name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-2F-A9KO-01A-11D-A38G-08	682	664	18	494	2.639296e-02	coding only	1	28837673	...	162	455	630	5.617652e-06	1.577797e-05	2.184642e-05	-4.660620e+00	...	4	28781468	...	1.389783e-07
TCGA-2F-A9KP-01A-11D-A38G-08	173	169	4	131	2.312139e-02	coding only	1	28837673	...	34	116	159	1.179013e-06	4.022516e-06	5.513621e-06	-5.258563e+00	...	8	28781468	...	2.779566e-07
TCGA-2F-A9KQ-01A-11D-A38G-08	90	86	4	69	4.444444e-02	exome+100bp flanks	2	35955546	...	17	60	83	4.728061e-07	1.668727e-06	2.308406e-06	-5.636688e+00	...	6	32223214	...	1.862012e-07
TCGA-2F-A9KR-01A-11D-A38G-08	320	315	5	234	1.562500e-02	coding only	1	28837673	...	79	217	301	2.739472e-06	7.524879e-06	1.043774e-05	-4.981394e+00	...	3	28781468	...	1.042337e-07
TCGA-2F-A9KT-01A-11D-A38G-08	443	426	17	339	3.837472e-02	exome+100bp flanks	2	35955546	...	86	319	415	2.391842e-06	8.872067e-06	1.154203e-05	-4.937718e+00	...	5	32223214	...	1.551676e-07
TCGA-2F-A9KW-01A-11D-A38G-08	141	135	6	95	4.255319e-02	exome+100bp flanks	2	35955546	...	38	89	132	1.056861e-06	2.475279e-06	3.671200e-06	-5.435192e+00	...	4	32223214	...	1.241341e-07
TCGA-4Z-AA7M-01A-11D-A391-08	666	649	17	486	2.552553e-02	coding only	1	28837673	...	158	459	629	5.478944e-06	1.591668e-05	2.181175e-05	-4.661310e+00	...	8	28781468	...	2.779566e-07
TCGA-4Z-AA7N-01A-11D-A391-08	39	36	3	24	7.692308e-02	exome+100bp flanks	2	35955546	...	11	22	34	3.059333e-07	6.118667e-07	9.456121e-07	-6.024287e+00	...	1	32223214	...	3.103353e-08
TCGA-4Z-AA7O-01A-31D-A391-08	247	236	11	169	4.453441e-02	exome+100bp flanks	2	35955546	...	63	146	220	1.752164e-06	4.060570e-06	6.118667e-06	-5.213343e+00	...	9	32223214	...	2.793017e-07
TCGA-4Z-AA7Q-01A-11D-A391-08	316	304	12	232	3.797468e-02	exome+100bp flanks	2	35955546	...	70	204	284	1.946848e-06	5.673673e-06	7.898642e-06	-5.102448e+00	...	7	32223214	...	2.172347e-07
TCGA-4Z-AA7R-01A-11D-A391-08	450	436	14	325	3.111111e-02	exome+100bp flanks	2	35955546	...	108	303	422	3.003709e-06	8.427073e-06	1.173672e-05	-4.930453e+00	...	7	32223214	...	2.172347e-07
TCGA-4Z-AA7S-01A-11D-A391-08	87	83	4	65	4.597701e-02	exome+100bp flanks	2	35955546	...	17	55	80	4.728061e-07	1.529667e-06	2.224970e-06	-5.652676e+00	...	7	32223214	...	2.172347e-07
TCGA-4Z-AA7W-01A-11D-A391-08	670	658	12	521	1.791045e-02	coding only	1	28837673	...	130	491	629	4.507992e-06	1.702634e-05	2.181175e-05	-4.661310e+00	...	7	28781468	...	2.432121e-07
TCGA-4Z-AA7Y-01A-11D-A391-08	392	374	18	267	4.591837e-02	exome+100bp flanks	2	35955546	...	103	243	357	2.864648e-06	6.758345e-06	9.928927e-06	-5.003098e+00	...	7	32223214	...	2.172347e-07
TCGA-4Z-AA80-01A-11D-A391-08	530	518	12	386	2.264151e-02	coding only	1	28837673	...	126	359	499	4.369285e-06	1.244899e-05	1.730375e-05	-4.761860e+00	...	12	28781468	...	4.169350e-07
TCGA-4Z-AA81-01A-11D-A391-08	274	267	7	199	2.554745e-02	coding only	1	28837673	...	65	177	251	2.253996e-06	6.137805e-06	8.703892e-06	-5.060286e+00	...	9	28781468	...	3.127012e-07
TCGA-4Z-AA82-01A-11D-A391-08	140	134	6	99	4.285714e-02	exome+100bp flanks	2	35955546	...	35	85	129	9.734242e-07	2.364030e-06	3.587764e-06	-5.445176e+00	...	6	32223214	...	1.862012e-07
TCGA-4Z-AA83-01A-11D-A391-08	110	107	3	80	2.727273e-02	coding only	1	28837673	...	25	71	101	8.669215e-07	2.462057e-06	3.502363e-06	-5.455639e+00	...	4	28781468	...	1.389783e-07
TCGA-4Z-AA84-01A-11D-A391-08	624	621	3	424	4.807692e-03	coding only	1	28837673	...	184	389	590	6.380543e-06	1.348930e-05	2.045935e-05	-4.689108e+00	...	14	28781468	...	4.864241e-07
TCGA-4Z-AA86-01A-11D-A391-08	285	273	12	205	4.210526e-02	exome+100bp flanks	2	35955546	...	64	178	251	1.779976e-06	4.950558e-06	6.980842e-06	-5.156092e+00	...	6	32223214	...	1.862012e-07
TCGA-4Z-AA87-01A-11D-A391-08	329	319	10	245	3.039514e-02	exome+100bp flanks	2	35955546	...	71	219	307	1.974661e-06	6.090855e-06	8.538321e-06	-5.068628e+00	...	14	32223214	...	4.344694e-07
TCGA-4Z-AA89-01A-11D-A391-08	178	175	3	131	1.685393e-02	coding only	1	28837673	...	41	119	167	1.421751e-06	4.126547e-06	5.791036e-06	-5.237244e+00	...	4	28781468	...	1.389783e-07
TCGA-5N-A9KI-01A-31D-A42E-08	213	207	6	157	2.816901e-02	coding only	1	28837673	...	44	139	192	1.525782e-06	4.820084e-06	6.657957e-06	-5.176659e+00	...	7	28781468	...	2.432121e-07
TCGA-5N-A9KM-01A-11D-A42E-08	279	269	10	196	3.584229e-02	exome+100bp flanks	2	35955546	...	69	178	263	1.919036e-06	4.950558e-06	7.314588e-06	-5.135810e+00	...	12	32223214	...	3.724023e-07
TCGA-BL-A0C8-01A-11D-A10S-08	193	192	1	143	5.181347e-03	coding only	1	28837673	...	44	128	183	1.525782e-06	4.438638e-06	6.345866e-06	-5.197509e+00	...	10	28781468	...	3.474458e-07
TCGA-BL-A13I-01A-11D-A13W-08	126	120	6	94	4.761905e-02	exome+100bp flanks	2	35955546	...	25	87	116	6.953030e-07	2.419655e-06	3.226206e-06	-5.491308e+00	...	3	32223214	...	9.310058e-08
TCGA-BL-A13J-01A-11D-A10S-08	157	148	9	109	5.732484e-02	exome+100bp flanks	2	35955546	...	39	100	144	1.084673e-06	2.781212e-06	4.004945e-06	-5.397403e+00	...	3	32223214	...	9.310058e-08
TCGA-BL-A3JM-01A-12D-A21A-08	262	252	10	184	3.816794e-02	exome+100bp flanks	2	35955546	...	66	167	244	1.835600e-06	4.644624e-06	6.786158e-06	-5.168376e+00	...	6	32223214	...	1.862012e-07
TCGA-BL-A5ZZ-01A-31D-A30E-08	225	215	10	153	4.444444e-02	exome+100bp flanks	2	35955546	...	57	142	208	1.585291e-06	3.949321e-06	5.784921e-06	-5.237703e+00	...	5	32223214	...	1.551676e-07
TCGA-BT-A0S7-01A-11D-A10S-08	71	67	4	50	5.633803e-02	exome+100bp flanks	2	35955546	...	16	40	63	4.449939e-07	1.112485e-06	1.752164e-06	-5.756425e+00	...	7	32223214	...	2.172347e-07
TCGA-BT-A0YX-01A-11D-A10S-08	798	771	27	581	3.383459e-02	exome+100bp flanks	2	35955546	...	176	539	726	4.894933e-06	1.499073e-05	2.019160e-05	-4.694829e+00	...	4	32223214	...	1.241341e-07
TCGA-BT-A20J-01A-11D-A14W-08	597	587	10	437	1.675042e-02	coding only	1	28837673	...	145	405	557	5.028145e-06	1.404413e-05	1.931501e-05	-4.714105e+00	...	6	28781468	...	2.084675e-07
TCGA-BT-A20N-01A-11D-A14W-08	369	360	9	266	2.439024e-02	coding only	1	28837673	...	86	237	336	2.982210e-06	8.218416e-06	1.165143e-05	-4.933621e+00	...	11	28781468	...	3.821904e-07
TCGA-BT-A20O-01A-21D-A14W-08	248	239	9	187	3.629032e-02	exome+100bp flanks	2	35955546	...	51	171	226	1.418418e-06	4.755873e-06	6.285539e-06	-5.201657e+00	...	3	32223214	...	9.310058e-08
TCGA-BT-A20P-01A-11D-A14W-08	111	110	1	84	9.009009e-03	coding only	1	28837673	...	24	73	101	8.322447e-07	2.531411e-06	3.502363e-06	-5.455639e+00	...	4	28781468	...	1.389783e-07
TCGA-BT-A20Q-01A-11D-A14W-08	127	123	4	97	3.149606e-02	exome+100bp flanks	2	35955546	...	25	79	110	6.953030e-07	2.197158e-06	3.059333e-06	-5.514373e+00	...	6	32223214	...	1.862012e-07
TCGA-BT-A20R-01A-12D-A16O-08	364	353	11	265	3.021978e-02	exome+100bp flanks	2	35955546	...	85	240	334	2.364030e-06	6.674909e-06	9.289248e-06	-5.032019e+00	...	6	32223214	...	1.862012e-07
TCGA-BT-A20T-01A-11D-A14W-08	319	311	8	233	2.507837e-02	coding only	1	28837673	...	72	214	295	2.496734e-06	7.420848e-06	1.022967e-05	-4.990138e+00	...	4	28781468	...	1.389783e-07
TCGA-BT-A20U-01A-11D-A14W-08	113	110	3	90	2.654867e-02	coding only	1	28837673	...	18	84	105	6.241835e-07	2.912856e-06	3.641070e-06	-5.438771e+00	...	1	28781468	...	3.474458e-08
TCGA-BT-A20V-01A-11D-A14W-08	132	128	4	100	3.030303e-02	exome+100bp flanks	2	35955546	...	27	86	120	7.509273e-07	2.391842e-06	3.337455e-06	-5.476585e+00	...	7	32223214	...	2.172347e-07
TCGA-BT-A20W-01A-21D-A14W-08	125	122	3	96	2.400000e-02	coding only	1	28837673	...	26	89	117	9.015984e-07	3.086241e-06	4.057193e-06	-5.391774e+00	...	2	28781468	...	6.948916e-08
TCGA-BT-A20X-01A-11D-A16O-08	100	93	7	72	7.000000e-02	exome+100bp flanks	2	35955546	...	20	64	86	5.562424e-07	1.779976e-06	2.391842e-06	-5.621267e+00	...	2	32223214	...	6.206706e-08
TCGA-BT-A2LA-01A-11D-A18F-08	219	214	5	160	2.283105e-02	coding only	1	28837673	...	52	150	205	1.803197e-06	5.201529e-06	7.108757e-06	-5.148206e+00	...	1	28781468	...	3.474458e-08
TCGA-BT-A2LB-01A-11D-A18F-08	752	737	15	518	1.994681e-02	coding only	1	28837673	...	215	476	715	7.455525e-06	1.650619e-05	2.479396e-05	-4.605654e+00	...	17	28781468	...	5.906578e-07
TCGA-BT-A2LD-01A-12D-A20D-08	140	135	5	101	3.571429e-02	exome+100bp flanks	2	35955546	...	32	88	129	8.899879e-07	2.447467e-06	3.587764e-06	-5.445176e+00	...	8	32223214	...	2.482682e-07
TCGA-BT-A3PH-01A-11D-A21Z-08	564	552	12	424	2.127660e-02	coding only	1	28837673	...	124	395	529	4.299931e-06	1.369736e-05	1.834406e-05	-4.736505e+00	...	7	28781468	...	2.432121e-07
TCGA-BT-A3PJ-01A-21D-A21Z-08	637	617	20	452	3.139717e-02	exome+100bp flanks	2	35955546	...	157	413	588	4.366503e-06	1.148641e-05	1.635353e-05	-4.786389e+00	...	14	32223214	...	4.344694e-07
TCGA-BT-A3PK-01A-21D-A21Z-08	502	494	8	379	1.593625e-02	coding only	1	28837673	...	109	336	463	3.779778e-06	1.165143e-05	1.605539e-05	-4.794379e+00	...	15	28781468	...	5.211687e-07
TCGA-BT-A42B-01A-32D-A23M-08	90	86	4	62	4.444444e-02	exome+100bp flanks	2	35955546	...	22	55	81	6.118667e-07	1.529667e-06	2.252782e-06	-5.647281e+00	...	3	32223214	...	9.310058e-08
TCGA-BT-A42C-01A-11D-A23M-08	453	436	17	337	3.752759e-02	exome+100bp flanks	2	35955546	...	93	302	415	2.586527e-06	8.399261e-06	1.154203e-05	-4.937718e+00	...	16	32223214	...	4.965364e-07
TCGA-BT-A42E-01A-11D-A23U-08	218	211	7	164	3.211009e-02	exome+100bp flanks	2	35955546	...	45	150	202	1.251545e-06	4.171818e-06	5.618048e-06	-5.250415e+00	...	4	32223214	...	1.241341e-07
TCGA-BT-A42F-01A-11D-A23U-08	223	218	5	168	2.242152e-02	coding only	1	28837673	...	49	164	215	1.699166e-06	5.687005e-06	7.455525e-06	-5.127522e+00	...	1	28781468	...	3.474458e-08
TCGA-C4-A0EZ-01A-21D-A10S-08	248	240	8	178	3.225806e-02	exome+100bp flanks	2	35955546	...	58	167	231	1.613103e-06	4.644624e-06	6.424600e-06	-5.192154e+00	...	3	32223214	...	9.310058e-08
TCGA-C4-A0F0-01A-12D-A10S-08	115	111	4	84	3.478261e-02	exome+100bp flanks	2	35955546	...	25	71	108	6.953030e-07	1.974661e-06	3.003709e-06	-5.522342e+00	...	12	32223214	...	3.724023e-07
TCGA-C4-A0F1-01A-11D-A10S-08	217	212	5	152	2.304147e-02	coding only	1	28837673	...	54	137	194	1.872551e-06	4.750730e-06	6.727311e-06	-5.172158e+00	...	1	28781468	...	3.474458e-08
TCGA-C4-A0F6-01A-11D-A10S-08	253	248	5	189	1.976285e-02	coding only	1	28837673	...	57	178	241	1.976581e-06	6.172481e-06	8.357124e-06	-5.077943e+00	...	4	28781468	...	1.389783e-07
TCGA-C4-A0F7-01A-11D-A10S-08	99	97	2	70	2.020202e-02	coding only	1	28837673	...	24	60	88	8.322447e-07	2.080612e-06	3.051564e-06	-5.515478e+00	...	4	28781468	...	1.389783e-07
TCGA-CF-A1HR-01A-11D-A13W-08	397	388	9	288	2.267003e-02	coding only	1	28837673	...	92	262	363	3.190271e-06	9.085338e-06	1.258770e-05	-4.900054e+00	...	5	28781468	...	1.737229e-07
TCGA-CF-A1HS-01A-11D-A13W-08	380	369	11	277	2.894737e-02	coding only	1	28837673	...	88	256	351	3.051564e-06	8.877277e-06	1.217158e-05	-4.914653e+00	...	6	28781468	...	2.084675e-07
TCGA-CF-A27C-01A-11D-A16O-08	204	194	10	138	4.901961e-02	exome+100bp flanks	2	35955546	...	55	128	189	1.529667e-06	3.559952e-06	5.256491e-06	-5.279304e+00	...	6	32223214	...	1.862012e-07
TCGA-CF-A3MF-01A-12D-A21A-08	44	39	5	30	1.136364e-01	exome+100bp flanks	2	35955546	...	9	27	38	2.503091e-07	7.509273e-07	1.056861e-06	-5.975982e+00	...	2	32223214	...	6.206706e-08
TCGA-CF-A3MG-01A-11D-A20D-08	184	180	4	129	2.173913e-02	coding only	1	28837673	...	47	116	170	1.629813e-06	4.022516e-06	5.895066e-06	-5.229511e+00	...	7	28781468	...	2.432121e-07
TCGA-CF-A3MH-01A-11D-A20D-08	66	62	4	49	6.060606e-02	exome+100bp flanks	2	35955546	...	13	39	58	3.615576e-07	1.084673e-06	1.613103e-06	-5.792338e+00	...	6	32223214	...	1.862012e-07
TCGA-CF-A3MI-01A-11D-A20D-08	102	95	7	70	6.862745e-02	exome+100bp flanks	2	35955546	...	23	61	92	6.396788e-07	1.696539e-06	2.558715e-06	-5.591978e+00	...	4	32223214	...	1.241341e-07
TCGA-CF-A47S-01A-11D-A23U-08	38	37	1	31	2.631579e-02	exome+100bp flanks	2	35955546	...	6	22	37	1.668727e-07	6.118667e-07	1.029048e-06	-5.987564e+00	...	9	32223214	...	2.793017e-07
TCGA-CF-A47T-01A-11D-A23U-08	47	43	4	30	8.510638e-02	exome+100bp flanks	2	35955546	...	13	25	42	3.615576e-07	6.953030e-07	1.168109e-06	-5.932517e+00	...	3	32223214	...	9.310058e-08
TCGA-CF-A47V-01A-11D-A23U-08	97	94	3	68	3.092784e-02	exome+100bp flanks	2	35955546	...	25	64	89	6.953030e-07	1.779976e-06	2.475279e-06	-5.606376e+00	...	0	32223214	...	0
TCGA-CF-A47W-01A-11D-A23U-08	37	36	1	29	2.702703e-02	exome+100bp flanks	2	35955546	...	7	25	33	1.946848e-07	6.953030e-07	9.178000e-07	-6.037252e+00	...	1	32223214	...	3.103353e-08
TCGA-CF-A47X-01A-31D-A23U-08	411	400	11	299	2.676399e-02	coding only	1	28837673	...	95	275	382	3.294302e-06	9.536137e-06	1.324656e-05	-4.877897e+00	...	9	28781468	...	3.127012e-07
TCGA-CF-A47Y-01A-11D-A23U-08	88	87	1	66	1.136364e-02	coding only	1	28837673	...	21	56	82	7.282141e-07	1.941904e-06	2.843503e-06	-5.546146e+00	...	3	28781468	...	1.042337e-07
TCGA-CF-A5U8-01A-11D-A289-08	85	83	2	58	2.352941e-02	coding only	1	28837673	...	24	52	79	8.322447e-07	1.803197e-06	2.739472e-06	-5.562333e+00	...	3	28781468	...	1.042337e-07
TCGA-CF-A5UA-01A-11D-A289-08	110	104	6	79	5.454545e-02	exome+100bp flanks	2	35955546	...	23	71	96	6.396788e-07	1.974661e-06	2.669964e-06	-5.573495e+00	...	1	32223214	...	3.103353e-08
TCGA-CF-A7I0-01A-22D-A34U-08	66	62	4	38	6.060606e-02	exome+100bp flanks	2	35955546	...	22	34	58	6.118667e-07	9.456121e-07	1.613103e-06	-5.792338e+00	...	2	32223214	...	6.206706e-08
TCGA-CF-A9FF-01A-11D-A38G-08	200	197	3	150	1.500000e-02	coding only	1	28837673	...	44	128	180	1.525782e-06	4.438638e-06	6.241835e-06	-5.204688e+00	...	6	28781468	...	2.084675e-07
TCGA-CF-A9FH-01A-11D-A38G-08	55	51	4	43	7.272727e-02	exome+100bp flanks	2	35955546	...	8	39	50	2.224970e-07	1.084673e-06	1.390606e-06	-5.856796e+00	...	3	32223214	...	9.310058e-08
TCGA-CF-A9FL-01A-11D-A38G-08	85	78	7	61	8.235294e-02	exome+100bp flanks	2	35955546	...	16	42	73	4.449939e-07	1.168109e-06	2.030285e-06	-5.692443e+00	...	13	32223214	...	4.034359e-07
TCGA-CF-A9FM-01A-11D-A38G-08	35	30	5	21	1.428571e-01	exome+100bp flanks	2	35955546	...	8	16	29	2.224970e-07	4.449939e-07	8.065515e-07	-6.093368e+00	...	5	32223214	...	1.551676e-07
TCGA-CU-A0YN-01A-21D-A10S-08	205	195	10	150	4.878049e-02	exome+100bp flanks	2	35955546	...	40	132	182	1.112485e-06	3.671200e-06	5.061806e-06	-5.295695e+00	...	8	32223214	...	2.482682e-07
TCGA-CU-A0YO-01A-11D-A10S-08	147	139	8	109	5.442177e-02	exome+100bp flanks	2	35955546	...	28	98	132	7.787394e-07	2.725588e-06	3.671200e-06	-5.435192e+00	...	5	32223214	...	1.551676e-07
TCGA-CU-A0YR-01A-12D-A10S-08	194	188	6	142	3.092784e-02	exome+100bp flanks	2	35955546	...	45	122	182	1.251545e-06	3.393079e-06	5.061806e-06	-5.295695e+00	...	14	32223214	...	4.344694e-07
TCGA-CU-A3KJ-01A-11D-A21A-08	312	286	26	214	8.333333e-02	exome+100bp flanks	2	35955546	...	69	201	280	1.919036e-06	5.590236e-06	7.787394e-06	-5.108608e+00	...	7	32223214	...	2.172347e-07
TCGA-CU-A3QU-01A-11D-A22Z-08	134	126	8	89	5.970149e-02	exome+100bp flanks	2	35955546	...	36	78	120	1.001236e-06	2.169345e-06	3.337455e-06	-5.476585e+00	...	4	32223214	...	1.241341e-07
TCGA-CU-A3YL-01A-11D-A22Z-08	286	275	11	218	3.846154e-02	exome+100bp flanks	2	35955546	...	56	202	270	1.557479e-06	5.618048e-06	7.509273e-06	-5.124402e+00	...	9	32223214	...	2.793017e-07
TCGA-CU-A5W6-01A-11D-A289-08	277	274	3	207	1.083032e-02	coding only	1	28837673	...	64	195	267	2.219319e-06	6.761988e-06	9.258722e-06	-5.033449e+00	...	4	28781468	...	1.389783e-07
TCGA-CU-A72E-01A-12D-A339-08	134	130	4	93	2.985075e-02	coding only	1	28837673	...	37	82	127	1.283044e-06	2.843503e-06	4.403961e-06	-5.356156e+00	...	8	28781468	...	2.779566e-07
TCGA-DK-A1A3-01A-11D-A13W-08	782	764	18	565	2.301790e-02	coding only	1	28837673	...	189	527	731	6.553927e-06	1.827471e-05	2.534879e-05	-4.596043e+00	...	11	28781468	...	3.821904e-07
TCGA-DK-A1A5-01A-11D-A13W-08	337	322	15	235	4.451039e-02	exome+100bp flanks	2	35955546	...	86	222	318	2.391842e-06	6.174291e-06	8.844255e-06	-5.053339e+00	...	4	32223214	...	1.241341e-07
TCGA-DK-A1A6-01A-11D-A13W-08	394	378	16	291	4.060914e-02	exome+100bp flanks	2	35955546	...	84	264	362	2.336218e-06	7.342400e-06	1.006799e-05	-4.997057e+00	...	11	32223214	...	3.413688e-07
TCGA-DK-A1A7-01A-11D-A13W-08	275	267	8	214	2.909091e-02	coding only	1	28837673	...	53	195	260	1.837874e-06	6.761988e-06	9.015984e-06	-5.044987e+00	...	11	28781468	...	3.821904e-07
TCGA-DK-A1AA-01A-11D-A13W-08	100	97	3	78	3.000000e-02	exome+100bp flanks	2	35955546	...	18	69	93	5.006182e-07	1.919036e-06	2.586527e-06	-5.587283e+00	...	6	32223214	...	1.862012e-07
TCGA-DK-A1AB-01A-11D-A13W-08	258	247	11	181	4.263566e-02	exome+100bp flanks	2	35955546	...	63	168	234	1.752164e-06	4.672436e-06	6.508036e-06	-5.186550e+00	...	0	32223214	...	0
TCGA-DK-A1AC-01A-11D-A13W-08	1883	1838	45	1301	2.389804e-02	coding only	1	28837673	...	510	1206	1757	1.768520e-05	4.182030e-05	6.092725e-05	-4.215188e+00	...	21	28781468	...	7.296362e-07
TCGA-DK-A1AD-01A-11D-A13W-08	290	282	8	212	2.758621e-02	coding only	1	28837673	...	67	188	266	2.323350e-06	6.519250e-06	9.224045e-06	-5.035079e+00	...	6	28781468	...	2.084675e-07
TCGA-DK-A1AE-01A-11D-A13W-08	148	143	5	111	3.378378e-02	exome+100bp flanks	2	35955546	...	32	93	130	8.899879e-07	2.586527e-06	3.615576e-06	-5.441823e+00	...	4	32223214	...	1.241341e-07
TCGA-DK-A1AF-01A-11D-A13W-08	158	154	4	123	2.531646e-02	coding only	1	28837673	...	31	113	147	1.074983e-06	3.918485e-06	5.097499e-06	-5.292643e+00	...	1	28781468	...	3.474458e-08
TCGA-DK-A1AG-01A-11D-A13W-08	163	154	9	115	5.521472e-02	exome+100bp flanks	2	35955546	...	39	99	150	1.084673e-06	2.753400e-06	4.171818e-06	-5.379675e+00	...	9	32223214	...	2.793017e-07
TCGA-DK-A2HX-01A-12D-A18F-08	151	144	7	113	4.635762e-02	exome+100bp flanks	2	35955546	...	29	101	139	8.065515e-07	2.809024e-06	3.865885e-06	-5.412751e+00	...	5	32223214	...	1.551676e-07
TCGA-DK-A2I1-01A-11D-A17V-08	288	282	6	209	2.083333e-02	coding only	1	28837673	...	68	195	267	2.358027e-06	6.761988e-06	9.258722e-06	-5.033449e+00	...	3	28781468	...	1.042337e-07
TCGA-DK-A2I2-01A-11D-A17V-08	152	149	3	110	1.973684e-02	coding only	1	28837673	...	38	105	145	1.317721e-06	3.641070e-06	5.028145e-06	-5.298592e+00	...	2	28781468	...	6.948916e-08
TCGA-DK-A2I4-01A-11D-A21A-08	1199	1169	30	810	2.502085e-02	coding only	1	28837673	...	338	759	1112	1.172078e-05	2.631974e-05	3.856067e-05	-4.413855e+00	...	5	28781468	...	1.737229e-07
TCGA-DK-A2I6-01A-12D-A18F-08	356	347	9	247	2.528090e-02	coding only	1	28837673	...	97	225	336	3.363656e-06	7.802294e-06	1.165143e-05	-4.933621e+00	...	7	28781468	...	2.432121e-07
TCGA-DK-A3IK-01A-32D-A21A-08	271	256	15	208	5.535055e-02	exome+100bp flanks	2	35955546	...	47	189	245	1.307170e-06	5.256491e-06	6.813970e-06	-5.166600e+00	...	5	32223214	...	1.551676e-07
TCGA-DK-A3IL-01A-11D-A20D-08	230	222	8	181	3.478261e-02	exome+100bp flanks	2	35955546	...	38	163	216	1.056861e-06	4.533376e-06	6.007418e-06	-5.221312e+00	...	11	32223214	...	3.413688e-07
TCGA-DK-A3IM-01A-11D-A20D-08	126	120	6	86	4.761905e-02	exome+100bp flanks	2	35955546	...	32	78	118	8.899879e-07	2.169345e-06	3.281830e-06	-5.483884e+00	...	6	32223214	...	1.862012e-07
TCGA-DK-A3IN-01A-11D-A20D-08	494	483	11	357	2.226721e-02	coding only	1	28837673	...	119	328	454	4.126547e-06	1.137401e-05	1.574330e-05	-4.802904e+00	...	6	28781468	...	2.084675e-07
TCGA-DK-A3IQ-01A-31D-A20D-08	252	246	6	185	2.380952e-02	coding only	1	28837673	...	59	172	238	2.045935e-06	5.964420e-06	8.253093e-06	-5.083383e+00	...	7	28781468	...	2.432121e-07
TCGA-DK-A3IS-01A-21D-A21A-08	448	434	14	311	3.125000e-02	exome+100bp flanks	2	35955546	...	116	283	414	3.226206e-06	7.870830e-06	1.151422e-05	-4.938766e+00	...	8	32223214	...	2.482682e-07
TCGA-DK-A3IT-01A-31D-A20D-08	504	482	22	397	4.365079e-02	exome+100bp flanks	2	35955546	...	79	374	461	2.197158e-06	1.040173e-05	1.282139e-05	-4.892065e+00	...	4	32223214	...	1.241341e-07
TCGA-DK-A3IU-01A-11D-A20D-08	563	556	7	384	1.243339e-02	coding only	1	28837673	...	161	361	530	5.582975e-06	1.251835e-05	1.837874e-05	-4.735684e+00	...	7	28781468	...	2.432121e-07
TCGA-DK-A3IV-01A-22D-A21A-08	118	114	4	89	3.389831e-02	exome+100bp flanks	2	35955546	...	25	82	109	6.953030e-07	2.280594e-06	3.031521e-06	-5.518339e+00	...	1	32223214	...	3.103353e-08
TCGA-DK-A3WW-01A-22D-A23M-08	1483	1452	31	1083	2.090357e-02	coding only	1	28837673	...	356	1011	1392	1.234496e-05	3.505831e-05	4.827019e-05	-4.316321e+00	...	6	28781468	...	2.084675e-07
TCGA-DK-A3WX-01A-22D-A22Z-08	54	50	4	35	7.407407e-02	exome+100bp flanks	2	35955546	...	15	32	50	4.171818e-07	8.899879e-07	1.390606e-06	-5.856796e+00	...	3	32223214	...	9.310058e-08
TCGA-DK-A3WY-01A-11D-A22Z-08	24	23	1	17	4.166667e-02	exome+100bp flanks	2	35955546	...	6	16	22	1.668727e-07	4.449939e-07	6.118667e-07	-6.213343e+00	...	0	32223214	...	0
TCGA-DK-A3X1-01A-12D-A22Z-08	1100	1074	26	774	2.363636e-02	coding only	1	28837673	...	284	726	1025	9.848229e-06	2.517540e-05	3.554378e-05	-4.449236e+00	...	4	28781468	...	1.389783e-07
TCGA-DK-A3X2-01A-11D-A22Z-08	180	172	8	138	4.444444e-02	exome+100bp flanks	2	35955546	...	31	117	162	8.621758e-07	3.254018e-06	4.505564e-06	-5.346251e+00	...	12	32223214	...	3.724023e-07
TCGA-DK-A6AV-01A-12D-A30E-08	166	160	6	109	3.614458e-02	exome+100bp flanks	2	35955546	...	50	97	157	1.390606e-06	2.697776e-06	4.366503e-06	-5.359866e+00	...	7	32223214	...	2.172347e-07
TCGA-DK-A6AW-01A-11D-A30E-08	4670	4520	150	3612	3.211991e-02	exome+100bp flanks	2	35955546	...	853	3403	4312	2.372374e-05	9.464465e-05	1.199259e-04	-3.921087e+00	...	15	32223214	...	4.655029e-07
TCGA-DK-A6B0-01A-11D-A31L-08	43	41	2	33	4.651163e-02	exome+100bp flanks	2	35955546	...	7	24	36	1.946848e-07	6.674909e-07	1.001236e-06	-5.999463e+00	...	5	32223214	...	1.551676e-07
TCGA-DK-A6B1-01A-12D-A30E-08	186	174	12	133	6.451613e-02	exome+100bp flanks	2	35955546	...	40	115	167	1.112485e-06	3.198394e-06	4.644624e-06	-5.333049e+00	...	10	32223214	...	3.103353e-07
TCGA-DK-A6B2-01A-11D-A30E-08	258	244	14	180	5.426357e-02	exome+100bp flanks	2	35955546	...	60	158	233	1.668727e-06	4.394315e-06	6.480224e-06	-5.188410e+00	...	13	32223214	...	4.034359e-07
TCGA-DK-A6B5-01A-11D-A31L-08	176	170	6	126	3.409091e-02	exome+100bp flanks	2	35955546	...	42	116	161	1.168109e-06	3.226206e-06	4.477751e-06	-5.348940e+00	...	3	32223214	...	9.310058e-08
TCGA-DK-A6B6-01A-11D-A30E-08	1211	1192	19	804	1.568951e-02	coding only	1	28837673	...	375	754	1146	1.300382e-05	2.614635e-05	3.973968e-05	-4.400776e+00	...	12	28781468	...	4.169350e-07
TCGA-DK-AA6L-01A-11D-A391-08	505	495	10	379	1.980198e-02	coding only	1	28837673	...	113	339	474	3.918485e-06	1.175546e-05	1.643683e-05	-4.784182e+00	...	21	28781468	...	7.296362e-07
TCGA-DK-AA6M-01A-11D-A391-08	92	87	5	59	5.434783e-02	exome+100bp flanks	2	35955546	...	28	55	88	7.787394e-07	1.529667e-06	2.447467e-06	-5.611283e+00	...	3	32223214	...	9.310058e-08
TCGA-DK-AA6P-01A-11D-A391-08	262	259	3	194	1.145038e-02	coding only	1	28837673	...	64	175	246	2.219319e-06	6.068451e-06	8.530508e-06	-5.069025e+00	...	5	28781468	...	1.737229e-07
TCGA-DK-AA6Q-01A-11D-A391-08	151	145	6	113	3.973510e-02	exome+100bp flanks	2	35955546	...	28	103	139	7.787394e-07	2.864648e-06	3.865885e-06	-5.412751e+00	...	5	32223214	...	1.551676e-07
TCGA-DK-AA6R-01A-11D-A42E-08	428	419	9	330	2.102804e-02	coding only	1	28837673	...	85	300	400	2.947533e-06	1.040306e-05	1.387074e-05	-4.857900e+00	...	11	28781468	...	3.821904e-07
TCGA-DK-AA6S-01A-21D-A391-08	718	706	12	529	1.671309e-02	coding only	1	28837673	...	169	484	668	5.860390e-06	1.678360e-05	2.316414e-05	-4.635184e+00	...	10	28781468	...	3.474458e-07
TCGA-DK-AA6T-01A-11D-A391-08	106	84	22	66	2.075472e-01	exome+100bp flanks	2	35955546	...	18	60	81	5.006182e-07	1.668727e-06	2.252782e-06	-5.647281e+00	...	1	32223214	...	3.103353e-08
TCGA-DK-AA6U-01A-11D-A391-08	568	557	11	434	1.936620e-02	coding only	1	28837673	...	120	400	536	4.161223e-06	1.387074e-05	1.858680e-05	-4.730795e+00	...	13	28781468	...	4.516795e-07
TCGA-DK-AA6W-01A-12D-A391-08	325	316	9	237	2.769231e-02	coding only	1	28837673	...	74	222	304	2.566088e-06	7.698263e-06	1.054177e-05	-4.977087e+00	...	5	28781468	...	1.737229e-07
TCGA-DK-AA6X-01A-12D-A42E-08	145	140	5	115	3.448276e-02	exome+100bp flanks	2	35955546	...	24	103	132	6.674909e-07	2.864648e-06	3.671200e-06	-5.435192e+00	...	4	32223214	...	1.241341e-07
TCGA-DK-AA71-01A-31D-A391-08	825	808	17	595	2.060606e-02	coding only	1	28837673	...	208	561	781	7.212787e-06	1.945372e-05	2.708263e-05	-4.567309e+00	...	6	28781468	...	2.084675e-07
TCGA-DK-AA74-01A-11D-A391-08	289	281	8	231	2.768166e-02	coding only	1	28837673	...	48	214	268	1.664489e-06	7.420848e-06	9.293399e-06	-5.031825e+00	...	2	28781468	...	6.948916e-08
TCGA-DK-AA75-01A-11D-A391-08	606	587	19	421	3.135314e-02	exome+100bp flanks	2	35955546	...	159	386	562	4.422127e-06	1.073548e-05	1.563041e-05	-4.806030e+00	...	9	32223214	...	2.793017e-07
TCGA-DK-AA76-01A-11D-A391-08	313	304	9	236	2.875399e-02	coding only	1	28837673	...	64	215	287	2.219319e-06	7.455525e-06	9.952259e-06	-5.002078e+00	...	8	28781468	...	2.779566e-07
TCGA-DK-AA77-01A-11D-A391-08	453	442	11	325	2.428256e-02	coding only	1	28837673	...	111	306	425	3.849132e-06	1.061112e-05	1.473767e-05	-4.831571e+00	...	3	28781468	...	1.042337e-07
TCGA-E5-A2PC-01A-11D-A202-08	295	280	15	207	5.084746e-02	exome+100bp flanks	2	35955546	...	72	183	272	2.002473e-06	5.089618e-06	7.564897e-06	-5.121197e+00	...	8	32223214	...	2.482682e-07
TCGA-E5-A4TZ-01A-11D-A31L-08	616	600	16	446	2.597403e-02	coding only	1	28837673	...	148	394	562	5.132176e-06	1.366268e-05	1.948840e-05	-4.710224e+00	...	17	28781468	...	5.906578e-07
TCGA-E5-A4U1-01A-11D-A31L-08	822	799	23	603	2.798054e-02	coding only	1	28837673	...	181	563	754	6.276512e-06	1.952307e-05	2.614635e-05	-4.582589e+00	...	7	28781468	...	2.432121e-07
TCGA-E7-A3X6-01A-12D-A22Z-08	152	149	3	112	1.973684e-02	coding only	1	28837673	...	31	99	137	1.074983e-06	3.433009e-06	4.750730e-06	-5.323240e+00	...	6	28781468	...	2.084675e-07
TCGA-E7-A3Y1-01A-11D-A22Z-08	229	220	9	167	3.930131e-02	exome+100bp flanks	2	35955546	...	50	144	209	1.390606e-06	4.004945e-06	5.812733e-06	-5.235620e+00	...	12	32223214	...	3.724023e-07
TCGA-E7-A4IJ-01A-31D-A26M-08	431	420	11	300	2.552204e-02	coding only	1	28837673	...	111	277	397	3.849132e-06	9.605491e-06	1.376671e-05	-4.861170e+00	...	6	28781468	...	2.084675e-07
TCGA-E7-A4XJ-01A-11D-A26M-08	57	55	2	42	3.508772e-02	exome+100bp flanks	2	35955546	...	13	34	55	3.615576e-07	9.456121e-07	1.529667e-06	-5.815403e+00	...	7	32223214	...	2.172347e-07
TCGA-E7-A519-01A-11D-A26M-08	88	86	2	68	2.272727e-02	coding only	1	28837673	...	17	52	81	5.895066e-07	1.803197e-06	2.808826e-06	-5.551475e+00	...	11	28781468	...	3.821904e-07
TCGA-E7-A541-01A-11D-A26M-08	572	563	9	437	1.573427e-02	coding only	1	28837673	...	120	405	545	4.161223e-06	1.404413e-05	1.889889e-05	-4.723564e+00	...	15	28781468	...	5.211687e-07
TCGA-E7-A5KE-01A-11D-A289-08	265	261	4	180	1.509434e-02	coding only	1	28837673	...	75	165	249	2.600765e-06	5.721682e-06	8.634539e-06	-5.063761e+00	...	8	28781468	...	2.779566e-07
TCGA-E7-A5KF-01A-11D-A289-08	264	255	9	181	3.409091e-02	exome+100bp flanks	2	35955546	...	69	163	240	1.919036e-06	4.533376e-06	6.674909e-06	-5.175555e+00	...	5	32223214	...	1.551676e-07
TCGA-E7-A677-01A-11D-A30E-08	301	292	9	220	2.990033e-02	coding only	1	28837673	...	69	197	284	2.392703e-06	6.831342e-06	9.848229e-06	-5.006642e+00	...	16	28781468	...	5.559133e-07
TCGA-E7-A678-01A-11D-A30E-08	69	62	7	48	1.014493e-01	exome+100bp flanks	2	35955546	...	13	44	59	3.615576e-07	1.223733e-06	1.640915e-06	-5.784914e+00	...	2	32223214	...	6.206706e-08
TCGA-E7-A6MD-01A-41D-A34U-08	556	550	6	401	1.079137e-02	coding only	1	28837673	...	141	382	527	4.889438e-06	1.324656e-05	1.827471e-05	-4.738150e+00	...	3	28781468	...	1.042337e-07
TCGA-E7-A6ME-01A-22D-A32B-08	174	168	6	125	3.448276e-02	exome+100bp flanks	2	35955546	...	42	111	161	1.168109e-06	3.087145e-06	4.477751e-06	-5.348940e+00	...	8	32223214	...	2.482682e-07
TCGA-E7-A6MF-01A-12D-A32B-08	61	59	2	45	3.278689e-02	exome+100bp flanks	2	35955546	...	14	41	55	3.893697e-07	1.140297e-06	1.529667e-06	-5.815403e+00	...	0	32223214	...	0
TCGA-E7-A7DU-01A-11D-A32B-08	328	324	4	244	1.219512e-02	coding only	1	28837673	...	77	230	309	2.670118e-06	7.975678e-06	1.071515e-05	-4.970002e+00	...	0	28781468	...	0
TCGA-E7-A7DV-01A-11D-A339-08	393	383	10	297	2.544529e-02	coding only	1	28837673	...	82	278	366	2.843503e-06	9.640168e-06	1.269173e-05	-4.896479e+00	...	3	28781468	...	1.042337e-07
TCGA-E7-A7PW-01A-11D-A34U-08	142	138	4	96	2.816901e-02	coding only	1	28837673	...	40	81	124	1.387074e-06	2.808826e-06	4.299931e-06	-5.366539e+00	...	3	28781468	...	1.042337e-07
TCGA-E7-A7XN-01A-11D-A34U-08	1173	1140	33	876	2.813299e-02	coding only	1	28837673	...	250	815	1073	8.669215e-06	2.826164e-05	3.720827e-05	-4.429360e+00	...	5	28781468	...	1.737229e-07
TCGA-E7-A85H-01A-11D-A34U-08	536	527	9	400	1.679104e-02	coding only	1	28837673	...	122	354	509	4.230577e-06	1.227561e-05	1.765052e-05	-4.753242e+00	...	29	28781468	...	1.007593e-06
TCGA-E7-A97P-01A-11D-A38G-08	262	257	5	205	1.908397e-02	coding only	1	28837673	...	50	176	244	1.733843e-06	6.103128e-06	8.461154e-06	-5.072570e+00	...	16	28781468	...	5.559133e-07
TCGA-E7-A97Q-01A-11D-A38G-08	78	78	0	64	0	coding only	1	28837673	...	14	53	76	4.854761e-07	1.837874e-06	2.635441e-06	-5.579147e+00	...	9	28781468	...	3.127012e-07
TCGA-FD-A3B3-01A-12D-A202-08	229	223	6	165	2.620087e-02	coding only	1	28837673	...	57	150	214	1.976581e-06	5.201529e-06	7.420848e-06	-5.129546e+00	...	4	28781468	...	1.389783e-07
TCGA-FD-A3B4-01A-12D-A202-08	94	88	6	69	6.382979e-02	exome+100bp flanks	2	35955546	...	18	62	85	5.006182e-07	1.724352e-06	2.364030e-06	-5.626347e+00	...	4	32223214	...	1.241341e-07
TCGA-FD-A3B5-01A-11D-A20D-08	196	184	12	146	6.122449e-02	exome+100bp flanks	2	35955546	...	37	130	173	1.029048e-06	3.615576e-06	4.811497e-06	-5.317720e+00	...	4	32223214	...	1.241341e-07
TCGA-FD-A3B6-01A-21D-A20D-08	341	333	8	258	2.346041e-02	coding only	1	28837673	...	75	244	326	2.600765e-06	8.461154e-06	1.130466e-05	-4.946743e+00	...	5	28781468	...	1.737229e-07
TCGA-FD-A3B7-01A-31D-A20D-08	102	95	7	79	6.862745e-02	exome+100bp flanks	2	35955546	...	14	69	89	3.893697e-07	1.919036e-06	2.475279e-06	-5.606376e+00	...	6	32223214	...	1.862012e-07
TCGA-FD-A3B8-01A-31D-A20D-08	100	98	2	76	2.000000e-02	coding only	1	28837673	...	22	70	95	7.628910e-07	2.427380e-06	3.294302e-06	-5.482237e+00	...	1	28781468	...	3.474458e-08
TCGA-FD-A3N5-01A-11D-A21A-08	408	398	10	281	2.450980e-02	coding only	1	28837673	...	112	250	384	3.883809e-06	8.669215e-06	1.331591e-05	-4.875629e+00	...	19	28781468	...	6.601470e-07
TCGA-FD-A3N6-01A-11D-A21A-08	170	156	14	120	8.235294e-02	exome+100bp flanks	2	35955546	...	33	109	147	9.178000e-07	3.031521e-06	4.088382e-06	-5.388449e+00	...	4	32223214	...	1.241341e-07
TCGA-FD-A3NA-01A-11D-A21A-08	219	213	6	168	2.739726e-02	coding only	1	28837673	...	44	154	205	1.525782e-06	5.340237e-06	7.108757e-06	-5.148206e+00	...	5	28781468	...	1.737229e-07
TCGA-FD-A3SJ-01A-12D-A22Z-08	305	298	7	221	2.295082e-02	coding only	1	28837673	...	73	200	281	2.531411e-06	6.935372e-06	9.744198e-06	-5.011254e+00	...	7	28781468	...	2.432121e-07
TCGA-FD-A3SL-01A-21D-A22Z-08	282	275	7	213	2.482270e-02	coding only	1	28837673	...	61	181	255	2.115289e-06	6.276512e-06	8.842600e-06	-5.053420e+00	...	12	28781468	...	4.169350e-07
TCGA-FD-A3SM-01A-11D-A22Z-08	254	248	6	193	2.362205e-02	coding only	1	28837673	...	52	164	231	1.803197e-06	5.687005e-06	8.010355e-06	-5.096348e+00	...	9	28781468	...	3.127012e-07
TCGA-FD-A3SN-01A-12D-A22Z-08	492	476	16	344	3.252033e-02	exome+100bp flanks	2	35955546	...	125	307	453	3.476515e-06	8.538321e-06	1.259889e-05	-4.899668e+00	...	14	32223214	...	4.344694e-07
TCGA-FD-A3SO-01A-11D-A22Z-08	442	435	7	315	1.583710e-02	coding only	1	28837673	...	112	289	410	3.883809e-06	1.002161e-05	1.421751e-05	-4.847176e+00	...	5	28781468	...	1.737229e-07
TCGA-FD-A3SP-01A-31D-A22Z-08	162	154	8	109	4.938272e-02	exome+100bp flanks	2	35955546	...	44	95	149	1.223733e-06	2.642152e-06	4.144006e-06	-5.382580e+00	...	7	32223214	...	2.172347e-07
TCGA-FD-A3SQ-01A-21D-A22Z-08	103	98	5	73	4.854369e-02	exome+100bp flanks	2	35955546	...	25	65	97	6.953030e-07	1.807788e-06	2.697776e-06	-5.568994e+00	...	7	32223214	...	2.172347e-07
TCGA-FD-A3SR-01A-11D-A22Z-08	174	166	8	137	4.597701e-02	exome+100bp flanks	2	35955546	...	26	127	161	7.231151e-07	3.532139e-06	4.477751e-06	-5.348940e+00	...	6	32223214	...	1.862012e-07
TCGA-FD-A3SS-01A-12D-A22Z-08	628	609	19	447	3.025478e-02	exome+100bp flanks	2	35955546	...	154	411	582	4.283067e-06	1.143078e-05	1.618665e-05	-4.790843e+00	...	7	32223214	...	2.172347e-07
TCGA-FD-A43N-01A-11D-A23U-08	231	222	9	167	3.896104e-02	exome+100bp flanks	2	35955546	...	52	148	217	1.446230e-06	4.116194e-06	6.035230e-06	-5.219306e+00	...	13	32223214	...	4.034359e-07
TCGA-FD-A43P-01A-31D-A23U-08	532	514	18	376	3.383459e-02	exome+100bp flanks	2	35955546	...	133	353	495	3.699012e-06	9.817679e-06	1.376700e-05	-4.861161e+00	...	5	32223214	...	1.551676e-07
TCGA-FD-A43S-01A-21D-A23U-08	1	1	0	0	0	exome+100bp flanks	2	35955546	...	1	0	1	2.781212e-08	0	2.781212e-08	-7.555766e+00	...	0	32223214	...	0
TCGA-FD-A43U-01A-11D-A23U-08	105	98	7	72	6.666667e-02	exome+100bp flanks	2	35955546	...	25	65	97	6.953030e-07	1.807788e-06	2.697776e-06	-5.568994e+00	...	6	32223214	...	1.862012e-07
TCGA-FD-A43X-01A-11D-A23U-08	417	401	16	299	3.836930e-02	exome+100bp flanks	2	35955546	...	98	269	383	2.725588e-06	7.481461e-06	1.065204e-05	-4.972567e+00	...	10	32223214	...	3.103353e-07
TCGA-FD-A5BR-01A-11D-A26M-08	119	114	5	91	4.201681e-02	exome+100bp flanks	2	35955546	...	22	81	112	6.118667e-07	2.252782e-06	3.114958e-06	-5.506548e+00	...	8	32223214	...	2.482682e-07
TCGA-FD-A5BS-01A-21D-A26M-08	31	31	0	22	0	exome+100bp flanks	2	35955546	...	9	21	31	2.503091e-07	5.840545e-07	8.621758e-07	-6.064404e+00	...	1	32223214	...	3.103353e-08
TCGA-FD-A5BT-01A-11D-A26M-08	139	136	3	93	2.158273e-02	coding only	1	28837673	...	42	86	131	1.456428e-06	2.982210e-06	4.542669e-06	-5.342689e+00	...	2	28781468	...	6.948916e-08
TCGA-FD-A5BU-01A-31D-A26M-08	99	93	6	74	6.060606e-02	exome+100bp flanks	2	35955546	...	18	62	89	5.006182e-07	1.724352e-06	2.475279e-06	-5.606376e+00	...	8	32223214	...	2.482682e-07
TCGA-FD-A5BV-01A-11D-A26M-08	153	145	8	108	5.228758e-02	exome+100bp flanks	2	35955546	...	37	97	142	1.029048e-06	2.697776e-06	3.949321e-06	-5.403478e+00	...	7	32223214	...	2.172347e-07
TCGA-FD-A5BX-01A-11D-A26M-08	430	424	6	320	1.395349e-02	coding only	1	28837673	...	92	288	388	3.190271e-06	9.986936e-06	1.345462e-05	-4.871128e+00	...	4	28781468	...	1.389783e-07
TCGA-FD-A5BY-01A-31D-A289-08	69	63	6	52	8.695652e-02	exome+100bp flanks	2	35955546	...	11	46	61	3.059333e-07	1.279358e-06	1.696539e-06	-5.770436e+00	...	3	32223214	...	9.310058e-08
TCGA-FD-A5BZ-01A-11D-A289-08	167	162	5	116	2.994012e-02	coding only	1	28837673	...	45	112	157	1.560459e-06	3.883809e-06	5.444267e-06	-5.264061e+00	...	0	28781468	...	0
TCGA-FD-A5C0-01A-11D-A289-08	157	151	6	112	3.821656e-02	exome+100bp flanks	2	35955546	...	36	96	147	1.001236e-06	2.669964e-06	4.088382e-06	-5.388449e+00	...	13	32223214	...	4.034359e-07
TCGA-FD-A5C1-01A-11D-A289-08	201	194	7	149	3.482587e-02	exome+100bp flanks	2	35955546	...	39	133	184	1.084673e-06	3.699012e-06	5.117430e-06	-5.290948e+00	...	10	32223214	...	3.103353e-07
TCGA-FD-A62N-01A-11D-A30E-08	124	121	3	90	2.419355e-02	coding only	1	28837673	...	30	78	116	1.040306e-06	2.704795e-06	4.022516e-06	-5.395502e+00	...	8	28781468	...	2.779566e-07
TCGA-FD-A62O-01A-11D-A30E-08	247	234	13	172	5.263158e-02	exome+100bp flanks	2	35955546	...	59	156	229	1.640915e-06	4.338691e-06	6.368976e-06	-5.195930e+00	...	12	32223214	...	3.724023e-07
TCGA-FD-A62P-01A-32D-A30E-08	528	519	9	400	1.704545e-02	coding only	1	28837673	...	112	378	498	3.883809e-06	1.310785e-05	1.726908e-05	-4.762731e+00	...	5	28781468	...	1.737229e-07
TCGA-FD-A62S-01A-11D-A30E-08	109	104	5	82	4.587156e-02	exome+100bp flanks	2	35955546	...	21	73	99	5.840545e-07	2.030285e-06	2.753400e-06	-5.560131e+00	...	5	32223214	...	1.551676e-07
TCGA-FD-A6TA-01A-12D-A339-08	325	318	7	251	2.153846e-02	coding only	1	28837673	...	65	235	304	2.253996e-06	8.149063e-06	1.054177e-05	-4.977087e+00	...	2	28781468	...	6.948916e-08
TCGA-FD-A6TB-01A-12D-A339-08	264	257	7	196	2.651515e-02	coding only	1	28837673	...	56	179	239	1.941904e-06	6.207158e-06	8.287770e-06	-5.081562e+00	...	3	28781468	...	1.042337e-07
TCGA-FD-A6TC-01A-21D-A339-08	1222	1198	24	888	1.963993e-02	coding only	1	28837673	...	297	820	1148	1.029903e-05	2.843503e-05	3.980904e-05	-4.400018e+00	...	20	28781468	...	6.948916e-07
TCGA-FD-A6TD-01A-51D-A339-08	175	168	7	123	4.000000e-02	exome+100bp flanks	2	35955546	...	43	107	160	1.195921e-06	2.975897e-06	4.449939e-06	-5.351646e+00	...	7	32223214	...	2.172347e-07
TCGA-FD-A6TE-01A-12D-A339-08	294	286	8	214	2.721088e-02	coding only	1	28837673	...	69	198	275	2.392703e-06	6.866019e-06	9.536137e-06	-5.020628e+00	...	4	28781468	...	1.389783e-07
TCGA-FD-A6TF-01A-52D-A32B-08	188	179	9	136	4.787234e-02	exome+100bp flanks	2	35955546	...	40	121	169	1.112485e-06	3.365267e-06	4.700248e-06	-5.327879e+00	...	6	32223214	...	1.862012e-07
TCGA-FD-A6TG-01A-11D-A32B-08	517	508	9	386	1.740812e-02	coding only	1	28837673	...	116	361	489	4.022516e-06	1.251835e-05	1.695699e-05	-4.770651e+00	...	7	28781468	...	2.432121e-07
TCGA-FD-A6TH-01A-11D-A32B-08	204	198	6	153	2.941176e-02	coding only	1	28837673	...	43	136	187	1.491105e-06	4.716053e-06	6.484573e-06	-5.188119e+00	...	6	28781468	...	2.084675e-07
TCGA-FD-A6TI-01A-11D-A32B-08	157	148	9	123	5.732484e-02	exome+100bp flanks	2	35955546	...	25	112	147	6.953030e-07	3.114958e-06	4.088382e-06	-5.388449e+00	...	8	32223214	...	2.482682e-07
TCGA-FD-A6TK-01A-42D-A339-08	161	152	9	120	5.590062e-02	exome+100bp flanks	2	35955546	...	32	110	150	8.899879e-07	3.059333e-06	4.171818e-06	-5.379675e+00	...	5	32223214	...	1.551676e-07
TCGA-FJ-A3Z7-01A-12D-A23M-08	408	393	15	300	3.676471e-02	exome+100bp flanks	2	35955546	...	84	273	364	2.336218e-06	7.592709e-06	1.012361e-05	-4.994665e+00	...	6	32223214	...	1.862012e-07
TCGA-FJ-A3Z9-01A-11D-A26M-08	143	134	9	102	6.293706e-02	exome+100bp flanks	2	35955546	...	31	74	124	8.621758e-07	2.058097e-06	3.448703e-06	-5.462344e+00	...	18	32223214	...	5.586035e-07
TCGA-FJ-A3ZE-01A-11D-A23M-08	507	488	19	370	3.747535e-02	exome+100bp flanks	2	35955546	...	109	335	471	3.031521e-06	9.317061e-06	1.309951e-05	-4.882745e+00	...	17	32223214	...	5.275700e-07
TCGA-FJ-A3ZF-01A-11D-A23M-08	338	313	25	241	7.396450e-02	exome+100bp flanks	2	35955546	...	69	227	302	1.919036e-06	6.313351e-06	8.399261e-06	-5.075759e+00	...	4	32223214	...	1.241341e-07
TCGA-FJ-A871-01A-11D-A34U-08	71	68	3	54	4.225352e-02	exome+100bp flanks	2	35955546	...	14	46	65	3.893697e-07	1.279358e-06	1.807788e-06	-5.742853e+00	...	5	32223214	...	1.551676e-07
TCGA-FT-A3EE-01A-11D-A202-08	159	151	8	120	5.031447e-02	exome+100bp flanks	2	35955546	...	28	109	145	7.787394e-07	3.031521e-06	4.032758e-06	-5.394398e+00	...	5	32223214	...	1.551676e-07
TCGA-FT-A61P-01A-11D-A30E-08	209	205	4	150	1.913876e-02	coding only	1	28837673	...	52	139	197	1.803197e-06	4.820084e-06	6.831342e-06	-5.165494e+00	...	4	28781468	...	1.389783e-07
TCGA-G2-A2EC-01A-11D-A17V-08	229	220	9	167	3.930131e-02	exome+100bp flanks	2	35955546	...	52	153	214	1.446230e-06	4.255255e-06	5.951794e-06	-5.225352e+00	...	7	32223214	...	2.172347e-07
TCGA-G2-A2EF-01A-12D-A18F-08	333	327	6	248	1.801802e-02	coding only	1	28837673	...	77	226	315	2.670118e-06	7.836971e-06	1.092321e-05	-4.961650e+00	...	8	28781468	...	2.779566e-07
TCGA-G2-A2EJ-01A-11D-A17V-08	387	375	12	288	3.100775e-02	exome+100bp flanks	2	35955546	...	84	268	362	2.336218e-06	7.453648e-06	1.006799e-05	-4.997057e+00	...	7	32223214	...	2.172347e-07
TCGA-G2-A2EK-01A-22D-A18F-08	94	88	6	68	6.382979e-02	exome+100bp flanks	2	35955546	...	20	62	86	5.562424e-07	1.724352e-06	2.391842e-06	-5.621267e+00	...	2	32223214	...	6.206706e-08
TCGA-G2-A2EL-01A-12D-A18F-08	295	287	8	210	2.711864e-02	coding only	1	28837673	...	77	197	280	2.670118e-06	6.831342e-06	9.709521e-06	-5.012802e+00	...	3	28781468	...	1.042337e-07
TCGA-G2-A2EO-01A-11D-A17V-08	1073	1039	34	772	3.168686e-02	exome+100bp flanks	2	35955546	...	253	721	992	7.036467e-06	2.005254e-05	2.758962e-05	-4.559254e+00	...	9	32223214	...	2.793017e-07
TCGA-G2-A2ES-01A-11D-A17V-08	535	525	10	390	1.869159e-02	coding only	1	28837673	...	124	346	493	4.299931e-06	1.199819e-05	1.709569e-05	-4.767113e+00	...	20	28781468	...	6.948916e-07
TCGA-G2-A3IB-01A-11D-A20D-08	133	123	10	99	7.518797e-02	exome+100bp flanks	2	35955546	...	23	86	116	6.396788e-07	2.391842e-06	3.226206e-06	-5.491308e+00	...	7	32223214	...	2.172347e-07
TCGA-G2-A3IE-01A-11D-A20D-08	485	469	16	351	3.298969e-02	exome+100bp flanks	2	35955546	...	112	316	448	3.114958e-06	8.788630e-06	1.245983e-05	-4.904488e+00	...	15	32223214	...	4.655029e-07
TCGA-G2-A3VY-01A-11D-A22Z-08	905	881	24	677	2.651934e-02	coding only	1	28837673	...	191	621	835	6.623281e-06	2.153433e-05	2.895518e-05	-4.538274e+00	...	15	28781468	...	5.211687e-07
TCGA-G2-AA3B-01A-11D-A391-08	934	913	21	692	2.248394e-02	coding only	1	28837673	...	214	644	882	7.420848e-06	2.233190e-05	3.058499e-05	-4.514492e+00	...	14	28781468	...	4.864241e-07
TCGA-G2-AA3C-01A-21D-A391-08	307	300	7	223	2.280130e-02	coding only	1	28837673	...	75	205	291	2.600765e-06	7.108757e-06	1.009097e-05	-4.996067e+00	...	7	28781468	...	2.432121e-07
TCGA-G2-AA3D-01A-11D-A391-08	402	397	5	311	1.243781e-02	coding only	1	28837673	...	82	295	382	2.843503e-06	1.022967e-05	1.324656e-05	-4.877897e+00	...	4	28781468	...	1.389783e-07
TCGA-G2-AA3F-01A-12D-A42E-08	175	169	6	133	3.428571e-02	exome+100bp flanks	2	35955546	...	35	113	165	9.734242e-07	3.142770e-06	4.589000e-06	-5.338282e+00	...	12	32223214	...	3.724023e-07
TCGA-GC-A3BM-01A-11D-A22Z-08	174	163	11	116	6.321839e-02	exome+100bp flanks	2	35955546	...	46	99	157	1.279358e-06	2.753400e-06	4.366503e-06	-5.359866e+00	...	10	32223214	...	3.103353e-07
TCGA-GC-A3I6-01A-11D-A20D-08	247	235	12	172	4.858300e-02	exome+100bp flanks	2	35955546	...	61	155	226	1.696539e-06	4.310879e-06	6.285539e-06	-5.201657e+00	...	7	32223214	...	2.172347e-07
TCGA-GC-A3OO-01A-11D-A22Z-08	181	174	7	123	3.867403e-02	exome+100bp flanks	2	35955546	...	46	113	163	1.279358e-06	3.142770e-06	4.533376e-06	-5.343578e+00	...	0	32223214	...	0
TCGA-GC-A3RB-01A-12D-A21Z-08	220	207	13	147	5.909091e-02	exome+100bp flanks	2	35955546	...	56	128	193	1.557479e-06	3.559952e-06	5.367739e-06	-5.270209e+00	...	6	32223214	...	1.862012e-07
TCGA-GC-A3RC-01A-11D-A22Z-08	470	456	14	317	2.978723e-02	coding only	1	28837673	...	136	282	446	4.716053e-06	9.778875e-06	1.546588e-05	-4.810625e+00	...	24	28781468	...	8.338699e-07
TCGA-GC-A3RD-01A-12D-A22Z-08	118	112	6	79	5.084746e-02	exome+100bp flanks	2	35955546	...	32	68	109	8.899879e-07	1.891224e-06	3.031521e-06	-5.518339e+00	...	8	32223214	...	2.482682e-07
TCGA-GC-A3WC-01A-31D-A22Z-08	200	190	10	146	5.000000e-02	exome+100bp flanks	2	35955546	...	42	126	176	1.168109e-06	3.504327e-06	4.894933e-06	-5.310253e+00	...	5	32223214	...	1.551676e-07
TCGA-GC-A3YS-01A-11D-A23M-08	305	295	10	219	3.278689e-02	exome+100bp flanks	2	35955546	...	72	208	288	2.002473e-06	5.784921e-06	8.009891e-06	-5.096373e+00	...	6	32223214	...	1.862012e-07
TCGA-GC-A6I1-01A-12D-A31L-08	298	294	4	210	1.342282e-02	coding only	1	28837673	...	83	190	279	2.878180e-06	6.588604e-06	9.674844e-06	-5.014356e+00	...	5	28781468	...	1.737229e-07
TCGA-GC-A6I3-01A-11D-A31L-08	304	290	14	216	4.605263e-02	exome+100bp flanks	2	35955546	...	68	195	272	1.891224e-06	5.423364e-06	7.564897e-06	-5.121197e+00	...	8	32223214	...	2.482682e-07
TCGA-GD-A2C5-01A-12D-A17V-08	353	346	7	254	1.983003e-02	coding only	1	28837673	...	87	238	334	3.016887e-06	8.253093e-06	1.158207e-05	-4.936214e+00	...	7	28781468	...	2.432121e-07
TCGA-GD-A3OP-01A-21D-A21Z-08	542	525	17	389	3.136531e-02	exome+100bp flanks	2	35955546	...	132	354	498	3.671200e-06	9.845491e-06	1.385044e-05	-4.858537e+00	...	12	32223214	...	3.724023e-07
TCGA-GD-A3OQ-01A-32D-A21Z-08	142	136	6	114	4.225352e-02	exome+100bp flanks	2	35955546	...	21	103	129	5.840545e-07	2.864648e-06	3.587764e-06	-5.445176e+00	...	5	32223214	...	1.551676e-07
TCGA-GD-A3OS-01A-12D-A21Z-08	120	115	5	88	4.166667e-02	exome+100bp flanks	2	35955546	...	26	82	114	7.231151e-07	2.280594e-06	3.170582e-06	-5.498861e+00	...	4	32223214	...	1.241341e-07
TCGA-GD-A6C6-01A-21D-A31L-08	345	334	11	238	3.188406e-02	exome+100bp flanks	2	35955546	...	90	211	316	2.503091e-06	5.868358e-06	8.788630e-06	-5.056079e+00	...	9	32223214	...	2.793017e-07
TCGA-GD-A76B-01A-11D-A32B-08	251	246	5	192	1.992032e-02	coding only	1	28837673	...	49	170	226	1.699166e-06	5.895066e-06	7.836971e-06	-5.105852e+00	...	4	28781468	...	1.389783e-07
TCGA-GU-A42P-01A-11D-A23U-08	338	328	10	217	2.958580e-02	coding only	1	28837673	...	107	196	313	3.710424e-06	6.796665e-06	1.085386e-05	-4.964416e+00	...	7	28781468	...	2.432121e-07
TCGA-GU-A42Q-01A-11D-A23U-08	229	222	7	167	3.056769e-02	exome+100bp flanks	2	35955546	...	53	157	215	1.474042e-06	4.366503e-06	5.979606e-06	-5.223327e+00	...	3	32223214	...	9.310058e-08
TCGA-GU-A42R-01A-11D-A23M-08	211	204	7	138	3.317536e-02	exome+100bp flanks	2	35955546	...	64	126	196	1.779976e-06	3.504327e-06	5.451176e-06	-5.263510e+00	...	4	32223214	...	1.241341e-07
TCGA-GU-A762-01A-11D-A339-08	132	125	7	93	5.303030e-02	exome+100bp flanks	2	35955546	...	32	81	121	8.899879e-07	2.252782e-06	3.365267e-06	-5.472981e+00	...	5	32223214	...	1.551676e-07
TCGA-GU-A763-01A-11D-A32B-08	89	85	4	63	4.494382e-02	exome+100bp flanks	2	35955546	...	20	56	81	5.562424e-07	1.557479e-06	2.252782e-06	-5.647281e+00	...	5	32223214	...	1.551676e-07
TCGA-GU-A764-01A-11D-A34U-08	180	172	8	129	4.444444e-02	exome+100bp flanks	2	35955546	...	41	114	158	1.140297e-06	3.170582e-06	4.394315e-06	-5.357109e+00	...	3	32223214	...	9.310058e-08
TCGA-GU-A766-01A-11D-A32B-08	236	233	3	175	1.271186e-02	coding only	1	28837673	...	56	165	225	1.941904e-06	5.721682e-06	7.802294e-06	-5.107778e+00	...	3	28781468	...	1.042337e-07
TCGA-GU-A767-01A-11D-A32B-08	552	541	11	414	1.992754e-02	coding only	1	28837673	...	117	376	510	4.057193e-06	1.303850e-05	1.768520e-05	-4.752390e+00	...	12	28781468	...	4.169350e-07
TCGA-GU-AATO-01A-11D-A391-08	401	394	7	299	1.745636e-02	coding only	1	28837673	...	91	278	372	3.155594e-06	9.640168e-06	1.289979e-05	-4.889417e+00	...	3	28781468	...	1.042337e-07
TCGA-GU-AATP-01A-11D-A391-08	418	406	12	308	2.870813e-02	coding only	1	28837673	...	92	277	386	3.190271e-06	9.605491e-06	1.338527e-05	-4.873373e+00	...	13	28781468	...	4.516795e-07
TCGA-GU-AATQ-01A-11D-A391-08	217	210	7	154	3.225806e-02	exome+100bp flanks	2	35955546	...	54	149	207	1.501855e-06	4.144006e-06	5.757109e-06	-5.239796e+00	...	3	32223214	...	9.310058e-08
TCGA-GV-A3JV-01A-11D-A21Z-08	165	154	11	118	6.666667e-02	exome+100bp flanks	2	35955546	...	35	98	144	9.734242e-07	2.725588e-06	4.004945e-06	-5.397403e+00	...	9	32223214	...	2.793017e-07
TCGA-GV-A3JW-01A-11D-A20D-08	102	98	4	71	3.921569e-02	exome+100bp flanks	2	35955546	...	27	68	97	7.509273e-07	1.891224e-06	2.697776e-06	-5.568994e+00	...	1	32223214	...	3.103353e-08
TCGA-GV-A3JX-01A-11D-A20D-08	383	375	8	295	2.088773e-02	coding only	1	28837673	...	76	267	353	2.635441e-06	9.258722e-06	1.224093e-05	-4.912186e+00	...	9	28781468	...	3.127012e-07
TCGA-GV-A3JZ-01A-11D-A21A-08	578	565	13	432	2.249135e-02	coding only	1	28837673	...	126	407	546	4.369285e-06	1.411348e-05	1.893357e-05	-4.722768e+00	...	9	28781468	...	3.127012e-07
TCGA-GV-A3QF-01A-31D-A22Z-08	175	171	4	126	2.285714e-02	coding only	1	28837673	...	43	107	165	1.491105e-06	3.710424e-06	5.721682e-06	-5.242476e+00	...	12	28781468	...	4.169350e-07
TCGA-GV-A3QG-01A-11D-A21Z-08	114	110	4	88	3.508772e-02	exome+100bp flanks	2	35955546	...	20	72	103	5.562424e-07	2.002473e-06	2.864648e-06	-5.542929e+00	...	9	32223214	...	2.793017e-07
TCGA-GV-A3QH-01A-11D-A21Z-08	235	227	8	171	3.404255e-02	exome+100bp flanks	2	35955546	...	54	158	219	1.501855e-06	4.394315e-06	6.090855e-06	-5.215322e+00	...	6	32223214	...	1.862012e-07
TCGA-GV-A3QI-01A-11D-A21Z-08	597	583	14	430	2.345059e-02	coding only	1	28837673	...	146	391	551	5.062822e-06	1.355865e-05	1.910695e-05	-4.718809e+00	...	13	28781468	...	4.516795e-07
TCGA-GV-A3QK-01B-11D-A23M-08	188	180	8	131	4.255319e-02	exome+100bp flanks	2	35955546	...	47	113	176	1.307170e-06	3.142770e-06	4.894933e-06	-5.310253e+00	...	12	32223214	...	3.724023e-07
TCGA-GV-A40E-01A-12D-A23M-08	204	198	6	150	2.941176e-02	coding only	1	28837673	...	48	132	192	1.664489e-06	4.577346e-06	6.657957e-06	-5.176659e+00	...	12	28781468	...	4.169350e-07
TCGA-GV-A40G-01A-11D-A23M-08	225	217	8	163	3.555556e-02	exome+100bp flanks	2	35955546	...	51	148	210	1.418418e-06	4.116194e-06	5.840545e-06	-5.233547e+00	...	7	32223214	...	2.172347e-07
TCGA-GV-A6ZA-01A-12D-A339-08	396	384	12	296	3.030303e-02	exome+100bp flanks	2	35955546	...	80	280	367	2.224970e-06	7.787394e-06	1.020705e-05	-4.991100e+00	...	3	32223214	...	9.310058e-08
TCGA-H4-A2HO-01A-11D-A17V-08	119	117	2	85	1.680672e-02	coding only	1	28837673	...	32	77	114	1.109660e-06	2.670118e-06	3.953162e-06	-5.403055e+00	...	5	28781468	...	1.737229e-07
TCGA-H4-A2HQ-01A-11D-A17V-08	584	565	19	423	3.253425e-02	exome+100bp flanks	2	35955546	...	133	392	539	3.699012e-06	1.090235e-05	1.499073e-05	-4.824177e+00	...	7	32223214	...	2.172347e-07
TCGA-HQ-A2OE-01A-11D-A202-08	193	188	5	145	2.590674e-02	coding only	1	28837673	...	41	131	180	1.421751e-06	4.542669e-06	6.241835e-06	-5.204688e+00	...	7	28781468	...	2.432121e-07
TCGA-HQ-A2OF-01A-11D-A26M-08	157	146	11	103	7.006369e-02	exome+100bp flanks	2	35955546	...	41	92	140	1.140297e-06	2.558715e-06	3.893697e-06	-5.409638e+00	...	6	32223214	...	1.862012e-07
TCGA-HQ-A5ND-01A-11D-A26M-08	114	109	5	78	4.385965e-02	exome+100bp flanks	2	35955546	...	30	69	106	8.343636e-07	1.919036e-06	2.948085e-06	-5.530460e+00	...	4	32223214	...	1.241341e-07
TCGA-HQ-A5NE-01A-12D-A289-08	443	433	10	319	2.257336e-02	coding only	1	28837673	...	109	297	417	3.779778e-06	1.029903e-05	1.446025e-05	-4.839824e+00	...	7	28781468	...	2.432121e-07
TCGA-K4-A3WS-01A-11D-A22Z-08	347	342	5	273	1.440922e-02	coding only	1	28837673	...	61	243	317	2.115289e-06	8.426477e-06	1.099257e-05	-4.958901e+00	...	9	28781468	...	3.127012e-07
TCGA-K4-A3WU-01B-11D-A23M-08	275	266	9	203	3.272727e-02	exome+100bp flanks	2	35955546	...	61	187	256	1.696539e-06	5.200867e-06	7.119903e-06	-5.147526e+00	...	6	32223214	...	1.862012e-07
TCGA-K4-A3WV-01A-11D-A22Z-08	91	84	7	62	7.692308e-02	exome+100bp flanks	2	35955546	...	22	56	83	6.118667e-07	1.557479e-06	2.308406e-06	-5.636688e+00	...	3	32223214	...	9.310058e-08
TCGA-K4-A4AB-01B-12D-A289-08	124	119	5	86	4.032258e-02	exome+100bp flanks	2	35955546	...	33	74	112	9.178000e-07	2.058097e-06	3.114958e-06	-5.506548e+00	...	5	32223214	...	1.551676e-07
TCGA-K4-A4AC-01A-21D-A26M-08	184	181	3	133	1.630435e-02	coding only	1	28837673	...	48	119	174	1.664489e-06	4.126547e-06	6.033774e-06	-5.219411e+00	...	6	28781468	...	2.084675e-07
TCGA-K4-A54R-01A-11D-A26M-08	1152	1125	27	839	2.343750e-02	coding only	1	28837673	...	272	785	1075	9.432106e-06	2.722134e-05	3.727763e-05	-4.428552e+00	...	7	28781468	...	2.432121e-07
TCGA-K4-A5RH-01A-11D-A30E-08	245	235	10	178	4.081633e-02	exome+100bp flanks	2	35955546	...	51	159	218	1.418418e-06	4.422127e-06	6.063042e-06	-5.217309e+00	...	5	32223214	...	1.551676e-07
TCGA-K4-A5RI-01A-11D-A289-08	182	175	7	128	3.846154e-02	exome+100bp flanks	2	35955546	...	41	113	164	1.140297e-06	3.142770e-06	4.561188e-06	-5.340922e+00	...	10	32223214	...	3.103353e-07
TCGA-K4-A5RJ-01A-11D-A289-08	445	424	21	313	4.719101e-02	exome+100bp flanks	2	35955546	...	105	299	412	2.920273e-06	8.315824e-06	1.145859e-05	-4.940869e+00	...	1	32223214	...	3.103353e-08
TCGA-K4-A6FZ-01A-11D-A31L-08	472	464	8	361	1.694915e-02	coding only	1	28837673	...	100	337	449	3.467686e-06	1.168610e-05	1.556991e-05	-4.807714e+00	...	11	28781468	...	3.821904e-07
TCGA-K4-A6MB-01A-11D-A31L-08	436	422	14	304	3.211009e-02	exome+100bp flanks	2	35955546	...	109	284	403	3.031521e-06	7.898642e-06	1.120828e-05	-4.950461e+00	...	5	32223214	...	1.551676e-07
TCGA-K4-A83P-01A-11D-A34U-08	453	432	21	329	4.635762e-02	exome+100bp flanks	2	35955546	...	94	309	413	2.614339e-06	8.593945e-06	1.148641e-05	-4.939816e+00	...	8	32223214	...	2.482682e-07
TCGA-K4-AAQO-01A-11D-A38G-08	321	311	10	239	3.115265e-02	exome+100bp flanks	2	35955546	...	65	220	292	1.807788e-06	6.118667e-06	8.121139e-06	-5.090383e+00	...	5	32223214	...	1.551676e-07
TCGA-KQ-A41N-01A-11D-A339-08	312	302	10	239	3.205128e-02	exome+100bp flanks	2	35955546	...	63	199	283	1.752164e-06	5.534612e-06	7.870830e-06	-5.103979e+00	...	19	32223214	...	5.896370e-07
TCGA-KQ-A41O-01A-12D-A34U-08	305	299	6	219	1.967213e-02	coding only	1	28837673	...	76	199	286	2.635441e-06	6.900695e-06	9.917582e-06	-5.003594e+00	...	7	28781468	...	2.432121e-07
TCGA-KQ-A41P-01A-12D-A339-08	399	391	8	285	2.005013e-02	coding only	1	28837673	...	102	264	376	3.537040e-06	9.154692e-06	1.303850e-05	-4.884772e+00	...	6	28781468	...	2.084675e-07
TCGA-KQ-A41Q-01A-11D-A339-08	196	186	10	137	5.102041e-02	exome+100bp flanks	2	35955546	...	48	123	184	1.334982e-06	3.420891e-06	5.117430e-06	-5.290948e+00	...	10	32223214	...	3.103353e-07
TCGA-KQ-A41R-01A-21D-A34U-08	983	960	23	688	2.339776e-02	coding only	1	28837673	...	266	619	918	9.224045e-06	2.146498e-05	3.183336e-05	-4.497118e+00	...	25	28781468	...	8.686145e-07
TCGA-KQ-A41S-01A-12D-A339-08	321	310	11	238	3.426791e-02	exome+100bp flanks	2	35955546	...	71	222	303	1.974661e-06	6.174291e-06	8.427073e-06	-5.074323e+00	...	7	32223214	...	2.172347e-07
TCGA-LC-A66R-01A-41D-A30E-08	173	167	6	124	3.468208e-02	exome+100bp flanks	2	35955546	...	42	112	159	1.168109e-06	3.114958e-06	4.422127e-06	-5.354369e+00	...	5	32223214	...	1.551676e-07
TCGA-LT-A5Z6-01A-11D-A289-08	667	645	22	467	3.298351e-02	exome+100bp flanks	2	35955546	...	169	436	615	4.700248e-06	1.212608e-05	1.710445e-05	-4.766891e+00	...	5	32223214	...	1.551676e-07
TCGA-MV-A51V-01A-11D-A26M-08	2350	2307	43	1812	1.829787e-02	coding only	1	28837673	...	465	1688	2174	1.612474e-05	5.853454e-05	7.538750e-05	-4.122701e+00	...	6	28781468	...	2.084675e-07
TCGA-PQ-A6FI-01A-11D-A31L-08	203	192	11	150	5.418719e-02	exome+100bp flanks	2	35955546	...	40	133	184	1.112485e-06	3.699012e-06	5.117430e-06	-5.290948e+00	...	10	32223214	...	3.103353e-07
TCGA-PQ-A6FN-01A-11D-A31L-08	103	101	2	78	1.941748e-02	coding only	1	28837673	...	22	70	99	7.628910e-07	2.427380e-06	3.433009e-06	-5.464325e+00	...	5	28781468	...	1.737229e-07
TCGA-R3-A69X-01A-22D-A30E-08	278	271	7	203	2.517986e-02	coding only	1	28837673	...	63	191	261	2.184642e-06	6.623281e-06	9.050661e-06	-5.043320e+00	...	3	28781468	...	1.042337e-07
TCGA-S5-A6DX-01A-11D-A31L-08	831	809	22	599	2.647413e-02	coding only	1	28837673	...	200	558	769	6.935372e-06	1.934969e-05	2.666651e-05	-4.574034e+00	...	6	28781468	...	2.084675e-07
TCGA-S5-AA26-01A-11D-A38G-08	284	277	7	220	2.464789e-02	coding only	1	28837673	...	51	205	261	1.768520e-06	7.108757e-06	9.050661e-06	-5.043320e+00	...	4	28781468	...	1.389783e-07
TCGA-SY-A9G0-01A-12D-A38G-08	70	67	3	50	4.285714e-02	exome+100bp flanks	2	35955546	...	17	48	66	4.728061e-07	1.334982e-06	1.835600e-06	-5.736222e+00	...	0	32223214	...	0
TCGA-SY-A9G5-01A-11D-A38G-08	1243	1211	32	928	2.574417e-02	coding only	1	28837673	...	272	875	1166	9.432106e-06	3.034225e-05	4.043322e-05	-4.393262e+00	...	9	28781468	...	3.127012e-07
TCGA-UY-A78K-01A-11D-A339-08	1132	1105	27	856	2.385159e-02	coding only	1	28837673	...	239	779	1062	8.287770e-06	2.701328e-05	3.682683e-05	-4.433836e+00	...	37	28781468	...	1.285549e-06
TCGA-UY-A78L-01A-12D-A339-08	270	261	9	187	3.333333e-02	exome+100bp flanks	2	35955546	...	70	174	251	1.946848e-06	4.839309e-06	6.980842e-06	-5.156092e+00	...	5	32223214	...	1.551676e-07
TCGA-UY-A78M-01A-21D-A34U-08	202	196	6	151	2.970297e-02	coding only	1	28837673	...	44	135	187	1.525782e-06	4.681376e-06	6.484573e-06	-5.188119e+00	...	7	28781468	...	2.432121e-07
TCGA-UY-A78N-01A-12D-A339-08	294	289	5	218	1.700680e-02	coding only	1	28837673	...	66	192	274	2.288673e-06	6.657957e-06	9.501460e-06	-5.022210e+00	...	14	28781468	...	4.864241e-07
TCGA-UY-A78O-01A-12D-A339-08	245	241	4	187	1.632653e-02	coding only	1	28837673	...	52	169	230	1.803197e-06	5.860390e-06	7.975678e-06	-5.098232e+00	...	5	28781468	...	1.737229e-07
TCGA-UY-A8OB-01A-12D-A42E-08	400	390	10	319	2.500000e-02	coding only	1	28837673	...	67	292	375	2.323350e-06	1.012564e-05	1.300382e-05	-4.885929e+00	...	14	28781468	...	4.864241e-07
TCGA-UY-A9PA-01A-11D-A38G-08	253	244	9	186	3.557312e-02	exome+100bp flanks	2	35955546	...	53	170	237	1.474042e-06	4.728061e-06	6.591473e-06	-5.181018e+00	...	9	32223214	...	2.793017e-07
TCGA-UY-A9PB-01A-11D-A38G-08	742	723	19	521	2.560647e-02	coding only	1	28837673	...	196	470	681	6.796665e-06	1.629813e-05	2.361494e-05	-4.626813e+00	...	15	28781468	...	5.211687e-07
TCGA-UY-A9PD-01A-11D-A38G-08	369	358	11	272	2.981030e-02	coding only	1	28837673	...	83	238	337	2.878180e-06	8.253093e-06	1.168610e-05	-4.932330e+00	...	14	28781468	...	4.864241e-07
TCGA-UY-A9PE-01A-11D-A38G-08	276	269	7	211	2.536232e-02	coding only	1	28837673	...	56	197	261	1.941904e-06	6.831342e-06	9.050661e-06	-5.043320e+00	...	7	28781468	...	2.432121e-07
TCGA-UY-A9PF-01A-11D-A38G-08	597	584	13	424	2.177554e-02	coding only	1	28837673	...	151	394	558	5.236206e-06	1.366268e-05	1.934969e-05	-4.713326e+00	...	8	28781468	...	2.779566e-07
TCGA-UY-A9PH-01A-11D-A38G-08	474	461	13	328	2.742616e-02	coding only	1	28837673	...	124	294	425	4.299931e-06	1.019500e-05	1.473767e-05	-4.831571e+00	...	2	28781468	...	6.948916e-08
TCGA-XF-A8HH-01A-11D-A38G-08	145	139	6	88	4.137931e-02	exome+100bp flanks	2	35955546	...	49	80	133	1.362794e-06	2.224970e-06	3.699012e-06	-5.431914e+00	...	3	32223214	...	9.310058e-08
TCGA-XF-A8HI-01A-11D-A38G-08	109	104	5	70	4.587156e-02	exome+100bp flanks	2	35955546	...	33	58	98	9.178000e-07	1.613103e-06	2.725588e-06	-5.564540e+00	...	6	32223214	...	1.862012e-07
TCGA-XF-A9SG-01A-12D-A42E-08	253	244	9	183	3.557312e-02	exome+100bp flanks	2	35955546	...	59	171	235	1.640915e-06	4.755873e-06	6.535848e-06	-5.184698e+00	...	5	32223214	...	1.551676e-07
TCGA-XF-A9SH-01A-11D-A391-08	67	66	1	46	1.492537e-02	coding only	1	28837673	...	20	40	65	6.935372e-07	1.387074e-06	2.253996e-06	-5.647047e+00	...	4	28781468	...	1.389783e-07
TCGA-XF-A9SI-01A-11D-A391-08	514	501	13	372	2.529183e-02	coding only	1	28837673	...	126	358	488	4.369285e-06	1.241432e-05	1.692231e-05	-4.771540e+00	...	2	28781468	...	6.948916e-08
TCGA-XF-A9SJ-01A-11D-A391-08	388	377	11	271	2.835052e-02	coding only	1	28837673	...	101	244	353	3.502363e-06	8.461154e-06	1.224093e-05	-4.912186e+00	...	5	28781468	...	1.737229e-07
TCGA-XF-A9SK-01A-11D-A42E-08	186	179	7	139	3.763441e-02	exome+100bp flanks	2	35955546	...	40	127	173	1.112485e-06	3.532139e-06	4.811497e-06	-5.317720e+00	...	4	32223214	...	1.241341e-07
TCGA-XF-A9SL-01A-11D-A391-08	142	133	9	110	6.338028e-02	exome+100bp flanks	2	35955546	...	23	103	129	6.396788e-07	2.864648e-06	3.587764e-06	-5.445176e+00	...	1	32223214	...	3.103353e-08
TCGA-XF-A9SM-01A-11D-A42E-08	311	306	5	227	1.607717e-02	coding only	1	28837673	...	75	213	290	2.600765e-06	7.386172e-06	1.005629e-05	-4.997562e+00	...	2	28781468	...	6.948916e-08
TCGA-XF-A9SP-01A-11D-A391-08	406	400	6	293	1.477833e-02	coding only	1	28837673	...	103	271	379	3.571717e-06	9.397430e-06	1.314253e-05	-4.881321e+00	...	4	28781468	...	1.389783e-07
TCGA-XF-A9ST-01A-11D-A42E-08	703	689	14	538	1.991465e-02	coding only	1	28837673	...	146	488	664	5.062822e-06	1.692231e-05	2.302544e-05	-4.637792e+00	...	27	28781468	...	9.381036e-07
TCGA-XF-A9SU-01A-31D-A391-08	82	77	5	64	6.097561e-02	exome+100bp flanks	2	35955546	...	12	57	74	3.337455e-07	1.585291e-06	2.058097e-06	-5.686534e+00	...	4	32223214	...	1.241341e-07
TCGA-XF-A9SV-01A-21D-A42E-08	99	90	9	64	9.090909e-02	exome+100bp flanks	2	35955546	...	26	56	89	7.231151e-07	1.557479e-06	2.475279e-06	-5.606376e+00	...	5	32223214	...	1.551676e-07
TCGA-XF-A9SW-01A-11D-A42E-08	77	72	5	48	6.493506e-02	exome+100bp flanks	2	35955546	...	23	44	69	6.396788e-07	1.223733e-06	1.919036e-06	-5.716917e+00	...	2	32223214	...	6.206706e-08
TCGA-XF-A9SX-01A-21D-A391-08	159	150	9	119	5.660377e-02	exome+100bp flanks	2	35955546	...	29	106	145	8.065515e-07	2.948085e-06	4.032758e-06	-5.394398e+00	...	7	32223214	...	2.172347e-07
TCGA-XF-A9SY-01A-21D-A42E-08	573	562	11	422	1.919721e-02	coding only	1	28837673	...	130	395	532	4.507992e-06	1.369736e-05	1.844809e-05	-4.734049e+00	...	4	28781468	...	1.389783e-07
TCGA-XF-A9SZ-01A-11D-A391-08	276	273	3	217	1.086957e-02	coding only	1	28837673	...	56	198	266	1.941904e-06	6.866019e-06	9.224045e-06	-5.035079e+00	...	11	28781468	...	3.821904e-07
TCGA-XF-A9T0-01A-11D-A391-08	1003	977	26	697	2.592223e-02	coding only	1	28837673	...	269	644	942	9.328076e-06	2.233190e-05	3.266560e-05	-4.485909e+00	...	24	28781468	...	8.338699e-07
TCGA-XF-A9T2-01A-11D-A42E-08	120	113	7	83	5.833333e-02	exome+100bp flanks	2	35955546	...	30	75	110	8.343636e-07	2.085909e-06	3.059333e-06	-5.514373e+00	...	5	32223214	...	1.551676e-07
TCGA-XF-A9T3-01A-11D-A42E-08	518	506	12	362	2.316602e-02	coding only	1	28837673	...	132	333	480	4.577346e-06	1.154739e-05	1.664489e-05	-4.778719e+00	...	10	28781468	...	3.474458e-07
TCGA-XF-A9T4-01A-11D-A391-08	48	46	2	37	4.166667e-02	exome+100bp flanks	2	35955546	...	8	32	42	2.224970e-07	8.899879e-07	1.168109e-06	-5.932517e+00	...	2	32223214	...	6.206706e-08
TCGA-XF-A9T5-01A-11D-A42E-08	857	834	23	631	2.683781e-02	coding only	1	28837673	...	194	583	790	6.727311e-06	2.021661e-05	2.739472e-05	-4.562333e+00	...	6	28781468	...	2.084675e-07
TCGA-XF-A9T6-01A-11D-A42E-08	398	386	12	299	3.015075e-02	exome+100bp flanks	2	35955546	...	84	261	367	2.336218e-06	7.258964e-06	1.020705e-05	-4.991100e+00	...	17	32223214	...	5.275700e-07
TCGA-XF-A9T8-01A-11D-A391-08	903	882	21	658	2.325581e-02	coding only	1	28837673	...	212	597	825	7.351495e-06	2.070209e-05	2.860841e-05	-4.543506e+00	...	9	28781468	...	3.127012e-07
TCGA-XF-AAME-01A-12D-A42E-08	34	31	3	26	8.823529e-02	exome+100bp flanks	2	35955546	...	5	25	31	1.390606e-07	6.953030e-07	8.621758e-07	-6.064404e+00	...	1	32223214	...	3.103353e-08
TCGA-XF-AAMF-01A-21D-A42E-08	102	100	2	77	1.960784e-02	coding only	1	28837673	...	21	63	94	7.282141e-07	2.184642e-06	3.259625e-06	-5.486832e+00	...	9	28781468	...	3.127012e-07
TCGA-XF-AAMG-01A-11D-A42E-08	1215	1190	25	899	2.057613e-02	coding only	1	28837673	...	279	833	1127	9.674844e-06	2.888583e-05	3.908082e-05	-4.408036e+00	...	9	28781468	...	3.127012e-07
TCGA-XF-AAMH-01A-11D-A42E-08	84	82	2	60	2.380952e-02	coding only	1	28837673	...	20	53	77	6.935372e-07	1.837874e-06	2.670118e-06	-5.573469e+00	...	4	28781468	...	1.389783e-07
TCGA-XF-AAMJ-01A-11D-A42E-08	55	55	0	41	0	coding only	1	28837673	...	14	36	52	4.854761e-07	1.248367e-06	1.803197e-06	-5.743957e+00	...	2	28781468	...	6.948916e-08
TCGA-XF-AAML-01A-11D-A42E-08	618	606	12	453	1.941748e-02	coding only	1	28837673	...	148	419	578	5.132176e-06	1.452961e-05	2.004323e-05	-4.698032e+00	...	8	28781468	...	2.779566e-07
TCGA-XF-AAMQ-01A-11D-A42E-08	262	252	10	175	3.816794e-02	exome+100bp flanks	2	35955546	...	74	168	248	2.058097e-06	4.672436e-06	6.897406e-06	-5.161314e+00	...	2	32223214	...	6.206706e-08
TCGA-XF-AAMR-01A-31D-A42E-08	127	123	4	91	3.149606e-02	exome+100bp flanks	2	35955546	...	31	83	118	8.621758e-07	2.308406e-06	3.281830e-06	-5.483884e+00	...	3	32223214	...	9.310058e-08
TCGA-XF-AAMT-01A-11D-A42E-08	141	133	8	102	5.673759e-02	exome+100bp flanks	2	35955546	...	30	86	124	8.343636e-07	2.391842e-06	3.448703e-06	-5.462344e+00	...	7	32223214	...	2.172347e-07
TCGA-XF-AAMW-01A-11D-A42E-08	46	42	4	30	8.695652e-02	exome+100bp flanks	2	35955546	...	11	23	39	3.059333e-07	6.396788e-07	1.084673e-06	-5.964701e+00	...	4	32223214	...	1.241341e-07
TCGA-XF-AAMX-01A-11D-A42E-08	415	399	16	299	3.855422e-02	exome+100bp flanks	2	35955546	...	93	267	372	2.586527e-06	7.425836e-06	1.034611e-05	-4.985223e+00	...	9	32223214	...	2.793017e-07
TCGA-XF-AAMY-01A-11D-A42E-08	158	149	9	114	5.696203e-02	exome+100bp flanks	2	35955546	...	33	103	146	9.178000e-07	2.864648e-06	4.060570e-06	-5.391413e+00	...	8	32223214	...	2.482682e-07
TCGA-XF-AAMZ-01A-11D-A42E-08	355	349	6	280	1.690141e-02	coding only	1	28837673	...	64	270	341	2.219319e-06	9.362753e-06	1.182481e-05	-4.927206e+00	...	5	28781468	...	1.737229e-07
TCGA-XF-AAN0-01A-11D-A42E-08	525	513	12	398	2.285714e-02	coding only	1	28837673	...	105	374	484	3.641070e-06	1.296915e-05	1.678360e-05	-4.775115e+00	...	4	28781468	...	1.389783e-07
TCGA-XF-AAN1-01A-31D-A42E-08	114	111	3	77	2.631579e-02	coding only	1	28837673	...	34	71	109	1.179013e-06	2.462057e-06	3.779778e-06	-5.422534e+00	...	3	28781468	...	1.042337e-07
TCGA-XF-AAN2-01A-11D-A42E-08	586	556	30	411	5.119454e-02	exome+100bp flanks	2	35955546	...	135	380	529	3.754636e-06	1.056861e-05	1.471261e-05	-4.832310e+00	...	8	32223214	...	2.482682e-07
TCGA-XF-AAN3-01A-11D-A42E-08	218	208	10	146	4.587156e-02	exome+100bp flanks	2	35955546	...	59	134	200	1.640915e-06	3.726824e-06	5.562424e-06	-5.254736e+00	...	2	32223214	...	6.206706e-08
TCGA-XF-AAN4-01A-11D-A42E-08	85	81	4	66	4.705882e-02	exome+100bp flanks	2	35955546	...	15	63	78	4.171818e-07	1.752164e-06	2.169345e-06	-5.663671e+00	...	0	32223214	...	0
TCGA-XF-AAN5-01A-11D-A42E-08	401	388	13	303	3.241895e-02	exome+100bp flanks	2	35955546	...	81	278	376	2.252782e-06	7.731770e-06	1.045736e-05	-4.980578e+00	...	12	32223214	...	3.724023e-07
TCGA-XF-AAN7-01A-11D-A42E-08	187	180	7	135	3.743316e-02	exome+100bp flanks	2	35955546	...	43	122	178	1.195921e-06	3.393079e-06	4.950558e-06	-5.305346e+00	...	10	32223214	...	3.103353e-07
TCGA-XF-AAN8-01A-11D-A42E-08	6	5	1	4	1.666667e-01	exome+100bp flanks	2	35955546	...	1	4	5	2.781212e-08	1.112485e-07	1.390606e-07	-6.856796e+00	...	0	32223214	...	0
TCGA-YC-A8S6-01A-31D-A38G-08	138	130	8	104	5.797101e-02	exome+100bp flanks	2	35955546	...	25	94	124	6.953030e-07	2.614339e-06	3.448703e-06	-5.462344e+00	...	5	32223214	...	1.551676e-07
TCGA-YC-A9TC-01A-22D-A391-08	157	148	9	114	5.732484e-02	exome+100bp flanks	2	35955546	...	32	99	138	8.899879e-07	2.753400e-06	3.838073e-06	-5.415887e+00	...	7	32223214	...	2.172347e-07
TCGA-YF-AA3L-01A-11D-A38G-08	395	371	24	289	6.075949e-02	exome+100bp flanks	2	35955546	...	80	261	363	2.224970e-06	7.258964e-06	1.009580e-05	-4.995859e+00	...	18	32223214	...	5.586035e-07
TCGA-YF-AA3M-01A-11D-A42E-08	224	215	9	141	4.017857e-02	exome+100bp flanks	2	35955546	...	72	123	206	2.002473e-06	3.420891e-06	5.729297e-06	-5.241899e+00	...	10	32223214	...	3.103353e-07
TCGA-ZF-A9R0-01A-11D-A38G-08	256	248	8	180	3.125000e-02	exome+100bp flanks	2	35955546	...	67	167	242	1.863412e-06	4.644624e-06	6.730533e-06	-5.171951e+00	...	5	32223214	...	1.551676e-07
TCGA-ZF-A9R1-01A-11D-A391-08	129	122	7	93	5.426357e-02	exome+100bp flanks	2	35955546	...	27	85	121	7.509273e-07	2.364030e-06	3.365267e-06	-5.472981e+00	...	5	32223214	...	1.551676e-07
TCGA-ZF-A9R2-01A-11D-A391-08	194	188	6	141	3.092784e-02	exome+100bp flanks	2	35955546	...	45	130	180	1.251545e-06	3.615576e-06	5.006182e-06	-5.300493e+00	...	3	32223214	...	9.310058e-08
TCGA-ZF-A9R3-01A-11D-A38G-08	125	113	12	86	9.600000e-02	exome+100bp flanks	2	35955546	...	26	73	109	7.231151e-07	2.030285e-06	3.031521e-06	-5.518339e+00	...	6	32223214	...	1.862012e-07
TCGA-ZF-A9R4-01A-11D-A38G-08	314	301	13	232	4.140127e-02	exome+100bp flanks	2	35955546	...	67	214	284	1.863412e-06	5.951794e-06	7.898642e-06	-5.102448e+00	...	3	32223214	...	9.310058e-08
TCGA-ZF-A9R5-01A-12D-A42E-08	131	127	4	102	3.053435e-02	exome+100bp flanks	2	35955546	...	24	84	121	6.674909e-07	2.336218e-06	3.365267e-06	-5.472981e+00	...	9	32223214	...	2.793017e-07
TCGA-ZF-A9R7-01A-11D-A38G-08	862	840	22	643	2.552204e-02	coding only	1	28837673	...	187	596	798	6.484573e-06	2.066741e-05	2.767214e-05	-4.557957e+00	...	3	28781468	...	1.042337e-07
TCGA-ZF-A9R9-01A-11D-A38G-08	259	248	11	189	4.247104e-02	exome+100bp flanks	2	35955546	...	56	173	236	1.557479e-06	4.811497e-06	6.563661e-06	-5.182854e+00	...	5	32223214	...	1.551676e-07
TCGA-ZF-A9RC-01A-11D-A38G-08	1257	1239	18	881	1.431981e-02	coding only	1	28837673	...	335	814	1168	1.161675e-05	2.822697e-05	4.050257e-05	-4.392517e+00	...	15	28781468	...	5.211687e-07
TCGA-ZF-A9RD-01A-11D-A42E-08	229	223	6	158	2.620087e-02	coding only	1	28837673	...	63	150	214	2.184642e-06	5.201529e-06	7.420848e-06	-5.129546e+00	...	1	28781468	...	3.474458e-08
TCGA-ZF-A9RE-01A-11D-A38G-08	99	95	4	76	4.040404e-02	exome+100bp flanks	2	35955546	...	17	64	89	4.728061e-07	1.779976e-06	2.475279e-06	-5.606376e+00	...	7	32223214	...	2.172347e-07
TCGA-ZF-A9RF-01A-11D-A38G-08	315	304	11	239	3.492063e-02	exome+100bp flanks	2	35955546	...	63	217	298	1.752164e-06	6.035230e-06	8.288012e-06	-5.081550e+00	...	11	32223214	...	3.413688e-07
TCGA-ZF-A9RG-01A-21D-A42E-08	304	298	6	215	1.973684e-02	coding only	1	28837673	...	80	204	288	2.774149e-06	7.074080e-06	9.986936e-06	-5.000568e+00	...	3	28781468	...	1.042337e-07
TCGA-ZF-A9RL-01A-11D-A38G-08	436	417	19	331	4.357798e-02	exome+100bp flanks	2	35955546	...	85	314	410	2.364030e-06	8.733006e-06	1.140297e-05	-4.942982e+00	...	4	32223214	...	1.241341e-07
TCGA-ZF-A9RM-01A-11D-A38G-08	119	115	4	92	3.361345e-02	exome+100bp flanks	2	35955546	...	21	87	113	5.840545e-07	2.419655e-06	3.142770e-06	-5.502687e+00	...	3	32223214	...	9.310058e-08
TCGA-ZF-A9RN-01A-11D-A42E-08	251	242	9	176	3.585657e-02	exome+100bp flanks	2	35955546	...	64	163	233	1.779976e-06	4.533376e-06	6.480224e-06	-5.188410e+00	...	4	32223214	...	1.241341e-07
TCGA-ZF-AA4N-01A-11D-A38G-08	205	199	6	156	2.926829e-02	coding only	1	28837673	...	42	144	193	1.456428e-06	4.993468e-06	6.692634e-06	-5.174403e+00	...	5	28781468	...	1.737229e-07
TCGA-ZF-AA4R-01A-11D-A38G-08	95	93	2	75	2.105263e-02	coding only	1	28837673	...	18	66	91	6.241835e-07	2.288673e-06	3.155594e-06	-5.500919e+00	...	7	28781468	...	2.432121e-07
TCGA-ZF-AA4T-01A-11D-A38G-08	130	126	4	96	3.076923e-02	exome+100bp flanks	2	35955546	...	28	84	120	7.787394e-07	2.336218e-06	3.337455e-06	-5.476585e+00	...	7	32223214	...	2.172347e-07
TCGA-ZF-AA4U-01A-11D-A38G-08	83	81	2	58	2.409639e-02	coding only	1	28837673	...	23	55	82	7.975678e-07	1.907227e-06	2.843503e-06	-5.546146e+00	...	3	28781468	...	1.042337e-07
TCGA-ZF-AA4V-01A-11D-A38G-08	860	838	22	600	2.558140e-02	coding only	1	28837673	...	219	547	792	7.594233e-06	1.896824e-05	2.746407e-05	-4.561235e+00	...	15	28781468	...	5.211687e-07
TCGA-ZF-AA4W-01A-12D-A38G-08	704	680	24	526	3.409091e-02	exome+100bp flanks	2	35955546	...	147	436	651	4.088382e-06	1.212608e-05	1.810569e-05	-4.742185e+00	...	62	32223214	...	1.924079e-06
TCGA-ZF-AA4X-01A-11D-A38G-08	834	822	12	611	1.438849e-02	coding only	1	28837673	...	202	577	791	7.004726e-06	2.000855e-05	2.742940e-05	-4.561784e+00	...	3	28781468	...	1.042337e-07
TCGA-ZF-AA51-01A-21D-A391-08	863	836	27	636	3.128621e-02	exome+100bp flanks	2	35955546	...	188	584	790	5.228679e-06	1.624228e-05	2.197158e-05	-4.658139e+00	...	11	32223214	...	3.413688e-07
TCGA-ZF-AA52-01A-12D-A391-08	161	156	5	116	3.105590e-02	exome+100bp flanks	2	35955546	...	39	106	150	1.084673e-06	2.948085e-06	4.171818e-06	-5.379675e+00	...	4	32223214	...	1.241341e-07
TCGA-ZF-AA53-01A-11D-A391-08	230	226	4	168	1.739130e-02	coding only	1	28837673	...	53	154	212	1.837874e-06	5.340237e-06	7.351495e-06	-5.133624e+00	...	5	28781468	...	1.737229e-07
TCGA-ZF-AA54-01A-11D-A391-08	235	229	6	183	2.553191e-02	coding only	1	28837673	...	46	172	224	1.595136e-06	5.964420e-06	7.767617e-06	-5.109712e+00	...	5	28781468	...	1.737229e-07
TCGA-ZF-AA56-01A-31D-A391-08	131	128	3	101	2.290076e-02	coding only	1	28837673	...	27	95	125	9.362753e-07	3.294302e-06	4.334608e-06	-5.363050e+00	...	3	28781468	...	1.042337e-07
TCGA-ZF-AA58-01A-12D-A42E-08	275	271	4	211	1.454545e-02	coding only	1	28837673	...	57	200	258	1.976581e-06	6.935372e-06	8.946630e-06	-5.048341e+00	...	1	28781468	...	3.474458e-08
TCGA-ZF-AA5H-01A-11D-A391-08	90	84	6	59	6.666667e-02	exome+100bp flanks	2	35955546	...	25	54	81	6.953030e-07	1.501855e-06	2.252782e-06	-5.647281e+00	...	2	32223214	...	6.206706e-08
TCGA-ZF-AA5N-01A-11D-A42E-08	72	71	1	57	1.388889e-02	coding only	1	28837673	...	11	42	62	3.814455e-07	1.456428e-06	2.149965e-06	-5.667569e+00	...	8	28781468	...	2.779566e-07
TCGA-ZF-AA5P-01A-11D-A391-08	88	77	11	58	1.250000e-01	exome+100bp flanks	2	35955546	...	19	53	76	5.284303e-07	1.474042e-06	2.113721e-06	-5.674952e+00	...	2	32223214	...	6.206706e-08
