[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
                            Clinical feature             
DAYS_TO_DEATH_OR_LAST_FUP   "DAYS_TO_DEATH_OR_LAST_FUP"  
YEARS_TO_BIRTH              "YEARS_TO_BIRTH"             
NEOPLASM_DISEASESTAGE       "NEOPLASM_DISEASESTAGE"      
PATHOLOGY_T_STAGE           "PATHOLOGY_T_STAGE"          
PATHOLOGY_N_STAGE           "PATHOLOGY_N_STAGE"          
PATHOLOGY_M_STAGE           "PATHOLOGY_M_STAGE"          
GENDER                      "GENDER"                     
KARNOFSKY_PERFORMANCE_SCORE "KARNOFSKY_PERFORMANCE_SCORE"
NUMBER_PACK_YEARS_SMOKED    "NUMBER_PACK_YEARS_SMOKED"   
NUMBER_OF_LYMPH_NODES       "NUMBER_OF_LYMPH_NODES"      
RACE                        "RACE"                       
ETHNICITY                   "ETHNICITY"                  
                            Statistical test            Significant miRs
DAYS_TO_DEATH_OR_LAST_FUP   "Cox regression test"       "N=30"          
YEARS_TO_BIRTH              "Spearman correlation test" "N=30"          
NEOPLASM_DISEASESTAGE       "Kruskal-Wallis test"       "N=30"          
PATHOLOGY_T_STAGE           "Spearman correlation test" "N=30"          
PATHOLOGY_N_STAGE           "Spearman correlation test" "N=30"          
PATHOLOGY_M_STAGE           "Wilcoxon test"             "N=15"          
GENDER                      "Wilcoxon test"             "N=11"          
KARNOFSKY_PERFORMANCE_SCORE "Spearman correlation test" "N=30"          
NUMBER_PACK_YEARS_SMOKED    "Spearman correlation test" "N=0"           
NUMBER_OF_LYMPH_NODES       "Spearman correlation test" "N=30"          
RACE                        "Kruskal-Wallis test"       "N=30"          
ETHNICITY                   "Wilcoxon test"             "N=0"           
                            Associated with               
DAYS_TO_DEATH_OR_LAST_FUP   "shorter survival"            
YEARS_TO_BIRTH              "older"                       
NEOPLASM_DISEASESTAGE       " "                           
PATHOLOGY_T_STAGE           "higher stage"                
PATHOLOGY_N_STAGE           "higher stage"                
PATHOLOGY_M_STAGE           "class1"                      
GENDER                      "male"                        
KARNOFSKY_PERFORMANCE_SCORE "higher score"                
NUMBER_PACK_YEARS_SMOKED    " "                           
NUMBER_OF_LYMPH_NODES       "higher number_of_lymph_nodes"
RACE                        " "                           
ETHNICITY                   " "                           
                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP   "N=24"                                                                                    
YEARS_TO_BIRTH              "N=26"                                                                                    
NEOPLASM_DISEASESTAGE       " "                                                                                       
PATHOLOGY_T_STAGE           "N=23"                                                                                    
PATHOLOGY_N_STAGE           "N=12"                                                                                    
PATHOLOGY_M_STAGE           "N=15"                                                                                    
GENDER                      "N=11"                                                                                    
KARNOFSKY_PERFORMANCE_SCORE "N=6"                                                                                     
NUMBER_PACK_YEARS_SMOKED    " "                                                                                       
NUMBER_OF_LYMPH_NODES       "N=11"                                                                                    
RACE                        " "                                                                                       
ETHNICITY                   " "                                                                                       
                            Associated with                     
DAYS_TO_DEATH_OR_LAST_FUP   "longer survival"             "N=6" 
YEARS_TO_BIRTH              "younger"                     "N=4" 
NEOPLASM_DISEASESTAGE       " "                           " "   
PATHOLOGY_T_STAGE           "lower stage"                 "N=7" 
PATHOLOGY_N_STAGE           "lower stage"                 "N=18"
PATHOLOGY_M_STAGE           "class0"                      "N=0" 
GENDER                      "female"                      "N=0" 
KARNOFSKY_PERFORMANCE_SCORE "lower score"                 "N=24"
NUMBER_PACK_YEARS_SMOKED    " "                           " "   
NUMBER_OF_LYMPH_NODES       "lower number_of_lymph_nodes" "N=19"
RACE                        " "                           " "   
ETHNICITY                   " "                           " "   
[1] "vtyp==survival in basici table generation"
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
