB47	Del_18q23	0.31	1
HLA-A	8q-Amp	0.31	1
HLA-A	Del_18q23	0.31	1
OGDH	Del_6q27	0.31	1
OGDH	Del_11q25	0.31	1
UNC93B1	8q-Amp	0.31	1
UNC93B1	Del_18q23	0.31	1
Amp_4p16.3	Amp_7p21.1	0.31	1
HORMAD1	18q-Del	0.311	1
NF2	Del_14q24.1	0.311	1
PIK3CA	Del_13q14.2	0.311	1
ZBTB7B	18q-Del	0.311	1
ZBTB7B	Del_14q24.1	0.311	1
PSMC6	18q-Del	0.311	1
PSMC6	Del_14q24.1	0.311	1
CNOT3	Del_14q24.1	0.311	1
ZNF773	18q-Del	0.311	1
ZNF773	Del_14q24.1	0.311	1
CTNNB1	5p-Amp	0.312	1
FOXA1	5p-Amp	0.312	1
GPR50	5p-Amp	0.312	1
METTL3	NFE2L2	0.312	1
METTL3	Amp_11q22.2	0.312	1
NFE2L2	RHOA	0.312	1
NFE2L2	SHANK1	0.312	1
RHOA	22q-Del	0.312	1
RHOA	Amp_11q22.2	0.312	1
SHANK1	22q-Del	0.312	1
SHANK1	Amp_11q22.2	0.312	1
ARID2	Amp_17q23.3	0.312	1
CASP8	5p-Amp	0.312	1
EXOSC10	5p-Amp	0.312	1
IKZF2	5p-Amp	0.312	1
NEK11	14q-Del	0.312	1
PPARGC1A	4p-Del	0.312	1
THRAP3	5p-Amp	0.312	1
ZNF750	5p-Amp	0.312	1
DNAH6	4p-Del	0.312	1
TMCO4	Del_2q37.1	0.312	1
5p-Amp	Del_1p36.11	0.312	1
ATM	9q-Del	0.313	1
CFHR4	TSC1	0.313	1
CREBBP	UGP2	0.313	1
CREBBP	FUS	0.313	1
CREBBP	Amp_1q21.3	0.313	1
IDH1	TBC1D12	0.313	1
IDH1	Del_6q27	0.313	1
POTEG	Amp_7p21.1	0.313	1
POTEG	Del_6q27	0.313	1
PROS1	TSC1	0.313	1
SARNP	Del_11q25	0.313	1
TBC1D12	OR10Z1	0.313	1
TSC1	CTCF	0.313	1
TSC1	MARK2	0.313	1
TSC1	PPP4R1	0.313	1
ZNF486	Del_6q27	0.313	1
ZNF486	Del_11q25	0.313	1
MED13	Amp_12q15	0.313	1
MED13	Amp_13q22.1	0.313	1
OR10Z1	Del_11q25	0.313	1
EP300	9p-Del	0.314	1
ERBB3	Amp_13q22.1	0.314	1
KDM6A	Del_2q37.1	0.314	1
NFE2L2	Del_2q37.1	0.314	1
SF3B1	Del_2q37.1	0.314	1
TSC1	14q-Del	0.314	1
TSC1	4p-Del	0.314	1
CDK12	Del_8p23.3	0.314	1
CNOT1	5p-Amp	0.314	1
Amp_11q22.2	Del_2q37.1	0.314	1
Amp_17q12	Del_2q22.1	0.314	1
CDKN1A	ERCC2	0.315	1
PKHD1	Amp_5p15.33	0.315	1
RXRA	Del_4q22.1	0.315	1
PARD3	Del_11p15.5	0.315	1
RBM26	8p-Del	0.315	1
Amp_11q22.2	Del_4q22.1	0.315	1
RHOA	Del_2q22.1	0.316	1
SHANK1	Del_2q22.1	0.316	1
RBM10	Amp_8q22.3	0.316	1
TRERF1	Amp_8q22.3	0.316	1
Amp_10p14	Del_9p23	0.316	1
CNNM4	20p-Amp	0.317	1
MIPOL1	Del_22q13.32	0.317	1
PIK3CA	SF1	0.317	1
SF1	20p-Amp	0.317	1
TSC1	8p-Del	0.317	1
ZNF511	20p-Amp	0.317	1
ZNF511	Del_22q13.32	0.317	1
CDK12	Amp_8p11.21	0.317	1
CTCF	Amp_10p14	0.317	1
TFG	Del_22q13.32	0.317	1
ASXL1	8q-Amp	0.317	1
C3orf70	Amp_22q12.2	0.318	1
CDKN2A	Amp_19q13.43	0.318	1
GPR50	Amp_8q22.3	0.318	1
HRAS	Amp_22q12.2	0.318	1
RB1	Amp_8p11.21	0.318	1
STAG2	Del_11p15.5	0.318	1
TP53	SLC9A4	0.318	1
ZFP36L2	Amp_22q12.2	0.318	1
ACTB	Amp_22q12.2	0.318	1
SF3B3	20p-Amp	0.318	1
THRAP3	Amp_8q22.3	0.318	1
ZNF750	Amp_8q22.3	0.318	1
CUL1	Amp_22q12.2	0.318	1
FAM47C	Del_22q13.32	0.318	1
CDKN2AIPNL	Amp_5p15.33	0.319	1
DENND5B	SPTAN1	0.319	1
RBM26	Amp_7p11.2	0.319	1
SPTAN1	7q-Amp	0.319	1
5p-Amp	17p-Del	0.319	1
CDKN1A	HIST1H3B	0.32	1
CDKN1A	FAT1	0.32	1
CDKN1A	17q-Amp	0.32	1
CDKN1A	20q-Amp	0.32	1
CDKN1A	Amp_1q23.3	0.32	1
FAT1	Del_19p13.3	0.32	1
TMCO4	Del_19p13.3	0.32	1
Del_19p13.3	Del_Xq21.33	0.32	1
ELF3	IDH1	0.321	1
ELF3	PIGS	0.321	1
ELF3	SARNP	0.321	1
ELF3	ZNF486	0.321	1
ELF3	OR10Z1	0.321	1
ELF3	FUS	0.321	1
POTEG	Del_3p14.2	0.321	1
FUS	Del_3p14.2	0.321	1
4p-Del	Amp_20q11.21	0.321	1
CSMD3	KLF5	0.322	1
ELF3	HFM1	0.322	1
ELF3	OGDH	0.322	1
NF1	EXOSC10	0.322	1
NF1	ZNF750	0.322	1
NF1	Del_1p36.11	0.322	1
PLCXD3	Amp_10p14	0.322	1
HFM1	Amp_17q23.3	0.322	1
KDM5A	Amp_17q23.3	0.322	1
NCOA1	Amp_17q23.3	0.322	1
DAZAP1	Amp_10p14	0.322	1
OGDH	Amp_17q23.3	0.322	1
DIAPH2	PSIP1	0.323	1
DIAPH2	RBM26	0.323	1
DIAPH2	7q-Amp	0.323	1
IDH1	Del_17p12	0.323	1
SARNP	Del_17p12	0.323	1
ZFP36L1	Del_18q23	0.323	1
CPD	7q-Amp	0.323	1
FAT1	Amp_1q23.3	0.323	1
SF3B3	15q-Del	0.323	1
CNOT1	7q-Amp	0.323	1
FUS	Del_17p12	0.323	1
Amp_1p34.2	Del_18q23	0.323	1
C12orf43	Del_2q34	0.324	1
NHLRC1	Del_2q34	0.324	1
PIK3CA	Amp_22q12.2	0.324	1
CCNE2	Del_2q34	0.324	1
IL10RB	Del_2q34	0.324	1
LETMD1	Del_2q34	0.324	1
TAF11	Del_2q34	0.324	1
ASXL2	8q-Amp	0.325	1
CFHR4	6q-Del	0.325	1
CFHR4	Del_15q13.1	0.325	1
HRAS	Del_2q34	0.325	1
PROS1	6q-Del	0.325	1
ACTB	Del_2q34	0.325	1
CTCF	Del_15q13.1	0.325	1
HFM1	Del_12p13.1	0.325	1
HSP90AA1	KDM5A	0.325	1
MARK2	3q-Amp	0.325	1
MARK2	6q-Del	0.325	1
MARK2	Del_15q13.1	0.325	1
MBD1	3q-Amp	0.325	1
MBD1	Del_15q13.1	0.325	1
NCOA1	Del_12p13.1	0.325	1
PPARG	10q-Del	0.325	1
PPARG	Del_15q13.1	0.325	1
PPP4R1	10q-Del	0.325	1
OGDH	Del_12p13.1	0.325	1
Del_15q13.1	Del_Xp11.3	0.325	1
CDKN2A	SSH3	0.326	1
CDKN2A	Del_8p21.3	0.326	1
CFHR4	8p-Del	0.326	1
ELF3	Del_6q27	0.326	1
FBXW7	Amp_8p11.23	0.326	1
GTF2I	RHOB	0.326	1
GTF2I	Amp_11q13.3	0.326	1
KPTN	Amp_8q22.3	0.326	1
PKHD1	Amp_8p11.23	0.326	1
RHOB	ITGA4	0.326	1
RHOB	DNAH6	0.326	1
STAG2	Amp_16p13.2	0.326	1
ITGA4	Del_10q23.31	0.326	1
PPARG	8p-Del	0.326	1
RBM10	Amp_1q21.3	0.326	1
DNAH6	Amp_3q26.33	0.326	1
Amp_12q15	Del_18q23	0.326	1
Amp_17q23.3	Del_6q27	0.326	1
ERBB3	SF1	0.327	1
CUL1	Del_11p15.5	0.327	1
ELF3	Del_16p13.3	0.328	1
KLF5	RHOA	0.328	1
METTL3	7p-Amp	0.328	1
METTL3	Amp_19q12	0.328	1
SHANK1	4q-Del	0.328	1
AGR3	8p-Del	0.328	1
ATAD5	Amp_8q22.3	0.328	1
Amp_7p11.2	Del_2q22.1	0.328	1
EP300	Amp_1q23.3	0.329	1
MIPOL1	Del_9p21.3	0.329	1
NF2	Amp_3p25.2	0.329	1
ZNF511	Del_9p21.3	0.329	1
CNOT3	Amp_3p25.2	0.329	1
CSMD3	GLTP	0.33	1
CTNNB1	EP300	0.33	1
CTNNB1	11p-Del	0.33	1
EP300	DCDC1	0.33	1
EP300	THRAP3	0.33	1
FBXW7	20p-Amp	0.33	1
FOXQ1	11p-Del	0.33	1
FOXQ1	17p-Del	0.33	1
KRAS	11p-Del	0.33	1
KRAS	17p-Del	0.33	1
PIK3CA	Amp_8p11.21	0.33	1
CASP8	17p-Del	0.33	1
EXOSC10	11p-Del	0.33	1
THRAP3	11p-Del	0.33	1
ZNF750	11p-Del	0.33	1
CDH1	11p-Del	0.33	1
1q-Amp	17p-Del	0.33	1
5p-Amp	Amp_10p14	0.33	1
10q-Del	Amp_11q13.3	0.33	1
ASXL2	22q-Del	0.331	1
ASXL2	Amp_19q12	0.331	1
CSMD3	RARG	0.331	1
NFE2L2	Amp_11q13.3	0.331	1
NFE2L2	Amp_17q12	0.331	1
ZBTB7B	Del_4q22.1	0.331	1
FAT1	Del_16q23.1	0.331	1
MYO16	Amp_11q13.3	0.331	1
MYO16	Amp_17q12	0.331	1
PSMC6	Del_4q22.1	0.331	1
ZNF773	Del_4q22.1	0.331	1
3q-Amp	14q-Del	0.331	1
3q-Amp	4p-Del	0.331	1
22q-Del	Amp_11q13.3	0.331	1
Amp_19q13.43	Del_1q32.1	0.331	1
C12orf43	Del_11q23.3	0.332	1
EP300	Amp_8q22.3	0.332	1
ERBB3	TRERF1	0.332	1
HIST1H2AG	Del_11q23.3	0.332	1
NHLRC1	20q-Amp	0.332	1
PSIP1	Amp_12q15	0.332	1
PSIP1	Del_6p25.3	0.332	1
TGIF2LX	20q-Amp	0.332	1
CCNE2	Del_11q23.3	0.332	1
FAT1	LETMD1	0.332	1
FAT1	PHLDA3	0.332	1
FAT1	SNRPB	0.332	1
FAT1	TAF11	0.332	1
FAT1	19p-Del	0.332	1
IL10RB	20q-Amp	0.332	1
IL10RB	Del_11q23.3	0.332	1
PHLDA3	Del_11q23.3	0.332	1
RBM26	Amp_12q15	0.332	1
RBM26	Del_6p25.3	0.332	1
RBM26	Del_16q23.1	0.332	1
SNRPB	20q-Amp	0.332	1
SSH3	Amp_20q11.21	0.332	1
TAF11	20q-Amp	0.332	1
C3orf70	16p-Del	0.334	1
C3orf70	22q-Del	0.334	1
HIST1H2AG	KDM6A	0.334	1
HRAS	NFE2L2	0.334	1
HRAS	22q-Del	0.334	1
HRAS	Amp_11q22.2	0.334	1
KDM6A	TGIF2LX	0.334	1
KDM6A	PHLDA3	0.334	1
NFE2L2	ZFP36L2	0.334	1
NFE2L2	RIPK4	0.334	1
NFE2L2	SLC9A4	0.334	1
NFE2L2	ZNF626	0.334	1
PLCXD3	9q-Del	0.334	1
RXRA	ZFP36L2	0.334	1
RXRA	CUL1	0.334	1
SF3B1	ZNF626	0.334	1
ZBTB7B	Del_8p21.3	0.334	1
ZFP36L2	22q-Del	0.334	1
ACTB	Amp_11q22.2	0.334	1
MYO16	CUL1	0.334	1
MYO16	3p-Amp	0.334	1
PSMC6	Del_8p21.3	0.334	1
RBP2	9q-Del	0.334	1
RBP2	Del_5q12.1	0.334	1
RIPK4	16p-Del	0.334	1
RIPK4	Amp_11q22.2	0.334	1
SLC9A4	16p-Del	0.334	1
STK32B	Del_8p21.3	0.334	1
ZNF626	16p-Del	0.334	1
OGDH	Del_8p23.3	0.334	1
11q-Del	Del_4q22.1	0.334	1
CFHR4	9q-Del	0.335	1
CFHR4	Del_5q12.1	0.335	1
CTNNB1	Amp_1p34.2	0.335	1
FOXA1	Amp_1p34.2	0.335	1
FOXQ1	ZFP36L1	0.335	1
FOXQ1	Amp_1p34.2	0.335	1
GPR50	ARID2	0.335	1
KLF5	Amp_8p11.23	0.335	1
KRAS	ARID2	0.335	1
PROS1	9q-Del	0.335	1
PTEN	ZFP36L1	0.335	1
PTEN	ARID2	0.335	1
RUNX1	ZFP36L1	0.335	1
STAG2	PARD3	0.335	1
STAG2	7p-Amp	0.335	1
ZFP36L1	DCDC1	0.335	1
ZFP36L1	IKZF2	0.335	1
ZFP36L1	THRAP3	0.335	1
ZFP36L1	CDH1	0.335	1
ZFP36L1	Del_1p36.11	0.335	1
ARID2	CASP8	0.335	1
ARID2	WAC	0.335	1
ARID2	ZNF750	0.335	1
ARID2	CDH1	0.335	1
ARID2	1q-Amp	0.335	1
ARID2	Del_1p36.11	0.335	1
CTCF	9q-Del	0.335	1
CTCF	Del_5q12.1	0.335	1
MBD1	9q-Del	0.335	1
USP28	9q-Del	0.335	1
CDH1	Amp_1p34.2	0.335	1
7p-Amp	Del_16p13.3	0.335	1
NF1	Amp_12q15	0.336	1
NF1	Amp_13q22.1	0.336	1
RB1	17q-Amp	0.336	1
RB1	Del_Xq21.33	0.336	1
CDK12	Del_7q36.3	0.336	1
NAA15	4p-Del	0.336	1
NDC80	14q-Del	0.336	1
TRERF1	Amp_6p22.3	0.336	1
GNA13	9p-Del	0.336	1
19q-Amp	4p-Del	0.336	1
4p-Del	Amp_1q23.3	0.336	1
ARID1A	CTCF	0.337	1
ARID1A	DPYS	0.337	1
CFHR4	Amp_16p13.2	0.337	1
DIAPH2	11p-Del	0.337	1
FBXW7	PPARG	0.337	1
FBXW7	PPP4R1	0.337	1
FGFR3	ZBTB47	0.337	1
FGFR3	UNC93B1	0.337	1
FGFR3	Del_8p23.3	0.337	1
NRAS	STAG2	0.337	1
NRAS	Amp_8p11.23	0.337	1
PIK3CA	5p-Amp	0.337	1
PKHD1	PROS1	0.337	1
PKHD1	CTCF	0.337	1
PKHD1	MARK2	0.337	1
PKHD1	PPARG	0.337	1
PROS1	Amp_16p13.2	0.337	1
SHANK1	Del_17p12	0.337	1
STAG2	UNC93B1	0.337	1
ZFP36L2	FAT1	0.337	1
ACTB	FAT1	0.337	1
ACTB	Del_11q23.3	0.337	1
ATAD5	MARK2	0.337	1
FAT1	SLC9A4	0.337	1
FAT1	3p-Amp	0.337	1
GLTP	Amp_8p11.23	0.337	1
MARK2	Amp_16p13.2	0.337	1
MBD1	MED13	0.337	1
NDC80	Del_9p21.3	0.337	1
PPARG	Amp_5p15.33	0.337	1
PPARG	Amp_16p13.2	0.337	1
PSMC6	Del_11p15.5	0.337	1
SF3B3	11p-Del	0.337	1
USP28	Amp_16p13.2	0.337	1
ZBTB47	Amp_8p11.23	0.337	1
HLA-A	Amp_8p11.23	0.337	1
HLA-A	Del_16p13.3	0.337	1
UNC93B1	Amp_8p11.23	0.337	1
ZNF773	Del_11p15.5	0.337	1
Amp_7p11.2	Del_14q24.1	0.337	1
ERCC2	Amp_10p14	0.338	1
OR10Z1	SPTAN1	0.338	1
UGP2	Amp_7p11.2	0.338	1
FUS	Amp_7p11.2	0.338	1
ZNF185	Del_11p15.5	0.338	1
KLF5	Del_4q22.1	0.339	1
TP53	Del_11q23.3	0.339	1
DENND5B	Del_9p21.3	0.339	1
ARID1B	Del_4q22.1	0.339	1
7q-Amp	Del_9p21.3	0.339	1
BTG2	Amp_8p11.21	0.34	1
C12orf43	Amp_8p11.21	0.34	1
CREBBP	METTL3	0.34	1
ERCC2	FGFR3	0.34	1
FOXA1	Del_18q23	0.34	1
FOXQ1	8q-Amp	0.34	1
HIST1H2AG	Amp_8p11.21	0.34	1
HIST1H2AG	Del_2q22.1	0.34	1
KRAS	Del_18q23	0.34	1
METTL3	Amp_7p21.1	0.34	1
NHLRC1	Amp_8p11.21	0.34	1
PIK3CA	Amp_3p25.2	0.34	1
PTEN	Del_18q23	0.34	1
RHOA	Del_6q27	0.34	1
RUNX1	Del_18q23	0.34	1
SF3B1	Del_9p23	0.34	1
TGIF2LX	Amp_8p11.21	0.34	1
CASP8	8q-Amp	0.34	1
EXOSC10	8q-Amp	0.34	1
IL10RB	Amp_8p11.21	0.34	1
IL10RB	Del_2q22.1	0.34	1
LETMD1	Del_2q22.1	0.34	1
PHLDA3	Amp_8p11.21	0.34	1
PHLDA3	Del_2q22.1	0.34	1
TAF11	Amp_8p11.21	0.34	1
THRAP3	8q-Amp	0.34	1
ZNF750	Del_18q23	0.34	1
SCARF2	Amp_8p11.21	0.34	1
SCARF2	Del_2q22.1	0.34	1
1q-Amp	Del_18q23	0.34	1
19p-Del	Amp_8p11.21	0.34	1
ARID1A	RHOB	0.341	1
FGFR3	RPTN	0.341	1
FGFR3	NAA15	0.341	1
PLCXD3	Del_13q14.2	0.341	1
STAG2	RARG	0.341	1
ZNF180	Amp_8p11.23	0.341	1
NAA15	Amp_8p11.23	0.341	1
NEK11	Amp_22q12.2	0.341	1
RARG	Amp_8p11.23	0.341	1
RARG	Del_16p13.3	0.341	1
ASXL2	HORMAD1	0.342	1
DIAPH2	HFM1	0.342	1
DIAPH2	Amp_4p16.3	0.342	1
PSIP1	7q-Amp	0.342	1
ZBTB7B	Amp_17q12	0.342	1
EPHA2	TRERF1	0.342	1
EPHA2	FAM47C	0.342	1
HFM1	TRERF1	0.342	1
NCOA1	FAM47C	0.342	1
RBM10	OGDH	0.342	1
TRERF1	Amp_4p16.3	0.342	1
7q-Amp	15q-Del	0.342	1
Amp_5p15.33	Amp_12q15	0.342	1
TSC1	TMCO4	0.343	1
TSC1	Del_1q32.1	0.343	1
Amp_17q23.3	Del_4q22.1	0.343	1
KLF5	Amp_1q23.3	0.344	1
STAG2	8q-Amp	0.344	1
ZFP36L1	SPTAN1	0.344	1
ARID2	Amp_7p11.2	0.344	1
DDX3X	Del_8p23.3	0.344	1
NAA15	Del_8p23.3	0.344	1
USP28	Del_13q14.2	0.344	1
SPTAN1	Amp_10p14	0.344	1
ATM	10q-Del	0.345	1
METTL3	HSP90AA1	0.345	1
RHOA	HSP90AA1	0.345	1
RHOA	Del_12p13.1	0.345	1
NKX2-2	Amp_1q21.3	0.345	1
RBM26	20p-Amp	0.345	1
CDKN2A	9q-Del	0.346	1
GPS2	18q-Del	0.346	1
MIPOL1	18q-Del	0.346	1
ACTB	Amp_8q22.3	0.346	1
ARID2	Amp_1p34.2	0.346	1
SLC9A4	Amp_8q22.3	0.346	1
TFG	18q-Del	0.346	1
TFG	Del_14q24.1	0.346	1
CUL1	Amp_8q22.3	0.346	1
CDKN1A	MYO16	0.347	1
CREBBP	CDK12	0.347	1
ERBB3	FBXW7	0.347	1
IDH1	Del_6p25.3	0.347	1
KDM6A	Del_13q14.2	0.347	1
METTL3	RB1	0.347	1
PIGS	Amp_13q22.1	0.347	1
POTEG	Del_6p25.3	0.347	1
RB1	RHOA	0.347	1
RB1	SHANK1	0.347	1
RHOA	9p-Del	0.347	1
SARNP	Amp_13q22.1	0.347	1
TBC1D12	4p-Del	0.347	1
TP53	ADC	0.347	1
ZNF486	Amp_12q15	0.347	1
CPD	Amp_20q11.21	0.347	1
MYO16	11q-Del	0.347	1
OR10Z1	Amp_12q15	0.347	1
SF3B3	Amp_20q11.21	0.347	1
11q-Del	Amp_11q22.2	0.347	1
ASXL2	Amp_7p21.1	0.348	1
ASXL2	Del_6q27	0.348	1
BTG2	ERBB2	0.348	1
ERBB2	PHLDA3	0.348	1
ERBB2	Amp_7p11.2	0.348	1
HFM1	SPTAN1	0.348	1
HFM1	Amp_7p11.2	0.348	1
KDM5A	SPTAN1	0.348	1
KDM5A	Amp_7p11.2	0.348	1
SLC9A4	Del_2q22.1	0.348	1
OGDH	Amp_7p11.2	0.348	1
19p-Del	Amp_19q12	0.348	1
Amp_4p16.3	Amp_7p11.2	0.348	1
Amp_10p14	Del_11q23.3	0.348	1
ASXL2	RB1	0.349	1
ERCC2	ASXL1	0.349	1
NF1	DPYS	0.349	1
NF1	USP28	0.349	1
PKHD1	14q-Del	0.349	1
CPD	8q-Amp	0.349	1
CPD	Del_18q23	0.349	1
EPHA2	Del_9p23	0.349	1
MED13	4p-Del	0.349	1
SF3B3	Del_18q23	0.349	1
FAM47C	Del_18q23	0.349	1
5p-Amp	15q-Del	0.349	1
C3orf70	7p-Amp	0.35	1
CDKN2A	RPTN	0.35	1
CDKN2A	Amp_4q13.3	0.35	1
HRAS	KLF5	0.35	1
HRAS	PARD3	0.35	1
KLF5	CUL1	0.35	1
KLF5	3p-Amp	0.35	1
RHOB	ZNF180	0.35	1
RHOB	DDX3X	0.35	1
RHOB	NAA15	0.35	1
RHOB	19q-Amp	0.35	1
RHOB	Amp_4q13.3	0.35	1
RHOB	Del_7q36.3	0.35	1
RXRA	9p-Del	0.35	1
SF3B1	9p-Del	0.35	1
ZFP36L2	7p-Amp	0.35	1
ZFP36L2	4q-Del	0.35	1
ACTB	PARD3	0.35	1
ACTB	7p-Amp	0.35	1
PARD3	CUL1	0.35	1
PARD3	3p-Amp	0.35	1
SLC9A4	7p-Amp	0.35	1
ZNF626	4q-Del	0.35	1
CUL1	7p-Amp	0.35	1
GPS2	Amp_8q22.3	0.351	1
NRAS	Amp_11q13.3	0.351	1
NRAS	Del_10q23.31	0.351	1
RB1	Del_17p12	0.351	1
ZNF511	Amp_8q22.3	0.351	1
NCOA1	8p-Del	0.351	1
UBA52	Amp_3q26.33	0.351	1
HLA-A	Amp_3q26.33	0.351	1
HLA-A	Amp_11q13.3	0.351	1
HLA-A	Del_10q23.31	0.351	1
UNC93B1	Amp_3q26.33	0.351	1
ATM	5p-Amp	0.352	1
CDKN1A	STK32B	0.352	1
CDKN1A	ZNF773	0.352	1
CDKN2A	Del_15q13.1	0.352	1
FBXW7	Del_17p12	0.352	1
NF2	11q-Del	0.352	1
NF2	Del_19p13.3	0.352	1
RHOA	Amp_17q23.3	0.352	1
RHOA	Del_3p14.2	0.352	1
ZBTB7B	11q-Del	0.352	1
ZBTB7B	Del_19p13.3	0.352	1
NCOA1	Amp_1q23.3	0.352	1
PSMC6	5q-Del	0.352	1
PSMC6	Del_19p13.3	0.352	1
STK32B	11q-Del	0.352	1
ASXL1	Del_11p15.5	0.352	1
CNOT3	11q-Del	0.352	1
ZNF773	11q-Del	0.352	1
11q-Del	Amp_6q21	0.352	1
CDKN1A	Amp_17q12	0.353	1
FGFR3	NF1	0.353	1
GPS2	Amp_6p22.3	0.353	1
MIPOL1	Amp_6p22.3	0.353	1
NF1	Del_22q13.32	0.353	1
FAT1	Del_22q13.32	0.353	1
PPARG	5p-Amp	0.353	1
CDKN1A	ERBB2	0.354	1
ERCC2	8p-Del	0.354	1
HIST1H3B	6q-Del	0.354	1
17q-Amp	3q-Amp	0.354	1
17q-Amp	10q-Del	0.354	1
5q-Del	Amp_19q12	0.354	1
6q-Del	Del_1q32.1	0.354	1
ASXL2	4q-Del	0.355	1
DLX6	Del_2q37.1	0.355	1
PARD3	Amp_17q12	0.355	1
PSMC6	Del_8p23.3	0.355	1
STK32B	Del_8p23.3	0.355	1
ZNF773	Del_8p23.3	0.355	1
BTG2	CREBBP	0.356	1
BTG2	Amp_7p21.1	0.356	1
C12orf43	TBC1D12	0.356	1
C12orf43	Del_6q27	0.356	1
C12orf43	Del_11q25	0.356	1
CREBBP	CCNE2	0.356	1
CREBBP	SNRPB	0.356	1
HIST1H2AG	Del_11q25	0.356	1
PKHD1	Amp_11q13.3	0.356	1
PKHD1	Del_10q23.31	0.356	1
PTTG1IP	Del_8p21.3	0.356	1
ATAD5	Amp_3q26.33	0.356	1
CCNE2	Del_6q27	0.356	1
IL10RB	Amp_7p21.1	0.356	1
IL10RB	Del_6q27	0.356	1
IL10RB	Del_11q25	0.356	1
LETMD1	Del_6q27	0.356	1
LETMD1	Del_11q25	0.356	1
PHLDA3	Del_11q25	0.356	1
TAF11	Del_6q27	0.356	1
C3orf70	Del_2q37.1	0.357	1
CDKN2A	Amp_20q11.21	0.357	1
GTF2I	NFE2L2	0.357	1
GTF2I	Amp_11q22.2	0.357	1
NFE2L2	DNAH6	0.357	1
NFE2L3	Del_9p23	0.357	1
PTEN	Del_9p23	0.357	1
RXRA	ITGA4	0.357	1
RXRA	PPARGC1A	0.357	1
SF3B1	TXNIP	0.357	1
TSC1	Amp_22q12.2	0.357	1
EXOSC10	Del_9p23	0.357	1
NEK11	Amp_11q22.2	0.357	1
PPARGC1A	22q-Del	0.357	1
PPARGC1A	Amp_11q22.2	0.357	1
RIPK4	Del_2q37.1	0.357	1
SSH3	16p-Del	0.357	1
SSH3	22q-Del	0.357	1
THRAP3	Del_9p23	0.357	1
TXNIP	22q-Del	0.357	1
TXNIP	Amp_11q22.2	0.357	1
UGP2	20p-Amp	0.357	1
BAP1	Del_9p23	0.357	1
DNAH6	Amp_11q22.2	0.357	1
EPS8	Del_9p23	0.357	1
FUS	Del_22q13.32	0.357	1
Amp_11q13.3	Del_10q23.31	0.357	1
EP300	ERBB3	0.358	1
ERBB3	11p-Del	0.358	1
ZFP36L2	Amp_5p15.33	0.358	1
3p-Amp	Amp_5p15.33	0.358	1
ATM	GLTP	0.359	1
CDKN2A	Amp_19q12	0.359	1
CDKN2A	Del_8p23.3	0.359	1
ERBB2	RHOB	0.359	1
ERBB3	RBM26	0.359	1
GTF2I	Del_2q34	0.359	1
NRAS	Del_4q34.2	0.359	1
PIK3CA	Amp_19q12	0.359	1
RHOB	Amp_19q12	0.359	1
ZBTB47	Del_4q34.2	0.359	1
DNAH6	Del_2q34	0.359	1
HLA-A	Del_4q34.2	0.359	1
CNNM4	Amp_20q11.21	0.36	1
EP300	ADC	0.36	1
ERBB2	RIPK4	0.36	1
GPS2	Amp_20q11.21	0.36	1
PLCXD3	11p-Del	0.36	1
RHOA	Del_8p21.3	0.36	1
ZFP36L1	Amp_12q15	0.36	1
RBP2	11p-Del	0.36	1
SF3B3	18q-Del	0.36	1
TRERF1	Del_14q24.1	0.36	1
11p-Del	Amp_6p22.3	0.36	1
Amp_1p34.2	Del_6p25.3	0.36	1
Amp_8p11.21	Del_2q34	0.36	1
KDM6A	22q-Del	0.361	1
KLF5	Del_10q23.31	0.361	1
KDM5A	15q-Del	0.361	1
NCOA1	Amp_12q15	0.361	1
NCOA1	Amp_13q22.1	0.361	1
ARID1B	Amp_11q13.3	0.361	1
ARID1B	Del_10q23.31	0.361	1
OGDH	Amp_13q22.1	0.361	1
OGDH	Del_6p25.3	0.361	1
7q-Amp	Amp_4p16.3	0.361	1
15q-Del	Amp_4p16.3	0.361	1
9p-Del	Amp_8q22.3	0.361	1
Amp_19q13.43	Del_2q22.1	0.361	1
CFHR4	ARID2	0.362	1
CFHR4	Amp_1p34.2	0.362	1
CTNNB1	CDK12	0.362	1
CTNNB1	14q-Del	0.362	1
CTNNB1	4p-Del	0.362	1
FOXA1	CDK12	0.362	1
FOXA1	14q-Del	0.362	1
FOXA1	4p-Del	0.362	1
HIST1H3B	Amp_10p14	0.362	1
KRAS	14q-Del	0.362	1
KRAS	4p-Del	0.362	1
NFE2L3	14q-Del	0.362	1
PROS1	ZFP36L1	0.362	1
PROS1	Amp_1p34.2	0.362	1
PTEN	4p-Del	0.362	1
RUNX1	CDK12	0.362	1
RUNX1	14q-Del	0.362	1
ZFP36L1	CTCF	0.362	1
ZFP36L1	DPYS	0.362	1
ZFP36L1	MARK2	0.362	1
ZFP36L1	USP28	0.362	1
ZFP36L1	Del_Xp11.3	0.362	1
ARID2	Del_Xp11.3	0.362	1
CASP8	14q-Del	0.362	1
CASP8	4p-Del	0.362	1
CDK12	ZNF750	0.362	1
CDK12	Del_1p36.11	0.362	1
EXOSC10	4p-Del	0.362	1
KDM5A	9q-Del	0.362	1
NCOA1	9q-Del	0.362	1
EPS8	14q-Del	0.362	1
EPS8	4p-Del	0.362	1
OGDH	9q-Del	0.362	1
TMCO4	Amp_10p14	0.362	1
1q-Amp	14q-Del	0.362	1
ATM	Del_11q25	0.363	1
DIAPH2	SHANK1	0.363	1
ELF3	CDK12	0.363	1
IDH1	Del_9p23	0.363	1
METTL3	TRERF1	0.363	1
NFE2L2	Amp_19q13.43	0.363	1
RHOA	CPD	0.363	1
SHANK1	RBM10	0.363	1
MYO16	Amp_19q13.43	0.363	1
NDC80	Amp_3q26.33	0.363	1
RARG	Amp_3q26.33	0.363	1
RARG	Amp_11q13.3	0.363	1
22q-Del	Amp_19q13.43	0.363	1
4p-Del	Amp_17q23.3	0.363	1
FBXW7	Amp_20q11.21	0.364	1
NF2	Amp_19q13.43	0.364	1
HLA-A	Del_8p23.3	0.364	1
17p-Del	Amp_19q13.43	0.364	1
ATM	RB1	0.365	1
ATM	9p-Del	0.365	1
BTG2	Amp_17q23.3	0.365	1
C12orf43	Del_3p14.2	0.365	1
ELF3	NHLRC1	0.365	1
ELF3	LETMD1	0.365	1
ELF3	SCARF2	0.365	1
PIK3CA	Del_11p15.5	0.365	1
ZNF180	Amp_22q12.2	0.365	1
CCNE2	Del_3p14.2	0.365	1
IL10RB	Amp_17q23.3	0.365	1
IL10RB	Del_3p14.2	0.365	1
NAA15	Amp_22q12.2	0.365	1
NDC80	Amp_22q12.2	0.365	1
PHLDA3	Amp_17q23.3	0.365	1
PHLDA3	Del_3p14.2	0.365	1
SNRPB	Amp_17q23.3	0.365	1
TAF11	Amp_17q23.3	0.365	1
TAF11	Del_3p14.2	0.365	1
SCARF2	Amp_17q23.3	0.365	1
SCARF2	Del_3p14.2	0.365	1
CDKN1A	Del_17p12	0.366	1
CSMD3	ARID2	0.366	1
ERBB3	POTEG	0.366	1
STAG2	HSP90AA1	0.366	1
Amp_8p11.21	Del_9p21.3	0.366	1
C3orf70	Del_12p13.1	0.367	1
CNNM4	Del_4q22.1	0.367	1
FBXW7	GNA13	0.367	1
FBXW7	17q-Amp	0.367	1
HRAS	HSP90AA1	0.367	1
HRAS	ASXL1	0.367	1
MIPOL1	Del_4q22.1	0.367	1
PIK3CA	Amp_12q15	0.367	1
PIK3CA	Amp_13q22.1	0.367	1
PKHD1	TMCO4	0.367	1
PKHD1	17q-Amp	0.367	1
PTTG1IP	Del_8p23.3	0.367	1
ACTB	HSP90AA1	0.367	1
ACTB	Del_12p13.1	0.367	1
AGR3	8q-Amp	0.367	1
ATAD5	GNA13	0.367	1
ATAD5	Del_1q32.1	0.367	1
HSP90AA1	RIPK4	0.367	1
HSP90AA1	CUL1	0.367	1
MED13	Del_1q32.1	0.367	1
NKX2-2	Del_4q22.1	0.367	1
RBP2	Del_18q23	0.367	1
SLC9A4	Del_12p13.1	0.367	1
ASXL1	3p-Amp	0.367	1
CUL1	Del_12p13.1	0.367	1
DAZAP1	Del_18q23	0.367	1
CREBBP	SPTAN1	0.368	1
TBC1D12	Amp_7p11.2	0.368	1
TP53	PHLDA3	0.368	1
TP53	SCARF2	0.368	1
SPTAN1	Del_11q25	0.368	1
Amp_7p11.2	Del_6q27	0.368	1
EP300	CDK12	0.369	1
NF2	Amp_1q23.3	0.369	1
PIK3CA	OGDH	0.369	1
CDK12	17p-Del	0.369	1
NDC80	Amp_6p22.3	0.369	1
CNOT3	Amp_1q23.3	0.369	1
ZNF773	Amp_1q23.3	0.369	1
CDKN2A	PKHD1	0.37	1
CDKN2A	Amp_16p13.2	0.37	1
CSMD3	PTEN	0.37	1
CSMD3	EXOSC10	0.37	1
CSMD3	1q-Amp	0.37	1
PKHD1	RHOB	0.37	1
RB1	TBC1D12	0.37	1
RB1	Del_6q27	0.37	1
RHOB	Amp_16p13.2	0.37	1
DNAH6	Del_11p15.5	0.37	1
Amp_8q22.3	Del_11q23.3	0.37	1
ARID1A	BTG2	0.371	1
ARID1A	TGIF2LX	0.371	1
ARID1A	IL10RB	0.371	1
ARID1A	SNRPB	0.371	1
ARID1A	SCARF2	0.371	1
TGIF2LX	Amp_5p15.33	0.371	1
FAT1	NEK11	0.371	1
FAT1	PPARGC1A	0.371	1
ITGA4	Del_11q23.3	0.371	1
PPARGC1A	20q-Amp	0.371	1
PPARGC1A	Del_11q23.3	0.371	1
TXNIP	20q-Amp	0.371	1
ARID1B	11q-Del	0.371	1
ARID1B	Del_19p13.3	0.371	1
7p-Amp	11q-Del	0.371	1
10q-Del	Amp_3p25.2	0.371	1
8p-Del	Del_1q32.1	0.371	1
8p-Del	Del_Xq21.33	0.371	1
CDKN1A	Amp_7p21.1	0.372	1
CFHR4	17p-Del	0.372	1
CREBBP	SLC9A4	0.372	1
CREBBP	3p-Amp	0.372	1
EP300	RBM26	0.372	1
EP300	7q-Amp	0.372	1
EP300	Del_Xp11.3	0.372	1
HRAS	Amp_7p21.1	0.372	1
PROS1	11p-Del	0.372	1
PROS1	17p-Del	0.372	1
SF3B1	Del_2q34	0.372	1
TBC1D12	3p-Amp	0.372	1
ZFP36L2	Amp_7p21.1	0.372	1
ZFP36L2	Del_6q27	0.372	1
ACTB	Del_11q25	0.372	1
CTCF	11p-Del	0.372	1
DENND5B	11p-Del	0.372	1
DLX6	9p-Del	0.372	1
HSP90AA1	Del_9p21.3	0.372	1
MARK2	17p-Del	0.372	1
RIPK4	Del_6q27	0.372	1
SLC9A4	Amp_7p21.1	0.372	1
SLC9A4	Del_11q25	0.372	1
USP28	11p-Del	0.372	1
ZNF185	9p-Del	0.372	1
3p-Amp	Del_6q27	0.372	1
Amp_11q22.2	Del_2q34	0.372	1
ARID1A	TRERF1	0.373	1
GTF2I	PARD3	0.373	1
GTF2I	7p-Amp	0.373	1
KLF5	ITGA4	0.373	1
PPARGC1A	7p-Amp	0.373	1
SSH3	4q-Del	0.373	1
TRERF1	Amp_5p15.33	0.373	1
DNAH6	7p-Amp	0.373	1
DNAH6	4q-Del	0.373	1
5p-Amp	9q-Del	0.373	1
ATM	19q-Amp	0.374	1
CDKN2A	CREBBP	0.374	1
CDKN2A	TBC1D12	0.374	1
CDKN2A	Amp_7p21.1	0.374	1
FOXQ1	PIK3CA	0.374	1
NFE2L3	PIK3CA	0.374	1
NRAS	Del_2q34	0.374	1
PIK3CA	PTEN	0.374	1
PIK3CA	Del_1p36.11	0.374	1
EPHA2	20p-Amp	0.374	1
EPHA2	Del_13q14.2	0.374	1
GLTP	Del_9p21.3	0.374	1
HFM1	Del_13q14.2	0.374	1
HFM1	Del_22q13.32	0.374	1
NAA15	Del_4q34.2	0.374	1
RARG	Del_4q34.2	0.374	1
ZBTB47	Del_2q34	0.374	1
ZBTB47	Del_9p21.3	0.374	1
HLA-A	Del_2q34	0.374	1
OGDH	20p-Amp	0.374	1
OGDH	Del_22q13.32	0.374	1
SPTAN1	Del_8p23.3	0.374	1
Amp_4p16.3	Del_13q14.2	0.374	1
ATM	4q-Del	0.375	1
ERCC2	Amp_3q26.33	0.375	1
ERCC2	Del_10q23.31	0.375	1
HORMAD1	TSC1	0.375	1
KPTN	Amp_1q23.3	0.375	1
TSC1	ZBTB7B	0.375	1
TSC1	STK32B	0.375	1
CDKN2A	DCDC1	0.376	1
CDKN2A	EXOSC10	0.376	1
CDKN2A	1q-Amp	0.376	1
CTNNB1	RHOB	0.376	1
FBXW7	8p-Del	0.376	1
HRAS	Del_9p21.3	0.376	1
RHOB	CASP8	0.376	1
RHOB	CDH1	0.376	1
RHOB	Del_1p36.11	0.376	1
GLTP	Amp_1q23.3	0.376	1
11p-Del	Amp_10p14	0.376	1
17p-Del	Amp_10p14	0.376	1
ASXL2	MIPOL1	0.377	1
ASXL2	ZNF511	0.377	1
CREBBP	17p-Del	0.377	1
PIK3CA	FUS	0.377	1
SF1	Amp_17q12	0.377	1
TBC1D12	11p-Del	0.377	1
ZNF511	Amp_17q12	0.377	1
11p-Del	Amp_7p21.1	0.377	1
ERBB2	Amp_19q13.43	0.378	1
ERCC2	Amp_13q22.1	0.378	1
RHOA	Amp_7p11.2	0.378	1
DENND5B	Amp_6p22.3	0.378	1
GNA13	Del_9p21.3	0.378	1
ATM	Del_10q23.31	0.379	1
FGFR3	Amp_20q11.21	0.379	1
NF1	17q-Amp	0.379	1
RB1	11q-Del	0.379	1
RPTN	Amp_20q11.21	0.379	1
9p-Del	Del_13q14.2	0.379	1
9q-Del	Amp_22q12.2	0.379	1
CSMD3	Amp_12q15	0.38	1
CSMD3	Del_16q23.1	0.38	1
SF3B1	TSC1	0.38	1
TSC1	22q-Del	0.38	1
TSC1	Amp_11q22.2	0.38	1
EPHA2	OGDH	0.38	1
CTNNB1	Del_16p13.3	0.381	1
DIAPH2	Amp_3p25.2	0.381	1
FGFR3	KRAS	0.381	1
FGFR3	DCDC1	0.381	1
FGFR3	ZNF750	0.381	1
FGFR3	EPS8	0.381	1
FOXA1	Del_8p21.3	0.381	1
FOXA1	Del_16p13.3	0.381	1
METTL3	7q-Amp	0.381	1
NFE2L2	ZNF180	0.381	1
NFE2L2	NAA15	0.381	1
NFE2L2	Amp_4q13.3	0.381	1
NFE2L3	Del_8p21.3	0.381	1
PTEN	Del_8p21.3	0.381	1
RHOA	RBM26	0.381	1
RPTN	RXRA	0.381	1
RPTN	SF3B1	0.381	1
RUNX1	Amp_8p11.23	0.381	1
RUNX1	Del_16p13.3	0.381	1
RXRA	DDX3X	0.381	1
RXRA	Del_7q36.3	0.381	1
SF3B1	ZNF180	0.381	1
SF3B1	NDC80	0.381	1
SF3B1	Del_7q36.3	0.381	1
SHANK1	DENND5B	0.381	1
SHANK1	RBM26	0.381	1
SHANK1	15q-Del	0.381	1
STAG2	IKZF2	0.381	1
STAG2	ZNF750	0.381	1
TP53	18q-Del	0.381	1
ZNF180	22q-Del	0.381	1
ZNF180	Amp_11q22.2	0.381	1
CASP8	Del_16p13.3	0.381	1
EXOSC10	Amp_8p11.23	0.381	1
MYO16	19q-Amp	0.381	1
MYO16	Del_7q36.3	0.381	1
NAA15	Amp_11q22.2	0.381	1
NDC80	Amp_11q22.2	0.381	1
RARG	Amp_11q22.2	0.381	1
RBM10	Amp_3p25.2	0.381	1
THRAP3	Del_8p21.3	0.381	1
THRAP3	Del_16p13.3	0.381	1
CDH1	Amp_8p11.23	0.381	1
GNA13	9q-Del	0.381	1
1q-Amp	Del_8p21.3	0.381	1
7p-Amp	Del_9p23	0.381	1
Amp_4q13.3	Amp_11q22.2	0.381	1
BTG2	Amp_7p11.2	0.382	1
C12orf43	Amp_7p11.2	0.382	1
FGFR3	ARID2	0.382	1
GPS2	TP53	0.382	1
NRAS	Del_11q23.3	0.382	1
STAG2	ARID2	0.382	1
ARID2	Del_16p13.3	0.382	1
CCNE2	Amp_7p11.2	0.382	1
FAT1	GLTP	0.382	1
FAT1	ZBTB47	0.382	1
FAT1	HLA-A	0.382	1
GLTP	Del_11q23.3	0.382	1
SNRPB	SPTAN1	0.382	1
SNRPB	Amp_7p11.2	0.382	1
TAF11	SPTAN1	0.382	1
USP28	8q-Amp	0.382	1
ZBTB47	20q-Amp	0.382	1
ZBTB47	Del_11q23.3	0.382	1
SCARF2	SPTAN1	0.382	1
SPTAN1	19p-Del	0.382	1
UNC93B1	20q-Amp	0.382	1
19p-Del	Amp_7p11.2	0.382	1
GTF2I	Del_2q22.1	0.383	1
PKHD1	Del_14q24.1	0.383	1
ITGA4	Del_2q22.1	0.383	1
SSH3	Del_2q22.1	0.383	1
TXNIP	Del_2q22.1	0.383	1
DNAH6	Del_2q22.1	0.383	1
5p-Amp	Amp_1q23.3	0.383	1
8q-Amp	14q-Del	0.383	1
C3orf70	DIAPH2	0.384	1
CSMD3	20q-Amp	0.384	1
DIAPH2	HRAS	0.384	1
DIAPH2	ACTB	0.384	1
DIAPH2	SLC9A4	0.384	1
DIAPH2	3p-Amp	0.384	1
GPS2	Amp_3p25.2	0.384	1
HRAS	RBM10	0.384	1
HRAS	SF3B3	0.384	1
HRAS	TRERF1	0.384	1
HRAS	CNOT1	0.384	1
HRAS	FAM47C	0.384	1
ZFP36L2	RBM10	0.384	1
ACTB	SF3B3	0.384	1
ACTB	TRERF1	0.384	1
ACTB	CNOT1	0.384	1
ACTB	FAM47C	0.384	1
CPD	CUL1	0.384	1
CPD	3p-Amp	0.384	1
RBM10	RIPK4	0.384	1
RBM10	CUL1	0.384	1
SF3B3	3p-Amp	0.384	1
SLC9A4	TRERF1	0.384	1
SLC9A4	FAM47C	0.384	1
FAM47C	3p-Amp	0.384	1
C3orf70	Amp_17q23.3	0.385	1
ELF3	HRAS	0.385	1
ELF3	ZFP36L2	0.385	1
ELF3	ZNF626	0.385	1
HRAS	Amp_17q23.3	0.385	1
IDH1	18q-Del	0.385	1
IDH1	Del_14q24.1	0.385	1
POTEG	18q-Del	0.385	1
PSIP1	Del_18q23	0.385	1
SARNP	18q-Del	0.385	1
ZNF486	18q-Del	0.385	1
ACTB	Amp_17q23.3	0.385	1
ACTB	Del_3p14.2	0.385	1
UGP2	18q-Del	0.385	1
8q-Amp	15q-Del	0.385	1
ATM	Del_3p14.2	0.386	1
KLF5	RB1	0.386	1
RB1	ZBTB7B	0.386	1
RB1	PARD3	0.386	1
ZBTB7B	9p-Del	0.386	1
ACTB	Del_17p12	0.386	1
FAT1	9q-Del	0.386	1
NCOA1	5p-Amp	0.386	1
PSMC6	9p-Del	0.386	1
STK32B	9p-Del	0.386	1
CNOT3	9p-Del	0.386	1
CUL1	Del_17p12	0.386	1
7p-Amp	9p-Del	0.386	1
9p-Del	Amp_6q21	0.386	1
Amp_6p22.3	Del_18q23	0.386	1
CSMD3	RBM10	0.387	1
CSMD3	ADC	0.387	1
CSMD3	DAZAP1	0.387	1
NF2	3q-Amp	0.387	1
NF2	Del_15q13.1	0.387	1
NFE2L2	20q-Amp	0.387	1
SF3B1	20q-Amp	0.387	1
SF3B1	Del_11q23.3	0.387	1
ZBTB7B	3q-Amp	0.387	1
ZBTB7B	10q-Del	0.387	1
ZBTB7B	Del_15q13.1	0.387	1
ARID2	4p-Del	0.387	1
FAT1	MYO16	0.387	1
FAT1	16p-Del	0.387	1
FAT1	Del_2q37.1	0.387	1
PSMC6	3q-Amp	0.387	1
STK32B	3q-Amp	0.387	1
STK32B	6q-Del	0.387	1
CNOT3	10q-Del	0.387	1
CNOT3	6q-Del	0.387	1
CNOT3	Del_15q13.1	0.387	1
ZNF773	3q-Amp	0.387	1
ZNF773	6q-Del	0.387	1
11q-Del	Amp_6p22.3	0.387	1
4p-Del	Amp_1p34.2	0.387	1
Del_2q34	Del_9p21.3	0.387	1
CDKN1A	CNNM4	0.388	1
CDKN1A	MIPOL1	0.388	1
CDKN1A	TFG	0.388	1
GPS2	Del_19p13.3	0.388	1
HRAS	RB1	0.388	1
MIPOL1	11q-Del	0.388	1
RB1	ACTB	0.388	1
SF1	11q-Del	0.388	1
ZFP36L2	9p-Del	0.388	1
NKX2-2	11q-Del	0.388	1
NKX2-2	5q-Del	0.388	1
TFG	11q-Del	0.388	1
TFG	5q-Del	0.388	1
TFG	Del_19p13.3	0.388	1
ZNF626	9p-Del	0.388	1
Amp_10p14	Amp_11q22.2	0.388	1
ELF3	Amp_7p11.2	0.389	1
Amp_12q15	Del_17p12	0.389	1
CDKN1A	Del_3p14.2	0.39	1
CFHR4	14q-Del	0.39	1
CFHR4	4p-Del	0.39	1
CREBBP	Del_16q23.1	0.39	1
KDM6A	Amp_7p21.1	0.39	1
RHOA	8p-Del	0.39	1
CDK12	MBD1	0.39	1
CDK12	PPARG	0.39	1
CDK12	Del_Xp11.3	0.39	1
CTCF	4p-Del	0.39	1
GLTP	Amp_8p11.21	0.39	1
NEK11	Del_12p13.1	0.39	1
PARD3	Amp_8q22.3	0.39	1
PPARG	4p-Del	0.39	1
UBA52	Amp_8p11.21	0.39	1
USP28	4p-Del	0.39	1
ZBTB47	Amp_8p11.21	0.39	1
DNAH6	Del_12p13.1	0.39	1
FUT5	Amp_10p14	0.39	1
HLA-A	Amp_8p11.21	0.39	1
4q-Del	Amp_8q22.3	0.39	1
Del_11q25	Del_16q23.1	0.39	1
BTG2	Amp_12q15	0.391	1
BTG2	Amp_13q22.1	0.391	1
C12orf43	Amp_12q15	0.391	1
FOXQ1	Amp_22q12.2	0.391	1
GPR50	Amp_22q12.2	0.391	1
HIST1H2AG	Amp_12q15	0.391	1
HIST1H2AG	Del_17p12	0.391	1
KRAS	Amp_22q12.2	0.391	1
NHLRC1	Amp_12q15	0.391	1
NHLRC1	Del_6p25.3	0.391	1
NHLRC1	Del_17p12	0.391	1
PKHD1	9q-Del	0.391	1
CCNE2	Del_17p12	0.391	1
CPD	Del_4q22.1	0.391	1
DCDC1	Amp_22q12.2	0.391	1
IKZF2	Amp_22q12.2	0.391	1
IL10RB	Amp_13q22.1	0.391	1
MED13	9q-Del	0.391	1
PHLDA3	Amp_12q15	0.391	1
PHLDA3	Del_16q23.1	0.391	1
PHLDA3	Del_17p12	0.391	1
SNRPB	Del_16q23.1	0.391	1
TAF11	Amp_13q22.1	0.391	1
TAF11	Del_16q23.1	0.391	1
TAF11	Del_17p12	0.391	1
TRERF1	Del_4q22.1	0.391	1
ZNF750	Amp_22q12.2	0.391	1
CDH1	Amp_22q12.2	0.391	1
SCARF2	Amp_13q22.1	0.391	1
5p-Amp	6q-Del	0.391	1
19p-Del	Amp_12q15	0.391	1
19p-Del	Del_6p25.3	0.391	1
9q-Del	Amp_16p13.2	0.391	1
ARID1A	Amp_3q26.33	0.392	1
ASXL2	STAG2	0.392	1
ASXL2	Del_16p13.3	0.392	1
CNNM4	Del_11p15.5	0.392	1
RHOA	Amp_13q22.1	0.392	1
RHOA	Del_6p25.3	0.392	1
TP53	TMCO4	0.392	1
TP53	17q-Amp	0.392	1
TP53	Del_Xq21.33	0.392	1
ZFP36L1	TMCO4	0.392	1
ZFP36L1	Del_Xq21.33	0.392	1
ARID2	TMCO4	0.392	1
ARID2	17q-Amp	0.392	1
SF3B3	Del_11p15.5	0.392	1
CNOT1	Del_11p15.5	0.392	1
Amp_1p34.2	Del_1q32.1	0.392	1
Amp_8p11.23	Amp_17q12	0.392	1
Amp_17q12	Del_16p13.3	0.392	1
ATM	11p-Del	0.393	1
EP300	TSC1	0.393	1
KDM6A	Amp_12q15	0.393	1
ZFP36L1	Amp_5p15.33	0.393	1
ARID2	Amp_5p15.33	0.393	1
ATAD5	Amp_22q12.2	0.393	1
HSP90AA1	Amp_3q26.33	0.393	1
HSP90AA1	Amp_11q13.3	0.393	1
HSP90AA1	Del_10q23.31	0.393	1
ASXL1	Amp_11q13.3	0.393	1
FGFR3	PLCXD3	0.394	1
FGFR3	RBP2	0.394	1
PLCXD3	STAG2	0.394	1
STAG2	RBP2	0.394	1
STAG2	ADC	0.394	1
AGR3	Amp_8p11.23	0.394	1
CPD	Del_8p21.3	0.394	1
RBP2	Del_16p13.3	0.394	1
CNOT1	Del_8p21.3	0.394	1
DAZAP1	Amp_8p11.23	0.394	1
FAM47C	Del_8p21.3	0.394	1
10q-Del	Del_9p23	0.394	1
CDKN1A	Amp_19q13.43	0.395	1
CDKN2A	Amp_3p25.2	0.395	1
ERCC2	FUS	0.395	1
GTF2I	Amp_19q12	0.395	1
RHOA	Del_9p23	0.395	1
SHANK1	Del_9p23	0.395	1
ARID2	Del_9p21.3	0.395	1
FAT1	6q-Del	0.395	1
FAT1	Del_15q13.1	0.395	1
PPARGC1A	Amp_19q12	0.395	1
TXNIP	Amp_19q12	0.395	1
Amp_1p34.2	Del_9p21.3	0.395	1
RARG	Del_2q34	0.396	1
ASXL1	5q-Del	0.396	1
FUT5	8p-Del	0.396	1
ZNF185	8p-Del	0.396	1
Amp_5p15.33	Del_1q32.1	0.396	1
ELF3	Amp_8q22.3	0.397	1
KLF5	RPTN	0.397	1
KLF5	NDC80	0.397	1
KLF5	19q-Amp	0.397	1
RB1	Amp_17q23.3	0.397	1
RPTN	PARD3	0.397	1
RPTN	ARID1B	0.397	1
NAA15	7p-Amp	0.397	1
NAA15	4q-Del	0.397	1
NDC80	ARID1B	0.397	1
RARG	4q-Del	0.397	1
ARID1B	19q-Amp	0.397	1
ARID1B	Del_7q36.3	0.397	1
19q-Amp	4q-Del	0.397	1
7p-Amp	Amp_4q13.3	0.397	1
4q-Del	Amp_4q13.3	0.397	1
CREBBP	Del_17p12	0.398	1
ERBB2	NRAS	0.398	1
ERBB2	GLTP	0.398	1
ERCC2	20p-Amp	0.398	1
NFE2L2	Del_15q13.1	0.398	1
ZBTB47	Amp_19q12	0.398	1
3q-Amp	22q-Del	0.398	1
6q-Del	Amp_11q22.2	0.398	1
FBXW7	PSMC6	0.399	1
FBXW7	Amp_6q21	0.399	1
FGFR3	Del_16q23.1	0.399	1
GPS2	Amp_19q13.43	0.399	1
NF2	PKHD1	0.399	1
PKHD1	STK32B	0.399	1
ZBTB7B	Amp_16p13.2	0.399	1
ZNF511	Amp_19q13.43	0.399	1
MED13	Amp_6q21	0.399	1
PSMC6	Amp_16p13.2	0.399	1
CNOT3	Amp_16p13.2	0.399	1
GNA13	5p-Amp	0.399	1
ZNF773	Amp_16p13.2	0.399	1
C12orf43	Del_22q13.32	0.4	1
COPZ2	KDM6A	0.4	1
DIAPH2	FGFR3	0.4	1
FGFR3	RBM10	0.4	1
HIST1H2AG	20p-Amp	0.4	1
KDM6A	KPTN	0.4	1
NHLRC1	20p-Amp	0.4	1
NHLRC1	Del_22q13.32	0.4	1
STAG2	FAM47C	0.4	1
TGIF2LX	20p-Amp	0.4	1
CCNE2	Del_22q13.32	0.4	1
CDKN2AIPNL	Amp_20q11.21	0.4	1
CPD	Amp_8p11.23	0.4	1
IL10RB	Del_22q13.32	0.4	1
TAF11	Del_22q13.32	0.4	1
SCARF2	Del_22q13.32	0.4	1
Amp_7p11.2	Del_2q37.1	0.4	1
EP300	RHOB	0.401	1
GTF2I	Del_2q37.1	0.401	1
METTL3	Amp_4p16.3	0.401	1
NFE2L2	8p-Del	0.401	1
RHOA	NCOA1	0.401	1
SHANK1	Amp_4p16.3	0.401	1
ASXL2	Amp_8q22.3	0.402	1
CDKN1A	CSMD3	0.402	1
CTNNB1	Amp_3q26.33	0.402	1
FOXA1	Amp_3q26.33	0.402	1
FOXA1	Amp_11q13.3	0.402	1
GPR50	Del_10q23.31	0.402	1
KRAS	Amp_11q13.3	0.402	1
METTL3	Del_5q12.1	0.402	1
NFE2L3	Amp_3q26.33	0.402	1
PTEN	Amp_3q26.33	0.402	1
PTEN	Amp_11q13.3	0.402	1
RHOA	9q-Del	0.402	1
RHOA	Del_5q12.1	0.402	1
RUNX1	Amp_11q13.3	0.402	1
RUNX1	Del_10q23.31	0.402	1
RXRA	Amp_8p11.21	0.402	1
CASP8	Amp_3q26.33	0.402	1
CASP8	Amp_11q13.3	0.402	1
EXOSC10	Amp_3q26.33	0.402	1
IKZF2	Amp_3q26.33	0.402	1
MYO16	Amp_8p11.21	0.402	1
THRAP3	Amp_3q26.33	0.402	1
ZNF750	Amp_3q26.33	0.402	1
BAP1	Amp_3q26.33	0.402	1
BAP1	Del_10q23.31	0.402	1
CDH1	Amp_3q26.33	0.402	1
EPS8	Amp_3q26.33	0.402	1
ZNF185	9q-Del	0.402	1
ZNF185	Del_5q12.1	0.402	1
Amp_11q13.3	Del_1p36.11	0.402	1
Amp_11q22.2	Del_2q22.1	0.402	1
C3orf70	7q-Amp	0.403	1
ERBB3	Del_9p21.3	0.403	1
HRAS	RBM26	0.403	1
HRAS	7q-Amp	0.403	1
HRAS	15q-Del	0.403	1
PSIP1	3p-Amp	0.403	1
ZFP36L2	7q-Amp	0.403	1
ACTB	RBM26	0.403	1
ACTB	7q-Amp	0.403	1
DENND5B	RIPK4	0.403	1
RBM26	CUL1	0.403	1
RBM26	3p-Amp	0.403	1
RIPK4	15q-Del	0.403	1
ARID1B	Del_2q34	0.403	1
CUL1	7q-Amp	0.403	1
Amp_11q22.2	Del_9p21.3	0.403	1
Amp_19q12	Del_11q23.3	0.403	1
CDKN2A	PROS1	0.404	1
RHOB	PPARG	0.404	1
RHOB	Del_Xp11.3	0.404	1
TSC1	Amp_19q12	0.404	1
CSMD3	20p-Amp	0.405	1
DIAPH2	Del_17p12	0.405	1
FBXW7	Del_2q34	0.405	1
FOXA1	Del_8p23.3	0.405	1
KLF5	TSC1	0.405	1
METTL3	20p-Amp	0.405	1
NFE2L3	Del_8p23.3	0.405	1
PKHD1	Del_2q34	0.405	1
TSC1	PARD3	0.405	1
TSC1	7p-Amp	0.405	1
CNOT1	Del_17p12	0.405	1
ASXL2	FAM47C	0.406	1
CREBBP	GLTP	0.406	1
CREBBP	HLA-A	0.406	1
DIAPH2	Amp_17q12	0.406	1
FBXW7	Amp_3p25.2	0.406	1
IDH1	Del_4q22.1	0.406	1
NRAS	TBC1D12	0.406	1
NRAS	Amp_7p21.1	0.406	1
NRAS	Del_6q27	0.406	1
NRAS	Del_11q25	0.406	1
PKHD1	Del_13q14.2	0.406	1
POTEG	Amp_1q21.3	0.406	1
TBC1D12	UNC93B1	0.406	1
CPD	Amp_17q12	0.406	1
GLTP	Del_11q25	0.406	1
RBM10	Amp_17q12	0.406	1
UBA52	Amp_7p21.1	0.406	1
UGP2	Amp_1q21.3	0.406	1
ZBTB47	Del_6q27	0.406	1
ZBTB47	Del_11q25	0.406	1
CNOT1	Amp_17q12	0.406	1
FAM47C	Amp_17q12	0.406	1
FUS	Amp_1q21.3	0.406	1
HLA-A	Del_6q27	0.406	1
HLA-A	Del_11q25	0.406	1
UNC93B1	Amp_7p21.1	0.406	1
UNC93B1	Del_6q27	0.406	1
9q-Del	Amp_13q22.1	0.406	1
ATM	Del_12p13.1	0.407	1
CREBBP	ITGA4	0.407	1
CREBBP	NEK11	0.407	1
CREBBP	SSH3	0.407	1
CTNNB1	NFE2L2	0.407	1
CTNNB1	22q-Del	0.407	1
DIAPH2	SSH3	0.407	1
FGFR3	Del_8p21.3	0.407	1
FOXA1	RXRA	0.407	1
FOXA1	MYO16	0.407	1
FOXA1	Amp_11q22.2	0.407	1
FOXQ1	16p-Del	0.407	1
FOXQ1	22q-Del	0.407	1
GPR50	NFE2L2	0.407	1
GPR50	RXRA	0.407	1
GPR50	22q-Del	0.407	1
GTF2I	SF3B3	0.407	1
GTF2I	FAM47C	0.407	1
KRAS	22q-Del	0.407	1
NF1	18q-Del	0.407	1
NFE2L2	RUNX1	0.407	1
NFE2L2	DCDC1	0.407	1
NFE2L2	EXOSC10	0.407	1
NFE2L2	IKZF2	0.407	1
NFE2L2	THRAP3	0.407	1
NFE2L2	WAC	0.407	1
NFE2L2	ZNF750	0.407	1
NFE2L2	BAP1	0.407	1
NFE2L2	EPS8	0.407	1
NFE2L3	SF3B1	0.407	1
RUNX1	SF3B1	0.407	1
RUNX1	22q-Del	0.407	1
RXRA	CASP8	0.407	1
RXRA	DCDC1	0.407	1
RXRA	EXOSC10	0.407	1
RXRA	ZNF750	0.407	1
RXRA	BAP1	0.407	1
RXRA	1q-Amp	0.407	1
RXRA	Del_1p36.11	0.407	1
SF3B1	CASP8	0.407	1
SF3B1	WAC	0.407	1
SF3B1	BAP1	0.407	1
SF3B1	CDH1	0.407	1
SF3B1	1q-Amp	0.407	1
CASP8	16p-Del	0.407	1
CASP8	22q-Del	0.407	1
CASP8	Amp_11q22.2	0.407	1
CPD	TXNIP	0.407	1
IKZF2	Amp_11q22.2	0.407	1
ITGA4	Del_11q25	0.407	1
MYO16	WAC	0.407	1
MYO16	1q-Amp	0.407	1
NEK11	FAM47C	0.407	1
PPARGC1A	Del_6q27	0.407	1
PPARGC1A	Del_11q25	0.407	1
RBM10	DNAH6	0.407	1
SF3B3	DNAH6	0.407	1
SSH3	Del_6q27	0.407	1
THRAP3	16p-Del	0.407	1
THRAP3	Amp_11q22.2	0.407	1
ZNF750	22q-Del	0.407	1
ZNF750	Amp_11q22.2	0.407	1
BAP1	Amp_11q22.2	0.407	1
CDH1	22q-Del	0.407	1
EPS8	22q-Del	0.407	1
EPS8	Amp_11q22.2	0.407	1
CDKN2A	Del_11p15.5	0.408	1
PLCXD3	Amp_11q13.3	0.408	1
RPTN	20q-Amp	0.408	1
RPTN	Del_11q23.3	0.408	1
AGR3	Amp_3q26.33	0.408	1
DDX3X	20q-Amp	0.408	1
DLX6	Del_13q14.2	0.408	1
FAT1	Del_7q36.3	0.408	1
PPARGC1A	Amp_8q22.3	0.408	1
RBP2	Amp_11q13.3	0.408	1
RBP2	Del_10q23.31	0.408	1
SSH3	Amp_8q22.3	0.408	1
ADC	Amp_3q26.33	0.408	1
ADC	Del_10q23.31	0.408	1
DNAH6	Amp_8q22.3	0.408	1
Amp_4q13.3	Del_11q23.3	0.408	1
CDKN2A	Amp_1p34.2	0.409	1
PIK3CA	Del_5q12.1	0.409	1
RHOB	ZFP36L1	0.409	1
TSC1	8q-Amp	0.409	1
CDK12	Del_9p23	0.409	1
ERBB3	IL10RB	0.41	1
ERBB3	LETMD1	0.41	1
ERBB3	SNRPB	0.41	1
ERBB3	TAF11	0.41	1
ERBB3	19p-Del	0.41	1
KDM5A	17p-Del	0.41	1
OGDH	17p-Del	0.41	1
ARID1A	NEK11	0.411	1
ARID1A	TXNIP	0.411	1
CNNM4	TSC1	0.411	1
CSMD3	9p-Del	0.411	1
ELF3	Del_6p25.3	0.411	1
FOXA1	Amp_1q21.3	0.411	1
HRAS	Amp_7p11.2	0.411	1
KRAS	Amp_1q21.3	0.411	1
NFE2L3	Amp_1q21.3	0.411	1
PTEN	Amp_1q21.3	0.411	1
DCDC1	Amp_1q21.3	0.411	1
ITGA4	Amp_5p15.33	0.411	1
PPARGC1A	Amp_5p15.33	0.411	1
RIPK4	Amp_7p11.2	0.411	1
SLC9A4	Amp_7p11.2	0.411	1
SSH3	Amp_5p15.33	0.411	1
TXNIP	Amp_5p15.33	0.411	1
ZNF626	Amp_7p11.2	0.411	1
EPS8	Amp_1q21.3	0.411	1
NF1	Amp_6q21	0.412	1
CDK12	Amp_12q15	0.412	1
CDK12	Amp_13q22.1	0.412	1
DPYS	Del_9p23	0.412	1
14q-Del	Amp_12q15	0.412	1
14q-Del	Del_16q23.1	0.412	1
4p-Del	Amp_12q15	0.412	1
ATM	FOXQ1	0.413	1
ATM	GPR50	0.413	1
ATM	WAC	0.413	1
ATM	Del_1p36.11	0.413	1
CREBBP	20p-Amp	0.413	1
CSMD3	MBD1	0.413	1
CSMD3	USP28	0.413	1
KDM6A	DDX3X	0.413	1
KDM6A	Amp_4q13.3	0.413	1
KDM6A	Del_7q36.3	0.413	1
KRAS	Del_4q34.2	0.413	1
ZFP36L1	Amp_3q26.33	0.413	1
ARID2	Amp_3q26.33	0.413	1
ARID2	Amp_11q13.3	0.413	1
ARID2	Del_10q23.31	0.413	1
HSP90AA1	Amp_19q13.43	0.413	1
STK32B	Amp_10p14	0.413	1
ZNF750	Del_4q34.2	0.413	1
ASXL1	Amp_19q13.43	0.413	1
CNOT3	Amp_10p14	0.413	1
20p-Amp	Del_11q25	0.413	1
8p-Del	Amp_17q12	0.413	1
ELF3	UNC93B1	0.414	1
HORMAD1	KDM6A	0.414	1
KDM6A	STK32B	0.414	1
SF3B1	9q-Del	0.414	1
SF3B1	Del_5q12.1	0.414	1
ZNF180	ASXL1	0.414	1
DLX6	5p-Amp	0.414	1
GLTP	Amp_17q23.3	0.414	1
HSP90AA1	19q-Amp	0.414	1
NDC80	ASXL1	0.414	1
UBA52	Del_3p14.2	0.414	1
ZBTB47	Amp_17q23.3	0.414	1
ZBTB47	Del_3p14.2	0.414	1
ASXL1	19q-Amp	0.414	1
FUT5	5p-Amp	0.414	1
HLA-A	Del_3p14.2	0.414	1
UNC93B1	Del_3p14.2	0.414	1
ZNF185	5p-Amp	0.414	1
19q-Amp	Del_12p13.1	0.414	1
Amp_11q22.2	Del_5q12.1	0.414	1
ZFP36L1	Amp_1q23.3	0.415	1
18q-Del	Amp_8q22.3	0.415	1
ASXL2	UGP2	0.416	1
ATM	DAZAP1	0.416	1
MIPOL1	Del_2q37.1	0.416	1
NFE2L2	PKHD1	0.416	1
NFE2L2	MED13	0.416	1
PIK3CA	RHOA	0.416	1
PKHD1	16p-Del	0.416	1
PKHD1	22q-Del	0.416	1
RXRA	Amp_16p13.2	0.416	1
SF3B1	MED13	0.416	1
TSC1	11q-Del	0.416	1
AGR3	Del_4q34.2	0.416	1
ATAD5	16p-Del	0.416	1
ATAD5	Amp_11q22.2	0.416	1
MED13	16p-Del	0.416	1
MED13	22q-Del	0.416	1
UGP2	Amp_17q12	0.416	1
ADC	Del_4q34.2	0.416	1
ERBB2	RXRA	0.417	1
ERBB2	16p-Del	0.417	1
ERBB2	22q-Del	0.417	1
KDM6A	Amp_6p22.3	0.417	1
KDM5A	18q-Del	0.417	1
MYO16	Amp_19q12	0.417	1
NCOA1	18q-Del	0.417	1
18q-Del	Amp_4p16.3	0.417	1
ASXL2	Del_15q13.1	0.418	1
ELF3	Amp_22q12.2	0.418	1
EP300	GNA13	0.418	1
PSIP1	Del_4q22.1	0.418	1
FAT1	4q-Del	0.418	1
RIPK4	Del_8p21.3	0.418	1
5p-Amp	Amp_1q21.3	0.418	1
10q-Del	Amp_17q12	0.418	1
CDKN1A	STAG2	0.419	1
CFHR4	Amp_22q12.2	0.419	1
ERBB3	ERCC2	0.419	1
ERBB3	RHOA	0.419	1
TP53	15q-Del	0.419	1
CTCF	Amp_22q12.2	0.419	1
PPARG	Amp_22q12.2	0.419	1
17q-Amp	4p-Del	0.419	1
4p-Del	Del_1q32.1	0.419	1
CTNNB1	Del_9p21.3	0.42	1
ELF3	DNAH6	0.42	1
KRAS	Amp_6p22.3	0.42	1
NFE2L3	Amp_6p22.3	0.42	1
PTEN	Del_9p21.3	0.42	1
RUNX1	Del_9p21.3	0.42	1
ZNF180	Amp_8p11.21	0.42	1
CASP8	Amp_6p22.3	0.42	1
NAA15	Amp_8p11.21	0.42	1
RARG	Del_2q22.1	0.42	1
THRAP3	Amp_6p22.3	0.42	1
TXNIP	Amp_17q23.3	0.42	1
ZNF750	Del_9p21.3	0.42	1
BAP1	Del_9p21.3	0.42	1
DNAH6	Del_3p14.2	0.42	1
19q-Amp	Del_2q22.1	0.42	1
1q-Amp	Amp_6p22.3	0.42	1
8p-Del	Amp_11q13.3	0.42	1
ARID1A	PSIP1	0.421	1
ARID1A	DENND5B	0.421	1
ARID1A	Del_2q22.1	0.421	1
FBXW7	Del_4q22.1	0.421	1
HRAS	Amp_10p14	0.421	1
PKHD1	Del_4q22.1	0.421	1
ZFP36L2	Amp_10p14	0.421	1
ACTB	Amp_10p14	0.421	1
DENND5B	Amp_5p15.33	0.421	1
CUL1	Amp_10p14	0.421	1
ARID1A	Del_17p12	0.422	1
CNNM4	3q-Amp	0.422	1
CNNM4	10q-Del	0.422	1
GPS2	6q-Del	0.422	1
GPS2	Del_15q13.1	0.422	1
HRAS	HFM1	0.422	1
HRAS	OGDH	0.422	1
HRAS	Amp_4p16.3	0.422	1
KLF5	3q-Amp	0.422	1
KLF5	Del_15q13.1	0.422	1
MIPOL1	3q-Amp	0.422	1
MIPOL1	6q-Del	0.422	1
NFE2L3	Amp_1q23.3	0.422	1
PKHD1	Del_11q23.3	0.422	1
SF1	3q-Amp	0.422	1
SF1	6q-Del	0.422	1
ZBTB7B	8p-Del	0.422	1
ZFP36L2	EPHA2	0.422	1
ZNF511	10q-Del	0.422	1
ZNF511	6q-Del	0.422	1
ZNF511	Del_15q13.1	0.422	1
ACTB	HFM1	0.422	1
ACTB	Amp_4p16.3	0.422	1
ATAD5	Del_11q23.3	0.422	1
DCDC1	Amp_1q23.3	0.422	1
EPHA2	ZNF626	0.422	1
HFM1	3p-Amp	0.422	1
HFM1	8q-Amp	0.422	1
HFM1	Del_18q23	0.422	1
KDM5A	ZNF626	0.422	1
KDM5A	3p-Amp	0.422	1
KDM5A	Del_18q23	0.422	1
NCOA1	8q-Amp	0.422	1
NKX2-2	10q-Del	0.422	1
NKX2-2	6q-Del	0.422	1
PARD3	10q-Del	0.422	1
PSMC6	8p-Del	0.422	1
SLC9A4	OGDH	0.422	1
SLC9A4	Amp_4p16.3	0.422	1
STK32B	8p-Del	0.422	1
UGP2	Amp_20q11.21	0.422	1
ZNF626	OGDH	0.422	1
ZNF626	Amp_4p16.3	0.422	1
ZNF750	Amp_1q23.3	0.422	1
ARID1B	10q-Del	0.422	1
ARID1B	Del_15q13.1	0.422	1
CUL1	OGDH	0.422	1
OGDH	3p-Amp	0.422	1
8q-Amp	8p-Del	0.422	1
Amp_4p16.3	Del_18q23	0.422	1
Amp_16p13.2	Del_11q23.3	0.422	1
CDKN1A	DIAPH2	0.423	1
CDKN1A	CPD	0.423	1
CDKN1A	TRERF1	0.423	1
CDKN1A	FAM47C	0.423	1
CFHR4	FGFR3	0.423	1
CSMD3	DENND5B	0.423	1
CSMD3	7q-Amp	0.423	1
CTNNB1	4q-Del	0.423	1
DIAPH2	11q-Del	0.423	1
DIAPH2	Del_19p13.3	0.423	1
FGFR3	CTCF	0.423	1
FGFR3	MARK2	0.423	1
FGFR3	MBD1	0.423	1
FGFR3	USP28	0.423	1
FOXA1	ARID1B	0.423	1
FOXA1	4q-Del	0.423	1
GPR50	KLF5	0.423	1
KLF5	NFE2L3	0.423	1
KLF5	PTEN	0.423	1
KLF5	RUNX1	0.423	1
KLF5	EXOSC10	0.423	1
KLF5	ZNF750	0.423	1
KLF5	Del_1p36.11	0.423	1
KRAS	7p-Amp	0.423	1
NF1	9q-Del	0.423	1
PROS1	Del_16p13.3	0.423	1
PTEN	PARD3	0.423	1
PTEN	ARID1B	0.423	1
RUNX1	ARID1B	0.423	1
RUNX1	7p-Amp	0.423	1
STAG2	Del_Xp11.3	0.423	1
TP53	ASXL1	0.423	1
CASP8	4q-Del	0.423	1
EXOSC10	7p-Amp	0.423	1
IKZF2	ARID1B	0.423	1
IKZF2	4q-Del	0.423	1
MARK2	Amp_8p11.23	0.423	1
NCOA1	Amp_6p22.3	0.423	1
PARD3	BAP1	0.423	1
PARD3	1q-Amp	0.423	1
PARD3	Del_1p36.11	0.423	1
PPARG	Amp_8p11.23	0.423	1
PPARG	Del_16p13.3	0.423	1
PPP4R1	Amp_8p11.23	0.423	1
RBM10	Del_19p13.3	0.423	1
RBM26	Amp_3p25.2	0.423	1
SF3B3	Del_19p13.3	0.423	1
WAC	ARID1B	0.423	1
ZNF750	ARID1B	0.423	1
ARID1B	Del_1p36.11	0.423	1
CNOT1	11q-Del	0.423	1
EPS8	7p-Amp	0.423	1
EPS8	4q-Del	0.423	1
FAM47C	11q-Del	0.423	1
FAM47C	Del_19p13.3	0.423	1
1q-Amp	7p-Amp	0.423	1
1q-Amp	4q-Del	0.423	1
7p-Amp	Del_1p36.11	0.423	1
Amp_10p14	Del_5q12.1	0.423	1
ASXL2	Amp_12q15	0.424	1
C3orf70	Amp_13q22.1	0.424	1
C3orf70	Del_6p25.3	0.424	1
C3orf70	Del_16q23.1	0.424	1
HORMAD1	ARID2	0.424	1
HRAS	Amp_12q15	0.424	1
NF2	ZFP36L1	0.424	1
NF2	ARID2	0.424	1
NF2	Amp_1p34.2	0.424	1
ZBTB7B	Amp_1p34.2	0.424	1
ZFP36L1	STK32B	0.424	1
ZFP36L1	CNOT3	0.424	1
ZFP36L2	Amp_12q15	0.424	1
ZFP36L2	Amp_13q22.1	0.424	1
ACTB	Amp_12q15	0.424	1
ACTB	Amp_13q22.1	0.424	1
ARID2	STK32B	0.424	1
ARID2	CNOT3	0.424	1
ARID2	ZNF773	0.424	1
ARID2	Amp_6q21	0.424	1
RIPK4	Del_6p25.3	0.424	1
RIPK4	Del_16q23.1	0.424	1
SLC9A4	Amp_13q22.1	0.424	1
ZNF626	Amp_12q15	0.424	1
ASXL1	9p-Del	0.424	1
CNOT3	Amp_1p34.2	0.424	1
CUL1	Amp_12q15	0.424	1
CUL1	Del_6p25.3	0.424	1
5p-Amp	Del_9p23	0.424	1
DIAPH2	Del_8p23.3	0.425	1
GTF2I	RBM26	0.425	1
GTF2I	7q-Amp	0.425	1
KPTN	Amp_5p15.33	0.425	1
PTTG1IP	Amp_5p15.33	0.425	1
STAG2	20p-Amp	0.425	1
STAG2	Del_22q13.32	0.425	1
ATAD5	Del_8p21.3	0.425	1
CPD	Del_8p23.3	0.425	1
DENND5B	PPARGC1A	0.425	1
DENND5B	SSH3	0.425	1
DENND5B	DNAH6	0.425	1
PARD3	Amp_10p14	0.425	1
PPARGC1A	7q-Amp	0.425	1
RBM26	TXNIP	0.425	1
SSH3	15q-Del	0.425	1
TXNIP	15q-Del	0.425	1
ARID1B	Amp_10p14	0.425	1
DNAH6	7q-Amp	0.425	1
FAM47C	Del_8p23.3	0.425	1
TBC1D12	Amp_10p14	0.426	1
ARID2	Amp_10p14	0.426	1
FAT1	Amp_7p21.1	0.426	1
5p-Amp	Del_11q23.3	0.426	1
ASXL2	Amp_11q13.3	0.427	1
CDKN1A	IDH1	0.427	1
CDKN1A	PIGS	0.427	1
CDKN1A	POTEG	0.427	1
CDKN1A	ZNF486	0.427	1
CDKN1A	UGP2	0.427	1
CSMD3	CDK12	0.427	1
DIAPH2	Amp_3q26.33	0.427	1
EP300	DLX6	0.427	1
GPS2	Del_8p23.3	0.427	1
IDH1	5q-Del	0.427	1
PIGS	Del_19p13.3	0.427	1
POTEG	Del_19p13.3	0.427	1
SARNP	11q-Del	0.427	1
ZNF486	11q-Del	0.427	1
ZNF486	5q-Del	0.427	1
CPD	Del_10q23.31	0.427	1
DLX6	11p-Del	0.427	1
OR10Z1	11q-Del	0.427	1
OR10Z1	Del_19p13.3	0.427	1
RBM10	Amp_11q13.3	0.427	1
SF3B3	Amp_11q13.3	0.427	1
SF3B3	Del_10q23.31	0.427	1
TFG	Del_8p23.3	0.427	1
UGP2	11q-Del	0.427	1
CNOT1	Amp_11q13.3	0.427	1
FUS	5q-Del	0.427	1
FUS	Del_19p13.3	0.427	1
11q-Del	Amp_10p14	0.427	1
5q-Del	Amp_10p14	0.427	1
Amp_3q26.33	Amp_17q12	0.427	1
HIST1H3B	Del_18q23	0.428	1
TMCO4	8q-Amp	0.428	1
8q-Amp	Del_Xq21.33	0.428	1
5q-Del	Amp_7p11.2	0.428	1
Amp_7p11.2	Del_19p13.3	0.428	1
Amp_11q22.2	Del_13q14.2	0.428	1
Amp_17q23.3	Del_2q34	0.428	1
ATM	ZFP36L1	0.429	1
BTG2	18q-Del	0.429	1
C12orf43	18q-Del	0.429	1
C12orf43	Del_14q24.1	0.429	1
HIST1H2AG	18q-Del	0.429	1
PIK3CA	MBD1	0.429	1
TGIF2LX	Del_14q24.1	0.429	1
CCNE2	18q-Del	0.429	1
CCNE2	Del_14q24.1	0.429	1
IL10RB	18q-Del	0.429	1
IL10RB	Del_14q24.1	0.429	1
LETMD1	18q-Del	0.429	1
SNRPB	18q-Del	0.429	1
SNRPB	Del_14q24.1	0.429	1
TAF11	18q-Del	0.429	1
TAF11	Del_14q24.1	0.429	1
SCARF2	Del_14q24.1	0.429	1
20p-Amp	4p-Del	0.429	1
19p-Del	Del_14q24.1	0.429	1
Amp_17q12	Del_5q12.1	0.429	1
IDH1	Del_9p21.3	0.43	1
PTEN	Amp_20q11.21	0.43	1
TSC1	HSP90AA1	0.43	1
TSC1	Del_12p13.1	0.43	1
ZNF750	Amp_20q11.21	0.43	1
CDH1	Amp_20q11.21	0.43	1
1q-Amp	Amp_20q11.21	0.43	1
8q-Amp	18q-Del	0.43	1
Amp_12q15	Del_2q37.1	0.43	1
Amp_17q12	Del_11p15.5	0.43	1
ARID1A	EP300	0.431	1
DIAPH2	RARG	0.431	1
DIAPH2	Del_7q36.3	0.431	1
NF2	Del_5q12.1	0.431	1
RPTN	RBM10	0.431	1
RPTN	CNOT1	0.431	1
ZBTB7B	Del_5q12.1	0.431	1
ZFP36L1	18q-Del	0.431	1
ZNF180	RBM10	0.431	1
CPD	DDX3X	0.431	1
CPD	NDC80	0.431	1
CPD	19q-Amp	0.431	1
DDX3X	RBM10	0.431	1
NAA15	RBM10	0.431	1
NAA15	SF3B3	0.431	1
NDC80	CNOT1	0.431	1
NDC80	FAM47C	0.431	1
PSMC6	9q-Del	0.431	1
PSMC6	Del_5q12.1	0.431	1
RARG	RBM10	0.431	1
RBM10	Amp_4q13.3	0.431	1
RBM10	Del_7q36.3	0.431	1
RBP2	Del_2q34	0.431	1
SF3B3	Del_7q36.3	0.431	1
TRERF1	Del_7q36.3	0.431	1
CNOT1	Del_7q36.3	0.431	1
CNOT3	9q-Del	0.431	1
CNOT3	Del_5q12.1	0.431	1
DAZAP1	Del_2q34	0.431	1
FAM47C	19q-Amp	0.431	1
FAM47C	Amp_4q13.3	0.431	1
9q-Del	Amp_6q21	0.431	1
Amp_1p34.2	Amp_22q12.2	0.431	1
C12orf43	Del_9p23	0.432	1
CREBBP	NFE2L2	0.432	1
CREBBP	RXRA	0.432	1
CREBBP	16p-Del	0.432	1
CSMD3	ERBB3	0.432	1
ERBB2	Amp_4q13.3	0.432	1
ERBB2	Del_7q36.3	0.432	1
GTF2I	9p-Del	0.432	1
KLF5	Amp_8p11.21	0.432	1
KLF5	Del_2q22.1	0.432	1
NFE2L2	TBC1D12	0.432	1
NFE2L2	Del_6q27	0.432	1
NRAS	Amp_7p11.2	0.432	1
RB1	ITGA4	0.432	1
RB1	DNAH6	0.432	1
SF3B1	Del_11q25	0.432	1
ZFP36L1	Del_17p12	0.432	1
ZFP36L2	8p-Del	0.432	1
PPARGC1A	9p-Del	0.432	1
RARG	Amp_19q12	0.432	1
RIPK4	8p-Del	0.432	1
SLC9A4	8p-Del	0.432	1
UBA52	Amp_7p11.2	0.432	1
ZBTB47	Amp_7p11.2	0.432	1
DNAH6	9p-Del	0.432	1
HLA-A	Amp_7p11.2	0.432	1
UNC93B1	Amp_7p11.2	0.432	1
19p-Del	Del_9p23	0.432	1
4q-Del	Del_2q22.1	0.432	1
ASXL2	DENND5B	0.434	1
CDKN2A	TMCO4	0.434	1
CDKN2A	Del_Xq21.33	0.434	1
CFHR4	NFE2L2	0.434	1
CFHR4	16p-Del	0.434	1
CFHR4	22q-Del	0.434	1
CNNM4	MED13	0.434	1
CNNM4	Amp_16p13.2	0.434	1
FBXW7	NKX2-2	0.434	1
GPS2	ATAD5	0.434	1
HIST1H3B	RHOB	0.434	1
MIPOL1	PKHD1	0.434	1
NFE2L2	CTCF	0.434	1
NFE2L2	DPYS	0.434	1
NFE2L2	MBD1	0.434	1
NFE2L2	PPARG	0.434	1
NFE2L2	PPP4R1	0.434	1
NFE2L2	Del_Xp11.3	0.434	1
PKHD1	SF1	0.434	1
PKHD1	ZNF511	0.434	1
PROS1	22q-Del	0.434	1
RHOB	17q-Amp	0.434	1
RHOB	Del_1q32.1	0.434	1
RXRA	MBD1	0.434	1
RXRA	USP28	0.434	1
SF1	ATAD5	0.434	1
SF3B1	DPYS	0.434	1
SF3B1	Del_Xp11.3	0.434	1
ATAD5	NKX2-2	0.434	1
CTCF	Amp_11q22.2	0.434	1
DLX6	Del_18q23	0.434	1
DPYS	Amp_11q22.2	0.434	1
MARK2	MYO16	0.434	1
MARK2	22q-Del	0.434	1
MYO16	USP28	0.434	1
MYO16	Del_Xp11.3	0.434	1
PPARG	16p-Del	0.434	1
PPARG	22q-Del	0.434	1
RBM26	Amp_17q12	0.434	1
USP28	Amp_11q22.2	0.434	1
FUT5	8q-Amp	0.434	1
15q-Del	Amp_17q12	0.434	1
16p-Del	Del_Xp11.3	0.434	1
NF1	NFE2L2	0.435	1
NF1	16p-Del	0.435	1
NF1	Amp_11q22.2	0.435	1
CTNNB1	Del_2q34	0.436	1
ERBB3	TBC1D12	0.436	1
FGFR3	RBM26	0.436	1
NFE2L3	Del_2q34	0.436	1
STAG2	7q-Amp	0.436	1
CASP8	Del_2q34	0.436	1
DENND5B	Amp_8p11.23	0.436	1
DENND5B	Del_16p13.3	0.436	1
IKZF2	Del_2q34	0.436	1
WAC	Del_2q34	0.436	1
ZNF750	Del_2q34	0.436	1
CDH1	Del_2q34	0.436	1
EPS8	Del_2q34	0.436	1
TSC1	Amp_19q13.43	0.437	1
Amp_1p34.2	Amp_20q11.21	0.437	1
C3orf70	20p-Amp	0.438	1
CDKN1A	3q-Amp	0.438	1
CDKN1A	Del_15q13.1	0.438	1
HRAS	Del_22q13.32	0.438	1
IDH1	Amp_19q13.43	0.438	1
KPTN	Del_17p12	0.438	1
PIGS	Amp_19q13.43	0.438	1
SARNP	Amp_19q13.43	0.438	1
OR10Z1	Amp_19q13.43	0.438	1
RIPK4	Del_22q13.32	0.438	1
FUS	Amp_19q13.43	0.438	1
CTNNB1	HSP90AA1	0.439	1
DIAPH2	Amp_19q13.43	0.439	1
ERCC2	HIST1H2AG	0.439	1
ERCC2	TGIF2LX	0.439	1
NFE2L3	Del_12p13.1	0.439	1
PLCXD3	20q-Amp	0.439	1
RHOB	Amp_12q15	0.439	1
RUNX1	ASXL1	0.439	1
CASP8	HSP90AA1	0.439	1
CASP8	Del_12p13.1	0.439	1
CDKN2AIPNL	Del_9p21.3	0.439	1
EXOSC10	ASXL1	0.439	1
FAT1	RBP2	0.439	1
FAT1	ADC	0.439	1
HSP90AA1	BAP1	0.439	1
IKZF2	ASXL1	0.439	1
IKZF2	Del_12p13.1	0.439	1
RBP2	20q-Amp	0.439	1
RBP2	Del_11q23.3	0.439	1
THRAP3	Del_12p13.1	0.439	1
TRERF1	Amp_19q13.43	0.439	1
WAC	Del_12p13.1	0.439	1
ASXL1	1q-Amp	0.439	1
EPS8	Del_12p13.1	0.439	1
8q-Amp	10q-Del	0.439	1
Amp_11q13.3	Amp_12q15	0.439	1
Amp_11q13.3	Amp_13q22.1	0.439	1
ERCC2	17p-Del	0.44	1
FBXW7	KLF5	0.44	1
KLF5	MED13	0.44	1
NF2	Del_13q14.2	0.44	1
NRAS	Amp_12q15	0.44	1
NRAS	Amp_13q22.1	0.44	1
NRAS	Del_6p25.3	0.44	1
NRAS	Del_16q23.1	0.44	1
PKHD1	7p-Amp	0.44	1
PKHD1	4q-Del	0.44	1
PKHD1	Amp_8p11.21	0.44	1
GLTP	Amp_12q15	0.44	1
GLTP	Del_6p25.3	0.44	1
UBA52	Amp_12q15	0.44	1
UBA52	Del_16q23.1	0.44	1
ZBTB47	Amp_13q22.1	0.44	1
ZBTB47	Del_16q23.1	0.44	1
HLA-A	Amp_13q22.1	0.44	1
HLA-A	Del_6p25.3	0.44	1
UNC93B1	Amp_12q15	0.44	1
UNC93B1	Amp_13q22.1	0.44	1
4q-Del	Amp_16p13.2	0.44	1
ARID1A	Del_15q13.1	0.441	1
ATM	RBM10	0.441	1
CNNM4	RB1	0.441	1
CNNM4	9p-Del	0.441	1
ERBB3	Del_4q22.1	0.441	1
FBXW7	Amp_17q12	0.441	1
GPS2	RB1	0.441	1
GPS2	Amp_1q23.3	0.441	1
SF1	9p-Del	0.441	1
MED13	Amp_17q12	0.441	1
RBM10	Del_4q34.2	0.441	1
CNOT1	Del_4q34.2	0.441	1
3q-Amp	Amp_5p15.33	0.441	1
METTL3	CUL1	0.442	1
PIK3CA	Del_11q23.3	0.442	1
RHOA	ZFP36L2	0.442	1
RHOA	ACTB	0.442	1
RHOA	CUL1	0.442	1
SHANK1	ACTB	0.442	1
SHANK1	ZNF626	0.442	1
SHANK1	CUL1	0.442	1
5p-Amp	22q-Del	0.442	1
C3orf70	Del_5q12.1	0.443	1
EP300	Del_13q14.2	0.443	1
ZFP36L2	Del_5q12.1	0.443	1
FAM47C	Del_9p21.3	0.443	1
3p-Amp	Del_5q12.1	0.443	1
ASXL2	20p-Amp	0.444	1
CFHR4	Amp_3q26.33	0.444	1
CFHR4	Del_10q23.31	0.444	1
CREBBP	DDX3X	0.444	1
CREBBP	19q-Amp	0.444	1
GTF2I	Amp_4p16.3	0.444	1
RPTN	Del_11q25	0.444	1
TBC1D12	ZNF180	0.444	1
TBC1D12	NDC80	0.444	1
TBC1D12	Amp_4q13.3	0.444	1
CTCF	Amp_3q26.33	0.444	1
DPYS	Amp_3q26.33	0.444	1
DPYS	Amp_11q13.3	0.444	1
EPHA2	PPARGC1A	0.444	1
EPHA2	TXNIP	0.444	1
EPHA2	DNAH6	0.444	1
ITGA4	Amp_4p16.3	0.444	1
MARK2	Amp_3q26.33	0.444	1
MARK2	Del_10q23.31	0.444	1
NAA15	Amp_7p21.1	0.444	1
NDC80	Del_11q25	0.444	1
NEK11	Amp_4p16.3	0.444	1
PPARG	Del_10q23.31	0.444	1
PPARGC1A	Amp_4p16.3	0.444	1
PPP4R1	Del_10q23.31	0.444	1
TXNIP	OGDH	0.444	1
19q-Amp	Amp_7p21.1	0.444	1
20p-Amp	Amp_17q12	0.444	1
8q-Amp	9q-Del	0.444	1
Amp_11q13.3	Del_Xp11.3	0.444	1
Del_7q36.3	Del_11q25	0.444	1
ARID1A	Amp_17q12	0.445	1
GTF2I	Amp_7p11.2	0.445	1
FAT1	9p-Del	0.445	1
NEK11	SPTAN1	0.445	1
NEK11	Amp_7p11.2	0.445	1
SSH3	SPTAN1	0.445	1
TXNIP	Amp_7p11.2	0.445	1
C3orf70	Del_9p23	0.446	1
HRAS	Del_9p23	0.446	1
KDM6A	Amp_20q11.21	0.446	1
PIK3CA	TAF11	0.446	1
ZFP36L2	Del_8p23.3	0.446	1
AGR3	Del_2q22.1	0.446	1
RBP2	Amp_8p11.21	0.446	1
SF3B3	Amp_1q23.3	0.446	1
SLC9A4	Del_9p23	0.446	1
ZNF626	Del_9p23	0.446	1
DAZAP1	Amp_8p11.21	0.446	1
FAM47C	Amp_1q23.3	0.446	1
FOXA1	FAT1	0.447	1
GPR50	20q-Amp	0.447	1
GPR50	Del_11q23.3	0.447	1
GPS2	NF1	0.447	1
NFE2L3	20q-Amp	0.447	1
PTEN	20q-Amp	0.447	1
CASP8	20q-Amp	0.447	1
CASP8	Del_11q23.3	0.447	1
DCDC1	Del_11q23.3	0.447	1
EXOSC10	FAT1	0.447	1
THRAP3	20q-Amp	0.447	1
THRAP3	Del_11q23.3	0.447	1
ZNF750	20q-Amp	0.447	1
ZNF750	Del_11q23.3	0.447	1
ASXL1	10q-Del	0.447	1
ASXL1	6q-Del	0.447	1
ASXL1	Del_15q13.1	0.447	1
BAP1	Del_11q23.3	0.447	1
CDH1	Del_11q23.3	0.447	1
EPS8	20q-Amp	0.447	1
EPS8	Del_11q23.3	0.447	1
17p-Del	Amp_8q22.3	0.447	1
ELF3	NFE2L2	0.448	1
ELF3	RXRA	0.448	1
ELF3	MYO16	0.448	1
ELF3	16p-Del	0.448	1
ERBB2	4q-Del	0.448	1
KLF5	Amp_19q12	0.448	1
TBC1D12	3q-Amp	0.448	1
TBC1D12	10q-Del	0.448	1
TBC1D12	6q-Del	0.448	1
ZNF180	Del_2q37.1	0.448	1
CTCF	Del_8p21.3	0.448	1
KDM5A	Del_4q22.1	0.448	1
NCOA1	Del_4q22.1	0.448	1
PARD3	Amp_19q12	0.448	1
OGDH	Del_4q22.1	0.448	1
20q-Amp	Amp_3q26.33	0.448	1
5q-Del	Amp_12q15	0.448	1
Amp_4p16.3	Del_4q22.1	0.448	1
Amp_11q22.2	Del_3p14.2	0.448	1
BTG2	Del_4q22.1	0.449	1
HORMAD1	5p-Amp	0.449	1
IDH1	TSC1	0.449	1
NHLRC1	Del_4q22.1	0.449	1
NRAS	Del_22q13.32	0.449	1
PIK3CA	HSP90AA1	0.449	1
POTEG	TSC1	0.449	1
PSIP1	NDC80	0.449	1
RHOA	11p-Del	0.449	1
RPTN	RBM26	0.449	1
RPTN	7q-Amp	0.449	1
SARNP	TSC1	0.449	1
TGIF2LX	Del_4q22.1	0.449	1
ZNF180	DENND5B	0.449	1
DDX3X	DENND5B	0.449	1
DDX3X	15q-Del	0.449	1
DENND5B	RARG	0.449	1
DENND5B	19q-Amp	0.449	1
DENND5B	Del_7q36.3	0.449	1
GLTP	Del_22q13.32	0.449	1
NAA15	RBM26	0.449	1
RARG	7q-Amp	0.449	1
RBM26	Del_8p21.3	0.449	1
UBA52	Del_22q13.32	0.449	1
ZBTB47	Del_22q13.32	0.449	1
HLA-A	20p-Amp	0.449	1
SCARF2	Del_4q22.1	0.449	1
UNC93B1	20p-Amp	0.449	1
UNC93B1	Del_22q13.32	0.449	1
19q-Amp	7q-Amp	0.449	1
5p-Amp	Amp_6q21	0.449	1
7q-Amp	Amp_4q13.3	0.449	1
15q-Del	Del_7q36.3	0.449	1
ARID1A	Amp_5p15.33	0.45	1
CDKN1A	7q-Amp	0.45	1
CDKN1A	15q-Del	0.45	1
CFHR4	4q-Del	0.45	1
KLF5	PROS1	0.45	1
KLF5	DPYS	0.45	1
KLF5	Del_Xp11.3	0.45	1
PROS1	7p-Amp	0.45	1
CTCF	4q-Del	0.45	1
DENND5B	Del_19p13.3	0.45	1
DPYS	PARD3	0.45	1
DPYS	7p-Amp	0.45	1
FAT1	Del_12p13.1	0.45	1
GLTP	Amp_5p15.33	0.45	1
MARK2	ARID1B	0.45	1
MARK2	7p-Amp	0.45	1
MBD1	ARID1B	0.45	1
MBD1	7p-Amp	0.45	1
MBD1	4q-Del	0.45	1
PARD3	PPARG	0.45	1
PARD3	Del_Xp11.3	0.45	1
PPARG	ARID1B	0.45	1
PPARG	7p-Amp	0.45	1
PPARG	4q-Del	0.45	1
PPP4R1	ARID1B	0.45	1
USP28	7p-Amp	0.45	1
ASXL1	20q-Amp	0.45	1
HLA-A	Amp_5p15.33	0.45	1
UNC93B1	Amp_5p15.33	0.45	1
7p-Amp	Del_Xp11.3	0.45	1
ERBB3	STAG2	0.451	1
NF2	14q-Del	0.451	1
RHOB	Del_9p23	0.451	1
ZBTB7B	CDK12	0.451	1
ZBTB7B	14q-Del	0.451	1
CDK12	Amp_6q21	0.451	1
PSMC6	14q-Del	0.451	1
PSMC6	4p-Del	0.451	1
CNOT3	14q-Del	0.451	1
ZNF773	14q-Del	0.451	1
ZNF773	4p-Del	0.451	1
ELF3	TP53	0.452	1
ERBB3	ACTB	0.452	1
ERBB3	CUL1	0.452	1
ATM	Del_9p23	0.453	1
ERBB2	STAG2	0.453	1
ERBB2	Amp_8p11.23	0.453	1
IDH1	Del_11p15.5	0.453	1
PARD3	Amp_1q21.3	0.453	1
FUS	Del_11p15.5	0.453	1
4q-Del	Amp_1q21.3	0.453	1
EP300	MED13	0.454	1
FBXW7	11p-Del	0.454	1
FBXW7	17p-Del	0.454	1
NFE2L2	ARID2	0.454	1
NFE2L2	Amp_1p34.2	0.454	1
RB1	CDKN2AIPNL	0.454	1
ZFP36L1	MYO16	0.454	1
ZFP36L1	Amp_11q22.2	0.454	1
ARID2	16p-Del	0.454	1
ATAD5	17p-Del	0.454	1
RBM26	Del_17p12	0.454	1
RBP2	Amp_19q12	0.454	1
DAZAP1	Amp_19q12	0.454	1
16p-Del	Amp_1p34.2	0.454	1
22q-Del	Amp_1p34.2	0.454	1
Amp_7p11.2	Amp_12q15	0.454	1
ATM	PROS1	0.455	1
ATM	MBD1	0.455	1
SLC9A4	Del_13q14.2	0.455	1
USP28	Del_4q34.2	0.455	1
ZNF626	Del_13q14.2	0.455	1
CUL1	Del_13q14.2	0.455	1
3p-Amp	Del_13q14.2	0.455	1
5q-Del	Amp_3q26.33	0.455	1
CSMD3	Del_10q23.31	0.456	1
CTNNB1	DIAPH2	0.456	1
CTNNB1	CPD	0.456	1
CTNNB1	RBM10	0.456	1
CTNNB1	SF3B3	0.456	1
CTNNB1	TRERF1	0.456	1
CTNNB1	CNOT1	0.456	1
CTNNB1	FAM47C	0.456	1
DIAPH2	FOXA1	0.456	1
DIAPH2	NFE2L3	0.456	1
DIAPH2	PTEN	0.456	1
DIAPH2	RUNX1	0.456	1
DIAPH2	CASP8	0.456	1
DIAPH2	DCDC1	0.456	1
DIAPH2	IKZF2	0.456	1
DIAPH2	1q-Amp	0.456	1
ELF3	RARG	0.456	1
ELF3	19q-Amp	0.456	1
FOXA1	CPD	0.456	1
FOXA1	SF3B3	0.456	1
FOXA1	CNOT1	0.456	1
FOXA1	FAM47C	0.456	1
FOXQ1	SF3B3	0.456	1
KRAS	FAM47C	0.456	1
NFE2L3	SF3B3	0.456	1
PLCXD3	Del_8p23.3	0.456	1
PTEN	CPD	0.456	1
PTEN	FAM47C	0.456	1
RUNX1	RBM10	0.456	1
RUNX1	SF3B3	0.456	1
RUNX1	TRERF1	0.456	1
RUNX1	CNOT1	0.456	1
RUNX1	FAM47C	0.456	1
TSC1	RBM10	0.456	1
TSC1	TRERF1	0.456	1
ZNF180	Amp_17q23.3	0.456	1
AGR3	Del_8p23.3	0.456	1
CPD	EXOSC10	0.456	1
CPD	Del_1p36.11	0.456	1
DCDC1	RBM10	0.456	1
DCDC1	TRERF1	0.456	1
DDX3X	Amp_17q23.3	0.456	1
EXOSC10	RBM10	0.456	1
EXOSC10	CNOT1	0.456	1
EXOSC10	FAM47C	0.456	1
IKZF2	TRERF1	0.456	1
NAA15	Amp_17q23.3	0.456	1
RARG	Del_3p14.2	0.456	1
RBM10	ZNF750	0.456	1
RBM10	BAP1	0.456	1
RBM10	1q-Amp	0.456	1
RBM10	Del_1p36.11	0.456	1
RBP2	Del_8p23.3	0.456	1
SF3B3	THRAP3	0.456	1
SF3B3	ZNF750	0.456	1
SF3B3	BAP1	0.456	1
SF3B3	EPS8	0.456	1
SF3B3	1q-Amp	0.456	1
SF3B3	Del_1p36.11	0.456	1
TRERF1	ZNF750	0.456	1
TRERF1	Del_1p36.11	0.456	1
WAC	CNOT1	0.456	1
ZNF750	CNOT1	0.456	1
ZNF750	FAM47C	0.456	1
BAP1	CNOT1	0.456	1
BAP1	FAM47C	0.456	1
CNOT1	1q-Amp	0.456	1
EPS8	FAM47C	0.456	1
Amp_4q13.3	Del_3p14.2	0.456	1
NEK11	Del_9p21.3	0.457	1
CSMD3	GNA13	0.458	1
CSMD3	17q-Amp	0.458	1
ELF3	ERBB3	0.458	1
ERBB2	FBXW7	0.458	1
ERBB3	Del_3p14.2	0.458	1
ERCC2	Del_18q23	0.458	1
PKHD1	Amp_19q12	0.458	1
MED13	Amp_19q12	0.458	1
Amp_16p13.2	Amp_19q12	0.458	1
ASXL2	HIST1H2AG	0.459	1
ASXL2	NHLRC1	0.459	1
ASXL2	SNRPB	0.459	1
ASXL2	SCARF2	0.459	1
ATM	Amp_13q22.1	0.459	1
BTG2	Amp_17q12	0.459	1
CSMD3	TSC1	0.459	1
CTNNB1	Amp_8p11.21	0.459	1
CTNNB1	Del_2q22.1	0.459	1
ERBB3	HLA-A	0.459	1
GPR50	Amp_3p25.2	0.459	1
GPS2	ARID2	0.459	1
GTF2I	Del_6p25.3	0.459	1
KDM6A	HSP90AA1	0.459	1
KLF5	NF1	0.459	1
MIPOL1	ZFP36L1	0.459	1
NHLRC1	Amp_17q12	0.459	1
PTEN	Amp_8p11.21	0.459	1
RUNX1	Amp_8p11.21	0.459	1
RUNX1	Del_2q22.1	0.459	1
SF1	ZFP36L1	0.459	1
SF1	ARID2	0.459	1
ZFP36L1	ZNF511	0.459	1
ZFP36L1	NKX2-2	0.459	1
ZNF511	ARID2	0.459	1
ZNF511	Amp_1p34.2	0.459	1
ARID2	TFG	0.459	1
EXOSC10	Amp_3p25.2	0.459	1
IKZF2	Del_2q22.1	0.459	1
PHLDA3	Amp_17q12	0.459	1
PPARGC1A	Amp_12q15	0.459	1
SNRPB	Amp_17q12	0.459	1
SSH3	Amp_13q22.1	0.459	1
SSH3	Del_16q23.1	0.459	1
THRAP3	Amp_8p11.21	0.459	1
TXNIP	Amp_12q15	0.459	1
ZNF750	Amp_8p11.21	0.459	1
CDH1	Amp_8p11.21	0.459	1
DNAH6	Del_6p25.3	0.459	1
SCARF2	Amp_17q12	0.459	1
1q-Amp	Amp_8p11.21	0.459	1
19p-Del	Amp_17q12	0.459	1
CSMD3	RHOB	0.46	1
CSMD3	EPHA2	0.46	1
ARID1A	NF2	0.461	1
ARID1A	STK32B	0.461	1
ARID1A	CNOT3	0.461	1
ARID1A	Amp_6q21	0.461	1
FBXW7	5q-Del	0.461	1
FGFR3	ZNF185	0.461	1
HORMAD1	Amp_5p15.33	0.461	1
IDH1	6q-Del	0.461	1
PIGS	6q-Del	0.461	1
PKHD1	11q-Del	0.461	1
PKHD1	Del_19p13.3	0.461	1
POTEG	3q-Amp	0.461	1
POTEG	6q-Del	0.461	1
POTEG	Del_15q13.1	0.461	1
STAG2	DLX6	0.461	1
STAG2	ZNF185	0.461	1
ZNF486	6q-Del	0.461	1
ATAD5	11q-Del	0.461	1
MED13	Del_19p13.3	0.461	1
OR10Z1	3q-Amp	0.461	1
UGP2	10q-Del	0.461	1
UGP2	Del_15q13.1	0.461	1
ZNF185	Amp_8p11.23	0.461	1
ZNF185	Del_16p13.3	0.461	1
Amp_5p15.33	Amp_6q21	0.461	1
Amp_16p13.2	Del_19p13.3	0.461	1
CREBBP	PLCXD3	0.462	1
CREBBP	RBP2	0.462	1
CREBBP	ADC	0.462	1
PLCXD3	Amp_7p21.1	0.462	1
PLCXD3	Del_6q27	0.462	1
TBC1D12	RBP2	0.462	1
RBM26	Amp_3q26.33	0.462	1
RBP2	Del_11q25	0.462	1
ADC	Del_6q27	0.462	1
DAZAP1	Amp_7p21.1	0.462	1
Amp_1p34.2	Del_2q34	0.462	1
C3orf70	HRAS	0.463	1
C3orf70	CUL1	0.463	1
C3orf70	3p-Amp	0.463	1
CREBBP	ARID1B	0.463	1
ERBB3	9q-Del	0.463	1
HIST1H3B	NFE2L2	0.463	1
HIST1H3B	SF3B1	0.463	1
HIST1H3B	Amp_11q22.2	0.463	1
HRAS	ZFP36L2	0.463	1
HRAS	ACTB	0.463	1
HRAS	SLC9A4	0.463	1
HRAS	CUL1	0.463	1
NFE2L2	TMCO4	0.463	1
NFE2L2	17q-Amp	0.463	1
NFE2L2	Del_1q32.1	0.463	1
NFE2L2	Del_Xq21.33	0.463	1
RXRA	Del_1q32.1	0.463	1
SF3B1	GNA13	0.463	1
SF3B1	TMCO4	0.463	1
SF3B1	Del_Xq21.33	0.463	1
TBC1D12	4q-Del	0.463	1
ZFP36L2	ZNF626	0.463	1
ZFP36L2	CUL1	0.463	1
ZFP36L2	3p-Amp	0.463	1
MYO16	17q-Amp	0.463	1
MYO16	Del_1q32.1	0.463	1
MYO16	Del_Xq21.33	0.463	1
RIPK4	3p-Amp	0.463	1
SLC9A4	CUL1	0.463	1
SLC9A4	3p-Amp	0.463	1
ZNF626	CUL1	0.463	1
GNA13	Amp_11q22.2	0.463	1
TMCO4	16p-Del	0.463	1
TMCO4	22q-Del	0.463	1
17q-Amp	22q-Del	0.463	1
7p-Amp	Del_6q27	0.463	1
16p-Del	Del_1q32.1	0.463	1
GTF2I	SHANK1	0.464	1
ASXL2	ERBB3	0.465	1
C3orf70	Amp_1q23.3	0.465	1
CDKN2A	STK32B	0.465	1
ERBB3	Amp_17q12	0.465	1
GTF2I	Amp_10p14	0.465	1
PKHD1	Del_2q37.1	0.465	1
PTTG1IP	Del_9p23	0.465	1
RB1	RBM10	0.465	1
RB1	SF3B3	0.465	1
RB1	TRERF1	0.465	1
RHOB	ZNF773	0.465	1
RHOB	Amp_6q21	0.465	1
HSP90AA1	Del_2q22.1	0.465	1
SLC9A4	Amp_1q23.3	0.465	1
ARID1B	Amp_6p22.3	0.465	1
ARID1B	Del_13q14.2	0.465	1
ASXL1	Amp_8p11.21	0.465	1
CNOT1	9p-Del	0.465	1
FAM47C	9p-Del	0.465	1
4q-Del	Amp_6p22.3	0.465	1
CFHR4	HSP90AA1	0.466	1
FBXW7	HSP90AA1	0.466	1
FBXW7	Del_12p13.1	0.466	1
HRAS	PIK3CA	0.466	1
PIK3CA	ZNF626	0.466	1
PKHD1	Del_12p13.1	0.466	1
PROS1	HSP90AA1	0.466	1
CTCF	Del_12p13.1	0.466	1
DPYS	ASXL1	0.466	1
HSP90AA1	Amp_16p13.2	0.466	1
HSP90AA1	Del_Xp11.3	0.466	1
MBD1	Del_12p13.1	0.466	1
PPP4R1	Del_12p13.1	0.466	1
ASXL1	Del_Xp11.3	0.466	1
SPTAN1	Del_8p21.3	0.466	1
5p-Amp	11p-Del	0.466	1
Amp_16p13.2	Del_12p13.1	0.466	1
Del_12p13.1	Del_Xp11.3	0.466	1
CNNM4	Amp_10p14	0.467	1
ELF3	10q-Del	0.467	1
ELF3	Amp_1q23.3	0.467	1
ZNF511	Amp_10p14	0.467	1
DENND5B	Amp_19q13.43	0.467	1
RBM26	Amp_19q13.43	0.467	1
ARID1A	ZNF180	0.468	1
ARID1A	RARG	0.468	1
CDKN1A	Del_22q13.32	0.468	1
EP300	HORMAD1	0.468	1
EP300	FAT1	0.468	1
EP300	20q-Amp	0.468	1
HORMAD1	17p-Del	0.468	1
NF1	Amp_8p11.21	0.468	1
RPTN	EPHA2	0.468	1
RPTN	Amp_4p16.3	0.468	1
ZBTB7B	11p-Del	0.468	1
ZBTB7B	17p-Del	0.468	1
ZNF180	EPHA2	0.468	1
ZNF180	HFM1	0.468	1
AGR3	Amp_1q23.3	0.468	1
DDX3X	EPHA2	0.468	1
EPHA2	NAA15	0.468	1
EPHA2	NDC80	0.468	1
EPHA2	Del_7q36.3	0.468	1
FAT1	11p-Del	0.468	1
HFM1	NAA15	0.468	1
HFM1	NDC80	0.468	1
HFM1	19q-Amp	0.468	1
HFM1	Amp_4q13.3	0.468	1
HFM1	Del_7q36.3	0.468	1
KDM5A	NAA15	0.468	1
KDM5A	Amp_4q13.3	0.468	1
KDM5A	Del_7q36.3	0.468	1
NAA15	Amp_4p16.3	0.468	1
NCOA1	Del_7q36.3	0.468	1
NDC80	OGDH	0.468	1
NDC80	Amp_4p16.3	0.468	1
PSMC6	11p-Del	0.468	1
PSMC6	17p-Del	0.468	1
RARG	OGDH	0.468	1
RARG	Amp_5p15.33	0.468	1
OGDH	19q-Amp	0.468	1
OGDH	Amp_3p25.2	0.468	1
OGDH	Del_7q36.3	0.468	1
ZNF773	11p-Del	0.468	1
ZNF773	17p-Del	0.468	1
17p-Del	Amp_6q21	0.468	1
Amp_5p15.33	Del_7q36.3	0.468	1
CTNNB1	Del_11p15.5	0.469	1
FGFR3	HIST1H3B	0.469	1
FGFR3	17q-Amp	0.469	1
KRAS	Del_11p15.5	0.469	1
NRAS	Del_17p12	0.469	1
PTEN	Del_11p15.5	0.469	1
STAG2	GNA13	0.469	1
DCDC1	Del_11p15.5	0.469	1
IKZF2	Del_11p15.5	0.469	1
SF3B3	Del_2q34	0.469	1
THRAP3	Del_11p15.5	0.469	1
TRERF1	Del_2q34	0.469	1
WAC	Del_11p15.5	0.469	1
ZBTB47	Del_17p12	0.469	1
ZNF750	Del_11p15.5	0.469	1
BAP1	Del_11p15.5	0.469	1
CDH1	Del_11p15.5	0.469	1
FAM47C	Del_2q34	0.469	1
17q-Amp	Amp_8p11.23	0.469	1
Del_1q32.1	Del_16p13.3	0.469	1
C12orf43	CDKN1A	0.47	1
C12orf43	11q-Del	0.47	1
C12orf43	5q-Del	0.47	1
CDKN1A	HIST1H2AG	0.47	1
CDKN1A	NHLRC1	0.47	1
CDKN1A	TGIF2LX	0.47	1
CREBBP	Amp_19q12	0.47	1
ELF3	PLCXD3	0.47	1
ELF3	RBP2	0.47	1
EP300	Amp_11q22.2	0.47	1
ERBB2	Del_9p23	0.47	1
FBXW7	Del_18q23	0.47	1
HIST1H2AG	11q-Del	0.47	1
HIST1H2AG	5q-Del	0.47	1
HIST1H2AG	Del_19p13.3	0.47	1
NFE2L2	11p-Del	0.47	1
NHLRC1	5q-Del	0.47	1
PKHD1	Del_18q23	0.47	1
PLCXD3	Amp_17q23.3	0.47	1
TGIF2LX	5q-Del	0.47	1
TGIF2LX	Del_19p13.3	0.47	1
AGR3	Amp_17q23.3	0.47	1
AGR3	Del_3p14.2	0.47	1
ATAD5	Del_18q23	0.47	1
CCNE2	11q-Del	0.47	1
CCNE2	5q-Del	0.47	1
CCNE2	Del_19p13.3	0.47	1
IL10RB	11q-Del	0.47	1
IL10RB	Del_19p13.3	0.47	1
LETMD1	11q-Del	0.47	1
LETMD1	5q-Del	0.47	1
MYO16	11p-Del	0.47	1
PHLDA3	11q-Del	0.47	1
PHLDA3	Del_19p13.3	0.47	1
RBM26	Del_2q37.1	0.47	1
TAF11	11q-Del	0.47	1
TAF11	5q-Del	0.47	1
TAF11	Del_19p13.3	0.47	1
ADC	Amp_17q23.3	0.47	1
ADC	Del_3p14.2	0.47	1
DAZAP1	Amp_17q23.3	0.47	1
DAZAP1	Del_3p14.2	0.47	1
SCARF2	11q-Del	0.47	1
SCARF2	5q-Del	0.47	1
SCARF2	Del_19p13.3	0.47	1
16p-Del	17p-Del	0.47	1
Amp_5p15.33	Del_11p15.5	0.47	1
Amp_16p13.2	Del_18q23	0.47	1
Del_9p21.3	Del_19p13.3	0.47	1
CTNNB1	ERBB2	0.471	1
ERBB2	FOXA1	0.471	1
ERBB2	PTEN	0.471	1
ERBB2	EXOSC10	0.471	1
ERBB2	WAC	0.471	1
ERBB2	Del_1p36.11	0.471	1
GPR50	Amp_19q12	0.471	1
NFE2L3	Amp_19q12	0.471	1
DCDC1	Amp_19q12	0.471	1
THRAP3	Amp_19q12	0.471	1
CDH1	Amp_19q12	0.471	1
1q-Amp	Amp_19q12	0.471	1
ARID1A	Amp_20q11.21	0.472	1
ITGA4	Del_22q13.32	0.472	1
PPARGC1A	20p-Amp	0.472	1
TXNIP	Del_22q13.32	0.472	1
CNOT1	Del_9p23	0.472	1
DNAH6	Del_22q13.32	0.472	1
FAM47C	Del_9p23	0.472	1
20p-Amp	5p-Amp	0.472	1
4p-Del	Amp_22q12.2	0.472	1
Amp_1p34.2	Del_13q14.2	0.472	1
Amp_3q26.33	Amp_8p11.21	0.472	1
ARID1A	KDM5A	0.473	1
ARID1A	Amp_4p16.3	0.473	1
ATM	5q-Del	0.473	1
ATM	Del_19p13.3	0.473	1
CDKN1A	Del_4q34.2	0.473	1
FBXW7	PIGS	0.473	1
FBXW7	ZNF486	0.473	1
FBXW7	UGP2	0.473	1
FGFR3	EPHA2	0.473	1
PIGS	Amp_16p13.2	0.473	1
PKHD1	FUS	0.473	1
POTEG	Amp_16p13.2	0.473	1
STAG2	Amp_4p16.3	0.473	1
TSC1	Amp_20q11.21	0.473	1
ZNF486	MED13	0.473	1
ATAD5	UGP2	0.473	1
HFM1	Amp_8p11.23	0.473	1
KDM5A	Amp_8p11.23	0.473	1
NCOA1	Amp_5p15.33	0.473	1
PPARG	Del_8p23.3	0.473	1
UGP2	Amp_16p13.2	0.473	1
FUS	Amp_16p13.2	0.473	1
OGDH	Amp_5p15.33	0.473	1
OGDH	Amp_8p11.23	0.473	1
OGDH	Del_16p13.3	0.473	1
Amp_4p16.3	Amp_8p11.23	0.473	1
Amp_4p16.3	Del_16p13.3	0.473	1
CTNNB1	PSIP1	0.474	1
CTNNB1	DENND5B	0.474	1
CTNNB1	15q-Del	0.474	1
DIAPH2	3q-Amp	0.474	1
DIAPH2	Del_15q13.1	0.474	1
FOXA1	RBM26	0.474	1
FOXA1	15q-Del	0.474	1
FOXQ1	7q-Amp	0.474	1
FOXQ1	15q-Del	0.474	1
GPR50	7q-Amp	0.474	1
GPR50	15q-Del	0.474	1
KRAS	7q-Amp	0.474	1
PSIP1	DCDC1	0.474	1
PSIP1	EXOSC10	0.474	1
PSIP1	ZNF750	0.474	1
PSIP1	Del_1p36.11	0.474	1
RUNX1	DENND5B	0.474	1
RUNX1	RBM26	0.474	1
RUNX1	7q-Amp	0.474	1
RUNX1	15q-Del	0.474	1
ZBTB7B	Del_9p21.3	0.474	1
CASP8	DENND5B	0.474	1
CASP8	15q-Del	0.474	1
CPD	3q-Amp	0.474	1
CPD	Del_15q13.1	0.474	1
DENND5B	EXOSC10	0.474	1
DENND5B	ZNF750	0.474	1
DENND5B	BAP1	0.474	1
DENND5B	CDH1	0.474	1
DENND5B	1q-Amp	0.474	1
DENND5B	Del_1p36.11	0.474	1
EXOSC10	7q-Amp	0.474	1
IKZF2	15q-Del	0.474	1
PSMC6	Del_9p21.3	0.474	1
RBM10	10q-Del	0.474	1
RBM26	THRAP3	0.474	1
RBM26	EPS8	0.474	1
RBM26	Del_1p36.11	0.474	1
SF3B3	3q-Amp	0.474	1
SF3B3	6q-Del	0.474	1
ZNF750	15q-Del	0.474	1
BAP1	15q-Del	0.474	1
CNOT1	3q-Amp	0.474	1
EPS8	7q-Amp	0.474	1
FAM47C	Del_15q13.1	0.474	1
7q-Amp	Del_1p36.11	0.474	1
Amp_6q21	Del_9p21.3	0.474	1
KDM6A	KRAS	0.475	1
KDM6A	BAP1	0.475	1
KDM6A	CDH1	0.475	1
KDM6A	1q-Amp	0.475	1
KDM6A	Del_1p36.11	0.475	1
NHLRC1	Amp_1q21.3	0.475	1
PIK3CA	PTTG1IP	0.475	1
DLX6	Del_10q23.31	0.475	1
PPARG	Amp_6p22.3	0.475	1
TAF11	Amp_1q21.3	0.475	1
USP28	Amp_6p22.3	0.475	1
SCARF2	Amp_1q21.3	0.475	1
ZNF185	Amp_3q26.33	0.475	1
Amp_6p22.3	Del_Xp11.3	0.475	1
ATM	DENND5B	0.476	1
CNNM4	8p-Del	0.476	1
MIPOL1	8p-Del	0.476	1
PIK3CA	Amp_8q22.3	0.476	1
RB1	Amp_3p25.2	0.476	1
DENND5B	Del_4q34.2	0.476	1
FAT1	Del_4q22.1	0.476	1
NDC80	Amp_8q22.3	0.476	1
PPARGC1A	8p-Del	0.476	1
RARG	Amp_8q22.3	0.476	1
RBM26	Del_4q34.2	0.476	1
TFG	8p-Del	0.476	1
20q-Amp	Del_4q22.1	0.476	1
7p-Amp	Del_8p21.3	0.476	1
9p-Del	Amp_3p25.2	0.476	1
Amp_7p11.2	Del_2q34	0.476	1
Amp_16p13.2	Del_11q25	0.476	1
ARID1A	7p-Amp	0.477	1
ARID1A	4q-Del	0.477	1
CDKN1A	Del_13q14.2	0.477	1
RB1	6q-Del	0.477	1
STAG2	TSC1	0.477	1
GLTP	Del_14q24.1	0.477	1
UBA52	18q-Del	0.477	1
UBA52	Del_14q24.1	0.477	1
ZBTB47	18q-Del	0.477	1
FUS	Del_2q37.1	0.477	1
HLA-A	Del_14q24.1	0.477	1
UNC93B1	18q-Del	0.477	1
Amp_7p11.2	Del_22q13.32	0.477	1
Amp_12q15	Del_6p25.3	0.477	1
Amp_12q15	Del_16q23.1	0.477	1
FGFR3	Del_6q27	0.478	1
HORMAD1	8q-Amp	0.478	1
HORMAD1	Del_18q23	0.478	1
NF2	8q-Amp	0.478	1
RHOA	Del_4q22.1	0.478	1
STAG2	Amp_7p21.1	0.478	1
ZBTB7B	8q-Amp	0.478	1
ARID2	4q-Del	0.478	1
DPYS	Del_2q34	0.478	1
MARK2	Del_2q34	0.478	1
PPP4R1	Del_2q34	0.478	1
PSMC6	8q-Amp	0.478	1
STK32B	Del_18q23	0.478	1
ARID1B	5p-Amp	0.478	1
ZNF773	8q-Amp	0.478	1
ZNF773	Del_18q23	0.478	1
8q-Amp	Amp_6q21	0.478	1
4q-Del	Amp_20q11.21	0.478	1
Del_2q34	Del_Xp11.3	0.478	1
CDKN1A	EPHA2	0.479	1
CDKN1A	HFM1	0.479	1
CREBBP	Amp_6p22.3	0.479	1
ELF3	KLF5	0.479	1
ELF3	PARD3	0.479	1
EP300	STAG2	0.479	1
FGFR3	Amp_11q13.3	0.479	1
HIST1H3B	KLF5	0.479	1
HIST1H3B	7p-Amp	0.479	1
HIST1H3B	4q-Del	0.479	1
KDM6A	Amp_8p11.23	0.479	1
KLF5	TMCO4	0.479	1
KLF5	Del_1q32.1	0.479	1
STAG2	Del_10q23.31	0.479	1
HFM1	11q-Del	0.479	1
HFM1	Del_19p13.3	0.479	1
KDM5A	5q-Del	0.479	1
PARD3	TMCO4	0.479	1
PARD3	Del_1q32.1	0.479	1
PARD3	Del_3p14.2	0.479	1
ARID1B	Amp_17q23.3	0.479	1
ARID1B	Del_1q32.1	0.479	1
ARID1B	Del_Xq21.33	0.479	1
GNA13	7p-Amp	0.479	1
GNA13	4q-Del	0.479	1
17q-Amp	7p-Amp	0.479	1
17q-Amp	4q-Del	0.479	1
20q-Amp	Amp_1p34.2	0.479	1
7p-Amp	Del_1q32.1	0.479	1
17p-Del	Amp_8p11.23	0.479	1
4q-Del	Amp_17q23.3	0.479	1
4q-Del	Del_1q32.1	0.479	1
Amp_1p34.2	Del_11q23.3	0.479	1
Amp_6p22.3	Del_11q25	0.479	1
Amp_8p11.23	Amp_11q13.3	0.479	1
ARID1A	4p-Del	0.48	1
HORMAD1	Amp_22q12.2	0.48	1
HRAS	18q-Del	0.48	1
HRAS	Del_14q24.1	0.48	1
NF2	Amp_22q12.2	0.48	1
RB1	ZNF180	0.48	1
RB1	NAA15	0.48	1
RB1	RARG	0.48	1
RB1	19q-Amp	0.48	1
RB1	Del_18q23	0.48	1
RXRA	SPTAN1	0.48	1
SF3B1	SPTAN1	0.48	1
STAG2	Amp_1q21.3	0.48	1
ZBTB7B	Amp_22q12.2	0.48	1
ZFP36L2	Del_14q24.1	0.48	1
ZNF180	9p-Del	0.48	1
ACTB	18q-Del	0.48	1
ACTB	Del_14q24.1	0.48	1
DDX3X	9p-Del	0.48	1
PSMC6	Amp_22q12.2	0.48	1
RARG	9p-Del	0.48	1
RBM26	Del_8p23.3	0.48	1
RIPK4	18q-Del	0.48	1
ZNF626	18q-Del	0.48	1
SPTAN1	Amp_11q22.2	0.48	1
ZNF773	Amp_22q12.2	0.48	1
7q-Amp	Del_8p23.3	0.48	1
8q-Amp	9p-Del	0.48	1
16p-Del	Amp_7p11.2	0.48	1
22q-Del	Amp_7p11.2	0.48	1
9p-Del	Amp_4q13.3	0.48	1
C12orf43	Amp_19q13.43	0.481	1
HIST1H2AG	Amp_19q13.43	0.481	1
NHLRC1	Amp_19q13.43	0.481	1
TSC1	3q-Amp	0.481	1
TSC1	Del_15q13.1	0.481	1
CCNE2	Amp_19q13.43	0.481	1
PHLDA3	Amp_19q13.43	0.481	1
PPARGC1A	Del_8p21.3	0.481	1
SCARF2	Amp_19q13.43	0.481	1
19p-Del	Amp_19q13.43	0.481	1
CCNE2	Amp_6p22.3	0.482	1
DLX6	Del_4q34.2	0.482	1
MED13	Amp_19q13.43	0.482	1
NAA15	SPTAN1	0.482	1
RARG	SPTAN1	0.482	1
SNRPB	Amp_6p22.3	0.482	1
FUT5	Del_4q34.2	0.482	1
SPTAN1	Amp_4q13.3	0.482	1
SPTAN1	Del_7q36.3	0.482	1
Amp_4q13.3	Amp_7p11.2	0.482	1
Amp_7p11.2	Del_7q36.3	0.482	1
ASXL2	Del_2q34	0.483	1
CFHR4	FAM47C	0.483	1
CREBBP	FOXQ1	0.483	1
CREBBP	RUNX1	0.483	1
CREBBP	THRAP3	0.483	1
CREBBP	WAC	0.483	1
CREBBP	ZNF750	0.483	1
CREBBP	BAP1	0.483	1
CREBBP	Del_1p36.11	0.483	1
CSMD3	Amp_17q23.3	0.483	1
CTNNB1	Del_6q27	0.483	1
DIAPH2	MARK2	0.483	1
DIAPH2	PPP4R1	0.483	1
DIAPH2	USP28	0.483	1
DIAPH2	20q-Amp	0.483	1
DIAPH2	Del_Xp11.3	0.483	1
EP300	Del_9p23	0.483	1
FOXQ1	Del_11q25	0.483	1
GPR50	Del_6q27	0.483	1
GPR50	Del_11q25	0.483	1
PIK3CA	11q-Del	0.483	1
PIK3CA	5q-Del	0.483	1
PROS1	TRERF1	0.483	1
PROS1	FAM47C	0.483	1
RUNX1	Del_6q27	0.483	1
RUNX1	Del_11q25	0.483	1
TBC1D12	ZNF750	0.483	1
TBC1D12	BAP1	0.483	1
CASP8	Amp_7p21.1	0.483	1
CASP8	Del_11q25	0.483	1
CDKN2AIPNL	9q-Del	0.483	1
CPD	DPYS	0.483	1
CPD	20q-Amp	0.483	1
CPD	Del_11q23.3	0.483	1
DCDC1	Del_6q27	0.483	1
DPYS	TRERF1	0.483	1
DPYS	CNOT1	0.483	1
DPYS	FAM47C	0.483	1
EXOSC10	Del_6q27	0.483	1
FAT1	TRERF1	0.483	1
MARK2	RBM10	0.483	1
MARK2	TRERF1	0.483	1
MARK2	CNOT1	0.483	1
MBD1	RBM10	0.483	1
PPARG	RBM10	0.483	1
PPARG	TRERF1	0.483	1
PPP4R1	SF3B3	0.483	1
PPP4R1	TRERF1	0.483	1
PPP4R1	CNOT1	0.483	1
RBM10	USP28	0.483	1
TRERF1	USP28	0.483	1
TRERF1	Del_Xp11.3	0.483	1
WAC	Del_11q25	0.483	1
ZNF750	Amp_7p21.1	0.483	1
CNOT1	Del_Xp11.3	0.483	1
EPS8	Amp_7p21.1	0.483	1
EPS8	Del_11q25	0.483	1
FAM47C	Del_11q23.3	0.483	1
NFE2L2	8q-Amp	0.484	1
NFE2L2	Del_18q23	0.484	1
PSIP1	TSC1	0.484	1
TSC1	7q-Amp	0.484	1
TSC1	15q-Del	0.484	1
20p-Amp	Amp_22q12.2	0.484	1
8q-Amp	22q-Del	0.484	1
ARID1A	5q-Del	0.485	1
C3orf70	DNAH6	0.485	1
CNNM4	9q-Del	0.485	1
GTF2I	HRAS	0.485	1
GTF2I	RIPK4	0.485	1
GTF2I	SLC9A4	0.485	1
GTF2I	ZNF626	0.485	1
GTF2I	CUL1	0.485	1
GTF2I	3p-Amp	0.485	1
HRAS	ITGA4	0.485	1
HRAS	NEK11	0.485	1
HRAS	PPARGC1A	0.485	1
HRAS	SSH3	0.485	1
HRAS	DNAH6	0.485	1
MIPOL1	Del_5q12.1	0.485	1
NF1	FUS	0.485	1
NF1	11q-Del	0.485	1
NF1	5q-Del	0.485	1
PROS1	Amp_20q11.21	0.485	1
SF1	Del_5q12.1	0.485	1
TBC1D12	Del_14q24.1	0.485	1
ZFP36L2	TXNIP	0.485	1
ZNF511	Del_5q12.1	0.485	1
ACTB	SSH3	0.485	1
ACTB	DNAH6	0.485	1
ITGA4	RIPK4	0.485	1
ITGA4	CUL1	0.485	1
MBD1	Amp_20q11.21	0.485	1
MED13	Amp_8q22.3	0.485	1
NEK11	RIPK4	0.485	1
NEK11	3p-Amp	0.485	1
NKX2-2	9q-Del	0.485	1
PPP4R1	Amp_20q11.21	0.485	1
SSH3	CUL1	0.485	1
TFG	9q-Del	0.485	1
TFG	Del_5q12.1	0.485	1
CUL1	DNAH6	0.485	1
DNAH6	3p-Amp	0.485	1
20p-Amp	Del_4q34.2	0.485	1
18q-Del	Amp_7p21.1	0.485	1
CNNM4	4p-Del	0.486	1
CREBBP	Del_13q14.2	0.486	1
CSMD3	Del_14q24.1	0.486	1
ERBB3	ITGA4	0.486	1
ERBB3	NEK11	0.486	1
ERBB3	SSH3	0.486	1
ERBB3	TXNIP	0.486	1
GPS2	CDK12	0.486	1
GPS2	4p-Del	0.486	1
KDM6A	ZNF511	0.486	1
KDM6A	TFG	0.486	1
MIPOL1	4p-Del	0.486	1
SF1	CDK12	0.486	1
SF1	14q-Del	0.486	1
SF1	4p-Del	0.486	1
ZNF511	14q-Del	0.486	1
CDK12	NKX2-2	0.486	1
NKX2-2	4p-Del	0.486	1
TFG	14q-Del	0.486	1
Amp_10p14	Del_14q24.1	0.486	1
ARID1A	18q-Del	0.487	1
ERCC2	NRAS	0.487	1
ERCC2	GLTP	0.487	1
ERCC2	UBA52	0.487	1
ERCC2	HLA-A	0.487	1
ERCC2	UNC93B1	0.487	1
PLCXD3	SPTAN1	0.487	1
AGR3	Amp_7p11.2	0.487	1
ADC	Amp_7p11.2	0.487	1
DAZAP1	SPTAN1	0.487	1
DAZAP1	Amp_7p11.2	0.487	1
5p-Amp	Amp_1p34.2	0.487	1
18q-Del	Amp_5p15.33	0.487	1
GTF2I	9q-Del	0.488	1
METTL3	DDX3X	0.488	1
METTL3	19q-Amp	0.488	1
METTL3	Amp_4q13.3	0.488	1
METTL3	Del_7q36.3	0.488	1
RHOA	RPTN	0.488	1
RHOA	NAA15	0.488	1
RHOA	RARG	0.488	1
RHOA	Del_7q36.3	0.488	1
RPTN	SHANK1	0.488	1
SHANK1	19q-Amp	0.488	1
SHANK1	Amp_4q13.3	0.488	1
SHANK1	Del_7q36.3	0.488	1
PPARGC1A	Del_5q12.1	0.488	1
DNAH6	Del_5q12.1	0.488	1
Amp_13q22.1	Del_9p23	0.488	1
ARID1A	Del_6p25.3	0.489	1
ASXL2	ZFP36L1	0.489	1
ASXL2	ARID2	0.489	1
CFHR4	Amp_1q23.3	0.489	1
CFHR4	Del_11q23.3	0.489	1
CREBBP	Amp_8q22.3	0.489	1
CSMD3	6q-Del	0.489	1
ERBB3	5q-Del	0.489	1
PIK3CA	Del_Xq21.33	0.489	1
PROS1	FAT1	0.489	1
PROS1	20q-Amp	0.489	1
PROS1	Del_11q23.3	0.489	1
TBC1D12	Amp_8q22.3	0.489	1
CTCF	Del_11q23.3	0.489	1
DPYS	FAT1	0.489	1
DPYS	20q-Amp	0.489	1
DPYS	Amp_1q23.3	0.489	1
HSP90AA1	Del_5q12.1	0.489	1
MARK2	20q-Amp	0.489	1
PPARG	Del_11q23.3	0.489	1
ASXL1	9q-Del	0.489	1
ASXL1	Del_5q12.1	0.489	1
CDKN2A	9p-Del	0.49	1
ERBB3	Amp_11q13.3	0.49	1
HIST1H3B	Amp_3q26.33	0.49	1
HIST1H3B	Amp_11q13.3	0.49	1
METTL3	Del_9p21.3	0.49	1
RB1	Amp_3q26.33	0.49	1
LETMD1	Amp_20q11.21	0.49	1
SNRPB	Amp_20q11.21	0.49	1
GNA13	Amp_11q13.3	0.49	1
SCARF2	Amp_20q11.21	0.49	1
TMCO4	Amp_3q26.33	0.49	1
17q-Amp	Amp_3q26.33	0.49	1
Amp_3q26.33	Del_1q32.1	0.49	1
ARID1A	TBC1D12	0.491	1
ARID1A	Amp_7p21.1	0.491	1
C3orf70	11p-Del	0.491	1
EP300	SLC9A4	0.491	1
EP300	Del_17p12	0.491	1
HRAS	17p-Del	0.491	1
ACTB	11p-Del	0.491	1
RIPK4	17p-Del	0.491	1
ZNF626	11p-Del	0.491	1
DIAPH2	FBXW7	0.492	1
FBXW7	CPD	0.492	1
FBXW7	SF3B3	0.492	1
FBXW7	FAM47C	0.492	1
PKHD1	RBM10	0.492	1
PKHD1	TRERF1	0.492	1
PKHD1	CNOT1	0.492	1
TSC1	IL10RB	0.492	1
TSC1	LETMD1	0.492	1
TSC1	SNRPB	0.492	1
CPD	Amp_16p13.2	0.492	1
CNOT1	Amp_16p13.2	0.492	1
CTNNB1	HFM1	0.493	1
CTNNB1	KDM5A	0.493	1
CTNNB1	OGDH	0.493	1
CTNNB1	Amp_4p16.3	0.493	1
ERBB2	KDM6A	0.493	1
FOXA1	HFM1	0.493	1
FOXA1	KDM5A	0.493	1
FOXA1	OGDH	0.493	1
FOXA1	Amp_4p16.3	0.493	1
FOXQ1	HFM1	0.493	1
FOXQ1	KDM5A	0.493	1
FOXQ1	OGDH	0.493	1
FOXQ1	Amp_4p16.3	0.493	1
GPR50	EPHA2	0.493	1
GPR50	KDM5A	0.493	1
GPR50	OGDH	0.493	1
GPR50	Amp_4p16.3	0.493	1
KRAS	KDM5A	0.493	1
KRAS	OGDH	0.493	1
NFE2L3	Amp_4p16.3	0.493	1
PTEN	HFM1	0.493	1
RUNX1	EPHA2	0.493	1
RUNX1	HFM1	0.493	1
RUNX1	KDM5A	0.493	1
RUNX1	Amp_4p16.3	0.493	1
CASP8	EPHA2	0.493	1
CASP8	KDM5A	0.493	1
CASP8	Amp_4p16.3	0.493	1
DCDC1	OGDH	0.493	1
EPHA2	EXOSC10	0.493	1
EPHA2	IKZF2	0.493	1
EPHA2	WAC	0.493	1
EPHA2	BAP1	0.493	1
EPHA2	1q-Amp	0.493	1
EXOSC10	HFM1	0.493	1
HFM1	ZNF750	0.493	1
HFM1	BAP1	0.493	1
HFM1	1q-Amp	0.493	1
KDM5A	THRAP3	0.493	1
KDM5A	BAP1	0.493	1
KDM5A	1q-Amp	0.493	1
KDM5A	Del_1p36.11	0.493	1
NCOA1	BAP1	0.493	1
NCOA1	Del_1p36.11	0.493	1
THRAP3	Amp_4p16.3	0.493	1
ZNF750	Amp_4p16.3	0.493	1
CDH1	Amp_4p16.3	0.493	1
EPS8	Amp_4p16.3	0.493	1
OGDH	Del_1p36.11	0.493	1
Amp_19q13.43	Del_22q13.32	0.493	1
CNNM4	Del_13q14.2	0.494	1
ELF3	Amp_16p13.2	0.494	1
FBXW7	Del_3p14.2	0.494	1
HORMAD1	RXRA	0.494	1
HORMAD1	16p-Del	0.494	1
KPTN	Amp_1q21.3	0.494	1
NF2	RXRA	0.494	1
NF2	SF3B1	0.494	1
NF2	Amp_11q22.2	0.494	1
NFE2L2	PSMC6	0.494	1
NFE2L2	STK32B	0.494	1
NFE2L2	Amp_6q21	0.494	1
RXRA	PSMC6	0.494	1
RXRA	STK32B	0.494	1
RXRA	ZNF773	0.494	1
RXRA	Amp_6q21	0.494	1
SF3B1	STK32B	0.494	1
SF3B1	CNOT3	0.494	1
SF3B1	ZNF773	0.494	1
SF3B1	Amp_6q21	0.494	1
ZBTB7B	16p-Del	0.494	1
ZBTB7B	22q-Del	0.494	1
ZFP36L1	Del_11p15.5	0.494	1
ZNF511	Del_13q14.2	0.494	1
MED13	Amp_17q23.3	0.494	1
MYO16	PSMC6	0.494	1
PSMC6	16p-Del	0.494	1
PSMC6	22q-Del	0.494	1
STK32B	Amp_11q22.2	0.494	1
CNOT3	22q-Del	0.494	1
CNOT3	Amp_11q22.2	0.494	1
ZNF773	16p-Del	0.494	1
ZNF773	22q-Del	0.494	1
5p-Amp	Del_19p13.3	0.494	1
16p-Del	Amp_6q21	0.494	1
Amp_6q21	Amp_11q22.2	0.494	1
Amp_16p13.2	Del_3p14.2	0.494	1
CREBBP	HSP90AA1	0.495	1
CREBBP	ASXL1	0.495	1
CREBBP	Del_12p13.1	0.495	1
CTNNB1	Del_3p14.2	0.495	1
ELF3	GPR50	0.495	1
ELF3	CASP8	0.495	1
ELF3	WAC	0.495	1
ELF3	ZNF750	0.495	1
ELF3	BAP1	0.495	1
ELF3	Del_1p36.11	0.495	1
ERBB2	Del_8p23.3	0.495	1
ERCC2	ACTB	0.495	1
ERCC2	RIPK4	0.495	1
ERCC2	ZNF626	0.495	1
ERCC2	CUL1	0.495	1
HIST1H3B	HSP90AA1	0.495	1
KRAS	Amp_17q23.3	0.495	1
PTEN	Del_3p14.2	0.495	1
RUNX1	Amp_17q23.3	0.495	1
SF3B1	4p-Del	0.495	1
ZNF180	Amp_13q22.1	0.495	1
CASP8	Del_3p14.2	0.495	1
CDKN2AIPNL	5p-Amp	0.495	1
DDX3X	Amp_12q15	0.495	1
DDX3X	Del_6p25.3	0.495	1
EXOSC10	Del_3p14.2	0.495	1
HSP90AA1	GNA13	0.495	1
HSP90AA1	17q-Amp	0.495	1
HSP90AA1	Del_1q32.1	0.495	1
HSP90AA1	Del_11q25	0.495	1
IKZF2	Amp_17q23.3	0.495	1
IKZF2	Del_3p14.2	0.495	1
MYO16	4p-Del	0.495	1
NAA15	Amp_13q22.1	0.495	1
NDC80	Del_6p25.3	0.495	1
RARG	Amp_12q15	0.495	1
RARG	Amp_13q22.1	0.495	1
ZNF750	Del_3p14.2	0.495	1
ASXL1	17q-Amp	0.495	1
BAP1	Amp_17q23.3	0.495	1
CDH1	Amp_17q23.3	0.495	1
EPS8	Amp_17q23.3	0.495	1
GNA13	Del_12p13.1	0.495	1
17q-Amp	Del_12p13.1	0.495	1
1q-Amp	Del_3p14.2	0.495	1
4p-Del	Amp_11q22.2	0.495	1
6q-Del	Amp_6p22.3	0.495	1
9q-Del	Del_13q14.2	0.495	1
Amp_4q13.3	Amp_13q22.1	0.495	1
Amp_17q23.3	Del_1p36.11	0.495	1
Del_6q27	Del_12p13.1	0.495	1
ARID1A	5p-Amp	0.496	1
PLCXD3	Amp_12q15	0.496	1
AGR3	Del_6p25.3	0.496	1
AGR3	Del_16q23.1	0.496	1
DLX6	Del_2q34	0.496	1
RBP2	Amp_12q15	0.496	1
RBP2	Amp_13q22.1	0.496	1
RBP2	Del_6p25.3	0.496	1
ADC	Del_6p25.3	0.496	1
DAZAP1	Amp_12q15	0.496	1
DAZAP1	Amp_13q22.1	0.496	1
DAZAP1	Del_6p25.3	0.496	1
FUT5	Del_2q34	0.496	1
OGDH	Amp_19q13.43	0.496	1
14q-Del	Amp_10p14	0.496	1
4p-Del	Amp_10p14	0.496	1
IDH1	ARID2	0.497	1
NFE2L2	Amp_12q15	0.497	1
NFE2L2	Del_16q23.1	0.497	1
NRAS	Del_4q22.1	0.497	1
PIGS	ARID2	0.497	1
POTEG	Amp_1p34.2	0.497	1
RXRA	Amp_12q15	0.497	1
RXRA	Amp_13q22.1	0.497	1
SARNP	ZFP36L1	0.497	1
ZNF180	Del_17p12	0.497	1
ARID2	FUS	0.497	1
ARID2	Amp_8p11.21	0.497	1
DDX3X	Del_17p12	0.497	1
FAT1	SPTAN1	0.497	1
MYO16	Amp_12q15	0.497	1
MYO16	Del_6p25.3	0.497	1
UBA52	Del_4q22.1	0.497	1
UGP2	Amp_1p34.2	0.497	1
ZBTB47	Del_4q22.1	0.497	1
FUS	Amp_1p34.2	0.497	1
Amp_11q22.2	Del_16q23.1	0.497	1
PTTG1IP	Amp_6p22.3	0.498	1
TSC1	Amp_12q15	0.498	1
TSC1	Del_6p25.3	0.498	1
TSC1	Del_16q23.1	0.498	1
CPD	Amp_8p11.21	0.498	1
RBM10	Amp_8p11.21	0.498	1
RBM10	Del_2q22.1	0.498	1
SF3B3	Amp_8p11.21	0.498	1
CNOT1	Amp_8p11.21	0.498	1
CDKN2A	MIPOL1	0.499	1
CDKN2A	SF1	0.499	1
CDKN2A	ZNF511	0.499	1
CNNM4	RHOB	0.499	1
CTNNB1	Del_2q37.1	0.499	1
GPR50	Del_2q37.1	0.499	1
GPS2	RHOB	0.499	1
GTF2I	Del_9p23	0.499	1
KRAS	Del_2q37.1	0.499	1
MIPOL1	RHOB	0.499	1
RHOB	ZNF511	0.499	1
NEK11	Del_9p23	0.499	1
TXNIP	Del_13q14.2	0.499	1
ZNF750	Del_2q37.1	0.499	1
CDH1	Del_2q37.1	0.499	1
EPS8	Del_2q37.1	0.499	1
OGDH	Amp_11q13.3	0.499	1
OGDH	Del_10q23.31	0.499	1
KDM6A	Amp_7p11.2	0.5	1
Amp_1q21.3	Del_9p21.3	0.5	1
Amp_22q12.2	Del_9p21.3	0.5	1
CFHR4	15q-Del	0.501	1
CFHR4	Amp_8p11.21	0.501	1
PROS1	7q-Amp	0.501	1
PROS1	Amp_8p11.21	0.501	1
PSIP1	3q-Amp	0.501	1
CTCF	15q-Del	0.501	1
DENND5B	PPARG	0.501	1
DENND5B	USP28	0.501	1
DENND5B	Del_15q13.1	0.501	1
DPYS	7q-Amp	0.501	1
DPYS	Del_2q22.1	0.501	1
MARK2	7q-Amp	0.501	1
MARK2	15q-Del	0.501	1
MARK2	Amp_8p11.21	0.501	1
MARK2	Del_2q22.1	0.501	1
MBD1	7q-Amp	0.501	1
MBD1	15q-Del	0.501	1
PPARG	RBM26	0.501	1
PPARG	15q-Del	0.501	1
PPP4R1	RBM26	0.501	1
PPP4R1	15q-Del	0.501	1
PPP4R1	Amp_8p11.21	0.501	1
RBM26	USP28	0.501	1
RBP2	Del_9p21.3	0.501	1
USP28	7q-Amp	0.501	1
DAZAP1	Del_9p21.3	0.501	1
7q-Amp	10q-Del	0.501	1
7q-Amp	Del_Xp11.3	0.501	1
15q-Del	Del_Xp11.3	0.501	1
NF1	Del_18q23	0.502	1
POTEG	9p-Del	0.502	1
RB1	SARNP	0.502	1
SARNP	9p-Del	0.502	1
ZNF486	9p-Del	0.502	1
ASXL2	Del_11q23.3	0.503	1
BTG2	3q-Amp	0.503	1
BTG2	Del_15q13.1	0.503	1
C12orf43	3q-Amp	0.503	1
C12orf43	6q-Del	0.503	1
CREBBP	Del_9p23	0.503	1
HIST1H2AG	3q-Amp	0.503	1
HIST1H2AG	6q-Del	0.503	1
HIST1H2AG	Del_15q13.1	0.503	1
KDM6A	AGR3	0.503	1
KDM6A	DAZAP1	0.503	1
KPTN	Amp_20q11.21	0.503	1
NF1	Del_11q25	0.503	1
PTTG1IP	Amp_20q11.21	0.503	1
TGIF2LX	3q-Amp	0.503	1
ZFP36L1	HSP90AA1	0.503	1
ZFP36L1	ASXL1	0.503	1
ARID2	Del_12p13.1	0.503	1
CCNE2	3q-Amp	0.503	1
CCNE2	6q-Del	0.503	1
IL10RB	10q-Del	0.503	1
IL10RB	6q-Del	0.503	1
LETMD1	3q-Amp	0.503	1
LETMD1	10q-Del	0.503	1
LETMD1	6q-Del	0.503	1
NKX2-2	5p-Amp	0.503	1
PHLDA3	3q-Amp	0.503	1
PHLDA3	10q-Del	0.503	1
PHLDA3	6q-Del	0.503	1
PHLDA3	Del_15q13.1	0.503	1
SLC9A4	8q-Amp	0.503	1
SNRPB	Del_15q13.1	0.503	1
TAF11	10q-Del	0.503	1
TAF11	6q-Del	0.503	1
ZNF626	Del_18q23	0.503	1
SCARF2	10q-Del	0.503	1
Amp_1p34.2	Del_12p13.1	0.503	1
Amp_7p11.2	Del_17p12	0.503	1
FGFR3	Del_3p14.2	0.504	1
KPTN	TP53	0.504	1
PKHD1	TSC1	0.504	1
PLCXD3	20p-Amp	0.504	1
PLCXD3	Del_22q13.32	0.504	1
DENND5B	Del_2q34	0.504	1
DLX6	FAT1	0.504	1
DLX6	Del_11q23.3	0.504	1
RBP2	20p-Amp	0.504	1
RBP2	Del_22q13.32	0.504	1
DAZAP1	Del_22q13.32	0.504	1
FUT5	Del_11q23.3	0.504	1
7q-Amp	Del_2q34	0.504	1
FUT5	Amp_8q22.3	0.505	1
3q-Amp	Amp_7p11.2	0.505	1
18q-Del	Amp_8p11.23	0.505	1
Amp_7p11.2	Del_15q13.1	0.505	1
EP300	7p-Amp	0.506	1
IDH1	TP53	0.506	1
NRAS	TP53	0.506	1
TP53	ZBTB47	0.506	1
ARID1B	17p-Del	0.506	1
5p-Amp	Del_11q25	0.506	1
7p-Amp	11p-Del	0.506	1
7p-Amp	17p-Del	0.506	1
FGFR3	6q-Del	0.507	1
HORMAD1	TP53	0.507	1
STAG2	Del_15q13.1	0.507	1
TP53	PSMC6	0.507	1
TP53	STK32B	0.507	1
ZNF486	Del_8p23.3	0.507	1
DENND5B	9p-Del	0.507	1
GLTP	Amp_17q12	0.507	1
ITGA4	DNAH6	0.507	1
NEK11	TXNIP	0.507	1
PPARGC1A	TXNIP	0.507	1
SSH3	TXNIP	0.507	1
UBA52	Amp_17q12	0.507	1
7q-Amp	9p-Del	0.507	1
C3orf70	RPTN	0.508	1
C3orf70	ZNF180	0.508	1
C3orf70	NAA15	0.508	1
C3orf70	Amp_4q13.3	0.508	1
HRAS	RPTN	0.508	1
HRAS	ZNF180	0.508	1
HRAS	DDX3X	0.508	1
HRAS	NDC80	0.508	1
HRAS	19q-Amp	0.508	1
HRAS	Del_7q36.3	0.508	1
RPTN	RIPK4	0.508	1
RPTN	SLC9A4	0.508	1
RPTN	20p-Amp	0.508	1
TP53	USP28	0.508	1
ZFP36L2	NDC80	0.508	1
ZNF180	ACTB	0.508	1
ZNF180	SLC9A4	0.508	1
ZNF180	CUL1	0.508	1
ZNF180	20p-Amp	0.508	1
ZNF180	3p-Amp	0.508	1
ACTB	DDX3X	0.508	1
ACTB	RARG	0.508	1
ACTB	19q-Amp	0.508	1
ACTB	Amp_4q13.3	0.508	1
ACTB	Del_7q36.3	0.508	1
DDX3X	SLC9A4	0.508	1
DDX3X	20p-Amp	0.508	1
NAA15	RIPK4	0.508	1
NAA15	SLC9A4	0.508	1
NAA15	3p-Amp	0.508	1
NDC80	RIPK4	0.508	1
NDC80	SLC9A4	0.508	1
NDC80	ZNF626	0.508	1
NDC80	3p-Amp	0.508	1
RARG	RIPK4	0.508	1
RARG	ZNF626	0.508	1
RARG	CUL1	0.508	1
RARG	20p-Amp	0.508	1
RIPK4	Amp_4q13.3	0.508	1
RIPK4	Del_7q36.3	0.508	1
SLC9A4	Amp_4q13.3	0.508	1
SLC9A4	Del_7q36.3	0.508	1
ZNF626	19q-Amp	0.508	1
ZNF626	Amp_4q13.3	0.508	1
CUL1	Amp_4q13.3	0.508	1
CUL1	Del_7q36.3	0.508	1
OGDH	Del_8p21.3	0.508	1
19q-Amp	20p-Amp	0.508	1
3p-Amp	Amp_4q13.3	0.508	1
Amp_4p16.3	Del_8p21.3	0.508	1
C3orf70	TP53	0.509	1
CDKN1A	RHOA	0.509	1
CDKN1A	ARID2	0.509	1
CDKN1A	Amp_1p34.2	0.509	1
METTL3	Del_19p13.3	0.509	1
SHANK1	11q-Del	0.509	1
SHANK1	5q-Del	0.509	1
TP53	ZFP36L2	0.509	1
TP53	EPHA2	0.509	1
TP53	OGDH	0.509	1
ZFP36L1	11q-Del	0.509	1
ZFP36L1	5q-Del	0.509	1
ZFP36L1	Del_19p13.3	0.509	1
ARID2	11q-Del	0.509	1
ARID2	Del_19p13.3	0.509	1
TXNIP	Del_8p23.3	0.509	1
ZBTB47	Del_9p23	0.509	1
CUL1	Amp_1q21.3	0.509	1
DNAH6	Del_8p23.3	0.509	1
CDKN2A	18q-Del	0.51	1
CDKN2A	Del_14q24.1	0.51	1
ELF3	ASXL1	0.51	1
ERCC2	Del_11q25	0.51	1
HORMAD1	PARD3	0.51	1
KLF5	NF2	0.51	1
KLF5	STK32B	0.51	1
KLF5	Amp_6q21	0.51	1
RHOB	Del_14q24.1	0.51	1
TP53	RBM10	0.51	1
TP53	CNOT1	0.51	1
ZBTB7B	4q-Del	0.51	1
ZFP36L2	Del_4q22.1	0.51	1
ACTB	Del_4q22.1	0.51	1
HSP90AA1	Del_3p14.2	0.51	1
PARD3	Amp_6q21	0.51	1
PSMC6	4q-Del	0.51	1
STK32B	7p-Amp	0.51	1
ZNF626	Del_4q22.1	0.51	1
ARID1B	CNOT3	0.51	1
ASXL1	Del_3p14.2	0.51	1
CUL1	Del_4q22.1	0.51	1
ZNF773	7p-Amp	0.51	1
ZNF773	4q-Del	0.51	1
3p-Amp	Del_4q22.1	0.51	1
DIAPH2	KDM6A	0.511	1
DIAPH2	17q-Amp	0.511	1
DIAPH2	Del_Xq21.33	0.511	1
FBXW7	RB1	0.511	1
HIST1H3B	SF3B3	0.511	1
HIST1H3B	CNOT1	0.511	1
HIST1H3B	FAM47C	0.511	1
KDM6A	CPD	0.511	1
KDM6A	TRERF1	0.511	1
PKHD1	9p-Del	0.511	1
RB1	ATAD5	0.511	1
TP53	ARID2	0.511	1
CDK12	8p-Del	0.511	1
CPD	17q-Amp	0.511	1
CPD	Del_1q32.1	0.511	1
DLX6	Del_2q22.1	0.511	1
MED13	9p-Del	0.511	1
RBM10	GNA13	0.511	1
RBM10	TMCO4	0.511	1
RBM10	17q-Amp	0.511	1
RBM10	Del_1q32.1	0.511	1
SF3B3	TMCO4	0.511	1
SF3B3	17q-Amp	0.511	1
TRERF1	Del_1q32.1	0.511	1
CNOT1	TMCO4	0.511	1
FAM47C	17q-Amp	0.511	1
FAM47C	Del_1q32.1	0.511	1
FUT5	Amp_8p11.21	0.511	1
FUT5	Del_2q22.1	0.511	1
ZNF185	Amp_8p11.21	0.511	1
ZNF185	Del_2q22.1	0.511	1
C12orf43	Amp_3p25.2	0.512	1
CFHR4	Amp_19q12	0.512	1
ERBB2	CTCF	0.512	1
FGFR3	RHOA	0.512	1
FOXA1	METTL3	0.512	1
GPR50	SHANK1	0.512	1
HIST1H2AG	Amp_3p25.2	0.512	1
KRAS	RHOA	0.512	1
KRAS	SHANK1	0.512	1
METTL3	PTEN	0.512	1
METTL3	EXOSC10	0.512	1
METTL3	ZNF750	0.512	1
METTL3	1q-Amp	0.512	1
METTL3	Amp_8p11.23	0.512	1
METTL3	Del_1p36.11	0.512	1
NFE2L3	RHOA	0.512	1
PKHD1	TP53	0.512	1
PTEN	RHOA	0.512	1
PTEN	SHANK1	0.512	1
RHOA	RUNX1	0.512	1
RHOA	CASP8	0.512	1
RHOA	DCDC1	0.512	1
RHOA	EXOSC10	0.512	1
RHOA	IKZF2	0.512	1
RHOA	WAC	0.512	1
RHOA	ZNF750	0.512	1
RHOA	BAP1	0.512	1
RHOA	EPS8	0.512	1
RHOA	1q-Amp	0.512	1
RHOA	Del_1p36.11	0.512	1
SHANK1	CASP8	0.512	1
SHANK1	EXOSC10	0.512	1
SHANK1	WAC	0.512	1
SHANK1	ZNF750	0.512	1
SHANK1	CDH1	0.512	1
SHANK1	1q-Amp	0.512	1
SHANK1	Amp_8p11.23	0.512	1
TSC1	HFM1	0.512	1
TSC1	OGDH	0.512	1
DPYS	Amp_19q12	0.512	1
DPYS	Del_9p21.3	0.512	1
PHLDA3	Amp_3p25.2	0.512	1
PPARG	Amp_19q12	0.512	1
19p-Del	Amp_3p25.2	0.512	1
Amp_19q12	Del_Xp11.3	0.512	1
ATM	EPHA2	0.513	1
ELF3	Del_13q14.2	0.513	1
ERBB2	CPD	0.513	1
ERBB2	TRERF1	0.513	1
ERBB2	FAM47C	0.513	1
ERBB3	RBP2	0.513	1
ERBB3	ADC	0.513	1
ERBB3	Amp_19q13.43	0.513	1
MIPOL1	Amp_22q12.2	0.513	1
SF1	Amp_22q12.2	0.513	1
CPD	Amp_19q12	0.513	1
CTCF	Amp_3p25.2	0.513	1
EPHA2	Del_4q34.2	0.513	1
PPARG	Amp_3p25.2	0.513	1
SF3B3	Amp_19q12	0.513	1
USP28	Amp_3p25.2	0.513	1
OGDH	Del_4q34.2	0.513	1
7p-Amp	Del_17p12	0.513	1
Amp_3p25.2	Del_Xp11.3	0.513	1
BTG2	PKHD1	0.514	1
BTG2	Amp_16p13.2	0.514	1
C12orf43	FBXW7	0.514	1
C12orf43	Amp_16p13.2	0.514	1
CSMD3	ERCC2	0.514	1
ERBB3	TP53	0.514	1
FBXW7	HIST1H2AG	0.514	1
FBXW7	NHLRC1	0.514	1
FBXW7	CCNE2	0.514	1
FBXW7	PHLDA3	0.514	1
FBXW7	19p-Del	0.514	1
GTF2I	18q-Del	0.514	1
HIST1H2AG	PKHD1	0.514	1
HIST1H2AG	ATAD5	0.514	1
NHLRC1	MED13	0.514	1
PKHD1	TGIF2LX	0.514	1
SF3B1	20p-Amp	0.514	1
SF3B1	Del_22q13.32	0.514	1
ATAD5	PHLDA3	0.514	1
CCNE2	Amp_16p13.2	0.514	1
HFM1	Del_2q37.1	0.514	1
LETMD1	Amp_16p13.2	0.514	1
MED13	PHLDA3	0.514	1
MED13	SCARF2	0.514	1
MED13	19p-Del	0.514	1
MYO16	Del_22q13.32	0.514	1
NCOA1	Del_2q37.1	0.514	1
NEK11	Del_14q24.1	0.514	1
SNRPB	Amp_16p13.2	0.514	1
SSH3	18q-Del	0.514	1
DNAH6	18q-Del	0.514	1
SCARF2	Amp_16p13.2	0.514	1
CDKN2A	RXRA	0.515	1
CDKN2A	16p-Del	0.515	1
TP53	Del_11q25	0.515	1
CREBBP	Del_3p14.2	0.516	1
ELF3	Amp_7p21.1	0.516	1
NFE2L2	Amp_8q22.3	0.516	1
TBC1D12	Amp_17q23.3	0.516	1
TBC1D12	Del_3p14.2	0.516	1
TRERF1	8p-Del	0.516	1
FAM47C	8p-Del	0.516	1
20q-Amp	Del_2q34	0.516	1
Amp_17q23.3	Del_11q25	0.516	1
CDKN1A	UBA52	0.517	1
CDKN1A	HLA-A	0.517	1
CDKN1A	UNC93B1	0.517	1
NRAS	11q-Del	0.517	1
NRAS	Del_19p13.3	0.517	1
GLTP	11q-Del	0.517	1
GLTP	5q-Del	0.517	1
GLTP	Del_19p13.3	0.517	1
UBA52	11q-Del	0.517	1
UBA52	Del_19p13.3	0.517	1
ZBTB47	Del_19p13.3	0.517	1
HLA-A	Del_19p13.3	0.517	1
UNC93B1	5q-Del	0.517	1
FGFR3	HORMAD1	0.518	1
FGFR3	ZBTB7B	0.518	1
FGFR3	PSMC6	0.518	1
HORMAD1	Amp_8p11.23	0.518	1
HORMAD1	Del_16p13.3	0.518	1
KLF5	CDK12	0.518	1
KLF5	14q-Del	0.518	1
KLF5	4p-Del	0.518	1
KPTN	Amp_3p25.2	0.518	1
NF2	Amp_8p11.23	0.518	1
NF2	Del_16p13.3	0.518	1
PKHD1	Amp_1q21.3	0.518	1
PTTG1IP	Amp_3p25.2	0.518	1
STAG2	Del_17p12	0.518	1
CDK12	7p-Amp	0.518	1
DENND5B	20q-Amp	0.518	1
PARD3	14q-Del	0.518	1
PSMC6	Amp_8p11.23	0.518	1
STK32B	Del_16p13.3	0.518	1
ARID1B	14q-Del	0.518	1
Amp_8p11.23	Del_17p12	0.518	1
ATM	Amp_19q12	0.519	1
CFHR4	Amp_4p16.3	0.519	1
PIK3CA	NEK11	0.519	1
PIK3CA	DNAH6	0.519	1
PKHD1	RBM26	0.519	1
PKHD1	7q-Amp	0.519	1
PROS1	EPHA2	0.519	1
PROS1	OGDH	0.519	1
PROS1	Amp_4p16.3	0.519	1
CTCF	OGDH	0.519	1
DPYS	OGDH	0.519	1
DPYS	Amp_4p16.3	0.519	1
EPHA2	MBD1	0.519	1
EPHA2	PPP4R1	0.519	1
EPHA2	USP28	0.519	1
HFM1	MARK2	0.519	1
HFM1	PPARG	0.519	1
HFM1	Del_Xp11.3	0.519	1
KDM5A	MARK2	0.519	1
MBD1	NCOA1	0.519	1
MED13	15q-Del	0.519	1
NCOA1	Del_Xp11.3	0.519	1
PPARG	OGDH	0.519	1
PPP4R1	Amp_4p16.3	0.519	1
RBM26	Amp_16p13.2	0.519	1
USP28	Amp_4p16.3	0.519	1
FUT5	Amp_19q12	0.519	1
ZNF185	Amp_19q12	0.519	1
15q-Del	Amp_16p13.2	0.519	1
C12orf43	Del_11p15.5	0.52	1
EP300	ERBB2	0.52	1
GPR50	SPTAN1	0.52	1
HIST1H2AG	Del_11p15.5	0.52	1
KLF5	8q-Amp	0.52	1
NHLRC1	Del_11p15.5	0.52	1
PIK3CA	Del_8p23.3	0.52	1
PTEN	SPTAN1	0.52	1
RUNX1	SPTAN1	0.52	1
CASP8	SPTAN1	0.52	1
CASP8	Amp_7p11.2	0.52	1
CDK12	Del_4q22.1	0.52	1
EXOSC10	Amp_7p11.2	0.52	1
IL10RB	Del_11p15.5	0.52	1
LETMD1	Del_11p15.5	0.52	1
PHLDA3	Del_11p15.5	0.52	1
RBM26	Del_9p21.3	0.52	1
ZNF626	Amp_6p22.3	0.52	1
ZNF750	Amp_7p11.2	0.52	1
CDH1	Amp_7p11.2	0.52	1
SPTAN1	Del_1p36.11	0.52	1
1q-Amp	Amp_7p11.2	0.52	1
Amp_7p11.2	Del_1p36.11	0.52	1
CREBBP	Amp_3q26.33	0.521	1
TBC1D12	Del_10q23.31	0.521	1
Amp_7p21.1	Amp_11q13.3	0.521	1
Amp_11q13.3	Del_6q27	0.521	1
ATM	CDKN2A	0.522	1
EP300	SF1	0.522	1
ERBB3	Del_7q36.3	0.522	1
HIST1H3B	Del_2q34	0.522	1
IDH1	14q-Del	0.522	1
IDH1	4p-Del	0.522	1
KDM6A	Del_2q34	0.522	1
PIGS	14q-Del	0.522	1
SARNP	4p-Del	0.522	1
SF1	11p-Del	0.522	1
SF1	17p-Del	0.522	1
ZNF486	4p-Del	0.522	1
CDK12	OR10Z1	0.522	1
TFG	11p-Del	0.522	1
TFG	17p-Del	0.522	1
Amp_8p11.23	Del_2q37.1	0.522	1
Del_11q23.3	Del_16q23.1	0.522	1
ERBB2	Amp_3p25.2	0.523	1
HIST1H2AG	Amp_8q22.3	0.523	1
NHLRC1	Amp_8q22.3	0.523	1
NRAS	PIK3CA	0.523	1
PROS1	Del_11p15.5	0.523	1
PTTG1IP	Del_11p15.5	0.523	1
CCNE2	Amp_8q22.3	0.523	1
CTCF	Del_11p15.5	0.523	1
IL10RB	Amp_8q22.3	0.523	1
19p-Del	Amp_8q22.3	0.523	1
8p-Del	Amp_4q13.3	0.523	1
Del_9p23	Del_22q13.32	0.523	1
CREBBP	PROS1	0.524	1
CREBBP	DPYS	0.524	1
CREBBP	USP28	0.524	1
CREBBP	Del_Xp11.3	0.524	1
EP300	PIK3CA	0.524	1
KDM6A	SLC9A4	0.524	1
KDM6A	ZNF626	0.524	1
KDM6A	3p-Amp	0.524	1
PIK3CA	11p-Del	0.524	1
PIK3CA	17p-Del	0.524	1
PROS1	Amp_7p21.1	0.524	1
PROS1	Del_6q27	0.524	1
PROS1	Del_11q25	0.524	1
TBC1D12	MBD1	0.524	1
TBC1D12	USP28	0.524	1
TSC1	Del_5q12.1	0.524	1
CTCF	Amp_7p21.1	0.524	1
CTCF	Del_6q27	0.524	1
MARK2	Amp_7p21.1	0.524	1
MARK2	Del_11q25	0.524	1
PPARG	Amp_7p21.1	0.524	1
PPARG	Del_6q27	0.524	1
PPP4R1	Del_6q27	0.524	1
3q-Amp	Amp_10p14	0.524	1
6q-Del	Amp_12q15	0.524	1
Amp_7p21.1	Del_Xp11.3	0.524	1
Del_11q25	Del_Xp11.3	0.524	1
ASXL2	ZFP36L2	0.525	1
ASXL2	ACTB	0.525	1
C3orf70	Amp_17q12	0.525	1
FBXW7	3q-Amp	0.525	1
FBXW7	6q-Del	0.525	1
HORMAD1	Del_12p13.1	0.525	1
HRAS	Amp_17q12	0.525	1
NF2	Del_12p13.1	0.525	1
PKHD1	6q-Del	0.525	1
ZBTB7B	Del_12p13.1	0.525	1
ATAD5	3q-Amp	0.525	1
ATAD5	10q-Del	0.525	1
CDK12	Del_9p21.3	0.525	1
HSP90AA1	CNOT3	0.525	1
HSP90AA1	Amp_6q21	0.525	1
MED13	Del_15q13.1	0.525	1
PSMC6	Del_12p13.1	0.525	1
SLC9A4	Amp_17q12	0.525	1
ZNF773	Del_12p13.1	0.525	1
3p-Amp	Amp_17q12	0.525	1
3q-Amp	Amp_16p13.2	0.525	1
Amp_6q21	Del_12p13.1	0.525	1
Del_4q34.2	Del_9p21.3	0.525	1
ARID1A	Amp_17q23.3	0.526	1
ARID1A	Del_3p14.2	0.526	1
ARID1A	Del_22q13.32	0.526	1
CDKN2A	Amp_5p15.33	0.526	1
CREBBP	FUT5	0.526	1
ELF3	Amp_5p15.33	0.526	1
NF1	SNRPB	0.526	1
NF1	TAF11	0.526	1
NF1	19p-Del	0.526	1
RHOB	Amp_5p15.33	0.526	1
TBC1D12	FUT5	0.526	1
TBC1D12	ZNF185	0.526	1
CDK12	Amp_8q22.3	0.526	1
DLX6	Del_6q27	0.526	1
DLX6	Del_11q25	0.526	1
FUT5	Amp_7p21.1	0.526	1
FUT5	Del_11q25	0.526	1
Amp_5p15.33	Amp_17q23.3	0.526	1
ARID1A	Amp_11q13.3	0.527	1
ARID1A	Del_12p13.1	0.527	1
POTEG	Amp_10p14	0.527	1
GLTP	Amp_19q13.43	0.527	1
MYO16	Del_2q37.1	0.527	1
UBA52	Amp_19q13.43	0.527	1
ARID1B	Amp_12q15	0.527	1
ARID1B	Amp_13q22.1	0.527	1
FUS	Amp_10p14	0.527	1
HLA-A	Amp_19q13.43	0.527	1
UNC93B1	Amp_19q13.43	0.527	1
4q-Del	Amp_12q15	0.527	1
Amp_5p15.33	Del_11q23.3	0.527	1
CNNM4	NFE2L2	0.528	1
CNNM4	RXRA	0.528	1
CNNM4	Amp_11q22.2	0.528	1
CREBBP	DIAPH2	0.528	1
CREBBP	RBM10	0.528	1
CSMD3	RXRA	0.528	1
CSMD3	SF3B1	0.528	1
ERCC2	DNAH6	0.528	1
GPS2	NFE2L2	0.528	1
GPS2	RXRA	0.528	1
GPS2	SF3B1	0.528	1
GPS2	16p-Del	0.528	1
GPS2	Amp_11q22.2	0.528	1
MIPOL1	NFE2L2	0.528	1
MIPOL1	MYO16	0.528	1
MIPOL1	16p-Del	0.528	1
MIPOL1	22q-Del	0.528	1
MIPOL1	Amp_11q22.2	0.528	1
NFE2L2	SF1	0.528	1
NFE2L2	ZNF511	0.528	1
NFE2L2	NKX2-2	0.528	1
NFE2L2	TFG	0.528	1
RXRA	NKX2-2	0.528	1
RXRA	TFG	0.528	1
SF1	SF3B1	0.528	1
SF1	MYO16	0.528	1
SF1	22q-Del	0.528	1
SF3B1	ZNF511	0.528	1
SF3B1	NKX2-2	0.528	1
TBC1D12	CPD	0.528	1
TBC1D12	TRERF1	0.528	1
ZNF511	16p-Del	0.528	1
ZNF511	22q-Del	0.528	1
ZNF511	Amp_11q22.2	0.528	1
NKX2-2	16p-Del	0.528	1
SF3B3	Del_6q27	0.528	1
TFG	16p-Del	0.528	1
TFG	Amp_11q22.2	0.528	1
CNOT1	Amp_7p21.1	0.528	1
FAM47C	Del_6q27	0.528	1
FAM47C	Del_11q25	0.528	1
ARID1A	FOXQ1	0.529	1
ARID1A	EXOSC10	0.529	1
ARID1A	BAP1	0.529	1
ARID1A	CDH1	0.529	1
ASXL2	ERCC2	0.529	1
ASXL2	9p-Del	0.529	1
CDKN1A	EP300	0.529	1
CTNNB1	Amp_5p15.33	0.529	1
DIAPH2	Del_5q12.1	0.529	1
EP300	11q-Del	0.529	1
EP300	5q-Del	0.529	1
EP300	Amp_11q13.3	0.529	1
GPR50	Amp_5p15.33	0.529	1
GTF2I	NDC80	0.529	1
GTF2I	RARG	0.529	1
GTF2I	19q-Amp	0.529	1
GTF2I	Del_7q36.3	0.529	1
HIST1H3B	DENND5B	0.529	1
HIST1H3B	7q-Amp	0.529	1
HIST1H3B	15q-Del	0.529	1
RPTN	SSH3	0.529	1
RPTN	TXNIP	0.529	1
ZFP36L1	CPD	0.529	1
ZFP36L1	RBM10	0.529	1
ARID2	SF3B3	0.529	1
ARID2	TRERF1	0.529	1
ARID2	CNOT1	0.529	1
DCDC1	Amp_5p15.33	0.529	1
DDX3X	NEK11	0.529	1
DDX3X	SSH3	0.529	1
DDX3X	TXNIP	0.529	1
DDX3X	DNAH6	0.529	1
DENND5B	GNA13	0.529	1
DENND5B	TMCO4	0.529	1
EPHA2	3q-Amp	0.529	1
IKZF2	Amp_5p15.33	0.529	1
ITGA4	NAA15	0.529	1
ITGA4	NDC80	0.529	1
ITGA4	RARG	0.529	1
ITGA4	19q-Amp	0.529	1
ITGA4	Del_7q36.3	0.529	1
KDM5A	6q-Del	0.529	1
NAA15	SSH3	0.529	1
NAA15	TXNIP	0.529	1
NCOA1	10q-Del	0.529	1
NCOA1	Del_15q13.1	0.529	1
NDC80	SSH3	0.529	1
NDC80	TXNIP	0.529	1
NDC80	DNAH6	0.529	1
PPARGC1A	RARG	0.529	1
PPARGC1A	19q-Amp	0.529	1
RARG	TXNIP	0.529	1
RBM26	GNA13	0.529	1
RBM26	TMCO4	0.529	1
RBM26	Del_1q32.1	0.529	1
SF3B3	Amp_1p34.2	0.529	1
SF3B3	Del_5q12.1	0.529	1
SSH3	19q-Amp	0.529	1
SSH3	Amp_4q13.3	0.529	1
TXNIP	19q-Amp	0.529	1
ARID1B	Del_11p15.5	0.529	1
CNOT1	Amp_1p34.2	0.529	1
CNOT1	Del_5q12.1	0.529	1
DNAH6	Del_7q36.3	0.529	1
GNA13	7q-Amp	0.529	1
OGDH	3q-Amp	0.529	1
OGDH	Del_15q13.1	0.529	1
15q-Del	Del_1q32.1	0.529	1
6q-Del	Amp_4p16.3	0.529	1
ARID1A	Amp_1q21.3	0.53	1
ATM	TSC1	0.53	1
C3orf70	Amp_20q11.21	0.53	1
FOXA1	RB1	0.53	1
FOXQ1	9p-Del	0.53	1
GPR50	9p-Del	0.53	1
KRAS	RB1	0.53	1
NFE2L3	RB1	0.53	1
NFE2L3	9p-Del	0.53	1
RB1	CASP8	0.53	1
RB1	DCDC1	0.53	1
RB1	IKZF2	0.53	1
RB1	THRAP3	0.53	1
RB1	BAP1	0.53	1
DCDC1	9p-Del	0.53	1
EXOSC10	9p-Del	0.53	1
ZNF750	9p-Del	0.53	1
BAP1	9p-Del	0.53	1
CUL1	Amp_20q11.21	0.53	1
CDKN1A	Del_14q24.1	0.531	1
CNNM4	Del_18q23	0.531	1
ERCC2	Amp_17q23.3	0.531	1
FBXW7	SPTAN1	0.531	1
GPS2	8q-Amp	0.531	1
PLCXD3	Del_14q24.1	0.531	1
RB1	Del_11q25	0.531	1
ZNF511	8q-Amp	0.531	1
AGR3	18q-Del	0.531	1
RBP2	18q-Del	0.531	1
ADC	18q-Del	0.531	1
DAZAP1	18q-Del	0.531	1
ARID1A	GPS2	0.532	1
ARID1A	MIPOL1	0.532	1
ARID1A	SF1	0.532	1
ARID1A	ZNF511	0.532	1
C3orf70	CTNNB1	0.532	1
C3orf70	FOXA1	0.532	1
C3orf70	PTEN	0.532	1
C3orf70	DCDC1	0.532	1
C3orf70	WAC	0.532	1
C3orf70	BAP1	0.532	1
C3orf70	Del_1p36.11	0.532	1
CREBBP	ZFP36L1	0.532	1
CSMD3	CDKN2AIPNL	0.532	1
CTNNB1	ZFP36L2	0.532	1
CTNNB1	ACTB	0.532	1
CTNNB1	SLC9A4	0.532	1
CTNNB1	CUL1	0.532	1
CTNNB1	3p-Amp	0.532	1
FOXA1	ACTB	0.532	1
FOXA1	RIPK4	0.532	1
FOXA1	ZNF626	0.532	1
FOXA1	CUL1	0.532	1
FOXQ1	ACTB	0.532	1
FOXQ1	SLC9A4	0.532	1
GPR50	ACTB	0.532	1
GPR50	RIPK4	0.532	1
HRAS	KRAS	0.532	1
HRAS	PTEN	0.532	1
HRAS	CASP8	0.532	1
HRAS	EXOSC10	0.532	1
HRAS	IKZF2	0.532	1
HRAS	BAP1	0.532	1
HRAS	CDH1	0.532	1
HRAS	EPS8	0.532	1
HRAS	1q-Amp	0.532	1
HRAS	Del_1p36.11	0.532	1
KRAS	RIPK4	0.532	1
NFE2L3	ZNF626	0.532	1
NFE2L3	CUL1	0.532	1
NFE2L3	3p-Amp	0.532	1
PTEN	ZFP36L2	0.532	1
RUNX1	ZNF626	0.532	1
RUNX1	CUL1	0.532	1
ZFP36L2	CASP8	0.532	1
ZFP36L2	EXOSC10	0.532	1
ZFP36L2	IKZF2	0.532	1
ZFP36L2	ZNF750	0.532	1
ZFP36L2	CDH1	0.532	1
ZFP36L2	Del_1p36.11	0.532	1
ZNF511	Amp_5p15.33	0.532	1
ACTB	DCDC1	0.532	1
ACTB	IKZF2	0.532	1
ACTB	WAC	0.532	1
ACTB	CDH1	0.532	1
ACTB	1q-Amp	0.532	1
ACTB	Del_1p36.11	0.532	1
CASP8	3p-Amp	0.532	1
DCDC1	ZNF626	0.532	1
DCDC1	3p-Amp	0.532	1
EXOSC10	RIPK4	0.532	1
EXOSC10	SLC9A4	0.532	1
EXOSC10	ZNF626	0.532	1
EXOSC10	CUL1	0.532	1
EXOSC10	3p-Amp	0.532	1
IKZF2	SLC9A4	0.532	1
IKZF2	ZNF626	0.532	1
IKZF2	CUL1	0.532	1
IKZF2	3p-Amp	0.532	1
NKX2-2	Amp_5p15.33	0.532	1
RIPK4	THRAP3	0.532	1
RIPK4	ZNF750	0.532	1
RIPK4	EPS8	0.532	1
RIPK4	1q-Amp	0.532	1
RIPK4	Del_1p36.11	0.532	1
SLC9A4	ZNF750	0.532	1
SLC9A4	BAP1	0.532	1
SLC9A4	Del_1p36.11	0.532	1
TFG	Amp_5p15.33	0.532	1
THRAP3	ZNF626	0.532	1
THRAP3	CUL1	0.532	1
THRAP3	3p-Amp	0.532	1
WAC	ZNF626	0.532	1
WAC	3p-Amp	0.532	1
ZNF626	BAP1	0.532	1
ZNF626	EPS8	0.532	1
ZNF626	1q-Amp	0.532	1
ZNF626	Del_1p36.11	0.532	1
ZNF750	3p-Amp	0.532	1
BAP1	CUL1	0.532	1
BAP1	3p-Amp	0.532	1
CDH1	3p-Amp	0.532	1
CUL1	EPS8	0.532	1
CUL1	1q-Amp	0.532	1
EPS8	3p-Amp	0.532	1
1q-Amp	3p-Amp	0.532	1
CTNNB1	Amp_13q22.1	0.533	1
FOXA1	Amp_12q15	0.533	1
FOXQ1	Del_16q23.1	0.533	1
GPR50	Amp_12q15	0.533	1
GPR50	Amp_13q22.1	0.533	1
GPR50	Del_6p25.3	0.533	1
KRAS	Amp_12q15	0.533	1
KRAS	Amp_13q22.1	0.533	1
NFE2L3	Amp_12q15	0.533	1
NFE2L3	Del_6p25.3	0.533	1
PSIP1	Amp_8p11.21	0.533	1
PSIP1	Del_2q22.1	0.533	1
CASP8	Amp_13q22.1	0.533	1
CASP8	Del_16q23.1	0.533	1
EXOSC10	Del_16q23.1	0.533	1
FAT1	Del_1q32.1	0.533	1
THRAP3	Amp_12q15	0.533	1
WAC	Amp_12q15	0.533	1
WAC	Amp_13q22.1	0.533	1
ZNF750	Amp_12q15	0.533	1
BAP1	Amp_12q15	0.533	1
CDH1	Amp_12q15	0.533	1
CDH1	Amp_13q22.1	0.533	1
CDH1	Del_6p25.3	0.533	1
EPS8	Amp_12q15	0.533	1
EPS8	Del_6p25.3	0.533	1
17q-Amp	Del_11q23.3	0.533	1
1q-Amp	Amp_12q15	0.533	1
1q-Amp	Del_6p25.3	0.533	1
20q-Amp	Del_Xq21.33	0.533	1
7q-Amp	Del_2q22.1	0.533	1
4q-Del	Amp_1q23.3	0.533	1
Del_1p36.11	Del_16q23.1	0.533	1
CREBBP	Del_8p23.3	0.534	1
ELF3	FUT5	0.534	1
ELF3	ZNF185	0.534	1
EP300	DNAH6	0.534	1
GTF2I	11p-Del	0.534	1
HIST1H3B	Amp_6p22.3	0.534	1
RPTN	Del_5q12.1	0.534	1
DLX6	Del_3p14.2	0.534	1
NEK11	17p-Del	0.534	1
RARG	Del_5q12.1	0.534	1
TXNIP	17p-Del	0.534	1
TMCO4	Amp_6p22.3	0.534	1
ZNF185	Amp_17q23.3	0.534	1
Amp_6p22.3	Del_Xq21.33	0.534	1
Amp_8p11.21	Amp_10p14	0.534	1
CSMD3	Amp_7p11.2	0.535	1
POTEG	8p-Del	0.535	1
SARNP	8p-Del	0.535	1
ZNF486	8p-Del	0.535	1
ARID2	Del_18q23	0.535	1
8q-Amp	Amp_1p34.2	0.535	1
CDKN2A	IDH1	0.536	1
CDKN2A	POTEG	0.536	1
CFHR4	Amp_17q23.3	0.536	1
CFHR4	Del_3p14.2	0.536	1
HORMAD1	Del_9p23	0.536	1
NF2	Amp_8q22.3	0.536	1
RHOB	SARNP	0.536	1
RHOB	ZNF486	0.536	1
RHOB	UGP2	0.536	1
RHOB	FUS	0.536	1
CTCF	Amp_17q23.3	0.536	1
MBD1	Del_3p14.2	0.536	1
PPARG	Del_3p14.2	0.536	1
PPP4R1	Amp_17q23.3	0.536	1
PPP4R1	Del_3p14.2	0.536	1
PSMC6	Amp_8q22.3	0.536	1
USP28	Amp_17q23.3	0.536	1
CNOT3	Del_9p23	0.536	1
Amp_6p22.3	Del_11q23.3	0.536	1
Amp_6q21	Amp_8q22.3	0.536	1
Amp_6q21	Del_9p23	0.536	1
Amp_17q23.3	Del_Xp11.3	0.536	1
CFHR4	RHOA	0.537	1
ERCC2	Del_11p15.5	0.537	1
FBXW7	Del_16p13.3	0.537	1
FGFR3	PKHD1	0.537	1
METTL3	PPARG	0.537	1
METTL3	PPP4R1	0.537	1
NF1	DENND5B	0.537	1
NFE2L2	Amp_22q12.2	0.537	1
PKHD1	Del_16p13.3	0.537	1
RHOA	DPYS	0.537	1
RHOA	MARK2	0.537	1
RHOA	PPARG	0.537	1
RHOA	USP28	0.537	1
RHOA	Del_Xp11.3	0.537	1
RXRA	Amp_22q12.2	0.537	1
SF3B1	Amp_22q12.2	0.537	1
SHANK1	DPYS	0.537	1
ATAD5	Del_16p13.3	0.537	1
22q-Del	Amp_22q12.2	0.537	1
Amp_17q23.3	Del_9p23	0.537	1
BTG2	ARID2	0.538	1
BTG2	Amp_1p34.2	0.538	1
C12orf43	ZFP36L1	0.538	1
EP300	Del_18q23	0.538	1
FGFR3	CDKN2AIPNL	0.538	1
HIST1H2AG	Amp_1p34.2	0.538	1
NF2	Amp_3q26.33	0.538	1
NF2	Amp_11q13.3	0.538	1
NHLRC1	ARID2	0.538	1
PTTG1IP	Del_2q37.1	0.538	1
RHOA	Amp_11q13.3	0.538	1
STAG2	CDKN2AIPNL	0.538	1
TGIF2LX	ZFP36L1	0.538	1
TGIF2LX	Amp_1p34.2	0.538	1
TSC1	UNC93B1	0.538	1
ZFP36L1	TAF11	0.538	1
ARID2	19p-Del	0.538	1
CDKN2AIPNL	Del_16p13.3	0.538	1
IL10RB	Amp_1p34.2	0.538	1
SNRPB	Amp_1p34.2	0.538	1
STK32B	Amp_11q13.3	0.538	1
TAF11	Amp_1p34.2	0.538	1
CNOT3	Amp_3q26.33	0.538	1
CNOT3	Del_10q23.31	0.538	1
SCARF2	Amp_1p34.2	0.538	1
ZNF773	Amp_3q26.33	0.538	1
19p-Del	Amp_1p34.2	0.538	1
Amp_1p34.2	Del_2q37.1	0.538	1
ARID1A	PLCXD3	0.539	1
ARID1A	DAZAP1	0.539	1
PIK3CA	Amp_8p11.23	0.539	1
PIK3CA	Del_11q25	0.539	1
RHOB	PARD3	0.539	1
AGR3	Amp_5p15.33	0.539	1
CDK12	Amp_17q12	0.539	1
FAT1	Del_11q23.3	0.539	1
RBP2	Amp_5p15.33	0.539	1
16p-Del	Del_9p23	0.539	1
Amp_4p16.3	Del_8p23.3	0.539	1
Amp_11q13.3	Amp_22q12.2	0.539	1
CSMD3	SLC9A4	0.54	1
CSMD3	3p-Amp	0.54	1
ERCC2	AGR3	0.54	1
ERCC2	RBP2	0.54	1
ERCC2	DAZAP1	0.54	1
EPHA2	Del_2q34	0.54	1
NCOA1	Del_2q34	0.54	1
OGDH	Del_2q34	0.54	1
20q-Amp	4p-Del	0.54	1
4p-Del	Del_11q23.3	0.54	1
Amp_4p16.3	Del_2q34	0.54	1
C3orf70	11q-Del	0.541	1
C3orf70	5q-Del	0.541	1
CDKN1A	ZFP36L2	0.541	1
CDKN1A	ZNF626	0.541	1
CDKN1A	3p-Amp	0.541	1
DIAPH2	ZBTB7B	0.541	1
DIAPH2	PSMC6	0.541	1
DIAPH2	STK32B	0.541	1
DIAPH2	CNOT3	0.541	1
ERBB2	Del_18q23	0.541	1
HORMAD1	RBM10	0.541	1
HRAS	Del_19p13.3	0.541	1
KDM6A	PROS1	0.541	1
KDM6A	CTCF	0.541	1
KDM6A	MBD1	0.541	1
NF2	TRERF1	0.541	1
NF2	FAM47C	0.541	1
ZBTB7B	SF3B3	0.541	1
ZBTB7B	CNOT1	0.541	1
ZFP36L2	5q-Del	0.541	1
ACTB	11q-Del	0.541	1
ACTB	5q-Del	0.541	1
ACTB	Del_19p13.3	0.541	1
CPD	Amp_6q21	0.541	1
PSMC6	RBM10	0.541	1
PSMC6	FAM47C	0.541	1
RBM10	CNOT3	0.541	1
RBM10	Amp_6q21	0.541	1
RIPK4	11q-Del	0.541	1
SF3B3	CNOT3	0.541	1
SF3B3	Amp_6q21	0.541	1
SLC9A4	11q-Del	0.541	1
STK32B	TRERF1	0.541	1
STK32B	FAM47C	0.541	1
TRERF1	CNOT3	0.541	1
TRERF1	Amp_6q21	0.541	1
ZNF626	Del_19p13.3	0.541	1
CNOT1	CNOT3	0.541	1
CNOT1	Amp_6q21	0.541	1
CNOT3	FAM47C	0.541	1
3p-Amp	Del_19p13.3	0.541	1
CNNM4	7p-Amp	0.542	1
CNNM4	4q-Del	0.542	1
GPS2	4q-Del	0.542	1
KLF5	SF1	0.542	1
KLF5	ZNF511	0.542	1
METTL3	TSC1	0.542	1
MIPOL1	PARD3	0.542	1
MIPOL1	7p-Amp	0.542	1
MIPOL1	4q-Del	0.542	1
SF1	PARD3	0.542	1
SF1	7p-Amp	0.542	1
SF1	4q-Del	0.542	1
ZNF511	ARID1B	0.542	1
ZNF511	4q-Del	0.542	1
CDK12	ASXL1	0.542	1
CDK12	Del_12p13.1	0.542	1
NKX2-2	4q-Del	0.542	1
TFG	4q-Del	0.542	1
ASXL1	Amp_7p11.2	0.542	1
Amp_1q23.3	Del_4q22.1	0.542	1
Amp_7p11.2	Del_12p13.1	0.542	1
ATM	Amp_7p21.1	0.543	1
CDKN2A	Amp_6p22.3	0.543	1
DIAPH2	ELF3	0.543	1
ELF3	CPD	0.543	1
FGFR3	RXRA	0.543	1
FGFR3	SF3B1	0.543	1
SF3B1	Amp_8p11.23	0.543	1
STAG2	16p-Del	0.543	1
STAG2	22q-Del	0.543	1
CCNE2	Del_2q37.1	0.543	1
CPD	Amp_17q23.3	0.543	1
MYO16	Amp_8p11.23	0.543	1
MYO16	Del_16p13.3	0.543	1
NEK11	Del_4q22.1	0.543	1
PARD3	Del_22q13.32	0.543	1
PHLDA3	Del_2q37.1	0.543	1
SF3B3	Del_3p14.2	0.543	1
SNRPB	Del_2q37.1	0.543	1
DNAH6	Del_4q22.1	0.543	1
GNA13	Amp_20q11.21	0.543	1
7p-Amp	Del_22q13.32	0.543	1
Amp_8p11.23	Amp_11q22.2	0.543	1
Amp_11q22.2	Del_16p13.3	0.543	1
Del_4q34.2	Del_11q25	0.543	1
PIGS	Del_5q12.1	0.544	1
PIK3CA	RBM26	0.544	1
PIK3CA	7q-Amp	0.544	1
POTEG	9q-Del	0.544	1
SARNP	9q-Del	0.544	1
ZNF486	9q-Del	0.544	1
ASXL1	11p-Del	0.544	1
17q-Amp	Del_8p23.3	0.544	1
Amp_8p11.21	Amp_12q15	0.544	1
Amp_11q13.3	Del_14q24.1	0.544	1
RPTN	Del_13q14.2	0.545	1
DDX3X	Del_9p21.3	0.545	1
DDX3X	Del_13q14.2	0.545	1
PHLDA3	Del_9p21.3	0.545	1
SCARF2	Del_9p21.3	0.545	1
17q-Amp	Del_2q22.1	0.545	1
19q-Amp	Del_13q14.2	0.545	1
19p-Del	Del_9p21.3	0.545	1
Amp_8p11.21	Del_1q32.1	0.545	1
Amp_8p11.21	Del_Xq21.33	0.545	1
CTNNB1	20p-Amp	0.546	1
CTNNB1	Del_22q13.32	0.546	1
ELF3	Amp_3q26.33	0.546	1
FBXW7	KDM5A	0.546	1
GPR50	20p-Amp	0.546	1
HIST1H3B	EPHA2	0.546	1
HIST1H3B	OGDH	0.546	1
NF1	RB1	0.546	1
NF1	9p-Del	0.546	1
PKHD1	EPHA2	0.546	1
PTEN	20p-Amp	0.546	1
ATAD5	Amp_4p16.3	0.546	1
CASP8	20p-Amp	0.546	1
EPHA2	Amp_16p13.2	0.546	1
EPHA2	Del_Xq21.33	0.546	1
EXOSC10	Del_22q13.32	0.546	1
HFM1	GNA13	0.546	1
HFM1	17q-Amp	0.546	1
HFM1	Del_Xq21.33	0.546	1
IKZF2	20p-Amp	0.546	1
IKZF2	Del_22q13.32	0.546	1
ITGA4	8q-Amp	0.546	1
KDM5A	17q-Amp	0.546	1
KDM5A	Del_Xq21.33	0.546	1
MED13	Amp_4p16.3	0.546	1
NCOA1	GNA13	0.546	1
NCOA1	17q-Amp	0.546	1
PPARGC1A	8q-Amp	0.546	1
SSH3	8q-Amp	0.546	1
THRAP3	20p-Amp	0.546	1
THRAP3	Del_22q13.32	0.546	1
TXNIP	8q-Amp	0.546	1
ZNF750	Del_22q13.32	0.546	1
CDH1	Del_22q13.32	0.546	1
EPS8	20p-Amp	0.546	1
EPS8	Del_22q13.32	0.546	1
GNA13	Amp_4p16.3	0.546	1
OGDH	17q-Amp	0.546	1
OGDH	Amp_16p13.2	0.546	1
17q-Amp	Amp_4p16.3	0.546	1
1q-Amp	Del_22q13.32	0.546	1
5p-Amp	9p-Del	0.546	1
Amp_4p16.3	Del_Xq21.33	0.546	1
Amp_11q13.3	Amp_17q23.3	0.546	1
CREBBP	EP300	0.547	1
EP300	Del_11q25	0.547	1
ERBB2	15q-Del	0.547	1
FOXQ1	Amp_8q22.3	0.547	1
PKHD1	MED13	0.547	1
DCDC1	Amp_8q22.3	0.547	1
DENND5B	Amp_19q12	0.547	1
DLX6	Del_8p21.3	0.547	1
EXOSC10	Amp_8q22.3	0.547	1
NAA15	Del_8p21.3	0.547	1
RBM26	Amp_19q12	0.547	1
ZNF185	Del_8p21.3	0.547	1
8q-Amp	11q-Del	0.547	1
8q-Amp	Del_19p13.3	0.547	1
17p-Del	Amp_7p21.1	0.547	1
Amp_4q13.3	Del_8p21.3	0.547	1
ATM	CNOT3	0.548	1
ATM	Amp_6q21	0.548	1
NRAS	10q-Del	0.548	1
NRAS	6q-Del	0.548	1
ZBTB7B	Del_4q34.2	0.548	1
GLTP	10q-Del	0.548	1
GLTP	Del_15q13.1	0.548	1
UBA52	3q-Amp	0.548	1
UBA52	10q-Del	0.548	1
ZBTB47	10q-Del	0.548	1
ZBTB47	6q-Del	0.548	1
CNOT3	Del_4q34.2	0.548	1
HLA-A	3q-Amp	0.548	1
HLA-A	Del_15q13.1	0.548	1
UNC93B1	6q-Del	0.548	1
UNC93B1	Del_15q13.1	0.548	1
18q-Del	Amp_7p11.2	0.548	1
Amp_10p14	Del_18q23	0.548	1
CDKN1A	Del_2q22.1	0.549	1
KDM6A	Amp_11q13.3	0.549	1
RPTN	18q-Del	0.549	1
RPTN	Del_14q24.1	0.549	1
SARNP	Amp_22q12.2	0.549	1
ZNF180	Del_14q24.1	0.549	1
ZNF486	Amp_22q12.2	0.549	1
AGR3	Del_4q22.1	0.549	1
UGP2	Amp_22q12.2	0.549	1
ADC	Del_4q22.1	0.549	1
FUS	Amp_22q12.2	0.549	1
11q-Del	Amp_8p11.21	0.549	1
18q-Del	Amp_4q13.3	0.549	1
18q-Del	Del_7q36.3	0.549	1
5q-Del	Del_2q22.1	0.549	1
Del_2q22.1	Del_19p13.3	0.549	1
FBXW7	Del_6p25.3	0.55	1
FBXW7	Del_16q23.1	0.55	1
KDM6A	SF3B1	0.55	1
KDM6A	16p-Del	0.55	1
PKHD1	Del_16q23.1	0.55	1
RB1	EPHA2	0.55	1
RB1	NCOA1	0.55	1
ZFP36L1	Del_3p14.2	0.55	1
ARID2	Del_3p14.2	0.55	1
FAT1	Del_9p23	0.55	1
FUT5	SPTAN1	0.55	1
FUT5	Amp_7p11.2	0.55	1
SPTAN1	ZNF185	0.55	1
SPTAN1	Del_5q12.1	0.55	1
Amp_7p11.2	Del_5q12.1	0.55	1
ATM	RHOA	0.551	1
RPTN	DDX3X	0.551	1
RPTN	NDC80	0.551	1
RPTN	RARG	0.551	1
RPTN	19q-Amp	0.551	1
RPTN	Del_7q36.3	0.551	1
SHANK1	Del_4q34.2	0.551	1
ZNF180	Del_7q36.3	0.551	1
CDKN2AIPNL	Amp_3q26.33	0.551	1
CDKN2AIPNL	Amp_11q13.3	0.551	1
CDKN2AIPNL	Del_10q23.31	0.551	1
DDX3X	NAA15	0.551	1
DDX3X	NDC80	0.551	1
DDX3X	Amp_4q13.3	0.551	1
DDX3X	Del_7q36.3	0.551	1
GLTP	Amp_1q21.3	0.551	1
NAA15	NDC80	0.551	1
NAA15	Del_7q36.3	0.551	1
NDC80	RARG	0.551	1
NDC80	Amp_4q13.3	0.551	1
NDC80	Del_7q36.3	0.551	1
RARG	19q-Amp	0.551	1
RARG	Amp_4q13.3	0.551	1
RARG	Del_7q36.3	0.551	1
HLA-A	Amp_1q21.3	0.551	1
19q-Amp	Amp_4q13.3	0.551	1
Amp_17q12	Del_4q22.1	0.551	1
ASXL2	Del_9p21.3	0.552	1
C3orf70	Amp_8p11.23	0.552	1
CTNNB1	GTF2I	0.552	1
CTNNB1	NEK11	0.552	1
CTNNB1	SSH3	0.552	1
CTNNB1	DNAH6	0.552	1
ERCC2	5q-Del	0.552	1
FGFR3	ZFP36L2	0.552	1
FGFR3	SLC9A4	0.552	1
FGFR3	CUL1	0.552	1
FGFR3	Del_2q34	0.552	1
FOXA1	GTF2I	0.552	1
FOXA1	ITGA4	0.552	1
FOXA1	NEK11	0.552	1
FOXA1	PPARGC1A	0.552	1
FOXA1	SSH3	0.552	1
FOXA1	TXNIP	0.552	1
FOXA1	DNAH6	0.552	1
FOXQ1	GTF2I	0.552	1
FOXQ1	PPARGC1A	0.552	1
FOXQ1	TXNIP	0.552	1
GTF2I	KRAS	0.552	1
GTF2I	PTEN	0.552	1
GTF2I	Del_1p36.11	0.552	1
HRAS	Amp_8p11.23	0.552	1
KRAS	TXNIP	0.552	1
KRAS	DNAH6	0.552	1
PIK3CA	CNOT3	0.552	1
PIK3CA	Amp_6q21	0.552	1
PTEN	DNAH6	0.552	1
RUNX1	ITGA4	0.552	1
RUNX1	DNAH6	0.552	1
STAG2	ZFP36L2	0.552	1
ZFP36L2	Del_16p13.3	0.552	1
ACTB	Del_16p13.3	0.552	1
CASP8	TXNIP	0.552	1
DCDC1	NEK11	0.552	1
DCDC1	PPARGC1A	0.552	1
EXOSC10	PPARGC1A	0.552	1
EXOSC10	SSH3	0.552	1
EXOSC10	TXNIP	0.552	1
EXOSC10	DNAH6	0.552	1
IKZF2	NEK11	0.552	1
IKZF2	PPARGC1A	0.552	1
IKZF2	DNAH6	0.552	1
ITGA4	BAP1	0.552	1
NEK11	ZNF750	0.552	1
NEK11	BAP1	0.552	1
PPARGC1A	ZNF750	0.552	1
PPARGC1A	BAP1	0.552	1
PPP4R1	Del_2q37.1	0.552	1
SSH3	THRAP3	0.552	1
SSH3	WAC	0.552	1
SSH3	BAP1	0.552	1
SSH3	EPS8	0.552	1
SSH3	Del_1p36.11	0.552	1
TXNIP	WAC	0.552	1
TXNIP	ZNF750	0.552	1
TXNIP	BAP1	0.552	1
TXNIP	1q-Amp	0.552	1
TXNIP	Del_1p36.11	0.552	1
ZNF750	DNAH6	0.552	1
CDH1	DNAH6	0.552	1
DNAH6	Del_1p36.11	0.552	1
Amp_8p11.23	Del_2q34	0.552	1
COPZ2	RB1	0.553	1
ERCC2	Del_5q12.1	0.553	1
PTTG1IP	RB1	0.553	1
PTTG1IP	9p-Del	0.553	1
SARNP	Del_13q14.2	0.553	1
UGP2	Del_13q14.2	0.553	1
RHOB	Del_2q34	0.554	1
EPHA2	Del_11q23.3	0.554	1
FAT1	Amp_4p16.3	0.554	1
HFM1	Del_11q23.3	0.554	1
NCOA1	Del_11q23.3	0.554	1
OGDH	20q-Amp	0.554	1
20p-Amp	Amp_3p25.2	0.554	1
ZFP36L1	RBM26	0.555	1
ZFP36L1	15q-Del	0.555	1
ARID2	15q-Del	0.555	1
DDX3X	Del_9p23	0.555	1
SF3B3	Amp_6p22.3	0.555	1
CNOT1	Amp_6p22.3	0.555	1
Amp_13q22.1	Del_9p21.3	0.555	1
CNNM4	Del_17p12	0.556	1
ERBB2	17q-Amp	0.556	1
HRAS	Amp_19q13.43	0.556	1
MIPOL1	Del_17p12	0.556	1
SF1	Del_17p12	0.556	1
ZFP36L2	Amp_19q13.43	0.556	1
ACTB	Amp_19q13.43	0.556	1
CDK12	Del_2q22.1	0.556	1
NAA15	5p-Amp	0.556	1
CUL1	Amp_19q13.43	0.556	1
GNA13	Amp_19q12	0.556	1
5p-Amp	Del_7q36.3	0.556	1
4p-Del	Amp_8p11.21	0.556	1
4p-Del	Del_2q22.1	0.556	1
C3orf70	DPYS	0.557	1
C3orf70	MARK2	0.557	1
CFHR4	HRAS	0.557	1
CFHR4	RIPK4	0.557	1
CFHR4	CUL1	0.557	1
CNNM4	HSP90AA1	0.557	1
CNNM4	Del_12p13.1	0.557	1
CTNNB1	Del_17p12	0.557	1
GPR50	Del_17p12	0.557	1
GPS2	HSP90AA1	0.557	1
HRAS	DPYS	0.557	1
HRAS	MBD1	0.557	1
HRAS	PPARG	0.557	1
HRAS	Amp_8q22.3	0.557	1
HRAS	Del_Xp11.3	0.557	1
KDM6A	20q-Amp	0.557	1
MIPOL1	Del_12p13.1	0.557	1
PROS1	CUL1	0.557	1
PROS1	3p-Amp	0.557	1
RUNX1	Del_17p12	0.557	1
SF1	ASXL1	0.557	1
ZFP36L2	CTCF	0.557	1
ZFP36L2	PPARG	0.557	1
ZFP36L2	Amp_8q22.3	0.557	1
ZNF511	ASXL1	0.557	1
ZNF511	Del_12p13.1	0.557	1
ACTB	MBD1	0.557	1
ACTB	PPP4R1	0.557	1
ACTB	Del_Xp11.3	0.557	1
CTCF	RIPK4	0.557	1
CTCF	3p-Amp	0.557	1
DENND5B	8p-Del	0.557	1
DPYS	RIPK4	0.557	1
DPYS	ZNF626	0.557	1
FAT1	Amp_19q13.43	0.557	1
HSP90AA1	NKX2-2	0.557	1
IKZF2	Del_17p12	0.557	1
MARK2	SLC9A4	0.557	1
MARK2	ZNF626	0.557	1
MARK2	3p-Amp	0.557	1
MBD1	SLC9A4	0.557	1
MBD1	ZNF626	0.557	1
MBD1	CUL1	0.557	1
MBD1	3p-Amp	0.557	1
PPP4R1	RIPK4	0.557	1
PPP4R1	ZNF626	0.557	1
PPP4R1	CUL1	0.557	1
PPP4R1	3p-Amp	0.557	1
TFG	Del_12p13.1	0.557	1
USP28	ZNF626	0.557	1
ZNF626	Del_Xp11.3	0.557	1
CUL1	Del_Xp11.3	0.557	1
1q-Amp	Del_17p12	0.557	1
3p-Amp	Del_Xp11.3	0.557	1
3q-Amp	9q-Del	0.557	1
7q-Amp	8p-Del	0.557	1
ASXL2	DNAH6	0.558	1
FBXW7	Amp_10p14	0.558	1
HORMAD1	DENND5B	0.558	1
HORMAD1	RBM26	0.558	1
NF2	7q-Amp	0.558	1
NF2	15q-Del	0.558	1
PSIP1	ZBTB7B	0.558	1
PSIP1	Amp_6q21	0.558	1
RHOA	3q-Amp	0.558	1
RHOA	6q-Del	0.558	1
RHOA	Del_15q13.1	0.558	1
SHANK1	3q-Amp	0.558	1
ZBTB7B	15q-Del	0.558	1
DENND5B	PSMC6	0.558	1
DENND5B	ZNF773	0.558	1
DLX6	Del_6p25.3	0.558	1
GLTP	Amp_6p22.3	0.558	1
HSP90AA1	Del_6p25.3	0.558	1
PSMC6	RBM26	0.558	1
RBM26	CNOT3	0.558	1
RBP2	Del_17p12	0.558	1
STK32B	7q-Amp	0.558	1
STK32B	15q-Del	0.558	1
UBA52	Amp_6p22.3	0.558	1
CNOT3	15q-Del	0.558	1
FUT5	Del_6p25.3	0.558	1
FUT5	Del_16q23.1	0.558	1
ZNF185	Amp_13q22.1	0.558	1
ZNF185	Del_6p25.3	0.558	1
ZNF185	Del_16q23.1	0.558	1
ZNF773	7q-Amp	0.558	1
5p-Amp	Del_17p12	0.558	1
7q-Amp	Amp_6q21	0.558	1
Del_12p13.1	Del_16q23.1	0.558	1
ARID1A	17p-Del	0.559	1
ARID1A	Del_5q12.1	0.559	1
ASXL2	ADC	0.559	1
ASXL2	DAZAP1	0.559	1
CDKN1A	CDK12	0.559	1
CDKN1A	4p-Del	0.559	1
CSMD3	RB1	0.559	1
ERBB3	FOXQ1	0.559	1
ERBB3	GPR50	0.559	1
ERBB3	KRAS	0.559	1
ERBB3	RUNX1	0.559	1
ERBB3	DCDC1	0.559	1
ERBB3	ZNF750	0.559	1
ERBB3	BAP1	0.559	1
ERBB3	CDH1	0.559	1
ERBB3	Del_1p36.11	0.559	1
FBXW7	NRAS	0.559	1
FBXW7	GLTP	0.559	1
FBXW7	ZBTB47	0.559	1
FBXW7	UNC93B1	0.559	1
KDM6A	Del_19p13.3	0.559	1
NFE2L2	MYO16	0.559	1
NFE2L2	22q-Del	0.559	1
NRAS	PKHD1	0.559	1
NRAS	ATAD5	0.559	1
PKHD1	GLTP	0.559	1
RXRA	Amp_11q22.2	0.559	1
SF3B1	22q-Del	0.559	1
SF3B1	Amp_11q22.2	0.559	1
AGR3	Amp_17q12	0.559	1
ATAD5	GLTP	0.559	1
ATAD5	UNC93B1	0.559	1
EPHA2	Amp_1q23.3	0.559	1
GLTP	Amp_16p13.2	0.559	1
HFM1	Amp_1q23.3	0.559	1
MYO16	22q-Del	0.559	1
UBA52	Amp_16p13.2	0.559	1
ADC	Amp_17q12	0.559	1
DAZAP1	Amp_17q12	0.559	1
HLA-A	Amp_16p13.2	0.559	1
3q-Amp	Del_4q34.2	0.559	1
5p-Amp	18q-Del	0.559	1
5p-Amp	Del_14q24.1	0.559	1
11q-Del	Del_8p21.3	0.559	1
16p-Del	Amp_11q22.2	0.559	1
8p-Del	Amp_12q15	0.559	1
ARID1A	CSMD3	0.56	1
CSMD3	GPS2	0.56	1
CSMD3	SF1	0.56	1
KLF5	Amp_22q12.2	0.56	1
PROS1	SPTAN1	0.56	1
CTCF	SPTAN1	0.56	1
CTCF	Amp_7p11.2	0.56	1
DPYS	Amp_7p11.2	0.56	1
MBD1	SPTAN1	0.56	1
MBD1	Amp_7p11.2	0.56	1
PPARG	Amp_7p11.2	0.56	1
PPP4R1	SPTAN1	0.56	1
USP28	Amp_7p11.2	0.56	1
ARID1B	Amp_22q12.2	0.56	1
Amp_7p11.2	Del_Xp11.3	0.56	1
CSMD3	Del_9p21.3	0.561	1
FOXQ1	Amp_10p14	0.561	1
GPR50	Amp_10p14	0.561	1
KRAS	Amp_10p14	0.561	1
NFE2L3	Amp_10p14	0.561	1
POTEG	5p-Amp	0.561	1
RUNX1	Amp_10p14	0.561	1
ZNF486	5p-Amp	0.561	1
CASP8	Amp_10p14	0.561	1
TXNIP	Amp_1q21.3	0.561	1
ZNF750	Amp_10p14	0.561	1
EPS8	Amp_10p14	0.561	1
1q-Amp	Amp_10p14	0.561	1
ASXL2	TBC1D12	0.562	1
ASXL2	Del_11q25	0.562	1
BTG2	4p-Del	0.562	1
C12orf43	14q-Del	0.562	1
CDKN2A	HSP90AA1	0.562	1
CDKN2A	Del_12p13.1	0.562	1
CREBBP	15q-Del	0.562	1
CREBBP	Amp_17q12	0.562	1
CSMD3	Del_6p25.3	0.562	1
HIST1H2AG	14q-Del	0.562	1
NHLRC1	4p-Del	0.562	1
PSIP1	Amp_7p21.1	0.562	1
RHOB	Del_5q12.1	0.562	1
TBC1D12	15q-Del	0.562	1
TGIF2LX	14q-Del	0.562	1
CCNE2	14q-Del	0.562	1
CDK12	PHLDA3	0.562	1
DENND5B	Del_6q27	0.562	1
DENND5B	Del_11q25	0.562	1
FAT1	Amp_8p11.21	0.562	1
IL10RB	14q-Del	0.562	1
IL10RB	4p-Del	0.562	1
PHLDA3	14q-Del	0.562	1
PHLDA3	4p-Del	0.562	1
RBM26	Amp_7p21.1	0.562	1
SNRPB	14q-Del	0.562	1
SNRPB	4p-Del	0.562	1
TAF11	14q-Del	0.562	1
TAF11	4p-Del	0.562	1
SCARF2	14q-Del	0.562	1
SCARF2	4p-Del	0.562	1
7q-Amp	Del_6q27	0.562	1
14q-Del	19p-Del	0.562	1
15q-Del	Amp_7p21.1	0.562	1
Amp_7p21.1	Amp_17q12	0.562	1
Amp_8p11.21	Del_11q23.3	0.562	1
Amp_17q12	Del_6q27	0.562	1
C3orf70	Amp_3p25.2	0.563	1
ERCC2	NDC80	0.563	1
ERCC2	Del_7q36.3	0.563	1
HRAS	Amp_3p25.2	0.563	1
IDH1	16p-Del	0.563	1
IDH1	22q-Del	0.563	1
NFE2L2	POTEG	0.563	1
NFE2L2	SARNP	0.563	1
NFE2L2	ZNF486	0.563	1
NFE2L2	OR10Z1	0.563	1
PIGS	RXRA	0.563	1
PIGS	MYO16	0.563	1
PIGS	22q-Del	0.563	1
PIGS	Amp_11q22.2	0.563	1
POTEG	RXRA	0.563	1
POTEG	SF3B1	0.563	1
RXRA	SARNP	0.563	1
RXRA	ZNF486	0.563	1
RXRA	OR10Z1	0.563	1
RXRA	FUS	0.563	1
SARNP	16p-Del	0.563	1
SARNP	Amp_11q22.2	0.563	1
SF3B1	OR10Z1	0.563	1
SF3B1	FUS	0.563	1
ZNF486	16p-Del	0.563	1
ACTB	Amp_3p25.2	0.563	1
DLX6	Del_8p23.3	0.563	1
OR10Z1	16p-Del	0.563	1
UGP2	16p-Del	0.563	1
CUL1	Amp_3p25.2	0.563	1
FUS	22q-Del	0.563	1
SPTAN1	Del_6q27	0.563	1
HIST1H3B	METTL3	0.564	1
HIST1H3B	RHOA	0.564	1
HIST1H3B	SHANK1	0.564	1
METTL3	TMCO4	0.564	1
METTL3	17q-Amp	0.564	1
NF1	HFM1	0.564	1
NF1	KDM5A	0.564	1
RHOA	GNA13	0.564	1
RHOA	Del_1q32.1	0.564	1
RHOA	Del_Xq21.33	0.564	1
SHANK1	17q-Amp	0.564	1
SHANK1	Del_1q32.1	0.564	1
CDKN2A	Amp_17q12	0.565	1
KDM6A	PIGS	0.565	1
KDM6A	RBM26	0.565	1
KDM6A	FUS	0.565	1
NRAS	Amp_20q11.21	0.565	1
PSIP1	Amp_8q22.3	0.565	1
RHOB	Amp_17q12	0.565	1
MYO16	18q-Del	0.565	1
RBM26	Amp_8q22.3	0.565	1
UBA52	Amp_20q11.21	0.565	1
DLX6	Del_22q13.32	0.566	1
ZNF185	Del_22q13.32	0.566	1
CREBBP	HIST1H3B	0.567	1
CREBBP	17q-Amp	0.567	1
CREBBP	Amp_1q23.3	0.567	1
DIAPH2	4p-Del	0.567	1
HIST1H2AG	9p-Del	0.567	1
HIST1H3B	Amp_7p21.1	0.567	1
HIST1H3B	Del_11q25	0.567	1
KDM6A	Del_11p15.5	0.567	1
NHLRC1	9p-Del	0.567	1
RB1	RXRA	0.567	1
RB1	SNRPB	0.567	1
TBC1D12	GNA13	0.567	1
TBC1D12	17q-Amp	0.567	1
TBC1D12	8q-Amp	0.567	1
TBC1D12	Del_18q23	0.567	1
CDK12	TRERF1	0.567	1
RBM10	4p-Del	0.567	1
SF3B3	14q-Del	0.567	1
SF3B3	4p-Del	0.567	1
SNRPB	9p-Del	0.567	1
CNOT1	Amp_20q11.21	0.567	1
FAM47C	14q-Del	0.567	1
FAM47C	Amp_20q11.21	0.567	1
GNA13	Del_11q25	0.567	1
Del_1q32.1	Del_6q27	0.567	1
CDKN1A	RBP2	0.568	1
CDKN1A	DAZAP1	0.568	1
ERBB2	11q-Del	0.568	1
ERBB2	5q-Del	0.568	1
ERBB2	Del_19p13.3	0.568	1
PLCXD3	Del_19p13.3	0.568	1
AGR3	Del_19p13.3	0.568	1
FAT1	Del_13q14.2	0.568	1
KDM5A	Amp_8p11.21	0.568	1
NCOA1	Del_2q22.1	0.568	1
RBP2	11q-Del	0.568	1
RBP2	5q-Del	0.568	1
DAZAP1	5q-Del	0.568	1
DAZAP1	Del_19p13.3	0.568	1
OGDH	Del_2q22.1	0.568	1
11q-Del	Amp_19q12	0.568	1
FGFR3	MIPOL1	0.569	1
FGFR3	ZNF511	0.569	1
FGFR3	NKX2-2	0.569	1
GPS2	STAG2	0.569	1
GPS2	Del_16p13.3	0.569	1
MIPOL1	Amp_8p11.23	0.569	1
MIPOL1	Del_16p13.3	0.569	1
PTTG1IP	Amp_10p14	0.569	1
SF1	Del_16p13.3	0.569	1
STAG2	NKX2-2	0.569	1
NKX2-2	Amp_8p11.23	0.569	1
ZNF773	Del_2q34	0.569	1
Del_9p23	Del_15q13.1	0.569	1
FBXW7	NF1	0.57	1
NF1	GLTP	0.57	1
NF1	ZBTB47	0.57	1
NF1	Amp_16p13.2	0.57	1
PKHD1	Del_22q13.32	0.57	1
DENND5B	9q-Del	0.57	1
20p-Amp	Amp_10p14	0.57	1
18q-Del	Amp_13q22.1	0.57	1
Amp_1p34.2	Amp_5p15.33	0.57	1
Amp_12q15	Del_14q24.1	0.57	1
CDKN2A	Del_11q23.3	0.571	1
FBXW7	KDM6A	0.571	1
FBXW7	Amp_11q13.3	0.571	1
FBXW7	Del_10q23.31	0.571	1
NF1	Amp_6p22.3	0.571	1
PKHD1	Amp_3q26.33	0.571	1
PKHD1	Del_9p21.3	0.571	1
RHOB	Del_11q23.3	0.571	1
ARID2	3q-Amp	0.571	1
ARID2	6q-Del	0.571	1
ARID2	Del_15q13.1	0.571	1
ATAD5	Amp_11q13.3	0.571	1
CDKN2AIPNL	Del_2q34	0.571	1
MED13	Del_9p21.3	0.571	1
NEK11	Amp_6p22.3	0.571	1
DNAH6	Amp_6p22.3	0.571	1
3q-Amp	Amp_1p34.2	0.571	1
10q-Del	Amp_1p34.2	0.571	1
Amp_3q26.33	Amp_16p13.2	0.571	1
Del_8p23.3	Del_9p21.3	0.571	1
ATM	Del_4q34.2	0.572	1
ERBB3	Del_11q23.3	0.572	1
FOXA1	8p-Del	0.572	1
RUNX1	8p-Del	0.572	1
EXOSC10	8p-Del	0.572	1
IKZF2	8p-Del	0.572	1
BAP1	8p-Del	0.572	1
CDH1	8p-Del	0.572	1
EPS8	8p-Del	0.572	1
1q-Amp	8p-Del	0.572	1
CDKN1A	ITGA4	0.573	1
CDKN1A	DNAH6	0.573	1
CFHR4	Amp_12q15	0.573	1
CFHR4	Del_16q23.1	0.573	1
CNNM4	CPD	0.573	1
CNNM4	RBM10	0.573	1
DIAPH2	MIPOL1	0.573	1
DIAPH2	SF1	0.573	1
DIAPH2	ZNF511	0.573	1
DIAPH2	TFG	0.573	1
ERBB2	4p-Del	0.573	1
ERCC2	SPTAN1	0.573	1
GPS2	SF3B3	0.573	1
GPS2	TRERF1	0.573	1
GPS2	CNOT1	0.573	1
GPS2	FAM47C	0.573	1
KLF5	Amp_8q22.3	0.573	1
MIPOL1	RBM10	0.573	1
MIPOL1	SF3B3	0.573	1
MIPOL1	CNOT1	0.573	1
MIPOL1	FAM47C	0.573	1
PROS1	Amp_13q22.1	0.573	1
RXRA	Amp_3q26.33	0.573	1
RXRA	Del_10q23.31	0.573	1
SF1	CPD	0.573	1
SF1	RBM10	0.573	1
SF1	SF3B3	0.573	1
SF1	TRERF1	0.573	1
SF1	CNOT1	0.573	1
SF1	FAM47C	0.573	1
TP53	8q-Amp	0.573	1
TP53	Del_18q23	0.573	1
ZFP36L2	Del_9p21.3	0.573	1
ZNF511	RBM10	0.573	1
ZNF511	TRERF1	0.573	1
CPD	NKX2-2	0.573	1
CTCF	Amp_13q22.1	0.573	1
DLX6	Amp_1q23.3	0.573	1
DPYS	Amp_13q22.1	0.573	1
ITGA4	5q-Del	0.573	1
MARK2	Del_6p25.3	0.573	1
MARK2	Del_16q23.1	0.573	1
MBD1	Amp_12q15	0.573	1
NEK11	Del_19p13.3	0.573	1
NKX2-2	RBM10	0.573	1
NKX2-2	SF3B3	0.573	1
NKX2-2	TRERF1	0.573	1
NKX2-2	FAM47C	0.573	1
PPARG	Amp_12q15	0.573	1
PPARG	Amp_13q22.1	0.573	1
PPARG	Del_16q23.1	0.573	1
PPARGC1A	11q-Del	0.573	1
RIPK4	Del_9p21.3	0.573	1
SLC9A4	Del_9p21.3	0.573	1
TXNIP	5q-Del	0.573	1
TXNIP	Del_19p13.3	0.573	1
USP28	Amp_12q15	0.573	1
ARID1B	Amp_8q22.3	0.573	1
CUL1	Del_9p21.3	0.573	1
DNAH6	5q-Del	0.573	1
3q-Amp	Del_13q14.2	0.573	1
16p-Del	Amp_3q26.33	0.573	1
4p-Del	Amp_19q12	0.573	1
Amp_11q22.2	Del_10q23.31	0.573	1
Amp_13q22.1	Del_Xp11.3	0.573	1
Del_16q23.1	Del_Xp11.3	0.573	1
CDKN1A	Del_4q22.1	0.574	1
CTNNB1	RPTN	0.574	1
CTNNB1	Amp_4q13.3	0.574	1
CTNNB1	Del_7q36.3	0.574	1
ELF3	EP300	0.574	1
EP300	Amp_17q23.3	0.574	1
ERBB3	DLX6	0.574	1
ERBB3	ZNF185	0.574	1
FOXA1	RPTN	0.574	1
FOXA1	ZNF180	0.574	1
FOXA1	DDX3X	0.574	1
FOXA1	NAA15	0.574	1
FOXA1	RARG	0.574	1
FOXA1	19q-Amp	0.574	1
FOXA1	Del_7q36.3	0.574	1
FOXQ1	NDC80	0.574	1
FOXQ1	Amp_4q13.3	0.574	1
GPR50	ZNF180	0.574	1
GPR50	DDX3X	0.574	1
GPR50	NAA15	0.574	1
GPR50	RARG	0.574	1
GPR50	19q-Amp	0.574	1
GPR50	Del_7q36.3	0.574	1
KRAS	RPTN	0.574	1
KRAS	ZNF180	0.574	1
KRAS	DDX3X	0.574	1
KRAS	NAA15	0.574	1
KRAS	RARG	0.574	1
KRAS	Amp_4q13.3	0.574	1
KRAS	Del_7q36.3	0.574	1
NFE2L3	19q-Amp	0.574	1
PTEN	ZNF180	0.574	1
PTEN	NDC80	0.574	1
PTEN	RARG	0.574	1
PTTG1IP	8p-Del	0.574	1
RPTN	RUNX1	0.574	1
RPTN	EXOSC10	0.574	1
RPTN	BAP1	0.574	1
RPTN	Del_1p36.11	0.574	1
RUNX1	NDC80	0.574	1
RUNX1	19q-Amp	0.574	1
RUNX1	Amp_4q13.3	0.574	1
RUNX1	Del_7q36.3	0.574	1
ZNF180	EXOSC10	0.574	1
ZNF180	Del_1p36.11	0.574	1
ACTB	Del_11p15.5	0.574	1
CASP8	NDC80	0.574	1
CASP8	19q-Amp	0.574	1
CASP8	Amp_4q13.3	0.574	1
DCDC1	DDX3X	0.574	1
DCDC1	NAA15	0.574	1
DCDC1	19q-Amp	0.574	1
DCDC1	Del_7q36.3	0.574	1
DDX3X	EXOSC10	0.574	1
DDX3X	IKZF2	0.574	1
DDX3X	THRAP3	0.574	1
DDX3X	WAC	0.574	1
EXOSC10	NDC80	0.574	1
EXOSC10	19q-Amp	0.574	1
EXOSC10	Amp_4q13.3	0.574	1
IKZF2	NDC80	0.574	1
IKZF2	RARG	0.574	1
IKZF2	Amp_4q13.3	0.574	1
IKZF2	Del_7q36.3	0.574	1
NAA15	BAP1	0.574	1
NAA15	CDH1	0.574	1
NDC80	ZNF750	0.574	1
NDC80	BAP1	0.574	1
NDC80	CDH1	0.574	1
NDC80	1q-Amp	0.574	1
NDC80	Del_1p36.11	0.574	1
RARG	ZNF750	0.574	1
RARG	BAP1	0.574	1
RARG	CDH1	0.574	1
RARG	1q-Amp	0.574	1
RARG	Del_1p36.11	0.574	1
RARG	Del_8p23.3	0.574	1
SF3B3	Amp_7p11.2	0.574	1
THRAP3	19q-Amp	0.574	1
THRAP3	Del_7q36.3	0.574	1
TRERF1	SPTAN1	0.574	1
WAC	19q-Amp	0.574	1
WAC	Del_7q36.3	0.574	1
ZNF750	19q-Amp	0.574	1
ZNF750	Del_7q36.3	0.574	1
ASXL1	Del_22q13.32	0.574	1
CDH1	19q-Amp	0.574	1
CDH1	Amp_4q13.3	0.574	1
CDH1	Del_7q36.3	0.574	1
CNOT1	Amp_7p11.2	0.574	1
EPS8	Del_7q36.3	0.574	1
19q-Amp	1q-Amp	0.574	1
19q-Amp	Del_1p36.11	0.574	1
1q-Amp	Del_7q36.3	0.574	1
9q-Del	Amp_8p11.21	0.574	1
Amp_4q13.3	Del_1p36.11	0.574	1
C12orf43	Del_8p21.3	0.575	1
CDKN2A	PHLDA3	0.575	1
CDKN2A	SNRPB	0.575	1
CDKN2A	TAF11	0.575	1
CDKN2A	19p-Del	0.575	1
HIST1H2AG	RHOB	0.575	1
METTL3	PKHD1	0.575	1
NF2	EPHA2	0.575	1
NF2	OGDH	0.575	1
NF2	Amp_4p16.3	0.575	1
NHLRC1	RHOB	0.575	1
NHLRC1	Del_8p21.3	0.575	1
PIK3CA	ZNF180	0.575	1
PIK3CA	DDX3X	0.575	1
PIK3CA	Del_7q36.3	0.575	1
RHOB	IL10RB	0.575	1
RHOB	PHLDA3	0.575	1
SHANK1	Amp_16p13.2	0.575	1
ZBTB7B	HFM1	0.575	1
ZBTB7B	KDM5A	0.575	1
ZBTB7B	Amp_4p16.3	0.575	1
CCNE2	Del_8p21.3	0.575	1
EPHA2	STK32B	0.575	1
EPHA2	ZNF773	0.575	1
HFM1	CNOT3	0.575	1
HFM1	Amp_6q21	0.575	1
KDM5A	PSMC6	0.575	1
KDM5A	STK32B	0.575	1
KDM5A	ZNF773	0.575	1
KDM5A	Amp_6q21	0.575	1
NCOA1	Amp_6q21	0.575	1
PSMC6	Amp_4p16.3	0.575	1
STK32B	OGDH	0.575	1
CNOT3	Amp_4p16.3	0.575	1
OGDH	Amp_6q21	0.575	1
ZNF773	Amp_4p16.3	0.575	1
Amp_4p16.3	Amp_6q21	0.575	1
CDKN1A	Amp_20q11.21	0.576	1
ELF3	15q-Del	0.576	1
STAG2	20q-Amp	0.576	1
FAT1	Amp_8p11.23	0.576	1
RBM26	Del_3p14.2	0.576	1
C3orf70	Amp_3q26.33	0.577	1
CDKN2A	Del_13q14.2	0.577	1
CFHR4	TXNIP	0.577	1
CFHR4	DNAH6	0.577	1
GTF2I	PROS1	0.577	1
GTF2I	CTCF	0.577	1
GTF2I	DPYS	0.577	1
GTF2I	PPARG	0.577	1
GTF2I	USP28	0.577	1
IDH1	7p-Amp	0.577	1
IDH1	4q-Del	0.577	1
KDM6A	20p-Amp	0.577	1
KLF5	ZNF486	0.577	1
NF1	Del_6p25.3	0.577	1
PIGS	PARD3	0.577	1
PIGS	4q-Del	0.577	1
POTEG	7p-Amp	0.577	1
RHOB	Del_13q14.2	0.577	1
SARNP	4q-Del	0.577	1
ZFP36L2	Del_10q23.31	0.577	1
ZNF486	ARID1B	0.577	1
ZNF486	4q-Del	0.577	1
CTCF	DNAH6	0.577	1
DPYS	TXNIP	0.577	1
DPYS	DNAH6	0.577	1
ITGA4	MARK2	0.577	1
ITGA4	MBD1	0.577	1
ITGA4	PPARG	0.577	1
ITGA4	USP28	0.577	1
MARK2	NEK11	0.577	1
MARK2	PPARGC1A	0.577	1
MARK2	SSH3	0.577	1
MARK2	TXNIP	0.577	1
MARK2	DNAH6	0.577	1
MBD1	NEK11	0.577	1
MBD1	SSH3	0.577	1
MBD1	TXNIP	0.577	1
MBD1	DNAH6	0.577	1
NDC80	Del_4q22.1	0.577	1
NEK11	PPARG	0.577	1
NEK11	PPP4R1	0.577	1
NEK11	USP28	0.577	1
NEK11	Del_Xp11.3	0.577	1
OR10Z1	PARD3	0.577	1
OR10Z1	ARID1B	0.577	1
PPARG	SSH3	0.577	1
PPARG	DNAH6	0.577	1
PPARGC1A	PPP4R1	0.577	1
RIPK4	Amp_3q26.33	0.577	1
SLC9A4	Del_10q23.31	0.577	1
SSH3	Del_Xp11.3	0.577	1
TXNIP	USP28	0.577	1
TXNIP	Del_Xp11.3	0.577	1
UGP2	ARID1B	0.577	1
UGP2	7p-Amp	0.577	1
USP28	DNAH6	0.577	1
ZNF626	Amp_3q26.33	0.577	1
ARID1B	FUS	0.577	1
DNAH6	Del_Xp11.3	0.577	1
FUS	7p-Amp	0.577	1
19q-Amp	Del_4q22.1	0.577	1
3p-Amp	Del_10q23.31	0.577	1
ARID1A	CNOT1	0.578	1
DIAPH2	Amp_5p15.33	0.578	1
STAG2	ARID1B	0.578	1
CDKN2AIPNL	FAT1	0.578	1
CDKN2AIPNL	20q-Amp	0.578	1
CDKN2AIPNL	Del_11q23.3	0.578	1
PARD3	Amp_8p11.23	0.578	1
RBP2	Amp_19q13.43	0.578	1
SF3B3	Amp_5p15.33	0.578	1
ADC	Amp_19q13.43	0.578	1
ARID1B	Amp_8p11.23	0.578	1
CNOT1	Amp_5p15.33	0.578	1
DAZAP1	Amp_19q13.43	0.578	1
4q-Del	Amp_8p11.23	0.578	1
9q-Del	Amp_12q15	0.578	1
ELF3	17q-Amp	0.579	1
ELF3	Del_1q32.1	0.579	1
ELF3	Del_Xq21.33	0.579	1
EP300	ZNF180	0.579	1
EP300	ZNF486	0.579	1
EP300	FUS	0.579	1
EP300	Amp_4q13.3	0.579	1
IDH1	11p-Del	0.579	1
IDH1	17p-Del	0.579	1
POTEG	11p-Del	0.579	1
RPTN	11p-Del	0.579	1
ZNF180	11p-Del	0.579	1
ZNF486	17p-Del	0.579	1
FUS	11p-Del	0.579	1
FUS	17p-Del	0.579	1
GNA13	Amp_17q23.3	0.579	1
TMCO4	Del_3p14.2	0.579	1
11p-Del	Del_7q36.3	0.579	1
ASXL2	Amp_10p14	0.58	1
ERBB2	Del_8p21.3	0.58	1
HORMAD1	20q-Amp	0.58	1
KPTN	9q-Del	0.58	1
PTTG1IP	9q-Del	0.58	1
PTTG1IP	Del_5q12.1	0.58	1
FAT1	ZNF773	0.58	1
FAT1	Del_17p12	0.58	1
PSMC6	20q-Amp	0.58	1
STK32B	20q-Amp	0.58	1
CNOT3	20q-Amp	0.58	1
CNOT3	Del_11q23.3	0.58	1
ZNF773	20q-Amp	0.58	1
8p-Del	Del_9p21.3	0.58	1
CSMD3	SSH3	0.581	1
CSMD3	DNAH6	0.581	1
ERBB2	8p-Del	0.581	1
ERCC2	TP53	0.581	1
KLF5	RXRA	0.581	1
KLF5	Amp_11q22.2	0.581	1
NFE2L2	PARD3	0.581	1
NFE2L2	ARID1B	0.581	1
NFE2L2	7p-Amp	0.581	1
NRAS	ZFP36L1	0.581	1
NRAS	ARID2	0.581	1
RXRA	PARD3	0.581	1
RXRA	7p-Amp	0.581	1
SF1	Del_9p21.3	0.581	1
SF3B1	7p-Amp	0.581	1
ZFP36L1	GLTP	0.581	1
ZFP36L1	ZBTB47	0.581	1
ZFP36L1	HLA-A	0.581	1
ZFP36L1	UNC93B1	0.581	1
GLTP	Amp_1p34.2	0.581	1
MYO16	ARID1B	0.581	1
PARD3	16p-Del	0.581	1
PARD3	22q-Del	0.581	1
TFG	Del_9p21.3	0.581	1
UBA52	Amp_1p34.2	0.581	1
ARID1B	Amp_11q22.2	0.581	1
7p-Amp	22q-Del	0.581	1
4q-Del	Amp_11q22.2	0.581	1
8p-Del	Amp_3p25.2	0.581	1
ASXL2	ELF3	0.582	1
CTNNB1	Del_5q12.1	0.582	1
EP300	CNOT1	0.582	1
EP300	FAM47C	0.582	1
ERBB2	HFM1	0.582	1
ERBB2	Amp_4p16.3	0.582	1
FOXQ1	9q-Del	0.582	1
GPR50	9q-Del	0.582	1
GPR50	Del_5q12.1	0.582	1
GTF2I	Amp_20q11.21	0.582	1
PTEN	9q-Del	0.582	1
RB1	PPP4R1	0.582	1
STAG2	Amp_3p25.2	0.582	1
ARID2	HFM1	0.582	1
ARID2	KDM5A	0.582	1
ARID2	9p-Del	0.582	1
CPD	17p-Del	0.582	1
CTCF	9p-Del	0.582	1
DPYS	9p-Del	0.582	1
EPHA2	Amp_1p34.2	0.582	1
HFM1	Amp_1p34.2	0.582	1
MARK2	9p-Del	0.582	1
RBM10	17p-Del	0.582	1
THRAP3	9q-Del	0.582	1
USP28	9p-Del	0.582	1
ZNF750	Del_5q12.1	0.582	1
CDH1	9q-Del	0.582	1
CNOT1	11p-Del	0.582	1
CNOT1	17p-Del	0.582	1
DNAH6	Amp_20q11.21	0.582	1
EPS8	Del_5q12.1	0.582	1
FAM47C	17p-Del	0.582	1
OGDH	Amp_19q12	0.582	1
1q-Amp	Del_5q12.1	0.582	1
C3orf70	HIST1H3B	0.583	1
C3orf70	17q-Amp	0.583	1
ERCC2	SF3B1	0.583	1
ERCC2	16p-Del	0.583	1
HIST1H3B	HRAS	0.583	1
HIST1H3B	RIPK4	0.583	1
HIST1H3B	SLC9A4	0.583	1
HIST1H3B	3p-Amp	0.583	1
HRAS	GNA13	0.583	1
HRAS	TMCO4	0.583	1
HRAS	Del_1q32.1	0.583	1
HRAS	Del_Xq21.33	0.583	1
ACTB	TMCO4	0.583	1
ACTB	17q-Amp	0.583	1
ACTB	Del_1q32.1	0.583	1
HSP90AA1	Amp_22q12.2	0.583	1
RIPK4	Del_Xq21.33	0.583	1
SLC9A4	17q-Amp	0.583	1
SLC9A4	Del_1q32.1	0.583	1
SLC9A4	Del_Xq21.33	0.583	1
ASXL1	Amp_22q12.2	0.583	1
CUL1	GNA13	0.583	1
CUL1	TMCO4	0.583	1
CUL1	Del_Xq21.33	0.583	1
GNA13	3p-Amp	0.583	1
TMCO4	3p-Amp	0.583	1
17q-Amp	3p-Amp	0.583	1
ARID1A	HRAS	0.584	1
ARID1A	ACTB	0.584	1
ARID1A	RIPK4	0.584	1
ARID1A	3p-Amp	0.584	1
CDKN1A	CDKN2A	0.584	1
CDKN2A	11q-Del	0.584	1
CDKN2A	Del_19p13.3	0.584	1
RHOB	5q-Del	0.584	1
CFHR4	Del_22q13.32	0.585	1
COPZ2	Del_13q14.2	0.585	1
CTNNB1	Del_14q24.1	0.585	1
ELF3	SPTAN1	0.585	1
FOXA1	18q-Del	0.585	1
FOXQ1	Del_14q24.1	0.585	1
KDM6A	CDK12	0.585	1
KLF5	Del_9p23	0.585	1
NFE2L3	18q-Del	0.585	1
PROS1	20p-Amp	0.585	1
PTEN	Del_14q24.1	0.585	1
PTTG1IP	Del_13q14.2	0.585	1
RUNX1	Del_14q24.1	0.585	1
CDKN2AIPNL	Del_2q22.1	0.585	1
CTCF	Del_22q13.32	0.585	1
DPYS	20p-Amp	0.585	1
IKZF2	18q-Del	0.585	1
MARK2	20p-Amp	0.585	1
PPP4R1	Del_22q13.32	0.585	1
THRAP3	18q-Del	0.585	1
ZNF750	18q-Del	0.585	1
ZNF750	Del_14q24.1	0.585	1
CDH1	18q-Del	0.585	1
20p-Amp	Del_Xp11.3	0.585	1
Amp_7p11.2	Del_3p14.2	0.585	1
Amp_8p11.21	Del_2q22.1	0.585	1
CDKN2A	CPD	0.586	1
CDKN2A	RBM10	0.586	1
CDKN2A	TRERF1	0.586	1
DIAPH2	RHOB	0.586	1
EP300	14q-Del	0.586	1
EP300	4p-Del	0.586	1
ERBB2	Del_11q23.3	0.586	1
RB1	Amp_8p11.23	0.586	1
RHOB	CPD	0.586	1
RHOB	CNOT1	0.586	1
RHOB	FAM47C	0.586	1
UBA52	Amp_3p25.2	0.586	1
ZBTB47	Amp_3p25.2	0.586	1
ASXL1	Amp_1q23.3	0.586	1
HLA-A	Amp_3p25.2	0.586	1
Amp_1p34.2	Amp_7p11.2	0.586	1
Amp_8q22.3	Del_2q34	0.586	1
CDKN2A	Del_2q22.1	0.587	1
CREBBP	Del_2q34	0.587	1
HIST1H2AG	Amp_22q12.2	0.587	1
NF2	Amp_1q21.3	0.587	1
NHLRC1	Amp_22q12.2	0.587	1
PIK3CA	20q-Amp	0.587	1
RHOB	Del_2q22.1	0.587	1
TBC1D12	Amp_12q15	0.587	1
ARID2	Amp_8q22.3	0.587	1
CCNE2	Amp_22q12.2	0.587	1
HFM1	Amp_10p14	0.587	1
PHLDA3	Amp_22q12.2	0.587	1
SNRPB	Amp_22q12.2	0.587	1
TAF11	Amp_22q12.2	0.587	1
Amp_12q15	Del_6q27	0.587	1
ATM	RXRA	0.588	1
C3orf70	3q-Amp	0.588	1
C3orf70	6q-Del	0.588	1
C3orf70	Del_15q13.1	0.588	1
CDKN1A	CREBBP	0.588	1
CDKN1A	Del_6q27	0.588	1
DIAPH2	Del_8p21.3	0.588	1
PIGS	8q-Amp	0.588	1
POTEG	8q-Amp	0.588	1
POTEG	Del_18q23	0.588	1
SARNP	Del_18q23	0.588	1
TBC1D12	5q-Del	0.588	1
TSC1	AGR3	0.588	1
TSC1	RBP2	0.588	1
TSC1	ADC	0.588	1
TSC1	DAZAP1	0.588	1
ZFP36L2	3q-Amp	0.588	1
ZFP36L2	10q-Del	0.588	1
ACTB	10q-Del	0.588	1
RIPK4	3q-Amp	0.588	1
RIPK4	10q-Del	0.588	1
RIPK4	Del_15q13.1	0.588	1
TXNIP	Amp_19q13.43	0.588	1
ZNF626	3q-Amp	0.588	1
ZNF626	6q-Del	0.588	1
ZNF626	Del_15q13.1	0.588	1
CUL1	6q-Del	0.588	1
FUS	8q-Amp	0.588	1
3p-Amp	10q-Del	0.588	1
3p-Amp	Del_15q13.1	0.588	1
Amp_7p21.1	Del_19p13.3	0.588	1
ATM	Amp_6p22.3	0.589	1
ATM	Amp_16p13.2	0.589	1
CNNM4	DENND5B	0.589	1
CNNM4	RBM26	0.589	1
CNNM4	15q-Del	0.589	1
CNNM4	Amp_3q26.33	0.589	1
CNNM4	Amp_11q13.3	0.589	1
CREBBP	Amp_10p14	0.589	1
CSMD3	Amp_1q21.3	0.589	1
CSMD3	Amp_1q23.3	0.589	1
ERBB2	Del_22q13.32	0.589	1
FBXW7	Del_4q34.2	0.589	1
GPS2	15q-Del	0.589	1
GPS2	Amp_3q26.33	0.589	1
GPS2	Amp_11q13.3	0.589	1
MIPOL1	7q-Amp	0.589	1
MIPOL1	Amp_3q26.33	0.589	1
MIPOL1	Del_10q23.31	0.589	1
PSIP1	SF1	0.589	1
PSIP1	ZNF511	0.589	1
SF1	DENND5B	0.589	1
SF1	7q-Amp	0.589	1
SF1	Del_10q23.31	0.589	1
ZNF511	DENND5B	0.589	1
ZNF511	15q-Del	0.589	1
ZNF511	Amp_3q26.33	0.589	1
ZNF511	Amp_11q13.3	0.589	1
CPD	Del_16q23.1	0.589	1
DENND5B	NKX2-2	0.589	1
DENND5B	TFG	0.589	1
NKX2-2	RBM26	0.589	1
NKX2-2	15q-Del	0.589	1
NKX2-2	Amp_11q13.3	0.589	1
NKX2-2	Del_10q23.31	0.589	1
RBM10	Amp_13q22.1	0.589	1
SF3B3	Amp_12q15	0.589	1
TFG	Amp_3q26.33	0.589	1
TRERF1	Amp_13q22.1	0.589	1
CNOT1	Amp_12q15	0.589	1
CNOT1	Del_16q23.1	0.589	1
FAM47C	Amp_12q15	0.589	1
FAM47C	Amp_13q22.1	0.589	1
ARID1A	Del_13q14.2	0.59	1
ATM	ACTB	0.59	1
COPZ2	5p-Amp	0.59	1
CREBBP	14q-Del	0.59	1
CREBBP	4p-Del	0.59	1
KPTN	5p-Amp	0.59	1
PTTG1IP	5p-Amp	0.59	1
CDK12	Amp_7p21.1	0.59	1
DDX3X	8q-Amp	0.59	1
DENND5B	Amp_1q21.3	0.59	1
DLX6	18q-Del	0.59	1
DLX6	Del_14q24.1	0.59	1
NAA15	8q-Amp	0.59	1
NAA15	Del_18q23	0.59	1
RARG	8q-Amp	0.59	1
FUT5	18q-Del	0.59	1
ZNF185	18q-Del	0.59	1
ZNF185	Del_14q24.1	0.59	1
3p-Amp	Del_4q34.2	0.59	1
ASXL2	RPTN	0.591	1
ASXL2	ZNF180	0.591	1
ASXL2	NAA15	0.591	1
ASXL2	Amp_4q13.3	0.591	1
CDKN2A	5p-Amp	0.591	1
HORMAD1	Amp_8p11.21	0.591	1
HORMAD1	Del_2q22.1	0.591	1
IDH1	Del_12p13.1	0.591	1
NHLRC1	Amp_10p14	0.591	1
POTEG	HSP90AA1	0.591	1
POTEG	Del_12p13.1	0.591	1
RHOB	5p-Amp	0.591	1
SARNP	Del_12p13.1	0.591	1
SHANK1	20q-Amp	0.591	1
ZBTB7B	Del_2q22.1	0.591	1
ZNF180	Amp_17q12	0.591	1
ZNF486	Del_12p13.1	0.591	1
CCNE2	Amp_10p14	0.591	1
IL10RB	Amp_10p14	0.591	1
LETMD1	Amp_10p14	0.591	1
OR10Z1	Del_12p13.1	0.591	1
PSMC6	Amp_8p11.21	0.591	1
PSMC6	Del_2q22.1	0.591	1
UGP2	Del_12p13.1	0.591	1
CNOT3	Amp_8p11.21	0.591	1
SCARF2	Amp_10p14	0.591	1
19q-Amp	Amp_17q12	0.591	1
Amp_1q21.3	Amp_13q22.1	0.591	1
Amp_17q12	Del_7q36.3	0.591	1
ERBB2	CDKN2AIPNL	0.592	1
FBXW7	ZFP36L1	0.592	1
HORMAD1	RHOA	0.592	1
NF2	SHANK1	0.592	1
RHOA	ZBTB7B	0.592	1
RHOA	PSMC6	0.592	1
RHOA	STK32B	0.592	1
RHOA	ZNF773	0.592	1
RHOA	Amp_6q21	0.592	1
SHANK1	ZBTB7B	0.592	1
SHANK1	ZNF773	0.592	1
SHANK1	Amp_6q21	0.592	1
ZFP36L1	Amp_16p13.2	0.592	1
ARID2	ATAD5	0.592	1
ATAD5	Amp_1p34.2	0.592	1
CDK12	DENND5B	0.592	1
CDK12	7q-Amp	0.592	1
DENND5B	4p-Del	0.592	1
NDC80	Amp_1q23.3	0.592	1
RBM26	14q-Del	0.592	1
19q-Amp	Amp_1q23.3	0.592	1
ARID1A	MARK2	0.593	1
CFHR4	Amp_5p15.33	0.593	1
ERBB3	Amp_8p11.21	0.593	1
FGFR3	PPARGC1A	0.593	1
FGFR3	TXNIP	0.593	1
GPR50	Del_13q14.2	0.593	1
GTF2I	STAG2	0.593	1
KDM6A	Del_2q22.1	0.593	1
PIK3CA	EPHA2	0.593	1
PIK3CA	HFM1	0.593	1
PIK3CA	KDM5A	0.593	1
PTEN	Del_13q14.2	0.593	1
TP53	22q-Del	0.593	1
CASP8	Del_13q14.2	0.593	1
CTCF	Amp_5p15.33	0.593	1
GLTP	Del_11p15.5	0.593	1
PPARGC1A	Amp_8p11.23	0.593	1
SSH3	Del_16p13.3	0.593	1
TXNIP	Amp_8p11.23	0.593	1
USP28	Amp_5p15.33	0.593	1
ZBTB47	Del_11p15.5	0.593	1
EPS8	Del_13q14.2	0.593	1
UNC93B1	Del_11p15.5	0.593	1
10q-Del	Amp_8q22.3	0.593	1
Del_1p36.11	Del_13q14.2	0.593	1
KLF5	Del_14q24.1	0.594	1
PARD3	Del_14q24.1	0.594	1
ARID1B	Del_14q24.1	0.594	1
NF2	Amp_6p22.3	0.595	1
ZBTB7B	Amp_6p22.3	0.595	1
DENND5B	5p-Amp	0.595	1
LETMD1	Del_8p23.3	0.595	1
RBM10	Del_18q23	0.595	1
TRERF1	8q-Amp	0.595	1
ADC	Del_9p23	0.595	1
SCARF2	Del_8p23.3	0.595	1
CREBBP	NCOA1	0.596	1
CTNNB1	FOXQ1	0.596	1
CTNNB1	GPR50	0.596	1
CTNNB1	NFE2L3	0.596	1
CTNNB1	CASP8	0.596	1
CTNNB1	DCDC1	0.596	1
CTNNB1	WAC	0.596	1
CTNNB1	CDH1	0.596	1
CTNNB1	Del_1p36.11	0.596	1
FOXA1	FOXQ1	0.596	1
FOXA1	GPR50	0.596	1
FOXA1	KRAS	0.596	1
FOXA1	RUNX1	0.596	1
FOXA1	CASP8	0.596	1
FOXA1	DCDC1	0.596	1
FOXA1	EXOSC10	0.596	1
FOXA1	IKZF2	0.596	1
FOXA1	WAC	0.596	1
FOXA1	CDH1	0.596	1
FOXA1	Del_1p36.11	0.596	1
FOXQ1	PTEN	0.596	1
FOXQ1	RUNX1	0.596	1
FOXQ1	EXOSC10	0.596	1
FOXQ1	IKZF2	0.596	1
FOXQ1	WAC	0.596	1
FOXQ1	ZNF750	0.596	1
FOXQ1	CDH1	0.596	1
FOXQ1	EPS8	0.596	1
FOXQ1	Del_1p36.11	0.596	1
GPR50	NFE2L3	0.596	1
GPR50	PTEN	0.596	1
GPR50	EXOSC10	0.596	1
GPR50	IKZF2	0.596	1
GPR50	BAP1	0.596	1
GPR50	1q-Amp	0.596	1
GPR50	Del_1p36.11	0.596	1
KRAS	NFE2L3	0.596	1
KRAS	DCDC1	0.596	1
KRAS	EXOSC10	0.596	1
KRAS	IKZF2	0.596	1
KRAS	THRAP3	0.596	1
KRAS	WAC	0.596	1
KRAS	ZNF750	0.596	1
KRAS	BAP1	0.596	1
KRAS	EPS8	0.596	1
KRAS	Del_1p36.11	0.596	1
NF1	20p-Amp	0.596	1
NFE2L3	EXOSC10	0.596	1
NFE2L3	BAP1	0.596	1
PTEN	RUNX1	0.596	1
PTEN	DCDC1	0.596	1
PTEN	IKZF2	0.596	1
PTEN	THRAP3	0.596	1
PTEN	WAC	0.596	1
PTEN	BAP1	0.596	1
PTEN	1q-Amp	0.596	1
RUNX1	DCDC1	0.596	1
RUNX1	EXOSC10	0.596	1
RUNX1	THRAP3	0.596	1
RUNX1	WAC	0.596	1
RUNX1	CDH1	0.596	1
RUNX1	EPS8	0.596	1
RUNX1	Del_1p36.11	0.596	1
ZFP36L1	Amp_1q21.3	0.596	1
CASP8	DCDC1	0.596	1
CASP8	THRAP3	0.596	1
CASP8	WAC	0.596	1
CASP8	1q-Amp	0.596	1
CASP8	Del_1p36.11	0.596	1
DCDC1	EXOSC10	0.596	1
DCDC1	EPS8	0.596	1
DCDC1	1q-Amp	0.596	1
DCDC1	Del_1p36.11	0.596	1
EPHA2	Del_6q27	0.596	1
EXOSC10	ZNF750	0.596	1
EXOSC10	CDH1	0.596	1
EXOSC10	1q-Amp	0.596	1
IKZF2	CDH1	0.596	1
IKZF2	1q-Amp	0.596	1
IKZF2	Del_1p36.11	0.596	1
KDM5A	Del_6q27	0.596	1
THRAP3	ZNF750	0.596	1
THRAP3	BAP1	0.596	1
THRAP3	CDH1	0.596	1
WAC	CDH1	0.596	1
WAC	Del_1p36.11	0.596	1
ZNF750	EPS8	0.596	1
ZNF750	1q-Amp	0.596	1
BAP1	CDH1	0.596	1
BAP1	EPS8	0.596	1
BAP1	Del_1p36.11	0.596	1
CDH1	EPS8	0.596	1
CDH1	1q-Amp	0.596	1
EPS8	Del_1p36.11	0.596	1
OGDH	Amp_7p21.1	0.596	1
1q-Amp	Del_1p36.11	0.596	1
5q-Del	Amp_17q12	0.596	1
CFHR4	RPTN	0.597	1
CFHR4	ZNF180	0.597	1
CFHR4	DDX3X	0.597	1
CFHR4	NAA15	0.597	1
CFHR4	19q-Amp	0.597	1
ERBB3	MARK2	0.597	1
NF2	Del_8p21.3	0.597	1
PROS1	NDC80	0.597	1
PROS1	19q-Amp	0.597	1
RPTN	CTCF	0.597	1
RPTN	DPYS	0.597	1
RPTN	PPARG	0.597	1
RPTN	Del_Xp11.3	0.597	1
ZNF180	DPYS	0.597	1
ZNF180	MARK2	0.597	1
ZNF180	Del_Xp11.3	0.597	1
CTCF	DDX3X	0.597	1
CTCF	NAA15	0.597	1
CTCF	NDC80	0.597	1
CTCF	19q-Amp	0.597	1
DDX3X	DPYS	0.597	1
DDX3X	MARK2	0.597	1
DDX3X	PPP4R1	0.597	1
DDX3X	USP28	0.597	1
DPYS	RARG	0.597	1
DPYS	19q-Amp	0.597	1
DPYS	Del_7q36.3	0.597	1
MARK2	NDC80	0.597	1
MARK2	19q-Amp	0.597	1
MBD1	NAA15	0.597	1
MBD1	NDC80	0.597	1
MBD1	19q-Amp	0.597	1
NAA15	USP28	0.597	1
NAA15	Del_Xp11.3	0.597	1
NDC80	PPARG	0.597	1
NDC80	PPP4R1	0.597	1
NDC80	Del_Xp11.3	0.597	1
PPARG	19q-Amp	0.597	1
PPP4R1	RARG	0.597	1
PPP4R1	19q-Amp	0.597	1
PPP4R1	Amp_4q13.3	0.597	1
PPP4R1	Del_7q36.3	0.597	1
RARG	Del_Xp11.3	0.597	1
USP28	19q-Amp	0.597	1
USP28	Amp_4q13.3	0.597	1
USP28	Del_7q36.3	0.597	1
ZNF773	Del_8p21.3	0.597	1
Amp_6q21	Del_8p21.3	0.597	1
Amp_7p11.2	Del_4q22.1	0.597	1
Amp_13q22.1	Del_13q14.2	0.597	1
Amp_19q13.43	Del_4q22.1	0.597	1
Del_7q36.3	Del_Xp11.3	0.597	1
PLCXD3	3q-Amp	0.598	1
PLCXD3	6q-Del	0.598	1
AGR3	3q-Amp	0.598	1
AGR3	10q-Del	0.598	1
AGR3	6q-Del	0.598	1
AGR3	Del_15q13.1	0.598	1
RBP2	3q-Amp	0.598	1
RBP2	10q-Del	0.598	1
RBP2	6q-Del	0.598	1
ADC	3q-Amp	0.598	1
ADC	10q-Del	0.598	1
ADC	6q-Del	0.598	1
DAZAP1	10q-Del	0.598	1
ATM	GPS2	0.599	1
ATM	SF1	0.599	1
BTG2	8p-Del	0.599	1
CNNM4	Del_4q34.2	0.599	1
CREBBP	CDKN2AIPNL	0.599	1
CSMD3	Del_12p13.1	0.599	1
ERCC2	DLX6	0.599	1
ERCC2	EXOSC10	0.599	1
ERCC2	CDH1	0.599	1
ERCC2	1q-Amp	0.599	1
GPS2	Del_4q34.2	0.599	1
HIST1H2AG	8p-Del	0.599	1
MIPOL1	Del_4q34.2	0.599	1
SF1	Del_4q34.2	0.599	1
STAG2	ZFP36L1	0.599	1
STAG2	Amp_1p34.2	0.599	1
TBC1D12	CDKN2AIPNL	0.599	1
CCNE2	8p-Del	0.599	1
CDKN2AIPNL	Del_6q27	0.599	1
CDKN2AIPNL	Del_11q25	0.599	1
HFM1	8p-Del	0.599	1
LETMD1	8p-Del	0.599	1
SNRPB	8p-Del	0.599	1
TAF11	8p-Del	0.599	1
SCARF2	8p-Del	0.599	1
8p-Del	Amp_4p16.3	0.599	1
Amp_8q22.3	Del_19p13.3	0.599	1
BTG2	NFE2L2	0.6	1
BTG2	MYO16	0.6	1
BTG2	Amp_11q22.2	0.6	1
C12orf43	NFE2L2	0.6	1
C12orf43	22q-Del	0.6	1
C12orf43	Amp_11q22.2	0.6	1
CDKN1A	Del_8p23.3	0.6	1
CSMD3	5q-Del	0.6	1
ERCC2	TSC1	0.6	1
HIST1H2AG	RXRA	0.6	1
HIST1H2AG	SF3B1	0.6	1
HIST1H2AG	Amp_11q22.2	0.6	1
NFE2L2	NHLRC1	0.6	1
NFE2L2	TGIF2LX	0.6	1
NFE2L2	CCNE2	0.6	1
NFE2L2	IL10RB	0.6	1
NFE2L2	PHLDA3	0.6	1
NFE2L2	TAF11	0.6	1
NHLRC1	RXRA	0.6	1
NHLRC1	SF3B1	0.6	1
NHLRC1	16p-Del	0.6	1
NHLRC1	22q-Del	0.6	1
NHLRC1	Amp_11q22.2	0.6	1
RXRA	TGIF2LX	0.6	1
RXRA	CCNE2	0.6	1
RXRA	IL10RB	0.6	1
RXRA	PHLDA3	0.6	1
RXRA	SNRPB	0.6	1
RXRA	19p-Del	0.6	1
SF3B1	TGIF2LX	0.6	1
SF3B1	LETMD1	0.6	1
SF3B1	SNRPB	0.6	1
TGIF2LX	22q-Del	0.6	1
TGIF2LX	Amp_11q22.2	0.6	1
TP53	DENND5B	0.6	1
CCNE2	16p-Del	0.6	1
CCNE2	22q-Del	0.6	1
CCNE2	Amp_11q22.2	0.6	1
IL10RB	16p-Del	0.6	1
IL10RB	22q-Del	0.6	1
IL10RB	Amp_11q22.2	0.6	1
LETMD1	22q-Del	0.6	1
LETMD1	Amp_11q22.2	0.6	1
MYO16	SNRPB	0.6	1
MYO16	SCARF2	0.6	1
PHLDA3	16p-Del	0.6	1
PHLDA3	Amp_11q22.2	0.6	1
SNRPB	16p-Del	0.6	1
SNRPB	22q-Del	0.6	1
TAF11	16p-Del	0.6	1
TAF11	22q-Del	0.6	1
SCARF2	22q-Del	0.6	1
SCARF2	Amp_11q22.2	0.6	1
COPZ2	EP300	0.601	1
COPZ2	11p-Del	0.601	1
COPZ2	17p-Del	0.601	1
EP300	PTTG1IP	0.601	1
ERBB2	ZBTB7B	0.601	1
ERBB2	STK32B	0.601	1
ERBB2	Amp_6q21	0.601	1
KDM6A	4q-Del	0.601	1
KPTN	17p-Del	0.601	1
NF1	Amp_3q26.33	0.601	1
NF1	Del_10q23.31	0.601	1
PTTG1IP	11p-Del	0.601	1
RB1	20q-Amp	0.601	1
PSMC6	Amp_19q12	0.601	1
STK32B	Amp_19q12	0.601	1
CNOT3	Amp_19q12	0.601	1
ZNF773	Amp_19q12	0.601	1
Amp_8p11.23	Del_2q22.1	0.601	1
Amp_19q12	Del_5q12.1	0.601	1
GTF2I	17q-Amp	0.602	1
GTF2I	Del_1q32.1	0.602	1
HIST1H3B	PPARGC1A	0.602	1
HIST1H3B	SSH3	0.602	1
HIST1H3B	TXNIP	0.602	1
HIST1H3B	DNAH6	0.602	1
FAT1	Amp_22q12.2	0.602	1
ITGA4	GNA13	0.602	1
ITGA4	17q-Amp	0.602	1
ITGA4	Del_1q32.1	0.602	1
NEK11	GNA13	0.602	1
NEK11	17q-Amp	0.602	1
NEK11	Del_1q32.1	0.602	1
SSH3	GNA13	0.602	1
SSH3	Del_Xq21.33	0.602	1
TXNIP	TMCO4	0.602	1
TXNIP	17q-Amp	0.602	1
DNAH6	GNA13	0.602	1
DNAH6	Del_1q32.1	0.602	1
SPTAN1	17q-Amp	0.602	1
SPTAN1	Del_1q32.1	0.602	1
TMCO4	Amp_7p11.2	0.602	1
CDKN2A	ERBB2	0.603	1
CNNM4	Del_9p23	0.603	1
ELF3	Del_11p15.5	0.603	1
FOXQ1	5p-Amp	0.603	1
KLF5	ARID1B	0.603	1
KLF5	7p-Amp	0.603	1
MIPOL1	Del_9p23	0.603	1
RHOB	Amp_19q13.43	0.603	1
SF1	Del_9p23	0.603	1
TSC1	NEK11	0.603	1
TSC1	PPARGC1A	0.603	1
TSC1	TXNIP	0.603	1
TSC1	Amp_8p11.21	0.603	1
DCDC1	5p-Amp	0.603	1
NKX2-2	Del_9p23	0.603	1
PARD3	4q-Del	0.603	1
SF3B3	Amp_3p25.2	0.603	1
ARID1B	7p-Amp	0.603	1
ARID1B	4q-Del	0.603	1
FAM47C	Amp_3p25.2	0.603	1
1q-Amp	5p-Amp	0.603	1
C3orf70	PKHD1	0.604	1
C3orf70	Amp_16p13.2	0.604	1
CSMD3	Amp_19q12	0.604	1
CSMD3	Del_9p23	0.604	1
FBXW7	HRAS	0.604	1
FBXW7	ACTB	0.604	1
FBXW7	RIPK4	0.604	1
FBXW7	3p-Amp	0.604	1
HRAS	ATAD5	0.604	1
METTL3	Amp_8p11.21	0.604	1
NFE2L2	HSP90AA1	0.604	1
NFE2L2	Del_12p13.1	0.604	1
NRAS	4p-Del	0.604	1
PIK3CA	Del_17p12	0.604	1
PKHD1	ACTB	0.604	1
PKHD1	3p-Amp	0.604	1
RXRA	HSP90AA1	0.604	1
RXRA	ASXL1	0.604	1
ZFP36L1	Amp_13q22.1	0.604	1
ZFP36L2	ATAD5	0.604	1
ZFP36L2	MED13	0.604	1
ACTB	ATAD5	0.604	1
ACTB	Amp_16p13.2	0.604	1
ARID2	Amp_12q15	0.604	1
ARID2	Amp_13q22.1	0.604	1
ARID2	Del_16q23.1	0.604	1
ATAD5	RIPK4	0.604	1
ATAD5	CUL1	0.604	1
ATAD5	3p-Amp	0.604	1
CDK12	GLTP	0.604	1
CDK12	HLA-A	0.604	1
CDK12	UNC93B1	0.604	1
HSP90AA1	16p-Del	0.604	1
STK32B	Amp_20q11.21	0.604	1
UBA52	14q-Del	0.604	1
ZBTB47	14q-Del	0.604	1
ZBTB47	4p-Del	0.604	1
CNOT3	Amp_20q11.21	0.604	1
CUL1	Amp_16p13.2	0.604	1
16p-Del	Del_12p13.1	0.604	1
Amp_1p34.2	Amp_12q15	0.604	1
Amp_1p34.2	Del_16q23.1	0.604	1
Amp_6q21	Amp_20q11.21	0.604	1
ASXL2	Amp_5p15.33	0.605	1
CNNM4	EPHA2	0.605	1
CNNM4	HFM1	0.605	1
CNNM4	OGDH	0.605	1
DIAPH2	20p-Amp	0.605	1
DIAPH2	Del_22q13.32	0.605	1
GPS2	EPHA2	0.605	1
GPS2	HFM1	0.605	1
GPS2	KDM5A	0.605	1
MIPOL1	EPHA2	0.605	1
MIPOL1	HFM1	0.605	1
MIPOL1	KDM5A	0.605	1
MIPOL1	Amp_4p16.3	0.605	1
SF1	EPHA2	0.605	1
SF1	KDM5A	0.605	1
SF1	NCOA1	0.605	1
SF1	OGDH	0.605	1
SF1	Amp_4p16.3	0.605	1
ZNF511	HFM1	0.605	1
ZNF511	KDM5A	0.605	1
ZNF511	NCOA1	0.605	1
ZNF511	Amp_4p16.3	0.605	1
CPD	20p-Amp	0.605	1
HFM1	NKX2-2	0.605	1
KDM5A	TFG	0.605	1
NKX2-2	OGDH	0.605	1
SF3B3	Del_22q13.32	0.605	1
TRERF1	Del_22q13.32	0.605	1
CNOT1	Del_22q13.32	0.605	1
Amp_5p15.33	Amp_17q12	0.605	1
CDKN1A	ZNF180	0.606	1
CDKN1A	DDX3X	0.606	1
CDKN1A	Del_7q36.3	0.606	1
DIAPH2	IDH1	0.606	1
DIAPH2	POTEG	0.606	1
DIAPH2	SARNP	0.606	1
DIAPH2	OR10Z1	0.606	1
DIAPH2	FUS	0.606	1
KDM6A	FUT5	0.606	1
KDM6A	ZNF185	0.606	1
PIGS	RBM10	0.606	1
PIGS	SF3B3	0.606	1
POTEG	TRERF1	0.606	1
RPTN	11q-Del	0.606	1
RPTN	5q-Del	0.606	1
SARNP	FAM47C	0.606	1
SF3B1	Del_8p21.3	0.606	1
ZNF486	CPD	0.606	1
ZNF486	RBM10	0.606	1
ZNF486	TRERF1	0.606	1
ZNF486	CNOT1	0.606	1
CDKN2AIPNL	Amp_17q23.3	0.606	1
CPD	UGP2	0.606	1
CPD	FUS	0.606	1
CPD	Amp_22q12.2	0.606	1
DDX3X	5q-Del	0.606	1
DENND5B	Amp_7p11.2	0.606	1
MED13	Del_13q14.2	0.606	1
MYO16	Del_8p21.3	0.606	1
NAA15	5q-Del	0.606	1
NAA15	Del_19p13.3	0.606	1
NDC80	11q-Del	0.606	1
OR10Z1	RBM10	0.606	1
OR10Z1	TRERF1	0.606	1
RBM10	UGP2	0.606	1
RBM10	FUS	0.606	1
RBM10	Amp_22q12.2	0.606	1
SF3B3	FUS	0.606	1
TRERF1	UGP2	0.606	1
TRERF1	FUS	0.606	1
UGP2	FAM47C	0.606	1
FAM47C	FUS	0.606	1
FAM47C	Amp_22q12.2	0.606	1
19q-Amp	11q-Del	0.606	1
19q-Amp	5q-Del	0.606	1
5q-Del	Amp_4q13.3	0.606	1
Amp_4q13.3	Del_19p13.3	0.606	1
C12orf43	Del_5q12.1	0.607	1
COPZ2	Del_18q23	0.607	1
ELF3	14q-Del	0.607	1
ELF3	4p-Del	0.607	1
ELF3	Del_19p13.3	0.607	1
HIST1H2AG	9q-Del	0.607	1
HRAS	Del_2q37.1	0.607	1
KLF5	Amp_11q13.3	0.607	1
KPTN	8q-Amp	0.607	1
KPTN	Del_18q23	0.607	1
NHLRC1	9q-Del	0.607	1
NHLRC1	Del_5q12.1	0.607	1
PTTG1IP	Del_18q23	0.607	1
RB1	4q-Del	0.607	1
TGIF2LX	Del_5q12.1	0.607	1
CCNE2	Del_5q12.1	0.607	1
LETMD1	Del_5q12.1	0.607	1
PHLDA3	Del_5q12.1	0.607	1
SNRPB	9q-Del	0.607	1
TAF11	Del_5q12.1	0.607	1
ZNF626	Del_2q37.1	0.607	1
CUL1	Del_2q37.1	0.607	1
SCARF2	9q-Del	0.607	1
SCARF2	Del_5q12.1	0.607	1
17q-Amp	Del_2q37.1	0.607	1
7p-Amp	Amp_3q26.33	0.607	1
11q-Del	Amp_17q23.3	0.607	1
4q-Del	Amp_11q13.3	0.607	1
9q-Del	Del_22q13.32	0.607	1
Amp_11q13.3	Del_8p21.3	0.607	1
Del_2q37.1	Del_Xq21.33	0.607	1
ARID1A	ZNF486	0.608	1
ARID1A	OR10Z1	0.608	1
FBXW7	PLCXD3	0.608	1
HIST1H2AG	Amp_1q23.3	0.608	1
PIK3CA	AGR3	0.608	1
PIK3CA	RBP2	0.608	1
PKHD1	DAZAP1	0.608	1
PKHD1	Del_9p23	0.608	1
PLCXD3	ATAD5	0.608	1
PLCXD3	Amp_16p13.2	0.608	1
POTEG	Amp_5p15.33	0.608	1
TGIF2LX	Amp_1q23.3	0.608	1
ZNF486	Amp_5p15.33	0.608	1
AGR3	Amp_16p13.2	0.608	1
ATAD5	RBP2	0.608	1
CCNE2	Amp_1q23.3	0.608	1
DLX6	Del_4q22.1	0.608	1
MED13	RBP2	0.608	1
MED13	DAZAP1	0.608	1
SNRPB	Amp_1q23.3	0.608	1
DAZAP1	Amp_16p13.2	0.608	1
FUT5	Del_4q22.1	0.608	1
SCARF2	Amp_1q23.3	0.608	1
ZNF185	Del_4q22.1	0.608	1
ARID1A	6q-Del	0.609	1
ARID1A	Del_8p23.3	0.609	1
CREBBP	8p-Del	0.609	1
KDM6A	17q-Amp	0.609	1
PIK3CA	ARID1B	0.609	1
FAT1	Del_6q27	0.609	1
FAT1	Del_11q25	0.609	1
ASXL1	Del_2q37.1	0.609	1
20q-Amp	Del_6q27	0.609	1
Amp_12q15	Del_3p14.2	0.609	1
C3orf70	PSMC6	0.61	1
C3orf70	Amp_6q21	0.61	1
CDKN1A	Amp_22q12.2	0.61	1
CSMD3	EP300	0.61	1
ELF3	Amp_4p16.3	0.61	1
HORMAD1	HRAS	0.61	1
HORMAD1	3p-Amp	0.61	1
HRAS	NF2	0.61	1
HRAS	ZBTB7B	0.61	1
HRAS	PSMC6	0.61	1
HRAS	ZNF773	0.61	1
HRAS	Amp_6q21	0.61	1
NF2	ZFP36L2	0.61	1
NF2	ACTB	0.61	1
NF2	RIPK4	0.61	1
NF2	3p-Amp	0.61	1
PIK3CA	Amp_10p14	0.61	1
ZBTB7B	RIPK4	0.61	1
ZBTB7B	ZNF626	0.61	1
ZBTB7B	CUL1	0.61	1
ZBTB7B	3p-Amp	0.61	1
ZFP36L1	Amp_6p22.3	0.61	1
ZFP36L2	CNOT3	0.61	1
ZFP36L2	Amp_6q21	0.61	1
PSMC6	RIPK4	0.61	1
PSMC6	SLC9A4	0.61	1
PSMC6	ZNF626	0.61	1
PSMC6	CUL1	0.61	1
PSMC6	3p-Amp	0.61	1
RIPK4	CNOT3	0.61	1
RIPK4	ZNF773	0.61	1
SLC9A4	CNOT3	0.61	1
SLC9A4	Amp_6q21	0.61	1
STK32B	CUL1	0.61	1
STK32B	3p-Amp	0.61	1
ZNF626	CNOT3	0.61	1
CNOT3	3p-Amp	0.61	1
ZNF773	3p-Amp	0.61	1
3p-Amp	Amp_6q21	0.61	1
5q-Del	Amp_22q12.2	0.61	1
CDKN2A	PSIP1	0.611	1
CDKN2A	15q-Del	0.611	1
RHOB	15q-Del	0.611	1
TBC1D12	Amp_1q21.3	0.611	1
CPD	Del_17p12	0.611	1
EPHA2	9q-Del	0.611	1
MARK2	Amp_10p14	0.611	1
PPP4R1	Amp_10p14	0.611	1
RBM10	Del_17p12	0.611	1
TRERF1	Del_17p12	0.611	1
USP28	Amp_10p14	0.611	1
FAM47C	Del_17p12	0.611	1
20p-Amp	Del_6q27	0.611	1
CREBBP	HORMAD1	0.612	1
CREBBP	ZBTB7B	0.612	1
CREBBP	PSMC6	0.612	1
CTNNB1	Del_4q22.1	0.612	1
FOXQ1	Del_4q22.1	0.612	1
FOXQ1	Del_9p23	0.612	1
GPR50	Del_9p23	0.612	1
NF2	Amp_7p21.1	0.612	1
NF2	Del_6q27	0.612	1
PTEN	Del_4q22.1	0.612	1
TBC1D12	ZBTB7B	0.612	1
TBC1D12	STK32B	0.612	1
TBC1D12	Amp_6q21	0.612	1
ZBTB7B	Amp_7p21.1	0.612	1
CASP8	Del_4q22.1	0.612	1
DCDC1	Del_9p23	0.612	1
IKZF2	Del_9p23	0.612	1
PSMC6	Del_6q27	0.612	1
STK32B	Del_6q27	0.612	1
ZNF750	Del_9p23	0.612	1
Amp_10p14	Del_19p13.3	0.612	1
FGFR3	HSP90AA1	0.613	1
HIST1H3B	Amp_12q15	0.613	1
HIST1H3B	Amp_13q22.1	0.613	1
HIST1H3B	Del_16q23.1	0.613	1
STAG2	ASXL1	0.613	1
STAG2	Del_12p13.1	0.613	1
HSP90AA1	Del_16p13.3	0.613	1
ASXL1	Amp_8p11.23	0.613	1
ASXL1	Del_16p13.3	0.613	1
GNA13	Amp_13q22.1	0.613	1
TMCO4	Amp_12q15	0.613	1
17q-Amp	Amp_13q22.1	0.613	1
Amp_12q15	Del_1q32.1	0.613	1
Del_1q32.1	Del_6p25.3	0.613	1
Del_12p13.1	Del_16p13.3	0.613	1
BTG2	KLF5	0.614	1
BTG2	PARD3	0.614	1
BTG2	ARID1B	0.614	1
BTG2	7p-Amp	0.614	1
BTG2	4q-Del	0.614	1
C12orf43	7p-Amp	0.614	1
C12orf43	4q-Del	0.614	1
FOXA1	TP53	0.614	1
FOXQ1	TP53	0.614	1
HIST1H2AG	KLF5	0.614	1
HIST1H2AG	PARD3	0.614	1
HIST1H2AG	ARID1B	0.614	1
KLF5	NHLRC1	0.614	1
KLF5	TGIF2LX	0.614	1
KLF5	IL10RB	0.614	1
KLF5	PHLDA3	0.614	1
KLF5	TAF11	0.614	1
NF1	ZFP36L1	0.614	1
NHLRC1	7p-Amp	0.614	1
NHLRC1	4q-Del	0.614	1
TBC1D12	Amp_19q13.43	0.614	1
TP53	IKZF2	0.614	1
CCNE2	7p-Amp	0.614	1
IL10RB	7p-Amp	0.614	1
IL10RB	4q-Del	0.614	1
LETMD1	ARID1B	0.614	1
NDC80	Amp_1q21.3	0.614	1
PHLDA3	ARID1B	0.614	1
PHLDA3	4q-Del	0.614	1
SNRPB	7p-Amp	0.614	1
SNRPB	4q-Del	0.614	1
TAF11	4q-Del	0.614	1
ARID1B	SCARF2	0.614	1
ARID1B	19p-Del	0.614	1
SCARF2	4q-Del	0.614	1
3p-Amp	Del_17p12	0.614	1
7p-Amp	19p-Del	0.614	1
19p-Del	4q-Del	0.614	1
9q-Del	Amp_17q12	0.614	1
BTG2	Del_13q14.2	0.615	1
C12orf43	Del_13q14.2	0.615	1
C3orf70	Del_2q34	0.615	1
CSMD3	POTEG	0.615	1
EP300	5p-Amp	0.615	1
KRAS	Del_8p21.3	0.615	1
DCDC1	Del_8p21.3	0.615	1
IKZF2	Del_8p21.3	0.615	1
PHLDA3	Del_13q14.2	0.615	1
RIPK4	Del_2q34	0.615	1
TAF11	Del_13q14.2	0.615	1
TRERF1	Del_11p15.5	0.615	1
BAP1	Del_8p21.3	0.615	1
CDH1	Del_8p21.3	0.615	1
CUL1	Del_2q34	0.615	1
HLA-A	Del_2q37.1	0.615	1
UNC93B1	Del_2q37.1	0.615	1
5p-Amp	Del_2q22.1	0.615	1
ASXL2	DLX6	0.616	1
CDKN2A	NRAS	0.616	1
CDKN2A	GLTP	0.616	1
CDKN2A	ZBTB47	0.616	1
CDKN2A	HLA-A	0.616	1
ERBB3	KDM6A	0.616	1
NRAS	RHOB	0.616	1
RHOB	GLTP	0.616	1
RHOB	UBA52	0.616	1
RHOB	HLA-A	0.616	1
FUT5	Amp_17q12	0.616	1
ZNF185	Amp_17q12	0.616	1
GTF2I	Amp_3q26.33	0.617	1
ITGA4	Amp_3q26.33	0.617	1
ITGA4	Amp_11q13.3	0.617	1
NEK11	Del_10q23.31	0.617	1
SSH3	Del_10q23.31	0.617	1
ASXL2	RXRA	0.618	1
ASXL2	MYO16	0.618	1
ASXL2	Amp_11q22.2	0.618	1
CDKN1A	Amp_8p11.23	0.618	1
COPZ2	Del_9p21.3	0.618	1
ERBB2	RHOA	0.618	1
GPS2	Del_2q34	0.618	1
GTF2I	3q-Amp	0.618	1
GTF2I	Del_15q13.1	0.618	1
KPTN	Del_9p21.3	0.618	1
MIPOL1	Del_2q34	0.618	1
NF1	PLCXD3	0.618	1
NF1	ADC	0.618	1
PIK3CA	Del_2q22.1	0.618	1
PTTG1IP	Del_9p21.3	0.618	1
RXRA	Amp_17q12	0.618	1
SF3B1	Amp_17q12	0.618	1
STAG2	Del_19p13.3	0.618	1
ZNF511	Del_2q34	0.618	1
CDK12	Amp_4p16.3	0.618	1
EPHA2	4p-Del	0.618	1
HFM1	14q-Del	0.618	1
HFM1	4p-Del	0.618	1
ITGA4	10q-Del	0.618	1
ITGA4	Del_15q13.1	0.618	1
KDM5A	14q-Del	0.618	1
KDM5A	4p-Del	0.618	1
MYO16	Del_2q34	0.618	1
NCOA1	4p-Del	0.618	1
SSH3	3q-Amp	0.618	1
SSH3	Del_15q13.1	0.618	1
TXNIP	10q-Del	0.618	1
TXNIP	Del_15q13.1	0.618	1
Amp_7p11.2	Del_4q34.2	0.618	1
Amp_11q22.2	Amp_17q12	0.618	1
CFHR4	CTNNB1	0.619	1
CFHR4	FOXA1	0.619	1
CFHR4	NFE2L3	0.619	1
CFHR4	RUNX1	0.619	1
CFHR4	IKZF2	0.619	1
CFHR4	WAC	0.619	1
CFHR4	ZNF750	0.619	1
CFHR4	BAP1	0.619	1
CFHR4	EPS8	0.619	1
CFHR4	Del_1p36.11	0.619	1
CTNNB1	CTCF	0.619	1
CTNNB1	DPYS	0.619	1
CTNNB1	MBD1	0.619	1
CTNNB1	PPP4R1	0.619	1
CTNNB1	USP28	0.619	1
CTNNB1	Del_Xp11.3	0.619	1
FOXA1	PROS1	0.619	1
FOXA1	DPYS	0.619	1
FOXA1	MBD1	0.619	1
FOXA1	PPARG	0.619	1
FOXA1	Del_Xp11.3	0.619	1
FOXQ1	PROS1	0.619	1
FOXQ1	PPARG	0.619	1
FOXQ1	USP28	0.619	1
GPR50	MARK2	0.619	1
GPR50	MBD1	0.619	1
GPR50	PPARG	0.619	1
GPR50	PPP4R1	0.619	1
GPR50	USP28	0.619	1
KRAS	DPYS	0.619	1
KRAS	MARK2	0.619	1
KRAS	MBD1	0.619	1
KRAS	PPARG	0.619	1
KRAS	PPP4R1	0.619	1
KRAS	Del_Xp11.3	0.619	1
MIPOL1	PIK3CA	0.619	1
NFE2L3	MBD1	0.619	1
NFE2L3	PPARG	0.619	1
NFE2L3	USP28	0.619	1
PIK3CA	ZNF511	0.619	1
PROS1	DCDC1	0.619	1
PROS1	EXOSC10	0.619	1
PROS1	IKZF2	0.619	1
PROS1	WAC	0.619	1
PROS1	1q-Amp	0.619	1
PTEN	CTCF	0.619	1
PTEN	MARK2	0.619	1
PTEN	MBD1	0.619	1
PTEN	PPARG	0.619	1
PTEN	PPP4R1	0.619	1
PTEN	USP28	0.619	1
PTEN	Del_Xp11.3	0.619	1
RUNX1	Del_Xp11.3	0.619	1
CASP8	DPYS	0.619	1
CASP8	MARK2	0.619	1
CASP8	PPARG	0.619	1
CASP8	Del_Xp11.3	0.619	1
CTCF	EXOSC10	0.619	1
CTCF	BAP1	0.619	1
CTCF	EPS8	0.619	1
CTCF	Del_1p36.11	0.619	1
DCDC1	MBD1	0.619	1
DPYS	EXOSC10	0.619	1
DPYS	IKZF2	0.619	1
DPYS	WAC	0.619	1
DPYS	ZNF750	0.619	1
DPYS	BAP1	0.619	1
DPYS	CDH1	0.619	1
DPYS	Del_1p36.11	0.619	1
EXOSC10	MBD1	0.619	1
EXOSC10	PPARG	0.619	1
EXOSC10	PPP4R1	0.619	1
EXOSC10	Del_Xp11.3	0.619	1
MARK2	BAP1	0.619	1
MARK2	CDH1	0.619	1
MARK2	EPS8	0.619	1
MARK2	1q-Amp	0.619	1
MARK2	Del_1p36.11	0.619	1
MARK2	Del_17p12	0.619	1
MBD1	THRAP3	0.619	1
MBD1	ZNF750	0.619	1
MBD1	Del_1p36.11	0.619	1
PPARG	THRAP3	0.619	1
PPARG	WAC	0.619	1
PPARG	BAP1	0.619	1
PPARG	CDH1	0.619	1
PPARG	EPS8	0.619	1
PPARG	1q-Amp	0.619	1
PPARG	Del_1p36.11	0.619	1
PPARG	Del_17p12	0.619	1
PPP4R1	BAP1	0.619	1
PPP4R1	CDH1	0.619	1
PPP4R1	Del_1p36.11	0.619	1
THRAP3	Del_Xp11.3	0.619	1
USP28	ZNF750	0.619	1
USP28	CDH1	0.619	1
USP28	1q-Amp	0.619	1
BAP1	Del_Xp11.3	0.619	1
1q-Amp	Del_Xp11.3	0.619	1
CDKN2A	17p-Del	0.62	1
CDKN2A	Del_11q25	0.62	1
CREBBP	RHOB	0.62	1
DIAPH2	ERBB3	0.62	1
ERBB3	FAM47C	0.62	1
KDM6A	HFM1	0.62	1
NF1	ZFP36L2	0.62	1
NF1	CUL1	0.62	1
NF2	Del_8p23.3	0.62	1
RPTN	Amp_19q13.43	0.62	1
ZBTB7B	Del_8p23.3	0.62	1
ZNF180	Amp_19q13.43	0.62	1
CDKN2AIPNL	Amp_7p11.2	0.62	1
FAT1	Amp_3q26.33	0.62	1
FAT1	Amp_11q13.3	0.62	1
Amp_6q21	Del_8p23.3	0.62	1
ATM	KLF5	0.621	1
CNNM4	RHOA	0.621	1
CNNM4	SHANK1	0.621	1
GPS2	SHANK1	0.621	1
IDH1	7q-Amp	0.621	1
METTL3	MIPOL1	0.621	1
METTL3	NKX2-2	0.621	1
MIPOL1	SHANK1	0.621	1
PIGS	DENND5B	0.621	1
PIGS	RBM26	0.621	1
POTEG	7q-Amp	0.621	1
POTEG	15q-Del	0.621	1
PSIP1	ZNF486	0.621	1
PSIP1	OR10Z1	0.621	1
PSIP1	FUS	0.621	1
SARNP	DENND5B	0.621	1
SARNP	7q-Amp	0.621	1
SHANK1	NKX2-2	0.621	1
ZNF486	DENND5B	0.621	1
ZNF486	RBM26	0.621	1
ZNF486	15q-Del	0.621	1
ATAD5	5p-Amp	0.621	1
CTCF	8p-Del	0.621	1
DENND5B	UGP2	0.621	1
DENND5B	FUS	0.621	1
DENND5B	17p-Del	0.621	1
DENND5B	Amp_12q15	0.621	1
DENND5B	Del_6p25.3	0.621	1
DENND5B	Del_16q23.1	0.621	1
MBD1	Amp_8q22.3	0.621	1
OR10Z1	15q-Del	0.621	1
PPP4R1	8p-Del	0.621	1
PPP4R1	Amp_8q22.3	0.621	1
RBM26	UGP2	0.621	1
UGP2	7q-Amp	0.621	1
UGP2	15q-Del	0.621	1
ARID1B	Del_4q34.2	0.621	1
FUS	7q-Amp	0.621	1
FUS	15q-Del	0.621	1
SPTAN1	Amp_17q12	0.621	1
5p-Amp	Amp_16p13.2	0.621	1
7q-Amp	11p-Del	0.621	1
7q-Amp	17p-Del	0.621	1
15q-Del	Del_6p25.3	0.621	1
8p-Del	Del_Xp11.3	0.621	1
Amp_8q22.3	Del_Xp11.3	0.621	1
EP300	3q-Amp	0.622	1
EP300	Del_15q13.1	0.622	1
HIST1H3B	ZNF180	0.622	1
HIST1H3B	DDX3X	0.622	1
HIST1H3B	19q-Amp	0.622	1
RPTN	GNA13	0.622	1
SF3B1	8p-Del	0.622	1
TP53	GNA13	0.622	1
TP53	Del_1q32.1	0.622	1
ZNF180	GNA13	0.622	1
ARID2	20p-Amp	0.622	1
ARID2	Del_22q13.32	0.622	1
DDX3X	GNA13	0.622	1
DDX3X	TMCO4	0.622	1
DDX3X	17q-Amp	0.622	1
NAA15	GNA13	0.622	1
NAA15	17q-Amp	0.622	1
NDC80	GNA13	0.622	1
NDC80	TMCO4	0.622	1
NDC80	17q-Amp	0.622	1
RARG	TMCO4	0.622	1
RARG	Del_1q32.1	0.622	1
UBA52	Amp_8q22.3	0.622	1
GNA13	Amp_4q13.3	0.622	1
GNA13	Del_7q36.3	0.622	1
TMCO4	19q-Amp	0.622	1
UNC93B1	Amp_8q22.3	0.622	1
17q-Amp	Del_7q36.3	0.622	1
19q-Amp	Del_Xq21.33	0.622	1
8p-Del	Amp_11q22.2	0.622	1
Amp_4q13.3	Del_1q32.1	0.622	1
Amp_11q13.3	Del_6p25.3	0.622	1
Amp_11q13.3	Del_16q23.1	0.622	1
Del_1q32.1	Del_7q36.3	0.622	1
Del_7q36.3	Del_Xq21.33	0.622	1
ATM	Del_5q12.1	0.623	1
BTG2	5p-Amp	0.623	1
CDKN2A	TSC1	0.623	1
COPZ2	CSMD3	0.623	1
CSMD3	KPTN	0.623	1
ELF3	HORMAD1	0.623	1
ELF3	STK32B	0.623	1
ELF3	CNOT3	0.623	1
ELF3	Amp_6q21	0.623	1
ERCC2	10q-Del	0.623	1
PROS1	18q-Del	0.623	1
PROS1	Del_14q24.1	0.623	1
STAG2	Amp_1q23.3	0.623	1
ATAD5	Del_2q34	0.623	1
CTCF	Del_14q24.1	0.623	1
FAT1	Del_14q24.1	0.623	1
HSP90AA1	18q-Del	0.623	1
IL10RB	5p-Amp	0.623	1
ITGA4	Del_11p15.5	0.623	1
MARK2	Del_14q24.1	0.623	1
MBD1	Del_14q24.1	0.623	1
MED13	Del_2q34	0.623	1
NEK11	Del_11p15.5	0.623	1
PHLDA3	5p-Amp	0.623	1
PPARG	Del_14q24.1	0.623	1
PPARGC1A	Del_11p15.5	0.623	1
STK32B	Del_3p14.2	0.623	1
TXNIP	Del_11p15.5	0.623	1
USP28	18q-Del	0.623	1
OGDH	Del_13q14.2	0.623	1
ZNF773	Del_3p14.2	0.623	1
5p-Amp	19p-Del	0.623	1
Amp_6q21	Amp_17q23.3	0.623	1
Amp_6q21	Del_3p14.2	0.623	1
Del_14q24.1	Del_Xp11.3	0.623	1
CSMD3	RPTN	0.624	1
CSMD3	DDX3X	0.624	1
CSMD3	Del_7q36.3	0.624	1
FGFR3	FUS	0.624	1
IDH1	Amp_8p11.23	0.624	1
IDH1	Del_16p13.3	0.624	1
POTEG	Del_16p13.3	0.624	1
ZNF486	Amp_8p11.23	0.624	1
ZNF486	Del_16p13.3	0.624	1
ARID2	Amp_20q11.21	0.624	1
NAA15	Amp_6p22.3	0.624	1
NEK11	Amp_8q22.3	0.624	1
UGP2	Del_16p13.3	0.624	1
FUS	Amp_8p11.23	0.624	1
FUS	Del_16p13.3	0.624	1
Amp_4q13.3	Amp_6p22.3	0.624	1
CDKN1A	DLX6	0.625	1
CDKN1A	ZNF185	0.625	1
EP300	RUNX1	0.625	1
EP300	CDH1	0.625	1
EP300	EPS8	0.625	1
FOXA1	11p-Del	0.625	1
GPR50	17p-Del	0.625	1
HIST1H3B	Del_22q13.32	0.625	1
KLF5	Del_12p13.1	0.625	1
NFE2L3	11p-Del	0.625	1
NFE2L3	17p-Del	0.625	1
PTEN	17p-Del	0.625	1
RUNX1	17p-Del	0.625	1
DCDC1	11p-Del	0.625	1
DCDC1	17p-Del	0.625	1
DLX6	11q-Del	0.625	1
DLX6	Del_19p13.3	0.625	1
HSP90AA1	ARID1B	0.625	1
HSP90AA1	7p-Amp	0.625	1
IKZF2	11p-Del	0.625	1
IKZF2	17p-Del	0.625	1
PARD3	Del_12p13.1	0.625	1
WAC	11p-Del	0.625	1
ARID1B	Del_12p13.1	0.625	1
BAP1	11p-Del	0.625	1
FUT5	11q-Del	0.625	1
ZNF185	5q-Del	0.625	1
ZNF185	Del_19p13.3	0.625	1
17q-Amp	20p-Amp	0.625	1
17q-Amp	Del_22q13.32	0.625	1
1q-Amp	11p-Del	0.625	1
20p-Amp	Del_Xq21.33	0.625	1
ASXL2	CTNNB1	0.626	1
ASXL2	FOXA1	0.626	1
ASXL2	FOXQ1	0.626	1
ASXL2	GPR50	0.626	1
ASXL2	PTEN	0.626	1
ASXL2	DCDC1	0.626	1
ASXL2	EXOSC10	0.626	1
ASXL2	BAP1	0.626	1
ASXL2	CDH1	0.626	1
FOXQ1	Amp_17q12	0.626	1
KRAS	Amp_17q12	0.626	1
NFE2L2	CNOT1	0.626	1
PTEN	Amp_17q12	0.626	1
RXRA	CPD	0.626	1
RXRA	SF3B3	0.626	1
SF3B1	CPD	0.626	1
SF3B1	RBM10	0.626	1
SF3B1	FAM47C	0.626	1
CASP8	Amp_17q12	0.626	1
CPD	MYO16	0.626	1
CPD	16p-Del	0.626	1
MYO16	RBM10	0.626	1
RBM10	Amp_11q22.2	0.626	1
SF3B3	22q-Del	0.626	1
TRERF1	Amp_11q22.2	0.626	1
CNOT1	Amp_11q22.2	0.626	1
EPS8	Amp_17q12	0.626	1
FAM47C	16p-Del	0.626	1
FAM47C	22q-Del	0.626	1
FAM47C	Amp_11q22.2	0.626	1
8q-Amp	Del_2q34	0.626	1
22q-Del	Amp_6p22.3	0.626	1
Amp_11q13.3	Amp_17q12	0.626	1
Amp_17q12	Del_1p36.11	0.626	1
BTG2	HSP90AA1	0.627	1
C12orf43	Del_12p13.1	0.627	1
HIST1H2AG	Del_12p13.1	0.627	1
NHLRC1	HSP90AA1	0.627	1
NHLRC1	ASXL1	0.627	1
TGIF2LX	Del_12p13.1	0.627	1
CDKN2AIPNL	Amp_12q15	0.627	1
CDKN2AIPNL	Del_6p25.3	0.627	1
CDKN2AIPNL	Del_16q23.1	0.627	1
HSP90AA1	SNRPB	0.627	1
HSP90AA1	SCARF2	0.627	1
IL10RB	Del_12p13.1	0.627	1
KDM5A	Amp_8q22.3	0.627	1
PHLDA3	Del_12p13.1	0.627	1
SNRPB	ASXL1	0.627	1
SNRPB	Del_12p13.1	0.627	1
TAF11	Del_12p13.1	0.627	1
ASXL1	19p-Del	0.627	1
SCARF2	Del_12p13.1	0.627	1
5p-Amp	Amp_22q12.2	0.627	1
19p-Del	Del_12p13.1	0.627	1
C3orf70	20q-Amp	0.628	1
CNNM4	FAT1	0.628	1
FBXW7	Del_14q24.1	0.628	1
GPS2	20q-Amp	0.628	1
GTF2I	ZBTB7B	0.628	1
HORMAD1	SSH3	0.628	1
HORMAD1	TXNIP	0.628	1
MIPOL1	FAT1	0.628	1
MIPOL1	20q-Amp	0.628	1
NF2	DNAH6	0.628	1
ZBTB7B	NEK11	0.628	1
ZBTB7B	PPARGC1A	0.628	1
ZBTB7B	SSH3	0.628	1
ZFP36L2	20q-Amp	0.628	1
ZFP36L2	Del_11q23.3	0.628	1
ATAD5	18q-Del	0.628	1
ATAD5	Del_14q24.1	0.628	1
FAT1	NKX2-2	0.628	1
FAT1	TFG	0.628	1
GLTP	Amp_22q12.2	0.628	1
ITGA4	PSMC6	0.628	1
ITGA4	CNOT3	0.628	1
NEK11	CNOT3	0.628	1
NEK11	Amp_6q21	0.628	1
PPARGC1A	CNOT3	0.628	1
PPARGC1A	Amp_6q21	0.628	1
PSMC6	SSH3	0.628	1
RIPK4	Del_11q23.3	0.628	1
SSH3	Amp_6q21	0.628	1
STK32B	DNAH6	0.628	1
TFG	20q-Amp	0.628	1
TXNIP	ZNF773	0.628	1
UBA52	Amp_22q12.2	0.628	1
ZBTB47	Amp_22q12.2	0.628	1
ZNF626	20q-Amp	0.628	1
CNOT3	DNAH6	0.628	1
CUL1	20q-Amp	0.628	1
DNAH6	Amp_6q21	0.628	1
HLA-A	Amp_22q12.2	0.628	1
UNC93B1	Amp_22q12.2	0.628	1
20q-Amp	3p-Amp	0.628	1
COPZ2	FGFR3	0.629	1
COPZ2	STAG2	0.629	1
COPZ2	Del_16p13.3	0.629	1
CSMD3	TP53	0.629	1
CSMD3	Amp_7p21.1	0.629	1
EP300	Amp_6p22.3	0.629	1
ERCC2	Del_2q34	0.629	1
FGFR3	KPTN	0.629	1
FGFR3	PTTG1IP	0.629	1
KPTN	STAG2	0.629	1
PLCXD3	ZFP36L1	0.629	1
PLCXD3	ARID2	0.629	1
PLCXD3	Amp_1p34.2	0.629	1
PTTG1IP	STAG2	0.629	1
PTTG1IP	Amp_8p11.23	0.629	1
PTTG1IP	Del_16p13.3	0.629	1
ZBTB7B	Amp_3p25.2	0.629	1
ZFP36L1	AGR3	0.629	1
ZFP36L1	RBP2	0.629	1
ZFP36L1	ADC	0.629	1
AGR3	ARID2	0.629	1
AGR3	Amp_1p34.2	0.629	1
ARID2	RBP2	0.629	1
ARID2	ADC	0.629	1
ARID2	DAZAP1	0.629	1
PSMC6	Amp_3p25.2	0.629	1
RBP2	Amp_1p34.2	0.629	1
STK32B	Amp_3p25.2	0.629	1
ADC	Amp_1p34.2	0.629	1
ATM	GTF2I	0.63	1
CSMD3	Amp_20q11.21	0.63	1
PIGS	Del_17p12	0.63	1
POTEG	Del_17p12	0.63	1
HSP90AA1	Amp_8q22.3	0.63	1
SSH3	Del_4q34.2	0.63	1
ASXL1	Amp_8q22.3	0.63	1
DNAH6	Del_4q34.2	0.63	1
10q-Del	Amp_8p11.21	0.63	1
ARID1A	Del_11q25	0.631	1
ASXL2	Del_13q14.2	0.631	1
CNNM4	TP53	0.631	1
CREBBP	RHOA	0.631	1
CREBBP	SHANK1	0.631	1
CREBBP	Del_2q22.1	0.631	1
CTNNB1	PIK3CA	0.631	1
FOXA1	PIK3CA	0.631	1
PIK3CA	CASP8	0.631	1
PIK3CA	WAC	0.631	1
PIK3CA	ZNF750	0.631	1
PROS1	Del_5q12.1	0.631	1
TP53	NKX2-2	0.631	1
TP53	TFG	0.631	1
ZFP36L2	Del_8p21.3	0.631	1
DPYS	9q-Del	0.631	1
MBD1	Del_5q12.1	0.631	1
Amp_8p11.21	Del_11q25	0.631	1
CDKN2A	KDM6A	0.632	1
CSMD3	Del_18q23	0.632	1
ELF3	FAT1	0.632	1
20p-Amp	Del_3p14.2	0.632	1
Amp_1p34.2	Amp_3q26.33	0.632	1
Amp_17q23.3	Del_11q23.3	0.632	1
NFE2L2	Del_11q23.3	0.633	1
PLCXD3	Amp_1q21.3	0.633	1
RXRA	FAT1	0.633	1
RXRA	Del_11q23.3	0.633	1
FAT1	22q-Del	0.633	1
ARID1A	Del_16q23.1	0.634	1
ERBB3	Amp_8p11.23	0.634	1
ERBB3	Del_11q25	0.634	1
PKHD1	PPARGC1A	0.634	1
PKHD1	TXNIP	0.634	1
STAG2	17p-Del	0.634	1
ZNF180	Amp_20q11.21	0.634	1
ATAD5	TXNIP	0.634	1
CDKN2AIPNL	20p-Amp	0.634	1
DLX6	Amp_19q13.43	0.634	1
RARG	Amp_20q11.21	0.634	1
TXNIP	Amp_16p13.2	0.634	1
ZNF185	Amp_19q13.43	0.634	1
11p-Del	Amp_8p11.23	0.634	1
Amp_20q11.21	Del_7q36.3	0.634	1
CFHR4	ERCC2	0.635	1
ERCC2	PROS1	0.635	1
ERCC2	CTCF	0.635	1
ERCC2	PPARG	0.635	1
ERCC2	Amp_20q11.21	0.635	1
ERCC2	Del_Xp11.3	0.635	1
GPR50	8q-Amp	0.635	1
HIST1H3B	9p-Del	0.635	1
KRAS	Del_9p21.3	0.635	1
NFE2L2	9q-Del	0.635	1
NFE2L3	8q-Amp	0.635	1
NFE2L3	Del_18q23	0.635	1
PTEN	8q-Amp	0.635	1
RB1	Del_1q32.1	0.635	1
TSC1	ZNF180	0.635	1
TSC1	RARG	0.635	1
TSC1	19q-Amp	0.635	1
TSC1	Amp_4q13.3	0.635	1
EXOSC10	Del_18q23	0.635	1
HFM1	5p-Amp	0.635	1
IKZF2	8q-Amp	0.635	1
IKZF2	Del_9p21.3	0.635	1
IKZF2	Del_18q23	0.635	1
MYO16	Del_5q12.1	0.635	1
PSMC6	Amp_1q23.3	0.635	1
WAC	8q-Amp	0.635	1
CDH1	8q-Amp	0.635	1
CDH1	Del_9p21.3	0.635	1
CDH1	Del_18q23	0.635	1
16p-Del	9q-Del	0.635	1
9q-Del	Amp_11q22.2	0.635	1
CDKN1A	NFE2L2	0.636	1
CDKN1A	RXRA	0.636	1
CDKN1A	SF3B1	0.636	1
CDKN1A	22q-Del	0.636	1
CDKN2A	Amp_4p16.3	0.636	1
FGFR3	DDX3X	0.636	1
FGFR3	NDC80	0.636	1
FGFR3	RARG	0.636	1
FGFR3	Del_7q36.3	0.636	1
NFE2L2	11q-Del	0.636	1
NRAS	RB1	0.636	1
NRAS	9p-Del	0.636	1
PIGS	HFM1	0.636	1
PIGS	KDM5A	0.636	1
POTEG	Amp_4p16.3	0.636	1
RB1	UBA52	0.636	1
RHOB	Del_3p14.2	0.636	1
RPTN	STAG2	0.636	1
RPTN	Del_16p13.3	0.636	1
RXRA	11q-Del	0.636	1
SARNP	EPHA2	0.636	1
SF3B1	11q-Del	0.636	1
STAG2	Amp_4q13.3	0.636	1
STAG2	Del_7q36.3	0.636	1
ZNF486	EPHA2	0.636	1
ZNF486	KDM5A	0.636	1
ZNF486	OGDH	0.636	1
ZNF486	Amp_4p16.3	0.636	1
DDX3X	Del_16p13.3	0.636	1
EPHA2	UGP2	0.636	1
HFM1	FUS	0.636	1
KDM5A	OR10Z1	0.636	1
MYO16	5q-Del	0.636	1
NAA15	Del_16p13.3	0.636	1
NCOA1	OR10Z1	0.636	1
NCOA1	FUS	0.636	1
RBM26	Del_22q13.32	0.636	1
UGP2	OGDH	0.636	1
ZBTB47	9p-Del	0.636	1
FUS	Amp_4p16.3	0.636	1
Amp_11q22.2	Del_19p13.3	0.636	1
ERBB3	HIST1H3B	0.637	1
ERBB3	17q-Amp	0.637	1
ZFP36L1	ZNF626	0.637	1
ZFP36L1	CUL1	0.637	1
HFM1	Amp_1q21.3	0.637	1
3p-Amp	Amp_1p34.2	0.637	1
ARID1A	FUT5	0.638	1
C3orf70	CNNM4	0.638	1
C3orf70	GPS2	0.638	1
C3orf70	MIPOL1	0.638	1
C3orf70	SF1	0.638	1
C3orf70	ZNF511	0.638	1
C3orf70	NKX2-2	0.638	1
CNNM4	HRAS	0.638	1
CNNM4	ACTB	0.638	1
CNNM4	3p-Amp	0.638	1
CNNM4	Amp_8p11.21	0.638	1
ERCC2	RB1	0.638	1
GPS2	ZFP36L2	0.638	1
GPS2	RIPK4	0.638	1
GPS2	SLC9A4	0.638	1
GPS2	3p-Amp	0.638	1
GPS2	Amp_8p11.21	0.638	1
HRAS	MIPOL1	0.638	1
HRAS	NKX2-2	0.638	1
HRAS	TFG	0.638	1
MIPOL1	ZNF626	0.638	1
MIPOL1	3p-Amp	0.638	1
MIPOL1	Del_2q22.1	0.638	1
PKHD1	4p-Del	0.638	1
SF1	ACTB	0.638	1
SF1	RIPK4	0.638	1
SF1	CUL1	0.638	1
SF1	3p-Amp	0.638	1
ZBTB7B	Del_11p15.5	0.638	1
ZFP36L2	ZNF511	0.638	1
ZFP36L2	NKX2-2	0.638	1
ZNF511	ACTB	0.638	1
ZNF511	ZNF626	0.638	1
ZNF511	CUL1	0.638	1
ZNF511	3p-Amp	0.638	1
ZNF511	Amp_8p11.21	0.638	1
ACTB	TFG	0.638	1
ATAD5	4p-Del	0.638	1
DLX6	Amp_5p15.33	0.638	1
NKX2-2	SLC9A4	0.638	1
NKX2-2	3p-Amp	0.638	1
STK32B	Del_11p15.5	0.638	1
TFG	CUL1	0.638	1
TFG	3p-Amp	0.638	1
4p-Del	Amp_16p13.2	0.638	1
Amp_3p25.2	Amp_11q13.3	0.638	1
Amp_6q21	Del_11p15.5	0.638	1
C12orf43	EP300	0.639	1
C12orf43	11p-Del	0.639	1
C12orf43	17p-Del	0.639	1
CDKN1A	CTNNB1	0.639	1
CDKN1A	FOXA1	0.639	1
CDKN1A	FOXQ1	0.639	1
CDKN1A	GPR50	0.639	1
CDKN1A	RUNX1	0.639	1
CDKN1A	CASP8	0.639	1
CDKN1A	IKZF2	0.639	1
CDKN1A	EPS8	0.639	1
CDKN2A	Del_9p23	0.639	1
CTNNB1	11q-Del	0.639	1
EP300	HIST1H2AG	0.639	1
EP300	TGIF2LX	0.639	1
EP300	LETMD1	0.639	1
EP300	PHLDA3	0.639	1
GPR50	11q-Del	0.639	1
GPR50	5q-Del	0.639	1
HIST1H2AG	11p-Del	0.639	1
HIST1H2AG	17p-Del	0.639	1
KRAS	5q-Del	0.639	1
NFE2L3	11q-Del	0.639	1
NFE2L3	5q-Del	0.639	1
NHLRC1	11p-Del	0.639	1
NHLRC1	17p-Del	0.639	1
PLCXD3	Amp_6p22.3	0.639	1
PTEN	5q-Del	0.639	1
PTEN	Del_19p13.3	0.639	1
RXRA	Amp_20q11.21	0.639	1
TGIF2LX	17p-Del	0.639	1
CCNE2	17p-Del	0.639	1
DCDC1	5q-Del	0.639	1
DCDC1	Del_19p13.3	0.639	1
EXOSC10	11q-Del	0.639	1
EXOSC10	5q-Del	0.639	1
IKZF2	5q-Del	0.639	1
IKZF2	Del_19p13.3	0.639	1
IL10RB	17p-Del	0.639	1
LETMD1	17p-Del	0.639	1
PHLDA3	11p-Del	0.639	1
PHLDA3	17p-Del	0.639	1
RBP2	Amp_6p22.3	0.639	1
SNRPB	11p-Del	0.639	1
THRAP3	5q-Del	0.639	1
THRAP3	Del_19p13.3	0.639	1
WAC	11q-Del	0.639	1
WAC	Del_19p13.3	0.639	1
ZNF750	5q-Del	0.639	1
ZNF750	Del_19p13.3	0.639	1
ADC	Amp_6p22.3	0.639	1
BAP1	11q-Del	0.639	1
BAP1	5q-Del	0.639	1
BAP1	Del_19p13.3	0.639	1
CDH1	Del_19p13.3	0.639	1
EPS8	Del_19p13.3	0.639	1
SCARF2	17p-Del	0.639	1
1q-Amp	11q-Del	0.639	1
1q-Amp	5q-Del	0.639	1
CREBBP	TSC1	0.64	1
ERBB3	ZFP36L1	0.64	1
FBXW7	FAT1	0.64	1
FBXW7	20q-Amp	0.64	1
GPR50	Del_8p23.3	0.64	1
KPTN	Amp_11q13.3	0.64	1
NFE2L2	NRAS	0.64	1
NFE2L2	GLTP	0.64	1
NFE2L2	UBA52	0.64	1
NFE2L2	HLA-A	0.64	1
NFE2L2	UNC93B1	0.64	1
NRAS	MYO16	0.64	1
NRAS	16p-Del	0.64	1
NRAS	22q-Del	0.64	1
PTTG1IP	Amp_3q26.33	0.64	1
PTTG1IP	Amp_11q13.3	0.64	1
PTTG1IP	Del_10q23.31	0.64	1
RB1	3p-Amp	0.64	1
RXRA	GLTP	0.64	1
RXRA	UBA52	0.64	1
RXRA	ZBTB47	0.64	1
RXRA	HLA-A	0.64	1
SF3B1	GLTP	0.64	1
SF3B1	UBA52	0.64	1
SF3B1	ZBTB47	0.64	1
SF3B1	UNC93B1	0.64	1
TSC1	Del_11q25	0.64	1
ATAD5	FAT1	0.64	1
ATAD5	20q-Amp	0.64	1
CPD	Amp_1q23.3	0.64	1
GLTP	16p-Del	0.64	1
GLTP	22q-Del	0.64	1
GLTP	Amp_11q22.2	0.64	1
IKZF2	Del_8p23.3	0.64	1
MED13	20q-Amp	0.64	1
MED13	Del_11q23.3	0.64	1
RIPK4	9p-Del	0.64	1
UBA52	22q-Del	0.64	1
UBA52	Amp_11q22.2	0.64	1
ZBTB47	16p-Del	0.64	1
ZBTB47	22q-Del	0.64	1
ZBTB47	Amp_11q22.2	0.64	1
CDH1	Del_8p23.3	0.64	1
CNOT1	Amp_1q23.3	0.64	1
HLA-A	22q-Del	0.64	1
HLA-A	Amp_11q22.2	0.64	1
UNC93B1	16p-Del	0.64	1
UNC93B1	22q-Del	0.64	1
UNC93B1	Amp_11q22.2	0.64	1
8q-Amp	Del_9p21.3	0.64	1
11q-Del	Amp_19q13.43	0.64	1
5q-Del	Amp_19q13.43	0.64	1
BTG2	DIAPH2	0.641	1
BTG2	CPD	0.641	1
BTG2	TRERF1	0.641	1
C12orf43	FAM47C	0.641	1
C3orf70	Del_2q22.1	0.641	1
CFHR4	MARK2	0.641	1
CFHR4	MBD1	0.641	1
CFHR4	PPP4R1	0.641	1
CFHR4	USP28	0.641	1
DIAPH2	LETMD1	0.641	1
DIAPH2	TAF11	0.641	1
DIAPH2	SCARF2	0.641	1
FGFR3	Del_10q23.31	0.641	1
GTF2I	Amp_5p15.33	0.641	1
HIST1H2AG	TRERF1	0.641	1
HIST1H2AG	FAM47C	0.641	1
HRAS	Amp_8p11.21	0.641	1
HRAS	Del_2q22.1	0.641	1
NHLRC1	CPD	0.641	1
NHLRC1	RBM10	0.641	1
NHLRC1	SF3B3	0.641	1
NHLRC1	FAM47C	0.641	1
PROS1	DPYS	0.641	1
PROS1	MBD1	0.641	1
PROS1	PPARG	0.641	1
PROS1	Del_Xp11.3	0.641	1
SHANK1	8p-Del	0.641	1
STAG2	Amp_11q13.3	0.641	1
TGIF2LX	FAM47C	0.641	1
ZFP36L2	Amp_8p11.21	0.641	1
ACTB	Amp_8p11.21	0.641	1
CCNE2	RBM10	0.641	1
CCNE2	FAM47C	0.641	1
CPD	IL10RB	0.641	1
CPD	LETMD1	0.641	1
CPD	SNRPB	0.641	1
CPD	TAF11	0.641	1
CPD	SCARF2	0.641	1
CTCF	DPYS	0.641	1
CTCF	Del_Xp11.3	0.641	1
DPYS	MARK2	0.641	1
DPYS	MBD1	0.641	1
DPYS	PPARG	0.641	1
DPYS	PPP4R1	0.641	1
DPYS	Del_Xp11.3	0.641	1
IL10RB	RBM10	0.641	1
IL10RB	SF3B3	0.641	1
IL10RB	CNOT1	0.641	1
LETMD1	RBM10	0.641	1
LETMD1	SF3B3	0.641	1
LETMD1	TRERF1	0.641	1
LETMD1	CNOT1	0.641	1
MARK2	PPP4R1	0.641	1
MARK2	USP28	0.641	1
MBD1	PPP4R1	0.641	1
MBD1	Del_Xp11.3	0.641	1
PHLDA3	SF3B3	0.641	1
PHLDA3	CNOT1	0.641	1
PPARG	PPP4R1	0.641	1
PPP4R1	Del_13q14.2	0.641	1
PPP4R1	Del_Xp11.3	0.641	1
RBM10	19p-Del	0.641	1
RIPK4	Amp_8p11.21	0.641	1
RIPK4	Del_2q22.1	0.641	1
SF3B3	SNRPB	0.641	1
SF3B3	SCARF2	0.641	1
SF3B3	19p-Del	0.641	1
SNRPB	FAM47C	0.641	1
TAF11	FAM47C	0.641	1
TRERF1	SCARF2	0.641	1
USP28	Del_Xp11.3	0.641	1
ASXL1	Del_10q23.31	0.641	1
CNOT1	19p-Del	0.641	1
FAM47C	SCARF2	0.641	1
FAM47C	19p-Del	0.641	1
SPTAN1	4p-Del	0.641	1
14q-Del	Amp_7p11.2	0.641	1
Amp_3q26.33	Del_12p13.1	0.641	1
Amp_11q13.3	Del_12p13.1	0.641	1
Amp_12q15	Amp_17q12	0.641	1
Amp_13q22.1	Amp_17q12	0.641	1
Del_13q14.2	Del_Xp11.3	0.641	1
CDKN2A	10q-Del	0.642	1
CTNNB1	HIST1H3B	0.642	1
CTNNB1	GNA13	0.642	1
ELF3	Amp_1q21.3	0.642	1
ERBB3	CDKN2AIPNL	0.642	1
FOXA1	HIST1H3B	0.642	1
FOXA1	GNA13	0.642	1
FOXA1	TMCO4	0.642	1
FOXQ1	GNA13	0.642	1
FOXQ1	TMCO4	0.642	1
FOXQ1	Del_Xq21.33	0.642	1
GPR50	GNA13	0.642	1
GPR50	17q-Amp	0.642	1
GPR50	Del_1q32.1	0.642	1
GPR50	Del_Xq21.33	0.642	1
HIST1H3B	KRAS	0.642	1
HIST1H3B	NFE2L3	0.642	1
HIST1H3B	DCDC1	0.642	1
HIST1H3B	IKZF2	0.642	1
HIST1H3B	THRAP3	0.642	1
HIST1H3B	EPS8	0.642	1
HIST1H3B	Del_1p36.11	0.642	1
IDH1	Amp_3q26.33	0.642	1
IDH1	Del_10q23.31	0.642	1
KRAS	GNA13	0.642	1
KRAS	TMCO4	0.642	1
KRAS	Del_Xq21.33	0.642	1
NFE2L3	GNA13	0.642	1
POTEG	Amp_11q13.3	0.642	1
POTEG	Del_10q23.31	0.642	1
PTEN	GNA13	0.642	1
PTEN	TMCO4	0.642	1
PTEN	17q-Amp	0.642	1
PTEN	Del_Xq21.33	0.642	1
RUNX1	TMCO4	0.642	1
RUNX1	17q-Amp	0.642	1
RUNX1	Del_Xq21.33	0.642	1
SARNP	Amp_11q13.3	0.642	1
ZNF486	Amp_3q26.33	0.642	1
CASP8	GNA13	0.642	1
CASP8	TMCO4	0.642	1
CASP8	17q-Amp	0.642	1
CASP8	Del_1q32.1	0.642	1
CASP8	Del_Xq21.33	0.642	1
DCDC1	GNA13	0.642	1
EXOSC10	GNA13	0.642	1
EXOSC10	TMCO4	0.642	1
EXOSC10	Del_1q32.1	0.642	1
EXOSC10	Del_Xq21.33	0.642	1
FAT1	Del_4q34.2	0.642	1
IKZF2	17q-Amp	0.642	1
OR10Z1	Amp_11q13.3	0.642	1
THRAP3	17q-Amp	0.642	1
THRAP3	Del_1q32.1	0.642	1
WAC	Del_1q32.1	0.642	1
ZNF750	GNA13	0.642	1
ZNF750	Del_1q32.1	0.642	1
BAP1	TMCO4	0.642	1
BAP1	Del_1q32.1	0.642	1
CDH1	GNA13	0.642	1
CDH1	17q-Amp	0.642	1
CDH1	Del_1q32.1	0.642	1
CDH1	Del_Xq21.33	0.642	1
EPS8	17q-Amp	0.642	1
EPS8	Del_1q32.1	0.642	1
GNA13	1q-Amp	0.642	1
GNA13	Del_1p36.11	0.642	1
TMCO4	Del_1p36.11	0.642	1
17q-Amp	Del_1p36.11	0.642	1
1q-Amp	Del_1q32.1	0.642	1
20q-Amp	Del_4q34.2	0.642	1
8q-Amp	Del_9p23	0.642	1
Del_1p36.11	Del_1q32.1	0.642	1
KDM6A	TSC1	0.643	1
TSC1	FUT5	0.643	1
TSC1	ZNF185	0.643	1
Amp_8p11.21	Amp_11q13.3	0.643	1
Amp_8p11.21	Del_10q23.31	0.643	1
ARID1A	11q-Del	0.644	1
ASXL2	Del_4q34.2	0.644	1
BTG2	TP53	0.644	1
C12orf43	TP53	0.644	1
CDKN1A	Amp_5p15.33	0.644	1
RHOA	CDK12	0.644	1
SHANK1	14q-Del	0.644	1
SHANK1	4p-Del	0.644	1
TP53	CCNE2	0.644	1
TP53	SNRPB	0.644	1
TP53	19p-Del	0.644	1
5p-Amp	Del_22q13.32	0.644	1
9q-Del	Del_19p13.3	0.644	1
ASXL2	7p-Amp	0.645	1
HORMAD1	Amp_7p11.2	0.645	1
KDM6A	ZNF180	0.645	1
KLF5	Amp_17q12	0.645	1
NF2	SPTAN1	0.645	1
NF2	Amp_7p11.2	0.645	1
SHANK1	Amp_17q23.3	0.645	1
TP53	Del_14q24.1	0.645	1
STK32B	SPTAN1	0.645	1
ADC	Amp_20q11.21	0.645	1
CNOT3	SPTAN1	0.645	1
SPTAN1	ZNF773	0.645	1
ZNF773	Amp_7p11.2	0.645	1
Amp_1q23.3	Del_9p21.3	0.645	1
ATM	COPZ2	0.646	1
ATM	PTTG1IP	0.646	1
KLF5	Amp_10p14	0.646	1
PTTG1IP	Del_4q34.2	0.646	1
RB1	Del_12p13.1	0.646	1
HSP90AA1	Del_12p13.1	0.646	1
Amp_7p11.2	Del_18q23	0.646	1
BTG2	Del_18q23	0.647	1
C12orf43	KDM6A	0.647	1
C12orf43	Del_18q23	0.647	1
DIAPH2	ARID1B	0.647	1
ERBB2	Del_17p12	0.647	1
ERCC2	Amp_16p13.2	0.647	1
HORMAD1	NDC80	0.647	1
HORMAD1	Del_7q36.3	0.647	1
KDM6A	NHLRC1	0.647	1
KDM6A	SNRPB	0.647	1
KDM6A	TAF11	0.647	1
KDM6A	19p-Del	0.647	1
KLF5	SF3B3	0.647	1
NF2	RPTN	0.647	1
NF2	ZNF180	0.647	1
NF2	DDX3X	0.647	1
NF2	NAA15	0.647	1
NF2	19q-Amp	0.647	1
NF2	Amp_4q13.3	0.647	1
NHLRC1	8q-Amp	0.647	1
NHLRC1	Del_18q23	0.647	1
RPTN	ZBTB7B	0.647	1
RPTN	STK32B	0.647	1
RPTN	Amp_6q21	0.647	1
TGIF2LX	8q-Amp	0.647	1
TGIF2LX	Del_18q23	0.647	1
ZBTB7B	ZNF180	0.647	1
ZBTB7B	NAA15	0.647	1
ZBTB7B	19q-Amp	0.647	1
ZBTB7B	Amp_4q13.3	0.647	1
ZNF180	STK32B	0.647	1
ZNF180	CNOT3	0.647	1
ZNF180	Amp_6q21	0.647	1
CCNE2	8q-Amp	0.647	1
CPD	PARD3	0.647	1
CPD	ARID1B	0.647	1
CPD	4q-Del	0.647	1
DDX3X	PSMC6	0.647	1
DDX3X	STK32B	0.647	1
DDX3X	CNOT3	0.647	1
DENND5B	Amp_3p25.2	0.647	1
IL10RB	8q-Amp	0.647	1
LETMD1	Del_18q23	0.647	1
NDC80	PSMC6	0.647	1
NDC80	STK32B	0.647	1
NDC80	Amp_6q21	0.647	1
PARD3	RBM10	0.647	1
PARD3	SF3B3	0.647	1
PARD3	TRERF1	0.647	1
PARD3	FAM47C	0.647	1
PHLDA3	8q-Amp	0.647	1
PHLDA3	Del_18q23	0.647	1
PSMC6	Del_7q36.3	0.647	1
RARG	STK32B	0.647	1
RARG	ZNF773	0.647	1
RARG	Amp_6q21	0.647	1
RBM10	7p-Amp	0.647	1
RBM10	4q-Del	0.647	1
SF3B3	7p-Amp	0.647	1
SF3B3	4q-Del	0.647	1
STK32B	19q-Amp	0.647	1
CNOT1	7p-Amp	0.647	1
CNOT3	Amp_4q13.3	0.647	1
CNOT3	Del_7q36.3	0.647	1
SCARF2	8q-Amp	0.647	1
SPTAN1	Del_17p12	0.647	1
ZNF773	19q-Amp	0.647	1
ZNF773	Del_7q36.3	0.647	1
19q-Amp	Amp_6q21	0.647	1
20p-Amp	Amp_3q26.33	0.647	1
8q-Amp	19p-Del	0.647	1
9p-Del	Amp_13q22.1	0.647	1
CDKN1A	PIK3CA	0.648	1
CFHR4	Del_4q22.1	0.648	1
ERBB2	SF1	0.648	1
ERBB2	TFG	0.648	1
ERBB2	6q-Del	0.648	1
ERBB2	Del_15q13.1	0.648	1
ERCC2	Del_11q23.3	0.648	1
GPS2	Amp_19q12	0.648	1
MIPOL1	Amp_19q12	0.648	1
NF1	Del_9p23	0.648	1
ARID2	Del_4q34.2	0.648	1
DPYS	Del_4q22.1	0.648	1
6q-Del	Amp_19q12	0.648	1
DIAPH2	Amp_8p11.23	0.649	1
DIAPH2	Del_16p13.3	0.649	1
ERBB2	PIK3CA	0.649	1
FGFR3	CNOT1	0.649	1
RPTN	10q-Del	0.649	1
RPTN	6q-Del	0.649	1
RXRA	Del_2q22.1	0.649	1
STAG2	CNOT1	0.649	1
ZNF180	10q-Del	0.649	1
CPD	Del_16p13.3	0.649	1
DDX3X	10q-Del	0.649	1
DDX3X	6q-Del	0.649	1
MYO16	Del_2q22.1	0.649	1
MYO16	Del_13q14.2	0.649	1
NAA15	3q-Amp	0.649	1
NAA15	Del_15q13.1	0.649	1
RARG	3q-Amp	0.649	1
SF3B3	Amp_8p11.23	0.649	1
FAM47C	Amp_8p11.23	0.649	1
19q-Amp	10q-Del	0.649	1
19q-Amp	6q-Del	0.649	1
3q-Amp	Del_7q36.3	0.649	1
16p-Del	Amp_8p11.21	0.649	1
22q-Del	Amp_8p11.21	0.649	1
6q-Del	Amp_4q13.3	0.649	1
ARID1A	ATAD5	0.65	1
CREBBP	Del_16p13.3	0.65	1
GTF2I	NF1	0.65	1
MIPOL1	Amp_1q21.3	0.65	1
NF1	SSH3	0.65	1
NFE2L2	DENND5B	0.65	1
NFE2L2	7q-Amp	0.65	1
NFE2L2	15q-Del	0.65	1
PLCXD3	CDK12	0.65	1
PLCXD3	14q-Del	0.65	1
PSIP1	RXRA	0.65	1
PSIP1	SF3B1	0.65	1
PSIP1	16p-Del	0.65	1
PSIP1	22q-Del	0.65	1
RXRA	RBM26	0.65	1
RXRA	7q-Amp	0.65	1
SF1	Amp_1q21.3	0.65	1
SF3B1	DENND5B	0.65	1
STAG2	Del_6q27	0.65	1
TBC1D12	Amp_8p11.23	0.65	1
TP53	5q-Del	0.65	1
AGR3	4p-Del	0.65	1
ATAD5	Amp_5p15.33	0.65	1
CDK12	RBP2	0.65	1
DENND5B	MYO16	0.65	1
DENND5B	Amp_11q22.2	0.65	1
MED13	Amp_5p15.33	0.65	1
RBM26	16p-Del	0.65	1
RBM26	22q-Del	0.65	1
ADC	4p-Del	0.65	1
DAZAP1	4p-Del	0.65	1
7q-Amp	16p-Del	0.65	1
15q-Del	Amp_11q22.2	0.65	1
ATM	OR10Z1	0.651	1
ATM	FUS	0.651	1
ERBB3	DENND5B	0.651	1
ERBB3	15q-Del	0.651	1
IDH1	Del_4q34.2	0.651	1
KDM6A	ASXL1	0.651	1
FAT1	Del_18q23	0.651	1
PARD3	Del_2q34	0.651	1
SF3B3	Del_2q37.1	0.651	1
TRERF1	Del_2q37.1	0.651	1
CNOT1	Del_2q37.1	0.651	1
FAM47C	Del_2q37.1	0.651	1
FUS	Del_4q34.2	0.651	1
7p-Amp	Del_2q34	0.651	1
ASXL2	Del_2q37.1	0.652	1
DIAPH2	18q-Del	0.652	1
FBXW7	Amp_1q23.3	0.652	1
IDH1	RHOA	0.652	1
IDH1	SHANK1	0.652	1
METTL3	ZNF486	0.652	1
METTL3	UGP2	0.652	1
PKHD1	Amp_1q23.3	0.652	1
RHOA	SARNP	0.652	1
RHOA	ZNF486	0.652	1
RHOA	OR10Z1	0.652	1
RHOA	UGP2	0.652	1
RHOA	FUS	0.652	1
SHANK1	OR10Z1	0.652	1
SHANK1	UGP2	0.652	1
SHANK1	FUS	0.652	1
CPD	18q-Del	0.652	1
DLX6	10q-Del	0.652	1
DLX6	6q-Del	0.652	1
MED13	Amp_1q23.3	0.652	1
SF3B3	Del_14q24.1	0.652	1
CNOT1	18q-Del	0.652	1
CNOT1	Del_14q24.1	0.652	1
FAM47C	Del_14q24.1	0.652	1
FUT5	3q-Amp	0.652	1
FUT5	10q-Del	0.652	1
FUT5	6q-Del	0.652	1
FUT5	Del_15q13.1	0.652	1
SPTAN1	Amp_12q15	0.652	1
SPTAN1	Amp_13q22.1	0.652	1
SPTAN1	Del_6p25.3	0.652	1
SPTAN1	Del_16q23.1	0.652	1
ZNF185	3q-Amp	0.652	1
ZNF185	10q-Del	0.652	1
ZNF185	Del_15q13.1	0.652	1
6q-Del	Del_9p21.3	0.652	1
Amp_7p11.2	Del_6p25.3	0.652	1
CREBBP	ERBB2	0.653	1
EP300	FBXW7	0.653	1
EP300	Amp_16p13.2	0.653	1
ERBB3	Del_13q14.2	0.653	1
KLF5	NRAS	0.653	1
KLF5	GLTP	0.653	1
KLF5	UBA52	0.653	1
KLF5	ZBTB47	0.653	1
KLF5	UNC93B1	0.653	1
NF1	5p-Amp	0.653	1
NFE2L3	Amp_19q13.43	0.653	1
NRAS	PARD3	0.653	1
NRAS	ARID1B	0.653	1
NRAS	7p-Amp	0.653	1
NRAS	4q-Del	0.653	1
RUNX1	Amp_19q13.43	0.653	1
ATAD5	11p-Del	0.653	1
DCDC1	Amp_19q13.43	0.653	1
EPHA2	Amp_12q15	0.653	1
EPHA2	Del_6p25.3	0.653	1
GLTP	PARD3	0.653	1
GLTP	ARID1B	0.653	1
GLTP	7p-Amp	0.653	1
HFM1	Del_16q23.1	0.653	1
IKZF2	Amp_19q13.43	0.653	1
PARD3	UNC93B1	0.653	1
THRAP3	Amp_19q13.43	0.653	1
UBA52	7p-Amp	0.653	1
UBA52	4q-Del	0.653	1
WAC	Amp_19q13.43	0.653	1
ZBTB47	7p-Amp	0.653	1
ZBTB47	4q-Del	0.653	1
ARID1B	HLA-A	0.653	1
CDH1	Amp_19q13.43	0.653	1
EPS8	Amp_19q13.43	0.653	1
HLA-A	7p-Amp	0.653	1
OGDH	Del_16q23.1	0.653	1
UNC93B1	7p-Amp	0.653	1
Amp_4p16.3	Amp_13q22.1	0.653	1
Amp_19q12	Del_11q25	0.653	1
ELF3	Del_2q22.1	0.654	1
EP300	Amp_12q15	0.654	1
ERBB2	ACTB	0.654	1
ERBB2	ZNF626	0.654	1
ERBB2	3p-Amp	0.654	1
RB1	CDK12	0.654	1
SF3B1	Amp_19q13.43	0.654	1
ACTB	Amp_19q12	0.654	1
ITGA4	Del_2q34	0.654	1
TXNIP	Del_2q34	0.654	1
ZNF185	Del_17p12	0.654	1
11p-Del	Del_16q23.1	0.654	1
17p-Del	Del_16q23.1	0.654	1
BTG2	RBM26	0.655	1
BTG2	7q-Amp	0.655	1
C12orf43	DENND5B	0.655	1
C12orf43	RBM26	0.655	1
C12orf43	7q-Amp	0.655	1
HIST1H2AG	PSIP1	0.655	1
HIST1H2AG	DENND5B	0.655	1
HIST1H2AG	7q-Amp	0.655	1
HIST1H2AG	15q-Del	0.655	1
NFE2L2	Del_17p12	0.655	1
NHLRC1	RBM26	0.655	1
NHLRC1	7q-Amp	0.655	1
NHLRC1	15q-Del	0.655	1
PSIP1	IL10RB	0.655	1
PSIP1	LETMD1	0.655	1
PSIP1	PHLDA3	0.655	1
PSIP1	SNRPB	0.655	1
PSIP1	SCARF2	0.655	1
TGIF2LX	15q-Del	0.655	1
CCNE2	DENND5B	0.655	1
CCNE2	7q-Amp	0.655	1
DENND5B	IL10RB	0.655	1
DENND5B	PHLDA3	0.655	1
DENND5B	SNRPB	0.655	1
DENND5B	TAF11	0.655	1
LETMD1	RBM26	0.655	1
NCOA1	Amp_22q12.2	0.655	1
PHLDA3	15q-Del	0.655	1
RBM26	19p-Del	0.655	1
SNRPB	7q-Amp	0.655	1
SNRPB	15q-Del	0.655	1
ASXL1	Del_4q34.2	0.655	1
SCARF2	15q-Del	0.655	1
7q-Amp	19p-Del	0.655	1
17p-Del	Amp_8p11.21	0.655	1
Amp_4p16.3	Amp_22q12.2	0.655	1
Amp_17q23.3	Del_5q12.1	0.655	1
CNNM4	GTF2I	0.656	1
CNNM4	NEK11	0.656	1
CNNM4	PPARGC1A	0.656	1
CNNM4	SSH3	0.656	1
CNNM4	TXNIP	0.656	1
GPS2	PPARGC1A	0.656	1
GPS2	SSH3	0.656	1
GPS2	DNAH6	0.656	1
GTF2I	SF1	0.656	1
GTF2I	ZNF511	0.656	1
GTF2I	NKX2-2	0.656	1
HORMAD1	Amp_12q15	0.656	1
HORMAD1	Amp_13q22.1	0.656	1
HORMAD1	Del_16q23.1	0.656	1
MIPOL1	ITGA4	0.656	1
MIPOL1	SSH3	0.656	1
MIPOL1	TXNIP	0.656	1
NF2	Amp_13q22.1	0.656	1
NF2	Del_6p25.3	0.656	1
RB1	Amp_19q12	0.656	1
SF1	ITGA4	0.656	1
SF1	NEK11	0.656	1
SF1	PPARGC1A	0.656	1
SF1	SSH3	0.656	1
SF1	TXNIP	0.656	1
SF1	DNAH6	0.656	1
ZBTB7B	Amp_13q22.1	0.656	1
ZBTB7B	Del_6p25.3	0.656	1
ZBTB7B	Del_16q23.1	0.656	1
ZNF511	NEK11	0.656	1
ZNF511	SSH3	0.656	1
ZNF511	DNAH6	0.656	1
ITGA4	NKX2-2	0.656	1
NEK11	NKX2-2	0.656	1
NKX2-2	SSH3	0.656	1
NKX2-2	TXNIP	0.656	1
NKX2-2	DNAH6	0.656	1
PSMC6	Del_6p25.3	0.656	1
PSMC6	Del_16q23.1	0.656	1
STK32B	Amp_12q15	0.656	1
ZNF773	Amp_13q22.1	0.656	1
7p-Amp	Amp_1q21.3	0.656	1
Amp_6q21	Amp_12q15	0.656	1
Amp_6q21	Del_6p25.3	0.656	1
Amp_6q21	Del_16q23.1	0.656	1
ELF3	Del_2q37.1	0.657	1
ELF3	Del_8p21.3	0.657	1
PTEN	Amp_1q23.3	0.657	1
Amp_16p13.2	Del_2q22.1	0.657	1
ARID1A	14q-Del	0.658	1
ARID1A	Amp_1q23.3	0.658	1
CNNM4	CREBBP	0.658	1
CNNM4	Amp_6p22.3	0.658	1
CREBBP	ZNF511	0.658	1
GPS2	Del_6q27	0.658	1
GPS2	Del_11q25	0.658	1
MIPOL1	Amp_7p21.1	0.658	1
NRAS	Amp_10p14	0.658	1
PTTG1IP	Del_2q34	0.658	1
RPTN	Amp_11q13.3	0.658	1
SF1	Del_6q27	0.658	1
ZNF180	Del_10q23.31	0.658	1
DDX3X	Amp_11q13.3	0.658	1
DDX3X	Del_10q23.31	0.658	1
DENND5B	Del_11p15.5	0.658	1
EPHA2	Amp_20q11.21	0.658	1
GLTP	Amp_10p14	0.658	1
NAA15	Amp_3q26.33	0.658	1
NAA15	Amp_11q13.3	0.658	1
NCOA1	Amp_20q11.21	0.658	1
NKX2-2	Del_6q27	0.658	1
PARD3	Del_8p21.3	0.658	1
UBA52	Amp_10p14	0.658	1
OGDH	Amp_20q11.21	0.658	1
SPTAN1	Del_2q34	0.658	1
19q-Amp	Amp_11q13.3	0.658	1
7q-Amp	Del_11p15.5	0.658	1
4p-Del	Amp_5p15.33	0.658	1
4p-Del	Del_6p25.3	0.658	1
Amp_3q26.33	Del_7q36.3	0.658	1
Amp_4q13.3	Amp_11q13.3	0.658	1
Amp_11q13.3	Del_7q36.3	0.658	1
Amp_11q13.3	Del_8p23.3	0.658	1
PIK3CA	Del_8p21.3	0.659	1
5p-Amp	Amp_3p25.2	0.659	1
Amp_19q12	Del_9p21.3	0.659	1
ERBB2	Amp_1q23.3	0.66	1
DENND5B	Del_17p12	0.66	1
HFM1	17p-Del	0.66	1
KDM5A	11p-Del	0.66	1
ASXL2	CFHR4	0.661	1
ASXL2	MARK2	0.661	1
ASXL2	Del_8p21.3	0.661	1
CDKN2A	RHOA	0.661	1
CDKN2A	ADC	0.661	1
FBXW7	RHOB	0.661	1
FBXW7	DLX6	0.661	1
HIST1H3B	18q-Del	0.661	1
PKHD1	DLX6	0.661	1
PKHD1	ZNF185	0.661	1
PLCXD3	RHOB	0.661	1
RB1	3q-Amp	0.661	1
RHOB	SHANK1	0.661	1
RHOB	AGR3	0.661	1
RHOB	MED13	0.661	1
RHOB	RBP2	0.661	1
ATAD5	FUT5	0.661	1
DLX6	MED13	0.661	1
MARK2	Amp_17q12	0.661	1
MYO16	Amp_1q23.3	0.661	1
PPP4R1	Amp_17q12	0.661	1
USP28	Amp_17q12	0.661	1
FUT5	Amp_16p13.2	0.661	1
GNA13	Del_14q24.1	0.661	1
TMCO4	18q-Del	0.661	1
ZNF185	Amp_16p13.2	0.661	1
17q-Amp	18q-Del	0.661	1
18q-Del	Del_Xq21.33	0.661	1
9p-Del	Del_15q13.1	0.661	1
CDKN1A	KLF5	0.662	1
CDKN1A	7p-Amp	0.662	1
CDKN1A	4q-Del	0.662	1
FGFR3	4p-Del	0.662	1
KLF5	11q-Del	0.662	1
KLF5	Del_19p13.3	0.662	1
TP53	RBP2	0.662	1
TSC1	5q-Del	0.662	1
CDK12	Amp_8p11.23	0.662	1
PARD3	5q-Del	0.662	1
14q-Del	Amp_8p11.23	0.662	1
ASXL2	10q-Del	0.663	1
CFHR4	GNA13	0.663	1
CFHR4	TMCO4	0.663	1
CFHR4	17q-Amp	0.663	1
CFHR4	Del_1q32.1	0.663	1
CFHR4	Del_Xq21.33	0.663	1
COPZ2	20q-Amp	0.663	1
HIST1H3B	PROS1	0.663	1
HIST1H3B	PPP4R1	0.663	1
HIST1H3B	USP28	0.663	1
HIST1H3B	Del_Xp11.3	0.663	1
KPTN	20q-Amp	0.663	1
KPTN	Del_11q23.3	0.663	1
PROS1	GNA13	0.663	1
PROS1	17q-Amp	0.663	1
PROS1	Del_1q32.1	0.663	1
PROS1	Del_Xq21.33	0.663	1
PTTG1IP	20q-Amp	0.663	1
PTTG1IP	Del_11q23.3	0.663	1
CTCF	GNA13	0.663	1
CTCF	17q-Amp	0.663	1
CTCF	Del_1q32.1	0.663	1
DPYS	GNA13	0.663	1
DPYS	TMCO4	0.663	1
MARK2	GNA13	0.663	1
MARK2	Del_Xq21.33	0.663	1
MBD1	17q-Amp	0.663	1
MBD1	Del_1q32.1	0.663	1
MBD1	Del_Xq21.33	0.663	1
NDC80	Amp_3p25.2	0.663	1
PPARG	17q-Amp	0.663	1
PPP4R1	GNA13	0.663	1
PPP4R1	17q-Amp	0.663	1
PPP4R1	Del_1q32.1	0.663	1
PPP4R1	Del_Xq21.33	0.663	1
RARG	Amp_3p25.2	0.663	1
USP28	GNA13	0.663	1
USP28	Del_1q32.1	0.663	1
GNA13	Amp_10p14	0.663	1
17q-Amp	Del_Xp11.3	0.663	1
Del_Xp11.3	Del_Xq21.33	0.663	1
ERBB2	SF3B1	0.664	1
ERBB2	Amp_11q22.2	0.664	1
ERCC2	CDKN2AIPNL	0.664	1
FBXW7	RPTN	0.664	1
FBXW7	NAA15	0.664	1
FBXW7	Amp_4q13.3	0.664	1
FGFR3	Del_4q34.2	0.664	1
HORMAD1	Del_2q37.1	0.664	1
KDM6A	Del_6q27	0.664	1
NF2	Del_2q37.1	0.664	1
PIK3CA	RHOB	0.664	1
PKHD1	DDX3X	0.664	1
PKHD1	RARG	0.664	1
PKHD1	19q-Amp	0.664	1
RB1	Del_4q34.2	0.664	1
RHOA	Del_13q14.2	0.664	1
RPTN	Amp_16p13.2	0.664	1
ZNF180	Amp_16p13.2	0.664	1
ATAD5	DDX3X	0.664	1
MED13	NDC80	0.664	1
MED13	Del_7q36.3	0.664	1
NAA15	Amp_16p13.2	0.664	1
RARG	Amp_16p13.2	0.664	1
CNOT3	Del_2q37.1	0.664	1
DAZAP1	Amp_3p25.2	0.664	1
ZNF773	Del_2q37.1	0.664	1
5p-Amp	Del_4q34.2	0.664	1
Amp_4q13.3	Amp_16p13.2	0.664	1
Amp_6q21	Del_2q37.1	0.664	1
Amp_11q22.2	Amp_19q12	0.664	1
Amp_16p13.2	Del_7q36.3	0.664	1
CDKN1A	Amp_13q22.1	0.665	1
CDKN1A	Del_6p25.3	0.665	1
CDKN1A	Del_16q23.1	0.665	1
GTF2I	ARID2	0.665	1
KLF5	20q-Amp	0.665	1
NRAS	HSP90AA1	0.665	1
NRAS	Del_12p13.1	0.665	1
TP53	CDK12	0.665	1
ZFP36L1	TXNIP	0.665	1
ARID2	ITGA4	0.665	1
ARID2	NEK11	0.665	1
ARID2	PPARGC1A	0.665	1
ARID2	DNAH6	0.665	1
FAT1	7p-Amp	0.665	1
GLTP	HSP90AA1	0.665	1
GLTP	ASXL1	0.665	1
GLTP	Del_12p13.1	0.665	1
HSP90AA1	UBA52	0.665	1
SSH3	Amp_1p34.2	0.665	1
UBA52	8p-Del	0.665	1
UBA52	Del_12p13.1	0.665	1
ZBTB47	ASXL1	0.665	1
ZBTB47	Del_12p13.1	0.665	1
ARID1B	Del_11q23.3	0.665	1
ASXL1	UNC93B1	0.665	1
HLA-A	8p-Del	0.665	1
HLA-A	Del_12p13.1	0.665	1
11q-Del	Amp_13q22.1	0.665	1
4q-Del	Del_11q23.3	0.665	1
5q-Del	Amp_13q22.1	0.665	1
CREBBP	3q-Amp	0.666	1
CREBBP	Del_15q13.1	0.666	1
CSMD3	Del_5q12.1	0.666	1
EP300	Del_2q37.1	0.666	1
GTF2I	20q-Amp	0.666	1
MIPOL1	Amp_20q11.21	0.666	1
SF1	Amp_20q11.21	0.666	1
TBC1D12	Del_15q13.1	0.666	1
FAT1	ITGA4	0.666	1
FAT1	SSH3	0.666	1
FAT1	DNAH6	0.666	1
SSH3	20q-Amp	0.666	1
3q-Amp	Amp_7p21.1	0.666	1
10q-Del	Amp_7p21.1	0.666	1
C3orf70	Del_11q25	0.667	1
CREBBP	ACTB	0.667	1
CREBBP	RIPK4	0.667	1
CREBBP	ZNF626	0.667	1
CSMD3	FOXA1	0.667	1
CSMD3	GPR50	0.667	1
CSMD3	WAC	0.667	1
CTNNB1	HORMAD1	0.667	1
CTNNB1	NF2	0.667	1
CTNNB1	ZBTB7B	0.667	1
CTNNB1	STK32B	0.667	1
CTNNB1	ZNF773	0.667	1
CTNNB1	Amp_6q21	0.667	1
DIAPH2	HSP90AA1	0.667	1
ERCC2	SF3B3	0.667	1
ERCC2	Del_2q22.1	0.667	1
FOXA1	HORMAD1	0.667	1
FOXA1	NF2	0.667	1
FOXA1	TSC1	0.667	1
FOXA1	ZBTB7B	0.667	1
FOXA1	PSMC6	0.667	1
FOXA1	STK32B	0.667	1
FOXA1	ZNF773	0.667	1
FOXA1	Amp_6q21	0.667	1
FOXQ1	NF2	0.667	1
FOXQ1	STK32B	0.667	1
GPR50	HORMAD1	0.667	1
GPR50	ZBTB7B	0.667	1
GPR50	PSMC6	0.667	1
GPR50	Amp_6q21	0.667	1
HORMAD1	KRAS	0.667	1
HORMAD1	RUNX1	0.667	1
HORMAD1	CASP8	0.667	1
HORMAD1	DCDC1	0.667	1
HORMAD1	EXOSC10	0.667	1
HORMAD1	IKZF2	0.667	1
HORMAD1	ZNF750	0.667	1
HORMAD1	Del_1p36.11	0.667	1
HRAS	TBC1D12	0.667	1
HRAS	Del_11q25	0.667	1
KRAS	TSC1	0.667	1
KRAS	ZBTB7B	0.667	1
KRAS	PSMC6	0.667	1
KRAS	Amp_6q21	0.667	1
NF2	NFE2L3	0.667	1
NF2	PTEN	0.667	1
NF2	RUNX1	0.667	1
NF2	DCDC1	0.667	1
NF2	EXOSC10	0.667	1
NF2	IKZF2	0.667	1
NF2	WAC	0.667	1
NF2	1q-Amp	0.667	1
NF2	Del_1p36.11	0.667	1
NF2	Del_22q13.32	0.667	1
NFE2L3	STK32B	0.667	1
PTEN	TSC1	0.667	1
PTEN	STK32B	0.667	1
PTEN	CNOT3	0.667	1
PTEN	Amp_6q21	0.667	1
RUNX1	TSC1	0.667	1
RUNX1	ZBTB7B	0.667	1
RUNX1	PSMC6	0.667	1
RUNX1	ZNF773	0.667	1
TBC1D12	SLC9A4	0.667	1
TSC1	DCDC1	0.667	1
TSC1	EXOSC10	0.667	1
TSC1	IKZF2	0.667	1
TSC1	THRAP3	0.667	1
TSC1	WAC	0.667	1
TSC1	ZNF750	0.667	1
TSC1	1q-Amp	0.667	1
ZBTB7B	CASP8	0.667	1
ZBTB7B	EXOSC10	0.667	1
ZBTB7B	IKZF2	0.667	1
ZBTB7B	WAC	0.667	1
ZBTB7B	ZNF750	0.667	1
ZBTB7B	CDH1	0.667	1
ZBTB7B	1q-Amp	0.667	1
ZBTB7B	Del_1p36.11	0.667	1
ZFP36L2	Del_11q25	0.667	1
CPD	Del_12p13.1	0.667	1
DCDC1	CNOT3	0.667	1
DCDC1	ZNF773	0.667	1
DCDC1	Amp_6q21	0.667	1
EXOSC10	CNOT3	0.667	1
EXOSC10	ZNF773	0.667	1
HSP90AA1	CNOT1	0.667	1
IKZF2	ZNF773	0.667	1
IKZF2	Amp_6q21	0.667	1
NCOA1	Del_22q13.32	0.667	1
PSMC6	ZNF750	0.667	1
PSMC6	CDH1	0.667	1
PSMC6	Del_1p36.11	0.667	1
RIPK4	Del_11q25	0.667	1
SF3B3	ASXL1	0.667	1
STK32B	WAC	0.667	1
STK32B	1q-Amp	0.667	1
STK32B	20p-Amp	0.667	1
STK32B	Del_22q13.32	0.667	1
THRAP3	Amp_6q21	0.667	1
TRERF1	ASXL1	0.667	1
WAC	CNOT3	0.667	1
WAC	Amp_6q21	0.667	1
ZNF626	Del_11q25	0.667	1
BAP1	CNOT3	0.667	1
BAP1	ZNF773	0.667	1
CDH1	CNOT3	0.667	1
CDH1	Amp_6q21	0.667	1
CNOT3	EPS8	0.667	1
CNOT3	1q-Amp	0.667	1
CNOT3	20p-Amp	0.667	1
CNOT3	Del_1p36.11	0.667	1
CNOT3	Del_22q13.32	0.667	1
CUL1	Del_6q27	0.667	1
EPS8	Amp_6q21	0.667	1
ZNF773	20p-Amp	0.667	1
ZNF773	Del_1p36.11	0.667	1
1q-Amp	Amp_6q21	0.667	1
20p-Amp	Amp_4p16.3	0.667	1
20p-Amp	Amp_6q21	0.667	1
Amp_6q21	Del_1p36.11	0.667	1
ARID1A	PARD3	0.668	1
C3orf70	ZNF486	0.668	1
C3orf70	OR10Z1	0.668	1
C3orf70	UGP2	0.668	1
CNNM4	Amp_17q23.3	0.668	1
CTNNB1	Amp_1q21.3	0.668	1
ELF3	SF1	0.668	1
ELF3	ZNF511	0.668	1
ELF3	NKX2-2	0.668	1
GPS2	Amp_17q23.3	0.668	1
GPS2	Del_3p14.2	0.668	1
HRAS	IDH1	0.668	1
HRAS	PIGS	0.668	1
HRAS	SARNP	0.668	1
HRAS	ZNF486	0.668	1
HRAS	OR10Z1	0.668	1
HRAS	UGP2	0.668	1
HRAS	FUS	0.668	1
IDH1	ACTB	0.668	1
IDH1	RIPK4	0.668	1
IDH1	ZNF626	0.668	1
IDH1	CUL1	0.668	1
IDH1	3p-Amp	0.668	1
NF1	20q-Amp	0.668	1
PIGS	ACTB	0.668	1
PIGS	SLC9A4	0.668	1
PIGS	ZNF626	0.668	1
PIGS	CUL1	0.668	1
PIGS	3p-Amp	0.668	1
PKHD1	8q-Amp	0.668	1
POTEG	ZFP36L2	0.668	1
POTEG	ACTB	0.668	1
POTEG	RIPK4	0.668	1
POTEG	CUL1	0.668	1
POTEG	3p-Amp	0.668	1
SARNP	ACTB	0.668	1
SARNP	3p-Amp	0.668	1
SF1	Amp_17q23.3	0.668	1
SF1	Del_3p14.2	0.668	1
ZFP36L2	ZNF486	0.668	1
ZFP36L2	UGP2	0.668	1
ZFP36L2	FUS	0.668	1
ZNF486	ACTB	0.668	1
ZNF486	SLC9A4	0.668	1
ZNF486	CUL1	0.668	1
ZNF511	Amp_17q23.3	0.668	1
ACTB	OR10Z1	0.668	1
NKX2-2	Del_3p14.2	0.668	1
OR10Z1	RIPK4	0.668	1
OR10Z1	SLC9A4	0.668	1
OR10Z1	CUL1	0.668	1
OR10Z1	3p-Amp	0.668	1
RIPK4	FUS	0.668	1
SLC9A4	UGP2	0.668	1
SLC9A4	FUS	0.668	1
TFG	Del_3p14.2	0.668	1
UGP2	ZNF626	0.668	1
ZNF750	Amp_1q21.3	0.668	1
FUS	3p-Amp	0.668	1
8q-Amp	Amp_16p13.2	0.668	1
4q-Del	Amp_5p15.33	0.668	1
COPZ2	Del_2q22.1	0.669	1
GTF2I	Del_17p12	0.669	1
KLF5	PSIP1	0.669	1
KPTN	Amp_8p11.21	0.669	1
KPTN	Del_2q22.1	0.669	1
PSIP1	PARD3	0.669	1
PSIP1	4q-Del	0.669	1
PTTG1IP	Del_2q22.1	0.669	1
RHOB	SPTAN1	0.669	1
DENND5B	ARID1B	0.669	1
DENND5B	7p-Amp	0.669	1
DENND5B	4q-Del	0.669	1
NEK11	Del_17p12	0.669	1
RBM26	7p-Amp	0.669	1
RBM26	4q-Del	0.669	1
UBA52	Del_8p21.3	0.669	1
ZBTB47	Del_8p21.3	0.669	1
ARID1B	7q-Amp	0.669	1
ARID1B	15q-Del	0.669	1
DNAH6	Del_17p12	0.669	1
UNC93B1	Del_8p21.3	0.669	1
Amp_19q13.43	Del_9p21.3	0.669	1
ATM	RARG	0.67	1
ATM	Amp_4q13.3	0.67	1
BTG2	HFM1	0.67	1
C12orf43	HFM1	0.67	1
C12orf43	KDM5A	0.67	1
C12orf43	Amp_4p16.3	0.67	1
HIST1H2AG	EPHA2	0.67	1
HIST1H2AG	HFM1	0.67	1
HIST1H2AG	NCOA1	0.67	1
HIST1H2AG	OGDH	0.67	1
HIST1H2AG	Amp_4p16.3	0.67	1
HRAS	4p-Del	0.67	1
NF1	DLX6	0.67	1
NF1	FUT5	0.67	1
NHLRC1	EPHA2	0.67	1
NHLRC1	HFM1	0.67	1
NHLRC1	KDM5A	0.67	1
NHLRC1	NCOA1	0.67	1
NHLRC1	OGDH	0.67	1
NHLRC1	Amp_4p16.3	0.67	1
TGIF2LX	EPHA2	0.67	1
TGIF2LX	OGDH	0.67	1
TGIF2LX	Amp_4p16.3	0.67	1
ZFP36L2	CDK12	0.67	1
ZFP36L2	4p-Del	0.67	1
CCNE2	Amp_4p16.3	0.67	1
CDK12	CUL1	0.67	1
EPHA2	IL10RB	0.67	1
EPHA2	PHLDA3	0.67	1
EPHA2	SNRPB	0.67	1
EPHA2	TAF11	0.67	1
HFM1	LETMD1	0.67	1
HFM1	PHLDA3	0.67	1
HFM1	SNRPB	0.67	1
HFM1	SCARF2	0.67	1
HFM1	19p-Del	0.67	1
IL10RB	OGDH	0.67	1
IL10RB	Amp_4p16.3	0.67	1
KDM5A	LETMD1	0.67	1
KDM5A	PHLDA3	0.67	1
KDM5A	SNRPB	0.67	1
LETMD1	OGDH	0.67	1
LETMD1	Amp_4p16.3	0.67	1
NCOA1	PHLDA3	0.67	1
NCOA1	SCARF2	0.67	1
NDC80	Del_4q34.2	0.67	1
PHLDA3	OGDH	0.67	1
PHLDA3	Amp_4p16.3	0.67	1
RIPK4	14q-Del	0.67	1
RIPK4	4p-Del	0.67	1
SLC9A4	14q-Del	0.67	1
SLC9A4	4p-Del	0.67	1
SNRPB	Amp_4p16.3	0.67	1
TAF11	OGDH	0.67	1
TAF11	Amp_4p16.3	0.67	1
OGDH	19p-Del	0.67	1
SCARF2	Amp_4p16.3	0.67	1
3p-Amp	14q-Del	0.67	1
11q-Del	Del_4q34.2	0.67	1
19p-Del	Amp_4p16.3	0.67	1
CFHR4	EP300	0.671	1
CFHR4	Del_9p23	0.671	1
EP300	MARK2	0.671	1
EP300	PPARG	0.671	1
EP300	PPP4R1	0.671	1
PLCXD3	Del_11p15.5	0.671	1
CTCF	Del_9p23	0.671	1
MARK2	11p-Del	0.671	1
MARK2	Del_9p23	0.671	1
MBD1	Del_9p23	0.671	1
RBP2	Del_11p15.5	0.671	1
DAZAP1	Del_11p15.5	0.671	1
7p-Amp	9q-Del	0.671	1
11p-Del	Del_Xp11.3	0.671	1
BTG2	CSMD3	0.672	1
C12orf43	CSMD3	0.672	1
CSMD3	NHLRC1	0.672	1
CSMD3	PSIP1	0.672	1
CSMD3	TGIF2LX	0.672	1
CSMD3	IL10RB	0.672	1
CSMD3	SCARF2	0.672	1
CSMD3	19p-Del	0.672	1
ERBB3	Amp_3q26.33	0.672	1
METTL3	SPTAN1	0.672	1
NF1	Del_8p23.3	0.672	1
NFE2L2	TSC1	0.672	1
RHOA	SPTAN1	0.672	1
SHANK1	Amp_7p11.2	0.672	1
TSC1	MYO16	0.672	1
ZNF180	Del_11p15.5	0.672	1
GLTP	Del_5q12.1	0.672	1
KDM5A	8q-Amp	0.672	1
RARG	Del_11p15.5	0.672	1
RBP2	Amp_22q12.2	0.672	1
UBA52	Del_5q12.1	0.672	1
ZBTB47	9q-Del	0.672	1
ADC	Amp_22q12.2	0.672	1
ASXL1	Amp_17q12	0.672	1
DAZAP1	Amp_22q12.2	0.672	1
17q-Amp	8p-Del	0.672	1
Amp_13q22.1	Del_18q23	0.672	1
Amp_17q12	Del_12p13.1	0.672	1
Del_7q36.3	Del_11p15.5	0.672	1
ERCC2	TMCO4	0.673	1
NFE2L2	HFM1	0.673	1
POTEG	Del_9p23	0.673	1
RXRA	NCOA1	0.673	1
SARNP	Del_9p23	0.673	1
SF3B1	EPHA2	0.673	1
SF3B1	HFM1	0.673	1
ZFP36L2	Del_9p23	0.673	1
EPHA2	22q-Del	0.673	1
HFM1	22q-Del	0.673	1
HFM1	Amp_11q22.2	0.673	1
MYO16	OGDH	0.673	1
NCOA1	22q-Del	0.673	1
OR10Z1	Del_9p23	0.673	1
RIPK4	Del_9p23	0.673	1
UGP2	Del_9p23	0.673	1
ZNF626	Amp_10p14	0.673	1
CUL1	Del_9p23	0.673	1
FUS	Del_9p23	0.673	1
OGDH	16p-Del	0.673	1
OGDH	22q-Del	0.673	1
OGDH	Amp_11q22.2	0.673	1
Amp_4p16.3	Amp_11q22.2	0.673	1
Del_4q22.1	Del_11q23.3	0.673	1
CDKN1A	PROS1	0.674	1
CDKN1A	MARK2	0.674	1
CDKN1A	MBD1	0.674	1
CDKN1A	PPP4R1	0.674	1
CDKN1A	USP28	0.674	1
CNNM4	ZNF180	0.674	1
CNNM4	NDC80	0.674	1
CNNM4	RARG	0.674	1
CNNM4	Del_7q36.3	0.674	1
CREBBP	TBC1D12	0.674	1
GPS2	RPTN	0.674	1
GPS2	NDC80	0.674	1
GPS2	RARG	0.674	1
GPS2	19q-Amp	0.674	1
GPS2	Amp_4q13.3	0.674	1
GPS2	Del_7q36.3	0.674	1
KDM6A	Del_10q23.31	0.674	1
MIPOL1	DDX3X	0.674	1
MIPOL1	NDC80	0.674	1
MIPOL1	19q-Amp	0.674	1
MIPOL1	Del_7q36.3	0.674	1
PROS1	11q-Del	0.674	1
RPTN	SF1	0.674	1
RPTN	ZNF511	0.674	1
SF1	ZNF180	0.674	1
SF1	DDX3X	0.674	1
SF1	NDC80	0.674	1
SF1	Amp_4q13.3	0.674	1
SF1	Del_7q36.3	0.674	1
TBC1D12	Del_6q27	0.674	1
ZNF180	NKX2-2	0.674	1
ZNF511	NAA15	0.674	1
ZNF511	RARG	0.674	1
ZNF511	19q-Amp	0.674	1
ZNF511	Amp_4q13.3	0.674	1
ZNF511	Del_7q36.3	0.674	1
CTCF	5q-Del	0.674	1
MARK2	5q-Del	0.674	1
MBD1	Del_19p13.3	0.674	1
NDC80	NKX2-2	0.674	1
NDC80	TFG	0.674	1
NKX2-2	RARG	0.674	1
NKX2-2	Amp_4q13.3	0.674	1
NKX2-2	Del_7q36.3	0.674	1
PPARG	5q-Del	0.674	1
PPARG	Del_19p13.3	0.674	1
PPP4R1	Del_19p13.3	0.674	1
TFG	Del_7q36.3	0.674	1
SPTAN1	20p-Amp	0.674	1
11q-Del	Del_Xp11.3	0.674	1
5q-Del	Del_Xp11.3	0.674	1
9q-Del	Amp_19q13.43	0.674	1
Amp_17q23.3	Del_16p13.3	0.674	1
Del_19p13.3	Del_Xp11.3	0.674	1
DIAPH2	Amp_11q13.3	0.675	1
ERBB2	KPTN	0.675	1
ERBB2	PKHD1	0.675	1
ERBB2	PTTG1IP	0.675	1
ERBB2	Del_3p14.2	0.675	1
MIPOL1	Del_8p21.3	0.675	1
PTTG1IP	Amp_19q12	0.675	1
CPD	Amp_3q26.33	0.675	1
MYO16	Amp_3p25.2	0.675	1
NKX2-2	Del_8p21.3	0.675	1
SF3B3	Amp_3q26.33	0.675	1
TFG	Del_8p21.3	0.675	1
FAM47C	Amp_3q26.33	0.675	1
ZFP36L2	Amp_1q23.3	0.676	1
RBM10	Del_9p23	0.676	1
SF3B3	Del_9p23	0.676	1
9p-Del	Del_22q13.32	0.676	1
Amp_1q23.3	Del_2q34	0.676	1
FOXQ1	Amp_6p22.3	0.677	1
KDM6A	Del_6p25.3	0.677	1
ZNF750	Amp_6p22.3	0.677	1
EPS8	Amp_6p22.3	0.677	1
20q-Amp	Amp_6p22.3	0.677	1
5p-Amp	11q-Del	0.677	1
Amp_6p22.3	Del_1p36.11	0.677	1
CTNNB1	Amp_8p11.23	0.678	1
DIAPH2	NRAS	0.678	1
ERBB3	HORMAD1	0.678	1
ERBB3	STK32B	0.678	1
ERBB3	CNOT3	0.678	1
FGFR3	GPR50	0.678	1
FGFR3	EXOSC10	0.678	1
FGFR3	THRAP3	0.678	1
FGFR3	WAC	0.678	1
FGFR3	BAP1	0.678	1
FOXQ1	STAG2	0.678	1
FOXQ1	Del_16p13.3	0.678	1
GPR50	STAG2	0.678	1
GPR50	Amp_8p11.23	0.678	1
GPR50	Del_16p13.3	0.678	1
IDH1	FAT1	0.678	1
IDH1	Del_11q23.3	0.678	1
KRAS	STAG2	0.678	1
KRAS	Amp_8p11.23	0.678	1
NFE2L3	STAG2	0.678	1
NRAS	CPD	0.678	1
NRAS	RBM10	0.678	1
NRAS	SF3B3	0.678	1
NRAS	TRERF1	0.678	1
NRAS	FAM47C	0.678	1
PIGS	20q-Amp	0.678	1
POTEG	FAT1	0.678	1
PTEN	STAG2	0.678	1
PTEN	Amp_8p11.23	0.678	1
SARNP	20q-Amp	0.678	1
STAG2	CASP8	0.678	1
STAG2	DCDC1	0.678	1
STAG2	EXOSC10	0.678	1
STAG2	THRAP3	0.678	1
STAG2	WAC	0.678	1
STAG2	EPS8	0.678	1
ZFP36L1	4p-Del	0.678	1
ZNF486	Del_11q23.3	0.678	1
ARID2	CDK12	0.678	1
ARID2	Del_11p15.5	0.678	1
CDK12	Amp_1p34.2	0.678	1
CPD	GLTP	0.678	1
DCDC1	Del_16p13.3	0.678	1
FAT1	FUS	0.678	1
GLTP	RBM10	0.678	1
GLTP	SF3B3	0.678	1
GLTP	TRERF1	0.678	1
GLTP	CNOT1	0.678	1
GLTP	FAM47C	0.678	1
IKZF2	Del_16p13.3	0.678	1
PPARGC1A	Amp_8p11.21	0.678	1
RBM10	ZBTB47	0.678	1
RBM10	UNC93B1	0.678	1
SF3B3	UNC93B1	0.678	1
TRERF1	ZBTB47	0.678	1
TRERF1	HLA-A	0.678	1
TRERF1	UNC93B1	0.678	1
UGP2	Del_11q23.3	0.678	1
ZBTB47	CNOT1	0.678	1
ZBTB47	FAM47C	0.678	1
ZNF750	Amp_8p11.23	0.678	1
BAP1	Amp_8p11.23	0.678	1
CNOT1	HLA-A	0.678	1
CNOT1	UNC93B1	0.678	1
DNAH6	Amp_8p11.21	0.678	1
EPS8	Del_16p13.3	0.678	1
FAM47C	HLA-A	0.678	1
FUS	Del_11q23.3	0.678	1
SPTAN1	Del_11q23.3	0.678	1
1q-Amp	Amp_8p11.23	0.678	1
Amp_1p34.2	Del_11p15.5	0.678	1
Amp_8p11.23	Del_1p36.11	0.678	1
Amp_12q15	Del_9p21.3	0.678	1
ASXL2	CDKN2AIPNL	0.679	1
C3orf70	Del_3p14.2	0.679	1
CREBBP	22q-Del	0.679	1
CREBBP	Amp_11q22.2	0.679	1
ELF3	RIPK4	0.679	1
ELF3	CUL1	0.679	1
ELF3	3p-Amp	0.679	1
HRAS	Del_3p14.2	0.679	1
KDM6A	CNOT3	0.679	1
NF1	NDC80	0.679	1
NF1	RARG	0.679	1
NFE2L2	Del_11q25	0.679	1
RHOA	Amp_22q12.2	0.679	1
SF3B1	TBC1D12	0.679	1
SF3B1	Amp_7p21.1	0.679	1
SF3B1	Del_6q27	0.679	1
TBC1D12	MYO16	0.679	1
ZFP36L2	Amp_17q23.3	0.679	1
CDKN2AIPNL	Amp_17q12	0.679	1
MYO16	Amp_7p21.1	0.679	1
PARD3	Amp_8p11.21	0.679	1
PARD3	Amp_19q13.43	0.679	1
RIPK4	Amp_17q23.3	0.679	1
SLC9A4	Amp_17q23.3	0.679	1
UBA52	Del_13q14.2	0.679	1
ZBTB47	Del_13q14.2	0.679	1
ARID1B	Amp_8p11.21	0.679	1
CUL1	Amp_17q23.3	0.679	1
3p-Amp	Del_3p14.2	0.679	1
5p-Amp	Del_11p15.5	0.679	1
7p-Amp	Amp_19q13.43	0.679	1
7p-Amp	Del_2q22.1	0.679	1
11p-Del	Amp_8q22.3	0.679	1
16p-Del	Amp_7p21.1	0.679	1
22q-Del	Amp_7p21.1	0.679	1
4q-Del	Amp_8p11.21	0.679	1
4q-Del	Amp_19q13.43	0.679	1
ARID1A	HFM1	0.68	1
ARID1A	OGDH	0.68	1
BTG2	Amp_8p11.23	0.68	1
C12orf43	FGFR3	0.68	1
EP300	20p-Amp	0.68	1
EP300	Amp_5p15.33	0.68	1
EP300	Amp_19q12	0.68	1
EP300	Del_22q13.32	0.68	1
FGFR3	HIST1H2AG	0.68	1
FGFR3	NHLRC1	0.68	1
FGFR3	TGIF2LX	0.68	1
FGFR3	PHLDA3	0.68	1
FGFR3	SNRPB	0.68	1
HIST1H2AG	Del_16p13.3	0.68	1
KLF5	Amp_20q11.21	0.68	1
STAG2	TGIF2LX	0.68	1
STAG2	CCNE2	0.68	1
STAG2	PHLDA3	0.68	1
STAG2	SNRPB	0.68	1
STAG2	SCARF2	0.68	1
ZFP36L1	DLX6	0.68	1
ZFP36L1	FUT5	0.68	1
ZFP36L1	Del_2q34	0.68	1
ARID2	DLX6	0.68	1
ARID2	FUT5	0.68	1
ARID2	ZNF185	0.68	1
DLX6	Amp_1p34.2	0.68	1
IL10RB	Amp_8p11.23	0.68	1
PHLDA3	Amp_8p11.23	0.68	1
TAF11	Amp_8p11.23	0.68	1
TAF11	Del_16p13.3	0.68	1
SCARF2	Amp_8p11.23	0.68	1
SCARF2	Del_16p13.3	0.68	1
17p-Del	Amp_5p15.33	0.68	1
Amp_1q23.3	Amp_7p11.2	0.68	1
ASXL2	17p-Del	0.681	1
COPZ2	Amp_7p21.1	0.681	1
CREBBP	KPTN	0.681	1
CREBBP	Del_14q24.1	0.681	1
CTNNB1	3q-Amp	0.681	1
CTNNB1	6q-Del	0.681	1
EP300	Amp_17q12	0.681	1
ERBB3	KDM5A	0.681	1
ERBB3	NCOA1	0.681	1
ERBB3	OGDH	0.681	1
FOXA1	3q-Amp	0.681	1
GPR50	10q-Del	0.681	1
GPR50	6q-Del	0.681	1
GPR50	Del_15q13.1	0.681	1
KPTN	TBC1D12	0.681	1
KPTN	Amp_7p21.1	0.681	1
KPTN	Del_11q25	0.681	1
KRAS	3q-Amp	0.681	1
KRAS	10q-Del	0.681	1
PROS1	Del_18q23	0.681	1
PSIP1	18q-Del	0.681	1
PTTG1IP	Amp_7p21.1	0.681	1
PTTG1IP	Del_6q27	0.681	1
PTTG1IP	Del_11q25	0.681	1
RUNX1	10q-Del	0.681	1
TBC1D12	18q-Del	0.681	1
TP53	TRERF1	0.681	1
CASP8	3q-Amp	0.681	1
CASP8	6q-Del	0.681	1
CASP8	Del_15q13.1	0.681	1
DCDC1	3q-Amp	0.681	1
DCDC1	6q-Del	0.681	1
DENND5B	18q-Del	0.681	1
EXOSC10	6q-Del	0.681	1
IKZF2	3q-Amp	0.681	1
IKZF2	10q-Del	0.681	1
MBD1	8q-Amp	0.681	1
PPARG	8q-Amp	0.681	1
PPP4R1	8q-Amp	0.681	1
RBM26	Del_14q24.1	0.681	1
THRAP3	3q-Amp	0.681	1
THRAP3	10q-Del	0.681	1
THRAP3	6q-Del	0.681	1
USP28	Del_18q23	0.681	1
ZNF750	3q-Amp	0.681	1
CDH1	10q-Del	0.681	1
EPS8	3q-Amp	0.681	1
17q-Amp	Del_5q12.1	0.681	1
1q-Amp	3q-Amp	0.681	1
1q-Amp	Del_15q13.1	0.681	1
3q-Amp	Del_1p36.11	0.681	1
Del_1q32.1	Del_5q12.1	0.681	1
ZFP36L1	Del_8p21.3	0.682	1
GNA13	Del_17p12	0.682	1
Amp_1p34.2	Del_8p21.3	0.682	1
Amp_12q15	Del_2q34	0.682	1
C3orf70	8p-Del	0.683	1
CDKN1A	10q-Del	0.683	1
DIAPH2	Del_4q22.1	0.683	1
ELF3	6q-Del	0.683	1
EP300	NF1	0.683	1
NFE2L2	PLCXD3	0.683	1
NFE2L2	AGR3	0.683	1
NFE2L2	RBP2	0.683	1
NFE2L2	ADC	0.683	1
NFE2L2	DAZAP1	0.683	1
PLCXD3	RXRA	0.683	1
PLCXD3	SF3B1	0.683	1
PLCXD3	MYO16	0.683	1
PLCXD3	22q-Del	0.683	1
PLCXD3	Amp_11q22.2	0.683	1
RB1	Amp_7p21.1	0.683	1
RXRA	AGR3	0.683	1
RXRA	RBP2	0.683	1
RXRA	ADC	0.683	1
RXRA	DAZAP1	0.683	1
SF3B1	AGR3	0.683	1
SF3B1	RBP2	0.683	1
SF3B1	ADC	0.683	1
ACTB	8p-Del	0.683	1
AGR3	16p-Del	0.683	1
MYO16	ADC	0.683	1
MYO16	DAZAP1	0.683	1
RBP2	16p-Del	0.683	1
RBP2	22q-Del	0.683	1
RBP2	Amp_11q22.2	0.683	1
ADC	16p-Del	0.683	1
ASXL1	Del_2q34	0.683	1
DAZAP1	16p-Del	0.683	1
DAZAP1	22q-Del	0.683	1
DAZAP1	Amp_11q22.2	0.683	1
10q-Del	Amp_17q23.3	0.683	1
Amp_10p14	Del_12p13.1	0.683	1
ATM	Del_11p15.5	0.684	1
BTG2	RHOA	0.684	1
C12orf43	RHOA	0.684	1
CSMD3	Amp_5p15.33	0.684	1
FGFR3	DENND5B	0.684	1
KDM6A	11p-Del	0.684	1
KDM6A	6q-Del	0.684	1
METTL3	IL10RB	0.684	1
METTL3	PHLDA3	0.684	1
METTL3	SNRPB	0.684	1
METTL3	TAF11	0.684	1
METTL3	19p-Del	0.684	1
NHLRC1	RHOA	0.684	1
NHLRC1	SHANK1	0.684	1
PSIP1	Del_16p13.3	0.684	1
RHOA	TGIF2LX	0.684	1
RHOA	CCNE2	0.684	1
RHOA	IL10RB	0.684	1
RHOA	LETMD1	0.684	1
RHOA	19p-Del	0.684	1
SHANK1	IL10RB	0.684	1
SHANK1	PHLDA3	0.684	1
SHANK1	SNRPB	0.684	1
SHANK1	TAF11	0.684	1
PPARG	Del_8p21.3	0.684	1
PPP4R1	Del_8p21.3	0.684	1
RBM26	Del_16p13.3	0.684	1
USP28	Del_8p21.3	0.684	1
20p-Amp	11q-Del	0.684	1
7p-Amp	Del_13q14.2	0.684	1
7q-Amp	Del_16p13.3	0.684	1
Del_8p21.3	Del_Xp11.3	0.684	1
GTF2I	POTEG	0.685	1
GTF2I	UGP2	0.685	1
HIST1H3B	17q-Amp	0.685	1
HIST1H3B	Del_1q32.1	0.685	1
HIST1H3B	Del_Xq21.33	0.685	1
IDH1	ITGA4	0.685	1
IDH1	SSH3	0.685	1
IDH1	TXNIP	0.685	1
METTL3	Amp_13q22.1	0.685	1
PIGS	ITGA4	0.685	1
PIGS	TXNIP	0.685	1
POTEG	TXNIP	0.685	1
POTEG	DNAH6	0.685	1
RHOB	Del_16q23.1	0.685	1
SHANK1	Amp_12q15	0.685	1
SHANK1	Amp_13q22.1	0.685	1
ZNF486	NEK11	0.685	1
ZNF486	PPARGC1A	0.685	1
ZNF486	SSH3	0.685	1
ZNF486	DNAH6	0.685	1
NEK11	OR10Z1	0.685	1
NEK11	UGP2	0.685	1
NEK11	FUS	0.685	1
NEK11	9p-Del	0.685	1
OR10Z1	PPARGC1A	0.685	1
OR10Z1	SSH3	0.685	1
PPARGC1A	UGP2	0.685	1
SSH3	UGP2	0.685	1
SSH3	FUS	0.685	1
TXNIP	UGP2	0.685	1
TXNIP	FUS	0.685	1
UGP2	DNAH6	0.685	1
GNA13	17q-Amp	0.685	1
GNA13	Del_1q32.1	0.685	1
GNA13	Del_4q22.1	0.685	1
TMCO4	17q-Amp	0.685	1
TMCO4	Del_1q32.1	0.685	1
17q-Amp	Del_4q22.1	0.685	1
Amp_3q26.33	Amp_11q13.3	0.685	1
Amp_17q12	Del_9p21.3	0.685	1
Del_1q32.1	Del_Xq21.33	0.685	1
ARID1A	LETMD1	0.686	1
ARID1A	TAF11	0.686	1
ASXL2	FBXW7	0.686	1
BTG2	Amp_5p15.33	0.686	1
CSMD3	3q-Amp	0.686	1
DIAPH2	RB1	0.686	1
FGFR3	Del_14q24.1	0.686	1
FOXA1	Amp_20q11.21	0.686	1
NFE2L3	Amp_20q11.21	0.686	1
RB1	FAM47C	0.686	1
RUNX1	Amp_20q11.21	0.686	1
ARID2	Del_9p23	0.686	1
CCNE2	Amp_5p15.33	0.686	1
EXOSC10	Amp_20q11.21	0.686	1
IKZF2	Amp_20q11.21	0.686	1
PHLDA3	Amp_5p15.33	0.686	1
UBA52	Del_8p23.3	0.686	1
SCARF2	Amp_5p15.33	0.686	1
UNC93B1	Del_8p23.3	0.686	1
Amp_8p11.23	Del_14q24.1	0.686	1
Amp_20q11.21	Del_1p36.11	0.686	1
CDKN2A	HRAS	0.687	1
CDKN2A	ZFP36L2	0.687	1
CDKN2A	SLC9A4	0.687	1
CFHR4	CNOT3	0.687	1
CFHR4	Amp_19q13.43	0.687	1
COPZ2	ELF3	0.687	1
COPZ2	Amp_17q23.3	0.687	1
ELF3	KPTN	0.687	1
HORMAD1	PROS1	0.687	1
HORMAD1	DPYS	0.687	1
HORMAD1	MARK2	0.687	1
HORMAD1	PPARG	0.687	1
HORMAD1	USP28	0.687	1
HORMAD1	Del_Xp11.3	0.687	1
KPTN	Del_3p14.2	0.687	1
NF2	MARK2	0.687	1
NF2	MBD1	0.687	1
NF2	PPARG	0.687	1
NF2	PPP4R1	0.687	1
NF2	USP28	0.687	1
NF2	Del_Xp11.3	0.687	1
PIGS	Amp_8p11.21	0.687	1
PIK3CA	POTEG	0.687	1
PIK3CA	DPYS	0.687	1
PIK3CA	MARK2	0.687	1
PIK3CA	OR10Z1	0.687	1
POTEG	Del_2q22.1	0.687	1
PROS1	ZBTB7B	0.687	1
PROS1	PSMC6	0.687	1
PTTG1IP	Amp_17q23.3	0.687	1
PTTG1IP	Del_3p14.2	0.687	1
RHOB	SLC9A4	0.687	1
RHOB	CUL1	0.687	1
SF3B1	Amp_8q22.3	0.687	1
SF3B1	Del_11p15.5	0.687	1
ZBTB7B	CTCF	0.687	1
ZBTB7B	DPYS	0.687	1
ZBTB7B	MARK2	0.687	1
ZBTB7B	PPARG	0.687	1
ZBTB7B	PPP4R1	0.687	1
ZBTB7B	USP28	0.687	1
ZNF486	Del_2q22.1	0.687	1
CDKN2AIPNL	11q-Del	0.687	1
CDKN2AIPNL	5q-Del	0.687	1
CTCF	Amp_6q21	0.687	1
CTCF	Amp_19q13.43	0.687	1
DLX6	Del_9p23	0.687	1
DPYS	PSMC6	0.687	1
DPYS	STK32B	0.687	1
DPYS	CNOT3	0.687	1
DPYS	ZNF773	0.687	1
DPYS	Amp_6q21	0.687	1
GLTP	5p-Amp	0.687	1
MARK2	PSMC6	0.687	1
MARK2	STK32B	0.687	1
MARK2	Amp_6q21	0.687	1
MARK2	Amp_19q13.43	0.687	1
MBD1	PSMC6	0.687	1
MBD1	STK32B	0.687	1
MBD1	CNOT3	0.687	1
MBD1	ZNF773	0.687	1
MBD1	Amp_6q21	0.687	1
MBD1	Amp_19q13.43	0.687	1
MYO16	Amp_8q22.3	0.687	1
PPARG	PSMC6	0.687	1
PPARG	STK32B	0.687	1
PPARG	Amp_6q21	0.687	1
PPARG	Amp_19q13.43	0.687	1
PPP4R1	PSMC6	0.687	1
PPP4R1	STK32B	0.687	1
PPP4R1	ZNF773	0.687	1
PSMC6	USP28	0.687	1
PSMC6	Del_Xp11.3	0.687	1
SF3B3	Amp_8q22.3	0.687	1
STK32B	Del_Xp11.3	0.687	1
UGP2	Del_2q22.1	0.687	1
USP28	ZNF773	0.687	1
USP28	Amp_6q21	0.687	1
ZBTB47	5p-Amp	0.687	1
CNOT3	Del_Xp11.3	0.687	1
UNC93B1	5p-Amp	0.687	1
22q-Del	Amp_8q22.3	0.687	1
9q-Del	Del_8p21.3	0.687	1
Amp_11q22.2	Del_11p15.5	0.687	1
ATM	TRERF1	0.688	1
ATM	CNOT1	0.688	1
CDKN1A	HSP90AA1	0.688	1
CNNM4	SPTAN1	0.688	1
DIAPH2	TRERF1	0.688	1
DIAPH2	CNOT1	0.688	1
DIAPH2	Del_4q34.2	0.688	1
EP300	NFE2L2	0.688	1
EP300	SF3B1	0.688	1
GPS2	SPTAN1	0.688	1
MIPOL1	SPTAN1	0.688	1
SF1	Amp_7p11.2	0.688	1
SF3B1	11p-Del	0.688	1
CPD	Del_4q34.2	0.688	1
HSP90AA1	11q-Del	0.688	1
HSP90AA1	5q-Del	0.688	1
MYO16	17p-Del	0.688	1
NKX2-2	Amp_7p11.2	0.688	1
RBM10	SF3B3	0.688	1
SF3B3	Del_4q34.2	0.688	1
ASXL1	11q-Del	0.688	1
CNOT1	FAM47C	0.688	1
11p-Del	Amp_11q22.2	0.688	1
14q-Del	Amp_8q22.3	0.688	1
Amp_5p15.33	Del_4q34.2	0.688	1
PKHD1	Del_17p12	0.689	1
PSIP1	Del_12p13.1	0.689	1
RB1	RHOB	0.689	1
RB1	PSMC6	0.689	1
RB1	ZNF773	0.689	1
RB1	Amp_6q21	0.689	1
TP53	NCOA1	0.689	1
TP53	20q-Amp	0.689	1
ATAD5	Del_17p12	0.689	1
DENND5B	ASXL1	0.689	1
DENND5B	Del_12p13.1	0.689	1
HSP90AA1	7q-Amp	0.689	1
HSP90AA1	15q-Del	0.689	1
TFG	Amp_3p25.2	0.689	1
ARID1B	Del_8p23.3	0.689	1
DAZAP1	Del_2q37.1	0.689	1
CREBBP	Del_10q23.31	0.69	1
ERBB2	ITGA4	0.69	1
ERBB2	NEK11	0.69	1
FBXW7	Amp_1q21.3	0.69	1
FGFR3	Del_5q12.1	0.69	1
NF1	Del_4q22.1	0.69	1
NFE2L2	6q-Del	0.69	1
RPTN	Amp_8q22.3	0.69	1
RXRA	10q-Del	0.69	1
SARNP	Del_9p21.3	0.69	1
SF3B1	6q-Del	0.69	1
SF3B1	Del_15q13.1	0.69	1
STAG2	Del_5q12.1	0.69	1
TBC1D12	Amp_3q26.33	0.69	1
EPHA2	Amp_3p25.2	0.69	1
MYO16	10q-Del	0.69	1
MYO16	6q-Del	0.69	1
NAA15	Amp_8q22.3	0.69	1
SSH3	Amp_19q12	0.69	1
3q-Amp	16p-Del	0.69	1
10q-Del	Amp_11q22.2	0.69	1
Amp_3p25.2	Amp_4p16.3	0.69	1
Amp_3q26.33	Amp_7p21.1	0.69	1
Amp_11q22.2	Del_15q13.1	0.69	1
Amp_19q13.43	Del_13q14.2	0.69	1
Del_1q32.1	Del_13q14.2	0.69	1
ATM	ERBB3	0.691	1
CREBBP	FBXW7	0.691	1
ERBB2	TP53	0.691	1
FBXW7	Amp_7p21.1	0.691	1
NF1	Amp_5p15.33	0.691	1
NRAS	PSIP1	0.691	1
NRAS	DENND5B	0.691	1
NRAS	7q-Amp	0.691	1
PKHD1	Del_6q27	0.691	1
PSIP1	GLTP	0.691	1
PSIP1	HLA-A	0.691	1
TBC1D12	Amp_16p13.2	0.691	1
ATAD5	Del_6q27	0.691	1
CDK12	Amp_11q13.3	0.691	1
CDKN2AIPNL	Amp_1q23.3	0.691	1
DENND5B	GLTP	0.691	1
DENND5B	UBA52	0.691	1
DENND5B	ZBTB47	0.691	1
DENND5B	HLA-A	0.691	1
GLTP	RBM26	0.691	1
GLTP	7q-Amp	0.691	1
GLTP	15q-Del	0.691	1
MED13	Del_6q27	0.691	1
RBM26	HLA-A	0.691	1
RBM26	UNC93B1	0.691	1
UBA52	7q-Amp	0.691	1
UBA52	15q-Del	0.691	1
ZBTB47	7q-Amp	0.691	1
ZBTB47	15q-Del	0.691	1
HLA-A	7q-Amp	0.691	1
UNC93B1	7q-Amp	0.691	1
UNC93B1	15q-Del	0.691	1
4p-Del	Amp_11q13.3	0.691	1
CDKN2A	STAG2	0.692	1
CDKN2A	Amp_8p11.23	0.692	1
CDKN2A	Del_16p13.3	0.692	1
CNNM4	FOXA1	0.692	1
CNNM4	GPR50	0.692	1
CNNM4	RUNX1	0.692	1
CNNM4	CASP8	0.692	1
CNNM4	DCDC1	0.692	1
CNNM4	EXOSC10	0.692	1
CNNM4	THRAP3	0.692	1
CNNM4	ZNF750	0.692	1
CNNM4	BAP1	0.692	1
CNNM4	CDH1	0.692	1
CNNM4	EPS8	0.692	1
CNNM4	1q-Amp	0.692	1
CNNM4	Del_1p36.11	0.692	1
CTNNB1	MIPOL1	0.692	1
CTNNB1	TFG	0.692	1
ERBB3	14q-Del	0.692	1
FGFR3	RHOB	0.692	1
FOXA1	MIPOL1	0.692	1
FOXA1	SF1	0.692	1
FOXA1	ZNF511	0.692	1
FOXA1	NKX2-2	0.692	1
FOXA1	TFG	0.692	1
FOXQ1	GPS2	0.692	1
FOXQ1	SF1	0.692	1
FOXQ1	ZNF511	0.692	1
FOXQ1	NKX2-2	0.692	1
GPR50	GPS2	0.692	1
GPR50	NKX2-2	0.692	1
GPS2	KRAS	0.692	1
GPS2	NFE2L3	0.692	1
GPS2	PTEN	0.692	1
GPS2	RUNX1	0.692	1
GPS2	DCDC1	0.692	1
GPS2	IKZF2	0.692	1
GPS2	THRAP3	0.692	1
GPS2	BAP1	0.692	1
GPS2	CDH1	0.692	1
GPS2	EPS8	0.692	1
GPS2	1q-Amp	0.692	1
GPS2	Del_1p36.11	0.692	1
KLF5	HFM1	0.692	1
KLF5	KDM5A	0.692	1
KLF5	NCOA1	0.692	1
KLF5	Amp_4p16.3	0.692	1
KRAS	ZNF511	0.692	1
KRAS	NKX2-2	0.692	1
MIPOL1	RUNX1	0.692	1
MIPOL1	IKZF2	0.692	1
MIPOL1	Del_1p36.11	0.692	1
NFE2L3	SF1	0.692	1
NFE2L3	ZNF511	0.692	1
NFE2L3	NKX2-2	0.692	1
PIK3CA	ZFP36L2	0.692	1
PIK3CA	3p-Amp	0.692	1
PTEN	ZNF511	0.692	1
PTEN	TFG	0.692	1
RUNX1	TFG	0.692	1
SF1	CASP8	0.692	1
SF1	EXOSC10	0.692	1
SF1	IKZF2	0.692	1
SF1	THRAP3	0.692	1
SF1	WAC	0.692	1
SF1	BAP1	0.692	1
SF1	EPS8	0.692	1
SF1	Del_1p36.11	0.692	1
ZNF511	CASP8	0.692	1
ZNF511	EXOSC10	0.692	1
ZNF511	BAP1	0.692	1
ZNF511	CDH1	0.692	1
ZNF511	EPS8	0.692	1
ZNF511	1q-Amp	0.692	1
ZNF511	Del_1p36.11	0.692	1
DENND5B	Del_2q37.1	0.692	1
EPHA2	ARID1B	0.692	1
EPHA2	7p-Amp	0.692	1
EPHA2	4q-Del	0.692	1
EXOSC10	NKX2-2	0.692	1
EXOSC10	TFG	0.692	1
HFM1	4q-Del	0.692	1
IKZF2	NKX2-2	0.692	1
KDM5A	PARD3	0.692	1
KDM5A	7p-Amp	0.692	1
KDM5A	4q-Del	0.692	1
NCOA1	4q-Del	0.692	1
NDC80	Del_2q34	0.692	1
NKX2-2	THRAP3	0.692	1
NKX2-2	WAC	0.692	1
NKX2-2	CDH1	0.692	1
NKX2-2	EPS8	0.692	1
NKX2-2	1q-Amp	0.692	1
NKX2-2	Del_1p36.11	0.692	1
PARD3	Amp_4p16.3	0.692	1
TFG	ZNF750	0.692	1
TFG	BAP1	0.692	1
TFG	Del_1p36.11	0.692	1
TXNIP	Del_8p21.3	0.692	1
ARID1B	OGDH	0.692	1
DNAH6	Del_8p21.3	0.692	1
OGDH	7p-Amp	0.692	1
19q-Amp	Del_2q34	0.692	1
7q-Amp	Del_2q37.1	0.692	1
4q-Del	Amp_4p16.3	0.692	1
Del_11p15.5	Del_16q23.1	0.692	1
FBXW7	9p-Del	0.693	1
PKHD1	RB1	0.693	1
RB1	MED13	0.693	1
CDK12	Del_17p12	0.693	1
ELF3	22q-Del	0.694	1
ELF3	Amp_11q22.2	0.694	1
ERBB2	KLF5	0.694	1
ERBB2	7p-Amp	0.694	1
KLF5	PLCXD3	0.694	1
KLF5	AGR3	0.694	1
KLF5	RBP2	0.694	1
NFE2L2	Amp_17q23.3	0.694	1
PLCXD3	PARD3	0.694	1
PLCXD3	7p-Amp	0.694	1
RXRA	Del_3p14.2	0.694	1
SF3B1	Del_3p14.2	0.694	1
ZFP36L1	DDX3X	0.694	1
ZFP36L1	NDC80	0.694	1
ZFP36L1	RARG	0.694	1
ZFP36L1	19q-Amp	0.694	1
ZNF180	ARID2	0.694	1
ZNF180	Amp_1p34.2	0.694	1
AGR3	7p-Amp	0.694	1
AGR3	4q-Del	0.694	1
ARID2	NAA15	0.694	1
ARID2	NDC80	0.694	1
ARID2	19q-Amp	0.694	1
ARID2	Amp_4q13.3	0.694	1
ARID2	Del_7q36.3	0.694	1
CDK12	Amp_10p14	0.694	1
MYO16	Amp_17q23.3	0.694	1
NDC80	Amp_1p34.2	0.694	1
PARD3	ADC	0.694	1
RBP2	ARID1B	0.694	1
RIPK4	9q-Del	0.694	1
ZNF626	Del_5q12.1	0.694	1
ADC	7p-Amp	0.694	1
ADC	4q-Del	0.694	1
DAZAP1	7p-Amp	0.694	1
19q-Amp	Amp_1p34.2	0.694	1
20p-Amp	Del_16q23.1	0.694	1
3p-Amp	9q-Del	0.694	1
7p-Amp	Amp_19q12	0.694	1
7q-Amp	Amp_1q23.3	0.694	1
16p-Del	Del_3p14.2	0.694	1
22q-Del	Amp_17q23.3	0.694	1
CNNM4	Del_8p23.3	0.695	1
CTNNB1	ATAD5	0.695	1
CTNNB1	MED13	0.695	1
FBXW7	FOXQ1	0.695	1
FBXW7	GPR50	0.695	1
FBXW7	KRAS	0.695	1
FBXW7	BAP1	0.695	1
FBXW7	EPS8	0.695	1
FBXW7	Del_1p36.11	0.695	1
FOXA1	PKHD1	0.695	1
FOXA1	ATAD5	0.695	1
FOXA1	Amp_16p13.2	0.695	1
FOXQ1	PKHD1	0.695	1
FOXQ1	Amp_16p13.2	0.695	1
GPR50	Amp_16p13.2	0.695	1
KRAS	MED13	0.695	1
KRAS	Amp_16p13.2	0.695	1
MIPOL1	Del_8p23.3	0.695	1
NFE2L3	PKHD1	0.695	1
NFE2L3	Amp_16p13.2	0.695	1
PKHD1	PTEN	0.695	1
PKHD1	DCDC1	0.695	1
PKHD1	EXOSC10	0.695	1
PKHD1	IKZF2	0.695	1
PKHD1	ZNF750	0.695	1
PKHD1	BAP1	0.695	1
PKHD1	1q-Amp	0.695	1
PKHD1	Del_1p36.11	0.695	1
PTEN	ATAD5	0.695	1
PTEN	MED13	0.695	1
PTEN	Amp_16p13.2	0.695	1
RUNX1	ATAD5	0.695	1
ZFP36L1	Del_11q23.3	0.695	1
ARID2	20q-Amp	0.695	1
ATAD5	IKZF2	0.695	1
ATAD5	Del_1p36.11	0.695	1
DCDC1	MED13	0.695	1
HSP90AA1	8p-Del	0.695	1
IKZF2	Amp_16p13.2	0.695	1
MED13	BAP1	0.695	1
MED13	CDH1	0.695	1
MED13	Del_1p36.11	0.695	1
WAC	Amp_16p13.2	0.695	1
EPS8	Amp_16p13.2	0.695	1
Amp_1q23.3	Del_6q27	0.695	1
Amp_16p13.2	Del_1p36.11	0.695	1
ARID1A	Del_11p15.5	0.696	1
C12orf43	Del_10q23.31	0.696	1
ELF3	Del_11q25	0.696	1
ERBB2	POTEG	0.696	1
ERBB2	ZNF486	0.696	1
ERBB2	UGP2	0.696	1
ERCC2	PSIP1	0.696	1
ERCC2	RBM26	0.696	1
HIST1H2AG	Amp_11q13.3	0.696	1
IDH1	Amp_19q12	0.696	1
NHLRC1	Amp_11q13.3	0.696	1
PIGS	Amp_19q12	0.696	1
POTEG	Amp_19q12	0.696	1
TGIF2LX	Amp_3q26.33	0.696	1
TGIF2LX	Del_10q23.31	0.696	1
FAT1	ASXL1	0.696	1
HSP90AA1	20q-Amp	0.696	1
HSP90AA1	Del_11q23.3	0.696	1
OR10Z1	Amp_19q12	0.696	1
PHLDA3	Amp_3q26.33	0.696	1
SNRPB	Amp_11q13.3	0.696	1
ASXL1	Del_11q23.3	0.696	1
SCARF2	Amp_3q26.33	0.696	1
SCARF2	Del_10q23.31	0.696	1
TMCO4	Amp_8q22.3	0.696	1
19p-Del	Amp_11q13.3	0.696	1
Amp_8q22.3	Del_Xq21.33	0.696	1
ASXL2	HIST1H3B	0.697	1
ASXL2	17q-Amp	0.697	1
ASXL2	Del_Xq21.33	0.697	1
METTL3	SF3B1	0.697	1
MIPOL1	Del_11p15.5	0.697	1
PIK3CA	FUT5	0.697	1
PIK3CA	ZNF185	0.697	1
RHOA	SF3B1	0.697	1
RHOA	MYO16	0.697	1
RPTN	Amp_5p15.33	0.697	1
RXRA	SHANK1	0.697	1
SF1	Del_11p15.5	0.697	1
SHANK1	16p-Del	0.697	1
TP53	ACTB	0.697	1
TP53	3p-Amp	0.697	1
CDK12	TXNIP	0.697	1
DDX3X	Amp_5p15.33	0.697	1
NDC80	Amp_5p15.33	0.697	1
NKX2-2	Del_11p15.5	0.697	1
PARD3	5p-Amp	0.697	1
PPARGC1A	14q-Del	0.697	1
SSH3	14q-Del	0.697	1
SSH3	4p-Del	0.697	1
TFG	Del_11p15.5	0.697	1
TXNIP	4p-Del	0.697	1
ZBTB47	Amp_1q23.3	0.697	1
DNAH6	14q-Del	0.697	1
HLA-A	Amp_1q23.3	0.697	1
20p-Amp	Del_18q23	0.697	1
20q-Amp	Amp_17q12	0.697	1
5p-Amp	4q-Del	0.697	1
Amp_17q12	Del_11q23.3	0.697	1
Amp_17q12	Del_18q23	0.697	1
Amp_19q13.43	Del_4q34.2	0.697	1
DIAPH2	PIK3CA	0.698	1
EP300	METTL3	0.698	1
EP300	RHOA	0.698	1
GPS2	Amp_12q15	0.698	1
GPS2	Del_6p25.3	0.698	1
MIPOL1	Amp_12q15	0.698	1
MIPOL1	Del_6p25.3	0.698	1
RHOA	17p-Del	0.698	1
SF1	Amp_13q22.1	0.698	1
SF1	Del_6p25.3	0.698	1
ZNF511	Amp_12q15	0.698	1
ZNF511	Del_16q23.1	0.698	1
NKX2-2	Amp_12q15	0.698	1
TFG	Amp_12q15	0.698	1
TFG	Amp_13q22.1	0.698	1
SPTAN1	Del_2q22.1	0.698	1
9p-Del	Amp_17q12	0.698	1
Amp_3p25.2	Del_6q27	0.698	1
Amp_3p25.2	Del_11q25	0.698	1
Amp_10p14	Amp_11q13.3	0.698	1
ASXL2	DIAPH2	0.699	1
ASXL2	RBM10	0.699	1
ASXL2	CNOT1	0.699	1
BTG2	C3orf70	0.699	1
BTG2	ZFP36L2	0.699	1
BTG2	ZNF626	0.699	1
BTG2	3p-Amp	0.699	1
C12orf43	C3orf70	0.699	1
C12orf43	HRAS	0.699	1
C12orf43	ACTB	0.699	1
C12orf43	RIPK4	0.699	1
C12orf43	ZNF626	0.699	1
C12orf43	CUL1	0.699	1
C12orf43	3p-Amp	0.699	1
C3orf70	NHLRC1	0.699	1
C3orf70	LETMD1	0.699	1
C3orf70	SCARF2	0.699	1
C3orf70	19p-Del	0.699	1
COPZ2	Amp_7p11.2	0.699	1
CTNNB1	Amp_11q13.3	0.699	1
FOXQ1	Del_10q23.31	0.699	1
GPR50	Amp_11q13.3	0.699	1
HIST1H2AG	HRAS	0.699	1
HIST1H2AG	ACTB	0.699	1
HIST1H2AG	SLC9A4	0.699	1
HIST1H2AG	CUL1	0.699	1
HIST1H2AG	3p-Amp	0.699	1
HRAS	NHLRC1	0.699	1
HRAS	TGIF2LX	0.699	1
HRAS	CCNE2	0.699	1
HRAS	IL10RB	0.699	1
HRAS	SNRPB	0.699	1
HRAS	TAF11	0.699	1
HRAS	SCARF2	0.699	1
HRAS	19p-Del	0.699	1
KPTN	SPTAN1	0.699	1
KPTN	Amp_7p11.2	0.699	1
KRAS	Amp_3q26.33	0.699	1
KRAS	Del_10q23.31	0.699	1
NHLRC1	ACTB	0.699	1
NHLRC1	RIPK4	0.699	1
NHLRC1	SLC9A4	0.699	1
PTTG1IP	Amp_7p11.2	0.699	1
SHANK1	20p-Amp	0.699	1
SHANK1	Del_22q13.32	0.699	1
TGIF2LX	CUL1	0.699	1
TGIF2LX	3p-Amp	0.699	1
ZFP36L2	LETMD1	0.699	1
ZFP36L2	SNRPB	0.699	1
ZFP36L2	SCARF2	0.699	1
ZFP36L2	19p-Del	0.699	1
ACTB	IL10RB	0.699	1
ACTB	LETMD1	0.699	1
ACTB	PHLDA3	0.699	1
ACTB	SNRPB	0.699	1
ACTB	TAF11	0.699	1
ACTB	SCARF2	0.699	1
ACTB	19p-Del	0.699	1
CASP8	Del_10q23.31	0.699	1
CCNE2	SLC9A4	0.699	1
CCNE2	ZNF626	0.699	1
CCNE2	3p-Amp	0.699	1
CDK12	DLX6	0.699	1
CDK12	FUT5	0.699	1
CDK12	ZNF185	0.699	1
CDK12	Amp_20q11.21	0.699	1
DCDC1	Amp_3q26.33	0.699	1
DCDC1	Amp_11q13.3	0.699	1
DLX6	14q-Del	0.699	1
DLX6	4p-Del	0.699	1
IKZF2	Amp_11q13.3	0.699	1
IKZF2	Del_10q23.31	0.699	1
IL10RB	RIPK4	0.699	1
IL10RB	SLC9A4	0.699	1
IL10RB	CUL1	0.699	1
IL10RB	3p-Amp	0.699	1
LETMD1	RIPK4	0.699	1
LETMD1	SLC9A4	0.699	1
LETMD1	CUL1	0.699	1
LETMD1	3p-Amp	0.699	1
PHLDA3	RIPK4	0.699	1
PHLDA3	SLC9A4	0.699	1
PHLDA3	CUL1	0.699	1
PHLDA3	3p-Amp	0.699	1
RIPK4	SNRPB	0.699	1
RIPK4	SCARF2	0.699	1
RIPK4	19p-Del	0.699	1
SF3B3	Amp_17q12	0.699	1
SLC9A4	TAF11	0.699	1
SLC9A4	19p-Del	0.699	1
SNRPB	ZNF626	0.699	1
SNRPB	CUL1	0.699	1
SNRPB	3p-Amp	0.699	1
TAF11	CUL1	0.699	1
TAF11	3p-Amp	0.699	1
THRAP3	Amp_11q13.3	0.699	1
TRERF1	Amp_17q12	0.699	1
WAC	Amp_11q13.3	0.699	1
ZNF626	SCARF2	0.699	1
ZNF626	19p-Del	0.699	1
CDH1	Amp_11q13.3	0.699	1
CDH1	Del_10q23.31	0.699	1
CUL1	SCARF2	0.699	1
CUL1	19p-Del	0.699	1
EPS8	Del_10q23.31	0.699	1
SCARF2	3p-Amp	0.699	1
ZNF185	14q-Del	0.699	1
ZNF185	4p-Del	0.699	1
1q-Amp	Amp_3q26.33	0.699	1
3p-Amp	19p-Del	0.699	1
ASXL2	Del_8p23.3	0.7	1
CDKN2A	ARID2	0.7	1
ELF3	Del_14q24.1	0.7	1
HIST1H3B	5p-Amp	0.7	1
NF2	18q-Del	0.7	1
TP53	20p-Amp	0.7	1
TSC1	DPYS	0.7	1
TSC1	MBD1	0.7	1
TSC1	USP28	0.7	1
STK32B	18q-Del	0.7	1
ARID1B	Del_17p12	0.7	1
CNOT3	18q-Del	0.7	1
17q-Amp	5p-Amp	0.7	1
5p-Amp	Del_Xq21.33	0.7	1
18q-Del	Amp_6q21	0.7	1
18q-Del	Amp_17q23.3	0.7	1
ASXL2	Amp_20q11.21	0.701	1
CDKN2A	Del_22q13.32	0.701	1
ELF3	Del_8p23.3	0.701	1
EP300	NRAS	0.701	1
EP300	ZBTB47	0.701	1
EP300	HLA-A	0.701	1
EP300	UNC93B1	0.701	1
IDH1	DDX3X	0.701	1
IDH1	NDC80	0.701	1
IDH1	RARG	0.701	1
IDH1	19q-Amp	0.701	1
IDH1	Del_7q36.3	0.701	1
KDM6A	RBM10	0.701	1
KDM6A	CNOT1	0.701	1
KDM6A	FAM47C	0.701	1
NRAS	17p-Del	0.701	1
PIGS	DDX3X	0.701	1
PIGS	NDC80	0.701	1
PIGS	19q-Amp	0.701	1
POTEG	ZNF180	0.701	1
POTEG	NAA15	0.701	1
POTEG	NDC80	0.701	1
POTEG	RARG	0.701	1
POTEG	19q-Amp	0.701	1
POTEG	Amp_4q13.3	0.701	1
RPTN	FUS	0.701	1
SARNP	NDC80	0.701	1
SARNP	RARG	0.701	1
ZNF180	OR10Z1	0.701	1
ZNF180	UGP2	0.701	1
ZNF486	NDC80	0.701	1
ZNF486	RARG	0.701	1
ZNF486	19q-Amp	0.701	1
ZNF486	Amp_4q13.3	0.701	1
ZNF486	Del_7q36.3	0.701	1
DDX3X	OR10Z1	0.701	1
DDX3X	FUS	0.701	1
DDX3X	Del_2q37.1	0.701	1
FAT1	Del_6p25.3	0.701	1
GLTP	11p-Del	0.701	1
KDM5A	Del_11p15.5	0.701	1
NAA15	FUS	0.701	1
NCOA1	Del_11p15.5	0.701	1
NDC80	OR10Z1	0.701	1
NDC80	UGP2	0.701	1
NDC80	FUS	0.701	1
OR10Z1	RARG	0.701	1
OR10Z1	19q-Amp	0.701	1
OR10Z1	Amp_4q13.3	0.701	1
RARG	UGP2	0.701	1
UGP2	Amp_4q13.3	0.701	1
ZBTB47	11p-Del	0.701	1
FUS	19q-Amp	0.701	1
FUS	Amp_4q13.3	0.701	1
FUS	Del_7q36.3	0.701	1
HLA-A	11p-Del	0.701	1
UNC93B1	11p-Del	0.701	1
19q-Amp	Del_2q37.1	0.701	1
20q-Amp	Amp_13q22.1	0.701	1
8q-Amp	Del_10q23.31	0.701	1
Amp_17q23.3	Del_8p23.3	0.701	1
CDKN1A	Del_8p21.3	0.702	1
CREBBP	PPARGC1A	0.702	1
CREBBP	TXNIP	0.702	1
GTF2I	Amp_7p21.1	0.702	1
GTF2I	Del_6q27	0.702	1
SF3B1	Del_18q23	0.702	1
TBC1D12	DNAH6	0.702	1
TSC1	CDKN2AIPNL	0.702	1
ITGA4	Del_6q27	0.702	1
MYO16	Del_18q23	0.702	1
NEK11	Amp_7p21.1	0.702	1
NEK11	Del_6q27	0.702	1
PPARGC1A	Amp_7p21.1	0.702	1
TXNIP	Amp_7p21.1	0.702	1
DNAH6	Amp_7p21.1	0.702	1
DNAH6	Del_11q25	0.702	1
Amp_10p14	Del_11p15.5	0.702	1
ERBB3	Del_9p23	0.703	1
NF1	Amp_22q12.2	0.703	1
PIK3CA	Amp_6p22.3	0.703	1
ZNF180	FAT1	0.703	1
ZNF180	20q-Amp	0.703	1
FAT1	19q-Amp	0.703	1
MED13	Amp_6p22.3	0.703	1
NDC80	20q-Amp	0.703	1
RARG	Del_11q23.3	0.703	1
19q-Amp	20q-Amp	0.703	1
19q-Amp	Del_11q23.3	0.703	1
10q-Del	Amp_19q13.43	0.703	1
Del_7q36.3	Del_11q23.3	0.703	1
ATM	BTG2	0.704	1
ATM	HIST1H2AG	0.704	1
ATM	NHLRC1	0.704	1
ATM	TGIF2LX	0.704	1
ATM	TAF11	0.704	1
ATM	19p-Del	0.704	1
BTG2	Del_4q34.2	0.704	1
EP300	Del_6q27	0.704	1
ERBB3	9p-Del	0.704	1
HIST1H2AG	Del_4q34.2	0.704	1
NHLRC1	Del_4q34.2	0.704	1
NRAS	EPHA2	0.704	1
NRAS	HFM1	0.704	1
NRAS	KDM5A	0.704	1
NRAS	NCOA1	0.704	1
NRAS	OGDH	0.704	1
NRAS	Amp_4p16.3	0.704	1
EPHA2	GLTP	0.704	1
EPHA2	UBA52	0.704	1
EPHA2	HLA-A	0.704	1
EPHA2	UNC93B1	0.704	1
GLTP	HFM1	0.704	1
GLTP	KDM5A	0.704	1
GLTP	NCOA1	0.704	1
GLTP	OGDH	0.704	1
GLTP	Amp_4p16.3	0.704	1
HFM1	HLA-A	0.704	1
HFM1	UNC93B1	0.704	1
KDM5A	HLA-A	0.704	1
NCOA1	UNC93B1	0.704	1
SLC9A4	Amp_22q12.2	0.704	1
TAF11	Del_4q34.2	0.704	1
UBA52	OGDH	0.704	1
UBA52	Amp_4p16.3	0.704	1
ZBTB47	OGDH	0.704	1
ZBTB47	Amp_4p16.3	0.704	1
ZNF626	Amp_22q12.2	0.704	1
HLA-A	OGDH	0.704	1
UNC93B1	Amp_4p16.3	0.704	1
19p-Del	Del_4q34.2	0.704	1
C12orf43	Del_17p12	0.705	1
CDKN1A	FBXW7	0.705	1
CDKN1A	MED13	0.705	1
CDKN1A	Amp_1q21.3	0.705	1
CDKN1A	Amp_16p13.2	0.705	1
COPZ2	Amp_12q15	0.705	1
COPZ2	Amp_13q22.1	0.705	1
COPZ2	Del_6p25.3	0.705	1
COPZ2	Del_16q23.1	0.705	1
CREBBP	IDH1	0.705	1
CREBBP	PIGS	0.705	1
CREBBP	SARNP	0.705	1
CREBBP	ZNF486	0.705	1
EP300	Del_5q12.1	0.705	1
IDH1	Amp_7p21.1	0.705	1
IDH1	Del_11q25	0.705	1
KPTN	Amp_12q15	0.705	1
KPTN	Amp_13q22.1	0.705	1
PIGS	TBC1D12	0.705	1
PIGS	Del_6q27	0.705	1
PLCXD3	HSP90AA1	0.705	1
PTTG1IP	Amp_12q15	0.705	1
PTTG1IP	Amp_13q22.1	0.705	1
PTTG1IP	Del_6p25.3	0.705	1
PTTG1IP	Del_16q23.1	0.705	1
TBC1D12	ZNF486	0.705	1
TBC1D12	FUS	0.705	1
TGIF2LX	Del_17p12	0.705	1
ZFP36L2	SPTAN1	0.705	1
ZFP36L2	Amp_7p11.2	0.705	1
AGR3	Del_12p13.1	0.705	1
FAT1	20q-Amp	0.705	1
HSP90AA1	DAZAP1	0.705	1
IL10RB	Del_17p12	0.705	1
MED13	5q-Del	0.705	1
RIPK4	Del_13q14.2	0.705	1
UGP2	Amp_7p21.1	0.705	1
UGP2	Del_11q25	0.705	1
ZNF626	SPTAN1	0.705	1
ADC	ASXL1	0.705	1
DAZAP1	Del_12p13.1	0.705	1
FUS	Amp_7p21.1	0.705	1
FUS	Del_6q27	0.705	1
FUS	Del_11q25	0.705	1
SCARF2	Del_17p12	0.705	1
20p-Amp	Del_2q34	0.705	1
5p-Amp	Amp_19q13.43	0.705	1
11q-Del	Amp_16p13.2	0.705	1
19p-Del	Del_17p12	0.705	1
Amp_5p15.33	Del_13q14.2	0.705	1
Amp_10p14	Del_15q13.1	0.705	1
ARID1A	KDM6A	0.706	1
CTNNB1	KDM6A	0.706	1
FOXQ1	KDM6A	0.706	1
KDM6A	RUNX1	0.706	1
KDM6A	IKZF2	0.706	1
KDM6A	ZNF750	0.706	1
MARK2	Del_8p23.3	0.706	1
PPP4R1	Del_8p23.3	0.706	1
Del_8p23.3	Del_Xp11.3	0.706	1
CSMD3	HFM1	0.707	1
FBXW7	RXRA	0.707	1
FBXW7	MYO16	0.707	1
FBXW7	Amp_11q22.2	0.707	1
HIST1H3B	NF2	0.707	1
HIST1H3B	ZBTB7B	0.707	1
HIST1H3B	PSMC6	0.707	1
HIST1H3B	STK32B	0.707	1
HIST1H3B	CNOT3	0.707	1
HORMAD1	17q-Amp	0.707	1
NF2	GNA13	0.707	1
NF2	TMCO4	0.707	1
NF2	17q-Amp	0.707	1
NF2	Del_1q32.1	0.707	1
NF2	Del_Xq21.33	0.707	1
NFE2L2	ATAD5	0.707	1
PKHD1	RXRA	0.707	1
PKHD1	Amp_11q22.2	0.707	1
RPTN	TP53	0.707	1
SF3B1	Amp_16p13.2	0.707	1
ZBTB7B	GNA13	0.707	1
ZBTB7B	TMCO4	0.707	1
ZBTB7B	17q-Amp	0.707	1
ZBTB7B	Del_1q32.1	0.707	1
ATAD5	22q-Del	0.707	1
HSP90AA1	9q-Del	0.707	1
PSMC6	GNA13	0.707	1
PSMC6	17q-Amp	0.707	1
PSMC6	Del_1q32.1	0.707	1
STK32B	GNA13	0.707	1
STK32B	17q-Amp	0.707	1
STK32B	Del_1q32.1	0.707	1
STK32B	Del_Xq21.33	0.707	1
CNOT3	GNA13	0.707	1
CNOT3	TMCO4	0.707	1
CNOT3	17q-Amp	0.707	1
CNOT3	Del_1q32.1	0.707	1
CNOT3	Del_Xq21.33	0.707	1
GNA13	ZNF773	0.707	1
GNA13	Amp_6q21	0.707	1
TMCO4	Amp_6q21	0.707	1
ZNF773	17q-Amp	0.707	1
ZNF773	Del_1q32.1	0.707	1
16p-Del	Amp_16p13.2	0.707	1
Amp_6q21	Del_1q32.1	0.707	1
Amp_6q21	Del_Xq21.33	0.707	1
Amp_11q22.2	Amp_16p13.2	0.707	1
Del_6q27	Del_9p21.3	0.707	1
ASXL2	NF1	0.708	1
CDKN1A	17p-Del	0.708	1
CDKN2A	DLX6	0.708	1
CREBBP	KLF5	0.708	1
CREBBP	4q-Del	0.708	1
EP300	Del_19p13.3	0.708	1
KLF5	TBC1D12	0.708	1
NF1	Amp_17q12	0.708	1
NRAS	8q-Amp	0.708	1
RB1	RBP2	0.708	1
RB1	ADC	0.708	1
RB1	DAZAP1	0.708	1
RHOB	FUT5	0.708	1
RHOB	ZNF185	0.708	1
TBC1D12	PARD3	0.708	1
GLTP	Del_18q23	0.708	1
PARD3	Del_11q25	0.708	1
ADC	9p-Del	0.708	1
CNOT3	Del_9p21.3	0.708	1
ARID1A	8q-Amp	0.709	1
ATM	TBC1D12	0.709	1
CDKN1A	TMCO4	0.709	1
CDKN1A	Del_1q32.1	0.709	1
CTNNB1	NF1	0.709	1
DIAPH2	15q-Del	0.709	1
ERBB2	Del_4q22.1	0.709	1
FOXA1	NF1	0.709	1
FOXQ1	NF1	0.709	1
GPR50	NF1	0.709	1
GPS2	20p-Amp	0.709	1
HIST1H3B	11q-Del	0.709	1
HIST1H3B	5q-Del	0.709	1
HIST1H3B	Del_19p13.3	0.709	1
KRAS	NF1	0.709	1
MIPOL1	20p-Amp	0.709	1
MIPOL1	Amp_1q23.3	0.709	1
NF1	DCDC1	0.709	1
NF1	BAP1	0.709	1
NF1	EPS8	0.709	1
NF1	1q-Amp	0.709	1
PSIP1	FAM47C	0.709	1
PSIP1	Amp_3q26.33	0.709	1
SF1	Amp_1q23.3	0.709	1
SF1	Del_22q13.32	0.709	1
TBC1D12	Del_4q34.2	0.709	1
CPD	DENND5B	0.709	1
DENND5B	CNOT1	0.709	1
DENND5B	Amp_3q26.33	0.709	1
DENND5B	Amp_11q13.3	0.709	1
DENND5B	Del_10q23.31	0.709	1
HFM1	Del_17p12	0.709	1
NKX2-2	20p-Amp	0.709	1
PARD3	Amp_1q23.3	0.709	1
RBM10	7q-Amp	0.709	1
RBM26	CNOT1	0.709	1
SF3B3	7q-Amp	0.709	1
TFG	20p-Amp	0.709	1
TRERF1	7q-Amp	0.709	1
GNA13	11q-Del	0.709	1
17q-Amp	11q-Del	0.709	1
17q-Amp	5q-Del	0.709	1
17q-Amp	Del_19p13.3	0.709	1
7p-Amp	Amp_1q23.3	0.709	1
7q-Amp	Amp_11q13.3	0.709	1
7q-Amp	Del_10q23.31	0.709	1
5q-Del	Del_1q32.1	0.709	1
Amp_5p15.33	Del_18q23	0.709	1
Amp_6p22.3	Del_12p13.1	0.709	1
Amp_19q12	Del_4q22.1	0.709	1
ATM	FOXA1	0.71	1
ATM	PTEN	0.71	1
ATM	IKZF2	0.71	1
ATM	BAP1	0.71	1
CTNNB1	Del_4q34.2	0.71	1
GPR50	Del_4q34.2	0.71	1
STAG2	Del_13q14.2	0.71	1
CDKN2AIPNL	3q-Amp	0.71	1
CDKN2AIPNL	10q-Del	0.71	1
CDKN2AIPNL	6q-Del	0.71	1
DENND5B	Del_4q22.1	0.71	1
EPHA2	18q-Del	0.71	1
IKZF2	Del_4q34.2	0.71	1
KDM5A	Del_14q24.1	0.71	1
NCOA1	Del_14q24.1	0.71	1
OGDH	Del_14q24.1	0.71	1
CFHR4	CNNM4	0.711	1
CFHR4	GPS2	0.711	1
CFHR4	MIPOL1	0.711	1
CFHR4	SF1	0.711	1
CFHR4	ZNF511	0.711	1
CFHR4	NKX2-2	0.711	1
CNNM4	PROS1	0.711	1
CNNM4	CTCF	0.711	1
CNNM4	DPYS	0.711	1
CNNM4	MARK2	0.711	1
COPZ2	20p-Amp	0.711	1
CSMD3	DPYS	0.711	1
CSMD3	MARK2	0.711	1
CSMD3	PPARG	0.711	1
ERCC2	NF2	0.711	1
ERCC2	PSMC6	0.711	1
ERCC2	STK32B	0.711	1
FBXW7	Del_9p21.3	0.711	1
GPS2	PROS1	0.711	1
GPS2	CTCF	0.711	1
GPS2	DPYS	0.711	1
GPS2	MARK2	0.711	1
GPS2	MBD1	0.711	1
GPS2	PPARG	0.711	1
GPS2	USP28	0.711	1
KPTN	20p-Amp	0.711	1
KPTN	Del_22q13.32	0.711	1
MIPOL1	PROS1	0.711	1
MIPOL1	DPYS	0.711	1
MIPOL1	PPP4R1	0.711	1
MIPOL1	USP28	0.711	1
MIPOL1	Del_Xp11.3	0.711	1
PIK3CA	ZFP36L1	0.711	1
PROS1	ZNF511	0.711	1
PROS1	NKX2-2	0.711	1
PTTG1IP	20p-Amp	0.711	1
PTTG1IP	Del_22q13.32	0.711	1
SF1	DPYS	0.711	1
SF1	MBD1	0.711	1
SF1	PPARG	0.711	1
SF1	PPP4R1	0.711	1
SF1	USP28	0.711	1
SF1	Del_Xp11.3	0.711	1
ZNF511	DPYS	0.711	1
ZNF511	MARK2	0.711	1
ZNF511	USP28	0.711	1
DPYS	NKX2-2	0.711	1
DPYS	TFG	0.711	1
EPHA2	HSP90AA1	0.711	1
EPHA2	Del_12p13.1	0.711	1
HFM1	HSP90AA1	0.711	1
HSP90AA1	OGDH	0.711	1
KDM5A	ASXL1	0.711	1
KDM5A	Del_12p13.1	0.711	1
MARK2	NKX2-2	0.711	1
MARK2	TFG	0.711	1
MBD1	NKX2-2	0.711	1
NKX2-2	PPP4R1	0.711	1
NKX2-2	USP28	0.711	1
NKX2-2	Del_Xp11.3	0.711	1
TFG	Del_Xp11.3	0.711	1
ASXL1	OGDH	0.711	1
5p-Amp	Del_2q34	0.711	1
CDKN2A	Amp_1q21.3	0.712	1
ERBB3	SHANK1	0.712	1
ZFP36L1	Del_4q22.1	0.712	1
IKZF2	Amp_3p25.2	0.712	1
WAC	Amp_3p25.2	0.712	1
EPS8	Amp_3p25.2	0.712	1
SPTAN1	Del_2q37.1	0.712	1
Amp_3p25.2	Del_1p36.11	0.712	1
Amp_8q22.3	Del_9p23	0.712	1
CDKN2A	ITGA4	0.713	1
CDKN2A	PPARGC1A	0.713	1
CDKN2A	DNAH6	0.713	1
CFHR4	3q-Amp	0.713	1
CFHR4	10q-Del	0.713	1
EP300	ZFP36L1	0.713	1
PROS1	3q-Amp	0.713	1
PROS1	10q-Del	0.713	1
RHOB	PPARGC1A	0.713	1
RHOB	SSH3	0.713	1
RHOB	TXNIP	0.713	1
ARID2	11p-Del	0.713	1
CTCF	3q-Amp	0.713	1
CTCF	6q-Del	0.713	1
DPYS	10q-Del	0.713	1
MARK2	10q-Del	0.713	1
MBD1	10q-Del	0.713	1
PARD3	Del_15q13.1	0.713	1
PPARG	6q-Del	0.713	1
PPP4R1	6q-Del	0.713	1
PPP4R1	Del_15q13.1	0.713	1
USP28	10q-Del	0.713	1
ASXL1	Amp_5p15.33	0.713	1
3q-Amp	7p-Amp	0.713	1
3q-Amp	4q-Del	0.713	1
7p-Amp	10q-Del	0.713	1
7p-Amp	6q-Del	0.713	1
7p-Amp	Del_15q13.1	0.713	1
11p-Del	Amp_1p34.2	0.713	1
Amp_8p11.21	Del_2q37.1	0.713	1
BTG2	PPARGC1A	0.714	1
BTG2	SSH3	0.714	1
BTG2	TXNIP	0.714	1
BTG2	DNAH6	0.714	1
C12orf43	ITGA4	0.714	1
C12orf43	SSH3	0.714	1
C12orf43	TXNIP	0.714	1
CDKN1A	RBM10	0.714	1
CDKN1A	SF3B3	0.714	1
CDKN1A	CNOT1	0.714	1
CSMD3	Amp_16p13.2	0.714	1
DIAPH2	5q-Del	0.714	1
ELF3	GTF2I	0.714	1
ELF3	PPARGC1A	0.714	1
ELF3	SSH3	0.714	1
GTF2I	HIST1H2AG	0.714	1
GTF2I	NHLRC1	0.714	1
GTF2I	TGIF2LX	0.714	1
GTF2I	IL10RB	0.714	1
GTF2I	PHLDA3	0.714	1
GTF2I	SNRPB	0.714	1
GTF2I	TAF11	0.714	1
GTF2I	SCARF2	0.714	1
GTF2I	Del_3p14.2	0.714	1
HIST1H2AG	NEK11	0.714	1
HIST1H2AG	PPARGC1A	0.714	1
HIST1H2AG	SSH3	0.714	1
HIST1H2AG	DNAH6	0.714	1
NF2	Amp_10p14	0.714	1
NHLRC1	ITGA4	0.714	1
NHLRC1	NEK11	0.714	1
NHLRC1	PPARGC1A	0.714	1
NHLRC1	SSH3	0.714	1
NHLRC1	TXNIP	0.714	1
TGIF2LX	DNAH6	0.714	1
CCNE2	ITGA4	0.714	1
CCNE2	SSH3	0.714	1
CCNE2	TXNIP	0.714	1
CPD	Del_2q34	0.714	1
CPD	Del_19p13.3	0.714	1
IL10RB	ITGA4	0.714	1
IL10RB	PPARGC1A	0.714	1
IL10RB	SSH3	0.714	1
ITGA4	PHLDA3	0.714	1
ITGA4	SNRPB	0.714	1
ITGA4	SCARF2	0.714	1
ITGA4	19p-Del	0.714	1
ITGA4	Del_3p14.2	0.714	1
LETMD1	NEK11	0.714	1
LETMD1	PPARGC1A	0.714	1
LETMD1	DNAH6	0.714	1
NEK11	PHLDA3	0.714	1
NEK11	SNRPB	0.714	1
NEK11	Amp_17q23.3	0.714	1
PARD3	Amp_3p25.2	0.714	1
PHLDA3	SSH3	0.714	1
PHLDA3	TXNIP	0.714	1
PHLDA3	DNAH6	0.714	1
PPARGC1A	SNRPB	0.714	1
PPARGC1A	19p-Del	0.714	1
PPARGC1A	Del_3p14.2	0.714	1
PSMC6	Amp_10p14	0.714	1
SF3B3	11q-Del	0.714	1
SF3B3	5q-Del	0.714	1
SNRPB	TXNIP	0.714	1
SSH3	Amp_17q23.3	0.714	1
SSH3	Del_3p14.2	0.714	1
TAF11	TXNIP	0.714	1
TRERF1	Del_19p13.3	0.714	1
TXNIP	SCARF2	0.714	1
TXNIP	19p-Del	0.714	1
CNOT1	Del_2q34	0.714	1
DNAH6	19p-Del	0.714	1
ASXL2	Del_2q22.1	0.715	1
ELF3	POTEG	0.715	1
ELF3	UGP2	0.715	1
IDH1	Amp_1q21.3	0.715	1
IDH1	Del_3p14.2	0.715	1
POTEG	Amp_17q23.3	0.715	1
RHOA	7p-Amp	0.715	1
SARNP	Del_3p14.2	0.715	1
SHANK1	7p-Amp	0.715	1
TBC1D12	Del_11p15.5	0.715	1
TP53	Amp_19q13.43	0.715	1
ZFP36L1	Del_8p23.3	0.715	1
ZFP36L2	5p-Amp	0.715	1
ZNF180	Del_2q22.1	0.715	1
ZNF486	Amp_17q23.3	0.715	1
ZNF486	Del_3p14.2	0.715	1
DDX3X	Amp_8p11.21	0.715	1
NAA15	Del_2q22.1	0.715	1
NDC80	Amp_8p11.21	0.715	1
NDC80	Del_2q22.1	0.715	1
OR10Z1	Amp_17q23.3	0.715	1
OR10Z1	Del_3p14.2	0.715	1
PPARGC1A	Amp_10p14	0.715	1
RARG	Amp_8p11.21	0.715	1
RIPK4	5p-Amp	0.715	1
SLC9A4	5p-Amp	0.715	1
UGP2	Amp_17q23.3	0.715	1
ZNF626	5p-Amp	0.715	1
DNAH6	Amp_10p14	0.715	1
ELF3	Amp_17q23.3	0.716	1
ATAD5	Amp_20q11.21	0.716	1
Amp_1q23.3	Amp_13q22.1	0.716	1
Del_11q23.3	Del_13q14.2	0.716	1
CDKN2A	ERBB3	0.717	1
DIAPH2	PLCXD3	0.717	1
DIAPH2	AGR3	0.717	1
DIAPH2	RBP2	0.717	1
DIAPH2	ADC	0.717	1
DIAPH2	DAZAP1	0.717	1
ERBB3	KPTN	0.717	1
ERCC2	Del_17p12	0.717	1
HRAS	Del_6p25.3	0.717	1
HRAS	Del_16q23.1	0.717	1
PLCXD3	RBM10	0.717	1
PLCXD3	TRERF1	0.717	1
PLCXD3	CNOT1	0.717	1
ZFP36L2	Del_16q23.1	0.717	1
ACTB	Del_6p25.3	0.717	1
AGR3	TRERF1	0.717	1
AGR3	FAM47C	0.717	1
CPD	RBP2	0.717	1
CPD	ADC	0.717	1
PPARGC1A	Del_8p23.3	0.717	1
RBM10	RBP2	0.717	1
RBM10	DAZAP1	0.717	1
RBP2	TRERF1	0.717	1
RBP2	CNOT1	0.717	1
RBP2	FAM47C	0.717	1
RIPK4	Amp_12q15	0.717	1
SF3B3	DAZAP1	0.717	1
SLC9A4	Amp_12q15	0.717	1
SLC9A4	Del_16q23.1	0.717	1
TRERF1	ADC	0.717	1
TRERF1	DAZAP1	0.717	1
ADC	CNOT1	0.717	1
CUL1	Amp_13q22.1	0.717	1
DAZAP1	FAM47C	0.717	1
CTNNB1	IDH1	0.718	1
CTNNB1	PIGS	0.718	1
CTNNB1	SARNP	0.718	1
CTNNB1	OR10Z1	0.718	1
CTNNB1	UGP2	0.718	1
EP300	TMCO4	0.718	1
EP300	17q-Amp	0.718	1
FBXW7	CDKN2AIPNL	0.718	1
FOXA1	IDH1	0.718	1
FOXA1	PIGS	0.718	1
FOXA1	ZNF486	0.718	1
FOXA1	OR10Z1	0.718	1
FOXA1	UGP2	0.718	1
FOXA1	FUS	0.718	1
FOXQ1	IDH1	0.718	1
FOXQ1	SARNP	0.718	1
FOXQ1	ZNF486	0.718	1
FOXQ1	OR10Z1	0.718	1
FOXQ1	FUS	0.718	1
GPR50	IDH1	0.718	1
GPR50	PIGS	0.718	1
GPR50	OR10Z1	0.718	1
GPR50	FUS	0.718	1
IDH1	KRAS	0.718	1
IDH1	PTEN	0.718	1
IDH1	RUNX1	0.718	1
IDH1	CASP8	0.718	1
IDH1	DCDC1	0.718	1
IDH1	EXOSC10	0.718	1
IDH1	IKZF2	0.718	1
IDH1	ZNF750	0.718	1
IDH1	BAP1	0.718	1
IDH1	CDH1	0.718	1
IDH1	Del_1p36.11	0.718	1
KRAS	PIGS	0.718	1
KRAS	ZNF486	0.718	1
KRAS	OR10Z1	0.718	1
KRAS	FUS	0.718	1
METTL3	NRAS	0.718	1
METTL3	GLTP	0.718	1
METTL3	HLA-A	0.718	1
METTL3	UNC93B1	0.718	1
NFE2L3	ZNF486	0.718	1
NFE2L3	OR10Z1	0.718	1
NFE2L3	UGP2	0.718	1
NRAS	RHOA	0.718	1
NRAS	SHANK1	0.718	1
PIGS	PTEN	0.718	1
PIGS	CASP8	0.718	1
PIGS	DCDC1	0.718	1
PIGS	EXOSC10	0.718	1
PIGS	IKZF2	0.718	1
PIGS	ZNF750	0.718	1
PIK3CA	TSC1	0.718	1
PKHD1	CDKN2AIPNL	0.718	1
POTEG	PTEN	0.718	1
POTEG	RUNX1	0.718	1
POTEG	DCDC1	0.718	1
POTEG	EXOSC10	0.718	1
POTEG	WAC	0.718	1
POTEG	ZNF750	0.718	1
POTEG	BAP1	0.718	1
POTEG	EPS8	0.718	1
POTEG	1q-Amp	0.718	1
POTEG	Del_1p36.11	0.718	1
PTEN	ZNF486	0.718	1
PTEN	OR10Z1	0.718	1
PTEN	FUS	0.718	1
RHOA	UBA52	0.718	1
RHOA	ZBTB47	0.718	1
RHOA	HLA-A	0.718	1
RHOA	UNC93B1	0.718	1
RUNX1	SARNP	0.718	1
RUNX1	OR10Z1	0.718	1
RUNX1	UGP2	0.718	1
RUNX1	FUS	0.718	1
SARNP	DCDC1	0.718	1
SARNP	EXOSC10	0.718	1
SARNP	IKZF2	0.718	1
SARNP	ZNF750	0.718	1
SARNP	Del_1p36.11	0.718	1
SHANK1	GLTP	0.718	1
SHANK1	ZBTB47	0.718	1
ZFP36L1	Del_2q37.1	0.718	1
ZNF486	CASP8	0.718	1
ZNF486	WAC	0.718	1
ZNF486	BAP1	0.718	1
ZNF486	CDH1	0.718	1
ZNF486	EPS8	0.718	1
ZNF486	1q-Amp	0.718	1
ZNF486	Del_1p36.11	0.718	1
ATAD5	CDKN2AIPNL	0.718	1
CASP8	OR10Z1	0.718	1
CDKN2AIPNL	Amp_16p13.2	0.718	1
DCDC1	UGP2	0.718	1
EXOSC10	UGP2	0.718	1
EXOSC10	FUS	0.718	1
IKZF2	OR10Z1	0.718	1
IKZF2	UGP2	0.718	1
IKZF2	FUS	0.718	1
OR10Z1	THRAP3	0.718	1
OR10Z1	ZNF750	0.718	1
OR10Z1	BAP1	0.718	1
OR10Z1	EPS8	0.718	1
OR10Z1	1q-Amp	0.718	1
THRAP3	UGP2	0.718	1
THRAP3	FUS	0.718	1
UGP2	WAC	0.718	1
UGP2	BAP1	0.718	1
UGP2	CDH1	0.718	1
UGP2	EPS8	0.718	1
UGP2	1q-Amp	0.718	1
UGP2	Del_1p36.11	0.718	1
BAP1	FUS	0.718	1
FUS	1q-Amp	0.718	1
FUS	Del_1p36.11	0.718	1
GNA13	17p-Del	0.718	1
SPTAN1	10q-Del	0.718	1
SPTAN1	6q-Del	0.718	1
SPTAN1	Amp_19q12	0.718	1
ZNF185	Amp_22q12.2	0.718	1
17q-Amp	11p-Del	0.718	1
6q-Del	Amp_7p11.2	0.718	1
CDKN1A	Amp_6p22.3	0.719	1
CFHR4	TP53	0.719	1
ERBB3	MIPOL1	0.719	1
ERBB3	ZNF511	0.719	1
ERBB3	NKX2-2	0.719	1
FGFR3	HFM1	0.719	1
FGFR3	OGDH	0.719	1
STAG2	KDM5A	0.719	1
EPHA2	Amp_8p11.23	0.719	1
NCOA1	Amp_8p11.23	0.719	1
8q-Amp	Amp_1q23.3	0.719	1
5q-Del	Amp_6p22.3	0.719	1
Del_12p13.1	Del_13q14.2	0.719	1
ASXL2	Del_14q24.1	0.72	1
CNNM4	Del_2q37.1	0.72	1
DIAPH2	Amp_10p14	0.72	1
FGFR3	PROS1	0.72	1
FGFR3	Del_Xp11.3	0.72	1
GPS2	Del_2q37.1	0.72	1
RHOB	Del_10q23.31	0.72	1
STAG2	CTCF	0.72	1
STAG2	USP28	0.72	1
TP53	Del_15q13.1	0.72	1
ZNF511	Del_2q37.1	0.72	1
HSP90AA1	Amp_20q11.21	0.72	1
MARK2	Del_16p13.3	0.72	1
PPP4R1	Del_16p13.3	0.72	1
USP28	Amp_8p11.23	0.72	1
USP28	Del_16p13.3	0.72	1
Amp_7p11.2	Del_16p13.3	0.72	1
Amp_13q22.1	Del_2q22.1	0.72	1
Amp_17q12	Del_14q24.1	0.72	1
ATM	15q-Del	0.721	1
C3orf70	SF3B1	0.721	1
FOXA1	Del_11p15.5	0.721	1
FOXQ1	Del_11p15.5	0.721	1
GPR50	Del_11p15.5	0.721	1
HIST1H2AG	Del_2q34	0.721	1
HIST1H3B	Amp_19q13.43	0.721	1
HRAS	SF3B1	0.721	1
HRAS	MYO16	0.721	1
HRAS	16p-Del	0.721	1
NFE2L2	ACTB	0.721	1
NFE2L2	3p-Amp	0.721	1
NFE2L3	Del_11p15.5	0.721	1
PROS1	Amp_1q23.3	0.721	1
RUNX1	Del_11p15.5	0.721	1
RXRA	RIPK4	0.721	1
SF3B1	ACTB	0.721	1
SF3B1	SLC9A4	0.721	1
SF3B1	3p-Amp	0.721	1
TSC1	ASXL1	0.721	1
ZFP36L2	MYO16	0.721	1
ZFP36L2	16p-Del	0.721	1
ACTB	MYO16	0.721	1
ACTB	22q-Del	0.721	1
DENND5B	Del_9p23	0.721	1
DPYS	Amp_1q21.3	0.721	1
PHLDA3	Del_2q34	0.721	1
PPP4R1	Amp_1q23.3	0.721	1
RIPK4	22q-Del	0.721	1
SLC9A4	Amp_11q22.2	0.721	1
SNRPB	Del_2q34	0.721	1
ZNF626	22q-Del	0.721	1
ZNF626	Amp_11q22.2	0.721	1
CUL1	Amp_11q22.2	0.721	1
GNA13	Amp_19q13.43	0.721	1
SCARF2	Del_2q34	0.721	1
TMCO4	Amp_19q13.43	0.721	1
3p-Amp	16p-Del	0.721	1
7q-Amp	Del_9p23	0.721	1
15q-Del	Del_9p23	0.721	1
18q-Del	Amp_11q13.3	0.721	1
9p-Del	Amp_8p11.23	0.721	1
9p-Del	Del_16p13.3	0.721	1
Amp_1q21.3	Del_Xp11.3	0.721	1
Amp_19q13.43	Del_Xq21.33	0.721	1
ARID1A	HORMAD1	0.722	1
ARID1A	ZBTB7B	0.722	1
ARID1A	PSMC6	0.722	1
EP300	PARD3	0.722	1
ERBB3	8q-Amp	0.722	1
HORMAD1	Del_4q22.1	0.722	1
KLF5	Amp_17q23.3	0.722	1
NF2	Amp_5p15.33	0.722	1
NFE2L2	Del_9p23	0.722	1
PIGS	Amp_6p22.3	0.722	1
POTEG	Amp_6p22.3	0.722	1
RPTN	Del_17p12	0.722	1
TP53	Del_5q12.1	0.722	1
TSC1	Del_4q34.2	0.722	1
ZBTB7B	Amp_5p15.33	0.722	1
FAT1	5q-Del	0.722	1
NDC80	Del_17p12	0.722	1
PSMC6	Amp_5p15.33	0.722	1
RARG	Del_17p12	0.722	1
CNOT3	Amp_5p15.33	0.722	1
CNOT3	Del_4q22.1	0.722	1
FUS	Amp_6p22.3	0.722	1
8q-Amp	Del_11q25	0.722	1
5q-Del	Del_11q23.3	0.722	1
6q-Del	Amp_3p25.2	0.722	1
Amp_11q22.2	Del_9p23	0.722	1
ATM	Del_18q23	0.723	1
ERBB2	ASXL1	0.723	1
ERBB2	Del_12p13.1	0.723	1
GPR50	ZFP36L1	0.723	1
KRAS	ZFP36L1	0.723	1
RB1	Amp_22q12.2	0.723	1
RUNX1	ARID2	0.723	1
RUNX1	Amp_1p34.2	0.723	1
SF3B1	Amp_7p11.2	0.723	1
ZFP36L1	EXOSC10	0.723	1
ZFP36L1	WAC	0.723	1
ZFP36L1	ZNF750	0.723	1
ZFP36L1	1q-Amp	0.723	1
ARID2	EXOSC10	0.723	1
ARID2	BAP1	0.723	1
IKZF2	Amp_1p34.2	0.723	1
MYO16	Amp_7p11.2	0.723	1
THRAP3	Amp_1p34.2	0.723	1
20p-Amp	Del_11q23.3	0.723	1
8p-Del	Amp_6q21	0.723	1
9p-Del	Amp_22q12.2	0.723	1
Amp_8p11.23	Amp_22q12.2	0.723	1
Amp_19q12	Del_12p13.1	0.723	1
ERCC2	HFM1	0.724	1
ERCC2	KDM5A	0.724	1
KDM6A	PKHD1	0.724	1
PKHD1	Amp_19q13.43	0.724	1
PLCXD3	Amp_8q22.3	0.724	1
PSIP1	RB1	0.724	1
RB1	DENND5B	0.724	1
RB1	15q-Del	0.724	1
RHOB	Amp_6p22.3	0.724	1
RPTN	CDK12	0.724	1
RPTN	14q-Del	0.724	1
ZNF180	14q-Del	0.724	1
ZNF180	4p-Del	0.724	1
CDK12	NAA15	0.724	1
CDK12	Amp_4q13.3	0.724	1
DDX3X	4p-Del	0.724	1
DLX6	Amp_6p22.3	0.724	1
NAA15	14q-Del	0.724	1
PPP4R1	Del_9p21.3	0.724	1
RARG	4p-Del	0.724	1
RBM26	9p-Del	0.724	1
RBP2	Amp_8q22.3	0.724	1
USP28	Del_9p21.3	0.724	1
DAZAP1	Amp_8q22.3	0.724	1
FUT5	Amp_6p22.3	0.724	1
ZNF185	Amp_6p22.3	0.724	1
8q-Amp	5q-Del	0.724	1
14q-Del	Amp_4q13.3	0.724	1
4p-Del	Amp_4q13.3	0.724	1
ASXL2	7q-Amp	0.725	1
KDM6A	Del_16p13.3	0.725	1
NF1	SF3B1	0.725	1
NF1	22q-Del	0.725	1
DENND5B	Amp_17q12	0.725	1
TXNIP	8p-Del	0.725	1
DNAH6	8p-Del	0.725	1
7p-Amp	Del_11p15.5	0.725	1
7q-Amp	Amp_17q12	0.725	1
CFHR4	PKHD1	0.726	1
ERBB2	ZFP36L1	0.726	1
ERBB2	DDX3X	0.726	1
ERBB2	NDC80	0.726	1
ERBB2	19q-Amp	0.726	1
FBXW7	CTCF	0.726	1
FBXW7	DPYS	0.726	1
FBXW7	MARK2	0.726	1
NF1	CDKN2AIPNL	0.726	1
PIK3CA	Amp_3q26.33	0.726	1
PIK3CA	Del_10q23.31	0.726	1
PKHD1	DPYS	0.726	1
PKHD1	Del_Xp11.3	0.726	1
RB1	17p-Del	0.726	1
RPTN	Amp_19q12	0.726	1
RXRA	Del_9p21.3	0.726	1
SF3B1	Del_9p21.3	0.726	1
TP53	17p-Del	0.726	1
ZNF180	Amp_19q12	0.726	1
ATAD5	DPYS	0.726	1
ATAD5	MBD1	0.726	1
ATAD5	PPARG	0.726	1
ATAD5	USP28	0.726	1
ATAD5	Del_Xp11.3	0.726	1
CTCF	Amp_16p13.2	0.726	1
DDX3X	Amp_19q12	0.726	1
DPYS	MED13	0.726	1
DPYS	Amp_16p13.2	0.726	1
MBD1	Amp_16p13.2	0.726	1
MED13	PPARG	0.726	1
MED13	PPP4R1	0.726	1
MED13	USP28	0.726	1
NDC80	Amp_19q12	0.726	1
PPP4R1	Amp_16p13.2	0.726	1
CREBBP	Del_4q22.1	0.727	1
ERBB2	Del_2q34	0.727	1
AGR3	Amp_10p14	0.727	1
FAT1	RBM10	0.727	1
FAT1	SF3B3	0.727	1
FAT1	FAM47C	0.727	1
RBP2	Amp_10p14	0.727	1
ADC	Amp_10p14	0.727	1
FAM47C	20q-Amp	0.727	1
TMCO4	Del_18q23	0.727	1
17q-Amp	Del_18q23	0.727	1
Amp_19q12	Del_2q34	0.727	1
Del_1q32.1	Del_18q23	0.727	1
Del_18q23	Del_Xq21.33	0.727	1
ARID1A	Amp_10p14	0.728	1
EP300	Del_3p14.2	0.728	1
HIST1H3B	Del_9p23	0.728	1
HORMAD1	NF2	0.728	1
HORMAD1	ZBTB7B	0.728	1
HORMAD1	STK32B	0.728	1
HORMAD1	CNOT3	0.728	1
KDM6A	ZFP36L2	0.728	1
KDM6A	ACTB	0.728	1
KDM6A	RIPK4	0.728	1
NF2	ZBTB7B	0.728	1
NF2	PSMC6	0.728	1
NFE2L2	DLX6	0.728	1
NFE2L2	FUT5	0.728	1
NFE2L2	ZNF185	0.728	1
RXRA	DLX6	0.728	1
RXRA	FUT5	0.728	1
RXRA	ZNF185	0.728	1
SF3B1	DLX6	0.728	1
SF3B1	FUT5	0.728	1
SF3B1	ZNF185	0.728	1
ZBTB7B	STK32B	0.728	1
ZBTB7B	CNOT3	0.728	1
DLX6	MYO16	0.728	1
DLX6	16p-Del	0.728	1
DLX6	22q-Del	0.728	1
DLX6	Amp_11q22.2	0.728	1
MYO16	FUT5	0.728	1
MYO16	ZNF185	0.728	1
PSMC6	CNOT3	0.728	1
PSMC6	Amp_6q21	0.728	1
STK32B	CNOT3	0.728	1
STK32B	Amp_6q21	0.728	1
CNOT3	ZNF773	0.728	1
CNOT3	Amp_6q21	0.728	1
FUT5	16p-Del	0.728	1
FUT5	Amp_11q22.2	0.728	1
GNA13	Del_9p23	0.728	1
ZNF185	16p-Del	0.728	1
ZNF185	22q-Del	0.728	1
ZNF185	Amp_11q22.2	0.728	1
BTG2	FAT1	0.729	1
BTG2	20q-Amp	0.729	1
C12orf43	FAT1	0.729	1
C12orf43	20q-Amp	0.729	1
C3orf70	Amp_1q21.3	0.729	1
EP300	Amp_1q21.3	0.729	1
FBXW7	STAG2	0.729	1
GTF2I	Amp_22q12.2	0.729	1
HIST1H2AG	FAT1	0.729	1
HIST1H2AG	20q-Amp	0.729	1
KDM6A	Amp_8q22.3	0.729	1
PLCXD3	DENND5B	0.729	1
PLCXD3	7q-Amp	0.729	1
PLCXD3	15q-Del	0.729	1
POTEG	Amp_20q11.21	0.729	1
PSIP1	15q-Del	0.729	1
RB1	Amp_4q13.3	0.729	1
RB1	Del_7q36.3	0.729	1
RPTN	9p-Del	0.729	1
STAG2	MED13	0.729	1
TGIF2LX	Del_11q23.3	0.729	1
ZFP36L2	Amp_1q21.3	0.729	1
ZNF486	Amp_20q11.21	0.729	1
ACTB	Amp_1q21.3	0.729	1
AGR3	7q-Amp	0.729	1
AGR3	15q-Del	0.729	1
CCNE2	FAT1	0.729	1
CCNE2	20q-Amp	0.729	1
CTCF	Amp_6p22.3	0.729	1
DENND5B	RBM26	0.729	1
DENND5B	RBP2	0.729	1
DENND5B	ADC	0.729	1
DENND5B	7q-Amp	0.729	1
DENND5B	15q-Del	0.729	1
DLX6	Amp_20q11.21	0.729	1
FAT1	IL10RB	0.729	1
FAT1	SCARF2	0.729	1
LETMD1	Del_11q23.3	0.729	1
MARK2	Amp_6p22.3	0.729	1
OR10Z1	Amp_20q11.21	0.729	1
PHLDA3	20q-Amp	0.729	1
RBM26	RBP2	0.729	1
RBM26	DAZAP1	0.729	1
RBM26	7q-Amp	0.729	1
RBM26	15q-Del	0.729	1
RBP2	15q-Del	0.729	1
RIPK4	Amp_1q21.3	0.729	1
TAF11	Del_11q23.3	0.729	1
TXNIP	Amp_22q12.2	0.729	1
ZNF626	Amp_1q21.3	0.729	1
ADC	7q-Amp	0.729	1
CNOT1	Amp_19q13.43	0.729	1
DAZAP1	7q-Amp	0.729	1
DNAH6	Amp_22q12.2	0.729	1
FAM47C	Amp_19q13.43	0.729	1
SCARF2	20q-Amp	0.729	1
ZNF185	Amp_20q11.21	0.729	1
3p-Amp	Amp_1q21.3	0.729	1
17p-Del	Amp_1q21.3	0.729	1
Amp_19q13.43	Del_2q34	0.729	1
ARID1A	SHANK1	0.73	1
ARID1A	ARID2	0.73	1
ARID1A	Amp_7p11.2	0.73	1
BTG2	NDC80	0.73	1
BTG2	Amp_4q13.3	0.73	1
BTG2	Del_7q36.3	0.73	1
C12orf43	DDX3X	0.73	1
C12orf43	NDC80	0.73	1
C12orf43	19q-Amp	0.73	1
C12orf43	Del_7q36.3	0.73	1
CNNM4	HIST1H3B	0.73	1
CNNM4	GNA13	0.73	1
CNNM4	TMCO4	0.73	1
CNNM4	17q-Amp	0.73	1
CNNM4	Del_Xq21.33	0.73	1
COPZ2	18q-Del	0.73	1
CSMD3	NRAS	0.73	1
CSMD3	UBA52	0.73	1
DIAPH2	EPHA2	0.73	1
DIAPH2	KDM5A	0.73	1
DIAPH2	NCOA1	0.73	1
DIAPH2	OGDH	0.73	1
GPR50	Del_2q34	0.73	1
GPS2	HIST1H3B	0.73	1
GPS2	TMCO4	0.73	1
GPS2	17q-Amp	0.73	1
HIST1H2AG	DDX3X	0.73	1
HIST1H2AG	NAA15	0.73	1
HIST1H2AG	RARG	0.73	1
HIST1H2AG	19q-Amp	0.73	1
HIST1H2AG	Del_7q36.3	0.73	1
HIST1H3B	TFG	0.73	1
KLF5	ATAD5	0.73	1
KPTN	18q-Del	0.73	1
KRAS	Del_2q34	0.73	1
MIPOL1	GNA13	0.73	1
NHLRC1	RPTN	0.73	1
NHLRC1	NDC80	0.73	1
NHLRC1	19q-Amp	0.73	1
NHLRC1	Del_7q36.3	0.73	1
PTTG1IP	18q-Del	0.73	1
PTTG1IP	Del_14q24.1	0.73	1
RPTN	TGIF2LX	0.73	1
RPTN	LETMD1	0.73	1
RPTN	PHLDA3	0.73	1
RPTN	SNRPB	0.73	1
RPTN	SCARF2	0.73	1
RPTN	19p-Del	0.73	1
RUNX1	Del_2q34	0.73	1
SF1	GNA13	0.73	1
SF1	TMCO4	0.73	1
SF1	17q-Amp	0.73	1
SF1	Del_1q32.1	0.73	1
SF1	Del_Xq21.33	0.73	1
TGIF2LX	ZNF180	0.73	1
TGIF2LX	DDX3X	0.73	1
TGIF2LX	NAA15	0.73	1
TGIF2LX	RARG	0.73	1
TGIF2LX	19q-Amp	0.73	1
ZFP36L2	20p-Amp	0.73	1
ZFP36L2	Del_22q13.32	0.73	1
ZNF180	IL10RB	0.73	1
ZNF180	PHLDA3	0.73	1
ZNF180	SNRPB	0.73	1
ZNF180	19p-Del	0.73	1
ZNF511	TMCO4	0.73	1
ZNF511	17q-Amp	0.73	1
ZNF511	Del_1q32.1	0.73	1
ACTB	20p-Amp	0.73	1
ACTB	Del_22q13.32	0.73	1
ARID2	Amp_17q12	0.73	1
ATAD5	4q-Del	0.73	1
CCNE2	19q-Amp	0.73	1
CCNE2	Del_7q36.3	0.73	1
CPD	EPHA2	0.73	1
CPD	KDM5A	0.73	1
DCDC1	Del_2q34	0.73	1
DDX3X	LETMD1	0.73	1
DDX3X	SNRPB	0.73	1
DDX3X	SCARF2	0.73	1
DDX3X	19p-Del	0.73	1
EPHA2	RBM10	0.73	1
EPHA2	SF3B3	0.73	1
EPHA2	CNOT1	0.73	1
HFM1	FAM47C	0.73	1
IL10RB	NDC80	0.73	1
IL10RB	19q-Amp	0.73	1
IL10RB	Amp_4q13.3	0.73	1
IL10RB	Del_7q36.3	0.73	1
KDM5A	CNOT1	0.73	1
KDM5A	FAM47C	0.73	1
LETMD1	NDC80	0.73	1
LETMD1	19q-Amp	0.73	1
LETMD1	Del_7q36.3	0.73	1
MED13	7p-Amp	0.73	1
MED13	4q-Del	0.73	1
NAA15	SNRPB	0.73	1
NAA15	TAF11	0.73	1
NAA15	SCARF2	0.73	1
NAA15	19p-Del	0.73	1
NDC80	SNRPB	0.73	1
NDC80	TAF11	0.73	1
NKX2-2	GNA13	0.73	1
NKX2-2	17q-Amp	0.73	1
NKX2-2	Del_1q32.1	0.73	1
PARD3	Amp_16p13.2	0.73	1
PHLDA3	19q-Amp	0.73	1
PHLDA3	Amp_4q13.3	0.73	1
PHLDA3	Del_7q36.3	0.73	1
RBM10	Amp_4p16.3	0.73	1
SF3B3	OGDH	0.73	1
SLC9A4	20p-Amp	0.73	1
SNRPB	Amp_4q13.3	0.73	1
TAF11	19q-Amp	0.73	1
TAF11	Amp_4q13.3	0.73	1
TAF11	Del_7q36.3	0.73	1
TFG	GNA13	0.73	1
TFG	17q-Amp	0.73	1
TFG	Del_1q32.1	0.73	1
ZNF626	20p-Amp	0.73	1
ZNF626	Del_22q13.32	0.73	1
CNOT1	OGDH	0.73	1
CNOT1	Amp_4p16.3	0.73	1
FAM47C	Amp_4p16.3	0.73	1
SCARF2	19q-Amp	0.73	1
SCARF2	Amp_4q13.3	0.73	1
19q-Amp	19p-Del	0.73	1
20p-Amp	3p-Amp	0.73	1
20q-Amp	Amp_8p11.23	0.73	1
19p-Del	Amp_4q13.3	0.73	1
C3orf70	NRAS	0.731	1
C3orf70	GLTP	0.731	1
C3orf70	HLA-A	0.731	1
HRAS	NRAS	0.731	1
HRAS	UBA52	0.731	1
HRAS	ZBTB47	0.731	1
HRAS	HLA-A	0.731	1
KDM6A	UBA52	0.731	1
NRAS	ZFP36L2	0.731	1
NRAS	ACTB	0.731	1
NRAS	RIPK4	0.731	1
NRAS	SLC9A4	0.731	1
NRAS	ZNF626	0.731	1
NRAS	3p-Amp	0.731	1
ZBTB7B	9q-Del	0.731	1
ZFP36L2	GLTP	0.731	1
ZFP36L2	UNC93B1	0.731	1
ACTB	GLTP	0.731	1
ACTB	UBA52	0.731	1
ACTB	UNC93B1	0.731	1
GLTP	RIPK4	0.731	1
GLTP	SLC9A4	0.731	1
GLTP	CUL1	0.731	1
GLTP	3p-Amp	0.731	1
SLC9A4	ZBTB47	0.731	1
SLC9A4	UNC93B1	0.731	1
UBA52	CUL1	0.731	1
UBA52	3p-Amp	0.731	1
ZBTB47	ZNF626	0.731	1
ZBTB47	CUL1	0.731	1
ZBTB47	3p-Amp	0.731	1
ZNF626	HLA-A	0.731	1
ASXL1	5p-Amp	0.731	1
CUL1	UNC93B1	0.731	1
HLA-A	3p-Amp	0.731	1
Amp_1q21.3	Amp_12q15	0.731	1
SHANK1	Del_12p13.1	0.732	1
EPHA2	Del_2q37.1	0.732	1
OGDH	Del_2q37.1	0.732	1
3q-Amp	Del_10q23.31	0.732	1
Amp_13q22.1	Del_5q12.1	0.732	1
ASXL2	ZBTB7B	0.733	1
ASXL2	Amp_6q21	0.733	1
ELF3	NF1	0.733	1
GTF2I	Amp_1q23.3	0.733	1
HORMAD1	Amp_17q12	0.733	1
IDH1	Amp_7p11.2	0.733	1
NF2	Amp_17q12	0.733	1
PIGS	SPTAN1	0.733	1
PIGS	Amp_7p11.2	0.733	1
PLCXD3	8p-Del	0.733	1
POTEG	SPTAN1	0.733	1
POTEG	Amp_7p11.2	0.733	1
TSC1	5p-Amp	0.733	1
TSC1	Del_Xq21.33	0.733	1
ZNF486	Amp_7p11.2	0.733	1
ITGA4	Amp_1q23.3	0.733	1
RBP2	8p-Del	0.733	1
SSH3	Amp_1q23.3	0.733	1
UGP2	SPTAN1	0.733	1
ADC	8p-Del	0.733	1
CNOT3	Amp_17q12	0.733	1
DAZAP1	8p-Del	0.733	1
3q-Amp	Del_5q12.1	0.733	1
9q-Del	Del_15q13.1	0.733	1
Amp_6q21	Amp_17q12	0.733	1
CDKN2A	Del_17p12	0.734	1
FBXW7	Del_8p21.3	0.734	1
KLF5	Del_18q23	0.734	1
ZFP36L1	CDKN2AIPNL	0.734	1
PARD3	Del_18q23	0.734	1
CSMD3	Del_17p12	0.735	1
PKHD1	Amp_10p14	0.735	1
CDK12	Amp_3p25.2	0.735	1
NEK11	9q-Del	0.735	1
SSH3	Del_5q12.1	0.735	1
DNAH6	9q-Del	0.735	1
3q-Amp	Amp_13q22.1	0.735	1
Amp_12q15	Del_15q13.1	0.735	1
Del_6p25.3	Del_15q13.1	0.735	1
CFHR4	IDH1	0.736	1
CFHR4	ZNF486	0.736	1
CFHR4	OR10Z1	0.736	1
CFHR4	UGP2	0.736	1
CFHR4	FUS	0.736	1
COPZ2	ERCC2	0.736	1
EP300	ZFP36L2	0.736	1
EP300	RIPK4	0.736	1
ERBB3	Amp_8q22.3	0.736	1
ERCC2	PTTG1IP	0.736	1
FGFR3	Del_4q22.1	0.736	1
IDH1	PROS1	0.736	1
IDH1	CTCF	0.736	1
IDH1	DPYS	0.736	1
IDH1	PPARG	0.736	1
IDH1	Del_Xp11.3	0.736	1
PIGS	PROS1	0.736	1
PIGS	MARK2	0.736	1
PIGS	PPARG	0.736	1
PIGS	PPP4R1	0.736	1
PIGS	USP28	0.736	1
PIGS	Del_Xp11.3	0.736	1
POTEG	DPYS	0.736	1
POTEG	PPARG	0.736	1
POTEG	PPP4R1	0.736	1
PROS1	OR10Z1	0.736	1
PROS1	FUS	0.736	1
SARNP	DPYS	0.736	1
SARNP	MARK2	0.736	1
SARNP	MBD1	0.736	1
SARNP	PPARG	0.736	1
ZNF486	DPYS	0.736	1
ZNF486	MARK2	0.736	1
ZNF486	MBD1	0.736	1
ZNF486	USP28	0.736	1
ZNF486	Del_Xp11.3	0.736	1
CTCF	OR10Z1	0.736	1
CTCF	UGP2	0.736	1
DPYS	OR10Z1	0.736	1
DPYS	UGP2	0.736	1
DPYS	FUS	0.736	1
MARK2	UGP2	0.736	1
MARK2	FUS	0.736	1
MBD1	FUS	0.736	1
OR10Z1	PPARG	0.736	1
OR10Z1	PPP4R1	0.736	1
OR10Z1	USP28	0.736	1
PPARG	UGP2	0.736	1
PPP4R1	UGP2	0.736	1
PPP4R1	FUS	0.736	1
UGP2	USP28	0.736	1
UGP2	Del_Xp11.3	0.736	1
ZNF626	17p-Del	0.736	1
FUS	Del_Xp11.3	0.736	1
3p-Amp	17p-Del	0.736	1
Amp_1q23.3	Amp_8p11.23	0.736	1
BTG2	Del_2q22.1	0.737	1
C3orf70	KLF5	0.737	1
CFHR4	Amp_20q11.21	0.737	1
CREBBP	RARG	0.737	1
CREBBP	Amp_4q13.3	0.737	1
CREBBP	Amp_7p11.2	0.737	1
CREBBP	Del_7q36.3	0.737	1
FGFR3	UBA52	0.737	1
FGFR3	HLA-A	0.737	1
HRAS	7p-Amp	0.737	1
HRAS	4q-Del	0.737	1
KLF5	ACTB	0.737	1
KLF5	RIPK4	0.737	1
NRAS	Del_16p13.3	0.737	1
RPTN	Amp_7p21.1	0.737	1
STAG2	UBA52	0.737	1
STAG2	ZBTB47	0.737	1
STAG2	HLA-A	0.737	1
TBC1D12	DDX3X	0.737	1
TBC1D12	HSP90AA1	0.737	1
TBC1D12	RARG	0.737	1
TBC1D12	ASXL1	0.737	1
TBC1D12	19q-Amp	0.737	1
TBC1D12	Del_7q36.3	0.737	1
TGIF2LX	Del_2q22.1	0.737	1
ZFP36L2	ARID1B	0.737	1
ACTB	4q-Del	0.737	1
CCNE2	Amp_8p11.21	0.737	1
CCNE2	Del_2q22.1	0.737	1
DDX3X	Amp_7p21.1	0.737	1
DDX3X	Del_6q27	0.737	1
DPYS	Amp_20q11.21	0.737	1
GLTP	Del_16p13.3	0.737	1
HSP90AA1	3q-Amp	0.737	1
HSP90AA1	10q-Del	0.737	1
NAA15	Del_6q27	0.737	1
NDC80	Del_6q27	0.737	1
PPARGC1A	SPTAN1	0.737	1
RARG	Amp_7p21.1	0.737	1
RARG	Del_11q25	0.737	1
RIPK4	7p-Amp	0.737	1
SLC9A4	4q-Del	0.737	1
SNRPB	Amp_8p11.21	0.737	1
SNRPB	Del_2q22.1	0.737	1
SSH3	Amp_7p11.2	0.737	1
TAF11	Del_2q22.1	0.737	1
UBA52	Amp_8p11.23	0.737	1
ZBTB47	Del_16p13.3	0.737	1
ASXL1	Amp_7p21.1	0.737	1
CUL1	4q-Del	0.737	1
DNAH6	Amp_7p11.2	0.737	1
3p-Amp	4q-Del	0.737	1
6q-Del	Del_12p13.1	0.737	1
Amp_4q13.3	Del_6q27	0.737	1
Amp_7p21.1	Del_12p13.1	0.737	1
Amp_7p11.2	Del_11q25	0.737	1
Amp_20q11.21	Del_Xp11.3	0.737	1
Del_12p13.1	Del_15q13.1	0.737	1
CDKN2A	NAA15	0.738	1
CDKN2A	NDC80	0.738	1
CDKN2A	19q-Amp	0.738	1
CDKN2A	14q-Del	0.738	1
CDKN2A	Del_7q36.3	0.738	1
CREBBP	Del_8p21.3	0.738	1
ERBB2	Del_2q37.1	0.738	1
KLF5	DLX6	0.738	1
KLF5	FUT5	0.738	1
METTL3	18q-Del	0.738	1
NF1	PROS1	0.738	1
NF1	Del_Xp11.3	0.738	1
RHOA	18q-Del	0.738	1
RHOA	Del_14q24.1	0.738	1
RHOB	CDK12	0.738	1
RHOB	RARG	0.738	1
RHOB	14q-Del	0.738	1
SF3B1	Amp_12q15	0.738	1
SF3B1	Del_6p25.3	0.738	1
SHANK1	18q-Del	0.738	1
SHANK1	Del_14q24.1	0.738	1
DLX6	PARD3	0.738	1
DLX6	ARID1B	0.738	1
DLX6	4q-Del	0.738	1
EPHA2	Del_4q22.1	0.738	1
MYO16	Amp_13q22.1	0.738	1
MYO16	Del_16q23.1	0.738	1
NAA15	Del_9p21.3	0.738	1
PARD3	FUT5	0.738	1
ARID1B	ZNF185	0.738	1
ASXL1	Del_8p23.3	0.738	1
FUT5	7p-Amp	0.738	1
FUT5	4q-Del	0.738	1
ZNF185	4q-Del	0.738	1
11q-Del	Del_8p23.3	0.738	1
16p-Del	Amp_12q15	0.738	1
16p-Del	Amp_13q22.1	0.738	1
Amp_8p11.21	Del_19p13.3	0.738	1
Amp_11q22.2	Amp_12q15	0.738	1
Amp_19q12	Del_2q37.1	0.738	1
Del_7q36.3	Del_9p21.3	0.738	1
CNNM4	18q-Del	0.739	1
CNNM4	Del_14q24.1	0.739	1
ERBB2	Amp_12q15	0.739	1
ERBB2	Del_6p25.3	0.739	1
HORMAD1	Del_13q14.2	0.739	1
MIPOL1	Del_14q24.1	0.739	1
RHOB	8p-Del	0.739	1
SF1	18q-Del	0.739	1
SF1	Del_14q24.1	0.739	1
ZNF511	18q-Del	0.739	1
ZNF511	Del_14q24.1	0.739	1
ACTB	Amp_6p22.3	0.739	1
AGR3	Del_5q12.1	0.739	1
NKX2-2	18q-Del	0.739	1
PSMC6	Del_13q14.2	0.739	1
SF3B3	Amp_1q21.3	0.739	1
ADC	9q-Del	0.739	1
ADC	Del_5q12.1	0.739	1
FAM47C	Amp_1q21.3	0.739	1
ZNF773	Del_13q14.2	0.739	1
Amp_6q21	Del_13q14.2	0.739	1
Del_2q22.1	Del_13q14.2	0.739	1
CDKN1A	DENND5B	0.74	1
CSMD3	NFE2L2	0.74	1
DIAPH2	Del_2q22.1	0.74	1
PIK3CA	ITGA4	0.74	1
PIK3CA	PPARGC1A	0.74	1
PROS1	Amp_11q13.3	0.74	1
RHOB	Del_9p21.3	0.74	1
CTCF	Amp_11q13.3	0.74	1
CTCF	Del_10q23.31	0.74	1
DENND5B	11q-Del	0.74	1
DENND5B	5q-Del	0.74	1
DPYS	Del_10q23.31	0.74	1
MBD1	Del_10q23.31	0.74	1
PPP4R1	Amp_11q13.3	0.74	1
USP28	Amp_3q26.33	0.74	1
USP28	Amp_11q13.3	0.74	1
7q-Amp	11q-Del	0.74	1
Amp_3q26.33	Del_Xp11.3	0.74	1
CTNNB1	FAT1	0.741	1
CTNNB1	Del_11q23.3	0.741	1
ERCC2	14q-Del	0.741	1
FOXA1	20q-Amp	0.741	1
FOXQ1	FAT1	0.741	1
FOXQ1	20q-Amp	0.741	1
FOXQ1	Del_11q23.3	0.741	1
PIK3CA	PSIP1	0.741	1
PIK3CA	15q-Del	0.741	1
PLCXD3	NCOA1	0.741	1
PLCXD3	OGDH	0.741	1
PLCXD3	Amp_4p16.3	0.741	1
PTEN	Del_11q23.3	0.741	1
RUNX1	FAT1	0.741	1
RUNX1	20q-Amp	0.741	1
RUNX1	Del_11q23.3	0.741	1
AGR3	EPHA2	0.741	1
AGR3	KDM5A	0.741	1
AGR3	Amp_4p16.3	0.741	1
EPHA2	ADC	0.741	1
EPHA2	DAZAP1	0.741	1
EXOSC10	20q-Amp	0.741	1
EXOSC10	Del_11q23.3	0.741	1
FAT1	BAP1	0.741	1
FAT1	EPS8	0.741	1
FAT1	1q-Amp	0.741	1
HFM1	RBP2	0.741	1
HFM1	ADC	0.741	1
KDM5A	ADC	0.741	1
KDM5A	DAZAP1	0.741	1
NCOA1	RBP2	0.741	1
NCOA1	ADC	0.741	1
RBP2	OGDH	0.741	1
RBP2	Amp_4p16.3	0.741	1
WAC	20q-Amp	0.741	1
ADC	OGDH	0.741	1
20p-Amp	Amp_8p11.21	0.741	1
Amp_7p11.2	Amp_16p13.2	0.741	1
COPZ2	Del_4q22.1	0.742	1
CREBBP	Amp_1p34.2	0.742	1
ERBB3	HRAS	0.742	1
ERBB3	ZFP36L2	0.742	1
IDH1	Amp_12q15	0.742	1
IDH1	Amp_13q22.1	0.742	1
KPTN	Del_4q22.1	0.742	1
PIGS	Amp_12q15	0.742	1
PIGS	Del_6p25.3	0.742	1
PIGS	Del_16q23.1	0.742	1
POTEG	Amp_12q15	0.742	1
POTEG	Del_16q23.1	0.742	1
PTTG1IP	Del_4q22.1	0.742	1
RXRA	Amp_1p34.2	0.742	1
SARNP	Amp_12q15	0.742	1
SARNP	Del_16q23.1	0.742	1
SF3B1	ARID2	0.742	1
TBC1D12	Amp_1p34.2	0.742	1
TGIF2LX	Del_9p23	0.742	1
ZFP36L1	22q-Del	0.742	1
ZFP36L1	Del_11q25	0.742	1
ZNF486	Amp_13q22.1	0.742	1
ZNF486	Del_6p25.3	0.742	1
ARID2	22q-Del	0.742	1
HFM1	Amp_3q26.33	0.742	1
KDM5A	Del_10q23.31	0.742	1
NCOA1	Amp_3q26.33	0.742	1
OR10Z1	Amp_13q22.1	0.742	1
OR10Z1	Del_16q23.1	0.742	1
PHLDA3	Del_9p23	0.742	1
UGP2	Amp_12q15	0.742	1
UGP2	Del_6p25.3	0.742	1
FUS	Amp_12q15	0.742	1
FUS	Amp_13q22.1	0.742	1
FUS	Del_6p25.3	0.742	1
FUS	Del_16q23.1	0.742	1
SCARF2	Del_9p23	0.742	1
3q-Amp	10q-Del	0.742	1
ARID1A	CDKN2AIPNL	0.743	1
MIPOL1	RB1	0.743	1
NFE2L2	PIK3CA	0.743	1
PIK3CA	RXRA	0.743	1
PIK3CA	SF3B1	0.743	1
PIK3CA	Del_1q32.1	0.743	1
RB1	SF1	0.743	1
RB1	ZNF511	0.743	1
RHOA	Del_11p15.5	0.743	1
ZNF511	9p-Del	0.743	1
NKX2-2	9p-Del	0.743	1
RBM10	9q-Del	0.743	1
RBM10	Del_5q12.1	0.743	1
STK32B	Del_17p12	0.743	1
TFG	9p-Del	0.743	1
TRERF1	9q-Del	0.743	1
Amp_8p11.23	Amp_12q15	0.743	1
Amp_8p11.23	Del_6p25.3	0.743	1
Amp_13q22.1	Del_16p13.3	0.743	1
CDKN1A	HORMAD1	0.744	1
CDKN1A	PSMC6	0.744	1
CDKN1A	Amp_6q21	0.744	1
CSMD3	Amp_17q12	0.744	1
GTF2I	RXRA	0.744	1
GTF2I	22q-Del	0.744	1
HIST1H3B	3q-Amp	0.744	1
HIST1H3B	Del_15q13.1	0.744	1
HORMAD1	11q-Del	0.744	1
HORMAD1	Del_19p13.3	0.744	1
NF2	5q-Del	0.744	1
NFE2L2	ITGA4	0.744	1
NFE2L2	NEK11	0.744	1
NFE2L2	PPARGC1A	0.744	1
NFE2L2	SSH3	0.744	1
NFE2L2	TXNIP	0.744	1
RXRA	SSH3	0.744	1
SF3B1	ITGA4	0.744	1
SF3B1	NEK11	0.744	1
SF3B1	SSH3	0.744	1
TP53	MYO16	0.744	1
ZBTB7B	5q-Del	0.744	1
ITGA4	16p-Del	0.744	1
ITGA4	22q-Del	0.744	1
ITGA4	Amp_11q22.2	0.744	1
MYO16	PPARGC1A	0.744	1
MYO16	SSH3	0.744	1
NEK11	16p-Del	0.744	1
NEK11	22q-Del	0.744	1
PSMC6	11q-Del	0.744	1
SSH3	Amp_11q22.2	0.744	1
STK32B	5q-Del	0.744	1
STK32B	Del_19p13.3	0.744	1
CNOT3	5q-Del	0.744	1
CNOT3	Del_19p13.3	0.744	1
DNAH6	16p-Del	0.744	1
DNAH6	22q-Del	0.744	1
GNA13	3q-Amp	0.744	1
GNA13	Del_15q13.1	0.744	1
TMCO4	3q-Amp	0.744	1
TMCO4	6q-Del	0.744	1
ZNF773	5q-Del	0.744	1
ZNF773	Del_19p13.3	0.744	1
17q-Amp	Del_15q13.1	0.744	1
3q-Amp	Del_1q32.1	0.744	1
3q-Amp	Del_Xq21.33	0.744	1
10q-Del	Del_1q32.1	0.744	1
Amp_6q21	Del_19p13.3	0.744	1
Del_1q32.1	Del_15q13.1	0.744	1
DIAPH2	TSC1	0.745	1
ELF3	8q-Amp	0.745	1
ELF3	Del_18q23	0.745	1
ERBB2	TGIF2LX	0.745	1
ERBB2	IL10RB	0.745	1
ERBB2	LETMD1	0.745	1
ERBB2	TAF11	0.745	1
ERBB3	Del_17p12	0.745	1
GTF2I	NRAS	0.745	1
GTF2I	GLTP	0.745	1
GTF2I	ZBTB47	0.745	1
GTF2I	HLA-A	0.745	1
NRAS	NEK11	0.745	1
NRAS	PPARGC1A	0.745	1
NRAS	SSH3	0.745	1
PSIP1	Del_2q34	0.745	1
TGIF2LX	Amp_19q12	0.745	1
TP53	Del_6q27	0.745	1
TSC1	SF3B3	0.745	1
CCNE2	Amp_19q12	0.745	1
GLTP	SSH3	0.745	1
GLTP	TXNIP	0.745	1
ITGA4	HLA-A	0.745	1
ITGA4	Del_13q14.2	0.745	1
KDM5A	Amp_1q23.3	0.745	1
NEK11	HLA-A	0.745	1
NEK11	UNC93B1	0.745	1
PHLDA3	Amp_19q12	0.745	1
PPARGC1A	HLA-A	0.745	1
RBM26	Del_2q34	0.745	1
SNRPB	Amp_19q12	0.745	1
SSH3	ZBTB47	0.745	1
SSH3	HLA-A	0.745	1
SSH3	UNC93B1	0.745	1
SSH3	Del_13q14.2	0.745	1
TAF11	Amp_19q12	0.745	1
TXNIP	ZBTB47	0.745	1
TXNIP	HLA-A	0.745	1
DNAH6	HLA-A	0.745	1
DNAH6	UNC93B1	0.745	1
SCARF2	Amp_19q12	0.745	1
ZNF185	Amp_3p25.2	0.745	1
BTG2	FOXA1	0.746	1
BTG2	FOXQ1	0.746	1
BTG2	GPR50	0.746	1
BTG2	KRAS	0.746	1
BTG2	NFE2L3	0.746	1
BTG2	DCDC1	0.746	1
BTG2	EXOSC10	0.746	1
BTG2	IKZF2	0.746	1
BTG2	THRAP3	0.746	1
BTG2	BAP1	0.746	1
BTG2	CDH1	0.746	1
BTG2	EPS8	0.746	1
BTG2	1q-Amp	0.746	1
C12orf43	CTNNB1	0.746	1
C12orf43	GPR50	0.746	1
C12orf43	KRAS	0.746	1
C12orf43	PTEN	0.746	1
C12orf43	CASP8	0.746	1
C12orf43	DCDC1	0.746	1
C12orf43	EXOSC10	0.746	1
C12orf43	IKZF2	0.746	1
C12orf43	ZNF750	0.746	1
C12orf43	BAP1	0.746	1
C12orf43	CDH1	0.746	1
C12orf43	Del_1p36.11	0.746	1
CSMD3	17p-Del	0.746	1
CTNNB1	HIST1H2AG	0.746	1
CTNNB1	NHLRC1	0.746	1
CTNNB1	CCNE2	0.746	1
CTNNB1	PHLDA3	0.746	1
CTNNB1	SNRPB	0.746	1
CTNNB1	19p-Del	0.746	1
FOXA1	HIST1H2AG	0.746	1
FOXA1	NHLRC1	0.746	1
FOXA1	CCNE2	0.746	1
FOXA1	IL10RB	0.746	1
FOXA1	TAF11	0.746	1
FOXA1	SCARF2	0.746	1
FOXQ1	HIST1H2AG	0.746	1
FOXQ1	NHLRC1	0.746	1
FOXQ1	TGIF2LX	0.746	1
FOXQ1	LETMD1	0.746	1
FOXQ1	SNRPB	0.746	1
FOXQ1	SCARF2	0.746	1
GPR50	CCNE2	0.746	1
GPR50	IL10RB	0.746	1
GPR50	LETMD1	0.746	1
GPR50	SNRPB	0.746	1
GPR50	TAF11	0.746	1
GPR50	SCARF2	0.746	1
GPR50	19p-Del	0.746	1
HIST1H2AG	KRAS	0.746	1
HIST1H2AG	NFE2L3	0.746	1
HIST1H2AG	PTEN	0.746	1
HIST1H2AG	RUNX1	0.746	1
HIST1H2AG	CASP8	0.746	1
HIST1H2AG	EXOSC10	0.746	1
HIST1H2AG	THRAP3	0.746	1
HIST1H2AG	WAC	0.746	1
HIST1H2AG	ZNF750	0.746	1
HIST1H2AG	EPS8	0.746	1
HIST1H2AG	1q-Amp	0.746	1
HIST1H2AG	Del_1p36.11	0.746	1
KDM6A	Del_9p23	0.746	1
KRAS	NHLRC1	0.746	1
KRAS	CCNE2	0.746	1
KRAS	IL10RB	0.746	1
KRAS	LETMD1	0.746	1
KRAS	PHLDA3	0.746	1
KRAS	SNRPB	0.746	1
KRAS	TAF11	0.746	1
KRAS	SCARF2	0.746	1
NFE2L3	IL10RB	0.746	1
NFE2L3	LETMD1	0.746	1
NFE2L3	SNRPB	0.746	1
NFE2L3	TAF11	0.746	1
NHLRC1	PTEN	0.746	1
NHLRC1	DCDC1	0.746	1
NHLRC1	EXOSC10	0.746	1
NHLRC1	IKZF2	0.746	1
NHLRC1	THRAP3	0.746	1
NHLRC1	WAC	0.746	1
NHLRC1	BAP1	0.746	1
NHLRC1	CDH1	0.746	1
NHLRC1	1q-Amp	0.746	1
NHLRC1	Del_1p36.11	0.746	1
PTEN	CCNE2	0.746	1
PTEN	IL10RB	0.746	1
PTEN	LETMD1	0.746	1
PTEN	PHLDA3	0.746	1
PTEN	SNRPB	0.746	1
PTEN	TAF11	0.746	1
PTEN	19p-Del	0.746	1
RUNX1	TGIF2LX	0.746	1
RUNX1	CCNE2	0.746	1
RUNX1	PHLDA3	0.746	1
RUNX1	SNRPB	0.746	1
RUNX1	TAF11	0.746	1
RUNX1	SCARF2	0.746	1
RUNX1	19p-Del	0.746	1
TGIF2LX	DCDC1	0.746	1
TGIF2LX	EXOSC10	0.746	1
TGIF2LX	ZNF750	0.746	1
TGIF2LX	Del_1p36.11	0.746	1
AGR3	Del_13q14.2	0.746	1
CASP8	CCNE2	0.746	1
CASP8	PHLDA3	0.746	1
CASP8	SNRPB	0.746	1
CASP8	TAF11	0.746	1
CASP8	19p-Del	0.746	1
CCNE2	DCDC1	0.746	1
CCNE2	EXOSC10	0.746	1
CCNE2	IKZF2	0.746	1
CCNE2	BAP1	0.746	1
CCNE2	CDH1	0.746	1
CCNE2	Del_1p36.11	0.746	1
CDK12	5p-Amp	0.746	1
DCDC1	IL10RB	0.746	1
DCDC1	PHLDA3	0.746	1
DCDC1	TAF11	0.746	1
DCDC1	SCARF2	0.746	1
DCDC1	19p-Del	0.746	1
EXOSC10	IL10RB	0.746	1
EXOSC10	LETMD1	0.746	1
EXOSC10	PHLDA3	0.746	1
EXOSC10	TAF11	0.746	1
EXOSC10	SCARF2	0.746	1
EXOSC10	19p-Del	0.746	1
IKZF2	IL10RB	0.746	1
IKZF2	PHLDA3	0.746	1
IKZF2	SNRPB	0.746	1
IKZF2	TAF11	0.746	1
IKZF2	19p-Del	0.746	1
IL10RB	THRAP3	0.746	1
IL10RB	WAC	0.746	1
IL10RB	ZNF750	0.746	1
IL10RB	1q-Amp	0.746	1
IL10RB	Del_1p36.11	0.746	1
LETMD1	WAC	0.746	1
LETMD1	BAP1	0.746	1
LETMD1	EPS8	0.746	1
LETMD1	1q-Amp	0.746	1
LETMD1	Del_1p36.11	0.746	1
PHLDA3	WAC	0.746	1
PHLDA3	ZNF750	0.746	1
PHLDA3	BAP1	0.746	1
PHLDA3	CDH1	0.746	1
PHLDA3	EPS8	0.746	1
PHLDA3	1q-Amp	0.746	1
PHLDA3	Del_1p36.11	0.746	1
SNRPB	THRAP3	0.746	1
SNRPB	WAC	0.746	1
SNRPB	ZNF750	0.746	1
SNRPB	BAP1	0.746	1
SNRPB	CDH1	0.746	1
SNRPB	Del_1p36.11	0.746	1
TAF11	THRAP3	0.746	1
TAF11	WAC	0.746	1
TAF11	BAP1	0.746	1
TAF11	CDH1	0.746	1
TAF11	EPS8	0.746	1
TAF11	1q-Amp	0.746	1
TAF11	Del_1p36.11	0.746	1
THRAP3	19p-Del	0.746	1
WAC	SCARF2	0.746	1
WAC	19p-Del	0.746	1
ZNF750	SCARF2	0.746	1
ZNF750	19p-Del	0.746	1
ADC	Del_13q14.2	0.746	1
BAP1	SCARF2	0.746	1
BAP1	19p-Del	0.746	1
CDH1	SCARF2	0.746	1
CDH1	19p-Del	0.746	1
DAZAP1	Del_13q14.2	0.746	1
EPS8	19p-Del	0.746	1
SCARF2	1q-Amp	0.746	1
SCARF2	Del_1p36.11	0.746	1
1q-Amp	19p-Del	0.746	1
5p-Amp	14q-Del	0.746	1
5p-Amp	4p-Del	0.746	1
19p-Del	Del_1p36.11	0.746	1
Amp_6p22.3	Amp_12q15	0.746	1
FOXQ1	Del_2q37.1	0.747	1
GPS2	KDM6A	0.747	1
KDM6A	MIPOL1	0.747	1
NF1	PARD3	0.747	1
NF1	ARID1B	0.747	1
NF2	5p-Amp	0.747	1
RUNX1	Del_2q37.1	0.747	1
TBC1D12	Del_2q34	0.747	1
ZBTB7B	5p-Amp	0.747	1
ZFP36L2	8q-Amp	0.747	1
ACTB	8q-Amp	0.747	1
ARID2	5q-Del	0.747	1
IKZF2	Del_2q37.1	0.747	1
STK32B	5p-Amp	0.747	1
CUL1	8q-Amp	0.747	1
CUL1	Del_18q23	0.747	1
1q-Amp	Del_2q37.1	0.747	1
Amp_3q26.33	Del_2q34	0.747	1
ASXL2	COPZ2	0.748	1
ASXL2	KPTN	0.748	1
ASXL2	PTTG1IP	0.748	1
COPZ2	Amp_17q12	0.748	1
ELF3	Amp_4q13.3	0.748	1
ELF3	Del_7q36.3	0.748	1
HRAS	Amp_20q11.21	0.748	1
PKHD1	8p-Del	0.748	1
PSIP1	EPHA2	0.748	1
PTTG1IP	Amp_17q12	0.748	1
RPTN	Amp_17q23.3	0.748	1
RPTN	Del_3p14.2	0.748	1
ACTB	Amp_20q11.21	0.748	1
DDX3X	Del_3p14.2	0.748	1
DENND5B	HFM1	0.748	1
DLX6	HSP90AA1	0.748	1
DLX6	ASXL1	0.748	1
DLX6	Del_12p13.1	0.748	1
EPHA2	RBM26	0.748	1
EPHA2	7q-Amp	0.748	1
HFM1	RBM26	0.748	1
HFM1	7q-Amp	0.748	1
HFM1	15q-Del	0.748	1
HSP90AA1	FUT5	0.748	1
HSP90AA1	ZNF185	0.748	1
KDM5A	RBM26	0.748	1
KDM5A	7q-Amp	0.748	1
NAA15	Del_3p14.2	0.748	1
NCOA1	RBM26	0.748	1
NCOA1	7q-Amp	0.748	1
NDC80	Del_3p14.2	0.748	1
RBM26	OGDH	0.748	1
SLC9A4	Amp_20q11.21	0.748	1
ZNF626	Amp_20q11.21	0.748	1
ASXL1	FUT5	0.748	1
ASXL1	ZNF185	0.748	1
FUT5	Del_12p13.1	0.748	1
OGDH	7q-Amp	0.748	1
OGDH	15q-Del	0.748	1
ZNF185	Del_12p13.1	0.748	1
5p-Amp	Del_8p21.3	0.748	1
Amp_17q23.3	Del_7q36.3	0.748	1
ASXL2	CREBBP	0.749	1
ATM	CTCF	0.749	1
ATM	DPYS	0.749	1
ATM	PPARG	0.749	1
ATM	Del_Xp11.3	0.749	1
ERCC2	GPS2	0.749	1
ERCC2	SF1	0.749	1
ERCC2	NKX2-2	0.749	1
GTF2I	Del_16q23.1	0.749	1
KDM6A	PSIP1	0.749	1
KDM6A	Amp_19q12	0.749	1
PIK3CA	8p-Del	0.749	1
PROS1	Del_4q34.2	0.749	1
TBC1D12	Amp_17q12	0.749	1
CDK12	FAT1	0.749	1
CDK12	Del_11q23.3	0.749	1
CTCF	Del_4q34.2	0.749	1
FAT1	4p-Del	0.749	1
ITGA4	Amp_13q22.1	0.749	1
ITGA4	Del_16q23.1	0.749	1
MBD1	Del_4q34.2	0.749	1
OR10Z1	Amp_3p25.2	0.749	1
PPARGC1A	Del_6p25.3	0.749	1
RBM10	Amp_6p22.3	0.749	1
TXNIP	Amp_13q22.1	0.749	1
UGP2	Amp_3p25.2	0.749	1
Amp_17q12	Del_11q25	0.749	1
Del_4q34.2	Del_Xp11.3	0.749	1
CNNM4	NF2	0.75	1
CNNM4	PSMC6	0.75	1
CNNM4	STK32B	0.75	1
CNNM4	CNOT3	0.75	1
DIAPH2	METTL3	0.75	1
FOXQ1	CDK12	0.75	1
FOXQ1	4p-Del	0.75	1
GPR50	4p-Del	0.75	1
GPS2	HORMAD1	0.75	1
GPS2	NF2	0.75	1
GPS2	ZBTB7B	0.75	1
GPS2	PSMC6	0.75	1
GPS2	CNOT3	0.75	1
GPS2	ZNF773	0.75	1
HORMAD1	SF1	0.75	1
HORMAD1	ZNF511	0.75	1
HORMAD1	NKX2-2	0.75	1
KLF5	SPTAN1	0.75	1
KRAS	CDK12	0.75	1
METTL3	CPD	0.75	1
METTL3	SF3B3	0.75	1
METTL3	FAM47C	0.75	1
MIPOL1	NF2	0.75	1
MIPOL1	STK32B	0.75	1
MIPOL1	CNOT3	0.75	1
MIPOL1	Amp_6q21	0.75	1
NF2	SF1	0.75	1
NF2	ZNF511	0.75	1
NF2	NKX2-2	0.75	1
PTEN	14q-Del	0.75	1
RHOA	RBM10	0.75	1
RHOA	SF3B3	0.75	1
RHOA	TRERF1	0.75	1
RHOA	FAM47C	0.75	1
SF1	ZBTB7B	0.75	1
SF1	PSMC6	0.75	1
SF1	STK32B	0.75	1
SF1	Amp_6q21	0.75	1
SHANK1	CPD	0.75	1
SHANK1	SF3B3	0.75	1
SHANK1	TRERF1	0.75	1
ZBTB7B	ZNF511	0.75	1
ZBTB7B	TFG	0.75	1
ZNF511	PSMC6	0.75	1
ZNF511	STK32B	0.75	1
ZNF511	CNOT3	0.75	1
ZNF511	ZNF773	0.75	1
ZNF511	Amp_6q21	0.75	1
CDK12	EXOSC10	0.75	1
CDK12	WAC	0.75	1
CDK12	BAP1	0.75	1
CDK12	CDH1	0.75	1
DLX6	Del_11p15.5	0.75	1
IKZF2	14q-Del	0.75	1
IKZF2	4p-Del	0.75	1
NKX2-2	PSMC6	0.75	1
NKX2-2	STK32B	0.75	1
NKX2-2	Amp_6q21	0.75	1
TFG	CNOT3	0.75	1
TFG	Amp_6q21	0.75	1
THRAP3	14q-Del	0.75	1
THRAP3	4p-Del	0.75	1
ZNF750	14q-Del	0.75	1
ZNF750	4p-Del	0.75	1
ARID1B	Amp_7p11.2	0.75	1
CDH1	14q-Del	0.75	1
SPTAN1	4q-Del	0.75	1
17q-Amp	Del_8p21.3	0.75	1
1q-Amp	4p-Del	0.75	1
14q-Del	Del_1p36.11	0.75	1
4q-Del	Amp_7p11.2	0.75	1
Del_8p21.3	Del_Xq21.33	0.75	1
ASXL2	EPHA2	0.751	1
ASXL2	Amp_4p16.3	0.751	1
FGFR3	Del_2q22.1	0.751	1
FOXA1	Amp_8p11.21	0.751	1
FOXA1	Del_2q22.1	0.751	1
IDH1	20p-Amp	0.751	1
KRAS	Del_2q22.1	0.751	1
NRAS	Amp_3q26.33	0.751	1
PIGS	20p-Amp	0.751	1
PIGS	Del_22q13.32	0.751	1
POTEG	Del_22q13.32	0.751	1
PROS1	ARID2	0.751	1
SARNP	20p-Amp	0.751	1
TP53	Amp_20q11.21	0.751	1
ZFP36L1	PPARG	0.751	1
ZFP36L1	PPP4R1	0.751	1
ZNF486	Del_22q13.32	0.751	1
ARID2	CTCF	0.751	1
ARID2	DPYS	0.751	1
ARID2	PPP4R1	0.751	1
ARID2	USP28	0.751	1
CASP8	Del_2q22.1	0.751	1
CDK12	CDKN2AIPNL	0.751	1
CDKN2AIPNL	4p-Del	0.751	1
CTCF	Amp_1p34.2	0.751	1
DCDC1	Del_2q22.1	0.751	1
DPYS	Amp_1p34.2	0.751	1
EXOSC10	Amp_8p11.21	0.751	1
GLTP	Del_10q23.31	0.751	1
OR10Z1	20p-Amp	0.751	1
PPARG	Amp_1p34.2	0.751	1
PPP4R1	Amp_1p34.2	0.751	1
THRAP3	Del_2q22.1	0.751	1
UGP2	Del_22q13.32	0.751	1
USP28	Amp_1p34.2	0.751	1
ZBTB47	Amp_11q13.3	0.751	1
ZBTB47	Del_10q23.31	0.751	1
BAP1	Amp_8p11.21	0.751	1
EPS8	Del_2q22.1	0.751	1
OGDH	Amp_17q12	0.751	1
UNC93B1	Amp_11q13.3	0.751	1
UNC93B1	Del_10q23.31	0.751	1
Amp_4p16.3	Amp_17q12	0.751	1
Del_4q22.1	Del_9p21.3	0.751	1
ARID1A	GPR50	0.752	1
ARID1A	KRAS	0.752	1
ARID1A	CASP8	0.752	1
ARID1A	THRAP3	0.752	1
ARID1A	Del_1p36.11	0.752	1
ERBB2	CNOT1	0.752	1
FGFR3	NFE2L2	0.752	1
FGFR3	MYO16	0.752	1
FOXQ1	Amp_5p15.33	0.752	1
NFE2L2	STAG2	0.752	1
NFE2L2	Del_22q13.32	0.752	1
POTEG	Del_8p21.3	0.752	1
RUNX1	Amp_5p15.33	0.752	1
RXRA	Del_16p13.3	0.752	1
RXRA	Del_22q13.32	0.752	1
SARNP	Del_8p21.3	0.752	1
SF3B1	Del_16p13.3	0.752	1
STAG2	Amp_11q22.2	0.752	1
TP53	HSP90AA1	0.752	1
TP53	Del_12p13.1	0.752	1
AGR3	5p-Amp	0.752	1
NDC80	Del_8p21.3	0.752	1
RARG	Del_8p21.3	0.752	1
RBP2	5p-Amp	0.752	1
TRERF1	Amp_19q12	0.752	1
WAC	Amp_5p15.33	0.752	1
ADC	5p-Amp	0.752	1
CDH1	Amp_5p15.33	0.752	1
CNOT1	Amp_19q12	0.752	1
DAZAP1	5p-Amp	0.752	1
EPS8	Amp_5p15.33	0.752	1
19q-Amp	Del_8p21.3	0.752	1
20p-Amp	Amp_11q22.2	0.752	1
22q-Del	Amp_8p11.23	0.752	1
Amp_11q22.2	Del_22q13.32	0.752	1
Del_9p23	Del_16p13.3	0.752	1
C12orf43	CREBBP	0.753	1
C12orf43	Amp_7p21.1	0.753	1
CREBBP	IL10RB	0.753	1
CREBBP	LETMD1	0.753	1
CREBBP	PHLDA3	0.753	1
CREBBP	TAF11	0.753	1
CREBBP	SCARF2	0.753	1
CSMD3	HIST1H3B	0.753	1
CSMD3	Amp_10p14	0.753	1
CSMD3	Del_1q32.1	0.753	1
CSMD3	Del_Xq21.33	0.753	1
ELF3	Del_9p21.3	0.753	1
FBXW7	ASXL1	0.753	1
HIST1H2AG	Amp_7p21.1	0.753	1
HIST1H2AG	Del_6q27	0.753	1
METTL3	PLCXD3	0.753	1
METTL3	RBP2	0.753	1
METTL3	ADC	0.753	1
NHLRC1	Amp_7p21.1	0.753	1
PKHD1	HSP90AA1	0.753	1
PKHD1	ASXL1	0.753	1
PLCXD3	SHANK1	0.753	1
RHOA	AGR3	0.753	1
RHOA	RBP2	0.753	1
RHOA	ADC	0.753	1
RHOA	DAZAP1	0.753	1
RHOA	Amp_8p11.23	0.753	1
RPTN	Amp_22q12.2	0.753	1
SHANK1	AGR3	0.753	1
SHANK1	RBP2	0.753	1
SHANK1	ADC	0.753	1
SHANK1	DAZAP1	0.753	1
SHANK1	Del_16p13.3	0.753	1
TBC1D12	LETMD1	0.753	1
TBC1D12	SNRPB	0.753	1
TBC1D12	SCARF2	0.753	1
TGIF2LX	Amp_7p21.1	0.753	1
TGIF2LX	Del_11q25	0.753	1
CCNE2	Amp_7p21.1	0.753	1
CCNE2	Del_11q25	0.753	1
CPD	Del_13q14.2	0.753	1
HSP90AA1	MED13	0.753	1
MED13	ASXL1	0.753	1
PHLDA3	Del_6q27	0.753	1
RARG	Amp_22q12.2	0.753	1
SNRPB	Amp_7p21.1	0.753	1
SNRPB	Del_11q25	0.753	1
TAF11	Amp_7p21.1	0.753	1
TAF11	Del_11q25	0.753	1
ASXL1	Amp_16p13.2	0.753	1
19q-Amp	Amp_22q12.2	0.753	1
19p-Del	Amp_7p21.1	0.753	1
ARID1A	CREBBP	0.754	1
ATM	HFM1	0.754	1
C3orf70	HSP90AA1	0.754	1
CREBBP	Amp_5p15.33	0.754	1
EP300	HSP90AA1	0.754	1
GTF2I	5p-Amp	0.754	1
HIST1H3B	IDH1	0.754	1
HIST1H3B	POTEG	0.754	1
HIST1H3B	SARNP	0.754	1
HIST1H3B	FUS	0.754	1
HORMAD1	Amp_19q13.43	0.754	1
IDH1	GNA13	0.754	1
IDH1	17q-Amp	0.754	1
NHLRC1	PIK3CA	0.754	1
PIGS	17q-Amp	0.754	1
PIK3CA	PHLDA3	0.754	1
PIK3CA	SNRPB	0.754	1
PIK3CA	19p-Del	0.754	1
PKHD1	Amp_3p25.2	0.754	1
POTEG	TP53	0.754	1
POTEG	GNA13	0.754	1
POTEG	Del_1q32.1	0.754	1
POTEG	Del_Xq21.33	0.754	1
SARNP	TP53	0.754	1
SARNP	GNA13	0.754	1
SARNP	17q-Amp	0.754	1
TBC1D12	Amp_5p15.33	0.754	1
TP53	FUS	0.754	1
ZFP36L2	Del_12p13.1	0.754	1
ZNF486	GNA13	0.754	1
ZNF486	TMCO4	0.754	1
ZNF486	17q-Amp	0.754	1
ZNF486	Del_Xq21.33	0.754	1
HFM1	Del_4q34.2	0.754	1
HSP90AA1	SLC9A4	0.754	1
HSP90AA1	ZNF626	0.754	1
ITGA4	5p-Amp	0.754	1
KDM5A	Del_4q34.2	0.754	1
MED13	Amp_3p25.2	0.754	1
OR10Z1	GNA13	0.754	1
OR10Z1	TMCO4	0.754	1
OR10Z1	17q-Amp	0.754	1
OR10Z1	Del_1q32.1	0.754	1
OR10Z1	Del_Xq21.33	0.754	1
PPARGC1A	5p-Amp	0.754	1
PSMC6	Amp_19q13.43	0.754	1
RIPK4	ASXL1	0.754	1
RIPK4	Del_12p13.1	0.754	1
UGP2	GNA13	0.754	1
UGP2	TMCO4	0.754	1
UGP2	17q-Amp	0.754	1
UGP2	Del_Xq21.33	0.754	1
ZNF626	Del_12p13.1	0.754	1
FUS	Del_1q32.1	0.754	1
7q-Amp	Amp_19q13.43	0.754	1
Amp_4p16.3	Del_4q34.2	0.754	1
Amp_5p15.33	Del_11q25	0.754	1
CDKN1A	COPZ2	0.755	1
CDKN1A	KPTN	0.755	1
CDKN1A	PTTG1IP	0.755	1
COPZ2	11q-Del	0.755	1
CTNNB1	Amp_8q22.3	0.755	1
EP300	18q-Del	0.755	1
FOXA1	Amp_8q22.3	0.755	1
KPTN	11q-Del	0.755	1
KPTN	Del_19p13.3	0.755	1
NF1	Del_16p13.3	0.755	1
NFE2L3	Amp_8q22.3	0.755	1
PTTG1IP	11q-Del	0.755	1
PTTG1IP	5q-Del	0.755	1
PTTG1IP	Del_19p13.3	0.755	1
RB1	Amp_1p34.2	0.755	1
IKZF2	Amp_8q22.3	0.755	1
CDH1	Amp_8q22.3	0.755	1
1q-Amp	Amp_8q22.3	0.755	1
Amp_1q21.3	Del_2q34	0.755	1
ARID1A	3q-Amp	0.756	1
FBXW7	TMCO4	0.756	1
FBXW7	Del_1q32.1	0.756	1
METTL3	Del_17p12	0.756	1
PIGS	Del_11p15.5	0.756	1
PKHD1	GNA13	0.756	1
PKHD1	Del_1q32.1	0.756	1
PKHD1	Del_Xq21.33	0.756	1
POTEG	Del_11p15.5	0.756	1
SARNP	Del_11p15.5	0.756	1
ATAD5	TMCO4	0.756	1
ATAD5	17q-Amp	0.756	1
ATAD5	Del_Xq21.33	0.756	1
CDKN2AIPNL	Del_17p12	0.756	1
MED13	17q-Amp	0.756	1
RBM26	Amp_10p14	0.756	1
GNA13	Amp_16p13.2	0.756	1
SPTAN1	Amp_11q13.3	0.756	1
SPTAN1	Amp_17q23.3	0.756	1
SPTAN1	Del_3p14.2	0.756	1
SPTAN1	Del_10q23.31	0.756	1
17q-Amp	Amp_16p13.2	0.756	1
Amp_7p11.2	Amp_17q23.3	0.756	1
Amp_7p11.2	Del_10q23.31	0.756	1
Amp_16p13.2	Del_1q32.1	0.756	1
ASXL2	Del_4q22.1	0.757	1
FBXW7	Amp_12q15	0.757	1
FBXW7	Amp_13q22.1	0.757	1
RB1	Del_14q24.1	0.757	1
TBC1D12	Del_6p25.3	0.757	1
ZFP36L1	Amp_17q23.3	0.757	1
ZNF180	Amp_10p14	0.757	1
ATAD5	Del_6p25.3	0.757	1
CDK12	Amp_22q12.2	0.757	1
CPD	Amp_5p15.33	0.757	1
DDX3X	Amp_10p14	0.757	1
MED13	Del_16q23.1	0.757	1
16p-Del	9p-Del	0.757	1
9p-Del	Amp_11q22.2	0.757	1
Amp_1p34.2	Del_3p14.2	0.757	1
Amp_4q13.3	Amp_10p14	0.757	1
Amp_12q15	Amp_16p13.2	0.757	1
Amp_13q22.1	Amp_16p13.2	0.757	1
Amp_13q22.1	Del_11q25	0.757	1
Del_6p25.3	Del_11q25	0.757	1
ATM	NRAS	0.758	1
ATM	UBA52	0.758	1
DIAPH2	DLX6	0.758	1
DIAPH2	FUT5	0.758	1
DIAPH2	ZNF185	0.758	1
ERCC2	Del_19p13.3	0.758	1
KLF5	Del_2q37.1	0.758	1
ATAD5	Del_10q23.31	0.758	1
CPD	DLX6	0.758	1
DLX6	RBM10	0.758	1
DLX6	SF3B3	0.758	1
DLX6	TRERF1	0.758	1
DLX6	CNOT1	0.758	1
PARD3	Del_2q37.1	0.758	1
RBM10	FUT5	0.758	1
RBM10	ZNF185	0.758	1
SF3B3	ZNF185	0.758	1
TRERF1	FUT5	0.758	1
TRERF1	ZNF185	0.758	1
UBA52	Del_4q34.2	0.758	1
CNOT1	FUT5	0.758	1
FAM47C	FUT5	0.758	1
Amp_11q13.3	Amp_16p13.2	0.758	1
ASXL2	FGFR3	0.759	1
CDKN2A	CDKN2AIPNL	0.759	1
CSMD3	Amp_11q13.3	0.759	1
DIAPH2	Amp_20q11.21	0.759	1
ERBB3	Del_8p23.3	0.759	1
GPS2	Del_4q22.1	0.759	1
NRAS	RPTN	0.759	1
NRAS	ZNF180	0.759	1
NRAS	DDX3X	0.759	1
NRAS	NAA15	0.759	1
NRAS	NDC80	0.759	1
NRAS	RARG	0.759	1
NRAS	Amp_4q13.3	0.759	1
NRAS	Del_7q36.3	0.759	1
RHOB	CDKN2AIPNL	0.759	1
RPTN	UBA52	0.759	1
RPTN	ZBTB47	0.759	1
RPTN	UNC93B1	0.759	1
SF1	Del_4q22.1	0.759	1
ZNF180	GLTP	0.759	1
ZNF180	ZBTB47	0.759	1
ZNF180	HLA-A	0.759	1
DDX3X	GLTP	0.759	1
DDX3X	UBA52	0.759	1
DDX3X	ZBTB47	0.759	1
DDX3X	HLA-A	0.759	1
DDX3X	UNC93B1	0.759	1
GLTP	NAA15	0.759	1
GLTP	RARG	0.759	1
GLTP	19q-Amp	0.759	1
GLTP	Amp_4q13.3	0.759	1
NAA15	UBA52	0.759	1
NAA15	ZBTB47	0.759	1
NAA15	UNC93B1	0.759	1
NDC80	UBA52	0.759	1
NDC80	ZBTB47	0.759	1
NDC80	HLA-A	0.759	1
RARG	HLA-A	0.759	1
RARG	UNC93B1	0.759	1
RBM10	Amp_20q11.21	0.759	1
RBM10	Del_8p21.3	0.759	1
UBA52	19q-Amp	0.759	1
UBA52	Amp_4q13.3	0.759	1
UBA52	Del_7q36.3	0.759	1
ZBTB47	19q-Amp	0.759	1
ZBTB47	Amp_4q13.3	0.759	1
ZBTB47	Del_7q36.3	0.759	1
HLA-A	19q-Amp	0.759	1
HLA-A	Amp_4q13.3	0.759	1
HLA-A	Del_7q36.3	0.759	1
UNC93B1	19q-Amp	0.759	1
UNC93B1	Amp_4q13.3	0.759	1
UNC93B1	Del_7q36.3	0.759	1
20p-Amp	Amp_1q21.3	0.759	1
Amp_10p14	Amp_22q12.2	0.759	1
Amp_19q12	Del_22q13.32	0.759	1
ERBB3	SARNP	0.76	1
ERBB3	UGP2	0.76	1
GTF2I	KLF5	0.76	1
GTF2I	ARID1B	0.76	1
KLF5	NEK11	0.76	1
KLF5	TXNIP	0.76	1
KLF5	DNAH6	0.76	1
CPD	10q-Del	0.76	1
CPD	6q-Del	0.76	1
NEK11	PARD3	0.76	1
NEK11	7p-Amp	0.76	1
PPARGC1A	4q-Del	0.76	1
RBM10	6q-Del	0.76	1
RBM10	Del_15q13.1	0.76	1
SF3B3	Del_15q13.1	0.76	1
SSH3	7p-Amp	0.76	1
TRERF1	6q-Del	0.76	1
TRERF1	Del_15q13.1	0.76	1
TXNIP	ARID1B	0.76	1
TXNIP	4q-Del	0.76	1
FAM47C	10q-Del	0.76	1
FAM47C	6q-Del	0.76	1
5p-Amp	Del_15q13.1	0.76	1
18q-Del	Amp_19q13.43	0.76	1
Amp_6p22.3	Del_5q12.1	0.76	1
ARID1A	Amp_13q22.1	0.761	1
BTG2	ELF3	0.761	1
C12orf43	ELF3	0.761	1
COPZ2	Amp_19q13.43	0.761	1
CTNNB1	Amp_19q12	0.761	1
ELF3	IL10RB	0.761	1
ELF3	TAF11	0.761	1
ELF3	19p-Del	0.761	1
ERBB2	FOXQ1	0.761	1
ERBB2	KRAS	0.761	1
ERBB2	CASP8	0.761	1
ERBB2	IKZF2	0.761	1
ERBB2	1q-Amp	0.761	1
FBXW7	9q-Del	0.761	1
FBXW7	Del_15q13.1	0.761	1
FOXA1	Amp_19q12	0.761	1
GTF2I	20p-Amp	0.761	1
HIST1H2AG	Del_3p14.2	0.761	1
KDM6A	Del_4q22.1	0.761	1
KPTN	Amp_19q13.43	0.761	1
KRAS	Amp_19q12	0.761	1
NHLRC1	Del_3p14.2	0.761	1
PKHD1	3q-Amp	0.761	1
PKHD1	Del_15q13.1	0.761	1
PTEN	Amp_19q12	0.761	1
PTTG1IP	Amp_19q13.43	0.761	1
TGIF2LX	Del_3p14.2	0.761	1
TP53	7q-Amp	0.761	1
ATAD5	6q-Del	0.761	1
ITGA4	20p-Amp	0.761	1
LETMD1	Del_3p14.2	0.761	1
MARK2	Amp_3p25.2	0.761	1
MED13	10q-Del	0.761	1
NEK11	Del_22q13.32	0.761	1
PPARGC1A	Del_22q13.32	0.761	1
PPP4R1	Amp_3p25.2	0.761	1
SNRPB	Del_3p14.2	0.761	1
SSH3	20p-Amp	0.761	1
SSH3	Del_22q13.32	0.761	1
BAP1	Amp_19q12	0.761	1
5p-Amp	8p-Del	0.761	1
BTG2	CTCF	0.762	1
BTG2	PPARG	0.762	1
BTG2	PPP4R1	0.762	1
BTG2	USP28	0.762	1
C12orf43	PROS1	0.762	1
C12orf43	DPYS	0.762	1
C12orf43	MARK2	0.762	1
C12orf43	PPARG	0.762	1
C12orf43	Del_Xp11.3	0.762	1
CFHR4	NHLRC1	0.762	1
CFHR4	IL10RB	0.762	1
CFHR4	LETMD1	0.762	1
CFHR4	PHLDA3	0.762	1
CFHR4	TAF11	0.762	1
CFHR4	19p-Del	0.762	1
ERBB2	Del_13q14.2	0.762	1
FGFR3	GNA13	0.762	1
FGFR3	Del_1q32.1	0.762	1
FGFR3	Del_Xq21.33	0.762	1
HIST1H2AG	CTCF	0.762	1
HIST1H2AG	DPYS	0.762	1
HIST1H2AG	MARK2	0.762	1
HIST1H2AG	MBD1	0.762	1
HIST1H2AG	PPP4R1	0.762	1
HIST1H2AG	USP28	0.762	1
NHLRC1	PROS1	0.762	1
NHLRC1	CTCF	0.762	1
NHLRC1	DPYS	0.762	1
NHLRC1	MARK2	0.762	1
NHLRC1	MBD1	0.762	1
NHLRC1	PPP4R1	0.762	1
NHLRC1	USP28	0.762	1
NHLRC1	Del_Xp11.3	0.762	1
PLCXD3	Del_8p21.3	0.762	1
PROS1	CCNE2	0.762	1
PROS1	PHLDA3	0.762	1
PROS1	SNRPB	0.762	1
PROS1	TAF11	0.762	1
PROS1	SCARF2	0.762	1
PROS1	19p-Del	0.762	1
RB1	OGDH	0.762	1
RB1	Del_2q22.1	0.762	1
STAG2	Del_1q32.1	0.762	1
TGIF2LX	MARK2	0.762	1
TGIF2LX	MBD1	0.762	1
TGIF2LX	USP28	0.762	1
TGIF2LX	Del_Xp11.3	0.762	1
CCNE2	DPYS	0.762	1
CCNE2	MARK2	0.762	1
CCNE2	PPP4R1	0.762	1
CCNE2	USP28	0.762	1
CCNE2	Del_Xp11.3	0.762	1
CTCF	IL10RB	0.762	1
CTCF	PHLDA3	0.762	1
CTCF	SNRPB	0.762	1
CTCF	TAF11	0.762	1
CTCF	SCARF2	0.762	1
CTCF	19p-Del	0.762	1
DPYS	IL10RB	0.762	1
DPYS	LETMD1	0.762	1
DPYS	PHLDA3	0.762	1
DPYS	SNRPB	0.762	1
DPYS	19p-Del	0.762	1
IL10RB	MARK2	0.762	1
IL10RB	USP28	0.762	1
IL10RB	Del_Xp11.3	0.762	1
LETMD1	MBD1	0.762	1
LETMD1	USP28	0.762	1
LETMD1	Del_Xp11.3	0.762	1
MARK2	PHLDA3	0.762	1
MARK2	SNRPB	0.762	1
MARK2	TAF11	0.762	1
MARK2	SCARF2	0.762	1
MBD1	SCARF2	0.762	1
MBD1	19p-Del	0.762	1
PHLDA3	USP28	0.762	1
PHLDA3	Del_Xp11.3	0.762	1
PPARG	SNRPB	0.762	1
PPARG	TAF11	0.762	1
PPARG	SCARF2	0.762	1
PPARG	19p-Del	0.762	1
PPP4R1	SNRPB	0.762	1
PPP4R1	TAF11	0.762	1
PPP4R1	19p-Del	0.762	1
RBP2	Del_8p21.3	0.762	1
SNRPB	USP28	0.762	1
TAF11	USP28	0.762	1
TAF11	Del_Xp11.3	0.762	1
USP28	SCARF2	0.762	1
USP28	19p-Del	0.762	1
GNA13	Amp_8p11.23	0.762	1
GNA13	Del_16p13.3	0.762	1
SCARF2	Del_Xp11.3	0.762	1
TMCO4	Amp_8p11.23	0.762	1
17q-Amp	Del_16p13.3	0.762	1
19p-Del	Del_Xp11.3	0.762	1
Amp_8p11.23	Del_1q32.1	0.762	1
Amp_19q12	Del_13q14.2	0.762	1
ARID1A	UBA52	0.763	1
ARID1A	HLA-A	0.763	1
EP300	ZBTB7B	0.763	1
EP300	Amp_6q21	0.763	1
HORMAD1	11p-Del	0.763	1
KLF5	Amp_12q15	0.763	1
NRAS	Amp_5p15.33	0.763	1
ZFP36L1	PARD3	0.763	1
ZFP36L1	7p-Amp	0.763	1
ARID2	ARID1B	0.763	1
ARID2	7p-Amp	0.763	1
PARD3	Amp_13q22.1	0.763	1
PARD3	Del_16q23.1	0.763	1
STK32B	11p-Del	0.763	1
ZBTB47	Amp_5p15.33	0.763	1
ARID1B	Del_16q23.1	0.763	1
7p-Amp	Amp_12q15	0.763	1
7p-Amp	Del_16q23.1	0.763	1
Amp_1p34.2	Del_17p12	0.763	1
CDKN2A	FOXA1	0.764	1
CDKN2A	FOXQ1	0.764	1
CDKN2A	GPR50	0.764	1
CDKN2A	KRAS	0.764	1
CDKN2A	RUNX1	0.764	1
CDKN2A	IKZF2	0.764	1
CDKN2A	BAP1	0.764	1
CDKN2A	CDH1	0.764	1
CDKN2A	Del_1p36.11	0.764	1
EP300	AGR3	0.764	1
KDM6A	MARK2	0.764	1
KRAS	RHOB	0.764	1
NFE2L3	RHOB	0.764	1
PLCXD3	17p-Del	0.764	1
PTEN	RHOB	0.764	1
RHOB	RUNX1	0.764	1
RHOB	EXOSC10	0.764	1
RHOB	ZNF750	0.764	1
RHOB	1q-Amp	0.764	1
ZFP36L1	Amp_19q13.43	0.764	1
EPHA2	Del_9p21.3	0.764	1
RBP2	17p-Del	0.764	1
TRERF1	5p-Amp	0.764	1
ADC	11p-Del	0.764	1
DAZAP1	11p-Del	0.764	1
FAM47C	5p-Amp	0.764	1
OGDH	Del_9p23	0.764	1
ASXL2	Amp_17q23.3	0.765	1
C3orf70	PLCXD3	0.765	1
C3orf70	RBP2	0.765	1
CDKN1A	KDM5A	0.765	1
ERBB2	Del_2q22.1	0.765	1
HRAS	PLCXD3	0.765	1
HRAS	AGR3	0.765	1
HRAS	RBP2	0.765	1
HRAS	ADC	0.765	1
HRAS	DAZAP1	0.765	1
NF2	TSC1	0.765	1
PLCXD3	ZFP36L2	0.765	1
PLCXD3	SLC9A4	0.765	1
PLCXD3	ZNF626	0.765	1
PLCXD3	3p-Amp	0.765	1
SF1	Amp_10p14	0.765	1
TBC1D12	CNOT1	0.765	1
TBC1D12	FAM47C	0.765	1
TSC1	PSMC6	0.765	1
TSC1	CNOT3	0.765	1
TSC1	Amp_6q21	0.765	1
ZFP36L2	AGR3	0.765	1
ZFP36L2	RBP2	0.765	1
ZFP36L2	ADC	0.765	1
ZFP36L2	DAZAP1	0.765	1
ACTB	AGR3	0.765	1
ACTB	ADC	0.765	1
AGR3	RIPK4	0.765	1
AGR3	CUL1	0.765	1
AGR3	3p-Amp	0.765	1
CPD	Del_6q27	0.765	1
HFM1	5q-Del	0.765	1
HSP90AA1	8q-Amp	0.765	1
HSP90AA1	Del_18q23	0.765	1
NKX2-2	Amp_10p14	0.765	1
RBM10	Amp_7p21.1	0.765	1
RBP2	RIPK4	0.765	1
RBP2	SLC9A4	0.765	1
RBP2	ZNF626	0.765	1
RBP2	3p-Amp	0.765	1
RIPK4	DAZAP1	0.765	1
SLC9A4	DAZAP1	0.765	1
ZNF626	DAZAP1	0.765	1
ADC	CUL1	0.765	1
ADC	3p-Amp	0.765	1
CNOT1	Del_11q25	0.765	1
FAM47C	Amp_7p21.1	0.765	1
OGDH	11q-Del	0.765	1
20p-Amp	Amp_8p11.23	0.765	1
5q-Del	Amp_4p16.3	0.765	1
Amp_19q12	Del_2q22.1	0.765	1
EP300	Amp_8p11.23	0.766	1
ERBB3	16p-Del	0.766	1
FBXW7	Del_11p15.5	0.766	1
PSIP1	8p-Del	0.766	1
STAG2	11p-Del	0.766	1
RARG	8p-Del	0.766	1
FUT5	Del_2q37.1	0.766	1
ZNF185	Del_2q37.1	0.766	1
19q-Amp	8p-Del	0.766	1
9p-Del	Amp_3q26.33	0.766	1
HORMAD1	Amp_8q22.3	0.767	1
KDM6A	ARID1B	0.767	1
KDM6A	7p-Amp	0.767	1
ZBTB7B	Amp_8q22.3	0.767	1
CDKN2AIPNL	Amp_22q12.2	0.767	1
EPHA2	HFM1	0.767	1
EPHA2	NCOA1	0.767	1
EPHA2	Amp_4p16.3	0.767	1
KDM5A	OGDH	0.767	1
KDM5A	Amp_4p16.3	0.767	1
NCOA1	Amp_4p16.3	0.767	1
RIPK4	Del_14q24.1	0.767	1
SLC9A4	18q-Del	0.767	1
STK32B	Amp_8q22.3	0.767	1
CUL1	Del_14q24.1	0.767	1
OGDH	Amp_4p16.3	0.767	1
3p-Amp	Del_14q24.1	0.767	1
Del_2q37.1	Del_9p21.3	0.767	1
ASXL2	CNNM4	0.768	1
ASXL2	TFG	0.768	1
CFHR4	Del_2q34	0.768	1
COPZ2	TSC1	0.768	1
CSMD3	Amp_1p34.2	0.768	1
GPS2	Amp_17q12	0.768	1
KPTN	TSC1	0.768	1
NF1	HSP90AA1	0.768	1
NF1	Del_Xq21.33	0.768	1
NFE2L2	RPTN	0.768	1
NFE2L2	NDC80	0.768	1
NFE2L2	RARG	0.768	1
NFE2L2	19q-Amp	0.768	1
PTTG1IP	TSC1	0.768	1
RHOA	7q-Amp	0.768	1
RHOA	15q-Del	0.768	1
RPTN	MYO16	0.768	1
RPTN	16p-Del	0.768	1
RPTN	22q-Del	0.768	1
RPTN	Amp_11q22.2	0.768	1
RXRA	ZNF180	0.768	1
RXRA	19q-Amp	0.768	1
RXRA	Amp_4q13.3	0.768	1
SF3B1	NAA15	0.768	1
SF3B1	Amp_4q13.3	0.768	1
SHANK1	7q-Amp	0.768	1
TSC1	DENND5B	0.768	1
TSC1	FAT1	0.768	1
ZNF180	MYO16	0.768	1
ZNF180	16p-Del	0.768	1
CTCF	Del_2q34	0.768	1
DDX3X	16p-Del	0.768	1
DDX3X	22q-Del	0.768	1
DDX3X	Amp_11q22.2	0.768	1
MYO16	NAA15	0.768	1
MYO16	Amp_4q13.3	0.768	1
NKX2-2	Amp_17q12	0.768	1
PPARG	Del_2q34	0.768	1
RARG	22q-Del	0.768	1
TFG	Amp_17q12	0.768	1
USP28	Del_2q34	0.768	1
19q-Amp	16p-Del	0.768	1
19q-Amp	22q-Del	0.768	1
19q-Amp	Amp_11q22.2	0.768	1
22q-Del	Amp_4q13.3	0.768	1
22q-Del	Del_7q36.3	0.768	1
ARID1A	Del_14q24.1	0.769	1
CDKN1A	Amp_10p14	0.769	1
PIGS	Del_8p23.3	0.769	1
POTEG	Del_8p23.3	0.769	1
PSIP1	DLX6	0.769	1
PSIP1	FUT5	0.769	1
PSIP1	ZNF185	0.769	1
RPTN	Amp_7p11.2	0.769	1
SARNP	Del_8p23.3	0.769	1
ZNF180	SPTAN1	0.769	1
DDX3X	Amp_7p11.2	0.769	1
DENND5B	DLX6	0.769	1
DENND5B	ZNF185	0.769	1
DLX6	RBM26	0.769	1
MBD1	Del_11p15.5	0.769	1
NDC80	SPTAN1	0.769	1
NDC80	Amp_7p11.2	0.769	1
OR10Z1	Del_8p23.3	0.769	1
PPARG	Del_11p15.5	0.769	1
RARG	Amp_7p11.2	0.769	1
RBM26	FUT5	0.769	1
RBM26	ZNF185	0.769	1
RBM26	Amp_8p11.21	0.769	1
RBM26	Del_2q22.1	0.769	1
FUT5	7q-Amp	0.769	1
FUT5	15q-Del	0.769	1
SPTAN1	19q-Amp	0.769	1
ZNF185	15q-Del	0.769	1
19q-Amp	Amp_7p11.2	0.769	1
7q-Amp	Amp_8p11.21	0.769	1
15q-Del	Amp_8p11.21	0.769	1
Amp_3p25.2	Del_2q22.1	0.769	1
Del_11p15.5	Del_Xp11.3	0.769	1
ARID1A	Del_2q37.1	0.77	1
CDKN1A	TBC1D12	0.77	1
CNNM4	GPS2	0.77	1
CNNM4	MIPOL1	0.77	1
CNNM4	SF1	0.77	1
CNNM4	NKX2-2	0.77	1
CNNM4	TFG	0.77	1
COPZ2	Amp_8q22.3	0.77	1
CREBBP	5q-Del	0.77	1
CREBBP	Del_19p13.3	0.77	1
CSMD3	ARID1B	0.77	1
CSMD3	7p-Amp	0.77	1
CSMD3	4q-Del	0.77	1
GPS2	MIPOL1	0.77	1
GPS2	SF1	0.77	1
GPS2	NKX2-2	0.77	1
GPS2	TFG	0.77	1
MIPOL1	SF1	0.77	1
MIPOL1	ZNF511	0.77	1
PTTG1IP	Amp_8q22.3	0.77	1
SF1	ZNF511	0.77	1
SF1	NKX2-2	0.77	1
SF1	TFG	0.77	1
TBC1D12	Del_19p13.3	0.77	1
ZNF511	NKX2-2	0.77	1
ARID2	Amp_6p22.3	0.77	1
NKX2-2	TFG	0.77	1
ADC	8q-Amp	0.77	1
ADC	Del_18q23	0.77	1
DAZAP1	8q-Amp	0.77	1
8q-Amp	Del_14q24.1	0.77	1
ASXL2	9q-Del	0.771	1
C3orf70	TRERF1	0.771	1
C3orf70	CNOT1	0.771	1
C3orf70	FAM47C	0.771	1
CREBBP	CTNNB1	0.771	1
CREBBP	FOXA1	0.771	1
CREBBP	NFE2L3	0.771	1
CREBBP	EPS8	0.771	1
CTNNB1	TBC1D12	0.771	1
CTNNB1	Del_11q25	0.771	1
DIAPH2	ZFP36L2	0.771	1
DIAPH2	RIPK4	0.771	1
DIAPH2	ZNF626	0.771	1
FOXA1	Amp_7p21.1	0.771	1
FOXQ1	TBC1D12	0.771	1
FOXQ1	Amp_7p21.1	0.771	1
GPR50	TBC1D12	0.771	1
HRAS	CPD	0.771	1
NFE2L3	TBC1D12	0.771	1
NFE2L3	Amp_7p21.1	0.771	1
NFE2L3	Del_11q25	0.771	1
PTEN	TBC1D12	0.771	1
RPTN	Del_9p23	0.771	1
RUNX1	TBC1D12	0.771	1
TBC1D12	DCDC1	0.771	1
TBC1D12	EXOSC10	0.771	1
TBC1D12	EPS8	0.771	1
TBC1D12	Del_1p36.11	0.771	1
ZFP36L2	FAM47C	0.771	1
ACTB	CPD	0.771	1
CASP8	Del_6q27	0.771	1
CDK12	11p-Del	0.771	1
CPD	SLC9A4	0.771	1
DCDC1	Amp_7p21.1	0.771	1
EXOSC10	Amp_7p21.1	0.771	1
EXOSC10	Del_11q25	0.771	1
IKZF2	Amp_7p21.1	0.771	1
NDC80	Del_9p23	0.771	1
PSMC6	Del_18q23	0.771	1
RIPK4	TRERF1	0.771	1
RIPK4	FAM47C	0.771	1
SF3B3	SLC9A4	0.771	1
SF3B3	ZNF626	0.771	1
STK32B	8q-Amp	0.771	1
TRERF1	ZNF626	0.771	1
TRERF1	CUL1	0.771	1
ZNF626	CNOT1	0.771	1
ZNF626	FAM47C	0.771	1
BAP1	Del_11q25	0.771	1
CDH1	Amp_7p21.1	0.771	1
CNOT1	3p-Amp	0.771	1
CNOT3	8q-Amp	0.771	1
CNOT3	Del_18q23	0.771	1
CUL1	FAM47C	0.771	1
1q-Amp	Amp_7p21.1	0.771	1
5p-Amp	Amp_3q26.33	0.771	1
5p-Amp	Amp_11q13.3	0.771	1
18q-Del	Amp_22q12.2	0.771	1
5q-Del	Amp_3p25.2	0.771	1
Amp_6q21	Del_18q23	0.771	1
Amp_7p21.1	Del_1p36.11	0.771	1
Amp_17q23.3	Del_8p21.3	0.771	1
ATM	PKHD1	0.772	1
GPR50	RB1	0.772	1
HORMAD1	POTEG	0.772	1
HORMAD1	ZNF486	0.772	1
HORMAD1	OR10Z1	0.772	1
HORMAD1	FUS	0.772	1
IDH1	NF2	0.772	1
IDH1	ZBTB7B	0.772	1
IDH1	STK32B	0.772	1
IDH1	Amp_6q21	0.772	1
NF2	PIGS	0.772	1
NF2	ZNF486	0.772	1
NF2	UGP2	0.772	1
NF2	FUS	0.772	1
PIGS	STK32B	0.772	1
PIGS	CNOT3	0.772	1
PIGS	Amp_6q21	0.772	1
PKHD1	Del_4q34.2	0.772	1
POTEG	PSMC6	0.772	1
POTEG	CNOT3	0.772	1
RB1	ZNF750	0.772	1
RB1	1q-Amp	0.772	1
SARNP	ZBTB7B	0.772	1
SARNP	CNOT3	0.772	1
SF1	8p-Del	0.772	1
ZBTB7B	ZNF486	0.772	1
ZBTB7B	OR10Z1	0.772	1
ZBTB7B	FUS	0.772	1
ZNF486	STK32B	0.772	1
ZNF486	CNOT3	0.772	1
ATAD5	20p-Amp	0.772	1
ATAD5	Del_4q34.2	0.772	1
ATAD5	Del_22q13.32	0.772	1
IKZF2	9p-Del	0.772	1
MED13	20p-Amp	0.772	1
MED13	Del_22q13.32	0.772	1
NKX2-2	8p-Del	0.772	1
OR10Z1	STK32B	0.772	1
OR10Z1	CNOT3	0.772	1
PSMC6	UGP2	0.772	1
STK32B	UGP2	0.772	1
THRAP3	9p-Del	0.772	1
UGP2	CNOT3	0.772	1
UGP2	Amp_6q21	0.772	1
WAC	9p-Del	0.772	1
CDH1	9p-Del	0.772	1
FUS	ZNF773	0.772	1
FUS	Amp_6q21	0.772	1
SPTAN1	Del_4q34.2	0.772	1
UNC93B1	Del_2q34	0.772	1
Amp_16p13.2	Del_4q34.2	0.772	1
ASXL2	CDK12	0.773	1
ASXL2	14q-Del	0.773	1
EP300	PPARGC1A	0.773	1
EP300	TXNIP	0.773	1
GTF2I	17p-Del	0.773	1
ITGA4	11p-Del	0.773	1
NDC80	Del_8p23.3	0.773	1
PPARGC1A	11p-Del	0.773	1
SSH3	17p-Del	0.773	1
TXNIP	11p-Del	0.773	1
SPTAN1	17p-Del	0.773	1
19q-Amp	Del_8p23.3	0.773	1
20p-Amp	Amp_6p22.3	0.773	1
14q-Del	Amp_17q12	0.773	1
4p-Del	Amp_17q12	0.773	1
Amp_4q13.3	Del_8p23.3	0.773	1
Amp_8q22.3	Del_2q22.1	0.773	1
Amp_8q22.3	Del_4q22.1	0.773	1
COPZ2	3q-Amp	0.774	1
COPZ2	10q-Del	0.774	1
CREBBP	CSMD3	0.774	1
CTNNB1	NRAS	0.774	1
CTNNB1	GLTP	0.774	1
CTNNB1	UBA52	0.774	1
CTNNB1	ZBTB47	0.774	1
CTNNB1	HLA-A	0.774	1
CTNNB1	UNC93B1	0.774	1
ELF3	8p-Del	0.774	1
FOXA1	NRAS	0.774	1
FOXA1	GLTP	0.774	1
FOXA1	UBA52	0.774	1
FOXA1	ZBTB47	0.774	1
FOXA1	UNC93B1	0.774	1
FOXQ1	UBA52	0.774	1
FOXQ1	HLA-A	0.774	1
FOXQ1	UNC93B1	0.774	1
GPR50	GLTP	0.774	1
GPR50	ZBTB47	0.774	1
GPR50	HLA-A	0.774	1
KPTN	10q-Del	0.774	1
KPTN	6q-Del	0.774	1
KPTN	Del_15q13.1	0.774	1
KRAS	NRAS	0.774	1
KRAS	GLTP	0.774	1
KRAS	HLA-A	0.774	1
KRAS	UNC93B1	0.774	1
METTL3	Del_10q23.31	0.774	1
NF1	Del_8p21.3	0.774	1
NFE2L3	NRAS	0.774	1
NFE2L3	GLTP	0.774	1
NFE2L3	ZBTB47	0.774	1
NFE2L3	HLA-A	0.774	1
NFE2L3	UNC93B1	0.774	1
NRAS	PTEN	0.774	1
NRAS	CASP8	0.774	1
NRAS	DCDC1	0.774	1
NRAS	EXOSC10	0.774	1
NRAS	IKZF2	0.774	1
NRAS	THRAP3	0.774	1
NRAS	WAC	0.774	1
NRAS	ZNF750	0.774	1
NRAS	BAP1	0.774	1
NRAS	CDH1	0.774	1
NRAS	EPS8	0.774	1
NRAS	1q-Amp	0.774	1
PTEN	GLTP	0.774	1
PTEN	UBA52	0.774	1
PTEN	ZBTB47	0.774	1
PTEN	UNC93B1	0.774	1
PTEN	Del_17p12	0.774	1
PTTG1IP	3q-Amp	0.774	1
PTTG1IP	10q-Del	0.774	1
PTTG1IP	6q-Del	0.774	1
PTTG1IP	Del_15q13.1	0.774	1
RHOA	Amp_3q26.33	0.774	1
RPTN	9q-Del	0.774	1
RUNX1	GLTP	0.774	1
RUNX1	UBA52	0.774	1
RUNX1	ZBTB47	0.774	1
RUNX1	HLA-A	0.774	1
ZFP36L2	Amp_3p25.2	0.774	1
CASP8	GLTP	0.774	1
CASP8	ZBTB47	0.774	1
CASP8	UNC93B1	0.774	1
DCDC1	GLTP	0.774	1
DCDC1	UBA52	0.774	1
DCDC1	HLA-A	0.774	1
EXOSC10	GLTP	0.774	1
EXOSC10	UBA52	0.774	1
EXOSC10	ZBTB47	0.774	1
EXOSC10	HLA-A	0.774	1
EXOSC10	UNC93B1	0.774	1
GLTP	IKZF2	0.774	1
GLTP	WAC	0.774	1
GLTP	ZNF750	0.774	1
GLTP	CDH1	0.774	1
GLTP	1q-Amp	0.774	1
GLTP	Del_1p36.11	0.774	1
IKZF2	ZBTB47	0.774	1
IKZF2	HLA-A	0.774	1
IKZF2	UNC93B1	0.774	1
ITGA4	Amp_1q21.3	0.774	1
NDC80	Del_5q12.1	0.774	1
PPARGC1A	Amp_1q21.3	0.774	1
SSH3	Amp_1q21.3	0.774	1
THRAP3	ZBTB47	0.774	1
THRAP3	HLA-A	0.774	1
THRAP3	Del_17p12	0.774	1
UBA52	ZNF750	0.774	1
UBA52	1q-Amp	0.774	1
UBA52	Del_1p36.11	0.774	1
WAC	ZBTB47	0.774	1
WAC	HLA-A	0.774	1
WAC	UNC93B1	0.774	1
ZBTB47	ZNF750	0.774	1
ZBTB47	CDH1	0.774	1
ZBTB47	EPS8	0.774	1
ZBTB47	1q-Amp	0.774	1
ZBTB47	Del_1p36.11	0.774	1
ZNF750	Del_17p12	0.774	1
BAP1	UNC93B1	0.774	1
BAP1	Del_17p12	0.774	1
CDH1	HLA-A	0.774	1
HLA-A	1q-Amp	0.774	1
UNC93B1	1q-Amp	0.774	1
UNC93B1	Del_1p36.11	0.774	1
19q-Amp	Del_5q12.1	0.774	1
9q-Del	Amp_4q13.3	0.774	1
9q-Del	Del_7q36.3	0.774	1
Amp_8p11.23	Amp_10p14	0.774	1
ASXL2	Amp_17q12	0.775	1
CDKN2A	Amp_22q12.2	0.775	1
DIAPH2	PKHD1	0.775	1
DIAPH2	MED13	0.775	1
FBXW7	CNOT1	0.775	1
KDM6A	Del_5q12.1	0.775	1
ATAD5	SF3B3	0.775	1
FAT1	Del_9p21.3	0.775	1
MED13	SF3B3	0.775	1
MED13	TRERF1	0.775	1
MED13	FAM47C	0.775	1
20q-Amp	Amp_5p15.33	0.775	1
Amp_12q15	Amp_17q23.3	0.775	1
Amp_13q22.1	Amp_17q23.3	0.775	1
CREBBP	Del_22q13.32	0.776	1
GTF2I	Del_12p13.1	0.776	1
HORMAD1	3q-Amp	0.776	1
HORMAD1	10q-Del	0.776	1
KLF5	20p-Amp	0.776	1
KLF5	Del_22q13.32	0.776	1
NF2	6q-Del	0.776	1
NFE2L2	CDKN2AIPNL	0.776	1
PIGS	Del_2q37.1	0.776	1
PKHD1	Amp_8q22.3	0.776	1
RXRA	CDKN2AIPNL	0.776	1
TBC1D12	Del_22q13.32	0.776	1
ZBTB7B	6q-Del	0.776	1
ZNF486	Del_2q37.1	0.776	1
CDK12	Amp_19q12	0.776	1
CDKN2AIPNL	16p-Del	0.776	1
CDKN2AIPNL	22q-Del	0.776	1
CDKN2AIPNL	Amp_11q22.2	0.776	1
HFM1	Del_2q34	0.776	1
HSP90AA1	TXNIP	0.776	1
HSP90AA1	DNAH6	0.776	1
ITGA4	ASXL1	0.776	1
KDM5A	Del_2q34	0.776	1
PSMC6	10q-Del	0.776	1
PSMC6	6q-Del	0.776	1
RBM26	9q-Del	0.776	1
RBM26	Del_5q12.1	0.776	1
SSH3	ASXL1	0.776	1
SSH3	Del_12p13.1	0.776	1
STK32B	10q-Del	0.776	1
TXNIP	Del_12p13.1	0.776	1
UGP2	Del_2q37.1	0.776	1
ADC	Del_8p23.3	0.776	1
ASXL1	SPTAN1	0.776	1
CNOT1	Del_9p21.3	0.776	1
CNOT3	3q-Amp	0.776	1
SPTAN1	Del_12p13.1	0.776	1
20p-Amp	4q-Del	0.776	1
7q-Amp	9q-Del	0.776	1
Amp_3q26.33	Amp_13q22.1	0.776	1
Amp_7p21.1	Del_22q13.32	0.776	1
Del_11q25	Del_22q13.32	0.776	1
ASXL2	RHOA	0.777	1
C12orf43	SPTAN1	0.777	1
C3orf70	CSMD3	0.777	1
CSMD3	RIPK4	0.777	1
CSMD3	ZNF626	0.777	1
ELF3	RBM10	0.777	1
ELF3	TRERF1	0.777	1
ERCC2	Amp_19q13.43	0.777	1
GTF2I	ADC	0.777	1
GTF2I	DAZAP1	0.777	1
HIST1H2AG	SPTAN1	0.777	1
METTL3	Amp_17q12	0.777	1
NFE2L2	CDK12	0.777	1
NHLRC1	SPTAN1	0.777	1
NHLRC1	Amp_7p11.2	0.777	1
PLCXD3	NEK11	0.777	1
PLCXD3	PPARGC1A	0.777	1
PLCXD3	SSH3	0.777	1
PLCXD3	DNAH6	0.777	1
PROS1	14q-Del	0.777	1
PROS1	4p-Del	0.777	1
RXRA	4p-Del	0.777	1
SF3B1	Del_10q23.31	0.777	1
TGIF2LX	Amp_7p11.2	0.777	1
AGR3	TXNIP	0.777	1
AGR3	DNAH6	0.777	1
CCNE2	SPTAN1	0.777	1
CDK12	DPYS	0.777	1
CDK12	MARK2	0.777	1
CDK12	PPP4R1	0.777	1
CDK12	22q-Del	0.777	1
CDK12	Amp_11q22.2	0.777	1
CPD	Del_3p14.2	0.777	1
CTCF	20q-Amp	0.777	1
CTCF	14q-Del	0.777	1
DPYS	14q-Del	0.777	1
DPYS	4p-Del	0.777	1
FAT1	MBD1	0.777	1
FAT1	PPP4R1	0.777	1
FAT1	USP28	0.777	1
IL10RB	SPTAN1	0.777	1
IL10RB	Amp_7p11.2	0.777	1
ITGA4	ADC	0.777	1
ITGA4	DAZAP1	0.777	1
MARK2	14q-Del	0.777	1
MARK2	4p-Del	0.777	1
MBD1	20q-Amp	0.777	1
MBD1	14q-Del	0.777	1
MYO16	14q-Del	0.777	1
MYO16	Del_10q23.31	0.777	1
NEK11	RBP2	0.777	1
NEK11	ADC	0.777	1
NEK11	DAZAP1	0.777	1
PPARG	20q-Amp	0.777	1
PPARG	14q-Del	0.777	1
PPARGC1A	RBP2	0.777	1
PPARGC1A	ADC	0.777	1
PPP4R1	20q-Amp	0.777	1
PPP4R1	14q-Del	0.777	1
PPP4R1	Del_11q23.3	0.777	1
RBP2	SSH3	0.777	1
RBP2	TXNIP	0.777	1
RBP2	DNAH6	0.777	1
SF3B3	Amp_17q23.3	0.777	1
SSH3	DAZAP1	0.777	1
TRERF1	Amp_17q23.3	0.777	1
TXNIP	ADC	0.777	1
TXNIP	DAZAP1	0.777	1
USP28	14q-Del	0.777	1
USP28	Del_11q23.3	0.777	1
ZNF626	Amp_5p15.33	0.777	1
SCARF2	Amp_7p11.2	0.777	1
20q-Amp	Del_Xp11.3	0.777	1
14q-Del	Amp_11q22.2	0.777	1
14q-Del	Del_Xp11.3	0.777	1
16p-Del	Amp_11q13.3	0.777	1
4p-Del	Del_Xp11.3	0.777	1
Amp_1q21.3	Del_4q22.1	0.777	1
Amp_3q26.33	Amp_11q22.2	0.777	1
Del_9p21.3	Del_15q13.1	0.777	1
Del_11q23.3	Del_Xp11.3	0.777	1
BTG2	GNA13	0.778	1
BTG2	TMCO4	0.778	1
BTG2	17q-Amp	0.778	1
C12orf43	17q-Amp	0.778	1
C12orf43	Del_1q32.1	0.778	1
CDKN1A	SF1	0.778	1
CDKN1A	NKX2-2	0.778	1
CNNM4	11q-Del	0.778	1
CNNM4	5q-Del	0.778	1
CNNM4	Del_19p13.3	0.778	1
ERCC2	11p-Del	0.778	1
FOXA1	Amp_22q12.2	0.778	1
GPS2	5q-Del	0.778	1
HIST1H2AG	TMCO4	0.778	1
HIST1H2AG	17q-Amp	0.778	1
HIST1H2AG	Amp_1q21.3	0.778	1
HIST1H2AG	Del_1q32.1	0.778	1
HIST1H2AG	Del_Xq21.33	0.778	1
HIST1H3B	TGIF2LX	0.778	1
HIST1H3B	LETMD1	0.778	1
HIST1H3B	PHLDA3	0.778	1
HIST1H3B	SNRPB	0.778	1
HIST1H3B	SCARF2	0.778	1
HIST1H3B	19p-Del	0.778	1
METTL3	Del_8p23.3	0.778	1
MIPOL1	Del_19p13.3	0.778	1
NHLRC1	GNA13	0.778	1
NHLRC1	17q-Amp	0.778	1
NHLRC1	Del_1q32.1	0.778	1
NHLRC1	Del_Xq21.33	0.778	1
PIGS	18q-Del	0.778	1
PIGS	Del_14q24.1	0.778	1
POTEG	Del_14q24.1	0.778	1
SARNP	Del_14q24.1	0.778	1
SF1	5q-Del	0.778	1
SF1	Del_19p13.3	0.778	1
SHANK1	Del_8p23.3	0.778	1
TGIF2LX	TMCO4	0.778	1
TGIF2LX	Amp_1q21.3	0.778	1
TGIF2LX	Del_1q32.1	0.778	1
ZNF486	Del_14q24.1	0.778	1
ZNF511	11q-Del	0.778	1
ZNF511	5q-Del	0.778	1
ZNF511	Del_19p13.3	0.778	1
CCNE2	GNA13	0.778	1
CCNE2	17q-Amp	0.778	1
CCNE2	Del_1q32.1	0.778	1
EXOSC10	Amp_22q12.2	0.778	1
IL10RB	GNA13	0.778	1
IL10RB	17q-Amp	0.778	1
IL10RB	Del_Xq21.33	0.778	1
KDM5A	Amp_19q13.43	0.778	1
LETMD1	GNA13	0.778	1
LETMD1	Del_Xq21.33	0.778	1
OR10Z1	18q-Del	0.778	1
PHLDA3	GNA13	0.778	1
PHLDA3	TMCO4	0.778	1
PHLDA3	17q-Amp	0.778	1
PHLDA3	Del_1q32.1	0.778	1
PHLDA3	Del_Xq21.33	0.778	1
SNRPB	GNA13	0.778	1
SNRPB	TMCO4	0.778	1
SNRPB	17q-Amp	0.778	1
SNRPB	Amp_1q21.3	0.778	1
SNRPB	Del_1q32.1	0.778	1
SNRPB	Del_Xq21.33	0.778	1
TAF11	GNA13	0.778	1
TAF11	TMCO4	0.778	1
TAF11	Del_1q32.1	0.778	1
THRAP3	Amp_22q12.2	0.778	1
UGP2	Del_14q24.1	0.778	1
EPS8	Amp_22q12.2	0.778	1
FUS	18q-Del	0.778	1
FUS	Del_14q24.1	0.778	1
GNA13	SCARF2	0.778	1
GNA13	19p-Del	0.778	1
SCARF2	TMCO4	0.778	1
SCARF2	17q-Amp	0.778	1
SCARF2	Del_1q32.1	0.778	1
SCARF2	Del_Xq21.33	0.778	1
TMCO4	19p-Del	0.778	1
17q-Amp	19p-Del	0.778	1
1q-Amp	Amp_22q12.2	0.778	1
7q-Amp	Amp_1q21.3	0.778	1
19p-Del	Del_Xq21.33	0.778	1
Amp_3q26.33	Amp_8p11.23	0.778	1
Amp_4p16.3	Amp_19q13.43	0.778	1
C3orf70	ERCC2	0.779	1
CNNM4	Del_5q12.1	0.779	1
CSMD3	Del_4q34.2	0.779	1
ERBB3	Amp_19q12	0.779	1
ERCC2	SLC9A4	0.779	1
GPS2	Del_5q12.1	0.779	1
GTF2I	KDM6A	0.779	1
KDM6A	SSH3	0.779	1
NF1	3q-Amp	0.779	1
NF1	6q-Del	0.779	1
NRAS	FAT1	0.779	1
NRAS	20q-Amp	0.779	1
ZNF511	9q-Del	0.779	1
DLX6	EPHA2	0.779	1
DLX6	HFM1	0.779	1
DLX6	KDM5A	0.779	1
DLX6	NCOA1	0.779	1
DLX6	OGDH	0.779	1
DLX6	Amp_4p16.3	0.779	1
EPHA2	FUT5	0.779	1
EPHA2	ZNF185	0.779	1
GLTP	20q-Amp	0.779	1
HFM1	FUT5	0.779	1
HFM1	ZNF185	0.779	1
KDM5A	FUT5	0.779	1
KDM5A	ZNF185	0.779	1
NKX2-2	Del_5q12.1	0.779	1
UBA52	20q-Amp	0.779	1
UBA52	Del_11q23.3	0.779	1
FUT5	Amp_4p16.3	0.779	1
GNA13	Amp_3q26.33	0.779	1
GNA13	Amp_6p22.3	0.779	1
GNA13	Del_10q23.31	0.779	1
HLA-A	20q-Amp	0.779	1
HLA-A	Del_11q23.3	0.779	1
UNC93B1	Del_11q23.3	0.779	1
UNC93B1	Del_17p12	0.779	1
ZNF185	Amp_4p16.3	0.779	1
17q-Amp	Amp_11q13.3	0.779	1
17q-Amp	Del_10q23.31	0.779	1
Amp_11q13.3	Del_1q32.1	0.779	1
Del_1q32.1	Del_10q23.31	0.779	1
HIST1H3B	ARID2	0.78	1
PIK3CA	PARD3	0.78	1
POTEG	Amp_1q23.3	0.78	1
RPTN	Amp_12q15	0.78	1
RPTN	Del_6p25.3	0.78	1
TP53	GLTP	0.78	1
TP53	Amp_11q13.3	0.78	1
ZFP36L1	GNA13	0.78	1
ZFP36L1	Amp_8p11.23	0.78	1
ZNF180	Del_6p25.3	0.78	1
ARID2	Del_Xq21.33	0.78	1
DDX3X	Amp_13q22.1	0.78	1
DDX3X	Del_16q23.1	0.78	1
NAA15	Amp_12q15	0.78	1
FUS	Amp_1q23.3	0.78	1
GNA13	Amp_1p34.2	0.78	1
17q-Amp	Amp_1p34.2	0.78	1
19q-Amp	Del_6p25.3	0.78	1
19q-Amp	Del_16q23.1	0.78	1
20q-Amp	Amp_1q21.3	0.78	1
Amp_1p34.2	Del_Xq21.33	0.78	1
Amp_4q13.3	Amp_12q15	0.78	1
Amp_4q13.3	Del_6p25.3	0.78	1
ARID1A	RXRA	0.781	1
ARID1A	MYO16	0.781	1
COPZ2	FBXW7	0.781	1
COPZ2	PKHD1	0.781	1
COPZ2	MED13	0.781	1
COPZ2	Amp_16p13.2	0.781	1
ELF3	FOXQ1	0.781	1
ELF3	KRAS	0.781	1
ELF3	NFE2L3	0.781	1
ELF3	RUNX1	0.781	1
ELF3	EXOSC10	0.781	1
ELF3	IKZF2	0.781	1
ELF3	THRAP3	0.781	1
ELF3	EPS8	0.781	1
ERBB2	PSIP1	0.781	1
ERBB2	7q-Amp	0.781	1
FBXW7	KPTN	0.781	1
FBXW7	PTTG1IP	0.781	1
FGFR3	KLF5	0.781	1
FGFR3	4q-Del	0.781	1
GPR50	Amp_17q23.3	0.781	1
KLF5	STAG2	0.781	1
KPTN	ATAD5	0.781	1
KPTN	MED13	0.781	1
KPTN	Amp_16p13.2	0.781	1
PKHD1	PTTG1IP	0.781	1
PSIP1	Amp_19q12	0.781	1
PTEN	Amp_17q23.3	0.781	1
PTTG1IP	ATAD5	0.781	1
PTTG1IP	MED13	0.781	1
PTTG1IP	Amp_16p13.2	0.781	1
RB1	DLX6	0.781	1
RB1	FUT5	0.781	1
RB1	ZNF185	0.781	1
SF3B1	Amp_5p15.33	0.781	1
ZFP36L1	Amp_20q11.21	0.781	1
CDKN2AIPNL	Del_9p23	0.781	1
EXOSC10	Amp_17q23.3	0.781	1
THRAP3	Del_3p14.2	0.781	1
WAC	Del_3p14.2	0.781	1
ARID1B	Del_16p13.3	0.781	1
CDH1	Del_3p14.2	0.781	1
EPS8	Del_3p14.2	0.781	1
7q-Amp	Amp_19q12	0.781	1
ARID1A	ELF3	0.782	1
CDKN1A	8p-Del	0.782	1
FGFR3	Del_2q37.1	0.782	1
GTF2I	Del_18q23	0.782	1
PSIP1	10q-Del	0.782	1
DENND5B	3q-Amp	0.782	1
ITGA4	Amp_6p22.3	0.782	1
ITGA4	Del_18q23	0.782	1
PPARGC1A	Amp_6p22.3	0.782	1
RBM26	10q-Del	0.782	1
RBM26	Del_15q13.1	0.782	1
SSH3	Amp_6p22.3	0.782	1
TXNIP	Amp_6p22.3	0.782	1
GNA13	Amp_1q23.3	0.782	1
3q-Amp	7q-Amp	0.782	1
3q-Amp	15q-Del	0.782	1
7q-Amp	6q-Del	0.782	1
7q-Amp	Del_15q13.1	0.782	1
Amp_5p15.33	Del_3p14.2	0.782	1
CREBBP	Amp_8p11.21	0.783	1
ERBB2	Amp_19q12	0.783	1
ERBB3	Amp_1q23.3	0.783	1
FGFR3	5q-Del	0.783	1
KDM6A	RHOB	0.783	1
KLF5	DDX3X	0.783	1
KLF5	NAA15	0.783	1
KLF5	Amp_4q13.3	0.783	1
KLF5	Del_7q36.3	0.783	1
PIK3CA	ATAD5	0.783	1
RPTN	7p-Amp	0.783	1
STAG2	11q-Del	0.783	1
TBC1D12	Del_2q22.1	0.783	1
TSC1	9p-Del	0.783	1
ZNF180	ARID1B	0.783	1
ZNF180	4q-Del	0.783	1
CDK12	8q-Amp	0.783	1
DDX3X	4q-Del	0.783	1
NAA15	PARD3	0.783	1
NDC80	PARD3	0.783	1
PARD3	19q-Amp	0.783	1
PARD3	Amp_4q13.3	0.783	1
PARD3	Del_7q36.3	0.783	1
RARG	7p-Amp	0.783	1
ARID1B	Amp_4q13.3	0.783	1
19q-Amp	7p-Amp	0.783	1
9p-Del	Amp_12q15	0.783	1
Amp_8p11.21	Del_6q27	0.783	1
Del_2q22.1	Del_6q27	0.783	1
Del_11q25	Del_13q14.2	0.783	1
ARID1A	NKX2-2	0.784	1
C12orf43	Amp_6p22.3	0.784	1
ELF3	Del_11q23.3	0.784	1
GPS2	Amp_5p15.33	0.784	1
HIST1H2AG	Amp_6p22.3	0.784	1
KLF5	CDKN2AIPNL	0.784	1
NF1	Amp_3p25.2	0.784	1
NHLRC1	Amp_6p22.3	0.784	1
TGIF2LX	Amp_6p22.3	0.784	1
CDKN2AIPNL	ARID1B	0.784	1
CDKN2AIPNL	7p-Amp	0.784	1
FAT1	Amp_17q23.3	0.784	1
FAT1	Del_3p14.2	0.784	1
LETMD1	Amp_6p22.3	0.784	1
PHLDA3	Amp_6p22.3	0.784	1
ASXL1	Amp_1p34.2	0.784	1
SCARF2	Amp_6p22.3	0.784	1
20q-Amp	Del_3p14.2	0.784	1
Amp_1q21.3	Amp_11q22.2	0.784	1
Amp_6p22.3	Amp_17q23.3	0.784	1
Amp_8p11.23	Del_18q23	0.784	1
Del_4q34.2	Del_11q23.3	0.784	1
C12orf43	Amp_13q22.1	0.785	1
DIAPH2	EP300	0.785	1
EP300	KDM6A	0.785	1
EP300	CPD	0.785	1
EP300	SF3B3	0.785	1
HIST1H2AG	Amp_13q22.1	0.785	1
HIST1H2AG	Del_6p25.3	0.785	1
HIST1H2AG	Del_16q23.1	0.785	1
METTL3	EPHA2	0.785	1
METTL3	HFM1	0.785	1
METTL3	NCOA1	0.785	1
METTL3	Del_4q34.2	0.785	1
NHLRC1	Amp_13q22.1	0.785	1
NHLRC1	Del_16q23.1	0.785	1
RHOA	KDM5A	0.785	1
RHOA	Amp_4p16.3	0.785	1
TGIF2LX	Amp_13q22.1	0.785	1
TGIF2LX	Del_6p25.3	0.785	1
CCNE2	Amp_12q15	0.785	1
CCNE2	Amp_13q22.1	0.785	1
CCNE2	Del_6p25.3	0.785	1
CCNE2	Del_16q23.1	0.785	1
IL10RB	Amp_12q15	0.785	1
IL10RB	Del_6p25.3	0.785	1
LETMD1	Amp_13q22.1	0.785	1
PHLDA3	Amp_13q22.1	0.785	1
SNRPB	Amp_12q15	0.785	1
SNRPB	Amp_13q22.1	0.785	1
TAF11	Del_6p25.3	0.785	1
FAM47C	11p-Del	0.785	1
SCARF2	Del_6p25.3	0.785	1
19p-Del	Amp_13q22.1	0.785	1
9p-Del	Amp_19q12	0.785	1
Amp_20q11.21	Del_2q34	0.785	1
Del_8p23.3	Del_18q23	0.785	1
C3orf70	Del_16p13.3	0.786	1
CDKN1A	ELF3	0.786	1
ELF3	11q-Del	0.786	1
EP300	6q-Del	0.786	1
ERBB3	FGFR3	0.786	1
ERBB3	Amp_1q21.3	0.786	1
ERCC2	POTEG	0.786	1
ERCC2	SARNP	0.786	1
ERCC2	UGP2	0.786	1
FGFR3	RIPK4	0.786	1
HRAS	STAG2	0.786	1
HRAS	Del_16p13.3	0.786	1
NRAS	Del_2q22.1	0.786	1
PIK3CA	NDC80	0.786	1
PIK3CA	19q-Amp	0.786	1
PROS1	Del_2q22.1	0.786	1
PSIP1	Del_13q14.2	0.786	1
ZFP36L1	Amp_7p11.2	0.786	1
ZFP36L2	Amp_8p11.23	0.786	1
ACTB	Amp_8p11.23	0.786	1
CTCF	Amp_8p11.21	0.786	1
CTCF	Del_2q22.1	0.786	1
FAT1	18q-Del	0.786	1
GLTP	Del_2q22.1	0.786	1
MBD1	Del_2q22.1	0.786	1
MED13	5p-Amp	0.786	1
RIPK4	Amp_8p11.23	0.786	1
UBA52	Del_2q22.1	0.786	1
USP28	Amp_8p11.21	0.786	1
USP28	Del_2q22.1	0.786	1
ZBTB47	Del_2q22.1	0.786	1
ZNF626	Del_16p13.3	0.786	1
CUL1	Amp_8p11.23	0.786	1
HLA-A	Del_2q22.1	0.786	1
SPTAN1	Amp_1p34.2	0.786	1
UNC93B1	Amp_8p11.21	0.786	1
UNC93B1	Del_2q22.1	0.786	1
20q-Amp	Del_18q23	0.786	1
8q-Amp	Del_11q23.3	0.786	1
Amp_8q22.3	Del_12p13.1	0.786	1
Del_8p23.3	Del_11q23.3	0.786	1
Del_8p21.3	Del_9p21.3	0.786	1
BTG2	Amp_8q22.3	0.787	1
C3orf70	15q-Del	0.787	1
FBXW7	HORMAD1	0.787	1
FBXW7	ZBTB7B	0.787	1
FBXW7	STK32B	0.787	1
FBXW7	ZNF773	0.787	1
GPS2	Del_13q14.2	0.787	1
HORMAD1	PKHD1	0.787	1
HORMAD1	MED13	0.787	1
HORMAD1	Amp_16p13.2	0.787	1
HRAS	PSIP1	0.787	1
KPTN	NF1	0.787	1
NF1	PTTG1IP	0.787	1
NF2	ATAD5	0.787	1
NF2	MED13	0.787	1
PKHD1	ZBTB7B	0.787	1
PKHD1	Amp_6q21	0.787	1
PSIP1	ACTB	0.787	1
PSIP1	SLC9A4	0.787	1
PSIP1	CUL1	0.787	1
PSIP1	Amp_6p22.3	0.787	1
RPTN	Amp_1q23.3	0.787	1
SF1	Del_13q14.2	0.787	1
TGIF2LX	Amp_8q22.3	0.787	1
TP53	FAT1	0.787	1
ZFP36L2	DENND5B	0.787	1
ZFP36L2	15q-Del	0.787	1
ACTB	DENND5B	0.787	1
ATAD5	CNOT3	0.787	1
DENND5B	SLC9A4	0.787	1
DENND5B	ZNF626	0.787	1
DENND5B	3p-Amp	0.787	1
EPHA2	FAT1	0.787	1
EPHA2	20q-Amp	0.787	1
FAT1	KDM5A	0.787	1
FAT1	OGDH	0.787	1
KDM5A	Del_11q23.3	0.787	1
RARG	Amp_1q23.3	0.787	1
RBM26	RIPK4	0.787	1
RIPK4	7q-Amp	0.787	1
SLC9A4	7q-Amp	0.787	1
SNRPB	Amp_8q22.3	0.787	1
ZNF626	15q-Del	0.787	1
CNOT1	Amp_3p25.2	0.787	1
SCARF2	Amp_8q22.3	0.787	1
20q-Amp	Amp_4p16.3	0.787	1
3p-Amp	7q-Amp	0.787	1
17p-Del	Amp_1q23.3	0.787	1
18q-Del	Amp_3p25.2	0.787	1
ATM	HIST1H3B	0.788	1
CFHR4	NRAS	0.788	1
CFHR4	GLTP	0.788	1
CFHR4	ZBTB47	0.788	1
CFHR4	HLA-A	0.788	1
CFHR4	UNC93B1	0.788	1
CNNM4	Amp_19q13.43	0.788	1
ERBB3	PKHD1	0.788	1
MIPOL1	Amp_19q13.43	0.788	1
NRAS	PROS1	0.788	1
NRAS	CTCF	0.788	1
NRAS	DPYS	0.788	1
NRAS	MARK2	0.788	1
NRAS	MBD1	0.788	1
NRAS	PPARG	0.788	1
NRAS	USP28	0.788	1
NRAS	Del_Xp11.3	0.788	1
PROS1	ZBTB47	0.788	1
PROS1	HLA-A	0.788	1
PROS1	UNC93B1	0.788	1
TP53	ZFP36L1	0.788	1
CTCF	ZBTB47	0.788	1
CTCF	HLA-A	0.788	1
CTCF	UNC93B1	0.788	1
DPYS	GLTP	0.788	1
DPYS	UBA52	0.788	1
DPYS	HLA-A	0.788	1
GLTP	MARK2	0.788	1
GLTP	MBD1	0.788	1
GLTP	USP28	0.788	1
GLTP	Del_Xp11.3	0.788	1
HSP90AA1	Amp_13q22.1	0.788	1
MARK2	UBA52	0.788	1
MARK2	ZBTB47	0.788	1
MARK2	HLA-A	0.788	1
MARK2	UNC93B1	0.788	1
MBD1	ZBTB47	0.788	1
MBD1	HLA-A	0.788	1
MBD1	UNC93B1	0.788	1
NKX2-2	Amp_19q13.43	0.788	1
PPARG	ZBTB47	0.788	1
PPARG	HLA-A	0.788	1
PPARG	UNC93B1	0.788	1
PPP4R1	UBA52	0.788	1
PPP4R1	ZBTB47	0.788	1
UBA52	USP28	0.788	1
UBA52	Del_Xp11.3	0.788	1
USP28	ZBTB47	0.788	1
USP28	UNC93B1	0.788	1
ZBTB47	Del_Xp11.3	0.788	1
ASXL1	Amp_12q15	0.788	1
ASXL1	Amp_13q22.1	0.788	1
17q-Amp	Del_4q34.2	0.788	1
20q-Amp	Amp_10p14	0.788	1
ATM	Amp_11q22.2	0.789	1
NF1	RBM10	0.789	1
NF1	TRERF1	0.789	1
NFE2L2	Del_4q34.2	0.789	1
PIK3CA	CDKN2AIPNL	0.789	1
PIK3CA	Del_14q24.1	0.789	1
TBC1D12	14q-Del	0.789	1
CDK12	Del_11q25	0.789	1
4p-Del	Del_11q25	0.789	1
Amp_17q12	Del_10q23.31	0.789	1
ARID1A	MED13	0.79	1
ARID1A	Amp_16p13.2	0.79	1
BTG2	Amp_20q11.21	0.79	1
CDKN1A	METTL3	0.79	1
CDKN2A	MARK2	0.79	1
CDKN2A	PPP4R1	0.79	1
CDKN2A	USP28	0.79	1
CDKN2A	Del_Xp11.3	0.79	1
ERBB3	PARD3	0.79	1
ERBB3	ARID1B	0.79	1
ERBB3	Del_14q24.1	0.79	1
HIST1H2AG	Amp_20q11.21	0.79	1
METTL3	DLX6	0.79	1
METTL3	ZNF185	0.79	1
METTL3	11q-Del	0.79	1
METTL3	5q-Del	0.79	1
PLCXD3	ZNF180	0.79	1
PLCXD3	NAA15	0.79	1
PLCXD3	NDC80	0.79	1
PLCXD3	RARG	0.79	1
PLCXD3	19q-Amp	0.79	1
PLCXD3	Amp_4q13.3	0.79	1
PLCXD3	Del_7q36.3	0.79	1
PROS1	RHOB	0.79	1
RHOA	DLX6	0.79	1
RHOA	FUT5	0.79	1
RHOA	ZNF185	0.79	1
RHOA	5q-Del	0.79	1
RHOA	Del_19p13.3	0.79	1
RHOB	CTCF	0.79	1
RHOB	MBD1	0.79	1
RPTN	AGR3	0.79	1
RPTN	RBP2	0.79	1
RPTN	DAZAP1	0.79	1
RPTN	Del_22q13.32	0.79	1
SF3B1	Del_8p23.3	0.79	1
SHANK1	DLX6	0.79	1
SHANK1	FUT5	0.79	1
SHANK1	Del_19p13.3	0.79	1
TGIF2LX	Amp_20q11.21	0.79	1
ZNF180	AGR3	0.79	1
ZNF180	ADC	0.79	1
AGR3	NAA15	0.79	1
AGR3	NDC80	0.79	1
AGR3	RARG	0.79	1
AGR3	Amp_4q13.3	0.79	1
AGR3	Del_7q36.3	0.79	1
DDX3X	ADC	0.79	1
DDX3X	DAZAP1	0.79	1
EPHA2	Amp_10p14	0.79	1
FAT1	3q-Amp	0.79	1
IL10RB	Amp_20q11.21	0.79	1
ITGA4	Amp_20q11.21	0.79	1
KDM5A	Amp_10p14	0.79	1
NAA15	RBP2	0.79	1
NAA15	ADC	0.79	1
NAA15	DAZAP1	0.79	1
NAA15	Del_22q13.32	0.79	1
NDC80	RBP2	0.79	1
NDC80	ADC	0.79	1
NDC80	DAZAP1	0.79	1
NDC80	20p-Amp	0.79	1
NDC80	Del_22q13.32	0.79	1
PHLDA3	Amp_20q11.21	0.79	1
RARG	RBP2	0.79	1
RARG	ADC	0.79	1
RBP2	19q-Amp	0.79	1
RBP2	Amp_4q13.3	0.79	1
RBP2	Del_7q36.3	0.79	1
TAF11	Amp_20q11.21	0.79	1
ADC	19q-Amp	0.79	1
ADC	Amp_4q13.3	0.79	1
ADC	Del_7q36.3	0.79	1
DAZAP1	19q-Amp	0.79	1
OGDH	Amp_10p14	0.79	1
19q-Amp	Del_22q13.32	0.79	1
20p-Amp	Amp_4q13.3	0.79	1
20q-Amp	3q-Amp	0.79	1
19p-Del	Amp_20q11.21	0.79	1
Amp_4p16.3	Amp_10p14	0.79	1
Del_7q36.3	Del_22q13.32	0.79	1
C3orf70	Del_4q22.1	0.791	1
CFHR4	Del_2q37.1	0.791	1
CNNM4	IDH1	0.791	1
CNNM4	PIGS	0.791	1
CNNM4	OR10Z1	0.791	1
CREBBP	FGFR3	0.791	1
CTNNB1	MYO16	0.791	1
CTNNB1	Amp_11q22.2	0.791	1
DIAPH2	ITGA4	0.791	1
DIAPH2	NEK11	0.791	1
DIAPH2	TXNIP	0.791	1
DIAPH2	DNAH6	0.791	1
FOXA1	16p-Del	0.791	1
FOXA1	22q-Del	0.791	1
FOXQ1	NFE2L2	0.791	1
FOXQ1	Amp_11q22.2	0.791	1
GPR50	SF3B1	0.791	1
GPR50	16p-Del	0.791	1
GPS2	IDH1	0.791	1
GPS2	PIGS	0.791	1
GPS2	POTEG	0.791	1
GPS2	SARNP	0.791	1
GPS2	ZNF486	0.791	1
GPS2	UGP2	0.791	1
GTF2I	RBM10	0.791	1
GTF2I	CNOT1	0.791	1
IDH1	SF1	0.791	1
IDH1	ZNF511	0.791	1
IDH1	NKX2-2	0.791	1
KRAS	NFE2L2	0.791	1
KRAS	16p-Del	0.791	1
KRAS	Amp_11q22.2	0.791	1
MIPOL1	POTEG	0.791	1
MIPOL1	ZNF486	0.791	1
MIPOL1	OR10Z1	0.791	1
MIPOL1	FUS	0.791	1
NFE2L2	NFE2L3	0.791	1
NFE2L2	PTEN	0.791	1
NFE2L2	CDH1	0.791	1
NFE2L2	1q-Amp	0.791	1
NFE2L3	MYO16	0.791	1
NFE2L3	22q-Del	0.791	1
NFE2L3	Amp_11q22.2	0.791	1
PIGS	SF1	0.791	1
PIGS	ZNF511	0.791	1
PIGS	NKX2-2	0.791	1
POTEG	SF1	0.791	1
POTEG	ZNF511	0.791	1
POTEG	NKX2-2	0.791	1
PTEN	RXRA	0.791	1
PTEN	MYO16	0.791	1
PTEN	16p-Del	0.791	1
PTEN	Amp_11q22.2	0.791	1
RUNX1	RXRA	0.791	1
RUNX1	MYO16	0.791	1
RUNX1	Amp_11q22.2	0.791	1
RXRA	IKZF2	0.791	1
RXRA	WAC	0.791	1
RXRA	CDH1	0.791	1
RXRA	EPS8	0.791	1
SARNP	SF1	0.791	1
SARNP	ZNF511	0.791	1
SARNP	NKX2-2	0.791	1
SF1	OR10Z1	0.791	1
SF1	FUS	0.791	1
SF3B1	DCDC1	0.791	1
SF3B1	EXOSC10	0.791	1
SF3B1	IKZF2	0.791	1
SF3B1	THRAP3	0.791	1
SF3B1	ZNF750	0.791	1
SF3B1	Del_1p36.11	0.791	1
STAG2	Del_11q25	0.791	1
TBC1D12	Del_16p13.3	0.791	1
ZNF486	NKX2-2	0.791	1
ZNF511	OR10Z1	0.791	1
ZNF511	UGP2	0.791	1
ZNF511	FUS	0.791	1
CASP8	MYO16	0.791	1
CPD	ITGA4	0.791	1
CPD	DNAH6	0.791	1
DCDC1	MYO16	0.791	1
DCDC1	Amp_11q22.2	0.791	1
EXOSC10	MYO16	0.791	1
EXOSC10	16p-Del	0.791	1
EXOSC10	22q-Del	0.791	1
EXOSC10	Amp_11q22.2	0.791	1
IKZF2	16p-Del	0.791	1
IKZF2	22q-Del	0.791	1
ITGA4	RBM10	0.791	1
ITGA4	TRERF1	0.791	1
ITGA4	CNOT1	0.791	1
MARK2	Del_2q37.1	0.791	1
MYO16	ZNF750	0.791	1
MYO16	BAP1	0.791	1
MYO16	EPS8	0.791	1
MYO16	Del_1p36.11	0.791	1
NKX2-2	OR10Z1	0.791	1
OR10Z1	TFG	0.791	1
PPARGC1A	RBM10	0.791	1
RBM10	TXNIP	0.791	1
SF3B3	SSH3	0.791	1
SF3B3	TXNIP	0.791	1
SLC9A4	Del_4q22.1	0.791	1
SSH3	TRERF1	0.791	1
SSH3	CNOT1	0.791	1
SSH3	FAM47C	0.791	1
TFG	FUS	0.791	1
THRAP3	22q-Del	0.791	1
TRERF1	TXNIP	0.791	1
TXNIP	CNOT1	0.791	1
TXNIP	FAM47C	0.791	1
USP28	Del_2q37.1	0.791	1
ZNF750	16p-Del	0.791	1
CDH1	16p-Del	0.791	1
CDH1	Amp_11q22.2	0.791	1
DNAH6	FAM47C	0.791	1
EPS8	16p-Del	0.791	1
1q-Amp	22q-Del	0.791	1
16p-Del	Del_1p36.11	0.791	1
Amp_8p11.23	Del_6q27	0.791	1
Amp_11q22.2	Del_1p36.11	0.791	1
ATM	Del_16q23.1	0.792	1
CREBBP	7q-Amp	0.792	1
PSIP1	Del_6q27	0.792	1
TBC1D12	RBM26	0.792	1
TSC1	EPHA2	0.792	1
DDX3X	5p-Amp	0.792	1
DENND5B	Amp_7p21.1	0.792	1
RBM26	Del_11q25	0.792	1
ADC	Del_9p21.3	0.792	1
5p-Amp	Amp_4q13.3	0.792	1
Amp_22q12.2	Del_13q14.2	0.792	1
ASXL2	11q-Del	0.793	1
ASXL2	5q-Del	0.793	1
ASXL2	Del_19p13.3	0.793	1
BTG2	20p-Amp	0.793	1
C12orf43	20p-Amp	0.793	1
CDKN2A	MYO16	0.793	1
CDKN2A	22q-Del	0.793	1
CDKN2A	Amp_11q22.2	0.793	1
ELF3	Del_22q13.32	0.793	1
ERBB2	UBA52	0.793	1
ERBB2	HLA-A	0.793	1
HIST1H2AG	Del_22q13.32	0.793	1
METTL3	Amp_1q23.3	0.793	1
NFE2L2	RHOB	0.793	1
RHOA	Amp_1q23.3	0.793	1
RHOB	22q-Del	0.793	1
SF3B1	18q-Del	0.793	1
SF3B1	Del_14q24.1	0.793	1
SHANK1	Amp_1q23.3	0.793	1
TGIF2LX	Del_22q13.32	0.793	1
CCNE2	20p-Amp	0.793	1
CDKN2AIPNL	Del_12p13.1	0.793	1
GLTP	Amp_19q12	0.793	1
HFM1	Amp_8q22.3	0.793	1
IL10RB	20p-Amp	0.793	1
LETMD1	20p-Amp	0.793	1
MYO16	Del_14q24.1	0.793	1
PHLDA3	20p-Amp	0.793	1
PHLDA3	Del_22q13.32	0.793	1
SNRPB	20p-Amp	0.793	1
SNRPB	Del_22q13.32	0.793	1
TAF11	20p-Amp	0.793	1
UBA52	Amp_19q12	0.793	1
HLA-A	Amp_19q12	0.793	1
OGDH	Amp_8q22.3	0.793	1
SCARF2	20p-Amp	0.793	1
UNC93B1	Amp_19q12	0.793	1
20p-Amp	19p-Del	0.793	1
5p-Amp	Del_8p23.3	0.793	1
11q-Del	Amp_17q12	0.793	1
16p-Del	Del_14q24.1	0.793	1
Amp_11q22.2	Del_14q24.1	0.793	1
COPZ2	ARID2	0.794	1
COPZ2	Amp_1p34.2	0.794	1
CSMD3	Del_3p14.2	0.794	1
FGFR3	ADC	0.794	1
FGFR3	DAZAP1	0.794	1
KDM6A	KDM5A	0.794	1
MIPOL1	5p-Amp	0.794	1
PTTG1IP	ZFP36L1	0.794	1
PTTG1IP	ARID2	0.794	1
SF1	5p-Amp	0.794	1
STAG2	AGR3	0.794	1
STAG2	DAZAP1	0.794	1
ZNF511	5p-Amp	0.794	1
ITGA4	18q-Del	0.794	1
NEK11	18q-Del	0.794	1
PPARGC1A	18q-Del	0.794	1
PPARGC1A	Del_14q24.1	0.794	1
RBP2	Amp_8p11.23	0.794	1
SSH3	Del_14q24.1	0.794	1
TFG	5p-Amp	0.794	1
TXNIP	18q-Del	0.794	1
TXNIP	Del_14q24.1	0.794	1
ADC	Amp_8p11.23	0.794	1
ADC	Del_16p13.3	0.794	1
DNAH6	Del_14q24.1	0.794	1
17p-Del	Amp_13q22.1	0.794	1
Amp_13q22.1	Del_4q22.1	0.794	1
Del_4q22.1	Del_6p25.3	0.794	1
BTG2	NF2	0.795	1
BTG2	ZBTB7B	0.795	1
BTG2	PSMC6	0.795	1
BTG2	STK32B	0.795	1
BTG2	Amp_6q21	0.795	1
C12orf43	NF2	0.795	1
C12orf43	ZBTB7B	0.795	1
C12orf43	STK32B	0.795	1
C12orf43	CNOT3	0.795	1
C12orf43	Amp_6q21	0.795	1
CSMD3	NF2	0.795	1
CSMD3	ZBTB7B	0.795	1
CSMD3	CNOT3	0.795	1
ERBB2	PROS1	0.795	1
ERBB2	DPYS	0.795	1
ERBB2	MARK2	0.795	1
ERBB2	MBD1	0.795	1
ERBB2	PPARG	0.795	1
ERBB2	PPP4R1	0.795	1
HIST1H2AG	ZBTB7B	0.795	1
HIST1H2AG	PSMC6	0.795	1
HIST1H2AG	STK32B	0.795	1
HIST1H2AG	CNOT3	0.795	1
HIST1H2AG	Amp_6q21	0.795	1
HORMAD1	NHLRC1	0.795	1
HORMAD1	TGIF2LX	0.795	1
HORMAD1	LETMD1	0.795	1
HORMAD1	PHLDA3	0.795	1
HORMAD1	SNRPB	0.795	1
HORMAD1	SCARF2	0.795	1
HORMAD1	19p-Del	0.795	1
NF2	CCNE2	0.795	1
NF2	LETMD1	0.795	1
NF2	PHLDA3	0.795	1
NF2	SNRPB	0.795	1
NF2	TAF11	0.795	1
NF2	SCARF2	0.795	1
NF2	19p-Del	0.795	1
NHLRC1	ZBTB7B	0.795	1
NHLRC1	STK32B	0.795	1
NHLRC1	CNOT3	0.795	1
NHLRC1	ZNF773	0.795	1
PIGS	Del_4q22.1	0.795	1
POTEG	Del_4q22.1	0.795	1
RB1	ZNF486	0.795	1
TGIF2LX	ZBTB7B	0.795	1
TGIF2LX	PSMC6	0.795	1
TGIF2LX	CNOT3	0.795	1
TGIF2LX	Amp_6q21	0.795	1
ZBTB7B	LETMD1	0.795	1
ZBTB7B	SCARF2	0.795	1
ZBTB7B	19p-Del	0.795	1
ZNF486	Del_4q22.1	0.795	1
CCNE2	STK32B	0.795	1
CCNE2	Amp_6q21	0.795	1
IL10RB	PSMC6	0.795	1
IL10RB	STK32B	0.795	1
IL10RB	CNOT3	0.795	1
IL10RB	ZNF773	0.795	1
LETMD1	PSMC6	0.795	1
LETMD1	ZNF773	0.795	1
MBD1	Amp_19q12	0.795	1
OR10Z1	9p-Del	0.795	1
PARD3	4p-Del	0.795	1
PHLDA3	PSMC6	0.795	1
PHLDA3	STK32B	0.795	1
PHLDA3	ZNF773	0.795	1
PHLDA3	Amp_6q21	0.795	1
PSMC6	TAF11	0.795	1
PSMC6	19p-Del	0.795	1
SNRPB	STK32B	0.795	1
SNRPB	CNOT3	0.795	1
SNRPB	ZNF773	0.795	1
SNRPB	Amp_6q21	0.795	1
STK32B	TAF11	0.795	1
STK32B	SCARF2	0.795	1
STK32B	19p-Del	0.795	1
TAF11	ZNF773	0.795	1
TAF11	Amp_6q21	0.795	1
UGP2	Del_4q22.1	0.795	1
USP28	Amp_19q12	0.795	1
FUS	Del_4q22.1	0.795	1
SCARF2	ZNF773	0.795	1
SCARF2	Amp_6q21	0.795	1
ZNF773	19p-Del	0.795	1
7p-Amp	14q-Del	0.795	1
7p-Amp	4p-Del	0.795	1
19p-Del	Amp_6q21	0.795	1
DIAPH2	Del_18q23	0.796	1
HORMAD1	PIK3CA	0.796	1
PIK3CA	ZBTB7B	0.796	1
PKHD1	DENND5B	0.796	1
PSIP1	Amp_16p13.2	0.796	1
STAG2	Del_4q34.2	0.796	1
ATAD5	DENND5B	0.796	1
ATAD5	RBM26	0.796	1
DLX6	Amp_10p14	0.796	1
MED13	RBM26	0.796	1
MED13	7q-Amp	0.796	1
RBM10	8q-Amp	0.796	1
SF3B3	8q-Amp	0.796	1
TRERF1	Del_18q23	0.796	1
CNOT1	8q-Amp	0.796	1
FAM47C	8q-Amp	0.796	1
ZNF185	Amp_10p14	0.796	1
15q-Del	Amp_20q11.21	0.796	1
ASXL2	5p-Amp	0.797	1
PIK3CA	Del_6q27	0.797	1
RPTN	ASXL1	0.797	1
RPTN	Del_12p13.1	0.797	1
ZFP36L1	10q-Del	0.797	1
ZFP36L1	Del_15q13.1	0.797	1
ZNF180	Del_12p13.1	0.797	1
DDX3X	HSP90AA1	0.797	1
DDX3X	Del_12p13.1	0.797	1
HSP90AA1	NAA15	0.797	1
HSP90AA1	NDC80	0.797	1
HSP90AA1	Amp_4q13.3	0.797	1
NAA15	Del_12p13.1	0.797	1
NDC80	Del_12p13.1	0.797	1
RARG	Del_12p13.1	0.797	1
5p-Amp	Amp_17q12	0.797	1
Amp_4p16.3	Amp_8p11.21	0.797	1
Del_7q36.3	Del_12p13.1	0.797	1
CDKN2A	EP300	0.798	1
MIPOL1	TSC1	0.798	1
NF1	NF2	0.798	1
NF1	STK32B	0.798	1
NF1	CNOT3	0.798	1
RHOB	11p-Del	0.798	1
SF1	TSC1	0.798	1
TP53	DCDC1	0.798	1
TP53	THRAP3	0.798	1
TP53	CDH1	0.798	1
TP53	EPS8	0.798	1
TSC1	ZNF511	0.798	1
TSC1	TFG	0.798	1
HSP90AA1	Del_9p23	0.798	1
ASXL1	Del_9p23	0.798	1
Amp_20q11.21	Del_13q14.2	0.798	1
ARID1A	ERCC2	0.799	1
ARID1A	7q-Amp	0.799	1
ARID1A	15q-Del	0.799	1
CREBBP	5p-Amp	0.799	1
CSMD3	Amp_3p25.2	0.799	1
ERCC2	Amp_5p15.33	0.799	1
KDM6A	Amp_1q21.3	0.799	1
PSIP1	Amp_5p15.33	0.799	1
TBC1D12	5p-Amp	0.799	1
RBM26	Amp_5p15.33	0.799	1
3q-Amp	18q-Del	0.799	1
7q-Amp	Amp_5p15.33	0.799	1
Amp_13q22.1	Del_17p12	0.799	1
Amp_22q12.2	Del_11q23.3	0.799	1
BTG2	ERBB3	0.8	1
C3orf70	DLX6	0.8	1
CREBBP	NRAS	0.8	1
CREBBP	ZBTB47	0.8	1
CREBBP	UNC93B1	0.8	1
ERBB3	HIST1H2AG	0.8	1
FOXA1	Amp_7p11.2	0.8	1
GPR50	Amp_7p11.2	0.8	1
HRAS	DLX6	0.8	1
HRAS	FUT5	0.8	1
HRAS	ZNF185	0.8	1
HRAS	Del_17p12	0.8	1
NFE2L3	SPTAN1	0.8	1
NFE2L3	Amp_7p11.2	0.8	1
PTEN	Amp_7p11.2	0.8	1
TBC1D12	GLTP	0.8	1
TBC1D12	HLA-A	0.8	1
ZFP36L2	FUT5	0.8	1
ZFP36L2	ZNF185	0.8	1
ACTB	DLX6	0.8	1
ACTB	FUT5	0.8	1
ACTB	ZNF185	0.8	1
DLX6	RIPK4	0.8	1
DLX6	SLC9A4	0.8	1
DLX6	3p-Amp	0.8	1
EPHA2	8p-Del	0.8	1
GLTP	Amp_7p21.1	0.8	1
GLTP	Del_6q27	0.8	1
HSP90AA1	20p-Amp	0.8	1
IKZF2	Amp_7p11.2	0.8	1
NKX2-2	Del_9p21.3	0.8	1
RIPK4	FUT5	0.8	1
RIPK4	ZNF185	0.8	1
SLC9A4	ZNF185	0.8	1
THRAP3	Amp_7p11.2	0.8	1
UBA52	Del_11q25	0.8	1
WAC	SPTAN1	0.8	1
ZBTB47	Amp_7p21.1	0.8	1
ZNF626	FUT5	0.8	1
ZNF626	ZNF185	0.8	1
BAP1	SPTAN1	0.8	1
CDH1	SPTAN1	0.8	1
CUL1	FUT5	0.8	1
CUL1	ZNF185	0.8	1
EPS8	SPTAN1	0.8	1
FUT5	3p-Amp	0.8	1
HLA-A	Amp_7p21.1	0.8	1
SPTAN1	1q-Amp	0.8	1
UNC93B1	Del_11q25	0.8	1
ZNF185	3p-Amp	0.8	1
Amp_1p34.2	Amp_13q22.1	0.8	1
ERBB3	ZNF180	0.801	1
ERBB3	DDX3X	0.801	1
ERBB3	NAA15	0.801	1
ERBB3	RARG	0.801	1
ERBB3	19q-Amp	0.801	1
ERBB3	Amp_4q13.3	0.801	1
FBXW7	Del_2q37.1	0.801	1
PIK3CA	Del_2q34	0.801	1
ATAD5	Del_2q37.1	0.801	1
DLX6	8p-Del	0.801	1
SF3B3	SPTAN1	0.801	1
TRERF1	Amp_7p11.2	0.801	1
FAM47C	SPTAN1	0.801	1
8q-Amp	11p-Del	0.801	1
11p-Del	Del_4q22.1	0.801	1
18q-Del	Amp_8p11.21	0.801	1
18q-Del	Del_2q22.1	0.801	1
Amp_16p13.2	Del_2q37.1	0.801	1
Amp_17q23.3	Del_2q22.1	0.801	1
Del_2q22.1	Del_14q24.1	0.801	1
ASXL2	HRAS	0.802	1
ASXL2	ZNF626	0.802	1
ATM	Del_2q22.1	0.802	1
DIAPH2	CDKN2AIPNL	0.802	1
FGFR3	CNOT3	0.802	1
HORMAD1	STAG2	0.802	1
METTL3	Amp_19q13.43	0.802	1
PROS1	Amp_22q12.2	0.802	1
STAG2	ZBTB7B	0.802	1
STAG2	PSMC6	0.802	1
STAG2	STK32B	0.802	1
STAG2	CNOT3	0.802	1
STAG2	Amp_6q21	0.802	1
TBC1D12	Amp_1q23.3	0.802	1
ZNF511	Del_17p12	0.802	1
ACTB	Amp_17q12	0.802	1
CDKN2AIPNL	CPD	0.802	1
CDKN2AIPNL	RBM10	0.802	1
CDKN2AIPNL	SF3B3	0.802	1
CDKN2AIPNL	CNOT1	0.802	1
CDKN2AIPNL	FAM47C	0.802	1
ITGA4	Amp_8q22.3	0.802	1
MARK2	Amp_22q12.2	0.802	1
TXNIP	Amp_8q22.3	0.802	1
ZNF626	Amp_17q12	0.802	1
CNOT3	Amp_8p11.23	0.802	1
CUL1	Amp_17q12	0.802	1
8p-Del	Amp_1p34.2	0.802	1
Amp_1q23.3	Del_11q25	0.802	1
Amp_5p15.33	Del_2q22.1	0.802	1
Amp_6q21	Del_16p13.3	0.802	1
ASXL2	ATM	0.803	1
CTNNB1	PLCXD3	0.803	1
CTNNB1	AGR3	0.803	1
CTNNB1	ADC	0.803	1
CTNNB1	DAZAP1	0.803	1
ELF3	DENND5B	0.803	1
ELF3	RBM26	0.803	1
ELF3	7q-Amp	0.803	1
FOXA1	PLCXD3	0.803	1
FOXA1	AGR3	0.803	1
FOXA1	RBP2	0.803	1
FOXA1	ADC	0.803	1
FOXA1	DAZAP1	0.803	1
FOXQ1	AGR3	0.803	1
FOXQ1	RBP2	0.803	1
FOXQ1	ADC	0.803	1
FOXQ1	DAZAP1	0.803	1
GPR50	RBP2	0.803	1
GPR50	ADC	0.803	1
HIST1H3B	GLTP	0.803	1
HIST1H3B	UNC93B1	0.803	1
KRAS	PLCXD3	0.803	1
KRAS	RBP2	0.803	1
KRAS	ADC	0.803	1
METTL3	RHOA	0.803	1
NFE2L3	AGR3	0.803	1
NFE2L3	RBP2	0.803	1
NFE2L3	ADC	0.803	1
NRAS	GNA13	0.803	1
NRAS	TMCO4	0.803	1
NRAS	17q-Amp	0.803	1
NRAS	Del_1q32.1	0.803	1
NRAS	Del_Xq21.33	0.803	1
PLCXD3	PTEN	0.803	1
PLCXD3	RUNX1	0.803	1
PLCXD3	CASP8	0.803	1
PLCXD3	DCDC1	0.803	1
PLCXD3	IKZF2	0.803	1
PLCXD3	THRAP3	0.803	1
PLCXD3	WAC	0.803	1
PLCXD3	BAP1	0.803	1
PLCXD3	CDH1	0.803	1
PLCXD3	EPS8	0.803	1
PLCXD3	1q-Amp	0.803	1
PLCXD3	Del_1p36.11	0.803	1
PSIP1	Amp_17q23.3	0.803	1
PSIP1	Del_3p14.2	0.803	1
PTEN	AGR3	0.803	1
PTEN	RBP2	0.803	1
PTEN	ADC	0.803	1
PTEN	DAZAP1	0.803	1
RUNX1	AGR3	0.803	1
RUNX1	ADC	0.803	1
RUNX1	DAZAP1	0.803	1
SF3B1	Amp_20q11.21	0.803	1
TP53	Amp_22q12.2	0.803	1
AGR3	DCDC1	0.803	1
AGR3	EXOSC10	0.803	1
AGR3	IKZF2	0.803	1
AGR3	THRAP3	0.803	1
AGR3	EPS8	0.803	1
AGR3	Del_1p36.11	0.803	1
CASP8	RBP2	0.803	1
CASP8	ADC	0.803	1
CDK12	GNA13	0.803	1
CDK12	TMCO4	0.803	1
CDK12	Amp_5p15.33	0.803	1
CDK12	Amp_19q13.43	0.803	1
CDK12	Del_Xq21.33	0.803	1
DCDC1	DAZAP1	0.803	1
DENND5B	Amp_17q23.3	0.803	1
EXOSC10	RBP2	0.803	1
EXOSC10	ADC	0.803	1
EXOSC10	DAZAP1	0.803	1
GLTP	GNA13	0.803	1
GLTP	17q-Amp	0.803	1
GLTP	Del_Xq21.33	0.803	1
IKZF2	RBP2	0.803	1
RBM26	Amp_17q23.3	0.803	1
RBP2	THRAP3	0.803	1
RBP2	WAC	0.803	1
RBP2	BAP1	0.803	1
RBP2	EPS8	0.803	1
RBP2	1q-Amp	0.803	1
RBP2	Del_1p36.11	0.803	1
THRAP3	ADC	0.803	1
THRAP3	DAZAP1	0.803	1
UBA52	TMCO4	0.803	1
UBA52	17q-Amp	0.803	1
UBA52	Del_1q32.1	0.803	1
UBA52	Del_Xq21.33	0.803	1
WAC	ADC	0.803	1
WAC	DAZAP1	0.803	1
ZBTB47	TMCO4	0.803	1
ZBTB47	17q-Amp	0.803	1
ZBTB47	Del_1q32.1	0.803	1
ZBTB47	Del_Xq21.33	0.803	1
ZNF750	ADC	0.803	1
ZNF750	DAZAP1	0.803	1
ADC	EPS8	0.803	1
ADC	Del_1p36.11	0.803	1
BAP1	DAZAP1	0.803	1
DAZAP1	1q-Amp	0.803	1
DAZAP1	Del_1p36.11	0.803	1
GNA13	HLA-A	0.803	1
GNA13	14q-Del	0.803	1
HLA-A	TMCO4	0.803	1
HLA-A	17q-Amp	0.803	1
HLA-A	Del_1q32.1	0.803	1
HLA-A	Del_Xq21.33	0.803	1
UNC93B1	17q-Amp	0.803	1
UNC93B1	Del_1q32.1	0.803	1
UNC93B1	Del_Xq21.33	0.803	1
17q-Amp	14q-Del	0.803	1
20q-Amp	8p-Del	0.803	1
7p-Amp	Amp_11q13.3	0.803	1
7q-Amp	Del_3p14.2	0.803	1
14q-Del	Del_Xq21.33	0.803	1
15q-Del	Amp_17q23.3	0.803	1
4p-Del	Amp_19q13.43	0.803	1
4p-Del	Del_Xq21.33	0.803	1
8p-Del	Del_11q23.3	0.803	1
Amp_11q22.2	Amp_20q11.21	0.803	1
Amp_17q12	Del_4q34.2	0.803	1
ARID1A	MBD1	0.804	1
ARID1A	PPARG	0.804	1
ASXL2	PIGS	0.804	1
ASXL2	POTEG	0.804	1
ASXL2	ZNF486	0.804	1
ASXL2	OR10Z1	0.804	1
C3orf70	KDM5A	0.804	1
C3orf70	Amp_4p16.3	0.804	1
CFHR4	Amp_7p21.1	0.804	1
CREBBP	CTCF	0.804	1
CREBBP	PPARG	0.804	1
CREBBP	PPP4R1	0.804	1
DIAPH2	ARID2	0.804	1
HRAS	EPHA2	0.804	1
HRAS	KDM5A	0.804	1
HRAS	NCOA1	0.804	1
IDH1	Amp_17q12	0.804	1
PROS1	Amp_5p15.33	0.804	1
TBC1D12	MARK2	0.804	1
TBC1D12	PPARG	0.804	1
TBC1D12	PPP4R1	0.804	1
ZFP36L1	TRERF1	0.804	1
ZFP36L2	HFM1	0.804	1
ZFP36L2	KDM5A	0.804	1
ZFP36L2	NCOA1	0.804	1
ZFP36L2	OGDH	0.804	1
ZFP36L2	Amp_4p16.3	0.804	1
ACTB	KDM5A	0.804	1
ACTB	OGDH	0.804	1
DPYS	Amp_5p15.33	0.804	1
DPYS	Amp_7p21.1	0.804	1
DPYS	Del_11q25	0.804	1
EPHA2	RIPK4	0.804	1
EPHA2	CUL1	0.804	1
EPHA2	3p-Amp	0.804	1
HFM1	RIPK4	0.804	1
HFM1	ZNF626	0.804	1
KDM5A	RIPK4	0.804	1
MARK2	Amp_5p15.33	0.804	1
MBD1	Del_11q25	0.804	1
NCOA1	3p-Amp	0.804	1
PPP4R1	Del_11q25	0.804	1
RIPK4	OGDH	0.804	1
USP28	Amp_7p21.1	0.804	1
WAC	8p-Del	0.804	1
CUL1	Amp_4p16.3	0.804	1
GNA13	Del_2q34	0.804	1
17q-Amp	Del_2q34	0.804	1
6q-Del	Del_2q22.1	0.804	1
Amp_3q26.33	Amp_8q22.3	0.804	1
Amp_8p11.23	Del_9p21.3	0.804	1
Amp_17q23.3	Del_13q14.2	0.804	1
Amp_19q12	Del_10q23.31	0.804	1
Del_2q34	Del_Xq21.33	0.804	1
C3orf70	Amp_11q13.3	0.805	1
C3orf70	Del_8p21.3	0.805	1
C3orf70	Del_10q23.31	0.805	1
CTNNB1	ARID1B	0.805	1
EP300	Del_10q23.31	0.805	1
ERCC2	TXNIP	0.805	1
FGFR3	Amp_19q13.43	0.805	1
FOXA1	PARD3	0.805	1
FOXQ1	KLF5	0.805	1
FOXQ1	7p-Amp	0.805	1
FOXQ1	4q-Del	0.805	1
GPR50	PARD3	0.805	1
GPR50	ARID1B	0.805	1
GPR50	4q-Del	0.805	1
HRAS	Amp_11q13.3	0.805	1
KLF5	IKZF2	0.805	1
KLF5	THRAP3	0.805	1
KLF5	WAC	0.805	1
KLF5	BAP1	0.805	1
KLF5	CDH1	0.805	1
KLF5	EPS8	0.805	1
KLF5	1q-Amp	0.805	1
KRAS	4q-Del	0.805	1
METTL3	Del_9p23	0.805	1
NFE2L3	PARD3	0.805	1
NFE2L3	ARID1B	0.805	1
NFE2L3	7p-Amp	0.805	1
PSIP1	Del_8p21.3	0.805	1
PTEN	7p-Amp	0.805	1
PTEN	4q-Del	0.805	1
RUNX1	PARD3	0.805	1
RUNX1	4q-Del	0.805	1
ACTB	Amp_11q13.3	0.805	1
ACTB	Del_8p21.3	0.805	1
CASP8	7p-Amp	0.805	1
DCDC1	PARD3	0.805	1
EPHA2	6q-Del	0.805	1
HFM1	10q-Del	0.805	1
HFM1	6q-Del	0.805	1
KDM5A	10q-Del	0.805	1
KDM5A	Del_15q13.1	0.805	1
NCOA1	3q-Amp	0.805	1
PARD3	WAC	0.805	1
PARD3	ZNF750	0.805	1
PARD3	CDH1	0.805	1
RIPK4	Del_10q23.31	0.805	1
SLC9A4	Amp_11q13.3	0.805	1
SLC9A4	Del_8p21.3	0.805	1
THRAP3	ARID1B	0.805	1
THRAP3	4q-Del	0.805	1
ZNF626	Del_10q23.31	0.805	1
ZNF750	7p-Amp	0.805	1
ZNF750	4q-Del	0.805	1
ARID1B	BAP1	0.805	1
ARID1B	CDH1	0.805	1
ARID1B	EPS8	0.805	1
ARID1B	1q-Amp	0.805	1
BAP1	7p-Amp	0.805	1
BAP1	4q-Del	0.805	1
CDH1	7p-Amp	0.805	1
OGDH	10q-Del	0.805	1
3q-Amp	Amp_4p16.3	0.805	1
8q-Amp	Del_2q22.1	0.805	1
17p-Del	Amp_11q13.3	0.805	1
Del_2q22.1	Del_18q23	0.805	1
ERBB2	Del_11p15.5	0.806	1
HIST1H3B	Del_9p21.3	0.806	1
NHLRC1	Amp_3p25.2	0.806	1
PLCXD3	Amp_3q26.33	0.806	1
PLCXD3	Del_10q23.31	0.806	1
RB1	20p-Amp	0.806	1
ZFP36L1	Amp_11q13.3	0.806	1
ZFP36L1	Del_10q23.31	0.806	1
AGR3	Amp_11q13.3	0.806	1
AGR3	Del_10q23.31	0.806	1
CDKN2AIPNL	Amp_1q21.3	0.806	1
DLX6	9q-Del	0.806	1
DLX6	Del_5q12.1	0.806	1
RBP2	Amp_3q26.33	0.806	1
TAF11	Amp_3p25.2	0.806	1
DAZAP1	Amp_3q26.33	0.806	1
DAZAP1	Del_10q23.31	0.806	1
FUT5	Del_5q12.1	0.806	1
SCARF2	Amp_3p25.2	0.806	1
14q-Del	Del_9p21.3	0.806	1
4p-Del	Del_9p21.3	0.806	1
Amp_1p34.2	Del_10q23.31	0.806	1
Del_1q32.1	Del_9p21.3	0.806	1
CNNM4	6q-Del	0.807	1
CNNM4	Del_15q13.1	0.807	1
COPZ2	4p-Del	0.807	1
ELF3	NRAS	0.807	1
ELF3	GLTP	0.807	1
ELF3	HLA-A	0.807	1
ERCC2	22q-Del	0.807	1
GPR50	Del_8p21.3	0.807	1
GPS2	3q-Amp	0.807	1
GPS2	10q-Del	0.807	1
GTF2I	DENND5B	0.807	1
GTF2I	15q-Del	0.807	1
KPTN	CDK12	0.807	1
KPTN	14q-Del	0.807	1
MIPOL1	10q-Del	0.807	1
NRAS	Del_3p14.2	0.807	1
PSIP1	TXNIP	0.807	1
PTTG1IP	CDK12	0.807	1
PTTG1IP	14q-Del	0.807	1
PTTG1IP	4p-Del	0.807	1
RB1	Del_4q22.1	0.807	1
RHOB	11q-Del	0.807	1
RUNX1	Del_8p21.3	0.807	1
RXRA	Amp_1q23.3	0.807	1
SF1	10q-Del	0.807	1
SF1	Del_15q13.1	0.807	1
ZNF511	3q-Amp	0.807	1
DENND5B	ITGA4	0.807	1
DENND5B	NEK11	0.807	1
GLTP	Del_3p14.2	0.807	1
ITGA4	RBM26	0.807	1
ITGA4	15q-Del	0.807	1
NEK11	7q-Amp	0.807	1
NKX2-2	3q-Amp	0.807	1
RBM26	DNAH6	0.807	1
SSH3	7q-Amp	0.807	1
TFG	3q-Amp	0.807	1
TFG	6q-Del	0.807	1
TFG	Del_15q13.1	0.807	1
TXNIP	7q-Amp	0.807	1
UBA52	Amp_17q23.3	0.807	1
WAC	Del_8p21.3	0.807	1
DNAH6	15q-Del	0.807	1
EPS8	Del_8p21.3	0.807	1
HLA-A	Amp_17q23.3	0.807	1
TMCO4	Amp_3p25.2	0.807	1
UNC93B1	Amp_17q23.3	0.807	1
17q-Amp	Amp_3p25.2	0.807	1
22q-Del	Amp_1q23.3	0.807	1
9q-Del	Amp_8p11.23	0.807	1
9q-Del	Del_16p13.3	0.807	1
Amp_1q23.3	Amp_11q22.2	0.807	1
Del_1p36.11	Del_8p21.3	0.807	1
ATM	KDM6A	0.808	1
EP300	MIPOL1	0.808	1
EP300	NAA15	0.808	1
EP300	NDC80	0.808	1
FGFR3	ASXL1	0.808	1
FGFR3	Del_12p13.1	0.808	1
HORMAD1	ZFP36L1	0.808	1
KDM6A	Del_14q24.1	0.808	1
MIPOL1	11p-Del	0.808	1
MIPOL1	17p-Del	0.808	1
RPTN	17p-Del	0.808	1
SF3B1	Del_17p12	0.808	1
ZBTB7B	ZFP36L1	0.808	1
ZFP36L1	PSMC6	0.808	1
ZFP36L1	ZNF773	0.808	1
ZFP36L2	Del_2q37.1	0.808	1
ZNF511	11p-Del	0.808	1
ZNF511	17p-Del	0.808	1
EPHA2	Amp_19q12	0.808	1
HSP90AA1	Amp_8p11.23	0.808	1
MYO16	Del_17p12	0.808	1
NCOA1	Amp_19q12	0.808	1
NKX2-2	11p-Del	0.808	1
PSMC6	Amp_1p34.2	0.808	1
RARG	11p-Del	0.808	1
SLC9A4	Del_2q37.1	0.808	1
STK32B	Amp_1p34.2	0.808	1
ZNF773	Amp_1p34.2	0.808	1
11p-Del	Amp_4q13.3	0.808	1
16p-Del	Del_17p12	0.808	1
17p-Del	Amp_4q13.3	0.808	1
Amp_8p11.23	Del_12p13.1	0.808	1
Amp_10p14	Del_2q22.1	0.808	1
CDKN2A	Del_18q23	0.809	1
CSMD3	GTF2I	0.809	1
CSMD3	NEK11	0.809	1
ERBB2	11p-Del	0.809	1
NRAS	Del_9p23	0.809	1
RB1	Del_15q13.1	0.809	1
RHOB	Del_18q23	0.809	1
GLTP	Del_9p23	0.809	1
NCOA1	Del_5q12.1	0.809	1
HLA-A	Del_9p23	0.809	1
3q-Amp	9p-Del	0.809	1
8q-Amp	Amp_13q22.1	0.809	1
10q-Del	9p-Del	0.809	1
11p-Del	Amp_19q12	0.809	1
ASXL2	Amp_19q13.43	0.81	1
CDKN1A	Del_19p13.3	0.81	1
CDKN2A	Del_2q37.1	0.81	1
CTNNB1	Amp_12q15	0.81	1
CTNNB1	Del_6p25.3	0.81	1
ELF3	FGFR3	0.81	1
ELF3	STAG2	0.81	1
EP300	ATAD5	0.81	1
FGFR3	Amp_17q23.3	0.81	1
FOXA1	Amp_13q22.1	0.81	1
FOXA1	Del_6p25.3	0.81	1
FOXQ1	Amp_13q22.1	0.81	1
GPR50	Del_16q23.1	0.81	1
IDH1	POTEG	0.81	1
IDH1	ZNF486	0.81	1
IDH1	UGP2	0.81	1
KRAS	Del_16q23.1	0.81	1
NFE2L2	Del_5q12.1	0.81	1
PIGS	POTEG	0.81	1
PIGS	ZNF486	0.81	1
PIGS	OR10Z1	0.81	1
PIGS	UGP2	0.81	1
PIGS	FUS	0.81	1
PKHD1	17p-Del	0.81	1
POTEG	ZNF486	0.81	1
POTEG	OR10Z1	0.81	1
POTEG	UGP2	0.81	1
PSIP1	CDKN2AIPNL	0.81	1
PTEN	Amp_13q22.1	0.81	1
RUNX1	Amp_12q15	0.81	1
RUNX1	Del_6p25.3	0.81	1
SARNP	ZNF486	0.81	1
SARNP	FUS	0.81	1
ZNF486	FUS	0.81	1
CASP8	Amp_12q15	0.81	1
CDKN2AIPNL	DENND5B	0.81	1
CDKN2AIPNL	7q-Amp	0.81	1
CDKN2AIPNL	15q-Del	0.81	1
DCDC1	Amp_13q22.1	0.81	1
EXOSC10	Amp_13q22.1	0.81	1
IKZF2	Del_6p25.3	0.81	1
IKZF2	Del_16q23.1	0.81	1
MED13	11p-Del	0.81	1
OR10Z1	UGP2	0.81	1
OR10Z1	FUS	0.81	1
THRAP3	Amp_13q22.1	0.81	1
UGP2	FUS	0.81	1
WAC	Del_6p25.3	0.81	1
ZNF750	Amp_13q22.1	0.81	1
ZNF750	Del_16q23.1	0.81	1
11p-Del	Amp_16p13.2	0.81	1
17p-Del	Amp_16p13.2	0.81	1
5q-Del	Amp_11q13.3	0.81	1
Amp_8p11.23	Amp_17q23.3	0.81	1
Amp_17q12	Amp_19q13.43	0.81	1
Del_1p36.11	Del_6p25.3	0.81	1
CDKN2A	KLF5	0.811	1
CDKN2A	PARD3	0.811	1
CDKN2A	ARID1B	0.811	1
CDKN2A	7p-Amp	0.811	1
DIAPH2	RPTN	0.811	1
DIAPH2	ZNF180	0.811	1
DIAPH2	DDX3X	0.811	1
DIAPH2	NAA15	0.811	1
DIAPH2	19q-Amp	0.811	1
DIAPH2	Amp_4q13.3	0.811	1
ERBB3	Amp_17q23.3	0.811	1
GTF2I	DLX6	0.811	1
KLF5	RHOB	0.811	1
RPTN	CPD	0.811	1
RPTN	FAM47C	0.811	1
ZNF180	SF3B3	0.811	1
DDX3X	SF3B3	0.811	1
DDX3X	FAM47C	0.811	1
DLX6	ITGA4	0.811	1
DLX6	PPARGC1A	0.811	1
DLX6	SSH3	0.811	1
DLX6	DNAH6	0.811	1
ITGA4	ZNF185	0.811	1
NAA15	TRERF1	0.811	1
NDC80	RBM10	0.811	1
NDC80	SF3B3	0.811	1
NDC80	TRERF1	0.811	1
NEK11	FUT5	0.811	1
NEK11	ZNF185	0.811	1
PPARGC1A	FUT5	0.811	1
PPARGC1A	ZNF185	0.811	1
RARG	SF3B3	0.811	1
RARG	FAM47C	0.811	1
RBM10	19q-Amp	0.811	1
SF3B3	19q-Amp	0.811	1
SF3B3	Amp_4q13.3	0.811	1
TRERF1	19q-Amp	0.811	1
TRERF1	Amp_4q13.3	0.811	1
TXNIP	FUT5	0.811	1
TXNIP	ZNF185	0.811	1
CNOT1	Amp_4q13.3	0.811	1
DNAH6	FUT5	0.811	1
DNAH6	ZNF185	0.811	1
FAM47C	Del_7q36.3	0.811	1
FUT5	Del_13q14.2	0.811	1
ASXL2	Amp_13q22.1	0.812	1
ASXL2	Del_6p25.3	0.812	1
ASXL2	Del_16q23.1	0.812	1
ATM	PLCXD3	0.812	1
ATM	AGR3	0.812	1
ATM	RBP2	0.812	1
ATM	ADC	0.812	1
BTG2	ZNF511	0.812	1
BTG2	TFG	0.812	1
BTG2	Del_11p15.5	0.812	1
C12orf43	GPS2	0.812	1
C12orf43	SF1	0.812	1
C12orf43	NKX2-2	0.812	1
CDKN1A	SARNP	0.812	1
CDKN1A	OR10Z1	0.812	1
CNNM4	HIST1H2AG	0.812	1
CNNM4	NHLRC1	0.812	1
CNNM4	TGIF2LX	0.812	1
CNNM4	CCNE2	0.812	1
CNNM4	PHLDA3	0.812	1
CNNM4	SNRPB	0.812	1
CNNM4	TAF11	0.812	1
CNNM4	19p-Del	0.812	1
DIAPH2	Del_16q23.1	0.812	1
ERBB3	ASXL1	0.812	1
FOXA1	Del_5q12.1	0.812	1
FOXQ1	Del_5q12.1	0.812	1
GPS2	HIST1H2AG	0.812	1
GPS2	TGIF2LX	0.812	1
GPS2	CCNE2	0.812	1
GPS2	IL10RB	0.812	1
GPS2	LETMD1	0.812	1
GPS2	SNRPB	0.812	1
GPS2	SCARF2	0.812	1
GPS2	19p-Del	0.812	1
HIST1H2AG	MIPOL1	0.812	1
HIST1H2AG	SF1	0.812	1
HIST1H2AG	ZNF511	0.812	1
HIST1H2AG	NKX2-2	0.812	1
HIST1H2AG	TFG	0.812	1
HORMAD1	Del_8p21.3	0.812	1
IDH1	11q-Del	0.812	1
IDH1	Del_19p13.3	0.812	1
KDM6A	POTEG	0.812	1
KDM6A	OR10Z1	0.812	1
KDM6A	3q-Amp	0.812	1
MIPOL1	NHLRC1	0.812	1
MIPOL1	TGIF2LX	0.812	1
MIPOL1	IL10RB	0.812	1
MIPOL1	LETMD1	0.812	1
MIPOL1	PHLDA3	0.812	1
MIPOL1	TAF11	0.812	1
MIPOL1	SCARF2	0.812	1
MIPOL1	19p-Del	0.812	1
NHLRC1	SF1	0.812	1
NHLRC1	ZNF511	0.812	1
NHLRC1	TFG	0.812	1
PIGS	5q-Del	0.812	1
POTEG	5q-Del	0.812	1
PTEN	Del_5q12.1	0.812	1
PTTG1IP	Amp_1q23.3	0.812	1
RB1	14q-Del	0.812	1
RHOB	Del_6q27	0.812	1
RHOB	Del_11q25	0.812	1
SARNP	Del_19p13.3	0.812	1
SF1	TGIF2LX	0.812	1
SF1	CCNE2	0.812	1
SF1	IL10RB	0.812	1
SF1	PHLDA3	0.812	1
SF1	SNRPB	0.812	1
SF1	TAF11	0.812	1
SF1	SCARF2	0.812	1
SF1	19p-Del	0.812	1
TGIF2LX	ZNF511	0.812	1
TGIF2LX	NKX2-2	0.812	1
TGIF2LX	Del_11p15.5	0.812	1
TP53	PARD3	0.812	1
TP53	ARID1B	0.812	1
ZFP36L1	Amp_3p25.2	0.812	1
ZNF486	Del_19p13.3	0.812	1
ZNF511	CCNE2	0.812	1
ZNF511	IL10RB	0.812	1
ZNF511	PHLDA3	0.812	1
ZNF511	SNRPB	0.812	1
ZNF511	19p-Del	0.812	1
ARID2	Amp_3p25.2	0.812	1
CPD	Del_6p25.3	0.812	1
DCDC1	Del_5q12.1	0.812	1
EXOSC10	9q-Del	0.812	1
EXOSC10	Del_5q12.1	0.812	1
FAT1	Amp_16p13.2	0.812	1
IKZF2	9q-Del	0.812	1
IKZF2	Del_5q12.1	0.812	1
IL10RB	NKX2-2	0.812	1
IL10RB	TFG	0.812	1
LETMD1	NKX2-2	0.812	1
NKX2-2	TAF11	0.812	1
NKX2-2	SCARF2	0.812	1
NKX2-2	19p-Del	0.812	1
PHLDA3	TFG	0.812	1
RBM10	Del_16q23.1	0.812	1
SNRPB	TFG	0.812	1
SNRPB	Del_11p15.5	0.812	1
TAF11	TFG	0.812	1
TAF11	Del_11p15.5	0.812	1
TFG	SCARF2	0.812	1
TFG	19p-Del	0.812	1
TRERF1	Del_6p25.3	0.812	1
TRERF1	Del_16q23.1	0.812	1
UGP2	Del_19p13.3	0.812	1
WAC	9q-Del	0.812	1
BAP1	9q-Del	0.812	1
BAP1	Del_5q12.1	0.812	1
CNOT3	Del_8p21.3	0.812	1
FAM47C	Del_16q23.1	0.812	1
FUS	11q-Del	0.812	1
19p-Del	Del_11p15.5	0.812	1
Amp_17q12	Del_6p25.3	0.812	1
ASXL2	Amp_22q12.2	0.813	1
CDKN2A	PIK3CA	0.813	1
CDKN2A	PTTG1IP	0.813	1
CFHR4	RB1	0.813	1
COPZ2	RHOB	0.813	1
ELF3	MARK2	0.813	1
ELF3	PPARG	0.813	1
ELF3	USP28	0.813	1
ELF3	Del_Xp11.3	0.813	1
FBXW7	ARID2	0.813	1
FOXA1	Del_9p21.3	0.813	1
GTF2I	Amp_3p25.2	0.813	1
HIST1H3B	FAT1	0.813	1
KPTN	RHOB	0.813	1
PKHD1	Amp_1p34.2	0.813	1
PROS1	Amp_17q23.3	0.813	1
PTTG1IP	RHOB	0.813	1
RB1	CTCF	0.813	1
RB1	DPYS	0.813	1
RB1	MARK2	0.813	1
RB1	PPARG	0.813	1
RB1	USP28	0.813	1
ZFP36L1	Del_22q13.32	0.813	1
ARID2	Amp_16p13.2	0.813	1
CTCF	Del_3p14.2	0.813	1
DCDC1	Del_9p21.3	0.813	1
FAT1	17q-Amp	0.813	1
MARK2	Amp_17q23.3	0.813	1
MARK2	Del_3p14.2	0.813	1
MED13	Amp_1p34.2	0.813	1
PPARG	Amp_17q23.3	0.813	1
PPP4R1	9p-Del	0.813	1
17q-Amp	20q-Amp	0.813	1
1q-Amp	Del_9p21.3	0.813	1
17p-Del	Amp_3p25.2	0.813	1
Amp_1p34.2	Amp_16p13.2	0.813	1
Amp_1p34.2	Del_22q13.32	0.813	1
Del_3p14.2	Del_Xp11.3	0.813	1
ATM	7p-Amp	0.814	1
C3orf70	CDKN1A	0.814	1
CDKN1A	HRAS	0.814	1
CDKN1A	ACTB	0.814	1
CDKN1A	SLC9A4	0.814	1
CDKN1A	CUL1	0.814	1
CFHR4	RXRA	0.814	1
CFHR4	SF3B1	0.814	1
CNNM4	8q-Amp	0.814	1
GPS2	Del_18q23	0.814	1
HRAS	11q-Del	0.814	1
MIPOL1	8q-Amp	0.814	1
NFE2L2	PROS1	0.814	1
NFE2L2	MARK2	0.814	1
NFE2L2	USP28	0.814	1
PIGS	Amp_10p14	0.814	1
PROS1	SF3B1	0.814	1
PROS1	Amp_8q22.3	0.814	1
PROS1	Amp_11q22.2	0.814	1
RXRA	CTCF	0.814	1
RXRA	MARK2	0.814	1
RXRA	PPARG	0.814	1
RXRA	Del_Xp11.3	0.814	1
SF1	8q-Amp	0.814	1
SF1	Del_18q23	0.814	1
SF3B1	CTCF	0.814	1
SF3B1	MARK2	0.814	1
SF3B1	MBD1	0.814	1
SF3B1	PPARG	0.814	1
ZFP36L2	11q-Del	0.814	1
ZNF511	Del_18q23	0.814	1
CDK12	HSP90AA1	0.814	1
CTCF	22q-Del	0.814	1
DPYS	MYO16	0.814	1
DPYS	Amp_8q22.3	0.814	1
MARK2	16p-Del	0.814	1
MARK2	Amp_8q22.3	0.814	1
MBD1	MYO16	0.814	1
MBD1	22q-Del	0.814	1
MBD1	Amp_11q22.2	0.814	1
MYO16	PPARG	0.814	1
MYO16	PPP4R1	0.814	1
NKX2-2	8q-Amp	0.814	1
NKX2-2	Del_18q23	0.814	1
PARD3	Del_4q34.2	0.814	1
PPARG	Amp_8q22.3	0.814	1
PPP4R1	16p-Del	0.814	1
PPP4R1	22q-Del	0.814	1
PPP4R1	Amp_11q22.2	0.814	1
RIPK4	5q-Del	0.814	1
RIPK4	Del_19p13.3	0.814	1
TFG	Del_18q23	0.814	1
UGP2	Amp_10p14	0.814	1
ZNF626	11q-Del	0.814	1
ZNF626	5q-Del	0.814	1
ASXL1	14q-Del	0.814	1
ASXL1	4p-Del	0.814	1
8q-Amp	Del_4q22.1	0.814	1
22q-Del	Del_Xp11.3	0.814	1
Amp_11q22.2	Del_Xp11.3	0.814	1
ATM	HRAS	0.815	1
ATM	SLC9A4	0.815	1
CDKN2A	HIST1H3B	0.815	1
CDKN2A	17q-Amp	0.815	1
EP300	PSIP1	0.815	1
HIST1H3B	TP53	0.815	1
METTL3	FAT1	0.815	1
RB1	Amp_1q23.3	0.815	1
RHOB	GNA13	0.815	1
RHOB	Del_Xq21.33	0.815	1
RPTN	Amp_1q21.3	0.815	1
ZFP36L2	Del_4q34.2	0.815	1
ZNF180	Amp_1q21.3	0.815	1
ACTB	Del_4q34.2	0.815	1
DDX3X	Amp_1q21.3	0.815	1
NCOA1	Amp_1q21.3	0.815	1
RARG	Amp_1q21.3	0.815	1
RBM26	17p-Del	0.815	1
SLC9A4	Del_4q34.2	0.815	1
CUL1	Del_4q34.2	0.815	1
SPTAN1	11q-Del	0.815	1
19q-Amp	Amp_1q21.3	0.815	1
7p-Amp	18q-Del	0.815	1
7p-Amp	Del_14q24.1	0.815	1
ASXL2	Amp_6p22.3	0.816	1
CFHR4	PLCXD3	0.816	1
CFHR4	RBP2	0.816	1
CFHR4	DAZAP1	0.816	1
ERBB2	Del_14q24.1	0.816	1
ERCC2	PIK3CA	0.816	1
HIST1H2AG	Del_14q24.1	0.816	1
NHLRC1	18q-Del	0.816	1
NHLRC1	Del_14q24.1	0.816	1
PLCXD3	PROS1	0.816	1
PLCXD3	DPYS	0.816	1
PLCXD3	MARK2	0.816	1
PLCXD3	MBD1	0.816	1
PLCXD3	PPP4R1	0.816	1
PLCXD3	USP28	0.816	1
PROS1	RBP2	0.816	1
PROS1	ADC	0.816	1
PROS1	DAZAP1	0.816	1
TGIF2LX	18q-Del	0.816	1
AGR3	DPYS	0.816	1
AGR3	MARK2	0.816	1
AGR3	MBD1	0.816	1
AGR3	PPARG	0.816	1
AGR3	PPP4R1	0.816	1
AGR3	USP28	0.816	1
CTCF	ADC	0.816	1
DPYS	RBP2	0.816	1
DPYS	ADC	0.816	1
DPYS	DAZAP1	0.816	1
MARK2	RBP2	0.816	1
MBD1	RBP2	0.816	1
MBD1	ADC	0.816	1
PHLDA3	18q-Del	0.816	1
PHLDA3	Del_14q24.1	0.816	1
PPARG	ADC	0.816	1
PPP4R1	RBP2	0.816	1
PPP4R1	ADC	0.816	1
PPP4R1	DAZAP1	0.816	1
RBP2	USP28	0.816	1
RBP2	Del_Xp11.3	0.816	1
USP28	ADC	0.816	1
WAC	Del_9p23	0.816	1
CDH1	Del_9p23	0.816	1
DAZAP1	Del_Xp11.3	0.816	1
1q-Amp	Del_9p23	0.816	1
18q-Del	19p-Del	0.816	1
18q-Del	Amp_19q12	0.816	1
Amp_17q12	Del_8p23.3	0.816	1
CNNM4	FBXW7	0.817	1
CNNM4	PKHD1	0.817	1
CNNM4	ATAD5	0.817	1
CREBBP	Amp_7p21.1	0.817	1
CSMD3	4p-Del	0.817	1
ERBB2	10q-Del	0.817	1
ERBB2	Amp_17q23.3	0.817	1
FBXW7	MIPOL1	0.817	1
FBXW7	ZNF511	0.817	1
FBXW7	HFM1	0.817	1
FBXW7	TFG	0.817	1
FBXW7	Amp_4p16.3	0.817	1
GPS2	PKHD1	0.817	1
GPS2	MED13	0.817	1
HORMAD1	Amp_11q13.3	0.817	1
HORMAD1	Del_10q23.31	0.817	1
NF2	Del_10q23.31	0.817	1
PKHD1	NKX2-2	0.817	1
PKHD1	TFG	0.817	1
RPTN	8q-Amp	0.817	1
RPTN	Del_18q23	0.817	1
SF1	MED13	0.817	1
SF1	Amp_16p13.2	0.817	1
TP53	DLX6	0.817	1
TP53	FUT5	0.817	1
TP53	ZNF185	0.817	1
ZNF511	MED13	0.817	1
ZNF511	Amp_16p13.2	0.817	1
ATAD5	EPHA2	0.817	1
ATAD5	OGDH	0.817	1
HFM1	MED13	0.817	1
HFM1	Amp_16p13.2	0.817	1
KDM5A	MED13	0.817	1
NCOA1	Amp_16p13.2	0.817	1
NDC80	Del_18q23	0.817	1
NKX2-2	Amp_16p13.2	0.817	1
TFG	Amp_16p13.2	0.817	1
ARID1B	Amp_1q21.3	0.817	1
8q-Amp	Amp_4q13.3	0.817	1
8q-Amp	Del_7q36.3	0.817	1
10q-Del	Amp_19q12	0.817	1
Amp_3q26.33	Amp_6q21	0.817	1
Amp_19q12	Del_3p14.2	0.817	1
Del_7q36.3	Del_18q23	0.817	1
ASXL2	TP53	0.818	1
CREBBP	EPHA2	0.818	1
CREBBP	HFM1	0.818	1
CREBBP	OGDH	0.818	1
CREBBP	Amp_4p16.3	0.818	1
CTNNB1	ASXL1	0.818	1
CTNNB1	Del_12p13.1	0.818	1
FGFR3	NEK11	0.818	1
FGFR3	DNAH6	0.818	1
FOXA1	HSP90AA1	0.818	1
FOXA1	Del_12p13.1	0.818	1
FOXQ1	HSP90AA1	0.818	1
FOXQ1	Del_12p13.1	0.818	1
GPR50	HSP90AA1	0.818	1
GPR50	Del_12p13.1	0.818	1
GTF2I	Amp_8p11.23	0.818	1
GTF2I	Del_16p13.3	0.818	1
HIST1H3B	KDM6A	0.818	1
HORMAD1	NRAS	0.818	1
HORMAD1	GLTP	0.818	1
HORMAD1	UBA52	0.818	1
HORMAD1	UNC93B1	0.818	1
KDM6A	TMCO4	0.818	1
KDM6A	Del_Xq21.33	0.818	1
KRAS	HSP90AA1	0.818	1
KRAS	ASXL1	0.818	1
KRAS	Del_12p13.1	0.818	1
NF2	NRAS	0.818	1
NF2	GLTP	0.818	1
NF2	ZBTB47	0.818	1
NF2	HLA-A	0.818	1
NFE2L3	HSP90AA1	0.818	1
NFE2L3	ASXL1	0.818	1
NRAS	ZBTB7B	0.818	1
NRAS	PSMC6	0.818	1
NRAS	STK32B	0.818	1
NRAS	CNOT3	0.818	1
NRAS	ZNF773	0.818	1
PIK3CA	TP53	0.818	1
PTEN	HSP90AA1	0.818	1
PTEN	ASXL1	0.818	1
PTEN	Del_12p13.1	0.818	1
RUNX1	HSP90AA1	0.818	1
STAG2	PPARGC1A	0.818	1
TBC1D12	EPHA2	0.818	1
TP53	Amp_17q12	0.818	1
ZBTB7B	GLTP	0.818	1
ZBTB7B	UBA52	0.818	1
ZBTB7B	HLA-A	0.818	1
ZBTB7B	UNC93B1	0.818	1
DCDC1	ASXL1	0.818	1
EPHA2	Amp_7p21.1	0.818	1
EPHA2	Del_11q25	0.818	1
EXOSC10	Del_12p13.1	0.818	1
GLTP	PSMC6	0.818	1
GLTP	STK32B	0.818	1
GLTP	CNOT3	0.818	1
GLTP	ZNF773	0.818	1
GLTP	Amp_6q21	0.818	1
HFM1	Amp_7p21.1	0.818	1
HFM1	Del_6q27	0.818	1
HSP90AA1	IKZF2	0.818	1
HSP90AA1	ZNF750	0.818	1
HSP90AA1	CDH1	0.818	1
HSP90AA1	1q-Amp	0.818	1
HSP90AA1	Del_1p36.11	0.818	1
KDM5A	Del_11q25	0.818	1
KDM5A	Del_13q14.2	0.818	1
NEK11	Del_16p13.3	0.818	1
PARD3	Amp_5p15.33	0.818	1
PSMC6	HLA-A	0.818	1
STK32B	ZBTB47	0.818	1
STK32B	HLA-A	0.818	1
THRAP3	ASXL1	0.818	1
UBA52	CNOT3	0.818	1
UBA52	Amp_6q21	0.818	1
WAC	ASXL1	0.818	1
ZBTB47	CNOT3	0.818	1
ZBTB47	ZNF773	0.818	1
ZNF750	Del_12p13.1	0.818	1
ARID1B	Amp_5p15.33	0.818	1
ASXL1	BAP1	0.818	1
ASXL1	CDH1	0.818	1
ASXL1	EPS8	0.818	1
ASXL1	Del_1p36.11	0.818	1
BAP1	Del_12p13.1	0.818	1
CDH1	Del_12p13.1	0.818	1
CNOT3	HLA-A	0.818	1
CNOT3	UNC93B1	0.818	1
DNAH6	Del_16p13.3	0.818	1
SPTAN1	Amp_1q21.3	0.818	1
UNC93B1	ZNF773	0.818	1
UNC93B1	Amp_6q21	0.818	1
Amp_1p34.2	Del_4q34.2	0.818	1
Amp_4p16.3	Del_6q27	0.818	1
Del_1p36.11	Del_12p13.1	0.818	1
FOXA1	20p-Amp	0.819	1
FOXQ1	20p-Amp	0.819	1
KDM6A	Amp_22q12.2	0.819	1
PIK3CA	GLTP	0.819	1
PIK3CA	ZBTB47	0.819	1
PIK3CA	HLA-A	0.819	1
RUNX1	20p-Amp	0.819	1
CDKN2AIPNL	EPHA2	0.819	1
CDKN2AIPNL	HFM1	0.819	1
CDKN2AIPNL	KDM5A	0.819	1
CDKN2AIPNL	NCOA1	0.819	1
CDKN2AIPNL	OGDH	0.819	1
DCDC1	20p-Amp	0.819	1
DCDC1	Del_22q13.32	0.819	1
EXOSC10	20p-Amp	0.819	1
WAC	20p-Amp	0.819	1
BAP1	20p-Amp	0.819	1
BAP1	Del_22q13.32	0.819	1
CDH1	20p-Amp	0.819	1
20p-Amp	Del_1p36.11	0.819	1
Amp_16p13.2	Del_17p12	0.819	1
Del_1p36.11	Del_22q13.32	0.819	1
C3orf70	RHOA	0.82	1
COPZ2	Amp_22q12.2	0.82	1
FOXA1	Del_13q14.2	0.82	1
FOXQ1	Del_13q14.2	0.82	1
HRAS	METTL3	0.82	1
HRAS	RHOA	0.82	1
HRAS	SHANK1	0.82	1
KPTN	Amp_22q12.2	0.82	1
METTL3	ZNF626	0.82	1
METTL3	3p-Amp	0.82	1
NF1	Del_2q34	0.82	1
NFE2L3	Del_13q14.2	0.82	1
NRAS	SPTAN1	0.82	1
PTTG1IP	Amp_22q12.2	0.82	1
RHOA	3p-Amp	0.82	1
RUNX1	Del_13q14.2	0.82	1
SF3B1	Del_13q14.2	0.82	1
SHANK1	3p-Amp	0.82	1
GLTP	SPTAN1	0.82	1
GLTP	Amp_7p11.2	0.82	1
IKZF2	Del_13q14.2	0.82	1
MYO16	Del_4q22.1	0.82	1
OR10Z1	8p-Del	0.82	1
UBA52	SPTAN1	0.82	1
WAC	Del_13q14.2	0.82	1
ZBTB47	SPTAN1	0.82	1
ZNF750	Del_13q14.2	0.82	1
HLA-A	SPTAN1	0.82	1
SPTAN1	20q-Amp	0.82	1
Amp_11q13.3	Del_18q23	0.82	1
Amp_19q12	Del_4q34.2	0.82	1
ELF3	PIK3CA	0.821	1
NF1	Amp_1q23.3	0.821	1
PSIP1	Amp_3p25.2	0.821	1
ZNF486	Amp_19q13.43	0.821	1
DDX3X	Del_14q24.1	0.821	1
NAA15	18q-Del	0.821	1
NAA15	Del_14q24.1	0.821	1
NEK11	Amp_5p15.33	0.821	1
RARG	18q-Del	0.821	1
RARG	Del_14q24.1	0.821	1
ZNF773	Amp_1q21.3	0.821	1
19q-Amp	Del_14q24.1	0.821	1
Amp_4q13.3	Del_14q24.1	0.821	1
Del_1q32.1	Del_2q22.1	0.821	1
ATM	EP300	0.822	1
ERBB2	Amp_22q12.2	0.822	1
GTF2I	EPHA2	0.822	1
GTF2I	HFM1	0.822	1
GTF2I	KDM5A	0.822	1
PROS1	Del_17p12	0.822	1
RPTN	FUT5	0.822	1
RPTN	ZNF185	0.822	1
ZNF180	DLX6	0.822	1
ZNF180	FUT5	0.822	1
ZNF180	Amp_6p22.3	0.822	1
DDX3X	DLX6	0.822	1
DDX3X	FUT5	0.822	1
DDX3X	ZNF185	0.822	1
DLX6	NAA15	0.822	1
DLX6	NDC80	0.822	1
DLX6	RARG	0.822	1
DLX6	19q-Amp	0.822	1
DLX6	Amp_4q13.3	0.822	1
DLX6	Del_7q36.3	0.822	1
EPHA2	ITGA4	0.822	1
HFM1	SSH3	0.822	1
HFM1	TXNIP	0.822	1
HFM1	DNAH6	0.822	1
ITGA4	KDM5A	0.822	1
ITGA4	OGDH	0.822	1
KDM5A	PPARGC1A	0.822	1
KDM5A	SSH3	0.822	1
KDM5A	TXNIP	0.822	1
KDM5A	DNAH6	0.822	1
MBD1	Del_17p12	0.822	1
MED13	8q-Amp	0.822	1
MED13	Del_18q23	0.822	1
NAA15	FUT5	0.822	1
NAA15	ZNF185	0.822	1
NDC80	ZNF185	0.822	1
NEK11	OGDH	0.822	1
RARG	FUT5	0.822	1
RARG	ZNF185	0.822	1
RARG	Amp_6p22.3	0.822	1
TXNIP	Amp_4p16.3	0.822	1
DNAH6	Amp_4p16.3	0.822	1
FUT5	19q-Amp	0.822	1
FUT5	Amp_4q13.3	0.822	1
FUT5	Del_7q36.3	0.822	1
ZNF185	19q-Amp	0.822	1
ZNF185	Amp_4q13.3	0.822	1
ZNF185	Del_7q36.3	0.822	1
7q-Amp	Del_17p12	0.822	1
Amp_1q21.3	Del_9p23	0.822	1
Amp_6p22.3	Del_7q36.3	0.822	1
ASXL2	EP300	0.823	1
ERCC2	NHLRC1	0.823	1
ERCC2	CCNE2	0.823	1
ERCC2	TAF11	0.823	1
ERCC2	SCARF2	0.823	1
ERCC2	19p-Del	0.823	1
METTL3	Amp_10p14	0.823	1
PSIP1	ARID2	0.823	1
RXRA	20q-Amp	0.823	1
SHANK1	Amp_10p14	0.823	1
ZFP36L1	DENND5B	0.823	1
ZFP36L1	7q-Amp	0.823	1
ARID2	RBM26	0.823	1
ARID2	7q-Amp	0.823	1
CPD	Del_22q13.32	0.823	1
DLX6	Amp_8q22.3	0.823	1
EPHA2	Amp_6p22.3	0.823	1
ADC	Del_2q34	0.823	1
FAM47C	20p-Amp	0.823	1
ZNF185	Amp_8q22.3	0.823	1
20q-Amp	16p-Del	0.823	1
11p-Del	Amp_17q12	0.823	1
Amp_3q26.33	Del_2q37.1	0.823	1
Amp_4p16.3	Amp_6p22.3	0.823	1
Amp_19q12	Del_18q23	0.823	1
CDKN2A	ELF3	0.824	1
CDKN2A	Amp_17q23.3	0.824	1
EP300	Amp_22q12.2	0.824	1
FBXW7	Del_2q22.1	0.824	1
METTL3	Del_2q22.1	0.824	1
PSIP1	8q-Amp	0.824	1
RHOA	Amp_8p11.21	0.824	1
RHOB	Amp_17q23.3	0.824	1
ATAD5	Del_2q22.1	0.824	1
DENND5B	Del_18q23	0.824	1
LETMD1	Del_8p21.3	0.824	1
RBM26	Del_18q23	0.824	1
SNRPB	Del_8p21.3	0.824	1
SCARF2	Del_8p21.3	0.824	1
7q-Amp	Del_18q23	0.824	1
11p-Del	Amp_22q12.2	0.824	1
8p-Del	9q-Del	0.824	1
Amp_1q23.3	Del_2q37.1	0.824	1
Amp_8p11.21	Amp_16p13.2	0.824	1
ATM	HORMAD1	0.825	1
ATM	NF2	0.825	1
ATM	STK32B	0.825	1
C3orf70	Amp_19q13.43	0.825	1
C3orf70	Del_8p23.3	0.825	1
ERBB2	Amp_1q21.3	0.825	1
FOXQ1	Del_8p23.3	0.825	1
KDM6A	9p-Del	0.825	1
KRAS	Del_8p23.3	0.825	1
NF2	Del_4q34.2	0.825	1
PSIP1	SPTAN1	0.825	1
PTEN	Del_8p23.3	0.825	1
RUNX1	Del_8p23.3	0.825	1
ACTB	Del_8p23.3	0.825	1
CDKN2AIPNL	Amp_3p25.2	0.825	1
EXOSC10	Del_8p23.3	0.825	1
MED13	Amp_1q21.3	0.825	1
RBM26	SPTAN1	0.825	1
WAC	Del_8p23.3	0.825	1
ZNF626	Del_8p23.3	0.825	1
BAP1	Del_8p23.3	0.825	1
CUL1	Del_8p23.3	0.825	1
EPS8	Del_8p23.3	0.825	1
SPTAN1	Del_22q13.32	0.825	1
ZNF773	Del_4q34.2	0.825	1
20p-Amp	Amp_7p11.2	0.825	1
9q-Del	Del_8p23.3	0.825	1
Amp_6q21	Del_4q34.2	0.825	1
Amp_12q15	Amp_13q22.1	0.825	1
Del_1p36.11	Del_8p23.3	0.825	1
ARID1A	Amp_19q12	0.826	1
EP300	FUT5	0.826	1
EP300	ZNF185	0.826	1
ERBB3	Amp_1p34.2	0.826	1
HIST1H3B	Amp_22q12.2	0.826	1
KDM6A	RPTN	0.826	1
KDM6A	NDC80	0.826	1
KDM6A	19q-Amp	0.826	1
METTL3	3q-Amp	0.826	1
NF1	ZNF511	0.826	1
NF1	NKX2-2	0.826	1
NFE2L2	SF3B1	0.826	1
PIGS	9q-Del	0.826	1
POTEG	Del_5q12.1	0.826	1
PSIP1	RPTN	0.826	1
PSIP1	DDX3X	0.826	1
PSIP1	NAA15	0.826	1
PSIP1	RARG	0.826	1
PSIP1	19q-Amp	0.826	1
PSIP1	Del_7q36.3	0.826	1
RHOA	10q-Del	0.826	1
RPTN	DENND5B	0.826	1
RXRA	SF3B1	0.826	1
RXRA	MYO16	0.826	1
RXRA	16p-Del	0.826	1
RXRA	22q-Del	0.826	1
SARNP	Del_5q12.1	0.826	1
SF3B1	MYO16	0.826	1
SHANK1	10q-Del	0.826	1
SHANK1	6q-Del	0.826	1
STAG2	Del_14q24.1	0.826	1
TP53	Del_2q34	0.826	1
ZNF180	RBM26	0.826	1
ZNF180	15q-Del	0.826	1
ZNF486	Del_5q12.1	0.826	1
DENND5B	NAA15	0.826	1
DENND5B	Amp_4q13.3	0.826	1
NAA15	7q-Amp	0.826	1
NDC80	RBM26	0.826	1
OR10Z1	9q-Del	0.826	1
RARG	RBM26	0.826	1
RARG	15q-Del	0.826	1
RBM26	19q-Amp	0.826	1
RBM26	Amp_4q13.3	0.826	1
RBM26	Del_7q36.3	0.826	1
UGP2	9q-Del	0.826	1
UGP2	Del_5q12.1	0.826	1
OGDH	5p-Amp	0.826	1
TMCO4	Amp_22q12.2	0.826	1
ZNF185	11p-Del	0.826	1
ZNF185	17p-Del	0.826	1
7q-Amp	Del_7q36.3	0.826	1
11q-Del	Amp_22q12.2	0.826	1
Amp_22q12.2	Del_1q32.1	0.826	1
ARID1A	Del_4q22.1	0.827	1
ASXL2	GTF2I	0.827	1
ASXL2	TXNIP	0.827	1
CFHR4	KLF5	0.827	1
CFHR4	PARD3	0.827	1
COPZ2	NFE2L2	0.827	1
COPZ2	RXRA	0.827	1
COPZ2	MYO16	0.827	1
COPZ2	16p-Del	0.827	1
COPZ2	Amp_11q22.2	0.827	1
ERCC2	KLF5	0.827	1
KLF5	MARK2	0.827	1
KLF5	PPARG	0.827	1
KLF5	PPP4R1	0.827	1
KPTN	NFE2L2	0.827	1
KPTN	SF3B1	0.827	1
KPTN	22q-Del	0.827	1
KPTN	Amp_11q22.2	0.827	1
KRAS	5p-Amp	0.827	1
NF1	Del_2q37.1	0.827	1
NFE2L2	PTTG1IP	0.827	1
PROS1	PARD3	0.827	1
PROS1	ARID1B	0.827	1
PROS1	4q-Del	0.827	1
PSIP1	Del_8p23.3	0.827	1
PTTG1IP	16p-Del	0.827	1
PTTG1IP	22q-Del	0.827	1
PTTG1IP	Amp_11q22.2	0.827	1
RUNX1	5p-Amp	0.827	1
TBC1D12	17p-Del	0.827	1
CTCF	7p-Amp	0.827	1
DENND5B	Del_8p23.3	0.827	1
DPYS	4q-Del	0.827	1
GLTP	Amp_13q22.1	0.827	1
GLTP	Del_16q23.1	0.827	1
MARK2	PARD3	0.827	1
MARK2	4q-Del	0.827	1
STK32B	Amp_6p22.3	0.827	1
TXNIP	Amp_17q12	0.827	1
UBA52	Amp_13q22.1	0.827	1
UBA52	Del_6p25.3	0.827	1
USP28	4q-Del	0.827	1
ZBTB47	Del_6p25.3	0.827	1
CDH1	5p-Amp	0.827	1
DNAH6	Amp_17q12	0.827	1
HLA-A	Amp_12q15	0.827	1
HLA-A	Del_16q23.1	0.827	1
UNC93B1	Del_6p25.3	0.827	1
UNC93B1	Del_16q23.1	0.827	1
4p-Del	Amp_7p11.2	0.827	1
4q-Del	Del_Xp11.3	0.827	1
9p-Del	Amp_17q23.3	0.827	1
Amp_5p15.33	Del_4q22.1	0.827	1
Amp_7p21.1	Del_11p15.5	0.827	1
ELF3	EPHA2	0.828	1
ELF3	KDM5A	0.828	1
ERBB2	Del_1q32.1	0.828	1
ERBB2	Del_Xq21.33	0.828	1
FGFR3	14q-Del	0.828	1
HIST1H2AG	Del_2q37.1	0.828	1
HORMAD1	Del_8p23.3	0.828	1
METTL3	CDKN2AIPNL	0.828	1
RHOA	CDKN2AIPNL	0.828	1
RHOB	HSP90AA1	0.828	1
RHOB	ASXL1	0.828	1
SHANK1	CDKN2AIPNL	0.828	1
STAG2	CDK12	0.828	1
STAG2	14q-Del	0.828	1
HFM1	Del_3p14.2	0.828	1
LETMD1	Del_2q37.1	0.828	1
NCOA1	Del_3p14.2	0.828	1
CNOT3	Del_8p23.3	0.828	1
SCARF2	Del_2q37.1	0.828	1
7p-Amp	8p-Del	0.828	1
4p-Del	Amp_8p11.23	0.828	1
Amp_1q23.3	Del_16p13.3	0.828	1
Amp_4p16.3	Amp_17q23.3	0.828	1
Amp_4p16.3	Del_3p14.2	0.828	1
Amp_19q12	Del_1q32.1	0.828	1
Amp_19q12	Del_Xq21.33	0.828	1
BTG2	IDH1	0.829	1
BTG2	PIGS	0.829	1
BTG2	POTEG	0.829	1
BTG2	ZNF486	0.829	1
BTG2	FUS	0.829	1
C12orf43	POTEG	0.829	1
C12orf43	ZNF486	0.829	1
C12orf43	OR10Z1	0.829	1
C12orf43	UGP2	0.829	1
C12orf43	FUS	0.829	1
CTNNB1	ERBB3	0.829	1
ERBB3	NFE2L3	0.829	1
ERBB3	PTEN	0.829	1
ERBB3	CASP8	0.829	1
ERBB3	IKZF2	0.829	1
ERBB3	THRAP3	0.829	1
ERBB3	EPS8	0.829	1
ERBB3	1q-Amp	0.829	1
ERBB3	Del_4q34.2	0.829	1
HIST1H2AG	IDH1	0.829	1
HIST1H2AG	PIGS	0.829	1
HIST1H2AG	POTEG	0.829	1
HIST1H2AG	ZNF486	0.829	1
HIST1H2AG	FUS	0.829	1
HIST1H3B	PLCXD3	0.829	1
HIST1H3B	AGR3	0.829	1
HIST1H3B	RBP2	0.829	1
HIST1H3B	ADC	0.829	1
HORMAD1	14q-Del	0.829	1
HORMAD1	4p-Del	0.829	1
IDH1	NHLRC1	0.829	1
IDH1	IL10RB	0.829	1
IDH1	LETMD1	0.829	1
IDH1	PHLDA3	0.829	1
IDH1	SNRPB	0.829	1
IDH1	TAF11	0.829	1
IDH1	SCARF2	0.829	1
KRAS	PIK3CA	0.829	1
NF1	Amp_1p34.2	0.829	1
NF2	CDK12	0.829	1
NF2	4p-Del	0.829	1
NHLRC1	PIGS	0.829	1
NHLRC1	POTEG	0.829	1
NHLRC1	SARNP	0.829	1
NHLRC1	OR10Z1	0.829	1
NHLRC1	UGP2	0.829	1
PIGS	TGIF2LX	0.829	1
PIGS	IL10RB	0.829	1
PIGS	LETMD1	0.829	1
PIGS	PHLDA3	0.829	1
PIGS	SNRPB	0.829	1
PIGS	TAF11	0.829	1
PIGS	SCARF2	0.829	1
PIGS	19p-Del	0.829	1
PIK3CA	RUNX1	0.829	1
PIK3CA	IKZF2	0.829	1
PIK3CA	THRAP3	0.829	1
PLCXD3	FAT1	0.829	1
PLCXD3	GNA13	0.829	1
PLCXD3	TMCO4	0.829	1
PLCXD3	17q-Amp	0.829	1
PLCXD3	Del_1q32.1	0.829	1
PLCXD3	Del_11q23.3	0.829	1
PLCXD3	Del_Xq21.33	0.829	1
POTEG	CCNE2	0.829	1
POTEG	IL10RB	0.829	1
POTEG	LETMD1	0.829	1
POTEG	PHLDA3	0.829	1
POTEG	SNRPB	0.829	1
POTEG	TAF11	0.829	1
POTEG	SCARF2	0.829	1
POTEG	19p-Del	0.829	1
SARNP	LETMD1	0.829	1
SARNP	PHLDA3	0.829	1
SARNP	TAF11	0.829	1
SARNP	SCARF2	0.829	1
SARNP	19p-Del	0.829	1
TGIF2LX	ZNF486	0.829	1
TGIF2LX	OR10Z1	0.829	1
TGIF2LX	UGP2	0.829	1
TGIF2LX	FUS	0.829	1
ZBTB7B	4p-Del	0.829	1
ZNF486	PHLDA3	0.829	1
ZNF486	SNRPB	0.829	1
ZNF486	TAF11	0.829	1
ZNF486	SCARF2	0.829	1
ZNF486	19p-Del	0.829	1
AGR3	FAT1	0.829	1
AGR3	GNA13	0.829	1
AGR3	TMCO4	0.829	1
AGR3	17q-Amp	0.829	1
AGR3	20q-Amp	0.829	1
AGR3	Del_1q32.1	0.829	1
AGR3	Del_Xq21.33	0.829	1
CCNE2	UGP2	0.829	1
CDK12	STK32B	0.829	1
CDK12	CNOT3	0.829	1
DDX3X	Amp_20q11.21	0.829	1
IL10RB	OR10Z1	0.829	1
IL10RB	UGP2	0.829	1
IL10RB	FUS	0.829	1
LETMD1	OR10Z1	0.829	1
LETMD1	UGP2	0.829	1
OR10Z1	PHLDA3	0.829	1
OR10Z1	SNRPB	0.829	1
OR10Z1	TAF11	0.829	1
OR10Z1	SCARF2	0.829	1
OR10Z1	19p-Del	0.829	1
PARD3	Del_8p23.3	0.829	1
PHLDA3	UGP2	0.829	1
PHLDA3	FUS	0.829	1
RBP2	GNA13	0.829	1
RBP2	17q-Amp	0.829	1
RBP2	Del_1q32.1	0.829	1
SNRPB	FUS	0.829	1
STK32B	4p-Del	0.829	1
TAF11	UGP2	0.829	1
TAF11	FUS	0.829	1
UGP2	SCARF2	0.829	1
ADC	GNA13	0.829	1
ADC	TMCO4	0.829	1
ADC	17q-Amp	0.829	1
ADC	Del_Xq21.33	0.829	1
CNOT3	4p-Del	0.829	1
DAZAP1	GNA13	0.829	1
DAZAP1	17q-Amp	0.829	1
DAZAP1	Del_Xq21.33	0.829	1
FUS	19p-Del	0.829	1
19q-Amp	Amp_20q11.21	0.829	1
7p-Amp	Del_8p23.3	0.829	1
4p-Del	Amp_6q21	0.829	1
Amp_11q13.3	Del_4q34.2	0.829	1
Del_10q23.31	Del_12p13.1	0.829	1
CDKN1A	Amp_12q15	0.83	1
CFHR4	Amp_7p11.2	0.83	1
DIAPH2	Amp_8q22.3	0.83	1
KDM6A	PTTG1IP	0.83	1
NF1	EPHA2	0.83	1
PIGS	TSC1	0.83	1
RXRA	5p-Amp	0.83	1
RXRA	Amp_3p25.2	0.83	1
SF3B1	Amp_3p25.2	0.83	1
TP53	6q-Del	0.83	1
TSC1	ZNF486	0.83	1
TSC1	OR10Z1	0.83	1
TSC1	UGP2	0.83	1
TSC1	FUS	0.83	1
DLX6	8q-Amp	0.83	1
DPYS	SPTAN1	0.83	1
MARK2	Amp_7p11.2	0.83	1
CNOT1	Amp_8q22.3	0.83	1
FUT5	Del_18q23	0.83	1
ZNF185	8q-Amp	0.83	1
ZNF185	Del_18q23	0.83	1
11q-Del	Del_6p25.3	0.83	1
16p-Del	Amp_3p25.2	0.83	1
22q-Del	Amp_3p25.2	0.83	1
5q-Del	Amp_1q21.3	0.83	1
Amp_3p25.2	Amp_11q22.2	0.83	1
C12orf43	Del_4q22.1	0.831	1
C3orf70	RB1	0.831	1
DIAPH2	FOXQ1	0.831	1
DIAPH2	GPR50	0.831	1
DIAPH2	KRAS	0.831	1
DIAPH2	EXOSC10	0.831	1
DIAPH2	THRAP3	0.831	1
DIAPH2	WAC	0.831	1
DIAPH2	ZNF750	0.831	1
DIAPH2	CDH1	0.831	1
DIAPH2	Del_1p36.11	0.831	1
ERCC2	RPTN	0.831	1
ERCC2	DDX3X	0.831	1
FOXA1	RBM10	0.831	1
FOXQ1	CPD	0.831	1
FOXQ1	RBM10	0.831	1
FOXQ1	TRERF1	0.831	1
FOXQ1	CNOT1	0.831	1
GPR50	RBM10	0.831	1
GPR50	CNOT1	0.831	1
GPR50	FAM47C	0.831	1
HIST1H2AG	Del_4q22.1	0.831	1
KRAS	CPD	0.831	1
KRAS	RBM10	0.831	1
KRAS	SF3B3	0.831	1
KRAS	TRERF1	0.831	1
KRAS	CNOT1	0.831	1
METTL3	8p-Del	0.831	1
NFE2L3	RBM10	0.831	1
NFE2L3	TRERF1	0.831	1
NFE2L3	FAM47C	0.831	1
PTEN	SF3B3	0.831	1
PTEN	TRERF1	0.831	1
PTEN	CNOT1	0.831	1
RB1	ZFP36L2	0.831	1
RB1	ZNF626	0.831	1
RUNX1	CPD	0.831	1
CASP8	SF3B3	0.831	1
CASP8	TRERF1	0.831	1
CASP8	FAM47C	0.831	1
CCNE2	Del_4q22.1	0.831	1
CPD	THRAP3	0.831	1
CPD	ZNF750	0.831	1
CPD	BAP1	0.831	1
CPD	EPS8	0.831	1
CPD	1q-Amp	0.831	1
EXOSC10	TRERF1	0.831	1
IKZF2	RBM10	0.831	1
IKZF2	CNOT1	0.831	1
IKZF2	FAM47C	0.831	1
IL10RB	Del_4q22.1	0.831	1
PHLDA3	Del_4q22.1	0.831	1
RBM10	THRAP3	0.831	1
RBM10	WAC	0.831	1
RBM10	CDH1	0.831	1
RBM10	EPS8	0.831	1
SF3B3	CDH1	0.831	1
SNRPB	Del_4q22.1	0.831	1
TAF11	Del_4q22.1	0.831	1
THRAP3	TRERF1	0.831	1
TRERF1	BAP1	0.831	1
TRERF1	CDH1	0.831	1
TRERF1	EPS8	0.831	1
WAC	FAM47C	0.831	1
CDH1	CNOT1	0.831	1
CNOT1	Del_1p36.11	0.831	1
FAM47C	1q-Amp	0.831	1
FAM47C	Del_1p36.11	0.831	1
19p-Del	Del_4q22.1	0.831	1
ASXL2	NFE2L2	0.832	1
ASXL2	16p-Del	0.832	1
CSMD3	FAT1	0.832	1
DIAPH2	CDK12	0.832	1
IDH1	Del_13q14.2	0.832	1
NF1	Del_11q23.3	0.832	1
POTEG	Del_13q14.2	0.832	1
TP53	HFM1	0.832	1
CDK12	CPD	0.832	1
CDK12	SF3B3	0.832	1
CDK12	FAM47C	0.832	1
CDK12	3q-Amp	0.832	1
CDK12	10q-Del	0.832	1
CDK12	6q-Del	0.832	1
CPD	14q-Del	0.832	1
CPD	4p-Del	0.832	1
OR10Z1	Del_13q14.2	0.832	1
TRERF1	14q-Del	0.832	1
CNOT1	14q-Del	0.832	1
16p-Del	Amp_17q12	0.832	1
Amp_3p25.2	Del_18q23	0.832	1
CNNM4	NRAS	0.833	1
CNNM4	GLTP	0.833	1
CNNM4	UBA52	0.833	1
CNNM4	ZBTB47	0.833	1
CNNM4	HLA-A	0.833	1
CNNM4	UNC93B1	0.833	1
CNNM4	Amp_8q22.3	0.833	1
CREBBP	ELF3	0.833	1
CTNNB1	DLX6	0.833	1
CTNNB1	FUT5	0.833	1
CTNNB1	ZNF185	0.833	1
FOXA1	DLX6	0.833	1
FOXA1	FUT5	0.833	1
FOXA1	ZNF185	0.833	1
FOXQ1	DLX6	0.833	1
FOXQ1	FUT5	0.833	1
FOXQ1	ZNF185	0.833	1
GPR50	DLX6	0.833	1
GPR50	FUT5	0.833	1
GPR50	ZNF185	0.833	1
GPS2	NRAS	0.833	1
GPS2	GLTP	0.833	1
GPS2	UBA52	0.833	1
GPS2	ZBTB47	0.833	1
GPS2	HLA-A	0.833	1
GPS2	UNC93B1	0.833	1
HIST1H3B	Del_2q37.1	0.833	1
KRAS	DLX6	0.833	1
KRAS	FUT5	0.833	1
MIPOL1	GLTP	0.833	1
MIPOL1	UBA52	0.833	1
MIPOL1	UNC93B1	0.833	1
MIPOL1	Amp_8q22.3	0.833	1
NF1	17p-Del	0.833	1
NFE2L3	DLX6	0.833	1
NRAS	ZNF511	0.833	1
NRAS	NKX2-2	0.833	1
NRAS	TFG	0.833	1
PTEN	DLX6	0.833	1
PTEN	FUT5	0.833	1
PTEN	ZNF185	0.833	1
SF1	GLTP	0.833	1
SF1	UBA52	0.833	1
SF1	ZBTB47	0.833	1
SF1	HLA-A	0.833	1
SF1	UNC93B1	0.833	1
ZNF511	GLTP	0.833	1
ZNF511	UBA52	0.833	1
ZNF511	HLA-A	0.833	1
ZNF511	UNC93B1	0.833	1
CASP8	DLX6	0.833	1
CPD	Del_9p23	0.833	1
DCDC1	DLX6	0.833	1
DCDC1	FUT5	0.833	1
DCDC1	ZNF185	0.833	1
DLX6	EXOSC10	0.833	1
DLX6	IKZF2	0.833	1
DLX6	THRAP3	0.833	1
DLX6	WAC	0.833	1
DLX6	ZNF750	0.833	1
DLX6	BAP1	0.833	1
DLX6	EPS8	0.833	1
DLX6	1q-Amp	0.833	1
EXOSC10	FUT5	0.833	1
GLTP	TFG	0.833	1
NKX2-2	UBA52	0.833	1
NKX2-2	ZBTB47	0.833	1
NKX2-2	UNC93B1	0.833	1
PSMC6	Amp_20q11.21	0.833	1
SLC9A4	Del_2q34	0.833	1
TFG	ZBTB47	0.833	1
TFG	HLA-A	0.833	1
TFG	UNC93B1	0.833	1
TFG	Amp_8q22.3	0.833	1
THRAP3	FUT5	0.833	1
THRAP3	ZNF185	0.833	1
WAC	ZNF185	0.833	1
ZNF626	Del_2q34	0.833	1
BAP1	FUT5	0.833	1
BAP1	ZNF185	0.833	1
CDH1	FUT5	0.833	1
EPS8	FUT5	0.833	1
EPS8	ZNF185	0.833	1
FUT5	1q-Amp	0.833	1
FUT5	Del_1p36.11	0.833	1
GNA13	Del_2q37.1	0.833	1
ZNF185	1q-Amp	0.833	1
ZNF185	Del_1p36.11	0.833	1
ZNF773	Amp_20q11.21	0.833	1
ARID1A	SPTAN1	0.834	1
CFHR4	Amp_10p14	0.834	1
COPZ2	KLF5	0.834	1
COPZ2	ARID1B	0.834	1
COPZ2	7p-Amp	0.834	1
COPZ2	4q-Del	0.834	1
CSMD3	TFG	0.834	1
ERBB3	CPD	0.834	1
ERBB3	CNOT1	0.834	1
ERBB3	17p-Del	0.834	1
ERCC2	Amp_19q12	0.834	1
KDM6A	8p-Del	0.834	1
KLF5	KPTN	0.834	1
KLF5	PTTG1IP	0.834	1
KPTN	PARD3	0.834	1
KPTN	ARID1B	0.834	1
KPTN	7p-Amp	0.834	1
KPTN	4q-Del	0.834	1
NRAS	20p-Amp	0.834	1
PTTG1IP	PARD3	0.834	1
PTTG1IP	ARID1B	0.834	1
PTTG1IP	7p-Amp	0.834	1
PTTG1IP	4q-Del	0.834	1
SHANK1	Amp_19q12	0.834	1
TBC1D12	TP53	0.834	1
GLTP	20p-Amp	0.834	1
PPARG	Amp_10p14	0.834	1
UBA52	20p-Amp	0.834	1
ZBTB47	20p-Amp	0.834	1
HLA-A	Del_22q13.32	0.834	1
FGFR3	CPD	0.835	1
KDM6A	METTL3	0.835	1
NF1	Del_14q24.1	0.835	1
PKHD1	Amp_6p22.3	0.835	1
RHOB	TSC1	0.835	1
TP53	ZNF511	0.835	1
ZNF511	Del_9p23	0.835	1
AGR3	Amp_8p11.21	0.835	1
NEK11	Amp_3q26.33	0.835	1
PPARGC1A	Amp_3q26.33	0.835	1
RBM10	Amp_8p11.23	0.835	1
RBM10	Del_16p13.3	0.835	1
RBP2	Del_2q22.1	0.835	1
SSH3	Amp_11q13.3	0.835	1
TFG	Del_9p23	0.835	1
TXNIP	Amp_3q26.33	0.835	1
TXNIP	Amp_11q13.3	0.835	1
TXNIP	Del_10q23.31	0.835	1
ADC	Del_2q22.1	0.835	1
CNOT1	Amp_8p11.23	0.835	1
DAZAP1	Del_2q22.1	0.835	1
7q-Amp	Amp_13q22.1	0.835	1
15q-Del	Amp_12q15	0.835	1
15q-Del	Amp_13q22.1	0.835	1
18q-Del	Amp_1q21.3	0.835	1
C3orf70	TSC1	0.836	1
CNNM4	ARID2	0.836	1
CNNM4	Amp_1p34.2	0.836	1
CREBBP	GNA13	0.836	1
CREBBP	Del_1q32.1	0.836	1
ELF3	Amp_3p25.2	0.836	1
HRAS	RIPK4	0.836	1
MIPOL1	ARID2	0.836	1
TBC1D12	Del_1q32.1	0.836	1
TBC1D12	Del_Xq21.33	0.836	1
TSC1	ZFP36L2	0.836	1
TSC1	SLC9A4	0.836	1
TSC1	ZNF626	0.836	1
ZFP36L1	TFG	0.836	1
ZFP36L2	RIPK4	0.836	1
ZFP36L2	SLC9A4	0.836	1
ACTB	RIPK4	0.836	1
ACTB	ZNF626	0.836	1
HSP90AA1	Del_14q24.1	0.836	1
NKX2-2	Amp_1p34.2	0.836	1
RIPK4	ZNF626	0.836	1
RIPK4	CUL1	0.836	1
SLC9A4	ZNF626	0.836	1
TFG	Amp_1p34.2	0.836	1
ZNF626	3p-Amp	0.836	1
ADC	Amp_5p15.33	0.836	1
ASXL1	18q-Del	0.836	1
ASXL1	Del_14q24.1	0.836	1
CUL1	3p-Amp	0.836	1
DAZAP1	Amp_5p15.33	0.836	1
TMCO4	Amp_7p21.1	0.836	1
TMCO4	Del_6q27	0.836	1
17q-Amp	Amp_7p21.1	0.836	1
17q-Amp	Del_6q27	0.836	1
17q-Amp	Del_11q25	0.836	1
Amp_3p25.2	Amp_17q23.3	0.836	1
ATM	8q-Amp	0.837	1
CDKN1A	GTF2I	0.837	1
CDKN1A	NEK11	0.837	1
CDKN1A	PPARGC1A	0.837	1
CDKN1A	SSH3	0.837	1
ERBB2	ATAD5	0.837	1
ERBB2	Amp_16p13.2	0.837	1
GTF2I	METTL3	0.837	1
GTF2I	11q-Del	0.837	1
GTF2I	Del_19p13.3	0.837	1
HIST1H3B	RXRA	0.837	1
HIST1H3B	MYO16	0.837	1
HIST1H3B	16p-Del	0.837	1
HIST1H3B	22q-Del	0.837	1
HRAS	CDKN2AIPNL	0.837	1
METTL3	TXNIP	0.837	1
NFE2L2	GNA13	0.837	1
RHOA	ITGA4	0.837	1
RHOA	NEK11	0.837	1
RHOA	PPARGC1A	0.837	1
RHOA	DNAH6	0.837	1
RXRA	GNA13	0.837	1
RXRA	TMCO4	0.837	1
RXRA	Del_Xq21.33	0.837	1
SF3B1	17q-Amp	0.837	1
SF3B1	Del_1q32.1	0.837	1
SHANK1	NEK11	0.837	1
SHANK1	DNAH6	0.837	1
ACTB	CDKN2AIPNL	0.837	1
CDKN2AIPNL	RIPK4	0.837	1
CDKN2AIPNL	SLC9A4	0.837	1
CDKN2AIPNL	ZNF626	0.837	1
CDKN2AIPNL	CUL1	0.837	1
CDKN2AIPNL	3p-Amp	0.837	1
EXOSC10	Amp_1q23.3	0.837	1
IKZF2	Amp_1q23.3	0.837	1
ITGA4	11q-Del	0.837	1
NEK11	11q-Del	0.837	1
NEK11	5q-Del	0.837	1
SSH3	Del_19p13.3	0.837	1
WAC	Amp_1q23.3	0.837	1
ARID1B	Del_5q12.1	0.837	1
GNA13	16p-Del	0.837	1
GNA13	22q-Del	0.837	1
TMCO4	Amp_11q22.2	0.837	1
17q-Amp	Amp_11q22.2	0.837	1
20q-Amp	Amp_12q15	0.837	1
20q-Amp	Del_16q23.1	0.837	1
8q-Amp	Del_4q34.2	0.837	1
Amp_1p34.2	Del_8p23.3	0.837	1
Amp_1q23.3	Del_1p36.11	0.837	1
Amp_1q23.3	Del_2q22.1	0.837	1
Amp_11q22.2	Del_1q32.1	0.837	1
Amp_11q22.2	Del_Xq21.33	0.837	1
Amp_12q15	Del_11q23.3	0.837	1
Del_6p25.3	Del_11q23.3	0.837	1
ASXL2	BTG2	0.838	1
ASXL2	IL10RB	0.838	1
ASXL2	LETMD1	0.838	1
ASXL2	PHLDA3	0.838	1
ASXL2	TAF11	0.838	1
ATM	HSP90AA1	0.838	1
C12orf43	Del_8p23.3	0.838	1
ERCC2	Del_14q24.1	0.838	1
FBXW7	SHANK1	0.838	1
HIST1H2AG	Amp_17q12	0.838	1
IDH1	3q-Amp	0.838	1
IDH1	10q-Del	0.838	1
IDH1	Del_15q13.1	0.838	1
NRAS	Amp_1q21.3	0.838	1
PIGS	3q-Amp	0.838	1
PIGS	5p-Amp	0.838	1
PIGS	10q-Del	0.838	1
PKHD1	RHOA	0.838	1
RHOA	MED13	0.838	1
SARNP	3q-Amp	0.838	1
SARNP	5p-Amp	0.838	1
SARNP	6q-Del	0.838	1
SARNP	Del_15q13.1	0.838	1
TGIF2LX	Amp_17q12	0.838	1
TSC1	Amp_5p15.33	0.838	1
ZNF486	3q-Amp	0.838	1
ZNF486	10q-Del	0.838	1
ZNF486	Del_15q13.1	0.838	1
IL10RB	Del_8p23.3	0.838	1
SNRPB	Del_8p23.3	0.838	1
STK32B	Amp_1q23.3	0.838	1
TAF11	Del_8p23.3	0.838	1
UGP2	3q-Amp	0.838	1
UGP2	6q-Del	0.838	1
ZBTB47	Amp_1q21.3	0.838	1
FUS	5p-Amp	0.838	1
FUS	10q-Del	0.838	1
FUS	6q-Del	0.838	1
FUS	Del_15q13.1	0.838	1
UNC93B1	Amp_1q21.3	0.838	1
Amp_20q11.21	Del_4q34.2	0.838	1
ARID1A	8p-Del	0.839	1
CDKN2A	ZBTB7B	0.839	1
CDKN2A	CNOT3	0.839	1
CDKN2A	ZNF773	0.839	1
CDKN2A	Amp_6q21	0.839	1
CFHR4	Del_12p13.1	0.839	1
HORMAD1	Del_2q34	0.839	1
METTL3	9q-Del	0.839	1
NF2	RHOB	0.839	1
NF2	Del_2q34	0.839	1
PROS1	Del_6p25.3	0.839	1
PROS1	Del_12p13.1	0.839	1
RHOB	ZBTB7B	0.839	1
RHOB	PSMC6	0.839	1
RHOB	STK32B	0.839	1
RHOB	CNOT3	0.839	1
RHOB	9p-Del	0.839	1
CTCF	Del_16q23.1	0.839	1
DPYS	Del_6p25.3	0.839	1
HSP90AA1	MARK2	0.839	1
HSP90AA1	PPARG	0.839	1
MARK2	ASXL1	0.839	1
MARK2	Amp_12q15	0.839	1
MBD1	Amp_13q22.1	0.839	1
MBD1	Del_6p25.3	0.839	1
PPARG	Del_6p25.3	0.839	1
PPARG	Del_12p13.1	0.839	1
PPP4R1	Amp_12q15	0.839	1
USP28	ASXL1	0.839	1
USP28	Del_12p13.1	0.839	1
4p-Del	Amp_13q22.1	0.839	1
Amp_6q21	Del_2q34	0.839	1
CDKN2A	CSMD3	0.84	1
CSMD3	Amp_4q13.3	0.84	1
ERBB2	PLCXD3	0.84	1
ERBB2	DAZAP1	0.84	1
ERBB3	NRAS	0.84	1
ERBB3	GLTP	0.84	1
ERBB3	ZBTB47	0.84	1
PLCXD3	Amp_19q12	0.84	1
RPTN	HFM1	0.84	1
RPTN	KDM5A	0.84	1
RPTN	Del_4q22.1	0.84	1
ZNF180	KDM5A	0.84	1
ZNF180	NCOA1	0.84	1
ZNF180	Amp_4p16.3	0.84	1
AGR3	Amp_19q12	0.84	1
DDX3X	HFM1	0.84	1
DDX3X	KDM5A	0.84	1
DDX3X	NCOA1	0.84	1
DDX3X	Amp_4p16.3	0.84	1
DENND5B	Amp_1q23.3	0.84	1
EPHA2	RARG	0.84	1
EPHA2	19q-Amp	0.84	1
EPHA2	Amp_4q13.3	0.84	1
HFM1	RARG	0.84	1
KDM5A	RARG	0.84	1
NCOA1	19q-Amp	0.84	1
NCOA1	Amp_4q13.3	0.84	1
RARG	Amp_4p16.3	0.84	1
ADC	Amp_19q12	0.84	1
OGDH	Amp_4q13.3	0.84	1
20p-Amp	Amp_13q22.1	0.84	1
8p-Del	Del_13q14.2	0.84	1
Amp_4p16.3	Amp_4q13.3	0.84	1
Amp_4q13.3	Del_4q22.1	0.84	1
Amp_6p22.3	Del_19p13.3	0.84	1
Amp_12q15	Del_22q13.32	0.84	1
ARID1A	SARNP	0.841	1
CNNM4	FGFR3	0.841	1
CNNM4	STAG2	0.841	1
CNNM4	Del_16p13.3	0.841	1
COPZ2	HSP90AA1	0.841	1
COPZ2	ASXL1	0.841	1
COPZ2	Del_12p13.1	0.841	1
CREBBP	8q-Amp	0.841	1
ERBB3	Amp_7p11.2	0.841	1
FGFR3	SF1	0.841	1
IDH1	Amp_5p15.33	0.841	1
KLF5	SF3B1	0.841	1
KLF5	MYO16	0.841	1
KLF5	22q-Del	0.841	1
KPTN	HSP90AA1	0.841	1
KPTN	ASXL1	0.841	1
KPTN	Del_12p13.1	0.841	1
PTTG1IP	ASXL1	0.841	1
PTTG1IP	Del_12p13.1	0.841	1
RXRA	4q-Del	0.841	1
SARNP	Amp_5p15.33	0.841	1
SF1	Amp_8p11.23	0.841	1
STAG2	ZNF511	0.841	1
TSC1	Del_19p13.3	0.841	1
ZNF511	Amp_8p11.23	0.841	1
CDKN2AIPNL	Del_2q37.1	0.841	1
DPYS	8p-Del	0.841	1
MYO16	7p-Amp	0.841	1
MYO16	4q-Del	0.841	1
SSH3	Del_17p12	0.841	1
TFG	Del_16p13.3	0.841	1
UGP2	Amp_5p15.33	0.841	1
USP28	8p-Del	0.841	1
FUS	Amp_5p15.33	0.841	1
8q-Amp	Del_6q27	0.841	1
6q-Del	Amp_10p14	0.841	1
8p-Del	Amp_19q12	0.841	1
Amp_7p21.1	Del_18q23	0.841	1
ASXL2	FAT1	0.842	1
C3orf70	Del_11q23.3	0.842	1
EP300	FOXA1	0.842	1
EP300	KRAS	0.842	1
EP300	NFE2L3	0.842	1
EP300	Del_1p36.11	0.842	1
FOXA1	17p-Del	0.842	1
GPR50	11p-Del	0.842	1
HORMAD1	PLCXD3	0.842	1
HORMAD1	AGR3	0.842	1
HORMAD1	RBP2	0.842	1
HORMAD1	ADC	0.842	1
HORMAD1	DAZAP1	0.842	1
HRAS	Del_11q23.3	0.842	1
KDM6A	MED13	0.842	1
NF2	RBP2	0.842	1
NF2	ADC	0.842	1
NF2	DAZAP1	0.842	1
PLCXD3	STK32B	0.842	1
RUNX1	11p-Del	0.842	1
ZBTB7B	AGR3	0.842	1
ZBTB7B	RBP2	0.842	1
ZBTB7B	ADC	0.842	1
ZBTB7B	DAZAP1	0.842	1
ZFP36L1	EPHA2	0.842	1
ZFP36L1	HFM1	0.842	1
ZFP36L1	KDM5A	0.842	1
ZFP36L1	NCOA1	0.842	1
ZFP36L1	OGDH	0.842	1
ACTB	20q-Amp	0.842	1
AGR3	PSMC6	0.842	1
AGR3	CNOT3	0.842	1
ARID2	EPHA2	0.842	1
FAT1	RIPK4	0.842	1
FAT1	CUL1	0.842	1
FAT1	Amp_17q12	0.842	1
ITGA4	Del_2q37.1	0.842	1
PARD3	Del_17p12	0.842	1
PSMC6	RBP2	0.842	1
PSMC6	ADC	0.842	1
RBP2	ZNF773	0.842	1
RBP2	Amp_6q21	0.842	1
SLC9A4	20q-Amp	0.842	1
SLC9A4	Del_11q23.3	0.842	1
STK32B	ADC	0.842	1
STK32B	DAZAP1	0.842	1
THRAP3	17p-Del	0.842	1
TXNIP	Del_2q37.1	0.842	1
WAC	17p-Del	0.842	1
ZBTB47	Amp_6p22.3	0.842	1
ZNF626	Del_11q23.3	0.842	1
ZNF750	17p-Del	0.842	1
ADC	CNOT3	0.842	1
ADC	ZNF773	0.842	1
ADC	Amp_6q21	0.842	1
CNOT3	DAZAP1	0.842	1
DAZAP1	ZNF773	0.842	1
DAZAP1	Amp_6q21	0.842	1
HLA-A	Amp_6p22.3	0.842	1
OGDH	Amp_1p34.2	0.842	1
SPTAN1	Amp_20q11.21	0.842	1
SPTAN1	Del_13q14.2	0.842	1
UNC93B1	Amp_6p22.3	0.842	1
11p-Del	Del_1p36.11	0.842	1
Amp_11q13.3	Del_5q12.1	0.842	1
Amp_19q13.43	Del_2q37.1	0.842	1
ASXL2	3q-Amp	0.843	1
ATM	ITGA4	0.843	1
ATM	NEK11	0.843	1
ATM	DNAH6	0.843	1
EP300	OGDH	0.843	1
METTL3	Del_11q25	0.843	1
RHOA	Amp_7p21.1	0.843	1
SHANK1	TBC1D12	0.843	1
SHANK1	Amp_7p21.1	0.843	1
SHANK1	Del_11q25	0.843	1
TP53	Del_6p25.3	0.843	1
3q-Amp	Amp_17q12	0.843	1
6q-Del	Amp_17q12	0.843	1
Amp_17q12	Del_15q13.1	0.843	1
Amp_17q23.3	Del_15q13.1	0.843	1
Amp_22q12.2	Del_12p13.1	0.843	1
CDKN1A	16p-Del	0.844	1
CFHR4	DLX6	0.844	1
CFHR4	FUT5	0.844	1
CFHR4	ZNF185	0.844	1
CTNNB1	RBM26	0.844	1
ELF3	TMCO4	0.844	1
ERBB2	MYO16	0.844	1
ERCC2	Amp_8p11.23	0.844	1
ERCC2	Del_16p13.3	0.844	1
FOXA1	PSIP1	0.844	1
FOXQ1	PSIP1	0.844	1
FOXQ1	DENND5B	0.844	1
FOXQ1	RBM26	0.844	1
GPR50	DENND5B	0.844	1
HIST1H2AG	RB1	0.844	1
HIST1H3B	Amp_17q23.3	0.844	1
KRAS	PSIP1	0.844	1
KRAS	RBM26	0.844	1
KRAS	15q-Del	0.844	1
NFE2L2	5q-Del	0.844	1
NFE2L3	RBM26	0.844	1
NFE2L3	7q-Amp	0.844	1
NHLRC1	RB1	0.844	1
PROS1	DLX6	0.844	1
PROS1	FUT5	0.844	1
PROS1	ZNF185	0.844	1
PSIP1	PTEN	0.844	1
PSIP1	CASP8	0.844	1
PSIP1	IKZF2	0.844	1
PSIP1	WAC	0.844	1
PSIP1	BAP1	0.844	1
PSIP1	EPS8	0.844	1
PTEN	DENND5B	0.844	1
PTEN	RBM26	0.844	1
PTEN	7q-Amp	0.844	1
PTEN	15q-Del	0.844	1
RB1	IL10RB	0.844	1
RB1	LETMD1	0.844	1
RB1	PHLDA3	0.844	1
RB1	19p-Del	0.844	1
RXRA	5q-Del	0.844	1
RXRA	Amp_19q12	0.844	1
SF3B1	Amp_19q12	0.844	1
SF3B1	Del_19p13.3	0.844	1
TGIF2LX	9p-Del	0.844	1
CASP8	7q-Amp	0.844	1
CTCF	DLX6	0.844	1
CTCF	FUT5	0.844	1
CTCF	ZNF185	0.844	1
DCDC1	DENND5B	0.844	1
DCDC1	15q-Del	0.844	1
DENND5B	IKZF2	0.844	1
DLX6	DPYS	0.844	1
DLX6	MARK2	0.844	1
DLX6	MBD1	0.844	1
DLX6	PPARG	0.844	1
DLX6	USP28	0.844	1
DLX6	Del_Xp11.3	0.844	1
DPYS	FUT5	0.844	1
DPYS	ZNF185	0.844	1
EXOSC10	15q-Del	0.844	1
IKZF2	7q-Amp	0.844	1
MARK2	FUT5	0.844	1
MARK2	ZNF185	0.844	1
MBD1	FUT5	0.844	1
MED13	Amp_20q11.21	0.844	1
MYO16	Del_19p13.3	0.844	1
PHLDA3	9p-Del	0.844	1
PPARG	ZNF185	0.844	1
RBM26	ZNF750	0.844	1
RBM26	BAP1	0.844	1
RBM26	1q-Amp	0.844	1
USP28	FUT5	0.844	1
USP28	ZNF185	0.844	1
WAC	15q-Del	0.844	1
ZNF750	7q-Amp	0.844	1
BAP1	7q-Amp	0.844	1
CDH1	7q-Amp	0.844	1
EPS8	15q-Del	0.844	1
GNA13	Del_3p14.2	0.844	1
ZNF185	Del_Xp11.3	0.844	1
1q-Amp	7q-Amp	0.844	1
1q-Amp	15q-Del	0.844	1
3q-Amp	Amp_8q22.3	0.844	1
19p-Del	9p-Del	0.844	1
22q-Del	Amp_19q12	0.844	1
ASXL2	Del_9p23	0.845	1
CDKN2A	DIAPH2	0.845	1
CDKN2A	SF3B3	0.845	1
CDKN2A	FAM47C	0.845	1
CSMD3	FUT5	0.845	1
CSMD3	ZNF185	0.845	1
ELF3	11p-Del	0.845	1
ERBB3	Amp_3p25.2	0.845	1
PSIP1	Del_22q13.32	0.845	1
RHOB	RBM10	0.845	1
RHOB	SF3B3	0.845	1
STAG2	Del_9p23	0.845	1
TP53	RIPK4	0.845	1
TP53	CUL1	0.845	1
ATAD5	Del_4q22.1	0.845	1
HSP90AA1	Del_8p21.3	0.845	1
MED13	Del_4q22.1	0.845	1
20p-Amp	15q-Del	0.845	1
20q-Amp	4q-Del	0.845	1
7q-Amp	Del_22q13.32	0.845	1
8q-Amp	Amp_1q21.3	0.845	1
Amp_3p25.2	Amp_5p15.33	0.845	1
Amp_8p11.23	Del_9p23	0.845	1
Amp_16p13.2	Del_4q22.1	0.845	1
BTG2	CDKN1A	0.846	1
BTG2	5q-Del	0.846	1
BTG2	Amp_1q23.3	0.846	1
BTG2	Del_19p13.3	0.846	1
C12orf43	Del_19p13.3	0.846	1
CDKN1A	CCNE2	0.846	1
CDKN1A	IL10RB	0.846	1
CDKN1A	LETMD1	0.846	1
CDKN1A	SNRPB	0.846	1
CDKN1A	SCARF2	0.846	1
CDKN1A	19p-Del	0.846	1
CREBBP	AGR3	0.846	1
CREBBP	DAZAP1	0.846	1
ERBB3	Del_18q23	0.846	1
FBXW7	SARNP	0.846	1
FBXW7	CDK12	0.846	1
FBXW7	OR10Z1	0.846	1
FBXW7	FUS	0.846	1
FBXW7	14q-Del	0.846	1
FGFR3	10q-Del	0.846	1
GTF2I	CDKN2AIPNL	0.846	1
HORMAD1	Del_11q23.3	0.846	1
NF2	FAT1	0.846	1
NHLRC1	11q-Del	0.846	1
PIGS	PKHD1	0.846	1
PIGS	MED13	0.846	1
PKHD1	POTEG	0.846	1
PKHD1	ZNF486	0.846	1
PLCXD3	TBC1D12	0.846	1
PLCXD3	Del_11q25	0.846	1
POTEG	ATAD5	0.846	1
POTEG	MED13	0.846	1
STAG2	6q-Del	0.846	1
STAG2	Del_11q23.3	0.846	1
TBC1D12	DAZAP1	0.846	1
ZBTB7B	FAT1	0.846	1
ZNF486	Amp_16p13.2	0.846	1
AGR3	Amp_7p21.1	0.846	1
ATAD5	FUS	0.846	1
ATAD5	14q-Del	0.846	1
CDKN2AIPNL	ITGA4	0.846	1
CDKN2AIPNL	NEK11	0.846	1
CDKN2AIPNL	PPARGC1A	0.846	1
CDKN2AIPNL	SSH3	0.846	1
CDKN2AIPNL	TXNIP	0.846	1
CDKN2AIPNL	DNAH6	0.846	1
FAT1	Del_16p13.3	0.846	1
IL10RB	5q-Del	0.846	1
IL10RB	Amp_1q23.3	0.846	1
LETMD1	Del_19p13.3	0.846	1
MED13	OR10Z1	0.846	1
MED13	FUS	0.846	1
PHLDA3	5q-Del	0.846	1
PHLDA3	Amp_1q23.3	0.846	1
PSMC6	Del_11q23.3	0.846	1
RBP2	Amp_7p21.1	0.846	1
RBP2	Del_6q27	0.846	1
SNRPB	11q-Del	0.846	1
SNRPB	5q-Del	0.846	1
TAF11	Amp_1q23.3	0.846	1
ADC	Amp_7p21.1	0.846	1
ADC	Del_11q25	0.846	1
DAZAP1	Del_6q27	0.846	1
20q-Amp	Amp_6q21	0.846	1
3q-Amp	Del_16p13.3	0.846	1
6q-Del	Amp_8p11.23	0.846	1
Amp_3p25.2	Del_11q23.3	0.846	1
Amp_8p11.23	Del_15q13.1	0.846	1
ARID1A	COPZ2	0.847	1
ARID1A	PTTG1IP	0.847	1
BTG2	C12orf43	0.847	1
BTG2	HIST1H2AG	0.847	1
BTG2	NHLRC1	0.847	1
BTG2	TGIF2LX	0.847	1
BTG2	CCNE2	0.847	1
BTG2	IL10RB	0.847	1
BTG2	PHLDA3	0.847	1
BTG2	SNRPB	0.847	1
BTG2	TAF11	0.847	1
BTG2	19p-Del	0.847	1
C12orf43	HIST1H2AG	0.847	1
C12orf43	NHLRC1	0.847	1
C12orf43	TGIF2LX	0.847	1
C12orf43	IL10RB	0.847	1
C12orf43	LETMD1	0.847	1
C12orf43	PHLDA3	0.847	1
C12orf43	SNRPB	0.847	1
C12orf43	TAF11	0.847	1
C12orf43	SCARF2	0.847	1
C12orf43	19p-Del	0.847	1
CDKN2A	SPTAN1	0.847	1
COPZ2	DIAPH2	0.847	1
COPZ2	RBM10	0.847	1
COPZ2	TRERF1	0.847	1
COPZ2	FAM47C	0.847	1
COPZ2	Amp_5p15.33	0.847	1
ERCC2	TBC1D12	0.847	1
ERCC2	Del_12p13.1	0.847	1
FOXQ1	18q-Del	0.847	1
GPR50	Del_14q24.1	0.847	1
HIST1H2AG	NHLRC1	0.847	1
HIST1H2AG	LETMD1	0.847	1
HIST1H2AG	SNRPB	0.847	1
HIST1H2AG	TAF11	0.847	1
HIST1H2AG	SCARF2	0.847	1
HIST1H2AG	19p-Del	0.847	1
HRAS	3q-Amp	0.847	1
KPTN	CPD	0.847	1
KPTN	SF3B3	0.847	1
KPTN	CNOT1	0.847	1
KPTN	FAM47C	0.847	1
METTL3	Del_13q14.2	0.847	1
NHLRC1	TGIF2LX	0.847	1
NHLRC1	CCNE2	0.847	1
NHLRC1	IL10RB	0.847	1
NHLRC1	LETMD1	0.847	1
NHLRC1	PHLDA3	0.847	1
NHLRC1	SNRPB	0.847	1
NHLRC1	TAF11	0.847	1
NHLRC1	19p-Del	0.847	1
PROS1	Del_22q13.32	0.847	1
PTTG1IP	CPD	0.847	1
PTTG1IP	SF3B3	0.847	1
PTTG1IP	CNOT1	0.847	1
PTTG1IP	FAM47C	0.847	1
RB1	Del_5q12.1	0.847	1
TGIF2LX	CCNE2	0.847	1
TGIF2LX	IL10RB	0.847	1
TGIF2LX	LETMD1	0.847	1
TGIF2LX	PHLDA3	0.847	1
TGIF2LX	SNRPB	0.847	1
TGIF2LX	TAF11	0.847	1
TGIF2LX	SCARF2	0.847	1
TGIF2LX	19p-Del	0.847	1
ACTB	6q-Del	0.847	1
CCNE2	LETMD1	0.847	1
CCNE2	SNRPB	0.847	1
CCNE2	SCARF2	0.847	1
CCNE2	19p-Del	0.847	1
DCDC1	18q-Del	0.847	1
DCDC1	Del_14q24.1	0.847	1
DPYS	Del_5q12.1	0.847	1
EPHA2	Del_8p21.3	0.847	1
GLTP	Amp_20q11.21	0.847	1
IKZF2	Del_14q24.1	0.847	1
IL10RB	SNRPB	0.847	1
IL10RB	SCARF2	0.847	1
IL10RB	19p-Del	0.847	1
ITGA4	Amp_19q13.43	0.847	1
LETMD1	PHLDA3	0.847	1
LETMD1	SNRPB	0.847	1
LETMD1	TAF11	0.847	1
LETMD1	SCARF2	0.847	1
LETMD1	19p-Del	0.847	1
MARK2	9q-Del	0.847	1
MARK2	Del_5q12.1	0.847	1
MBD1	20p-Amp	0.847	1
MBD1	Del_22q13.32	0.847	1
NEK11	Amp_19q13.43	0.847	1
PHLDA3	SNRPB	0.847	1
PHLDA3	SCARF2	0.847	1
PHLDA3	19p-Del	0.847	1
PPARG	20p-Amp	0.847	1
PPARG	9q-Del	0.847	1
PPARG	Del_5q12.1	0.847	1
PPP4R1	20p-Amp	0.847	1
PPP4R1	9q-Del	0.847	1
PPP4R1	Del_5q12.1	0.847	1
SLC9A4	3q-Amp	0.847	1
SLC9A4	10q-Del	0.847	1
SNRPB	TAF11	0.847	1
SNRPB	SCARF2	0.847	1
TAF11	SCARF2	0.847	1
TAF11	19p-Del	0.847	1
THRAP3	Del_14q24.1	0.847	1
USP28	20p-Amp	0.847	1
USP28	Del_22q13.32	0.847	1
ZNF626	10q-Del	0.847	1
ASXL1	Amp_1q21.3	0.847	1
BAP1	Del_14q24.1	0.847	1
CDH1	Del_14q24.1	0.847	1
CUL1	Del_15q13.1	0.847	1
DNAH6	Amp_19q13.43	0.847	1
HLA-A	Amp_20q11.21	0.847	1
SCARF2	19p-Del	0.847	1
3p-Amp	6q-Del	0.847	1
Del_8p23.3	Del_13q14.2	0.847	1
CDKN2A	3q-Amp	0.848	1
ELF3	Del_3p14.2	0.848	1
FGFR3	ZNF180	0.848	1
HIST1H3B	PARD3	0.848	1
KLF5	GNA13	0.848	1
NF1	Del_17p12	0.848	1
NFE2L2	17p-Del	0.848	1
PIK3CA	CPD	0.848	1
PIK3CA	TRERF1	0.848	1
PLCXD3	Del_17p12	0.848	1
RB1	CPD	0.848	1
RHOB	10q-Del	0.848	1
RHOB	6q-Del	0.848	1
RHOB	Del_15q13.1	0.848	1
RXRA	11p-Del	0.848	1
SF3B1	17p-Del	0.848	1
STAG2	DDX3X	0.848	1
STAG2	NDC80	0.848	1
CPD	9p-Del	0.848	1
EPHA2	Amp_7p11.2	0.848	1
NCOA1	SPTAN1	0.848	1
PARD3	GNA13	0.848	1
PARD3	17q-Amp	0.848	1
PARD3	Del_Xq21.33	0.848	1
RBM10	9p-Del	0.848	1
SF3B3	9p-Del	0.848	1
TRERF1	9p-Del	0.848	1
ARID1B	GNA13	0.848	1
ARID1B	17q-Amp	0.848	1
DAZAP1	Del_17p12	0.848	1
SPTAN1	Amp_4p16.3	0.848	1
TMCO4	7p-Amp	0.848	1
19q-Amp	Del_16p13.3	0.848	1
8q-Amp	Del_13q14.2	0.848	1
4q-Del	Del_Xq21.33	0.848	1
CREBBP	ATAD5	0.849	1
CREBBP	MED13	0.849	1
EP300	SARNP	0.849	1
EP300	UGP2	0.849	1
FBXW7	Del_11q25	0.849	1
FGFR3	DLX6	0.849	1
FGFR3	FUT5	0.849	1
FOXA1	8q-Amp	0.849	1
FOXQ1	Del_18q23	0.849	1
GPR50	Del_18q23	0.849	1
IDH1	NRAS	0.849	1
IDH1	GLTP	0.849	1
IDH1	UBA52	0.849	1
IDH1	ZBTB47	0.849	1
IDH1	HLA-A	0.849	1
IDH1	UNC93B1	0.849	1
METTL3	NF1	0.849	1
NRAS	PIGS	0.849	1
NRAS	POTEG	0.849	1
NRAS	SARNP	0.849	1
NRAS	ZNF486	0.849	1
NRAS	OR10Z1	0.849	1
NRAS	UGP2	0.849	1
NRAS	FUS	0.849	1
PIGS	GLTP	0.849	1
PIGS	ZBTB47	0.849	1
PIGS	HLA-A	0.849	1
PIGS	UNC93B1	0.849	1
PIGS	11p-Del	0.849	1
PIGS	17p-Del	0.849	1
POTEG	GLTP	0.849	1
POTEG	ZBTB47	0.849	1
POTEG	HLA-A	0.849	1
POTEG	UNC93B1	0.849	1
PSIP1	4p-Del	0.849	1
SARNP	GLTP	0.849	1
SARNP	ZBTB47	0.849	1
STAG2	FUT5	0.849	1
STAG2	Amp_8p11.23	0.849	1
TBC1D12	ATAD5	0.849	1
TSC1	Amp_3q26.33	0.849	1
ZNF180	Amp_3p25.2	0.849	1
ZNF486	GLTP	0.849	1
ZNF486	UBA52	0.849	1
ZNF486	ZBTB47	0.849	1
ZNF486	HLA-A	0.849	1
ATAD5	Amp_7p21.1	0.849	1
CDK12	Amp_3q26.33	0.849	1
DCDC1	8q-Amp	0.849	1
DCDC1	Del_18q23	0.849	1
DLX6	Del_16p13.3	0.849	1
FAT1	Del_2q22.1	0.849	1
GLTP	OR10Z1	0.849	1
GLTP	UGP2	0.849	1
GLTP	FUS	0.849	1
MED13	Amp_7p21.1	0.849	1
NAA15	Amp_3p25.2	0.849	1
OR10Z1	UBA52	0.849	1
OR10Z1	ZBTB47	0.849	1
OR10Z1	HLA-A	0.849	1
OR10Z1	UNC93B1	0.849	1
OR10Z1	17p-Del	0.849	1
RBM26	4p-Del	0.849	1
STK32B	Amp_22q12.2	0.849	1
THRAP3	Del_18q23	0.849	1
UBA52	UGP2	0.849	1
UGP2	UNC93B1	0.849	1
UGP2	11p-Del	0.849	1
ZBTB47	FUS	0.849	1
CNOT3	Amp_22q12.2	0.849	1
FUS	HLA-A	0.849	1
FUT5	Amp_8p11.23	0.849	1
FUT5	Del_16p13.3	0.849	1
1q-Amp	8q-Amp	0.849	1
20q-Amp	Del_2q22.1	0.849	1
7q-Amp	14q-Del	0.849	1
7q-Amp	4p-Del	0.849	1
8q-Amp	Del_1p36.11	0.849	1
14q-Del	Amp_3q26.33	0.849	1
4p-Del	Amp_3q26.33	0.849	1
Amp_3p25.2	Del_7q36.3	0.849	1
Amp_5p15.33	Del_6q27	0.849	1
Amp_8p11.23	Del_16p13.3	0.849	1
Amp_12q15	Del_5q12.1	0.849	1
Amp_16p13.2	Del_6q27	0.849	1
ASXL2	DDX3X	0.85	1
ASXL2	NDC80	0.85	1
C3orf70	Amp_8p11.21	0.85	1
CSMD3	PIK3CA	0.85	1
GTF2I	Del_8p21.3	0.85	1
HORMAD1	Amp_3p25.2	0.85	1
RHOB	STAG2	0.85	1
RHOB	Amp_8p11.23	0.85	1
TSC1	Amp_7p11.2	0.85	1
ZFP36L2	Del_2q22.1	0.85	1
NAA15	Amp_17q12	0.85	1
NEK11	Del_8p21.3	0.85	1
RARG	Amp_17q12	0.85	1
SLC9A4	Amp_8p11.21	0.85	1
SSH3	Del_8p21.3	0.85	1
ZNF626	Amp_8p11.21	0.85	1
ZNF626	Del_2q22.1	0.85	1
FUT5	Del_8p21.3	0.85	1
11q-Del	Amp_20q11.21	0.85	1
ARID1A	HIST1H3B	0.851	1
ARID1A	ZFP36L1	0.851	1
ARID1A	GNA13	0.851	1
ARID1A	Del_1q32.1	0.851	1
ASXL2	KLF5	0.851	1
ASXL2	PARD3	0.851	1
ASXL2	ARID1B	0.851	1
C3orf70	GTF2I	0.851	1
C3orf70	ITGA4	0.851	1
CDKN1A	RB1	0.851	1
CFHR4	DIAPH2	0.851	1
CFHR4	TRERF1	0.851	1
CSMD3	Del_4q22.1	0.851	1
DIAPH2	DPYS	0.851	1
DIAPH2	MBD1	0.851	1
DIAPH2	PPARG	0.851	1
HIST1H3B	Amp_5p15.33	0.851	1
HRAS	TXNIP	0.851	1
PLCXD3	Del_3p14.2	0.851	1
PROS1	CPD	0.851	1
PROS1	RBM10	0.851	1
RB1	GNA13	0.851	1
RB1	TMCO4	0.851	1
ZFP36L2	ITGA4	0.851	1
ACTB	NEK11	0.851	1
ACTB	PPARGC1A	0.851	1
ARID2	Del_2q37.1	0.851	1
CDK12	Del_22q13.32	0.851	1
CPD	USP28	0.851	1
CTCF	RBM10	0.851	1
CTCF	TRERF1	0.851	1
DPYS	SF3B3	0.851	1
ITGA4	3p-Amp	0.851	1
MARK2	FAM47C	0.851	1
MBD1	SF3B3	0.851	1
MBD1	CNOT1	0.851	1
MBD1	FAM47C	0.851	1
NEK11	ZNF626	0.851	1
NEK11	CUL1	0.851	1
PPARG	CNOT1	0.851	1
PPARG	FAM47C	0.851	1
PPARGC1A	RIPK4	0.851	1
PPARGC1A	SLC9A4	0.851	1
PPARGC1A	CUL1	0.851	1
PPARGC1A	3p-Amp	0.851	1
PPP4R1	FAM47C	0.851	1
RBM10	Del_Xp11.3	0.851	1
RBP2	Del_3p14.2	0.851	1
SF3B3	USP28	0.851	1
SLC9A4	DNAH6	0.851	1
SSH3	3p-Amp	0.851	1
TXNIP	CUL1	0.851	1
TXNIP	3p-Amp	0.851	1
USP28	CNOT1	0.851	1
USP28	FAM47C	0.851	1
ZNF626	DNAH6	0.851	1
ARID1B	Amp_17q12	0.851	1
OGDH	Del_18q23	0.851	1
17q-Amp	9p-Del	0.851	1
17q-Amp	Amp_5p15.33	0.851	1
20p-Amp	14q-Del	0.851	1
3q-Amp	8p-Del	0.851	1
8q-Amp	Amp_4p16.3	0.851	1
18q-Del	Amp_3q26.33	0.851	1
4q-Del	Amp_17q12	0.851	1
9p-Del	Del_1q32.1	0.851	1
Amp_4q13.3	Amp_8q22.3	0.851	1
Amp_8p11.21	Del_16q23.1	0.851	1
Amp_12q15	Del_2q22.1	0.851	1
ELF3	METTL3	0.852	1
ELF3	SHANK1	0.852	1
METTL3	Amp_17q23.3	0.852	1
ZFP36L1	FAT1	0.852	1
ARID2	FAT1	0.852	1
ARID2	18q-Del	0.852	1
CDKN2AIPNL	9p-Del	0.852	1
HSP90AA1	Amp_5p15.33	0.852	1
KDM5A	Amp_3p25.2	0.852	1
Amp_1p34.2	Del_14q24.1	0.852	1
ARID1A	ASXL2	0.853	1
BTG2	Amp_19q13.43	0.853	1
CNNM4	Del_10q23.31	0.853	1
ERBB2	Del_5q12.1	0.853	1
GPS2	Del_10q23.31	0.853	1
METTL3	RPTN	0.853	1
RB1	Amp_20q11.21	0.853	1
RHOA	DDX3X	0.853	1
RHOA	NDC80	0.853	1
RHOA	19q-Amp	0.853	1
RHOA	Amp_4q13.3	0.853	1
SF1	Amp_3q26.33	0.853	1
SHANK1	DDX3X	0.853	1
SHANK1	NAA15	0.853	1
SHANK1	NDC80	0.853	1
TGIF2LX	Amp_19q13.43	0.853	1
ZBTB7B	Amp_8p11.21	0.853	1
CPD	Amp_11q13.3	0.853	1
GLTP	18q-Del	0.853	1
IL10RB	Amp_19q13.43	0.853	1
RBM10	Amp_3q26.33	0.853	1
SNRPB	Amp_19q13.43	0.853	1
STK32B	Del_2q22.1	0.853	1
TAF11	Amp_19q13.43	0.853	1
ZBTB47	Del_14q24.1	0.853	1
CNOT1	Del_10q23.31	0.853	1
FAM47C	Del_10q23.31	0.853	1
HLA-A	18q-Del	0.853	1
UNC93B1	Del_14q24.1	0.853	1
ZNF773	Del_2q22.1	0.853	1
Amp_6q21	Amp_8p11.21	0.853	1
CDKN2A	Amp_8q22.3	0.854	1
CNNM4	CDK12	0.854	1
CNNM4	14q-Del	0.854	1
COPZ2	DENND5B	0.854	1
COPZ2	RBM26	0.854	1
COPZ2	7q-Amp	0.854	1
COPZ2	15q-Del	0.854	1
CREBBP	SF3B1	0.854	1
CREBBP	MYO16	0.854	1
KPTN	PSIP1	0.854	1
KPTN	DENND5B	0.854	1
KPTN	RBM26	0.854	1
KPTN	7q-Amp	0.854	1
KPTN	15q-Del	0.854	1
MIPOL1	14q-Del	0.854	1
NF1	OR10Z1	0.854	1
NF1	UGP2	0.854	1
PSIP1	PTTG1IP	0.854	1
PTTG1IP	RBM26	0.854	1
PTTG1IP	7q-Amp	0.854	1
PTTG1IP	15q-Del	0.854	1
RXRA	TBC1D12	0.854	1
RXRA	Del_6q27	0.854	1
RXRA	Del_11q25	0.854	1
ZNF511	CDK12	0.854	1
ZNF511	4p-Del	0.854	1
CTCF	Del_13q14.2	0.854	1
DPYS	Del_13q14.2	0.854	1
EXOSC10	Amp_1q21.3	0.854	1
MYO16	Del_6q27	0.854	1
PPARG	Del_13q14.2	0.854	1
TFG	4p-Del	0.854	1
THRAP3	Amp_1q21.3	0.854	1
WAC	Amp_1q21.3	0.854	1
Amp_1q21.3	Del_1p36.11	0.854	1
Amp_7p21.1	Amp_11q22.2	0.854	1
Del_9p21.3	Del_14q24.1	0.854	1
CSMD3	PKHD1	0.855	1
CSMD3	ATAD5	0.855	1
ERBB2	NF1	0.855	1
ERBB3	PSIP1	0.855	1
ERBB3	PPARG	0.855	1
ERBB3	Del_16q23.1	0.855	1
ERBB3	Del_Xp11.3	0.855	1
ERCC2	FOXA1	0.855	1
ERCC2	FOXQ1	0.855	1
ERCC2	PTEN	0.855	1
ERCC2	WAC	0.855	1
ERCC2	ZNF750	0.855	1
HIST1H3B	DLX6	0.855	1
HIST1H3B	FUT5	0.855	1
HIST1H3B	ZNF185	0.855	1
HORMAD1	Del_11p15.5	0.855	1
IDH1	8q-Amp	0.855	1
IDH1	Del_18q23	0.855	1
PIK3CA	SLC9A4	0.855	1
PIK3CA	CUL1	0.855	1
RHOA	Amp_6p22.3	0.855	1
RPTN	CDKN2AIPNL	0.855	1
RPTN	Del_11p15.5	0.855	1
ZNF180	CDKN2AIPNL	0.855	1
ZNF486	Del_17p12	0.855	1
ZNF486	Del_18q23	0.855	1
CDKN2AIPNL	NAA15	0.855	1
CDKN2AIPNL	19q-Amp	0.855	1
CDKN2AIPNL	Amp_4q13.3	0.855	1
CPD	Del_14q24.1	0.855	1
DDX3X	Del_11p15.5	0.855	1
DLX6	GNA13	0.855	1
DLX6	TMCO4	0.855	1
DLX6	17q-Amp	0.855	1
DLX6	Del_1q32.1	0.855	1
DLX6	Del_Xq21.33	0.855	1
HSP90AA1	Amp_6p22.3	0.855	1
NAA15	Del_11p15.5	0.855	1
NDC80	Del_11p15.5	0.855	1
OR10Z1	Del_17p12	0.855	1
PARD3	Del_2q22.1	0.855	1
UGP2	8q-Amp	0.855	1
FUT5	GNA13	0.855	1
FUT5	TMCO4	0.855	1
FUT5	17q-Amp	0.855	1
FUT5	Del_1q32.1	0.855	1
FUT5	Del_Xq21.33	0.855	1
GNA13	ZNF185	0.855	1
TMCO4	ZNF185	0.855	1
ZNF185	17q-Amp	0.855	1
ZNF185	Del_1q32.1	0.855	1
ZNF185	Del_Xq21.33	0.855	1
Amp_4q13.3	Del_11p15.5	0.855	1
CDKN1A	6q-Del	0.856	1
CNNM4	AGR3	0.856	1
CNNM4	RBP2	0.856	1
CNNM4	ADC	0.856	1
CNNM4	DAZAP1	0.856	1
ERBB3	Del_2q34	0.856	1
ERBB3	Del_19p13.3	0.856	1
ERCC2	Del_2q37.1	0.856	1
GPS2	PLCXD3	0.856	1
GPS2	ADC	0.856	1
GPS2	DAZAP1	0.856	1
MIPOL1	PLCXD3	0.856	1
MIPOL1	AGR3	0.856	1
MIPOL1	RBP2	0.856	1
MIPOL1	ADC	0.856	1
MIPOL1	DAZAP1	0.856	1
PIK3CA	9q-Del	0.856	1
PLCXD3	SF1	0.856	1
PLCXD3	ZNF511	0.856	1
PLCXD3	TFG	0.856	1
PTTG1IP	Del_17p12	0.856	1
RXRA	Amp_19q13.43	0.856	1
SF1	AGR3	0.856	1
SF1	RBP2	0.856	1
SF1	ADC	0.856	1
SF1	DAZAP1	0.856	1
SF3B1	HSP90AA1	0.856	1
ZNF511	AGR3	0.856	1
ZNF511	ADC	0.856	1
ZNF511	DAZAP1	0.856	1
AGR3	NKX2-2	0.856	1
HSP90AA1	MYO16	0.856	1
HSP90AA1	22q-Del	0.856	1
HSP90AA1	Amp_11q22.2	0.856	1
MYO16	ASXL1	0.856	1
NKX2-2	DAZAP1	0.856	1
PARD3	ARID1B	0.856	1
PARD3	7p-Amp	0.856	1
RBP2	TFG	0.856	1
TFG	ADC	0.856	1
TFG	DAZAP1	0.856	1
ASXL1	16p-Del	0.856	1
ASXL1	22q-Del	0.856	1
3q-Amp	Del_19p13.3	0.856	1
7p-Amp	4q-Del	0.856	1
22q-Del	Del_9p23	0.856	1
22q-Del	Del_12p13.1	0.856	1
Amp_3q26.33	Del_13q14.2	0.856	1
C3orf70	ATAD5	0.857	1
CTNNB1	EPHA2	0.857	1
CTNNB1	NCOA1	0.857	1
FBXW7	SLC9A4	0.857	1
FBXW7	ZNF626	0.857	1
FOXA1	EPHA2	0.857	1
FOXQ1	EPHA2	0.857	1
GPR50	NCOA1	0.857	1
GTF2I	TSC1	0.857	1
HRAS	PKHD1	0.857	1
KRAS	HFM1	0.857	1
KRAS	Amp_4p16.3	0.857	1
NFE2L3	HFM1	0.857	1
NFE2L3	KDM5A	0.857	1
PKHD1	SLC9A4	0.857	1
PTEN	OGDH	0.857	1
PTEN	Amp_4p16.3	0.857	1
RUNX1	NCOA1	0.857	1
RUNX1	OGDH	0.857	1
TSC1	ITGA4	0.857	1
TSC1	SSH3	0.857	1
TSC1	DNAH6	0.857	1
ACTB	MED13	0.857	1
ATAD5	ZNF626	0.857	1
DCDC1	EPHA2	0.857	1
DCDC1	HFM1	0.857	1
DCDC1	KDM5A	0.857	1
DPYS	Del_8p21.3	0.857	1
EPHA2	ZNF750	0.857	1
EPHA2	CDH1	0.857	1
EPHA2	EPS8	0.857	1
EPHA2	Amp_13q22.1	0.857	1
EPHA2	Del_1p36.11	0.857	1
EXOSC10	KDM5A	0.857	1
EXOSC10	NCOA1	0.857	1
EXOSC10	OGDH	0.857	1
EXOSC10	Amp_4p16.3	0.857	1
HFM1	THRAP3	0.857	1
HFM1	WAC	0.857	1
HFM1	EPS8	0.857	1
HFM1	Amp_12q15	0.857	1
HFM1	Amp_13q22.1	0.857	1
HFM1	Del_1p36.11	0.857	1
HSP90AA1	Del_2q34	0.857	1
IKZF2	NCOA1	0.857	1
IKZF2	Amp_4p16.3	0.857	1
KDM5A	WAC	0.857	1
KDM5A	ZNF750	0.857	1
KDM5A	CDH1	0.857	1
KDM5A	Amp_12q15	0.857	1
KDM5A	Del_16q23.1	0.857	1
MED13	SLC9A4	0.857	1
MED13	CUL1	0.857	1
MED13	3p-Amp	0.857	1
NCOA1	WAC	0.857	1
NCOA1	CDH1	0.857	1
NCOA1	1q-Amp	0.857	1
THRAP3	OGDH	0.857	1
USP28	Del_9p23	0.857	1
WAC	Amp_4p16.3	0.857	1
ZNF750	OGDH	0.857	1
BAP1	OGDH	0.857	1
BAP1	Amp_4p16.3	0.857	1
CDH1	OGDH	0.857	1
OGDH	1q-Amp	0.857	1
3q-Amp	Del_11p15.5	0.857	1
8q-Amp	16p-Del	0.857	1
Amp_3p25.2	Del_10q23.31	0.857	1
Amp_4p16.3	Del_1p36.11	0.857	1
Amp_6p22.3	Del_6q27	0.857	1
ASXL2	ATAD5	0.858	1
C3orf70	Amp_19q12	0.858	1
CDKN2A	Del_6p25.3	0.858	1
ERBB2	CUL1	0.858	1
RHOB	Del_6p25.3	0.858	1
TBC1D12	8p-Del	0.858	1
TP53	Amp_4q13.3	0.858	1
TP53	Del_7q36.3	0.858	1
DLX6	Amp_3q26.33	0.858	1
DLX6	Amp_11q13.3	0.858	1
SLC9A4	Amp_19q12	0.858	1
CUL1	Amp_19q12	0.858	1
FUT5	Amp_3q26.33	0.858	1
FUT5	Amp_11q13.3	0.858	1
FUT5	Del_10q23.31	0.858	1
ZNF185	Amp_11q13.3	0.858	1
ZNF185	Del_10q23.31	0.858	1
20q-Amp	Del_11p15.5	0.858	1
3p-Amp	Amp_19q12	0.858	1
8p-Del	Amp_7p21.1	0.858	1
Del_4q22.1	Del_12p13.1	0.858	1
ATM	NKX2-2	0.859	1
C12orf43	Amp_10p14	0.859	1
CDKN1A	RARG	0.859	1
CDKN1A	19q-Amp	0.859	1
CTNNB1	Amp_6p22.3	0.859	1
ERCC2	ZBTB47	0.859	1
HIST1H3B	Del_12p13.1	0.859	1
HORMAD1	NFE2L2	0.859	1
HORMAD1	MYO16	0.859	1
HORMAD1	Amp_11q22.2	0.859	1
NF2	NFE2L2	0.859	1
NF2	22q-Del	0.859	1
NFE2L2	ZBTB7B	0.859	1
NFE2L2	ZNF773	0.859	1
RHOB	Del_17p12	0.859	1
RXRA	ZBTB7B	0.859	1
RXRA	CNOT3	0.859	1
SF3B1	ZBTB7B	0.859	1
STAG2	15q-Del	0.859	1
ZBTB7B	MYO16	0.859	1
ZBTB7B	Amp_11q22.2	0.859	1
ZNF180	11q-Del	0.859	1
ZNF511	Del_4q34.2	0.859	1
DDX3X	Del_19p13.3	0.859	1
IKZF2	Amp_6p22.3	0.859	1
MYO16	CNOT3	0.859	1
MYO16	ZNF773	0.859	1
NKX2-2	Del_4q34.2	0.859	1
PHLDA3	Amp_10p14	0.859	1
PSMC6	Amp_11q22.2	0.859	1
RBM26	Amp_8p11.23	0.859	1
SNRPB	Amp_10p14	0.859	1
SSH3	Del_2q34	0.859	1
STK32B	16p-Del	0.859	1
STK32B	22q-Del	0.859	1
TFG	Del_4q34.2	0.859	1
ASXL1	GNA13	0.859	1
ASXL1	TMCO4	0.859	1
ASXL1	Del_1q32.1	0.859	1
ASXL1	Del_Xq21.33	0.859	1
SPTAN1	Del_Xq21.33	0.859	1
TMCO4	Del_12p13.1	0.859	1
ZNF773	Amp_11q22.2	0.859	1
17q-Amp	Amp_7p11.2	0.859	1
15q-Del	Amp_8p11.23	0.859	1
5q-Del	Del_7q36.3	0.859	1
Amp_7p11.2	Del_Xq21.33	0.859	1
Del_11q23.3	Del_19p13.3	0.859	1
Del_12p13.1	Del_Xq21.33	0.859	1
C12orf43	TSC1	0.86	1
CFHR4	5p-Amp	0.86	1
ELF3	ERCC2	0.86	1
ELF3	FBXW7	0.86	1
ELF3	ATAD5	0.86	1
ERBB2	HORMAD1	0.86	1
ERBB2	NF2	0.86	1
ERBB2	PSMC6	0.86	1
ERBB2	CNOT3	0.86	1
HIST1H2AG	TSC1	0.86	1
METTL3	ZFP36L1	0.86	1
METTL3	ARID2	0.86	1
NHLRC1	TSC1	0.86	1
NRAS	Amp_3p25.2	0.86	1
PKHD1	Amp_17q23.3	0.86	1
PKHD1	Del_3p14.2	0.86	1
PROS1	5p-Amp	0.86	1
RHOA	ZFP36L1	0.86	1
SHANK1	Amp_1p34.2	0.86	1
TP53	Amp_11q22.2	0.86	1
TSC1	CCNE2	0.86	1
TSC1	PHLDA3	0.86	1
TSC1	TAF11	0.86	1
TSC1	SCARF2	0.86	1
TSC1	19p-Del	0.86	1
ATAD5	Del_3p14.2	0.86	1
CDK12	Del_5q12.1	0.86	1
CTCF	5p-Amp	0.86	1
MARK2	5p-Amp	0.86	1
MBD1	5p-Amp	0.86	1
MED13	Del_3p14.2	0.86	1
CUL1	8p-Del	0.86	1
FUT5	Del_8p23.3	0.86	1
UNC93B1	Amp_3p25.2	0.86	1
ZNF185	Del_8p23.3	0.86	1
3p-Amp	8p-Del	0.86	1
Del_6p25.3	Del_13q14.2	0.86	1
ATM	SF3B3	0.861	1
CDKN2A	FBXW7	0.861	1
CDKN2A	MED13	0.861	1
COPZ2	EPHA2	0.861	1
COPZ2	HFM1	0.861	1
COPZ2	OGDH	0.861	1
FGFR3	Amp_12q15	0.861	1
KDM6A	14q-Del	0.861	1
KPTN	EPHA2	0.861	1
KPTN	HFM1	0.861	1
KPTN	KDM5A	0.861	1
KPTN	NCOA1	0.861	1
KPTN	OGDH	0.861	1
KPTN	Amp_4p16.3	0.861	1
NRAS	Amp_8q22.3	0.861	1
PSIP1	RHOB	0.861	1
PTTG1IP	EPHA2	0.861	1
PTTG1IP	HFM1	0.861	1
PTTG1IP	KDM5A	0.861	1
PTTG1IP	NCOA1	0.861	1
PTTG1IP	OGDH	0.861	1
PTTG1IP	Amp_4p16.3	0.861	1
RHOB	RBM26	0.861	1
STAG2	Del_6p25.3	0.861	1
STAG2	Del_16q23.1	0.861	1
TGIF2LX	TP53	0.861	1
TP53	IL10RB	0.861	1
TP53	TAF11	0.861	1
GLTP	Amp_8q22.3	0.861	1
TRERF1	Del_4q34.2	0.861	1
Amp_8p11.23	Del_16q23.1	0.861	1
ARID1A	DDX3X	0.862	1
ARID1A	NAA15	0.862	1
CDKN1A	PARD3	0.862	1
CDKN1A	ARID1B	0.862	1
CFHR4	PSIP1	0.862	1
CFHR4	DENND5B	0.862	1
KLF5	5q-Del	0.862	1
METTL3	Amp_20q11.21	0.862	1
PIGS	ZFP36L1	0.862	1
PIGS	Amp_1p34.2	0.862	1
PLCXD3	Amp_7p11.2	0.862	1
POTEG	ZFP36L1	0.862	1
POTEG	ARID2	0.862	1
PROS1	DENND5B	0.862	1
PROS1	15q-Del	0.862	1
PSIP1	DPYS	0.862	1
PSIP1	MBD1	0.862	1
PSIP1	PPARG	0.862	1
PSIP1	PPP4R1	0.862	1
PSIP1	USP28	0.862	1
PSIP1	Del_Xp11.3	0.862	1
RB1	TXNIP	0.862	1
RHOA	Amp_20q11.21	0.862	1
SARNP	ARID2	0.862	1
SARNP	Amp_1p34.2	0.862	1
SHANK1	Amp_20q11.21	0.862	1
STAG2	Del_4q22.1	0.862	1
TBC1D12	SPTAN1	0.862	1
ZFP36L1	ZNF486	0.862	1
ZFP36L1	OR10Z1	0.862	1
ZFP36L1	UGP2	0.862	1
ZFP36L1	FUS	0.862	1
ZFP36L1	Amp_8p11.21	0.862	1
ZNF486	Amp_1p34.2	0.862	1
AGR3	SPTAN1	0.862	1
ARID2	OR10Z1	0.862	1
ARID2	UGP2	0.862	1
ATAD5	Amp_10p14	0.862	1
CTCF	RBM26	0.862	1
CTCF	7q-Amp	0.862	1
DENND5B	MBD1	0.862	1
DENND5B	PPP4R1	0.862	1
DENND5B	Del_Xp11.3	0.862	1
DPYS	RBM26	0.862	1
ITGA4	9p-Del	0.862	1
MARK2	RBM26	0.862	1
OR10Z1	Amp_1p34.2	0.862	1
RBM26	Del_Xp11.3	0.862	1
RBP2	SPTAN1	0.862	1
5p-Amp	8q-Amp	0.862	1
5p-Amp	Amp_8p11.21	0.862	1
5p-Amp	Del_18q23	0.862	1
7p-Amp	5q-Del	0.862	1
5q-Del	Amp_1q23.3	0.862	1
9p-Del	Del_10q23.31	0.862	1
Amp_1p34.2	Del_2q22.1	0.862	1
Amp_8p11.21	Del_16p13.3	0.862	1
Del_2q22.1	Del_8p21.3	0.862	1
Del_5q12.1	Del_12p13.1	0.862	1
ARID1A	Del_11q23.3	0.863	1
ATM	ZNF185	0.863	1
CDKN2A	GPS2	0.863	1
CDKN2A	NKX2-2	0.863	1
CDKN2A	TFG	0.863	1
ERBB2	FAT1	0.863	1
RHOB	SF1	0.863	1
RHOB	NKX2-2	0.863	1
RHOB	TFG	0.863	1
RPTN	Amp_3q26.33	0.863	1
TBC1D12	Del_2q37.1	0.863	1
ZNF180	Amp_11q13.3	0.863	1
CDKN2AIPNL	Amp_10p14	0.863	1
NAA15	Del_10q23.31	0.863	1
NDC80	Amp_11q13.3	0.863	1
NDC80	Del_10q23.31	0.863	1
RARG	Del_10q23.31	0.863	1
ZNF185	Del_4q34.2	0.863	1
19q-Amp	Del_10q23.31	0.863	1
9p-Del	Amp_8p11.21	0.863	1
9p-Del	Del_2q22.1	0.863	1
Amp_10p14	Del_3p14.2	0.863	1
Del_4q22.1	Del_11q25	0.863	1
C12orf43	8p-Del	0.864	1
CTNNB1	CDKN2AIPNL	0.864	1
ERBB2	ARID1B	0.864	1
FOXA1	Del_4q22.1	0.864	1
GPR50	CDKN2AIPNL	0.864	1
GPR50	Del_4q22.1	0.864	1
KRAS	CDKN2AIPNL	0.864	1
KRAS	Del_4q22.1	0.864	1
NFE2L3	CDKN2AIPNL	0.864	1
NFE2L3	Del_4q22.1	0.864	1
NHLRC1	8p-Del	0.864	1
NRAS	Del_11p15.5	0.864	1
PIK3CA	3q-Amp	0.864	1
PIK3CA	6q-Del	0.864	1
PIK3CA	Del_15q13.1	0.864	1
PTEN	CDKN2AIPNL	0.864	1
RB1	Amp_7p11.2	0.864	1
RUNX1	CDKN2AIPNL	0.864	1
RUNX1	Del_4q22.1	0.864	1
TSC1	Del_17p12	0.864	1
CASP8	CDKN2AIPNL	0.864	1
CDKN2AIPNL	DCDC1	0.864	1
CDKN2AIPNL	IKZF2	0.864	1
CDKN2AIPNL	THRAP3	0.864	1
CDKN2AIPNL	WAC	0.864	1
CDKN2AIPNL	ZNF750	0.864	1
CDKN2AIPNL	BAP1	0.864	1
CDKN2AIPNL	CDH1	0.864	1
CDKN2AIPNL	EPS8	0.864	1
CDKN2AIPNL	1q-Amp	0.864	1
EXOSC10	Del_4q22.1	0.864	1
IKZF2	Del_4q22.1	0.864	1
MYO16	Del_3p14.2	0.864	1
THRAP3	Del_4q22.1	0.864	1
WAC	Del_4q22.1	0.864	1
ZNF750	Del_4q22.1	0.864	1
ARID1B	Amp_19q12	0.864	1
10q-Del	Amp_22q12.2	0.864	1
16p-Del	Amp_17q23.3	0.864	1
4p-Del	Amp_3p25.2	0.864	1
4q-Del	Amp_19q12	0.864	1
Amp_7p21.1	Del_2q34	0.864	1
Amp_11q22.2	Amp_17q23.3	0.864	1
Amp_12q15	Del_9p23	0.864	1
Amp_22q12.2	Del_15q13.1	0.864	1
BTG2	NRAS	0.865	1
BTG2	GLTP	0.865	1
BTG2	UBA52	0.865	1
BTG2	ZBTB47	0.865	1
BTG2	UNC93B1	0.865	1
C12orf43	GLTP	0.865	1
C12orf43	UBA52	0.865	1
C12orf43	ZBTB47	0.865	1
C12orf43	UNC93B1	0.865	1
CDKN2A	Amp_10p14	0.865	1
CNNM4	Amp_1q21.3	0.865	1
CTNNB1	Amp_20q11.21	0.865	1
DIAPH2	ERCC2	0.865	1
ERCC2	RBM10	0.865	1
ERCC2	CNOT1	0.865	1
ERCC2	FAM47C	0.865	1
FOXQ1	Amp_20q11.21	0.865	1
GPS2	Amp_1q21.3	0.865	1
HIST1H2AG	NRAS	0.865	1
HIST1H2AG	GLTP	0.865	1
HIST1H2AG	ZBTB47	0.865	1
HIST1H2AG	HLA-A	0.865	1
HIST1H2AG	UNC93B1	0.865	1
NF1	Del_9p21.3	0.865	1
NHLRC1	NRAS	0.865	1
NHLRC1	GLTP	0.865	1
NHLRC1	ZBTB47	0.865	1
NHLRC1	HLA-A	0.865	1
NHLRC1	UNC93B1	0.865	1
NRAS	TGIF2LX	0.865	1
NRAS	CCNE2	0.865	1
NRAS	LETMD1	0.865	1
NRAS	PHLDA3	0.865	1
NRAS	SNRPB	0.865	1
NRAS	TAF11	0.865	1
NRAS	SCARF2	0.865	1
NRAS	19p-Del	0.865	1
RHOB	Amp_10p14	0.865	1
STAG2	ATAD5	0.865	1
TGIF2LX	GLTP	0.865	1
TGIF2LX	HLA-A	0.865	1
ZNF511	Amp_1q21.3	0.865	1
CCNE2	GLTP	0.865	1
CCNE2	UBA52	0.865	1
CCNE2	ZBTB47	0.865	1
CCNE2	HLA-A	0.865	1
CCNE2	UNC93B1	0.865	1
DCDC1	Amp_20q11.21	0.865	1
EPHA2	Del_8p23.3	0.865	1
GLTP	LETMD1	0.865	1
GLTP	SNRPB	0.865	1
GLTP	TAF11	0.865	1
GLTP	SCARF2	0.865	1
GLTP	19p-Del	0.865	1
HFM1	Del_8p23.3	0.865	1
HSP90AA1	Del_8p23.3	0.865	1
IL10RB	UBA52	0.865	1
IL10RB	HLA-A	0.865	1
IL10RB	UNC93B1	0.865	1
LETMD1	UBA52	0.865	1
LETMD1	ZBTB47	0.865	1
LETMD1	HLA-A	0.865	1
MED13	Del_16p13.3	0.865	1
NCOA1	Del_8p23.3	0.865	1
PHLDA3	UBA52	0.865	1
PHLDA3	ZBTB47	0.865	1
PHLDA3	HLA-A	0.865	1
PHLDA3	UNC93B1	0.865	1
SNRPB	UBA52	0.865	1
SNRPB	HLA-A	0.865	1
SNRPB	UNC93B1	0.865	1
TAF11	UBA52	0.865	1
TAF11	HLA-A	0.865	1
TAF11	UNC93B1	0.865	1
THRAP3	Amp_20q11.21	0.865	1
UBA52	19p-Del	0.865	1
ZBTB47	SCARF2	0.865	1
BAP1	Amp_20q11.21	0.865	1
HLA-A	SCARF2	0.865	1
HLA-A	19p-Del	0.865	1
HLA-A	Del_4q22.1	0.865	1
SCARF2	UNC93B1	0.865	1
UNC93B1	19p-Del	0.865	1
Amp_8p11.23	Amp_16p13.2	0.865	1
CREBBP	KDM6A	0.866	1
CREBBP	NF1	0.866	1
CREBBP	NF2	0.866	1
CREBBP	STK32B	0.866	1
CREBBP	ZNF773	0.866	1
CREBBP	Amp_6q21	0.866	1
GTF2I	PPARGC1A	0.866	1
GTF2I	SSH3	0.866	1
GTF2I	TXNIP	0.866	1
GTF2I	DNAH6	0.866	1
HIST1H3B	Del_6p25.3	0.866	1
HORMAD1	TBC1D12	0.866	1
HORMAD1	Del_11q25	0.866	1
NF1	TBC1D12	0.866	1
NF2	TBC1D12	0.866	1
ZBTB7B	Del_6q27	0.866	1
CDK12	EPHA2	0.866	1
CDK12	HFM1	0.866	1
CDK12	OGDH	0.866	1
KDM5A	20p-Amp	0.866	1
NCOA1	14q-Del	0.866	1
PPARGC1A	DNAH6	0.866	1
SSH3	DNAH6	0.866	1
TXNIP	DNAH6	0.866	1
CNOT3	Amp_7p21.1	0.866	1
FUT5	Amp_1q23.3	0.866	1
OGDH	14q-Del	0.866	1
TMCO4	Amp_13q22.1	0.866	1
TMCO4	Del_6p25.3	0.866	1
ZNF773	Amp_7p21.1	0.866	1
17q-Amp	Amp_12q15	0.866	1
17q-Amp	Del_6p25.3	0.866	1
Amp_6q21	Del_6q27	0.866	1
Amp_13q22.1	Del_1q32.1	0.866	1
Amp_17q12	Amp_19q12	0.866	1
Del_17p12	Del_Xq21.33	0.866	1
ASXL2	18q-Del	0.867	1
BTG2	10q-Del	0.867	1
BTG2	6q-Del	0.867	1
C12orf43	10q-Del	0.867	1
C12orf43	Del_15q13.1	0.867	1
C3orf70	DDX3X	0.867	1
C3orf70	NDC80	0.867	1
C3orf70	RARG	0.867	1
C3orf70	19q-Amp	0.867	1
C3orf70	Del_6q27	0.867	1
C3orf70	Del_7q36.3	0.867	1
ERCC2	Del_4q22.1	0.867	1
GTF2I	10q-Del	0.867	1
HIST1H2AG	10q-Del	0.867	1
HORMAD1	DLX6	0.867	1
HORMAD1	FUT5	0.867	1
HRAS	Amp_4q13.3	0.867	1
KDM6A	ZNF773	0.867	1
NF2	DLX6	0.867	1
NF2	FUT5	0.867	1
NF2	ZNF185	0.867	1
NHLRC1	10q-Del	0.867	1
NHLRC1	6q-Del	0.867	1
PLCXD3	Amp_13q22.1	0.867	1
PLCXD3	Del_6p25.3	0.867	1
RPTN	ZFP36L2	0.867	1
RPTN	ACTB	0.867	1
RPTN	ZNF626	0.867	1
TBC1D12	ACTB	0.867	1
TBC1D12	ZNF626	0.867	1
TBC1D12	CUL1	0.867	1
TGIF2LX	10q-Del	0.867	1
TGIF2LX	6q-Del	0.867	1
ZBTB7B	DLX6	0.867	1
ZBTB7B	ZNF185	0.867	1
ZFP36L2	ZNF180	0.867	1
ZFP36L2	DDX3X	0.867	1
ZFP36L2	NAA15	0.867	1
ZFP36L2	19q-Amp	0.867	1
ZFP36L2	Del_7q36.3	0.867	1
ZNF180	ZNF626	0.867	1
ACTB	NAA15	0.867	1
ACTB	NDC80	0.867	1
AGR3	Amp_12q15	0.867	1
AGR3	Amp_13q22.1	0.867	1
DDX3X	RIPK4	0.867	1
DDX3X	ZNF626	0.867	1
DDX3X	CUL1	0.867	1
DLX6	PSMC6	0.867	1
DLX6	STK32B	0.867	1
DLX6	CNOT3	0.867	1
DLX6	ZNF773	0.867	1
FAT1	TXNIP	0.867	1
ITGA4	20q-Amp	0.867	1
ITGA4	3q-Amp	0.867	1
ITGA4	6q-Del	0.867	1
LETMD1	Del_15q13.1	0.867	1
NAA15	ZNF626	0.867	1
NDC80	CUL1	0.867	1
NEK11	20q-Amp	0.867	1
NEK11	3q-Amp	0.867	1
NEK11	6q-Del	0.867	1
PSMC6	FUT5	0.867	1
PSMC6	ZNF185	0.867	1
RARG	SLC9A4	0.867	1
RARG	3p-Amp	0.867	1
RBP2	Del_16q23.1	0.867	1
RIPK4	19q-Amp	0.867	1
RIPK4	Amp_7p21.1	0.867	1
SLC9A4	19q-Amp	0.867	1
SNRPB	10q-Del	0.867	1
STK32B	FUT5	0.867	1
STK32B	ZNF185	0.867	1
TXNIP	6q-Del	0.867	1
ZNF626	Amp_7p21.1	0.867	1
ZNF626	Del_7q36.3	0.867	1
ADC	Amp_13q22.1	0.867	1
ADC	Del_16q23.1	0.867	1
CNOT3	FUT5	0.867	1
CNOT3	ZNF185	0.867	1
CUL1	Del_5q12.1	0.867	1
DAZAP1	Del_16q23.1	0.867	1
DNAH6	10q-Del	0.867	1
DNAH6	Del_11q23.3	0.867	1
FUT5	Amp_6q21	0.867	1
SCARF2	3q-Amp	0.867	1
ZNF185	ZNF773	0.867	1
ZNF185	Amp_6q21	0.867	1
17q-Amp	Amp_8q22.3	0.867	1
19q-Amp	3p-Amp	0.867	1
3p-Amp	Del_7q36.3	0.867	1
3q-Amp	19p-Del	0.867	1
3q-Amp	Amp_11q13.3	0.867	1
19p-Del	Del_15q13.1	0.867	1
6q-Del	Amp_11q13.3	0.867	1
Amp_3q26.33	Del_15q13.1	0.867	1
ASXL2	CSMD3	0.868	1
ASXL2	HSP90AA1	0.868	1
CNNM4	Del_8p21.3	0.868	1
COPZ2	RHOA	0.868	1
COPZ2	SHANK1	0.868	1
ERBB3	20p-Amp	0.868	1
ERBB3	Del_22q13.32	0.868	1
HRAS	NF1	0.868	1
KPTN	RHOA	0.868	1
KPTN	SHANK1	0.868	1
METTL3	PTTG1IP	0.868	1
NF1	SLC9A4	0.868	1
NF1	3p-Amp	0.868	1
NF1	Amp_20q11.21	0.868	1
PIK3CA	PROS1	0.868	1
PTTG1IP	RHOA	0.868	1
PTTG1IP	SHANK1	0.868	1
RHOB	Del_22q13.32	0.868	1
RXRA	TSC1	0.868	1
TP53	Amp_19q12	0.868	1
DDX3X	Amp_19q13.43	0.868	1
NAA15	Amp_19q13.43	0.868	1
NDC80	Amp_19q13.43	0.868	1
20p-Amp	Del_2q37.1	0.868	1
Amp_4q13.3	Amp_19q13.43	0.868	1
Amp_10p14	Del_16p13.3	0.868	1
BTG2	Del_5q12.1	0.869	1
CDKN2A	Amp_3q26.33	0.869	1
CDKN2A	Amp_11q13.3	0.869	1
CSMD3	CTNNB1	0.869	1
CSMD3	FOXQ1	0.869	1
CSMD3	THRAP3	0.869	1
CSMD3	BAP1	0.869	1
CSMD3	EPS8	0.869	1
CSMD3	Del_1p36.11	0.869	1
CTNNB1	METTL3	0.869	1
CTNNB1	RHOA	0.869	1
FOXA1	KDM6A	0.869	1
FOXA1	SHANK1	0.869	1
FOXQ1	METTL3	0.869	1
FOXQ1	RHOA	0.869	1
FOXQ1	SHANK1	0.869	1
GPR50	METTL3	0.869	1
GPR50	RHOA	0.869	1
HORMAD1	7p-Amp	0.869	1
HORMAD1	4q-Del	0.869	1
IDH1	PLCXD3	0.869	1
IDH1	AGR3	0.869	1
IDH1	RBP2	0.869	1
IDH1	ADC	0.869	1
IDH1	DAZAP1	0.869	1
KDM6A	DCDC1	0.869	1
KDM6A	EPS8	0.869	1
KLF5	PSMC6	0.869	1
KLF5	ZNF773	0.869	1
KRAS	METTL3	0.869	1
METTL3	DCDC1	0.869	1
METTL3	IKZF2	0.869	1
METTL3	THRAP3	0.869	1
METTL3	EPS8	0.869	1
METTL3	17p-Del	0.869	1
NF2	PARD3	0.869	1
NF2	ARID1B	0.869	1
NF2	7p-Amp	0.869	1
NF2	4q-Del	0.869	1
NFE2L3	SHANK1	0.869	1
PIGS	PLCXD3	0.869	1
PIGS	AGR3	0.869	1
PIGS	RBP2	0.869	1
PIGS	ADC	0.869	1
PIGS	DAZAP1	0.869	1
PLCXD3	SARNP	0.869	1
PLCXD3	UGP2	0.869	1
POTEG	RBP2	0.869	1
POTEG	ADC	0.869	1
POTEG	DAZAP1	0.869	1
RHOA	THRAP3	0.869	1
RHOB	Amp_3q26.33	0.869	1
RUNX1	SHANK1	0.869	1
SARNP	RBP2	0.869	1
SARNP	ADC	0.869	1
SARNP	DAZAP1	0.869	1
SHANK1	BAP1	0.869	1
SHANK1	11p-Del	0.869	1
TGIF2LX	9q-Del	0.869	1
ZBTB7B	ARID1B	0.869	1
ZBTB7B	7p-Amp	0.869	1
ZNF486	AGR3	0.869	1
ZNF486	RBP2	0.869	1
ZNF486	ADC	0.869	1
ZNF486	DAZAP1	0.869	1
AGR3	FUS	0.869	1
CDK12	Del_13q14.2	0.869	1
IL10RB	Del_5q12.1	0.869	1
OR10Z1	RBP2	0.869	1
OR10Z1	ADC	0.869	1
OR10Z1	DAZAP1	0.869	1
PARD3	PSMC6	0.869	1
PARD3	STK32B	0.869	1
PARD3	CNOT3	0.869	1
PARD3	ZNF773	0.869	1
PHLDA3	9q-Del	0.869	1
PSMC6	ARID1B	0.869	1
RBP2	UGP2	0.869	1
STK32B	ARID1B	0.869	1
UGP2	ADC	0.869	1
UGP2	DAZAP1	0.869	1
ADC	FUS	0.869	1
CNOT3	4q-Del	0.869	1
17q-Amp	Amp_10p14	0.869	1
5p-Amp	Del_10q23.31	0.869	1
7p-Amp	Amp_6q21	0.869	1
14q-Del	Del_13q14.2	0.869	1
15q-Del	Amp_8q22.3	0.869	1
19p-Del	9q-Del	0.869	1
4q-Del	Amp_6q21	0.869	1
Amp_10p14	Del_Xq21.33	0.869	1
ATM	ZNF180	0.87	1
ATM	DDX3X	0.87	1
ATM	NAA15	0.87	1
ATM	NDC80	0.87	1
DIAPH2	GNA13	0.87	1
DIAPH2	TMCO4	0.87	1
HIST1H3B	CPD	0.87	1
HIST1H3B	RBM10	0.87	1
KDM6A	CCNE2	0.87	1
KDM6A	IL10RB	0.87	1
KDM6A	SCARF2	0.87	1
PIK3CA	8q-Amp	0.87	1
PIK3CA	Del_18q23	0.87	1
PLCXD3	Del_9p23	0.87	1
SF1	Amp_6p22.3	0.87	1
AGR3	Del_9p23	0.87	1
CDKN2AIPNL	Del_5q12.1	0.87	1
CPD	GNA13	0.87	1
RBM10	Del_Xq21.33	0.87	1
SF3B3	GNA13	0.87	1
SF3B3	Del_Xq21.33	0.87	1
TFG	Amp_6p22.3	0.87	1
TRERF1	GNA13	0.87	1
TRERF1	17q-Amp	0.87	1
TRERF1	Del_Xq21.33	0.87	1
ARID1B	ASXL1	0.87	1
ASXL1	4q-Del	0.87	1
ASXL1	Del_13q14.2	0.87	1
CNOT1	GNA13	0.87	1
CNOT1	17q-Amp	0.87	1
CNOT1	Del_1q32.1	0.87	1
CNOT1	Del_Xq21.33	0.87	1
DAZAP1	Del_9p23	0.87	1
FAM47C	GNA13	0.87	1
FAM47C	TMCO4	0.87	1
SPTAN1	Amp_3q26.33	0.87	1
SPTAN1	Del_14q24.1	0.87	1
19q-Amp	Del_4q34.2	0.87	1
7p-Amp	Del_12p13.1	0.87	1
Amp_3q26.33	Amp_7p11.2	0.87	1
Amp_7p11.2	Amp_11q13.3	0.87	1
ASXL2	8p-Del	0.871	1
CFHR4	18q-Del	0.871	1
CNNM4	Del_2q34	0.871	1
CSMD3	PIGS	0.871	1
CSMD3	FUS	0.871	1
DIAPH2	NFE2L2	0.871	1
DIAPH2	SF3B1	0.871	1
DIAPH2	22q-Del	0.871	1
NFE2L2	TRERF1	0.871	1
PIK3CA	16p-Del	0.871	1
PIK3CA	22q-Del	0.871	1
RXRA	TRERF1	0.871	1
RXRA	CNOT1	0.871	1
SF1	Del_2q34	0.871	1
SF3B1	SF3B3	0.871	1
CPD	Amp_11q22.2	0.871	1
DPYS	Del_8p23.3	0.871	1
DPYS	Del_14q24.1	0.871	1
FAT1	17p-Del	0.871	1
MED13	8p-Del	0.871	1
MED13	Del_9p23	0.871	1
MYO16	SF3B3	0.871	1
MYO16	TRERF1	0.871	1
MYO16	FAM47C	0.871	1
NKX2-2	Del_2q34	0.871	1
PARD3	17p-Del	0.871	1
PPP4R1	18q-Del	0.871	1
PPP4R1	Del_14q24.1	0.871	1
RBM10	22q-Del	0.871	1
RBM10	Amp_10p14	0.871	1
SF3B3	Amp_11q22.2	0.871	1
TRERF1	16p-Del	0.871	1
TRERF1	Amp_10p14	0.871	1
USP28	Del_8p23.3	0.871	1
USP28	Del_14q24.1	0.871	1
CNOT1	22q-Del	0.871	1
FAM47C	Amp_10p14	0.871	1
18q-Del	Del_Xp11.3	0.871	1
ARID1A	RHOA	0.872	1
ASXL2	NFE2L3	0.872	1
ASXL2	NRAS	0.872	1
ASXL2	UBA52	0.872	1
ASXL2	ZBTB47	0.872	1
ASXL2	EPS8	0.872	1
ASXL2	HLA-A	0.872	1
ASXL2	UNC93B1	0.872	1
ASXL2	1q-Amp	0.872	1
CNNM4	Amp_22q12.2	0.872	1
COPZ2	Del_9p23	0.872	1
ERBB2	ARID2	0.872	1
ERBB3	8p-Del	0.872	1
FOXA1	Amp_17q12	0.872	1
GPS2	Amp_22q12.2	0.872	1
KPTN	Del_9p23	0.872	1
NFE2L3	Amp_17q12	0.872	1
NRAS	Amp_17q12	0.872	1
ZFP36L1	CDK12	0.872	1
ZNF511	Amp_22q12.2	0.872	1
ARID2	14q-Del	0.872	1
HSP90AA1	Del_17p12	0.872	1
TFG	Amp_22q12.2	0.872	1
THRAP3	Amp_17q12	0.872	1
WAC	Amp_17q12	0.872	1
ZBTB47	Amp_17q12	0.872	1
ZNF750	Amp_17q12	0.872	1
CDH1	Amp_17q12	0.872	1
HLA-A	Amp_17q12	0.872	1
UNC93B1	Amp_17q12	0.872	1
ZNF185	Del_2q34	0.872	1
1q-Amp	Amp_17q12	0.872	1
14q-Del	Amp_1p34.2	0.872	1
Amp_1p34.2	Amp_19q12	0.872	1
CFHR4	CDKN2AIPNL	0.873	1
CREBBP	7p-Amp	0.873	1
CSMD3	KDM6A	0.873	1
ELF3	PSMC6	0.873	1
ELF3	ZNF773	0.873	1
EP300	PROS1	0.873	1
EP300	DPYS	0.873	1
HORMAD1	Amp_17q23.3	0.873	1
HORMAD1	Del_3p14.2	0.873	1
KLF5	Del_6q27	0.873	1
PROS1	CDKN2AIPNL	0.873	1
AGR3	20p-Amp	0.873	1
AGR3	Del_22q13.32	0.873	1
CDKN2AIPNL	CTCF	0.873	1
CDKN2AIPNL	MARK2	0.873	1
CDKN2AIPNL	PPARG	0.873	1
CDKN2AIPNL	PPP4R1	0.873	1
CDKN2AIPNL	USP28	0.873	1
CDKN2AIPNL	Del_Xp11.3	0.873	1
CTCF	17p-Del	0.873	1
DENND5B	Amp_22q12.2	0.873	1
DPYS	11p-Del	0.873	1
DPYS	17p-Del	0.873	1
MBD1	11p-Del	0.873	1
MBD1	17p-Del	0.873	1
PARD3	Amp_7p21.1	0.873	1
PARD3	Del_6q27	0.873	1
PPARG	11p-Del	0.873	1
PPARG	17p-Del	0.873	1
PPP4R1	17p-Del	0.873	1
PSMC6	Amp_17q23.3	0.873	1
STK32B	Amp_17q23.3	0.873	1
ADC	Del_22q13.32	0.873	1
ARID1B	Amp_19q13.43	0.873	1
DAZAP1	20p-Amp	0.873	1
GNA13	Del_22q13.32	0.873	1
TMCO4	20p-Amp	0.873	1
ZNF773	Amp_17q23.3	0.873	1
20p-Amp	Del_1q32.1	0.873	1
15q-Del	Amp_22q12.2	0.873	1
4q-Del	Amp_7p21.1	0.873	1
4q-Del	Del_11q25	0.873	1
Del_22q13.32	Del_Xq21.33	0.873	1
C12orf43	ATAD5	0.874	1
C12orf43	MED13	0.874	1
C3orf70	ELF3	0.874	1
C3orf70	Del_13q14.2	0.874	1
CFHR4	HFM1	0.874	1
CFHR4	NCOA1	0.874	1
CFHR4	OGDH	0.874	1
CSMD3	KDM5A	0.874	1
ELF3	SLC9A4	0.874	1
ELF3	Del_4q22.1	0.874	1
FBXW7	IL10RB	0.874	1
FBXW7	LETMD1	0.874	1
FBXW7	SNRPB	0.874	1
FBXW7	TAF11	0.874	1
FBXW7	SCARF2	0.874	1
NHLRC1	PKHD1	0.874	1
NHLRC1	ATAD5	0.874	1
NHLRC1	Amp_16p13.2	0.874	1
NHLRC1	Del_13q14.2	0.874	1
PKHD1	CCNE2	0.874	1
PKHD1	IL10RB	0.874	1
PKHD1	LETMD1	0.874	1
PKHD1	PHLDA3	0.874	1
PKHD1	SCARF2	0.874	1
PKHD1	19p-Del	0.874	1
PROS1	KDM5A	0.874	1
PROS1	NCOA1	0.874	1
RB1	RBM26	0.874	1
TGIF2LX	Amp_16p13.2	0.874	1
TGIF2LX	Del_13q14.2	0.874	1
ZFP36L2	Del_3p14.2	0.874	1
ATAD5	CCNE2	0.874	1
ATAD5	LETMD1	0.874	1
ATAD5	SNRPB	0.874	1
ATAD5	19p-Del	0.874	1
CDKN2AIPNL	Del_13q14.2	0.874	1
CTCF	HFM1	0.874	1
CTCF	KDM5A	0.874	1
CTCF	Amp_4p16.3	0.874	1
DPYS	HFM1	0.874	1
DPYS	KDM5A	0.874	1
EPHA2	MARK2	0.874	1
EPHA2	PPARG	0.874	1
EPHA2	Del_Xp11.3	0.874	1
HFM1	MBD1	0.874	1
IL10RB	MED13	0.874	1
IL10RB	Del_13q14.2	0.874	1
KDM5A	MBD1	0.874	1
KDM5A	PPARG	0.874	1
KDM5A	PPP4R1	0.874	1
LETMD1	MED13	0.874	1
MARK2	NCOA1	0.874	1
MARK2	OGDH	0.874	1
MED13	TAF11	0.874	1
NCOA1	PPARG	0.874	1
NCOA1	PPP4R1	0.874	1
NCOA1	USP28	0.874	1
NDC80	Del_2q37.1	0.874	1
PHLDA3	Amp_16p13.2	0.874	1
PPARG	Amp_4p16.3	0.874	1
PPARGC1A	Del_2q22.1	0.874	1
PPP4R1	OGDH	0.874	1
RARG	Del_2q37.1	0.874	1
RBM26	18q-Del	0.874	1
TXNIP	Amp_8p11.21	0.874	1
USP28	OGDH	0.874	1
ZNF626	Amp_17q23.3	0.874	1
CUL1	Del_3p14.2	0.874	1
OGDH	Del_Xp11.3	0.874	1
SPTAN1	Amp_3p25.2	0.874	1
7q-Amp	18q-Del	0.874	1
15q-Del	9p-Del	0.874	1
19p-Del	Amp_16p13.2	0.874	1
Amp_4q13.3	Del_2q37.1	0.874	1
C3orf70	KPTN	0.875	1
C3orf70	PTTG1IP	0.875	1
COPZ2	HRAS	0.875	1
COPZ2	ZFP36L2	0.875	1
COPZ2	SLC9A4	0.875	1
COPZ2	3p-Amp	0.875	1
ERBB3	HFM1	0.875	1
HRAS	KPTN	0.875	1
HRAS	PTTG1IP	0.875	1
KPTN	RIPK4	0.875	1
KPTN	SLC9A4	0.875	1
KPTN	ZNF626	0.875	1
KPTN	CUL1	0.875	1
PSIP1	Del_10q23.31	0.875	1
PTTG1IP	ZFP36L2	0.875	1
PTTG1IP	ACTB	0.875	1
PTTG1IP	RIPK4	0.875	1
PTTG1IP	SLC9A4	0.875	1
PTTG1IP	ZNF626	0.875	1
PTTG1IP	CUL1	0.875	1
PTTG1IP	3p-Amp	0.875	1
TP53	CTCF	0.875	1
TP53	MARK2	0.875	1
TP53	MBD1	0.875	1
TP53	PPP4R1	0.875	1
CPD	Amp_1q21.3	0.875	1
RBM26	Amp_11q13.3	0.875	1
TRERF1	Amp_1q21.3	0.875	1
CNOT1	Amp_1q21.3	0.875	1
FAM47C	Del_4q22.1	0.875	1
7q-Amp	Amp_3q26.33	0.875	1
15q-Del	Amp_3q26.33	0.875	1
15q-Del	Amp_11q13.3	0.875	1
Amp_8p11.21	Del_12p13.1	0.875	1
Amp_19q13.43	Del_11q23.3	0.875	1
CREBBP	FAT1	0.876	1
CTNNB1	STAG2	0.876	1
FBXW7	GTF2I	0.876	1
FBXW7	NEK11	0.876	1
FBXW7	PPARGC1A	0.876	1
FBXW7	TXNIP	0.876	1
FBXW7	Amp_22q12.2	0.876	1
FGFR3	FOXA1	0.876	1
FGFR3	PIGS	0.876	1
FGFR3	ZNF486	0.876	1
FGFR3	IKZF2	0.876	1
FGFR3	CDH1	0.876	1
FGFR3	20p-Amp	0.876	1
FGFR3	Del_1p36.11	0.876	1
FOXA1	Amp_8p11.23	0.876	1
FOXQ1	Amp_8p11.23	0.876	1
GTF2I	ATAD5	0.876	1
KRAS	Del_16p13.3	0.876	1
METTL3	8q-Amp	0.876	1
NFE2L3	Amp_8p11.23	0.876	1
PIGS	Amp_8p11.23	0.876	1
PIGS	Del_16p13.3	0.876	1
PKHD1	DNAH6	0.876	1
PKHD1	Amp_22q12.2	0.876	1
POTEG	STAG2	0.876	1
PTEN	Del_16p13.3	0.876	1
RUNX1	STAG2	0.876	1
SHANK1	8q-Amp	0.876	1
SHANK1	Del_18q23	0.876	1
STAG2	UGP2	0.876	1
TBC1D12	Del_16q23.1	0.876	1
TP53	MED13	0.876	1
ATAD5	ITGA4	0.876	1
CDK12	Del_8p21.3	0.876	1
DLX6	20q-Amp	0.876	1
EXOSC10	Del_16p13.3	0.876	1
FAT1	ZNF185	0.876	1
IKZF2	Amp_8p11.23	0.876	1
ITGA4	MED13	0.876	1
ITGA4	Amp_16p13.2	0.876	1
MED13	TXNIP	0.876	1
OR10Z1	Amp_8p11.23	0.876	1
PPARG	Del_9p21.3	0.876	1
PPARGC1A	Amp_16p13.2	0.876	1
SSH3	Del_9p23	0.876	1
UGP2	Amp_8p11.23	0.876	1
WAC	Amp_8p11.23	0.876	1
WAC	Del_16p13.3	0.876	1
DNAH6	Amp_16p13.2	0.876	1
ZNF185	20q-Amp	0.876	1
ZNF185	Del_11q23.3	0.876	1
20q-Amp	Del_11q25	0.876	1
5p-Amp	Amp_8q22.3	0.876	1
Amp_7p21.1	Amp_12q15	0.876	1
Amp_8p11.23	Del_10q23.31	0.876	1
Amp_12q15	Del_11q25	0.876	1
Amp_13q22.1	Del_6q27	0.876	1
Del_9p21.3	Del_Xp11.3	0.876	1
ATM	3q-Amp	0.877	1
ATM	Del_15q13.1	0.877	1
CNNM4	Del_11q23.3	0.877	1
COPZ2	PIK3CA	0.877	1
EP300	Amp_7p11.2	0.877	1
GPS2	Del_11q23.3	0.877	1
KDM6A	DENND5B	0.877	1
KDM6A	7q-Amp	0.877	1
KDM6A	15q-Del	0.877	1
PIK3CA	PLCXD3	0.877	1
PIK3CA	ADC	0.877	1
RB1	ZFP36L1	0.877	1
RHOB	EPHA2	0.877	1
RHOB	KDM5A	0.877	1
RHOB	NCOA1	0.877	1
RHOB	Amp_4p16.3	0.877	1
RPTN	TSC1	0.877	1
SF1	Del_11q23.3	0.877	1
TSC1	NAA15	0.877	1
TSC1	NDC80	0.877	1
ZNF511	FAT1	0.877	1
NKX2-2	20q-Amp	0.877	1
PPARGC1A	Amp_1q23.3	0.877	1
TFG	Del_11q23.3	0.877	1
UBA52	Del_2q37.1	0.877	1
SPTAN1	Amp_1q23.3	0.877	1
19q-Amp	Del_17p12	0.877	1
3q-Amp	Amp_12q15	0.877	1
Amp_4q13.3	Del_17p12	0.877	1
Amp_5p15.33	Del_17p12	0.877	1
Amp_11q22.2	Del_8p21.3	0.877	1
C3orf70	Amp_1p34.2	0.878	1
CDKN1A	NRAS	0.878	1
CDKN1A	GLTP	0.878	1
CDKN1A	ZBTB47	0.878	1
CNNM4	DLX6	0.878	1
CNNM4	FUT5	0.878	1
CNNM4	ZNF185	0.878	1
DIAPH2	8p-Del	0.878	1
DIAPH2	Del_2q34	0.878	1
ERBB3	PLCXD3	0.878	1
ERBB3	RHOB	0.878	1
ERBB3	DAZAP1	0.878	1
ERCC2	MARK2	0.878	1
GPS2	DLX6	0.878	1
GPS2	ZNF185	0.878	1
HIST1H2AG	5p-Amp	0.878	1
HORMAD1	ASXL1	0.878	1
HRAS	ZFP36L1	0.878	1
HRAS	ARID2	0.878	1
METTL3	Amp_12q15	0.878	1
MIPOL1	DLX6	0.878	1
MIPOL1	ZNF185	0.878	1
NF2	HSP90AA1	0.878	1
PIGS	CDK12	0.878	1
PIGS	4p-Del	0.878	1
PIGS	Del_9p21.3	0.878	1
POTEG	CDK12	0.878	1
POTEG	14q-Del	0.878	1
POTEG	4p-Del	0.878	1
PTTG1IP	TP53	0.878	1
RHOA	Amp_12q15	0.878	1
RHOA	Del_16q23.1	0.878	1
RPTN	Del_9p21.3	0.878	1
SARNP	14q-Del	0.878	1
SF1	DLX6	0.878	1
SF1	FUT5	0.878	1
SF1	ZNF185	0.878	1
TGIF2LX	5p-Amp	0.878	1
ZBTB7B	HSP90AA1	0.878	1
ZBTB7B	ASXL1	0.878	1
ZFP36L1	ACTB	0.878	1
ZFP36L2	Amp_1p34.2	0.878	1
ZNF486	CDK12	0.878	1
ZNF486	14q-Del	0.878	1
ZNF511	DLX6	0.878	1
ZNF511	FUT5	0.878	1
ZNF511	ZNF185	0.878	1
ACTB	Amp_1p34.2	0.878	1
ARID2	RIPK4	0.878	1
ARID2	SLC9A4	0.878	1
ARID2	ZNF626	0.878	1
ARID2	3p-Amp	0.878	1
CPD	8p-Del	0.878	1
DLX6	NKX2-2	0.878	1
DLX6	TFG	0.878	1
HSP90AA1	PSMC6	0.878	1
HSP90AA1	ZNF773	0.878	1
HSP90AA1	Del_19p13.3	0.878	1
NKX2-2	FUT5	0.878	1
NKX2-2	ZNF185	0.878	1
OR10Z1	4p-Del	0.878	1
PSMC6	ASXL1	0.878	1
RBM10	8p-Del	0.878	1
RIPK4	Amp_1p34.2	0.878	1
SLC9A4	Amp_1p34.2	0.878	1
SNRPB	5p-Amp	0.878	1
STK32B	ASXL1	0.878	1
STK32B	Del_12p13.1	0.878	1
TFG	FUT5	0.878	1
TFG	ZNF185	0.878	1
UBA52	5q-Del	0.878	1
UGP2	14q-Del	0.878	1
UGP2	4p-Del	0.878	1
ZBTB47	11q-Del	0.878	1
ZBTB47	5q-Del	0.878	1
ASXL1	Amp_6q21	0.878	1
CNOT3	Del_12p13.1	0.878	1
FUS	14q-Del	0.878	1
FUS	4p-Del	0.878	1
HLA-A	11q-Del	0.878	1
HLA-A	5q-Del	0.878	1
SCARF2	5p-Amp	0.878	1
UNC93B1	11q-Del	0.878	1
20p-Amp	Amp_19q12	0.878	1
Amp_8q22.3	Del_10q23.31	0.878	1
Del_12p13.1	Del_19p13.3	0.878	1
CFHR4	8q-Amp	0.879	1
KDM6A	Del_16q23.1	0.879	1
NFE2L2	10q-Del	0.879	1
PROS1	8q-Amp	0.879	1
PSIP1	TP53	0.879	1
RXRA	3q-Amp	0.879	1
RXRA	6q-Del	0.879	1
RXRA	Del_15q13.1	0.879	1
SF3B1	3q-Amp	0.879	1
SF3B1	10q-Del	0.879	1
TP53	RBM26	0.879	1
CTCF	8q-Amp	0.879	1
CTCF	Del_18q23	0.879	1
DPYS	8q-Amp	0.879	1
MARK2	8q-Amp	0.879	1
PPARG	Del_18q23	0.879	1
PPP4R1	Del_18q23	0.879	1
20p-Amp	Amp_5p15.33	0.879	1
3q-Amp	Amp_11q22.2	0.879	1
7p-Amp	Del_18q23	0.879	1
Amp_7p21.1	Del_17p12	0.879	1
Amp_16p13.2	Del_11p15.5	0.879	1
C3orf70	Amp_8q22.3	0.88	1
CDKN1A	PTEN	0.88	1
CDKN1A	1q-Amp	0.88	1
ERBB3	Del_1q32.1	0.88	1
ERBB3	Del_2q22.1	0.88	1
ERBB3	Del_Xq21.33	0.88	1
FOXA1	5q-Del	0.88	1
GPS2	MYO16	0.88	1
GTF2I	RPTN	0.88	1
GTF2I	DDX3X	0.88	1
GTF2I	NAA15	0.88	1
GTF2I	Amp_4q13.3	0.88	1
HIST1H3B	PSIP1	0.88	1
HIST1H3B	RBM26	0.88	1
HIST1H3B	9q-Del	0.88	1
MIPOL1	RXRA	0.88	1
MIPOL1	SF3B1	0.88	1
NFE2L3	Del_19p13.3	0.88	1
PSIP1	GNA13	0.88	1
PSIP1	17q-Amp	0.88	1
PSIP1	Del_Xq21.33	0.88	1
RPTN	ITGA4	0.88	1
RPTN	NEK11	0.88	1
RPTN	PPARGC1A	0.88	1
RPTN	DNAH6	0.88	1
RUNX1	11q-Del	0.88	1
RUNX1	5q-Del	0.88	1
RUNX1	Del_19p13.3	0.88	1
RXRA	ZNF511	0.88	1
SF3B1	TFG	0.88	1
TSC1	17p-Del	0.88	1
ZNF180	NEK11	0.88	1
ZNF180	SSH3	0.88	1
ZNF511	MYO16	0.88	1
ATAD5	Del_5q12.1	0.88	1
CTCF	Amp_1q23.3	0.88	1
DDX3X	PPARGC1A	0.88	1
DENND5B	Del_Xq21.33	0.88	1
DLX6	Amp_8p11.21	0.88	1
EXOSC10	Del_19p13.3	0.88	1
ITGA4	Amp_4q13.3	0.88	1
MARK2	Amp_1q23.3	0.88	1
MYO16	NKX2-2	0.88	1
NAA15	NEK11	0.88	1
NAA15	PPARGC1A	0.88	1
NDC80	NEK11	0.88	1
NDC80	PPARGC1A	0.88	1
NEK11	19q-Amp	0.88	1
NEK11	Amp_4q13.3	0.88	1
NKX2-2	22q-Del	0.88	1
NKX2-2	Amp_11q22.2	0.88	1
NKX2-2	Del_8p23.3	0.88	1
RBM26	17q-Amp	0.88	1
RBM26	Del_Xq21.33	0.88	1
SSH3	Del_7q36.3	0.88	1
TFG	22q-Del	0.88	1
TXNIP	Amp_4q13.3	0.88	1
TXNIP	Del_7q36.3	0.88	1
ZNF626	Amp_8q22.3	0.88	1
DNAH6	19q-Amp	0.88	1
GNA13	15q-Del	0.88	1
TMCO4	7q-Amp	0.88	1
17q-Amp	7q-Amp	0.88	1
17q-Amp	15q-Del	0.88	1
17q-Amp	9q-Del	0.88	1
5p-Amp	Amp_6p22.3	0.88	1
7q-Amp	Del_1q32.1	0.88	1
11q-Del	Del_1p36.11	0.88	1
5q-Del	Del_1p36.11	0.88	1
9q-Del	Del_1q32.1	0.88	1
Del_1p36.11	Del_19p13.3	0.88	1
ASXL2	Del_5q12.1	0.881	1
BTG2	NF1	0.881	1
C12orf43	NF1	0.881	1
C3orf70	FOXQ1	0.881	1
C3orf70	GPR50	0.881	1
C3orf70	RUNX1	0.881	1
C3orf70	EXOSC10	0.881	1
C3orf70	THRAP3	0.881	1
C3orf70	ZNF750	0.881	1
C3orf70	EPS8	0.881	1
C3orf70	1q-Amp	0.881	1
CDKN2A	Del_5q12.1	0.881	1
CTNNB1	RIPK4	0.881	1
ERBB2	PPARGC1A	0.881	1
FOXA1	SLC9A4	0.881	1
FOXA1	3p-Amp	0.881	1
FOXQ1	HRAS	0.881	1
FOXQ1	ZFP36L2	0.881	1
FOXQ1	RIPK4	0.881	1
FOXQ1	ZNF626	0.881	1
FOXQ1	CUL1	0.881	1
FOXQ1	3p-Amp	0.881	1
GPR50	HRAS	0.881	1
GPR50	ZFP36L2	0.881	1
GPR50	CUL1	0.881	1
GPR50	3p-Amp	0.881	1
HRAS	NFE2L3	0.881	1
HRAS	RUNX1	0.881	1
HRAS	DCDC1	0.881	1
HRAS	THRAP3	0.881	1
HRAS	WAC	0.881	1
KRAS	ZFP36L2	0.881	1
KRAS	ACTB	0.881	1
KRAS	ZNF626	0.881	1
KRAS	CUL1	0.881	1
KRAS	3p-Amp	0.881	1
METTL3	Amp_3p25.2	0.881	1
NF1	CCNE2	0.881	1
NF1	IL10RB	0.881	1
NF1	PHLDA3	0.881	1
NF1	SCARF2	0.881	1
NFE2L3	ZFP36L2	0.881	1
NFE2L3	ACTB	0.881	1
NFE2L3	RIPK4	0.881	1
NFE2L3	SLC9A4	0.881	1
NRAS	GLTP	0.881	1
NRAS	UBA52	0.881	1
NRAS	ZBTB47	0.881	1
NRAS	HLA-A	0.881	1
NRAS	UNC93B1	0.881	1
PIGS	Del_9p23	0.881	1
PTEN	ACTB	0.881	1
PTEN	RIPK4	0.881	1
PTEN	SLC9A4	0.881	1
PTEN	ZNF626	0.881	1
RB1	Amp_13q22.1	0.881	1
RB1	Del_6p25.3	0.881	1
RB1	Del_16q23.1	0.881	1
RHOA	4p-Del	0.881	1
RUNX1	ACTB	0.881	1
RUNX1	RIPK4	0.881	1
RUNX1	SLC9A4	0.881	1
RUNX1	3p-Amp	0.881	1
SHANK1	CDK12	0.881	1
TP53	Del_22q13.32	0.881	1
ZFP36L2	DCDC1	0.881	1
ZFP36L2	THRAP3	0.881	1
ZFP36L2	1q-Amp	0.881	1
ACTB	EXOSC10	0.881	1
ACTB	THRAP3	0.881	1
ACTB	BAP1	0.881	1
ACTB	EPS8	0.881	1
ATAD5	SPTAN1	0.881	1
ATAD5	Amp_7p11.2	0.881	1
CASP8	SLC9A4	0.881	1
CASP8	ZNF626	0.881	1
CASP8	CUL1	0.881	1
DCDC1	RIPK4	0.881	1
DCDC1	SLC9A4	0.881	1
GLTP	UBA52	0.881	1
GLTP	ZBTB47	0.881	1
GLTP	HLA-A	0.881	1
GLTP	UNC93B1	0.881	1
ITGA4	Amp_19q12	0.881	1
NEK11	Amp_10p14	0.881	1
RIPK4	WAC	0.881	1
RIPK4	CDH1	0.881	1
SLC9A4	THRAP3	0.881	1
SLC9A4	1q-Amp	0.881	1
TXNIP	Amp_10p14	0.881	1
UBA52	ZBTB47	0.881	1
UBA52	HLA-A	0.881	1
UBA52	UNC93B1	0.881	1
WAC	CUL1	0.881	1
ZBTB47	UNC93B1	0.881	1
ZNF626	ZNF750	0.881	1
CDH1	CUL1	0.881	1
CUL1	5p-Amp	0.881	1
CUL1	Del_1p36.11	0.881	1
HLA-A	UNC93B1	0.881	1
3p-Amp	Del_1p36.11	0.881	1
9p-Del	Del_6p25.3	0.881	1
COPZ2	GTF2I	0.882	1
COPZ2	ITGA4	0.882	1
COPZ2	NEK11	0.882	1
COPZ2	PPARGC1A	0.882	1
COPZ2	SSH3	0.882	1
COPZ2	TXNIP	0.882	1
CSMD3	MYO16	0.882	1
DIAPH2	Amp_6p22.3	0.882	1
ELF3	7p-Amp	0.882	1
ELF3	4q-Del	0.882	1
ERBB3	Del_5q12.1	0.882	1
KDM6A	8q-Amp	0.882	1
KPTN	ITGA4	0.882	1
KPTN	NEK11	0.882	1
KPTN	PPARGC1A	0.882	1
KPTN	SSH3	0.882	1
KPTN	TXNIP	0.882	1
KPTN	DNAH6	0.882	1
PTTG1IP	ITGA4	0.882	1
PTTG1IP	NEK11	0.882	1
PTTG1IP	PPARGC1A	0.882	1
PTTG1IP	SSH3	0.882	1
PTTG1IP	TXNIP	0.882	1
PTTG1IP	DNAH6	0.882	1
STAG2	HFM1	0.882	1
STAG2	OGDH	0.882	1
ZFP36L1	Amp_7p21.1	0.882	1
ARID2	Del_6q27	0.882	1
CPD	Amp_6p22.3	0.882	1
DCDC1	Amp_3p25.2	0.882	1
EPHA2	Del_16p13.3	0.882	1
HSP90AA1	ASXL1	0.882	1
MYO16	SPTAN1	0.882	1
THRAP3	Amp_3p25.2	0.882	1
ZNF750	Amp_3p25.2	0.882	1
ASXL1	Del_12p13.1	0.882	1
FAM47C	Amp_5p15.33	0.882	1
FAM47C	Amp_6p22.3	0.882	1
1q-Amp	Amp_3p25.2	0.882	1
7p-Amp	Amp_17q23.3	0.882	1
7p-Amp	Del_3p14.2	0.882	1
18q-Del	Del_16q23.1	0.882	1
8p-Del	Del_9p23	0.882	1
Amp_1p34.2	Amp_6p22.3	0.882	1
Amp_1p34.2	Amp_7p21.1	0.882	1
Amp_6p22.3	Del_17p12	0.882	1
Amp_7p11.2	Amp_11q22.2	0.882	1
ATM	RBM26	0.883	1
ATM	7q-Amp	0.883	1
BTG2	PLCXD3	0.883	1
BTG2	RBP2	0.883	1
BTG2	ADC	0.883	1
BTG2	DAZAP1	0.883	1
C12orf43	PLCXD3	0.883	1
C12orf43	AGR3	0.883	1
C12orf43	RBP2	0.883	1
C12orf43	ADC	0.883	1
C12orf43	DAZAP1	0.883	1
CNNM4	Del_2q22.1	0.883	1
DIAPH2	PARD3	0.883	1
ERCC2	15q-Del	0.883	1
GPS2	Del_2q22.1	0.883	1
HIST1H2AG	PLCXD3	0.883	1
HIST1H2AG	AGR3	0.883	1
HIST1H2AG	RBP2	0.883	1
HIST1H2AG	ADC	0.883	1
HIST1H2AG	DAZAP1	0.883	1
HIST1H3B	CDKN2AIPNL	0.883	1
KLF5	FAM47C	0.883	1
MIPOL1	Amp_8p11.21	0.883	1
NHLRC1	PLCXD3	0.883	1
NHLRC1	AGR3	0.883	1
NHLRC1	ADC	0.883	1
PIK3CA	Del_6p25.3	0.883	1
PIK3CA	Del_16q23.1	0.883	1
PLCXD3	TGIF2LX	0.883	1
PLCXD3	IL10RB	0.883	1
PLCXD3	LETMD1	0.883	1
PLCXD3	PHLDA3	0.883	1
PLCXD3	SNRPB	0.883	1
PLCXD3	TAF11	0.883	1
PLCXD3	SCARF2	0.883	1
PLCXD3	19p-Del	0.883	1
SF1	Amp_8p11.21	0.883	1
TGIF2LX	RBP2	0.883	1
TGIF2LX	ADC	0.883	1
TGIF2LX	DAZAP1	0.883	1
AGR3	CCNE2	0.883	1
AGR3	IL10RB	0.883	1
AGR3	LETMD1	0.883	1
AGR3	PHLDA3	0.883	1
AGR3	TAF11	0.883	1
AGR3	SCARF2	0.883	1
AGR3	19p-Del	0.883	1
CCNE2	DAZAP1	0.883	1
CDKN2AIPNL	GNA13	0.883	1
CDKN2AIPNL	TMCO4	0.883	1
CDKN2AIPNL	17q-Amp	0.883	1
CDKN2AIPNL	Del_1q32.1	0.883	1
CDKN2AIPNL	Del_Xq21.33	0.883	1
DDX3X	Del_2q34	0.883	1
HSP90AA1	Amp_3p25.2	0.883	1
IL10RB	RBP2	0.883	1
IL10RB	DAZAP1	0.883	1
LETMD1	ADC	0.883	1
LETMD1	DAZAP1	0.883	1
NKX2-2	Del_2q22.1	0.883	1
PHLDA3	RBP2	0.883	1
PHLDA3	ADC	0.883	1
PHLDA3	DAZAP1	0.883	1
RBM10	ARID1B	0.883	1
RBP2	SNRPB	0.883	1
RBP2	SCARF2	0.883	1
RBP2	19p-Del	0.883	1
SNRPB	DAZAP1	0.883	1
TAF11	DAZAP1	0.883	1
TFG	Amp_8p11.21	0.883	1
TRERF1	7p-Amp	0.883	1
TRERF1	4q-Del	0.883	1
ADC	SCARF2	0.883	1
ADC	19p-Del	0.883	1
ARID1B	FAM47C	0.883	1
ASXL1	Amp_19q12	0.883	1
DAZAP1	19p-Del	0.883	1
3q-Amp	Del_2q37.1	0.883	1
5p-Amp	Del_4q22.1	0.883	1
8q-Amp	Del_2q37.1	0.883	1
Amp_4q13.3	Del_2q34	0.883	1
Amp_6p22.3	Del_11p15.5	0.883	1
EP300	CDKN2AIPNL	0.884	1
METTL3	Del_8p21.3	0.884	1
NF1	Del_19p13.3	0.884	1
NRAS	Del_9p21.3	0.884	1
PIK3CA	Del_19p13.3	0.884	1
CDKN2AIPNL	11p-Del	0.884	1
CDKN2AIPNL	17p-Del	0.884	1
MED13	Amp_3q26.33	0.884	1
ZBTB47	Amp_19q13.43	0.884	1
20p-Amp	Del_9p23	0.884	1
Amp_3q26.33	Amp_12q15	0.884	1
Amp_3q26.33	Del_16q23.1	0.884	1
Amp_12q15	Del_10q23.31	0.884	1
Del_2q22.1	Del_9p21.3	0.884	1
ASXL2	KDM6A	0.885	1
C3orf70	Amp_6p22.3	0.885	1
CFHR4	SHANK1	0.885	1
ELF3	Del_5q12.1	0.885	1
EP300	Amp_8p11.21	0.885	1
ERBB2	DLX6	0.885	1
ERBB2	FUT5	0.885	1
ERBB3	TSC1	0.885	1
HIST1H3B	Del_13q14.2	0.885	1
HORMAD1	SPTAN1	0.885	1
METTL3	MARK2	0.885	1
METTL3	MBD1	0.885	1
METTL3	Del_Xp11.3	0.885	1
NF1	ITGA4	0.885	1
NF1	NEK11	0.885	1
NF1	DNAH6	0.885	1
PROS1	RHOA	0.885	1
PROS1	SHANK1	0.885	1
PSIP1	MYO16	0.885	1
PSIP1	Amp_11q22.2	0.885	1
RB1	Amp_11q22.2	0.885	1
RHOA	CTCF	0.885	1
RHOA	MBD1	0.885	1
RHOA	PPP4R1	0.885	1
RHOB	ARID2	0.885	1
RHOB	Amp_1p34.2	0.885	1
SF3B1	RBM26	0.885	1
SF3B1	15q-Del	0.885	1
SHANK1	MARK2	0.885	1
SHANK1	PPARG	0.885	1
SHANK1	Del_Xp11.3	0.885	1
ZNF180	Del_15q13.1	0.885	1
CPD	9q-Del	0.885	1
CPD	Del_5q12.1	0.885	1
DDX3X	3q-Amp	0.885	1
DENND5B	22q-Del	0.885	1
MYO16	RBM26	0.885	1
MYO16	7q-Amp	0.885	1
NAA15	6q-Del	0.885	1
NDC80	6q-Del	0.885	1
PSMC6	SPTAN1	0.885	1
PSMC6	Amp_7p11.2	0.885	1
RBM26	Amp_11q22.2	0.885	1
SF3B3	9q-Del	0.885	1
FAM47C	Del_5q12.1	0.885	1
SPTAN1	Amp_6q21	0.885	1
17q-Amp	Del_13q14.2	0.885	1
19q-Amp	3q-Amp	0.885	1
19q-Amp	Del_15q13.1	0.885	1
3p-Amp	Amp_6p22.3	0.885	1
7q-Amp	22q-Del	0.885	1
10q-Del	Amp_4q13.3	0.885	1
9q-Del	Amp_17q23.3	0.885	1
Amp_6p22.3	Del_10q23.31	0.885	1
Amp_22q12.2	Del_17p12	0.885	1
Del_7q36.3	Del_15q13.1	0.885	1
ASXL2	Amp_1p34.2	0.886	1
CDKN2A	ZNF486	0.886	1
CDKN2A	UGP2	0.886	1
HORMAD1	RB1	0.886	1
HORMAD1	9p-Del	0.886	1
IDH1	RHOB	0.886	1
PIGS	RHOB	0.886	1
POTEG	RHOB	0.886	1
PROS1	Del_4q22.1	0.886	1
RB1	STK32B	0.886	1
RB1	CNOT3	0.886	1
RHOB	OR10Z1	0.886	1
ZFP36L1	Amp_17q12	0.886	1
CPD	FAT1	0.886	1
CPD	Del_9p21.3	0.886	1
CTCF	Del_4q22.1	0.886	1
FAT1	CNOT1	0.886	1
RBM10	20q-Amp	0.886	1
RBM10	Del_9p21.3	0.886	1
RBM10	Del_11q23.3	0.886	1
TRERF1	Del_11q23.3	0.886	1
USP28	Del_4q22.1	0.886	1
CNOT1	Del_11q23.3	0.886	1
7p-Amp	Del_2q37.1	0.886	1
Amp_1p34.2	Amp_17q12	0.886	1
Amp_3q26.33	Del_2q22.1	0.886	1
Amp_11q13.3	Del_2q22.1	0.886	1
Del_4q22.1	Del_Xp11.3	0.886	1
BTG2	EP300	0.887	1
BTG2	11p-Del	0.887	1
BTG2	17p-Del	0.887	1
EP300	NHLRC1	0.887	1
EP300	CCNE2	0.887	1
EP300	19p-Del	0.887	1
GTF2I	PIK3CA	0.887	1
GTF2I	8p-Del	0.887	1
IDH1	Amp_11q13.3	0.887	1
KDM6A	Amp_17q23.3	0.887	1
PIGS	Del_10q23.31	0.887	1
PIK3CA	MED13	0.887	1
PIK3CA	SSH3	0.887	1
SARNP	Amp_3q26.33	0.887	1
SHANK1	Del_11p15.5	0.887	1
TGIF2LX	11p-Del	0.887	1
ZNF486	Del_10q23.31	0.887	1
CDKN2AIPNL	Del_18q23	0.887	1
HFM1	Amp_22q12.2	0.887	1
ITGA4	8p-Del	0.887	1
KDM5A	Amp_22q12.2	0.887	1
UGP2	Amp_3q26.33	0.887	1
FUS	Amp_3q26.33	0.887	1
FUS	Del_10q23.31	0.887	1
OGDH	Amp_22q12.2	0.887	1
1q-Amp	Del_11p15.5	0.887	1
20q-Amp	14q-Del	0.887	1
17p-Del	19p-Del	0.887	1
Amp_1q23.3	Del_11q23.3	0.887	1
Del_1p36.11	Del_11p15.5	0.887	1
ARID1A	PKHD1	0.888	1
BTG2	ZFP36L1	0.888	1
C12orf43	ARID2	0.888	1
CFHR4	Amp_1q21.3	0.888	1
CREBBP	GTF2I	0.888	1
DIAPH2	HORMAD1	0.888	1
DIAPH2	ZNF773	0.888	1
ELF3	Amp_13q22.1	0.888	1
ELF3	Amp_17q12	0.888	1
FOXA1	Amp_19q13.43	0.888	1
FOXA1	Del_10q23.31	0.888	1
FOXQ1	Amp_3q26.33	0.888	1
FOXQ1	Amp_11q13.3	0.888	1
GPR50	Amp_3q26.33	0.888	1
GTF2I	TBC1D12	0.888	1
HIST1H2AG	ZFP36L1	0.888	1
HORMAD1	SF3B3	0.888	1
HORMAD1	TRERF1	0.888	1
HORMAD1	FAM47C	0.888	1
KRAS	Amp_19q13.43	0.888	1
MIPOL1	Amp_3p25.2	0.888	1
NF2	CPD	0.888	1
NF2	RBM10	0.888	1
NF2	SF3B3	0.888	1
NF2	CNOT1	0.888	1
NHLRC1	Amp_1p34.2	0.888	1
PLCXD3	18q-Del	0.888	1
PROS1	Amp_1q21.3	0.888	1
PTTG1IP	Amp_1q21.3	0.888	1
RUNX1	Amp_3q26.33	0.888	1
SF1	Amp_3p25.2	0.888	1
ZBTB7B	CPD	0.888	1
ZBTB7B	RBM10	0.888	1
ZBTB7B	TRERF1	0.888	1
ZBTB7B	FAM47C	0.888	1
ZFP36L1	CCNE2	0.888	1
ZFP36L1	IL10RB	0.888	1
ZFP36L1	PHLDA3	0.888	1
ZFP36L1	SNRPB	0.888	1
ZNF511	Amp_1q23.3	0.888	1
ZNF511	Amp_3p25.2	0.888	1
ARID2	CCNE2	0.888	1
ARID2	LETMD1	0.888	1
ARID2	TAF11	0.888	1
ARID2	SCARF2	0.888	1
CCNE2	Amp_1p34.2	0.888	1
CPD	STK32B	0.888	1
CPD	CNOT3	0.888	1
CTCF	Amp_1q21.3	0.888	1
DCDC1	Del_10q23.31	0.888	1
EXOSC10	Amp_19q13.43	0.888	1
ITGA4	Amp_7p21.1	0.888	1
MARK2	Amp_1q21.3	0.888	1
PHLDA3	Amp_1p34.2	0.888	1
PSMC6	SF3B3	0.888	1
PSMC6	TRERF1	0.888	1
RBM10	STK32B	0.888	1
RBM10	ZNF773	0.888	1
RBP2	Del_14q24.1	0.888	1
SF3B3	STK32B	0.888	1
SSH3	Amp_7p21.1	0.888	1
SSH3	Del_11q25	0.888	1
TXNIP	Del_6q27	0.888	1
TXNIP	Del_11q25	0.888	1
WAC	Amp_3q26.33	0.888	1
BAP1	Amp_11q13.3	0.888	1
BAP1	Amp_19q13.43	0.888	1
CNOT1	ZNF773	0.888	1
DNAH6	Del_6q27	0.888	1
EPS8	Amp_11q13.3	0.888	1
FAM47C	ZNF773	0.888	1
FAM47C	Amp_6q21	0.888	1
1q-Amp	Amp_19q13.43	0.888	1
1q-Amp	Del_10q23.31	0.888	1
20p-Amp	3q-Amp	0.888	1
20p-Amp	6q-Del	0.888	1
20p-Amp	Del_15q13.1	0.888	1
3q-Amp	Del_22q13.32	0.888	1
11q-Del	8p-Del	0.888	1
Amp_13q22.1	Del_3p14.2	0.888	1
Amp_16p13.2	Del_13q14.2	0.888	1
Amp_17q12	Del_3p14.2	0.888	1
Amp_17q23.3	Del_6p25.3	0.888	1
Amp_19q13.43	Del_1p36.11	0.888	1
Amp_19q13.43	Del_12p13.1	0.888	1
Amp_20q11.21	Amp_22q12.2	0.888	1
Del_3p14.2	Del_6p25.3	0.888	1
CNNM4	ERBB2	0.889	1
CNNM4	KLF5	0.889	1
CNNM4	PARD3	0.889	1
CNNM4	ARID1B	0.889	1
COPZ2	RPTN	0.889	1
COPZ2	NAA15	0.889	1
COPZ2	NDC80	0.889	1
COPZ2	Amp_4q13.3	0.889	1
COPZ2	Del_7q36.3	0.889	1
CREBBP	DLX6	0.889	1
CREBBP	ZNF185	0.889	1
CREBBP	Amp_8p11.23	0.889	1
ERBB2	GPS2	0.889	1
ERBB2	MIPOL1	0.889	1
ERBB2	ZNF511	0.889	1
FBXW7	NFE2L2	0.889	1
FBXW7	16p-Del	0.889	1
FBXW7	22q-Del	0.889	1
GPS2	KLF5	0.889	1
GPS2	PARD3	0.889	1
IDH1	PIK3CA	0.889	1
KLF5	MIPOL1	0.889	1
KPTN	ZNF180	0.889	1
KPTN	DDX3X	0.889	1
KPTN	NAA15	0.889	1
KPTN	NDC80	0.889	1
KPTN	RARG	0.889	1
KPTN	19q-Amp	0.889	1
KPTN	Del_7q36.3	0.889	1
MIPOL1	ARID1B	0.889	1
NRAS	TSC1	0.889	1
PIGS	Amp_8q22.3	0.889	1
PKHD1	SF3B1	0.889	1
PKHD1	MYO16	0.889	1
PTTG1IP	RPTN	0.889	1
PTTG1IP	ZNF180	0.889	1
PTTG1IP	DDX3X	0.889	1
PTTG1IP	NAA15	0.889	1
PTTG1IP	NDC80	0.889	1
PTTG1IP	RARG	0.889	1
PTTG1IP	19q-Amp	0.889	1
PTTG1IP	Amp_4q13.3	0.889	1
PTTG1IP	Del_7q36.3	0.889	1
RB1	ZBTB47	0.889	1
RHOA	Del_17p12	0.889	1
RXRA	ATAD5	0.889	1
SARNP	Amp_8q22.3	0.889	1
SF1	ARID1B	0.889	1
SF1	Amp_19q12	0.889	1
SF3B1	ATAD5	0.889	1
TSC1	GLTP	0.889	1
TSC1	ZBTB47	0.889	1
ATAD5	MYO16	0.889	1
DLX6	Amp_7p21.1	0.889	1
GLTP	9p-Del	0.889	1
HSP90AA1	Del_11p15.5	0.889	1
MED13	MYO16	0.889	1
MED13	Amp_11q22.2	0.889	1
NKX2-2	PARD3	0.889	1
NKX2-2	ARID1B	0.889	1
NKX2-2	Amp_19q12	0.889	1
TFG	7p-Amp	0.889	1
UGP2	Amp_8q22.3	0.889	1
FUT5	Del_6q27	0.889	1
HLA-A	9p-Del	0.889	1
ZNF185	Amp_7p21.1	0.889	1
ZNF185	Del_6q27	0.889	1
ZNF185	Del_11q25	0.889	1
Amp_7p21.1	Del_16p13.3	0.889	1
Amp_8p11.23	Del_4q34.2	0.889	1
Amp_20q11.21	Del_9p21.3	0.889	1
C3orf70	SPTAN1	0.89	1
HIST1H3B	HFM1	0.89	1
HIST1H3B	KDM5A	0.89	1
HIST1H3B	Amp_4p16.3	0.89	1
IDH1	DLX6	0.89	1
IDH1	FUT5	0.89	1
IDH1	ZNF185	0.89	1
PIGS	DLX6	0.89	1
PIGS	FUT5	0.89	1
PIK3CA	14q-Del	0.89	1
PIK3CA	4p-Del	0.89	1
POTEG	DLX6	0.89	1
POTEG	FUT5	0.89	1
POTEG	ZNF185	0.89	1
RPTN	FAT1	0.89	1
SARNP	DLX6	0.89	1
SARNP	FUT5	0.89	1
SARNP	ZNF185	0.89	1
STAG2	MYO16	0.89	1
ZNF180	Del_11q23.3	0.89	1
ZNF486	DLX6	0.89	1
ZNF486	FUT5	0.89	1
ZNF486	ZNF185	0.89	1
ACTB	Amp_7p11.2	0.89	1
DDX3X	FAT1	0.89	1
DLX6	OR10Z1	0.89	1
DLX6	UGP2	0.89	1
DLX6	FUS	0.89	1
EPHA2	TMCO4	0.89	1
EPHA2	Del_1q32.1	0.89	1
FAT1	NDC80	0.89	1
FAT1	RARG	0.89	1
HFM1	TMCO4	0.89	1
HFM1	Del_1q32.1	0.89	1
KDM5A	TMCO4	0.89	1
NAA15	20q-Amp	0.89	1
NCOA1	TMCO4	0.89	1
OR10Z1	ZNF185	0.89	1
SLC9A4	SPTAN1	0.89	1
UGP2	FUT5	0.89	1
UGP2	ZNF185	0.89	1
CUL1	SPTAN1	0.89	1
FUS	FUT5	0.89	1
FUS	ZNF185	0.89	1
GNA13	OGDH	0.89	1
OGDH	TMCO4	0.89	1
OGDH	Del_1q32.1	0.89	1
TMCO4	5p-Amp	0.89	1
TMCO4	Amp_4p16.3	0.89	1
20q-Amp	Amp_4q13.3	0.89	1
20q-Amp	Del_2q37.1	0.89	1
20q-Amp	Del_7q36.3	0.89	1
16p-Del	Amp_8p11.23	0.89	1
Amp_20q11.21	Del_11q23.3	0.89	1
ELF3	ZFP36L1	0.891	1
ELF3	ARID2	0.891	1
ELF3	Amp_1p34.2	0.891	1
ERBB2	ERBB3	0.891	1
HORMAD1	Del_6p25.3	0.891	1
NF2	Del_16q23.1	0.891	1
PKHD1	Amp_12q15	0.891	1
PKHD1	Del_6p25.3	0.891	1
RB1	RPTN	0.891	1
RB1	NDC80	0.891	1
RHOA	TP53	0.891	1
RXRA	Del_16q23.1	0.891	1
SF3B1	Del_16q23.1	0.891	1
SHANK1	TP53	0.891	1
ZFP36L2	Amp_20q11.21	0.891	1
AGR3	Amp_1q21.3	0.891	1
HSP90AA1	Del_6q27	0.891	1
NDC80	9p-Del	0.891	1
PSMC6	Amp_13q22.1	0.891	1
RIPK4	Amp_20q11.21	0.891	1
STK32B	Amp_13q22.1	0.891	1
STK32B	Del_6p25.3	0.891	1
STK32B	Del_16q23.1	0.891	1
CNOT3	Amp_12q15	0.891	1
CNOT3	Amp_13q22.1	0.891	1
CNOT3	Del_6p25.3	0.891	1
CNOT3	Del_16q23.1	0.891	1
DAZAP1	Amp_1q21.3	0.891	1
3p-Amp	Amp_20q11.21	0.891	1
22q-Del	Amp_13q22.1	0.891	1
Amp_1p34.2	Amp_17q23.3	0.891	1
Amp_1q23.3	Del_4q34.2	0.891	1
Amp_11q22.2	Amp_13q22.1	0.891	1
Amp_11q22.2	Del_6p25.3	0.891	1
ARID1A	C12orf43	0.892	1
ARID1A	HIST1H2AG	0.892	1
ARID1A	NHLRC1	0.892	1
ARID1A	CCNE2	0.892	1
ARID1A	22q-Del	0.892	1
ATM	PIGS	0.892	1
ATM	POTEG	0.892	1
C12orf43	Amp_5p15.33	0.892	1
DIAPH2	Del_13q14.2	0.892	1
EP300	Del_16q23.1	0.892	1
ERCC2	11q-Del	0.892	1
HIST1H2AG	8q-Amp	0.892	1
HORMAD1	CDKN2AIPNL	0.892	1
RPTN	ZNF180	0.892	1
ZNF180	NAA15	0.892	1
ZNF180	NDC80	0.892	1
ZNF180	19q-Amp	0.892	1
ZNF180	Amp_4q13.3	0.892	1
ZNF486	Del_4q34.2	0.892	1
ZNF511	Del_11p15.5	0.892	1
CCNE2	Del_18q23	0.892	1
CDKN2AIPNL	PSMC6	0.892	1
CDKN2AIPNL	CNOT3	0.892	1
CDKN2AIPNL	ZNF773	0.892	1
CDKN2AIPNL	Amp_6q21	0.892	1
DDX3X	RARG	0.892	1
DDX3X	19q-Amp	0.892	1
EPHA2	Del_14q24.1	0.892	1
HSP90AA1	11p-Del	0.892	1
IL10RB	Amp_5p15.33	0.892	1
NAA15	RARG	0.892	1
NAA15	19q-Amp	0.892	1
NDC80	19q-Amp	0.892	1
RBM26	Del_4q22.1	0.892	1
SNRPB	8q-Amp	0.892	1
SNRPB	Amp_5p15.33	0.892	1
UGP2	Del_4q34.2	0.892	1
CNOT1	Del_13q14.2	0.892	1
SCARF2	Del_18q23	0.892	1
7q-Amp	Del_4q22.1	0.892	1
11p-Del	Amp_13q22.1	0.892	1
19p-Del	Amp_5p15.33	0.892	1
19p-Del	Del_18q23	0.892	1
5q-Del	Amp_7p21.1	0.892	1
5q-Del	Del_11q25	0.892	1
Amp_5p15.33	Amp_11q22.2	0.892	1
ARID1A	ZNF773	0.893	1
ASXL2	DPYS	0.893	1
ASXL2	PPARG	0.893	1
ATM	ATAD5	0.893	1
ATM	Del_4q22.1	0.893	1
C3orf70	EP300	0.893	1
C3orf70	17p-Del	0.893	1
COPZ2	Amp_20q11.21	0.893	1
CTNNB1	ITGA4	0.893	1
CTNNB1	TXNIP	0.893	1
ELF3	DLX6	0.893	1
EP300	ZNF626	0.893	1
EP300	3p-Amp	0.893	1
ERCC2	PLCXD3	0.893	1
ERCC2	ADC	0.893	1
FOXQ1	ITGA4	0.893	1
FOXQ1	NEK11	0.893	1
FOXQ1	SSH3	0.893	1
FOXQ1	DNAH6	0.893	1
GPR50	GTF2I	0.893	1
GPR50	ITGA4	0.893	1
GPR50	NEK11	0.893	1
GPR50	PPARGC1A	0.893	1
GPR50	SSH3	0.893	1
GPR50	TXNIP	0.893	1
GPR50	DNAH6	0.893	1
GTF2I	DCDC1	0.893	1
GTF2I	EXOSC10	0.893	1
GTF2I	THRAP3	0.893	1
GTF2I	BAP1	0.893	1
GTF2I	CDH1	0.893	1
GTF2I	EPS8	0.893	1
GTF2I	1q-Amp	0.893	1
GTF2I	Del_5q12.1	0.893	1
IDH1	Amp_22q12.2	0.893	1
KLF5	6q-Del	0.893	1
KRAS	ITGA4	0.893	1
KRAS	NEK11	0.893	1
KRAS	SSH3	0.893	1
NFE2L3	ITGA4	0.893	1
NFE2L3	NEK11	0.893	1
NFE2L3	SSH3	0.893	1
PIGS	Amp_22q12.2	0.893	1
POTEG	Amp_22q12.2	0.893	1
PROS1	Amp_6p22.3	0.893	1
PTEN	ITGA4	0.893	1
PTEN	NEK11	0.893	1
PTEN	PPARGC1A	0.893	1
PTEN	SSH3	0.893	1
PTEN	TXNIP	0.893	1
RHOB	Del_11p15.5	0.893	1
RUNX1	NEK11	0.893	1
RUNX1	PPARGC1A	0.893	1
RUNX1	TXNIP	0.893	1
STAG2	5q-Del	0.893	1
TP53	ZNF773	0.893	1
CASP8	DNAH6	0.893	1
CPD	Del_2q22.1	0.893	1
DCDC1	SSH3	0.893	1
DLX6	Amp_17q23.3	0.893	1
DPYS	Amp_6p22.3	0.893	1
EXOSC10	ITGA4	0.893	1
EXOSC10	NEK11	0.893	1
IKZF2	ITGA4	0.893	1
ITGA4	THRAP3	0.893	1
ITGA4	WAC	0.893	1
ITGA4	EPS8	0.893	1
ITGA4	1q-Amp	0.893	1
ITGA4	9q-Del	0.893	1
ITGA4	Del_1p36.11	0.893	1
MBD1	Amp_6p22.3	0.893	1
NEK11	1q-Amp	0.893	1
NEK11	Del_1p36.11	0.893	1
OR10Z1	Amp_22q12.2	0.893	1
PPARG	Amp_17q12	0.893	1
PPARGC1A	WAC	0.893	1
PPARGC1A	1q-Amp	0.893	1
SSH3	ZNF750	0.893	1
SSH3	1q-Amp	0.893	1
THRAP3	DNAH6	0.893	1
TXNIP	CDH1	0.893	1
TXNIP	EPS8	0.893	1
TXNIP	Del_5q12.1	0.893	1
WAC	DNAH6	0.893	1
BAP1	DNAH6	0.893	1
FAM47C	Del_2q22.1	0.893	1
FUT5	Del_3p14.2	0.893	1
GNA13	18q-Del	0.893	1
ZNF185	Del_3p14.2	0.893	1
17q-Amp	Del_14q24.1	0.893	1
20p-Amp	Del_14q24.1	0.893	1
3p-Amp	11p-Del	0.893	1
3q-Amp	Del_15q13.1	0.893	1
8p-Del	Amp_22q12.2	0.893	1
9p-Del	Amp_1q21.3	0.893	1
Amp_17q12	Del_Xp11.3	0.893	1
Del_14q24.1	Del_Xq21.33	0.893	1
ATM	CTNNB1	0.894	1
ATM	KRAS	0.894	1
ATM	EXOSC10	0.894	1
ATM	CDH1	0.894	1
ATM	EPS8	0.894	1
CNNM4	Amp_7p21.1	0.894	1
CNNM4	Del_6q27	0.894	1
CNNM4	Del_11q25	0.894	1
CREBBP	GPS2	0.894	1
FBXW7	RARG	0.894	1
FBXW7	Del_7q36.3	0.894	1
FOXQ1	Del_4q34.2	0.894	1
GPS2	Amp_7p21.1	0.894	1
GTF2I	ZFP36L1	0.894	1
KDM6A	ZFP36L1	0.894	1
MIPOL1	TBC1D12	0.894	1
PKHD1	RPTN	0.894	1
PTEN	Amp_8q22.3	0.894	1
RPTN	MED13	0.894	1
RUNX1	Amp_8q22.3	0.894	1
RUNX1	Del_4q34.2	0.894	1
SF1	TBC1D12	0.894	1
SF1	Amp_7p21.1	0.894	1
TBC1D12	TFG	0.894	1
TSC1	MED13	0.894	1
ZFP36L1	ITGA4	0.894	1
ZFP36L1	NEK11	0.894	1
ZNF180	MED13	0.894	1
AGR3	Amp_6p22.3	0.894	1
CPD	11q-Del	0.894	1
DCDC1	Del_4q34.2	0.894	1
DDX3X	MED13	0.894	1
DDX3X	Amp_16p13.2	0.894	1
EXOSC10	Del_4q34.2	0.894	1
ITGA4	Amp_1p34.2	0.894	1
MED13	RARG	0.894	1
MED13	Amp_4q13.3	0.894	1
NEK11	Amp_1p34.2	0.894	1
NKX2-2	Amp_7p21.1	0.894	1
RBM10	11q-Del	0.894	1
RBM10	5q-Del	0.894	1
TFG	Del_6q27	0.894	1
TFG	Del_11q25	0.894	1
TRERF1	5q-Del	0.894	1
TXNIP	Amp_1p34.2	0.894	1
WAC	Amp_8q22.3	0.894	1
CNOT1	5q-Del	0.894	1
CNOT1	Del_19p13.3	0.894	1
FAM47C	5q-Del	0.894	1
17q-Amp	Del_9p23	0.894	1
1q-Amp	Del_4q34.2	0.894	1
7q-Amp	Amp_10p14	0.894	1
Amp_8q22.3	Del_1p36.11	0.894	1
CDKN2A	Del_2q34	0.895	1
ELF3	TXNIP	0.895	1
GTF2I	Amp_17q23.3	0.895	1
KLF5	PIK3CA	0.895	1
NRAS	3q-Amp	0.895	1
PIK3CA	4q-Del	0.895	1
EPHA2	Amp_11q13.3	0.895	1
EPHA2	Del_10q23.31	0.895	1
GLTP	3q-Amp	0.895	1
GLTP	6q-Del	0.895	1
HFM1	Del_10q23.31	0.895	1
HSP90AA1	RBM10	0.895	1
ITGA4	Amp_17q23.3	0.895	1
NEK11	Del_3p14.2	0.895	1
PPARGC1A	Amp_17q23.3	0.895	1
UBA52	6q-Del	0.895	1
UBA52	Del_15q13.1	0.895	1
ZBTB47	Del_15q13.1	0.895	1
DNAH6	Amp_17q23.3	0.895	1
HLA-A	10q-Del	0.895	1
HLA-A	6q-Del	0.895	1
UNC93B1	3q-Amp	0.895	1
UNC93B1	10q-Del	0.895	1
18q-Del	Del_11q23.3	0.895	1
Amp_3q26.33	Amp_4p16.3	0.895	1
Amp_4p16.3	Amp_11q13.3	0.895	1
Amp_8p11.21	Del_18q23	0.895	1
C3orf70	PROS1	0.896	1
C3orf70	CTCF	0.896	1
C3orf70	MBD1	0.896	1
C3orf70	PPARG	0.896	1
C3orf70	PPP4R1	0.896	1
C3orf70	USP28	0.896	1
C3orf70	14q-Del	0.896	1
C3orf70	4p-Del	0.896	1
C3orf70	Del_Xp11.3	0.896	1
CFHR4	CSMD3	0.896	1
CFHR4	ZFP36L2	0.896	1
CFHR4	ACTB	0.896	1
CFHR4	ZNF626	0.896	1
CFHR4	3p-Amp	0.896	1
COPZ2	CTNNB1	0.896	1
COPZ2	FOXA1	0.896	1
COPZ2	FOXQ1	0.896	1
COPZ2	GPR50	0.896	1
COPZ2	KRAS	0.896	1
COPZ2	RUNX1	0.896	1
COPZ2	DCDC1	0.896	1
COPZ2	EXOSC10	0.896	1
COPZ2	IKZF2	0.896	1
COPZ2	THRAP3	0.896	1
COPZ2	WAC	0.896	1
COPZ2	ZNF750	0.896	1
COPZ2	BAP1	0.896	1
COPZ2	CDH1	0.896	1
COPZ2	1q-Amp	0.896	1
COPZ2	Del_1p36.11	0.896	1
CSMD3	METTL3	0.896	1
CSMD3	RHOA	0.896	1
CSMD3	SHANK1	0.896	1
CSMD3	Del_Xp11.3	0.896	1
CTNNB1	KPTN	0.896	1
CTNNB1	PTTG1IP	0.896	1
EP300	10q-Del	0.896	1
FOXA1	KPTN	0.896	1
FOXA1	PTTG1IP	0.896	1
FOXQ1	KPTN	0.896	1
FOXQ1	PTTG1IP	0.896	1
FOXQ1	TSC1	0.896	1
GPR50	KPTN	0.896	1
GPR50	PTTG1IP	0.896	1
HRAS	PROS1	0.896	1
HRAS	CDK12	0.896	1
HRAS	PPP4R1	0.896	1
HRAS	USP28	0.896	1
KLF5	RBM26	0.896	1
KLF5	7q-Amp	0.896	1
KPTN	KRAS	0.896	1
KPTN	NFE2L3	0.896	1
KPTN	PTEN	0.896	1
KPTN	RUNX1	0.896	1
KPTN	CASP8	0.896	1
KPTN	DCDC1	0.896	1
KPTN	EXOSC10	0.896	1
KPTN	IKZF2	0.896	1
KPTN	THRAP3	0.896	1
KPTN	ZNF750	0.896	1
KPTN	CDH1	0.896	1
KPTN	EPS8	0.896	1
KPTN	1q-Amp	0.896	1
KPTN	Del_1p36.11	0.896	1
NFE2L3	PTTG1IP	0.896	1
PROS1	ZFP36L2	0.896	1
PROS1	ACTB	0.896	1
PROS1	RIPK4	0.896	1
PROS1	SLC9A4	0.896	1
PROS1	ZNF626	0.896	1
PTEN	PTTG1IP	0.896	1
PTTG1IP	RUNX1	0.896	1
PTTG1IP	CASP8	0.896	1
PTTG1IP	DCDC1	0.896	1
PTTG1IP	EXOSC10	0.896	1
PTTG1IP	IKZF2	0.896	1
PTTG1IP	THRAP3	0.896	1
PTTG1IP	WAC	0.896	1
PTTG1IP	BAP1	0.896	1
PTTG1IP	CDH1	0.896	1
PTTG1IP	EPS8	0.896	1
PTTG1IP	1q-Amp	0.896	1
PTTG1IP	Del_1p36.11	0.896	1
RPTN	Amp_8p11.21	0.896	1
RPTN	Del_2q22.1	0.896	1
ZFP36L2	DPYS	0.896	1
ZFP36L2	MARK2	0.896	1
ZFP36L2	PPP4R1	0.896	1
ZFP36L2	Del_Xp11.3	0.896	1
ACTB	CTCF	0.896	1
ACTB	DPYS	0.896	1
ACTB	MARK2	0.896	1
ACTB	PPARG	0.896	1
CDK12	RIPK4	0.896	1
CDK12	ZNF626	0.896	1
CTCF	SLC9A4	0.896	1
DPYS	SLC9A4	0.896	1
DPYS	CUL1	0.896	1
DPYS	3p-Amp	0.896	1
MARK2	RIPK4	0.896	1
MARK2	CUL1	0.896	1
MBD1	RIPK4	0.896	1
PARD3	RBM26	0.896	1
PARD3	7q-Amp	0.896	1
PPARG	RIPK4	0.896	1
PPARG	SLC9A4	0.896	1
PPARG	ZNF626	0.896	1
PPARG	CUL1	0.896	1
RBM10	Del_8p23.3	0.896	1
RBM26	ARID1B	0.896	1
RIPK4	USP28	0.896	1
RIPK4	Del_Xp11.3	0.896	1
SLC9A4	USP28	0.896	1
SLC9A4	Del_Xp11.3	0.896	1
USP28	3p-Amp	0.896	1
ZNF626	14q-Del	0.896	1
CUL1	14q-Del	0.896	1
SPTAN1	Del_4q22.1	0.896	1
19q-Amp	Amp_8p11.21	0.896	1
20p-Amp	Del_9p21.3	0.896	1
3q-Amp	11p-Del	0.896	1
3q-Amp	Del_2q34	0.896	1
7q-Amp	4q-Del	0.896	1
Amp_3p25.2	Del_16p13.3	0.896	1
Amp_4q13.3	Amp_8p11.21	0.896	1
Amp_8p11.21	Del_7q36.3	0.896	1
ARID1A	PTEN	0.897	1
ARID1A	IKZF2	0.897	1
ARID1A	ZNF750	0.897	1
ARID1A	EPS8	0.897	1
ARID1A	1q-Amp	0.897	1
ASXL2	Amp_3q26.33	0.897	1
ASXL2	Del_10q23.31	0.897	1
C3orf70	Amp_12q15	0.897	1
CNNM4	ASXL1	0.897	1
HORMAD1	20p-Amp	0.897	1
HORMAD1	15q-Del	0.897	1
HORMAD1	Del_22q13.32	0.897	1
KRAS	Amp_5p15.33	0.897	1
MIPOL1	ASXL1	0.897	1
NF2	RBM26	0.897	1
NRAS	PLCXD3	0.897	1
NRAS	AGR3	0.897	1
NRAS	RBP2	0.897	1
NRAS	ADC	0.897	1
NRAS	DAZAP1	0.897	1
PLCXD3	GLTP	0.897	1
PLCXD3	UBA52	0.897	1
PLCXD3	ZBTB47	0.897	1
PLCXD3	HLA-A	0.897	1
PLCXD3	UNC93B1	0.897	1
PSIP1	PSMC6	0.897	1
PSIP1	CNOT3	0.897	1
RHOB	18q-Del	0.897	1
SF1	HSP90AA1	0.897	1
SF1	Del_12p13.1	0.897	1
ZBTB7B	DENND5B	0.897	1
ZBTB7B	RBM26	0.897	1
ZBTB7B	7q-Amp	0.897	1
ZFP36L2	Del_6p25.3	0.897	1
ZNF511	HSP90AA1	0.897	1
AGR3	GLTP	0.897	1
AGR3	ZBTB47	0.897	1
AGR3	HLA-A	0.897	1
AGR3	UNC93B1	0.897	1
CTCF	Amp_20q11.21	0.897	1
DENND5B	STK32B	0.897	1
DENND5B	CNOT3	0.897	1
GLTP	RBP2	0.897	1
GLTP	ADC	0.897	1
GLTP	DAZAP1	0.897	1
PPARG	Amp_20q11.21	0.897	1
PSMC6	7q-Amp	0.897	1
PSMC6	15q-Del	0.897	1
RBM26	STK32B	0.897	1
RBM26	ZNF773	0.897	1
RBM26	Amp_6q21	0.897	1
RBP2	UBA52	0.897	1
RBP2	ZBTB47	0.897	1
SLC9A4	Del_6p25.3	0.897	1
UBA52	ADC	0.897	1
USP28	Amp_20q11.21	0.897	1
ZBTB47	ADC	0.897	1
ZBTB47	DAZAP1	0.897	1
ZBTB47	Del_8p23.3	0.897	1
ZNF626	Amp_13q22.1	0.897	1
ZNF626	Del_6p25.3	0.897	1
ZNF626	Del_16q23.1	0.897	1
ADC	HLA-A	0.897	1
ADC	UNC93B1	0.897	1
DAZAP1	HLA-A	0.897	1
DAZAP1	UNC93B1	0.897	1
FUT5	Del_9p21.3	0.897	1
ZNF773	15q-Del	0.897	1
20p-Amp	9p-Del	0.897	1
3p-Amp	Amp_12q15	0.897	1
Amp_8p11.21	Del_4q34.2	0.897	1
Del_2q22.1	Del_4q34.2	0.897	1
Del_4q34.2	Del_9p23	0.897	1
ARID1A	RB1	0.898	1
DIAPH2	5p-Amp	0.898	1
ERBB2	17p-Del	0.898	1
ERBB3	3q-Amp	0.898	1
ERBB3	6q-Del	0.898	1
ERBB3	Del_15q13.1	0.898	1
NFE2L2	EPHA2	0.898	1
NFE2L2	NCOA1	0.898	1
NFE2L2	OGDH	0.898	1
PLCXD3	Del_4q22.1	0.898	1
RB1	HFM1	0.898	1
RXRA	HFM1	0.898	1
SF3B1	KDM5A	0.898	1
SF3B1	NCOA1	0.898	1
SF3B1	OGDH	0.898	1
SF3B1	Amp_4p16.3	0.898	1
CPD	5p-Amp	0.898	1
EPHA2	MYO16	0.898	1
EPHA2	Amp_11q22.2	0.898	1
HFM1	MYO16	0.898	1
KDM5A	16p-Del	0.898	1
KDM5A	22q-Del	0.898	1
KDM5A	Amp_11q22.2	0.898	1
MYO16	NCOA1	0.898	1
SF3B3	5p-Amp	0.898	1
ASXL1	Del_18q23	0.898	1
DAZAP1	Amp_20q11.21	0.898	1
DAZAP1	Del_4q22.1	0.898	1
Amp_8p11.21	Del_9p23	0.898	1
Del_2q22.1	Del_9p23	0.898	1
Del_12p13.1	Del_18q23	0.898	1
CNNM4	ELF3	0.899	1
CNNM4	Del_3p14.2	0.899	1
ELF3	GPS2	0.899	1
ELF3	HSP90AA1	0.899	1
ELF3	Del_12p13.1	0.899	1
GTF2I	Del_13q14.2	0.899	1
HRAS	8q-Amp	0.899	1
MIPOL1	Del_3p14.2	0.899	1
NF1	Amp_11q13.3	0.899	1
NKX2-2	Amp_17q23.3	0.899	1
PARD3	Amp_7p11.2	0.899	1
TFG	Amp_17q23.3	0.899	1
ASXL1	Amp_17q23.3	0.899	1
DNAH6	Del_13q14.2	0.899	1
Amp_1p34.2	Amp_8p11.23	0.899	1
Amp_13q22.1	Del_11p15.5	0.899	1
Del_3p14.2	Del_12p13.1	0.899	1
ASXL2	PSIP1	0.9	1
ASXL2	RBM26	0.9	1
CDKN1A	CFHR4	0.9	1
CDKN1A	DPYS	0.9	1
CDKN1A	Del_Xp11.3	0.9	1
COPZ2	Amp_3p25.2	0.9	1
ERBB2	TBC1D12	0.9	1
ERBB2	Amp_5p15.33	0.9	1
ERCC2	HIST1H3B	0.9	1
ERCC2	GNA13	0.9	1
ERCC2	17q-Amp	0.9	1
ERCC2	Del_1q32.1	0.9	1
ERCC2	Del_Xq21.33	0.9	1
METTL3	GNA13	0.9	1
METTL3	Del_1q32.1	0.9	1
METTL3	Del_Xq21.33	0.9	1
NF1	RXRA	0.9	1
PIK3CA	Del_22q13.32	0.9	1
PSIP1	Amp_1q21.3	0.9	1
PSIP1	Amp_17q12	0.9	1
RHOA	TMCO4	0.9	1
RHOA	17q-Amp	0.9	1
RXRA	20p-Amp	0.9	1
SHANK1	TMCO4	0.9	1
SHANK1	Del_Xq21.33	0.9	1
TBC1D12	Amp_19q12	0.9	1
DPYS	11q-Del	0.9	1
DPYS	5q-Del	0.9	1
DPYS	Del_19p13.3	0.9	1
MBD1	11q-Del	0.9	1
MBD1	5q-Del	0.9	1
PPP4R1	5q-Del	0.9	1
USP28	11q-Del	0.9	1
USP28	Del_19p13.3	0.9	1
GNA13	Del_8p21.3	0.9	1
20p-Amp	16p-Del	0.9	1
20p-Amp	Amp_17q23.3	0.9	1
Amp_1q21.3	Amp_7p11.2	0.9	1
Amp_3q26.33	Del_10q23.31	0.9	1
Amp_6q21	Amp_10p14	0.9	1
Amp_17q23.3	Del_22q13.32	0.9	1
Del_1q32.1	Del_8p21.3	0.9	1
Del_2q22.1	Del_3p14.2	0.9	1
ARID1A	ZNF185	0.901	1
C12orf43	CDK12	0.901	1
C12orf43	4p-Del	0.901	1
CFHR4	STAG2	0.901	1
CNNM4	CDKN2AIPNL	0.901	1
DIAPH2	ERBB2	0.901	1
ERBB3	Amp_7p21.1	0.901	1
ERBB3	Del_6q27	0.901	1
FBXW7	UBA52	0.901	1
FBXW7	HLA-A	0.901	1
GPS2	CDKN2AIPNL	0.901	1
HIST1H2AG	CDK12	0.901	1
HIST1H2AG	4p-Del	0.901	1
HIST1H3B	11p-Del	0.901	1
HIST1H3B	17p-Del	0.901	1
IDH1	RXRA	0.901	1
IDH1	SF3B1	0.901	1
IDH1	MYO16	0.901	1
METTL3	Amp_22q12.2	0.901	1
MIPOL1	CDKN2AIPNL	0.901	1
NFE2L2	PIGS	0.901	1
NFE2L2	FUS	0.901	1
NHLRC1	CDK12	0.901	1
NHLRC1	14q-Del	0.901	1
NRAS	MED13	0.901	1
NRAS	Amp_16p13.2	0.901	1
PIGS	SF3B1	0.901	1
PIGS	16p-Del	0.901	1
PIGS	Del_2q34	0.901	1
PKHD1	UNC93B1	0.901	1
PKHD1	20p-Amp	0.901	1
POTEG	MYO16	0.901	1
POTEG	16p-Del	0.901	1
POTEG	22q-Del	0.901	1
POTEG	Amp_11q22.2	0.901	1
RXRA	UGP2	0.901	1
SARNP	MYO16	0.901	1
SARNP	22q-Del	0.901	1
SF1	CDKN2AIPNL	0.901	1
SF3B1	ZNF486	0.901	1
SF3B1	UGP2	0.901	1
STAG2	DPYS	0.901	1
STAG2	MARK2	0.901	1
STAG2	MBD1	0.901	1
STAG2	PPARG	0.901	1
STAG2	PPP4R1	0.901	1
TGIF2LX	CDK12	0.901	1
TGIF2LX	4p-Del	0.901	1
ZNF486	22q-Del	0.901	1
ZNF486	Amp_11q22.2	0.901	1
ZNF511	CDKN2AIPNL	0.901	1
ATAD5	HLA-A	0.901	1
CCNE2	4p-Del	0.901	1
CDK12	IL10RB	0.901	1
CDK12	LETMD1	0.901	1
CDK12	SNRPB	0.901	1
CDK12	Del_18q23	0.901	1
CDKN2AIPNL	NKX2-2	0.901	1
CDKN2AIPNL	TFG	0.901	1
CDKN2AIPNL	Amp_8p11.23	0.901	1
CTCF	Del_16p13.3	0.901	1
DLX6	SPTAN1	0.901	1
DLX6	Amp_7p11.2	0.901	1
GLTP	MED13	0.901	1
LETMD1	14q-Del	0.901	1
LETMD1	4p-Del	0.901	1
MBD1	Amp_8p11.23	0.901	1
MBD1	Del_16p13.3	0.901	1
MED13	ZBTB47	0.901	1
MED13	HLA-A	0.901	1
MED13	UNC93B1	0.901	1
MED13	Del_2q37.1	0.901	1
MYO16	OR10Z1	0.901	1
MYO16	UGP2	0.901	1
MYO16	FUS	0.901	1
OR10Z1	Amp_11q22.2	0.901	1
OR10Z1	Del_2q34	0.901	1
RBM10	Amp_19q12	0.901	1
UGP2	22q-Del	0.901	1
UGP2	Amp_11q22.2	0.901	1
UGP2	Del_2q34	0.901	1
ZBTB47	Amp_16p13.2	0.901	1
FUS	16p-Del	0.901	1
FUS	Amp_11q22.2	0.901	1
UNC93B1	Amp_16p13.2	0.901	1
ZNF185	Amp_7p11.2	0.901	1
20p-Amp	Amp_16p13.2	0.901	1
3q-Amp	Del_8p21.3	0.901	1
8q-Amp	Amp_12q15	0.901	1
11p-Del	Del_1q32.1	0.901	1
14q-Del	Amp_5p15.33	0.901	1
17p-Del	Del_Xq21.33	0.901	1
5q-Del	Amp_17q23.3	0.901	1
Del_16p13.3	Del_Xp11.3	0.901	1
Del_16q23.1	Del_18q23	0.901	1
BTG2	DLX6	0.902	1
C12orf43	DLX6	0.902	1
C12orf43	FUT5	0.902	1
C12orf43	ZNF185	0.902	1
ELF3	Amp_8p11.23	0.902	1
ERBB2	RPTN	0.902	1
ERBB2	NAA15	0.902	1
ERBB2	RARG	0.902	1
FOXA1	Del_2q37.1	0.902	1
HIST1H2AG	DLX6	0.902	1
HIST1H2AG	FUT5	0.902	1
HIST1H2AG	ZNF185	0.902	1
HIST1H3B	PIK3CA	0.902	1
METTL3	STAG2	0.902	1
NF1	RPTN	0.902	1
NF1	DDX3X	0.902	1
NF1	NAA15	0.902	1
NF1	19q-Amp	0.902	1
NF1	Amp_4q13.3	0.902	1
NF1	Del_7q36.3	0.902	1
NHLRC1	FUT5	0.902	1
NHLRC1	ZNF185	0.902	1
PIK3CA	GNA13	0.902	1
PIK3CA	TMCO4	0.902	1
TGIF2LX	DLX6	0.902	1
TGIF2LX	FUT5	0.902	1
TGIF2LX	ZNF185	0.902	1
CCNE2	DLX6	0.902	1
CCNE2	FUT5	0.902	1
CCNE2	ZNF185	0.902	1
DLX6	LETMD1	0.902	1
DLX6	PHLDA3	0.902	1
DLX6	SNRPB	0.902	1
DLX6	TAF11	0.902	1
DLX6	SCARF2	0.902	1
DLX6	19p-Del	0.902	1
IL10RB	FUT5	0.902	1
IL10RB	ZNF185	0.902	1
LETMD1	FUT5	0.902	1
LETMD1	ZNF185	0.902	1
PHLDA3	FUT5	0.902	1
PHLDA3	ZNF185	0.902	1
RIPK4	Amp_5p15.33	0.902	1
SLC9A4	Amp_5p15.33	0.902	1
SNRPB	FUT5	0.902	1
TAF11	FUT5	0.902	1
TAF11	ZNF185	0.902	1
WAC	Del_2q37.1	0.902	1
FUT5	SCARF2	0.902	1
FUT5	19p-Del	0.902	1
SCARF2	ZNF185	0.902	1
ZNF185	19p-Del	0.902	1
Amp_6p22.3	Del_15q13.1	0.902	1
Amp_7p11.2	Del_8p21.3	0.902	1
Amp_8p11.23	Del_13q14.2	0.902	1
ARID1A	Amp_3p25.2	0.903	1
ASXL2	RBP2	0.903	1
ERBB3	ZNF773	0.903	1
FBXW7	7p-Amp	0.903	1
FOXA1	10q-Del	0.903	1
FOXA1	6q-Del	0.903	1
FOXQ1	3q-Amp	0.903	1
FOXQ1	6q-Del	0.903	1
GPR50	3q-Amp	0.903	1
GTF2I	TP53	0.903	1
KPTN	Del_11p15.5	0.903	1
NFE2L3	10q-Del	0.903	1
NFE2L3	6q-Del	0.903	1
NRAS	Amp_1q23.3	0.903	1
PIK3CA	NCOA1	0.903	1
PIK3CA	Amp_4p16.3	0.903	1
PLCXD3	Amp_17q12	0.903	1
PTEN	10q-Del	0.903	1
PTEN	Del_15q13.1	0.903	1
RHOB	Del_8p21.3	0.903	1
RPTN	Del_8p23.3	0.903	1
RXRA	Amp_6p22.3	0.903	1
SF3B1	Amp_6p22.3	0.903	1
TP53	PPARGC1A	0.903	1
ATAD5	7p-Amp	0.903	1
DCDC1	10q-Del	0.903	1
EXOSC10	10q-Del	0.903	1
EXOSC10	Del_15q13.1	0.903	1
MED13	PARD3	0.903	1
MYO16	Amp_6p22.3	0.903	1
RBP2	Amp_17q12	0.903	1
THRAP3	Del_15q13.1	0.903	1
WAC	3q-Amp	0.903	1
WAC	6q-Del	0.903	1
WAC	Del_15q13.1	0.903	1
BAP1	Del_15q13.1	0.903	1
EPS8	10q-Del	0.903	1
EPS8	6q-Del	0.903	1
EPS8	Del_15q13.1	0.903	1
UNC93B1	Amp_1q23.3	0.903	1
1q-Amp	10q-Del	0.903	1
1q-Amp	6q-Del	0.903	1
8q-Amp	Amp_11q13.3	0.903	1
10q-Del	Del_1p36.11	0.903	1
6q-Del	Del_1p36.11	0.903	1
8p-Del	Amp_7p11.2	0.903	1
Amp_3q26.33	Del_18q23	0.903	1
Amp_4p16.3	Amp_8q22.3	0.903	1
Amp_6p22.3	Amp_11q22.2	0.903	1
CFHR4	COPZ2	0.904	1
CFHR4	KPTN	0.904	1
CFHR4	PTTG1IP	0.904	1
COPZ2	PROS1	0.904	1
COPZ2	CTCF	0.904	1
COPZ2	DPYS	0.904	1
COPZ2	MARK2	0.904	1
COPZ2	MBD1	0.904	1
COPZ2	PPARG	0.904	1
COPZ2	PPP4R1	0.904	1
COPZ2	USP28	0.904	1
COPZ2	Del_Xp11.3	0.904	1
CSMD3	LETMD1	0.904	1
CSMD3	SNRPB	0.904	1
ELF3	5p-Amp	0.904	1
EP300	Del_4q34.2	0.904	1
ERBB3	18q-Del	0.904	1
HORMAD1	8p-Del	0.904	1
HRAS	20p-Amp	0.904	1
KPTN	PROS1	0.904	1
KPTN	CTCF	0.904	1
KPTN	DPYS	0.904	1
KPTN	MARK2	0.904	1
KPTN	PPARG	0.904	1
KPTN	PPP4R1	0.904	1
KPTN	USP28	0.904	1
KPTN	Del_Xp11.3	0.904	1
NF2	8p-Del	0.904	1
PIGS	Amp_1q21.3	0.904	1
PROS1	PTTG1IP	0.904	1
PTTG1IP	DPYS	0.904	1
PTTG1IP	MARK2	0.904	1
PTTG1IP	MBD1	0.904	1
PTTG1IP	PPARG	0.904	1
PTTG1IP	PPP4R1	0.904	1
PTTG1IP	USP28	0.904	1
PTTG1IP	Del_Xp11.3	0.904	1
RXRA	Amp_11q13.3	0.904	1
ATAD5	Del_15q13.1	0.904	1
DENND5B	FAT1	0.904	1
RIPK4	20p-Amp	0.904	1
SLC9A4	Del_22q13.32	0.904	1
SSH3	5p-Amp	0.904	1
TXNIP	5p-Amp	0.904	1
ZBTB47	8p-Del	0.904	1
CNOT3	8p-Del	0.904	1
CUL1	20p-Amp	0.904	1
UNC93B1	8p-Del	0.904	1
20q-Amp	15q-Del	0.904	1
20q-Amp	Del_15q13.1	0.904	1
3p-Amp	Del_22q13.32	0.904	1
3q-Amp	Del_18q23	0.904	1
8q-Amp	6q-Del	0.904	1
15q-Del	Del_11q23.3	0.904	1
22q-Del	Amp_3q26.33	0.904	1
6q-Del	Amp_16p13.2	0.904	1
Amp_6q21	Del_17p12	0.904	1
Amp_16p13.2	Del_15q13.1	0.904	1
Del_4q22.1	Del_9p23	0.904	1
C3orf70	CDKN2A	0.905	1
C3orf70	RHOB	0.905	1
CDKN2A	ZNF626	0.905	1
CDKN2A	3p-Amp	0.905	1
CNNM4	DIAPH2	0.905	1
CNNM4	TRERF1	0.905	1
CNNM4	CNOT1	0.905	1
CNNM4	FAM47C	0.905	1
CTNNB1	NDC80	0.905	1
CTNNB1	RARG	0.905	1
CTNNB1	19q-Amp	0.905	1
DIAPH2	GPS2	0.905	1
FOXA1	NDC80	0.905	1
FOXA1	Amp_4q13.3	0.905	1
FOXQ1	ZNF180	0.905	1
FOXQ1	NAA15	0.905	1
FOXQ1	19q-Amp	0.905	1
FOXQ1	Del_7q36.3	0.905	1
GPR50	RPTN	0.905	1
GPR50	NDC80	0.905	1
GPR50	Amp_4q13.3	0.905	1
GPS2	CPD	0.905	1
GPS2	RBM10	0.905	1
KDM6A	NEK11	0.905	1
KDM6A	PPARG	0.905	1
KDM6A	PPP4R1	0.905	1
KDM6A	DNAH6	0.905	1
KRAS	NDC80	0.905	1
NF1	TSC1	0.905	1
NF1	Del_13q14.2	0.905	1
NFE2L3	RPTN	0.905	1
NFE2L3	NAA15	0.905	1
NFE2L3	RARG	0.905	1
NFE2L3	Del_7q36.3	0.905	1
PTEN	RPTN	0.905	1
PTEN	DDX3X	0.905	1
PTEN	NAA15	0.905	1
PTEN	19q-Amp	0.905	1
PTEN	Amp_4q13.3	0.905	1
PTEN	Del_7q36.3	0.905	1
RHOB	RIPK4	0.905	1
RPTN	CASP8	0.905	1
RPTN	DCDC1	0.905	1
RPTN	IKZF2	0.905	1
RPTN	WAC	0.905	1
RPTN	ZNF750	0.905	1
RPTN	CDH1	0.905	1
RPTN	EPS8	0.905	1
RPTN	1q-Amp	0.905	1
RUNX1	ZNF180	0.905	1
RUNX1	NAA15	0.905	1
RUNX1	RARG	0.905	1
SF1	Del_2q37.1	0.905	1
SF3B1	Amp_10p14	0.905	1
TSC1	18q-Del	0.905	1
ZNF180	WAC	0.905	1
ZNF180	ZNF750	0.905	1
ZNF180	BAP1	0.905	1
ZNF511	CPD	0.905	1
ZNF511	SF3B3	0.905	1
ZNF511	CNOT1	0.905	1
ZNF511	FAM47C	0.905	1
CASP8	DDX3X	0.905	1
CASP8	NAA15	0.905	1
CASP8	Del_7q36.3	0.905	1
DCDC1	NDC80	0.905	1
DCDC1	Amp_4q13.3	0.905	1
DDX3X	BAP1	0.905	1
DDX3X	CDH1	0.905	1
DDX3X	EPS8	0.905	1
DDX3X	1q-Amp	0.905	1
DDX3X	Del_1p36.11	0.905	1
DLX6	Amp_12q15	0.905	1
DLX6	Amp_13q22.1	0.905	1
DLX6	Del_16q23.1	0.905	1
EXOSC10	NAA15	0.905	1
EXOSC10	RARG	0.905	1
EXOSC10	Del_7q36.3	0.905	1
IKZF2	NAA15	0.905	1
IKZF2	19q-Amp	0.905	1
NAA15	THRAP3	0.905	1
NAA15	WAC	0.905	1
NAA15	ZNF750	0.905	1
NAA15	1q-Amp	0.905	1
NAA15	Del_1p36.11	0.905	1
NDC80	WAC	0.905	1
NKX2-2	CNOT1	0.905	1
NKX2-2	Del_2q37.1	0.905	1
RARG	WAC	0.905	1
RARG	EPS8	0.905	1
RBM10	TFG	0.905	1
TFG	TRERF1	0.905	1
THRAP3	Amp_4q13.3	0.905	1
WAC	Amp_4q13.3	0.905	1
ZNF750	Amp_4q13.3	0.905	1
BAP1	19q-Amp	0.905	1
BAP1	Amp_4q13.3	0.905	1
BAP1	Del_7q36.3	0.905	1
EPS8	19q-Amp	0.905	1
EPS8	Amp_4q13.3	0.905	1
FUT5	Amp_12q15	0.905	1
FUT5	Amp_13q22.1	0.905	1
GNA13	Del_18q23	0.905	1
ZNF185	Amp_12q15	0.905	1
20p-Amp	11p-Del	0.905	1
11q-Del	Del_13q14.2	0.905	1
17p-Del	Del_22q13.32	0.905	1
5q-Del	Del_13q14.2	0.905	1
Amp_8p11.21	Amp_20q11.21	0.905	1
Amp_17q23.3	Del_9p21.3	0.905	1
ATM	Amp_17q12	0.906	1
CDKN2A	ERCC2	0.906	1
CFHR4	GTF2I	0.906	1
CFHR4	ITGA4	0.906	1
CFHR4	PPARGC1A	0.906	1
FOXA1	Del_2q34	0.906	1
FOXQ1	Del_2q34	0.906	1
GTF2I	MARK2	0.906	1
GTF2I	MBD1	0.906	1
GTF2I	Del_Xp11.3	0.906	1
HORMAD1	EPHA2	0.906	1
HORMAD1	OGDH	0.906	1
HORMAD1	Amp_4p16.3	0.906	1
IDH1	20q-Amp	0.906	1
KLF5	Amp_13q22.1	0.906	1
KLF5	Del_6p25.3	0.906	1
NF2	HFM1	0.906	1
NF2	KDM5A	0.906	1
NF2	NCOA1	0.906	1
PIGS	FAT1	0.906	1
PIGS	Del_11q23.3	0.906	1
POTEG	20q-Amp	0.906	1
PROS1	ITGA4	0.906	1
PROS1	SSH3	0.906	1
PROS1	DNAH6	0.906	1
RB1	ARID1B	0.906	1
TP53	7p-Amp	0.906	1
ZBTB7B	EPHA2	0.906	1
ZBTB7B	OGDH	0.906	1
ZNF486	FAT1	0.906	1
ZNF486	20q-Amp	0.906	1
CPD	CNOT1	0.906	1
CTCF	PPARGC1A	0.906	1
CTCF	SSH3	0.906	1
CTCF	TXNIP	0.906	1
DENND5B	Del_5q12.1	0.906	1
EPHA2	PSMC6	0.906	1
EPHA2	CNOT3	0.906	1
EXOSC10	Del_2q34	0.906	1
HFM1	PSMC6	0.906	1
HSP90AA1	RBM26	0.906	1
HSP90AA1	6q-Del	0.906	1
HSP90AA1	Del_15q13.1	0.906	1
ITGA4	PPP4R1	0.906	1
MBD1	PPARGC1A	0.906	1
NAA15	Amp_10p14	0.906	1
NCOA1	STK32B	0.906	1
NCOA1	CNOT3	0.906	1
PARD3	Amp_12q15	0.906	1
PARD3	Del_6p25.3	0.906	1
PPARG	PPARGC1A	0.906	1
PPARG	TXNIP	0.906	1
PPARGC1A	Del_Xp11.3	0.906	1
PPP4R1	SSH3	0.906	1
PPP4R1	DNAH6	0.906	1
RARG	Amp_10p14	0.906	1
RBM10	CNOT1	0.906	1
RBM26	Del_12p13.1	0.906	1
SSH3	USP28	0.906	1
STK32B	Amp_4p16.3	0.906	1
THRAP3	Del_2q34	0.906	1
TRERF1	CNOT1	0.906	1
TRERF1	Amp_1q23.3	0.906	1
FUS	20q-Amp	0.906	1
TMCO4	Del_4q22.1	0.906	1
1q-Amp	Del_2q34	0.906	1
3q-Amp	Del_12p13.1	0.906	1
5p-Amp	Del_2q37.1	0.906	1
7p-Amp	Amp_13q22.1	0.906	1
7q-Amp	Del_12p13.1	0.906	1
15q-Del	9q-Del	0.906	1
Del_4q22.1	Del_Xq21.33	0.906	1
BTG2	RHOB	0.907	1
C12orf43	CDKN2A	0.907	1
C12orf43	RHOB	0.907	1
CDKN1A	PLCXD3	0.907	1
CDKN1A	AGR3	0.907	1
CDKN1A	ADC	0.907	1
CDKN2A	HIST1H2AG	0.907	1
CDKN2A	NHLRC1	0.907	1
CDKN2A	IL10RB	0.907	1
CDKN2A	LETMD1	0.907	1
CDKN2A	4p-Del	0.907	1
NF1	NRAS	0.907	1
NF1	HLA-A	0.907	1
NF1	UNC93B1	0.907	1
NRAS	Del_5q12.1	0.907	1
PLCXD3	11q-Del	0.907	1
PLCXD3	5q-Del	0.907	1
PLCXD3	Amp_3p25.2	0.907	1
PROS1	Amp_19q13.43	0.907	1
RHOB	LETMD1	0.907	1
RHOB	SNRPB	0.907	1
RHOB	TAF11	0.907	1
RHOB	SCARF2	0.907	1
RHOB	19p-Del	0.907	1
RHOB	4p-Del	0.907	1
TP53	3q-Amp	0.907	1
TP53	10q-Del	0.907	1
AGR3	11q-Del	0.907	1
AGR3	5q-Del	0.907	1
AGR3	Amp_3p25.2	0.907	1
ARID2	8p-Del	0.907	1
GLTP	9q-Del	0.907	1
RBP2	Del_19p13.3	0.907	1
USP28	Amp_19q13.43	0.907	1
ZBTB47	Del_5q12.1	0.907	1
ADC	11q-Del	0.907	1
ADC	Del_19p13.3	0.907	1
DAZAP1	11q-Del	0.907	1
HLA-A	9q-Del	0.907	1
UNC93B1	Del_5q12.1	0.907	1
Amp_5p15.33	Del_2q37.1	0.907	1
Amp_19q13.43	Del_Xp11.3	0.907	1
ASXL2	SPTAN1	0.908	1
BTG2	STAG2	0.908	1
BTG2	Del_16p13.3	0.908	1
CREBBP	RPTN	0.908	1
CREBBP	ZNF180	0.908	1
CREBBP	NAA15	0.908	1
ERBB2	Del_4q34.2	0.908	1
ERBB3	MYO16	0.908	1
FGFR3	SCARF2	0.908	1
FGFR3	19p-Del	0.908	1
GTF2I	SPTAN1	0.908	1
HIST1H2AG	Amp_8p11.23	0.908	1
IDH1	PARD3	0.908	1
IDH1	ARID1B	0.908	1
IDH1	Amp_6p22.3	0.908	1
KLF5	PIGS	0.908	1
KLF5	POTEG	0.908	1
KLF5	SARNP	0.908	1
KLF5	EPHA2	0.908	1
KLF5	OR10Z1	0.908	1
KLF5	UGP2	0.908	1
PIGS	ARID1B	0.908	1
PIGS	7p-Amp	0.908	1
POTEG	PARD3	0.908	1
POTEG	4q-Del	0.908	1
PSIP1	Del_19p13.3	0.908	1
SARNP	ARID1B	0.908	1
STAG2	IL10RB	0.908	1
STAG2	LETMD1	0.908	1
STAG2	19p-Del	0.908	1
TBC1D12	RBM10	0.908	1
TBC1D12	SF3B3	0.908	1
TGIF2LX	Del_16p13.3	0.908	1
TSC1	Del_9p23	0.908	1
ZNF180	Del_6q27	0.908	1
ZNF180	Del_11q25	0.908	1
ZNF486	PARD3	0.908	1
ZNF486	7p-Amp	0.908	1
ZNF486	Amp_6p22.3	0.908	1
CCNE2	Amp_8p11.23	0.908	1
DLX6	Del_17p12	0.908	1
HFM1	PARD3	0.908	1
IL10RB	Del_16p13.3	0.908	1
ITGA4	SPTAN1	0.908	1
LETMD1	Del_16p13.3	0.908	1
NAA15	Del_11q25	0.908	1
NCOA1	PARD3	0.908	1
NDC80	Amp_7p21.1	0.908	1
OR10Z1	4q-Del	0.908	1
PARD3	OGDH	0.908	1
PHLDA3	Del_16p13.3	0.908	1
RBM10	Del_11q25	0.908	1
RBM26	11q-Del	0.908	1
RBM26	5q-Del	0.908	1
SNRPB	Amp_8p11.23	0.908	1
TRERF1	Amp_7p21.1	0.908	1
TRERF1	Del_6q27	0.908	1
TRERF1	Del_11q25	0.908	1
UGP2	4q-Del	0.908	1
UGP2	Amp_6p22.3	0.908	1
DNAH6	SPTAN1	0.908	1
FUS	4q-Del	0.908	1
FUT5	Del_17p12	0.908	1
19q-Amp	Del_6q27	0.908	1
19q-Amp	Del_11q25	0.908	1
7q-Amp	5q-Del	0.908	1
19p-Del	Amp_8p11.23	0.908	1
Amp_1q21.3	Amp_8p11.23	0.908	1
Amp_7p11.2	Amp_17q12	0.908	1
Amp_10p14	Del_6p25.3	0.908	1
ARID1A	Del_2q34	0.909	1
CDKN1A	Del_2q37.1	0.909	1
FOXA1	Del_17p12	0.909	1
HORMAD1	9q-Del	0.909	1
HORMAD1	Del_5q12.1	0.909	1
KDM6A	SF1	0.909	1
RPTN	Amp_1p34.2	0.909	1
SF3B1	ZFP36L1	0.909	1
SF3B1	Amp_1p34.2	0.909	1
ZFP36L1	Del_7q36.3	0.909	1
ARID2	DDX3X	0.909	1
CDKN2AIPNL	Amp_8q22.3	0.909	1
DCDC1	Del_17p12	0.909	1
DENND5B	Del_8p21.3	0.909	1
NAA15	Amp_1p34.2	0.909	1
STK32B	Del_5q12.1	0.909	1
WAC	Del_17p12	0.909	1
CDH1	Del_17p12	0.909	1
FUT5	Del_22q13.32	0.909	1
ZNF185	20p-Amp	0.909	1
ZNF773	Del_5q12.1	0.909	1
15q-Del	Amp_5p15.33	0.909	1
16p-Del	Amp_20q11.21	0.909	1
9q-Del	Amp_1q23.3	0.909	1
Amp_1p34.2	Amp_11q22.2	0.909	1
Amp_1p34.2	Del_7q36.3	0.909	1
Amp_8q22.3	Del_2q37.1	0.909	1
C3orf70	Del_1q32.1	0.91	1
C3orf70	Del_Xq21.33	0.91	1
CNNM4	Amp_7p11.2	0.91	1
COPZ2	Del_2q37.1	0.91	1
CTNNB1	Amp_16p13.2	0.91	1
ELF3	ERBB2	0.91	1
EP300	Amp_7p21.1	0.91	1
ERBB3	SLC9A4	0.91	1
ERBB3	3p-Amp	0.91	1
ERBB3	Amp_16p13.2	0.91	1
FBXW7	NFE2L3	0.91	1
FBXW7	EXOSC10	0.91	1
FBXW7	THRAP3	0.91	1
FBXW7	WAC	0.91	1
FBXW7	ZNF750	0.91	1
FBXW7	1q-Amp	0.91	1
FOXQ1	MED13	0.91	1
GPR50	ATAD5	0.91	1
GPR50	MED13	0.91	1
GPS2	Amp_7p11.2	0.91	1
HIST1H3B	ZFP36L2	0.91	1
HIST1H3B	ACTB	0.91	1
HIST1H3B	CUL1	0.91	1
HRAS	17q-Amp	0.91	1
IDH1	Amp_8p11.21	0.91	1
IDH1	Del_2q22.1	0.91	1
KRAS	ATAD5	0.91	1
METTL3	RXRA	0.91	1
METTL3	MYO16	0.91	1
NFE2L3	ATAD5	0.91	1
NFE2L3	MED13	0.91	1
PIGS	Del_2q22.1	0.91	1
PKHD1	RUNX1	0.91	1
PKHD1	CASP8	0.91	1
PKHD1	WAC	0.91	1
PKHD1	EPS8	0.91	1
RHOA	RXRA	0.91	1
RHOA	16p-Del	0.91	1
RHOB	17p-Del	0.91	1
RUNX1	MED13	0.91	1
RUNX1	Amp_16p13.2	0.91	1
SARNP	Del_2q22.1	0.91	1
SF3B1	SHANK1	0.91	1
SHANK1	MYO16	0.91	1
TBC1D12	Amp_11q13.3	0.91	1
TBC1D12	Del_11q25	0.91	1
TP53	Amp_8p11.23	0.91	1
ZFP36L2	TMCO4	0.91	1
ZFP36L2	17q-Amp	0.91	1
ZFP36L2	Del_Xq21.33	0.91	1
ZNF511	SPTAN1	0.91	1
ZNF511	Amp_7p11.2	0.91	1
ACTB	Del_Xq21.33	0.91	1
ATAD5	EXOSC10	0.91	1
ATAD5	THRAP3	0.91	1
ATAD5	BAP1	0.91	1
ATAD5	EPS8	0.91	1
ATAD5	1q-Amp	0.91	1
CASP8	MED13	0.91	1
CASP8	Amp_16p13.2	0.91	1
CPD	11p-Del	0.91	1
DENND5B	Amp_8p11.21	0.91	1
DPYS	Amp_3p25.2	0.91	1
EXOSC10	MED13	0.91	1
IKZF2	MED13	0.91	1
MED13	THRAP3	0.91	1
MED13	ZNF750	0.91	1
MED13	1q-Amp	0.91	1
NKX2-2	SPTAN1	0.91	1
RBM10	11p-Del	0.91	1
RIPK4	GNA13	0.91	1
RIPK4	TMCO4	0.91	1
RIPK4	17q-Amp	0.91	1
SLC9A4	TMCO4	0.91	1
TFG	SPTAN1	0.91	1
TFG	Amp_7p11.2	0.91	1
TRERF1	11p-Del	0.91	1
TRERF1	17p-Del	0.91	1
UGP2	Amp_8p11.21	0.91	1
ZNF626	GNA13	0.91	1
ZNF626	TMCO4	0.91	1
ZNF626	Del_1q32.1	0.91	1
ZNF626	Del_Xq21.33	0.91	1
ZNF750	Amp_16p13.2	0.91	1
BAP1	Amp_16p13.2	0.91	1
CDH1	Amp_16p13.2	0.91	1
CUL1	17q-Amp	0.91	1
3p-Amp	Del_1q32.1	0.91	1
3p-Amp	Del_Xq21.33	0.91	1
Amp_8q22.3	Del_13q14.2	0.91	1
Del_8p23.3	Del_Xq21.33	0.91	1
ASXL2	4p-Del	0.911	1
ATM	MYO16	0.911	1
ATM	Amp_11q13.3	0.911	1
CDKN1A	Del_9p21.3	0.911	1
CFHR4	Amp_11q13.3	0.911	1
COPZ2	HIST1H3B	0.911	1
COPZ2	TMCO4	0.911	1
COPZ2	17q-Amp	0.911	1
COPZ2	Del_Xq21.33	0.911	1
CTNNB1	20q-Amp	0.911	1
GTF2I	14q-Del	0.911	1
GTF2I	Amp_6p22.3	0.911	1
HIST1H3B	PTTG1IP	0.911	1
IDH1	CDKN2AIPNL	0.911	1
KPTN	TMCO4	0.911	1
KPTN	17q-Amp	0.911	1
KPTN	Del_1q32.1	0.911	1
KPTN	Del_Xq21.33	0.911	1
NFE2L3	Del_11q23.3	0.911	1
PIGS	CDKN2AIPNL	0.911	1
PLCXD3	AGR3	0.911	1
PLCXD3	ADC	0.911	1
PLCXD3	DAZAP1	0.911	1
POTEG	CDKN2AIPNL	0.911	1
PROS1	Amp_3q26.33	0.911	1
PROS1	Del_10q23.31	0.911	1
PTTG1IP	GNA13	0.911	1
PTTG1IP	TMCO4	0.911	1
PTTG1IP	17q-Amp	0.911	1
PTTG1IP	Del_1q32.1	0.911	1
PTTG1IP	Del_Xq21.33	0.911	1
RPTN	8p-Del	0.911	1
RXRA	Del_4q34.2	0.911	1
SARNP	CDKN2AIPNL	0.911	1
SF3B1	Del_4q34.2	0.911	1
TBC1D12	CDK12	0.911	1
TP53	Del_2q37.1	0.911	1
ZNF180	Amp_1q23.3	0.911	1
ZNF486	CDKN2AIPNL	0.911	1
AGR3	RBP2	0.911	1
AGR3	DAZAP1	0.911	1
CDK12	ITGA4	0.911	1
CDK12	Del_6q27	0.911	1
CDKN2AIPNL	OR10Z1	0.911	1
CDKN2AIPNL	UGP2	0.911	1
CDKN2AIPNL	FUS	0.911	1
CPD	Del_11p15.5	0.911	1
DCDC1	FAT1	0.911	1
DCDC1	20q-Amp	0.911	1
DDX3X	Amp_1q23.3	0.911	1
FAT1	WAC	0.911	1
FAT1	ZNF750	0.911	1
GLTP	Del_13q14.2	0.911	1
IKZF2	20q-Amp	0.911	1
IKZF2	Del_11q23.3	0.911	1
MARK2	Amp_11q13.3	0.911	1
MBD1	Amp_11q13.3	0.911	1
MYO16	Del_4q34.2	0.911	1
NAA15	Amp_1q23.3	0.911	1
NDC80	8p-Del	0.911	1
NEK11	4p-Del	0.911	1
PPARG	Amp_3q26.33	0.911	1
PPARG	Amp_11q13.3	0.911	1
PPP4R1	Amp_3q26.33	0.911	1
RBP2	ADC	0.911	1
RBP2	DAZAP1	0.911	1
RIPK4	Del_11p15.5	0.911	1
SLC9A4	Del_11p15.5	0.911	1
TXNIP	14q-Del	0.911	1
ZNF626	Del_11p15.5	0.911	1
ADC	DAZAP1	0.911	1
BAP1	20q-Amp	0.911	1
CDH1	20q-Amp	0.911	1
FAM47C	Del_11p15.5	0.911	1
FUS	Amp_20q11.21	0.911	1
UNC93B1	Del_13q14.2	0.911	1
20q-Amp	Del_1p36.11	0.911	1
7q-Amp	Del_13q14.2	0.911	1
11q-Del	Del_10q23.31	0.911	1
15q-Del	Del_13q14.2	0.911	1
4p-Del	Amp_7p21.1	0.911	1
Amp_1q21.3	Del_18q23	0.911	1
Amp_1q23.3	Amp_4q13.3	0.911	1
Del_10q23.31	Del_Xp11.3	0.911	1
ASXL2	TMCO4	0.912	1
ASXL2	Del_1q32.1	0.912	1
PLCXD3	Amp_19q13.43	0.912	1
RHOB	Del_2q37.1	0.912	1
AGR3	Amp_19q13.43	0.912	1
ARID2	HLA-A	0.912	1
ARID2	UNC93B1	0.912	1
MYO16	8p-Del	0.912	1
ZBTB47	Amp_1p34.2	0.912	1
HLA-A	Amp_1p34.2	0.912	1
UNC93B1	Amp_1p34.2	0.912	1
5p-Amp	Amp_8p11.23	0.912	1
Amp_17q12	Del_Xq21.33	0.912	1
ARID1A	Del_8p21.3	0.913	1
ASXL2	CDKN1A	0.913	1
CNNM4	PSIP1	0.913	1
CNNM4	7q-Amp	0.913	1
ERBB3	FUT5	0.913	1
FGFR3	Del_17p12	0.913	1
GPS2	PSIP1	0.913	1
GPS2	RBM26	0.913	1
MIPOL1	PSIP1	0.913	1
MIPOL1	15q-Del	0.913	1
NRAS	FUT5	0.913	1
NRAS	ZNF185	0.913	1
PSIP1	NKX2-2	0.913	1
RB1	4p-Del	0.913	1
RXRA	Amp_8q22.3	0.913	1
SF1	RBM26	0.913	1
SF1	15q-Del	0.913	1
TSC1	PPARG	0.913	1
TSC1	Del_Xp11.3	0.913	1
ZNF511	RBM26	0.913	1
DLX6	GLTP	0.913	1
DLX6	UBA52	0.913	1
DLX6	ZBTB47	0.913	1
DLX6	HLA-A	0.913	1
DLX6	UNC93B1	0.913	1
GLTP	FUT5	0.913	1
GLTP	ZNF185	0.913	1
HSP90AA1	Amp_7p11.2	0.913	1
RBM26	TFG	0.913	1
TFG	7q-Amp	0.913	1
TFG	15q-Del	0.913	1
UBA52	FUT5	0.913	1
UBA52	ZNF185	0.913	1
ZBTB47	FUT5	0.913	1
ZBTB47	ZNF185	0.913	1
FUT5	HLA-A	0.913	1
FUT5	UNC93B1	0.913	1
HLA-A	ZNF185	0.913	1
UNC93B1	ZNF185	0.913	1
20q-Amp	Del_9p21.3	0.913	1
3q-Amp	Amp_8p11.21	0.913	1
11q-Del	Amp_1q21.3	0.913	1
16p-Del	Amp_8q22.3	0.913	1
18q-Del	Amp_1q23.3	0.913	1
9q-Del	Del_2q22.1	0.913	1
Amp_1q21.3	Del_19p13.3	0.913	1
Del_2q22.1	Del_5q12.1	0.913	1
Del_2q22.1	Del_15q13.1	0.913	1
BTG2	Amp_22q12.2	0.914	1
C12orf43	Amp_22q12.2	0.914	1
ELF3	RPTN	0.914	1
ELF3	SF3B3	0.914	1
EP300	GTF2I	0.914	1
HORMAD1	METTL3	0.914	1
HORMAD1	Del_14q24.1	0.914	1
METTL3	NF2	0.914	1
METTL3	ZBTB7B	0.914	1
METTL3	CNOT3	0.914	1
METTL3	ZNF773	0.914	1
METTL3	Amp_6q21	0.914	1
NF2	RHOA	0.914	1
RHOA	CNOT3	0.914	1
SHANK1	PSMC6	0.914	1
SHANK1	STK32B	0.914	1
SHANK1	Del_10q23.31	0.914	1
ZNF180	Del_3p14.2	0.914	1
IL10RB	Amp_22q12.2	0.914	1
ITGA4	17p-Del	0.914	1
ITGA4	Del_6p25.3	0.914	1
NEK11	11p-Del	0.914	1
NEK11	Amp_13q22.1	0.914	1
NEK11	Del_6p25.3	0.914	1
RARG	Amp_17q23.3	0.914	1
RIPK4	Amp_22q12.2	0.914	1
TXNIP	Del_6p25.3	0.914	1
TXNIP	Del_16q23.1	0.914	1
ARID1B	20p-Amp	0.914	1
CNOT1	Amp_17q23.3	0.914	1
CNOT1	Del_3p14.2	0.914	1
DNAH6	Amp_12q15	0.914	1
FAM47C	Del_3p14.2	0.914	1
SCARF2	Amp_22q12.2	0.914	1
20p-Amp	8q-Amp	0.914	1
20p-Amp	Del_11p15.5	0.914	1
8q-Amp	Del_22q13.32	0.914	1
17p-Del	Amp_17q12	0.914	1
19p-Del	Amp_22q12.2	0.914	1
Amp_1p34.2	Del_5q12.1	0.914	1
Amp_13q22.1	Del_2q34	0.914	1
CNNM4	Amp_13q22.1	0.915	1
DIAPH2	TP53	0.915	1
ERBB2	PIGS	0.915	1
ERBB2	SARNP	0.915	1
ERBB2	OR10Z1	0.915	1
ERCC2	METTL3	0.915	1
FBXW7	PKHD1	0.915	1
FBXW7	Amp_16p13.2	0.915	1
IDH1	ASXL1	0.915	1
MIPOL1	Del_16q23.1	0.915	1
PIGS	HSP90AA1	0.915	1
PIGS	Del_8p21.3	0.915	1
POTEG	ASXL1	0.915	1
RB1	Amp_17q12	0.915	1
RHOB	Del_4q22.1	0.915	1
SF1	Del_16q23.1	0.915	1
TP53	SF3B3	0.915	1
ZNF486	ASXL1	0.915	1
ZNF486	Amp_19q12	0.915	1
ZNF486	Del_8p21.3	0.915	1
ZNF511	Del_6p25.3	0.915	1
ATAD5	HSP90AA1	0.915	1
ATAD5	Amp_16p13.2	0.915	1
CDK12	Amp_1q21.3	0.915	1
EPHA2	Amp_17q12	0.915	1
HFM1	Amp_17q12	0.915	1
HSP90AA1	OR10Z1	0.915	1
HSP90AA1	UGP2	0.915	1
HSP90AA1	FUS	0.915	1
MED13	Amp_16p13.2	0.915	1
MED13	Del_12p13.1	0.915	1
NKX2-2	Amp_13q22.1	0.915	1
NKX2-2	Del_6p25.3	0.915	1
OR10Z1	ASXL1	0.915	1
OR10Z1	Del_8p21.3	0.915	1
UGP2	ASXL1	0.915	1
UGP2	Amp_19q12	0.915	1
CUL1	Del_8p21.3	0.915	1
FUS	Del_12p13.1	0.915	1
3p-Amp	Del_8p21.3	0.915	1
ATM	USP28	0.916	1
BTG2	Amp_3q26.33	0.916	1
BTG2	Amp_11q13.3	0.916	1
C3orf70	Del_17p12	0.916	1
CDKN2A	8q-Amp	0.916	1
CFHR4	NDC80	0.916	1
CFHR4	RARG	0.916	1
CFHR4	Amp_4q13.3	0.916	1
COPZ2	9p-Del	0.916	1
CSMD3	ZFP36L2	0.916	1
CSMD3	ACTB	0.916	1
CSMD3	CUL1	0.916	1
CTNNB1	EXOSC10	0.916	1
CTNNB1	IKZF2	0.916	1
CTNNB1	EPS8	0.916	1
CTNNB1	1q-Amp	0.916	1
DIAPH2	DENND5B	0.916	1
FOXA1	NFE2L3	0.916	1
FOXA1	PTEN	0.916	1
FOXA1	THRAP3	0.916	1
FOXA1	BAP1	0.916	1
FOXA1	EPS8	0.916	1
FOXA1	1q-Amp	0.916	1
FOXQ1	GPR50	0.916	1
FOXQ1	KRAS	0.916	1
FOXQ1	NFE2L3	0.916	1
FOXQ1	CASP8	0.916	1
FOXQ1	DCDC1	0.916	1
FOXQ1	THRAP3	0.916	1
FOXQ1	BAP1	0.916	1
FOXQ1	1q-Amp	0.916	1
FOXQ1	Amp_8p11.21	0.916	1
FOXQ1	Del_2q22.1	0.916	1
GPR50	KRAS	0.916	1
GPR50	RUNX1	0.916	1
GPR50	CASP8	0.916	1
GPR50	DCDC1	0.916	1
GPR50	THRAP3	0.916	1
GPR50	WAC	0.916	1
GPR50	ZNF750	0.916	1
GPR50	EPS8	0.916	1
GPR50	Amp_8p11.21	0.916	1
GPR50	Del_2q22.1	0.916	1
HIST1H2AG	Del_10q23.31	0.916	1
KPTN	RB1	0.916	1
KPTN	9p-Del	0.916	1
KRAS	PTEN	0.916	1
KRAS	RUNX1	0.916	1
KRAS	CASP8	0.916	1
KRAS	CDH1	0.916	1
KRAS	1q-Amp	0.916	1
KRAS	Amp_8p11.21	0.916	1
NFE2L3	PTEN	0.916	1
NFE2L3	RUNX1	0.916	1
NFE2L3	IKZF2	0.916	1
NFE2L3	WAC	0.916	1
NFE2L3	ZNF750	0.916	1
NFE2L3	CDH1	0.916	1
NFE2L3	1q-Amp	0.916	1
NFE2L3	Del_1p36.11	0.916	1
NFE2L3	Del_2q22.1	0.916	1
NHLRC1	Del_10q23.31	0.916	1
PROS1	RPTN	0.916	1
PROS1	ZNF180	0.916	1
PROS1	DDX3X	0.916	1
PROS1	NAA15	0.916	1
PROS1	RARG	0.916	1
PROS1	Amp_4q13.3	0.916	1
PROS1	Del_7q36.3	0.916	1
PSIP1	RBM10	0.916	1
PSIP1	TRERF1	0.916	1
PSIP1	CNOT1	0.916	1
PTEN	RB1	0.916	1
PTEN	ZNF750	0.916	1
PTEN	CDH1	0.916	1
PTEN	EPS8	0.916	1
PTEN	Del_1p36.11	0.916	1
PTEN	Del_2q22.1	0.916	1
RB1	TFG	0.916	1
RB1	WAC	0.916	1
RB1	CDH1	0.916	1
RHOB	8q-Amp	0.916	1
RPTN	MARK2	0.916	1
RPTN	MBD1	0.916	1
RPTN	PPP4R1	0.916	1
RPTN	USP28	0.916	1
RUNX1	CASP8	0.916	1
RUNX1	IKZF2	0.916	1
RUNX1	ZNF750	0.916	1
RUNX1	BAP1	0.916	1
RUNX1	1q-Amp	0.916	1
TSC1	ZFP36L1	0.916	1
ZNF180	PPARG	0.916	1
ZNF180	USP28	0.916	1
CASP8	EXOSC10	0.916	1
CASP8	IKZF2	0.916	1
CASP8	BAP1	0.916	1
CASP8	EPS8	0.916	1
CPD	15q-Del	0.916	1
CTCF	Amp_4q13.3	0.916	1
CTCF	Del_7q36.3	0.916	1
DCDC1	IKZF2	0.916	1
DCDC1	THRAP3	0.916	1
DCDC1	WAC	0.916	1
DCDC1	ZNF750	0.916	1
DCDC1	BAP1	0.916	1
DCDC1	CDH1	0.916	1
DDX3X	PPARG	0.916	1
DDX3X	Del_5q12.1	0.916	1
DDX3X	Del_Xp11.3	0.916	1
DENND5B	RBM10	0.916	1
DENND5B	SF3B3	0.916	1
DENND5B	TRERF1	0.916	1
DENND5B	FAM47C	0.916	1
DPYS	NAA15	0.916	1
DPYS	Amp_4q13.3	0.916	1
DPYS	Del_4q34.2	0.916	1
EXOSC10	IKZF2	0.916	1
EXOSC10	THRAP3	0.916	1
EXOSC10	WAC	0.916	1
EXOSC10	BAP1	0.916	1
EXOSC10	EPS8	0.916	1
EXOSC10	Del_2q22.1	0.916	1
IKZF2	THRAP3	0.916	1
IKZF2	WAC	0.916	1
IKZF2	ZNF750	0.916	1
IKZF2	BAP1	0.916	1
IKZF2	EPS8	0.916	1
IKZF2	Amp_8p11.21	0.916	1
IL10RB	Amp_3q26.33	0.916	1
LETMD1	Del_10q23.31	0.916	1
MARK2	NAA15	0.916	1
MARK2	RARG	0.916	1
MARK2	Amp_4q13.3	0.916	1
MARK2	Del_7q36.3	0.916	1
MBD1	RARG	0.916	1
MBD1	Amp_4q13.3	0.916	1
NAA15	PPARG	0.916	1
NAA15	PPP4R1	0.916	1
NAA15	9q-Del	0.916	1
NDC80	USP28	0.916	1
NDC80	9q-Del	0.916	1
PPARG	RARG	0.916	1
PPARG	Amp_4q13.3	0.916	1
PPARG	Del_7q36.3	0.916	1
PPARGC1A	Amp_20q11.21	0.916	1
RBM10	RBM26	0.916	1
RBM10	15q-Del	0.916	1
RBM26	FAM47C	0.916	1
RIPK4	Del_17p12	0.916	1
SNRPB	Del_10q23.31	0.916	1
TAF11	Amp_3q26.33	0.916	1
THRAP3	WAC	0.916	1
THRAP3	1q-Amp	0.916	1
THRAP3	Del_1p36.11	0.916	1
TRERF1	15q-Del	0.916	1
WAC	ZNF750	0.916	1
WAC	BAP1	0.916	1
WAC	EPS8	0.916	1
WAC	1q-Amp	0.916	1
WAC	Amp_8p11.21	0.916	1
WAC	Del_2q22.1	0.916	1
ZNF626	Del_17p12	0.916	1
ZNF750	BAP1	0.916	1
ZNF750	CDH1	0.916	1
ZNF750	Del_1p36.11	0.916	1
ZNF750	Del_2q22.1	0.916	1
BAP1	Del_2q22.1	0.916	1
CNOT1	15q-Del	0.916	1
EPS8	1q-Amp	0.916	1
EPS8	Amp_8p11.21	0.916	1
FAM47C	15q-Del	0.916	1
SCARF2	Amp_11q13.3	0.916	1
19q-Amp	9q-Del	0.916	1
19q-Amp	Del_Xp11.3	0.916	1
20q-Amp	Amp_3p25.2	0.916	1
3q-Amp	Del_14q24.1	0.916	1
10q-Del	Del_14q24.1	0.916	1
18q-Del	Del_16p13.3	0.916	1
8p-Del	Del_6p25.3	0.916	1
Amp_3p25.2	Del_4q22.1	0.916	1
Amp_4q13.3	Del_5q12.1	0.916	1
Amp_4q13.3	Del_Xp11.3	0.916	1
Amp_6p22.3	Amp_8p11.23	0.916	1
Amp_8p11.21	Del_1p36.11	0.916	1
Del_1p36.11	Del_2q22.1	0.916	1
Del_5q12.1	Del_7q36.3	0.916	1
NF1	RUNX1	0.917	1
NF1	IKZF2	0.917	1
NF1	WAC	0.917	1
PIK3CA	Del_12p13.1	0.917	1
PKHD1	FAT1	0.917	1
PLCXD3	TSC1	0.917	1
PTEN	TP53	0.917	1
RUNX1	TP53	0.917	1
RXRA	Del_5q12.1	0.917	1
TP53	CASP8	0.917	1
TP53	WAC	0.917	1
TP53	ZNF750	0.917	1
TP53	BAP1	0.917	1
ZFP36L1	Del_6p25.3	0.917	1
ARID2	Del_6p25.3	0.917	1
EPHA2	ASXL1	0.917	1
FAT1	MED13	0.917	1
RBM26	5p-Amp	0.917	1
ASXL1	Amp_4p16.3	0.917	1
CNOT3	5p-Amp	0.917	1
20q-Amp	Amp_22q12.2	0.917	1
11p-Del	Amp_20q11.21	0.917	1
16p-Del	Del_5q12.1	0.917	1
Amp_1q23.3	Del_Xq21.33	0.917	1
CDKN1A	GNA13	0.918	1
CDKN1A	Del_Xq21.33	0.918	1
COPZ2	NF2	0.918	1
COPZ2	ZBTB7B	0.918	1
COPZ2	STK32B	0.918	1
COPZ2	CNOT3	0.918	1
COPZ2	ZNF773	0.918	1
COPZ2	Amp_6q21	0.918	1
ERCC2	Amp_22q12.2	0.918	1
HORMAD1	KPTN	0.918	1
HORMAD1	PTTG1IP	0.918	1
KPTN	NF2	0.918	1
KPTN	ZBTB7B	0.918	1
KPTN	PSMC6	0.918	1
KPTN	STK32B	0.918	1
KPTN	CNOT3	0.918	1
KPTN	ZNF773	0.918	1
KPTN	Amp_6q21	0.918	1
NF2	PTTG1IP	0.918	1
PTTG1IP	ZBTB7B	0.918	1
PTTG1IP	PSMC6	0.918	1
PTTG1IP	STK32B	0.918	1
PTTG1IP	CNOT3	0.918	1
PTTG1IP	ZNF773	0.918	1
PTTG1IP	Amp_6q21	0.918	1
GNA13	5q-Del	0.918	1
GNA13	Amp_1q21.3	0.918	1
TMCO4	5q-Del	0.918	1
3q-Amp	Del_8p23.3	0.918	1
8q-Amp	Del_8p23.3	0.918	1
5q-Del	Del_Xq21.33	0.918	1
Amp_1q21.3	Del_1q32.1	0.918	1
Amp_5p15.33	Amp_11q13.3	0.918	1
Amp_19q12	Amp_20q11.21	0.918	1
Del_1q32.1	Del_19p13.3	0.918	1
CDKN1A	SPTAN1	0.919	1
CDKN2A	NEK11	0.919	1
CDKN2A	TXNIP	0.919	1
CNNM4	Del_22q13.32	0.919	1
CSMD3	TMCO4	0.919	1
DIAPH2	10q-Del	0.919	1
ERCC2	Del_8p23.3	0.919	1
GPS2	Del_22q13.32	0.919	1
GTF2I	HIST1H3B	0.919	1
HIST1H3B	ITGA4	0.919	1
HIST1H3B	NEK11	0.919	1
KDM6A	GLTP	0.919	1
KDM6A	ZBTB47	0.919	1
KLF5	METTL3	0.919	1
METTL3	PARD3	0.919	1
METTL3	ARID1B	0.919	1
METTL3	4q-Del	0.919	1
METTL3	9p-Del	0.919	1
PIGS	Amp_7p21.1	0.919	1
PIGS	Del_11q25	0.919	1
PLCXD3	Del_2q37.1	0.919	1
RHOA	PARD3	0.919	1
RHOA	ARID1B	0.919	1
RHOA	4q-Del	0.919	1
SARNP	TBC1D12	0.919	1
TSC1	Del_11p15.5	0.919	1
ZNF486	Amp_7p21.1	0.919	1
CDK12	Amp_17q23.3	0.919	1
CTCF	10q-Del	0.919	1
DPYS	3q-Amp	0.919	1
DPYS	6q-Del	0.919	1
ITGA4	TMCO4	0.919	1
ITGA4	Del_Xq21.33	0.919	1
KDM5A	8p-Del	0.919	1
MBD1	6q-Del	0.919	1
NEK11	Del_18q23	0.919	1
NEK11	Del_Xq21.33	0.919	1
NKX2-2	Del_22q13.32	0.919	1
PPARG	3q-Amp	0.919	1
PPARGC1A	GNA13	0.919	1
PPARGC1A	17q-Amp	0.919	1
PPARGC1A	Del_1q32.1	0.919	1
PPARGC1A	Del_Xq21.33	0.919	1
SSH3	TMCO4	0.919	1
SSH3	17q-Amp	0.919	1
SSH3	Del_1q32.1	0.919	1
SSH3	Del_18q23	0.919	1
TRERF1	3q-Amp	0.919	1
TXNIP	GNA13	0.919	1
TXNIP	Del_1q32.1	0.919	1
TXNIP	Del_18q23	0.919	1
TXNIP	Del_Xq21.33	0.919	1
USP28	3q-Amp	0.919	1
USP28	Del_15q13.1	0.919	1
ADC	Del_2q37.1	0.919	1
CNOT1	Del_15q13.1	0.919	1
DNAH6	Del_Xq21.33	0.919	1
SPTAN1	Del_19p13.3	0.919	1
3q-Amp	Del_Xp11.3	0.919	1
10q-Del	Del_Xp11.3	0.919	1
18q-Del	Del_13q14.2	0.919	1
6q-Del	Del_Xp11.3	0.919	1
ATM	METTL3	0.92	1
ATM	LETMD1	0.92	1
ATM	SNRPB	0.92	1
BTG2	SF3B1	0.92	1
C12orf43	RXRA	0.92	1
C12orf43	MYO16	0.92	1
C12orf43	16p-Del	0.92	1
C12orf43	Del_4q34.2	0.92	1
ERBB2	3q-Amp	0.92	1
HIST1H2AG	NFE2L2	0.92	1
HIST1H2AG	MYO16	0.92	1
HIST1H2AG	16p-Del	0.92	1
HIST1H2AG	22q-Del	0.92	1
KLF5	ZFP36L1	0.92	1
KLF5	ARID2	0.92	1
NFE2L2	LETMD1	0.92	1
NFE2L2	SNRPB	0.92	1
NFE2L2	SCARF2	0.92	1
RHOA	Del_4q34.2	0.92	1
RXRA	LETMD1	0.92	1
RXRA	TAF11	0.92	1
RXRA	SCARF2	0.92	1
SF3B1	IL10RB	0.92	1
SF3B1	PHLDA3	0.92	1
SF3B1	TAF11	0.92	1
SF3B1	19p-Del	0.92	1
TSC1	Amp_8p11.23	0.92	1
ARID2	PARD3	0.92	1
ARID2	Del_13q14.2	0.92	1
CCNE2	MYO16	0.92	1
CDK12	5q-Del	0.92	1
CDK12	Del_19p13.3	0.92	1
FAT1	NCOA1	0.92	1
KDM5A	20q-Amp	0.92	1
LETMD1	MYO16	0.92	1
LETMD1	16p-Del	0.92	1
LETMD1	Del_4q34.2	0.92	1
MYO16	TAF11	0.92	1
MYO16	19p-Del	0.92	1
NAA15	Del_13q14.2	0.92	1
NDC80	Del_13q14.2	0.92	1
PARD3	Del_10q23.31	0.92	1
PHLDA3	22q-Del	0.92	1
RARG	Del_13q14.2	0.92	1
SNRPB	Amp_11q22.2	0.92	1
SNRPB	Del_4q34.2	0.92	1
TAF11	Amp_11q22.2	0.92	1
FUT5	Del_14q24.1	0.92	1
SCARF2	16p-Del	0.92	1
3q-Amp	Amp_19q12	0.92	1
11q-Del	4p-Del	0.92	1
16p-Del	19p-Del	0.92	1
19p-Del	Amp_11q22.2	0.92	1
4q-Del	Amp_1p34.2	0.92	1
4q-Del	Amp_3q26.33	0.92	1
4q-Del	Del_10q23.31	0.92	1
Amp_3q26.33	Amp_17q23.3	0.92	1
Amp_7p21.1	Del_3p14.2	0.92	1
Amp_7p11.2	Del_13q14.2	0.92	1
Amp_13q22.1	Del_12p13.1	0.92	1
Del_5q12.1	Del_13q14.2	0.92	1
Del_6p25.3	Del_8p21.3	0.92	1
ATM	ARID2	0.921	1
BTG2	CDKN2AIPNL	0.921	1
BTG2	Del_9p23	0.921	1
C12orf43	CDKN2AIPNL	0.921	1
C3orf70	FGFR3	0.921	1
CNNM4	Amp_4p16.3	0.921	1
EP300	GLTP	0.921	1
EP300	UBA52	0.921	1
ERBB2	DCDC1	0.921	1
ERBB2	THRAP3	0.921	1
ERBB2	ZNF750	0.921	1
ERBB3	7p-Amp	0.921	1
FOXQ1	Amp_19q12	0.921	1
GPS2	NCOA1	0.921	1
HIST1H2AG	CDKN2AIPNL	0.921	1
IDH1	Amp_3p25.2	0.921	1
NHLRC1	CDKN2AIPNL	0.921	1
NHLRC1	Del_9p23	0.921	1
NRAS	11p-Del	0.921	1
PIGS	Amp_3p25.2	0.921	1
PLCXD3	10q-Del	0.921	1
PLCXD3	Del_15q13.1	0.921	1
POTEG	Amp_3p25.2	0.921	1
RUNX1	Amp_19q12	0.921	1
SARNP	Amp_3p25.2	0.921	1
SF1	HFM1	0.921	1
STAG2	RIPK4	0.921	1
STAG2	SLC9A4	0.921	1
STAG2	ZNF626	0.921	1
TGIF2LX	CDKN2AIPNL	0.921	1
ZNF511	EPHA2	0.921	1
ZNF511	OGDH	0.921	1
CDKN2AIPNL	LETMD1	0.921	1
CDKN2AIPNL	SNRPB	0.921	1
CDKN2AIPNL	SCARF2	0.921	1
CDKN2AIPNL	19p-Del	0.921	1
EPHA2	NKX2-2	0.921	1
EXOSC10	Amp_19q12	0.921	1
GLTP	17p-Del	0.921	1
KDM5A	NKX2-2	0.921	1
NCOA1	NKX2-2	0.921	1
NKX2-2	Amp_4p16.3	0.921	1
RBP2	Del_15q13.1	0.921	1
SLC9A4	Amp_8p11.23	0.921	1
TFG	Amp_4p16.3	0.921	1
WAC	Amp_19q12	0.921	1
DAZAP1	3q-Amp	0.921	1
DAZAP1	6q-Del	0.921	1
DAZAP1	Del_15q13.1	0.921	1
HLA-A	17p-Del	0.921	1
SPTAN1	Amp_8p11.21	0.921	1
UNC93B1	17p-Del	0.921	1
17q-Amp	Amp_6p22.3	0.921	1
3p-Amp	Del_16p13.3	0.921	1
8q-Amp	Amp_17q12	0.921	1
Amp_6p22.3	Del_1q32.1	0.921	1
Amp_19q12	Del_1p36.11	0.921	1
C3orf70	NFE2L2	0.922	1
C3orf70	RXRA	0.922	1
C3orf70	Amp_11q22.2	0.922	1
DIAPH2	PIGS	0.922	1
DIAPH2	ZNF486	0.922	1
DIAPH2	UGP2	0.922	1
FGFR3	20q-Amp	0.922	1
HRAS	RXRA	0.922	1
IDH1	SF3B3	0.922	1
IDH1	TRERF1	0.922	1
IDH1	CNOT1	0.922	1
METTL3	Del_4q22.1	0.922	1
NFE2L2	CUL1	0.922	1
PIGS	CPD	0.922	1
PIGS	CNOT1	0.922	1
PIGS	FAM47C	0.922	1
POTEG	CPD	0.922	1
POTEG	RBM10	0.922	1
POTEG	SF3B3	0.922	1
POTEG	CNOT1	0.922	1
POTEG	FAM47C	0.922	1
PSIP1	Del_17p12	0.922	1
RXRA	ACTB	0.922	1
RXRA	ZNF626	0.922	1
RXRA	3p-Amp	0.922	1
SARNP	TRERF1	0.922	1
SF3B1	RIPK4	0.922	1
SF3B1	CUL1	0.922	1
SHANK1	Del_4q22.1	0.922	1
ZFP36L2	Amp_11q22.2	0.922	1
ZNF486	SF3B3	0.922	1
ZNF486	FAM47C	0.922	1
ACTB	16p-Del	0.922	1
CPD	OR10Z1	0.922	1
EPHA2	11q-Del	0.922	1
EPHA2	5q-Del	0.922	1
EPHA2	Del_19p13.3	0.922	1
KDM5A	11q-Del	0.922	1
MED13	Del_8p21.3	0.922	1
NCOA1	5q-Del	0.922	1
NCOA1	Del_19p13.3	0.922	1
OR10Z1	CNOT1	0.922	1
PARD3	Amp_6p22.3	0.922	1
SF3B3	UGP2	0.922	1
SLC9A4	22q-Del	0.922	1
UGP2	CNOT1	0.922	1
ADC	Amp_8q22.3	0.922	1
CNOT1	FUS	0.922	1
OGDH	Amp_1q21.3	0.922	1
3p-Amp	22q-Del	0.922	1
3p-Amp	Amp_11q22.2	0.922	1
11q-Del	Del_19p13.3	0.922	1
Amp_1q21.3	Amp_4p16.3	0.922	1
Amp_4p16.3	Del_19p13.3	0.922	1
Amp_7p11.2	Del_8p23.3	0.922	1
Amp_13q22.1	Del_11q23.3	0.922	1
ARID1A	Amp_12q15	0.923	1
C3orf70	HORMAD1	0.923	1
C3orf70	NF2	0.923	1
C3orf70	STK32B	0.923	1
C3orf70	ZNF773	0.923	1
C3orf70	Del_14q24.1	0.923	1
FOXQ1	Del_8p21.3	0.923	1
HIST1H3B	Amp_8p11.23	0.923	1
HORMAD1	ZFP36L2	0.923	1
HORMAD1	ACTB	0.923	1
HORMAD1	SLC9A4	0.923	1
HORMAD1	ZNF626	0.923	1
HORMAD1	CUL1	0.923	1
HRAS	STK32B	0.923	1
IDH1	Amp_17q23.3	0.923	1
KPTN	Amp_10p14	0.923	1
NF2	SLC9A4	0.923	1
NF2	CUL1	0.923	1
NRAS	CDK12	0.923	1
NRAS	14q-Del	0.923	1
PIGS	Amp_17q23.3	0.923	1
PIGS	Del_3p14.2	0.923	1
SARNP	Amp_17q23.3	0.923	1
STAG2	Del_Xq21.33	0.923	1
ZBTB7B	ZFP36L2	0.923	1
ZBTB7B	SLC9A4	0.923	1
ZFP36L2	PSMC6	0.923	1
ZFP36L2	STK32B	0.923	1
ZFP36L2	ZNF773	0.923	1
ACTB	PSMC6	0.923	1
ACTB	CNOT3	0.923	1
ACTB	Amp_6q21	0.923	1
CDK12	ZBTB47	0.923	1
GLTP	14q-Del	0.923	1
RIPK4	STK32B	0.923	1
RIPK4	Amp_6q21	0.923	1
SLC9A4	STK32B	0.923	1
UBA52	4p-Del	0.923	1
UGP2	Del_3p14.2	0.923	1
ZNF626	ZNF773	0.923	1
ZNF626	Amp_6q21	0.923	1
ZNF626	Del_14q24.1	0.923	1
CNOT3	CUL1	0.923	1
CUL1	ZNF773	0.923	1
CUL1	18q-Del	0.923	1
CUL1	Amp_6q21	0.923	1
FUS	Amp_17q23.3	0.923	1
HLA-A	14q-Del	0.923	1
HLA-A	4p-Del	0.923	1
TMCO4	Del_16p13.3	0.923	1
UNC93B1	14q-Del	0.923	1
3p-Amp	18q-Del	0.923	1
15q-Del	Del_9p21.3	0.923	1
15q-Del	Del_11q25	0.923	1
18q-Del	Amp_11q22.2	0.923	1
Amp_8p11.23	Del_Xq21.33	0.923	1
Amp_19q13.43	Del_10q23.31	0.923	1
Del_16p13.3	Del_Xq21.33	0.923	1
CNNM4	ERBB3	0.924	1
CTNNB1	ZFP36L1	0.924	1
CTNNB1	ARID2	0.924	1
ERBB3	TFG	0.924	1
ERCC2	FUT5	0.924	1
FOXA1	ZFP36L1	0.924	1
FOXA1	ARID2	0.924	1
FOXQ1	ARID2	0.924	1
FOXQ1	Del_9p21.3	0.924	1
GPR50	Amp_1p34.2	0.924	1
KDM6A	Amp_19q13.43	0.924	1
KRAS	Amp_1p34.2	0.924	1
NF1	MED13	0.924	1
NFE2L3	ZFP36L1	0.924	1
NFE2L3	ARID2	0.924	1
NRAS	Del_18q23	0.924	1
PTEN	Amp_1p34.2	0.924	1
RB1	HSP90AA1	0.924	1
RHOB	TBC1D12	0.924	1
RHOB	Amp_7p21.1	0.924	1
RPTN	4p-Del	0.924	1
ZFP36L1	CASP8	0.924	1
ZFP36L1	BAP1	0.924	1
ZFP36L1	EPS8	0.924	1
ZFP36L1	Amp_8q22.3	0.924	1
ARID2	DCDC1	0.924	1
CASP8	Amp_1p34.2	0.924	1
CDK12	DDX3X	0.924	1
CDK12	NDC80	0.924	1
CDK12	19q-Amp	0.924	1
CDKN2AIPNL	Del_8p21.3	0.924	1
DCDC1	Amp_1p34.2	0.924	1
DDX3X	14q-Del	0.924	1
HSP90AA1	9p-Del	0.924	1
MED13	Del_2q22.1	0.924	1
RARG	14q-Del	0.924	1
WAC	Amp_1p34.2	0.924	1
ZNF750	Amp_1p34.2	0.924	1
BAP1	Amp_1p34.2	0.924	1
EPS8	Amp_1p34.2	0.924	1
19q-Amp	14q-Del	0.924	1
4p-Del	Del_7q36.3	0.924	1
9p-Del	Del_12p13.1	0.924	1
Amp_1p34.2	Amp_8q22.3	0.924	1
Amp_1p34.2	Del_1p36.11	0.924	1
Amp_1q23.3	Amp_5p15.33	0.924	1
Del_8p23.3	Del_11q25	0.924	1
ASXL2	Del_22q13.32	0.925	1
CNNM4	PTTG1IP	0.925	1
COPZ2	GPS2	0.925	1
COPZ2	MIPOL1	0.925	1
COPZ2	SF1	0.925	1
COPZ2	ZNF511	0.925	1
COPZ2	NKX2-2	0.925	1
COPZ2	TFG	0.925	1
COPZ2	8p-Del	0.925	1
EP300	TP53	0.925	1
EP300	STK32B	0.925	1
ERCC2	3q-Amp	0.925	1
GPS2	KPTN	0.925	1
GPS2	PTTG1IP	0.925	1
KPTN	MIPOL1	0.925	1
KPTN	SF1	0.925	1
KPTN	ZNF511	0.925	1
KPTN	NKX2-2	0.925	1
KPTN	TFG	0.925	1
NF2	Del_4q22.1	0.925	1
PLCXD3	DLX6	0.925	1
PLCXD3	FUT5	0.925	1
PLCXD3	ZNF185	0.925	1
PTTG1IP	SF1	0.925	1
PTTG1IP	ZNF511	0.925	1
PTTG1IP	NKX2-2	0.925	1
PTTG1IP	TFG	0.925	1
RPTN	SPTAN1	0.925	1
RPTN	5p-Amp	0.925	1
TP53	KDM5A	0.925	1
ZFP36L1	20p-Amp	0.925	1
AGR3	DLX6	0.925	1
AGR3	ZNF185	0.925	1
CDKN2AIPNL	Amp_19q12	0.925	1
DLX6	RBP2	0.925	1
DLX6	DAZAP1	0.925	1
NDC80	5p-Amp	0.925	1
RBP2	FUT5	0.925	1
RBP2	ZNF185	0.925	1
STK32B	17p-Del	0.925	1
STK32B	Del_4q22.1	0.925	1
UGP2	Del_11p15.5	0.925	1
ADC	FUT5	0.925	1
ADC	ZNF185	0.925	1
DAZAP1	FUT5	0.925	1
17q-Amp	Amp_20q11.21	0.925	1
20q-Amp	Del_8p23.3	0.925	1
7q-Amp	Amp_3p25.2	0.925	1
14q-Del	Amp_20q11.21	0.925	1
ATM	ARID1B	0.926	1
BTG2	PIK3CA	0.926	1
C12orf43	PIK3CA	0.926	1
C12orf43	ARID1B	0.926	1
CFHR4	FOXQ1	0.926	1
CFHR4	KRAS	0.926	1
CFHR4	CASP8	0.926	1
CFHR4	DCDC1	0.926	1
CFHR4	EXOSC10	0.926	1
CFHR4	THRAP3	0.926	1
CFHR4	CDH1	0.926	1
CFHR4	1q-Amp	0.926	1
CREBBP	GPR50	0.926	1
CREBBP	PTEN	0.926	1
CREBBP	CASP8	0.926	1
CREBBP	DCDC1	0.926	1
CREBBP	IKZF2	0.926	1
CREBBP	CDH1	0.926	1
CREBBP	1q-Amp	0.926	1
CTNNB1	PROS1	0.926	1
CTNNB1	MARK2	0.926	1
CTNNB1	PPARG	0.926	1
DIAPH2	Del_2q37.1	0.926	1
EP300	Del_2q34	0.926	1
ERBB3	PPARGC1A	0.926	1
FBXW7	RBP2	0.926	1
FBXW7	ADC	0.926	1
FBXW7	DAZAP1	0.926	1
FBXW7	Del_Xp11.3	0.926	1
FOXA1	TBC1D12	0.926	1
FOXA1	CTCF	0.926	1
FOXA1	USP28	0.926	1
FOXA1	Del_6q27	0.926	1
FOXA1	Del_11q25	0.926	1
FOXQ1	CTCF	0.926	1
FOXQ1	DPYS	0.926	1
FOXQ1	MARK2	0.926	1
FOXQ1	MBD1	0.926	1
FOXQ1	PPP4R1	0.926	1
FOXQ1	Del_6q27	0.926	1
FOXQ1	Del_Xp11.3	0.926	1
GPR50	DPYS	0.926	1
GPR50	Amp_7p21.1	0.926	1
GPR50	Del_Xp11.3	0.926	1
HIST1H2AG	PIK3CA	0.926	1
HIST1H2AG	7p-Amp	0.926	1
HIST1H2AG	4q-Del	0.926	1
KLF5	CCNE2	0.926	1
KLF5	LETMD1	0.926	1
KLF5	SNRPB	0.926	1
KLF5	SCARF2	0.926	1
KLF5	19p-Del	0.926	1
KRAS	PROS1	0.926	1
KRAS	USP28	0.926	1
NFE2L3	PROS1	0.926	1
NFE2L3	CTCF	0.926	1
NFE2L3	MARK2	0.926	1
NFE2L3	PPP4R1	0.926	1
NFE2L3	Del_Xp11.3	0.926	1
NHLRC1	PARD3	0.926	1
NHLRC1	ARID1B	0.926	1
PIK3CA	SHANK1	0.926	1
PIK3CA	TGIF2LX	0.926	1
PIK3CA	CCNE2	0.926	1
PIK3CA	IL10RB	0.926	1
PKHD1	PLCXD3	0.926	1
PKHD1	AGR3	0.926	1
PKHD1	CPD	0.926	1
PKHD1	RBP2	0.926	1
PKHD1	USP28	0.926	1
PKHD1	ADC	0.926	1
PKHD1	FAM47C	0.926	1
PLCXD3	MED13	0.926	1
PROS1	PTEN	0.926	1
PROS1	ATAD5	0.926	1
PROS1	THRAP3	0.926	1
PROS1	ZNF750	0.926	1
PROS1	EPS8	0.926	1
PROS1	Del_1p36.11	0.926	1
PSIP1	DENND5B	0.926	1
PSIP1	RBM26	0.926	1
PTEN	Amp_7p21.1	0.926	1
PTEN	Del_6q27	0.926	1
RUNX1	CTCF	0.926	1
RUNX1	DPYS	0.926	1
RUNX1	MARK2	0.926	1
RUNX1	MBD1	0.926	1
RUNX1	PPARG	0.926	1
RUNX1	USP28	0.926	1
TBC1D12	CASP8	0.926	1
TBC1D12	IKZF2	0.926	1
TBC1D12	THRAP3	0.926	1
TBC1D12	CDH1	0.926	1
TBC1D12	1q-Amp	0.926	1
TBC1D12	Del_9p23	0.926	1
TGIF2LX	PARD3	0.926	1
TGIF2LX	ARID1B	0.926	1
TGIF2LX	7p-Amp	0.926	1
TGIF2LX	4q-Del	0.926	1
ATAD5	CPD	0.926	1
ATAD5	CTCF	0.926	1
ATAD5	RBM10	0.926	1
ATAD5	TRERF1	0.926	1
ATAD5	ADC	0.926	1
CASP8	CTCF	0.926	1
CASP8	MBD1	0.926	1
CASP8	PPP4R1	0.926	1
CASP8	USP28	0.926	1
CCNE2	ARID1B	0.926	1
CCNE2	4q-Del	0.926	1
CPD	HFM1	0.926	1
CPD	Del_2q37.1	0.926	1
CTCF	IKZF2	0.926	1
CTCF	MED13	0.926	1
CTCF	WAC	0.926	1
CTCF	CDH1	0.926	1
CTCF	1q-Amp	0.926	1
DCDC1	DPYS	0.926	1
DCDC1	MARK2	0.926	1
DCDC1	PPARG	0.926	1
DCDC1	PPP4R1	0.926	1
DCDC1	Del_Xp11.3	0.926	1
DPYS	THRAP3	0.926	1
DPYS	EPS8	0.926	1
DPYS	1q-Amp	0.926	1
EPHA2	Amp_8p11.21	0.926	1
EXOSC10	MARK2	0.926	1
EXOSC10	USP28	0.926	1
HFM1	CNOT1	0.926	1
HFM1	Amp_8p11.21	0.926	1
IKZF2	MARK2	0.926	1
IKZF2	MBD1	0.926	1
IKZF2	PPARG	0.926	1
IKZF2	Del_Xp11.3	0.926	1
IL10RB	PARD3	0.926	1
IL10RB	ARID1B	0.926	1
KDM5A	RBM10	0.926	1
LETMD1	PARD3	0.926	1
LETMD1	4q-Del	0.926	1
MARK2	MED13	0.926	1
MARK2	THRAP3	0.926	1
MARK2	WAC	0.926	1
MARK2	ZNF750	0.926	1
MBD1	BAP1	0.926	1
MBD1	CDH1	0.926	1
MBD1	EPS8	0.926	1
MBD1	1q-Amp	0.926	1
MBD1	Del_2q34	0.926	1
MBD1	Del_2q37.1	0.926	1
MED13	ADC	0.926	1
MED13	CNOT1	0.926	1
MED13	Del_Xp11.3	0.926	1
NCOA1	TRERF1	0.926	1
PARD3	PHLDA3	0.926	1
PARD3	19p-Del	0.926	1
PPARG	ZNF750	0.926	1
PPARG	Del_2q37.1	0.926	1
PPARGC1A	Amp_22q12.2	0.926	1
PPP4R1	WAC	0.926	1
PPP4R1	ZNF750	0.926	1
PPP4R1	EPS8	0.926	1
PPP4R1	1q-Amp	0.926	1
RBM10	Del_2q37.1	0.926	1
RBP2	Amp_16p13.2	0.926	1
SF3B3	Amp_4p16.3	0.926	1
SNRPB	ARID1B	0.926	1
SSH3	Amp_22q12.2	0.926	1
TAF11	7p-Amp	0.926	1
THRAP3	USP28	0.926	1
THRAP3	Del_6q27	0.926	1
TRERF1	OGDH	0.926	1
USP28	BAP1	0.926	1
USP28	EPS8	0.926	1
USP28	Del_1p36.11	0.926	1
WAC	Del_Xp11.3	0.926	1
ZNF750	Del_Xp11.3	0.926	1
ADC	Amp_16p13.2	0.926	1
CDH1	Del_Xp11.3	0.926	1
EPS8	Del_6q27	0.926	1
EPS8	Del_Xp11.3	0.926	1
FAM47C	OGDH	0.926	1
SCARF2	7p-Amp	0.926	1
TMCO4	Del_9p21.3	0.926	1
17q-Amp	Del_9p21.3	0.926	1
1q-Amp	Del_6q27	0.926	1
3p-Amp	Del_8p23.3	0.926	1
5q-Del	Amp_20q11.21	0.926	1
Amp_4p16.3	Del_2q22.1	0.926	1
Amp_16p13.2	Del_Xp11.3	0.926	1
Amp_22q12.2	Del_4q22.1	0.926	1
Del_1p36.11	Del_6q27	0.926	1
Del_1p36.11	Del_11q25	0.926	1
Del_2q37.1	Del_Xp11.3	0.926	1
ARID1A	CFHR4	0.927	1
ARID1A	TFG	0.927	1
ARID1A	Del_Xp11.3	0.927	1
COPZ2	9q-Del	0.927	1
COPZ2	Del_5q12.1	0.927	1
EP300	15q-Del	0.927	1
ERCC2	STAG2	0.927	1
KPTN	Del_5q12.1	0.927	1
NFE2L2	4p-Del	0.927	1
PLCXD3	RB1	0.927	1
PSIP1	17p-Del	0.927	1
RXRA	14q-Del	0.927	1
SF1	Amp_5p15.33	0.927	1
SF3B1	14q-Del	0.927	1
AGR3	9p-Del	0.927	1
ARID2	Amp_1q23.3	0.927	1
CDK12	Del_16p13.3	0.927	1
CPD	SPTAN1	0.927	1
HFM1	Amp_6p22.3	0.927	1
HSP90AA1	Del_22q13.32	0.927	1
PPP4R1	Amp_5p15.33	0.927	1
DAZAP1	9p-Del	0.927	1
OGDH	Amp_6p22.3	0.927	1
11q-Del	Amp_12q15	0.927	1
5q-Del	Del_6p25.3	0.927	1
Amp_1p34.2	Amp_1q23.3	0.927	1
Amp_1q23.3	Del_10q23.31	0.927	1
Amp_5p15.33	Del_Xp11.3	0.927	1
Amp_13q22.1	Del_19p13.3	0.927	1
Del_16q23.1	Del_19p13.3	0.927	1
ARID1A	GTF2I	0.928	1
ARID1A	ITGA4	0.928	1
ARID1A	SSH3	0.928	1
ARID1A	DNAH6	0.928	1
ASXL2	METTL3	0.928	1
ASXL2	SHANK1	0.928	1
BTG2	Del_2q34	0.928	1
CREBBP	10q-Del	0.928	1
CTNNB1	Amp_10p14	0.928	1
GPS2	METTL3	0.928	1
GPS2	RHOA	0.928	1
HIST1H3B	RPTN	0.928	1
HIST1H3B	NDC80	0.928	1
HIST1H3B	RARG	0.928	1
HIST1H3B	Del_7q36.3	0.928	1
IDH1	PSIP1	0.928	1
IDH1	DENND5B	0.928	1
IDH1	RBM26	0.928	1
IDH1	15q-Del	0.928	1
METTL3	SF1	0.928	1
METTL3	ZNF511	0.928	1
METTL3	ASXL1	0.928	1
METTL3	Del_12p13.1	0.928	1
MIPOL1	RHOA	0.928	1
PIGS	PSIP1	0.928	1
PIGS	7q-Amp	0.928	1
PIGS	15q-Del	0.928	1
PIGS	Amp_1q23.3	0.928	1
POTEG	DENND5B	0.928	1
PSIP1	UGP2	0.928	1
PTEN	Amp_10p14	0.928	1
RHOA	SF1	0.928	1
RHOA	ZNF511	0.928	1
RHOA	NKX2-2	0.928	1
RHOA	ASXL1	0.928	1
RHOB	ZBTB47	0.928	1
RHOB	UNC93B1	0.928	1
RPTN	TMCO4	0.928	1
RPTN	17q-Amp	0.928	1
RPTN	Del_1q32.1	0.928	1
RPTN	Del_Xq21.33	0.928	1
SARNP	RBM26	0.928	1
SARNP	15q-Del	0.928	1
SF1	SHANK1	0.928	1
ZNF180	TMCO4	0.928	1
ZNF180	17q-Amp	0.928	1
ZNF180	Del_1q32.1	0.928	1
CDKN2AIPNL	Amp_7p21.1	0.928	1
DCDC1	Amp_10p14	0.928	1
DDX3X	Del_1q32.1	0.928	1
EPHA2	Amp_19q13.43	0.928	1
NAA15	TMCO4	0.928	1
NAA15	Del_1q32.1	0.928	1
NDC80	Del_1q32.1	0.928	1
NDC80	Del_Xq21.33	0.928	1
OR10Z1	RBM26	0.928	1
OR10Z1	7q-Amp	0.928	1
OR10Z1	Amp_1q23.3	0.928	1
PARD3	8p-Del	0.928	1
RARG	17q-Amp	0.928	1
RARG	Del_Xq21.33	0.928	1
RBM26	FUS	0.928	1
SSH3	Amp_3p25.2	0.928	1
WAC	Amp_10p14	0.928	1
DNAH6	Amp_3p25.2	0.928	1
DNAH6	Amp_5p15.33	0.928	1
GNA13	19q-Amp	0.928	1
TMCO4	Del_7q36.3	0.928	1
17q-Amp	Amp_4q13.3	0.928	1
19q-Amp	Del_1q32.1	0.928	1
20p-Amp	Amp_12q15	0.928	1
3q-Amp	Del_6q27	0.928	1
14q-Del	Amp_19q13.43	0.928	1
19p-Del	Del_2q34	0.928	1
6q-Del	Amp_1q23.3	0.928	1
6q-Del	Amp_7p21.1	0.928	1
Amp_1q23.3	Del_15q13.1	0.928	1
Amp_4q13.3	Del_Xq21.33	0.928	1
Amp_7p21.1	Del_15q13.1	0.928	1
Amp_13q22.1	Amp_20q11.21	0.928	1
Amp_20q11.21	Del_16q23.1	0.928	1
Amp_20q11.21	Del_18q23	0.928	1
Del_6p25.3	Del_9p23	0.928	1
CFHR4	Amp_8q22.3	0.929	1
CSMD3	8q-Amp	0.929	1
ERCC2	ZFP36L2	0.929	1
ERCC2	3p-Amp	0.929	1
KPTN	Del_13q14.2	0.929	1
NF1	FAT1	0.929	1
NF1	Amp_1q21.3	0.929	1
NF2	Del_18q23	0.929	1
CDKN2AIPNL	Del_8p23.3	0.929	1
NCOA1	Del_13q14.2	0.929	1
ASXL1	Del_8p21.3	0.929	1
7q-Amp	Amp_17q23.3	0.929	1
Amp_1q21.3	Del_3p14.2	0.929	1
Amp_7p21.1	Del_2q37.1	0.929	1
Amp_17q23.3	Del_4q34.2	0.929	1
ASXL2	NF2	0.93	1
ASXL2	STK32B	0.93	1
ASXL2	Amp_3p25.2	0.93	1
C3orf70	4q-Del	0.93	1
CDKN2A	5q-Del	0.93	1
EP300	FGFR3	0.93	1
ERBB2	SPTAN1	0.93	1
ERCC2	RXRA	0.93	1
ERCC2	MYO16	0.93	1
KLF5	SLC9A4	0.93	1
KLF5	ZNF626	0.93	1
NF1	AGR3	0.93	1
NF1	RBP2	0.93	1
NF1	DAZAP1	0.93	1
NRAS	CDKN2AIPNL	0.93	1
PSIP1	Amp_1q23.3	0.93	1
PSIP1	Del_15q13.1	0.93	1
RHOB	Del_19p13.3	0.93	1
RXRA	Del_11p15.5	0.93	1
SHANK1	Del_2q34	0.93	1
ZFP36L2	PARD3	0.93	1
ZNF180	Del_16q23.1	0.93	1
ACTB	ARID1B	0.93	1
CDKN2AIPNL	GLTP	0.93	1
CDKN2AIPNL	UBA52	0.93	1
CDKN2AIPNL	ZBTB47	0.93	1
CDKN2AIPNL	HLA-A	0.93	1
CDKN2AIPNL	UNC93B1	0.93	1
CTCF	FAT1	0.93	1
DPYS	Del_11q23.3	0.93	1
FAT1	MARK2	0.93	1
FAT1	PPARG	0.93	1
FAT1	Del_Xp11.3	0.93	1
MARK2	Del_11q23.3	0.93	1
MBD1	Del_11q23.3	0.93	1
NAA15	Amp_1q21.3	0.93	1
NDC80	Del_16q23.1	0.93	1
PARD3	RIPK4	0.93	1
PARD3	SLC9A4	0.93	1
PARD3	ZNF626	0.93	1
PSMC6	Amp_17q12	0.93	1
RARG	Del_16q23.1	0.93	1
RIPK4	ARID1B	0.93	1
RIPK4	4q-Del	0.93	1
SLC9A4	ARID1B	0.93	1
STK32B	Amp_17q12	0.93	1
USP28	20q-Amp	0.93	1
ZNF626	7p-Amp	0.93	1
ARID1B	CUL1	0.93	1
ARID1B	3p-Amp	0.93	1
ZNF773	Amp_17q12	0.93	1
19q-Amp	Amp_12q15	0.93	1
20q-Amp	Amp_11q22.2	0.93	1
3p-Amp	7p-Amp	0.93	1
16p-Del	Del_11p15.5	0.93	1
16p-Del	Del_11q23.3	0.93	1
Amp_1q21.3	Del_7q36.3	0.93	1
Amp_1q21.3	Del_11q23.3	0.93	1
Amp_4q13.3	Del_16q23.1	0.93	1
Amp_12q15	Del_7q36.3	0.93	1
Amp_13q22.1	Del_7q36.3	0.93	1
Amp_20q11.21	Del_6q27	0.93	1
Amp_20q11.21	Del_11q25	0.93	1
Del_6p25.3	Del_7q36.3	0.93	1
Del_7q36.3	Del_16q23.1	0.93	1
ARID1A	NCOA1	0.931	1
ARID1A	Del_4q34.2	0.931	1
ASXL2	ZNF185	0.931	1
BTG2	ASXL1	0.931	1
BTG2	Del_12p13.1	0.931	1
CDKN2A	RARG	0.931	1
CDKN2A	Del_3p14.2	0.931	1
ELF3	FOXA1	0.931	1
ELF3	CDKN2AIPNL	0.931	1
ELF3	DCDC1	0.931	1
ELF3	18q-Del	0.931	1
ERBB2	EPHA2	0.931	1
ERBB2	NCOA1	0.931	1
ERBB2	OGDH	0.931	1
FOXA1	Amp_17q23.3	0.931	1
FOXA1	Del_3p14.2	0.931	1
FOXQ1	Amp_17q23.3	0.931	1
GPR50	Del_3p14.2	0.931	1
GTF2I	HORMAD1	0.931	1
GTF2I	NF2	0.931	1
GTF2I	PSMC6	0.931	1
GTF2I	STK32B	0.931	1
GTF2I	CNOT3	0.931	1
GTF2I	ZNF773	0.931	1
GTF2I	Amp_6q21	0.931	1
HIST1H2AG	HSP90AA1	0.931	1
HIST1H2AG	ASXL1	0.931	1
HORMAD1	ITGA4	0.931	1
HORMAD1	PPARGC1A	0.931	1
HORMAD1	DNAH6	0.931	1
KDM6A	SHANK1	0.931	1
METTL3	Amp_8q22.3	0.931	1
NF1	MARK2	0.931	1
NF1	MBD1	0.931	1
NF1	PPP4R1	0.931	1
NF2	PIK3CA	0.931	1
NF2	ITGA4	0.931	1
NF2	NEK11	0.931	1
NF2	PPARGC1A	0.931	1
NF2	SSH3	0.931	1
NFE2L3	Amp_17q23.3	0.931	1
NHLRC1	FAT1	0.931	1
NHLRC1	Del_11q23.3	0.931	1
NHLRC1	Del_12p13.1	0.931	1
PIK3CA	STK32B	0.931	1
RB1	Del_8p21.3	0.931	1
RHOB	Amp_1q21.3	0.931	1
RUNX1	Del_3p14.2	0.931	1
SHANK1	Amp_8q22.3	0.931	1
TGIF2LX	FAT1	0.931	1
TGIF2LX	HSP90AA1	0.931	1
TP53	Amp_8q22.3	0.931	1
ZBTB7B	ITGA4	0.931	1
ZBTB7B	TXNIP	0.931	1
ZBTB7B	DNAH6	0.931	1
ZFP36L2	Amp_11q13.3	0.931	1
ACTB	Amp_3q26.33	0.931	1
ARID2	HSP90AA1	0.931	1
ARID2	ASXL1	0.931	1
CCNE2	Del_12p13.1	0.931	1
CDKN2AIPNL	Del_3p14.2	0.931	1
DCDC1	Amp_17q23.3	0.931	1
DLX6	Amp_17q12	0.931	1
EPHA2	Amp_5p15.33	0.931	1
HFM1	Amp_19q12	0.931	1
HSP90AA1	IL10RB	0.931	1
HSP90AA1	PHLDA3	0.931	1
HSP90AA1	Amp_1p34.2	0.931	1
ITGA4	Amp_6q21	0.931	1
KDM5A	Amp_19q12	0.931	1
LETMD1	ASXL1	0.931	1
LETMD1	20q-Amp	0.931	1
NEK11	STK32B	0.931	1
PHLDA3	ASXL1	0.931	1
PPARGC1A	PSMC6	0.931	1
PPARGC1A	STK32B	0.931	1
PSMC6	TXNIP	0.931	1
SLC9A4	Amp_3q26.33	0.931	1
SNRPB	Del_11q23.3	0.931	1
SSH3	STK32B	0.931	1
SSH3	ZNF773	0.931	1
STK32B	TXNIP	0.931	1
TAF11	ASXL1	0.931	1
THRAP3	Amp_17q23.3	0.931	1
TXNIP	CNOT3	0.931	1
ZNF626	Amp_11q13.3	0.931	1
ZNF750	Amp_17q23.3	0.931	1
ASXL1	SCARF2	0.931	1
BAP1	Del_3p14.2	0.931	1
CUL1	Amp_3q26.33	0.931	1
CUL1	Del_10q23.31	0.931	1
DNAH6	ZNF773	0.931	1
SCARF2	Del_11q23.3	0.931	1
1q-Amp	Amp_17q23.3	0.931	1
20q-Amp	19p-Del	0.931	1
3p-Amp	Amp_11q13.3	0.931	1
8p-Del	Amp_10p14	0.931	1
9p-Del	Del_8p21.3	0.931	1
Amp_1q21.3	Amp_5p15.33	0.931	1
Amp_3q26.33	Del_14q24.1	0.931	1
Amp_4p16.3	Amp_19q12	0.931	1
Amp_4p16.3	Amp_20q11.21	0.931	1
Amp_10p14	Amp_17q23.3	0.931	1
Amp_22q12.2	Del_18q23	0.931	1
ASXL2	PIK3CA	0.932	1
ATM	Amp_3p25.2	0.932	1
CSMD3	CPD	0.932	1
CSMD3	CNOT1	0.932	1
ERCC2	Amp_7p21.1	0.932	1
ERCC2	Del_6q27	0.932	1
FOXA1	Del_9p23	0.932	1
GPR50	8p-Del	0.932	1
IDH1	SPTAN1	0.932	1
RB1	Del_2q37.1	0.932	1
RHOA	Amp_10p14	0.932	1
SARNP	Amp_7p11.2	0.932	1
STAG2	10q-Del	0.932	1
TSC1	Amp_17q12	0.932	1
ZNF486	SPTAN1	0.932	1
DENND5B	8q-Amp	0.932	1
20q-Amp	Del_22q13.32	0.932	1
3q-Amp	Amp_8p11.23	0.932	1
8p-Del	Del_1p36.11	0.932	1
Amp_3q26.33	Del_Xq21.33	0.932	1
Del_10q23.31	Del_Xq21.33	0.932	1
Del_11q23.3	Del_22q13.32	0.932	1
CDKN1A	Del_2q34	0.933	1
COPZ2	IDH1	0.933	1
COPZ2	PIGS	0.933	1
COPZ2	POTEG	0.933	1
COPZ2	ZNF486	0.933	1
COPZ2	OR10Z1	0.933	1
CSMD3	ERBB2	0.933	1
CSMD3	ITGA4	0.933	1
EP300	RPTN	0.933	1
EP300	DDX3X	0.933	1
EP300	RARG	0.933	1
EP300	Del_7q36.3	0.933	1
ERBB3	Del_12p13.1	0.933	1
GPS2	Del_14q24.1	0.933	1
GTF2I	16p-Del	0.933	1
IDH1	KPTN	0.933	1
IDH1	PTTG1IP	0.933	1
KPTN	POTEG	0.933	1
KPTN	SARNP	0.933	1
KPTN	ZNF486	0.933	1
KPTN	OR10Z1	0.933	1
KPTN	UGP2	0.933	1
KPTN	FUS	0.933	1
NF1	FAM47C	0.933	1
PIGS	PTTG1IP	0.933	1
POTEG	PTTG1IP	0.933	1
PTTG1IP	SARNP	0.933	1
PTTG1IP	OR10Z1	0.933	1
PTTG1IP	UGP2	0.933	1
PTTG1IP	FUS	0.933	1
RXRA	NEK11	0.933	1
RXRA	DNAH6	0.933	1
ZFP36L1	ATAD5	0.933	1
ITGA4	MYO16	0.933	1
MYO16	DNAH6	0.933	1
NAA15	11p-Del	0.933	1
NAA15	17p-Del	0.933	1
NDC80	11p-Del	0.933	1
NDC80	17p-Del	0.933	1
PPARGC1A	16p-Del	0.933	1
SF3B3	Amp_13q22.1	0.933	1
TXNIP	16p-Del	0.933	1
FAM47C	Del_6p25.3	0.933	1
19q-Amp	11p-Del	0.933	1
3q-Amp	Del_4q22.1	0.933	1
7p-Amp	Del_5q12.1	0.933	1
17p-Del	Del_7q36.3	0.933	1
6q-Del	Amp_5p15.33	0.933	1
Amp_5p15.33	Del_15q13.1	0.933	1
Del_2q34	Del_19p13.3	0.933	1
Del_4q22.1	Del_15q13.1	0.933	1
ARID1A	UNC93B1	0.934	1
ATM	Del_13q14.2	0.934	1
CDKN1A	SHANK1	0.934	1
ERCC2	PKHD1	0.934	1
ERCC2	MED13	0.934	1
POTEG	Del_2q37.1	0.934	1
SARNP	Del_2q37.1	0.934	1
ZFP36L1	DAZAP1	0.934	1
ARID2	Del_2q34	0.934	1
DDX3X	Amp_6p22.3	0.934	1
HFM1	Del_8p21.3	0.934	1
KDM5A	5p-Amp	0.934	1
KDM5A	Del_8p21.3	0.934	1
NCOA1	Del_8p21.3	0.934	1
OR10Z1	Del_2q37.1	0.934	1
PPARG	Del_2q22.1	0.934	1
GNA13	10q-Del	0.934	1
GNA13	6q-Del	0.934	1
TMCO4	Del_15q13.1	0.934	1
17q-Amp	6q-Del	0.934	1
19q-Amp	Amp_6p22.3	0.934	1
5p-Amp	Amp_4p16.3	0.934	1
10q-Del	Del_Xq21.33	0.934	1
Amp_12q15	Del_16p13.3	0.934	1
Del_2q22.1	Del_Xp11.3	0.934	1
Del_15q13.1	Del_Xq21.33	0.934	1
ARID1A	HSP90AA1	0.935	1
ARID1A	ASXL1	0.935	1
ATM	ZFP36L2	0.935	1
ATM	3p-Amp	0.935	1
C3orf70	TFG	0.935	1
C3orf70	Del_4q34.2	0.935	1
CDKN1A	NF2	0.935	1
CDKN1A	FUT5	0.935	1
CDKN2A	NFE2L2	0.935	1
CNNM4	ZFP36L2	0.935	1
CNNM4	SLC9A4	0.935	1
CNNM4	CUL1	0.935	1
CREBBP	Del_5q12.1	0.935	1
ELF3	3q-Amp	0.935	1
GPS2	HRAS	0.935	1
GPS2	ACTB	0.935	1
GPS2	ZNF626	0.935	1
GPS2	CUL1	0.935	1
HORMAD1	5q-Del	0.935	1
HRAS	SF1	0.935	1
HRAS	ZNF511	0.935	1
IDH1	EPHA2	0.935	1
IDH1	HFM1	0.935	1
IDH1	KDM5A	0.935	1
IDH1	NCOA1	0.935	1
IDH1	Amp_4p16.3	0.935	1
KDM6A	Del_1q32.1	0.935	1
KDM6A	Del_4q34.2	0.935	1
METTL3	Del_11q23.3	0.935	1
MIPOL1	ZFP36L2	0.935	1
MIPOL1	ACTB	0.935	1
MIPOL1	RIPK4	0.935	1
MIPOL1	SLC9A4	0.935	1
NHLRC1	Del_2q22.1	0.935	1
PIGS	NCOA1	0.935	1
PIGS	OGDH	0.935	1
PIGS	Amp_4p16.3	0.935	1
POTEG	EPHA2	0.935	1
POTEG	KDM5A	0.935	1
POTEG	OGDH	0.935	1
POTEG	Amp_13q22.1	0.935	1
PSIP1	KDM5A	0.935	1
PSIP1	OGDH	0.935	1
RHOB	SF3B1	0.935	1
RHOB	Amp_11q22.2	0.935	1
SARNP	HFM1	0.935	1
SARNP	KDM5A	0.935	1
SARNP	Amp_4p16.3	0.935	1
SARNP	Del_6p25.3	0.935	1
SF1	ZFP36L2	0.935	1
SF1	SLC9A4	0.935	1
SHANK1	FAT1	0.935	1
SHANK1	Del_11q23.3	0.935	1
TSC1	CDK12	0.935	1
TSC1	NCOA1	0.935	1
TSC1	Amp_4p16.3	0.935	1
ZFP36L2	TFG	0.935	1
ZNF486	NCOA1	0.935	1
ZNF486	Del_16q23.1	0.935	1
ZNF511	RIPK4	0.935	1
ZNF511	SLC9A4	0.935	1
DDX3X	Del_22q13.32	0.935	1
DENND5B	KDM5A	0.935	1
DENND5B	Amp_4p16.3	0.935	1
DLX6	5q-Del	0.935	1
EPHA2	OR10Z1	0.935	1
EPHA2	FUS	0.935	1
HFM1	OR10Z1	0.935	1
HFM1	UGP2	0.935	1
HSP90AA1	Amp_1q21.3	0.935	1
KDM5A	UGP2	0.935	1
KDM5A	FUS	0.935	1
LETMD1	Amp_8p11.21	0.935	1
LETMD1	Amp_8q22.3	0.935	1
NAA15	20p-Amp	0.935	1
NCOA1	15q-Del	0.935	1
NKX2-2	RIPK4	0.935	1
NKX2-2	ZNF626	0.935	1
OR10Z1	Amp_4p16.3	0.935	1
OR10Z1	Del_6p25.3	0.935	1
RARG	Del_22q13.32	0.935	1
RBM26	Amp_4p16.3	0.935	1
RIPK4	TFG	0.935	1
RIPK4	Del_4q22.1	0.935	1
RIPK4	Del_4q34.2	0.935	1
SLC9A4	TFG	0.935	1
TFG	ZNF626	0.935	1
UGP2	Amp_4p16.3	0.935	1
UGP2	Amp_13q22.1	0.935	1
UGP2	Del_16q23.1	0.935	1
FUT5	5q-Del	0.935	1
FUT5	Del_19p13.3	0.935	1
ZNF185	11q-Del	0.935	1
20p-Amp	5q-Del	0.935	1
20p-Amp	Del_7q36.3	0.935	1
20q-Amp	11p-Del	0.935	1
20q-Amp	Amp_19q12	0.935	1
19p-Del	Del_2q22.1	0.935	1
5q-Del	Amp_6q21	0.935	1
9q-Del	Del_4q22.1	0.935	1
9q-Del	Del_6q27	0.935	1
Amp_1q21.3	Del_12p13.1	0.935	1
Amp_3p25.2	Del_Xq21.33	0.935	1
Amp_4q13.3	Del_22q13.32	0.935	1
Amp_10p14	Amp_17q12	0.935	1
Del_5q12.1	Del_11q25	0.935	1
Del_9p23	Del_19p13.3	0.935	1
ARID1A	Amp_8p11.21	0.936	1
ATM	GNA13	0.936	1
ATM	TMCO4	0.936	1
ATM	Del_1q32.1	0.936	1
CFHR4	PROS1	0.936	1
CFHR4	DPYS	0.936	1
CFHR4	PPARG	0.936	1
CFHR4	Del_Xp11.3	0.936	1
CTNNB1	TMCO4	0.936	1
CTNNB1	Del_1q32.1	0.936	1
FBXW7	Del_8p23.3	0.936	1
FGFR3	NRAS	0.936	1
FGFR3	GLTP	0.936	1
FOXA1	9q-Del	0.936	1
FOXA1	Del_1q32.1	0.936	1
FOXA1	Del_Xq21.33	0.936	1
FOXQ1	14q-Del	0.936	1
FOXQ1	Del_1q32.1	0.936	1
GPR50	HIST1H3B	0.936	1
GPR50	CDK12	0.936	1
GPR50	TMCO4	0.936	1
GPR50	14q-Del	0.936	1
HIST1H3B	RUNX1	0.936	1
HIST1H3B	CASP8	0.936	1
HIST1H3B	EXOSC10	0.936	1
HIST1H3B	WAC	0.936	1
HIST1H3B	ZNF750	0.936	1
HIST1H3B	BAP1	0.936	1
HIST1H3B	CDH1	0.936	1
HIST1H3B	1q-Amp	0.936	1
KPTN	11p-Del	0.936	1
KRAS	17q-Amp	0.936	1
KRAS	Del_1q32.1	0.936	1
METTL3	RBM10	0.936	1
NFE2L2	Del_2q22.1	0.936	1
NFE2L3	TMCO4	0.936	1
NFE2L3	17q-Amp	0.936	1
NFE2L3	4p-Del	0.936	1
NFE2L3	Del_1q32.1	0.936	1
NFE2L3	Del_5q12.1	0.936	1
PIK3CA	RBM10	0.936	1
PIK3CA	CNOT1	0.936	1
PIK3CA	FAM47C	0.936	1
PKHD1	Del_8p23.3	0.936	1
PROS1	CTCF	0.936	1
PROS1	MARK2	0.936	1
PROS1	PPP4R1	0.936	1
PROS1	USP28	0.936	1
PTEN	CDK12	0.936	1
PTTG1IP	17p-Del	0.936	1
RHOA	CNOT1	0.936	1
RUNX1	GNA13	0.936	1
RUNX1	4p-Del	0.936	1
RUNX1	Del_1q32.1	0.936	1
SF3B1	Del_4q22.1	0.936	1
SHANK1	FAM47C	0.936	1
STAG2	GLTP	0.936	1
TBC1D12	HFM1	0.936	1
CASP8	CDK12	0.936	1
CDK12	DCDC1	0.936	1
CDK12	IKZF2	0.936	1
CDK12	PARD3	0.936	1
CDK12	EPS8	0.936	1
CDK12	1q-Amp	0.936	1
CDKN2AIPNL	SPTAN1	0.936	1
CTCF	MBD1	0.936	1
CTCF	PPP4R1	0.936	1
CTCF	USP28	0.936	1
CTCF	Del_17p12	0.936	1
DCDC1	TMCO4	0.936	1
DCDC1	17q-Amp	0.936	1
DCDC1	14q-Del	0.936	1
DCDC1	4p-Del	0.936	1
DCDC1	Del_1q32.1	0.936	1
DLX6	Amp_1q21.3	0.936	1
DPYS	USP28	0.936	1
DPYS	Del_17p12	0.936	1
EXOSC10	17q-Amp	0.936	1
IKZF2	GNA13	0.936	1
IKZF2	TMCO4	0.936	1
IKZF2	Del_Xq21.33	0.936	1
MARK2	PPARG	0.936	1
MARK2	Del_Xp11.3	0.936	1
MBD1	PPARG	0.936	1
MBD1	USP28	0.936	1
NCOA1	Del_6q27	0.936	1
PPARG	USP28	0.936	1
PPARG	Del_Xp11.3	0.936	1
PPP4R1	USP28	0.936	1
PPP4R1	Del_17p12	0.936	1
TFG	Del_17p12	0.936	1
THRAP3	GNA13	0.936	1
THRAP3	TMCO4	0.936	1
UBA52	Del_16p13.3	0.936	1
WAC	GNA13	0.936	1
WAC	TMCO4	0.936	1
WAC	17q-Amp	0.936	1
WAC	Del_5q12.1	0.936	1
WAC	Del_Xq21.33	0.936	1
ZNF750	TMCO4	0.936	1
ZNF750	17q-Amp	0.936	1
ZNF750	Del_Xq21.33	0.936	1
BAP1	GNA13	0.936	1
BAP1	17q-Amp	0.936	1
BAP1	Del_Xq21.33	0.936	1
CDH1	Del_5q12.1	0.936	1
EPS8	GNA13	0.936	1
TMCO4	Del_4q34.2	0.936	1
UNC93B1	Del_16p13.3	0.936	1
ZNF185	Amp_1q21.3	0.936	1
17q-Amp	1q-Amp	0.936	1
20p-Amp	Del_22q13.32	0.936	1
22q-Del	Del_4q22.1	0.936	1
4p-Del	Del_1p36.11	0.936	1
9q-Del	Del_1p36.11	0.936	1
Amp_3p25.2	Amp_7p11.2	0.936	1
Amp_8p11.21	Amp_11q22.2	0.936	1
Amp_13q22.1	Amp_19q13.43	0.936	1
Amp_22q12.2	Del_11q25	0.936	1
Del_1q32.1	Del_4q34.2	0.936	1
Del_17p12	Del_Xp11.3	0.936	1
ARID1A	Amp_8p11.23	0.937	1
BTG2	RBM10	0.937	1
BTG2	SF3B3	0.937	1
BTG2	FAM47C	0.937	1
C12orf43	DIAPH2	0.937	1
C12orf43	CPD	0.937	1
C12orf43	RBM10	0.937	1
C12orf43	SF3B3	0.937	1
C12orf43	CNOT1	0.937	1
C12orf43	Amp_1q21.3	0.937	1
CFHR4	ZFP36L1	0.937	1
CSMD3	MED13	0.937	1
DIAPH2	NHLRC1	0.937	1
DIAPH2	TGIF2LX	0.937	1
DIAPH2	CCNE2	0.937	1
DIAPH2	IL10RB	0.937	1
DIAPH2	PHLDA3	0.937	1
DIAPH2	SNRPB	0.937	1
DIAPH2	19p-Del	0.937	1
EP300	Amp_1p34.2	0.937	1
ERCC2	ZNF511	0.937	1
ERCC2	TFG	0.937	1
ERCC2	5p-Amp	0.937	1
FBXW7	PSIP1	0.937	1
FBXW7	DENND5B	0.937	1
FBXW7	7q-Amp	0.937	1
FGFR3	SF3B3	0.937	1
FGFR3	TRERF1	0.937	1
GTF2I	Del_14q24.1	0.937	1
HIST1H2AG	CPD	0.937	1
HIST1H2AG	RBM10	0.937	1
HIST1H2AG	CNOT1	0.937	1
MIPOL1	Del_13q14.2	0.937	1
NFE2L2	ZBTB47	0.937	1
NHLRC1	TRERF1	0.937	1
NHLRC1	CNOT1	0.937	1
NRAS	SF3B1	0.937	1
NRAS	Amp_11q22.2	0.937	1
PKHD1	PSIP1	0.937	1
RB1	CUL1	0.937	1
RXRA	UNC93B1	0.937	1
SF3B1	HLA-A	0.937	1
TGIF2LX	CPD	0.937	1
TGIF2LX	TRERF1	0.937	1
TGIF2LX	CNOT1	0.937	1
ARID2	MARK2	0.937	1
ATAD5	7q-Amp	0.937	1
ATAD5	15q-Del	0.937	1
CCNE2	CPD	0.937	1
CCNE2	SF3B3	0.937	1
CCNE2	CNOT1	0.937	1
CCNE2	Amp_1q21.3	0.937	1
CPD	19p-Del	0.937	1
DDX3X	Amp_22q12.2	0.937	1
DENND5B	MED13	0.937	1
GLTP	MYO16	0.937	1
IL10RB	TRERF1	0.937	1
IL10RB	FAM47C	0.937	1
ITGA4	Del_14q24.1	0.937	1
LETMD1	FAM47C	0.937	1
MARK2	Amp_1p34.2	0.937	1
MBD1	Amp_1p34.2	0.937	1
MYO16	HLA-A	0.937	1
MYO16	UNC93B1	0.937	1
NDC80	Amp_20q11.21	0.937	1
PHLDA3	TRERF1	0.937	1
PHLDA3	FAM47C	0.937	1
PPARG	9p-Del	0.937	1
RARG	Del_18q23	0.937	1
RBM10	SNRPB	0.937	1
RBM10	TAF11	0.937	1
RBM10	SCARF2	0.937	1
SF3B3	TAF11	0.937	1
SNRPB	TRERF1	0.937	1
SNRPB	CNOT1	0.937	1
TAF11	TRERF1	0.937	1
TAF11	CNOT1	0.937	1
TFG	Del_13q14.2	0.937	1
UBA52	16p-Del	0.937	1
CNOT1	SCARF2	0.937	1
HLA-A	16p-Del	0.937	1
19q-Amp	8q-Amp	0.937	1
3p-Amp	9p-Del	0.937	1
7q-Amp	Amp_16p13.2	0.937	1
10q-Del	9q-Del	0.937	1
19p-Del	Amp_1q21.3	0.937	1
4q-Del	Del_2q34	0.937	1
Amp_1p34.2	Del_Xp11.3	0.937	1
Amp_4q13.3	Amp_20q11.21	0.937	1
Amp_4q13.3	Amp_22q12.2	0.937	1
Amp_12q15	Del_8p23.3	0.937	1
Amp_17q12	Del_8p21.3	0.937	1
Amp_22q12.2	Del_7q36.3	0.937	1
BTG2	Amp_19q12	0.938	1
BTG2	Del_9p21.3	0.938	1
C12orf43	Amp_19q12	0.938	1
C3orf70	ASXL1	0.938	1
CFHR4	ERBB2	0.938	1
COPZ2	8q-Amp	0.938	1
CTNNB1	Amp_1q23.3	0.938	1
ELF3	Del_9p23	0.938	1
EP300	Amp_19q13.43	0.938	1
ERBB2	HIST1H2AG	0.938	1
ERBB2	SNRPB	0.938	1
ERBB2	USP28	0.938	1
ERBB2	19p-Del	0.938	1
ERBB2	Del_Xp11.3	0.938	1
FGFR3	SSH3	0.938	1
FOXQ1	Amp_1q23.3	0.938	1
GPR50	PIK3CA	0.938	1
HIST1H2AG	Amp_19q12	0.938	1
HIST1H3B	Del_11p15.5	0.938	1
HORMAD1	DDX3X	0.938	1
HORMAD1	NAA15	0.938	1
HORMAD1	19q-Amp	0.938	1
HORMAD1	Amp_4q13.3	0.938	1
KLF5	Del_13q14.2	0.938	1
NF2	RARG	0.938	1
NF2	Del_7q36.3	0.938	1
PIK3CA	CDH1	0.938	1
PKHD1	TBC1D12	0.938	1
PTTG1IP	8q-Amp	0.938	1
RPTN	CNOT3	0.938	1
STAG2	DNAH6	0.938	1
ZBTB7B	NDC80	0.938	1
ZBTB7B	Del_7q36.3	0.938	1
ZFP36L2	ASXL1	0.938	1
ZNF180	ZNF773	0.938	1
ACTB	ASXL1	0.938	1
AGR3	Del_8p21.3	0.938	1
DDX3X	ZNF773	0.938	1
DLX6	FUT5	0.938	1
DLX6	ZNF185	0.938	1
HSP90AA1	3p-Amp	0.938	1
IL10RB	Amp_19q12	0.938	1
ITGA4	Amp_8p11.23	0.938	1
ITGA4	Del_16p13.3	0.938	1
LETMD1	Amp_19q12	0.938	1
NAA15	PSMC6	0.938	1
NAA15	STK32B	0.938	1
NDC80	ZNF773	0.938	1
PPP4R1	Amp_19q12	0.938	1
PSMC6	19q-Amp	0.938	1
PSMC6	Amp_4q13.3	0.938	1
RARG	CNOT3	0.938	1
SSH3	Amp_8p11.23	0.938	1
STK32B	Del_7q36.3	0.938	1
THRAP3	Amp_1q23.3	0.938	1
ZNF626	ASXL1	0.938	1
ADC	Del_8p21.3	0.938	1
ASXL1	CUL1	0.938	1
BAP1	Amp_1q23.3	0.938	1
CNOT3	19q-Amp	0.938	1
DAZAP1	Del_8p21.3	0.938	1
FUT5	Amp_19q13.43	0.938	1
ZNF773	Amp_4q13.3	0.938	1
17q-Amp	Del_11p15.5	0.938	1
20p-Amp	Amp_8q22.3	0.938	1
5p-Amp	Del_13q14.2	0.938	1
8q-Amp	Del_16p13.3	0.938	1
4q-Del	Del_13q14.2	0.938	1
8p-Del	Amp_17q23.3	0.938	1
Amp_4q13.3	Amp_6q21	0.938	1
Amp_6q21	Del_7q36.3	0.938	1
Amp_8q22.3	Del_22q13.32	0.938	1
Amp_11q13.3	Del_17p12	0.938	1
Amp_12q15	Amp_19q12	0.938	1
Amp_19q12	Del_16q23.1	0.938	1
Del_1q32.1	Del_11p15.5	0.938	1
ASXL2	Del_17p12	0.939	1
ATM	ASXL1	0.939	1
ATM	Del_9p21.3	0.939	1
BTG2	Amp_6p22.3	0.939	1
CTNNB1	Del_13q14.2	0.939	1
EP300	22q-Del	0.939	1
FBXW7	Del_9p23	0.939	1
IDH1	Del_22q13.32	0.939	1
POTEG	20p-Amp	0.939	1
SARNP	Del_22q13.32	0.939	1
ZBTB7B	Amp_19q13.43	0.939	1
ZNF486	20p-Amp	0.939	1
CDK12	Del_6p25.3	0.939	1
CDK12	Del_10q23.31	0.939	1
CDK12	Del_16q23.1	0.939	1
CDKN2AIPNL	Amp_13q22.1	0.939	1
EXOSC10	Del_13q14.2	0.939	1
IL10RB	Amp_6p22.3	0.939	1
RBM10	Del_22q13.32	0.939	1
STK32B	Amp_19q13.43	0.939	1
TAF11	Amp_6p22.3	0.939	1
TXNIP	Del_17p12	0.939	1
CDH1	Del_13q14.2	0.939	1
CNOT3	Amp_19q13.43	0.939	1
FUS	20p-Amp	0.939	1
ZNF773	Amp_19q13.43	0.939	1
1q-Amp	Del_13q14.2	0.939	1
20p-Amp	Del_2q22.1	0.939	1
20q-Amp	11q-Del	0.939	1
20q-Amp	5q-Del	0.939	1
5p-Amp	Amp_19q12	0.939	1
11p-Del	22q-Del	0.939	1
14q-Del	Del_6p25.3	0.939	1
Amp_3q26.33	Del_16p13.3	0.939	1
Amp_6q21	Amp_19q13.43	0.939	1
Del_2q22.1	Del_8p23.3	0.939	1
ASXL2	C3orf70	0.94	1
ASXL2	SLC9A4	0.94	1
ASXL2	CUL1	0.94	1
BTG2	KPTN	0.94	1
BTG2	PTTG1IP	0.94	1
C12orf43	COPZ2	0.94	1
C12orf43	PTTG1IP	0.94	1
COPZ2	HIST1H2AG	0.94	1
COPZ2	TGIF2LX	0.94	1
COPZ2	CCNE2	0.94	1
COPZ2	IL10RB	0.94	1
COPZ2	LETMD1	0.94	1
COPZ2	PHLDA3	0.94	1
COPZ2	SNRPB	0.94	1
COPZ2	TAF11	0.94	1
COPZ2	19p-Del	0.94	1
CSMD3	HORMAD1	0.94	1
CSMD3	PSMC6	0.94	1
CSMD3	STK32B	0.94	1
CTNNB1	Amp_7p11.2	0.94	1
DIAPH2	ZFP36L1	0.94	1
EP300	Amp_3p25.2	0.94	1
ERBB3	RPTN	0.94	1
ERCC2	PARD3	0.94	1
ERCC2	ARID1B	0.94	1
ERCC2	7p-Amp	0.94	1
FBXW7	HIST1H3B	0.94	1
FBXW7	Del_Xq21.33	0.94	1
GPS2	5p-Amp	0.94	1
HIST1H2AG	KPTN	0.94	1
HIST1H2AG	PTTG1IP	0.94	1
HIST1H3B	PKHD1	0.94	1
HIST1H3B	ATAD5	0.94	1
HIST1H3B	Amp_16p13.2	0.94	1
KLF5	PPARGC1A	0.94	1
KPTN	NHLRC1	0.94	1
KPTN	TGIF2LX	0.94	1
KPTN	CCNE2	0.94	1
KPTN	IL10RB	0.94	1
KPTN	LETMD1	0.94	1
KPTN	PHLDA3	0.94	1
KPTN	SNRPB	0.94	1
KPTN	TAF11	0.94	1
KPTN	SCARF2	0.94	1
KPTN	19p-Del	0.94	1
NHLRC1	PTTG1IP	0.94	1
PLCXD3	CDKN2AIPNL	0.94	1
PTTG1IP	TGIF2LX	0.94	1
PTTG1IP	CCNE2	0.94	1
PTTG1IP	IL10RB	0.94	1
PTTG1IP	LETMD1	0.94	1
PTTG1IP	PHLDA3	0.94	1
PTTG1IP	SNRPB	0.94	1
PTTG1IP	TAF11	0.94	1
PTTG1IP	SCARF2	0.94	1
PTTG1IP	19p-Del	0.94	1
SHANK1	Amp_8p11.21	0.94	1
SHANK1	Amp_19q13.43	0.94	1
TP53	CDKN2AIPNL	0.94	1
ZFP36L1	FAM47C	0.94	1
ZFP36L2	Amp_17q12	0.94	1
AGR3	CDKN2AIPNL	0.94	1
AGR3	9q-Del	0.94	1
CDKN2AIPNL	RBP2	0.94	1
CDKN2AIPNL	ADC	0.94	1
CDKN2AIPNL	DAZAP1	0.94	1
DCDC1	Amp_7p11.2	0.94	1
FAT1	Amp_1p34.2	0.94	1
ITGA4	7p-Amp	0.94	1
MED13	GNA13	0.94	1
NEK11	4q-Del	0.94	1
PARD3	PPARGC1A	0.94	1
PARD3	SSH3	0.94	1
PARD3	TXNIP	0.94	1
THRAP3	SPTAN1	0.94	1
TRERF1	Amp_1p34.2	0.94	1
TXNIP	7p-Amp	0.94	1
ZNF750	SPTAN1	0.94	1
ARID1B	DNAH6	0.94	1
BAP1	Amp_7p11.2	0.94	1
DAZAP1	9q-Del	0.94	1
DAZAP1	Del_5q12.1	0.94	1
FAM47C	Amp_1p34.2	0.94	1
FUT5	Amp_20q11.21	0.94	1
HLA-A	Del_17p12	0.94	1
TMCO4	Amp_16p13.2	0.94	1
11p-Del	Amp_3p25.2	0.94	1
4q-Del	Amp_3p25.2	0.94	1
9p-Del	Amp_19q13.43	0.94	1
Amp_8p11.23	Amp_19q12	0.94	1
Amp_20q11.21	Del_11p15.5	0.94	1
Del_16q23.1	Del_17p12	0.94	1
BTG2	Del_11q25	0.941	1
CREBBP	HIST1H2AG	0.941	1
CREBBP	NHLRC1	0.941	1
CREBBP	TGIF2LX	0.941	1
CREBBP	19p-Del	0.941	1
ERBB2	NFE2L2	0.941	1
ERBB3	20q-Amp	0.941	1
IDH1	METTL3	0.941	1
METTL3	SARNP	0.941	1
METTL3	FUS	0.941	1
METTL3	Amp_1q21.3	0.941	1
NF1	ARID2	0.941	1
NHLRC1	TBC1D12	0.941	1
NHLRC1	Del_11q25	0.941	1
PIGS	RHOA	0.941	1
PIGS	SHANK1	0.941	1
POTEG	RHOA	0.941	1
POTEG	SHANK1	0.941	1
SARNP	SHANK1	0.941	1
SHANK1	ZNF486	0.941	1
SHANK1	Amp_1q21.3	0.941	1
SHANK1	Del_5q12.1	0.941	1
TBC1D12	TGIF2LX	0.941	1
TBC1D12	CCNE2	0.941	1
TBC1D12	IL10RB	0.941	1
TBC1D12	PHLDA3	0.941	1
TBC1D12	TAF11	0.941	1
TBC1D12	19p-Del	0.941	1
TGIF2LX	Del_6q27	0.941	1
TP53	UBA52	0.941	1
TSC1	DLX6	0.941	1
ATAD5	Amp_3p25.2	0.941	1
CDKN2AIPNL	Del_22q13.32	0.941	1
HFM1	3q-Amp	0.941	1
HFM1	Del_15q13.1	0.941	1
ITGA4	Del_8p21.3	0.941	1
KDM5A	3q-Amp	0.941	1
KDM5A	Del_3p14.2	0.941	1
PHLDA3	Amp_7p21.1	0.941	1
SCARF2	Del_6q27	0.941	1
SCARF2	Del_11q25	0.941	1
SPTAN1	11p-Del	0.941	1
16p-Del	Amp_19q12	0.941	1
Amp_1q21.3	Del_2q22.1	0.941	1
Amp_4p16.3	Del_15q13.1	0.941	1
Amp_20q11.21	Del_3p14.2	0.941	1
BTG2	PSIP1	0.942	1
BTG2	15q-Del	0.942	1
C12orf43	PSIP1	0.942	1
C12orf43	15q-Del	0.942	1
C12orf43	Amp_20q11.21	0.942	1
CDKN2A	CTNNB1	0.942	1
CDKN2A	NFE2L3	0.942	1
CDKN2A	CASP8	0.942	1
CDKN2A	WAC	0.942	1
CDKN2A	ZNF750	0.942	1
CDKN2A	EPS8	0.942	1
CFHR4	CREBBP	0.942	1
CFHR4	TBC1D12	0.942	1
CNNM4	ITGA4	0.942	1
CNNM4	DNAH6	0.942	1
CREBBP	MBD1	0.942	1
CSMD3	TBC1D12	0.942	1
EP300	EPHA2	0.942	1
EP300	HFM1	0.942	1
ERCC2	GTF2I	0.942	1
ERCC2	ITGA4	0.942	1
ERCC2	SSH3	0.942	1
FOXQ1	RHOB	0.942	1
GPR50	RHOB	0.942	1
GPS2	NEK11	0.942	1
GPS2	TXNIP	0.942	1
GTF2I	TFG	0.942	1
HIST1H2AG	RBM26	0.942	1
IDH1	RB1	0.942	1
KLF5	HLA-A	0.942	1
MIPOL1	NEK11	0.942	1
NHLRC1	PSIP1	0.942	1
NHLRC1	DENND5B	0.942	1
PIGS	RB1	0.942	1
PIGS	9p-Del	0.942	1
PLCXD3	4p-Del	0.942	1
POTEG	RB1	0.942	1
PSIP1	TGIF2LX	0.942	1
PSIP1	CCNE2	0.942	1
PSIP1	19p-Del	0.942	1
PSIP1	Del_2q37.1	0.942	1
RB1	OR10Z1	0.942	1
RB1	FUS	0.942	1
RHOB	DCDC1	0.942	1
RHOB	IKZF2	0.942	1
RHOB	BAP1	0.942	1
RHOB	EPS8	0.942	1
TBC1D12	CTCF	0.942	1
TBC1D12	DPYS	0.942	1
TGIF2LX	DENND5B	0.942	1
TGIF2LX	RBM26	0.942	1
TP53	Del_2q22.1	0.942	1
ZNF511	PPARGC1A	0.942	1
ZNF511	TXNIP	0.942	1
ZNF511	Del_4q22.1	0.942	1
CCNE2	RBM26	0.942	1
CCNE2	15q-Del	0.942	1
CDK12	ADC	0.942	1
CDK12	DAZAP1	0.942	1
DENND5B	LETMD1	0.942	1
DENND5B	SCARF2	0.942	1
DENND5B	19p-Del	0.942	1
DPYS	Del_6q27	0.942	1
EPHA2	11p-Del	0.942	1
GLTP	Amp_3q26.33	0.942	1
GLTP	Amp_11q13.3	0.942	1
HFM1	Amp_3p25.2	0.942	1
IL10RB	RBM26	0.942	1
IL10RB	7q-Amp	0.942	1
IL10RB	15q-Del	0.942	1
LETMD1	15q-Del	0.942	1
MBD1	Del_6q27	0.942	1
NKX2-2	PPARGC1A	0.942	1
PARD3	ZBTB47	0.942	1
PARD3	HLA-A	0.942	1
RBM26	SNRPB	0.942	1
RBM26	TAF11	0.942	1
RBM26	SCARF2	0.942	1
RBP2	14q-Del	0.942	1
RBP2	4p-Del	0.942	1
RBP2	Del_13q14.2	0.942	1
TAF11	7q-Amp	0.942	1
TAF11	15q-Del	0.942	1
TFG	TXNIP	0.942	1
TFG	DNAH6	0.942	1
TFG	Del_4q22.1	0.942	1
UBA52	Amp_11q13.3	0.942	1
UGP2	9p-Del	0.942	1
USP28	Del_11q25	0.942	1
ZBTB47	Amp_3q26.33	0.942	1
ARID1B	20q-Amp	0.942	1
HLA-A	4q-Del	0.942	1
SCARF2	7q-Amp	0.942	1
19q-Amp	Amp_8q22.3	0.942	1
5p-Amp	7p-Amp	0.942	1
15q-Del	19p-Del	0.942	1
15q-Del	Del_2q37.1	0.942	1
8p-Del	Del_12p13.1	0.942	1
Amp_3p25.2	Del_19p13.3	0.942	1
Amp_8q22.3	Del_14q24.1	0.942	1
Del_11q23.3	Del_18q23	0.942	1
ASXL2	SF3B1	0.943	1
ATM	Amp_8q22.3	0.943	1
CSMD3	PTTG1IP	0.943	1
ERBB2	Amp_8p11.21	0.943	1
ERBB2	Amp_17q12	0.943	1
ERBB3	PIGS	0.943	1
ERBB3	OR10Z1	0.943	1
ERBB3	FUS	0.943	1
FGFR3	ZNF773	0.943	1
KDM6A	Amp_8p11.21	0.943	1
METTL3	PSIP1	0.943	1
METTL3	DENND5B	0.943	1
METTL3	RBM26	0.943	1
METTL3	15q-Del	0.943	1
NF1	RBM26	0.943	1
NF1	15q-Del	0.943	1
NF2	STAG2	0.943	1
NFE2L3	5p-Amp	0.943	1
PSIP1	RHOA	0.943	1
PSIP1	SHANK1	0.943	1
PTEN	5p-Amp	0.943	1
RHOA	DENND5B	0.943	1
RHOB	ARID1B	0.943	1
ZBTB7B	Amp_8p11.23	0.943	1
ZFP36L1	8q-Amp	0.943	1
HFM1	OGDH	0.943	1
HFM1	Amp_4p16.3	0.943	1
KDM5A	NCOA1	0.943	1
NCOA1	OGDH	0.943	1
PSMC6	Amp_1q21.3	0.943	1
STK32B	Amp_8p11.23	0.943	1
CNOT3	Del_16p13.3	0.943	1
EPS8	5p-Amp	0.943	1
20p-Amp	Amp_19q13.43	0.943	1
Amp_6q21	Amp_8p11.23	0.943	1
Amp_8q22.3	Del_4q34.2	0.943	1
Amp_11q22.2	Amp_22q12.2	0.943	1
Amp_19q13.43	Del_18q23	0.943	1
ARID1A	Amp_8q22.3	0.944	1
C12orf43	Amp_17q23.3	0.944	1
CFHR4	HIST1H3B	0.944	1
ELF3	HIST1H2AG	0.944	1
ELF3	TGIF2LX	0.944	1
ELF3	CCNE2	0.944	1
ELF3	MED13	0.944	1
ELF3	PHLDA3	0.944	1
EP300	Del_2q22.1	0.944	1
ERBB2	SHANK1	0.944	1
ERBB3	SF3B3	0.944	1
ERBB3	Del_2q37.1	0.944	1
FOXA1	Del_16q23.1	0.944	1
FOXQ1	Del_6p25.3	0.944	1
HIST1H2AG	Amp_17q23.3	0.944	1
HIST1H3B	NF1	0.944	1
HIST1H3B	CTCF	0.944	1
HIST1H3B	MARK2	0.944	1
HIST1H3B	PPARG	0.944	1
NF1	GNA13	0.944	1
NF1	Del_1q32.1	0.944	1
NFE2L2	DDX3X	0.944	1
NFE2L2	Del_7q36.3	0.944	1
NFE2L3	Amp_13q22.1	0.944	1
NHLRC1	Amp_17q23.3	0.944	1
PROS1	TMCO4	0.944	1
PSIP1	Del_16q23.1	0.944	1
PTEN	Del_6p25.3	0.944	1
RHOA	Amp_19q12	0.944	1
RUNX1	Del_16q23.1	0.944	1
RXRA	NAA15	0.944	1
RXRA	NDC80	0.944	1
RXRA	RARG	0.944	1
SF3B1	19q-Amp	0.944	1
SHANK1	Del_13q14.2	0.944	1
TGIF2LX	Amp_17q23.3	0.944	1
TSC1	ZNF773	0.944	1
ZFP36L2	Del_2q34	0.944	1
ATAD5	Amp_1q23.3	0.944	1
ATAD5	Amp_17q23.3	0.944	1
CCNE2	Amp_17q23.3	0.944	1
CDK12	Del_4q34.2	0.944	1
CTCF	TMCO4	0.944	1
CTCF	Del_Xq21.33	0.944	1
DCDC1	Del_6p25.3	0.944	1
DDX3X	MYO16	0.944	1
DPYS	17q-Amp	0.944	1
DPYS	Del_1q32.1	0.944	1
DPYS	Del_Xq21.33	0.944	1
EXOSC10	Del_6p25.3	0.944	1
IKZF2	Amp_13q22.1	0.944	1
KDM5A	Del_8p23.3	0.944	1
LETMD1	Amp_17q23.3	0.944	1
MARK2	TMCO4	0.944	1
MARK2	17q-Amp	0.944	1
MBD1	TMCO4	0.944	1
MYO16	NDC80	0.944	1
MYO16	RARG	0.944	1
NAA15	16p-Del	0.944	1
NAA15	22q-Del	0.944	1
NDC80	16p-Del	0.944	1
NDC80	22q-Del	0.944	1
PPARG	GNA13	0.944	1
PPARG	TMCO4	0.944	1
PPARG	Del_1q32.1	0.944	1
PPARG	Del_Xq21.33	0.944	1
PPP4R1	TMCO4	0.944	1
RARG	16p-Del	0.944	1
USP28	TMCO4	0.944	1
USP28	17q-Amp	0.944	1
USP28	Del_Xq21.33	0.944	1
WAC	Del_16q23.1	0.944	1
BAP1	Amp_13q22.1	0.944	1
BAP1	Del_6p25.3	0.944	1
BAP1	Del_16q23.1	0.944	1
CDH1	Del_16q23.1	0.944	1
DAZAP1	Del_8p23.3	0.944	1
EPS8	Amp_13q22.1	0.944	1
TMCO4	Del_Xp11.3	0.944	1
7q-Amp	Amp_12q15	0.944	1
7q-Amp	Del_6p25.3	0.944	1
10q-Del	Amp_3q26.33	0.944	1
11p-Del	Amp_8p11.21	0.944	1
11p-Del	Del_2q22.1	0.944	1
16p-Del	Del_7q36.3	0.944	1
18q-Del	Del_12p13.1	0.944	1
19p-Del	Amp_17q23.3	0.944	1
4q-Del	Del_11p15.5	0.944	1
6q-Del	Amp_3q26.33	0.944	1
9q-Del	Del_3p14.2	0.944	1
Amp_5p15.33	Amp_8q22.3	0.944	1
Amp_11q13.3	Del_15q13.1	0.944	1
Amp_11q22.2	Del_7q36.3	0.944	1
Amp_12q15	Del_1p36.11	0.944	1
Amp_13q22.1	Del_1p36.11	0.944	1
Amp_16p13.2	Amp_17q23.3	0.944	1
Del_1q32.1	Del_Xp11.3	0.944	1
ATM	ZBTB47	0.945	1
ATM	HLA-A	0.945	1
ATM	UNC93B1	0.945	1
C3orf70	RBM10	0.945	1
C3orf70	SF3B3	0.945	1
COPZ2	Amp_8p11.23	0.945	1
CREBBP	TP53	0.945	1
DIAPH2	CUL1	0.945	1
KPTN	Amp_8p11.23	0.945	1
METTL3	Amp_6p22.3	0.945	1
RHOA	TSC1	0.945	1
SHANK1	TSC1	0.945	1
TP53	Amp_7p21.1	0.945	1
ZFP36L2	SF3B3	0.945	1
ZFP36L2	CNOT1	0.945	1
ACTB	RBM10	0.945	1
ARID2	Del_14q24.1	0.945	1
CPD	RIPK4	0.945	1
CPD	ZNF626	0.945	1
DLX6	3q-Amp	0.945	1
DLX6	Del_15q13.1	0.945	1
HSP90AA1	14q-Del	0.945	1
HSP90AA1	4p-Del	0.945	1
MED13	Del_11p15.5	0.945	1
RBM10	ZNF626	0.945	1
RBM10	3p-Amp	0.945	1
RBM26	Del_9p23	0.945	1
RIPK4	CNOT1	0.945	1
SF3B3	CUL1	0.945	1
TRERF1	3p-Amp	0.945	1
CNOT1	CUL1	0.945	1
CUL1	5q-Del	0.945	1
CUL1	Del_19p13.3	0.945	1
UNC93B1	Del_4q34.2	0.945	1
ZNF185	6q-Del	0.945	1
3p-Amp	11q-Del	0.945	1
4p-Del	Del_9p23	0.945	1
4p-Del	Del_12p13.1	0.945	1
Amp_3q26.33	Amp_20q11.21	0.945	1
Amp_6p22.3	Del_4q22.1	0.945	1
Amp_7p21.1	Amp_13q22.1	0.945	1
Amp_8q22.3	Amp_17q12	0.945	1
ASXL2	GPS2	0.946	1
ASXL2	SF1	0.946	1
ATM	STAG2	0.946	1
ATM	SPTAN1	0.946	1
CDKN2A	AGR3	0.946	1
CDKN2A	RBP2	0.946	1
CFHR4	ELF3	0.946	1
CNNM4	Amp_17q12	0.946	1
CSMD3	RBM26	0.946	1
CTNNB1	CNOT3	0.946	1
DIAPH2	Del_10q23.31	0.946	1
ELF3	CTCF	0.946	1
ELF3	DPYS	0.946	1
ELF3	MBD1	0.946	1
EP300	GPS2	0.946	1
EP300	ZNF511	0.946	1
EP300	NKX2-2	0.946	1
FOXA1	CNOT3	0.946	1
FOXQ1	HORMAD1	0.946	1
FOXQ1	PSMC6	0.946	1
FOXQ1	CNOT3	0.946	1
FOXQ1	ZNF773	0.946	1
FOXQ1	Amp_6q21	0.946	1
GPR50	STK32B	0.946	1
GPR50	CNOT3	0.946	1
GPS2	11p-Del	0.946	1
GTF2I	Del_4q22.1	0.946	1
GTF2I	Del_10q23.31	0.946	1
HORMAD1	NFE2L3	0.946	1
HORMAD1	PTEN	0.946	1
HORMAD1	BAP1	0.946	1
HORMAD1	CDH1	0.946	1
HORMAD1	EPS8	0.946	1
HORMAD1	Amp_6p22.3	0.946	1
KRAS	NF2	0.946	1
KRAS	STK32B	0.946	1
KRAS	CNOT3	0.946	1
KRAS	ZNF773	0.946	1
NF2	THRAP3	0.946	1
NF2	ZNF750	0.946	1
NF2	BAP1	0.946	1
NF2	CDH1	0.946	1
NF2	EPS8	0.946	1
NFE2L3	CNOT3	0.946	1
NFE2L3	Amp_6q21	0.946	1
PTEN	ZBTB7B	0.946	1
PTEN	ZNF773	0.946	1
RHOB	ADC	0.946	1
RHOB	DAZAP1	0.946	1
RUNX1	STK32B	0.946	1
RUNX1	CNOT3	0.946	1
RUNX1	Amp_6q21	0.946	1
TBC1D12	22q-Del	0.946	1
ZBTB7B	DCDC1	0.946	1
ZBTB7B	THRAP3	0.946	1
ZBTB7B	BAP1	0.946	1
ZBTB7B	EPS8	0.946	1
CASP8	PSMC6	0.946	1
CASP8	STK32B	0.946	1
CASP8	CNOT3	0.946	1
CASP8	Amp_6q21	0.946	1
DCDC1	PSMC6	0.946	1
DCDC1	STK32B	0.946	1
DLX6	Amp_3p25.2	0.946	1
DPYS	Amp_17q23.3	0.946	1
DPYS	Del_3p14.2	0.946	1
EXOSC10	PSMC6	0.946	1
EXOSC10	STK32B	0.946	1
EXOSC10	Amp_6q21	0.946	1
IKZF2	PSMC6	0.946	1
IKZF2	STK32B	0.946	1
IKZF2	CNOT3	0.946	1
NEK11	Amp_11q13.3	0.946	1
NKX2-2	Amp_8q22.3	0.946	1
PPARGC1A	Del_4q22.1	0.946	1
PPARGC1A	Del_10q23.31	0.946	1
PSMC6	WAC	0.946	1
PSMC6	BAP1	0.946	1
PSMC6	1q-Amp	0.946	1
STK32B	THRAP3	0.946	1
STK32B	BAP1	0.946	1
STK32B	EPS8	0.946	1
THRAP3	CNOT3	0.946	1
THRAP3	ZNF773	0.946	1
TRERF1	Amp_3q26.33	0.946	1
TRERF1	Del_10q23.31	0.946	1
TXNIP	Del_4q22.1	0.946	1
WAC	ZNF773	0.946	1
ZNF750	CNOT3	0.946	1
ZNF750	ZNF773	0.946	1
ZNF750	Amp_6q21	0.946	1
CDH1	ZNF773	0.946	1
CNOT1	Amp_3q26.33	0.946	1
DNAH6	Amp_11q13.3	0.946	1
DNAH6	Del_10q23.31	0.946	1
EPS8	ZNF773	0.946	1
FAM47C	Amp_11q13.3	0.946	1
FUT5	Amp_3p25.2	0.946	1
ZNF773	1q-Amp	0.946	1
7p-Amp	Del_4q22.1	0.946	1
11p-Del	Amp_3q26.33	0.946	1
11p-Del	Del_10q23.31	0.946	1
16p-Del	Del_11q25	0.946	1
22q-Del	Del_11q25	0.946	1
5q-Del	Amp_8p11.21	0.946	1
9q-Del	Amp_1q21.3	0.946	1
9q-Del	Del_12p13.1	0.946	1
Amp_1q23.3	Del_16q23.1	0.946	1
ARID1A	ERBB2	0.947	1
ARID1A	FBXW7	0.947	1
C3orf70	IDH1	0.947	1
C3orf70	PIGS	0.947	1
C3orf70	SARNP	0.947	1
C3orf70	FUS	0.947	1
COPZ2	NRAS	0.947	1
COPZ2	GLTP	0.947	1
COPZ2	ZBTB47	0.947	1
COPZ2	HLA-A	0.947	1
COPZ2	UNC93B1	0.947	1
CSMD3	NF1	0.947	1
ERCC2	Del_4q34.2	0.947	1
GTF2I	HSP90AA1	0.947	1
GTF2I	ASXL1	0.947	1
HIST1H3B	20q-Amp	0.947	1
HRAS	POTEG	0.947	1
IDH1	SLC9A4	0.947	1
KPTN	NRAS	0.947	1
KPTN	GLTP	0.947	1
KPTN	ZBTB47	0.947	1
KPTN	HLA-A	0.947	1
KPTN	UNC93B1	0.947	1
NRAS	PTTG1IP	0.947	1
NRAS	ASXL1	0.947	1
PIGS	RIPK4	0.947	1
PKHD1	NCOA1	0.947	1
POTEG	SLC9A4	0.947	1
PTTG1IP	GLTP	0.947	1
PTTG1IP	UBA52	0.947	1
PTTG1IP	ZBTB47	0.947	1
PTTG1IP	HLA-A	0.947	1
PTTG1IP	UNC93B1	0.947	1
RB1	Amp_6p22.3	0.947	1
SARNP	RIPK4	0.947	1
SARNP	CUL1	0.947	1
TP53	ZNF180	0.947	1
TP53	DDX3X	0.947	1
ZFP36L2	OR10Z1	0.947	1
ZNF486	RIPK4	0.947	1
ZNF486	ZNF626	0.947	1
ZNF486	3p-Amp	0.947	1
ACTB	UGP2	0.947	1
ACTB	FUS	0.947	1
ATAD5	HFM1	0.947	1
ATAD5	KDM5A	0.947	1
DDX3X	Amp_3p25.2	0.947	1
FAT1	TMCO4	0.947	1
HSP90AA1	PPARGC1A	0.947	1
HSP90AA1	ZBTB47	0.947	1
HSP90AA1	HLA-A	0.947	1
HSP90AA1	Amp_1q23.3	0.947	1
ITGA4	Del_12p13.1	0.947	1
MBD1	Amp_10p14	0.947	1
MED13	OGDH	0.947	1
NEK11	ASXL1	0.947	1
OR10Z1	ZNF626	0.947	1
PPARGC1A	ASXL1	0.947	1
PPARGC1A	Del_12p13.1	0.947	1
RIPK4	UGP2	0.947	1
TXNIP	ASXL1	0.947	1
UBA52	ASXL1	0.947	1
UGP2	3p-Amp	0.947	1
ADC	Amp_1q23.3	0.947	1
ASXL1	DNAH6	0.947	1
DAZAP1	Amp_1q23.3	0.947	1
SPTAN1	3q-Amp	0.947	1
TMCO4	20q-Amp	0.947	1
UNC93B1	Del_12p13.1	0.947	1
3q-Amp	Del_17p12	0.947	1
7p-Amp	Amp_8p11.21	0.947	1
8q-Amp	Amp_7p11.2	0.947	1
Amp_1q23.3	Amp_6q21	0.947	1
Amp_1q23.3	Del_9p23	0.947	1
Amp_19q13.43	Del_9p23	0.947	1
Del_1q32.1	Del_2q37.1	0.947	1
Del_11q23.3	Del_Xq21.33	0.947	1
ASXL2	Amp_16p13.2	0.948	1
BTG2	EPHA2	0.948	1
BTG2	OGDH	0.948	1
BTG2	Amp_4p16.3	0.948	1
C12orf43	EPHA2	0.948	1
C12orf43	NCOA1	0.948	1
C12orf43	OGDH	0.948	1
C3orf70	FAT1	0.948	1
CDKN1A	Amp_11q22.2	0.948	1
CDKN2A	Del_16q23.1	0.948	1
CNNM4	NAA15	0.948	1
CNNM4	19q-Amp	0.948	1
CNNM4	Amp_4q13.3	0.948	1
CTNNB1	Amp_22q12.2	0.948	1
EP300	ERCC2	0.948	1
ERBB3	Amp_5p15.33	0.948	1
FBXW7	FUT5	0.948	1
FBXW7	ZNF185	0.948	1
FGFR3	TBC1D12	0.948	1
GPS2	DDX3X	0.948	1
GPS2	NAA15	0.948	1
HIST1H2AG	KDM5A	0.948	1
HORMAD1	6q-Del	0.948	1
HORMAD1	Del_15q13.1	0.948	1
HRAS	FAT1	0.948	1
HRAS	20q-Amp	0.948	1
MIPOL1	RARG	0.948	1
MIPOL1	Amp_4q13.3	0.948	1
NF2	10q-Del	0.948	1
NFE2L2	Del_19p13.3	0.948	1
PIK3CA	FAT1	0.948	1
PKHD1	FUT5	0.948	1
PKHD1	Amp_17q12	0.948	1
PKHD1	Del_5q12.1	0.948	1
PROS1	CDK12	0.948	1
RPTN	NKX2-2	0.948	1
RPTN	TFG	0.948	1
RUNX1	Amp_22q12.2	0.948	1
RXRA	Del_19p13.3	0.948	1
SF1	NAA15	0.948	1
SF1	RARG	0.948	1
SF1	19q-Amp	0.948	1
SF3B1	5q-Del	0.948	1
TGIF2LX	KDM5A	0.948	1
TGIF2LX	NCOA1	0.948	1
TP53	14q-Del	0.948	1
TSC1	11p-Del	0.948	1
ZFP36L1	ARID2	0.948	1
ZNF511	DDX3X	0.948	1
ZNF511	NDC80	0.948	1
ATAD5	DLX6	0.948	1
CASP8	Amp_22q12.2	0.948	1
CCNE2	HFM1	0.948	1
CCNE2	KDM5A	0.948	1
CCNE2	NCOA1	0.948	1
CCNE2	OGDH	0.948	1
CDK12	CTCF	0.948	1
CDK12	USP28	0.948	1
DDX3X	NKX2-2	0.948	1
DDX3X	TFG	0.948	1
DLX6	Amp_16p13.2	0.948	1
EPHA2	LETMD1	0.948	1
EPHA2	SCARF2	0.948	1
EPHA2	19p-Del	0.948	1
HFM1	IL10RB	0.948	1
IL10RB	KDM5A	0.948	1
IL10RB	NCOA1	0.948	1
KDM5A	TAF11	0.948	1
KDM5A	19p-Del	0.948	1
LETMD1	NCOA1	0.948	1
MBD1	4p-Del	0.948	1
MED13	FUT5	0.948	1
MED13	ZNF185	0.948	1
NAA15	NKX2-2	0.948	1
NAA15	TFG	0.948	1
NCOA1	SNRPB	0.948	1
NCOA1	TAF11	0.948	1
NKX2-2	19q-Amp	0.948	1
RIPK4	20q-Amp	0.948	1
SNRPB	OGDH	0.948	1
STK32B	Del_15q13.1	0.948	1
TFG	19q-Amp	0.948	1
TFG	Amp_4q13.3	0.948	1
WAC	Amp_22q12.2	0.948	1
BAP1	Amp_22q12.2	0.948	1
FUT5	Del_11p15.5	0.948	1
OGDH	SCARF2	0.948	1
ZNF773	10q-Del	0.948	1
ZNF773	Del_15q13.1	0.948	1
20q-Amp	Amp_19q13.43	0.948	1
20q-Amp	Del_8p21.3	0.948	1
3p-Amp	Amp_10p14	0.948	1
3q-Amp	Amp_6q21	0.948	1
10q-Del	Amp_6q21	0.948	1
16p-Del	Del_19p13.3	0.948	1
6q-Del	Amp_6q21	0.948	1
Amp_6q21	Del_15q13.1	0.948	1
Amp_7p21.1	Del_8p21.3	0.948	1
Del_8p21.3	Del_11q23.3	0.948	1
ATM	PPARGC1A	0.949	1
ATM	SSH3	0.949	1
BTG2	Amp_3p25.2	0.949	1
CDKN1A	ZNF511	0.949	1
COPZ2	Amp_11q13.3	0.949	1
CSMD3	ELF3	0.949	1
CSMD3	Amp_6p22.3	0.949	1
EP300	RB1	0.949	1
EP300	DAZAP1	0.949	1
ERBB3	Del_8p21.3	0.949	1
FOXA1	Del_22q13.32	0.949	1
GTF2I	Del_8p23.3	0.949	1
HIST1H3B	ZFP36L1	0.949	1
HIST1H3B	Amp_1p34.2	0.949	1
HORMAD1	Amp_3q26.33	0.949	1
KPTN	Amp_3q26.33	0.949	1
KPTN	Del_10q23.31	0.949	1
METTL3	TBC1D12	0.949	1
METTL3	Del_6q27	0.949	1
MIPOL1	5q-Del	0.949	1
PIK3CA	Del_3p14.2	0.949	1
PKHD1	CDK12	0.949	1
PSIP1	Amp_1p34.2	0.949	1
RHOA	TBC1D12	0.949	1
RPTN	4q-Del	0.949	1
RUNX1	Del_22q13.32	0.949	1
SHANK1	Del_6q27	0.949	1
TGIF2LX	Amp_3p25.2	0.949	1
ZBTB7B	Amp_11q13.3	0.949	1
ZFP36L1	Del_1q32.1	0.949	1
AGR3	11p-Del	0.949	1
ARID2	DENND5B	0.949	1
ARID2	Del_1q32.1	0.949	1
CCNE2	Amp_3p25.2	0.949	1
CDK12	Amp_16p13.2	0.949	1
CDKN2AIPNL	18q-Del	0.949	1
CDKN2AIPNL	Del_14q24.1	0.949	1
DDX3X	PARD3	0.949	1
DDX3X	ARID1B	0.949	1
DDX3X	7p-Amp	0.949	1
DENND5B	Amp_1p34.2	0.949	1
DENND5B	Del_22q13.32	0.949	1
NAA15	ARID1B	0.949	1
NDC80	7p-Amp	0.949	1
NDC80	4q-Del	0.949	1
NEK11	Del_4q34.2	0.949	1
PSMC6	Amp_11q13.3	0.949	1
PSMC6	Del_10q23.31	0.949	1
RARG	ARID1B	0.949	1
STK32B	Del_10q23.31	0.949	1
TFG	8q-Amp	0.949	1
DAZAP1	17p-Del	0.949	1
ZNF773	Del_10q23.31	0.949	1
19q-Amp	18q-Del	0.949	1
7p-Amp	Del_7q36.3	0.949	1
14q-Del	Amp_16p13.2	0.949	1
Amp_1q21.3	Del_2q37.1	0.949	1
Amp_3q26.33	Del_4q22.1	0.949	1
Amp_5p15.33	Amp_20q11.21	0.949	1
Amp_6q21	Del_10q23.31	0.949	1
Del_7q36.3	Del_14q24.1	0.949	1
ARID1A	Amp_4q13.3	0.95	1
CDKN2A	6q-Del	0.95	1
CSMD3	5p-Amp	0.95	1
ELF3	20q-Amp	0.95	1
EP300	FOXQ1	0.95	1
EP300	PTEN	0.95	1
EP300	CASP8	0.95	1
EP300	IKZF2	0.95	1
EP300	BAP1	0.95	1
ERBB2	Amp_1p34.2	0.95	1
ERBB3	Amp_20q11.21	0.95	1
ERCC2	Del_8p21.3	0.95	1
FOXQ1	Amp_1q21.3	0.95	1
HIST1H3B	Del_2q22.1	0.95	1
METTL3	KDM5A	0.95	1
METTL3	OGDH	0.95	1
METTL3	6q-Del	0.95	1
PLCXD3	Amp_22q12.2	0.95	1
PROS1	8p-Del	0.95	1
PROS1	Del_8p21.3	0.95	1
RHOA	EPHA2	0.95	1
RHOA	HFM1	0.95	1
RHOA	OGDH	0.95	1
RHOB	3q-Amp	0.95	1
SARNP	Amp_10p14	0.95	1
SF3B1	16p-Del	0.95	1
SHANK1	EPHA2	0.95	1
SHANK1	NCOA1	0.95	1
SHANK1	OGDH	0.95	1
STAG2	DENND5B	0.95	1
TP53	Amp_1q23.3	0.95	1
ZNF180	Amp_5p15.33	0.95	1
AGR3	Amp_22q12.2	0.95	1
AGR3	Del_9p21.3	0.95	1
CDKN2AIPNL	DLX6	0.95	1
CDKN2AIPNL	FUT5	0.95	1
CDKN2AIPNL	ZNF185	0.95	1
IKZF2	Amp_1q21.3	0.95	1
MARK2	8p-Del	0.95	1
MARK2	Del_8p21.3	0.95	1
MBD1	8p-Del	0.95	1
MBD1	Del_8p21.3	0.95	1
OR10Z1	Del_14q24.1	0.95	1
PARD3	Amp_22q12.2	0.95	1
SLC9A4	Amp_19q13.43	0.95	1
UBA52	Del_2q34	0.95	1
GNA13	Amp_8p11.21	0.95	1
OGDH	Amp_1q23.3	0.95	1
TMCO4	Amp_8p11.21	0.95	1
TMCO4	Del_2q22.1	0.95	1
3p-Amp	Amp_19q13.43	0.95	1
7p-Amp	Amp_22q12.2	0.95	1
7q-Amp	Amp_8p11.23	0.95	1
9p-Del	Del_8p23.3	0.95	1
Amp_7p21.1	Del_2q22.1	0.95	1
ARID1A	TMCO4	0.951	1
ASXL2	ITGA4	0.951	1
ASXL2	PPARGC1A	0.951	1
ATM	DIAPH2	0.951	1
ATM	KPTN	0.951	1
ATM	CPD	0.951	1
ATM	FAM47C	0.951	1
BTG2	SPTAN1	0.951	1
BTG2	Del_8p21.3	0.951	1
C3orf70	DENND5B	0.951	1
CDKN2A	ASXL1	0.951	1
DIAPH2	UBA52	0.951	1
DIAPH2	HLA-A	0.951	1
DIAPH2	UNC93B1	0.951	1
EP300	4q-Del	0.951	1
ERBB3	Del_16p13.3	0.951	1
HIST1H2AG	Amp_7p11.2	0.951	1
HRAS	DENND5B	0.951	1
KDM6A	Del_9p21.3	0.951	1
KPTN	Del_4q34.2	0.951	1
NF1	ZNF185	0.951	1
NRAS	CNOT1	0.951	1
PLCXD3	8q-Amp	0.951	1
PLCXD3	Del_18q23	0.951	1
PSIP1	ZFP36L2	0.951	1
PSIP1	ZNF626	0.951	1
STAG2	9p-Del	0.951	1
TGIF2LX	SPTAN1	0.951	1
TP53	Amp_13q22.1	0.951	1
TP53	Del_10q23.31	0.951	1
ACTB	15q-Del	0.951	1
AGR3	Del_18q23	0.951	1
CPD	UBA52	0.951	1
CPD	ZBTB47	0.951	1
CPD	HLA-A	0.951	1
CPD	UNC93B1	0.951	1
DENND5B	CUL1	0.951	1
IL10RB	Del_8p21.3	0.951	1
LETMD1	SPTAN1	0.951	1
PHLDA3	SPTAN1	0.951	1
PHLDA3	Amp_7p11.2	0.951	1
RBM10	UBA52	0.951	1
RBM10	HLA-A	0.951	1
RBM26	SLC9A4	0.951	1
RBP2	8q-Amp	0.951	1
SF3B3	HLA-A	0.951	1
SLC9A4	15q-Del	0.951	1
SSH3	Amp_17q12	0.951	1
TAF11	Amp_7p11.2	0.951	1
TRERF1	UBA52	0.951	1
UBA52	FAM47C	0.951	1
ZNF626	7q-Amp	0.951	1
ZNF626	8p-Del	0.951	1
FAM47C	UNC93B1	0.951	1
OGDH	SPTAN1	0.951	1
TMCO4	Amp_5p15.33	0.951	1
3p-Amp	15q-Del	0.951	1
8q-Amp	Del_17p12	0.951	1
4q-Del	Del_9p21.3	0.951	1
Amp_1q21.3	Amp_17q12	0.951	1
Amp_8p11.23	Del_11p15.5	0.951	1
Amp_13q22.1	Del_14q24.1	0.951	1
Amp_17q12	Del_13q14.2	0.951	1
Del_6p25.3	Del_11p15.5	0.951	1
Del_14q24.1	Del_16q23.1	0.951	1
ARID1A	SF3B3	0.952	1
ATM	PSMC6	0.952	1
CDKN2A	CTCF	0.952	1
CDKN2A	DPYS	0.952	1
CDKN2A	MBD1	0.952	1
CFHR4	RHOB	0.952	1
ERBB3	FOXA1	0.952	1
ERCC2	Amp_7p11.2	0.952	1
FBXW7	NF2	0.952	1
FBXW7	CNOT3	0.952	1
FGFR3	19q-Amp	0.952	1
GTF2I	IDH1	0.952	1
GTF2I	SARNP	0.952	1
GTF2I	ZNF486	0.952	1
GTF2I	OR10Z1	0.952	1
IDH1	NEK11	0.952	1
IDH1	PPARGC1A	0.952	1
KDM6A	TP53	0.952	1
NF1	OGDH	0.952	1
NF1	Amp_4p16.3	0.952	1
NF1	Amp_17q23.3	0.952	1
NF1	Del_3p14.2	0.952	1
NF2	Amp_16p13.2	0.952	1
PIGS	DNAH6	0.952	1
PIGS	8p-Del	0.952	1
PKHD1	PSMC6	0.952	1
PKHD1	CNOT3	0.952	1
PKHD1	ZNF773	0.952	1
POTEG	NEK11	0.952	1
RHOB	DPYS	0.952	1
RHOB	MARK2	0.952	1
RHOB	PPP4R1	0.952	1
RHOB	9q-Del	0.952	1
RHOB	Amp_3p25.2	0.952	1
RPTN	Amp_8p11.23	0.952	1
SARNP	ITGA4	0.952	1
SARNP	SSH3	0.952	1
SARNP	TXNIP	0.952	1
SARNP	DNAH6	0.952	1
STAG2	ZNF180	0.952	1
ZBTB7B	ATAD5	0.952	1
ZBTB7B	MED13	0.952	1
ZNF486	ITGA4	0.952	1
ZNF486	TXNIP	0.952	1
ATAD5	STK32B	0.952	1
ATAD5	ZNF773	0.952	1
ATAD5	Amp_6q21	0.952	1
CDK12	RBM10	0.952	1
DDX3X	Amp_8p11.23	0.952	1
ITGA4	OR10Z1	0.952	1
ITGA4	UGP2	0.952	1
ITGA4	FUS	0.952	1
MED13	PSMC6	0.952	1
MED13	STK32B	0.952	1
MED13	CNOT3	0.952	1
NDC80	Del_16p13.3	0.952	1
OR10Z1	TXNIP	0.952	1
OR10Z1	DNAH6	0.952	1
PPARGC1A	FUS	0.952	1
PPP4R1	Del_9p23	0.952	1
PSMC6	Del_4q34.2	0.952	1
RBM10	14q-Del	0.952	1
STK32B	Amp_16p13.2	0.952	1
STK32B	Del_4q34.2	0.952	1
UGP2	8p-Del	0.952	1
DNAH6	FUS	0.952	1
GNA13	TMCO4	0.952	1
GNA13	Del_Xq21.33	0.952	1
TMCO4	Del_Xq21.33	0.952	1
17q-Amp	Del_1q32.1	0.952	1
17q-Amp	Del_Xq21.33	0.952	1
19q-Amp	Amp_8p11.23	0.952	1
20p-Amp	Amp_7p21.1	0.952	1
3p-Amp	Amp_8p11.21	0.952	1
17p-Del	Del_13q14.2	0.952	1
4q-Del	Del_9p23	0.952	1
Amp_4q13.3	Amp_8p11.23	0.952	1
Amp_5p15.33	Del_2q34	0.952	1
Amp_6q21	Amp_16p13.2	0.952	1
Del_2q22.1	Del_17p12	0.952	1
Del_5q12.1	Del_11q23.3	0.952	1
Del_9p23	Del_Xp11.3	0.952	1
BTG2	Del_6p25.3	0.953	1
C12orf43	METTL3	0.953	1
C12orf43	Del_6p25.3	0.953	1
C12orf43	Del_16q23.1	0.953	1
CFHR4	HORMAD1	0.953	1
CFHR4	NF2	0.953	1
CFHR4	ZBTB7B	0.953	1
CFHR4	STK32B	0.953	1
CFHR4	Amp_6q21	0.953	1
CTNNB1	RXRA	0.953	1
CTNNB1	SF3B1	0.953	1
CTNNB1	16p-Del	0.953	1
DIAPH2	GTF2I	0.953	1
DIAPH2	PPARGC1A	0.953	1
ERBB2	HIST1H3B	0.953	1
ERBB2	TMCO4	0.953	1
ERCC2	IDH1	0.953	1
ERCC2	PIGS	0.953	1
ERCC2	ZNF486	0.953	1
ERCC2	OR10Z1	0.953	1
ERCC2	8q-Amp	0.953	1
ERCC2	Amp_4q13.3	0.953	1
FOXA1	NFE2L2	0.953	1
FOXA1	SF3B1	0.953	1
FOXQ1	RXRA	0.953	1
FOXQ1	SF3B1	0.953	1
FOXQ1	MYO16	0.953	1
GPR50	MYO16	0.953	1
GPR50	Amp_6p22.3	0.953	1
GPR50	Amp_11q22.2	0.953	1
GTF2I	RB1	0.953	1
GTF2I	TRERF1	0.953	1
HIST1H2AG	METTL3	0.953	1
HIST1H2AG	RHOA	0.953	1
HIST1H2AG	SHANK1	0.953	1
HORMAD1	CTCF	0.953	1
HORMAD1	MBD1	0.953	1
HORMAD1	PPP4R1	0.953	1
KRAS	SF3B1	0.953	1
KRAS	MYO16	0.953	1
METTL3	NHLRC1	0.953	1
METTL3	CCNE2	0.953	1
METTL3	LETMD1	0.953	1
METTL3	SCARF2	0.953	1
NF2	PROS1	0.953	1
NFE2L2	CASP8	0.953	1
NFE2L3	RXRA	0.953	1
NFE2L3	16p-Del	0.953	1
PROS1	CNOT3	0.953	1
PROS1	Amp_6q21	0.953	1
PTEN	22q-Del	0.953	1
PTEN	Amp_6p22.3	0.953	1
RB1	NEK11	0.953	1
RHOA	PHLDA3	0.953	1
RHOA	SNRPB	0.953	1
RHOA	TAF11	0.953	1
RHOA	SCARF2	0.953	1
RUNX1	8q-Amp	0.953	1
RUNX1	16p-Del	0.953	1
RXRA	THRAP3	0.953	1
SHANK1	TGIF2LX	0.953	1
SHANK1	CCNE2	0.953	1
SHANK1	19p-Del	0.953	1
SHANK1	Del_3p14.2	0.953	1
TGIF2LX	Amp_12q15	0.953	1
TSC1	Del_18q23	0.953	1
ZBTB7B	Del_Xp11.3	0.953	1
CTCF	PSMC6	0.953	1
CTCF	STK32B	0.953	1
CTCF	CNOT3	0.953	1
CTCF	ZNF773	0.953	1
DCDC1	16p-Del	0.953	1
DCDC1	22q-Del	0.953	1
DCDC1	Amp_6p22.3	0.953	1
EXOSC10	Amp_6p22.3	0.953	1
FAT1	UNC93B1	0.953	1
IKZF2	MYO16	0.953	1
IL10RB	Del_16q23.1	0.953	1
ITGA4	SF3B3	0.953	1
ITGA4	FAM47C	0.953	1
LETMD1	Amp_12q15	0.953	1
LETMD1	Del_6p25.3	0.953	1
MARK2	CNOT3	0.953	1
MARK2	ZNF773	0.953	1
MED13	Amp_11q13.3	0.953	1
MED13	Del_10q23.31	0.953	1
NEK11	TRERF1	0.953	1
NEK11	CNOT1	0.953	1
PHLDA3	Del_6p25.3	0.953	1
PPARG	CNOT3	0.953	1
PPARG	ZNF773	0.953	1
PPARGC1A	SF3B3	0.953	1
PPARGC1A	TRERF1	0.953	1
PPARGC1A	CNOT1	0.953	1
PPARGC1A	FAM47C	0.953	1
PPP4R1	CNOT3	0.953	1
PPP4R1	Amp_6q21	0.953	1
RBM10	SSH3	0.953	1
RIPK4	Amp_8q22.3	0.953	1
SNRPB	Del_6p25.3	0.953	1
SSH3	9p-Del	0.953	1
TAF11	Amp_12q15	0.953	1
TRERF1	DNAH6	0.953	1
USP28	CNOT3	0.953	1
USP28	Del_5q12.1	0.953	1
WAC	Amp_11q22.2	0.953	1
BAP1	8q-Amp	0.953	1
BAP1	22q-Del	0.953	1
SCARF2	Del_16q23.1	0.953	1
TMCO4	Amp_19q12	0.953	1
ZNF773	Del_Xp11.3	0.953	1
1q-Amp	Amp_11q22.2	0.953	1
3p-Amp	Amp_8q22.3	0.953	1
3q-Amp	Amp_1q21.3	0.953	1
3q-Amp	Del_16q23.1	0.953	1
8q-Amp	Del_5q12.1	0.953	1
22q-Del	Del_1p36.11	0.953	1
Amp_3p25.2	Amp_19q13.43	0.953	1
Amp_6q21	Del_Xp11.3	0.953	1
Amp_10p14	Del_17p12	0.953	1
Amp_13q22.1	Del_15q13.1	0.953	1
Del_1p36.11	Del_18q23	0.953	1
Del_4q34.2	Del_6p25.3	0.953	1
ARID1A	16p-Del	0.954	1
COPZ2	Del_2q34	0.954	1
KDM6A	PTEN	0.954	1
KDM6A	EXOSC10	0.954	1
KDM6A	THRAP3	0.954	1
PIK3CA	Del_2q37.1	0.954	1
PKHD1	5q-Del	0.954	1
PLCXD3	16p-Del	0.954	1
RXRA	Amp_5p15.33	0.954	1
SF3B1	DAZAP1	0.954	1
ZFP36L1	ZNF185	0.954	1
AGR3	MYO16	0.954	1
AGR3	22q-Del	0.954	1
AGR3	Amp_11q22.2	0.954	1
ATAD5	5q-Del	0.954	1
CDKN2AIPNL	Del_4q22.1	0.954	1
MYO16	RBP2	0.954	1
NEK11	Amp_1q23.3	0.954	1
RBM10	18q-Del	0.954	1
TRERF1	18q-Del	0.954	1
USP28	SPTAN1	0.954	1
ADC	22q-Del	0.954	1
ADC	Amp_11q22.2	0.954	1
ASXL1	Amp_3p25.2	0.954	1
DNAH6	Amp_1q23.3	0.954	1
FUT5	Amp_1p34.2	0.954	1
SPTAN1	Del_Xp11.3	0.954	1
ZNF185	Amp_1p34.2	0.954	1
8q-Amp	Del_11p15.5	0.954	1
11p-Del	Del_4q34.2	0.954	1
16p-Del	Amp_19q13.43	0.954	1
8p-Del	Del_2q22.1	0.954	1
Amp_11q22.2	Amp_19q13.43	0.954	1
Amp_11q22.2	Del_8p23.3	0.954	1
CDKN1A	TXNIP	0.955	1
CDKN1A	Del_5q12.1	0.955	1
CNNM4	CTNNB1	0.955	1
CNNM4	FOXQ1	0.955	1
CNNM4	KRAS	0.955	1
CNNM4	NFE2L3	0.955	1
CNNM4	PIK3CA	0.955	1
CNNM4	PTEN	0.955	1
CNNM4	IKZF2	0.955	1
CNNM4	WAC	0.955	1
COPZ2	PLCXD3	0.955	1
COPZ2	AGR3	0.955	1
COPZ2	RBP2	0.955	1
COPZ2	ADC	0.955	1
CTNNB1	GPS2	0.955	1
CTNNB1	SF1	0.955	1
CTNNB1	NKX2-2	0.955	1
ERBB3	5p-Amp	0.955	1
FOXA1	GPS2	0.955	1
FOXQ1	MIPOL1	0.955	1
FOXQ1	TFG	0.955	1
GPR50	MIPOL1	0.955	1
GPR50	SF1	0.955	1
GPR50	ZNF511	0.955	1
GPR50	TFG	0.955	1
GPS2	CASP8	0.955	1
GPS2	EXOSC10	0.955	1
GPS2	WAC	0.955	1
GPS2	ZNF750	0.955	1
GTF2I	5q-Del	0.955	1
KDM6A	11q-Del	0.955	1
KPTN	PLCXD3	0.955	1
KPTN	AGR3	0.955	1
KPTN	RBP2	0.955	1
KPTN	ADC	0.955	1
KPTN	DAZAP1	0.955	1
KRAS	MIPOL1	0.955	1
KRAS	SF1	0.955	1
KRAS	TFG	0.955	1
METTL3	11p-Del	0.955	1
MIPOL1	NFE2L3	0.955	1
MIPOL1	PTEN	0.955	1
MIPOL1	EXOSC10	0.955	1
MIPOL1	THRAP3	0.955	1
MIPOL1	WAC	0.955	1
MIPOL1	ZNF750	0.955	1
MIPOL1	BAP1	0.955	1
MIPOL1	CDH1	0.955	1
MIPOL1	EPS8	0.955	1
MIPOL1	1q-Amp	0.955	1
NF1	14q-Del	0.955	1
NFE2L2	9p-Del	0.955	1
NFE2L3	TFG	0.955	1
NRAS	RBM26	0.955	1
NRAS	15q-Del	0.955	1
NRAS	Amp_8p11.21	0.955	1
PLCXD3	PTTG1IP	0.955	1
PSIP1	UBA52	0.955	1
PSIP1	ZBTB47	0.955	1
PSIP1	UNC93B1	0.955	1
PTEN	SF1	0.955	1
PTEN	NKX2-2	0.955	1
PTTG1IP	AGR3	0.955	1
PTTG1IP	RBP2	0.955	1
PTTG1IP	ADC	0.955	1
PTTG1IP	DAZAP1	0.955	1
RPTN	HSP90AA1	0.955	1
RUNX1	ZNF511	0.955	1
RUNX1	NKX2-2	0.955	1
SF1	DCDC1	0.955	1
SF1	ZNF750	0.955	1
SF1	CDH1	0.955	1
SF1	1q-Amp	0.955	1
TBC1D12	ZFP36L1	0.955	1
TSC1	ACTB	0.955	1
TSC1	RIPK4	0.955	1
TSC1	CUL1	0.955	1
ZNF511	DCDC1	0.955	1
ZNF511	IKZF2	0.955	1
CASP8	NKX2-2	0.955	1
CASP8	TFG	0.955	1
DCDC1	NKX2-2	0.955	1
DDX3X	ASXL1	0.955	1
DENND5B	UNC93B1	0.955	1
EPHA2	Del_16q23.1	0.955	1
HFM1	Del_6p25.3	0.955	1
HSP90AA1	Del_7q36.3	0.955	1
IKZF2	TFG	0.955	1
MED13	SPTAN1	0.955	1
NAA15	ASXL1	0.955	1
NKX2-2	BAP1	0.955	1
OR10Z1	Amp_5p15.33	0.955	1
OR10Z1	Del_5q12.1	0.955	1
RARG	ASXL1	0.955	1
RBM26	UBA52	0.955	1
RBM26	ZBTB47	0.955	1
RIPK4	Del_5q12.1	0.955	1
SSH3	11q-Del	0.955	1
SSH3	5q-Del	0.955	1
TFG	WAC	0.955	1
TFG	CDH1	0.955	1
TFG	EPS8	0.955	1
WAC	Amp_20q11.21	0.955	1
ASXL1	Amp_4q13.3	0.955	1
ASXL1	Del_4q22.1	0.955	1
EPS8	Amp_20q11.21	0.955	1
HLA-A	15q-Del	0.955	1
OGDH	Amp_12q15	0.955	1
19q-Amp	Del_9p21.3	0.955	1
22q-Del	9p-Del	0.955	1
4q-Del	Del_2q37.1	0.955	1
Amp_4q13.3	Del_12p13.1	0.955	1
Amp_8p11.23	Del_19p13.3	0.955	1
Amp_10p14	Del_4q34.2	0.955	1
Del_16p13.3	Del_19p13.3	0.955	1
BTG2	Del_8p23.3	0.956	1
CFHR4	Del_13q14.2	0.956	1
COPZ2	FAT1	0.956	1
COPZ2	Del_11q23.3	0.956	1
ELF3	Amp_8p11.21	0.956	1
ERBB2	ZFP36L2	0.956	1
ERBB2	Amp_7p21.1	0.956	1
KDM6A	17p-Del	0.956	1
KLF5	NFE2L2	0.956	1
NF1	ZBTB7B	0.956	1
NF1	ZNF773	0.956	1
NFE2L2	4q-Del	0.956	1
PIK3CA	UBA52	0.956	1
PTTG1IP	FAT1	0.956	1
RHOB	ATAD5	0.956	1
RXRA	ARID1B	0.956	1
SARNP	Del_4q22.1	0.956	1
SF3B1	PARD3	0.956	1
SF3B1	ARID1B	0.956	1
SF3B1	4q-Del	0.956	1
KDM5A	Del_2q37.1	0.956	1
OR10Z1	Del_4q22.1	0.956	1
PARD3	Del_19p13.3	0.956	1
RIPK4	Amp_19q12	0.956	1
ZNF626	Amp_19q12	0.956	1
20q-Amp	18q-Del	0.956	1
7p-Amp	Amp_11q22.2	0.956	1
11q-Del	4q-Del	0.956	1
22q-Del	4q-Del	0.956	1
4q-Del	Del_6q27	0.956	1
4q-Del	Del_19p13.3	0.956	1
Amp_3q26.33	Del_9p21.3	0.956	1
Amp_4p16.3	Del_2q37.1	0.956	1
Amp_5p15.33	Del_10q23.31	0.956	1
Amp_7p21.1	Del_Xq21.33	0.956	1
Amp_8p11.21	Amp_17q23.3	0.956	1
Amp_8p11.21	Del_3p14.2	0.956	1
Amp_13q22.1	Amp_22q12.2	0.956	1
Amp_19q12	Del_6q27	0.956	1
Del_1q32.1	Del_11q25	0.956	1
Del_11q25	Del_Xq21.33	0.956	1
ARID1A	CDK12	0.957	1
ARID1A	Del_6q27	0.957	1
ASXL2	Amp_1q23.3	0.957	1
ATM	FBXW7	0.957	1
BTG2	HRAS	0.957	1
BTG2	ACTB	0.957	1
BTG2	RIPK4	0.957	1
BTG2	SLC9A4	0.957	1
C12orf43	SLC9A4	0.957	1
C3orf70	HIST1H2AG	0.957	1
C3orf70	CCNE2	0.957	1
C3orf70	EPHA2	0.957	1
C3orf70	IL10RB	0.957	1
C3orf70	PHLDA3	0.957	1
C3orf70	TAF11	0.957	1
CFHR4	PIK3CA	0.957	1
CSMD3	MIPOL1	0.957	1
CSMD3	ZNF511	0.957	1
CSMD3	NKX2-2	0.957	1
HIST1H2AG	ZFP36L2	0.957	1
HIST1H2AG	RIPK4	0.957	1
HIST1H2AG	ZNF626	0.957	1
HRAS	LETMD1	0.957	1
HRAS	PHLDA3	0.957	1
KDM6A	RBP2	0.957	1
KLF5	ADC	0.957	1
KLF5	DAZAP1	0.957	1
NHLRC1	ZFP36L2	0.957	1
NHLRC1	ZNF626	0.957	1
NHLRC1	CUL1	0.957	1
NHLRC1	3p-Amp	0.957	1
PIGS	Del_13q14.2	0.957	1
PIK3CA	CTCF	0.957	1
PIK3CA	PPP4R1	0.957	1
PLCXD3	ARID1B	0.957	1
PLCXD3	4q-Del	0.957	1
PSIP1	Amp_11q13.3	0.957	1
RHOA	SHANK1	0.957	1
RHOA	Amp_3p25.2	0.957	1
SHANK1	Amp_3p25.2	0.957	1
TBC1D12	11q-Del	0.957	1
TGIF2LX	ZFP36L2	0.957	1
TGIF2LX	ACTB	0.957	1
TGIF2LX	RIPK4	0.957	1
TGIF2LX	ZNF626	0.957	1
TSC1	NKX2-2	0.957	1
ZFP36L2	IL10RB	0.957	1
ZFP36L2	PHLDA3	0.957	1
ZFP36L2	TAF11	0.957	1
ZNF180	Del_4q22.1	0.957	1
ZNF486	Del_13q14.2	0.957	1
ACTB	CCNE2	0.957	1
ACTB	EPHA2	0.957	1
AGR3	PARD3	0.957	1
CCNE2	RIPK4	0.957	1
CCNE2	CUL1	0.957	1
CTCF	Del_6p25.3	0.957	1
DDX3X	Del_4q22.1	0.957	1
DPYS	Amp_22q12.2	0.957	1
HFM1	CUL1	0.957	1
KDM5A	SLC9A4	0.957	1
KDM5A	CUL1	0.957	1
KDM5A	Amp_1p34.2	0.957	1
LETMD1	ZNF626	0.957	1
MBD1	Amp_22q12.2	0.957	1
NAA15	Del_17p12	0.957	1
NCOA1	RIPK4	0.957	1
NCOA1	SLC9A4	0.957	1
NCOA1	ZNF626	0.957	1
PARD3	RBP2	0.957	1
PARD3	DAZAP1	0.957	1
PHLDA3	ZNF626	0.957	1
PPP4R1	Amp_22q12.2	0.957	1
PPP4R1	Del_6p25.3	0.957	1
PPP4R1	Del_16q23.1	0.957	1
RBP2	7p-Amp	0.957	1
RBP2	4q-Del	0.957	1
RIPK4	TAF11	0.957	1
RIPK4	Amp_4p16.3	0.957	1
SLC9A4	SNRPB	0.957	1
SLC9A4	SCARF2	0.957	1
TAF11	ZNF626	0.957	1
USP28	Amp_13q22.1	0.957	1
USP28	Amp_22q12.2	0.957	1
USP28	Del_6p25.3	0.957	1
ADC	ARID1B	0.957	1
ARID1B	DAZAP1	0.957	1
DAZAP1	4q-Del	0.957	1
20p-Amp	18q-Del	0.957	1
3p-Amp	Amp_4p16.3	0.957	1
3q-Amp	Amp_6p22.3	0.957	1
5p-Amp	Del_16p13.3	0.957	1
8q-Amp	Amp_19q12	0.957	1
10q-Del	Amp_6p22.3	0.957	1
19p-Del	Del_2q37.1	0.957	1
Amp_1p34.2	Amp_4p16.3	0.957	1
Amp_1q23.3	Amp_17q12	0.957	1
Amp_1q23.3	Del_13q14.2	0.957	1
Amp_6p22.3	Del_16p13.3	0.957	1
Amp_12q15	Del_Xp11.3	0.957	1
Amp_22q12.2	Del_Xp11.3	0.957	1
Del_6p25.3	Del_Xp11.3	0.957	1
Del_7q36.3	Del_17p12	0.957	1
Del_11p15.5	Del_12p13.1	0.957	1
COPZ2	Amp_8p11.21	0.958	1
CSMD3	AGR3	0.958	1
CSMD3	RBP2	0.958	1
CSMD3	Amp_8p11.23	0.958	1
CSMD3	Amp_19q13.43	0.958	1
CTNNB1	KLF5	0.958	1
ELF3	20p-Amp	0.958	1
ERBB2	UNC93B1	0.958	1
ERCC2	TRERF1	0.958	1
ERCC2	Amp_12q15	0.958	1
FOXA1	KLF5	0.958	1
FOXA1	7p-Amp	0.958	1
FOXQ1	PARD3	0.958	1
GPR50	7p-Amp	0.958	1
HIST1H3B	CDK12	0.958	1
HIST1H3B	4p-Del	0.958	1
IDH1	RPTN	0.958	1
IDH1	ZNF180	0.958	1
KLF5	KRAS	0.958	1
KLF5	CASP8	0.958	1
KLF5	DCDC1	0.958	1
KRAS	PARD3	0.958	1
KRAS	ARID1B	0.958	1
METTL3	Del_18q23	0.958	1
NFE2L3	4q-Del	0.958	1
PIGS	RPTN	0.958	1
PIGS	ZNF180	0.958	1
PIGS	NAA15	0.958	1
PIGS	RARG	0.958	1
PIGS	Amp_4q13.3	0.958	1
PIGS	Del_7q36.3	0.958	1
POTEG	RPTN	0.958	1
POTEG	Del_7q36.3	0.958	1
PROS1	TP53	0.958	1
PSIP1	ITGA4	0.958	1
PSIP1	DNAH6	0.958	1
PTTG1IP	Amp_8p11.21	0.958	1
RHOA	Del_18q23	0.958	1
RHOB	TRERF1	0.958	1
RPTN	SARNP	0.958	1
RPTN	ZNF486	0.958	1
RPTN	OR10Z1	0.958	1
RPTN	Del_2q37.1	0.958	1
RPTN	Del_10q23.31	0.958	1
SARNP	ZNF180	0.958	1
SARNP	DDX3X	0.958	1
SARNP	NAA15	0.958	1
SARNP	19q-Amp	0.958	1
SARNP	Amp_4q13.3	0.958	1
SARNP	Del_7q36.3	0.958	1
SF3B1	Amp_1q21.3	0.958	1
ZFP36L2	Del_13q14.2	0.958	1
ZNF180	ZNF486	0.958	1
ZNF180	FUS	0.958	1
ZNF486	DDX3X	0.958	1
CDK12	17q-Amp	0.958	1
CDK12	Amp_1q23.3	0.958	1
CDK12	Del_1q32.1	0.958	1
DCDC1	ARID1B	0.958	1
DCDC1	7p-Amp	0.958	1
DCDC1	4q-Del	0.958	1
DDX3X	UGP2	0.958	1
DENND5B	TXNIP	0.958	1
DPYS	5p-Amp	0.958	1
EXOSC10	PARD3	0.958	1
EXOSC10	ARID1B	0.958	1
EXOSC10	4q-Del	0.958	1
IKZF2	PARD3	0.958	1
IKZF2	7p-Amp	0.958	1
ITGA4	7q-Amp	0.958	1
NAA15	UGP2	0.958	1
NEK11	RBM26	0.958	1
NEK11	15q-Del	0.958	1
OR10Z1	Del_7q36.3	0.958	1
PPARGC1A	15q-Del	0.958	1
PPP4R1	5p-Amp	0.958	1
RARG	FUS	0.958	1
RBM10	Del_2q34	0.958	1
RBM26	SSH3	0.958	1
THRAP3	7p-Amp	0.958	1
WAC	7p-Amp	0.958	1
WAC	4q-Del	0.958	1
FUT5	9p-Del	0.958	1
GNA13	4p-Del	0.958	1
TMCO4	4p-Del	0.958	1
5p-Amp	Del_Xp11.3	0.958	1
Amp_3q26.33	Amp_22q12.2	0.958	1
Amp_4q13.3	Del_10q23.31	0.958	1
Amp_8q22.3	Amp_17q23.3	0.958	1
Del_7q36.3	Del_10q23.31	0.958	1
ARID1A	PIK3CA	0.959	1
ASXL2	IDH1	0.959	1
ASXL2	ASXL1	0.959	1
ASXL2	FUS	0.959	1
ASXL2	Del_12p13.1	0.959	1
C12orf43	ERBB3	0.959	1
C12orf43	Amp_1q23.3	0.959	1
C3orf70	10q-Del	0.959	1
CDKN1A	CDKN2AIPNL	0.959	1
CNNM4	Amp_8p11.23	0.959	1
COPZ2	ERBB2	0.959	1
CREBBP	ZFP36L2	0.959	1
CREBBP	CUL1	0.959	1
ELF3	HIST1H3B	0.959	1
ERBB3	NHLRC1	0.959	1
ERBB3	RB1	0.959	1
ERBB3	CCNE2	0.959	1
ERBB3	PHLDA3	0.959	1
ERBB3	SCARF2	0.959	1
FGFR3	GPS2	0.959	1
FGFR3	TFG	0.959	1
GPS2	Amp_8p11.23	0.959	1
HIST1H3B	HORMAD1	0.959	1
HIST1H3B	Amp_6q21	0.959	1
HORMAD1	GNA13	0.959	1
HORMAD1	Del_1q32.1	0.959	1
HORMAD1	Del_Xq21.33	0.959	1
KDM6A	ZBTB7B	0.959	1
KDM6A	PSMC6	0.959	1
KPTN	Amp_19q12	0.959	1
MIPOL1	STAG2	0.959	1
PIGS	Amp_17q12	0.959	1
POTEG	Amp_17q12	0.959	1
SARNP	Amp_17q12	0.959	1
SF1	STAG2	0.959	1
STAG2	TFG	0.959	1
TBC1D12	ZFP36L2	0.959	1
TBC1D12	RIPK4	0.959	1
ZBTB7B	Del_Xq21.33	0.959	1
ZFP36L2	Amp_6p22.3	0.959	1
ZFP36L2	Del_15q13.1	0.959	1
ACTB	3q-Amp	0.959	1
ACTB	Del_6q27	0.959	1
ACTB	Del_15q13.1	0.959	1
CDKN2AIPNL	Del_19p13.3	0.959	1
KDM5A	Del_22q13.32	0.959	1
LETMD1	Amp_1q23.3	0.959	1
OR10Z1	5p-Amp	0.959	1
OR10Z1	Amp_17q12	0.959	1
PSMC6	Del_Xq21.33	0.959	1
RIPK4	Amp_6p22.3	0.959	1
SLC9A4	Amp_6p22.3	0.959	1
SLC9A4	Del_15q13.1	0.959	1
STK32B	TMCO4	0.959	1
CUL1	3q-Amp	0.959	1
CUL1	10q-Del	0.959	1
FUS	Amp_17q12	0.959	1
TMCO4	ZNF773	0.959	1
ZNF773	Del_Xq21.33	0.959	1
17q-Amp	Amp_6q21	0.959	1
17q-Amp	Del_3p14.2	0.959	1
3p-Amp	Amp_7p21.1	0.959	1
3p-Amp	Del_11q25	0.959	1
11p-Del	Del_8p21.3	0.959	1
19p-Del	Amp_1q23.3	0.959	1
9q-Del	Del_10q23.31	0.959	1
Amp_1q21.3	Del_6p25.3	0.959	1
Amp_1q21.3	Del_11q25	0.959	1
Amp_3q26.33	Del_4q34.2	0.959	1
Amp_3q26.33	Del_5q12.1	0.959	1
Amp_4p16.3	Del_22q13.32	0.959	1
Amp_16p13.2	Amp_19q13.43	0.959	1
Amp_17q23.3	Del_1q32.1	0.959	1
Amp_17q23.3	Del_Xq21.33	0.959	1
Del_3p14.2	Del_Xq21.33	0.959	1
Del_13q14.2	Del_19p13.3	0.959	1
CREBBP	UBA52	0.96	1
FGFR3	AGR3	0.96	1
FGFR3	Amp_4p16.3	0.96	1
GPR50	18q-Del	0.96	1
HORMAD1	Amp_1p34.2	0.96	1
METTL3	Del_11p15.5	0.96	1
MIPOL1	Del_15q13.1	0.96	1
NF1	SHANK1	0.96	1
NF1	TP53	0.96	1
PLCXD3	Amp_8p11.23	0.96	1
PLCXD3	Del_16p13.3	0.96	1
RPTN	SF3B3	0.96	1
RPTN	TRERF1	0.96	1
RXRA	STAG2	0.96	1
SF3B1	Amp_1q23.3	0.96	1
SHANK1	SPTAN1	0.96	1
STAG2	EPHA2	0.96	1
STAG2	NCOA1	0.96	1
TBC1D12	ZBTB47	0.96	1
ZFP36L1	Amp_6q21	0.96	1
AGR3	Del_16p13.3	0.96	1
ARID2	PSMC6	0.96	1
ATAD5	Amp_12q15	0.96	1
CDK12	15q-Del	0.96	1
CDK12	Del_14q24.1	0.96	1
CPD	NAA15	0.96	1
CPD	RARG	0.96	1
CPD	Del_7q36.3	0.96	1
CTCF	20p-Amp	0.96	1
DDX3X	TRERF1	0.96	1
DDX3X	CNOT1	0.96	1
DPYS	Del_22q13.32	0.96	1
EPHA2	ZBTB47	0.96	1
EXOSC10	Del_14q24.1	0.96	1
HFM1	Del_16p13.3	0.96	1
KDM5A	UBA52	0.96	1
KDM5A	ZBTB47	0.96	1
KDM5A	UNC93B1	0.96	1
MBD1	Amp_1q23.3	0.96	1
MED13	Del_6p25.3	0.96	1
NAA15	CNOT1	0.96	1
NCOA1	UBA52	0.96	1
NCOA1	HLA-A	0.96	1
NKX2-2	Del_15q13.1	0.96	1
RARG	TRERF1	0.96	1
SSH3	Del_11q23.3	0.96	1
TFG	10q-Del	0.96	1
TXNIP	Del_11q23.3	0.96	1
UBA52	Del_6q27	0.96	1
USP28	Amp_1q23.3	0.96	1
DAZAP1	Del_16p13.3	0.96	1
FUT5	14q-Del	0.96	1
FUT5	4p-Del	0.96	1
HLA-A	Amp_4p16.3	0.96	1
OGDH	UNC93B1	0.96	1
SPTAN1	22q-Del	0.96	1
16p-Del	Amp_1q23.3	0.96	1
4p-Del	Del_14q24.1	0.96	1
Amp_1q21.3	Amp_20q11.21	0.96	1
Amp_16p13.2	Del_16q23.1	0.96	1
Amp_20q11.21	Del_15q13.1	0.96	1
Del_1p36.11	Del_14q24.1	0.96	1
Del_8p21.3	Del_13q14.2	0.96	1
Del_10q23.31	Del_11q25	0.96	1
Del_22q13.32	Del_Xp11.3	0.96	1
ATM	PSIP1	0.961	1
ATM	Del_7q36.3	0.961	1
CNNM4	MBD1	0.961	1
CNNM4	PPARG	0.961	1
CNNM4	PPP4R1	0.961	1
CNNM4	USP28	0.961	1
CNNM4	Del_Xp11.3	0.961	1
COPZ2	CREBBP	0.961	1
COPZ2	TBC1D12	0.961	1
COPZ2	Del_11q25	0.961	1
CREBBP	PTTG1IP	0.961	1
CSMD3	KRAS	0.961	1
CSMD3	RUNX1	0.961	1
CSMD3	DCDC1	0.961	1
CSMD3	IKZF2	0.961	1
CSMD3	Amp_8q22.3	0.961	1
ELF3	5q-Del	0.961	1
GPS2	PPP4R1	0.961	1
GPS2	Del_Xp11.3	0.961	1
KPTN	Del_6q27	0.961	1
MIPOL1	CTCF	0.961	1
MIPOL1	MARK2	0.961	1
MIPOL1	MBD1	0.961	1
MIPOL1	PPARG	0.961	1
PIK3CA	TXNIP	0.961	1
PLCXD3	Del_12p13.1	0.961	1
PROS1	TFG	0.961	1
PSIP1	Del_4q34.2	0.961	1
PTTG1IP	TBC1D12	0.961	1
RPTN	Del_4q34.2	0.961	1
SF1	CTCF	0.961	1
SF1	MARK2	0.961	1
SF1	Del_8p21.3	0.961	1
ZNF511	MBD1	0.961	1
ZNF511	PPARG	0.961	1
ZNF511	PPP4R1	0.961	1
ZNF511	Del_Xp11.3	0.961	1
AGR3	HSP90AA1	0.961	1
CDKN2AIPNL	Amp_19q13.43	0.961	1
CTCF	NKX2-2	0.961	1
DDX3X	Del_4q34.2	0.961	1
FAT1	PSMC6	0.961	1
FAT1	STK32B	0.961	1
HSP90AA1	RBP2	0.961	1
HSP90AA1	ADC	0.961	1
HSP90AA1	17p-Del	0.961	1
MBD1	TFG	0.961	1
PPARG	TFG	0.961	1
PPP4R1	TFG	0.961	1
RBP2	ASXL1	0.961	1
RBP2	Del_12p13.1	0.961	1
TFG	USP28	0.961	1
ADC	Del_12p13.1	0.961	1
ASXL1	DAZAP1	0.961	1
7q-Amp	Del_4q34.2	0.961	1
Amp_1p34.2	Del_16p13.3	0.961	1
Amp_4q13.3	Amp_17q12	0.961	1
Amp_4q13.3	Del_4q34.2	0.961	1
Amp_7p21.1	Del_6q27	0.961	1
Amp_8q22.3	Amp_13q22.1	0.961	1
Amp_17q23.3	Del_19p13.3	0.961	1
Amp_20q11.21	Del_2q37.1	0.961	1
BTG2	GTF2I	0.962	1
BTG2	ITGA4	0.962	1
BTG2	NEK11	0.962	1
C12orf43	GTF2I	0.962	1
C12orf43	PPARGC1A	0.962	1
C12orf43	DNAH6	0.962	1
CDKN1A	FUS	0.962	1
CDKN2A	GNA13	0.962	1
CDKN2A	Del_1q32.1	0.962	1
CFHR4	MYO16	0.962	1
COPZ2	DLX6	0.962	1
COPZ2	FUT5	0.962	1
COPZ2	ZNF185	0.962	1
CTNNB1	Amp_3p25.2	0.962	1
DIAPH2	FAT1	0.962	1
ELF3	UBA52	0.962	1
FOXA1	Amp_3p25.2	0.962	1
GTF2I	CCNE2	0.962	1
GTF2I	LETMD1	0.962	1
GTF2I	19p-Del	0.962	1
HIST1H2AG	ITGA4	0.962	1
KPTN	DLX6	0.962	1
KPTN	FUT5	0.962	1
KPTN	ZNF185	0.962	1
NF1	SPTAN1	0.962	1
NHLRC1	DNAH6	0.962	1
NRAS	Amp_17q23.3	0.962	1
PIGS	11q-Del	0.962	1
POTEG	11q-Del	0.962	1
PROS1	MYO16	0.962	1
PSIP1	Del_14q24.1	0.962	1
PTTG1IP	DLX6	0.962	1
PTTG1IP	FUT5	0.962	1
PTTG1IP	ZNF185	0.962	1
RUNX1	Amp_3p25.2	0.962	1
RXRA	DPYS	0.962	1
RXRA	PPP4R1	0.962	1
RXRA	Del_12p13.1	0.962	1
SARNP	5q-Del	0.962	1
SF3B1	USP28	0.962	1
SF3B1	ASXL1	0.962	1
TGIF2LX	ITGA4	0.962	1
TGIF2LX	SSH3	0.962	1
TGIF2LX	TXNIP	0.962	1
CASP8	Amp_3p25.2	0.962	1
CCNE2	PPARGC1A	0.962	1
CTCF	MYO16	0.962	1
CTCF	16p-Del	0.962	1
DPYS	16p-Del	0.962	1
DPYS	22q-Del	0.962	1
IL10RB	TXNIP	0.962	1
IL10RB	DNAH6	0.962	1
LETMD1	SSH3	0.962	1
LETMD1	TXNIP	0.962	1
MARK2	Amp_11q22.2	0.962	1
MBD1	16p-Del	0.962	1
MED13	Amp_22q12.2	0.962	1
NEK11	SCARF2	0.962	1
NEK11	19p-Del	0.962	1
OR10Z1	5q-Del	0.962	1
PHLDA3	PPARGC1A	0.962	1
PPARG	Amp_11q22.2	0.962	1
PPARGC1A	TAF11	0.962	1
PPARGC1A	SCARF2	0.962	1
SNRPB	SSH3	0.962	1
SNRPB	DNAH6	0.962	1
SSH3	TAF11	0.962	1
SSH3	SCARF2	0.962	1
SSH3	19p-Del	0.962	1
UGP2	5q-Del	0.962	1
USP28	22q-Del	0.962	1
7q-Amp	Del_14q24.1	0.962	1
14q-Del	Amp_8p11.21	0.962	1
14q-Del	Del_2q22.1	0.962	1
Amp_5p15.33	Amp_13q22.1	0.962	1
Amp_5p15.33	Del_6p25.3	0.962	1
Amp_8p11.23	Amp_19q13.43	0.962	1
Amp_10p14	Del_1q32.1	0.962	1
Amp_11q22.2	Del_12p13.1	0.962	1
Amp_16p13.2	Amp_22q12.2	0.962	1
Amp_22q12.2	Del_5q12.1	0.962	1
BTG2	9p-Del	0.963	1
C12orf43	RB1	0.963	1
C3orf70	METTL3	0.963	1
C3orf70	SHANK1	0.963	1
CDKN1A	Del_12p13.1	0.963	1
CDKN2A	FUT5	0.963	1
CDKN2A	ZNF185	0.963	1
COPZ2	Del_3p14.2	0.963	1
CTNNB1	ERCC2	0.963	1
CTNNB1	POTEG	0.963	1
CTNNB1	ZNF486	0.963	1
CTNNB1	FUS	0.963	1
ELF3	PTTG1IP	0.963	1
ELF3	ACTB	0.963	1
ERCC2	CASP8	0.963	1
ERCC2	DCDC1	0.963	1
ERCC2	IKZF2	0.963	1
ERCC2	BAP1	0.963	1
FBXW7	GPS2	0.963	1
FBXW7	SF1	0.963	1
FOXA1	POTEG	0.963	1
FOXA1	SARNP	0.963	1
FOXA1	ASXL1	0.963	1
FOXQ1	PIGS	0.963	1
FOXQ1	POTEG	0.963	1
FOXQ1	UGP2	0.963	1
FOXQ1	ASXL1	0.963	1
GPR50	POTEG	0.963	1
GPR50	SARNP	0.963	1
GPR50	ZNF486	0.963	1
GPR50	UGP2	0.963	1
GPR50	ASXL1	0.963	1
HRAS	MED13	0.963	1
IDH1	THRAP3	0.963	1
IDH1	EPS8	0.963	1
KDM6A	Amp_3p25.2	0.963	1
KPTN	Amp_17q23.3	0.963	1
KRAS	POTEG	0.963	1
KRAS	SARNP	0.963	1
KRAS	UGP2	0.963	1
METTL3	RIPK4	0.963	1
METTL3	SLC9A4	0.963	1
METTL3	ZBTB47	0.963	1
MIPOL1	ATAD5	0.963	1
MIPOL1	Amp_16p13.2	0.963	1
NFE2L3	PIGS	0.963	1
NFE2L3	SARNP	0.963	1
NFE2L3	FUS	0.963	1
PIGS	RUNX1	0.963	1
PIGS	BAP1	0.963	1
PIGS	CDH1	0.963	1
PIGS	EPS8	0.963	1
PIGS	1q-Amp	0.963	1
PIGS	Del_1p36.11	0.963	1
POTEG	CASP8	0.963	1
POTEG	THRAP3	0.963	1
POTEG	CDH1	0.963	1
PTEN	SARNP	0.963	1
RHOA	GLTP	0.963	1
RHOA	RIPK4	0.963	1
RHOA	SLC9A4	0.963	1
RHOA	ZNF626	0.963	1
RHOB	DLX6	0.963	1
RUNX1	ZNF486	0.963	1
RUNX1	Del_12p13.1	0.963	1
SARNP	CASP8	0.963	1
SARNP	THRAP3	0.963	1
SARNP	WAC	0.963	1
SARNP	BAP1	0.963	1
SARNP	CDH1	0.963	1
SARNP	1q-Amp	0.963	1
SHANK1	ZFP36L2	0.963	1
SHANK1	RIPK4	0.963	1
SHANK1	SLC9A4	0.963	1
SHANK1	HLA-A	0.963	1
SHANK1	UNC93B1	0.963	1
TBC1D12	Del_9p21.3	0.963	1
ZNF486	DCDC1	0.963	1
ZNF486	IKZF2	0.963	1
ZNF486	ZNF750	0.963	1
ZNF511	ATAD5	0.963	1
ARID2	Del_8p23.3	0.963	1
CASP8	UGP2	0.963	1
CASP8	FUS	0.963	1
DCDC1	OR10Z1	0.963	1
EXOSC10	HSP90AA1	0.963	1
EXOSC10	OR10Z1	0.963	1
HSP90AA1	WAC	0.963	1
MED13	NKX2-2	0.963	1
MED13	TFG	0.963	1
MED13	ZNF626	0.963	1
NEK11	Del_2q22.1	0.963	1
OR10Z1	CDH1	0.963	1
OR10Z1	Del_1p36.11	0.963	1
STK32B	Amp_8p11.21	0.963	1
TFG	Amp_1q21.3	0.963	1
UGP2	ZNF750	0.963	1
WAC	FUS	0.963	1
ADC	Amp_11q13.3	0.963	1
CDH1	FUS	0.963	1
DAZAP1	Amp_11q13.3	0.963	1
EPS8	FUS	0.963	1
ZNF773	Amp_8p11.21	0.963	1
1q-Amp	Del_12p13.1	0.963	1
20q-Amp	6q-Del	0.963	1
20q-Amp	Amp_7p11.2	0.963	1
3p-Amp	Amp_17q23.3	0.963	1
15q-Del	Amp_1q21.3	0.963	1
Amp_3p25.2	Amp_20q11.21	0.963	1
Amp_7p11.2	Amp_13q22.1	0.963	1
Amp_19q13.43	Del_6q27	0.963	1
Amp_19q13.43	Del_11q25	0.963	1
BTG2	Del_14q24.1	0.964	1
CDKN1A	NAA15	0.964	1
CDKN1A	NDC80	0.964	1
CDKN1A	Amp_11q13.3	0.964	1
CDKN2A	DENND5B	0.964	1
CDKN2A	7q-Amp	0.964	1
EP300	PIGS	0.964	1
FBXW7	Del_22q13.32	0.964	1
FGFR3	1q-Amp	0.964	1
FOXA1	STAG2	0.964	1
KDM6A	Del_12p13.1	0.964	1
METTL3	Del_6p25.3	0.964	1
NFE2L2	3q-Amp	0.964	1
NRAS	Amp_6p22.3	0.964	1
PKHD1	Del_8p21.3	0.964	1
PLCXD3	CPD	0.964	1
PLCXD3	SF3B3	0.964	1
RB1	KDM5A	0.964	1
RHOB	7q-Amp	0.964	1
SHANK1	ZFP36L1	0.964	1
SHANK1	ARID2	0.964	1
STAG2	BAP1	0.964	1
STAG2	CDH1	0.964	1
TBC1D12	Del_12p13.1	0.964	1
AGR3	CPD	0.964	1
AGR3	SF3B3	0.964	1
AGR3	CNOT1	0.964	1
CPD	DAZAP1	0.964	1
DCDC1	Amp_8p11.23	0.964	1
EPHA2	SSH3	0.964	1
HSP90AA1	Amp_7p21.1	0.964	1
LETMD1	Del_14q24.1	0.964	1
MYO16	Del_15q13.1	0.964	1
NAA15	11q-Del	0.964	1
NCOA1	TXNIP	0.964	1
NDC80	5q-Del	0.964	1
NDC80	Del_19p13.3	0.964	1
NEK11	8p-Del	0.964	1
RARG	5q-Del	0.964	1
RARG	Del_19p13.3	0.964	1
RBM10	ADC	0.964	1
RBM10	5p-Amp	0.964	1
RBP2	SF3B3	0.964	1
SF3B3	ADC	0.964	1
SSH3	OGDH	0.964	1
SSH3	Amp_4p16.3	0.964	1
TFG	Del_10q23.31	0.964	1
UGP2	17p-Del	0.964	1
ADC	FAM47C	0.964	1
CNOT1	DAZAP1	0.964	1
DNAH6	OGDH	0.964	1
EPS8	Amp_8p11.23	0.964	1
SCARF2	18q-Del	0.964	1
20q-Amp	Del_11q23.3	0.964	1
3q-Amp	6q-Del	0.964	1
8q-Amp	Del_12p13.1	0.964	1
Amp_8p11.21	Del_13q14.2	0.964	1
Amp_13q22.1	Del_2q37.1	0.964	1
Amp_16p13.2	Del_8p21.3	0.964	1
Del_6q27	Del_9p23	0.964	1
Del_7q36.3	Del_19p13.3	0.964	1
Del_9p23	Del_12p13.1	0.964	1
Del_10q23.31	Del_19p13.3	0.964	1
Del_11q25	Del_12p13.1	0.964	1
ARID1A	C3orf70	0.965	1
ARID1A	AGR3	0.965	1
ARID1A	RBM26	0.965	1
ARID1A	ADC	0.965	1
ELF3	17p-Del	0.965	1
ELF3	Amp_11q13.3	0.965	1
EP300	PKHD1	0.965	1
ERBB2	TSC1	0.965	1
NF1	Del_4q34.2	0.965	1
PLCXD3	Del_4q34.2	0.965	1
POTEG	Amp_19q13.43	0.965	1
PSIP1	ZNF180	0.965	1
PSIP1	Amp_4q13.3	0.965	1
RHOB	Del_8p23.3	0.965	1
TSC1	ARID1B	0.965	1
ZNF511	Amp_6p22.3	0.965	1
CDKN2AIPNL	Del_15q13.1	0.965	1
DDX3X	RBM26	0.965	1
DDX3X	7q-Amp	0.965	1
DENND5B	NDC80	0.965	1
DLX6	Amp_22q12.2	0.965	1
MED13	17p-Del	0.965	1
NAA15	15q-Del	0.965	1
NDC80	7q-Amp	0.965	1
NDC80	15q-Del	0.965	1
NKX2-2	Amp_6p22.3	0.965	1
RBP2	Del_4q34.2	0.965	1
TRERF1	Amp_3p25.2	0.965	1
TRERF1	Del_2q22.1	0.965	1
CUL1	Amp_5p15.33	0.965	1
DAZAP1	Del_4q34.2	0.965	1
FAM47C	Amp_8p11.21	0.965	1
FUT5	Amp_22q12.2	0.965	1
GNA13	8p-Del	0.965	1
SPTAN1	TMCO4	0.965	1
19q-Amp	15q-Del	0.965	1
11p-Del	Amp_17q23.3	0.965	1
14q-Del	Amp_1q21.3	0.965	1
15q-Del	Amp_4q13.3	0.965	1
17p-Del	Amp_17q23.3	0.965	1
Amp_3q26.33	Del_11p15.5	0.965	1
Amp_5p15.33	Amp_10p14	0.965	1
Amp_6p22.3	Amp_20q11.21	0.965	1
Amp_17q23.3	Del_10q23.31	0.965	1
Del_3p14.2	Del_10q23.31	0.965	1
Del_4q22.1	Del_19p13.3	0.965	1
Del_13q14.2	Del_14q24.1	0.965	1
ARID1A	CTNNB1	0.966	1
ARID1A	FOXA1	0.966	1
ARID1A	NFE2L3	0.966	1
ARID1A	RUNX1	0.966	1
ARID1A	ARID1B	0.966	1
ASXL2	TRERF1	0.966	1
ATM	CNNM4	0.966	1
ATM	MIPOL1	0.966	1
ATM	ZNF511	0.966	1
ATM	TFG	0.966	1
BTG2	RPTN	0.966	1
BTG2	ZNF180	0.966	1
BTG2	DDX3X	0.966	1
BTG2	RARG	0.966	1
BTG2	19q-Amp	0.966	1
C12orf43	ZNF180	0.966	1
C12orf43	NAA15	0.966	1
C12orf43	RARG	0.966	1
CFHR4	7p-Amp	0.966	1
CFHR4	Del_18q23	0.966	1
COPZ2	SPTAN1	0.966	1
EP300	HRAS	0.966	1
ERBB2	GTF2I	0.966	1
ERBB2	SSH3	0.966	1
ERBB2	TXNIP	0.966	1
ERBB2	DNAH6	0.966	1
ERBB2	ZNF773	0.966	1
ERBB2	14q-Del	0.966	1
ERCC2	PHLDA3	0.966	1
ERCC2	SNRPB	0.966	1
ERCC2	7q-Amp	0.966	1
GPS2	GNA13	0.966	1
GPS2	Del_1q32.1	0.966	1
HIST1H2AG	RPTN	0.966	1
HIST1H2AG	ZNF180	0.966	1
HIST1H2AG	NDC80	0.966	1
HIST1H2AG	Amp_4q13.3	0.966	1
HIST1H3B	MIPOL1	0.966	1
HIST1H3B	SF1	0.966	1
HIST1H3B	ZNF511	0.966	1
HIST1H3B	NKX2-2	0.966	1
HORMAD1	ZNF773	0.966	1
HORMAD1	Amp_6q21	0.966	1
HORMAD1	Amp_19q12	0.966	1
KLF5	CTCF	0.966	1
MIPOL1	NF1	0.966	1
MIPOL1	TMCO4	0.966	1
MIPOL1	17q-Amp	0.966	1
MIPOL1	Del_1q32.1	0.966	1
MIPOL1	Del_Xq21.33	0.966	1
NF1	SF1	0.966	1
NF1	Del_16q23.1	0.966	1
NF2	STK32B	0.966	1
NF2	CNOT3	0.966	1
NF2	ZNF773	0.966	1
NF2	Amp_6q21	0.966	1
NFE2L2	Del_10q23.31	0.966	1
NHLRC1	ZNF180	0.966	1
NHLRC1	DDX3X	0.966	1
NHLRC1	NAA15	0.966	1
NHLRC1	RARG	0.966	1
NHLRC1	Amp_4q13.3	0.966	1
PIGS	Del_18q23	0.966	1
PIK3CA	SPTAN1	0.966	1
PTEN	Amp_5p15.33	0.966	1
PTTG1IP	SPTAN1	0.966	1
RPTN	IL10RB	0.966	1
RPTN	TAF11	0.966	1
SARNP	8q-Amp	0.966	1
SF1	Del_8p23.3	0.966	1
TGIF2LX	Amp_4q13.3	0.966	1
TGIF2LX	Del_7q36.3	0.966	1
TP53	ITGA4	0.966	1
TP53	TXNIP	0.966	1
ZBTB7B	ZNF773	0.966	1
ZBTB7B	Amp_6q21	0.966	1
ZNF180	CCNE2	0.966	1
ZNF180	LETMD1	0.966	1
ZNF486	8q-Amp	0.966	1
ZNF511	GNA13	0.966	1
ZNF511	Del_Xq21.33	0.966	1
CCNE2	DDX3X	0.966	1
CCNE2	NAA15	0.966	1
CCNE2	NDC80	0.966	1
CCNE2	Amp_4q13.3	0.966	1
CDK12	NCOA1	0.966	1
CTCF	PARD3	0.966	1
CTCF	ARID1B	0.966	1
DCDC1	Del_4q22.1	0.966	1
DDX3X	IL10RB	0.966	1
DDX3X	PHLDA3	0.966	1
DPYS	ARID1B	0.966	1
DPYS	Del_18q23	0.966	1
IL10RB	NAA15	0.966	1
KDM5A	Amp_3q26.33	0.966	1
LETMD1	RARG	0.966	1
LETMD1	Amp_4q13.3	0.966	1
MBD1	Amp_1q21.3	0.966	1
NAA15	PHLDA3	0.966	1
NAA15	9p-Del	0.966	1
NDC80	PHLDA3	0.966	1
NDC80	SCARF2	0.966	1
NDC80	19p-Del	0.966	1
NEK11	Amp_19q12	0.966	1
NEK11	Del_5q12.1	0.966	1
NKX2-2	TMCO4	0.966	1
NKX2-2	Amp_20q11.21	0.966	1
NKX2-2	Del_Xq21.33	0.966	1
OR10Z1	8q-Amp	0.966	1
PARD3	PPP4R1	0.966	1
PARD3	USP28	0.966	1
PHLDA3	RARG	0.966	1
PPARG	Amp_1q21.3	0.966	1
PSMC6	STK32B	0.966	1
RARG	SNRPB	0.966	1
RARG	SCARF2	0.966	1
RARG	19p-Del	0.966	1
SLC9A4	11p-Del	0.966	1
SLC9A4	17p-Del	0.966	1
SNRPB	19q-Amp	0.966	1
SNRPB	Del_7q36.3	0.966	1
SSH3	9q-Del	0.966	1
STK32B	ZNF773	0.966	1
TFG	TMCO4	0.966	1
TFG	Amp_20q11.21	0.966	1
ZBTB47	Amp_20q11.21	0.966	1
ARID1B	Del_Xp11.3	0.966	1
BAP1	Del_4q22.1	0.966	1
CDH1	Del_4q22.1	0.966	1
FUS	Del_18q23	0.966	1
FUT5	9q-Del	0.966	1
GNA13	Amp_22q12.2	0.966	1
SCARF2	Del_7q36.3	0.966	1
SPTAN1	UNC93B1	0.966	1
ZNF773	Amp_6q21	0.966	1
1q-Amp	Del_4q22.1	0.966	1
7p-Amp	Amp_5p15.33	0.966	1
7q-Amp	Amp_6p22.3	0.966	1
8q-Amp	Del_Xp11.3	0.966	1
19p-Del	Del_7q36.3	0.966	1
Amp_1q21.3	Amp_17q23.3	0.966	1
Amp_6q21	Amp_19q12	0.966	1
Amp_16p13.2	Del_2q34	0.966	1
Amp_22q12.2	Del_Xq21.33	0.966	1
Del_4q22.1	Del_11p15.5	0.966	1
Del_18q23	Del_Xp11.3	0.966	1
C3orf70	NF1	0.967	1
C3orf70	ZBTB47	0.967	1
C3orf70	UNC93B1	0.967	1
DIAPH2	BAP1	0.967	1
ERCC2	Amp_1q23.3	0.967	1
FOXQ1	FAM47C	0.967	1
GPR50	SF3B3	0.967	1
GPR50	TRERF1	0.967	1
HIST1H3B	Del_5q12.1	0.967	1
HRAS	GLTP	0.967	1
HRAS	UNC93B1	0.967	1
KLF5	HSP90AA1	0.967	1
KLF5	ASXL1	0.967	1
KPTN	Del_6p25.3	0.967	1
KPTN	Del_16q23.1	0.967	1
NF1	RIPK4	0.967	1
NFE2L3	CPD	0.967	1
NFE2L3	CNOT1	0.967	1
NHLRC1	TP53	0.967	1
NRAS	CUL1	0.967	1
PLCXD3	PSIP1	0.967	1
PLCXD3	RBM26	0.967	1
PSIP1	RBP2	0.967	1
PSIP1	ADC	0.967	1
PTEN	RBM10	0.967	1
TBC1D12	Amp_20q11.21	0.967	1
TP53	CPD	0.967	1
TP53	LETMD1	0.967	1
TP53	FAM47C	0.967	1
ZFP36L2	ZBTB47	0.967	1
ZFP36L2	HLA-A	0.967	1
ACTB	ZBTB47	0.967	1
ACTB	HLA-A	0.967	1
AGR3	DENND5B	0.967	1
CASP8	RBM10	0.967	1
CASP8	CNOT1	0.967	1
CDK12	PSMC6	0.967	1
CDKN2AIPNL	MED13	0.967	1
CPD	DCDC1	0.967	1
CPD	IKZF2	0.967	1
CPD	WAC	0.967	1
CPD	CDH1	0.967	1
DCDC1	SF3B3	0.967	1
DCDC1	CNOT1	0.967	1
DCDC1	FAM47C	0.967	1
DENND5B	DAZAP1	0.967	1
EXOSC10	SF3B3	0.967	1
GLTP	ZNF626	0.967	1
HSP90AA1	PARD3	0.967	1
HSP90AA1	4q-Del	0.967	1
HSP90AA1	Amp_17q23.3	0.967	1
IKZF2	SF3B3	0.967	1
NEK11	10q-Del	0.967	1
PPARGC1A	3q-Amp	0.967	1
PPARGC1A	10q-Del	0.967	1
PPARGC1A	Del_15q13.1	0.967	1
RBM26	ADC	0.967	1
RBP2	7q-Amp	0.967	1
RIPK4	UBA52	0.967	1
RIPK4	ZBTB47	0.967	1
RIPK4	HLA-A	0.967	1
RIPK4	UNC93B1	0.967	1
SF3B3	WAC	0.967	1
SLC9A4	UBA52	0.967	1
SLC9A4	HLA-A	0.967	1
STK32B	14q-Del	0.967	1
THRAP3	CNOT1	0.967	1
THRAP3	FAM47C	0.967	1
TRERF1	1q-Amp	0.967	1
TXNIP	3q-Amp	0.967	1
UBA52	ZNF626	0.967	1
ZNF626	UNC93B1	0.967	1
ADC	15q-Del	0.967	1
ASXL1	7p-Amp	0.967	1
CDH1	FAM47C	0.967	1
CNOT1	EPS8	0.967	1
DAZAP1	15q-Del	0.967	1
DNAH6	6q-Del	0.967	1
GNA13	Del_5q12.1	0.967	1
SPTAN1	Amp_8p11.23	0.967	1
UNC93B1	3p-Amp	0.967	1
ZNF185	Del_13q14.2	0.967	1
3q-Amp	Del_9p23	0.967	1
11p-Del	Del_16p13.3	0.967	1
14q-Del	Amp_6q21	0.967	1
15q-Del	Del_2q34	0.967	1
18q-Del	Amp_20q11.21	0.967	1
4q-Del	Del_12p13.1	0.967	1
6q-Del	Amp_8p11.21	0.967	1
6q-Del	Del_9p23	0.967	1
8p-Del	Del_11q25	0.967	1
9q-Del	Del_Xq21.33	0.967	1
Amp_1q21.3	Del_22q13.32	0.967	1
Amp_3q26.33	Del_8p21.3	0.967	1
Amp_3q26.33	Del_9p23	0.967	1
Amp_12q15	Amp_20q11.21	0.967	1
Amp_17q23.3	Del_12p13.1	0.967	1
Del_2q37.1	Del_11q25	0.967	1
Del_5q12.1	Del_Xq21.33	0.967	1
ARID1A	Del_16p13.3	0.968	1
BTG2	KDM6A	0.968	1
C3orf70	ZFP36L2	0.968	1
C3orf70	RIPK4	0.968	1
C3orf70	ZNF626	0.968	1
C3orf70	Del_18q23	0.968	1
CFHR4	PIGS	0.968	1
CFHR4	POTEG	0.968	1
CFHR4	SARNP	0.968	1
CFHR4	Amp_6p22.3	0.968	1
ERBB3	ATAD5	0.968	1
HIST1H2AG	Amp_10p14	0.968	1
HORMAD1	Amp_7p21.1	0.968	1
HRAS	ZNF626	0.968	1
HRAS	3p-Amp	0.968	1
IDH1	MARK2	0.968	1
IDH1	MBD1	0.968	1
IDH1	PPP4R1	0.968	1
IDH1	USP28	0.968	1
NFE2L2	FAM47C	0.968	1
PIGS	CTCF	0.968	1
PIGS	DPYS	0.968	1
PIGS	MBD1	0.968	1
PIK3CA	ARID2	0.968	1
POTEG	PROS1	0.968	1
POTEG	MARK2	0.968	1
POTEG	Del_Xp11.3	0.968	1
PROS1	SARNP	0.968	1
PROS1	ZNF486	0.968	1
PROS1	UGP2	0.968	1
SARNP	CTCF	0.968	1
SARNP	PPP4R1	0.968	1
SARNP	USP28	0.968	1
SARNP	Del_Xp11.3	0.968	1
SF3B1	TRERF1	0.968	1
STAG2	4q-Del	0.968	1
TBC1D12	ITGA4	0.968	1
TBC1D12	PPARGC1A	0.968	1
TBC1D12	TXNIP	0.968	1
TBC1D12	CNOT3	0.968	1
TBC1D12	ZNF773	0.968	1
TBC1D12	Del_17p12	0.968	1
ZFP36L2	ACTB	0.968	1
ZNF486	CTCF	0.968	1
ZNF486	PPP4R1	0.968	1
ACTB	SLC9A4	0.968	1
ACTB	3p-Amp	0.968	1
ARID2	SPTAN1	0.968	1
CTCF	FUS	0.968	1
MARK2	OR10Z1	0.968	1
MBD1	OR10Z1	0.968	1
MBD1	UGP2	0.968	1
MYO16	CNOT1	0.968	1
PSMC6	Amp_7p21.1	0.968	1
PSMC6	Del_11q25	0.968	1
RARG	Amp_19q13.43	0.968	1
RBM10	16p-Del	0.968	1
RBM10	Del_11p15.5	0.968	1
RIPK4	SLC9A4	0.968	1
RIPK4	8q-Amp	0.968	1
SLC9A4	Del_18q23	0.968	1
STK32B	Amp_7p21.1	0.968	1
UGP2	Del_9p21.3	0.968	1
USP28	FUS	0.968	1
ZBTB47	Amp_12q15	0.968	1
FUT5	22q-Del	0.968	1
GNA13	Amp_12q15	0.968	1
GNA13	Del_6p25.3	0.968	1
TMCO4	Del_16q23.1	0.968	1
20p-Amp	8p-Del	0.968	1
20q-Amp	Del_6p25.3	0.968	1
3p-Amp	8q-Amp	0.968	1
3p-Amp	Del_18q23	0.968	1
7q-Amp	Del_5q12.1	0.968	1
10q-Del	Amp_1q23.3	0.968	1
19p-Del	Amp_10p14	0.968	1
4q-Del	Del_16p13.3	0.968	1
Amp_5p15.33	Amp_8p11.21	0.968	1
Amp_6q21	Amp_7p21.1	0.968	1
Amp_13q22.1	Del_6p25.3	0.968	1
Amp_19q13.43	Del_7q36.3	0.968	1
Amp_22q12.2	Del_9p23	0.968	1
Del_1q32.1	Del_16q23.1	0.968	1
Del_4q22.1	Del_22q13.32	0.968	1
Del_6p25.3	Del_Xq21.33	0.968	1
Del_16q23.1	Del_Xq21.33	0.968	1
ARID1A	Amp_1p34.2	0.969	1
ASXL2	KRAS	0.969	1
ASXL2	RUNX1	0.969	1
ASXL2	IKZF2	0.969	1
ASXL2	WAC	0.969	1
ASXL2	ZNF750	0.969	1
ATM	KDM5A	0.969	1
ATM	OGDH	0.969	1
CNNM4	ZFP36L1	0.969	1
CNNM4	Amp_1q23.3	0.969	1
COPZ2	Del_22q13.32	0.969	1
CSMD3	Amp_13q22.1	0.969	1
FGFR3	TSC1	0.969	1
GPS2	ZFP36L1	0.969	1
GPS2	Amp_1p34.2	0.969	1
GTF2I	RHOA	0.969	1
KDM6A	Amp_13q22.1	0.969	1
METTL3	ITGA4	0.969	1
METTL3	NEK11	0.969	1
METTL3	PPARGC1A	0.969	1
METTL3	SSH3	0.969	1
METTL3	DNAH6	0.969	1
MIPOL1	Amp_1p34.2	0.969	1
NFE2L3	Amp_11q13.3	0.969	1
NFE2L3	Del_10q23.31	0.969	1
PIK3CA	ASXL1	0.969	1
PKHD1	20q-Amp	0.969	1
PLCXD3	Del_2q34	0.969	1
PTEN	Del_10q23.31	0.969	1
RHOA	SSH3	0.969	1
RHOA	TXNIP	0.969	1
RHOB	Amp_8p11.21	0.969	1
RUNX1	Amp_17q12	0.969	1
SF1	Amp_1p34.2	0.969	1
SHANK1	ITGA4	0.969	1
SHANK1	PPARGC1A	0.969	1
SHANK1	SSH3	0.969	1
ZFP36L1	Del_13q14.2	0.969	1
ACTB	SPTAN1	0.969	1
AGR3	Del_2q34	0.969	1
ARID2	NKX2-2	0.969	1
DCDC1	Amp_17q12	0.969	1
DPYS	18q-Del	0.969	1
EXOSC10	Del_10q23.31	0.969	1
MED13	3q-Amp	0.969	1
MYO16	GNA13	0.969	1
NAA15	Del_11q23.3	0.969	1
NCOA1	Del_4q34.2	0.969	1
NEK11	Amp_1q21.3	0.969	1
NKX2-2	Amp_1q23.3	0.969	1
PARD3	6q-Del	0.969	1
PPARG	18q-Del	0.969	1
RIPK4	SPTAN1	0.969	1
SLC9A4	Amp_3p25.2	0.969	1
TFG	Amp_1q23.3	0.969	1
THRAP3	Del_10q23.31	0.969	1
ZNF626	Amp_3p25.2	0.969	1
BAP1	Amp_17q12	0.969	1
DNAH6	Amp_1q21.3	0.969	1
GNA13	Del_13q14.2	0.969	1
SPTAN1	3p-Amp	0.969	1
TMCO4	Del_9p23	0.969	1
TMCO4	Del_13q14.2	0.969	1
ZNF773	Amp_5p15.33	0.969	1
17q-Amp	16p-Del	0.969	1
1q-Amp	Amp_11q13.3	0.969	1
20q-Amp	Amp_16p13.2	0.969	1
20q-Amp	Del_9p23	0.969	1
3p-Amp	Amp_7p11.2	0.969	1
14q-Del	Amp_7p21.1	0.969	1
14q-Del	Del_11q25	0.969	1
22q-Del	Del_1q32.1	0.969	1
22q-Del	Del_Xq21.33	0.969	1
Amp_3q26.33	Del_1p36.11	0.969	1
Amp_17q12	Del_16q23.1	0.969	1
Amp_17q23.3	Del_18q23	0.969	1
Del_1q32.1	Del_9p23	0.969	1
Del_13q14.2	Del_Xq21.33	0.969	1
CDKN2A	NF2	0.97	1
CDKN2A	EPHA2	0.97	1
CDKN2A	KDM5A	0.97	1
CDKN2A	NCOA1	0.97	1
CDKN2A	OGDH	0.97	1
COPZ2	ERBB3	0.97	1
COPZ2	CDKN2AIPNL	0.97	1
ELF3	ZBTB7B	0.97	1
ELF3	Del_4q34.2	0.97	1
EP300	TRERF1	0.97	1
ERBB3	METTL3	0.97	1
ERBB3	PTTG1IP	0.97	1
ERCC2	RHOB	0.97	1
FBXW7	ITGA4	0.97	1
FBXW7	SSH3	0.97	1
GTF2I	PKHD1	0.97	1
GTF2I	Amp_16p13.2	0.97	1
HORMAD1	RHOB	0.97	1
KLF5	ZNF185	0.97	1
KPTN	CDKN2AIPNL	0.97	1
METTL3	Del_16p13.3	0.97	1
NF2	RB1	0.97	1
NF2	TP53	0.97	1
PIGS	Del_15q13.1	0.97	1
PKHD1	ITGA4	0.97	1
PKHD1	SSH3	0.97	1
PLCXD3	EPHA2	0.97	1
PLCXD3	HFM1	0.97	1
PLCXD3	KDM5A	0.97	1
POTEG	10q-Del	0.97	1
PROS1	ASXL1	0.97	1
PSIP1	FAT1	0.97	1
PSIP1	Del_9p21.3	0.97	1
PTTG1IP	CDKN2AIPNL	0.97	1
RB1	Amp_10p14	0.97	1
RB1	Del_19p13.3	0.97	1
RPTN	NCOA1	0.97	1
RPTN	OGDH	0.97	1
SARNP	10q-Del	0.97	1
TP53	Amp_8p11.21	0.97	1
ZNF180	OGDH	0.97	1
AGR3	HFM1	0.97	1
AGR3	NCOA1	0.97	1
AGR3	OGDH	0.97	1
ATAD5	PPARGC1A	0.97	1
ATAD5	SSH3	0.97	1
CPD	5q-Del	0.97	1
DDX3X	OGDH	0.97	1
DLX6	7p-Amp	0.97	1
DPYS	Del_12p13.1	0.97	1
EPHA2	RBP2	0.97	1
GLTP	Amp_3p25.2	0.97	1
HSP90AA1	PPP4R1	0.97	1
HSP90AA1	USP28	0.97	1
IL10RB	8p-Del	0.97	1
KDM5A	NDC80	0.97	1
KDM5A	RBP2	0.97	1
KDM5A	19q-Amp	0.97	1
MARK2	Del_12p13.1	0.97	1
MBD1	ASXL1	0.97	1
MED13	PPARGC1A	0.97	1
MED13	SSH3	0.97	1
NAA15	OGDH	0.97	1
NAA15	Del_9p23	0.97	1
NCOA1	NDC80	0.97	1
NCOA1	RARG	0.97	1
NCOA1	DAZAP1	0.97	1
NEK11	Amp_16p13.2	0.97	1
OR10Z1	6q-Del	0.97	1
OR10Z1	Del_15q13.1	0.97	1
PARD3	ZNF185	0.97	1
RBM26	Del_11q23.3	0.97	1
TFG	Del_2q34	0.97	1
ZNF626	Del_8p21.3	0.97	1
ADC	20q-Amp	0.97	1
ADC	Amp_4p16.3	0.97	1
ADC	Del_11q23.3	0.97	1
ARID1B	FUT5	0.97	1
DAZAP1	OGDH	0.97	1
DAZAP1	20q-Amp	0.97	1
FUS	3q-Amp	0.97	1
SPTAN1	5q-Del	0.97	1
ZNF185	7p-Amp	0.97	1
19q-Amp	Amp_4p16.3	0.97	1
19q-Amp	Del_9p23	0.97	1
7p-Amp	Del_6p25.3	0.97	1
10q-Del	Amp_10p14	0.97	1
16p-Del	Del_4q34.2	0.97	1
22q-Del	9q-Del	0.97	1
22q-Del	Del_4q34.2	0.97	1
4q-Del	Amp_13q22.1	0.97	1
4q-Del	Del_16q23.1	0.97	1
9p-Del	Del_19p13.3	0.97	1
Amp_1p34.2	Amp_19q13.43	0.97	1
Amp_1q23.3	Del_7q36.3	0.97	1
Amp_4p16.3	Del_7q36.3	0.97	1
Amp_5p15.33	Del_22q13.32	0.97	1
Amp_6p22.3	Del_22q13.32	0.97	1
Amp_7p21.1	Del_14q24.1	0.97	1
Amp_11q13.3	Amp_19q13.43	0.97	1
Del_2q34	Del_18q23	0.97	1
Del_9p21.3	Del_12p13.1	0.97	1
Del_11q25	Del_14q24.1	0.97	1
ASXL2	C12orf43	0.971	1
ASXL2	TGIF2LX	0.971	1
ASXL2	CCNE2	0.971	1
ASXL2	19p-Del	0.971	1
ATM	RUNX1	0.971	1
ATM	CASP8	0.971	1
ATM	DCDC1	0.971	1
ATM	THRAP3	0.971	1
ATM	ZNF750	0.971	1
ATM	1q-Amp	0.971	1
BTG2	CTNNB1	0.971	1
BTG2	RUNX1	0.971	1
BTG2	CASP8	0.971	1
BTG2	WAC	0.971	1
BTG2	ZNF750	0.971	1
BTG2	9q-Del	0.971	1
BTG2	Del_1p36.11	0.971	1
C12orf43	FOXA1	0.971	1
C12orf43	NFE2L3	0.971	1
C12orf43	RUNX1	0.971	1
C12orf43	WAC	0.971	1
C12orf43	1q-Amp	0.971	1
C3orf70	Del_11p15.5	0.971	1
CNNM4	HORMAD1	0.971	1
CNNM4	ZBTB7B	0.971	1
CNNM4	Amp_3p25.2	0.971	1
CNNM4	Amp_6q21	0.971	1
CREBBP	TRERF1	0.971	1
CREBBP	CNOT1	0.971	1
CSMD3	IDH1	0.971	1
CSMD3	SARNP	0.971	1
CSMD3	ZNF486	0.971	1
CSMD3	UGP2	0.971	1
CTNNB1	TGIF2LX	0.971	1
CTNNB1	IL10RB	0.971	1
CTNNB1	TAF11	0.971	1
CTNNB1	SCARF2	0.971	1
DIAPH2	TBC1D12	0.971	1
ELF3	ITGA4	0.971	1
ELF3	NEK11	0.971	1
ERBB2	ERCC2	0.971	1
ERBB3	SF3B1	0.971	1
ERBB3	22q-Del	0.971	1
FGFR3	Del_18q23	0.971	1
FOXA1	TGIF2LX	0.971	1
FOXA1	DENND5B	0.971	1
FOXA1	LETMD1	0.971	1
FOXA1	PHLDA3	0.971	1
FOXA1	SNRPB	0.971	1
FOXA1	7q-Amp	0.971	1
FOXQ1	IL10RB	0.971	1
FOXQ1	19p-Del	0.971	1
GPR50	HIST1H2AG	0.971	1
GPR50	NHLRC1	0.971	1
GPR50	PSIP1	0.971	1
GPR50	PHLDA3	0.971	1
GPS2	Amp_6q21	0.971	1
GTF2I	UBA52	0.971	1
HIST1H2AG	DCDC1	0.971	1
HIST1H2AG	IKZF2	0.971	1
HIST1H2AG	BAP1	0.971	1
HIST1H2AG	CDH1	0.971	1
HORMAD1	MIPOL1	0.971	1
IDH1	Amp_8q22.3	0.971	1
KRAS	TGIF2LX	0.971	1
KRAS	DENND5B	0.971	1
KRAS	19p-Del	0.971	1
MIPOL1	ZBTB7B	0.971	1
NF2	TFG	0.971	1
NFE2L3	NHLRC1	0.971	1
NFE2L3	PSIP1	0.971	1
NFE2L3	TGIF2LX	0.971	1
NFE2L3	CCNE2	0.971	1
NFE2L3	DENND5B	0.971	1
NFE2L3	PHLDA3	0.971	1
NFE2L3	SCARF2	0.971	1
NFE2L3	15q-Del	0.971	1
NFE2L3	19p-Del	0.971	1
NHLRC1	CASP8	0.971	1
NHLRC1	ZNF750	0.971	1
NHLRC1	EPS8	0.971	1
NRAS	ITGA4	0.971	1
NRAS	TXNIP	0.971	1
NRAS	DNAH6	0.971	1
PSIP1	THRAP3	0.971	1
PSIP1	CDH1	0.971	1
PSIP1	1q-Amp	0.971	1
PTEN	TGIF2LX	0.971	1
PTEN	SCARF2	0.971	1
PTEN	Del_2q37.1	0.971	1
RUNX1	IL10RB	0.971	1
RUNX1	LETMD1	0.971	1
SF1	CNOT3	0.971	1
SF1	ZNF773	0.971	1
TBC1D12	9q-Del	0.971	1
TGIF2LX	CASP8	0.971	1
TGIF2LX	IKZF2	0.971	1
TGIF2LX	THRAP3	0.971	1
TGIF2LX	WAC	0.971	1
TGIF2LX	BAP1	0.971	1
TGIF2LX	CDH1	0.971	1
TGIF2LX	EPS8	0.971	1
TGIF2LX	1q-Amp	0.971	1
ZBTB7B	NKX2-2	0.971	1
ZFP36L1	ZFP36L2	0.971	1
ZFP36L1	Amp_22q12.2	0.971	1
ZNF486	Amp_8q22.3	0.971	1
ACTB	ARID2	0.971	1
ACTB	Del_16q23.1	0.971	1
ARID2	CDKN2AIPNL	0.971	1
CASP8	IL10RB	0.971	1
CASP8	LETMD1	0.971	1
CASP8	SCARF2	0.971	1
CCNE2	WAC	0.971	1
CCNE2	ZNF750	0.971	1
CCNE2	EPS8	0.971	1
CCNE2	1q-Amp	0.971	1
CCNE2	Amp_17q12	0.971	1
CDKN2AIPNL	Amp_1p34.2	0.971	1
DCDC1	RBM26	0.971	1
DCDC1	SNRPB	0.971	1
DCDC1	7q-Amp	0.971	1
DENND5B	EPS8	0.971	1
DLX6	17p-Del	0.971	1
EXOSC10	RBM26	0.971	1
EXOSC10	SNRPB	0.971	1
EXOSC10	Del_2q37.1	0.971	1
GLTP	ITGA4	0.971	1
GLTP	NEK11	0.971	1
GLTP	PPARGC1A	0.971	1
GLTP	DNAH6	0.971	1
IKZF2	LETMD1	0.971	1
IKZF2	RBM26	0.971	1
IKZF2	SCARF2	0.971	1
IL10RB	BAP1	0.971	1
IL10RB	CDH1	0.971	1
IL10RB	EPS8	0.971	1
ITGA4	ZBTB47	0.971	1
ITGA4	UNC93B1	0.971	1
LETMD1	THRAP3	0.971	1
LETMD1	CDH1	0.971	1
LETMD1	Amp_17q12	0.971	1
NEK11	UBA52	0.971	1
NEK11	5p-Amp	0.971	1
NKX2-2	CNOT3	0.971	1
NKX2-2	ZNF773	0.971	1
NKX2-2	Amp_3p25.2	0.971	1
PHLDA3	THRAP3	0.971	1
PPARGC1A	UBA52	0.971	1
PPARGC1A	ZBTB47	0.971	1
PPARGC1A	UNC93B1	0.971	1
RBM10	Del_6q27	0.971	1
RBM26	WAC	0.971	1
SLC9A4	Del_17p12	0.971	1
SNRPB	EPS8	0.971	1
SNRPB	1q-Amp	0.971	1
SSH3	UBA52	0.971	1
STK32B	TFG	0.971	1
TAF11	ZNF750	0.971	1
TAF11	Amp_17q12	0.971	1
THRAP3	SCARF2	0.971	1
THRAP3	7q-Amp	0.971	1
THRAP3	15q-Del	0.971	1
THRAP3	Del_2q37.1	0.971	1
TXNIP	UBA52	0.971	1
TXNIP	UNC93B1	0.971	1
TXNIP	Del_3p14.2	0.971	1
UBA52	DNAH6	0.971	1
WAC	Del_4q34.2	0.971	1
ZBTB47	DNAH6	0.971	1
CDH1	15q-Del	0.971	1
CNOT1	Del_6q27	0.971	1
CUL1	Amp_1p34.2	0.971	1
CUL1	Del_16q23.1	0.971	1
DNAH6	5p-Amp	0.971	1
EPS8	SCARF2	0.971	1
EPS8	Del_4q34.2	0.971	1
FUT5	11p-Del	0.971	1
FUT5	17p-Del	0.971	1
3p-Amp	Amp_13q22.1	0.971	1
3p-Amp	Del_16q23.1	0.971	1
8q-Amp	Amp_10p14	0.971	1
11p-Del	Del_8p23.3	0.971	1
8p-Del	Amp_8p11.23	0.971	1
Del_16p13.3	Del_18q23	0.971	1
CSMD3	CTCF	0.972	1
CSMD3	HSP90AA1	0.972	1
CSMD3	ASXL1	0.972	1
ERBB3	UBA52	0.972	1
ERBB3	TMCO4	0.972	1
ERBB3	UNC93B1	0.972	1
ERCC2	DPYS	0.972	1
ERCC2	EPHA2	0.972	1
ERCC2	NCOA1	0.972	1
ERCC2	PPP4R1	0.972	1
ERCC2	Amp_4p16.3	0.972	1
FOXA1	11q-Del	0.972	1
FOXA1	Del_19p13.3	0.972	1
FOXQ1	Del_17p12	0.972	1
GPS2	FAT1	0.972	1
KLF5	CPD	0.972	1
KLF5	CNOT1	0.972	1
METTL3	CDK12	0.972	1
METTL3	14q-Del	0.972	1
METTL3	4p-Del	0.972	1
PLCXD3	Amp_8p11.21	0.972	1
PLCXD3	Del_2q22.1	0.972	1
TP53	Amp_1q21.3	0.972	1
CDK12	Del_3p14.2	0.972	1
DDX3X	Del_2q22.1	0.972	1
IKZF2	11q-Del	0.972	1
MED13	Del_8p23.3	0.972	1
SF3B3	ARID1B	0.972	1
ADC	Amp_8p11.21	0.972	1
ARID1B	CNOT1	0.972	1
ARID1B	Amp_1q23.3	0.972	1
CDH1	5q-Del	0.972	1
CNOT1	Del_18q23	0.972	1
FAM47C	7p-Amp	0.972	1
20p-Amp	Del_5q12.1	0.972	1
20p-Amp	Del_6p25.3	0.972	1
10q-Del	Del_11p15.5	0.972	1
14q-Del	Amp_17q23.3	0.972	1
18q-Del	Del_14q24.1	0.972	1
6q-Del	Del_11p15.5	0.972	1
8p-Del	Del_3p14.2	0.972	1
Amp_1q21.3	Amp_8p11.21	0.972	1
Amp_1q21.3	Del_4q34.2	0.972	1
Amp_1q23.3	Del_5q12.1	0.972	1
Amp_8p11.21	Del_4q22.1	0.972	1
Amp_8q22.3	Amp_16p13.2	0.972	1
Amp_10p14	Del_8p23.3	0.972	1
Amp_13q22.1	Del_22q13.32	0.972	1
Del_1p36.11	Del_17p12	0.972	1
Del_2q22.1	Del_4q22.1	0.972	1
BTG2	11q-Del	0.973	1
C3orf70	NEK11	0.973	1
C3orf70	PPARGC1A	0.973	1
C3orf70	TXNIP	0.973	1
CDKN1A	PHLDA3	0.973	1
CDKN1A	TAF11	0.973	1
CFHR4	CPD	0.973	1
CFHR4	CNOT1	0.973	1
COPZ2	Del_14q24.1	0.973	1
DIAPH2	PROS1	0.973	1
DIAPH2	CTCF	0.973	1
ELF3	TSC1	0.973	1
ERBB3	SPTAN1	0.973	1
FBXW7	IDH1	0.973	1
FBXW7	PARD3	0.973	1
FGFR3	UGP2	0.973	1
GPS2	Del_11p15.5	0.973	1
GTF2I	ZFP36L2	0.973	1
GTF2I	ACTB	0.973	1
HIST1H2AG	Del_13q14.2	0.973	1
HIST1H3B	PIGS	0.973	1
HIST1H3B	ZNF486	0.973	1
HIST1H3B	OR10Z1	0.973	1
HIST1H3B	UGP2	0.973	1
HIST1H3B	ARID1B	0.973	1
IDH1	STAG2	0.973	1
IDH1	MED13	0.973	1
IDH1	TMCO4	0.973	1
IDH1	Amp_16p13.2	0.973	1
IDH1	Del_1q32.1	0.973	1
IDH1	Del_Xq21.33	0.973	1
KLF5	17q-Amp	0.973	1
KLF5	Del_Xq21.33	0.973	1
KPTN	Del_14q24.1	0.973	1
METTL3	DAZAP1	0.973	1
NF1	PPARGC1A	0.973	1
NF1	TXNIP	0.973	1
NHLRC1	Del_19p13.3	0.973	1
PIGS	STAG2	0.973	1
PIGS	GNA13	0.973	1
PIGS	Del_1q32.1	0.973	1
PIGS	Del_Xq21.33	0.973	1
PIK3CA	RPTN	0.973	1
PIK3CA	NAA15	0.973	1
PIK3CA	UGP2	0.973	1
PKHD1	SARNP	0.973	1
PKHD1	OR10Z1	0.973	1
PKHD1	PARD3	0.973	1
PKHD1	UGP2	0.973	1
PLCXD3	RHOA	0.973	1
POTEG	TMCO4	0.973	1
POTEG	17q-Amp	0.973	1
POTEG	Amp_8p11.23	0.973	1
PROS1	SF3B3	0.973	1
PROS1	CNOT1	0.973	1
PSIP1	5p-Amp	0.973	1
RB1	Del_8p23.3	0.973	1
RXRA	15q-Del	0.973	1
SARNP	STAG2	0.973	1
SARNP	ATAD5	0.973	1
SARNP	MED13	0.973	1
SARNP	TMCO4	0.973	1
SARNP	Amp_8p11.23	0.973	1
SARNP	Amp_16p13.2	0.973	1
SARNP	Del_1q32.1	0.973	1
SARNP	Del_Xq21.33	0.973	1
STAG2	ZNF486	0.973	1
STAG2	OR10Z1	0.973	1
TGIF2LX	11q-Del	0.973	1
TSC1	Amp_17q23.3	0.973	1
ZFP36L2	NEK11	0.973	1
ZFP36L2	PPARGC1A	0.973	1
ZFP36L2	SSH3	0.973	1
ZFP36L2	DNAH6	0.973	1
ZNF486	ATAD5	0.973	1
ZNF486	Del_1q32.1	0.973	1
ACTB	ITGA4	0.973	1
ATAD5	OR10Z1	0.973	1
ATAD5	PARD3	0.973	1
ATAD5	ARID1B	0.973	1
CCNE2	Del_13q14.2	0.973	1
CPD	MARK2	0.973	1
CPD	PPARG	0.973	1
CPD	Del_Xp11.3	0.973	1
CTCF	SF3B3	0.973	1
CTCF	FAM47C	0.973	1
DPYS	RBM10	0.973	1
ITGA4	SLC9A4	0.973	1
ITGA4	ZNF626	0.973	1
LETMD1	Del_13q14.2	0.973	1
MED13	UGP2	0.973	1
MYO16	15q-Del	0.973	1
OR10Z1	Del_16p13.3	0.973	1
PPARG	SF3B3	0.973	1
PPARGC1A	ZNF626	0.973	1
RIPK4	SSH3	0.973	1
RIPK4	TXNIP	0.973	1
RIPK4	DNAH6	0.973	1
SF3B3	Del_Xp11.3	0.973	1
SLC9A4	SSH3	0.973	1
SLC9A4	TXNIP	0.973	1
SNRPB	Del_19p13.3	0.973	1
SSH3	ZNF626	0.973	1
TXNIP	ZNF626	0.973	1
UGP2	Del_1q32.1	0.973	1
ARID1B	TMCO4	0.973	1
ARID1B	Amp_3q26.33	0.973	1
ARID1B	Amp_16p13.2	0.973	1
FAM47C	Del_Xp11.3	0.973	1
FUS	GNA13	0.973	1
FUS	TMCO4	0.973	1
FUS	17q-Amp	0.973	1
FUS	Del_Xq21.33	0.973	1
TMCO4	4q-Del	0.973	1
5p-Amp	7q-Amp	0.973	1
7p-Amp	Amp_16p13.2	0.973	1
7p-Amp	Del_10q23.31	0.973	1
7p-Amp	Del_Xq21.33	0.973	1
7q-Amp	Amp_11q22.2	0.973	1
15q-Del	Del_2q22.1	0.973	1
19p-Del	Del_13q14.2	0.973	1
Amp_5p15.33	Del_19p13.3	0.973	1
Amp_6q21	Amp_22q12.2	0.973	1
Amp_11q13.3	Del_16p13.3	0.973	1
Del_2q34	Del_11q25	0.973	1
Del_13q14.2	Del_17p12	0.973	1
C12orf43	5p-Amp	0.974	1
CDKN1A	5q-Del	0.974	1
CFHR4	Amp_8p11.23	0.974	1
CREBBP	ERCC2	0.974	1
EP300	HIST1H3B	0.974	1
EP300	Del_Xq21.33	0.974	1
ERBB2	AGR3	0.974	1
ERBB2	RBP2	0.974	1
ERBB2	ADC	0.974	1
ERBB3	NF1	0.974	1
ERCC2	KPTN	0.974	1
FBXW7	ATAD5	0.974	1
FGFR3	PPP4R1	0.974	1
HORMAD1	Del_17p12	0.974	1
KDM6A	RXRA	0.974	1
KDM6A	MYO16	0.974	1
METTL3	ZNF180	0.974	1
METTL3	NAA15	0.974	1
METTL3	NDC80	0.974	1
METTL3	Amp_11q13.3	0.974	1
NF1	Del_15q13.1	0.974	1
NRAS	19q-Amp	0.974	1
PIK3CA	18q-Del	0.974	1
PKHD1	Amp_16p13.2	0.974	1
RPTN	GLTP	0.974	1
RPTN	HLA-A	0.974	1
RPTN	Del_15q13.1	0.974	1
TP53	16p-Del	0.974	1
TSC1	ARID2	0.974	1
TSC1	Amp_1p34.2	0.974	1
ZNF180	UBA52	0.974	1
ZNF180	UNC93B1	0.974	1
ZNF180	6q-Del	0.974	1
ZNF511	Del_2q22.1	0.974	1
ATAD5	MED13	0.974	1
CCNE2	5p-Amp	0.974	1
DPYS	Del_16p13.3	0.974	1
GLTP	NDC80	0.974	1
GLTP	Del_7q36.3	0.974	1
HSP90AA1	SPTAN1	0.974	1
NAA15	HLA-A	0.974	1
NAA15	10q-Del	0.974	1
NDC80	UNC93B1	0.974	1
NDC80	10q-Del	0.974	1
NDC80	Del_15q13.1	0.974	1
NKX2-2	Amp_8p11.21	0.974	1
RARG	UBA52	0.974	1
RARG	Del_15q13.1	0.974	1
SSH3	Del_9p21.3	0.974	1
TAF11	5p-Amp	0.974	1
TFG	Del_2q22.1	0.974	1
CUL1	Del_22q13.32	0.974	1
GNA13	Del_8p23.3	0.974	1
SPTAN1	Del_11p15.5	0.974	1
10q-Del	Amp_8p11.23	0.974	1
15q-Del	Amp_1q23.3	0.974	1
22q-Del	Del_11p15.5	0.974	1
4q-Del	Del_22q13.32	0.974	1
5q-Del	Del_16q23.1	0.974	1
Amp_3q26.33	Del_11q23.3	0.974	1
Amp_4q13.3	Amp_19q12	0.974	1
Amp_4q13.3	Del_15q13.1	0.974	1
Amp_7p21.1	Del_13q14.2	0.974	1
Amp_8q22.3	Del_6q27	0.974	1
Amp_17q23.3	Del_14q24.1	0.974	1
Amp_19q12	Del_7q36.3	0.974	1
Del_6p25.3	Del_19p13.3	0.974	1
Del_10q23.31	Del_11q23.3	0.974	1
ARID1A	PHLDA3	0.975	1
BTG2	CFHR4	0.975	1
BTG2	PROS1	0.975	1
BTG2	DPYS	0.975	1
BTG2	MARK2	0.975	1
BTG2	MBD1	0.975	1
BTG2	Del_Xp11.3	0.975	1
C12orf43	CFHR4	0.975	1
C12orf43	CTCF	0.975	1
C12orf43	MBD1	0.975	1
C12orf43	PPP4R1	0.975	1
C12orf43	USP28	0.975	1
CDKN1A	PSIP1	0.975	1
CDKN1A	RBM26	0.975	1
CDKN2A	METTL3	0.975	1
CDKN2A	SHANK1	0.975	1
CFHR4	TGIF2LX	0.975	1
CFHR4	SNRPB	0.975	1
CTNNB1	Amp_19q13.43	0.975	1
ELF3	Del_17p12	0.975	1
EP300	ITGA4	0.975	1
EP300	SSH3	0.975	1
ERBB2	DENND5B	0.975	1
ERCC2	6q-Del	0.975	1
FOXA1	NCOA1	0.975	1
FOXQ1	NCOA1	0.975	1
GPR50	TP53	0.975	1
GPR50	Amp_19q13.43	0.975	1
GPS2	14q-Del	0.975	1
HIST1H2AG	PROS1	0.975	1
HIST1H2AG	PPARG	0.975	1
HIST1H2AG	Amp_5p15.33	0.975	1
HIST1H2AG	Del_Xp11.3	0.975	1
HORMAD1	Amp_10p14	0.975	1
IDH1	NF1	0.975	1
KDM6A	SF3B3	0.975	1
KRAS	EPHA2	0.975	1
METTL3	RHOB	0.975	1
MIPOL1	CDK12	0.975	1
NF1	POTEG	0.975	1
NFE2L3	TP53	0.975	1
NFE2L3	OGDH	0.975	1
NHLRC1	PPARG	0.975	1
PROS1	IL10RB	0.975	1
PROS1	LETMD1	0.975	1
PSIP1	11q-Del	0.975	1
PSIP1	5q-Del	0.975	1
PTEN	EPHA2	0.975	1
PTEN	KDM5A	0.975	1
RB1	8p-Del	0.975	1
RXRA	Del_2q34	0.975	1
TBC1D12	AGR3	0.975	1
TBC1D12	Del_8p21.3	0.975	1
TGIF2LX	CTCF	0.975	1
TGIF2LX	DPYS	0.975	1
TGIF2LX	PPARG	0.975	1
TGIF2LX	PPP4R1	0.975	1
TP53	EXOSC10	0.975	1
TP53	Del_8p21.3	0.975	1
ZBTB7B	Amp_7p11.2	0.975	1
AGR3	Del_6q27	0.975	1
AGR3	Del_11q25	0.975	1
CASP8	HFM1	0.975	1
CASP8	OGDH	0.975	1
CCNE2	MBD1	0.975	1
CCNE2	PPARG	0.975	1
CDKN2AIPNL	14q-Del	0.975	1
CPD	FUT5	0.975	1
CPD	ZNF185	0.975	1
CTCF	LETMD1	0.975	1
DCDC1	NCOA1	0.975	1
DCDC1	Amp_4p16.3	0.975	1
DLX6	FAM47C	0.975	1
DPYS	TAF11	0.975	1
DPYS	SCARF2	0.975	1
EPHA2	THRAP3	0.975	1
HFM1	IKZF2	0.975	1
IL10RB	MBD1	0.975	1
IL10RB	PPARG	0.975	1
IL10RB	PPP4R1	0.975	1
KDM5A	Amp_6p22.3	0.975	1
LETMD1	PPARG	0.975	1
LETMD1	PPP4R1	0.975	1
LETMD1	Amp_19q13.43	0.975	1
MARK2	19p-Del	0.975	1
MBD1	PHLDA3	0.975	1
MBD1	SNRPB	0.975	1
MBD1	TAF11	0.975	1
NCOA1	ZNF750	0.975	1
NKX2-2	14q-Del	0.975	1
PHLDA3	PPARG	0.975	1
PPP4R1	SCARF2	0.975	1
SF3B3	FUT5	0.975	1
SNRPB	Del_Xp11.3	0.975	1
TAF11	Amp_5p15.33	0.975	1
WAC	OGDH	0.975	1
CNOT1	ZNF185	0.975	1
CNOT3	Amp_7p11.2	0.975	1
DAZAP1	Del_11q25	0.975	1
FAM47C	ZNF185	0.975	1
1q-Amp	Amp_4p16.3	0.975	1
5p-Amp	Amp_11q22.2	0.975	1
10q-Del	Del_12p13.1	0.975	1
17p-Del	Del_2q22.1	0.975	1
8p-Del	9p-Del	0.975	1
8p-Del	Amp_20q11.21	0.975	1
8p-Del	Del_18q23	0.975	1
9q-Del	Del_2q34	0.975	1
Amp_1q23.3	Amp_12q15	0.975	1
Amp_1q23.3	Del_3p14.2	0.975	1
Amp_6q21	Amp_7p11.2	0.975	1
Amp_8p11.23	Del_4q22.1	0.975	1
Amp_10p14	Del_13q14.2	0.975	1
Amp_22q12.2	Del_2q22.1	0.975	1
Del_1p36.11	Del_2q34	0.975	1
Del_5q12.1	Del_9p21.3	0.975	1
Del_8p21.3	Del_11q25	0.975	1
ASXL2	PPP4R1	0.976	1
ASXL2	USP28	0.976	1
C3orf70	ADC	0.976	1
C3orf70	DAZAP1	0.976	1
CNNM4	KDM6A	0.976	1
CNNM4	ZNF511	0.976	1
CNNM4	Amp_19q12	0.976	1
COPZ2	Del_8p21.3	0.976	1
CREBBP	NDC80	0.976	1
CSMD3	DLX6	0.976	1
ELF3	AGR3	0.976	1
ELF3	ADC	0.976	1
ELF3	DAZAP1	0.976	1
ERBB2	NKX2-2	0.976	1
ERBB3	Amp_12q15	0.976	1
ERBB3	Del_6p25.3	0.976	1
FBXW7	ZNF180	0.976	1
FBXW7	DDX3X	0.976	1
FOXA1	9p-Del	0.976	1
GPS2	ZNF511	0.976	1
HIST1H3B	ASXL1	0.976	1
HIST1H3B	Amp_1q23.3	0.976	1
HORMAD1	SF3B1	0.976	1
HORMAD1	22q-Del	0.976	1
KDM6A	NKX2-2	0.976	1
KPTN	Del_8p21.3	0.976	1
MIPOL1	NKX2-2	0.976	1
MIPOL1	TFG	0.976	1
NF2	MYO16	0.976	1
NF2	16p-Del	0.976	1
NRAS	18q-Del	0.976	1
NRAS	Del_8p21.3	0.976	1
NRAS	Del_14q24.1	0.976	1
PKHD1	Amp_4q13.3	0.976	1
PKHD1	Del_7q36.3	0.976	1
PLCXD3	ACTB	0.976	1
PLCXD3	RIPK4	0.976	1
PLCXD3	CUL1	0.976	1
PSIP1	Del_11p15.5	0.976	1
RB1	RUNX1	0.976	1
RB1	EXOSC10	0.976	1
RPTN	TBC1D12	0.976	1
RPTN	ATAD5	0.976	1
RXRA	ARID2	0.976	1
SF3B1	PSMC6	0.976	1
TSC1	CNOT1	0.976	1
ZFP36L1	16p-Del	0.976	1
ZNF511	TFG	0.976	1
ACTB	DAZAP1	0.976	1
AGR3	ZNF626	0.976	1
ARID2	MYO16	0.976	1
ATAD5	Amp_4q13.3	0.976	1
CDKN2AIPNL	Del_11p15.5	0.976	1
CPD	ASXL1	0.976	1
DPYS	Del_11p15.5	0.976	1
HFM1	Amp_5p15.33	0.976	1
HSP90AA1	SF3B3	0.976	1
HSP90AA1	FAM47C	0.976	1
HSP90AA1	TMCO4	0.976	1
HSP90AA1	Del_Xq21.33	0.976	1
ITGA4	Amp_7p11.2	0.976	1
MED13	Del_14q24.1	0.976	1
MYO16	STK32B	0.976	1
MYO16	Amp_1p34.2	0.976	1
MYO16	Amp_6q21	0.976	1
PPARGC1A	Amp_1p34.2	0.976	1
RBM10	ASXL1	0.976	1
RBM26	Del_11p15.5	0.976	1
RBP2	Amp_17q23.3	0.976	1
RIPK4	ADC	0.976	1
SLC9A4	ADC	0.976	1
TFG	Amp_19q12	0.976	1
TXNIP	SPTAN1	0.976	1
UGP2	Del_10q23.31	0.976	1
ZNF626	ADC	0.976	1
ASXL1	Del_16q23.1	0.976	1
CNOT3	16p-Del	0.976	1
DAZAP1	3p-Amp	0.976	1
DNAH6	Amp_1p34.2	0.976	1
HLA-A	Del_9p21.3	0.976	1
17q-Amp	8q-Amp	0.976	1
17q-Amp	Amp_1q23.3	0.976	1
1q-Amp	9p-Del	0.976	1
11q-Del	Amp_3p25.2	0.976	1
22q-Del	Amp_6q21	0.976	1
6q-Del	9q-Del	0.976	1
Amp_3p25.2	Amp_12q15	0.976	1
Amp_4p16.3	Amp_5p15.33	0.976	1
Amp_4p16.3	Del_5q12.1	0.976	1
Amp_5p15.33	Amp_22q12.2	0.976	1
Amp_7p21.1	Del_7q36.3	0.976	1
Amp_8p11.21	Amp_17q12	0.976	1
Amp_8p11.21	Del_22q13.32	0.976	1
Amp_12q15	Del_12p13.1	0.976	1
ARID1A	PPARGC1A	0.977	1
ATM	SHANK1	0.977	1
BTG2	TSC1	0.977	1
C3orf70	ERBB3	0.977	1
C3orf70	STAG2	0.977	1
C3orf70	CDK12	0.977	1
CDKN2A	CNNM4	0.977	1
COPZ2	KPTN	0.977	1
COPZ2	PTTG1IP	0.977	1
EP300	DENND5B	0.977	1
EP300	TAF11	0.977	1
FGFR3	Del_11p15.5	0.977	1
FOXA1	Del_11q23.3	0.977	1
GPR50	FAT1	0.977	1
HORMAD1	IDH1	0.977	1
IDH1	ZFP36L1	0.977	1
IDH1	PSMC6	0.977	1
IDH1	CNOT3	0.977	1
IDH1	ZNF773	0.977	1
IDH1	Amp_1p34.2	0.977	1
KPTN	PTTG1IP	0.977	1
KPTN	Amp_17q12	0.977	1
NF2	POTEG	0.977	1
NF2	OR10Z1	0.977	1
PIGS	ZBTB7B	0.977	1
PIGS	ZNF773	0.977	1
POTEG	ZBTB7B	0.977	1
POTEG	STK32B	0.977	1
POTEG	Amp_6q21	0.977	1
PROS1	PSIP1	0.977	1
PROS1	RBM26	0.977	1
PSIP1	Del_11q25	0.977	1
RXRA	KDM5A	0.977	1
RXRA	18q-Del	0.977	1
SARNP	STK32B	0.977	1
SARNP	Amp_6q21	0.977	1
TBC1D12	20q-Amp	0.977	1
TBC1D12	9p-Del	0.977	1
TGIF2LX	TSC1	0.977	1
TSC1	CASP8	0.977	1
ZBTB7B	UGP2	0.977	1
ZNF180	Del_13q14.2	0.977	1
ZNF486	ARID2	0.977	1
ZNF486	PSMC6	0.977	1
ZNF486	Amp_6q21	0.977	1
CASP8	FAT1	0.977	1
CTCF	DENND5B	0.977	1
DENND5B	DPYS	0.977	1
DENND5B	FUT5	0.977	1
DLX6	7q-Amp	0.977	1
DLX6	15q-Del	0.977	1
DPYS	15q-Del	0.977	1
FAT1	HFM1	0.977	1
FAT1	IKZF2	0.977	1
FAT1	THRAP3	0.977	1
FAT1	CDH1	0.977	1
FAT1	Del_1p36.11	0.977	1
HFM1	20q-Amp	0.977	1
ITGA4	PPARGC1A	0.977	1
ITGA4	SSH3	0.977	1
ITGA4	TXNIP	0.977	1
KDM5A	Amp_20q11.21	0.977	1
NEK11	SSH3	0.977	1
NEK11	DNAH6	0.977	1
OR10Z1	PSMC6	0.977	1
OR10Z1	ZNF773	0.977	1
PPARG	7q-Amp	0.977	1
PPARGC1A	SSH3	0.977	1
PPARGC1A	Del_18q23	0.977	1
PSMC6	FUS	0.977	1
RBM26	11p-Del	0.977	1
STK32B	FUS	0.977	1
USP28	15q-Del	0.977	1
ZNF626	Amp_8p11.23	0.977	1
CUL1	Del_16p13.3	0.977	1
ZNF185	7q-Amp	0.977	1
ZNF773	Del_16q23.1	0.977	1
20p-Amp	Del_19p13.3	0.977	1
3p-Amp	Amp_8p11.23	0.977	1
3p-Amp	Del_2q37.1	0.977	1
3q-Amp	Del_3p14.2	0.977	1
5p-Amp	Amp_7p21.1	0.977	1
8q-Amp	Del_18q23	0.977	1
11p-Del	19p-Del	0.977	1
15q-Del	Del_6q27	0.977	1
18q-Del	Del_8p23.3	0.977	1
22q-Del	Amp_4p16.3	0.977	1
Amp_3p25.2	Del_2q34	0.977	1
Amp_6q21	Amp_13q22.1	0.977	1
Amp_8p11.23	Del_22q13.32	0.977	1
Amp_8p11.21	Del_17p12	0.977	1
Del_1p36.11	Del_11q23.3	0.977	1
Del_7q36.3	Del_13q14.2	0.977	1
ASXL2	HFM1	0.978	1
ASXL2	KDM5A	0.978	1
ASXL2	NCOA1	0.978	1
ASXL2	OGDH	0.978	1
ATM	IDH1	0.978	1
ATM	SARNP	0.978	1
ATM	UGP2	0.978	1
BTG2	HIST1H3B	0.978	1
BTG2	8q-Amp	0.978	1
BTG2	Del_1q32.1	0.978	1
BTG2	Del_17p12	0.978	1
BTG2	Del_Xq21.33	0.978	1
C12orf43	GNA13	0.978	1
C12orf43	TMCO4	0.978	1
C12orf43	Del_Xq21.33	0.978	1
CDKN2A	RHOB	0.978	1
CNNM4	TBC1D12	0.978	1
COPZ2	5q-Del	0.978	1
COPZ2	Del_8p23.3	0.978	1
COPZ2	Del_19p13.3	0.978	1
CREBBP	MIPOL1	0.978	1
CREBBP	STAG2	0.978	1
CREBBP	TFG	0.978	1
CTNNB1	SHANK1	0.978	1
ELF3	NDC80	0.978	1
ERBB3	ARID2	0.978	1
ERCC2	SHANK1	0.978	1
ERCC2	Del_3p14.2	0.978	1
FOXA1	RHOA	0.978	1
FOXA1	HLA-A	0.978	1
FOXQ1	NRAS	0.978	1
FOXQ1	GLTP	0.978	1
FOXQ1	ZBTB47	0.978	1
GPR50	NRAS	0.978	1
GPR50	UBA52	0.978	1
GPR50	UNC93B1	0.978	1
GPS2	TBC1D12	0.978	1
GTF2I	Amp_12q15	0.978	1
HIST1H2AG	HIST1H3B	0.978	1
HIST1H2AG	GNA13	0.978	1
HIST1H3B	NHLRC1	0.978	1
HIST1H3B	CCNE2	0.978	1
HIST1H3B	IL10RB	0.978	1
HIST1H3B	TAF11	0.978	1
HIST1H3B	Amp_1q21.3	0.978	1
HRAS	RARG	0.978	1
KPTN	5q-Del	0.978	1
KPTN	Del_8p23.3	0.978	1
KRAS	UBA52	0.978	1
KRAS	ZBTB47	0.978	1
METTL3	NFE2L3	0.978	1
METTL3	CASP8	0.978	1
METTL3	WAC	0.978	1
METTL3	BAP1	0.978	1
METTL3	CDH1	0.978	1
NFE2L3	UBA52	0.978	1
NHLRC1	TMCO4	0.978	1
NRAS	RUNX1	0.978	1
NRAS	Del_1p36.11	0.978	1
PIGS	Del_4q34.2	0.978	1
PTEN	HLA-A	0.978	1
RHOA	CDH1	0.978	1
RPTN	CUL1	0.978	1
RUNX1	UNC93B1	0.978	1
SARNP	Del_4q34.2	0.978	1
SHANK1	DCDC1	0.978	1
SHANK1	EPS8	0.978	1
SHANK1	Del_1p36.11	0.978	1
STAG2	Del_9p21.3	0.978	1
TBC1D12	NKX2-2	0.978	1
TGIF2LX	17q-Amp	0.978	1
TGIF2LX	Del_Xq21.33	0.978	1
ZFP36L2	RARG	0.978	1
ZFP36L2	Amp_4q13.3	0.978	1
ZNF180	RIPK4	0.978	1
ATAD5	ASXL1	0.978	1
CASP8	HLA-A	0.978	1
CCNE2	TMCO4	0.978	1
CCNE2	Del_Xq21.33	0.978	1
CDK12	SPTAN1	0.978	1
DCDC1	ZBTB47	0.978	1
DCDC1	UNC93B1	0.978	1
DDX3X	3p-Amp	0.978	1
DLX6	Amp_8p11.23	0.978	1
GLTP	THRAP3	0.978	1
GLTP	BAP1	0.978	1
GLTP	EPS8	0.978	1
IKZF2	UBA52	0.978	1
IL10RB	TMCO4	0.978	1
IL10RB	Del_1q32.1	0.978	1
LETMD1	TMCO4	0.978	1
LETMD1	17q-Amp	0.978	1
LETMD1	Del_1q32.1	0.978	1
LETMD1	Del_17p12	0.978	1
NAA15	CUL1	0.978	1
NCOA1	Amp_17q12	0.978	1
NEK11	Amp_3p25.2	0.978	1
NEK11	Amp_12q15	0.978	1
NEK11	Del_16q23.1	0.978	1
OR10Z1	Amp_1q21.3	0.978	1
OR10Z1	Del_4q34.2	0.978	1
PPARGC1A	Amp_3p25.2	0.978	1
PPARGC1A	Del_16q23.1	0.978	1
RIPK4	Amp_1q23.3	0.978	1
SNRPB	Del_17p12	0.978	1
SNRPB	Del_18q23	0.978	1
SSH3	Amp_12q15	0.978	1
TAF11	17q-Amp	0.978	1
TAF11	Del_Xq21.33	0.978	1
TFG	Amp_7p21.1	0.978	1
THRAP3	UBA52	0.978	1
THRAP3	UNC93B1	0.978	1
UBA52	WAC	0.978	1
UBA52	BAP1	0.978	1
UBA52	CDH1	0.978	1
USP28	Del_10q23.31	0.978	1
ZBTB47	BAP1	0.978	1
ZNF750	UNC93B1	0.978	1
BAP1	HLA-A	0.978	1
CDH1	UNC93B1	0.978	1
CUL1	19q-Amp	0.978	1
DNAH6	Del_16q23.1	0.978	1
EPS8	HLA-A	0.978	1
EPS8	UNC93B1	0.978	1
HLA-A	Del_1p36.11	0.978	1
SPTAN1	14q-Del	0.978	1
TMCO4	Amp_1q21.3	0.978	1
17q-Amp	Amp_1q21.3	0.978	1
20q-Amp	22q-Del	0.978	1
20q-Amp	Del_19p13.3	0.978	1
10q-Del	Del_17p12	0.978	1
15q-Del	Amp_19q13.43	0.978	1
19p-Del	Del_1q32.1	0.978	1
22q-Del	Del_11q23.3	0.978	1
Amp_1q21.3	Del_Xq21.33	0.978	1
Amp_4q13.3	Amp_17q23.3	0.978	1
Amp_6q21	Del_5q12.1	0.978	1
Amp_7p21.1	Del_4q22.1	0.978	1
Amp_7p11.2	Amp_10p14	0.978	1
Amp_12q15	Amp_19q13.43	0.978	1
Amp_19q13.43	Del_19p13.3	0.978	1
Amp_20q11.21	Del_2q22.1	0.978	1
Del_8p23.3	Del_12p13.1	0.978	1
ARID1A	PPP4R1	0.979	1
ARID1A	USP28	0.979	1
ASXL2	ERBB2	0.979	1
ATM	PIK3CA	0.979	1
CDKN1A	PPARG	0.979	1
COPZ2	Amp_1q23.3	0.979	1
CSMD3	DIAPH2	0.979	1
CSMD3	SF3B3	0.979	1
CSMD3	FAM47C	0.979	1
DIAPH2	HIST1H3B	0.979	1
DIAPH2	Del_1q32.1	0.979	1
FBXW7	Del_6q27	0.979	1
GTF2I	PLCXD3	0.979	1
GTF2I	AGR3	0.979	1
GTF2I	RBP2	0.979	1
HIST1H3B	TRERF1	0.979	1
HORMAD1	KLF5	0.979	1
HORMAD1	ARID1B	0.979	1
KDM6A	NAA15	0.979	1
KLF5	ZBTB7B	0.979	1
NF1	ZNF180	0.979	1
NFE2L3	Amp_8p11.21	0.979	1
NHLRC1	3q-Amp	0.979	1
NHLRC1	Del_15q13.1	0.979	1
NRAS	Del_8p23.3	0.979	1
PIK3CA	PKHD1	0.979	1
PIK3CA	Del_4q34.2	0.979	1
PLCXD3	ITGA4	0.979	1
PLCXD3	TXNIP	0.979	1
RB1	UNC93B1	0.979	1
RB1	Del_22q13.32	0.979	1
RUNX1	3q-Amp	0.979	1
RUNX1	Del_15q13.1	0.979	1
RXRA	17p-Del	0.979	1
SARNP	Amp_6p22.3	0.979	1
SHANK1	Amp_22q12.2	0.979	1
TGIF2LX	Del_15q13.1	0.979	1
ZBTB7B	PARD3	0.979	1
ZBTB7B	Del_13q14.2	0.979	1
ZFP36L1	20q-Amp	0.979	1
ZNF511	Del_3p14.2	0.979	1
AGR3	NEK11	0.979	1
AGR3	PPARGC1A	0.979	1
CCNE2	10q-Del	0.979	1
CCNE2	Del_15q13.1	0.979	1
CDK12	Del_11p15.5	0.979	1
CPD	TMCO4	0.979	1
CPD	Del_Xq21.33	0.979	1
CTCF	Amp_8q22.3	0.979	1
DCDC1	Amp_8p11.21	0.979	1
DCDC1	Del_15q13.1	0.979	1
GLTP	Del_8p23.3	0.979	1
IL10RB	3q-Amp	0.979	1
IL10RB	Del_15q13.1	0.979	1
MARK2	Del_19p13.3	0.979	1
MBD1	Amp_5p15.33	0.979	1
PARD3	Del_13q14.2	0.979	1
PPARGC1A	DAZAP1	0.979	1
PPP4R1	Del_4q34.2	0.979	1
PSMC6	7p-Amp	0.979	1
RBM10	3q-Amp	0.979	1
RBP2	Amp_7p11.2	0.979	1
SF3B3	Del_1q32.1	0.979	1
SNRPB	3q-Amp	0.979	1
SNRPB	6q-Del	0.979	1
STK32B	4q-Del	0.979	1
STK32B	Del_13q14.2	0.979	1
TAF11	3q-Amp	0.979	1
TAF11	Del_15q13.1	0.979	1
TRERF1	TMCO4	0.979	1
TRERF1	10q-Del	0.979	1
USP28	5q-Del	0.979	1
WAC	10q-Del	0.979	1
ADC	DNAH6	0.979	1
ADC	SPTAN1	0.979	1
ARID1B	ZNF773	0.979	1
ARID1B	Amp_6q21	0.979	1
ASXL1	Amp_6p22.3	0.979	1
CDH1	6q-Del	0.979	1
CDH1	Del_15q13.1	0.979	1
CNOT1	SPTAN1	0.979	1
CNOT1	6q-Del	0.979	1
CNOT3	7p-Amp	0.979	1
DAZAP1	DNAH6	0.979	1
SCARF2	6q-Del	0.979	1
SCARF2	Del_15q13.1	0.979	1
UNC93B1	Del_4q22.1	0.979	1
19q-Amp	5p-Amp	0.979	1
1q-Amp	Del_2q22.1	0.979	1
20p-Amp	Del_12p13.1	0.979	1
7p-Amp	Amp_3p25.2	0.979	1
8q-Amp	Amp_3q26.33	0.979	1
11p-Del	Amp_12q15	0.979	1
15q-Del	Del_18q23	0.979	1
17p-Del	Del_6p25.3	0.979	1
4p-Del	Del_10q23.31	0.979	1
8p-Del	Amp_3q26.33	0.979	1
9p-Del	Amp_1q23.3	0.979	1
Amp_1q21.3	Amp_4q13.3	0.979	1
Amp_3q26.33	Amp_5p15.33	0.979	1
Amp_7p21.1	Amp_16p13.2	0.979	1
Amp_7p21.1	Del_16q23.1	0.979	1
Amp_8q22.3	Del_18q23	0.979	1
Amp_10p14	Del_8p21.3	0.979	1
Del_1p36.11	Del_15q13.1	0.979	1
Del_4q22.1	Del_14q24.1	0.979	1
Del_11p15.5	Del_13q14.2	0.979	1
Del_12p13.1	Del_22q13.32	0.979	1
CDKN1A	NCOA1	0.98	1
CDKN1A	OGDH	0.98	1
CDKN1A	Amp_4p16.3	0.98	1
CDKN2A	ACTB	0.98	1
CDKN2A	CUL1	0.98	1
CFHR4	KDM5A	0.98	1
ELF3	PSIP1	0.98	1
ERBB3	PSMC6	0.98	1
ERCC2	Amp_8q22.3	0.98	1
GTF2I	Del_22q13.32	0.98	1
HIST1H3B	Amp_20q11.21	0.98	1
IDH1	Amp_20q11.21	0.98	1
KDM6A	Del_15q13.1	0.98	1
METTL3	Del_2q34	0.98	1
NF1	Amp_19q12	0.98	1
PIGS	Amp_20q11.21	0.98	1
PIK3CA	MYO16	0.98	1
PIK3CA	Del_9p23	0.98	1
POTEG	Del_2q34	0.98	1
PROS1	HFM1	0.98	1
RHOB	ZFP36L2	0.98	1
RHOB	3p-Amp	0.98	1
RXRA	Del_2q37.1	0.98	1
SARNP	Amp_20q11.21	0.98	1
SARNP	Del_2q34	0.98	1
SF3B1	CDKN2AIPNL	0.98	1
ZFP36L1	ARID1B	0.98	1
CPD	RBM10	0.98	1
CPD	TRERF1	0.98	1
CTCF	NCOA1	0.98	1
CTCF	Del_2q37.1	0.98	1
DENND5B	HSP90AA1	0.98	1
DENND5B	Amp_8q22.3	0.98	1
DPYS	NCOA1	0.98	1
HFM1	PPP4R1	0.98	1
HFM1	USP28	0.98	1
KDM5A	USP28	0.98	1
KDM5A	Del_19p13.3	0.98	1
KDM5A	Del_Xp11.3	0.98	1
MARK2	Amp_4p16.3	0.98	1
MBD1	OGDH	0.98	1
MBD1	Amp_4p16.3	0.98	1
NCOA1	FUT5	0.98	1
NCOA1	ZNF185	0.98	1
NKX2-2	Amp_22q12.2	0.98	1
SF3B3	TRERF1	0.98	1
SF3B3	CNOT1	0.98	1
SF3B3	FAM47C	0.98	1
ASXL1	7q-Amp	0.98	1
OGDH	ZNF185	0.98	1
SPTAN1	18q-Del	0.98	1
TMCO4	Amp_20q11.21	0.98	1
20q-Amp	Amp_17q23.3	0.98	1
8q-Amp	Amp_6p22.3	0.98	1
11q-Del	Del_2q22.1	0.98	1
Amp_3p25.2	Del_11p15.5	0.98	1
Amp_4p16.3	Del_Xp11.3	0.98	1
Amp_5p15.33	Amp_7p21.1	0.98	1
Amp_8q22.3	Del_3p14.2	0.98	1
Del_2q22.1	Del_11q25	0.98	1
ASXL2	GLTP	0.981	1
ATM	CDK12	0.981	1
ATM	DLX6	0.981	1
ATM	FUT5	0.981	1
BTG2	ATAD5	0.981	1
C12orf43	PKHD1	0.981	1
CDKN1A	TSC1	0.981	1
CFHR4	UBA52	0.981	1
CNNM4	SARNP	0.981	1
CNNM4	ZNF486	0.981	1
CNNM4	UGP2	0.981	1
CNNM4	FUS	0.981	1
ELF3	PKHD1	0.981	1
ELF3	9p-Del	0.981	1
ERBB2	NFE2L3	0.981	1
ERBB2	RUNX1	0.981	1
ERBB2	CDH1	0.981	1
ERBB2	EPS8	0.981	1
ERBB2	Amp_3q26.33	0.981	1
FBXW7	TGIF2LX	0.981	1
FOXA1	Amp_10p14	0.981	1
GPS2	OR10Z1	0.981	1
GPS2	FUS	0.981	1
GPS2	9p-Del	0.981	1
GTF2I	ZNF180	0.981	1
HIST1H2AG	MED13	0.981	1
HIST1H2AG	Amp_16p13.2	0.981	1
HORMAD1	HSP90AA1	0.981	1
IDH1	MIPOL1	0.981	1
IDH1	TFG	0.981	1
KDM6A	ARID2	0.981	1
KDM6A	Amp_1p34.2	0.981	1
MIPOL1	PIGS	0.981	1
MIPOL1	SARNP	0.981	1
MIPOL1	UGP2	0.981	1
NF1	ASXL1	0.981	1
NF2	ASXL1	0.981	1
NRAS	PPP4R1	0.981	1
PKHD1	ARID2	0.981	1
PKHD1	SNRPB	0.981	1
PKHD1	TAF11	0.981	1
PLCXD3	RPTN	0.981	1
PLCXD3	DDX3X	0.981	1
PLCXD3	Del_16q23.1	0.981	1
PROS1	UBA52	0.981	1
PSIP1	Del_1q32.1	0.981	1
RPTN	ADC	0.981	1
RXRA	8q-Amp	0.981	1
RXRA	Del_18q23	0.981	1
SF1	ZNF486	0.981	1
SF1	UGP2	0.981	1
STAG2	SF3B3	0.981	1
TBC1D12	Del_8p23.3	0.981	1
TGIF2LX	ATAD5	0.981	1
TGIF2LX	MED13	0.981	1
ZFP36L1	ZNF180	0.981	1
ZFP36L1	NAA15	0.981	1
ZFP36L1	Amp_4q13.3	0.981	1
ZNF180	ITGA4	0.981	1
ZNF180	RBP2	0.981	1
ZNF180	DAZAP1	0.981	1
ZNF486	ZNF511	0.981	1
ZNF486	TFG	0.981	1
AGR3	DDX3X	0.981	1
AGR3	19q-Amp	0.981	1
ATAD5	IL10RB	0.981	1
ATAD5	TAF11	0.981	1
ATAD5	SCARF2	0.981	1
CDK12	UGP2	0.981	1
CDK12	FUS	0.981	1
CTCF	GLTP	0.981	1
CTCF	UBA52	0.981	1
DDX3X	ITGA4	0.981	1
DDX3X	RBP2	0.981	1
DENND5B	17q-Amp	0.981	1
DENND5B	Del_1q32.1	0.981	1
DPYS	ZBTB47	0.981	1
DPYS	UNC93B1	0.981	1
GLTP	PPARG	0.981	1
GLTP	PPP4R1	0.981	1
HSP90AA1	STK32B	0.981	1
HSP90AA1	Del_4q34.2	0.981	1
IL10RB	Amp_16p13.2	0.981	1
MBD1	UBA52	0.981	1
MED13	Del_5q12.1	0.981	1
NEK11	RARG	0.981	1
NEK11	Del_7q36.3	0.981	1
NKX2-2	UGP2	0.981	1
NKX2-2	FUS	0.981	1
OR10Z1	14q-Del	0.981	1
PPARG	UBA52	0.981	1
PPARGC1A	Amp_4q13.3	0.981	1
PPARGC1A	Del_7q36.3	0.981	1
PPP4R1	HLA-A	0.981	1
PPP4R1	UNC93B1	0.981	1
PSMC6	5p-Amp	0.981	1
RARG	SSH3	0.981	1
RARG	DAZAP1	0.981	1
RARG	DNAH6	0.981	1
SLC9A4	Del_14q24.1	0.981	1
TAF11	Amp_16p13.2	0.981	1
TFG	UGP2	0.981	1
USP28	HLA-A	0.981	1
ADC	Amp_1q21.3	0.981	1
ADC	Amp_12q15	0.981	1
ASXL1	CNOT3	0.981	1
ASXL1	ZNF773	0.981	1
ASXL1	8p-Del	0.981	1
CNOT1	Del_6p25.3	0.981	1
DAZAP1	Amp_4q13.3	0.981	1
DAZAP1	Del_7q36.3	0.981	1
DNAH6	Amp_4q13.3	0.981	1
EPS8	Amp_19q12	0.981	1
FAM47C	Del_16p13.3	0.981	1
TMCO4	15q-Del	0.981	1
UNC93B1	Del_Xp11.3	0.981	1
20p-Amp	Amp_1q23.3	0.981	1
3p-Amp	Del_9p23	0.981	1
10q-Del	Amp_1q21.3	0.981	1
16p-Del	Del_18q23	0.981	1
18q-Del	Del_2q34	0.981	1
6q-Del	Amp_1q21.3	0.981	1
Amp_3p25.2	Amp_10p14	0.981	1
Amp_8q22.3	Amp_11q13.3	0.981	1
Amp_11q22.2	Del_18q23	0.981	1
Amp_12q15	Del_8p21.3	0.981	1
Amp_17q12	Amp_22q12.2	0.981	1
Del_2q34	Del_14q24.1	0.981	1
BTG2	CNOT3	0.982	1
BTG2	ZNF773	0.982	1
C3orf70	KRAS	0.982	1
C3orf70	NFE2L3	0.982	1
C3orf70	CDH1	0.982	1
CNNM4	SF3B1	0.982	1
CNNM4	MYO16	0.982	1
CNNM4	16p-Del	0.982	1
CNNM4	22q-Del	0.982	1
COPZ2	6q-Del	0.982	1
COPZ2	Del_15q13.1	0.982	1
CSMD3	HIST1H2AG	0.982	1
CSMD3	PPARGC1A	0.982	1
CSMD3	TXNIP	0.982	1
CTNNB1	HRAS	0.982	1
CTNNB1	ZNF626	0.982	1
ERBB3	GTF2I	0.982	1
ERBB3	DNAH6	0.982	1
FBXW7	PTEN	0.982	1
FBXW7	RUNX1	0.982	1
FBXW7	IKZF2	0.982	1
FBXW7	CDH1	0.982	1
FGFR3	PIK3CA	0.982	1
FGFR3	TMCO4	0.982	1
FOXA1	HRAS	0.982	1
FOXA1	ZFP36L2	0.982	1
FOXQ1	8p-Del	0.982	1
GPR50	SLC9A4	0.982	1
GPR50	ZNF626	0.982	1
GPS2	22q-Del	0.982	1
GTF2I	CDK12	0.982	1
HIST1H2AG	HORMAD1	0.982	1
HIST1H2AG	NF2	0.982	1
HIST1H2AG	ZNF773	0.982	1
HIST1H3B	STAG2	0.982	1
HORMAD1	IL10RB	0.982	1
HORMAD1	TAF11	0.982	1
HRAS	ZNF750	0.982	1
KDM6A	DLX6	0.982	1
KPTN	3q-Amp	0.982	1
KRAS	SLC9A4	0.982	1
NF2	NHLRC1	0.982	1
NFE2L2	Del_4q22.1	0.982	1
NHLRC1	PSMC6	0.982	1
NHLRC1	Amp_6q21	0.982	1
NRAS	5q-Del	0.982	1
PIK3CA	STAG2	0.982	1
PIK3CA	CDK12	0.982	1
PKHD1	SF3B3	0.982	1
POTEG	Del_11q23.3	0.982	1
PROS1	Del_2q34	0.982	1
PTEN	3p-Amp	0.982	1
RHOA	20q-Amp	0.982	1
RXRA	SF1	0.982	1
RXRA	CDK12	0.982	1
SF1	16p-Del	0.982	1
SF1	Amp_11q22.2	0.982	1
SHANK1	ZNF185	0.982	1
TGIF2LX	STK32B	0.982	1
TGIF2LX	ZNF773	0.982	1
TP53	ZNF486	0.982	1
TP53	OR10Z1	0.982	1
TP53	Del_3p14.2	0.982	1
ZBTB7B	CCNE2	0.982	1
ZBTB7B	IL10RB	0.982	1
ZBTB7B	PHLDA3	0.982	1
ZBTB7B	TAF11	0.982	1
ZFP36L2	BAP1	0.982	1
ZNF180	Amp_7p11.2	0.982	1
ACTB	CASP8	0.982	1
ACTB	ZNF750	0.982	1
ATAD5	CASP8	0.982	1
ATAD5	DCDC1	0.982	1
ATAD5	WAC	0.982	1
ATAD5	CDH1	0.982	1
ATAD5	CNOT1	0.982	1
ATAD5	FAM47C	0.982	1
CASP8	RIPK4	0.982	1
CCNE2	CNOT3	0.982	1
CDK12	MYO16	0.982	1
CDK12	PPARGC1A	0.982	1
CDK12	SSH3	0.982	1
CDKN2AIPNL	PARD3	0.982	1
CDKN2AIPNL	4q-Del	0.982	1
CPD	MED13	0.982	1
DCDC1	CUL1	0.982	1
DDX3X	SPTAN1	0.982	1
EXOSC10	Amp_16p13.2	0.982	1
FAT1	OR10Z1	0.982	1
FAT1	ARID1B	0.982	1
IKZF2	RIPK4	0.982	1
IL10RB	Amp_6q21	0.982	1
ITGA4	14q-Del	0.982	1
ITGA4	4p-Del	0.982	1
LETMD1	STK32B	0.982	1
MED13	RBM10	0.982	1
MED13	WAC	0.982	1
MED13	EPS8	0.982	1
MYO16	TFG	0.982	1
NAA15	Amp_20q11.21	0.982	1
OR10Z1	20q-Amp	0.982	1
PSMC6	SNRPB	0.982	1
PSMC6	SCARF2	0.982	1
RBM10	Amp_16p13.2	0.982	1
RIPK4	BAP1	0.982	1
SLC9A4	WAC	0.982	1
SLC9A4	CDH1	0.982	1
SLC9A4	EPS8	0.982	1
TAF11	CNOT3	0.982	1
UGP2	Del_8p23.3	0.982	1
ZNF750	CUL1	0.982	1
ADC	20p-Amp	0.982	1
CNOT3	SCARF2	0.982	1
CNOT3	19p-Del	0.982	1
FAM47C	Amp_16p13.2	0.982	1
SPTAN1	Del_15q13.1	0.982	1
UNC93B1	Del_19p13.3	0.982	1
1q-Amp	Amp_16p13.2	0.982	1
20p-Amp	Amp_11q13.3	0.982	1
20p-Amp	Del_10q23.31	0.982	1
8q-Amp	Amp_5p15.33	0.982	1
8q-Amp	Amp_20q11.21	0.982	1
8q-Amp	Del_16q23.1	0.982	1
10q-Del	Del_4q34.2	0.982	1
14q-Del	16p-Del	0.982	1
16p-Del	Del_4q22.1	0.982	1
5q-Del	Amp_8q22.3	0.982	1
9q-Del	Amp_11q13.3	0.982	1
Amp_1q21.3	Amp_7p21.1	0.982	1
Amp_1q21.3	Del_6q27	0.982	1
Amp_1q23.3	Del_18q23	0.982	1
Amp_3q26.33	Del_22q13.32	0.982	1
Amp_6p22.3	Amp_17q12	0.982	1
Amp_7p11.2	Amp_20q11.21	0.982	1
Amp_8p11.23	Amp_20q11.21	0.982	1
Amp_8p11.23	Del_3p14.2	0.982	1
Amp_8q22.3	Del_5q12.1	0.982	1
Amp_8q22.3	Del_16q23.1	0.982	1
Amp_10p14	Amp_13q22.1	0.982	1
Amp_13q22.1	Del_4q34.2	0.982	1
Amp_19q12	Del_17p12	0.982	1
Amp_22q12.2	Del_3p14.2	0.982	1
Del_3p14.2	Del_16q23.1	0.982	1
ARID1A	SF3B1	0.983	1
ARID1A	Amp_6p22.3	0.983	1
ATM	C3orf70	0.983	1
ATM	ZNF626	0.983	1
C12orf43	STAG2	0.983	1
CDKN2A	PIGS	0.983	1
CDKN2A	SARNP	0.983	1
CDKN2A	OR10Z1	0.983	1
CDKN2A	FUS	0.983	1
CFHR4	METTL3	0.983	1
CNNM4	Amp_5p15.33	0.983	1
COPZ2	ATAD5	0.983	1
CREBBP	EXOSC10	0.983	1
CTNNB1	Amp_7p21.1	0.983	1
DIAPH2	NF2	0.983	1
DIAPH2	Amp_6q21	0.983	1
EP300	TBC1D12	0.983	1
EP300	KDM5A	0.983	1
EP300	CNOT3	0.983	1
EP300	Del_4q22.1	0.983	1
ERBB3	PIK3CA	0.983	1
ERBB3	AGR3	0.983	1
HIST1H2AG	NF1	0.983	1
HIST1H3B	NRAS	0.983	1
HIST1H3B	UBA52	0.983	1
HIST1H3B	ZBTB47	0.983	1
HIST1H3B	HLA-A	0.983	1
HORMAD1	CPD	0.983	1
KRAS	TBC1D12	0.983	1
METTL3	CTCF	0.983	1
METTL3	DPYS	0.983	1
METTL3	USP28	0.983	1
NF1	NHLRC1	0.983	1
NF1	STAG2	0.983	1
NF1	TGIF2LX	0.983	1
NF1	LETMD1	0.983	1
NF1	Del_6q27	0.983	1
NFE2L3	Del_6q27	0.983	1
PIK3CA	ACTB	0.983	1
PIK3CA	RIPK4	0.983	1
PIK3CA	ZNF773	0.983	1
POTEG	Amp_8p11.21	0.983	1
PSIP1	SF3B3	0.983	1
SHANK1	CTCF	0.983	1
SHANK1	MBD1	0.983	1
SHANK1	PPP4R1	0.983	1
SHANK1	USP28	0.983	1
TBC1D12	KDM5A	0.983	1
TBC1D12	Amp_4p16.3	0.983	1
ZNF486	Amp_8p11.21	0.983	1
CDKN2AIPNL	ASXL1	0.983	1
CPD	PSMC6	0.983	1
CPD	ZNF773	0.983	1
EPHA2	Del_11p15.5	0.983	1
GLTP	TMCO4	0.983	1
GLTP	8p-Del	0.983	1
GLTP	Del_1q32.1	0.983	1
HFM1	ASXL1	0.983	1
HSP90AA1	NCOA1	0.983	1
HSP90AA1	Amp_4p16.3	0.983	1
IKZF2	Del_11q25	0.983	1
OR10Z1	Amp_8p11.21	0.983	1
PPARGC1A	Del_16p13.3	0.983	1
PSMC6	CNOT1	0.983	1
RBM10	20p-Amp	0.983	1
RBM26	TRERF1	0.983	1
STK32B	CNOT1	0.983	1
STK32B	Del_14q24.1	0.983	1
TRERF1	ZNF773	0.983	1
WAC	Del_6q27	0.983	1
ZBTB47	GNA13	0.983	1
BAP1	Amp_7p21.1	0.983	1
CDH1	Del_6q27	0.983	1
FAM47C	7q-Amp	0.983	1
GNA13	UNC93B1	0.983	1
SPTAN1	9q-Del	0.983	1
TMCO4	Amp_17q12	0.983	1
1q-Amp	Del_11q25	0.983	1
20q-Amp	9p-Del	0.983	1
3p-Amp	Amp_22q12.2	0.983	1
11p-Del	Del_22q13.32	0.983	1
19p-Del	Del_16p13.3	0.983	1
Amp_4p16.3	Del_11q25	0.983	1
Amp_6q21	Del_14q24.1	0.983	1
Amp_17q12	Del_1q32.1	0.983	1
Amp_17q23.3	Del_11p15.5	0.983	1
Amp_19q12	Del_19p13.3	0.983	1
Amp_22q12.2	Del_19p13.3	0.983	1
Del_2q34	Del_11q23.3	0.983	1
ARID1A	METTL3	0.984	1
ARID1A	CPD	0.984	1
ASXL2	PKHD1	0.984	1
ATM	ERBB2	0.984	1
C12orf43	Amp_1p34.2	0.984	1
C3orf70	FUT5	0.984	1
CDKN2A	Del_10q23.31	0.984	1
CNNM4	Amp_12q15	0.984	1
CNNM4	Del_16q23.1	0.984	1
COPZ2	NF1	0.984	1
CTNNB1	RBP2	0.984	1
CTNNB1	Amp_17q23.3	0.984	1
ELF3	NCOA1	0.984	1
ELF3	1q-Amp	0.984	1
EP300	ARID1B	0.984	1
ERBB2	IDH1	0.984	1
FOXQ1	PLCXD3	0.984	1
FOXQ1	Del_3p14.2	0.984	1
GPR50	PLCXD3	0.984	1
GPR50	AGR3	0.984	1
GPR50	DAZAP1	0.984	1
GPS2	ARID1B	0.984	1
GPS2	7p-Amp	0.984	1
GPS2	Del_9p21.3	0.984	1
HIST1H2AG	ARID2	0.984	1
HIST1H3B	NCOA1	0.984	1
IDH1	PIGS	0.984	1
IDH1	SARNP	0.984	1
IDH1	FUS	0.984	1
IDH1	Amp_1q23.3	0.984	1
KLF5	NKX2-2	0.984	1
KLF5	TFG	0.984	1
KRAS	AGR3	0.984	1
NF1	NFE2L3	0.984	1
NF1	PTEN	0.984	1
NF1	CASP8	0.984	1
NF1	CPD	0.984	1
NF1	SF3B3	0.984	1
NF1	CNOT1	0.984	1
NFE2L3	PLCXD3	0.984	1
NFE2L3	DAZAP1	0.984	1
NFE2L3	Del_3p14.2	0.984	1
NHLRC1	ZFP36L1	0.984	1
NRAS	Amp_19q13.43	0.984	1
PIGS	SARNP	0.984	1
PIK3CA	Del_4q22.1	0.984	1
PLCXD3	EXOSC10	0.984	1
PLCXD3	ZNF750	0.984	1
POTEG	SARNP	0.984	1
POTEG	FUS	0.984	1
PROS1	Del_15q13.1	0.984	1
RB1	MBD1	0.984	1
RHOB	NEK11	0.984	1
RHOB	Amp_11q13.3	0.984	1
RPTN	NAA15	0.984	1
RPTN	Amp_4q13.3	0.984	1
RPTN	Del_16q23.1	0.984	1
RUNX1	RBP2	0.984	1
SARNP	UGP2	0.984	1
SARNP	Amp_1q23.3	0.984	1
SHANK1	ARID1B	0.984	1
TGIF2LX	ARID2	0.984	1
ZFP36L1	LETMD1	0.984	1
ZFP36L1	SCARF2	0.984	1
ZFP36L1	19p-Del	0.984	1
ZFP36L1	Amp_19q12	0.984	1
ZFP36L2	DLX6	0.984	1
ZNF180	DDX3X	0.984	1
ZNF180	RARG	0.984	1
ZNF486	UGP2	0.984	1
ZNF511	7p-Amp	0.984	1
AGR3	WAC	0.984	1
AGR3	ZNF750	0.984	1
AGR3	BAP1	0.984	1
AGR3	CDH1	0.984	1
AGR3	1q-Amp	0.984	1
ARID2	IL10RB	0.984	1
ARID2	SNRPB	0.984	1
ARID2	Amp_19q12	0.984	1
ATAD5	Amp_17q12	0.984	1
CASP8	DAZAP1	0.984	1
CDK12	Del_2q37.1	0.984	1
CDKN2AIPNL	8p-Del	0.984	1
DCDC1	RBP2	0.984	1
DCDC1	ADC	0.984	1
DLX6	ZNF626	0.984	1
DLX6	CUL1	0.984	1
DPYS	Del_15q13.1	0.984	1
EPHA2	GNA13	0.984	1
EPHA2	8q-Amp	0.984	1
EPHA2	Del_3p14.2	0.984	1
EPHA2	Del_18q23	0.984	1
HSP90AA1	Del_13q14.2	0.984	1
IKZF2	ADC	0.984	1
IKZF2	DAZAP1	0.984	1
KDM5A	GNA13	0.984	1
KDM5A	Del_1q32.1	0.984	1
LETMD1	Amp_1p34.2	0.984	1
NCOA1	Del_1q32.1	0.984	1
NCOA1	Del_Xq21.33	0.984	1
NDC80	Amp_13q22.1	0.984	1
NEK11	Del_2q37.1	0.984	1
NEK11	Del_8p23.3	0.984	1
NKX2-2	7p-Amp	0.984	1
NKX2-2	Del_16q23.1	0.984	1
PARD3	TFG	0.984	1
PPARGC1A	Del_2q37.1	0.984	1
PPP4R1	3q-Amp	0.984	1
RBM10	Amp_5p15.33	0.984	1
RBP2	CDH1	0.984	1
SLC9A4	FUT5	0.984	1
SSH3	Del_2q37.1	0.984	1
TFG	ARID1B	0.984	1
TFG	Amp_10p14	0.984	1
TFG	Del_6p25.3	0.984	1
TFG	Del_16q23.1	0.984	1
USP28	6q-Del	0.984	1
WAC	Amp_17q23.3	0.984	1
ADC	BAP1	0.984	1
ADC	CDH1	0.984	1
ADC	1q-Amp	0.984	1
CDH1	DAZAP1	0.984	1
DAZAP1	EPS8	0.984	1
FUT5	20q-Amp	0.984	1
OGDH	Del_Xq21.33	0.984	1
TMCO4	11q-Del	0.984	1
19q-Amp	Amp_13q22.1	0.984	1
19q-Amp	Del_7q36.3	0.984	1
19q-Amp	Del_18q23	0.984	1
20q-Amp	Del_14q24.1	0.984	1
3q-Amp	11q-Del	0.984	1
3q-Amp	17p-Del	0.984	1
8q-Amp	Del_8p21.3	0.984	1
10q-Del	14q-Del	0.984	1
11q-Del	Del_15q13.1	0.984	1
11q-Del	Del_16p13.3	0.984	1
11q-Del	Del_Xq21.33	0.984	1
4p-Del	Del_15q13.1	0.984	1
6q-Del	Amp_8q22.3	0.984	1
Amp_4q13.3	Del_7q36.3	0.984	1
Amp_6p22.3	Amp_13q22.1	0.984	1
Amp_10p14	Del_6q27	0.984	1
Amp_11q13.3	Del_11p15.5	0.984	1
Amp_11q22.2	Del_11q25	0.984	1
Amp_17q12	Amp_20q11.21	0.984	1
Del_2q37.1	Del_19p13.3	0.984	1
Del_11q23.3	Del_14q24.1	0.984	1
ARID1A	KPTN	0.985	1
ATM	Amp_1q23.3	0.985	1
BTG2	CNNM4	0.985	1
BTG2	GPS2	0.985	1
BTG2	MIPOL1	0.985	1
BTG2	SF1	0.985	1
BTG2	NKX2-2	0.985	1
BTG2	Del_10q23.31	0.985	1
C12orf43	MIPOL1	0.985	1
C12orf43	ZNF511	0.985	1
C3orf70	CFHR4	0.985	1
CDKN1A	Del_11q25	0.985	1
CDKN2A	Del_4q34.2	0.985	1
CNNM4	IL10RB	0.985	1
CNNM4	LETMD1	0.985	1
CNNM4	SCARF2	0.985	1
COPZ2	ZFP36L1	0.985	1
CREBBP	OR10Z1	0.985	1
CTNNB1	PPARGC1A	0.985	1
ERBB3	CDK12	0.985	1
ERBB3	RBM10	0.985	1
ERBB3	Del_10q23.31	0.985	1
ERCC2	HORMAD1	0.985	1
ERCC2	ZBTB7B	0.985	1
ERCC2	ZFP36L1	0.985	1
ERCC2	ARID2	0.985	1
ERCC2	CNOT3	0.985	1
ERCC2	ZNF773	0.985	1
ERCC2	Amp_1p34.2	0.985	1
ERCC2	Amp_6q21	0.985	1
FBXW7	RBM26	0.985	1
GPS2	NHLRC1	0.985	1
GPS2	PHLDA3	0.985	1
GPS2	TAF11	0.985	1
GPS2	Del_17p12	0.985	1
GTF2I	NFE2L3	0.985	1
GTF2I	CASP8	0.985	1
GTF2I	IKZF2	0.985	1
GTF2I	ZNF185	0.985	1
HRAS	CTCF	0.985	1
KDM6A	NRAS	0.985	1
KDM6A	UNC93B1	0.985	1
KPTN	ZFP36L1	0.985	1
KPTN	ARID2	0.985	1
KPTN	Amp_1p34.2	0.985	1
KRAS	PPARGC1A	0.985	1
MIPOL1	CCNE2	0.985	1
MIPOL1	SNRPB	0.985	1
NFE2L3	PPARGC1A	0.985	1
NFE2L3	TXNIP	0.985	1
NHLRC1	NKX2-2	0.985	1
NHLRC1	Amp_3q26.33	0.985	1
PIK3CA	LETMD1	0.985	1
PLCXD3	TP53	0.985	1
POTEG	Del_11q25	0.985	1
PSIP1	ATAD5	0.985	1
PTTG1IP	Amp_1p34.2	0.985	1
RB1	Amp_1q21.3	0.985	1
RHOB	RXRA	0.985	1
RHOB	Amp_13q22.1	0.985	1
RHOB	Del_4q34.2	0.985	1
RPTN	Amp_3p25.2	0.985	1
RUNX1	SSH3	0.985	1
RXRA	SLC9A4	0.985	1
SARNP	Del_6q27	0.985	1
SF1	LETMD1	0.985	1
SF3B1	ZFP36L2	0.985	1
SHANK1	Del_8p21.3	0.985	1
TBC1D12	UGP2	0.985	1
TGIF2LX	TFG	0.985	1
TP53	DAZAP1	0.985	1
TSC1	UBA52	0.985	1
TSC1	HLA-A	0.985	1
ZFP36L2	USP28	0.985	1
ZNF511	LETMD1	0.985	1
ZNF511	TAF11	0.985	1
ZNF511	SCARF2	0.985	1
AGR3	Del_14q24.1	0.985	1
CASP8	ITGA4	0.985	1
CASP8	NEK11	0.985	1
CCNE2	NKX2-2	0.985	1
CCNE2	Del_10q23.31	0.985	1
CDK12	Del_2q34	0.985	1
CDKN2AIPNL	TRERF1	0.985	1
CTCF	ZNF626	0.985	1
CTCF	CUL1	0.985	1
DCDC1	ITGA4	0.985	1
DCDC1	TXNIP	0.985	1
DCDC1	DNAH6	0.985	1
DLX6	NEK11	0.985	1
DLX6	TXNIP	0.985	1
DPYS	Amp_8p11.21	0.985	1
FAT1	Amp_1q21.3	0.985	1
IKZF2	TXNIP	0.985	1
IL10RB	Amp_11q13.3	0.985	1
ITGA4	ZNF750	0.985	1
ITGA4	CDH1	0.985	1
ITGA4	FUT5	0.985	1
LETMD1	TFG	0.985	1
MBD1	Amp_8p11.21	0.985	1
MYO16	RIPK4	0.985	1
MYO16	SLC9A4	0.985	1
NEK11	THRAP3	0.985	1
NEK11	WAC	0.985	1
NEK11	CDH1	0.985	1
NEK11	EPS8	0.985	1
NKX2-2	PHLDA3	0.985	1
NKX2-2	SNRPB	0.985	1
OR10Z1	Amp_7p21.1	0.985	1
OR10Z1	Del_6q27	0.985	1
PPARG	3p-Amp	0.985	1
PPARGC1A	THRAP3	0.985	1
PPARGC1A	CDH1	0.985	1
PPARGC1A	EPS8	0.985	1
PPARGC1A	Del_1p36.11	0.985	1
PPP4R1	SLC9A4	0.985	1
RBM26	Amp_13q22.1	0.985	1
SNRPB	Amp_3q26.33	0.985	1
SSH3	CDH1	0.985	1
SSH3	FUT5	0.985	1
SSH3	ZNF185	0.985	1
THRAP3	Del_13q14.2	0.985	1
UGP2	Del_6q27	0.985	1
USP28	CUL1	0.985	1
ADC	Del_14q24.1	0.985	1
CUL1	22q-Del	0.985	1
DAZAP1	Del_14q24.1	0.985	1
TMCO4	Del_10q23.31	0.985	1
3p-Amp	Del_9p21.3	0.985	1
7q-Amp	Del_16q23.1	0.985	1
8q-Amp	Amp_7p21.1	0.985	1
11q-Del	Del_6q27	0.985	1
14q-Del	Del_2q34	0.985	1
19p-Del	Amp_3q26.33	0.985	1
6q-Del	Amp_13q22.1	0.985	1
9q-Del	Del_4q34.2	0.985	1
9q-Del	Del_14q24.1	0.985	1
Amp_3p25.2	Del_12p13.1	0.985	1
Amp_5p15.33	Amp_8p11.23	0.985	1
Amp_8p11.21	Del_Xp11.3	0.985	1
Del_2q34	Del_12p13.1	0.985	1
Del_11q25	Del_19p13.3	0.985	1
Del_12p13.1	Del_14q24.1	0.985	1
ATM	C12orf43	0.986	1
ATM	CCNE2	0.986	1
ATM	IL10RB	0.986	1
ATM	Del_Xq21.33	0.986	1
CFHR4	FBXW7	0.986	1
CFHR4	ATAD5	0.986	1
CFHR4	MED13	0.986	1
CFHR4	ADC	0.986	1
DIAPH2	Amp_1p34.2	0.986	1
ERBB2	PARD3	0.986	1
ERBB2	ZNF185	0.986	1
ERBB3	GPS2	0.986	1
FBXW7	PROS1	0.986	1
FBXW7	MBD1	0.986	1
FGFR3	PSIP1	0.986	1
GPS2	ASXL1	0.986	1
GPS2	9q-Del	0.986	1
GPS2	Del_12p13.1	0.986	1
HORMAD1	HLA-A	0.986	1
HORMAD1	7q-Amp	0.986	1
MIPOL1	HSP90AA1	0.986	1
NF2	PSIP1	0.986	1
NF2	DENND5B	0.986	1
NF2	UBA52	0.986	1
NF2	UNC93B1	0.986	1
NFE2L2	Del_3p14.2	0.986	1
NFE2L3	Amp_1p34.2	0.986	1
NRAS	Amp_6q21	0.986	1
NRAS	Del_15q13.1	0.986	1
PKHD1	MBD1	0.986	1
PKHD1	PPP4R1	0.986	1
PLCXD3	CTCF	0.986	1
PLCXD3	PPARG	0.986	1
PLCXD3	Del_Xp11.3	0.986	1
PROS1	MED13	0.986	1
PSIP1	STAG2	0.986	1
PSIP1	STK32B	0.986	1
PSIP1	ZNF773	0.986	1
RHOA	Amp_19q13.43	0.986	1
RHOB	20p-Amp	0.986	1
RXRA	Amp_17q23.3	0.986	1
SF3B1	Amp_17q23.3	0.986	1
SHANK1	HSP90AA1	0.986	1
SHANK1	ASXL1	0.986	1
TBC1D12	DLX6	0.986	1
TGIF2LX	Del_4q34.2	0.986	1
ZBTB7B	ZBTB47	0.986	1
ZFP36L1	CNOT1	0.986	1
ZFP36L1	Amp_1p34.2	0.986	1
ZFP36L1	Amp_10p14	0.986	1
AGR3	CTCF	0.986	1
AGR3	Del_11p15.5	0.986	1
AGR3	Del_Xp11.3	0.986	1
ARID2	IKZF2	0.986	1
ARID2	RBM10	0.986	1
ARID2	THRAP3	0.986	1
ATAD5	PPP4R1	0.986	1
ATAD5	Amp_1q21.3	0.986	1
CCNE2	Del_4q34.2	0.986	1
CDK12	RARG	0.986	1
CDKN2AIPNL	RBM26	0.986	1
CPD	Amp_4p16.3	0.986	1
CTCF	RBP2	0.986	1
CTCF	DAZAP1	0.986	1
DENND5B	Amp_6q21	0.986	1
DLX6	Amp_19q12	0.986	1
EXOSC10	Amp_1p34.2	0.986	1
HFM1	RBM10	0.986	1
HFM1	SF3B3	0.986	1
ITGA4	Amp_22q12.2	0.986	1
KDM5A	SF3B3	0.986	1
KDM5A	TRERF1	0.986	1
MARK2	ADC	0.986	1
MARK2	DAZAP1	0.986	1
MBD1	DAZAP1	0.986	1
NCOA1	SF3B3	0.986	1
NCOA1	CNOT1	0.986	1
NDC80	4p-Del	0.986	1
NKX2-2	ASXL1	0.986	1
NKX2-2	Del_12p13.1	0.986	1
PARD3	Del_4q22.1	0.986	1
PPARG	RBP2	0.986	1
PPARG	DAZAP1	0.986	1
PSMC6	UBA52	0.986	1
PSMC6	ZBTB47	0.986	1
PSMC6	UNC93B1	0.986	1
STK32B	UBA52	0.986	1
STK32B	UNC93B1	0.986	1
TFG	ASXL1	0.986	1
TXNIP	Amp_1q23.3	0.986	1
UBA52	ZNF773	0.986	1
USP28	DAZAP1	0.986	1
WAC	5p-Amp	0.986	1
ZBTB47	3q-Amp	0.986	1
ZBTB47	Amp_6q21	0.986	1
ADC	Del_11p15.5	0.986	1
ADC	Del_Xp11.3	0.986	1
CNOT3	7q-Amp	0.986	1
HLA-A	ZNF773	0.986	1
HLA-A	Amp_6q21	0.986	1
19q-Amp	Del_11p15.5	0.986	1
1q-Amp	Amp_1p34.2	0.986	1
3q-Amp	Amp_19q13.43	0.986	1
7p-Amp	8q-Amp	0.986	1
8q-Amp	Del_15q13.1	0.986	1
11p-Del	Del_2q34	0.986	1
11q-Del	16p-Del	0.986	1
11q-Del	22q-Del	0.986	1
15q-Del	Amp_6q21	0.986	1
16p-Del	Amp_1q21.3	0.986	1
22q-Del	Amp_1q21.3	0.986	1
6q-Del	Amp_19q13.43	0.986	1
Amp_1p34.2	Amp_3p25.2	0.986	1
Amp_1q23.3	Del_19p13.3	0.986	1
Amp_6q21	Del_4q22.1	0.986	1
Amp_7p11.2	Amp_22q12.2	0.986	1
Amp_10p14	Amp_20q11.21	0.986	1
Amp_10p14	Del_22q13.32	0.986	1
Amp_17q23.3	Amp_19q12	0.986	1
Amp_20q11.21	Del_9p23	0.986	1
Del_2q34	Del_15q13.1	0.986	1
Del_3p14.2	Del_8p23.3	0.986	1
Del_8p23.3	Del_16q23.1	0.986	1
BTG2	CDK12	0.987	1
BTG2	14q-Del	0.987	1
C3orf70	ARID1B	0.987	1
CDKN1A	PKHD1	0.987	1
CDKN2A	ZNF180	0.987	1
CDKN2A	DDX3X	0.987	1
CDKN2A	4q-Del	0.987	1
CNNM4	SF3B3	0.987	1
COPZ2	14q-Del	0.987	1
COPZ2	Del_17p12	0.987	1
CSMD3	ZNF180	0.987	1
CSMD3	NAA15	0.987	1
CSMD3	NDC80	0.987	1
CSMD3	Amp_6q21	0.987	1
CTNNB1	DDX3X	0.987	1
CTNNB1	NAA15	0.987	1
DIAPH2	NKX2-2	0.987	1
ELF3	KDM6A	0.987	1
ERBB3	NDC80	0.987	1
ERCC2	HSP90AA1	0.987	1
ERCC2	NEK11	0.987	1
ERCC2	PPARGC1A	0.987	1
ERCC2	Amp_1q21.3	0.987	1
FBXW7	11q-Del	0.987	1
FOXQ1	RPTN	0.987	1
FOXQ1	DDX3X	0.987	1
FOXQ1	RARG	0.987	1
FOXQ1	Amp_7p11.2	0.987	1
GTF2I	Del_4q34.2	0.987	1
HIST1H3B	TSC1	0.987	1
HRAS	ARID1B	0.987	1
IDH1	NFE2L2	0.987	1
IDH1	Amp_11q22.2	0.987	1
KDM6A	NFE2L3	0.987	1
KDM6A	9q-Del	0.987	1
KLF5	ZFP36L2	0.987	1
KPTN	4p-Del	0.987	1
KRAS	19q-Amp	0.987	1
MIPOL1	CPD	0.987	1
NFE2L3	ZNF180	0.987	1
NFE2L3	DDX3X	0.987	1
NFE2L3	NDC80	0.987	1
NFE2L3	Amp_4q13.3	0.987	1
PKHD1	UBA52	0.987	1
PKHD1	ZBTB47	0.987	1
PKHD1	HLA-A	0.987	1
PROS1	Amp_10p14	0.987	1
PSIP1	20p-Amp	0.987	1
RB1	PPARGC1A	0.987	1
RHOB	RPTN	0.987	1
RHOB	NDC80	0.987	1
RHOB	4q-Del	0.987	1
RPTN	DLX6	0.987	1
RPTN	THRAP3	0.987	1
RUNX1	DDX3X	0.987	1
RXRA	Del_17p12	0.987	1
SARNP	SF3B1	0.987	1
TSC1	17q-Amp	0.987	1
ZFP36L1	Del_16p13.3	0.987	1
ZNF180	CASP8	0.987	1
ZNF180	DCDC1	0.987	1
ZNF180	IKZF2	0.987	1
ZNF180	CDH1	0.987	1
ZNF180	EPS8	0.987	1
ZNF180	ZNF185	0.987	1
ZNF180	1q-Amp	0.987	1
ATAD5	UBA52	0.987	1
ATAD5	ZBTB47	0.987	1
CASP8	RARG	0.987	1
CCNE2	CDK12	0.987	1
CDK12	TAF11	0.987	1
CDK12	19p-Del	0.987	1
CDKN2AIPNL	Amp_4p16.3	0.987	1
DCDC1	SPTAN1	0.987	1
DDX3X	ZNF750	0.987	1
DLX6	Del_9p21.3	0.987	1
EPHA2	10q-Del	0.987	1
EPHA2	Del_15q13.1	0.987	1
IKZF2	SPTAN1	0.987	1
ITGA4	Del_4q34.2	0.987	1
MED13	UBA52	0.987	1
MED13	14q-Del	0.987	1
NAA15	EPS8	0.987	1
NDC80	EPS8	0.987	1
NDC80	FUT5	0.987	1
NKX2-2	Del_13q14.2	0.987	1
OR10Z1	22q-Del	0.987	1
PPARGC1A	Del_4q34.2	0.987	1
RARG	THRAP3	0.987	1
RBP2	Del_4q22.1	0.987	1
SF3B3	TFG	0.987	1
TFG	FAM47C	0.987	1
TXNIP	Del_4q34.2	0.987	1
WAC	Amp_7p11.2	0.987	1
ZNF626	ARID1B	0.987	1
BAP1	Amp_1q21.3	0.987	1
FUT5	Amp_17q23.3	0.987	1
20p-Amp	7q-Amp	0.987	1
3p-Amp	Del_11q23.3	0.987	1
3q-Amp	Amp_1q23.3	0.987	1
3q-Amp	Del_9p21.3	0.987	1
11p-Del	8p-Del	0.987	1
11q-Del	Amp_3q26.33	0.987	1
14q-Del	Del_11q23.3	0.987	1
16p-Del	Amp_6p22.3	0.987	1
16p-Del	Amp_22q12.2	0.987	1
18q-Del	Del_8p21.3	0.987	1
19p-Del	4p-Del	0.987	1
5q-Del	Amp_16p13.2	0.987	1
Amp_1q21.3	Amp_6q21	0.987	1
Amp_3q26.33	Amp_6p22.3	0.987	1
Amp_6p22.3	Del_3p14.2	0.987	1
Amp_7p11.2	Del_16q23.1	0.987	1
Amp_8p11.21	Del_11p15.5	0.987	1
Amp_11q13.3	Del_3p14.2	0.987	1
Amp_20q11.21	Del_19p13.3	0.987	1
Amp_22q12.2	Del_10q23.31	0.987	1
Del_1p36.11	Del_7q36.3	0.987	1
Del_4q22.1	Del_8p23.3	0.987	1
Del_5q12.1	Del_16q23.1	0.987	1
ARID1A	Del_Xq21.33	0.988	1
ASXL2	PLCXD3	0.988	1
ASXL2	AGR3	0.988	1
ASXL2	PSMC6	0.988	1
ASXL2	CNOT3	0.988	1
ASXL2	ZNF773	0.988	1
ASXL2	Del_18q23	0.988	1
BTG2	SARNP	0.988	1
BTG2	OR10Z1	0.988	1
C12orf43	IDH1	0.988	1
C3orf70	TMCO4	0.988	1
CDKN2A	KPTN	0.988	1
CDKN2A	TGIF2LX	0.988	1
CDKN2A	CCNE2	0.988	1
CFHR4	NF1	0.988	1
CFHR4	SSH3	0.988	1
CNNM4	5p-Amp	0.988	1
CSMD3	NCOA1	0.988	1
ELF3	RHOA	0.988	1
ELF3	TBC1D12	0.988	1
EP300	EXOSC10	0.988	1
EP300	WAC	0.988	1
EP300	ZNF750	0.988	1
ERBB3	7q-Amp	0.988	1
ERCC2	Amp_6p22.3	0.988	1
ERCC2	Del_22q13.32	0.988	1
FBXW7	NCOA1	0.988	1
FBXW7	OGDH	0.988	1
FOXA1	Amp_6p22.3	0.988	1
GTF2I	SF3B1	0.988	1
GTF2I	MYO16	0.988	1
HIST1H2AG	OR10Z1	0.988	1
HIST1H2AG	UGP2	0.988	1
HIST1H3B	ZNF626	0.988	1
HIST1H3B	DAZAP1	0.988	1
HORMAD1	HFM1	0.988	1
HORMAD1	KDM5A	0.988	1
HORMAD1	NCOA1	0.988	1
IDH1	KLF5	0.988	1
IDH1	TGIF2LX	0.988	1
IDH1	CCNE2	0.988	1
IDH1	19p-Del	0.988	1
KDM6A	UGP2	0.988	1
METTL3	Del_3p14.2	0.988	1
MIPOL1	NRAS	0.988	1
MIPOL1	ZBTB47	0.988	1
MIPOL1	HLA-A	0.988	1
NF1	Amp_7p11.2	0.988	1
NHLRC1	ZNF486	0.988	1
NHLRC1	FUS	0.988	1
NRAS	SF1	0.988	1
PKHD1	Amp_13q22.1	0.988	1
POTEG	TGIF2LX	0.988	1
POTEG	ARID1B	0.988	1
PROS1	TBC1D12	0.988	1
PROS1	NEK11	0.988	1
PROS1	TXNIP	0.988	1
PSIP1	HFM1	0.988	1
PTEN	Del_16q23.1	0.988	1
RHOB	CCNE2	0.988	1
RXRA	TXNIP	0.988	1
SARNP	TGIF2LX	0.988	1
SARNP	CCNE2	0.988	1
SARNP	IL10RB	0.988	1
SARNP	PARD3	0.988	1
SARNP	SNRPB	0.988	1
SARNP	7p-Amp	0.988	1
SF1	Amp_8q22.3	0.988	1
SF3B1	PPARGC1A	0.988	1
STAG2	NAA15	0.988	1
TGIF2LX	Del_2q34	0.988	1
TP53	Amp_3q26.33	0.988	1
ZBTB7B	NCOA1	0.988	1
ZFP36L2	GNA13	0.988	1
ZFP36L2	Del_1q32.1	0.988	1
ZNF486	CCNE2	0.988	1
ZNF486	IL10RB	0.988	1
ZNF511	ZBTB47	0.988	1
ACTB	GNA13	0.988	1
AGR3	Del_2q37.1	0.988	1
CCNE2	OR10Z1	0.988	1
CCNE2	FUS	0.988	1
CDKN2AIPNL	8q-Amp	0.988	1
CTCF	NEK11	0.988	1
DCDC1	Del_16q23.1	0.988	1
DENND5B	NCOA1	0.988	1
DENND5B	OGDH	0.988	1
DPYS	NEK11	0.988	1
DPYS	PPARGC1A	0.988	1
DPYS	SSH3	0.988	1
EPHA2	15q-Del	0.988	1
EPHA2	Amp_6q21	0.988	1
EXOSC10	17p-Del	0.988	1
GLTP	NKX2-2	0.988	1
HFM1	STK32B	0.988	1
ITGA4	Del_4q22.1	0.988	1
ITGA4	Del_Xp11.3	0.988	1
KDM5A	CNOT3	0.988	1
KDM5A	Amp_16p13.2	0.988	1
LETMD1	FUS	0.988	1
MYO16	NEK11	0.988	1
MYO16	TXNIP	0.988	1
NCOA1	PSMC6	0.988	1
NKX2-2	HLA-A	0.988	1
PARD3	UGP2	0.988	1
PARD3	FUS	0.988	1
PPARG	Del_9p23	0.988	1
PPARGC1A	USP28	0.988	1
PPP4R1	TXNIP	0.988	1
PPP4R1	Amp_7p21.1	0.988	1
RBM10	Del_14q24.1	0.988	1
RBP2	TMCO4	0.988	1
RBP2	Del_Xq21.33	0.988	1
RIPK4	Del_1q32.1	0.988	1
SLC9A4	GNA13	0.988	1
SLC9A4	5q-Del	0.988	1
SLC9A4	Del_5q12.1	0.988	1
SLC9A4	Del_19p13.3	0.988	1
SNRPB	UGP2	0.988	1
TFG	UBA52	0.988	1
THRAP3	Del_6p25.3	0.988	1
UGP2	19p-Del	0.988	1
USP28	Del_6q27	0.988	1
WAC	Amp_6p22.3	0.988	1
ZNF626	17q-Amp	0.988	1
ADC	Del_1q32.1	0.988	1
CDH1	17p-Del	0.988	1
CNOT3	OGDH	0.988	1
CUL1	Del_1q32.1	0.988	1
DAZAP1	TMCO4	0.988	1
DAZAP1	Del_1q32.1	0.988	1
EPS8	Del_16q23.1	0.988	1
FUS	SCARF2	0.988	1
OGDH	ZNF773	0.988	1
SPTAN1	9p-Del	0.988	1
ZNF773	Amp_8p11.23	0.988	1
20q-Amp	Amp_8p11.21	0.988	1
3q-Amp	Del_11q23.3	0.988	1
8q-Amp	Amp_17q23.3	0.988	1
11p-Del	Del_12p13.1	0.988	1
14q-Del	Del_12p13.1	0.988	1
Amp_1p34.2	Del_4q22.1	0.988	1
Amp_1q21.3	Amp_6p22.3	0.988	1
Amp_1q21.3	Amp_19q13.43	0.988	1
Amp_3p25.2	Amp_8p11.23	0.988	1
Amp_3p25.2	Del_2q37.1	0.988	1
Amp_6p22.3	Amp_6q21	0.988	1
Amp_7p21.1	Amp_17q23.3	0.988	1
Amp_7p21.1	Amp_19q13.43	0.988	1
Amp_7p21.1	Del_5q12.1	0.988	1
Amp_7p11.2	Amp_8p11.21	0.988	1
Amp_8p11.23	Del_7q36.3	0.988	1
Amp_19q13.43	Del_14q24.1	0.988	1
Del_1q32.1	Del_2q34	0.988	1
Del_2q22.1	Del_11q23.3	0.988	1
Del_6p25.3	Del_17p12	0.988	1
Del_6q27	Del_Xp11.3	0.988	1
Del_7q36.3	Del_16p13.3	0.988	1
Del_8p23.3	Del_9p23	0.988	1
Del_11q23.3	Del_15q13.1	0.988	1
ARID1A	KLF5	0.989	1
ATM	ELF3	0.989	1
ATM	NF1	0.989	1
BTG2	Del_11q23.3	0.989	1
CDKN1A	ZBTB7B	0.989	1
CDKN1A	9p-Del	0.989	1
CDKN2A	ATAD5	0.989	1
CNNM4	EP300	0.989	1
CSMD3	Del_13q14.2	0.989	1
CTNNB1	8q-Amp	0.989	1
DIAPH2	RHOA	0.989	1
ELF3	PPP4R1	0.989	1
ELF3	ARID1B	0.989	1
ELF3	Amp_20q11.21	0.989	1
EP300	TFG	0.989	1
ERBB2	SLC9A4	0.989	1
ERBB3	10q-Del	0.989	1
GPS2	7q-Amp	0.989	1
GPS2	17p-Del	0.989	1
HIST1H3B	10q-Del	0.989	1
HIST1H3B	Del_11q23.3	0.989	1
HORMAD1	SHANK1	0.989	1
HRAS	Del_12p13.1	0.989	1
IDH1	Del_16q23.1	0.989	1
KDM6A	EPHA2	0.989	1
KDM6A	NCOA1	0.989	1
KRAS	ZNF185	0.989	1
METTL3	PSMC6	0.989	1
METTL3	STK32B	0.989	1
METTL3	CNOT1	0.989	1
MIPOL1	DENND5B	0.989	1
MIPOL1	RBM26	0.989	1
NFE2L3	CDK12	0.989	1
NFE2L3	FUT5	0.989	1
NFE2L3	ZNF185	0.989	1
NFE2L3	Del_22q13.32	0.989	1
NHLRC1	Del_9p21.3	0.989	1
PIK3CA	PPARG	0.989	1
PIK3CA	USP28	0.989	1
PIK3CA	Del_9p21.3	0.989	1
PKHD1	Amp_20q11.21	0.989	1
PROS1	Del_8p23.3	0.989	1
PSIP1	TFG	0.989	1
PTEN	Del_22q13.32	0.989	1
RHOA	8q-Amp	0.989	1
RHOB	Amp_8q22.3	0.989	1
RUNX1	DLX6	0.989	1
RUNX1	FUT5	0.989	1
RUNX1	ZNF185	0.989	1
SARNP	SPTAN1	0.989	1
SHANK1	CNOT1	0.989	1
SHANK1	CNOT3	0.989	1
STAG2	9q-Del	0.989	1
TSC1	9q-Del	0.989	1
ZNF511	7q-Amp	0.989	1
ARID2	MBD1	0.989	1
ARID2	PPARG	0.989	1
CASP8	FUT5	0.989	1
CASP8	ZNF185	0.989	1
CCNE2	Amp_20q11.21	0.989	1
CDK12	THRAP3	0.989	1
CDK12	Amp_6p22.3	0.989	1
DLX6	CDH1	0.989	1
DLX6	Del_1p36.11	0.989	1
EXOSC10	ZNF185	0.989	1
EXOSC10	14q-Del	0.989	1
FAT1	GNA13	0.989	1
HSP90AA1	Amp_19q12	0.989	1
HSP90AA1	Del_4q22.1	0.989	1
IKZF2	FUT5	0.989	1
IKZF2	ZNF185	0.989	1
KDM5A	Del_6p25.3	0.989	1
KDM5A	Del_16p13.3	0.989	1
MBD1	Del_8p23.3	0.989	1
NCOA1	Del_16q23.1	0.989	1
NDC80	18q-Del	0.989	1
NKX2-2	7q-Amp	0.989	1
NKX2-2	Del_14q24.1	0.989	1
OR10Z1	Amp_7p11.2	0.989	1
RBM26	Amp_1p34.2	0.989	1
TRERF1	Del_13q14.2	0.989	1
WAC	FUT5	0.989	1
WAC	14q-Del	0.989	1
WAC	Del_22q13.32	0.989	1
ZNF750	FUT5	0.989	1
ZNF750	ZNF185	0.989	1
ADC	5q-Del	0.989	1
BAP1	14q-Del	0.989	1
BAP1	4p-Del	0.989	1
CDH1	ZNF185	0.989	1
FUS	SPTAN1	0.989	1
20p-Amp	9q-Del	0.989	1
20q-Amp	Del_1q32.1	0.989	1
3p-Amp	Del_12p13.1	0.989	1
3q-Amp	Amp_22q12.2	0.989	1
3q-Amp	Del_2q22.1	0.989	1
14q-Del	Amp_6p22.3	0.989	1
16p-Del	Amp_10p14	0.989	1
19p-Del	Del_11q23.3	0.989	1
22q-Del	Amp_10p14	0.989	1
6q-Del	Amp_22q12.2	0.989	1
6q-Del	Del_Xq21.33	0.989	1
8p-Del	Amp_8q22.3	0.989	1
8p-Del	Del_4q22.1	0.989	1
Amp_1q23.3	Amp_10p14	0.989	1
Amp_1q23.3	Del_6p25.3	0.989	1
Amp_3p25.2	Del_15q13.1	0.989	1
Amp_4p16.3	Amp_12q15	0.989	1
Amp_6p22.3	Del_2q37.1	0.989	1
Amp_6p22.3	Del_4q34.2	0.989	1
Amp_7p11.2	Amp_8q22.3	0.989	1
Amp_8p11.21	Del_15q13.1	0.989	1
Amp_16p13.2	Amp_20q11.21	0.989	1
Amp_16p13.2	Del_22q13.32	0.989	1
Amp_20q11.21	Del_22q13.32	0.989	1
Amp_22q12.2	Del_4q34.2	0.989	1
Amp_22q12.2	Del_11p15.5	0.989	1
Del_5q12.1	Del_Xp11.3	0.989	1
ARID1A	ERBB3	0.99	1
ARID1A	ZFP36L2	0.99	1
ARID1A	SLC9A4	0.99	1
ASXL2	NEK11	0.99	1
ASXL2	SSH3	0.99	1
ASXL2	Del_11p15.5	0.99	1
BTG2	LETMD1	0.99	1
BTG2	SCARF2	0.99	1
C12orf43	Del_2q22.1	0.99	1
C3orf70	TBC1D12	0.99	1
C3orf70	CDKN2AIPNL	0.99	1
CDKN2A	PTEN	0.99	1
CDKN2A	FAT1	0.99	1
CDKN2A	THRAP3	0.99	1
CFHR4	Del_7q36.3	0.99	1
COPZ2	SF3B1	0.99	1
COPZ2	PARD3	0.99	1
COPZ2	22q-Del	0.99	1
CSMD3	HLA-A	0.99	1
CSMD3	UNC93B1	0.99	1
CTNNB1	FOXA1	0.99	1
CTNNB1	KRAS	0.99	1
CTNNB1	PTEN	0.99	1
CTNNB1	RUNX1	0.99	1
CTNNB1	THRAP3	0.99	1
CTNNB1	ZNF750	0.99	1
CTNNB1	BAP1	0.99	1
EP300	Del_8p21.3	0.99	1
ERBB2	NHLRC1	0.99	1
ERBB2	CCNE2	0.99	1
ERBB2	SCARF2	0.99	1
ERBB3	Amp_6p22.3	0.99	1
ERCC2	MIPOL1	0.99	1
ERCC2	ZNF180	0.99	1
ERCC2	CPD	0.99	1
FOXA1	RHOB	0.99	1
FOXA1	ZNF750	0.99	1
GPR50	CDH1	0.99	1
GTF2I	GNA13	0.99	1
GTF2I	TMCO4	0.99	1
GTF2I	4q-Del	0.99	1
GTF2I	Amp_17q12	0.99	1
GTF2I	Del_Xq21.33	0.99	1
HIST1H2AG	TGIF2LX	0.99	1
HIST1H2AG	CCNE2	0.99	1
HIST1H2AG	IL10RB	0.99	1
HIST1H2AG	PHLDA3	0.99	1
HIST1H3B	RB1	0.99	1
HIST1H3B	MED13	0.99	1
HIST1H3B	Del_17p12	0.99	1
IDH1	HSP90AA1	0.99	1
KDM6A	NF1	0.99	1
KDM6A	Amp_17q12	0.99	1
KDM6A	Del_8p23.3	0.99	1
KLF5	SSH3	0.99	1
KPTN	PIK3CA	0.99	1
KPTN	RXRA	0.99	1
KPTN	MYO16	0.99	1
KRAS	Amp_8q22.3	0.99	1
NF2	PLCXD3	0.99	1
NF2	AGR3	0.99	1
NFE2L2	Amp_3q26.33	0.99	1
NFE2L3	CASP8	0.99	1
NFE2L3	DCDC1	0.99	1
NHLRC1	SCARF2	0.99	1
NHLRC1	Amp_19q12	0.99	1
NRAS	Amp_1p34.2	0.99	1
PIGS	ASXL1	0.99	1
PIGS	Del_12p13.1	0.99	1
PLCXD3	ZBTB7B	0.99	1
PLCXD3	PSMC6	0.99	1
PLCXD3	Amp_6q21	0.99	1
PSIP1	Amp_20q11.21	0.99	1
PTEN	CASP8	0.99	1
PTEN	EXOSC10	0.99	1
PTTG1IP	RXRA	0.99	1
PTTG1IP	SF3B1	0.99	1
PTTG1IP	MYO16	0.99	1
RHOB	THRAP3	0.99	1
RHOB	WAC	0.99	1
RHOB	20q-Amp	0.99	1
RXRA	Del_6p25.3	0.99	1
SARNP	HSP90AA1	0.99	1
SF1	TP53	0.99	1
SF3B1	Amp_3q26.33	0.99	1
TBC1D12	TSC1	0.99	1
TGIF2LX	Amp_22q12.2	0.99	1
TP53	DPYS	0.99	1
TP53	Del_16q23.1	0.99	1
TP53	Del_17p12	0.99	1
ZFP36L2	CDKN2AIPNL	0.99	1
ZNF180	CTCF	0.99	1
ZNF180	PPP4R1	0.99	1
ZNF486	HSP90AA1	0.99	1
AGR3	STK32B	0.99	1
AGR3	ZNF773	0.99	1
AGR3	Amp_6q21	0.99	1
ARID2	GLTP	0.99	1
ARID2	UBA52	0.99	1
ARID2	ZBTB47	0.99	1
CASP8	CDH1	0.99	1
CCNE2	IL10RB	0.99	1
CCNE2	PHLDA3	0.99	1
CTCF	RARG	0.99	1
DDX3X	Amp_3q26.33	0.99	1
DLX6	PPP4R1	0.99	1
DLX6	20p-Amp	0.99	1
EPHA2	Del_22q13.32	0.99	1
EXOSC10	Del_1p36.11	0.99	1
FAT1	Del_10q23.31	0.99	1
HFM1	KDM5A	0.99	1
HFM1	NCOA1	0.99	1
HFM1	20p-Amp	0.99	1
HSP90AA1	Amp_17q12	0.99	1
IL10RB	LETMD1	0.99	1
IL10RB	PHLDA3	0.99	1
ITGA4	PARD3	0.99	1
ITGA4	4q-Del	0.99	1
LETMD1	Amp_22q12.2	0.99	1
MBD1	ZNF185	0.99	1
MBD1	Del_7q36.3	0.99	1
MBD1	Del_13q14.2	0.99	1
MED13	TMCO4	0.99	1
MED13	Del_Xq21.33	0.99	1
NEK11	Amp_17q12	0.99	1
NEK11	Del_2q34	0.99	1
OR10Z1	Del_22q13.32	0.99	1
PARD3	DNAH6	0.99	1
PHLDA3	TAF11	0.99	1
PPARG	FUT5	0.99	1
PPARG	Amp_1q23.3	0.99	1
PPARGC1A	TMCO4	0.99	1
PPARGC1A	Amp_17q12	0.99	1
PPP4R1	FUT5	0.99	1
PPP4R1	ZNF185	0.99	1
PSMC6	DAZAP1	0.99	1
RARG	USP28	0.99	1
RBM26	Amp_6p22.3	0.99	1
RBP2	STK32B	0.99	1
RBP2	CNOT3	0.99	1
SLC9A4	Del_6q27	0.99	1
SNRPB	19p-Del	0.99	1
SSH3	ARID1B	0.99	1
TRERF1	4p-Del	0.99	1
ZNF626	Del_6q27	0.99	1
ASXL1	FUS	0.99	1
BAP1	Amp_8q22.3	0.99	1
CDH1	Del_1p36.11	0.99	1
DNAH6	TMCO4	0.99	1
DNAH6	17q-Amp	0.99	1
FAM47C	Amp_8q22.3	0.99	1
FUT5	20p-Amp	0.99	1
FUT5	Del_9p23	0.99	1
FUT5	Del_Xp11.3	0.99	1
TMCO4	9p-Del	0.99	1
ZNF773	Amp_3p25.2	0.99	1
17q-Amp	Amp_8p11.21	0.99	1
17q-Amp	Del_17p12	0.99	1
20p-Amp	Del_8p23.3	0.99	1
5p-Amp	Amp_13q22.1	0.99	1
5p-Amp	Del_16q23.1	0.99	1
14q-Del	Amp_19q12	0.99	1
16p-Del	Del_6p25.3	0.99	1
18q-Del	Del_10q23.31	0.99	1
18q-Del	Del_11q25	0.99	1
22q-Del	Del_6p25.3	0.99	1
5q-Del	Del_4q22.1	0.99	1
9p-Del	Del_Xq21.33	0.99	1
Amp_3p25.2	Amp_13q22.1	0.99	1
Amp_7p11.2	Amp_19q12	0.99	1
Amp_8p11.23	Amp_13q22.1	0.99	1
Amp_8p11.21	Del_6p25.3	0.99	1
Amp_8q22.3	Del_17p12	0.99	1
Amp_16p13.2	Del_Xq21.33	0.99	1
Del_1q32.1	Del_17p12	0.99	1
Del_11p15.5	Del_16p13.3	0.99	1
ARID1A	IDH1	0.991	1
ARID1A	PIGS	0.991	1
ARID1A	POTEG	0.991	1
ATM	NFE2L2	0.991	1
ATM	RPTN	0.991	1
ATM	ZBTB7B	0.991	1
ATM	Amp_1p34.2	0.991	1
ATM	Amp_8p11.23	0.991	1
BTG2	RXRA	0.991	1
BTG2	16p-Del	0.991	1
BTG2	Del_6q27	0.991	1
C12orf43	SF3B1	0.991	1
C3orf70	CPD	0.991	1
C3orf70	CNOT3	0.991	1
CDKN1A	ASXL1	0.991	1
CDKN1A	Del_18q23	0.991	1
CDKN2A	NF1	0.991	1
CNNM4	KDM5A	0.991	1
CNNM4	NCOA1	0.991	1
COPZ2	Amp_1q21.3	0.991	1
COPZ2	Amp_6p22.3	0.991	1
CSMD3	CASP8	0.991	1
CSMD3	ZNF750	0.991	1
CSMD3	CDH1	0.991	1
EP300	ACTB	0.991	1
ERBB3	IDH1	0.991	1
ERBB3	MED13	0.991	1
FBXW7	METTL3	0.991	1
GPS2	OGDH	0.991	1
GPS2	Amp_4p16.3	0.991	1
GTF2I	FAT1	0.991	1
HIST1H2AG	TBC1D12	0.991	1
HORMAD1	RIPK4	0.991	1
HORMAD1	Del_4q34.2	0.991	1
HRAS	CNOT3	0.991	1
IDH1	CPD	0.991	1
IDH1	RBM10	0.991	1
IDH1	FAM47C	0.991	1
IDH1	Amp_10p14	0.991	1
KDM6A	Amp_6q21	0.991	1
KDM6A	Del_8p21.3	0.991	1
KPTN	Amp_6p22.3	0.991	1
METTL3	MED13	0.991	1
METTL3	Del_2q37.1	0.991	1
NF1	TMCO4	0.991	1
NF2	ZNF626	0.991	1
NHLRC1	MYO16	0.991	1
NHLRC1	Del_6q27	0.991	1
PIGS	TRERF1	0.991	1
PIGS	UBA52	0.991	1
PIK3CA	NKX2-2	0.991	1
PIK3CA	TFG	0.991	1
PKHD1	SHANK1	0.991	1
POTEG	UBA52	0.991	1
PSIP1	Del_5q12.1	0.991	1
PTTG1IP	HSP90AA1	0.991	1
RB1	Del_2q34	0.991	1
SARNP	RBM10	0.991	1
SARNP	SF3B3	0.991	1
SARNP	UBA52	0.991	1
SARNP	HLA-A	0.991	1
SARNP	UNC93B1	0.991	1
SF3B1	CCNE2	0.991	1
SF3B1	DDX3X	0.991	1
SF3B1	RARG	0.991	1
SF3B1	SCARF2	0.991	1
SHANK1	ATAD5	0.991	1
SHANK1	MED13	0.991	1
SHANK1	Del_2q37.1	0.991	1
TGIF2LX	MYO16	0.991	1
TGIF2LX	16p-Del	0.991	1
TP53	8p-Del	0.991	1
TP53	Del_13q14.2	0.991	1
ZBTB7B	ACTB	0.991	1
ZNF486	UNC93B1	0.991	1
ACTB	STK32B	0.991	1
ACTB	ZNF773	0.991	1
CDK12	UBA52	0.991	1
DENND5B	Del_14q24.1	0.991	1
EPHA2	TFG	0.991	1
GLTP	4p-Del	0.991	1
HFM1	TFG	0.991	1
HSP90AA1	NEK11	0.991	1
HSP90AA1	SSH3	0.991	1
IL10RB	MYO16	0.991	1
LETMD1	Amp_7p21.1	0.991	1
MYO16	PHLDA3	0.991	1
NCOA1	TFG	0.991	1
NCOA1	Del_10q23.31	0.991	1
OR10Z1	SF3B3	0.991	1
OR10Z1	FAM47C	0.991	1
OR10Z1	Amp_10p14	0.991	1
PPARG	SPTAN1	0.991	1
PPP4R1	Amp_7p11.2	0.991	1
RBM10	SLC9A4	0.991	1
RIPK4	SF3B3	0.991	1
RIPK4	Del_3p14.2	0.991	1
SLC9A4	CNOT1	0.991	1
SLC9A4	ZNF773	0.991	1
SNRPB	Del_6q27	0.991	1
STK32B	ZNF626	0.991	1
TFG	OGDH	0.991	1
TXNIP	11q-Del	0.991	1
UBA52	FUS	0.991	1
UGP2	ZBTB47	0.991	1
UGP2	HLA-A	0.991	1
FUS	UNC93B1	0.991	1
SCARF2	Amp_7p21.1	0.991	1
UNC93B1	4p-Del	0.991	1
7p-Amp	Amp_6p22.3	0.991	1
11p-Del	Del_13q14.2	0.991	1
11q-Del	Del_12p13.1	0.991	1
15q-Del	Del_17p12	0.991	1
16p-Del	4q-Del	0.991	1
16p-Del	Amp_4q13.3	0.991	1
16p-Del	Del_15q13.1	0.991	1
18q-Del	Del_3p14.2	0.991	1
19p-Del	22q-Del	0.991	1
19p-Del	Del_11q25	0.991	1
9p-Del	Del_6q27	0.991	1
Amp_1q23.3	Amp_3q26.33	0.991	1
Amp_1q23.3	Amp_16p13.2	0.991	1
Del_3p14.2	Del_14q24.1	0.991	1
Del_8p21.3	Del_12p13.1	0.991	1
Del_17p12	Del_22q13.32	0.991	1
ARID1A	DCDC1	0.992	1
ARID1A	WAC	0.992	1
ASXL2	CPD	0.992	1
ASXL2	NKX2-2	0.992	1
ASXL2	RARG	0.992	1
ATM	CDKN2AIPNL	0.992	1
BTG2	Del_3p14.2	0.992	1
C12orf43	KLF5	0.992	1
C12orf43	PARD3	0.992	1
C3orf70	PSIP1	0.992	1
C3orf70	RBM26	0.992	1
CDKN1A	GPS2	0.992	1
CDKN2A	ZFP36L1	0.992	1
CDKN2A	UNC93B1	0.992	1
CFHR4	GPR50	0.992	1
CFHR4	PTEN	0.992	1
CFHR4	Del_6p25.3	0.992	1
CNNM4	METTL3	0.992	1
CNNM4	PLCXD3	0.992	1
COPZ2	CPD	0.992	1
COPZ2	SF3B3	0.992	1
DIAPH2	PTTG1IP	0.992	1
ELF3	GNA13	0.992	1
EP300	MBD1	0.992	1
EP300	USP28	0.992	1
ERBB3	FAT1	0.992	1
ERCC2	DENND5B	0.992	1
FGFR3	Del_11q25	0.992	1
FOXA1	MARK2	0.992	1
FOXA1	PPP4R1	0.992	1
GPR50	PROS1	0.992	1
GPR50	CTCF	0.992	1
GPS2	AGR3	0.992	1
GPS2	RBP2	0.992	1
GPS2	11q-Del	0.992	1
GTF2I	Amp_1q21.3	0.992	1
HIST1H3B	NAA15	0.992	1
HIST1H3B	Amp_4q13.3	0.992	1
HIST1H3B	Del_6q27	0.992	1
KLF5	ZNF180	0.992	1
KPTN	RBM10	0.992	1
KPTN	TRERF1	0.992	1
METTL3	TFG	0.992	1
METTL3	Del_16q23.1	0.992	1
MIPOL1	Amp_17q12	0.992	1
NF1	8q-Amp	0.992	1
NF2	TXNIP	0.992	1
NFE2L3	DPYS	0.992	1
NFE2L3	Amp_22q12.2	0.992	1
NFE2L3	Del_16p13.3	0.992	1
PLCXD3	NKX2-2	0.992	1
POTEG	PSIP1	0.992	1
POTEG	RBM26	0.992	1
PROS1	RUNX1	0.992	1
PROS1	CASP8	0.992	1
PROS1	BAP1	0.992	1
PROS1	CDH1	0.992	1
PROS1	Del_16q23.1	0.992	1
PSIP1	CDK12	0.992	1
PSIP1	RIPK4	0.992	1
PSIP1	20q-Amp	0.992	1
PSIP1	14q-Del	0.992	1
PSIP1	Del_11q23.3	0.992	1
PTEN	DPYS	0.992	1
PTEN	Amp_22q12.2	0.992	1
PTTG1IP	RBM10	0.992	1
PTTG1IP	TRERF1	0.992	1
RHOA	TFG	0.992	1
SHANK1	ZNF511	0.992	1
SHANK1	KDM5A	0.992	1
SHANK1	Del_16q23.1	0.992	1
STAG2	1q-Amp	0.992	1
STAG2	4p-Del	0.992	1
TBC1D12	Del_11q23.3	0.992	1
ZFP36L1	17q-Amp	0.992	1
ZFP36L1	Del_16q23.1	0.992	1
ZFP36L2	RBM26	0.992	1
ZNF486	7q-Amp	0.992	1
ZNF511	RBP2	0.992	1
AGR3	ATAD5	0.992	1
ATAD5	DAZAP1	0.992	1
CCNE2	PARD3	0.992	1
CDK12	RBM26	0.992	1
CDKN2AIPNL	DDX3X	0.992	1
CDKN2AIPNL	NDC80	0.992	1
CDKN2AIPNL	RARG	0.992	1
CDKN2AIPNL	Del_4q34.2	0.992	1
CDKN2AIPNL	Del_7q36.3	0.992	1
CTCF	DCDC1	0.992	1
CTCF	ZNF750	0.992	1
DCDC1	USP28	0.992	1
DDX3X	Del_Xq21.33	0.992	1
DENND5B	OR10Z1	0.992	1
DENND5B	14q-Del	0.992	1
DPYS	Del_16q23.1	0.992	1
GLTP	Del_4q34.2	0.992	1
IKZF2	USP28	0.992	1
ITGA4	STK32B	0.992	1
ITGA4	ZNF773	0.992	1
ITGA4	Amp_8p11.21	0.992	1
KDM5A	Amp_1q21.3	0.992	1
LETMD1	7p-Amp	0.992	1
MBD1	WAC	0.992	1
NEK11	PSMC6	0.992	1
NEK11	ZNF773	0.992	1
NKX2-2	ADC	0.992	1
NKX2-2	Del_19p13.3	0.992	1
PARD3	RARG	0.992	1
PARD3	TAF11	0.992	1
PHLDA3	7p-Amp	0.992	1
PPARGC1A	ZNF773	0.992	1
PPP4R1	THRAP3	0.992	1
PPP4R1	4p-Del	0.992	1
PPP4R1	Amp_1q21.3	0.992	1
PSMC6	Del_15q13.1	0.992	1
RARG	GNA13	0.992	1
RBM26	ZNF626	0.992	1
SSH3	CNOT3	0.992	1
SSH3	Amp_8p11.21	0.992	1
STK32B	Del_2q34	0.992	1
TXNIP	Amp_6q21	0.992	1
UBA52	Del_10q23.31	0.992	1
USP28	WAC	0.992	1
USP28	Del_16q23.1	0.992	1
WAC	18q-Del	0.992	1
WAC	Del_14q24.1	0.992	1
ADC	Del_15q13.1	0.992	1
BAP1	Del_16p13.3	0.992	1
CDH1	Del_16p13.3	0.992	1
CUL1	15q-Del	0.992	1
DNAH6	Amp_19q12	0.992	1
GNA13	Del_6q27	0.992	1
SPTAN1	Del_18q23	0.992	1
TMCO4	Amp_1p34.2	0.992	1
TMCO4	Amp_4q13.3	0.992	1
TMCO4	Amp_17q23.3	0.992	1
TMCO4	Del_11q25	0.992	1
17q-Amp	19q-Amp	0.992	1
19q-Amp	9p-Del	0.992	1
1q-Amp	Del_16p13.3	0.992	1
20p-Amp	22q-Del	0.992	1
20q-Amp	7q-Amp	0.992	1
20q-Amp	Amp_7p21.1	0.992	1
20q-Amp	Del_5q12.1	0.992	1
3p-Amp	Del_11p15.5	0.992	1
3q-Amp	Del_11q25	0.992	1
7p-Amp	Amp_8q22.3	0.992	1
7p-Amp	Amp_10p14	0.992	1
10q-Del	Amp_16p13.2	0.992	1
10q-Del	Del_5q12.1	0.992	1
10q-Del	Del_11q25	0.992	1
11p-Del	Amp_19q13.43	0.992	1
11p-Del	Del_6p25.3	0.992	1
11q-Del	Del_2q34	0.992	1
14q-Del	Del_3p14.2	0.992	1
14q-Del	Del_16p13.3	0.992	1
17p-Del	Del_Xp11.3	0.992	1
18q-Del	Del_1p36.11	0.992	1
18q-Del	Del_4q34.2	0.992	1
19p-Del	Del_8p23.3	0.992	1
4p-Del	Del_3p14.2	0.992	1
4q-Del	Del_7q36.3	0.992	1
5q-Del	Del_9p21.3	0.992	1
8p-Del	Amp_8p11.21	0.992	1
9p-Del	Del_7q36.3	0.992	1
Amp_1p34.2	Amp_1q21.3	0.992	1
Amp_1q23.3	Del_22q13.32	0.992	1
Amp_3p25.2	Del_8p23.3	0.992	1
Amp_5p15.33	Amp_6p22.3	0.992	1
Amp_7p21.1	Del_8p23.3	0.992	1
Amp_7p11.2	Amp_19q13.43	0.992	1
Amp_8q22.3	Del_11p15.5	0.992	1
Amp_12q15	Del_11p15.5	0.992	1
Amp_19q12	Del_6p25.3	0.992	1
Amp_22q12.2	Del_1p36.11	0.992	1
Del_1p36.11	Del_16p13.3	0.992	1
Del_1p36.11	Del_Xp11.3	0.992	1
Del_2q22.1	Del_22q13.32	0.992	1
Del_6q27	Del_Xq21.33	0.992	1
Del_7q36.3	Del_9p23	0.992	1
Del_8p21.3	Del_16q23.1	0.992	1
Del_11q25	Del_15q13.1	0.992	1
ARID1A	ATM	0.993	1
ASXL2	Amp_1q21.3	0.993	1
ATM	ERCC2	0.993	1
BTG2	HLA-A	0.993	1
BTG2	Del_2q37.1	0.993	1
C12orf43	NRAS	0.993	1
C12orf43	HSP90AA1	0.993	1
C12orf43	HLA-A	0.993	1
CDKN1A	11q-Del	0.993	1
CDKN2A	Del_4q22.1	0.993	1
CDKN2A	Del_6q27	0.993	1
CFHR4	CTCF	0.993	1
CNNM4	RIPK4	0.993	1
CNNM4	ZNF626	0.993	1
COPZ2	PSIP1	0.993	1
COPZ2	Del_11p15.5	0.993	1
CTNNB1	Del_Xq21.33	0.993	1
ERBB2	MED13	0.993	1
ERBB2	Del_10q23.31	0.993	1
ERCC2	EPS8	0.993	1
ERCC2	ZNF185	0.993	1
FOXA1	CDKN2AIPNL	0.993	1
FOXA1	17q-Amp	0.993	1
FOXQ1	HIST1H3B	0.993	1
FOXQ1	CDKN2AIPNL	0.993	1
GTF2I	CPD	0.993	1
HIST1H2AG	UBA52	0.993	1
HIST1H3B	PTEN	0.993	1
HIST1H3B	Del_8p21.3	0.993	1
IDH1	5p-Amp	0.993	1
KDM6A	Del_11q25	0.993	1
KLF5	PARD3	0.993	1
KRAS	RXRA	0.993	1
MIPOL1	CUL1	0.993	1
NF1	Del_2q22.1	0.993	1
NFE2L2	Del_1p36.11	0.993	1
NHLRC1	UBA52	0.993	1
NRAS	IL10RB	0.993	1
NRAS	Amp_22q12.2	0.993	1
PIK3CA	UNC93B1	0.993	1
PKHD1	ZFP36L2	0.993	1
PKHD1	ATAD5	0.993	1
PLCXD3	POTEG	0.993	1
PLCXD3	ZNF486	0.993	1
PLCXD3	OR10Z1	0.993	1
PLCXD3	FUS	0.993	1
POTEG	AGR3	0.993	1
POTEG	HFM1	0.993	1
POTEG	NCOA1	0.993	1
PTEN	SF3B1	0.993	1
PTEN	Del_1q32.1	0.993	1
PTTG1IP	DENND5B	0.993	1
RHOA	20p-Amp	0.993	1
RHOB	USP28	0.993	1
RHOB	Amp_20q11.21	0.993	1
RPTN	Del_2q34	0.993	1
RXRA	MED13	0.993	1
SARNP	AGR3	0.993	1
SARNP	OGDH	0.993	1
SF1	ZNF626	0.993	1
SF3B1	EPS8	0.993	1
TBC1D12	SSH3	0.993	1
TGIF2LX	ZBTB47	0.993	1
TGIF2LX	ASXL1	0.993	1
TGIF2LX	UNC93B1	0.993	1
TGIF2LX	Del_2q37.1	0.993	1
TP53	4p-Del	0.993	1
ZBTB7B	FUT5	0.993	1
ZNF180	HSP90AA1	0.993	1
ZNF486	HFM1	0.993	1
ACTB	NKX2-2	0.993	1
AGR3	OR10Z1	0.993	1
AGR3	UGP2	0.993	1
ARID2	Del_8p21.3	0.993	1
ATAD5	PSMC6	0.993	1
ATAD5	SLC9A4	0.993	1
CCNE2	HSP90AA1	0.993	1
CDK12	14q-Del	0.993	1
CDKN2AIPNL	EXOSC10	0.993	1
CDKN2AIPNL	Amp_8p11.21	0.993	1
CDKN2AIPNL	Del_1p36.11	0.993	1
CPD	NEK11	0.993	1
CPD	PPARGC1A	0.993	1
CTCF	MARK2	0.993	1
DCDC1	Del_2q37.1	0.993	1
DCDC1	Del_Xq21.33	0.993	1
DLX6	Amp_6q21	0.993	1
FAT1	Amp_4q13.3	0.993	1
GLTP	IL10RB	0.993	1
GLTP	PHLDA3	0.993	1
HFM1	Del_14q24.1	0.993	1
HSP90AA1	LETMD1	0.993	1
HSP90AA1	RARG	0.993	1
HSP90AA1	TAF11	0.993	1
HSP90AA1	19p-Del	0.993	1
IKZF2	Del_1q32.1	0.993	1
IL10RB	ZBTB47	0.993	1
IL10RB	ASXL1	0.993	1
KDM5A	Amp_5p15.33	0.993	1
LETMD1	UNC93B1	0.993	1
LETMD1	Amp_7p11.2	0.993	1
LETMD1	Del_12p13.1	0.993	1
MARK2	MBD1	0.993	1
MED13	RIPK4	0.993	1
MYO16	CDH1	0.993	1
NEK11	RBM10	0.993	1
NEK11	SF3B3	0.993	1
NKX2-2	CUL1	0.993	1
OR10Z1	OGDH	0.993	1
SNRPB	ZBTB47	0.993	1
STK32B	Del_2q37.1	0.993	1
TFG	Amp_19q13.43	0.993	1
THRAP3	Del_Xq21.33	0.993	1
TRERF1	11q-Del	0.993	1
UBA52	SCARF2	0.993	1
UGP2	Del_17p12	0.993	1
WAC	16p-Del	0.993	1
WAC	22q-Del	0.993	1
ZBTB47	19p-Del	0.993	1
ZNF626	Amp_16p13.2	0.993	1
ARID1B	Del_6p25.3	0.993	1
ASXL1	Del_7q36.3	0.993	1
BAP1	16p-Del	0.993	1
BAP1	Del_2q37.1	0.993	1
CDH1	TMCO4	0.993	1
DAZAP1	FUS	0.993	1
EPS8	TMCO4	0.993	1
EPS8	Del_Xq21.33	0.993	1
FUS	OGDH	0.993	1
FUS	Del_13q14.2	0.993	1
FUT5	ZNF773	0.993	1
TMCO4	1q-Amp	0.993	1
TMCO4	9q-Del	0.993	1
TMCO4	Del_8p21.3	0.993	1
1q-Amp	16p-Del	0.993	1
1q-Amp	Del_Xq21.33	0.993	1
20p-Amp	7p-Amp	0.993	1
8q-Amp	Amp_22q12.2	0.993	1
10q-Del	4q-Del	0.993	1
10q-Del	Del_3p14.2	0.993	1
11q-Del	Del_22q13.32	0.993	1
14q-Del	Amp_3p25.2	0.993	1
14q-Del	Del_9p23	0.993	1
15q-Del	Amp_3p25.2	0.993	1
15q-Del	Del_4q22.1	0.993	1
22q-Del	Amp_16p13.2	0.993	1
4p-Del	Del_11p15.5	0.993	1
8p-Del	Amp_16p13.2	0.993	1
Amp_3p25.2	Amp_3q26.33	0.993	1
Amp_6p22.3	Del_2q34	0.993	1
Amp_7p21.1	Del_6p25.3	0.993	1
Amp_16p13.2	Del_14q24.1	0.993	1
Del_1p36.11	Del_2q37.1	0.993	1
Del_1p36.11	Del_10q23.31	0.993	1
Del_1p36.11	Del_Xq21.33	0.993	1
Del_4q22.1	Del_6q27	0.993	1
Del_4q22.1	Del_8p21.3	0.993	1
Del_6p25.3	Del_10q23.31	0.993	1
Del_9p23	Del_Xq21.33	0.993	1
ASXL2	TSC1	0.994	1
ASXL2	FUT5	0.994	1
BTG2	CNOT1	0.994	1
BTG2	Del_16q23.1	0.994	1
BTG2	Del_22q13.32	0.994	1
C12orf43	TRERF1	0.994	1
C3orf70	HFM1	0.994	1
C3orf70	NCOA1	0.994	1
C3orf70	OGDH	0.994	1
COPZ2	METTL3	0.994	1
COPZ2	KDM5A	0.994	1
COPZ2	NCOA1	0.994	1
COPZ2	Amp_4p16.3	0.994	1
CSMD3	PROS1	0.994	1
CSMD3	PPP4R1	0.994	1
CTNNB1	PARD3	0.994	1
CTNNB1	7p-Amp	0.994	1
DIAPH2	HIST1H2AG	0.994	1
DIAPH2	NDC80	0.994	1
DIAPH2	16p-Del	0.994	1
ELF3	RHOB	0.994	1
EP300	PLCXD3	0.994	1
EP300	MYO16	0.994	1
EP300	RBP2	0.994	1
EP300	16p-Del	0.994	1
ERCC2	FBXW7	0.994	1
ERCC2	OGDH	0.994	1
FBXW7	TBC1D12	0.994	1
FBXW7	ARID1B	0.994	1
FOXA1	Del_4q34.2	0.994	1
GPS2	TSC1	0.994	1
GPS2	FUT5	0.994	1
GTF2I	MIPOL1	0.994	1
GTF2I	PSIP1	0.994	1
HIST1H2AG	SF3B3	0.994	1
HIST1H3B	Del_8p23.3	0.994	1
HORMAD1	NF1	0.994	1
HORMAD1	RPTN	0.994	1
HORMAD1	ZNF180	0.994	1
HORMAD1	RARG	0.994	1
KDM6A	PLCXD3	0.994	1
KLF5	PKHD1	0.994	1
KPTN	METTL3	0.994	1
KPTN	Del_2q37.1	0.994	1
METTL3	PIGS	0.994	1
METTL3	POTEG	0.994	1
METTL3	SHANK1	0.994	1
METTL3	OR10Z1	0.994	1
MIPOL1	PPARGC1A	0.994	1
MIPOL1	FUT5	0.994	1
NF1	PSMC6	0.994	1
NF1	ZNF626	0.994	1
NF2	NDC80	0.994	1
NFE2L2	FAT1	0.994	1
NFE2L3	Del_4q34.2	0.994	1
NRAS	RXRA	0.994	1
PSIP1	11p-Del	0.994	1
PTEN	Del_4q34.2	0.994	1
RB1	CCNE2	0.994	1
RB1	TAF11	0.994	1
RPTN	PSMC6	0.994	1
TBC1D12	20p-Amp	0.994	1
TGIF2LX	RBM10	0.994	1
TGIF2LX	Del_16q23.1	0.994	1
TP53	Del_8p23.3	0.994	1
ZBTB7B	DDX3X	0.994	1
ZBTB7B	RARG	0.994	1
ZNF180	CPD	0.994	1
ZNF180	TRERF1	0.994	1
ZNF180	CNOT1	0.994	1
ZNF180	FAM47C	0.994	1
ZNF511	ITGA4	0.994	1
AGR3	17p-Del	0.994	1
CASP8	PARD3	0.994	1
CASP8	ARID1B	0.994	1
CCNE2	TRERF1	0.994	1
CDKN2AIPNL	DPYS	0.994	1
CDKN2AIPNL	MBD1	0.994	1
CPD	PHLDA3	0.994	1
CPD	Amp_4q13.3	0.994	1
DDX3X	Amp_6q21	0.994	1
EPHA2	SLC9A4	0.994	1
EPHA2	Del_5q12.1	0.994	1
HFM1	Amp_20q11.21	0.994	1
HSP90AA1	Del_16q23.1	0.994	1
ITGA4	TFG	0.994	1
KDM5A	Del_5q12.1	0.994	1
LETMD1	Del_16q23.1	0.994	1
LETMD1	Del_22q13.32	0.994	1
MED13	ARID1B	0.994	1
MYO16	UBA52	0.994	1
MYO16	ZBTB47	0.994	1
NAA15	CNOT3	0.994	1
NAA15	FAM47C	0.994	1
NAA15	ZNF773	0.994	1
NAA15	Amp_6q21	0.994	1
NCOA1	CUL1	0.994	1
NEK11	Del_15q13.1	0.994	1
NKX2-2	Amp_3q26.33	0.994	1
OR10Z1	Del_18q23	0.994	1
PARD3	THRAP3	0.994	1
PARD3	ASXL1	0.994	1
PARD3	EPS8	0.994	1
PHLDA3	RBM10	0.994	1
PPARGC1A	RBM26	0.994	1
PPARGC1A	TFG	0.994	1
SSH3	TFG	0.994	1
SSH3	11p-Del	0.994	1
STK32B	Amp_4q13.3	0.994	1
THRAP3	Del_4q34.2	0.994	1
TRERF1	19p-Del	0.994	1
ZBTB47	HLA-A	0.994	1
ZNF626	Amp_1q23.3	0.994	1
ADC	17p-Del	0.994	1
ARID1B	Amp_3p25.2	0.994	1
ASXL1	Amp_10p14	0.994	1
BAP1	Del_4q34.2	0.994	1
CNOT1	19q-Amp	0.994	1
DAZAP1	Amp_1p34.2	0.994	1
EPS8	Del_4q22.1	0.994	1
GNA13	SPTAN1	0.994	1
SCARF2	Amp_12q15	0.994	1
TMCO4	14q-Del	0.994	1
TMCO4	Del_8p23.3	0.994	1
17q-Amp	Del_16q23.1	0.994	1
20p-Amp	Del_8p21.3	0.994	1
20q-Amp	Amp_1q23.3	0.994	1
20q-Amp	Amp_8q22.3	0.994	1
3p-Amp	Amp_1q23.3	0.994	1
5p-Amp	Del_5q12.1	0.994	1
7p-Amp	Del_4q34.2	0.994	1
7q-Amp	Amp_8q22.3	0.994	1
7q-Amp	Amp_22q12.2	0.994	1
10q-Del	Del_4q22.1	0.994	1
11p-Del	15q-Del	0.994	1
11p-Del	16p-Del	0.994	1
11q-Del	Del_5q12.1	0.994	1
14q-Del	9q-Del	0.994	1
14q-Del	Del_1q32.1	0.994	1
18q-Del	Del_4q22.1	0.994	1
19p-Del	Del_16q23.1	0.994	1
4p-Del	9q-Del	0.994	1
4p-Del	Del_19p13.3	0.994	1
6q-Del	Del_10q23.31	0.994	1
8p-Del	Del_16q23.1	0.994	1
9p-Del	Amp_11q13.3	0.994	1
9p-Del	Del_4q22.1	0.994	1
Amp_1q21.3	Amp_11q13.3	0.994	1
Amp_1q21.3	Amp_22q12.2	0.994	1
Amp_1q21.3	Del_5q12.1	0.994	1
Amp_1q21.3	Del_14q24.1	0.994	1
Amp_1q23.3	Amp_7p21.1	0.994	1
Amp_1q23.3	Del_12p13.1	0.994	1
Amp_3p25.2	Del_8p21.3	0.994	1
Amp_3q26.33	Del_6q27	0.994	1
Amp_3q26.33	Del_11q25	0.994	1
Amp_4q13.3	Del_2q22.1	0.994	1
Amp_6p22.3	Del_14q24.1	0.994	1
Amp_6p22.3	Del_16q23.1	0.994	1
Amp_7p21.1	Amp_10p14	0.994	1
Amp_10p14	Del_7q36.3	0.994	1
Amp_10p14	Del_16q23.1	0.994	1
Amp_11q22.2	Del_11q23.3	0.994	1
Amp_12q15	Del_Xq21.33	0.994	1
Amp_13q22.1	Del_Xq21.33	0.994	1
Amp_16p13.2	Del_5q12.1	0.994	1
Amp_17q23.3	Del_16q23.1	0.994	1
Amp_19q13.43	Del_8p21.3	0.994	1
Amp_19q13.43	Del_11p15.5	0.994	1
Amp_19q13.43	Del_17p12	0.994	1
Amp_20q11.21	Del_8p21.3	0.994	1
Del_1p36.11	Del_4q34.2	0.994	1
Del_2q22.1	Del_7q36.3	0.994	1
Del_3p14.2	Del_16p13.3	0.994	1
Del_4q22.1	Del_10q23.31	0.994	1
Del_6p25.3	Del_8p23.3	0.994	1
Del_10q23.31	Del_11p15.5	0.994	1
Del_11p15.5	Del_22q13.32	0.994	1
ARID1A	RBM10	0.995	1
ARID1A	FAM47C	0.995	1
ASXL2	SARNP	0.995	1
ASXL2	CASP8	0.995	1
BTG2	AGR3	0.995	1
BTG2	DENND5B	0.995	1
BTG2	KDM5A	0.995	1
BTG2	NCOA1	0.995	1
BTG2	Amp_10p14	0.995	1
C3orf70	COPZ2	0.995	1
C3orf70	POTEG	0.995	1
C3orf70	ARID2	0.995	1
CDKN1A	FGFR3	0.995	1
CDKN2A	PLCXD3	0.995	1
CDKN2A	CDK12	0.995	1
CDKN2A	DAZAP1	0.995	1
CFHR4	ARID1B	0.995	1
CNNM4	RPTN	0.995	1
CNNM4	DDX3X	0.995	1
COPZ2	ACTB	0.995	1
COPZ2	RIPK4	0.995	1
COPZ2	ZNF626	0.995	1
COPZ2	CUL1	0.995	1
COPZ2	DNAH6	0.995	1
COPZ2	Amp_10p14	0.995	1
CREBBP	DENND5B	0.995	1
CREBBP	RBM26	0.995	1
CREBBP	CNOT3	0.995	1
CSMD3	PLCXD3	0.995	1
CTNNB1	PSMC6	0.995	1
EP300	Del_16p13.3	0.995	1
ERBB2	ZNF180	0.995	1
ERBB2	ZBTB47	0.995	1
ERBB3	RIPK4	0.995	1
FGFR3	PPARG	0.995	1
FOXQ1	ZBTB7B	0.995	1
GPR50	ZNF773	0.995	1
GPS2	ZNF180	0.995	1
GPS2	Amp_16p13.2	0.995	1
GTF2I	KPTN	0.995	1
GTF2I	PTTG1IP	0.995	1
GTF2I	MED13	0.995	1
GTF2I	NCOA1	0.995	1
HIST1H3B	DPYS	0.995	1
HIST1H3B	20p-Amp	0.995	1
HORMAD1	THRAP3	0.995	1
HORMAD1	WAC	0.995	1
HORMAD1	1q-Amp	0.995	1
HORMAD1	Del_6q27	0.995	1
IDH1	ZFP36L2	0.995	1
KLF5	MBD1	0.995	1
KLF5	TRERF1	0.995	1
KLF5	USP28	0.995	1
KPTN	ZFP36L2	0.995	1
KPTN	ACTB	0.995	1
KPTN	3p-Amp	0.995	1
KPTN	8p-Del	0.995	1
METTL3	ZFP36L2	0.995	1
METTL3	ACTB	0.995	1
METTL3	Del_14q24.1	0.995	1
MIPOL1	ZNF180	0.995	1
MIPOL1	MED13	0.995	1
MIPOL1	NAA15	0.995	1
NF1	PIK3CA	0.995	1
NF1	ATAD5	0.995	1
NF1	7p-Amp	0.995	1
NF1	Amp_7p21.1	0.995	1
NF2	CASP8	0.995	1
NFE2L3	ZBTB7B	0.995	1
NFE2L3	PSMC6	0.995	1
NFE2L3	ZNF773	0.995	1
NHLRC1	RBP2	0.995	1
NHLRC1	DAZAP1	0.995	1
NRAS	Amp_19q12	0.995	1
PIGS	ZNF185	0.995	1
PIK3CA	SARNP	0.995	1
PIK3CA	TBC1D12	0.995	1
PIK3CA	ZNF486	0.995	1
POTEG	ZNF626	0.995	1
PROS1	RXRA	0.995	1
PROS1	STAG2	0.995	1
PROS1	16p-Del	0.995	1
PROS1	Amp_3p25.2	0.995	1
PSIP1	TBC1D12	0.995	1
PSIP1	TAF11	0.995	1
PTEN	PSMC6	0.995	1
PTEN	Del_2q34	0.995	1
RHOB	TMCO4	0.995	1
RPTN	15q-Del	0.995	1
RXRA	Del_8p23.3	0.995	1
RXRA	Del_14q24.1	0.995	1
SARNP	ZFP36L2	0.995	1
SARNP	SLC9A4	0.995	1
SARNP	ZNF626	0.995	1
SF3B1	PPP4R1	0.995	1
STAG2	RBM10	0.995	1
STAG2	TRERF1	0.995	1
TBC1D12	DENND5B	0.995	1
TBC1D12	UBA52	0.995	1
TGIF2LX	AGR3	0.995	1
TGIF2LX	HFM1	0.995	1
TGIF2LX	7q-Amp	0.995	1
TGIF2LX	Amp_10p14	0.995	1
TP53	Amp_6q21	0.995	1
ZFP36L2	ARID2	0.995	1
ZNF180	7q-Amp	0.995	1
ZNF486	Amp_17q12	0.995	1
AGR3	SNRPB	0.995	1
AGR3	14q-Del	0.995	1
ATAD5	TFG	0.995	1
CASP8	ASXL1	0.995	1
CASP8	ZNF773	0.995	1
CCNE2	EPHA2	0.995	1
CCNE2	RBP2	0.995	1
CCNE2	ADC	0.995	1
DCDC1	HSP90AA1	0.995	1
DCDC1	Del_12p13.1	0.995	1
DPYS	Amp_8p11.23	0.995	1
EPHA2	NEK11	0.995	1
EPHA2	5p-Amp	0.995	1
EXOSC10	Amp_17q12	0.995	1
GLTP	4q-Del	0.995	1
HFM1	ITGA4	0.995	1
HFM1	PPARGC1A	0.995	1
HFM1	TAF11	0.995	1
HSP90AA1	UNC93B1	0.995	1
IL10RB	ADC	0.995	1
ITGA4	NCOA1	0.995	1
ITGA4	Del_17p12	0.995	1
KDM5A	NEK11	0.995	1
KDM5A	SCARF2	0.995	1
LETMD1	RBP2	0.995	1
MARK2	Del_1q32.1	0.995	1
MBD1	PARD3	0.995	1
MBD1	GNA13	0.995	1
MED13	NEK11	0.995	1
MED13	DNAH6	0.995	1
NAA15	Amp_19q12	0.995	1
NCOA1	SSH3	0.995	1
NCOA1	DNAH6	0.995	1
NCOA1	Amp_3p25.2	0.995	1
OR10Z1	FUT5	0.995	1
OR10Z1	Amp_8q22.3	0.995	1
PARD3	UBA52	0.995	1
PARD3	CNOT1	0.995	1
PHLDA3	RBM26	0.995	1
PHLDA3	7q-Amp	0.995	1
PPARGC1A	OGDH	0.995	1
PPP4R1	7p-Amp	0.995	1
PPP4R1	4q-Del	0.995	1
PSMC6	THRAP3	0.995	1
RARG	TFG	0.995	1
RARG	Del_6q27	0.995	1
RBP2	TAF11	0.995	1
SNRPB	ADC	0.995	1
STK32B	ZNF750	0.995	1
STK32B	CDH1	0.995	1
STK32B	Del_1p36.11	0.995	1
TAF11	ADC	0.995	1
TXNIP	Amp_3p25.2	0.995	1
UBA52	ARID1B	0.995	1
UGP2	CUL1	0.995	1
USP28	ARID1B	0.995	1
USP28	16p-Del	0.995	1
WAC	5q-Del	0.995	1
ZBTB47	ARID1B	0.995	1
ZNF626	FUS	0.995	1
ZNF750	ASXL1	0.995	1
ADC	14q-Del	0.995	1
ARID1B	UNC93B1	0.995	1
ASXL1	HLA-A	0.995	1
BAP1	Amp_6q21	0.995	1
BAP1	Del_2q34	0.995	1
CUL1	FUS	0.995	1
DAZAP1	SCARF2	0.995	1
DAZAP1	14q-Del	0.995	1
FAM47C	Amp_7p11.2	0.995	1
GNA13	11p-Del	0.995	1
GNA13	Del_Xp11.3	0.995	1
TMCO4	Amp_1q23.3	0.995	1
UNC93B1	4q-Del	0.995	1
3q-Amp	Amp_20q11.21	0.995	1
7q-Amp	8q-Amp	0.995	1
8q-Amp	Amp_11q22.2	0.995	1
10q-Del	17p-Del	0.995	1
11p-Del	Amp_1q21.3	0.995	1
11p-Del	Amp_1q23.3	0.995	1
11p-Del	Del_15q13.1	0.995	1
11q-Del	15q-Del	0.995	1
11q-Del	Amp_1q23.3	0.995	1
14q-Del	Amp_1q23.3	0.995	1
14q-Del	Amp_13q22.1	0.995	1
15q-Del	Del_19p13.3	0.995	1
16p-Del	Amp_5p15.33	0.995	1
17p-Del	Del_1q32.1	0.995	1
17p-Del	Del_2q34	0.995	1
17p-Del	Del_15q13.1	0.995	1
17p-Del	Del_16p13.3	0.995	1
22q-Del	Amp_5p15.33	0.995	1
4p-Del	Del_2q37.1	0.995	1
4p-Del	Del_16q23.1	0.995	1
5q-Del	Del_2q37.1	0.995	1
5q-Del	Del_16p13.3	0.995	1
6q-Del	Amp_20q11.21	0.995	1
9p-Del	Amp_20q11.21	0.995	1
Amp_1p34.2	Amp_8p11.21	0.995	1
Amp_1p34.2	Del_15q13.1	0.995	1
Amp_1q23.3	Amp_4p16.3	0.995	1
Amp_1q23.3	Amp_8p11.21	0.995	1
Amp_1q23.3	Amp_17q23.3	0.995	1
Amp_3q26.33	Del_8p23.3	0.995	1
Amp_4q13.3	Amp_7p21.1	0.995	1
Amp_5p15.33	Del_14q24.1	0.995	1
Amp_7p21.1	Del_4q34.2	0.995	1
Amp_8p11.23	Del_Xp11.3	0.995	1
Amp_8q22.3	Amp_20q11.21	0.995	1
Amp_10p14	Del_2q34	0.995	1
Amp_11q13.3	Amp_20q11.21	0.995	1
Amp_11q13.3	Del_9p21.3	0.995	1
Amp_17q23.3	Amp_22q12.2	0.995	1
Amp_20q11.21	Del_6p25.3	0.995	1
Amp_20q11.21	Del_14q24.1	0.995	1
Del_1q32.1	Del_22q13.32	0.995	1
Del_2q22.1	Del_11p15.5	0.995	1
Del_4q22.1	Del_18q23	0.995	1
Del_4q34.2	Del_12p13.1	0.995	1
Del_4q34.2	Del_22q13.32	0.995	1
Del_5q12.1	Del_6p25.3	0.995	1
Del_6q27	Del_7q36.3	0.995	1
Del_6q27	Del_18q23	0.995	1
Del_8p21.3	Del_9p23	0.995	1
Del_9p23	Del_14q24.1	0.995	1
Del_11q25	Del_18q23	0.995	1
ASXL2	PROS1	0.996	1
ASXL2	CTCF	0.996	1
ASXL2	MED13	0.996	1
ASXL2	11p-Del	0.996	1
ATM	CFHR4	0.996	1
ATM	MED13	0.996	1
ATM	PPP4R1	0.996	1
BTG2	ERCC2	0.996	1
BTG2	METTL3	0.996	1
BTG2	FUT5	0.996	1
BTG2	ZNF185	0.996	1
C12orf43	SHANK1	0.996	1
C3orf70	ACTB	0.996	1
C3orf70	SLC9A4	0.996	1
CDKN1A	18q-Del	0.996	1
CDKN2A	HORMAD1	0.996	1
CDKN2A	PSMC6	0.996	1
CFHR4	PSMC6	0.996	1
CFHR4	ASXL1	0.996	1
CFHR4	ZNF773	0.996	1
CNNM4	NF1	0.996	1
COPZ2	ZNF180	0.996	1
COPZ2	DDX3X	0.996	1
COPZ2	RARG	0.996	1
COPZ2	19q-Amp	0.996	1
CSMD3	OR10Z1	0.996	1
CTNNB1	ZNF511	0.996	1
DIAPH2	ZBTB47	0.996	1
DIAPH2	EPS8	0.996	1
EP300	KPTN	0.996	1
EP300	NCOA1	0.996	1
ERBB2	RB1	0.996	1
ERBB2	5p-Amp	0.996	1
ERBB3	GNA13	0.996	1
ERCC2	NF1	0.996	1
ERCC2	IL10RB	0.996	1
ERCC2	Amp_17q12	0.996	1
FGFR3	SPTAN1	0.996	1
FGFR3	18q-Del	0.996	1
FOXA1	TRERF1	0.996	1
FOXQ1	Amp_19q13.43	0.996	1
GPR50	CPD	0.996	1
GTF2I	PIGS	0.996	1
GTF2I	FUS	0.996	1
GTF2I	Amp_1p34.2	0.996	1
HIST1H3B	GNA13	0.996	1
HIST1H3B	TMCO4	0.996	1
HIST1H3B	Del_14q24.1	0.996	1
HORMAD1	CDK12	0.996	1
KDM6A	PIK3CA	0.996	1
KPTN	RPTN	0.996	1
KPTN	Amp_4q13.3	0.996	1
METTL3	TGIF2LX	0.996	1
MIPOL1	CASP8	0.996	1
MIPOL1	DCDC1	0.996	1
NF1	TFG	0.996	1
NF2	CDKN2AIPNL	0.996	1
NF2	CTCF	0.996	1
NF2	DPYS	0.996	1
NFE2L3	FAT1	0.996	1
NHLRC1	DLX6	0.996	1
PIGS	NEK11	0.996	1
PIGS	SSH3	0.996	1
PIK3CA	BAP1	0.996	1
PKHD1	NAA15	0.996	1
POTEG	ITGA4	0.996	1
POTEG	PPARGC1A	0.996	1
POTEG	SSH3	0.996	1
PROS1	STK32B	0.996	1
PROS1	ZNF773	0.996	1
PROS1	Del_2q37.1	0.996	1
PSIP1	RUNX1	0.996	1
PSIP1	ARID1B	0.996	1
RB1	16p-Del	0.996	1
RB1	22q-Del	0.996	1
RHOA	Amp_5p15.33	0.996	1
RPTN	3q-Amp	0.996	1
RUNX1	Amp_1q23.3	0.996	1
RXRA	17q-Amp	0.996	1
SARNP	NEK11	0.996	1
SARNP	PPARGC1A	0.996	1
SHANK1	LETMD1	0.996	1
SHANK1	TXNIP	0.996	1
SHANK1	SCARF2	0.996	1
SHANK1	Amp_6p22.3	0.996	1
TBC1D12	ARID2	0.996	1
TBC1D12	16p-Del	0.996	1
TP53	4q-Del	0.996	1
ZBTB7B	CDKN2AIPNL	0.996	1
ZBTB7B	MBD1	0.996	1
ZFP36L1	DNAH6	0.996	1
ZNF180	ATAD5	0.996	1
ZNF180	5p-Amp	0.996	1
ZNF511	THRAP3	0.996	1
ZNF511	WAC	0.996	1
ZNF511	ZNF750	0.996	1
AGR3	UBA52	0.996	1
AGR3	Del_17p12	0.996	1
ARID2	MED13	0.996	1
ARID2	TXNIP	0.996	1
ATAD5	NAA15	0.996	1
ATAD5	ZNF185	0.996	1
ATAD5	Amp_6p22.3	0.996	1
CASP8	CPD	0.996	1
CASP8	RBM26	0.996	1
CDK12	SLC9A4	0.996	1
CDK12	ZNF773	0.996	1
CDKN2AIPNL	STK32B	0.996	1
CPD	HSP90AA1	0.996	1
CTCF	HSP90AA1	0.996	1
DCDC1	TFG	0.996	1
DENND5B	THRAP3	0.996	1
DENND5B	WAC	0.996	1
DPYS	HSP90AA1	0.996	1
DPYS	Amp_17q12	0.996	1
HSP90AA1	MBD1	0.996	1
HSP90AA1	TRERF1	0.996	1
HSP90AA1	5p-Amp	0.996	1
ITGA4	Del_8p23.3	0.996	1
LETMD1	Del_4q22.1	0.996	1
MED13	NAA15	0.996	1
MED13	Del_4q34.2	0.996	1
MYO16	TMCO4	0.996	1
NAA15	NCOA1	0.996	1
NEK11	20p-Amp	0.996	1
NKX2-2	ZNF750	0.996	1
PPARG	ASXL1	0.996	1
PPP4R1	ASXL1	0.996	1
RARG	6q-Del	0.996	1
RBM10	Del_6p25.3	0.996	1
RBM26	CDH1	0.996	1
RBP2	HLA-A	0.996	1
RBP2	UNC93B1	0.996	1
SF3B3	UBA52	0.996	1
SF3B3	ZBTB47	0.996	1
SNRPB	ZNF185	0.996	1
STK32B	USP28	0.996	1
TFG	1q-Amp	0.996	1
TFG	Del_2q37.1	0.996	1
TRERF1	WAC	0.996	1
UBA52	DAZAP1	0.996	1
UGP2	Amp_19q13.43	0.996	1
WAC	7q-Amp	0.996	1
ZNF626	Del_4q34.2	0.996	1
ADC	Del_17p12	0.996	1
ARID1B	Amp_1p34.2	0.996	1
ASXL1	CNOT1	0.996	1
BAP1	Amp_10p14	0.996	1
CNOT1	Amp_10p14	0.996	1
SPTAN1	15q-Del	0.996	1
19q-Amp	Amp_17q23.3	0.996	1
19q-Amp	Del_3p14.2	0.996	1
1q-Amp	Del_11q23.3	0.996	1
3q-Amp	8q-Amp	0.996	1
3q-Amp	Amp_3p25.2	0.996	1
5p-Amp	Amp_7p11.2	0.996	1
8q-Amp	Del_1q32.1	0.996	1
10q-Del	Del_6p25.3	0.996	1
10q-Del	Del_7q36.3	0.996	1
10q-Del	Del_18q23	0.996	1
10q-Del	Del_19p13.3	0.996	1
11p-Del	4q-Del	0.996	1
11q-Del	Del_14q24.1	0.996	1
14q-Del	Amp_22q12.2	0.996	1
15q-Del	Del_1p36.11	0.996	1
16p-Del	Del_Xq21.33	0.996	1
17p-Del	Amp_4p16.3	0.996	1
18q-Del	Del_17p12	0.996	1
19p-Del	Del_5q12.1	0.996	1
4p-Del	Del_2q34	0.996	1
4q-Del	Del_8p21.3	0.996	1
4q-Del	Del_14q24.1	0.996	1
6q-Del	Del_7q36.3	0.996	1
8p-Del	Amp_1q23.3	0.996	1
Amp_1q21.3	Amp_8q22.3	0.996	1
Amp_1q21.3	Amp_10p14	0.996	1
Amp_1q23.3	Amp_11q13.3	0.996	1
Amp_1q23.3	Del_8p21.3	0.996	1
Amp_1q23.3	Del_17p12	0.996	1
Amp_3p25.2	Del_13q14.2	0.996	1
Amp_5p15.33	Amp_19q12	0.996	1
Amp_6p22.3	Amp_16p13.2	0.996	1
Amp_7p11.2	Amp_8p11.23	0.996	1
Amp_8p11.23	Del_8p23.3	0.996	1
Amp_8p11.21	Del_14q24.1	0.996	1
Amp_8q22.3	Amp_11q22.2	0.996	1
Amp_10p14	Del_2q37.1	0.996	1
Amp_16p13.2	Amp_17q12	0.996	1
Amp_17q23.3	Amp_20q11.21	0.996	1
Amp_17q23.3	Del_17p12	0.996	1
Amp_19q13.43	Del_5q12.1	0.996	1
Amp_19q13.43	Del_8p23.3	0.996	1
Amp_19q13.43	Del_16p13.3	0.996	1
Amp_20q11.21	Del_1q32.1	0.996	1
Amp_20q11.21	Del_8p23.3	0.996	1
Amp_20q11.21	Del_Xq21.33	0.996	1
Del_1p36.11	Del_9p23	0.996	1
Del_1q32.1	Del_14q24.1	0.996	1
Del_2q34	Del_22q13.32	0.996	1
Del_3p14.2	Del_7q36.3	0.996	1
Del_9p21.3	Del_Xq21.33	0.996	1
ATM	ZNF486	0.997	1
ATM	FAT1	0.997	1
BTG2	CUL1	0.997	1
C12orf43	ZFP36L2	0.997	1
C12orf43	NEK11	0.997	1
C12orf43	Amp_17q12	0.997	1
C3orf70	SNRPB	0.997	1
C3orf70	SSH3	0.997	1
CDKN2A	SF3B1	0.997	1
CDKN2A	TP53	0.997	1
CFHR4	RBM10	0.997	1
CFHR4	SF3B3	0.997	1
CFHR4	TFG	0.997	1
CFHR4	7q-Amp	0.997	1
COPZ2	NFE2L3	0.997	1
COPZ2	PTEN	0.997	1
COPZ2	CASP8	0.997	1
COPZ2	EPS8	0.997	1
COPZ2	GNA13	0.997	1
COPZ2	Del_1q32.1	0.997	1
CREBBP	KRAS	0.997	1
CREBBP	RB1	0.997	1
CTNNB1	FBXW7	0.997	1
ELF3	MIPOL1	0.997	1
EP300	NF2	0.997	1
EP300	IL10RB	0.997	1
EP300	ASXL1	0.997	1
EP300	ZNF773	0.997	1
ERBB2	METTL3	0.997	1
ERCC2	HRAS	0.997	1
ERCC2	Amp_8p11.21	0.997	1
FBXW7	POTEG	0.997	1
FBXW7	CASP8	0.997	1
FBXW7	RBM10	0.997	1
GPR50	HFM1	0.997	1
GTF2I	ITGA4	0.997	1
GTF2I	NEK11	0.997	1
GTF2I	4p-Del	0.997	1
HIST1H2AG	TP53	0.997	1
HIST1H2AG	TXNIP	0.997	1
HIST1H3B	KPTN	0.997	1
HIST1H3B	ZNF773	0.997	1
HIST1H3B	Del_10q23.31	0.997	1
HIST1H3B	Del_16p13.3	0.997	1
HORMAD1	TMCO4	0.997	1
IDH1	NFE2L3	0.997	1
IDH1	PKHD1	0.997	1
IDH1	1q-Amp	0.997	1
IDH1	Amp_4q13.3	0.997	1
KPTN	MBD1	0.997	1
KPTN	WAC	0.997	1
KPTN	BAP1	0.997	1
KPTN	GNA13	0.997	1
KPTN	Del_16p13.3	0.997	1
KRAS	PTTG1IP	0.997	1
KRAS	NCOA1	0.997	1
METTL3	RARG	0.997	1
METTL3	UBA52	0.997	1
METTL3	22q-Del	0.997	1
MIPOL1	Amp_17q23.3	0.997	1
NF1	ZNF486	0.997	1
NFE2L2	CNOT3	0.997	1
NFE2L3	EPHA2	0.997	1
NFE2L3	Del_15q13.1	0.997	1
NRAS	DLX6	0.997	1
PIGS	ATAD5	0.997	1
PIGS	THRAP3	0.997	1
PIGS	WAC	0.997	1
PIK3CA	PSMC6	0.997	1
PIK3CA	9p-Del	0.997	1
PLCXD3	RBP2	0.997	1
PLCXD3	ASXL1	0.997	1
POTEG	DDX3X	0.997	1
POTEG	IKZF2	0.997	1
PROS1	SF1	0.997	1
PSIP1	CTCF	0.997	1
PSIP1	HSP90AA1	0.997	1
PSIP1	MARK2	0.997	1
PSIP1	ASXL1	0.997	1
PTEN	NCOA1	0.997	1
PTEN	UGP2	0.997	1
PTTG1IP	CTCF	0.997	1
PTTG1IP	ZNF750	0.997	1
RHOA	ZNF180	0.997	1
RHOA	5p-Amp	0.997	1
RHOB	TP53	0.997	1
RHOB	ACTB	0.997	1
RPTN	UGP2	0.997	1
RXRA	8p-Del	0.997	1
SARNP	EPS8	0.997	1
SARNP	Amp_1q21.3	0.997	1
SARNP	Del_10q23.31	0.997	1
SF3B1	CDK12	0.997	1
SHANK1	ZNF180	0.997	1
SHANK1	RARG	0.997	1
SHANK1	UBA52	0.997	1
STAG2	NEK11	0.997	1
STAG2	RBM26	0.997	1
TGIF2LX	NEK11	0.997	1
TGIF2LX	PPARGC1A	0.997	1
TGIF2LX	SLC9A4	0.997	1
TP53	NDC80	0.997	1
TP53	Amp_1p34.2	0.997	1
TP53	Amp_7p11.2	0.997	1
TP53	Del_16p13.3	0.997	1
TSC1	Del_9p21.3	0.997	1
ZFP36L2	CCNE2	0.997	1
ZNF486	EXOSC10	0.997	1
ZNF486	NAA15	0.997	1
ZNF486	THRAP3	0.997	1
ZNF511	CTCF	0.997	1
ZNF511	Amp_7p21.1	0.997	1
ACTB	TXNIP	0.997	1
AGR3	ARID1B	0.997	1
AGR3	ASXL1	0.997	1
AGR3	Del_11q23.3	0.997	1
ARID2	RARG	0.997	1
ATAD5	ZNF750	0.997	1
CCNE2	NEK11	0.997	1
CCNE2	DNAH6	0.997	1
CDK12	NEK11	0.997	1
CDK12	ARID1B	0.997	1
CDK12	DNAH6	0.997	1
CDK12	Del_15q13.1	0.997	1
CPD	CTCF	0.997	1
CPD	MBD1	0.997	1
CPD	PPP4R1	0.997	1
CPD	FAM47C	0.997	1
CTCF	CNOT1	0.997	1
DCDC1	FUS	0.997	1
DENND5B	MARK2	0.997	1
EPHA2	Amp_8q22.3	0.997	1
EPHA2	Amp_17q23.3	0.997	1
FAT1	DAZAP1	0.997	1
FAT1	Del_5q12.1	0.997	1
GLTP	Del_2q37.1	0.997	1
GLTP	Del_8p21.3	0.997	1
HFM1	UBA52	0.997	1
HFM1	ZBTB47	0.997	1
HFM1	CDH1	0.997	1
HFM1	Amp_19q13.43	0.997	1
IKZF2	KDM5A	0.997	1
IKZF2	OGDH	0.997	1
IL10RB	NEK11	0.997	1
IL10RB	ZNF626	0.997	1
IL10RB	Amp_17q12	0.997	1
ITGA4	LETMD1	0.997	1
ITGA4	NEK11	0.997	1
ITGA4	TAF11	0.997	1
KDM5A	ARID1B	0.997	1
KDM5A	EPS8	0.997	1
LETMD1	8q-Amp	0.997	1
MARK2	SF3B3	0.997	1
MBD1	RBM26	0.997	1
NAA15	OR10Z1	0.997	1
NAA15	Del_6p25.3	0.997	1
NAA15	Del_16q23.1	0.997	1
NCOA1	THRAP3	0.997	1
NCOA1	EPS8	0.997	1
NEK11	PPARGC1A	0.997	1
NEK11	SLC9A4	0.997	1
NEK11	TAF11	0.997	1
NKX2-2	PPARG	0.997	1
OR10Z1	WAC	0.997	1
OR10Z1	10q-Del	0.997	1
OR10Z1	Amp_6p22.3	0.997	1
PPP4R1	RBM10	0.997	1
PPP4R1	7q-Amp	0.997	1
PSMC6	TMCO4	0.997	1
SNRPB	17p-Del	0.997	1
TAF11	DNAH6	0.997	1
THRAP3	Amp_7p21.1	0.997	1
UGP2	Del_7q36.3	0.997	1
UGP2	Del_8p21.3	0.997	1
WAC	Amp_7p21.1	0.997	1
ZNF750	FUS	0.997	1
BAP1	6q-Del	0.997	1
BAP1	Del_6q27	0.997	1
BAP1	Del_13q14.2	0.997	1
DAZAP1	Del_11q23.3	0.997	1
DNAH6	SCARF2	0.997	1
EPS8	OGDH	0.997	1
FUS	Amp_11q13.3	0.997	1
GNA13	Del_11p15.5	0.997	1
SPTAN1	Del_9p23	0.997	1
TMCO4	Del_11p15.5	0.997	1
ZNF773	5p-Amp	0.997	1
19q-Amp	Amp_5p15.33	0.997	1
1q-Amp	9q-Del	0.997	1
20p-Amp	Del_16p13.3	0.997	1
20q-Amp	Amp_11q13.3	0.997	1
20q-Amp	Del_12p13.1	0.997	1
3p-Amp	Del_2q34	0.997	1
10q-Del	4p-Del	0.997	1
10q-Del	Del_2q22.1	0.997	1
10q-Del	Del_11q23.3	0.997	1
11q-Del	19p-Del	0.997	1
11q-Del	Del_18q23	0.997	1
14q-Del	18q-Del	0.997	1
14q-Del	Del_15q13.1	0.997	1
14q-Del	Del_18q23	0.997	1
15q-Del	Del_10q23.31	0.997	1
15q-Del	Del_16q23.1	0.997	1
17p-Del	Amp_3q26.33	0.997	1
17p-Del	Del_8p23.3	0.997	1
17p-Del	Del_12p13.1	0.997	1
18q-Del	Del_6q27	0.997	1
4q-Del	Del_8p23.3	0.997	1
5q-Del	Del_4q34.2	0.997	1
6q-Del	Del_11q23.3	0.997	1
8p-Del	Amp_1q21.3	0.997	1
9p-Del	Del_2q34	0.997	1
9p-Del	Del_Xp11.3	0.997	1
Amp_1q21.3	Del_17p12	0.997	1
Amp_1q23.3	Amp_6p22.3	0.997	1
Amp_1q23.3	Amp_19q13.43	0.997	1
Amp_1q23.3	Del_14q24.1	0.997	1
Amp_3p25.2	Del_1q32.1	0.997	1
Amp_3p25.2	Del_3p14.2	0.997	1
Amp_3p25.2	Del_6p25.3	0.997	1
Amp_3p25.2	Del_14q24.1	0.997	1
Amp_3q26.33	Amp_19q13.43	0.997	1
Amp_5p15.33	Amp_19q13.43	0.997	1
Amp_5p15.33	Del_16p13.3	0.997	1
Amp_6q21	Del_22q13.32	0.997	1
Amp_7p21.1	Amp_8p11.23	0.997	1
Amp_8q22.3	Amp_12q15	0.997	1
Amp_10p14	Amp_19q12	0.997	1
Amp_11q13.3	Del_Xq21.33	0.997	1
Amp_17q23.3	Amp_19q13.43	0.997	1
Amp_19q12	Del_9p23	0.997	1
Amp_19q12	Del_16p13.3	0.997	1
Amp_19q13.43	Amp_22q12.2	0.997	1
Amp_19q13.43	Del_3p14.2	0.997	1
Amp_20q11.21	Del_16p13.3	0.997	1
Amp_22q12.2	Del_8p21.3	0.997	1
Del_1p36.11	Del_3p14.2	0.997	1
Del_1p36.11	Del_5q12.1	0.997	1
Del_1q32.1	Del_12p13.1	0.997	1
Del_2q22.1	Del_12p13.1	0.997	1
Del_2q22.1	Del_16q23.1	0.997	1
Del_2q34	Del_9p23	0.997	1
Del_2q34	Del_17p12	0.997	1
Del_2q37.1	Del_12p13.1	0.997	1
Del_4q22.1	Del_13q14.2	0.997	1
Del_4q22.1	Del_16q23.1	0.997	1
Del_4q34.2	Del_19p13.3	0.997	1
Del_5q12.1	Del_18q23	0.997	1
Del_6p25.3	Del_16p13.3	0.997	1
Del_8p21.3	Del_18q23	0.997	1
Del_11q23.3	Del_12p13.1	0.997	1
Del_11q25	Del_16p13.3	0.997	1
Del_13q14.2	Del_16p13.3	0.997	1
Del_13q14.2	Del_22q13.32	0.997	1
Del_15q13.1	Del_17p12	0.997	1
Del_16q23.1	Del_22q13.32	0.997	1
Del_18q23	Del_19p13.3	0.997	1
ARID1A	NF1	0.998	1
ATM	TXNIP	0.998	1
ATM	Amp_1q21.3	0.998	1
ATM	Amp_8p11.21	0.998	1
BTG2	FBXW7	0.998	1
BTG2	MED13	0.998	1
C12orf43	FOXQ1	0.998	1
C12orf43	RPTN	0.998	1
C12orf43	THRAP3	0.998	1
C12orf43	EPS8	0.998	1
C12orf43	Amp_4q13.3	0.998	1
C3orf70	CREBBP	0.998	1
C3orf70	CASP8	0.998	1
C3orf70	IKZF2	0.998	1
C3orf70	MYO16	0.998	1
C3orf70	PARD3	0.998	1
C3orf70	UBA52	0.998	1
CDKN1A	9q-Del	0.998	1
CDKN1A	Del_11q23.3	0.998	1
CDKN2A	GTF2I	0.998	1
CFHR4	EPHA2	0.998	1
CNNM4	COPZ2	0.998	1
CNNM4	KPTN	0.998	1
CNNM4	ZNF773	0.998	1
COPZ2	PSMC6	0.998	1
COPZ2	Amp_3q26.33	0.998	1
COPZ2	Amp_19q12	0.998	1
COPZ2	Del_4q34.2	0.998	1
COPZ2	Del_10q23.31	0.998	1
CREBBP	POTEG	0.998	1
CREBBP	MARK2	0.998	1
CSMD3	CCNE2	0.998	1
CSMD3	ZNF773	0.998	1
CSMD3	19q-Amp	0.998	1
CSMD3	Amp_8p11.21	0.998	1
CTNNB1	LETMD1	0.998	1
CTNNB1	Del_16q23.1	0.998	1
EP300	CUL1	0.998	1
EP300	8p-Del	0.998	1
ERBB2	HSP90AA1	0.998	1
ERBB2	FUS	0.998	1
ERBB3	RXRA	0.998	1
ERBB3	Amp_22q12.2	0.998	1
ERCC2	CDK12	0.998	1
ERCC2	Del_15q13.1	0.998	1
FBXW7	USP28	0.998	1
FGFR3	17p-Del	0.998	1
FOXA1	19p-Del	0.998	1
FOXQ1	CCNE2	0.998	1
FOXQ1	PHLDA3	0.998	1
FOXQ1	TAF11	0.998	1
FOXQ1	Amp_3p25.2	0.998	1
GPR50	TGIF2LX	0.998	1
GPS2	STK32B	0.998	1
GPS2	Del_9p23	0.998	1
GPS2	Del_Xq21.33	0.998	1
GTF2I	UNC93B1	0.998	1
HIST1H3B	Del_4q34.2	0.998	1
HORMAD1	PSMC6	0.998	1
HORMAD1	TFG	0.998	1
HORMAD1	CNOT1	0.998	1
HORMAD1	Amp_1q23.3	0.998	1
HORMAD1	Amp_20q11.21	0.998	1
HRAS	NAA15	0.998	1
IDH1	CDK12	0.998	1
KDM6A	ITGA4	0.998	1
KDM6A	TXNIP	0.998	1
KDM6A	Del_17p12	0.998	1
KLF5	SHANK1	0.998	1
KLF5	CNOT3	0.998	1
KPTN	FAT1	0.998	1
KPTN	Del_2q34	0.998	1
KRAS	8q-Amp	0.998	1
METTL3	RUNX1	0.998	1
METTL3	AGR3	0.998	1
METTL3	Del_15q13.1	0.998	1
MIPOL1	PTTG1IP	0.998	1
MIPOL1	PSMC6	0.998	1
NF1	CDK12	0.998	1
NF1	CTCF	0.998	1
NF1	NCOA1	0.998	1
NF1	PPARG	0.998	1
NF1	CDH1	0.998	1
NF1	7q-Amp	0.998	1
NF1	Amp_8q22.3	0.998	1
NFE2L3	Del_16q23.1	0.998	1
NHLRC1	RUNX1	0.998	1
NRAS	8p-Del	0.998	1
PIGS	TMCO4	0.998	1
PIK3CA	SF3B3	0.998	1
PKHD1	HFM1	0.998	1
PKHD1	KDM5A	0.998	1
PKHD1	OGDH	0.998	1
PLCXD3	FAM47C	0.998	1
POTEG	TBC1D12	0.998	1
POTEG	CTCF	0.998	1
POTEG	MBD1	0.998	1
POTEG	USP28	0.998	1
PROS1	Del_13q14.2	0.998	1
PSIP1	AGR3	0.998	1
PSIP1	DAZAP1	0.998	1
PSIP1	Amp_4p16.3	0.998	1
PTEN	CUL1	0.998	1
PTEN	Amp_3p25.2	0.998	1
RHOA	Amp_8q22.3	0.998	1
RHOB	7p-Amp	0.998	1
RHOB	Del_12p13.1	0.998	1
RPTN	CCNE2	0.998	1
RPTN	3p-Amp	0.998	1
RPTN	Del_8p21.3	0.998	1
RUNX1	ZFP36L2	0.998	1
RXRA	Del_8p21.3	0.998	1
SARNP	CDK12	0.998	1
SARNP	Amp_7p21.1	0.998	1
SF3B1	DNAH6	0.998	1
SHANK1	IKZF2	0.998	1
SHANK1	PARD3	0.998	1
STAG2	ZNF773	0.998	1
TBC1D12	ADC	0.998	1
TGIF2LX	NDC80	0.998	1
TP53	Amp_3p25.2	0.998	1
TP53	Amp_5p15.33	0.998	1
TP53	Del_19p13.3	0.998	1
ZBTB7B	PSMC6	0.998	1
ZFP36L2	UBA52	0.998	1
ZFP36L2	WAC	0.998	1
ZFP36L2	EPS8	0.998	1
ZFP36L2	Amp_19q12	0.998	1
ZNF180	CDK12	0.998	1
ZNF180	PPARGC1A	0.998	1
ZNF180	TAF11	0.998	1
ZNF180	TXNIP	0.998	1
ZNF180	DNAH6	0.998	1
ZNF180	SCARF2	0.998	1
ZNF180	Del_4q34.2	0.998	1
ZNF486	PPARG	0.998	1
ZNF486	Amp_1q23.3	0.998	1
ZNF486	Amp_3p25.2	0.998	1
AGR3	RBM10	0.998	1
AGR3	FUT5	0.998	1
ARID2	EPS8	0.998	1
ATAD5	NCOA1	0.998	1
CCNE2	CDKN2AIPNL	0.998	1
CCNE2	MED13	0.998	1
CCNE2	RARG	0.998	1
CCNE2	THRAP3	0.998	1
CDK12	CNOT1	0.998	1
CDKN2AIPNL	IL10RB	0.998	1
CDKN2AIPNL	PHLDA3	0.998	1
CDKN2AIPNL	TAF11	0.998	1
CDKN2AIPNL	Amp_6p22.3	0.998	1
CPD	NCOA1	0.998	1
CPD	OGDH	0.998	1
CTCF	EPHA2	0.998	1
DCDC1	LETMD1	0.998	1
DDX3X	TAF11	0.998	1
DENND5B	EPHA2	0.998	1
DLX6	ADC	0.998	1
DPYS	EPHA2	0.998	1
EPHA2	17q-Amp	0.998	1
GLTP	Del_4q22.1	0.998	1
HFM1	DAZAP1	0.998	1
IKZF2	Amp_12q15	0.998	1
ITGA4	UBA52	0.998	1
ITGA4	Amp_17q12	0.998	1
LETMD1	NAA15	0.998	1
LETMD1	ZNF750	0.998	1
MED13	SNRPB	0.998	1
MED13	Del_17p12	0.998	1
MYO16	ZNF626	0.998	1
NAA15	DNAH6	0.998	1
NCOA1	RBM10	0.998	1
NCOA1	ASXL1	0.998	1
NDC80	Amp_8p11.23	0.998	1
NEK11	ZBTB47	0.998	1
OR10Z1	Del_Xp11.3	0.998	1
PPARG	FUS	0.998	1
PPARGC1A	Del_2q34	0.998	1
PSMC6	TFG	0.998	1
PSMC6	ZNF773	0.998	1
RARG	TAF11	0.998	1
RBM26	SF3B3	0.998	1
RBM26	Del_13q14.2	0.998	1
RIPK4	Amp_3p25.2	0.998	1
SF3B3	ZNF773	0.998	1
STK32B	Amp_1q21.3	0.998	1
TFG	ZNF773	0.998	1
TFG	Del_Xq21.33	0.998	1
THRAP3	Del_16q23.1	0.998	1
WAC	Del_18q23	0.998	1
ZNF626	CDH1	0.998	1
ARID1B	Amp_20q11.21	0.998	1
BAP1	Amp_3p25.2	0.998	1
BAP1	Amp_6p22.3	0.998	1
CUL1	HLA-A	0.998	1
CUL1	16p-Del	0.998	1
DAZAP1	ZNF185	0.998	1
DAZAP1	Amp_4p16.3	0.998	1
FAM47C	Del_Xq21.33	0.998	1
GNA13	Del_4q34.2	0.998	1
GNA13	Del_19p13.3	0.998	1
TMCO4	Del_11q23.3	0.998	1
TMCO4	Del_17p12	0.998	1
19q-Amp	Amp_3q26.33	0.998	1
1q-Amp	Del_16q23.1	0.998	1
20q-Amp	Del_16p13.3	0.998	1
3p-Amp	Del_2q22.1	0.998	1
5p-Amp	10q-Del	0.998	1
5p-Amp	16p-Del	0.998	1
7p-Amp	Amp_8p11.23	0.998	1
7q-Amp	Del_Xq21.33	0.998	1
8q-Amp	Amp_3p25.2	0.998	1
8q-Amp	Amp_19q13.43	0.998	1
10q-Del	Amp_20q11.21	0.998	1
11p-Del	Del_6q27	0.998	1
11q-Del	5q-Del	0.998	1
11q-Del	Del_1q32.1	0.998	1
14q-Del	Del_4q22.1	0.998	1
14q-Del	Del_5q12.1	0.998	1
14q-Del	Del_7q36.3	0.998	1
15q-Del	Amp_1p34.2	0.998	1
15q-Del	Del_4q34.2	0.998	1
15q-Del	Del_5q12.1	0.998	1
15q-Del	Del_11p15.5	0.998	1
15q-Del	Del_14q24.1	0.998	1
15q-Del	Del_Xq21.33	0.998	1
16p-Del	Del_8p21.3	0.998	1
16p-Del	Del_13q14.2	0.998	1
17p-Del	8p-Del	0.998	1
17p-Del	Del_1p36.11	0.998	1
17p-Del	Del_4q22.1	0.998	1
17p-Del	Del_6q27	0.998	1
17p-Del	Del_8p21.3	0.998	1
17p-Del	Del_18q23	0.998	1
18q-Del	Del_5q12.1	0.998	1
18q-Del	Del_15q13.1	0.998	1
19p-Del	6q-Del	0.998	1
19p-Del	Del_10q23.31	0.998	1
22q-Del	Del_16q23.1	0.998	1
4p-Del	Del_16p13.3	0.998	1
4q-Del	9q-Del	0.998	1
4q-Del	Del_3p14.2	0.998	1
4q-Del	Del_5q12.1	0.998	1
5q-Del	Del_2q34	0.998	1
6q-Del	Del_13q14.2	0.998	1
6q-Del	Del_14q24.1	0.998	1
8p-Del	Amp_13q22.1	0.998	1
8p-Del	Del_11p15.5	0.998	1
9p-Del	Del_4q34.2	0.998	1
9q-Del	Del_Xp11.3	0.998	1
Amp_1q21.3	Amp_3q26.33	0.998	1
Amp_1q21.3	Del_11p15.5	0.998	1
Amp_1q21.3	Del_16p13.3	0.998	1
Amp_1q21.3	Del_16q23.1	0.998	1
Amp_1q23.3	Del_11p15.5	0.998	1
Amp_3p25.2	Amp_16p13.2	0.998	1
Amp_3p25.2	Del_5q12.1	0.998	1
Amp_3q26.33	Del_17p12	0.998	1
Amp_4p16.3	Del_1q32.1	0.998	1
Amp_4p16.3	Del_12p13.1	0.998	1
Amp_4q13.3	Del_16p13.3	0.998	1
Amp_7p21.1	Amp_8p11.21	0.998	1
Amp_7p21.1	Amp_20q11.21	0.998	1
Amp_7p21.1	Del_10q23.31	0.998	1
Amp_8p11.21	Del_5q12.1	0.998	1
Amp_8q22.3	Amp_22q12.2	0.998	1
Amp_8q22.3	Del_1q32.1	0.998	1
Amp_10p14	Amp_19q13.43	0.998	1
Amp_13q22.1	Amp_19q12	0.998	1
Amp_19q12	Del_15q13.1	0.998	1
Amp_19q13.43	Del_6p25.3	0.998	1
Amp_19q13.43	Del_16q23.1	0.998	1
Amp_20q11.21	Del_10q23.31	0.998	1
Amp_22q12.2	Del_2q34	0.998	1
Amp_22q12.2	Del_2q37.1	0.998	1
Del_1q32.1	Del_11q23.3	0.998	1
Del_4q22.1	Del_16p13.3	0.998	1
Del_4q34.2	Del_7q36.3	0.998	1
Del_4q34.2	Del_13q14.2	0.998	1
Del_4q34.2	Del_14q24.1	0.998	1
Del_4q34.2	Del_18q23	0.998	1
Del_4q34.2	Del_Xq21.33	0.998	1
Del_5q12.1	Del_15q13.1	0.998	1
Del_9p21.3	Del_18q23	0.998	1
Del_11q23.3	Del_16p13.3	0.998	1
Del_14q24.1	Del_18q23	0.998	1
Del_18q23	Del_22q13.32	0.998	1
ARID1A	FUS	0.999	1
ASXL2	SF3B3	0.999	1
ATM	NFE2L3	0.999	1
ATM	PARD3	0.999	1
ATM	ZNF773	0.999	1
BTG2	COPZ2	0.999	1
BTG2	HORMAD1	0.999	1
BTG2	TBC1D12	0.999	1
BTG2	22q-Del	0.999	1
BTG2	Amp_1q21.3	0.999	1
C12orf43	CNNM4	0.999	1
C12orf43	ERBB2	0.999	1
C12orf43	HIST1H3B	0.999	1
C12orf43	HORMAD1	0.999	1
C12orf43	KPTN	0.999	1
C12orf43	PSMC6	0.999	1
C12orf43	TFG	0.999	1
C12orf43	ZNF773	0.999	1
C3orf70	ZBTB7B	0.999	1
C3orf70	AGR3	0.999	1
C3orf70	ZNF185	0.999	1
CDKN1A	CNOT3	0.999	1
CDKN1A	Del_9p23	0.999	1
CDKN1A	Del_11p15.5	0.999	1
CDKN2A	CFHR4	0.999	1
CDKN2A	PPARG	0.999	1
CDKN2A	CNOT1	0.999	1
CDKN2A	SCARF2	0.999	1
CFHR4	HIST1H2AG	0.999	1
CFHR4	AGR3	0.999	1
CFHR4	CCNE2	0.999	1
CFHR4	CDK12	0.999	1
CFHR4	NEK11	0.999	1
CFHR4	SLC9A4	0.999	1
CFHR4	SCARF2	0.999	1
CFHR4	Amp_11q22.2	0.999	1
CNNM4	ERCC2	0.999	1
CNNM4	POTEG	0.999	1
COPZ2	NHLRC1	0.999	1
COPZ2	SARNP	0.999	1
COPZ2	UBA52	0.999	1
COPZ2	UGP2	0.999	1
COPZ2	DAZAP1	0.999	1
COPZ2	FUS	0.999	1
COPZ2	SCARF2	0.999	1
CREBBP	CPD	0.999	1
CREBBP	SF3B3	0.999	1
CSMD3	ZBTB47	0.999	1
CTNNB1	ZNF180	0.999	1
CTNNB1	Amp_17q12	0.999	1
DIAPH2	MYO16	0.999	1
ELF3	SNRPB	0.999	1
ELF3	9q-Del	0.999	1
EP300	POTEG	0.999	1
EP300	CTCF	0.999	1
EP300	NEK11	0.999	1
EP300	Del_8p23.3	0.999	1
ERBB2	CDK12	0.999	1
ERBB2	KDM5A	0.999	1
ERBB2	GNA13	0.999	1
ERBB3	ZNF486	0.999	1
ERBB3	PPP4R1	0.999	1
ERBB3	WAC	0.999	1
ERCC2	KDM6A	0.999	1
ERCC2	NFE2L3	0.999	1
ERCC2	RUNX1	0.999	1
ERCC2	ATAD5	0.999	1
ERCC2	MBD1	0.999	1
ERCC2	RARG	0.999	1
ERCC2	THRAP3	0.999	1
ERCC2	Del_6p25.3	0.999	1
ERCC2	Del_13q14.2	0.999	1
FBXW7	Del_11q23.3	0.999	1
FGFR3	11p-Del	0.999	1
FGFR3	11q-Del	0.999	1
FOXQ1	ARID1B	0.999	1
GPS2	DENND5B	0.999	1
GTF2I	RUNX1	0.999	1
GTF2I	PPP4R1	0.999	1
GTF2I	WAC	0.999	1
GTF2I	ZNF750	0.999	1
GTF2I	FUT5	0.999	1
HIST1H3B	TBC1D12	0.999	1
HIST1H3B	14q-Del	0.999	1
HIST1H3B	8p-Del	0.999	1
HORMAD1	PSIP1	0.999	1
HORMAD1	SARNP	0.999	1
HORMAD1	ATAD5	0.999	1
HORMAD1	CCNE2	0.999	1
HORMAD1	NEK11	0.999	1
HORMAD1	UGP2	0.999	1
HORMAD1	ZBTB47	0.999	1
HRAS	MARK2	0.999	1
IDH1	OR10Z1	0.999	1
KDM6A	Del_3p14.2	0.999	1
KDM6A	Del_11q23.3	0.999	1
KLF5	RARG	0.999	1
KPTN	PIGS	0.999	1
KPTN	UBA52	0.999	1
KRAS	CTCF	0.999	1
KRAS	DAZAP1	0.999	1
METTL3	ATAD5	0.999	1
METTL3	FUT5	0.999	1
METTL3	Del_22q13.32	0.999	1
MIPOL1	NCOA1	0.999	1
MIPOL1	TRERF1	0.999	1
MIPOL1	OGDH	0.999	1
NF1	MYO16	0.999	1
NF1	UBA52	0.999	1
NF2	TGIF2LX	0.999	1
NF2	IL10RB	0.999	1
NFE2L2	UGP2	0.999	1
NFE2L2	19p-Del	0.999	1
NFE2L3	DNAH6	0.999	1
NFE2L3	EPS8	0.999	1
PIK3CA	DCDC1	0.999	1
PIK3CA	RARG	0.999	1
PKHD1	NEK11	0.999	1
PLCXD3	Del_5q12.1	0.999	1
POTEG	TFG	0.999	1
POTEG	ZNF773	0.999	1
PROS1	TGIF2LX	0.999	1
PROS1	AGR3	0.999	1
PROS1	GLTP	0.999	1
PROS1	PPARGC1A	0.999	1
PSIP1	SARNP	0.999	1
PSIP1	NEK11	0.999	1
PSIP1	PPARGC1A	0.999	1
PSIP1	9p-Del	0.999	1
PSIP1	Del_9p23	0.999	1
PTTG1IP	ZNF486	0.999	1
RHOB	TGIF2LX	0.999	1
RHOB	DENND5B	0.999	1
RHOB	Amp_1q23.3	0.999	1
RHOB	Amp_7p11.2	0.999	1
RPTN	Amp_17q12	0.999	1
RUNX1	PPP4R1	0.999	1
RXRA	RBM10	0.999	1
SARNP	CPD	0.999	1
SARNP	OR10Z1	0.999	1
SARNP	PSMC6	0.999	1
SARNP	TFG	0.999	1
SARNP	ASXL1	0.999	1
SARNP	CNOT1	0.999	1
SARNP	ZNF773	0.999	1
SF1	Amp_19q13.43	0.999	1
SF3B1	CNOT1	0.999	1
SHANK1	HFM1	0.999	1
SHANK1	TFG	0.999	1
SHANK1	GNA13	0.999	1
TBC1D12	NAA15	0.999	1
TBC1D12	NEK11	0.999	1
TBC1D12	ARID1B	0.999	1
TGIF2LX	GNA13	0.999	1
ZBTB7B	ARID2	0.999	1
ZBTB7B	SNRPB	0.999	1
ZFP36L1	MBD1	0.999	1
ZFP36L1	6q-Del	0.999	1
ZFP36L1	Del_6q27	0.999	1
ZFP36L2	CPD	0.999	1
ZFP36L2	MBD1	0.999	1
ZNF180	MBD1	0.999	1
ZNF180	PARD3	0.999	1
ZNF180	THRAP3	0.999	1
ZNF180	7p-Amp	0.999	1
ZNF180	Amp_7p21.1	0.999	1
ZNF180	Del_Xq21.33	0.999	1
ZNF486	MYO16	0.999	1
ZNF486	OR10Z1	0.999	1
ZNF486	ZNF773	0.999	1
ACTB	NCOA1	0.999	1
ACTB	RBP2	0.999	1
ACTB	USP28	0.999	1
AGR3	CASP8	0.999	1
AGR3	ITGA4	0.999	1
AGR3	SLC9A4	0.999	1
ARID2	NCOA1	0.999	1
ARID2	PHLDA3	0.999	1
ARID2	GNA13	0.999	1
ATAD5	NEK11	0.999	1
ATAD5	DNAH6	0.999	1
ATAD5	Del_13q14.2	0.999	1
ATAD5	Del_16q23.1	0.999	1
CASP8	PPARGC1A	0.999	1
CASP8	SSH3	0.999	1
CASP8	UBA52	0.999	1
CASP8	ZNF750	0.999	1
CCNE2	CTCF	0.999	1
CCNE2	TFG	0.999	1
CDK12	KDM5A	0.999	1
CDK12	SCARF2	0.999	1
CDKN2AIPNL	HSP90AA1	0.999	1
CDKN2AIPNL	MYO16	0.999	1
CPD	SSH3	0.999	1
CPD	TFG	0.999	1
CTCF	ITGA4	0.999	1
CTCF	THRAP3	0.999	1
DCDC1	RARG	0.999	1
DDX3X	MBD1	0.999	1
DPYS	ITGA4	0.999	1
EPHA2	KDM5A	0.999	1
EPHA2	Amp_22q12.2	0.999	1
EXOSC10	Del_17p12	0.999	1
FAT1	FUT5	0.999	1
GLTP	Del_2q34	0.999	1
GLTP	Del_17p12	0.999	1
HFM1	ZNF773	0.999	1
HFM1	Del_5q12.1	0.999	1
HSP90AA1	TFG	0.999	1
HSP90AA1	THRAP3	0.999	1
HSP90AA1	EPS8	0.999	1
HSP90AA1	Amp_8p11.21	0.999	1
HSP90AA1	Del_2q37.1	0.999	1
IKZF2	PPP4R1	0.999	1
IKZF2	SSH3	0.999	1
IL10RB	Amp_1q21.3	0.999	1
IL10RB	Amp_3p25.2	0.999	1
ITGA4	RBP2	0.999	1
LETMD1	MARK2	0.999	1
LETMD1	CNOT3	0.999	1
LETMD1	Amp_1q21.3	0.999	1
LETMD1	Amp_3p25.2	0.999	1
LETMD1	Amp_6q21	0.999	1
MARK2	Del_22q13.32	0.999	1
MED13	ZNF773	0.999	1
MYO16	THRAP3	0.999	1
NAA15	Amp_4q13.3	0.999	1
NAA15	Del_Xq21.33	0.999	1
NCOA1	ZNF773	0.999	1
NDC80	THRAP3	0.999	1
NEK11	TMCO4	0.999	1
NEK11	Amp_20q11.21	0.999	1
OR10Z1	7p-Amp	0.999	1
OR10Z1	Amp_6q21	0.999	1
PARD3	SCARF2	0.999	1
PHLDA3	PPP4R1	0.999	1
PHLDA3	CNOT3	0.999	1
PPARGC1A	Del_13q14.2	0.999	1
PPP4R1	Amp_6p22.3	0.999	1
PSMC6	DNAH6	0.999	1
PSMC6	OGDH	0.999	1
RARG	ZBTB47	0.999	1
RBP2	CUL1	0.999	1
SLC9A4	ASXL1	0.999	1
SLC9A4	6q-Del	0.999	1
SSH3	ADC	0.999	1
TAF11	ARID1B	0.999	1
TFG	CNOT1	0.999	1
THRAP3	TXNIP	0.999	1
THRAP3	EPS8	0.999	1
UBA52	EPS8	0.999	1
UBA52	GNA13	0.999	1
UGP2	ZNF773	0.999	1
USP28	Amp_1q21.3	0.999	1
WAC	4p-Del	0.999	1
WAC	Del_10q23.31	0.999	1
ZNF750	HLA-A	0.999	1
ADC	Amp_3p25.2	0.999	1
ARID1B	3q-Amp	0.999	1
BAP1	1q-Amp	0.999	1
CDH1	4p-Del	0.999	1
CDH1	4q-Del	0.999	1
CDH1	Del_4q34.2	0.999	1
CNOT1	DNAH6	0.999	1
CNOT3	FUS	0.999	1
CUL1	DAZAP1	0.999	1
DNAH6	EPS8	0.999	1
DNAH6	1q-Amp	0.999	1
DNAH6	Del_15q13.1	0.999	1
FUT5	OGDH	0.999	1
FUT5	ZNF185	0.999	1
HLA-A	Del_Xp11.3	0.999	1
SPTAN1	Del_9p21.3	0.999	1
TMCO4	UNC93B1	0.999	1
TMCO4	10q-Del	0.999	1
TMCO4	11p-Del	0.999	1
TMCO4	17p-Del	0.999	1
TMCO4	Del_5q12.1	0.999	1
17q-Amp	Amp_19q12	0.999	1
19q-Amp	Amp_10p14	0.999	1
19q-Amp	Del_19p13.3	0.999	1
1q-Amp	Amp_4q13.3	0.999	1
20p-Amp	17p-Del	0.999	1
20p-Amp	Del_17p12	0.999	1
20q-Amp	8q-Amp	0.999	1
20q-Amp	9q-Del	0.999	1
20q-Amp	Del_10q23.31	0.999	1
3p-Amp	Del_6p25.3	0.999	1
8q-Amp	Del_3p14.2	0.999	1
8q-Amp	Del_6p25.3	0.999	1
10q-Del	11p-Del	0.999	1
11p-Del	Amp_11q13.3	0.999	1
11p-Del	Del_2q37.1	0.999	1
11p-Del	Del_19p13.3	0.999	1
11p-Del	Del_Xq21.33	0.999	1
11q-Del	14q-Del	0.999	1
11q-Del	Amp_4p16.3	0.999	1
11q-Del	Amp_11q13.3	0.999	1
14q-Del	6q-Del	0.999	1
14q-Del	9p-Del	0.999	1
14q-Del	Del_10q23.31	0.999	1
14q-Del	Del_19p13.3	0.999	1
15q-Del	Amp_19q12	0.999	1
15q-Del	Del_8p21.3	0.999	1
16p-Del	4p-Del	0.999	1
16p-Del	Del_6q27	0.999	1
17p-Del	18q-Del	0.999	1
17p-Del	22q-Del	0.999	1
17p-Del	Del_2q37.1	0.999	1
17p-Del	Del_10q23.31	0.999	1
17p-Del	Del_11q25	0.999	1
18q-Del	Del_6p25.3	0.999	1
18q-Del	Del_9p21.3	0.999	1
18q-Del	Del_19p13.3	0.999	1
19p-Del	Del_3p14.2	0.999	1
19p-Del	Del_6q27	0.999	1
19p-Del	Del_8p21.3	0.999	1
22q-Del	4p-Del	0.999	1
22q-Del	8p-Del	0.999	1
22q-Del	Amp_20q11.21	0.999	1
22q-Del	Del_3p14.2	0.999	1
22q-Del	Del_18q23	0.999	1
4p-Del	9p-Del	0.999	1
4p-Del	Del_8p21.3	0.999	1
4p-Del	Del_18q23	0.999	1
4p-Del	Del_22q13.32	0.999	1
4q-Del	Del_1p36.11	0.999	1
4q-Del	Del_15q13.1	0.999	1
4q-Del	Del_18q23	0.999	1
5q-Del	Amp_5p15.33	0.999	1
5q-Del	Del_10q23.31	0.999	1
6q-Del	9p-Del	0.999	1
6q-Del	Del_16q23.1	0.999	1
6q-Del	Del_18q23	0.999	1
8p-Del	Amp_6p22.3	0.999	1
8p-Del	Amp_19q13.43	0.999	1
8p-Del	Del_4q34.2	0.999	1
8p-Del	Del_10q23.31	0.999	1
8p-Del	Del_14q24.1	0.999	1
8p-Del	Del_17p12	0.999	1
9p-Del	Del_1p36.11	0.999	1
9p-Del	Del_14q24.1	0.999	1
9p-Del	Del_18q23	0.999	1
9q-Del	Amp_20q11.21	0.999	1
9q-Del	Del_18q23	0.999	1
Amp_1p34.2	Amp_6q21	0.999	1
Amp_1q21.3	Del_13q14.2	0.999	1
Amp_1q21.3	Del_15q13.1	0.999	1
Amp_1q23.3	Del_1q32.1	0.999	1
Amp_3p25.2	Amp_4q13.3	0.999	1
Amp_3p25.2	Amp_6q21	0.999	1
Amp_3p25.2	Amp_17q12	0.999	1
Amp_3p25.2	Del_4q34.2	0.999	1
Amp_3p25.2	Del_16q23.1	0.999	1
Amp_3p25.2	Del_22q13.32	0.999	1
Amp_3q26.33	Amp_10p14	0.999	1
Amp_3q26.33	Amp_19q12	0.999	1
Amp_4p16.3	Del_11q23.3	0.999	1
Amp_4p16.3	Del_14q24.1	0.999	1
Amp_4q13.3	Del_13q14.2	0.999	1
Amp_5p15.33	Amp_7p11.2	0.999	1
Amp_5p15.33	Amp_16p13.2	0.999	1
Amp_5p15.33	Del_8p21.3	0.999	1
Amp_6p22.3	Amp_7p11.2	0.999	1
Amp_6p22.3	Amp_22q12.2	0.999	1
Amp_7p21.1	Amp_22q12.2	0.999	1
Amp_8p11.21	Amp_13q22.1	0.999	1
Amp_8q22.3	Del_6p25.3	0.999	1
Amp_8q22.3	Del_15q13.1	0.999	1
Amp_8q22.3	Del_16p13.3	0.999	1
Amp_10p14	Del_10q23.31	0.999	1
Amp_11q13.3	Del_9p23	0.999	1
Amp_12q15	Amp_22q12.2	0.999	1
Amp_13q22.1	Del_8p21.3	0.999	1
Amp_16p13.2	Del_6p25.3	0.999	1
Amp_16p13.2	Del_8p23.3	0.999	1
Amp_17q12	Del_17p12	0.999	1
Amp_17q23.3	Del_3p14.2	0.999	1
Amp_19q12	Del_8p23.3	0.999	1
Amp_19q12	Del_11p15.5	0.999	1
Amp_19q13.43	Amp_20q11.21	0.999	1
Amp_19q13.43	Del_15q13.1	0.999	1
Amp_20q11.21	Del_5q12.1	0.999	1
Amp_20q11.21	Del_12p13.1	0.999	1
Amp_22q12.2	Del_6p25.3	0.999	1
Amp_22q12.2	Del_6q27	0.999	1
Amp_22q12.2	Del_16q23.1	0.999	1
Del_1p36.11	Del_4q22.1	0.999	1
Del_1q32.1	Del_3p14.2	0.999	1
Del_2q22.1	Del_6p25.3	0.999	1
Del_2q22.1	Del_16p13.3	0.999	1
Del_2q22.1	Del_Xq21.33	0.999	1
Del_2q34	Del_3p14.2	0.999	1
Del_2q34	Del_4q22.1	0.999	1
Del_2q34	Del_7q36.3	0.999	1
Del_2q37.1	Del_4q22.1	0.999	1
Del_2q37.1	Del_11q23.3	0.999	1
Del_2q37.1	Del_15q13.1	0.999	1
Del_2q37.1	Del_18q23	0.999	1
Del_3p14.2	Del_9p21.3	0.999	1
Del_3p14.2	Del_11q25	0.999	1
Del_3p14.2	Del_13q14.2	0.999	1
Del_3p14.2	Del_18q23	0.999	1
Del_4q22.1	Del_17p12	0.999	1
Del_4q34.2	Del_11p15.5	0.999	1
Del_4q34.2	Del_16p13.3	0.999	1
Del_4q34.2	Del_16q23.1	0.999	1
Del_6p25.3	Del_12p13.1	0.999	1
Del_6p25.3	Del_22q13.32	0.999	1
Del_6q27	Del_11q23.3	0.999	1
Del_6q27	Del_11q25	0.999	1
Del_10q23.31	Del_17p12	0.999	1
Del_11p15.5	Del_15q13.1	0.999	1
Del_11p15.5	Del_19p13.3	0.999	1
Del_13q14.2	Del_15q13.1	0.999	1
Del_13q14.2	Del_18q23	0.999	1
Del_14q24.1	Del_19p13.3	0.999	1
Del_15q13.1	Del_18q23	0.999	1
Del_15q13.1	Del_19p13.3	0.999	1
Del_17p12	Del_18q23	0.999	1
ARID1A	CNNM4	1	1
ARID1A	RBP2	1	1
ARID1A	ZNF626	1	1
ATM	CSMD3	1	1
ATM	NCOA1	1	1
BTG2	CDKN2A	1	1
BTG2	PTEN	1	1
BTG2	SHANK1	1	1
BTG2	NAA15	1	1
BTG2	UGP2	1	1
C12orf43	ERCC2	1	1
C12orf43	PIGS	1	1
C12orf43	SARNP	1	1
C12orf43	CCNE2	1	1
C12orf43	ASXL1	1	1
C3orf70	ERBB2	1	1
C3orf70	FBXW7	1	1
C3orf70	TGIF2LX	1	1
C3orf70	MED13	1	1
C3orf70	GNA13	1	1
CDKN1A	11p-Del	1	1
CDKN2A	COPZ2	1	1
CDKN2A	RIPK4	1	1
CDKN2A	UBA52	1	1
CFHR4	RBM26	1	1
CNNM4	Del_1q32.1	1	1
COPZ2	HORMAD1	1	1
COPZ2	TP53	1	1
COPZ2	CDK12	1	1
COPZ2	CNOT1	1	1
COPZ2	Del_6q27	1	1
CSMD3	PARD3	1	1
CTNNB1	17q-Amp	1	1
CTNNB1	7q-Amp	1	1
DIAPH2	KPTN	1	1
DIAPH2	GLTP	1	1
ELF3	ZBTB47	1	1
EP300	GPR50	1	1
ERBB3	TGIF2LX	1	1
ERCC2	LETMD1	1	1
ERCC2	NAA15	1	1
ERCC2	Amp_3p25.2	1	1
ERCC2	Del_16q23.1	1	1
FBXW7	AGR3	1	1
FBXW7	MED13	1	1
FGFR3	KDM6A	1	1
FGFR3	STAG2	1	1
FGFR3	9p-Del	1	1
FGFR3	9q-Del	1	1
FGFR3	Del_9p23	1	1
FGFR3	Del_9p21.3	1	1
FGFR3	Del_11q23.3	1	1
FOXQ1	17q-Amp	1	1
GPR50	NF2	1	1
GPR50	RBM26	1	1
GPS2	GTF2I	1	1
GPS2	ITGA4	1	1
GTF2I	OGDH	1	1
HIST1H2AG	SARNP	1	1
HIST1H3B	MBD1	1	1
HORMAD1	PIGS	1	1
HORMAD1	ZNF185	1	1
HORMAD1	Amp_1q21.3	1	1
IDH1	ATAD5	1	1
IDH1	NAA15	1	1
IDH1	WAC	1	1
IDH1	DNAH6	1	1
IDH1	OGDH	1	1
KDM6A	STAG2	1	1
KDM6A	TBC1D12	1	1
KDM6A	ZNF486	1	1
KDM6A	DPYS	1	1
KDM6A	LETMD1	1	1
KLF5	FUS	1	1
KLF5	OGDH	1	1
KPTN	PKHD1	1	1
KPTN	16p-Del	1	1
METTL3	PIK3CA	1	1
METTL3	PROS1	1	1
METTL3	16p-Del	1	1
MIPOL1	RPTN	1	1
MIPOL1	DNAH6	1	1
MIPOL1	ZNF773	1	1
NF1	PIGS	1	1
NF1	PSIP1	1	1
NF1	SARNP	1	1
NF1	THRAP3	1	1
NF2	SARNP	1	1
NFE2L2	Del_9p21.3	1	1
NFE2L3	POTEG	1	1
NFE2L3	NCOA1	1	1
NFE2L3	THRAP3	1	1
NFE2L3	Amp_3p25.2	1	1
NFE2L3	Del_Xq21.33	1	1
PIGS	PIK3CA	1	1
PIGS	ZFP36L2	1	1
PIGS	CCNE2	1	1
PIGS	EPHA2	1	1
PIGS	PPARGC1A	1	1
PIGS	PSMC6	1	1
PIGS	TFG	1	1
PKHD1	ZFP36L1	1	1
PKHD1	ARID1B	1	1
PLCXD3	CCNE2	1	1
PLCXD3	CNOT3	1	1
PLCXD3	ZNF773	1	1
PLCXD3	5p-Amp	1	1
PLCXD3	Amp_5p15.33	1	1
PSIP1	CPD	1	1
PSIP1	MED13	1	1
PSIP1	NCOA1	1	1
PSIP1	SSH3	1	1
PSIP1	TMCO4	1	1
PSIP1	9q-Del	1	1
RB1	TP53	1	1
RB1	5p-Amp	1	1
RB1	10q-Del	1	1
RB1	Amp_5p15.33	1	1
RB1	Amp_16p13.2	1	1
RB1	Del_10q23.31	1	1
RB1	Del_13q14.2	1	1
RB1	Del_16p13.3	1	1
RPTN	ZNF773	1	1
RPTN	Amp_13q22.1	1	1
RUNX1	SF1	1	1
RUNX1	Amp_1q21.3	1	1
RUNX1	Amp_6p22.3	1	1
RXRA	DENND5B	1	1
RXRA	EPHA2	1	1
SARNP	NCOA1	1	1
SARNP	Amp_19q12	1	1
SHANK1	THRAP3	1	1
SHANK1	Del_6p25.3	1	1
STAG2	CPD	1	1
STAG2	TMCO4	1	1
TBC1D12	MED13	1	1
TBC1D12	NCOA1	1	1
TGIF2LX	SF3B3	1	1
TGIF2LX	UBA52	1	1
TP53	ZNF626	1	1
TP53	UNC93B1	1	1
TP53	5p-Amp	1	1
TP53	Amp_6p22.3	1	1
TP53	Amp_10p14	1	1
TP53	Amp_16p13.2	1	1
TP53	Del_4q22.1	1	1
TP53	Del_4q34.2	1	1
TSC1	GNA13	1	1
TSC1	SPTAN1	1	1
ZFP36L1	UBA52	1	1
ZFP36L2	HSP90AA1	1	1
ZFP36L2	TRERF1	1	1
ZNF180	ZNF511	1	1
ZNF180	PSMC6	1	1
ZNF180	TFG	1	1
ZNF486	LETMD1	1	1
ZNF486	Amp_1q21.3	1	1
ZNF511	PARD3	1	1
ACTB	CUL1	1	1
AGR3	CDK12	1	1
AGR3	MED13	1	1
AGR3	RBM26	1	1
AGR3	SSH3	1	1
AGR3	TFG	1	1
AGR3	ADC	1	1
ATAD5	CDK12	1	1
ATAD5	RARG	1	1
CASP8	NCOA1	1	1
CCNE2	PSMC6	1	1
CCNE2	TAF11	1	1
CCNE2	ASXL1	1	1
CCNE2	ZNF773	1	1
CDK12	MED13	1	1
CDK12	TFG	1	1
CPD	RBM26	1	1
CPD	SF3B3	1	1
CPD	Amp_1p34.2	1	1
CTCF	PPARG	1	1
CTCF	TFG	1	1
CTCF	ASXL1	1	1
DCDC1	Del_3p14.2	1	1
DCDC1	Del_13q14.2	1	1
DLX6	IL10RB	1	1
DPYS	NDC80	1	1
FAT1	UBA52	1	1
HFM1	NEK11	1	1
HFM1	SLC9A4	1	1
HFM1	ARID1B	1	1
HSP90AA1	ITGA4	1	1
IL10RB	RARG	1	1
IL10RB	TAF11	1	1
ITGA4	ARID1B	1	1
ITGA4	Amp_3p25.2	1	1
KDM5A	Amp_13q22.1	1	1
LETMD1	7q-Amp	1	1
MBD1	TRERF1	1	1
MED13	NCOA1	1	1
MYO16	PARD3	1	1
NCOA1	NEK11	1	1
NCOA1	PPARGC1A	1	1
NCOA1	UGP2	1	1
NCOA1	ZBTB47	1	1
NCOA1	ARID1B	1	1
NCOA1	19p-Del	1	1
NCOA1	Amp_1p34.2	1	1
NDC80	CNOT3	1	1
NEK11	TFG	1	1
NEK11	ARID1B	1	1
NKX2-2	RBP2	1	1
OR10Z1	Amp_16p13.2	1	1
OR10Z1	Del_10q23.31	1	1
PARD3	SNRPB	1	1
PPARGC1A	ARID1B	1	1
PPP4R1	Del_4q22.1	1	1
PSMC6	RARG	1	1
PSMC6	EPS8	1	1
RARG	CNOT1	1	1
RARG	Del_6p25.3	1	1
RBM26	ASXL1	1	1
RBP2	ZNF750	1	1
RBP2	FUS	1	1
SLC9A4	Del_3p14.2	1	1
SNRPB	Del_13q14.2	1	1
SSH3	Del_11p15.5	1	1
TAF11	ZBTB47	1	1
TFG	THRAP3	1	1
UBA52	CNOT1	1	1
UGP2	19q-Amp	1	1
FUT5	Amp_1q21.3	1	1
TMCO4	8p-Del	1	1
TMCO4	Amp_11q13.3	1	1
TMCO4	Del_14q24.1	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q23.3	1	1
17q-Amp	Amp_19q13.43	1	1
17q-Amp	Amp_22q12.2	1	1
19q-Amp	Amp_19q12	1	1
19q-Amp	Amp_19q13.43	1	1
1q-Amp	Amp_1q21.3	1	1
1q-Amp	Amp_1q23.3	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	10q-Del	1	1
20p-Amp	Amp_20q11.21	1	1
20q-Amp	7p-Amp	1	1
20q-Amp	10q-Del	1	1
20q-Amp	17p-Del	1	1
20q-Amp	Amp_20q11.21	1	1
20q-Amp	Del_17p12	1	1
3p-Amp	3q-Amp	1	1
3p-Amp	Amp_3p25.2	1	1
3p-Amp	Amp_3q26.33	1	1
3q-Amp	Amp_3q26.33	1	1
3q-Amp	Del_6p25.3	1	1
5p-Amp	Amp_5p15.33	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_7p21.1	1	1
7p-Amp	Amp_7p11.2	1	1
7p-Amp	Amp_20q11.21	1	1
7q-Amp	Amp_7p21.1	1	1
7q-Amp	Amp_7p11.2	1	1
7q-Amp	Amp_20q11.21	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8p11.21	1	1
8q-Amp	Amp_8q22.3	1	1
10q-Del	11q-Del	1	1
10q-Del	15q-Del	1	1
10q-Del	16p-Del	1	1
10q-Del	18q-Del	1	1
10q-Del	19p-Del	1	1
10q-Del	22q-Del	1	1
10q-Del	5q-Del	1	1
10q-Del	6q-Del	1	1
10q-Del	8p-Del	1	1
10q-Del	Amp_5p15.33	1	1
10q-Del	Del_2q34	1	1
10q-Del	Del_2q37.1	1	1
10q-Del	Del_6q27	1	1
10q-Del	Del_8p23.3	1	1
10q-Del	Del_8p21.3	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_13q14.2	1	1
10q-Del	Del_15q13.1	1	1
10q-Del	Del_16p13.3	1	1
10q-Del	Del_16q23.1	1	1
10q-Del	Del_22q13.32	1	1
11p-Del	11q-Del	1	1
11p-Del	14q-Del	1	1
11p-Del	17p-Del	1	1
11p-Del	18q-Del	1	1
11p-Del	4p-Del	1	1
11p-Del	5q-Del	1	1
11p-Del	6q-Del	1	1
11p-Del	9p-Del	1	1
11p-Del	9q-Del	1	1
11p-Del	Amp_4p16.3	1	1
11p-Del	Del_3p14.2	1	1
11p-Del	Del_5q12.1	1	1
11p-Del	Del_9p23	1	1
11p-Del	Del_9p21.3	1	1
11p-Del	Del_11p15.5	1	1
11p-Del	Del_11q23.3	1	1
11p-Del	Del_11q25	1	1
11p-Del	Del_14q24.1	1	1
11p-Del	Del_17p12	1	1
11p-Del	Del_18q23	1	1
11q-Del	17p-Del	1	1
11q-Del	18q-Del	1	1
11q-Del	6q-Del	1	1
11q-Del	9p-Del	1	1
11q-Del	9q-Del	1	1
11q-Del	Del_2q37.1	1	1
11q-Del	Del_3p14.2	1	1
11q-Del	Del_9p23	1	1
11q-Del	Del_9p21.3	1	1
11q-Del	Del_11p15.5	1	1
11q-Del	Del_11q23.3	1	1
11q-Del	Del_11q25	1	1
11q-Del	Del_17p12	1	1
14q-Del	15q-Del	1	1
14q-Del	17p-Del	1	1
14q-Del	22q-Del	1	1
14q-Del	4p-Del	1	1
14q-Del	4q-Del	1	1
14q-Del	5q-Del	1	1
14q-Del	8p-Del	1	1
14q-Del	Amp_4p16.3	1	1
14q-Del	Del_2q37.1	1	1
14q-Del	Del_4q34.2	1	1
14q-Del	Del_6q27	1	1
14q-Del	Del_8p23.3	1	1
14q-Del	Del_8p21.3	1	1
14q-Del	Del_11p15.5	1	1
14q-Del	Del_14q24.1	1	1
14q-Del	Del_17p12	1	1
14q-Del	Del_22q13.32	1	1
15q-Del	16p-Del	1	1
15q-Del	17p-Del	1	1
15q-Del	18q-Del	1	1
15q-Del	22q-Del	1	1
15q-Del	4p-Del	1	1
15q-Del	4q-Del	1	1
15q-Del	5q-Del	1	1
15q-Del	6q-Del	1	1
15q-Del	8p-Del	1	1
15q-Del	Del_3p14.2	1	1
15q-Del	Del_8p23.3	1	1
15q-Del	Del_15q13.1	1	1
15q-Del	Del_16p13.3	1	1
15q-Del	Del_22q13.32	1	1
16p-Del	18q-Del	1	1
16p-Del	22q-Del	1	1
16p-Del	5q-Del	1	1
16p-Del	6q-Del	1	1
16p-Del	8p-Del	1	1
16p-Del	Del_2q22.1	1	1
16p-Del	Del_2q34	1	1
16p-Del	Del_2q37.1	1	1
16p-Del	Del_8p23.3	1	1
16p-Del	Del_10q23.31	1	1
16p-Del	Del_16p13.3	1	1
16p-Del	Del_16q23.1	1	1
16p-Del	Del_22q13.32	1	1
17p-Del	4p-Del	1	1
17p-Del	4q-Del	1	1
17p-Del	5q-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	9p-Del	1	1
17p-Del	9q-Del	1	1
17p-Del	Amp_20q11.21	1	1
17p-Del	Del_3p14.2	1	1
17p-Del	Del_4q34.2	1	1
17p-Del	Del_5q12.1	1	1
17p-Del	Del_9p23	1	1
17p-Del	Del_9p21.3	1	1
17p-Del	Del_11p15.5	1	1
17p-Del	Del_11q23.3	1	1
17p-Del	Del_14q24.1	1	1
17p-Del	Del_17p12	1	1
17p-Del	Del_19p13.3	1	1
18q-Del	22q-Del	1	1
18q-Del	4p-Del	1	1
18q-Del	4q-Del	1	1
18q-Del	5q-Del	1	1
18q-Del	6q-Del	1	1
18q-Del	8p-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	9q-Del	1	1
18q-Del	Del_2q37.1	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_11p15.5	1	1
18q-Del	Del_18q23	1	1
18q-Del	Del_22q13.32	1	1
19p-Del	5q-Del	1	1
19p-Del	8p-Del	1	1
19p-Del	Del_19p13.3	1	1
19p-Del	Del_22q13.32	1	1
22q-Del	5q-Del	1	1
22q-Del	6q-Del	1	1
22q-Del	Del_2q22.1	1	1
22q-Del	Del_2q34	1	1
22q-Del	Del_2q37.1	1	1
22q-Del	Del_5q12.1	1	1
22q-Del	Del_6q27	1	1
22q-Del	Del_8p23.3	1	1
22q-Del	Del_8p21.3	1	1
22q-Del	Del_10q23.31	1	1
22q-Del	Del_13q14.2	1	1
22q-Del	Del_14q24.1	1	1
22q-Del	Del_15q13.1	1	1
22q-Del	Del_16p13.3	1	1
22q-Del	Del_17p12	1	1
22q-Del	Del_19p13.3	1	1
22q-Del	Del_22q13.32	1	1
4p-Del	4q-Del	1	1
4p-Del	5q-Del	1	1
4p-Del	6q-Del	1	1
4p-Del	8p-Del	1	1
4p-Del	Del_4q22.1	1	1
4p-Del	Del_4q34.2	1	1
4p-Del	Del_5q12.1	1	1
4p-Del	Del_6q27	1	1
4p-Del	Del_8p23.3	1	1
4p-Del	Del_13q14.2	1	1
4p-Del	Del_17p12	1	1
4q-Del	5q-Del	1	1
4q-Del	6q-Del	1	1
4q-Del	8p-Del	1	1
4q-Del	9p-Del	1	1
4q-Del	Del_4q22.1	1	1
4q-Del	Del_4q34.2	1	1
4q-Del	Del_17p12	1	1
5q-Del	6q-Del	1	1
5q-Del	8p-Del	1	1
5q-Del	9p-Del	1	1
5q-Del	9q-Del	1	1
5q-Del	Amp_8p11.23	1	1
5q-Del	Del_3p14.2	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_6q27	1	1
5q-Del	Del_8p23.3	1	1
5q-Del	Del_8p21.3	1	1
5q-Del	Del_9p23	1	1
5q-Del	Del_11p15.5	1	1
5q-Del	Del_14q24.1	1	1
5q-Del	Del_15q13.1	1	1
5q-Del	Del_17p12	1	1
5q-Del	Del_18q23	1	1
5q-Del	Del_19p13.3	1	1
5q-Del	Del_22q13.32	1	1
6q-Del	8p-Del	1	1
6q-Del	Del_2q34	1	1
6q-Del	Del_2q37.1	1	1
6q-Del	Del_3p14.2	1	1
6q-Del	Del_4q22.1	1	1
6q-Del	Del_4q34.2	1	1
6q-Del	Del_5q12.1	1	1
6q-Del	Del_6p25.3	1	1
6q-Del	Del_6q27	1	1
6q-Del	Del_8p23.3	1	1
6q-Del	Del_8p21.3	1	1
6q-Del	Del_11q25	1	1
6q-Del	Del_15q13.1	1	1
6q-Del	Del_16p13.3	1	1
6q-Del	Del_17p12	1	1
6q-Del	Del_19p13.3	1	1
6q-Del	Del_22q13.32	1	1
8p-Del	Amp_5p15.33	1	1
8p-Del	Del_2q34	1	1
8p-Del	Del_2q37.1	1	1
8p-Del	Del_5q12.1	1	1
8p-Del	Del_6q27	1	1
8p-Del	Del_7q36.3	1	1
8p-Del	Del_8p23.3	1	1
8p-Del	Del_8p21.3	1	1
8p-Del	Del_15q13.1	1	1
8p-Del	Del_16p13.3	1	1
8p-Del	Del_19p13.3	1	1
8p-Del	Del_22q13.32	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_4p16.3	1	1
9p-Del	Del_2q37.1	1	1
9p-Del	Del_3p14.2	1	1
9p-Del	Del_5q12.1	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_11p15.5	1	1
9p-Del	Del_11q23.3	1	1
9p-Del	Del_11q25	1	1
9p-Del	Del_17p12	1	1
9q-Del	Amp_4p16.3	1	1
9q-Del	Del_2q37.1	1	1
9q-Del	Del_5q12.1	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_11p15.5	1	1
9q-Del	Del_11q23.3	1	1
9q-Del	Del_11q25	1	1
9q-Del	Del_17p12	1	1
Amp_1p34.2	Amp_4q13.3	1	1
Amp_1q21.3	Amp_1q23.3	1	1
Amp_1q21.3	Amp_3p25.2	1	1
Amp_1q21.3	Amp_16p13.2	1	1
Amp_1q21.3	Amp_19q12	1	1
Amp_1q21.3	Del_8p23.3	1	1
Amp_1q21.3	Del_8p21.3	1	1
Amp_1q21.3	Del_10q23.31	1	1
Amp_1q23.3	Amp_3p25.2	1	1
Amp_1q23.3	Amp_8q22.3	1	1
Amp_1q23.3	Amp_19q12	1	1
Amp_1q23.3	Amp_20q11.21	1	1
Amp_1q23.3	Amp_22q12.2	1	1
Amp_1q23.3	Del_8p23.3	1	1
Amp_3p25.2	Amp_6p22.3	1	1
Amp_3p25.2	Amp_7p21.1	1	1
Amp_3p25.2	Amp_8p11.21	1	1
Amp_3p25.2	Amp_8q22.3	1	1
Amp_3p25.2	Amp_19q12	1	1
Amp_3p25.2	Amp_22q12.2	1	1
Amp_3p25.2	Del_17p12	1	1
Amp_3q26.33	Del_3p14.2	1	1
Amp_3q26.33	Del_6p25.3	1	1
Amp_3q26.33	Del_19p13.3	1	1
Amp_4p16.3	Del_9p23	1	1
Amp_4p16.3	Del_9p21.3	1	1
Amp_4p16.3	Del_11p15.5	1	1
Amp_4p16.3	Del_17p12	1	1
Amp_5p15.33	Del_5q12.1	1	1
Amp_5p15.33	Del_8p23.3	1	1
Amp_5p15.33	Del_16q23.1	1	1
Amp_6p22.3	Amp_7p21.1	1	1
Amp_6p22.3	Amp_8p11.21	1	1
Amp_6p22.3	Amp_8q22.3	1	1
Amp_6p22.3	Amp_10p14	1	1
Amp_6p22.3	Amp_19q12	1	1
Amp_6p22.3	Amp_19q13.43	1	1
Amp_6p22.3	Del_6p25.3	1	1
Amp_6p22.3	Del_8p23.3	1	1
Amp_6p22.3	Del_8p21.3	1	1
Amp_6p22.3	Del_13q14.2	1	1
Amp_7p21.1	Amp_7p11.2	1	1
Amp_7p21.1	Amp_8q22.3	1	1
Amp_7p21.1	Amp_19q12	1	1
Amp_8p11.23	Amp_8p11.21	1	1
Amp_8p11.23	Amp_8q22.3	1	1
Amp_8p11.23	Del_5q12.1	1	1
Amp_8p11.23	Del_8p21.3	1	1
Amp_8p11.21	Amp_8q22.3	1	1
Amp_8p11.21	Amp_19q12	1	1
Amp_8p11.21	Amp_19q13.43	1	1
Amp_8p11.21	Amp_22q12.2	1	1
Amp_8p11.21	Del_8p23.3	1	1
Amp_8p11.21	Del_8p21.3	1	1
Amp_8q22.3	Amp_10p14	1	1
Amp_8q22.3	Amp_19q12	1	1
Amp_8q22.3	Amp_19q13.43	1	1
Amp_8q22.3	Del_7q36.3	1	1
Amp_8q22.3	Del_8p23.3	1	1
Amp_8q22.3	Del_8p21.3	1	1
Amp_10p14	Amp_16p13.2	1	1
Amp_11q13.3	Amp_11q22.2	1	1
Amp_11q13.3	Del_11q23.3	1	1
Amp_11q13.3	Del_11q25	1	1
Amp_13q22.1	Del_8p23.3	1	1
Amp_16p13.2	Del_10q23.31	1	1
Amp_16p13.2	Del_16p13.3	1	1
Amp_17q12	Amp_17q23.3	1	1
Amp_19q12	Amp_19q13.43	1	1
Amp_19q12	Amp_22q12.2	1	1
Amp_19q12	Del_8p21.3	1	1
Amp_19q12	Del_14q24.1	1	1
Amp_20q11.21	Del_17p12	1	1
Amp_22q12.2	Del_8p23.3	1	1
Amp_22q12.2	Del_14q24.1	1	1
Amp_22q12.2	Del_16p13.3	1	1
Amp_22q12.2	Del_22q13.32	1	1
Del_1p36.11	Del_9p21.3	1	1
Del_2q22.1	Del_2q34	1	1
Del_2q22.1	Del_2q37.1	1	1
Del_2q22.1	Del_10q23.31	1	1
Del_2q34	Del_2q37.1	1	1
Del_2q34	Del_4q34.2	1	1
Del_2q34	Del_5q12.1	1	1
Del_2q34	Del_6p25.3	1	1
Del_2q34	Del_6q27	1	1
Del_2q34	Del_8p23.3	1	1
Del_2q34	Del_8p21.3	1	1
Del_2q34	Del_10q23.31	1	1
Del_2q34	Del_11p15.5	1	1
Del_2q34	Del_13q14.2	1	1
Del_2q34	Del_16p13.3	1	1
Del_2q34	Del_16q23.1	1	1
Del_2q37.1	Del_3p14.2	1	1
Del_2q37.1	Del_4q34.2	1	1
Del_2q37.1	Del_5q12.1	1	1
Del_2q37.1	Del_6p25.3	1	1
Del_2q37.1	Del_6q27	1	1
Del_2q37.1	Del_7q36.3	1	1
Del_2q37.1	Del_8p23.3	1	1
Del_2q37.1	Del_8p21.3	1	1
Del_2q37.1	Del_9p23	1	1
Del_2q37.1	Del_10q23.31	1	1
Del_2q37.1	Del_11p15.5	1	1
Del_2q37.1	Del_13q14.2	1	1
Del_2q37.1	Del_14q24.1	1	1
Del_2q37.1	Del_16p13.3	1	1
Del_2q37.1	Del_16q23.1	1	1
Del_2q37.1	Del_17p12	1	1
Del_2q37.1	Del_22q13.32	1	1
Del_3p14.2	Del_4q22.1	1	1
Del_3p14.2	Del_4q34.2	1	1
Del_3p14.2	Del_5q12.1	1	1
Del_3p14.2	Del_6q27	1	1
Del_3p14.2	Del_8p21.3	1	1
Del_3p14.2	Del_9p23	1	1
Del_3p14.2	Del_11p15.5	1	1
Del_3p14.2	Del_11q23.3	1	1
Del_3p14.2	Del_15q13.1	1	1
Del_3p14.2	Del_17p12	1	1
Del_3p14.2	Del_19p13.3	1	1
Del_3p14.2	Del_22q13.32	1	1
Del_4q22.1	Del_4q34.2	1	1
Del_4q22.1	Del_5q12.1	1	1
Del_4q22.1	Del_7q36.3	1	1
Del_4q34.2	Del_5q12.1	1	1
Del_4q34.2	Del_6q27	1	1
Del_4q34.2	Del_8p23.3	1	1
Del_4q34.2	Del_8p21.3	1	1
Del_4q34.2	Del_10q23.31	1	1
Del_4q34.2	Del_15q13.1	1	1
Del_4q34.2	Del_17p12	1	1
Del_5q12.1	Del_6q27	1	1
Del_5q12.1	Del_8p23.3	1	1
Del_5q12.1	Del_8p21.3	1	1
Del_5q12.1	Del_9p23	1	1
Del_5q12.1	Del_10q23.31	1	1
Del_5q12.1	Del_11p15.5	1	1
Del_5q12.1	Del_14q24.1	1	1
Del_5q12.1	Del_16p13.3	1	1
Del_5q12.1	Del_17p12	1	1
Del_5q12.1	Del_19p13.3	1	1
Del_5q12.1	Del_22q13.32	1	1
Del_6p25.3	Del_6q27	1	1
Del_6p25.3	Del_14q24.1	1	1
Del_6p25.3	Del_16q23.1	1	1
Del_6p25.3	Del_18q23	1	1
Del_6q27	Del_8p23.3	1	1
Del_6q27	Del_8p21.3	1	1
Del_6q27	Del_10q23.31	1	1
Del_6q27	Del_11p15.5	1	1
Del_6q27	Del_13q14.2	1	1
Del_6q27	Del_14q24.1	1	1
Del_6q27	Del_15q13.1	1	1
Del_6q27	Del_16p13.3	1	1
Del_6q27	Del_16q23.1	1	1
Del_6q27	Del_17p12	1	1
Del_6q27	Del_19p13.3	1	1
Del_6q27	Del_22q13.32	1	1
Del_7q36.3	Del_8p23.3	1	1
Del_7q36.3	Del_8p21.3	1	1
Del_8p23.3	Del_8p21.3	1	1
Del_8p23.3	Del_10q23.31	1	1
Del_8p23.3	Del_11p15.5	1	1
Del_8p23.3	Del_14q24.1	1	1
Del_8p23.3	Del_15q13.1	1	1
Del_8p23.3	Del_16p13.3	1	1
Del_8p23.3	Del_17p12	1	1
Del_8p23.3	Del_19p13.3	1	1
Del_8p23.3	Del_22q13.32	1	1
Del_8p21.3	Del_10q23.31	1	1
Del_8p21.3	Del_11p15.5	1	1
Del_8p21.3	Del_14q24.1	1	1
Del_8p21.3	Del_15q13.1	1	1
Del_8p21.3	Del_16p13.3	1	1
Del_8p21.3	Del_17p12	1	1
Del_8p21.3	Del_19p13.3	1	1
Del_8p21.3	Del_22q13.32	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_11p15.5	1	1
Del_9p23	Del_11q23.3	1	1
Del_9p23	Del_11q25	1	1
Del_9p23	Del_17p12	1	1
Del_9p23	Del_18q23	1	1
Del_9p21.3	Del_11p15.5	1	1
Del_9p21.3	Del_11q23.3	1	1
Del_9p21.3	Del_11q25	1	1
Del_9p21.3	Del_17p12	1	1
Del_10q23.31	Del_13q14.2	1	1
Del_10q23.31	Del_14q24.1	1	1
Del_10q23.31	Del_15q13.1	1	1
Del_10q23.31	Del_16p13.3	1	1
Del_10q23.31	Del_16q23.1	1	1
Del_10q23.31	Del_18q23	1	1
Del_10q23.31	Del_22q13.32	1	1
Del_11p15.5	Del_11q23.3	1	1
Del_11p15.5	Del_11q25	1	1
Del_11p15.5	Del_14q24.1	1	1
Del_11p15.5	Del_17p12	1	1
Del_11p15.5	Del_18q23	1	1
Del_11p15.5	Del_Xq21.33	1	1
Del_11q23.3	Del_11q25	1	1
Del_11q23.3	Del_17p12	1	1
Del_11q25	Del_17p12	1	1
Del_12p13.1	Del_17p12	1	1
Del_13q14.2	Del_16q23.1	1	1
Del_14q24.1	Del_15q13.1	1	1
Del_14q24.1	Del_16p13.3	1	1
Del_14q24.1	Del_17p12	1	1
Del_14q24.1	Del_22q13.32	1	1
Del_15q13.1	Del_16p13.3	1	1
Del_15q13.1	Del_16q23.1	1	1
Del_15q13.1	Del_22q13.32	1	1
Del_16p13.3	Del_16q23.1	1	1
Del_16p13.3	Del_17p12	1	1
Del_16p13.3	Del_22q13.32	1	1
Del_17p12	Del_19p13.3	1	1
Del_19p13.3	Del_22q13.32	1	1
TP53	Del_9p21.3	1.18e-05	1
RB1	9q-Del	1.4e-05	1
TP53	Amp_12q15	1.6e-11	1
RB1	9p-Del	2.23e-07	1
RB1	Del_9p21.3	3.07e-16	1
FGFR3	TP53	4.37e-05	1
TP53	9q-Del	7.03e-05	1
Amp_6p22.3	Del_9p21.3	7.94e-05	1
RB1	Del_9p23	8.5e-07	1
