gene1	gene2	pval	qval
Del_3p14.2	Del_11p15.1	0.000104	1
Del_5q12.1	Del_11p15.1	0.000104	1
Del_6p24.2	Del_6q26	0.000105	1
Del_4q35.2	Del_5q35.2	0.000132	1
18q-Del	Del_20p12.1	0.000135	1
5q-Del	Del_11p15.1	0.000136	1
17p-Del	4p-Del	0.000138	1
1p-Amp	Amp_1q44	0.00014	1
Del_2q37.1	Del_7q34	0.000143	1
11p-Del	Del_11q23.3	0.00015	1
11p-Del	Del_3p14.2	0.000152	1
6q-Del	Del_2q37.1	0.000172	1
3q-Amp	Amp_20q11.21	0.000187	1
17p-Del	Del_3p14.2	0.000193	1
Del_4q21.3	Del_5q12.1	0.000194	1
3p-Del	Del_5q12.1	0.000218	1
Del_5q12.1	Del_13q12.11	0.000218	1
17p-Del	Del_11p15.1	0.000232	1
11p-Del	Del_11q25	0.000249	1
3p-Del	5q-Del	0.00025	1
3p-Del	6q-Del	0.00025	1
5q-Del	Del_13q12.11	0.00025	1
4q-Del	Del_7q34	0.000289	1
HLA-A	ZNF750	0.000299	1
Del_18q21.2	Del_20p12.1	0.000301	1
Del_2q37.1	Del_11p15.1	0.000302	1
5p-Amp	Amp_19q13.13	0.000322	1
4q-Del	5q-Del	0.000327	1
5q-Del	Del_4q22.1	0.000327	1
4p-Del	5q-Del	0.000333	1
Del_3p14.2	Del_6q26	0.00034	1
11p-Del	Del_17p12	0.000417	1
4q-Del	Del_5q35.2	0.000419	1
Del_4q22.1	Del_5q35.2	0.000419	1
Del_3p14.2	Del_4q21.3	0.000428	1
8p-Del	Amp_11q13.3	0.000496	1
11p-Del	Del_2q37.1	0.000508	1
17p-Del	3p-Del	0.00051	1
18q-Del	Del_17p12	0.000554	1
Amp_1q44	Amp_16p13.13	0.000554	1
Del_3p14.2	Del_5q12.1	0.000585	1
BAP1	3p-Del	0.000586	1
BAP1	Del_6q26	0.000586	1
4q-Del	Del_3p14.2	0.000586	1
ZNF750	Del_17q25.3	0.000588	1
4q-Del	Del_5q12.1	0.000592	1
Del_4q22.1	Del_5q12.1	0.000592	1
Amp_3q28	Del_11q23.3	0.00068	1
4p-Del	Del_7q34	0.000707	1
3p-Del	Del_6q26	0.000744	1
Amp_3q26.31	Amp_20q11.21	0.000762	1
5q-Del	Del_3p14.2	0.000786	1
6q-Del	Del_3p14.2	0.000786	1
20p-Amp	3q-Amp	0.00079	1
Amp_3q28	Del_11q25	0.000801	1
3p-Del	Del_5q35.2	0.000819	1
Del_5q35.2	Del_13q12.11	0.000819	1
PTEN	10q-Del	0.000885	1
Del_4q21.3	Del_5q35.2	0.000962	1
Del_11p15.1	Del_11q25	0.000971	1
Del_1p36.23	Del_19q13.33	0.000974	1
Del_17p12	Del_20p12.1	0.00101	1
HLA-B	Del_17q25.3	0.00102	1
20p-Amp	Amp_3q26.31	0.00103	1
18q-Del	Del_16q11.2	0.00104	1
FAT2	ZNF750	0.00107	1
Del_2q37.1	Del_3p14.2	0.00107	1
Del_4q21.3	Del_11p15.1	0.00107	1
ARID1A	TRIM9	0.00109	1
TRIM9	Amp_15q26.1	0.00109	1
5q-Del	Del_2q37.1	0.00113	1
Xp-Del	Del_Xp11.3	0.00116	1
20p-Amp	Amp_3q28	0.00124	1
Del_4q35.2	Del_5q12.1	0.00125	1
10q-Del	Del_15q21.1	0.00133	1
Amp_3q26.31	Del_11q23.3	0.0014	1
Del_5q35.2	Del_7q34	0.0014	1
Amp_1q21.3	Amp_13q34	0.00146	1
HLA-A	TRIM9	0.00147	1
Del_10q23.31	Del_15q21.1	0.00148	1
11p-Del	Del_4q22.1	0.0015	1
1p-Amp	3q-Amp	0.00153	1
HLA-B	MED1	0.00163	1
Amp_17q12	Amp_17q25.1	0.00165	1
Del_17p12	Del_18q21.2	0.00169	1
3p-Del	Del_11p15.1	0.0017	1
Amp_1q21.3	Amp_16p13.13	0.0017	1
Del_11p15.1	Del_13q12.11	0.0017	1
5q-Del	Del_4q35.2	0.00172	1
Del_4q21.3	Del_10q23.31	0.00185	1
Del_5q12.1	Del_7q34	0.00194	1
13q-Del	Del_5q35.2	0.00195	1
PIK3CA	SEMA4B	0.00202	1
Amp_13q22.1	Del_2q37.1	0.00208	1
Amp_8q24.21	Del_2q37.1	0.00217	1
Del_16q11.2	Del_18q21.2	0.00219	1
10q-Del	Del_1p36.23	0.00221	1
4p-Del	Amp_5p15.33	0.00222	1
4p-Del	Del_3p14.2	0.00222	1
Del_2q37.1	Del_5q12.1	0.00228	1
Del_13q12.11	Del_17p12	0.00229	1
Del_11p15.1	Del_11q23.3	0.00235	1
NFE2L2	FAT2	0.00238	1
FAT2	NHS	0.00238	1
17p-Del	Del_13q12.11	0.00239	1
8p-Del	Amp_20q11.21	0.00242	1
CASP8	HLA-A	0.00251	1
HLA-A	RB1	0.00251	1
Amp_7p11.2	Amp_11q22.1	0.00251	1
4q-Del	Del_11p15.1	0.00257	1
MED1	SMAD4	0.00262	1
20q-Amp	3q-Amp	0.00272	1
Amp_13q22.1	Del_13q12.11	0.00274	1
Amp_Xq28	Del_2q22.1	0.00282	1
Amp_5p15.33	Del_4q22.1	0.00297	1
Del_3p14.2	Del_6p24.2	0.00297	1
3q-Amp	Del_11q23.3	0.00303	1
MUC4	PIK3CA	0.00304	1
1q-Amp	Amp_13q34	0.00312	1
Del_2q37.1	Del_6q26	0.00313	1
Del_8p23.1	Del_11p15.1	0.00315	1
Amp_3q28	Amp_20q11.21	0.00322	1
3q-Amp	Amp_1p31.3	0.00325	1
EP300	MUC4	0.0033	1
Del_2q37.1	Del_20p12.1	0.0033	1
Amp_1q44	Amp_13q34	0.00331	1
Del_16q11.2	Del_20p12.1	0.00336	1
19p-Del	3q-Del	0.00341	1
Del_3p14.2	Del_17p12	0.00354	1
Del_2q37.1	Del_6p24.2	0.00361	1
11p-Del	3p-Del	0.00376	1
10q-Del	4q-Del	0.00378	1
10q-Del	Del_4q22.1	0.00378	1
Amp_13q22.1	Del_6p24.2	0.00378	1
11p-Del	6q-Del	0.00381	1
3p-Del	3q-Del	0.00393	1
Amp_8q24.21	Amp_13q34	0.00397	1
3p-Del	Del_6p24.2	0.00418	1
4q-Del	Del_13q12.11	0.00418	1
Amp_3q26.31	Del_11q25	0.00419	1
MUC4	Del_17q25.3	0.0042	1
Amp_11q13.3	Del_8p23.1	0.0042	1
SEMA4B	Del_17p12	0.00432	1
3p-Del	4p-Del	0.00447	1
Amp_7p11.2	Amp_11q13.3	0.00452	1
FAT2	8p-Del	0.00466	1
EP300	Amp_21q22.13	0.00475	1
BAP1	IDS	0.00482	1
Amp_1q21.3	Amp_2p24.3	0.00489	1
4q-Del	Del_10q23.31	0.00493	1
Del_4q22.1	Del_10q23.31	0.00493	1
Del_3p14.2	Del_4q35.2	0.00496	1
Del_4q22.1	Del_17p12	0.00498	1
Del_8p23.3	Del_17q25.3	0.00513	1
10q-Del	Del_19q13.33	0.00526	1
PTEN	8q-Amp	0.00528	1
Amp_11p12	Del_11p15.1	0.00529	1
MUC4	Del_11p15.1	0.00549	1
ARID1A	SMAD4	0.00557	1
1q-Amp	3q-Amp	0.00562	1
Amp_5p15.33	Amp_6p21.33	0.00565	1
Amp_13q34	Del_13q14.2	0.00576	1
3q-Amp	Del_11q25	0.0058	1
Del_2q37.1	Del_5q35.2	0.0058	1
HLA-B	MUC4	0.00584	1
17p-Del	Del_11q25	0.00595	1
HLA-A	HLA-B	0.00597	1
HLA-A	FAT2	0.00597	1
Amp_17q25.1	Del_11q23.3	0.00597	1
6q-Del	Del_11p15.1	0.00602	1
Amp_8q24.21	Del_8p23.1	0.00606	1
Del_3p14.2	Del_5q35.2	0.00606	1
PTEN	Del_10q23.31	0.00615	1
3q-Amp	Amp_16p13.13	0.00623	1
5q-Del	Del_7q34	0.00627	1
Del_5q35.2	Del_17p12	0.0064	1
11p-Del	Del_5q35.2	0.00648	1
4q-Del	Del_13q14.2	0.00652	1
SEMA4B	USP28	0.0067	1
3q-Amp	Amp_5p15.33	0.0067	1
10q-Del	Del_4q21.3	0.00671	1
18q-Del	Del_16q23.1	0.00671	1
Amp_2q33.1	Del_8p23.3	0.00682	1
Amp_11q13.3	Del_8p23.3	0.00682	1
ANKRD12	HLA-A	0.00687	1
ERBB3	TRIM9	0.00687	1
HLA-B	TRIM9	0.00687	1
FAT2	TRIM9	0.00687	1
Amp_13q34	Amp_16p13.13	0.00697	1
Del_2q37.1	Del_11q25	0.00698	1
Del_8p23.3	Del_11p15.1	0.0071	1
13q-Del	Del_3p14.2	0.00729	1
Amp_13q22.1	Del_3p14.2	0.00729	1
20q-Amp	Amp_3q26.31	0.0074	1
ERBB2	RB1	0.00743	1
8q-Amp	Xp-Del	0.0075	1
Del_17q25.3	Del_Xq21.33	0.0075	1
EP300	RB1	0.00796	1
EP300	TP53	0.00796	1
Del_5q35.2	Del_17q25.3	0.00803	1
Del_11q23.3	Del_17p12	0.00809	1
Amp_2p24.3	Amp_15q26.1	0.00821	1
3p-Del	Del_17p12	0.00824	1
HLA-A	NFE2L2	0.00852	1
10q-Del	Del_7q34	0.00869	1
8p-Del	Amp_3q28	0.00875	1
11p-Del	Del_5q12.1	0.00877	1
20q-Amp	Amp_3q28	0.00878	1
10q-Del	Del_11p15.1	0.00879	1
Del_4q21.3	Del_13q12.11	0.00881	1
Del_6q26	Del_16q23.1	0.00881	1
3q-Amp	Amp_1q44	0.00892	1
Del_8p23.1	Del_20p12.1	0.00894	1
Amp_1p31.3	Amp_1q44	0.00895	1
Del_2q22.1	Del_2q37.1	0.00908	1
20q-Amp	Amp_17q25.1	0.00911	1
11q-Del	Amp_3q28	0.00922	1
Amp_3q28	Del_8p23.3	0.00922	1
EP300	Amp_8q24.21	0.00929	1
Amp_5p15.33	Del_5q12.1	0.00953	1
5q-Del	Del_17q25.3	0.00971	1
Amp_17q25.1	Del_17q25.3	0.00971	1
FAT2	Del_17q25.3	0.00977	1
5p-Amp	Amp_6p21.33	0.00987	1
ERBB3	RB1	0.00997	1
IDS	6q-Del	0.01	1
Del_14q32.31	Del_16q11.2	0.0103	1
MUC4	11p-Del	0.0105	1
Amp_1q21.3	Amp_19q13.13	0.0106	1
Del_3p14.2	Del_13q14.2	0.0107	1
1q-Amp	Amp_16p13.13	0.0108	1
STK11	SEMA4B	0.011	1
18q-Del	8p-Del	0.0111	1
Del_2q37.1	Del_11q23.3	0.0111	1
4p-Del	Del_17p12	0.0112	1
TP53	C12orf43	0.0113	1
TP53	USP28	0.0113	1
11p-Del	17p-Del	0.0113	1
CASP8	MUC4	0.0114	1
MUC4	RB1	0.0114	1
Amp_Xq28	Del_Xp11.3	0.0114	1
Del_2q22.1	Del_Xp11.3	0.0114	1
Del_10q23.31	Del_11q23.3	0.0114	1
EP300	Amp_13q34	0.0115	1
HLA-B	PIK3CA	0.0115	1
FBXW7	ZNF578	0.0119	1
ZNF578	Amp_13q22.1	0.0119	1
Amp_11p12	Amp_13q22.1	0.0119	1
Del_16q23.1	Del_18q21.2	0.0121	1
17p-Del	Del_11q23.3	0.0122	1
3p-Del	Del_4q35.2	0.0122	1
3p-Del	Del_13q12.11	0.0122	1
Del_6q26	Del_13q12.11	0.0122	1
Del_7q34	Del_13q12.11	0.0122	1
EP300	ERBB2	0.0124	1
SEMA4B	17p-Del	0.0125	1
Amp_17q25.1	Amp_20q11.21	0.0125	1
Del_11q25	Del_17p12	0.0125	1
MUC4	Del_2q37.1	0.0126	1
Amp_1p31.3	Amp_19q13.13	0.0126	1
Del_7q34	Del_10q23.31	0.0126	1
13q-Del	5q-Del	0.0127	1
Del_10q23.31	Del_13q14.2	0.0128	1
10q-Del	Del_4q35.2	0.0132	1
3p-Del	Amp_7p11.2	0.0132	1
3p-Del	Amp_13q22.1	0.0132	1
Del_10q23.31	Del_17p12	0.0132	1
Del_8p23.1	Del_17q25.3	0.0133	1
17p-Del	Del_5q35.2	0.0134	1
Del_4q21.3	Del_13q14.2	0.0134	1
Del_13q14.2	Del_16q23.1	0.0134	1
ERBB2	ERBB3	0.0138	1
HLA-B	ZNF750	0.0138	1
MED1	ZNF750	0.0138	1
13q-Del	Del_5q12.1	0.0139	1
C3orf70	20q-Amp	0.014	1
Amp_7p11.2	Del_3p14.2	0.014	1
ERBB2	USP28	0.0141	1
ARID1A	MTOR	0.0142	1
Amp_5p15.33	Amp_8q24.21	0.0143	1
11p-Del	Del_6q26	0.0144	1
4p-Del	Del_2q37.1	0.0144	1
TCTE1	TRIM9	0.0145	1
Del_2q37.1	Del_4q22.1	0.0146	1
TCTE1	Del_5q12.1	0.0149	1
11p-Del	Del_4q21.3	0.015	1
Del_8p23.1	Del_17p12	0.015	1
1p-Amp	5p-Amp	0.0151	1
1p-Amp	Amp_3q26.31	0.0152	1
17p-Del	4q-Del	0.0152	1
17p-Del	Del_4q22.1	0.0152	1
EP300	1p-Amp	0.0155	1
17p-Del	Del_8p23.1	0.0155	1
17p-Del	Del_13q14.2	0.0155	1
ARID1A	HLA-A	0.0156	1
ARID1A	8p-Del	0.0156	1
8p-Del	Amp_15q26.1	0.0156	1
Amp_6p21.33	Amp_15q26.1	0.0156	1
ARID1A	PIK3CA	0.0159	1
Amp_1q44	Amp_6p21.33	0.0159	1
ZNF578	SEMA4B	0.0162	1
Amp_11p12	Del_Xp11.3	0.0162	1
8q-Amp	Del_Xp11.3	0.0165	1
13q-Del	Amp_13q22.1	0.0165	1
Del_5q35.2	Del_10q23.31	0.0165	1
20q-Amp	8p-Del	0.0166	1
1p-Amp	Amp_3q28	0.0169	1
Amp_9p24.1	Del_3p14.2	0.0169	1
Amp_1q21.3	Amp_21q22.13	0.017	1
FAT2	USP28	0.0171	1
MTOR	PTEN	0.0174	1
17p-Del	Del_5q12.1	0.0178	1
NFE2L2	ZNF750	0.0179	1
NHS	ZNF750	0.0179	1
ARID1A	Del_8p23.1	0.0182	1
FAT2	MED1	0.0183	1
Amp_1q21.3	Amp_5p15.33	0.0183	1
RB1	TCTE1	0.0184	1
3p-Del	4q-Del	0.0184	1
3p-Del	Del_4q22.1	0.0184	1
Amp_11q22.1	Del_11q25	0.0184	1
Del_4q22.1	Del_13q12.11	0.0184	1
ERBB3	20q-Amp	0.0186	1
IDS	Del_16q11.2	0.0186	1
20p-Amp	Del_4q22.1	0.0186	1
Del_10q23.31	Del_11p15.1	0.0187	1
MUC4	Amp_1p31.3	0.0188	1
11p-Del	5q-Del	0.0188	1
11p-Del	Del_17q25.3	0.0188	1
18q-Del	Del_8p23.1	0.019	1
3q-Amp	Amp_1q21.3	0.0192	1
3q-Del	Del_3p14.2	0.0193	1
Amp_5p15.33	Amp_17q12	0.0193	1
Del_16q23.1	Del_20p12.1	0.0193	1
Amp_13q34	Del_13q12.11	0.0194	1
8p-Del	Del_18q21.2	0.0195	1
Del_2q37.1	Del_8p23.1	0.0195	1
Del_11p15.1	Del_20p12.1	0.0196	1
MUC4	ZNF750	0.0198	1
4q-Del	Del_17p12	0.0199	1
8p-Del	Del_2q37.1	0.0201	1
NFE2L2	C12orf43	0.0203	1
NHS	USP28	0.0203	1
Amp_5p15.33	Del_5q35.2	0.0203	1
Amp_6p21.33	Amp_13q34	0.0203	1
EP300	Amp_1p31.3	0.0205	1
EP300	Del_17q25.3	0.0205	1
Amp_2p24.3	Amp_17q25.1	0.0205	1
11q-Del	Amp_3q26.31	0.0206	1
1p-Amp	Amp_21q22.13	0.021	1
Del_1p36.23	Del_4q22.1	0.021	1
13q-Del	4q-Del	0.0211	1
13q-Del	Del_4q22.1	0.0211	1
SMAD4	TRIM9	0.0212	1
20p-Amp	Amp_19q13.13	0.0212	1
Amp_6p21.33	Amp_11q22.1	0.0215	1
Del_4q21.3	Del_11q25	0.0215	1
Del_11q25	Del_16q11.2	0.0215	1
20p-Amp	Del_4q35.2	0.022	1
11q-Del	Del_13q14.2	0.022	1
5p-Amp	Amp_17q25.1	0.0221	1
Amp_2q33.1	Del_2q37.1	0.0223	1
Amp_9p24.1	Del_11q23.3	0.0227	1
4q-Del	Del_Xp11.3	0.0228	1
Del_4q22.1	Del_Xp11.3	0.0228	1
NFE2L2	Amp_20q11.21	0.0231	1
1q-Amp	Amp_19q13.13	0.0232	1
17p-Del	Del_20p12.1	0.0232	1
TP53	Amp_20q11.21	0.0233	1
Amp_20q11.21	Del_8p23.1	0.0233	1
Del_2q22.1	Del_3p14.2	0.0236	1
HLA-B	NFE2L2	0.0237	1
NFE2L2	MED1	0.0237	1
17p-Del	Del_Xq21.33	0.024	1
Amp_5p15.33	Del_2q37.1	0.0241	1
Del_4q35.2	Del_11p15.1	0.0241	1
Del_6q26	Del_11p15.1	0.0241	1
Amp_2q33.1	Del_8p23.1	0.0244	1
Amp_11q13.3	Del_13q14.2	0.0244	1
Amp_9p24.1	Amp_15q26.1	0.0249	1
Del_4q22.1	Del_11q25	0.0249	1
TRIM9	Amp_9p24.1	0.025	1
5q-Del	Amp_21q22.13	0.025	1
Amp_1p31.3	Amp_21q22.13	0.025	1
Amp_2p24.3	Del_4q35.2	0.025	1
8p-Del	Del_16q11.2	0.0251	1
Amp_21q22.13	Del_13q12.11	0.0251	1
8p-Del	Amp_3q26.31	0.0252	1
Del_4q35.2	Del_17p12	0.0252	1
Del_6q26	Del_17p12	0.0252	1
6q-Del	Del_16q11.2	0.0254	1
6q-Del	Del_16q23.1	0.0254	1
1p-Amp	Amp_13q34	0.0257	1
3p-Del	Del_11q25	0.0258	1
Del_4q35.2	Del_11q25	0.0258	1
Del_4q22.1	Del_13q14.2	0.0263	1
Amp_2p24.3	Amp_16p13.13	0.0264	1
Amp_5p15.33	Amp_13q22.1	0.0266	1
HLA-A	PIK3CA	0.0267	1
PIK3CA	PTEN	0.0267	1
ANKRD12	PTPRC	0.0269	1
RB1	ZNF578	0.0269	1
Del_11p15.1	Del_17q25.3	0.027	1
HLA-B	TCTE1	0.0275	1
FAT2	TCTE1	0.0275	1
20q-Amp	Amp_17q12	0.0281	1
ARID1A	Del_8p23.3	0.0282	1
Amp_15q26.1	Del_8p23.3	0.0282	1
CASP8	3q-Amp	0.0285	1
MAPK1	3q-Amp	0.0285	1
20q-Amp	Amp_19q13.13	0.0285	1
Del_4q35.2	Del_10q23.31	0.0285	1
Del_10q23.31	Del_13q12.11	0.0285	1
8q-Amp	Del_11q25	0.0287	1
Amp_17q25.1	Del_11q25	0.0287	1
ERBB2	PIK3CA	0.0291	1
TRIM9	Amp_16p13.13	0.0294	1
USP28	Amp_8q24.21	0.0295	1
Amp_1q21.3	Amp_13q22.1	0.0295	1
Amp_3q28	Del_8p23.1	0.0296	1
Del_2q37.1	Del_4q35.2	0.0297	1
Del_2q37.1	Del_13q12.11	0.0297	1
Amp_2p24.3	Amp_3q26.31	0.0298	1
TP53	Del_15q21.1	0.0299	1
4p-Del	Del_11p15.1	0.0299	1
8p-Del	Amp_2q33.1	0.03	1
Amp_11q13.3	Amp_11q22.1	0.03	1
Del_1p36.23	Del_4q21.3	0.0301	1
17p-Del	Del_4q35.2	0.0304	1
10q-Del	Amp_7p11.2	0.0306	1
18q-Del	Del_14q32.31	0.0306	1
Amp_7p11.2	Amp_13q22.1	0.0306	1
Amp_15q26.1	Amp_16p13.13	0.0306	1
20p-Amp	Amp_1q44	0.0307	1
Del_5q12.1	Del_17p12	0.0307	1
Amp_6p21.33	Amp_19q13.13	0.0309	1
20p-Amp	Del_4q21.3	0.031	1
18q-Del	Del_8p23.3	0.031	1
Del_2q37.1	Del_4q21.3	0.0311	1
Del_2q37.1	Del_16q11.2	0.0311	1
Del_11q23.3	Del_18q21.2	0.0311	1
MUC4	FAT2	0.0314	1
C3orf70	Amp_20q11.21	0.0316	1
HLA-A	C12orf43	0.0316	1
C12orf43	Amp_13q34	0.0316	1
RAB35	Amp_20q11.21	0.0316	1
USP28	Amp_13q34	0.0316	1
Amp_1q21.3	Amp_6p21.33	0.0317	1
1q-Amp	Amp_17q25.1	0.0319	1
17p-Del	5q-Del	0.0319	1
17p-Del	Del_17q25.3	0.0319	1
8q-Amp	Amp_6p21.33	0.032	1
8q-Amp	Amp_13q34	0.032	1
6q-Del	Del_2q22.1	0.032	1
Amp_1p31.3	Amp_13q34	0.032	1
Amp_17q25.1	Amp_Xq28	0.032	1
11q-Del	Del_17p12	0.0322	1
13q-Del	Del_4q21.3	0.0326	1
13q-Del	Del_16q23.1	0.0326	1
NFE2L2	TCTE1	0.0327	1
Del_2q22.1	Del_11q25	0.0329	1
3p-Del	Del_4q21.3	0.0331	1
Del_6q26	Del_16q11.2	0.0331	1
ERBB2	ZNF578	0.0332	1
ERBB2	IDS	0.0332	1
ZNF578	ZNF750	0.0332	1
Amp_2p24.3	Amp_3q28	0.0333	1
11p-Del	4q-Del	0.0335	1
ERBB2	Amp_13q34	0.0339	1
5q-Del	Del_17p12	0.0344	1
Amp_1q44	Amp_17q25.1	0.0344	1
4p-Del	Del_10q23.31	0.0346	1
ERBB3	20p-Amp	0.0349	1
Amp_1q21.3	Amp_3q26.31	0.0351	1
Amp_11q13.3	Del_11q23.3	0.0353	1
Del_8p23.1	Del_18q21.2	0.0353	1
11q-Del	Amp_11q13.3	0.0354	1
Del_1p36.23	Del_7q34	0.0354	1
Del_17q25.3	Del_19q13.33	0.0354	1
5p-Amp	Amp_1q21.3	0.0356	1
USP28	Del_15q21.1	0.0359	1
17p-Del	Del_7q34	0.0359	1
Amp_8q24.21	Del_Xp11.3	0.0361	1
MUC4	Del_4q22.1	0.0363	1
ARID1A	ERBB3	0.0366	1
ARID1A	HLA-B	0.0366	1
ARID1A	KRAS	0.0366	1
ARID1A	FAT2	0.0366	1
NFE2L2	Del_8p23.1	0.0366	1
Amp_2q33.1	Amp_15q26.1	0.0366	1
22q-Del	Del_1p13.2	0.0368	1
4p-Del	Del_11q25	0.0369	1
1p-Amp	Amp_5p15.33	0.0371	1
10q-Del	Del_11q23.3	0.0371	1
8q-Amp	Del_13q12.11	0.0373	1
5q-Del	Del_6q26	0.0373	1
Amp_17q25.1	Del_5q35.2	0.0374	1
Del_8p23.1	Del_11q23.3	0.0377	1
Amp_1q21.3	Del_11p15.1	0.0378	1
Amp_19q13.13	Del_4q21.3	0.0378	1
Del_4q35.2	Del_13q12.11	0.0379	1
8p-Del	Del_11p15.1	0.0382	1
Del_4q21.3	Del_17p12	0.0384	1
MTOR	MUC4	0.0387	1
MUC4	TRIM9	0.0387	1
3q-Del	8p-Del	0.0387	1
SEMA4B	8p-Del	0.0389	1
19p-Del	8p-Del	0.0389	1
Amp_1q44	Amp_20q11.21	0.039	1
13q-Del	Amp_6p21.33	0.0392	1
13q-Del	Amp_13q34	0.0392	1
Amp_6p21.33	Amp_13q22.1	0.0392	1
Amp_13q22.1	Del_2q22.1	0.0392	1
Amp_2p24.3	Amp_21q22.13	0.0393	1
19p-Del	Amp_20q11.21	0.0394	1
8p-Del	Del_11q23.3	0.0394	1
Amp_11q22.1	Del_11q23.3	0.0394	1
Amp_8q24.21	Amp_9p24.1	0.0395	1
13q-Del	Del_7q34	0.0396	1
4q-Del	Amp_5p15.33	0.0396	1
5p-Amp	Amp_8q24.21	0.0397	1
Amp_8q24.21	Del_8p23.3	0.0397	1
20q-Amp	Amp_5p15.33	0.0398	1
ERBB3	ZNF578	0.04	1
HLA-B	ZNF578	0.04	1
HLA-B	SMAD4	0.04	1
TP53	20q-Amp	0.04	1
TP53	Del_4q35.2	0.04	1
ZNF578	FAT2	0.04	1
FAT2	SMAD4	0.04	1
22q-Del	Del_4q35.2	0.04	1
C3orf70	Amp_17q25.1	0.0403	1
1p-Amp	Amp_17q25.1	0.0403	1
5q-Del	Del_20p12.1	0.0403	1
1p-Amp	Amp_19q13.13	0.0408	1
Amp_5p15.33	Del_7q34	0.0408	1
Del_3p14.2	Del_7q34	0.0408	1
Del_13q14.2	Del_17p12	0.0413	1
FBXW7	RB1	0.0414	1
NFE2L2	8p-Del	0.0414	1
PTPRC	18q-Del	0.0414	1
Amp_17q12	Del_5q35.2	0.0414	1
C12orf43	Xp-Del	0.0416	1
Amp_1q21.3	Amp_3q28	0.0417	1
Amp_11q13.3	Del_11q25	0.042	1
1q-Amp	Amp_13q22.1	0.0424	1
Del_10q23.31	Del_11q25	0.0429	1
Xp-Del	Amp_8q24.21	0.043	1
Del_2q37.1	Del_8p23.3	0.0432	1
Amp_3q28	Amp_15q26.1	0.0436	1
11q-Del	Del_8p23.3	0.0437	1
ARID1A	TCTE1	0.0441	1
ERBB3	HLA-A	0.0443	1
HLA-A	MED1	0.0443	1
FAT2	Del_22q13.32	0.0443	1
Del_14q32.31	Del_18q21.2	0.0443	1
Amp_3q26.31	Amp_11q13.3	0.0445	1
20p-Amp	Amp_17q25.1	0.0446	1
Amp_17q25.1	Del_5q12.1	0.0446	1
Del_5q12.1	Del_17q25.3	0.0446	1
ERBB2	SEMA4B	0.0451	1
C12orf43	Amp_13q22.1	0.0451	1
SEMA4B	ZNF750	0.0451	1
USP28	Amp_13q22.1	0.0451	1
3q-Amp	Amp_17q25.1	0.0453	1
Amp_1q44	Amp_3q28	0.0455	1
11p-Del	Del_4q35.2	0.0456	1
11p-Del	Del_13q12.11	0.0456	1
FAT2	Del_3p14.2	0.0457	1
3p-Del	Del_11q23.3	0.0457	1
4p-Del	Del_13q12.11	0.0465	1
Del_1p36.23	Del_14q32.31	0.0467	1
Amp_6p21.33	Del_6p24.2	0.0472	1
Del_2q22.1	Del_6p24.2	0.0472	1
ANKRD12	NHS	0.0473	1
Del_4q21.3	Del_11q23.3	0.0474	1
Del_11q23.3	Del_16q11.2	0.0474	1
10q-Del	Del_5q35.2	0.0475	1
5p-Amp	4p-Del	0.0476	1
11q-Del	4p-Del	0.0476	1
10q-Del	Del_17p12	0.0477	1
Amp_1q44	Amp_13q22.1	0.0477	1
CASP8	TRIM9	0.0478	1
PTPRC	TRIM9	0.0478	1
RB1	TRIM9	0.0478	1
TP53	TRIM9	0.0478	1
ZNF578	Amp_5p15.33	0.0478	1
IDS	Del_3p14.2	0.0478	1
TRIM9	22q-Del	0.0478	1
Amp_11p12	Del_3p14.2	0.0478	1
Amp_3q28	Amp_11q13.3	0.0479	1
8p-Del	Del_5q12.1	0.0481	1
Amp_3q26.31	Del_8p23.3	0.0482	1
1p-Amp	Amp_16p13.13	0.0491	1
Amp_13q22.1	Del_20p12.1	0.0491	1
MED1	Amp_1q44	0.0492	1
Amp_8q24.21	Del_11p15.1	0.0493	1
10q-Del	Del_13q12.11	0.0494	1
18q-Del	Del_6q26	0.0494	1
3q-Amp	5p-Amp	0.0495	1
BAP1	Del_6p24.2	0.05	1
C12orf43	4q-Del	0.05	1
C12orf43	Del_4q22.1	0.05	1
USP28	Del_6p24.2	0.05	1
8q-Amp	Del_8p23.1	0.0501	1
8q-Amp	Del_13q14.2	0.0501	1
5q-Del	Del_13q14.2	0.0501	1
HLA-A	TCTE1	0.0503	1
MUC4	Amp_5p15.33	0.0504	1
17p-Del	Amp_11p12	0.0505	1
8p-Del	Del_11q25	0.0506	1
Del_7q34	Del_17p12	0.051	1
PIK3CA	IDS	0.0512	1
Del_8p23.1	Del_11q25	0.0514	1
Del_14q32.31	Del_16q23.1	0.0522	1
NFE2L2	Del_8p23.3	0.0523	1
Amp_7p11.2	Del_11q23.3	0.0524	1
5q-Del	Del_10q23.31	0.0526	1
Amp_9p24.1	Amp_19q13.13	0.0526	1
Amp_17q25.1	Amp_19q13.13	0.0526	1
Amp_17q25.1	Del_10q23.31	0.0526	1
HLA-B	Del_15q21.1	0.0528	1
FAT2	Del_15q21.1	0.0528	1
11p-Del	3q-Del	0.0529	1
5p-Amp	Del_5q12.1	0.054	1
FAT2	SEMA4B	0.0542	1
Amp_5p15.33	Del_11p15.1	0.0545	1
Amp_2q33.1	Amp_8q24.21	0.0546	1
Del_1p36.23	Del_10q23.31	0.0549	1
PTPRC	Del_18q21.2	0.055	1
TP53	Amp_2p24.3	0.055	1
17p-Del	Del_6p24.2	0.055	1
Amp_1p31.3	Amp_5p15.33	0.055	1
Amp_5p15.33	Amp_17q25.1	0.055	1
C3orf70	EP300	0.0551	1
IDS	3p-Del	0.0552	1
IDS	Del_6q26	0.0552	1
3p-Del	Amp_11p12	0.0552	1
Amp_15q26.1	Del_4q35.2	0.0554	1
11q-Del	Del_20p12.1	0.0557	1
Del_8p23.3	Del_20p12.1	0.0557	1
Del_8p23.3	Del_18q21.2	0.0558	1
HLA-A	NHS	0.0562	1
NFE2L2	Amp_6p21.33	0.0562	1
Amp_1q44	Amp_21q22.13	0.0562	1
Amp_17q12	Amp_Xq28	0.0562	1
FBXW7	Del_5q12.1	0.0564	1
10q-Del	Del_5q12.1	0.0564	1
Amp_13q22.1	Del_5q12.1	0.0564	1
Del_2q22.1	Del_11p15.1	0.0567	1
Del_4q22.1	Del_11q23.3	0.057	1
10q-Del	4p-Del	0.0572	1
13q-Del	4p-Del	0.0572	1
Amp_21q22.13	Del_5q35.2	0.0573	1
Amp_11q22.1	Del_2q37.1	0.0578	1
Amp_5p15.33	Del_3p14.2	0.0581	1
TRIM9	ZNF750	0.0585	1
STK11	Del_17p12	0.0587	1
11q-Del	Del_8p23.1	0.0587	1
Del_8p23.3	Del_13q14.2	0.0587	1
Del_17p12	Del_22q13.32	0.0587	1
Del_7q34	Del_13q14.2	0.0592	1
Amp_3q28	Del_4q35.2	0.0593	1
CASP8	RB1	0.0599	1
MAPK1	22q-Del	0.0599	1
SEMA4B	11p-Del	0.06	1
11p-Del	Del_1p13.2	0.06	1
ERBB3	Amp_20q11.21	0.0602	1
10q-Del	5q-Del	0.0603	1
18q-Del	5q-Del	0.0603	1
18q-Del	6q-Del	0.0603	1
5q-Del	Amp_13q22.1	0.0603	1
6q-Del	Amp_13q22.1	0.0603	1
Amp_1p31.3	Amp_16p13.13	0.0603	1
Amp_16p13.13	Amp_17q25.1	0.0603	1
MUC4	PTPRC	0.0605	1
USP28	Del_16q11.2	0.0605	1
3q-Del	Del_11p15.1	0.0607	1
Del_3p14.2	Del_11q25	0.0617	1
HLA-B	Amp_17q25.1	0.062	1
5q-Del	Amp_11q13.3	0.062	1
6q-Del	Amp_2q33.1	0.062	1
Xp-Del	Amp_11p12	0.062	1
Amp_2q33.1	Amp_9p24.1	0.062	1
C3orf70	Amp_5p15.33	0.0622	1
BAP1	Del_3p14.2	0.0622	1
USP28	Amp_5p15.33	0.0622	1
1q-Amp	Amp_8q24.21	0.0622	1
17p-Del	Amp_8q24.21	0.0622	1
4p-Del	Del_11q23.3	0.0624	1
20q-Amp	Amp_1q21.3	0.0625	1
MUC4	Del_4q21.3	0.0626	1
TP53	Del_16q11.2	0.0626	1
ARID1A	IDS	0.0633	1
EP300	PIK3CA	0.0636	1
TCTE1	Del_17q25.3	0.0637	1
20q-Amp	Del_4q22.1	0.0637	1
NHS	SEMA4B	0.0638	1
Amp_21q22.13	Del_5q12.1	0.0641	1
11q-Del	Del_3p14.2	0.0647	1
11p-Del	Del_8p23.1	0.0651	1
Amp_2p24.3	Del_2q37.1	0.0651	1
20q-Amp	Amp_1q44	0.0656	1
10q-Del	Del_13q14.2	0.0656	1
Amp_13q22.1	Del_13q14.2	0.0656	1
Amp_6p21.33	Amp_8q24.21	0.0658	1
Amp_1q44	Del_11q25	0.0659	1
Amp_Xq28	Del_16q23.1	0.066	1
Del_2q22.1	Del_16q23.1	0.066	1
20p-Amp	Amp_1q21.3	0.0661	1
13q-Del	Del_10q23.31	0.0662	1
5p-Amp	Del_19q13.33	0.0664	1
11q-Del	Del_19q13.33	0.0664	1
Del_8p23.3	Del_19q13.33	0.0664	1
Del_5q12.1	Del_6q26	0.0676	1
Amp_3q26.31	Amp_16p13.13	0.068	1
8q-Amp	Del_11q23.3	0.0683	1
Del_11q23.3	Del_17q25.3	0.0683	1
PIK3CA	TP53	0.0687	1
1p-Amp	Amp_2p24.3	0.0697	1
Amp_2p24.3	Del_15q21.1	0.0697	1
HLA-B	MTOR	0.0699	1
TRIM9	Amp_2q33.1	0.0699	1
20p-Amp	4q-Del	0.0699	1
4q-Del	Del_11q25	0.0702	1
Del_5q12.1	Del_10q23.31	0.0704	1
17p-Del	Del_10q23.31	0.0705	1
8p-Del	Amp_7p11.2	0.0706	1
Amp_15q26.1	Del_8p23.1	0.0708	1
Amp_19q13.13	Amp_21q22.13	0.0714	1
USP28	8p-Del	0.0718	1
FBXW7	KRAS	0.0719	1
KRAS	Amp_16p13.13	0.0719	1
13q-Del	Amp_11q13.3	0.0719	1
18q-Del	Amp_2q33.1	0.0719	1
18q-Del	Amp_11q13.3	0.0719	1
ANKRD12	PTEN	0.072	1
ANKRD12	Del_2q22.1	0.072	1
ZNF578	Amp_13q34	0.072	1
11q-Del	Del_4q21.3	0.072	1
Amp_11p12	Amp_13q34	0.072	1
SEMA4B	Del_Xq21.33	0.0721	1
NFE2L2	Del_3p14.2	0.0722	1
Amp_8q24.21	Del_4q22.1	0.0724	1
Del_2q37.1	Del_17q25.3	0.0726	1
10q-Del	13q-Del	0.0728	1
1q-Amp	Amp_3q26.31	0.0729	1
ERBB2	Del_19q13.33	0.0731	1
RB1	ZNF750	0.0731	1
3p-Del	Del_2q37.1	0.0731	1
Xp-Del	Amp_5p15.33	0.0731	1
EP300	ZNF750	0.0733	1
3p-Del	Amp_13q34	0.0735	1
3p-Del	Del_2q22.1	0.0735	1
Del_2q22.1	Del_13q12.11	0.0735	1
Del_4q35.2	Del_22q13.32	0.0735	1
11p-Del	Amp_5p15.33	0.0739	1
Amp_1q44	Amp_8q24.21	0.0739	1
5p-Amp	Amp_1p31.3	0.0741	1
Amp_3q28	Amp_16p13.13	0.0743	1
Del_5q35.2	Del_13q14.2	0.0743	1
ANKRD12	MUC4	0.0762	1
MUC4	ZNF578	0.0762	1
MUC4	IDS	0.0762	1
Amp_13q34	Del_3p14.2	0.0763	1
Amp_8q24.21	Del_4q35.2	0.0772	1
Amp_8q24.21	Del_13q12.11	0.0772	1
Del_8p23.3	Del_17p12	0.0775	1
Amp_5p15.33	Del_4q21.3	0.0776	1
C3orf70	20p-Amp	0.0777	1
13q-Del	Amp_5p15.33	0.0778	1
3q-Del	Del_8p23.1	0.0778	1
NHS	Amp_9p24.1	0.078	1
1q-Amp	5p-Amp	0.0782	1
17p-Del	Del_8p23.3	0.0782	1
STK11	4q-Del	0.0783	1
NFE2L2	PIK3CA	0.0786	1
PIK3CA	NHS	0.0786	1
LIN9	3q-Amp	0.0789	1
PTPRC	Amp_11q22.1	0.0792	1
MED1	Amp_1q21.3	0.0794	1
Del_15q21.1	Del_17p12	0.0796	1
EP300	Del_13q12.11	0.0803	1
20q-Amp	Amp_2p24.3	0.0803	1
Del_6q26	Del_18q21.2	0.0803	1
ARID1A	20p-Amp	0.0809	1
SMAD4	Del_15q21.1	0.0811	1
Amp_1q44	Amp_3q26.31	0.0811	1
Amp_11p12	Del_20p12.1	0.0811	1
Del_3p14.2	Del_11q23.3	0.0812	1
Amp_19q13.13	Del_4q22.1	0.0816	1
11p-Del	8p-Del	0.0817	1
Amp_20q11.21	Del_4q22.1	0.0817	1
Amp_20q11.21	Del_6p24.2	0.0817	1
1q-Amp	Amp_3q28	0.0819	1
Amp_6p21.33	Del_11q23.3	0.0819	1
Del_2q22.1	Del_11q23.3	0.0819	1
ZNF578	5p-Amp	0.082	1
MTOR	Del_1p36.23	0.0821	1
NFE2L2	TRIM9	0.0821	1
NHS	TRIM9	0.0821	1
FAT2	20q-Amp	0.0822	1
Amp_11q13.3	Del_13q12.11	0.0822	1
17p-Del	Del_6q26	0.0825	1
Amp_9p24.1	Del_11q25	0.0825	1
Del_11q25	Del_17q25.3	0.0825	1
Amp_2q33.1	Del_4q22.1	0.0826	1
Del_11q23.3	Del_13q14.2	0.083	1
Amp_1q44	Amp_2p24.3	0.0831	1
Del_2q37.1	Del_17p12	0.0832	1
C3orf70	Amp_19q13.13	0.0838	1
20p-Amp	Del_17p12	0.0839	1
ARID1A	PTEN	0.0843	1
Amp_6p21.33	Amp_7p11.2	0.0843	1
Amp_7p11.2	Amp_13q34	0.0843	1
Amp_13q34	Amp_15q26.1	0.0843	1
EP300	8q-Amp	0.0849	1
EP300	Amp_17q25.1	0.0849	1
19p-Del	Amp_15q26.1	0.0849	1
19p-Del	Del_14q32.31	0.0849	1
5q-Del	Del_18q21.2	0.0849	1
6q-Del	Amp_2p24.3	0.0849	1
6q-Del	Del_18q21.2	0.0849	1
20p-Amp	Amp_2p24.3	0.0851	1
Amp_1q21.3	Amp_8q24.21	0.0851	1
Del_7q34	Del_11q25	0.0855	1
MUC4	5p-Amp	0.0859	1
20q-Amp	19p-Del	0.086	1
20q-Amp	Del_Xp11.3	0.086	1
Del_1p13.2	Del_13q12.11	0.086	1
17p-Del	Del_4q21.3	0.0864	1
13q-Del	Del_6p24.2	0.0866	1
Amp_13q22.1	Del_4q22.1	0.0866	1
Amp_16p13.13	Del_6p24.2	0.0866	1
NHS	Amp_20q11.21	0.0868	1
Amp_17q12	Amp_20q11.21	0.0868	1
CASP8	HLA-B	0.0871	1
HLA-B	RB1	0.0871	1
HLA-B	TP53	0.0871	1
PTPRC	FAT2	0.0871	1
PTPRC	Amp_11q13.3	0.0871	1
TP53	FAT2	0.0871	1
ERBB2	MUC4	0.0877	1
RB1	20p-Amp	0.0883	1
TP53	20p-Amp	0.0883	1
Amp_11q22.1	Del_2q22.1	0.0884	1
ARID1A	MUC4	0.0885	1
10q-Del	11p-Del	0.0886	1
Amp_8q24.21	Del_15q21.1	0.0888	1
Amp_5p15.33	Del_Xp11.3	0.089	1
NFE2L2	Amp_16p13.13	0.0902	1
18q-Del	Amp_17q12	0.0902	1
18q-Del	Del_1p36.23	0.0902	1
Del_8p23.3	Del_11q23.3	0.0903	1
ZNF578	Del_17q25.3	0.0906	1
8q-Amp	Amp_11p12	0.0906	1
5q-Del	Amp_11p12	0.0906	1
11q-Del	Del_7q34	0.0907	1
MED1	4p-Del	0.0909	1
Amp_5p15.33	Del_4q35.2	0.091	1
Del_5q12.1	Del_8p23.1	0.0916	1
Del_5q12.1	Del_13q14.2	0.0916	1
3q-Del	Del_8p23.3	0.0917	1
EP300	4p-Del	0.092	1
Amp_7p11.2	Del_10q23.31	0.092	1
RAB35	3q-Amp	0.0925	1
Amp_13q34	Del_8p23.1	0.0929	1
TP53	Amp_8q24.21	0.0935	1
EP300	HLA-B	0.094	1
KRAS	Del_18q21.2	0.094	1
Amp_2p24.3	Amp_2q33.1	0.094	1
Amp_2q33.1	Del_18q21.2	0.094	1
Amp_11q13.3	Del_18q21.2	0.094	1
20q-Amp	5p-Amp	0.0946	1
Amp_5p15.33	Amp_20q11.21	0.0949	1
5p-Amp	Amp_13q22.1	0.0956	1
10q-Del	11q-Del	0.0956	1
11q-Del	13q-Del	0.0956	1
ERBB2	5p-Amp	0.0958	1
Del_11p15.1	Del_13q14.2	0.0958	1
Amp_3q26.31	Amp_5p15.33	0.0959	1
3q-Amp	Del_6p24.2	0.096	1
HLA-A	SEMA4B	0.0962	1
HLA-A	Del_1p13.2	0.0962	1
19p-Del	Amp_6p21.33	0.0962	1
Amp_13q34	Del_Xp11.3	0.0962	1
Del_1p13.2	Del_22q13.32	0.0962	1
4p-Del	Amp_19q13.13	0.0963	1
11q-Del	Del_2q37.1	0.0964	1
RAB35	11p-Del	0.0966	1
USP28	11p-Del	0.0966	1
Amp_6p21.33	Del_11q25	0.097	1
18q-Del	Del_2q37.1	0.0973	1
Amp_19q13.13	Del_19q13.33	0.0978	1
Del_10q23.31	Del_19q13.33	0.0978	1
5p-Amp	Amp_15q26.1	0.0982	1
LIN9	Del_11q23.3	0.0984	1
1p-Amp	Amp_20q11.21	0.0986	1
EP300	Amp_19q13.13	0.0989	1
Amp_9p24.1	Del_16q11.2	0.0989	1
Del_10q23.31	Del_18q21.2	0.0989	1
1p-Amp	Amp_15q26.1	0.0992	1
20q-Amp	Del_4q21.3	0.0992	1
20q-Amp	Del_16q11.2	0.0992	1
5p-Amp	Amp_3q26.31	0.0992	1
Amp_15q26.1	Del_15q21.1	0.0992	1
Del_4q35.2	Del_11q23.3	0.0992	1
Del_13q12.11	Del_16q23.1	0.0992	1
18q-Del	Del_11q23.3	0.0995	1
Del_3p14.2	Del_10q23.31	0.0995	1
6q-Del	Amp_3q26.31	0.0996	1
Amp_1p31.3	Amp_3q26.31	0.0996	1
Amp_3q26.31	Amp_9p24.1	0.0996	1
FBXW7	SMAD4	0.1	1
HLA-A	PTEN	0.1	1
FAT2	Del_8p23.1	0.1	1
SMAD4	18q-Del	0.1	1
18q-Del	Amp_11p12	0.1	1
ERBB2	Amp_5p15.33	0.101	1
C12orf43	TCTE1	0.101	1
LIN9	Del_17p12	0.101	1
SEMA4B	Del_13q14.2	0.101	1
19p-Del	Del_8p23.1	0.101	1
Amp_2p24.3	Del_11q25	0.101	1
Amp_11p12	Del_17p12	0.101	1
Del_11q25	Del_18q21.2	0.101	1
Del_13q14.2	Del_Xp11.3	0.101	1
EP300	13q-Del	0.102	1
EP300	Amp_13q22.1	0.102	1
NFE2L2	RB1	0.102	1
PTPRC	NHS	0.102	1
TP53	NHS	0.102	1
Amp_1q21.3	Amp_20q11.21	0.102	1
Amp_2p24.3	Amp_13q22.1	0.102	1
NFE2L2	Del_6p24.2	0.103	1
11p-Del	Del_8p23.3	0.103	1
4q-Del	Del_1p36.23	0.103	1
Amp_17q12	Del_6p24.2	0.103	1
6q-Del	Del_17p12	0.104	1
Amp_1q44	Amp_19q13.13	0.104	1
Amp_21q22.13	Del_11p15.1	0.104	1
Del_17p12	Del_17q25.3	0.104	1
EP300	Del_13q14.2	0.105	1
ZNF750	Amp_2q33.1	0.105	1
8q-Amp	17p-Del	0.105	1
Amp_1q44	Del_16q23.1	0.105	1
Amp_2p24.3	Amp_20q11.21	0.105	1
Del_16q23.1	Del_17p12	0.105	1
KRAS	Del_16q23.1	0.106	1
FAT2	Del_16q11.2	0.106	1
ZNF578	Amp_8q24.21	0.107	1
3q-Amp	Amp_15q26.1	0.107	1
3q-Del	Del_1p13.2	0.107	1
Amp_8q24.21	Amp_11p12	0.107	1
Del_3p14.2	Del_20p12.1	0.107	1
Del_11q25	Del_13q14.2	0.107	1
PIK3CA	ZNF750	0.108	1
SEMA4B	Del_15q21.1	0.108	1
SEMA4B	Del_20p12.1	0.108	1
5p-Amp	Amp_20q11.21	0.108	1
8p-Del	Del_20p12.1	0.108	1
Amp_1p31.3	Amp_3q28	0.108	1
Amp_3q28	Amp_9p24.1	0.108	1
Amp_15q26.1	Amp_21q22.13	0.108	1
Amp_20q11.21	Del_8p23.3	0.108	1
Amp_21q22.13	Del_14q32.31	0.108	1
NFE2L2	3p-Del	0.109	1
LIN9	Del_11q25	0.109	1
NHS	20q-Amp	0.109	1
Del_1p36.23	Del_4q35.2	0.109	1
RAB35	Del_11p15.1	0.11	1
USP28	Del_11p15.1	0.11	1
IDS	Del_4q22.1	0.111	1
TCTE1	Del_5q35.2	0.111	1
4q-Del	Amp_11p12	0.111	1
Amp_11p12	Del_4q22.1	0.111	1
Del_11q23.3	Del_Xq21.33	0.111	1
TP53	3q-Amp	0.112	1
5p-Amp	Amp_3q28	0.112	1
5p-Amp	Del_5q35.2	0.112	1
3q-Del	Amp_8q24.21	0.112	1
Xp-Del	Amp_2q33.1	0.112	1
1q-Amp	Amp_21q22.13	0.113	1
8q-Amp	Del_7q34	0.114	1
Amp_8q24.21	Del_13q14.2	0.114	1
MUC4	PTEN	0.115	1
MUC4	Del_2q22.1	0.115	1
18q-Del	Del_11p15.1	0.115	1
Amp_1p31.3	Amp_15q26.1	0.115	1
Amp_13q22.1	Del_11p15.1	0.115	1
CASP8	Amp_3q26.31	0.116	1
RB1	Amp_3q26.31	0.116	1
11p-Del	Del_10q23.31	0.116	1
Amp_1p31.3	Amp_8q24.21	0.116	1
Amp_3q26.31	Del_19q13.33	0.116	1
EP300	NFE2L2	0.117	1
MUC4	SEMA4B	0.117	1
PIK3CA	Del_15q21.1	0.117	1
C12orf43	1q-Amp	0.117	1
RAB35	1q-Amp	0.117	1
USP28	17p-Del	0.117	1
Amp_2p24.3	Amp_17q12	0.117	1
Amp_3q26.31	Del_6p24.2	0.117	1
Amp_17q12	Del_18q21.2	0.117	1
Del_1p36.23	Del_18q21.2	0.117	1
1p-Amp	Amp_6p21.33	0.118	1
1p-Amp	Amp_Xq28	0.118	1
8q-Amp	Del_4q35.2	0.118	1
8q-Amp	Del_6q26	0.118	1
11p-Del	Del_19q13.33	0.118	1
6q-Del	Del_13q12.11	0.118	1
Amp_6p21.33	Del_15q21.1	0.118	1
Del_8p23.3	Del_11q25	0.118	1
Del_11q25	Del_Xq21.33	0.118	1
Del_15q21.1	Del_22q13.32	0.118	1
10q-Del	Del_11q25	0.119	1
ERBB3	MUC4	0.12	1
MUC4	Amp_2q33.1	0.12	1
SEMA4B	Del_17q25.3	0.12	1
TCTE1	20p-Amp	0.12	1
3q-Amp	Amp_9p24.1	0.12	1
11q-Del	4q-Del	0.12	1
11q-Del	Del_4q22.1	0.12	1
4p-Del	Del_1p36.23	0.12	1
4q-Del	Amp_2p24.3	0.12	1
Amp_2p24.3	Del_4q22.1	0.12	1
Del_11q23.3	Del_20p12.1	0.12	1
ANKRD12	USP28	0.121	1
C3orf70	ZNF578	0.121	1
C3orf70	Amp_11p12	0.121	1
EP300	ZNF578	0.121	1
EP300	LIN9	0.121	1
ZNF578	USP28	0.121	1
C12orf43	Amp_11p12	0.121	1
IDS	USP28	0.121	1
LIN9	USP28	0.121	1
SMAD4	USP28	0.121	1
SMAD4	Amp_2p24.3	0.121	1
SMAD4	Del_18q21.2	0.121	1
Amp_2p24.3	Amp_11p12	0.121	1
Amp_3q26.31	Amp_7p11.2	0.121	1
Amp_3q26.31	Amp_15q26.1	0.121	1
Amp_3q26.31	Del_8p23.1	0.121	1
Amp_11p12	Del_18q21.2	0.121	1
CASP8	Amp_3q28	0.122	1
HLA-A	MTOR	0.122	1
MAPK1	Amp_3q28	0.122	1
NFE2L2	Del_Xq21.33	0.122	1
RB1	Amp_3q28	0.122	1
TP53	Amp_3q28	0.122	1
TRIM9	Del_22q13.32	0.122	1
Amp_3q28	Del_19q13.33	0.122	1
Amp_13q34	Amp_21q22.13	0.122	1
Amp_17q12	Del_2q37.1	0.122	1
Amp_21q22.13	Amp_Xq28	0.122	1
ERBB2	Del_1p36.23	0.123	1
ERBB2	Del_17p12	0.123	1
20q-Amp	Amp_21q22.13	0.123	1
Del_5q12.1	Del_20p12.1	0.123	1
BAP1	Del_13q12.11	0.124	1
C12orf43	Del_4q35.2	0.124	1
Amp_1q44	Amp_5p15.33	0.124	1
ERBB3	HLA-B	0.125	1
ERBB3	FAT2	0.125	1
ERBB3	MED1	0.125	1
ERBB3	Amp_2q33.1	0.125	1
FAT2	Amp_2q33.1	0.125	1
Amp_2q33.1	Amp_11q13.3	0.125	1
17p-Del	8p-Del	0.126	1
17p-Del	Amp_11q22.1	0.126	1
4q-Del	Del_2q37.1	0.126	1
Amp_3q28	Del_6p24.2	0.127	1
Amp_13q34	Del_8p23.3	0.127	1
Del_8p23.3	Del_22q13.32	0.127	1
ERBB2	Amp_19q13.13	0.128	1
17p-Del	Del_2q37.1	0.128	1
Del_8p23.1	Del_16q11.2	0.128	1
Del_13q14.2	Del_16q11.2	0.128	1
10q-Del	17p-Del	0.129	1
13q-Del	17p-Del	0.129	1
EP300	11p-Del	0.13	1
FAT2	Del_8p23.3	0.13	1
3q-Amp	Amp_2p24.3	0.13	1
5q-Del	Amp_11q22.1	0.13	1
8p-Del	Del_17q25.3	0.13	1
NHS	Del_16q11.2	0.131	1
Amp_1q44	Amp_15q26.1	0.131	1
ARID1A	FBXW7	0.132	1
ARID1A	18q-Del	0.132	1
ERBB2	Amp_8q24.21	0.132	1
MED1	Amp_11q22.1	0.132	1
MED1	Del_5q35.2	0.132	1
NHS	Del_8p23.1	0.132	1
13q-Del	Amp_15q26.1	0.132	1
4p-Del	Amp_21q22.13	0.132	1
4p-Del	Del_17q25.3	0.132	1
Amp_2q33.1	Amp_11q22.1	0.132	1
Amp_20q11.21	Del_4q21.3	0.132	1
Amp_20q11.21	Del_16q11.2	0.132	1
FBXW7	Del_1p13.2	0.133	1
13q-Del	Amp_1q44	0.133	1
13q-Del	Del_1p13.2	0.133	1
13q-Del	Del_17p12	0.133	1
18q-Del	19p-Del	0.133	1
18q-Del	Del_1p13.2	0.133	1
8p-Del	Del_3p14.2	0.133	1
Amp_13q22.1	Del_Xp11.3	0.133	1
ARID1A	PTPRC	0.134	1
ARID1A	RB1	0.134	1
ARID1A	TP53	0.134	1
PTPRC	Amp_15q26.1	0.134	1
TP53	Del_14q32.31	0.134	1
22q-Del	Amp_15q26.1	0.134	1
22q-Del	Del_14q32.31	0.134	1
Amp_19q13.13	Amp_20q11.21	0.134	1
Del_14q32.31	Del_19q13.33	0.134	1
HLA-A	Amp_1p31.3	0.136	1
HLA-A	Amp_9p24.1	0.136	1
HLA-A	Del_17q25.3	0.136	1
8q-Amp	Amp_Xq28	0.136	1
Amp_1q21.3	Amp_11p12	0.136	1
Amp_6p21.33	Amp_9p24.1	0.136	1
Amp_13q34	Amp_17q25.1	0.136	1
Del_5q12.1	Del_8p23.3	0.136	1
TRIM9	Del_15q21.1	0.137	1
Amp_21q22.13	Del_15q21.1	0.137	1
Del_15q21.1	Del_20p12.1	0.137	1
MUC4	Del_17p12	0.138	1
4q-Del	Del_11q23.3	0.138	1
Del_4q22.1	Del_16q11.2	0.138	1
Del_6p24.2	Del_11q23.3	0.138	1
Del_6p24.2	Del_16q23.1	0.138	1
Del_11q25	Del_16q23.1	0.138	1
USP28	Del_8p23.1	0.139	1
Del_6p24.2	Del_11p15.1	0.139	1
C12orf43	Del_Xp11.3	0.14	1
Del_11q25	Del_20p12.1	0.14	1
1q-Amp	Del_11p15.1	0.141	1
20p-Amp	8p-Del	0.141	1
CASP8	Del_11q23.3	0.142	1
Amp_7p11.2	Del_Xq21.33	0.142	1
Amp_21q22.13	Del_13q14.2	0.142	1
Del_11q23.3	Del_19q13.33	0.142	1
HLA-A	11p-Del	0.143	1
8q-Amp	Amp_5p15.33	0.143	1
11p-Del	Del_2q22.1	0.143	1
5q-Del	Amp_5p15.33	0.143	1
Amp_5p15.33	Del_17q25.3	0.143	1
Amp_8q24.21	Amp_15q26.1	0.143	1
Amp_11p12	Del_7q34	0.143	1
ZNF578	Del_2q37.1	0.144	1
20q-Amp	Del_5q35.2	0.144	1
Amp_7p11.2	Del_11p15.1	0.144	1
Amp_11p12	Del_2q37.1	0.144	1
ERBB3	Amp_17q12	0.145	1
ERBB3	Del_1p36.23	0.145	1
HLA-B	NHS	0.145	1
KRAS	NHS	0.145	1
20q-Amp	Amp_16p13.13	0.145	1
10q-Del	Del_6q26	0.145	1
13q-Del	3p-Del	0.145	1
13q-Del	Del_4q35.2	0.145	1
13q-Del	Del_6q26	0.145	1
Amp_3q28	Del_4q21.3	0.145	1
Amp_13q22.1	Del_4q35.2	0.145	1
Amp_13q22.1	Del_6q26	0.145	1
FAT2	20p-Amp	0.146	1
SEMA4B	Del_4q22.1	0.146	1
20p-Amp	Amp_2q33.1	0.146	1
20q-Amp	Del_17p12	0.146	1
19p-Del	Del_6p24.2	0.146	1
Amp_5p15.33	Amp_15q26.1	0.146	1
Amp_8q24.21	Amp_13q22.1	0.146	1
Amp_8q24.21	Del_7q34	0.146	1
Amp_11q13.3	Del_5q12.1	0.146	1
STK11	11p-Del	0.147	1
20p-Amp	Amp_1p31.3	0.147	1
6q-Del	Del_5q12.1	0.147	1
Amp_9p24.1	Del_13q14.2	0.147	1
Del_13q14.2	Del_17q25.3	0.147	1
EP300	5p-Amp	0.148	1
5p-Amp	Amp_2p24.3	0.148	1
ANKRD12	TCTE1	0.149	1
STK11	ZNF578	0.149	1
ZNF578	TCTE1	0.149	1
SMAD4	TCTE1	0.149	1
1q-Amp	20p-Amp	0.149	1
CASP8	Amp_6p21.33	0.15	1
HLA-A	PTPRC	0.15	1
MAPK1	Del_22q13.32	0.15	1
PTEN	TP53	0.15	1
RB1	Amp_13q34	0.15	1
TP53	Amp_13q34	0.15	1
4q-Del	Amp_7p11.2	0.15	1
Amp_6p21.33	Del_19q13.33	0.15	1
Amp_7p11.2	Del_4q22.1	0.15	1
Amp_7p11.2	Del_6p24.2	0.15	1
Amp_13q34	Del_19q13.33	0.15	1
Amp_15q26.1	Del_4q22.1	0.15	1
Amp_Xq28	Del_19q13.33	0.15	1
Del_19q13.33	Del_22q13.32	0.15	1
Xp-Del	Amp_13q34	0.151	1
Xp-Del	Amp_Xq28	0.151	1
MUC4	17p-Del	0.152	1
RB1	1q-Amp	0.152	1
RB1	17p-Del	0.152	1
TRIM9	Del_17q25.3	0.152	1
8q-Amp	Amp_21q22.13	0.152	1
Amp_8q24.21	Del_17p12	0.152	1
Amp_9p24.1	Amp_21q22.13	0.152	1
Amp_17q25.1	Amp_21q22.13	0.152	1
Del_1p13.2	Del_17p12	0.152	1
Del_17p12	Del_Xp11.3	0.152	1
ERBB2	11p-Del	0.153	1
ZNF750	11p-Del	0.153	1
Del_7q34	Del_11q23.3	0.153	1
C3orf70	MUC4	0.154	1
FBXW7	Del_5q35.2	0.154	1
MUC4	RAB35	0.154	1
MUC4	USP28	0.154	1
IDS	8p-Del	0.154	1
SMAD4	8p-Del	0.154	1
18q-Del	Amp_11q22.1	0.154	1
18q-Del	Del_5q35.2	0.154	1
Amp_11p12	Del_5q35.2	0.154	1
Amp_11q22.1	Amp_13q22.1	0.154	1
ARID1A	Amp_20q11.21	0.155	1
FBXW7	HLA-A	0.155	1
FBXW7	Amp_Xq28	0.155	1
10q-Del	Del_22q13.32	0.155	1
13q-Del	Del_2q22.1	0.155	1
18q-Del	Del_22q13.32	0.155	1
Amp_6p21.33	Amp_16p13.13	0.155	1
4p-Del	Del_13q14.2	0.156	1
KRAS	PIK3CA	0.157	1
C3orf70	MTOR	0.158	1
MTOR	BAP1	0.158	1
C12orf43	TRIM9	0.158	1
TRIM9	USP28	0.158	1
6q-Del	Del_20p12.1	0.158	1
Del_15q21.1	Del_17q25.3	0.158	1
CASP8	Del_11q25	0.159	1
MUC4	Amp_8q24.21	0.159	1
1q-Amp	Amp_20q11.21	0.159	1
5p-Amp	Del_15q21.1	0.159	1
19p-Del	Amp_2p24.3	0.159	1
19p-Del	Del_18q21.2	0.159	1
8p-Del	Del_17p12	0.159	1
Del_1p13.2	Del_18q21.2	0.159	1
Del_2q37.1	Del_18q21.2	0.159	1
Del_8p23.3	Del_15q21.1	0.159	1
Del_11q25	Del_19q13.33	0.159	1
ARID1A	ZNF750	0.16	1
ERBB3	Amp_19q13.13	0.16	1
HLA-B	Amp_19q13.13	0.16	1
MED1	Amp_19q13.13	0.16	1
Amp_2p24.3	Del_4q21.3	0.16	1
Amp_2p24.3	Del_16q11.2	0.16	1
Amp_2q33.1	Amp_19q13.13	0.16	1
FBXW7	4p-Del	0.161	1
5p-Amp	Amp_1q44	0.161	1
19p-Del	Amp_8q24.21	0.161	1
4p-Del	Amp_13q22.1	0.161	1
8p-Del	Amp_19q13.13	0.161	1
Xp-Del	Del_20p12.1	0.161	1
Amp_16p13.13	Amp_20q11.21	0.161	1
Del_15q21.1	Del_Xq21.33	0.161	1
C3orf70	5p-Amp	0.162	1
C3orf70	11q-Del	0.162	1
NFE2L2	Del_5q35.2	0.162	1
NHS	8p-Del	0.162	1
USP28	5p-Amp	0.162	1
USP28	Del_8p23.3	0.162	1
11q-Del	Del_10q23.31	0.162	1
Amp_19q13.13	Del_8p23.3	0.162	1
Del_6p24.2	Del_11q25	0.162	1
PTPRC	20q-Amp	0.164	1
RB1	20q-Amp	0.164	1
3q-Del	Amp_2q33.1	0.164	1
Amp_1q44	Del_6p24.2	0.164	1
Del_4q35.2	Del_19q13.33	0.164	1
KRAS	Del_17p12	0.165	1
Amp_2q33.1	Del_17p12	0.165	1
Amp_7p11.2	Del_11q25	0.165	1
Del_10q23.31	Del_17q25.3	0.165	1
Del_11p15.1	Del_18q21.2	0.165	1
Amp_8q24.21	Del_6q26	0.166	1
Amp_11p12	Del_5q12.1	0.166	1
FBXW7	TRIM9	0.167	1
HLA-A	Amp_1q44	0.167	1
MTOR	10q-Del	0.167	1
TRIM9	18q-Del	0.167	1
20p-Amp	Amp_5p15.33	0.167	1
10q-Del	Amp_21q22.13	0.167	1
13q-Del	Amp_21q22.13	0.167	1
Amp_1q44	Amp_Xq28	0.167	1
Amp_13q22.1	Amp_21q22.13	0.167	1
Amp_16p13.13	Amp_21q22.13	0.167	1
ARID1A	Del_18q21.2	0.168	1
CASP8	Del_15q21.1	0.168	1
EP300	Del_14q32.31	0.168	1
MAPK1	1p-Amp	0.168	1
NFE2L2	NHS	0.168	1
PTPRC	Del_15q21.1	0.168	1
RB1	1p-Amp	0.168	1
TP53	1p-Amp	0.168	1
TP53	Del_20p12.1	0.168	1
22q-Del	Del_15q21.1	0.168	1
Amp_1q21.3	Amp_17q25.1	0.168	1
Amp_17q12	Del_1p36.23	0.168	1
Del_15q21.1	Del_19q13.33	0.168	1
NHS	11q-Del	0.169	1
NHS	Del_8p23.3	0.169	1
5p-Amp	Amp_17q12	0.169	1
Del_1p36.23	Del_8p23.3	0.169	1
5q-Del	Del_Xq21.33	0.171	1
Amp_17q25.1	Del_Xq21.33	0.171	1
Amp_20q11.21	Del_Xp11.3	0.171	1
STK11	Del_1p13.2	0.172	1
SEMA4B	Del_4q21.3	0.172	1
SEMA4B	Del_11q23.3	0.172	1
SEMA4B	Del_16q11.2	0.172	1
Del_4q21.3	Del_Xp11.3	0.172	1
20p-Amp	Amp_16p13.13	0.173	1
11p-Del	Del_20p12.1	0.173	1
11q-Del	17p-Del	0.173	1
18q-Del	Del_5q12.1	0.173	1
ARID1A	20q-Amp	0.174	1
ARID1A	Del_6q26	0.174	1
TRIM9	Del_8p23.3	0.174	1
20q-Amp	4q-Del	0.174	1
Amp_17q12	Del_11q23.3	0.174	1
Amp_21q22.13	Del_8p23.3	0.174	1
Del_4q22.1	Del_6q26	0.174	1
Del_6p24.2	Del_13q12.11	0.174	1
PTEN	Del_11p15.1	0.175	1
ZNF750	Amp_1q21.3	0.175	1
4p-Del	Amp_3q28	0.175	1
Amp_13q34	Del_11p15.1	0.175	1
STK11	17p-Del	0.176	1
ZNF578	IDS	0.176	1
ZNF578	LIN9	0.176	1
ZNF578	SMAD4	0.176	1
ZNF578	Amp_11p12	0.176	1
IDS	LIN9	0.176	1
LIN9	SMAD4	0.176	1
22q-Del	4p-Del	0.176	1
4p-Del	Del_19q13.33	0.176	1
ANKRD12	Del_10q23.31	0.177	1
C3orf70	CASP8	0.177	1
C3orf70	RB1	0.177	1
C3orf70	Del_19q13.33	0.177	1
CASP8	C12orf43	0.177	1
CASP8	USP28	0.177	1
KRAS	Amp_8q24.21	0.177	1
PTPRC	USP28	0.177	1
RB1	C12orf43	0.177	1
RB1	RAB35	0.177	1
RB1	USP28	0.177	1
FAT2	Amp_8q24.21	0.177	1
IDS	Amp_19q13.13	0.177	1
LIN9	Amp_19q13.13	0.177	1
MED1	Amp_8q24.21	0.177	1
USP28	22q-Del	0.177	1
8p-Del	Amp_8q24.21	0.177	1
Amp_1q44	Del_11q23.3	0.177	1
MUC4	8q-Amp	0.178	1
MUC4	6q-Del	0.178	1
MUC4	Amp_9p24.1	0.178	1
11q-Del	Del_16q11.2	0.178	1
Amp_3q26.31	Del_2q37.1	0.178	1
Del_8p23.3	Del_16q11.2	0.178	1
NFE2L2	Del_5q12.1	0.179	1
PTEN	ZNF750	0.179	1
8p-Del	Del_4q22.1	0.179	1
Amp_17q12	Del_5q12.1	0.179	1
ERBB2	Del_11p15.1	0.18	1
ZNF750	Del_11p15.1	0.18	1
1p-Amp	Amp_13q22.1	0.18	1
10q-Del	Del_Xq21.33	0.18	1
13q-Del	Del_15q21.1	0.18	1
18q-Del	Xp-Del	0.18	1
18q-Del	Del_15q21.1	0.18	1
Xp-Del	Amp_13q22.1	0.18	1
Amp_16p13.13	Del_Xq21.33	0.18	1
PTEN	Amp_8q24.21	0.181	1
8q-Amp	Amp_9p24.1	0.181	1
5q-Del	6q-Del	0.181	1
5q-Del	Amp_17q25.1	0.181	1
Amp_1p31.3	Amp_17q25.1	0.181	1
Amp_5p15.33	Del_13q12.11	0.181	1
Amp_9p24.1	Amp_17q25.1	0.181	1
8q-Amp	Del_2q37.1	0.183	1
4q-Del	Amp_21q22.13	0.183	1
Amp_2p24.3	Del_11q23.3	0.183	1
Amp_21q22.13	Del_4q22.1	0.183	1
CASP8	Amp_1p31.3	0.185	1
EP300	1q-Amp	0.185	1
MAPK1	Amp_1p31.3	0.185	1
RB1	Amp_1p31.3	0.185	1
RB1	Amp_9p24.1	0.185	1
RB1	Amp_17q25.1	0.185	1
TP53	Amp_1p31.3	0.185	1
1q-Amp	Amp_2p24.3	0.185	1
Amp_19q13.13	Del_5q12.1	0.185	1
C12orf43	Amp_1q44	0.186	1
RAB35	Amp_1q44	0.186	1
TCTE1	20q-Amp	0.186	1
TCTE1	3p-Del	0.186	1
USP28	Del_17p12	0.186	1
ZNF750	Del_2q37.1	0.186	1
Del_7q34	Del_Xp11.3	0.186	1
ARID1A	Amp_2q33.1	0.187	1
ERBB3	Del_14q32.31	0.187	1
KRAS	Del_14q32.31	0.187	1
FAT2	Amp_15q26.1	0.187	1
MED1	Del_14q32.31	0.187	1
1q-Amp	20q-Amp	0.187	1
Amp_2q33.1	Del_14q32.31	0.187	1
Amp_3q28	Amp_5p15.33	0.187	1
Amp_11q13.3	Amp_15q26.1	0.187	1
Amp_11q13.3	Del_14q32.31	0.187	1
ARID1A	Del_16q11.2	0.188	1
ARID1A	Del_16q23.1	0.188	1
5p-Amp	Del_2q37.1	0.188	1
Amp_7p11.2	Del_4q21.3	0.188	1
Amp_15q26.1	Del_4q21.3	0.188	1
PTPRC	Del_8p23.1	0.189	1
FAT2	Amp_20q11.21	0.189	1
SEMA4B	Del_11q25	0.189	1
4p-Del	Del_14q32.31	0.189	1
Del_8p23.1	Del_19q13.33	0.189	1
3q-Amp	11q-Del	0.19	1
4q-Del	Xp-Del	0.19	1
Xp-Del	Del_4q22.1	0.19	1
Del_6p24.2	Del_Xq21.33	0.19	1
MUC4	Del_7q34	0.191	1
11p-Del	Amp_2q33.1	0.191	1
5q-Del	Del_11q25	0.191	1
1q-Amp	Amp_6p21.33	0.192	1
17p-Del	Del_22q13.32	0.192	1
HLA-A	Del_3p14.2	0.193	1
Amp_5p15.33	Amp_13q34	0.193	1
Amp_20q11.21	Del_11q25	0.193	1
Del_3p14.2	Del_22q13.32	0.193	1
C3orf70	Amp_8q24.21	0.194	1
FBXW7	Amp_19q13.13	0.194	1
ZNF750	1q-Amp	0.194	1
11p-Del	Amp_3q28	0.194	1
18q-Del	Del_10q23.31	0.194	1
Amp_13q22.1	Amp_19q13.13	0.194	1
Del_11p15.1	Del_16q11.2	0.194	1
Del_11p15.1	Del_16q23.1	0.194	1
C3orf70	ERBB2	0.195	1
C12orf43	ZNF750	0.195	1
RAB35	ZNF750	0.195	1
USP28	ZNF750	0.195	1
5p-Amp	Del_17q25.3	0.195	1
8q-Amp	11q-Del	0.195	1
8q-Amp	Del_8p23.3	0.195	1
11q-Del	Del_17q25.3	0.195	1
EP300	PTEN	0.196	1
EP300	Amp_Xq28	0.196	1
STK11	4p-Del	0.196	1
3p-Del	Del_10q23.31	0.196	1
Amp_1q21.3	Amp_15q26.1	0.196	1
Amp_2p24.3	Amp_6p21.33	0.196	1
Amp_2p24.3	Del_2q22.1	0.196	1
Amp_19q13.13	Del_1p36.23	0.196	1
Del_2q37.1	Del_16q23.1	0.196	1
Del_6q26	Del_10q23.31	0.196	1
Del_18q21.2	Del_22q13.32	0.196	1
4q-Del	Amp_20q11.21	0.197	1
ERBB2	1p-Amp	0.199	1
ERBB2	Del_15q21.1	0.199	1
TRIM9	Amp_2p24.3	0.199	1
TRIM9	Del_18q21.2	0.199	1
ZNF750	1p-Amp	0.199	1
Xp-Del	Del_18q21.2	0.199	1
Amp_2p24.3	Del_Xq21.33	0.199	1
PIK3CA	Amp_20q11.21	0.2	1
5p-Amp	Del_4q35.2	0.2	1
11q-Del	3p-Del	0.2	1
11q-Del	Del_4q35.2	0.2	1
11q-Del	Del_13q12.11	0.2	1
19p-Del	Amp_11q22.1	0.2	1
19p-Del	Del_5q35.2	0.2	1
8p-Del	Del_1p13.2	0.2	1
Amp_3q26.31	Del_2q22.1	0.2	1
Amp_11q22.1	Del_1p13.2	0.2	1
Amp_11q22.1	Del_Xp11.3	0.2	1
Del_8p23.3	Del_13q12.11	0.2	1
Amp_1q21.3	Del_Xp11.3	0.201	1
Del_5q12.1	Del_6p24.2	0.201	1
MUC4	Del_3p14.2	0.202	1
ZNF578	11p-Del	0.202	1
C12orf43	Amp_20q11.21	0.202	1
IDS	11p-Del	0.202	1
11p-Del	Amp_11p12	0.202	1
Del_4q22.1	Del_15q21.1	0.202	1
Del_4q22.1	Del_20p12.1	0.202	1
Del_6p24.2	Del_20p12.1	0.202	1
ANKRD12	SEMA4B	0.203	1
CASP8	13q-Del	0.203	1
MUC4	4p-Del	0.203	1
RB1	10q-Del	0.203	1
RB1	Amp_16p13.13	0.203	1
TP53	Amp_13q22.1	0.203	1
TP53	Amp_16p13.13	0.203	1
IDS	SEMA4B	0.203	1
IDS	Del_1p13.2	0.203	1
LIN9	SEMA4B	0.203	1
10q-Del	22q-Del	0.203	1
18q-Del	22q-Del	0.203	1
Amp_5p15.33	Amp_11p12	0.203	1
11p-Del	Amp_17q25.1	0.204	1
Amp_3q26.31	Del_6q26	0.204	1
CASP8	Amp_5p15.33	0.205	1
FBXW7	5q-Del	0.205	1
8q-Amp	Amp_13q22.1	0.205	1
10q-Del	Amp_9p24.1	0.205	1
10q-Del	Amp_17q25.1	0.205	1
10q-Del	Del_17q25.3	0.205	1
13q-Del	Amp_9p24.1	0.205	1
13q-Del	Del_17q25.3	0.205	1
18q-Del	Amp_17q25.1	0.205	1
3q-Del	Amp_15q26.1	0.205	1
Amp_2p24.3	Del_6q26	0.205	1
Amp_5p15.33	Del_19q13.33	0.205	1
Amp_1q44	Del_15q21.1	0.206	1
Amp_2p24.3	Amp_11q22.1	0.206	1
Amp_2p24.3	Del_5q35.2	0.206	1
Amp_7p11.2	Del_13q14.2	0.206	1
Amp_11q22.1	Del_18q21.2	0.206	1
Del_5q35.2	Del_18q21.2	0.206	1
Del_13q14.2	Del_14q32.31	0.206	1
PIK3CA	Amp_Xq28	0.207	1
Amp_3q28	Del_11p15.1	0.208	1
Amp_15q26.1	Del_7q34	0.208	1
HLA-B	Amp_13q34	0.209	1
KRAS	PTEN	0.209	1
MED1	Amp_13q34	0.209	1
Amp_6p21.33	Amp_11q13.3	0.209	1
Amp_21q22.13	Del_17p12	0.209	1
PTEN	Del_4q35.2	0.21	1
20q-Amp	Amp_Xq28	0.21	1
3p-Del	Del_22q13.32	0.21	1
Amp_6p21.33	Del_4q35.2	0.21	1
Amp_6p21.33	Del_13q12.11	0.21	1
Amp_7p11.2	Del_2q37.1	0.21	1
Amp_15q26.1	Del_2q37.1	0.21	1
Del_2q22.1	Del_6q26	0.21	1
NFE2L2	Amp_1q44	0.211	1
SEMA4B	Del_2q37.1	0.211	1
5p-Amp	Del_7q34	0.211	1
19p-Del	Del_2q37.1	0.211	1
Amp_1q44	Del_11p15.1	0.211	1
Del_4q22.1	Del_8p23.1	0.211	1
PIK3CA	ZNF578	0.212	1
Amp_3q28	Amp_13q34	0.212	1
C3orf70	ERBB3	0.213	1
HLA-B	C12orf43	0.213	1
HLA-B	USP28	0.213	1
C12orf43	FAT2	0.213	1
C12orf43	MED1	0.213	1
C12orf43	Amp_2q33.1	0.213	1
MED1	USP28	0.213	1
USP28	Amp_11q13.3	0.213	1
20q-Amp	Del_4q35.2	0.213	1
FBXW7	MUC4	0.214	1
MUC4	13q-Del	0.214	1
MUC4	TP53	0.215	1
TRIM9	Del_16q23.1	0.215	1
1q-Amp	Del_16q23.1	0.215	1
20p-Amp	19p-Del	0.215	1
20p-Amp	Del_Xp11.3	0.215	1
Amp_21q22.13	Del_4q21.3	0.215	1
ARID1A	NFE2L2	0.216	1
ARID1A	NHS	0.216	1
ARID1A	Del_1p36.23	0.216	1
CASP8	TCTE1	0.216	1
NFE2L2	Amp_15q26.1	0.216	1
PIK3CA	PTPRC	0.216	1
PIK3CA	RB1	0.216	1
PTPRC	TCTE1	0.216	1
STK11	22q-Del	0.216	1
TP53	TCTE1	0.216	1
NHS	Amp_15q26.1	0.216	1
13q-Del	Del_11q23.3	0.218	1
Xp-Del	Del_7q34	0.218	1
Del_2q22.1	Del_16q11.2	0.218	1
HLA-A	3q-Del	0.219	1
3q-Del	Amp_13q34	0.219	1
ERBB2	Del_17q25.3	0.22	1
ZNF750	Amp_1p31.3	0.22	1
ZNF750	Amp_9p24.1	0.22	1
MTOR	Amp_8q24.21	0.221	1
RB1	Del_6p24.2	0.221	1
TP53	Del_4q22.1	0.221	1
TRIM9	Amp_8q24.21	0.221	1
3q-Amp	Amp_19q13.13	0.221	1
22q-Del	4q-Del	0.221	1
4q-Del	Del_19q13.33	0.221	1
Amp_8q24.21	Amp_21q22.13	0.221	1
Del_4q22.1	Del_19q13.33	0.221	1
5p-Amp	11p-Del	0.222	1
1p-Amp	Amp_8q24.21	0.223	1
3p-Del	Amp_3q28	0.223	1
4q-Del	Amp_19q13.13	0.223	1
Amp_3q28	Del_6q26	0.223	1
MUC4	8p-Del	0.224	1
13q-Del	Del_2q37.1	0.225	1
EP300	Del_15q21.1	0.226	1
ZNF578	Del_11p15.1	0.226	1
IDS	Del_11p15.1	0.226	1
NHS	Amp_8q24.21	0.226	1
Del_15q21.1	Del_18q21.2	0.226	1
MUC4	TCTE1	0.227	1
8p-Del	Del_Xq21.33	0.227	1
Amp_11q22.1	Del_Xq21.33	0.227	1
Del_5q35.2	Del_Xq21.33	0.227	1
CASP8	5p-Amp	0.228	1
MUC4	Amp_3q26.31	0.228	1
C12orf43	Amp_1q21.3	0.228	1
RAB35	Amp_1q21.3	0.228	1
20q-Amp	Del_11q25	0.228	1
5p-Amp	22q-Del	0.228	1
11q-Del	22q-Del	0.228	1
MTOR	ZNF578	0.229	1
MTOR	IDS	0.229	1
MTOR	Amp_11p12	0.229	1
ZNF578	TRIM9	0.229	1
17p-Del	Del_15q21.1	0.229	1
19p-Del	Amp_19q13.13	0.229	1
Amp_11p12	Amp_21q22.13	0.229	1
Amp_19q13.13	Del_1p13.2	0.229	1
C3orf70	NHS	0.23	1
C3orf70	Amp_17q12	0.23	1
EP300	Del_5q12.1	0.23	1
NFE2L2	USP28	0.23	1
USP28	Amp_17q12	0.23	1
8q-Amp	4q-Del	0.23	1
8q-Amp	Del_4q22.1	0.23	1
5q-Del	Del_6p24.2	0.23	1
6q-Del	Del_4q22.1	0.23	1
Amp_2p24.3	Del_5q12.1	0.23	1
Amp_9p24.1	Del_6p24.2	0.23	1
Amp_17q25.1	Del_6p24.2	0.23	1
Del_5q12.1	Del_18q21.2	0.23	1
MUC4	Del_8p23.1	0.231	1
11p-Del	Amp_17q12	0.231	1
Amp_5p15.33	Del_6p24.2	0.231	1
Amp_21q22.13	Del_7q34	0.231	1
FBXW7	Amp_13q22.1	0.232	1
FBXW7	Amp_16p13.13	0.232	1
HLA-B	Del_20p12.1	0.232	1
KRAS	Del_20p12.1	0.232	1
10q-Del	18q-Del	0.232	1
Amp_11q13.3	Del_20p12.1	0.232	1
Amp_13q22.1	Amp_16p13.13	0.232	1
Del_5q35.2	Del_11q25	0.232	1
SEMA4B	Del_1p13.2	0.233	1
SEMA4B	Del_Xp11.3	0.233	1
5p-Amp	13q-Del	0.233	1
10q-Del	Del_8p23.3	0.233	1
19p-Del	Del_1p13.2	0.233	1
8p-Del	Del_4q21.3	0.233	1
Amp_20q11.21	Amp_21q22.13	0.233	1
Del_11q23.3	Del_16q23.1	0.234	1
C12orf43	Del_2q37.1	0.236	1
USP28	Del_2q37.1	0.236	1
8q-Amp	Amp_3q28	0.236	1
6q-Del	Amp_3q28	0.236	1
Amp_3q28	Amp_17q25.1	0.236	1
Del_5q12.1	Del_Xq21.33	0.236	1
Del_16q11.2	Del_17p12	0.236	1
HLA-B	3q-Amp	0.237	1
11p-Del	18q-Del	0.237	1
Del_3p14.2	Del_8p23.3	0.237	1
STK11	ZNF750	0.238	1
STK11	11q-Del	0.238	1
TCTE1	ZNF750	0.238	1
TCTE1	5p-Amp	0.238	1
Del_4q21.3	Del_6q26	0.238	1
ERBB2	Del_8p23.1	0.239	1
ZNF578	1q-Amp	0.239	1
FAT2	17p-Del	0.239	1
LIN9	1q-Amp	0.239	1
LIN9	17p-Del	0.239	1
MED1	1q-Amp	0.239	1
1q-Amp	Amp_2q33.1	0.239	1
17p-Del	Amp_2q33.1	0.239	1
CASP8	EP300	0.24	1
EP300	Del_19q13.33	0.24	1
ERBB2	10q-Del	0.24	1
ERBB2	Amp_16p13.13	0.24	1
NFE2L2	Amp_13q34	0.24	1
NFE2L2	Del_22q13.32	0.24	1
ZNF750	10q-Del	0.24	1
20q-Amp	4p-Del	0.24	1
22q-Del	Del_18q21.2	0.24	1
Amp_6p21.33	Amp_17q12	0.24	1
Amp_6p21.33	Del_1p36.23	0.24	1
Amp_17q12	Del_2q22.1	0.24	1
Amp_Xq28	Del_1p36.23	0.24	1
Del_1p36.23	Del_2q22.1	0.24	1
Del_18q21.2	Del_19q13.33	0.24	1
Amp_13q34	Del_7q34	0.241	1
Amp_1q21.3	Amp_Xq28	0.244	1
Amp_19q13.13	Del_8p23.1	0.244	1
8q-Amp	Del_11p15.1	0.245	1
3q-Del	5q-Del	0.245	1
3q-Del	Amp_17q25.1	0.245	1
Del_10q23.31	Del_Xq21.33	0.245	1
5p-Amp	8p-Del	0.246	1
11q-Del	8p-Del	0.246	1
11q-Del	Del_5q35.2	0.246	1
NFE2L2	Amp_3q26.31	0.247	1
NHS	Amp_3q26.31	0.247	1
Amp_6p21.33	Del_8p23.1	0.247	1
Amp_6p21.33	Del_13q14.2	0.247	1
Del_2q22.1	Del_13q14.2	0.247	1
Del_8p23.1	Del_22q13.32	0.247	1
TRIM9	8p-Del	0.248	1
Amp_11q22.1	Amp_21q22.13	0.248	1
MUC4	Amp_3q28	0.249	1
1p-Amp	20q-Amp	0.249	1
8q-Amp	Amp_1q44	0.249	1
8q-Amp	Del_17p12	0.249	1
13q-Del	Del_11q25	0.249	1
18q-Del	Del_11q25	0.249	1
Amp_1q44	Amp_9p24.1	0.249	1
Del_4q35.2	Del_15q21.1	0.249	1
Del_6q26	Del_20p12.1	0.249	1
Del_13q12.11	Del_15q21.1	0.249	1
Del_4q21.3	Del_20p12.1	0.25	1
Del_15q21.1	Del_16q11.2	0.25	1
Del_15q21.1	Del_16q23.1	0.25	1
ANKRD12	20q-Amp	0.252	1
LIN9	20q-Amp	0.252	1
LIN9	Del_4q35.2	0.252	1
SMAD4	Del_4q35.2	0.252	1
Amp_11p12	Del_4q35.2	0.252	1
Amp_11p12	Del_13q12.11	0.252	1
Amp_20q11.21	Del_11q23.3	0.253	1
ANKRD12	CASP8	0.254	1
ANKRD12	RB1	0.254	1
MAPK1	LIN9	0.254	1
MAPK1	SMAD4	0.254	1
PTPRC	SMAD4	0.254	1
RB1	SMAD4	0.254	1
TP53	ZNF578	0.254	1
TP53	IDS	0.254	1
TP53	LIN9	0.254	1
TP53	SMAD4	0.254	1
SMAD4	22q-Del	0.254	1
Amp_11p12	Del_19q13.33	0.254	1
ERBB3	Amp_9p24.1	0.255	1
KRAS	8q-Amp	0.255	1
FAT2	Amp_9p24.1	0.255	1
MED1	Amp_9p24.1	0.255	1
8q-Amp	Amp_2q33.1	0.255	1
Amp_1p31.3	Amp_2q33.1	0.255	1
Amp_1p31.3	Amp_11q13.3	0.255	1
Amp_2p24.3	Amp_19q13.13	0.255	1
EP300	Amp_9p24.1	0.256	1
HLA-B	20q-Amp	0.256	1
FAT2	3p-Del	0.256	1
MED1	Del_13q12.11	0.256	1
20q-Amp	Amp_2q33.1	0.256	1
5q-Del	Amp_2p24.3	0.256	1
Amp_1p31.3	Amp_2p24.3	0.256	1
Amp_2q33.1	Del_6q26	0.256	1
Amp_17q25.1	Del_18q21.2	0.256	1
Amp_8q24.21	Del_16q23.1	0.257	1
FBXW7	3q-Del	0.258	1
MUC4	Del_5q12.1	0.258	1
5p-Amp	Del_14q32.31	0.258	1
11p-Del	Amp_1q21.3	0.258	1
Amp_3q26.31	Del_3p14.2	0.258	1
ERBB3	TCTE1	0.259	1
FBXW7	4q-Del	0.259	1
KRAS	STK11	0.259	1
NFE2L2	Amp_3q28	0.259	1
PTPRC	Del_16q11.2	0.259	1
PTPRC	Del_16q23.1	0.259	1
TP53	Del_16q23.1	0.259	1
MED1	TCTE1	0.259	1
NHS	Amp_3q28	0.259	1
TCTE1	Amp_11q13.3	0.259	1
10q-Del	Del_6p24.2	0.259	1
18q-Del	4q-Del	0.259	1
18q-Del	Del_4q22.1	0.259	1
22q-Del	Del_16q11.2	0.259	1
22q-Del	Del_16q23.1	0.259	1
4q-Del	Amp_13q22.1	0.259	1
Del_4q21.3	Del_19q13.33	0.259	1
20p-Amp	Del_16q11.2	0.26	1
20p-Amp	Del_16q23.1	0.26	1
Amp_3q26.31	Del_4q21.3	0.26	1
Del_11q23.3	Del_15q21.1	0.26	1
ERBB2	Del_4q22.1	0.261	1
Amp_6p21.33	Del_2q37.1	0.261	1
Amp_13q34	Del_2q37.1	0.261	1
TRIM9	Del_1p13.2	0.262	1
19p-Del	Amp_21q22.13	0.262	1
Amp_21q22.13	Del_Xp11.3	0.262	1
8p-Del	Del_22q13.32	0.263	1
Amp_8q24.21	Del_11q25	0.263	1
Amp_11q22.1	Amp_Xq28	0.263	1
ARID1A	C12orf43	0.264	1
ARID1A	RAB35	0.264	1
ARID1A	USP28	0.264	1
C3orf70	Del_14q32.31	0.264	1
ZNF578	4p-Del	0.264	1
BAP1	Amp_7p11.2	0.264	1
SMAD4	4p-Del	0.264	1
USP28	Amp_15q26.1	0.264	1
USP28	Del_14q32.31	0.264	1
NHS	Del_15q21.1	0.265	1
NHS	Del_20p12.1	0.265	1
20p-Amp	Amp_21q22.13	0.265	1
3q-Amp	8p-Del	0.266	1
20q-Amp	Del_8p23.1	0.268	1
Amp_8q24.21	Del_17q25.3	0.268	1
Del_6q26	Del_8p23.1	0.268	1
MUC4	3q-Amp	0.269	1
3q-Amp	4p-Del	0.269	1
CASP8	Amp_1q44	0.27	1
RB1	Amp_1q44	0.27	1
RB1	Del_17p12	0.27	1
STK11	Amp_1q44	0.27	1
TP53	Amp_1q44	0.27	1
22q-Del	Del_17p12	0.27	1
1q-Amp	Amp_5p15.33	0.271	1
11p-Del	Del_6p24.2	0.271	1
3q-Del	4q-Del	0.271	1
3q-Del	Del_4q22.1	0.271	1
4p-Del	Amp_3q26.31	0.271	1
Amp_7p11.2	Amp_19q13.13	0.271	1
Amp_19q13.13	Del_14q32.31	0.271	1
3p-Del	Del_7q34	0.272	1
ARID1A	Amp_15q26.1	0.273	1
ARID1A	Del_14q32.31	0.273	1
4p-Del	Amp_11q13.3	0.273	1
Amp_15q26.1	Del_14q32.31	0.273	1
ZNF750	Amp_5p15.33	0.274	1
5p-Amp	Del_4q22.1	0.274	1
Del_4q22.1	Del_8p23.3	0.274	1
Del_7q34	Del_15q21.1	0.274	1
ERBB3	FBXW7	0.277	1
ERBB3	18q-Del	0.277	1
FBXW7	HLA-B	0.277	1
FBXW7	MED1	0.277	1
HLA-B	10q-Del	0.277	1
HLA-B	Amp_13q22.1	0.277	1
HLA-B	Amp_16p13.13	0.277	1
KRAS	18q-Del	0.277	1
FAT2	13q-Del	0.277	1
IDS	Del_8p23.1	0.277	1
MED1	13q-Del	0.277	1
MED1	Amp_13q22.1	0.277	1
SMAD4	Del_8p23.1	0.277	1
22q-Del	Del_7q34	0.277	1
Del_7q34	Del_19q13.33	0.277	1
ANKRD12	ERBB2	0.279	1
ANKRD12	ZNF750	0.279	1
ERBB2	LIN9	0.279	1
SMAD4	ZNF750	0.279	1
STK11	NHS	0.28	1
IDS	3q-Amp	0.28	1
C3orf70	PTEN	0.281	1
C3orf70	Amp_6p21.33	0.281	1
C3orf70	Amp_Xq28	0.281	1
EP300	Amp_5p15.33	0.281	1
HLA-A	RAB35	0.281	1
HLA-A	USP28	0.281	1
PTEN	BAP1	0.281	1
PTEN	RAB35	0.281	1
PTEN	USP28	0.281	1
BAP1	Del_2q22.1	0.281	1
RAB35	Del_2q22.1	0.281	1
USP28	Amp_6p21.33	0.281	1
USP28	Del_22q13.32	0.281	1
Amp_2p24.3	Amp_5p15.33	0.281	1
Amp_21q22.13	Del_10q23.31	0.281	1
Amp_21q22.13	Del_11q25	0.281	1
Del_11p15.1	Del_Xq21.33	0.281	1
ERBB2	Del_18q21.2	0.282	1
8q-Amp	Del_16q23.1	0.282	1
13q-Del	Del_11p15.1	0.282	1
6q-Del	Del_4q21.3	0.282	1
Amp_9p24.1	Del_4q21.3	0.282	1
PIK3CA	8p-Del	0.283	1
11p-Del	4p-Del	0.283	1
11q-Del	Del_5q12.1	0.283	1
3q-Del	Amp_2p24.3	0.284	1
Amp_21q22.13	Del_2q37.1	0.284	1
Del_8p23.1	Del_16q23.1	0.284	1
ERBB2	Del_8p23.3	0.285	1
PTPRC	Amp_8q24.21	0.285	1
NFE2L2	17p-Del	0.286	1
NHS	17p-Del	0.286	1
1q-Amp	Del_1p36.23	0.286	1
Del_5q12.1	Del_11q25	0.286	1
EP300	FBXW7	0.287	1
EP300	10q-Del	0.287	1
EP300	Amp_16p13.13	0.287	1
PTEN	20p-Amp	0.287	1
20p-Amp	Del_22q13.32	0.287	1
10q-Del	Del_18q21.2	0.287	1
18q-Del	Amp_2p24.3	0.287	1
Amp_1p31.3	Amp_20q11.21	0.287	1
Amp_3q28	Amp_7p11.2	0.287	1
Amp_16p13.13	Del_18q21.2	0.287	1
Amp_19q13.13	Del_16q11.2	0.287	1
Del_2q22.1	Del_5q12.1	0.287	1
Del_10q23.31	Del_16q23.1	0.287	1
NFE2L2	Amp_1q21.3	0.288	1
SEMA4B	Del_11p15.1	0.288	1
5p-Amp	Del_11p15.1	0.288	1
Amp_1q21.3	Amp_17q12	0.288	1
Amp_1q21.3	Del_1p36.23	0.288	1
Del_1p13.2	Del_11p15.1	0.288	1
SEMA4B	Amp_5p15.33	0.289	1
SEMA4B	Del_3p14.2	0.289	1
20q-Amp	8q-Amp	0.289	1
20q-Amp	Amp_1p31.3	0.289	1
19p-Del	Amp_5p15.33	0.289	1
19p-Del	Del_3p14.2	0.289	1
3p-Del	Amp_9p24.1	0.289	1
3p-Del	Amp_17q25.1	0.289	1
3p-Del	Del_17q25.3	0.289	1
Amp_9p24.1	Del_4q35.2	0.289	1
Del_1p13.2	Del_3p14.2	0.289	1
Del_3p14.2	Del_Xp11.3	0.289	1
NFE2L2	5q-Del	0.29	1
NFE2L2	Amp_9p24.1	0.29	1
NFE2L2	Del_17q25.3	0.29	1
FAT2	Del_13q14.2	0.29	1
NHS	Del_17q25.3	0.29	1
17p-Del	Xp-Del	0.29	1
5q-Del	Amp_17q12	0.29	1
5q-Del	Del_1p36.23	0.29	1
6q-Del	Del_1p36.23	0.29	1
Amp_9p24.1	Amp_17q12	0.29	1
Amp_17q12	Del_17q25.3	0.29	1
Del_8p23.1	Del_15q21.1	0.29	1
Del_13q14.2	Del_15q21.1	0.29	1
CASP8	SEMA4B	0.291	1
MAPK1	Del_1p13.2	0.291	1
PTPRC	19p-Del	0.291	1
RB1	SEMA4B	0.291	1
TP53	SEMA4B	0.291	1
SEMA4B	22q-Del	0.291	1
Del_19q13.33	Del_Xp11.3	0.291	1
TCTE1	Amp_20q11.21	0.292	1
11q-Del	Amp_1q21.3	0.292	1
11q-Del	Amp_1q44	0.292	1
Amp_3q26.31	Amp_19q13.13	0.292	1
Amp_3q26.31	Del_10q23.31	0.292	1
Amp_11q22.1	Del_5q35.2	0.292	1
FBXW7	Amp_1q44	0.294	1
MUC4	Amp_19q13.13	0.294	1
MTOR	TRIM9	0.295	1
CASP8	Amp_11q22.1	0.296	1
PTPRC	8p-Del	0.296	1
TP53	8p-Del	0.296	1
3q-Del	Del_4q21.3	0.296	1
C3orf70	Del_15q21.1	0.297	1
C12orf43	1p-Amp	0.297	1
C12orf43	Del_20p12.1	0.297	1
RAB35	1p-Amp	0.297	1
USP28	Del_20p12.1	0.297	1
Amp_1q21.3	Del_5q12.1	0.298	1
PTPRC	Amp_20q11.21	0.299	1
RB1	Amp_20q11.21	0.299	1
C12orf43	Del_3p14.2	0.299	1
RAB35	Del_3p14.2	0.299	1
USP28	Del_3p14.2	0.299	1
20q-Amp	Xp-Del	0.299	1
3p-Del	Del_Xq21.33	0.299	1
8p-Del	Del_15q21.1	0.299	1
Xp-Del	Del_4q35.2	0.299	1
Xp-Del	Del_13q12.11	0.299	1
Del_5q35.2	Del_15q21.1	0.299	1
Del_5q35.2	Del_20p12.1	0.299	1
ERBB3	Del_4q22.1	0.3	1
FAT2	Del_4q22.1	0.3	1
4q-Del	Amp_2q33.1	0.3	1
Del_3p14.2	Del_17q25.3	0.3	1
ERBB2	Del_16q11.2	0.302	1
HLA-A	Amp_15q26.1	0.302	1
Amp_6p21.33	Del_14q32.31	0.302	1
Amp_15q26.1	Del_22q13.32	0.302	1
Amp_Xq28	Del_14q32.31	0.302	1
ANKRD12	ERBB3	0.303	1
ANKRD12	HLA-B	0.303	1
ANKRD12	FAT2	0.303	1
ANKRD12	MED1	0.303	1
ERBB3	IDS	0.303	1
ERBB3	SMAD4	0.303	1
HLA-B	IDS	0.303	1
HLA-B	LIN9	0.303	1
HLA-B	Amp_11p12	0.303	1
KRAS	LIN9	0.303	1
ZNF578	MED1	0.303	1
FAT2	IDS	0.303	1
FAT2	LIN9	0.303	1
IDS	Amp_2q33.1	0.303	1
LIN9	MED1	0.303	1
LIN9	Amp_11q13.3	0.303	1
SMAD4	Amp_11q13.3	0.303	1
17p-Del	19p-Del	0.303	1
17p-Del	Del_Xp11.3	0.303	1
Amp_2q33.1	Amp_11p12	0.303	1
NFE2L2	20q-Amp	0.305	1
PTEN	11q-Del	0.305	1
5p-Amp	Amp_13q34	0.305	1
5p-Amp	Amp_Xq28	0.305	1
5p-Amp	Del_22q13.32	0.305	1
11q-Del	Del_2q22.1	0.305	1
Amp_6p21.33	Del_8p23.3	0.305	1
Amp_17q12	Del_6q26	0.305	1
Amp_17q12	Del_13q12.11	0.305	1
Del_1p36.23	Del_6q26	0.305	1
11p-Del	Amp_2p24.3	0.306	1
11p-Del	Del_18q21.2	0.306	1
17p-Del	18q-Del	0.306	1
17p-Del	Amp_13q22.1	0.306	1
11p-Del	Amp_3q26.31	0.307	1
PIK3CA	RAB35	0.308	1
PIK3CA	USP28	0.308	1
4p-Del	Del_Xq21.33	0.308	1
Del_5q35.2	Del_6q26	0.308	1
MAPK1	Amp_3q26.31	0.309	1
TP53	Amp_3q26.31	0.309	1
Amp_3q28	Del_2q37.1	0.309	1
HLA-A	Del_10q23.31	0.31	1
NFE2L2	3q-Amp	0.31	1
3q-Amp	Amp_17q12	0.31	1
Amp_13q34	Amp_19q13.13	0.31	1
Amp_19q13.13	Amp_Xq28	0.31	1
Del_11q23.3	Del_14q32.31	0.31	1
11p-Del	Del_13q14.2	0.311	1
Amp_3q28	Amp_19q13.13	0.312	1
Amp_3q28	Del_10q23.31	0.312	1
ARID1A	Amp_1q44	0.313	1
C3orf70	8q-Amp	0.313	1
C3orf70	Amp_1p31.3	0.313	1
C12orf43	8q-Amp	0.313	1
C12orf43	6q-Del	0.313	1
C12orf43	Amp_1p31.3	0.313	1
RAB35	Amp_1p31.3	0.313	1
RAB35	Amp_9p24.1	0.313	1
RAB35	Del_17q25.3	0.313	1
USP28	8q-Amp	0.313	1
USP28	5q-Del	0.313	1
USP28	Amp_9p24.1	0.313	1
USP28	Del_17q25.3	0.313	1
3q-Amp	Del_8p23.3	0.313	1
EP300	11q-Del	0.315	1
FBXW7	Amp_17q12	0.315	1
FBXW7	Del_4q21.3	0.315	1
NFE2L2	13q-Del	0.315	1
NFE2L2	Amp_13q22.1	0.315	1
10q-Del	Amp_17q12	0.315	1
10q-Del	Del_16q23.1	0.315	1
11p-Del	Amp_7p11.2	0.315	1
11p-Del	Amp_21q22.13	0.315	1
11q-Del	Del_18q21.2	0.315	1
13q-Del	Amp_3q26.31	0.315	1
13q-Del	Amp_8q24.21	0.315	1
13q-Del	Amp_17q12	0.315	1
Amp_8q24.21	Amp_16p13.13	0.315	1
Amp_13q22.1	Del_4q21.3	0.315	1
Amp_16p13.13	Amp_17q12	0.315	1
Amp_16p13.13	Del_1p36.23	0.315	1
ANKRD12	5p-Amp	0.316	1
IDS	Del_8p23.3	0.316	1
LIN9	5p-Amp	0.316	1
LIN9	11q-Del	0.316	1
SMAD4	Del_8p23.3	0.316	1
20p-Amp	17p-Del	0.316	1
Xp-Del	Del_8p23.1	0.316	1
Xp-Del	Del_13q14.2	0.316	1
Del_8p23.1	Del_Xq21.33	0.316	1
Del_13q14.2	Del_Xq21.33	0.316	1
Amp_1q21.3	Del_11q25	0.317	1
Amp_11q22.1	Del_17p12	0.317	1
EP300	4q-Del	0.318	1
EP300	Del_4q22.1	0.318	1
ERBB2	Del_1p13.2	0.318	1
ERBB2	Del_Xp11.3	0.318	1
20q-Amp	Del_11q23.3	0.318	1
19p-Del	3p-Del	0.318	1
19p-Del	Del_4q35.2	0.318	1
19p-Del	Del_13q12.11	0.318	1
3p-Del	Del_1p13.2	0.318	1
4q-Del	Del_18q21.2	0.318	1
Amp_2p24.3	Del_6p24.2	0.318	1
Del_1p13.2	Del_6q26	0.318	1
Del_4q22.1	Del_18q21.2	0.318	1
Del_4q35.2	Del_Xp11.3	0.318	1
Del_6q26	Del_11q23.3	0.318	1
Del_13q12.11	Del_Xp11.3	0.318	1
PIK3CA	6q-Del	0.319	1
PIK3CA	Amp_9p24.1	0.319	1
PIK3CA	Del_17q25.3	0.319	1
STK11	Amp_15q26.1	0.319	1
Amp_3q26.31	Del_11p15.1	0.32	1
3q-Del	Del_5q35.2	0.321	1
20p-Amp	Del_5q35.2	0.322	1
Amp_5p15.33	Del_14q32.31	0.322	1
Amp_11q22.1	Del_5q12.1	0.322	1
Amp_15q26.1	Del_3p14.2	0.322	1
EP300	FAT2	0.323	1
EP300	Amp_2q33.1	0.323	1
ERBB2	Del_7q34	0.323	1
ERBB3	Amp_2p24.3	0.323	1
ERBB3	Del_18q21.2	0.323	1
5p-Amp	17p-Del	0.323	1
11p-Del	Amp_8q24.21	0.323	1
1p-Amp	20p-Amp	0.324	1
4p-Del	Amp_17q12	0.324	1
Del_5q12.1	Del_15q21.1	0.324	1
CASP8	MTOR	0.325	1
MAPK1	TRIM9	0.325	1
MTOR	RB1	0.325	1
MTOR	Del_19q13.33	0.325	1
RB1	Amp_21q22.13	0.325	1
STK11	Amp_1q21.3	0.325	1
TP53	Amp_21q22.13	0.325	1
TCTE1	Amp_1q21.3	0.325	1
Amp_21q22.13	Del_19q13.33	0.325	1
ANKRD12	NFE2L2	0.326	1
MUC4	MED1	0.326	1
ZNF578	Amp_17q12	0.326	1
IDS	NHS	0.326	1
IDS	Del_1p36.23	0.326	1
LIN9	Amp_17q12	0.326	1
LIN9	Del_1p36.23	0.326	1
NHS	SMAD4	0.326	1
SMAD4	Amp_17q12	0.326	1
5q-Del	Del_11q23.3	0.326	1
6q-Del	Del_11q23.3	0.326	1
MUC4	20q-Amp	0.328	1
MUC4	Del_6q26	0.328	1
C3orf70	FBXW7	0.329	1
BAP1	10q-Del	0.329	1
BAP1	Amp_13q22.1	0.329	1
C12orf43	18q-Del	0.329	1
C12orf43	Amp_16p13.13	0.329	1
USP28	10q-Del	0.329	1
USP28	13q-Del	0.329	1
USP28	18q-Del	0.329	1
FBXW7	20q-Amp	0.33	1
FBXW7	Del_6q26	0.33	1
20q-Amp	18q-Del	0.33	1
10q-Del	3p-Del	0.33	1
18q-Del	Del_4q35.2	0.33	1
18q-Del	Del_13q12.11	0.33	1
1p-Amp	Del_14q32.31	0.331	1
Del_14q32.31	Del_15q21.1	0.331	1
ARID1A	Amp_8q24.21	0.332	1
MUC4	1p-Amp	0.332	1
MUC4	Del_15q21.1	0.332	1
10q-Del	Amp_3q28	0.332	1
13q-Del	Amp_3q28	0.332	1
Amp_8q24.21	Del_14q32.31	0.332	1
Del_8p23.1	Del_13q14.2	0.332	1
PTEN	Del_22q13.32	0.333	1
ZNF750	Amp_1q44	0.333	1
20p-Amp	3q-Del	0.333	1
19p-Del	4p-Del	0.333	1
3p-Del	Amp_3q26.31	0.333	1
3q-Del	Del_5q12.1	0.333	1
Amp_3q26.31	Del_4q35.2	0.333	1
Amp_5p15.33	Del_16q23.1	0.333	1
Amp_6p21.33	Amp_Xq28	0.333	1
CASP8	Amp_19q13.13	0.334	1
MUC4	Del_Xq21.33	0.334	1
RB1	Del_10q23.31	0.334	1
TP53	Amp_19q13.13	0.334	1
22q-Del	Amp_19q13.13	0.334	1
22q-Del	Del_10q23.31	0.334	1
5q-Del	Del_8p23.1	0.334	1
6q-Del	Del_8p23.1	0.334	1
Amp_1p31.3	Del_8p23.1	0.334	1
Amp_17q25.1	Del_13q14.2	0.334	1
4p-Del	8p-Del	0.335	1
5q-Del	8p-Del	0.335	1
6q-Del	8p-Del	0.335	1
8p-Del	Amp_9p24.1	0.335	1
Amp_8q24.21	Del_11q23.3	0.336	1
HLA-A	STK11	0.339	1
PTEN	STK11	0.339	1
STK11	Del_22q13.32	0.339	1
TCTE1	Amp_13q34	0.339	1
TCTE1	Amp_Xq28	0.339	1
TCTE1	Del_2q22.1	0.339	1
TCTE1	Del_22q13.32	0.339	1
NHS	4q-Del	0.34	1
NHS	Del_6p24.2	0.34	1
4q-Del	Amp_17q12	0.34	1
Del_6p24.2	Del_17p12	0.34	1
5p-Amp	Xp-Del	0.342	1
11p-Del	Del_16q11.2	0.342	1
4p-Del	Amp_8q24.21	0.342	1
Xp-Del	Del_8p23.3	0.342	1
Amp_8q24.21	Del_5q35.2	0.342	1
Del_8p23.3	Del_Xq21.33	0.342	1
Del_11q25	Del_14q32.31	0.342	1
FBXW7	Del_7q34	0.343	1
HLA-B	5p-Amp	0.343	1
NFE2L2	Del_13q14.2	0.343	1
RB1	Amp_1q21.3	0.343	1
FAT2	5p-Amp	0.343	1
11q-Del	Amp_2q33.1	0.343	1
Amp_13q22.1	Del_7q34	0.343	1
Amp_17q12	Del_8p23.1	0.343	1
Amp_17q12	Del_13q14.2	0.343	1
Del_1p36.23	Del_8p23.1	0.343	1
ERBB2	8p-Del	0.344	1
ERBB3	19p-Del	0.344	1
ERBB3	Del_1p13.2	0.344	1
HLA-B	SEMA4B	0.344	1
FAT2	Del_Xp11.3	0.344	1
MED1	19p-Del	0.344	1
SEMA4B	Amp_11q13.3	0.344	1
20q-Amp	Del_5q12.1	0.344	1
19p-Del	Amp_2q33.1	0.344	1
19p-Del	Amp_11q13.3	0.344	1
Amp_2q33.1	Del_1p13.2	0.344	1
Amp_2q33.1	Del_Xp11.3	0.344	1
Amp_11q13.3	Del_1p13.2	0.344	1
USP28	Del_4q22.1	0.345	1
3q-Del	Amp_19q13.13	0.345	1
Amp_3q26.31	Del_13q14.2	0.345	1
ERBB3	Del_4q21.3	0.346	1
ERBB3	Del_16q11.2	0.346	1
ERBB3	Del_16q23.1	0.346	1
FAT2	Del_16q23.1	0.346	1
Amp_2q33.1	Del_4q21.3	0.346	1
Amp_2q33.1	Del_16q11.2	0.346	1
Amp_2q33.1	Del_16q23.1	0.346	1
Amp_11q13.3	Del_4q21.3	0.346	1
Amp_11q13.3	Del_16q11.2	0.346	1
HLA-B	Del_3p14.2	0.347	1
MED1	Amp_5p15.33	0.347	1
Amp_2q33.1	Del_3p14.2	0.347	1
Amp_11q13.3	Del_3p14.2	0.347	1
SEMA4B	Del_8p23.1	0.348	1
8q-Amp	Amp_1q21.3	0.348	1
Del_1p13.2	Del_8p23.1	0.348	1
Del_1p13.2	Del_13q14.2	0.348	1
Del_4q22.1	Del_16q23.1	0.348	1
Del_5q35.2	Del_11q23.3	0.348	1
Del_6p24.2	Del_16q11.2	0.348	1
Del_8p23.1	Del_Xp11.3	0.348	1
ZNF750	Amp_8q24.21	0.35	1
Amp_2p24.3	Del_18q21.2	0.35	1
Amp_19q13.13	Del_15q21.1	0.35	1
PTPRC	Del_11q23.3	0.352	1
Amp_11q22.1	Amp_19q13.13	0.353	1
Amp_19q13.13	Del_5q35.2	0.353	1
PIK3CA	Del_16q11.2	0.354	1
11q-Del	Del_15q21.1	0.354	1
C3orf70	Amp_3q26.31	0.355	1
ERBB2	MTOR	0.355	1
ERBB2	TRIM9	0.355	1
MTOR	ZNF750	0.355	1
ZNF578	Amp_1q44	0.355	1
BAP1	Amp_3q26.31	0.355	1
IDS	Del_17p12	0.355	1
LIN9	Amp_1q44	0.355	1
RAB35	Amp_3q26.31	0.355	1
ZNF750	Amp_21q22.13	0.355	1
11q-Del	Amp_20q11.21	0.355	1
Amp_1q44	Amp_11p12	0.355	1
TCTE1	1p-Amp	0.357	1
TCTE1	Del_15q21.1	0.357	1
FBXW7	Del_3p14.2	0.358	1
PTEN	11p-Del	0.358	1
TP53	Del_2q37.1	0.358	1
5p-Amp	Del_16q23.1	0.358	1
10q-Del	Del_3p14.2	0.358	1
11p-Del	Amp_13q34	0.358	1
11q-Del	Del_16q23.1	0.358	1
Del_4q21.3	Del_8p23.3	0.358	1
Del_8p23.3	Del_16q23.1	0.358	1
CASP8	PTPRC	0.359	1
CASP8	TP53	0.359	1
CASP8	Del_19q13.33	0.359	1
EP300	Del_11p15.1	0.359	1
PTPRC	TP53	0.359	1
PTPRC	22q-Del	0.359	1
RB1	TP53	0.359	1
TP53	22q-Del	0.359	1
20q-Amp	11q-Del	0.359	1
5p-Amp	Del_13q12.11	0.359	1
22q-Del	Del_19q13.33	0.359	1
Del_6q26	Del_8p23.3	0.359	1
ARID1A	8q-Amp	0.36	1
ARID1A	6q-Del	0.36	1
ARID1A	Del_17q25.3	0.36	1
EP300	C12orf43	0.36	1
EP300	USP28	0.36	1
C12orf43	Amp_2p24.3	0.36	1
C12orf43	Del_18q21.2	0.36	1
USP28	Amp_2p24.3	0.36	1
USP28	Del_18q21.2	0.36	1
5q-Del	Amp_7p11.2	0.36	1
6q-Del	Amp_7p11.2	0.36	1
Amp_1p31.3	Amp_7p11.2	0.36	1
Amp_1p31.3	Del_14q32.31	0.36	1
Amp_7p11.2	Amp_9p24.1	0.36	1
Amp_7p11.2	Amp_17q25.1	0.36	1
Amp_9p24.1	Del_14q32.31	0.36	1
Amp_15q26.1	Amp_17q25.1	0.36	1
Amp_19q13.13	Del_3p14.2	0.36	1
20p-Amp	8q-Amp	0.362	1
20p-Amp	Amp_9p24.1	0.362	1
6q-Del	Del_11q25	0.362	1
8p-Del	Del_13q14.2	0.362	1
Del_5q35.2	Del_8p23.1	0.362	1
ERBB3	PIK3CA	0.363	1
PIK3CA	FAT2	0.363	1
PIK3CA	MED1	0.363	1
4q-Del	Amp_8q24.21	0.363	1
Del_2q37.1	Del_13q14.2	0.363	1
C3orf70	Amp_3q28	0.364	1
HLA-A	1p-Amp	0.364	1
BAP1	Amp_3q28	0.364	1
RAB35	Amp_3q28	0.364	1
Amp_13q34	Del_20p12.1	0.364	1
Amp_Xq28	Del_15q21.1	0.364	1
Del_20p12.1	Del_22q13.32	0.364	1
ERBB2	Amp_20q11.21	0.366	1
17p-Del	Amp_21q22.13	0.366	1
Amp_13q34	Del_17p12	0.366	1
Amp_20q11.21	Del_5q35.2	0.367	1
LIN9	Amp_8q24.21	0.368	1
Xp-Del	Del_17p12	0.368	1
Del_6q26	Del_11q25	0.368	1
Del_17p12	Del_Xq21.33	0.368	1
MED1	Del_7q34	0.369	1
Amp_3q28	Del_13q14.2	0.369	1
Amp_9p24.1	Del_2q37.1	0.369	1
NFE2L2	19p-Del	0.37	1
NHS	Del_Xp11.3	0.37	1
Amp_17q12	Del_Xp11.3	0.37	1
Del_1p36.23	Del_1p13.2	0.37	1
Del_1p36.23	Del_Xp11.3	0.37	1
ANKRD12	ARID1A	0.371	1
ARID1A	ZNF578	0.371	1
ZNF578	Amp_7p11.2	0.371	1
IDS	Amp_7p11.2	0.371	1
IDS	Del_14q32.31	0.371	1
LIN9	Del_14q32.31	0.371	1
NHS	Del_11q23.3	0.371	1
SMAD4	Amp_15q26.1	0.371	1
SMAD4	Del_14q32.31	0.371	1
Amp_7p11.2	Amp_11p12	0.371	1
CASP8	11p-Del	0.372	1
RB1	11p-Del	0.372	1
TP53	11p-Del	0.372	1
20q-Amp	Del_6p24.2	0.372	1
4q-Del	Del_6q26	0.372	1
Amp_13q22.1	Del_5q35.2	0.372	1
C3orf70	3q-Amp	0.373	1
C12orf43	3q-Amp	0.373	1
20p-Amp	4p-Del	0.373	1
4p-Del	Amp_20q11.21	0.373	1
C12orf43	Del_4q21.3	0.375	1
C12orf43	Del_16q11.2	0.375	1
C12orf43	Del_16q23.1	0.375	1
USP28	Del_16q23.1	0.375	1
TCTE1	5q-Del	0.376	1
TCTE1	Amp_1p31.3	0.376	1
TCTE1	Amp_17q25.1	0.376	1
Amp_21q22.13	Del_3p14.2	0.377	1
EP300	Del_11q25	0.378	1
FBXW7	PIK3CA	0.378	1
PIK3CA	10q-Del	0.378	1
PIK3CA	Amp_16p13.13	0.378	1
PTPRC	Del_11q25	0.378	1
TP53	Del_11q25	0.378	1
10q-Del	Del_8p23.1	0.378	1
ANKRD12	Amp_20q11.21	0.381	1
EP300	Del_16q23.1	0.381	1
LIN9	Amp_20q11.21	0.381	1
Amp_2p24.3	Del_16q23.1	0.381	1
Amp_19q13.13	Del_13q12.11	0.381	1
ARID1A	1q-Amp	0.382	1
MUC4	NFE2L2	0.382	1
MUC4	NHS	0.382	1
1q-Amp	Amp_15q26.1	0.382	1
1q-Amp	Del_14q32.31	0.382	1
MTOR	Del_6q26	0.383	1
TRIM9	Del_4q35.2	0.383	1
Amp_21q22.13	Del_4q35.2	0.383	1
Amp_21q22.13	Del_6q26	0.383	1
ERBB3	MTOR	0.384	1
ERBB3	Amp_21q22.13	0.384	1
MTOR	FAT2	0.384	1
MTOR	Amp_2q33.1	0.384	1
MED1	TRIM9	0.384	1
MED1	Amp_21q22.13	0.384	1
TRIM9	Amp_11q13.3	0.384	1
Xp-Del	Amp_20q11.21	0.384	1
Amp_2q33.1	Amp_21q22.13	0.384	1
Amp_11q13.3	Amp_21q22.13	0.384	1
Amp_20q11.21	Del_Xq21.33	0.384	1
Amp_Xq28	Del_11q23.3	0.384	1
PIK3CA	Amp_19q13.13	0.385	1
EP300	17p-Del	0.386	1
ERBB2	Del_10q23.31	0.386	1
ZNF750	Del_10q23.31	0.386	1
1q-Amp	4p-Del	0.386	1
17p-Del	Amp_2p24.3	0.386	1
17p-Del	Del_18q21.2	0.386	1
EP300	Amp_1q44	0.387	1
EP300	Del_17p12	0.387	1
Amp_2p24.3	Del_17p12	0.387	1
Amp_5p15.33	Amp_Xq28	0.387	1
Del_4q35.2	Del_6q26	0.387	1
ARID1A	Amp_16p13.13	0.389	1
FBXW7	Amp_15q26.1	0.389	1
NHS	Del_16q23.1	0.389	1
13q-Del	Amp_7p11.2	0.389	1
18q-Del	Amp_7p11.2	0.389	1
18q-Del	Amp_15q26.1	0.389	1
5q-Del	Amp_19q13.13	0.389	1
6q-Del	Del_10q23.31	0.389	1
Amp_9p24.1	Del_10q23.31	0.389	1
Amp_19q13.13	Del_17q25.3	0.389	1
Del_1p36.23	Del_16q11.2	0.389	1
Del_1p36.23	Del_16q23.1	0.389	1
C3orf70	Del_7q34	0.39	1
CASP8	ERBB2	0.39	1
CASP8	ZNF750	0.39	1
ERBB2	TP53	0.39	1
MAPK1	ZNF750	0.39	1
MTOR	PIK3CA	0.39	1
TP53	ZNF750	0.39	1
C12orf43	Del_7q34	0.39	1
ERBB3	Del_5q35.2	0.391	1
HLA-B	8p-Del	0.391	1
HLA-B	Amp_11q22.1	0.391	1
HLA-B	Del_5q35.2	0.391	1
Amp_11q13.3	Del_5q35.2	0.391	1
ANKRD12	Amp_13q34	0.392	1
HLA-A	ZNF578	0.392	1
HLA-A	IDS	0.392	1
HLA-A	SMAD4	0.392	1
PTEN	IDS	0.392	1
PTEN	Amp_11p12	0.392	1
IDS	Amp_13q34	0.392	1
LIN9	Amp_6p21.33	0.392	1
LIN9	Amp_13q34	0.392	1
LIN9	Amp_Xq28	0.392	1
SEMA4B	5p-Amp	0.392	1
SEMA4B	11q-Del	0.392	1
SEMA4B	Del_8p23.3	0.392	1
SMAD4	Del_22q13.32	0.392	1
5p-Amp	19p-Del	0.392	1
5p-Amp	Del_Xp11.3	0.392	1
19p-Del	Del_8p23.3	0.392	1
Amp_11p12	Del_2q22.1	0.392	1
Amp_11p12	Del_22q13.32	0.392	1
Del_1p13.2	Del_8p23.3	0.392	1
Del_8p23.3	Del_Xp11.3	0.392	1
FBXW7	TCTE1	0.394	1
STK11	13q-Del	0.394	1
TCTE1	18q-Del	0.394	1
TCTE1	Amp_13q22.1	0.394	1
TCTE1	Amp_16p13.13	0.394	1
PTEN	Del_17q25.3	0.395	1
8q-Amp	Del_2q22.1	0.395	1
5q-Del	Amp_6p21.33	0.395	1
5q-Del	Del_2q22.1	0.395	1
Amp_1p31.3	Amp_6p21.33	0.395	1
Amp_6p21.33	Amp_17q25.1	0.395	1
Amp_9p24.1	Amp_13q34	0.395	1
Amp_9p24.1	Del_22q13.32	0.395	1
Amp_13q34	Del_17q25.3	0.395	1
Amp_16p13.13	Del_11q23.3	0.395	1
Amp_17q25.1	Del_2q22.1	0.395	1
Del_2q22.1	Del_17q25.3	0.395	1
Del_17q25.3	Del_22q13.32	0.395	1
HLA-B	Amp_1q44	0.397	1
FAT2	Del_17p12	0.397	1
LIN9	Amp_3q26.31	0.397	1
SMAD4	Amp_3q26.31	0.397	1
Amp_1q44	Amp_2q33.1	0.397	1
Amp_1q44	Amp_11q13.3	0.397	1
MUC4	Del_13q14.2	0.399	1
8q-Amp	Amp_3q26.31	0.399	1
Amp_3q26.31	Amp_17q25.1	0.399	1
20p-Amp	10q-Del	0.4	1
20p-Amp	13q-Del	0.4	1
11p-Del	Del_15q21.1	0.4	1
NHS	5p-Amp	0.401	1
20p-Amp	Del_13q14.2	0.401	1
Amp_17q12	Del_8p23.3	0.401	1
FBXW7	Amp_1q21.3	0.402	1
NHS	Del_11q25	0.402	1
Amp_17q12	Del_11q25	0.402	1
1q-Amp	3q-Del	0.403	1
5p-Amp	8q-Amp	0.403	1
11q-Del	5q-Del	0.403	1
11q-Del	Amp_9p24.1	0.403	1
11q-Del	Amp_17q25.1	0.403	1
17p-Del	3q-Del	0.403	1
5q-Del	Del_8p23.3	0.403	1
6q-Del	Del_8p23.3	0.403	1
Amp_1p31.3	Del_8p23.3	0.403	1
Amp_9p24.1	Del_8p23.3	0.403	1
C3orf70	Del_5q35.2	0.404	1
RAB35	8p-Del	0.404	1
USP28	Del_5q35.2	0.404	1
Amp_5p15.33	Del_13q14.2	0.404	1
Amp_7p11.2	Del_4q35.2	0.404	1
Amp_7p11.2	Del_13q12.11	0.404	1
Del_3p14.2	Del_8p23.1	0.404	1
Del_4q35.2	Del_14q32.31	0.404	1
HLA-A	Del_11p15.1	0.405	1
Amp_1q21.3	Del_17p12	0.405	1
PTEN	Amp_20q11.21	0.407	1
Amp_3q28	Del_3p14.2	0.407	1
Amp_20q11.21	Amp_Xq28	0.407	1
Amp_20q11.21	Del_22q13.32	0.407	1
LIN9	Amp_3q28	0.408	1
SMAD4	Amp_3q28	0.408	1
4q-Del	8p-Del	0.408	1
8p-Del	Del_6p24.2	0.408	1
ARID1A	Amp_1q21.3	0.409	1
RB1	Del_11p15.1	0.409	1
Xp-Del	Amp_1q21.3	0.409	1
Del_5q12.1	Del_11q23.3	0.409	1
Del_11p15.1	Del_19q13.33	0.409	1
C3orf70	Del_11q23.3	0.411	1
MTOR	NFE2L2	0.411	1
MTOR	NHS	0.411	1
MTOR	Amp_17q12	0.411	1
STK11	Del_4q22.1	0.411	1
TRIM9	Del_1p36.23	0.411	1
Amp_21q22.13	Del_1p36.23	0.411	1
Amp_20q11.21	Del_5q12.1	0.412	1
EP300	Del_4q35.2	0.413	1
ZNF578	Del_15q21.1	0.413	1
ZNF578	Del_20p12.1	0.413	1
IDS	Del_15q21.1	0.413	1
IDS	Del_20p12.1	0.413	1
LIN9	1p-Amp	0.413	1
LIN9	Del_15q21.1	0.413	1
LIN9	Del_20p12.1	0.413	1
20q-Amp	Del_18q21.2	0.413	1
3p-Del	Amp_2p24.3	0.413	1
Amp_2p24.3	Del_7q34	0.413	1
Amp_17q12	Del_7q34	0.413	1
Del_4q35.2	Del_18q21.2	0.413	1
Del_13q12.11	Del_18q21.2	0.413	1
ERBB3	Del_5q12.1	0.414	1
HLA-B	20p-Amp	0.414	1
HLA-B	Del_5q12.1	0.414	1
MED1	Del_5q12.1	0.414	1
1q-Amp	Del_17p12	0.414	1
20q-Amp	3q-Del	0.414	1
3q-Del	Del_4q35.2	0.414	1
3q-Del	Del_6q26	0.414	1
3q-Del	Del_13q12.11	0.414	1
Del_4q21.3	Del_16q11.2	0.414	1
Del_4q21.3	Del_16q23.1	0.414	1
STK11	Amp_5p15.33	0.415	1
STK11	Del_3p14.2	0.415	1
TCTE1	Del_3p14.2	0.415	1
MTOR	Del_8p23.1	0.416	1
TRIM9	Del_8p23.1	0.416	1
Amp_21q22.13	Del_8p23.1	0.416	1
MUC4	Del_5q35.2	0.417	1
4q-Del	Amp_15q26.1	0.417	1
Xp-Del	Del_2q37.1	0.417	1
Amp_3q28	Del_17q25.3	0.417	1
Amp_15q26.1	Del_6p24.2	0.417	1
Del_4q22.1	Del_14q32.31	0.417	1
ARID1A	19p-Del	0.418	1
ARID1A	Del_1p13.2	0.418	1
C3orf70	Del_5q12.1	0.418	1
C12orf43	20p-Amp	0.418	1
SEMA4B	Amp_7p11.2	0.418	1
USP28	Del_5q12.1	0.418	1
19p-Del	Amp_7p11.2	0.418	1
Amp_7p11.2	Del_1p13.2	0.418	1
Amp_7p11.2	Del_Xp11.3	0.418	1
Del_1p13.2	Del_14q32.31	0.418	1
ANKRD12	Amp_1q21.3	0.42	1
PTEN	Del_11q25	0.42	1
ZNF578	Amp_1q21.3	0.42	1
LIN9	Amp_1q21.3	0.42	1
Amp_Xq28	Del_11q25	0.42	1
CASP8	FAT2	0.421	1
CASP8	MED1	0.421	1
CASP8	Amp_2q33.1	0.421	1
CASP8	Amp_11q13.3	0.421	1
ERBB3	PTPRC	0.421	1
ERBB3	TP53	0.421	1
HLA-B	MAPK1	0.421	1
HLA-B	PTPRC	0.421	1
HLA-B	Del_19q13.33	0.421	1
KRAS	PTPRC	0.421	1
KRAS	TP53	0.421	1
MAPK1	FAT2	0.421	1
MAPK1	MED1	0.421	1
PTPRC	MED1	0.421	1
PTPRC	Amp_2q33.1	0.421	1
RB1	FAT2	0.421	1
RB1	MED1	0.421	1
TP53	MED1	0.421	1
TP53	Amp_2q33.1	0.421	1
TP53	Amp_11q13.3	0.421	1
FAT2	22q-Del	0.421	1
NHS	Amp_5p15.33	0.421	1
NHS	Del_3p14.2	0.421	1
22q-Del	Amp_11q13.3	0.421	1
Amp_5p15.33	Del_1p36.23	0.421	1
Amp_11q13.3	Del_19q13.33	0.421	1
1q-Amp	11p-Del	0.423	1
4q-Del	Del_8p23.1	0.423	1
Amp_1q21.3	Del_13q12.11	0.423	1
Del_6p24.2	Del_13q14.2	0.423	1
ERBB2	ZNF750	0.424	1
FBXW7	Amp_13q34	0.425	1
HLA-A	10q-Del	0.425	1
HLA-A	13q-Del	0.425	1
HLA-A	Amp_16p13.13	0.425	1
PTEN	13q-Del	0.425	1
10q-Del	Amp_6p21.33	0.425	1
3q-Del	4p-Del	0.425	1
Amp_16p13.13	Amp_Xq28	0.425	1
TRIM9	Amp_3q26.31	0.426	1
3q-Amp	Del_11p15.1	0.426	1
4p-Del	Amp_7p11.2	0.426	1
CASP8	1q-Amp	0.427	1
CASP8	17p-Del	0.427	1
MUC4	10q-Del	0.427	1
MUC4	Amp_13q22.1	0.427	1
TP53	1q-Amp	0.427	1
17p-Del	Del_16q23.1	0.427	1
EP300	STK11	0.428	1
EP300	TCTE1	0.428	1
TCTE1	Del_18q21.2	0.428	1
1p-Amp	Amp_9p24.1	0.428	1
1p-Amp	Del_17q25.3	0.428	1
8q-Amp	Del_20p12.1	0.428	1
Amp_9p24.1	Del_15q21.1	0.428	1
Amp_17q25.1	Del_15q21.1	0.428	1
Del_17q25.3	Del_20p12.1	0.428	1
C3orf70	Del_11q25	0.429	1
HLA-A	1q-Amp	0.429	1
PTEN	17p-Del	0.429	1
1q-Amp	Amp_Xq28	0.429	1
17p-Del	Amp_13q34	0.429	1
17p-Del	Del_2q22.1	0.429	1
Amp_3q26.31	Del_16q11.2	0.429	1
Amp_8q24.21	Amp_19q13.13	0.43	1
ERBB2	Del_2q37.1	0.432	1
HLA-B	Amp_20q11.21	0.432	1
BAP1	Del_10q23.31	0.432	1
USP28	Amp_19q13.13	0.432	1
USP28	Del_10q23.31	0.432	1
17p-Del	Amp_5p15.33	0.432	1
Amp_2q33.1	Amp_20q11.21	0.432	1
Amp_11q13.3	Amp_20q11.21	0.432	1
ZNF578	6q-Del	0.433	1
ZNF578	Amp_17q25.1	0.433	1
IDS	Amp_9p24.1	0.433	1
IDS	Del_17q25.3	0.433	1
LIN9	Amp_9p24.1	0.433	1
LIN9	Amp_17q25.1	0.433	1
LIN9	Del_17q25.3	0.433	1
SMAD4	Amp_17q25.1	0.433	1
SMAD4	Del_17q25.3	0.433	1
5p-Amp	Del_8p23.1	0.433	1
19p-Del	Del_11q23.3	0.433	1
6q-Del	Amp_11p12	0.433	1
Amp_1p31.3	Amp_11p12	0.433	1
Amp_11p12	Amp_17q25.1	0.433	1
Amp_11p12	Del_17q25.3	0.433	1
PIK3CA	Del_8p23.1	0.434	1
4q-Del	Amp_3q28	0.434	1
Amp_3q28	Del_4q22.1	0.434	1
Amp_16p13.13	Del_11q25	0.434	1
Amp_20q11.21	Del_11p15.1	0.434	1
HLA-B	Del_10q23.31	0.436	1
19p-Del	Amp_1q44	0.436	1
19p-Del	Del_17p12	0.436	1
3q-Del	Del_13q14.2	0.436	1
Amp_1q44	Del_1p13.2	0.436	1
Amp_11q13.3	Amp_19q13.13	0.436	1
Amp_11q13.3	Del_10q23.31	0.436	1
NHS	Amp_11q22.1	0.437	1
20p-Amp	Del_6p24.2	0.437	1
8p-Del	Amp_17q12	0.437	1
8p-Del	Del_1p36.23	0.437	1
Amp_11q22.1	Del_1p36.23	0.437	1
Del_1p36.23	Del_5q35.2	0.437	1
Del_7q34	Del_11p15.1	0.437	1
PIK3CA	Del_6p24.2	0.438	1
TRIM9	Amp_3q28	0.438	1
Amp_1q44	Del_2q37.1	0.439	1
Amp_20q11.21	Del_3p14.2	0.44	1
HLA-A	19p-Del	0.441	1
PTEN	SEMA4B	0.441	1
SEMA4B	Amp_13q34	0.441	1
SEMA4B	Del_22q13.32	0.441	1
Amp_6p21.33	Del_1p13.2	0.441	1
Amp_13q34	Del_1p13.2	0.441	1
Del_1p13.2	Del_2q22.1	0.441	1
3q-Amp	Del_2q37.1	0.442	1
Amp_1q21.3	Del_5q35.2	0.443	1
ARID1A	Amp_2p24.3	0.444	1
EP300	Amp_15q26.1	0.444	1
EP300	Del_5q35.2	0.444	1
Amp_7p11.2	Del_18q21.2	0.444	1
Amp_15q26.1	Del_18q21.2	0.444	1
PTPRC	Del_4q35.2	0.445	1
STK11	Del_4q21.3	0.445	1
STK11	Del_16q23.1	0.445	1
20q-Amp	Del_19q13.33	0.445	1
Del_5q35.2	Del_8p23.3	0.445	1
Amp_7p11.2	Del_8p23.1	0.448	1
MUC4	Amp_21q22.13	0.449	1
Amp_3q28	Del_16q11.2	0.449	1
CASP8	NFE2L2	0.45	1
CASP8	NHS	0.45	1
NFE2L2	PTPRC	0.45	1
NFE2L2	TP53	0.45	1
RB1	NHS	0.45	1
RB1	Amp_17q12	0.45	1
TP53	Amp_17q12	0.45	1
NHS	22q-Del	0.45	1
22q-Del	Del_1p36.23	0.45	1
Amp_17q12	Del_19q13.33	0.45	1
Del_11p15.1	Del_15q21.1	0.45	1
SEMA4B	Amp_8q24.21	0.451	1
5p-Amp	Amp_16p13.13	0.451	1
11q-Del	18q-Del	0.451	1
Amp_3q26.31	Amp_8q24.21	0.451	1
Del_3p14.2	Del_15q21.1	0.451	1
ANKRD12	10q-Del	0.452	1
ANKRD12	13q-Del	0.452	1
ANKRD12	Amp_13q22.1	0.452	1
FBXW7	Amp_11p12	0.452	1
HLA-A	Del_6q26	0.452	1
PTEN	20q-Amp	0.452	1
PTEN	Del_13q12.11	0.452	1
ZNF578	Amp_16p13.13	0.452	1
IDS	18q-Del	0.452	1
IDS	Amp_13q22.1	0.452	1
LIN9	Amp_13q22.1	0.452	1
LIN9	Amp_16p13.13	0.452	1
20q-Amp	Del_2q22.1	0.452	1
20q-Amp	Del_22q13.32	0.452	1
Amp_11p12	Amp_16p13.13	0.452	1
HLA-A	Del_6p24.2	0.454	1
PTEN	4q-Del	0.454	1
PTEN	Del_4q22.1	0.454	1
3q-Amp	Del_17q25.3	0.454	1
Amp_1q44	Del_6q26	0.454	1
Amp_1q44	Del_13q12.11	0.454	1
Amp_6p21.33	Del_4q22.1	0.454	1
Amp_13q34	Del_4q22.1	0.454	1
Amp_13q34	Del_6p24.2	0.454	1
Amp_Xq28	Del_6p24.2	0.454	1
Del_6p24.2	Del_22q13.32	0.454	1
3p-Del	Del_13q14.2	0.455	1
Amp_1q21.3	Del_6p24.2	0.455	1
Del_4q35.2	Del_8p23.1	0.455	1
Del_4q35.2	Del_13q14.2	0.455	1
Del_6q26	Del_13q14.2	0.455	1
Del_8p23.1	Del_13q12.11	0.455	1
ERBB2	HLA-B	0.456	1
ERBB2	FAT2	0.456	1
ERBB2	Amp_2q33.1	0.456	1
ERBB3	ZNF750	0.456	1
19p-Del	Del_11q25	0.458	1
Del_11q25	Del_Xp11.3	0.458	1
C3orf70	11p-Del	0.459	1
BAP1	11p-Del	0.459	1
NHS	Del_17p12	0.459	1
Amp_1q44	Amp_17q12	0.459	1
Amp_1q44	Del_1p36.23	0.459	1
Amp_8q24.21	Del_4q21.3	0.459	1
Amp_8q24.21	Del_16q11.2	0.459	1
Amp_17q12	Del_17p12	0.459	1
Del_1p36.23	Del_17p12	0.459	1
FBXW7	1p-Amp	0.46	1
FBXW7	Del_20p12.1	0.46	1
NFE2L2	20p-Amp	0.461	1
STK11	Del_7q34	0.461	1
NHS	20p-Amp	0.461	1
20p-Amp	Amp_17q12	0.461	1
5p-Amp	Del_17p12	0.461	1
8q-Amp	5q-Del	0.461	1
8q-Amp	6q-Del	0.461	1
8q-Amp	Amp_1p31.3	0.461	1
Amp_1p31.3	Amp_9p24.1	0.461	1
Amp_1p31.3	Del_17q25.3	0.461	1
Del_1p36.23	Del_5q12.1	0.461	1
ARID1A	Amp_21q22.13	0.463	1
MTOR	Amp_15q26.1	0.463	1
TRIM9	Del_14q32.31	0.463	1
3q-Amp	Amp_7p11.2	0.463	1
22q-Del	Amp_5p15.33	0.463	1
22q-Del	Del_3p14.2	0.463	1
Amp_20q11.21	Del_15q21.1	0.463	1
Amp_20q11.21	Del_20p12.1	0.463	1
1p-Amp	Del_Xp11.3	0.464	1
19p-Del	Del_20p12.1	0.464	1
Del_1p13.2	Del_15q21.1	0.464	1
Del_20p12.1	Del_Xp11.3	0.464	1
MTOR	Del_8p23.3	0.465	1
11q-Del	Amp_21q22.13	0.465	1
Amp_3q26.31	Amp_17q12	0.466	1
Del_6p24.2	Del_10q23.31	0.467	1
11q-Del	3q-Del	0.468	1
Amp_20q11.21	Del_17p12	0.468	1
HLA-A	Amp_1q21.3	0.469	1
ANKRD12	Del_6p24.2	0.471	1
ZNF578	Del_4q22.1	0.471	1
ZNF578	Del_6p24.2	0.471	1
IDS	Del_6p24.2	0.471	1
LIN9	Del_4q22.1	0.471	1
LIN9	Del_6p24.2	0.471	1
SMAD4	4q-Del	0.471	1
3q-Amp	Del_8p23.1	0.471	1
Xp-Del	Del_3p14.2	0.471	1
Amp_1q21.3	Del_2q37.1	0.471	1
Amp_11p12	Del_6p24.2	0.471	1
Amp_15q26.1	Del_16q23.1	0.471	1
Del_3p14.2	Del_Xq21.33	0.471	1
Del_4q21.3	Del_14q32.31	0.471	1
MED1	3q-Amp	0.473	1
3q-Amp	Amp_2q33.1	0.473	1
3q-Amp	Amp_11q13.3	0.473	1
MUC4	4q-Del	0.474	1
1q-Amp	Del_15q21.1	0.475	1
4p-Del	Del_2q22.1	0.475	1
17p-Del	Amp_20q11.21	0.476	1
TCTE1	8p-Del	0.477	1
TCTE1	Amp_11q22.1	0.477	1
CASP8	PIK3CA	0.478	1
Amp_8q24.21	Amp_17q12	0.478	1
ERBB3	11p-Del	0.479	1
HLA-B	11p-Del	0.479	1
PIK3CA	Del_Xq21.33	0.479	1
11p-Del	Amp_11q13.3	0.479	1
8p-Del	Del_16q23.1	0.479	1
Amp_5p15.33	Del_6q26	0.48	1
RB1	Del_13q14.2	0.481	1
TP53	Del_8p23.1	0.481	1
Amp_3q28	Amp_8q24.21	0.481	1
Amp_3q28	Amp_17q12	0.481	1
Del_13q14.2	Del_19q13.33	0.481	1
EP300	Amp_6p21.33	0.482	1
Amp_2p24.3	Amp_13q34	0.482	1
Amp_13q34	Del_18q21.2	0.482	1
NFE2L2	Del_10q23.31	0.484	1
11p-Del	13q-Del	0.484	1
11p-Del	Amp_13q22.1	0.484	1
Amp_17q12	Amp_19q13.13	0.484	1
Amp_17q12	Del_10q23.31	0.484	1
C3orf70	Del_11p15.1	0.485	1
ERBB2	1q-Amp	0.485	1
ERBB2	17p-Del	0.485	1
HLA-B	Amp_1q21.3	0.485	1
BAP1	Del_11p15.1	0.485	1
SEMA4B	8q-Amp	0.485	1
SEMA4B	5q-Del	0.485	1
SEMA4B	Amp_9p24.1	0.485	1
TRIM9	3q-Amp	0.485	1
8q-Amp	19p-Del	0.485	1
19p-Del	5q-Del	0.485	1
5q-Del	Del_1p13.2	0.485	1
5q-Del	Del_Xp11.3	0.485	1
6q-Del	Del_1p13.2	0.485	1
Amp_1p31.3	Del_Xp11.3	0.485	1
Amp_1q21.3	Amp_2q33.1	0.485	1
Amp_1q21.3	Amp_11q13.3	0.485	1
Amp_9p24.1	Del_Xp11.3	0.485	1
Amp_17q25.1	Del_Xp11.3	0.485	1
Del_17q25.3	Del_Xp11.3	0.485	1
ERBB2	NFE2L2	0.486	1
ERBB2	NHS	0.486	1
ERBB2	Amp_17q12	0.486	1
ZNF750	Amp_17q12	0.486	1
20q-Amp	Amp_8q24.21	0.486	1
11p-Del	Amp_19q13.13	0.486	1
MTOR	Amp_6p21.33	0.487	1
MTOR	Del_22q13.32	0.487	1
PTEN	Amp_21q22.13	0.487	1
TRIM9	Amp_6p21.33	0.487	1
TRIM9	Amp_13q34	0.487	1
20p-Amp	5p-Amp	0.487	1
Amp_6p21.33	Amp_21q22.13	0.487	1
Amp_21q22.13	Del_2q22.1	0.487	1
PIK3CA	11p-Del	0.488	1
11p-Del	Amp_1q44	0.488	1
HLA-A	Del_2q37.1	0.489	1
HLA-B	Amp_2q33.1	0.489	1
FAT2	Amp_11q13.3	0.489	1
MED1	Amp_2q33.1	0.489	1
EP300	IDS	0.49	1
ZNF578	Amp_2p24.3	0.49	1
IDS	Del_18q21.2	0.49	1
LIN9	Amp_2p24.3	0.49	1
4q-Del	Del_20p12.1	0.49	1
MUC4	Amp_15q26.1	0.491	1
MUC4	Amp_20q11.21	0.491	1
MUC4	Del_14q32.31	0.491	1
4p-Del	Del_8p23.1	0.491	1
FBXW7	6q-Del	0.493	1
FBXW7	Amp_1p31.3	0.493	1
FBXW7	Amp_17q25.1	0.493	1
8q-Amp	10q-Del	0.493	1
8q-Amp	13q-Del	0.493	1
8q-Amp	18q-Del	0.493	1
10q-Del	6q-Del	0.493	1
13q-Del	Amp_17q25.1	0.493	1
18q-Del	Amp_9p24.1	0.493	1
18q-Del	Del_17q25.3	0.493	1
Amp_1p31.3	Amp_13q22.1	0.493	1
Amp_9p24.1	Amp_13q22.1	0.493	1
Amp_9p24.1	Amp_16p13.13	0.493	1
Amp_13q22.1	Del_17q25.3	0.493	1
Amp_16p13.13	Del_17q25.3	0.493	1
Amp_3q26.31	Del_15q21.1	0.494	1
Amp_17q25.1	Del_11p15.1	0.494	1
Del_6q26	Del_7q34	0.495	1
Del_11q25	Del_15q21.1	0.497	1
PTEN	Del_8p23.1	0.498	1
BAP1	17p-Del	0.498	1
C12orf43	17p-Del	0.498	1
RAB35	17p-Del	0.498	1
3q-Del	Amp_1q44	0.498	1
3q-Del	Del_17p12	0.498	1
Amp_7p11.2	Del_7q34	0.498	1
Amp_Xq28	Del_13q14.2	0.498	1
20q-Amp	Del_15q21.1	0.499	1
20q-Amp	Del_20p12.1	0.499	1
5p-Amp	4q-Del	0.499	1
5p-Amp	Del_6p24.2	0.499	1
11q-Del	Del_6p24.2	0.499	1
3p-Del	Del_20p12.1	0.499	1
4q-Del	Del_8p23.3	0.499	1
Del_6q26	Del_15q21.1	0.499	1
Del_13q12.11	Del_20p12.1	0.499	1
MUC4	Del_10q23.31	0.5	1
FAT2	Del_2q37.1	0.502	1
MED1	Del_2q37.1	0.502	1
Amp_11q13.3	Del_2q37.1	0.502	1
ARID1A	CASP8	0.504	1
ARID1A	22q-Del	0.504	1
CASP8	Amp_7p11.2	0.504	1
CASP8	Amp_15q26.1	0.504	1
CASP8	Del_14q32.31	0.504	1
EP300	Del_10q23.31	0.504	1
MAPK1	Amp_15q26.1	0.504	1
PTPRC	Del_14q32.31	0.504	1
RB1	Amp_15q26.1	0.504	1
RB1	Del_14q32.31	0.504	1
TP53	Amp_15q26.1	0.504	1
Amp_7p11.2	Del_19q13.33	0.504	1
ERBB2	20q-Amp	0.505	1
ERBB2	Del_6q26	0.505	1
10q-Del	Amp_3q26.31	0.505	1
Amp_3q26.31	Amp_13q22.1	0.505	1
Amp_8q24.21	Amp_20q11.21	0.505	1
FBXW7	19p-Del	0.506	1
MUC4	11q-Del	0.506	1
MUC4	Del_8p23.3	0.506	1
SEMA4B	10q-Del	0.506	1
SEMA4B	Amp_13q22.1	0.506	1
SEMA4B	Amp_16p13.13	0.506	1
13q-Del	19p-Del	0.506	1
13q-Del	Del_Xp11.3	0.506	1
18q-Del	Del_Xp11.3	0.506	1
19p-Del	Amp_13q22.1	0.506	1
19p-Del	Amp_16p13.13	0.506	1
Amp_13q22.1	Del_1p13.2	0.506	1
EP300	Amp_1q21.3	0.507	1
ANKRD12	Del_16q11.2	0.508	1
ANKRD12	Del_16q23.1	0.508	1
STK11	Del_10q23.31	0.508	1
ZNF578	Del_16q11.2	0.508	1
IDS	Del_4q21.3	0.508	1
IDS	Del_16q23.1	0.508	1
LIN9	Del_16q11.2	0.508	1
SMAD4	Del_16q11.2	0.508	1
SMAD4	Del_16q23.1	0.508	1
TCTE1	Amp_19q13.13	0.508	1
TCTE1	Del_10q23.31	0.508	1
19p-Del	Amp_1q21.3	0.508	1
Amp_1q21.3	Del_1p13.2	0.508	1
Amp_11p12	Del_4q21.3	0.508	1
PIK3CA	20q-Amp	0.509	1
PIK3CA	Del_6q26	0.509	1
3q-Amp	Del_16q11.2	0.509	1
HLA-A	Del_16q23.1	0.51	1
PTEN	Del_4q21.3	0.51	1
TRIM9	1p-Amp	0.51	1
Amp_6p21.33	Del_4q21.3	0.51	1
Amp_6p21.33	Del_16q23.1	0.51	1
Amp_21q22.13	Del_20p12.1	0.51	1
Del_4q21.3	Del_8p23.1	0.51	1
Del_16q11.2	Del_22q13.32	0.51	1
Del_16q23.1	Del_22q13.32	0.51	1
BAP1	Del_4q35.2	0.511	1
C12orf43	20q-Amp	0.511	1
C12orf43	3p-Del	0.511	1
C12orf43	Del_6q26	0.511	1
C12orf43	Del_13q12.11	0.511	1
RAB35	3p-Del	0.511	1
USP28	3p-Del	0.511	1
USP28	Del_4q35.2	0.511	1
USP28	Del_6q26	0.511	1
USP28	Del_13q12.11	0.511	1
Amp_3q28	Del_15q21.1	0.511	1
TRIM9	Amp_1q44	0.512	1
Amp_1q44	Del_3p14.2	0.512	1
Amp_5p15.33	Del_17p12	0.512	1
20p-Amp	Del_11p15.1	0.513	1
11q-Del	Amp_15q26.1	0.513	1
11q-Del	Del_14q32.31	0.513	1
Amp_7p11.2	Del_8p23.3	0.513	1
Amp_17q25.1	Del_3p14.2	0.514	1
8q-Amp	Amp_20q11.21	0.517	1
3p-Del	Amp_20q11.21	0.517	1
6q-Del	Amp_20q11.21	0.517	1
Amp_20q11.21	Del_4q35.2	0.517	1
3q-Del	Amp_20q11.21	0.518	1
Amp_20q11.21	Del_2q37.1	0.518	1
ANKRD12	Amp_5p15.33	0.52	1
ANKRD12	Del_3p14.2	0.52	1
ERBB3	NFE2L2	0.52	1
ERBB3	NHS	0.52	1
ERBB3	Del_11p15.1	0.52	1
HLA-B	Del_11p15.1	0.52	1
KRAS	Del_1p36.23	0.52	1
NFE2L2	Amp_2q33.1	0.52	1
NFE2L2	Amp_11q13.3	0.52	1
PIK3CA	20p-Amp	0.52	1
ZNF578	Del_3p14.2	0.52	1
IDS	Amp_5p15.33	0.52	1
LIN9	Amp_5p15.33	0.52	1
LIN9	Del_3p14.2	0.52	1
MED1	NHS	0.52	1
MED1	Amp_17q12	0.52	1
NHS	Amp_2q33.1	0.52	1
NHS	Amp_11q13.3	0.52	1
1q-Amp	Amp_9p24.1	0.52	1
17p-Del	6q-Del	0.52	1
17p-Del	Amp_17q25.1	0.52	1
Amp_2q33.1	Del_1p36.23	0.52	1
Amp_2q33.1	Del_11p15.1	0.52	1
Amp_11q13.3	Del_1p36.23	0.52	1
Amp_11q13.3	Del_11p15.1	0.52	1
Del_1p13.2	Del_2q37.1	0.521	1
Del_2q37.1	Del_Xp11.3	0.521	1
3q-Amp	13q-Del	0.522	1
3q-Amp	Amp_13q22.1	0.522	1
Amp_13q22.1	Del_17p12	0.522	1
Amp_16p13.13	Del_17p12	0.522	1
C3orf70	4p-Del	0.523	1
BAP1	4p-Del	0.523	1
8p-Del	Del_14q32.31	0.523	1
Amp_7p11.2	Del_5q35.2	0.523	1
4q-Del	6q-Del	0.524	1
4q-Del	Amp_9p24.1	0.524	1
Amp_3q28	Amp_13q22.1	0.524	1
Amp_9p24.1	Del_4q22.1	0.524	1
Del_4q22.1	Del_17q25.3	0.524	1
Del_6p24.2	Del_17q25.3	0.524	1
ZNF578	Del_7q34	0.525	1
LIN9	Del_7q34	0.525	1
SMAD4	Del_7q34	0.525	1
SEMA4B	4q-Del	0.526	1
SEMA4B	Del_6p24.2	0.526	1
18q-Del	Amp_13q22.1	0.526	1
19p-Del	4q-Del	0.526	1
19p-Del	Del_4q22.1	0.526	1
Del_1p13.2	Del_4q22.1	0.526	1
Del_6p24.2	Del_Xp11.3	0.526	1
20q-Amp	Del_11p15.1	0.527	1
NHS	11p-Del	0.528	1
11p-Del	Del_1p36.23	0.528	1
CASP8	PTEN	0.529	1
CASP8	Amp_13q34	0.529	1
CASP8	Amp_Xq28	0.529	1
HLA-A	TP53	0.529	1
HLA-A	22q-Del	0.529	1
MAPK1	PTEN	0.529	1
PTEN	PTPRC	0.529	1
PTEN	RB1	0.529	1
PTEN	Del_19q13.33	0.529	1
PTPRC	Amp_6p21.33	0.529	1
PTPRC	Del_2q22.1	0.529	1
PTPRC	Del_22q13.32	0.529	1
RB1	Amp_Xq28	0.529	1
RB1	Del_2q22.1	0.529	1
RB1	Del_22q13.32	0.529	1
TP53	Del_22q13.32	0.529	1
1q-Amp	17p-Del	0.529	1
22q-Del	Amp_13q34	0.529	1
Del_2q22.1	Del_19q13.33	0.529	1
Del_11q25	Del_13q12.11	0.529	1
MUC4	Del_11q23.3	0.53	1
EP300	Del_2q37.1	0.531	1
EP300	Del_11q23.3	0.531	1
3q-Amp	Del_Xq21.33	0.531	1
Amp_1q21.3	Del_11q23.3	0.531	1
ANKRD12	PIK3CA	0.532	1
PIK3CA	LIN9	0.532	1
PIK3CA	SMAD4	0.532	1
Del_3p14.2	Del_16q11.2	0.532	1
CASP8	11q-Del	0.533	1
MTOR	8q-Amp	0.533	1
MTOR	6q-Del	0.533	1
MTOR	Amp_9p24.1	0.533	1
MTOR	Amp_17q25.1	0.533	1
MTOR	Del_17q25.3	0.533	1
PTPRC	5p-Amp	0.533	1
PTPRC	Del_8p23.3	0.533	1
RB1	5p-Amp	0.533	1
TP53	5p-Amp	0.533	1
TP53	11q-Del	0.533	1
TP53	Del_8p23.3	0.533	1
TRIM9	Amp_1p31.3	0.533	1
3q-Amp	Del_4q35.2	0.533	1
3q-Amp	Del_6q26	0.533	1
6q-Del	Amp_21q22.13	0.533	1
Amp_1q44	Del_13q14.2	0.533	1
Amp_15q26.1	Del_11q23.3	0.533	1
Amp_21q22.13	Del_17q25.3	0.533	1
KRAS	Del_11q23.3	0.535	1
PIK3CA	8q-Amp	0.535	1
C12orf43	Del_8p23.1	0.535	1
C12orf43	Del_13q14.2	0.535	1
RAB35	Del_8p23.1	0.535	1
USP28	Del_13q14.2	0.535	1
3p-Del	8p-Del	0.535	1
3p-Del	Amp_11q22.1	0.535	1
8p-Del	Del_6q26	0.535	1
Amp_2q33.1	Del_11q23.3	0.535	1
Amp_11q22.1	Del_4q35.2	0.535	1
3q-Amp	Amp_13q34	0.536	1
3q-Amp	Del_2q22.1	0.536	1
Amp_6p21.33	Del_7q34	0.537	1
Amp_Xq28	Del_7q34	0.537	1
Del_2q22.1	Del_7q34	0.537	1
Amp_21q22.13	Del_11q23.3	0.538	1
HLA-B	1q-Amp	0.54	1
HLA-B	17p-Del	0.54	1
KRAS	17p-Del	0.54	1
FAT2	1q-Amp	0.54	1
1q-Amp	Amp_11q13.3	0.54	1
Del_10q23.31	Del_16q11.2	0.54	1
5p-Amp	Del_8p23.3	0.541	1
ANKRD12	Amp_11q22.1	0.542	1
ARID1A	ERBB2	0.542	1
ERBB2	Del_14q32.31	0.542	1
ZNF578	8p-Del	0.542	1
ZNF578	Del_5q35.2	0.542	1
LIN9	8p-Del	0.542	1
LIN9	Amp_11q22.1	0.542	1
SMAD4	Amp_11q22.1	0.542	1
SMAD4	Del_5q35.2	0.542	1
ZNF750	Amp_15q26.1	0.542	1
ZNF750	Del_8p23.1	0.542	1
ZNF750	Del_14q32.31	0.542	1
5p-Amp	Del_3p14.2	0.542	1
Amp_11p12	Amp_11q22.1	0.542	1
STK11	Del_11q23.3	0.544	1
20q-Amp	6q-Del	0.544	1
6q-Del	Del_4q35.2	0.544	1
Amp_9p24.1	Del_6q26	0.544	1
Amp_9p24.1	Del_13q12.11	0.544	1
Amp_17q25.1	Del_13q12.11	0.544	1
EP300	SEMA4B	0.545	1
EP300	Del_Xp11.3	0.545	1
SEMA4B	Amp_2p24.3	0.545	1
Amp_2p24.3	Del_Xp11.3	0.545	1
Del_18q21.2	Del_Xp11.3	0.545	1
1p-Amp	Del_8p23.1	0.546	1
18q-Del	Amp_8q24.21	0.546	1
3q-Del	Amp_1q21.3	0.546	1
8p-Del	Amp_11q22.1	0.546	1
8p-Del	Del_5q35.2	0.546	1
Amp_3q28	Del_7q34	0.546	1
Del_13q14.2	Del_20p12.1	0.546	1
Del_4q21.3	Del_15q21.1	0.547	1
20p-Amp	Amp_7p11.2	0.548	1
20p-Amp	Amp_15q26.1	0.548	1
20p-Amp	Del_14q32.31	0.548	1
Amp_3q28	Del_17p12	0.548	1
Amp_7p11.2	Del_5q12.1	0.548	1
Amp_15q26.1	Del_5q12.1	0.548	1
Amp_19q13.13	Del_11p15.1	0.549	1
3q-Del	Amp_3q28	0.551	1
NFE2L2	Amp_17q12	0.552	1
NHS	Amp_17q12	0.552	1
Amp_8q24.21	Amp_11q22.1	0.552	1
CASP8	1p-Amp	0.553	1
PTPRC	1p-Amp	0.553	1
PTPRC	Del_20p12.1	0.553	1
1p-Amp	Del_19q13.33	0.553	1
22q-Del	Del_20p12.1	0.553	1
Del_19q13.33	Del_20p12.1	0.553	1
EP300	5q-Del	0.554	1
EP300	6q-Del	0.554	1
FBXW7	MTOR	0.554	1
FBXW7	Amp_21q22.13	0.554	1
MTOR	Amp_16p13.13	0.554	1
NHS	3q-Amp	0.554	1
TCTE1	Amp_3q26.31	0.554	1
TRIM9	13q-Del	0.554	1
TRIM9	Amp_13q22.1	0.554	1
20q-Amp	Del_8p23.3	0.554	1
8q-Amp	Del_18q21.2	0.554	1
18q-Del	Amp_21q22.13	0.554	1
Amp_2p24.3	Amp_9p24.1	0.554	1
Amp_9p24.1	Del_18q21.2	0.554	1
Del_4q35.2	Del_8p23.3	0.554	1
Del_17q25.3	Del_18q21.2	0.554	1
ANKRD12	20p-Amp	0.558	1
ANKRD12	Del_5q12.1	0.558	1
FBXW7	Del_4q22.1	0.558	1
FBXW7	Del_6p24.2	0.558	1
MUC4	C12orf43	0.558	1
ZNF578	Del_5q12.1	0.558	1
IDS	20p-Amp	0.558	1
LIN9	20p-Amp	0.558	1
SMAD4	20p-Amp	0.558	1
SMAD4	Del_5q12.1	0.558	1
20p-Amp	Amp_11p12	0.558	1
18q-Del	Del_6p24.2	0.558	1
Amp_1q21.3	Del_16q23.1	0.558	1
ERBB3	Del_6q26	0.56	1
ERBB3	Del_13q12.11	0.56	1
HLA-B	Del_13q12.11	0.56	1
KRAS	20q-Amp	0.56	1
KRAS	Del_6q26	0.56	1
KRAS	Del_13q12.11	0.56	1
FAT2	Del_4q35.2	0.56	1
FAT2	Del_13q12.11	0.56	1
MED1	20q-Amp	0.56	1
MED1	3p-Del	0.56	1
20q-Amp	Amp_11q13.3	0.56	1
3p-Del	Amp_2q33.1	0.56	1
Amp_2q33.1	Del_4q35.2	0.56	1
Amp_2q33.1	Del_13q12.11	0.56	1
Amp_11q13.3	Del_4q35.2	0.56	1
FBXW7	1q-Amp	0.562	1
1q-Amp	Del_6q26	0.562	1
20q-Amp	17p-Del	0.562	1
8p-Del	Amp_13q34	0.563	1
8p-Del	Del_2q22.1	0.563	1
Amp_6p21.33	Del_5q35.2	0.563	1
Amp_11q22.1	Amp_13q34	0.563	1
Del_2q22.1	Del_5q35.2	0.563	1
Del_5q35.2	Del_22q13.32	0.563	1
HLA-A	5p-Amp	0.564	1
PTEN	Del_8p23.3	0.564	1
TCTE1	Amp_3q28	0.564	1
5p-Amp	Del_2q22.1	0.564	1
11q-Del	Amp_6p21.33	0.564	1
11q-Del	Amp_13q34	0.564	1
11q-Del	Amp_Xq28	0.564	1
19p-Del	Del_4q21.3	0.564	1
Amp_3q26.31	Del_1p13.2	0.564	1
Amp_3q26.31	Del_Xp11.3	0.564	1
Del_1p13.2	Del_4q21.3	0.564	1
Del_1p13.2	Del_16q11.2	0.564	1
Del_1p13.2	Del_16q23.1	0.564	1
Del_16q11.2	Del_Xp11.3	0.564	1
Del_16q23.1	Del_Xp11.3	0.564	1
STK11	Del_11p15.1	0.565	1
STK11	Del_11q25	0.565	1
Amp_19q13.13	Del_2q37.1	0.565	1
KRAS	Del_11q25	0.566	1
Amp_2q33.1	Del_11q25	0.566	1
ERBB2	HLA-A	0.568	1
ERBB2	PTEN	0.568	1
ERBB2	Del_22q13.32	0.568	1
FBXW7	Amp_20q11.21	0.568	1
10q-Del	Amp_20q11.21	0.568	1
13q-Del	Amp_20q11.21	0.568	1
18q-Del	Amp_20q11.21	0.568	1
Amp_15q26.1	Del_11q25	0.568	1
NFE2L2	Del_2q37.1	0.569	1
C12orf43	Del_8p23.3	0.569	1
RAB35	5p-Amp	0.569	1
RAB35	11q-Del	0.569	1
RAB35	Del_8p23.3	0.569	1
4p-Del	6q-Del	0.569	1
4p-Del	Amp_9p24.1	0.569	1
4p-Del	Amp_17q25.1	0.569	1
Del_1p36.23	Del_2q37.1	0.569	1
NHS	Del_11p15.1	0.571	1
Amp_17q12	Del_11p15.1	0.571	1
Del_1p36.23	Del_11p15.1	0.571	1
ARID1A	Amp_19q13.13	0.572	1
Del_10q23.31	Del_14q32.31	0.572	1
PIK3CA	Del_8p23.3	0.573	1
20p-Amp	3p-Del	0.573	1
20p-Amp	Del_6q26	0.573	1
ANKRD12	Amp_19q13.13	0.574	1
FBXW7	Amp_5p15.33	0.574	1
ZNF578	Amp_19q13.13	0.574	1
SMAD4	Amp_19q13.13	0.574	1
Amp_1q44	Del_14q32.31	0.574	1
Amp_5p15.33	Del_8p23.1	0.574	1
TRIM9	Del_4q22.1	0.575	1
Amp_3q28	Del_Xp11.3	0.575	1
Del_7q34	Del_20p12.1	0.575	1
CASP8	Amp_9p24.1	0.576	1
MAPK1	Amp_17q25.1	0.576	1
MAPK1	Del_17q25.3	0.576	1
PTPRC	8q-Amp	0.576	1
PTPRC	Amp_1p31.3	0.576	1
PTPRC	Amp_9p24.1	0.576	1
RB1	Del_17q25.3	0.576	1
TP53	8q-Amp	0.576	1
TP53	6q-Del	0.576	1
TP53	Amp_9p24.1	0.576	1
TP53	Amp_17q25.1	0.576	1
TP53	Del_17q25.3	0.576	1
8q-Amp	Del_19q13.33	0.576	1
22q-Del	Amp_9p24.1	0.576	1
5q-Del	Del_19q13.33	0.576	1
Amp_1p31.3	Del_19q13.33	0.576	1
Amp_17q25.1	Del_19q13.33	0.576	1
ARID1A	MED1	0.577	1
ARID1A	Amp_11q13.3	0.577	1
ERBB3	Amp_15q26.1	0.577	1
HLA-B	Amp_15q26.1	0.577	1
FAT2	Amp_7p11.2	0.577	1
FAT2	Del_14q32.31	0.577	1
MED1	Amp_7p11.2	0.577	1
Amp_2q33.1	Amp_7p11.2	0.577	1
RB1	3q-Amp	0.578	1
3q-Amp	Del_19q13.33	0.578	1
ERBB3	4p-Del	0.579	1
STK11	1q-Amp	0.579	1
TCTE1	1q-Amp	0.579	1
TCTE1	17p-Del	0.579	1
4p-Del	Amp_2q33.1	0.579	1
HLA-B	Amp_3q26.31	0.58	1
FAT2	Amp_3q26.31	0.58	1
Amp_2q33.1	Amp_3q26.31	0.58	1
CASP8	Del_17p12	0.581	1
Del_17p12	Del_19q13.33	0.581	1
SEMA4B	Del_7q34	0.582	1
5q-Del	Amp_1q21.3	0.582	1
Amp_1q21.3	Amp_9p24.1	0.582	1
8q-Amp	Del_4q21.3	0.583	1
8q-Amp	Del_16q11.2	0.583	1
17p-Del	Amp_3q28	0.583	1
Amp_9p24.1	Del_16q23.1	0.583	1
Amp_17q25.1	Del_16q23.1	0.583	1
Del_16q11.2	Del_17q25.3	0.583	1
22q-Del	Amp_3q28	0.585	1
FBXW7	3p-Del	0.587	1
FBXW7	Del_4q35.2	0.587	1
MUC4	Del_11q25	0.587	1
20q-Amp	13q-Del	0.587	1
FBXW7	Amp_2p24.3	0.588	1
FBXW7	Del_18q21.2	0.588	1
HLA-A	20p-Amp	0.588	1
20p-Amp	Amp_13q34	0.588	1
20p-Amp	Amp_Xq28	0.588	1
5p-Amp	Del_4q21.3	0.588	1
5p-Amp	Del_16q11.2	0.588	1
Amp_6p21.33	Del_5q12.1	0.588	1
Amp_13q22.1	Del_18q21.2	0.588	1
Amp_Xq28	Del_5q12.1	0.588	1
Del_5q12.1	Del_22q13.32	0.588	1
MUC4	Del_20p12.1	0.591	1
NFE2L2	1q-Amp	0.591	1
4p-Del	Del_8p23.3	0.591	1
ERBB2	Del_20p12.1	0.592	1
STK11	3p-Del	0.592	1
STK11	Del_4q35.2	0.592	1
STK11	Del_13q12.11	0.592	1
TCTE1	Del_4q35.2	0.592	1
Amp_3q26.31	Amp_6p21.33	0.593	1
Amp_3q26.31	Amp_13q34	0.593	1
Amp_3q26.31	Amp_Xq28	0.593	1
EP300	MTOR	0.594	1
EP300	TRIM9	0.594	1
HLA-B	Amp_3q28	0.594	1
FAT2	Amp_3q28	0.594	1
ZNF750	5p-Amp	0.594	1
ZNF750	11q-Del	0.594	1
ZNF750	Del_8p23.3	0.594	1
Amp_7p11.2	Amp_8q24.21	0.594	1
Amp_21q22.13	Del_18q21.2	0.594	1
PIK3CA	Amp_13q22.1	0.595	1
20p-Amp	Amp_8q24.21	0.596	1
CASP8	Amp_8q24.21	0.597	1
ERBB3	Del_13q14.2	0.597	1
HLA-B	Del_8p23.1	0.597	1
KRAS	Del_13q14.2	0.597	1
MED1	Del_13q14.2	0.597	1
Amp_2q33.1	Del_13q14.2	0.597	1
Amp_8q24.21	Del_19q13.33	0.597	1
CASP8	10q-Del	0.598	1
CASP8	Amp_13q22.1	0.598	1
CASP8	Amp_16p13.13	0.598	1
FBXW7	MAPK1	0.598	1
FBXW7	TP53	0.598	1
FBXW7	22q-Del	0.598	1
MAPK1	10q-Del	0.598	1
MAPK1	13q-Del	0.598	1
MAPK1	Amp_16p13.13	0.598	1
PTPRC	13q-Del	0.598	1
RB1	13q-Del	0.598	1
RB1	Amp_13q22.1	0.598	1
TP53	18q-Del	0.598	1
18q-Del	Del_19q13.33	0.598	1
22q-Del	Amp_16p13.13	0.598	1
Amp_16p13.13	Del_19q13.33	0.598	1
SEMA4B	Amp_11q22.1	0.599	1
8p-Del	Del_Xp11.3	0.599	1
Amp_3q26.31	Del_17q25.3	0.599	1
Del_1p13.2	Del_5q35.2	0.599	1
Del_5q35.2	Del_Xp11.3	0.599	1
MTOR	Del_2q37.1	0.601	1
TRIM9	Del_2q37.1	0.601	1
Amp_11q22.1	Del_20p12.1	0.601	1
C3orf70	Amp_1q44	0.602	1
BAP1	Del_17p12	0.602	1
C12orf43	Del_17p12	0.602	1
RAB35	Del_17p12	0.602	1
USP28	Amp_1q44	0.602	1
1q-Amp	Del_6p24.2	0.603	1
ERBB3	PTEN	0.604	1
ERBB3	Del_2q22.1	0.604	1
HLA-A	Amp_2q33.1	0.604	1
HLA-B	PTEN	0.604	1
HLA-B	Amp_Xq28	0.604	1
HLA-B	Del_2q22.1	0.604	1
HLA-B	Del_22q13.32	0.604	1
PTEN	FAT2	0.604	1
FAT2	Amp_13q34	0.604	1
FAT2	Del_2q22.1	0.604	1
MED1	Amp_6p21.33	0.604	1
MED1	Amp_Xq28	0.604	1
MED1	Del_2q22.1	0.604	1
Amp_2q33.1	Amp_13q34	0.604	1
Amp_2q33.1	Amp_Xq28	0.604	1
Amp_2q33.1	Del_2q22.1	0.604	1
Amp_2q33.1	Del_22q13.32	0.604	1
Amp_11q13.3	Amp_13q34	0.604	1
Amp_11q13.3	Amp_Xq28	0.604	1
Amp_11q13.3	Del_2q22.1	0.604	1
Amp_11q13.3	Del_22q13.32	0.604	1
ANKRD12	11p-Del	0.605	1
LIN9	11p-Del	0.605	1
4q-Del	Amp_3q26.31	0.605	1
Amp_3q26.31	Del_4q22.1	0.605	1
3p-Del	Amp_1q21.3	0.607	1
PTEN	Del_11q23.3	0.608	1
Amp_19q13.13	Del_4q35.2	0.609	1
Amp_19q13.13	Del_6q26	0.609	1
ARID1A	Amp_17q12	0.61	1
NFE2L2	Amp_7p11.2	0.61	1
PTEN	Amp_3q28	0.61	1
NHS	Amp_7p11.2	0.61	1
NHS	Del_14q32.31	0.61	1
20p-Amp	Del_5q12.1	0.61	1
Amp_3q28	Amp_6p21.33	0.61	1
Amp_3q28	Del_2q22.1	0.61	1
Amp_3q28	Del_22q13.32	0.61	1
Amp_7p11.2	Amp_17q12	0.61	1
Amp_7p11.2	Del_1p36.23	0.61	1
Amp_9p24.1	Del_7q34	0.61	1
Amp_17q12	Del_14q32.31	0.61	1
NFE2L2	Del_6q26	0.611	1
NFE2L2	Del_13q12.11	0.611	1
NHS	3p-Del	0.611	1
NHS	Del_4q35.2	0.611	1
20q-Amp	Del_1p36.23	0.611	1
3q-Amp	Del_3p14.2	0.611	1
Amp_17q12	Del_4q35.2	0.611	1
Del_1p36.23	Del_13q12.11	0.611	1
MAPK1	Amp_20q11.21	0.612	1
Amp_19q13.13	Del_17p12	0.612	1
Amp_20q11.21	Del_19q13.33	0.612	1
HLA-A	Amp_19q13.13	0.613	1
C12orf43	Amp_8q24.21	0.613	1
SMAD4	3q-Amp	0.613	1
TRIM9	Del_4q21.3	0.613	1
TRIM9	Del_16q11.2	0.613	1
1p-Amp	Del_8p23.3	0.613	1
5p-Amp	Del_20p12.1	0.613	1
Amp_5p15.33	Del_1p13.2	0.613	1
Amp_7p11.2	Amp_20q11.21	0.613	1
Amp_15q26.1	Amp_20q11.21	0.613	1
Amp_19q13.13	Del_22q13.32	0.613	1
Amp_21q22.13	Del_16q11.2	0.613	1
Amp_Xq28	Del_10q23.31	0.613	1
Del_2q22.1	Del_10q23.31	0.613	1
ERBB2	6q-Del	0.616	1
ERBB2	Amp_1p31.3	0.616	1
ERBB2	Amp_17q25.1	0.616	1
SEMA4B	20p-Amp	0.616	1
SEMA4B	Del_5q12.1	0.616	1
ZNF750	Amp_17q25.1	0.616	1
20p-Amp	Del_1p13.2	0.616	1
10q-Del	Del_16q11.2	0.616	1
13q-Del	Del_16q11.2	0.616	1
18q-Del	Del_4q21.3	0.616	1
19p-Del	Del_5q12.1	0.616	1
Amp_2p24.3	Del_11p15.1	0.616	1
Amp_13q22.1	Del_16q11.2	0.616	1
Amp_13q22.1	Del_16q23.1	0.616	1
Amp_16p13.13	Del_16q23.1	0.616	1
Del_1p13.2	Del_5q12.1	0.616	1
Del_5q12.1	Del_Xp11.3	0.616	1
ERBB3	Del_3p14.2	0.617	1
HLA-B	Amp_5p15.33	0.617	1
STK11	Del_13q14.2	0.617	1
MED1	Del_3p14.2	0.617	1
TCTE1	Del_8p23.1	0.617	1
3q-Del	Amp_5p15.33	0.617	1
Amp_2q33.1	Amp_5p15.33	0.617	1
Del_1p36.23	Del_11q23.3	0.617	1
11p-Del	Del_14q32.31	0.618	1
CASP8	Del_4q22.1	0.619	1
CASP8	Del_6p24.2	0.619	1
MAPK1	Del_6p24.2	0.619	1
PTPRC	Del_4q22.1	0.619	1
TP53	4q-Del	0.619	1
TP53	Del_6p24.2	0.619	1
22q-Del	Del_4q22.1	0.619	1
22q-Del	Del_6p24.2	0.619	1
Del_6p24.2	Del_18q21.2	0.619	1
Amp_5p15.33	Del_11q23.3	0.622	1
HLA-A	Amp_5p15.33	0.624	1
Amp_5p15.33	Del_2q22.1	0.624	1
Amp_6p21.33	Del_3p14.2	0.624	1
HLA-A	Del_17p12	0.626	1
PTEN	Amp_1q44	0.626	1
PTEN	Del_17p12	0.626	1
1q-Amp	Del_8p23.1	0.626	1
20p-Amp	Del_15q21.1	0.626	1
5p-Amp	Del_13q14.2	0.626	1
Amp_1q44	Del_2q22.1	0.626	1
Del_2q22.1	Del_17p12	0.626	1
ERBB3	Del_20p12.1	0.628	1
HLA-B	1p-Amp	0.628	1
KRAS	Del_15q21.1	0.628	1
FAT2	Del_20p12.1	0.628	1
MED1	1p-Amp	0.628	1
MED1	Del_15q21.1	0.628	1
1p-Amp	Amp_2q33.1	0.628	1
4p-Del	Del_6q26	0.628	1
Amp_2q33.1	Del_20p12.1	0.628	1
Amp_11q13.3	Del_15q21.1	0.628	1
20p-Amp	Del_8p23.1	0.629	1
NFE2L2	4p-Del	0.63	1
NHS	4p-Del	0.63	1
MTOR	Del_7q34	0.632	1
PIK3CA	Amp_2q33.1	0.632	1
TP53	Del_11q23.3	0.632	1
SEMA4B	Amp_19q13.13	0.632	1
SEMA4B	Del_10q23.31	0.632	1
TRIM9	Del_7q34	0.632	1
22q-Del	Del_11q23.3	0.632	1
Amp_19q13.13	Del_Xp11.3	0.632	1
Del_1p13.2	Del_10q23.31	0.632	1
ANKRD12	Del_11p15.1	0.633	1
LIN9	Del_11p15.1	0.633	1
11p-Del	Del_7q34	0.633	1
13q-Del	Amp_1q21.3	0.633	1
FBXW7	Del_8p23.1	0.635	1
13q-Del	Del_8p23.1	0.635	1
18q-Del	Del_13q14.2	0.635	1
Amp_13q22.1	Del_8p23.1	0.635	1
1q-Amp	Del_11q25	0.636	1
20p-Amp	Del_11q25	0.636	1
8q-Amp	8p-Del	0.636	1
8q-Amp	Amp_11q22.1	0.636	1
8q-Amp	Del_5q35.2	0.636	1
6q-Del	Del_5q35.2	0.636	1
8p-Del	Amp_1p31.3	0.636	1
8p-Del	Amp_17q25.1	0.636	1
Amp_1p31.3	Amp_11q22.1	0.636	1
Amp_9p24.1	Amp_11q22.1	0.636	1
Amp_11q22.1	Amp_17q25.1	0.636	1
Amp_11q22.1	Del_17q25.3	0.636	1
MUC4	5q-Del	0.637	1
NFE2L2	Del_2q22.1	0.637	1
PTEN	NHS	0.637	1
PTEN	Del_1p36.23	0.637	1
NHS	Amp_6p21.33	0.637	1
NHS	Del_2q22.1	0.637	1
NHS	Del_22q13.32	0.637	1
Amp_3q28	Del_5q35.2	0.637	1
Amp_13q34	Amp_17q12	0.637	1
Del_1p36.23	Del_22q13.32	0.637	1
ERBB2	FBXW7	0.638	1
ERBB2	18q-Del	0.638	1
ERBB2	Amp_13q22.1	0.638	1
FBXW7	ZNF750	0.638	1
ZNF750	13q-Del	0.638	1
ZNF750	Amp_16p13.13	0.638	1
8p-Del	Amp_5p15.33	0.638	1
Amp_3q26.31	Del_13q12.11	0.638	1
Amp_11q22.1	Del_3p14.2	0.638	1
EP300	MAPK1	0.639	1
MAPK1	Amp_2p24.3	0.639	1
PTPRC	Amp_2p24.3	0.639	1
TP53	Del_18q21.2	0.639	1
22q-Del	Amp_2p24.3	0.639	1
20p-Amp	Del_10q23.31	0.64	1
Amp_2p24.3	Amp_8q24.21	0.64	1
Amp_8q24.21	Del_18q21.2	0.64	1
PIK3CA	Amp_13q34	0.641	1
PIK3CA	Del_22q13.32	0.641	1
ERBB2	Amp_1q44	0.643	1
18q-Del	Del_7q34	0.644	1
3p-Del	Amp_1q44	0.646	1
Amp_8q24.21	Amp_Xq28	0.646	1
Amp_8q24.21	Del_2q22.1	0.646	1
ANKRD12	1q-Amp	0.647	1
ANKRD12	17p-Del	0.647	1
ZNF578	17p-Del	0.647	1
IDS	17p-Del	0.647	1
SMAD4	1q-Amp	0.647	1
1q-Amp	Amp_11p12	0.647	1
4p-Del	Amp_1q21.3	0.647	1
Del_1p36.23	Del_11q25	0.647	1
NHS	Del_13q14.2	0.648	1
4q-Del	Del_16q11.2	0.648	1
4q-Del	Del_16q23.1	0.648	1
MTOR	8p-Del	0.649	1
MTOR	Del_5q35.2	0.649	1
8p-Del	Amp_21q22.13	0.649	1
ERBB3	11q-Del	0.65	1
ERBB3	Del_8p23.3	0.65	1
HLA-B	Del_8p23.3	0.65	1
KRAS	5p-Amp	0.65	1
KRAS	11q-Del	0.65	1
MED1	5p-Amp	0.65	1
5p-Amp	Amp_11q13.3	0.65	1
Amp_19q13.13	Del_20p12.1	0.65	1
C3orf70	Amp_1q21.3	0.652	1
ERBB3	5q-Del	0.652	1
ERBB3	6q-Del	0.652	1
ERBB3	Amp_17q25.1	0.652	1
ERBB3	Del_17q25.3	0.652	1
HLA-B	5q-Del	0.652	1
HLA-B	Amp_1p31.3	0.652	1
HLA-B	Amp_9p24.1	0.652	1
KRAS	6q-Del	0.652	1
FAT2	8q-Amp	0.652	1
FAT2	6q-Del	0.652	1
FAT2	Amp_17q25.1	0.652	1
MED1	8q-Amp	0.652	1
MED1	5q-Del	0.652	1
MED1	Amp_1p31.3	0.652	1
MED1	Amp_17q25.1	0.652	1
MED1	Del_17q25.3	0.652	1
TCTE1	Del_8p23.3	0.652	1
USP28	Amp_1q21.3	0.652	1
4p-Del	Del_6p24.2	0.652	1
6q-Del	Amp_11q13.3	0.652	1
Amp_2q33.1	Del_17q25.3	0.652	1
Amp_11q13.3	Amp_17q25.1	0.652	1
Amp_11q13.3	Del_17q25.3	0.652	1
3p-Del	Amp_5p15.33	0.653	1
CASP8	Amp_1q21.3	0.656	1
MAPK1	Amp_1q21.3	0.656	1
TP53	Amp_1q21.3	0.656	1
Amp_1q21.3	Del_19q13.33	0.656	1
22q-Del	Del_11q25	0.657	1
Amp_3q26.31	Del_17p12	0.657	1
CASP8	Del_4q21.3	0.658	1
CASP8	Del_16q23.1	0.658	1
MAPK1	Del_4q21.3	0.658	1
MAPK1	Del_16q23.1	0.658	1
PTPRC	Del_4q21.3	0.658	1
RB1	Del_16q11.2	0.658	1
RB1	Del_16q23.1	0.658	1
TP53	Del_4q21.3	0.658	1
5p-Amp	Amp_9p24.1	0.658	1
11p-Del	Amp_Xq28	0.658	1
11p-Del	Del_22q13.32	0.658	1
11q-Del	6q-Del	0.658	1
22q-Del	Del_4q21.3	0.658	1
Amp_17q25.1	Del_8p23.3	0.658	1
Del_16q11.2	Del_19q13.33	0.658	1
ERBB2	Del_6p24.2	0.659	1
ZNF750	Del_6p24.2	0.659	1
20q-Amp	Del_13q14.2	0.659	1
3p-Del	Del_8p23.1	0.659	1
ANKRD12	3p-Del	0.66	1
ANKRD12	Del_13q12.11	0.66	1
ERBB2	3q-Amp	0.66	1
ZNF578	20q-Amp	0.66	1
ZNF578	3p-Del	0.66	1
ZNF578	Del_6q26	0.66	1
IDS	20q-Amp	0.66	1
IDS	Del_4q35.2	0.66	1
IDS	Del_13q12.11	0.66	1
SMAD4	20q-Amp	0.66	1
SMAD4	Del_6q26	0.66	1
SMAD4	Del_13q12.11	0.66	1
20q-Amp	Amp_11p12	0.66	1
Amp_11p12	Del_6q26	0.66	1
NFE2L2	1p-Amp	0.661	1
NFE2L2	Del_15q21.1	0.661	1
1p-Amp	Amp_17q12	0.661	1
20p-Amp	6q-Del	0.661	1
8q-Amp	Del_5q12.1	0.661	1
Amp_17q12	Del_15q21.1	0.661	1
Del_1p36.23	Del_15q21.1	0.661	1
Del_1p36.23	Del_20p12.1	0.661	1
C3orf70	Del_2q37.1	0.662	1
BAP1	Del_2q37.1	0.662	1
RAB35	Del_2q37.1	0.662	1
11p-Del	19p-Del	0.662	1
Amp_3q28	Del_13q12.11	0.662	1
Amp_20q11.21	Del_18q21.2	0.662	1
3q-Amp	11p-Del	0.663	1
HLA-A	Amp_20q11.21	0.664	1
Amp_6p21.33	Amp_20q11.21	0.664	1
Amp_20q11.21	Del_2q22.1	0.664	1
EP300	20q-Amp	0.666	1
EP300	Del_6q26	0.666	1
MTOR	Del_5q12.1	0.666	1
TRIM9	20p-Amp	0.666	1
Amp_2p24.3	Del_13q12.11	0.666	1
Amp_1q21.3	Del_14q32.31	0.667	1
3q-Amp	8q-Amp	0.668	1
3q-Amp	6q-Del	0.668	1
Amp_7p11.2	Del_14q32.31	0.669	1
CASP8	Del_2q37.1	0.67	1
FBXW7	8p-Del	0.67	1
PTPRC	Del_2q37.1	0.67	1
10q-Del	8p-Del	0.67	1
13q-Del	8p-Del	0.67	1
22q-Del	Del_2q37.1	0.67	1
8p-Del	Amp_13q22.1	0.67	1
8p-Del	Amp_16p13.13	0.67	1
Amp_11q22.1	Amp_16p13.13	0.67	1
Amp_19q13.13	Del_10q23.31	0.67	1
IDS	4p-Del	0.673	1
LIN9	4p-Del	0.673	1
11q-Del	Amp_8q24.21	0.673	1
4p-Del	Amp_11p12	0.673	1
ERBB3	10q-Del	0.674	1
ERBB3	13q-Del	0.674	1
ERBB3	Amp_16p13.13	0.674	1
FBXW7	FAT2	0.674	1
HLA-B	13q-Del	0.674	1
HLA-B	18q-Del	0.674	1
KRAS	13q-Del	0.674	1
FAT2	10q-Del	0.674	1
FAT2	18q-Del	0.674	1
FAT2	Amp_13q22.1	0.674	1
FAT2	Amp_16p13.13	0.674	1
10q-Del	Amp_11q13.3	0.674	1
Amp_2q33.1	Amp_13q22.1	0.674	1
Amp_2q33.1	Amp_16p13.13	0.674	1
Amp_11q13.3	Amp_13q22.1	0.674	1
Amp_11q13.3	Amp_16p13.13	0.674	1
Del_6p24.2	Del_8p23.1	0.675	1
CASP8	Del_7q34	0.676	1
MAPK1	Del_7q34	0.676	1
PTPRC	Del_7q34	0.676	1
RB1	Del_7q34	0.676	1
Amp_11p12	Del_11q25	0.676	1
20q-Amp	11p-Del	0.677	1
17p-Del	Del_16q11.2	0.677	1
EP300	Del_4q21.3	0.678	1
Del_4q21.3	Del_18q21.2	0.678	1
MUC4	18q-Del	0.679	1
MUC4	Amp_16p13.13	0.679	1
1q-Amp	Amp_7p11.2	0.68	1
17p-Del	Amp_7p11.2	0.68	1
4q-Del	Amp_1q21.3	0.68	1
Amp_1q21.3	Del_4q22.1	0.68	1
MUC4	20p-Amp	0.681	1
4p-Del	Amp_1q44	0.681	1
Amp_5p15.33	Del_15q21.1	0.681	1
Amp_5p15.33	Del_20p12.1	0.681	1
MTOR	Del_10q23.31	0.682	1
MUC4	Amp_17q12	0.683	1
MUC4	Del_1p36.23	0.683	1
Del_1p36.23	Del_3p14.2	0.683	1
Amp_1q21.3	Del_8p23.1	0.684	1
ANKRD12	Del_13q14.2	0.685	1
NFE2L2	8q-Amp	0.685	1
NFE2L2	6q-Del	0.685	1
NFE2L2	Amp_1p31.3	0.685	1
NFE2L2	Amp_17q25.1	0.685	1
ZNF578	Del_8p23.1	0.685	1
LIN9	Del_8p23.1	0.685	1
NHS	8q-Amp	0.685	1
NHS	Amp_17q25.1	0.685	1
TCTE1	Amp_1q44	0.685	1
TCTE1	Del_17p12	0.685	1
8q-Amp	Amp_17q12	0.685	1
8q-Amp	Del_1p36.23	0.685	1
6q-Del	Amp_17q12	0.685	1
Amp_11p12	Del_8p23.1	0.685	1
Amp_11p12	Del_13q14.2	0.685	1
Del_1p36.23	Del_17q25.3	0.685	1
20p-Amp	Del_3p14.2	0.686	1
4p-Del	Amp_2p24.3	0.689	1
Amp_5p15.33	Del_11q25	0.69	1
TRIM9	Del_3p14.2	0.691	1
19p-Del	Del_11p15.1	0.691	1
Del_11p15.1	Del_Xp11.3	0.691	1
CASP8	8p-Del	0.693	1
RB1	Del_5q35.2	0.693	1
22q-Del	8p-Del	0.693	1
8p-Del	Del_19q13.33	0.693	1
Amp_3q26.31	Del_14q32.31	0.693	1
Amp_8q24.21	Del_20p12.1	0.693	1
Del_5q35.2	Del_19q13.33	0.693	1
ERBB3	4q-Del	0.694	1
ERBB3	Del_6p24.2	0.694	1
FBXW7	20p-Amp	0.694	1
HLA-B	Del_4q22.1	0.694	1
KRAS	4q-Del	0.694	1
KRAS	Del_6p24.2	0.694	1
FAT2	4q-Del	0.694	1
FAT2	Del_6p24.2	0.694	1
MED1	Del_6p24.2	0.694	1
20p-Amp	Amp_13q22.1	0.694	1
4q-Del	Amp_11q13.3	0.694	1
Amp_2q33.1	Del_6p24.2	0.694	1
Amp_3q26.31	Del_1p36.23	0.694	1
Amp_11q13.3	Del_4q22.1	0.694	1
Amp_11q13.3	Del_6p24.2	0.694	1
ARID1A	Amp_13q34	0.695	1
ARID1A	Del_22q13.32	0.695	1
3q-Amp	Del_14q32.31	0.695	1
Amp_13q34	Del_14q32.31	0.695	1
Amp_15q26.1	Amp_Xq28	0.695	1
Amp_15q26.1	Del_2q22.1	0.695	1
Del_14q32.31	Del_22q13.32	0.695	1
ERBB2	Amp_3q26.31	0.696	1
ERBB2	Del_4q21.3	0.697	1
ERBB2	Del_16q23.1	0.697	1
ZNF750	Del_16q23.1	0.697	1
20p-Amp	11p-Del	0.697	1
Amp_3q26.31	Del_7q34	0.697	1
ERBB3	Del_17p12	0.698	1
HLA-B	Del_17p12	0.698	1
KRAS	Amp_1q44	0.698	1
PIK3CA	Del_20p12.1	0.698	1
FAT2	Amp_1q44	0.698	1
Amp_11q13.3	Del_17p12	0.698	1
FBXW7	Del_8p23.3	0.7	1
NFE2L2	5p-Amp	0.7	1
20q-Amp	Amp_7p11.2	0.7	1
20q-Amp	Amp_15q26.1	0.7	1
20q-Amp	Del_14q32.31	0.7	1
5p-Amp	10q-Del	0.7	1
5p-Amp	Del_1p36.23	0.7	1
11q-Del	Amp_16p13.13	0.7	1
11q-Del	Amp_17q12	0.7	1
11q-Del	Del_1p36.23	0.7	1
13q-Del	Del_8p23.3	0.7	1
4q-Del	Amp_11q22.1	0.7	1
Amp_5p15.33	Del_8p23.3	0.7	1
Amp_7p11.2	Del_6q26	0.7	1
Amp_11q22.1	Del_4q22.1	0.7	1
Amp_13q22.1	Del_8p23.3	0.7	1
Amp_15q26.1	Del_6q26	0.7	1
Amp_15q26.1	Del_13q12.11	0.7	1
Del_5q35.2	Del_6p24.2	0.7	1
Del_6q26	Del_14q32.31	0.7	1
Del_11p15.1	Del_22q13.32	0.7	1
Del_13q12.11	Del_14q32.31	0.7	1
20q-Amp	Del_16q23.1	0.701	1
3q-Amp	Del_4q21.3	0.701	1
Amp_20q11.21	Del_6q26	0.701	1
Del_4q35.2	Del_16q11.2	0.701	1
Del_4q35.2	Del_16q23.1	0.701	1
Del_13q12.11	Del_16q11.2	0.701	1
MTOR	Amp_3q26.31	0.702	1
PIK3CA	Del_18q21.2	0.702	1
PIK3CA	TRIM9	0.703	1
EP300	Del_7q34	0.704	1
1q-Amp	Del_1p13.2	0.704	1
1q-Amp	Del_Xp11.3	0.704	1
3q-Amp	Del_1p13.2	0.704	1
3q-Amp	Del_Xp11.3	0.704	1
17p-Del	Del_1p13.2	0.704	1
Amp_20q11.21	Del_16q23.1	0.704	1
Del_7q34	Del_18q21.2	0.704	1
20p-Amp	11q-Del	0.705	1
20p-Amp	Del_8p23.3	0.705	1
FBXW7	NHS	0.706	1
NFE2L2	10q-Del	0.706	1
NHS	10q-Del	0.706	1
NHS	13q-Del	0.706	1
NHS	18q-Del	0.706	1
NHS	Amp_16p13.13	0.706	1
Amp_8q24.21	Del_3p14.2	0.706	1
Amp_13q22.1	Amp_17q12	0.706	1
17p-Del	Amp_3q26.31	0.707	1
Amp_3q28	Del_1p36.23	0.707	1
Amp_3q28	Del_14q32.31	0.707	1
ERBB2	Amp_3q28	0.708	1
MUC4	LIN9	0.708	1
MUC4	SMAD4	0.708	1
MUC4	Amp_11p12	0.708	1
3q-Del	Del_11q23.3	0.708	1
CASP8	20p-Amp	0.71	1
MAPK1	20p-Amp	0.71	1
PTPRC	Del_5q12.1	0.71	1
RB1	Del_5q12.1	0.71	1
20p-Amp	Del_19q13.33	0.71	1
Del_5q12.1	Del_19q13.33	0.71	1
EP300	Del_8p23.1	0.711	1
Del_13q14.2	Del_18q21.2	0.711	1
MTOR	Amp_3q28	0.712	1
ZNF578	Amp_3q26.31	0.712	1
IDS	Amp_3q26.31	0.712	1
1q-Amp	11q-Del	0.712	1
1q-Amp	Del_8p23.3	0.712	1
Amp_1q21.3	Del_3p14.2	0.712	1
Amp_3q28	Amp_21q22.13	0.712	1
HLA-B	Amp_8q24.21	0.713	1
EP300	ERBB3	0.714	1
EP300	KRAS	0.714	1
EP300	MED1	0.714	1
HLA-B	Amp_2p24.3	0.714	1
HLA-B	Del_18q21.2	0.714	1
FAT2	Amp_2p24.3	0.714	1
FAT2	Del_18q21.2	0.714	1
MED1	Amp_2p24.3	0.714	1
Amp_2p24.3	Amp_11q13.3	0.714	1
ERBB2	Amp_1q21.3	0.716	1
MUC4	3p-Del	0.717	1
MUC4	Del_4q35.2	0.717	1
MUC4	Del_6p24.2	0.717	1
MUC4	Del_13q12.11	0.717	1
SEMA4B	20q-Amp	0.717	1
SEMA4B	3p-Del	0.717	1
SEMA4B	Del_13q12.11	0.717	1
20q-Amp	Del_1p13.2	0.717	1
10q-Del	Amp_19q13.13	0.717	1
13q-Del	Amp_19q13.13	0.717	1
19p-Del	Del_6q26	0.717	1
3p-Del	Del_Xp11.3	0.717	1
Amp_1q21.3	Del_2q22.1	0.717	1
Amp_9p24.1	Del_17p12	0.717	1
Amp_16p13.13	Amp_19q13.13	0.717	1
Amp_16p13.13	Del_10q23.31	0.717	1
Amp_17q25.1	Del_17p12	0.717	1
4p-Del	Amp_15q26.1	0.718	1
Amp_3q28	Del_5q12.1	0.718	1
ARID1A	1p-Amp	0.719	1
ARID1A	Del_15q21.1	0.719	1
HLA-A	17p-Del	0.719	1
1q-Amp	Del_2q22.1	0.719	1
17p-Del	Amp_6p21.33	0.719	1
Amp_7p11.2	Del_15q21.1	0.719	1
ZNF578	Del_8p23.3	0.72	1
IDS	5p-Amp	0.72	1
IDS	11q-Del	0.72	1
LIN9	Del_8p23.3	0.72	1
SMAD4	5p-Amp	0.72	1
5p-Amp	Amp_11p12	0.72	1
11q-Del	Amp_11p12	0.72	1
Amp_11p12	Del_8p23.3	0.72	1
HLA-A	Amp_6p21.33	0.721	1
HLA-A	Amp_13q34	0.721	1
HLA-A	Del_2q22.1	0.721	1
HLA-A	Del_22q13.32	0.721	1
PTEN	Amp_6p21.33	0.721	1
ZNF578	Amp_3q28	0.721	1
IDS	Amp_3q28	0.721	1
Amp_6p21.33	Del_22q13.32	0.721	1
Amp_13q34	Amp_Xq28	0.721	1
Amp_13q34	Del_2q22.1	0.721	1
Amp_13q34	Del_22q13.32	0.721	1
3q-Del	Del_11q25	0.722	1
C12orf43	Amp_5p15.33	0.723	1
RAB35	Amp_5p15.33	0.723	1
Amp_1q21.3	Del_18q21.2	0.724	1
CASP8	Del_10q23.31	0.725	1
MAPK1	Del_10q23.31	0.725	1
PTPRC	Amp_19q13.13	0.725	1
RB1	Amp_19q13.13	0.725	1
3q-Amp	10q-Del	0.725	1
KRAS	Amp_20q11.21	0.727	1
PIK3CA	11q-Del	0.727	1
MED1	Amp_20q11.21	0.727	1
NHS	Del_4q22.1	0.727	1
5p-Amp	Del_11q23.3	0.727	1
Amp_17q12	Del_4q22.1	0.727	1
EP300	Amp_11q22.1	0.729	1
SEMA4B	4p-Del	0.729	1
3q-Amp	Del_10q23.31	0.729	1
8q-Amp	11p-Del	0.729	1
4p-Del	Del_1p13.2	0.729	1
4p-Del	Del_Xp11.3	0.729	1
8p-Del	Amp_2p24.3	0.729	1
ERBB3	3q-Amp	0.73	1
KRAS	3q-Amp	0.73	1
Amp_5p15.33	Del_16q11.2	0.73	1
C3orf70	PIK3CA	0.731	1
PIK3CA	BAP1	0.731	1
PIK3CA	C12orf43	0.731	1
Del_7q34	Del_16q23.1	0.731	1
ERBB2	Del_5q35.2	0.732	1
HLA-B	Del_16q11.2	0.732	1
HLA-B	Del_16q23.1	0.732	1
KRAS	Del_16q11.2	0.732	1
C12orf43	Amp_3q26.31	0.732	1
FAT2	Del_4q21.3	0.732	1
USP28	Amp_3q26.31	0.732	1
ZNF750	8p-Del	0.732	1
ZNF750	Del_5q35.2	0.732	1
8q-Amp	Del_3p14.2	0.732	1
6q-Del	Amp_5p15.33	0.732	1
Amp_5p15.33	Amp_9p24.1	0.732	1
Amp_11q13.3	Del_16q23.1	0.732	1
Del_2q37.1	Del_22q13.32	0.733	1
PIK3CA	Amp_8q24.21	0.734	1
5q-Del	Amp_8q24.21	0.735	1
6q-Del	Amp_8q24.21	0.735	1
Amp_1p31.3	Del_11q23.3	0.735	1
Amp_8q24.21	Amp_17q25.1	0.735	1
Amp_15q26.1	Del_13q14.2	0.735	1
Del_8p23.1	Del_14q32.31	0.735	1
11p-Del	Amp_20q11.21	0.737	1
8p-Del	Amp_1q44	0.737	1
Amp_1q44	Del_17p12	0.737	1
Del_6p24.2	Del_8p23.3	0.737	1
HLA-A	20q-Amp	0.738	1
HLA-A	3p-Del	0.738	1
HLA-A	Del_13q12.11	0.738	1
PTEN	Del_6q26	0.738	1
20q-Amp	Amp_13q34	0.738	1
3p-Del	Amp_6p21.33	0.738	1
Amp_6p21.33	Del_6q26	0.738	1
Amp_13q34	Del_4q35.2	0.738	1
Amp_13q34	Del_6q26	0.738	1
Amp_Xq28	Del_13q12.11	0.738	1
Del_2q22.1	Del_4q35.2	0.738	1
Del_6q26	Del_22q13.32	0.738	1
Del_8p23.3	Del_10q23.31	0.738	1
C12orf43	Amp_3q28	0.739	1
USP28	Amp_3q28	0.739	1
1q-Amp	Del_11q23.3	0.74	1
1q-Amp	8p-Del	0.741	1
19p-Del	Del_13q14.2	0.741	1
ARID1A	Amp_1p31.3	0.742	1
ARID1A	Amp_9p24.1	0.742	1
8q-Amp	Amp_7p11.2	0.742	1
8q-Amp	Amp_15q26.1	0.742	1
17p-Del	Amp_1q21.3	0.742	1
5q-Del	Amp_15q26.1	0.742	1
6q-Del	Amp_15q26.1	0.742	1
6q-Del	Del_14q32.31	0.742	1
Amp_7p11.2	Del_17q25.3	0.742	1
Amp_15q26.1	Del_17q25.3	0.742	1
Amp_17q25.1	Del_14q32.31	0.742	1
STK11	Del_2q37.1	0.743	1
11q-Del	Del_6q26	0.743	1
3p-Del	Del_8p23.3	0.743	1
HLA-A	Del_15q21.1	0.745	1
PTEN	Del_15q21.1	0.745	1
Amp_13q34	Del_15q21.1	0.745	1
Del_1p13.2	Del_11q23.3	0.745	1
Del_2q22.1	Del_15q21.1	0.745	1
Del_2q22.1	Del_20p12.1	0.745	1
Del_11q23.3	Del_Xp11.3	0.745	1
EP300	NHS	0.746	1
EP300	Amp_17q12	0.746	1
NFE2L2	Del_17p12	0.746	1
NHS	Amp_2p24.3	0.746	1
NHS	Del_18q21.2	0.746	1
Amp_2p24.3	Del_1p36.23	0.746	1
Amp_19q13.13	Del_6p24.2	0.747	1
ERBB2	20p-Amp	0.748	1
ERBB2	Del_5q12.1	0.748	1
PIK3CA	Amp_1p31.3	0.748	1
ERBB3	Del_7q34	0.75	1
Amp_2q33.1	Del_7q34	0.75	1
Amp_11q13.3	Del_7q34	0.75	1
ANKRD12	Amp_1q44	0.751	1
ANKRD12	Del_17p12	0.751	1
ZNF578	Del_17p12	0.751	1
SMAD4	Amp_1q44	0.751	1
EP300	20p-Amp	0.752	1
MTOR	1q-Amp	0.752	1
MUC4	Amp_2p24.3	0.752	1
MUC4	Del_18q21.2	0.752	1
TRIM9	1q-Amp	0.752	1
TRIM9	17p-Del	0.752	1
HLA-A	3q-Amp	0.753	1
PIK3CA	Del_11p15.1	0.753	1
3q-Amp	Amp_6p21.33	0.753	1
5q-Del	Amp_20q11.21	0.753	1
Amp_20q11.21	Del_17q25.3	0.753	1
11p-Del	22q-Del	0.754	1
PTEN	4p-Del	0.755	1
4p-Del	Del_22q13.32	0.755	1
Amp_11q22.1	Del_4q21.3	0.755	1
CASP8	Del_3p14.2	0.757	1
PIK3CA	Del_13q14.2	0.757	1
PTPRC	Amp_5p15.33	0.757	1
PTPRC	Del_3p14.2	0.757	1
RB1	Amp_5p15.33	0.757	1
RB1	Del_3p14.2	0.757	1
TP53	Amp_5p15.33	0.757	1
TP53	Del_3p14.2	0.757	1
Del_3p14.2	Del_19q13.33	0.757	1
FBXW7	11p-Del	0.759	1
20p-Amp	Del_11q23.3	0.759	1
11p-Del	Amp_16p13.13	0.759	1
NFE2L2	Amp_8q24.21	0.76	1
IDS	Amp_8q24.21	0.761	1
SMAD4	Amp_8q24.21	0.761	1
Amp_1q21.3	Del_15q21.1	0.761	1
Amp_1q21.3	Del_4q21.3	0.762	1
ARID1A	Amp_13q22.1	0.763	1
FBXW7	Amp_7p11.2	0.763	1
FBXW7	Del_14q32.31	0.763	1
ZNF750	Amp_19q13.13	0.763	1
1q-Amp	3p-Del	0.763	1
1q-Amp	Del_13q12.11	0.763	1
10q-Del	Del_14q32.31	0.763	1
8p-Del	Del_4q35.2	0.763	1
8p-Del	Del_13q12.11	0.763	1
Amp_7p11.2	Amp_16p13.13	0.763	1
Amp_11q22.1	Del_13q12.11	0.763	1
Amp_13q22.1	Amp_15q26.1	0.763	1
Amp_13q22.1	Del_14q32.31	0.763	1
Amp_16p13.13	Del_14q32.31	0.763	1
MTOR	20q-Amp	0.764	1
MTOR	3p-Del	0.764	1
MTOR	Del_4q35.2	0.764	1
MUC4	19p-Del	0.764	1
MUC4	Del_1p13.2	0.764	1
NHS	Del_4q21.3	0.764	1
TRIM9	20q-Amp	0.764	1
TRIM9	Del_6q26	0.764	1
1q-Amp	Del_2q37.1	0.764	1
3p-Del	Amp_21q22.13	0.764	1
Amp_17q12	Del_4q21.3	0.764	1
Amp_17q12	Del_16q11.2	0.764	1
Amp_17q12	Del_16q23.1	0.764	1
Del_1p13.2	Del_11q25	0.764	1
Amp_1p31.3	Del_11q25	0.765	1
Amp_20q11.21	Del_13q14.2	0.765	1
ERBB3	8p-Del	0.766	1
ERBB3	Amp_11q22.1	0.766	1
FAT2	Amp_11q22.1	0.766	1
FAT2	Del_5q35.2	0.766	1
HLA-A	5q-Del	0.767	1
PTEN	5q-Del	0.767	1
PTEN	6q-Del	0.767	1
PTEN	Amp_1p31.3	0.767	1
PTEN	Amp_9p24.1	0.767	1
PTEN	Amp_17q25.1	0.767	1
8q-Amp	Del_22q13.32	0.767	1
5q-Del	Amp_13q34	0.767	1
5q-Del	Amp_Xq28	0.767	1
5q-Del	Del_22q13.32	0.767	1
6q-Del	Amp_13q34	0.767	1
6q-Del	Amp_Xq28	0.767	1
6q-Del	Del_22q13.32	0.767	1
Amp_1p31.3	Amp_Xq28	0.767	1
Amp_9p24.1	Del_2q22.1	0.767	1
Amp_17q25.1	Del_22q13.32	0.767	1
Amp_Xq28	Del_17q25.3	0.767	1
KRAS	Amp_1q21.3	0.768	1
MAPK1	PIK3CA	0.768	1
PIK3CA	22q-Del	0.768	1
PIK3CA	Del_19q13.33	0.768	1
FAT2	Amp_1q21.3	0.768	1
1p-Amp	Del_15q21.1	0.768	1
1q-Amp	Del_3p14.2	0.768	1
Amp_1p31.3	Del_11p15.1	0.768	1
1q-Amp	Del_5q12.1	0.769	1
ZNF578	Amp_20q11.21	0.77	1
IDS	Amp_20q11.21	0.77	1
SMAD4	Amp_20q11.21	0.77	1
Amp_1q44	Del_5q12.1	0.77	1
Amp_11p12	Amp_20q11.21	0.77	1
EP300	Del_8p23.3	0.771	1
11q-Del	Amp_2p24.3	0.771	1
Amp_2p24.3	Del_8p23.3	0.771	1
Amp_3q26.31	Del_5q35.2	0.771	1
PTEN	Del_13q14.2	0.772	1
1p-Amp	Del_6q26	0.772	1
Amp_3q26.31	Del_16q23.1	0.772	1
Del_2q22.1	Del_8p23.1	0.772	1
Del_4q35.2	Del_20p12.1	0.772	1
Del_13q14.2	Del_22q13.32	0.772	1
FBXW7	Amp_8q24.21	0.773	1
5p-Amp	Del_11q25	0.773	1
10q-Del	Amp_8q24.21	0.773	1
MUC4	Amp_1q44	0.774	1
3q-Amp	4q-Del	0.774	1
3q-Amp	Del_4q22.1	0.774	1
11q-Del	19p-Del	0.774	1
11q-Del	Del_1p13.2	0.774	1
Amp_1q21.3	Del_6q26	0.774	1
Amp_20q11.21	Del_1p36.23	0.774	1
MTOR	4p-Del	0.776	1
TRIM9	4p-Del	0.776	1
1p-Amp	Del_2q37.1	0.776	1
Del_2q37.1	Del_15q21.1	0.776	1
MTOR	3q-Amp	0.777	1
3q-Amp	Amp_21q22.13	0.777	1
3q-Amp	Del_13q14.2	0.777	1
10q-Del	Amp_5p15.33	0.777	1
18q-Del	Amp_5p15.33	0.777	1
18q-Del	Del_3p14.2	0.777	1
Amp_5p15.33	Amp_16p13.13	0.777	1
Xp-Del	Amp_3q26.31	0.779	1
Amp_3q26.31	Del_Xq21.33	0.779	1
Amp_11q22.1	Del_7q34	0.779	1
ERBB3	Del_2q37.1	0.78	1
HLA-A	Amp_3q26.31	0.78	1
HLA-B	Del_2q37.1	0.78	1
Amp_3q26.31	Del_22q13.32	0.78	1
CASP8	Del_11p15.1	0.781	1
KRAS	20p-Amp	0.781	1
TP53	Del_11p15.1	0.781	1
FAT2	Del_5q12.1	0.781	1
MED1	20p-Amp	0.781	1
20p-Amp	Amp_11q13.3	0.781	1
22q-Del	Del_11p15.1	0.781	1
ARID1A	4q-Del	0.782	1
ARID1A	Del_4q22.1	0.782	1
BAP1	3q-Amp	0.782	1
USP28	3q-Amp	0.782	1
4q-Del	Del_14q32.31	0.782	1
Amp_1q21.3	Del_8p23.3	0.782	1
Del_6p24.2	Del_14q32.31	0.782	1
Del_11q23.3	Del_13q12.11	0.782	1
Del_8p23.3	Del_14q32.31	0.783	1
MUC4	Del_16q11.2	0.784	1
MUC4	Del_16q23.1	0.784	1
4p-Del	Amp_11q22.1	0.784	1
Xp-Del	Amp_3q28	0.784	1
Amp_3q28	Del_Xq21.33	0.784	1
1q-Amp	8q-Amp	0.785	1
1q-Amp	6q-Del	0.785	1
1q-Amp	Del_17q25.3	0.785	1
17p-Del	Amp_1q44	0.785	1
17p-Del	Amp_9p24.1	0.785	1
FBXW7	Del_22q13.32	0.787	1
HLA-A	Amp_13q22.1	0.787	1
10q-Del	Amp_Xq28	0.787	1
13q-Del	Amp_Xq28	0.787	1
18q-Del	Amp_6p21.33	0.787	1
18q-Del	Amp_13q34	0.787	1
18q-Del	Amp_Xq28	0.787	1
18q-Del	Del_2q22.1	0.787	1
Amp_13q22.1	Amp_Xq28	0.787	1
Amp_16p13.13	Del_22q13.32	0.787	1
20q-Amp	3p-Del	0.788	1
3q-Amp	Del_1p36.23	0.788	1
4p-Del	Del_15q21.1	0.788	1
4p-Del	Del_20p12.1	0.788	1
Amp_5p15.33	Amp_7p11.2	0.788	1
PIK3CA	17p-Del	0.789	1
1p-Amp	8q-Amp	0.789	1
8q-Amp	Del_15q21.1	0.789	1
5q-Del	Del_15q21.1	0.789	1
Amp_8q24.21	Del_5q12.1	0.789	1
Amp_17q25.1	Del_20p12.1	0.789	1
20p-Amp	Del_13q12.11	0.79	1
Amp_1q44	Del_4q22.1	0.791	1
HLA-A	Amp_3q28	0.792	1
PIK3CA	18q-Del	0.792	1
Amp_3q28	Amp_Xq28	0.792	1
MAPK1	1q-Amp	0.793	1
MAPK1	17p-Del	0.793	1
PTPRC	17p-Del	0.793	1
TP53	17p-Del	0.793	1
1q-Amp	Del_19q13.33	0.793	1
3q-Amp	Del_5q35.2	0.793	1
17p-Del	22q-Del	0.793	1
17p-Del	Del_19q13.33	0.793	1
ERBB3	Amp_3q26.31	0.794	1
MED1	Amp_3q26.31	0.794	1
1q-Amp	Del_10q23.31	0.795	1
20q-Amp	Del_2q37.1	0.795	1
17p-Del	Amp_19q13.13	0.795	1
ERBB3	Del_10q23.31	0.796	1
FBXW7	Del_11p15.1	0.796	1
KRAS	Del_10q23.31	0.796	1
NFE2L2	Amp_11q22.1	0.796	1
FAT2	Amp_19q13.13	0.796	1
FAT2	Del_10q23.31	0.796	1
NHS	Del_5q35.2	0.796	1
SMAD4	Amp_1q21.3	0.797	1
Amp_19q13.13	Del_16q23.1	0.798	1
ARID1A	EP300	0.8	1
TCTE1	Amp_5p15.33	0.8	1
6q-Del	Amp_1q21.3	0.8	1
Amp_1q21.3	Del_17q25.3	0.8	1
Amp_1q44	Del_10q23.31	0.8	1
Amp_2p24.3	Amp_7p11.2	0.8	1
Amp_2p24.3	Del_14q32.31	0.8	1
PIK3CA	Amp_7p11.2	0.801	1
PIK3CA	Del_14q32.31	0.801	1
MUC4	Amp_13q34	0.802	1
20q-Amp	5q-Del	0.802	1
20q-Amp	Amp_9p24.1	0.802	1
20q-Amp	Del_3p14.2	0.802	1
3q-Amp	Del_15q21.1	0.802	1
Del_6q26	Del_17q25.3	0.802	1
Del_13q12.11	Del_17q25.3	0.802	1
Amp_11q22.1	Del_8p23.1	0.803	1
CASP8	20q-Amp	0.804	1
CASP8	3p-Del	0.804	1
CASP8	Del_4q35.2	0.804	1
CASP8	Del_6q26	0.804	1
CASP8	Del_13q12.11	0.804	1
ERBB3	Amp_3q28	0.804	1
MAPK1	20q-Amp	0.804	1
MAPK1	Del_4q35.2	0.804	1
MAPK1	Del_13q12.11	0.804	1
PTPRC	Del_6q26	0.804	1
RB1	3p-Del	0.804	1
RB1	Del_6q26	0.804	1
RB1	Del_13q12.11	0.804	1
TP53	3p-Del	0.804	1
TP53	Del_6q26	0.804	1
TP53	Del_13q12.11	0.804	1
MED1	Amp_3q28	0.804	1
SEMA4B	Amp_1q44	0.804	1
22q-Del	3p-Del	0.804	1
22q-Del	Del_6q26	0.804	1
3p-Del	Del_19q13.33	0.804	1
Amp_1q44	Del_Xp11.3	0.804	1
Amp_2q33.1	Amp_3q28	0.804	1
Del_13q12.11	Del_19q13.33	0.804	1
HLA-A	Del_4q22.1	0.805	1
PTEN	Del_6p24.2	0.805	1
IDS	Del_2q37.1	0.805	1
LIN9	Del_2q37.1	0.805	1
22q-Del	Amp_3q26.31	0.805	1
4q-Del	Amp_6p21.33	0.805	1
4q-Del	Amp_13q34	0.805	1
4q-Del	Del_2q22.1	0.805	1
4q-Del	Del_22q13.32	0.805	1
Amp_13q34	Del_11q23.3	0.805	1
Del_2q22.1	Del_4q22.1	0.805	1
PIK3CA	STK11	0.807	1
PIK3CA	TCTE1	0.807	1
BAP1	Del_11q23.3	0.808	1
C12orf43	Del_11q23.3	0.808	1
RAB35	Del_11q23.3	0.808	1
FBXW7	Del_15q21.1	0.809	1
1p-Amp	10q-Del	0.809	1
1q-Amp	Del_13q14.2	0.809	1
10q-Del	Del_20p12.1	0.809	1
13q-Del	Del_20p12.1	0.809	1
Amp_5p15.33	Amp_11q22.1	0.809	1
Amp_13q22.1	Del_15q21.1	0.809	1
Amp_16p13.13	Del_15q21.1	0.809	1
Amp_16p13.13	Del_20p12.1	0.809	1
20p-Amp	Del_1p36.23	0.81	1
8q-Amp	Amp_17q25.1	0.81	1
8q-Amp	Del_17q25.3	0.81	1
5q-Del	Amp_9p24.1	0.81	1
6q-Del	Del_17q25.3	0.81	1
Amp_9p24.1	Del_17q25.3	0.81	1
1q-Amp	13q-Del	0.813	1
17p-Del	Amp_16p13.13	0.813	1
Amp_8q24.21	Del_1p13.2	0.813	1
TRIM9	Del_11q23.3	0.814	1
CASP8	4p-Del	0.815	1
MAPK1	4p-Del	0.815	1
RB1	4p-Del	0.815	1
TP53	4p-Del	0.815	1
3p-Del	Amp_19q13.13	0.815	1
ARID1A	Del_4q21.3	0.816	1
HLA-A	11q-Del	0.816	1
11q-Del	Del_22q13.32	0.816	1
Amp_7p11.2	Del_16q11.2	0.816	1
Amp_15q26.1	Del_16q11.2	0.816	1
Amp_Xq28	Del_8p23.3	0.816	1
Del_2q22.1	Del_8p23.3	0.816	1
EP300	3q-Amp	0.817	1
8q-Amp	4p-Del	0.817	1
MTOR	5p-Amp	0.818	1
TRIM9	5p-Amp	0.818	1
TRIM9	11q-Del	0.818	1
5p-Amp	Amp_21q22.13	0.818	1
BAP1	Del_11q25	0.82	1
C12orf43	Del_11q25	0.82	1
RAB35	Del_11q25	0.82	1
SEMA4B	Amp_20q11.21	0.821	1
Amp_20q11.21	Del_1p13.2	0.821	1
EP300	HLA-A	0.822	1
EP300	Del_2q22.1	0.822	1
EP300	Del_22q13.32	0.822	1
FAT2	11p-Del	0.822	1
NHS	Del_2q37.1	0.822	1
Amp_1q44	Del_18q21.2	0.822	1
Amp_2p24.3	Amp_Xq28	0.822	1
Amp_2p24.3	Del_22q13.32	0.822	1
Amp_6p21.33	Del_18q21.2	0.822	1
Amp_Xq28	Del_18q21.2	0.822	1
Del_2q22.1	Del_18q21.2	0.822	1
PIK3CA	Del_17p12	0.823	1
Amp_1q44	Amp_7p11.2	0.823	1
Amp_7p11.2	Del_17p12	0.823	1
Del_14q32.31	Del_17p12	0.823	1
NHS	Amp_19q13.13	0.824	1
NHS	Del_10q23.31	0.824	1
CASP8	Del_8p23.1	0.826	1
CASP8	Del_13q14.2	0.826	1
MAPK1	Del_13q14.2	0.826	1
1p-Amp	Del_6p24.2	0.826	1
22q-Del	Del_8p23.1	0.826	1
4q-Del	Del_15q21.1	0.826	1
Del_6p24.2	Del_15q21.1	0.826	1
ZNF750	17p-Del	0.827	1
3q-Amp	3p-Del	0.827	1
FBXW7	8q-Amp	0.828	1
FBXW7	Del_17q25.3	0.828	1
8q-Amp	Amp_16p13.13	0.828	1
13q-Del	6q-Del	0.828	1
6q-Del	Amp_16p13.13	0.828	1
8p-Del	Amp_1q21.3	0.828	1
Amp_1q21.3	Amp_11q22.1	0.828	1
Amp_13q22.1	Amp_17q25.1	0.828	1
FBXW7	Del_13q12.11	0.829	1
20q-Amp	10q-Del	0.829	1
20q-Amp	Amp_13q22.1	0.829	1
18q-Del	3p-Del	0.829	1
Amp_13q34	Del_11q25	0.829	1
Amp_16p13.13	Del_4q35.2	0.829	1
Del_7q34	Del_8p23.3	0.829	1
PTEN	Amp_5p15.33	0.83	1
TRIM9	Del_11q25	0.83	1
11q-Del	Amp_5p15.33	0.83	1
Amp_1q21.3	Del_13q14.2	0.83	1
Amp_3q28	Del_1p13.2	0.83	1
Amp_5p15.33	Del_22q13.32	0.83	1
Amp_Xq28	Del_3p14.2	0.83	1
NFE2L2	Del_11q23.3	0.831	1
3q-Amp	Del_5q12.1	0.831	1
3p-Del	Amp_8q24.21	0.831	1
Amp_3q26.31	Del_5q12.1	0.831	1
Del_7q34	Del_14q32.31	0.831	1
6q-Del	Del_13q14.2	0.832	1
Amp_9p24.1	Del_8p23.1	0.832	1
Amp_17q25.1	Del_8p23.1	0.832	1
3q-Amp	22q-Del	0.834	1
11p-Del	Del_16q23.1	0.835	1
HLA-A	Del_4q21.3	0.838	1
HLA-A	Del_16q11.2	0.838	1
MUC4	Amp_11q22.1	0.838	1
PTEN	Del_16q23.1	0.838	1
ZNF750	Del_13q12.11	0.838	1
1q-Amp	4q-Del	0.838	1
1q-Amp	Del_4q22.1	0.838	1
Amp_13q34	Del_16q11.2	0.838	1
Amp_13q34	Del_16q23.1	0.838	1
Amp_Xq28	Del_16q11.2	0.838	1
Del_2q22.1	Del_4q21.3	0.838	1
PIK3CA	Del_2q22.1	0.841	1
Amp_11q22.1	Del_10q23.31	0.841	1
EP300	Del_20p12.1	0.842	1
Amp_2p24.3	Del_20p12.1	0.842	1
MTOR	Amp_1q44	0.845	1
FAT2	Del_11p15.1	0.845	1
SEMA4B	Amp_1q21.3	0.845	1
TRIM9	Del_17p12	0.845	1
8q-Amp	Del_6p24.2	0.845	1
4q-Del	Del_17q25.3	0.845	1
Amp_11q22.1	Amp_15q26.1	0.845	1
Amp_11q22.1	Del_14q32.31	0.845	1
Amp_15q26.1	Del_5q35.2	0.845	1
Del_5q35.2	Del_14q32.31	0.845	1
FBXW7	13q-Del	0.846	1
FBXW7	18q-Del	0.846	1
FBXW7	Del_2q37.1	0.846	1
10q-Del	Del_2q37.1	0.846	1
13q-Del	18q-Del	0.846	1
13q-Del	Amp_16p13.13	0.846	1
18q-Del	Amp_16p13.13	0.846	1
Amp_16p13.13	Del_2q37.1	0.846	1
Amp_20q11.21	Del_14q32.31	0.846	1
ERBB2	4p-Del	0.848	1
ZNF750	4p-Del	0.848	1
EP300	Amp_3q28	0.849	1
MUC4	1q-Amp	0.849	1
1p-Amp	Del_11q23.3	0.849	1
Amp_1q44	Del_4q21.3	0.849	1
EP300	Amp_20q11.21	0.85	1
EP300	Del_3p14.2	0.85	1
NFE2L2	Del_11q25	0.85	1
Amp_2p24.3	Del_3p14.2	0.85	1
Amp_5p15.33	Del_18q21.2	0.85	1
Amp_19q13.13	Del_13q14.2	0.85	1
Del_3p14.2	Del_18q21.2	0.85	1
HLA-A	Del_7q34	0.852	1
PTEN	Del_7q34	0.852	1
TCTE1	3q-Amp	0.852	1
Del_4q35.2	Del_6p24.2	0.852	1
Del_7q34	Del_22q13.32	0.852	1
ERBB3	Amp_5p15.33	0.853	1
KRAS	Amp_5p15.33	0.853	1
FAT2	Amp_5p15.33	0.853	1
3q-Amp	Del_16q23.1	0.853	1
Amp_1q44	Del_22q13.32	0.853	1
Amp_5p15.33	Amp_11q13.3	0.853	1
Amp_6p21.33	Del_17p12	0.853	1
CASP8	Del_8p23.3	0.854	1
MAPK1	11q-Del	0.854	1
PTPRC	11q-Del	0.854	1
RB1	11q-Del	0.854	1
22q-Del	Del_8p23.3	0.854	1
ERBB3	17p-Del	0.856	1
KRAS	1q-Amp	0.856	1
MED1	17p-Del	0.856	1
SMAD4	Amp_5p15.33	0.856	1
17p-Del	Amp_11q13.3	0.856	1
ERBB2	Del_13q14.2	0.857	1
ZNF750	Del_13q14.2	0.857	1
1p-Amp	Del_16q23.1	0.857	1
Amp_1q44	Del_8p23.1	0.857	1
Amp_16p13.13	Del_8p23.1	0.857	1
Amp_16p13.13	Del_13q14.2	0.857	1
8q-Amp	Amp_2p24.3	0.86	1
Amp_2p24.3	Del_17q25.3	0.86	1
MTOR	Amp_20q11.21	0.861	1
TRIM9	Amp_20q11.21	0.861	1
PIK3CA	Amp_2p24.3	0.862	1
PIK3CA	Amp_11p12	0.862	1
5p-Amp	11q-Del	0.862	1
HLA-A	Amp_8q24.21	0.864	1
Amp_8q24.21	Del_22q13.32	0.864	1
HLA-A	8p-Del	0.865	1
HLA-A	Amp_11q22.1	0.865	1
HLA-A	Del_5q35.2	0.865	1
PTEN	8p-Del	0.865	1
PTEN	Del_5q35.2	0.865	1
8p-Del	Amp_6p21.33	0.865	1
8p-Del	Amp_Xq28	0.865	1
Amp_13q34	Del_5q35.2	0.865	1
Amp_Xq28	Del_5q35.2	0.865	1
ERBB3	3p-Del	0.866	1
ERBB3	Del_4q35.2	0.866	1
HLA-B	3p-Del	0.866	1
FAT2	Del_6q26	0.866	1
MED1	Del_4q35.2	0.866	1
MED1	Del_6q26	0.866	1
3p-Del	Amp_11q13.3	0.866	1
Amp_11q13.3	Del_6q26	0.866	1
1p-Amp	Del_11q25	0.869	1
Amp_5p15.33	Del_10q23.31	0.869	1
NFE2L2	Del_11p15.1	0.87	1
5p-Amp	5q-Del	0.87	1
5p-Amp	6q-Del	0.87	1
Amp_15q26.1	Amp_19q13.13	0.87	1
1p-Amp	Del_7q34	0.871	1
Amp_1q44	Del_7q34	0.872	1
EP300	3p-Del	0.873	1
PIK3CA	Amp_3q26.31	0.873	1
PIK3CA	Del_2q37.1	0.873	1
TCTE1	Del_11q23.3	0.873	1
11p-Del	Amp_11q22.1	0.873	1
3p-Del	Del_18q21.2	0.873	1
ARID1A	3q-Amp	0.874	1
PIK3CA	1p-Amp	0.874	1
5q-Del	Del_16q11.2	0.874	1
Amp_13q34	Amp_20q11.21	0.874	1
Amp_17q25.1	Del_4q21.3	0.874	1
Del_4q21.3	Del_17q25.3	0.874	1
Del_16q23.1	Del_17q25.3	0.874	1
HLA-B	4p-Del	0.875	1
KRAS	4p-Del	0.875	1
MUC4	Amp_1q21.3	0.875	1
10q-Del	Amp_2p24.3	0.876	1
13q-Del	Del_18q21.2	0.876	1
HLA-A	Del_5q12.1	0.877	1
PTEN	Del_5q12.1	0.877	1
20p-Amp	Del_2q22.1	0.877	1
Amp_1q21.3	Amp_7p11.2	0.877	1
Amp_13q34	Del_5q12.1	0.877	1
MAPK1	Del_17p12	0.878	1
PTPRC	Amp_1q44	0.878	1
PTPRC	Del_17p12	0.878	1
TP53	Del_17p12	0.878	1
ZNF750	3q-Amp	0.878	1
ZNF750	Amp_3q26.31	0.878	1
22q-Del	Amp_1q44	0.878	1
Amp_1q21.3	Del_10q23.31	0.878	1
Amp_1q44	Del_19q13.33	0.878	1
Del_3p14.2	Del_16q23.1	0.878	1
1p-Amp	Del_17p12	0.879	1
1q-Amp	Del_4q21.3	0.879	1
1q-Amp	Del_16q11.2	0.879	1
1q-Amp	Amp_17q12	0.88	1
17p-Del	Amp_17q12	0.88	1
PIK3CA	Del_10q23.31	0.881	1
3q-Amp	Amp_8q24.21	0.881	1
MTOR	Amp_1q21.3	0.882	1
TRIM9	Amp_1q21.3	0.882	1
ERBB2	11q-Del	0.883	1
ERBB3	Del_8p23.1	0.883	1
HLA-B	Del_13q14.2	0.883	1
KRAS	Del_8p23.1	0.883	1
TCTE1	Del_11q25	0.883	1
1p-Amp	8p-Del	0.883	1
1p-Amp	Amp_11q22.1	0.883	1
3q-Amp	Del_7q34	0.883	1
Amp_11q22.1	Del_15q21.1	0.883	1
5p-Amp	3p-Del	0.884	1
5p-Amp	Del_6q26	0.884	1
RB1	Amp_8q24.21	0.885	1
ZNF750	Amp_3q28	0.885	1
22q-Del	Amp_8q24.21	0.885	1
Del_2q37.1	Del_14q32.31	0.886	1
NFE2L2	Amp_5p15.33	0.887	1
6q-Del	Del_7q34	0.887	1
Amp_17q25.1	Del_7q34	0.887	1
Del_7q34	Del_17q25.3	0.887	1
Amp_6p21.33	Del_10q23.31	0.888	1
Amp_19q13.13	Del_2q22.1	0.888	1
Del_10q23.31	Del_22q13.32	0.888	1
FBXW7	Del_16q23.1	0.889	1
NFE2L2	Del_4q35.2	0.889	1
PIK3CA	Del_4q21.3	0.889	1
PIK3CA	Del_16q23.1	0.889	1
NHS	Del_6q26	0.889	1
NHS	Del_13q12.11	0.889	1
3p-Del	Amp_17q12	0.889	1
3p-Del	Del_1p36.23	0.889	1
Amp_16p13.13	Del_16q11.2	0.889	1
Del_2q37.1	Del_10q23.31	0.89	1
ARID1A	11p-Del	0.891	1
EP300	Del_6p24.2	0.891	1
FBXW7	5p-Amp	0.891	1
5p-Amp	18q-Del	0.891	1
11p-Del	Amp_15q26.1	0.891	1
3p-Del	Del_16q11.2	0.891	1
Amp_16p13.13	Del_8p23.3	0.891	1
CASP8	Amp_20q11.21	0.892	1
22q-Del	Amp_20q11.21	0.892	1
Amp_1q44	Amp_11q22.1	0.892	1
Amp_1q44	Del_5q35.2	0.892	1
5p-Amp	Del_10q23.31	0.893	1
PIK3CA	Amp_17q12	0.894	1
1p-Amp	Del_5q12.1	0.894	1
Amp_3q26.31	Amp_21q22.13	0.895	1
1q-Amp	Del_7q34	0.896	1
Amp_3q28	Del_16q23.1	0.896	1
3q-Del	Amp_3q26.31	0.897	1
Amp_2p24.3	Del_8p23.1	0.897	1
Amp_9p24.1	Del_5q35.2	0.898	1
MUC4	Amp_11q13.3	0.899	1
Amp_11q22.1	Del_11p15.1	0.899	1
ZNF578	3q-Amp	0.9	1
3q-Amp	Amp_11p12	0.9	1
5q-Del	Amp_1q44	0.9	1
6q-Del	Amp_1q44	0.9	1
PTEN	Amp_1q21.3	0.901	1
Amp_1q21.3	Del_22q13.32	0.901	1
PIK3CA	Del_1p13.2	0.902	1
PIK3CA	Del_Xp11.3	0.902	1
4p-Del	Del_16q11.2	0.902	1
EP300	Amp_2p24.3	0.903	1
ZNF750	Del_11q23.3	0.904	1
ZNF750	Del_17p12	0.904	1
1p-Amp	Del_10q23.31	0.904	1
Del_10q23.31	Del_20p12.1	0.904	1
PTEN	3q-Amp	0.905	1
PTEN	Amp_3q26.31	0.905	1
3q-Amp	Amp_Xq28	0.905	1
3q-Amp	Del_22q13.32	0.905	1
Del_1p36.23	Del_13q14.2	0.905	1
ERBB3	5p-Amp	0.906	1
HLA-B	11q-Del	0.906	1
KRAS	Del_8p23.3	0.906	1
FAT2	11q-Del	0.906	1
5p-Amp	Amp_2q33.1	0.906	1
5q-Del	Amp_3q28	0.906	1
Amp_19q13.13	Del_11q23.3	0.907	1
3q-Amp	Amp_11q22.1	0.908	1
11p-Del	Amp_6p21.33	0.908	1
ARID1A	Del_11p15.1	0.909	1
20p-Amp	5q-Del	0.909	1
Amp_1q44	Del_8p23.3	0.909	1
Amp_9p24.1	Del_5q12.1	0.909	1
Amp_15q26.1	Del_11p15.1	0.909	1
Amp_Xq28	Del_2q37.1	0.909	1
Del_11p15.1	Del_14q32.31	0.909	1
PTPRC	Amp_1q21.3	0.911	1
FAT2	3q-Amp	0.911	1
1q-Amp	Amp_11q22.1	0.911	1
1q-Amp	Del_5q35.2	0.911	1
22q-Del	Amp_1q21.3	0.911	1
FBXW7	Amp_11q22.1	0.912	1
10q-Del	Amp_11q22.1	0.912	1
13q-Del	Amp_11q22.1	0.912	1
Amp_16p13.13	Del_5q35.2	0.912	1
Del_6p24.2	Del_7q34	0.914	1
EP300	Del_16q11.2	0.915	1
ZNF750	Del_11q25	0.915	1
RB1	Del_2q37.1	0.916	1
Del_2q37.1	Del_19q13.33	0.916	1
PIK3CA	Del_13q12.11	0.917	1
IDS	Del_11q23.3	0.917	1
ZNF750	Amp_20q11.21	0.917	1
17p-Del	Amp_15q26.1	0.917	1
17p-Del	Del_14q32.31	0.917	1
Amp_9p24.1	Amp_20q11.21	0.917	1
Amp_11p12	Del_11q23.3	0.917	1
20q-Amp	Del_6q26	0.918	1
20q-Amp	Del_13q12.11	0.918	1
8q-Amp	Amp_19q13.13	0.918	1
8q-Amp	Del_10q23.31	0.918	1
6q-Del	Amp_19q13.13	0.918	1
Amp_3q26.31	Amp_11p12	0.919	1
20p-Amp	18q-Del	0.921	1
20q-Amp	Amp_11q22.1	0.921	1
1p-Amp	11p-Del	0.922	1
Amp_1q44	Del_4q35.2	0.922	1
Amp_3q28	Amp_11p12	0.923	1
Amp_11q22.1	Del_6p24.2	0.923	1
ARID1A	Del_4q35.2	0.924	1
3p-Del	Amp_15q26.1	0.924	1
Amp_1q21.3	Del_7q34	0.924	1
Amp_6p21.33	Del_11p15.1	0.924	1
Amp_Xq28	Del_11p15.1	0.924	1
ANKRD12	Del_11q25	0.925	1
ERBB3	Amp_1q44	0.925	1
NFE2L2	11q-Del	0.925	1
PIK3CA	Del_3p14.2	0.925	1
IDS	Del_11q25	0.925	1
MED1	Del_17p12	0.925	1
5p-Amp	Del_18q21.2	0.925	1
Amp_19q13.13	Del_11q25	0.925	1
MTOR	Amp_5p15.33	0.926	1
TRIM9	Amp_5p15.33	0.926	1
Amp_5p15.33	Amp_21q22.13	0.926	1
Amp_13q22.1	Del_11q25	0.926	1
Del_7q34	Del_8p23.1	0.926	1
EP300	Amp_3q26.31	0.927	1
3q-Amp	Del_18q21.2	0.927	1
Amp_3q26.31	Del_18q21.2	0.927	1
PIK3CA	3q-Amp	0.928	1
PIK3CA	Del_11q23.3	0.929	1
3q-Amp	Del_17p12	0.929	1
ERBB3	Amp_8q24.21	0.93	1
FBXW7	Del_10q23.31	0.93	1
18q-Del	Amp_19q13.13	0.93	1
Amp_8q24.21	Amp_11q13.3	0.93	1
ARID1A	4p-Del	0.931	1
HLA-A	Del_11q23.3	0.931	1
PTEN	1q-Amp	0.931	1
1q-Amp	Del_22q13.32	0.931	1
17p-Del	Amp_Xq28	0.931	1
ERBB3	Del_11q23.3	0.932	1
FAT2	Del_11q23.3	0.932	1
3q-Amp	19p-Del	0.932	1
FBXW7	Amp_3q26.31	0.933	1
Amp_8q24.21	Del_10q23.31	0.933	1
Amp_13q22.1	Amp_20q11.21	0.933	1
EP300	8p-Del	0.934	1
11p-Del	Amp_1p31.3	0.934	1
11p-Del	Amp_9p24.1	0.934	1
4q-Del	Amp_1q44	0.934	1
Amp_3q28	Del_18q21.2	0.934	1
Del_7q34	Del_16q11.2	0.934	1
1p-Amp	Del_11p15.1	0.936	1
HLA-A	Del_4q35.2	0.937	1
PTEN	3p-Del	0.937	1
20q-Amp	Amp_6p21.33	0.937	1
3p-Del	Amp_Xq28	0.937	1
Amp_Xq28	Del_6q26	0.937	1
Amp_11q22.1	Del_13q14.2	0.938	1
FBXW7	Amp_3q28	0.939	1
PIK3CA	Amp_3q28	0.94	1
PIK3CA	Del_4q22.1	0.94	1
Amp_3q26.31	Del_20p12.1	0.94	1
Amp_8q24.21	Del_6p24.2	0.94	1
ERBB3	Del_11q25	0.941	1
HLA-A	Del_11q25	0.941	1
FAT2	Del_11q25	0.941	1
Amp_20q11.21	Del_10q23.31	0.941	1
Amp_20q11.21	Del_13q12.11	0.941	1
20p-Amp	Del_18q21.2	0.942	1
1p-Amp	17p-Del	0.943	1
1q-Amp	Del_20p12.1	0.943	1
20q-Amp	Del_10q23.31	0.943	1
4p-Del	Amp_6p21.33	0.943	1
Amp_1p31.3	Del_2q37.1	0.943	1
Amp_11q22.1	Del_16q11.2	0.943	1
Amp_17q25.1	Del_2q37.1	0.943	1
Del_5q35.2	Del_16q11.2	0.943	1
Amp_3q28	Del_20p12.1	0.945	1
Amp_8q24.21	Del_1p36.23	0.946	1
ARID1A	Amp_3q26.31	0.947	1
MAPK1	Amp_5p15.33	0.947	1
MAPK1	Del_3p14.2	0.947	1
MUC4	Amp_7p11.2	0.947	1
3q-Amp	5q-Del	0.947	1
Amp_9p24.1	Del_11p15.1	0.947	1
3p-Del	Del_15q21.1	0.948	1
ERBB3	Amp_1q21.3	0.949	1
HLA-A	Del_8p23.1	0.949	1
HLA-A	Del_13q14.2	0.949	1
Amp_2p24.3	Del_10q23.31	0.949	1
Amp_19q13.13	Del_18q21.2	0.949	1
Amp_Xq28	Del_8p23.1	0.949	1
8p-Del	Del_7q34	0.95	1
Del_5q12.1	Del_16q11.2	0.95	1
Del_5q12.1	Del_16q23.1	0.95	1
PIK3CA	Del_11q25	0.951	1
18q-Del	Amp_1q21.3	0.951	1
ARID1A	Amp_3q28	0.952	1
1q-Amp	5q-Del	0.952	1
5p-Amp	Amp_7p11.2	0.952	1
11q-Del	Amp_7p11.2	0.952	1
1p-Amp	4p-Del	0.954	1
PIK3CA	Amp_6p21.33	0.955	1
Amp_1q44	Del_16q11.2	0.956	1
Amp_16p13.13	Del_11p15.1	0.956	1
SEMA4B	Amp_3q26.31	0.957	1
20p-Amp	Del_7q34	0.957	1
20q-Amp	Del_17q25.3	0.957	1
8q-Amp	3p-Del	0.957	1
19p-Del	Amp_3q26.31	0.957	1
Amp_1p31.3	Del_6q26	0.957	1
Amp_17q25.1	Del_4q35.2	0.957	1
Amp_17q25.1	Del_6q26	0.957	1
Del_4q35.2	Del_17q25.3	0.957	1
Del_8p23.1	Del_10q23.31	0.957	1
MUC4	Amp_6p21.33	0.958	1
MUC4	Amp_Xq28	0.958	1
3q-Amp	17p-Del	0.958	1
5p-Amp	Amp_11q22.1	0.958	1
Amp_11q22.1	Del_8p23.3	0.958	1
SEMA4B	Amp_3q28	0.96	1
19p-Del	Amp_3q28	0.96	1
FBXW7	3q-Amp	0.961	1
FBXW7	17p-Del	0.961	1
NHS	Amp_1q21.3	0.961	1
1q-Amp	10q-Del	0.961	1
1q-Amp	18q-Del	0.961	1
3q-Amp	18q-Del	0.961	1
ERBB2	Del_3p14.2	0.962	1
HLA-A	Del_8p23.3	0.962	1
PIK3CA	Amp_1q44	0.962	1
PTEN	5p-Amp	0.962	1
ZNF750	Del_3p14.2	0.962	1
4p-Del	Amp_1p31.3	0.962	1
Amp_1q21.3	Del_4q35.2	0.962	1
5q-Del	Amp_3q26.31	0.963	1
Amp_19q13.13	Del_7q34	0.963	1
ARID1A	Del_17p12	0.964	1
Amp_15q26.1	Del_17p12	0.964	1
MTOR	Del_11q23.3	0.965	1
3p-Del	Amp_16p13.13	0.965	1
Amp_16p13.13	Del_6q26	0.965	1
Amp_16p13.13	Del_13q12.11	0.965	1
3q-Amp	Del_13q12.11	0.968	1
8p-Del	Del_10q23.31	0.968	1
MTOR	Del_11q25	0.969	1
PTPRC	3q-Amp	0.969	1
18q-Del	4p-Del	0.969	1
Amp_Xq28	Del_17p12	0.972	1
FBXW7	Del_13q14.2	0.973	1
MUC4	Amp_17q25.1	0.973	1
PIK3CA	5p-Amp	0.973	1
PIK3CA	Del_7q34	0.973	1
1q-Amp	Del_18q21.2	0.973	1
Amp_20q11.21	Del_7q34	0.973	1
Amp_13q22.1	Del_11q23.3	0.974	1
PIK3CA	5q-Del	0.975	1
PIK3CA	Amp_11q13.3	0.975	1
PIK3CA	Amp_17q25.1	0.975	1
PIK3CA	4p-Del	0.976	1
1q-Amp	Del_4q35.2	0.976	1
11q-Del	Amp_1p31.3	0.976	1
Amp_1q21.3	Del_16q11.2	0.976	1
MAPK1	Del_11q23.3	0.977	1
RB1	Del_11q23.3	0.977	1
18q-Del	Amp_3q26.31	0.978	1
Amp_1q44	Del_20p12.1	0.978	1
Amp_11q22.1	Amp_20q11.21	0.978	1
4p-Del	Del_18q21.2	0.979	1
Amp_16p13.13	Del_3p14.2	0.979	1
ARID1A	Del_2q37.1	0.98	1
MAPK1	Del_11q25	0.98	1
PIK3CA	Amp_11q22.1	0.98	1
RB1	Del_11q25	0.98	1
18q-Del	Amp_3q28	0.98	1
FBXW7	11q-Del	0.981	1
3p-Del	Del_16q23.1	0.981	1
Amp_3q26.31	Amp_11q22.1	0.981	1
Amp_17q12	Del_3p14.2	0.981	1
KRAS	Amp_3q26.31	0.982	1
PIK3CA	13q-Del	0.982	1
PIK3CA	Del_1p36.23	0.982	1
Amp_2p24.3	Del_13q14.2	0.982	1
KRAS	Amp_3q28	0.983	1
4p-Del	Del_16q23.1	0.983	1
Amp_1p31.3	Del_17p12	0.983	1
Amp_1q44	Del_17q25.3	0.983	1
20q-Amp	Del_7q34	0.984	1
3q-Amp	Del_20p12.1	0.984	1
Del_11q23.3	Del_22q13.32	0.984	1
ERBB2	Del_11q23.3	0.985	1
PIK3CA	Del_5q12.1	0.985	1
ERBB2	Del_11q25	0.987	1
FBXW7	Del_17p12	0.987	1
PIK3CA	Amp_5p15.33	0.987	1
10q-Del	Amp_1q44	0.987	1
18q-Del	Amp_1q44	0.987	1
Del_11q25	Del_22q13.32	0.987	1
PIK3CA	1q-Amp	0.988	1
Amp_1q21.3	Del_20p12.1	0.988	1
PTPRC	Amp_3q26.31	0.989	1
ANKRD12	Amp_3q26.31	0.99	1
ARID1A	Amp_5p15.33	0.99	1
HLA-B	Del_11q23.3	0.99	1
PTPRC	Amp_3q28	0.99	1
MED1	Del_11q23.3	0.99	1
Del_3p14.2	Del_14q32.31	0.99	1
ANKRD12	Amp_3q28	0.991	1
PIK3CA	3p-Del	0.991	1
PIK3CA	Amp_15q26.1	0.991	1
20p-Amp	Del_2q37.1	0.991	1
HLA-B	Del_11q25	0.992	1
MED1	Del_11q25	0.992	1
PTEN	Del_3p14.2	0.993	1
10q-Del	Amp_1q21.3	0.993	1
11q-Del	Amp_11q22.1	0.994	1
FBXW7	Del_11q23.3	0.995	1
1p-Amp	Del_3p14.2	0.995	1
Amp_3q28	Amp_11q22.1	0.995	1
FBXW7	Del_11q25	0.996	1
PIK3CA	Del_5q35.2	0.996	1
11q-Del	Amp_19q13.13	0.996	1
PIK3CA	Amp_1q21.3	0.997	1
Amp_1p31.3	Del_3p14.2	0.997	1
ARID1A	Del_11q25	0.998	1
PIK3CA	Del_4q35.2	0.998	1
PIK3CA	4q-Del	0.999	1
ANKRD12	C3orf70	1	1
ANKRD12	EP300	1	1
ANKRD12	FBXW7	1	1
ANKRD12	KRAS	1	1
ANKRD12	MAPK1	1	1
ANKRD12	MTOR	1	1
ANKRD12	STK11	1	1
ANKRD12	TP53	1	1
ANKRD12	ZNF578	1	1
ANKRD12	BAP1	1	1
ANKRD12	C12orf43	1	1
ANKRD12	IDS	1	1
ANKRD12	LIN9	1	1
ANKRD12	RAB35	1	1
ANKRD12	SMAD4	1	1
ANKRD12	TRIM9	1	1
ANKRD12	1p-Amp	1	1
ANKRD12	3q-Amp	1	1
ANKRD12	8q-Amp	1	1
ANKRD12	11q-Del	1	1
ANKRD12	18q-Del	1	1
ANKRD12	19p-Del	1	1
ANKRD12	22q-Del	1	1
ANKRD12	3q-Del	1	1
ANKRD12	4p-Del	1	1
ANKRD12	4q-Del	1	1
ANKRD12	5q-Del	1	1
ANKRD12	6q-Del	1	1
ANKRD12	8p-Del	1	1
ANKRD12	Xp-Del	1	1
ANKRD12	Amp_1p31.3	1	1
ANKRD12	Amp_2p24.3	1	1
ANKRD12	Amp_2q33.1	1	1
ANKRD12	Amp_6p21.33	1	1
ANKRD12	Amp_7p11.2	1	1
ANKRD12	Amp_8q24.21	1	1
ANKRD12	Amp_9p24.1	1	1
ANKRD12	Amp_11p12	1	1
ANKRD12	Amp_11q13.3	1	1
ANKRD12	Amp_15q26.1	1	1
ANKRD12	Amp_16p13.13	1	1
ANKRD12	Amp_17q12	1	1
ANKRD12	Amp_17q25.1	1	1
ANKRD12	Amp_21q22.13	1	1
ANKRD12	Amp_Xq28	1	1
ANKRD12	Del_1p36.23	1	1
ANKRD12	Del_1p13.2	1	1
ANKRD12	Del_2q37.1	1	1
ANKRD12	Del_4q21.3	1	1
ANKRD12	Del_4q22.1	1	1
ANKRD12	Del_4q35.2	1	1
ANKRD12	Del_5q35.2	1	1
ANKRD12	Del_6q26	1	1
ANKRD12	Del_7q34	1	1
ANKRD12	Del_8p23.3	1	1
ANKRD12	Del_8p23.1	1	1
ANKRD12	Del_11q23.3	1	1
ANKRD12	Del_14q32.31	1	1
ANKRD12	Del_15q21.1	1	1
ANKRD12	Del_17q25.3	1	1
ANKRD12	Del_18q21.2	1	1
ANKRD12	Del_19q13.33	1	1
ANKRD12	Del_20p12.1	1	1
ANKRD12	Del_22q13.32	1	1
ANKRD12	Del_Xp11.3	1	1
ANKRD12	Del_Xq21.33	1	1
ARID1A	C3orf70	1	1
ARID1A	MAPK1	1	1
ARID1A	STK11	1	1
ARID1A	BAP1	1	1
ARID1A	LIN9	1	1
ARID1A	SEMA4B	1	1
ARID1A	5p-Amp	1	1
ARID1A	10q-Del	1	1
ARID1A	11q-Del	1	1
ARID1A	13q-Del	1	1
ARID1A	17p-Del	1	1
ARID1A	3p-Del	1	1
ARID1A	3q-Del	1	1
ARID1A	5q-Del	1	1
ARID1A	Xp-Del	1	1
ARID1A	Amp_6p21.33	1	1
ARID1A	Amp_7p11.2	1	1
ARID1A	Amp_11p12	1	1
ARID1A	Amp_11q22.1	1	1
ARID1A	Amp_17q25.1	1	1
ARID1A	Amp_Xq28	1	1
ARID1A	Del_2q22.1	1	1
ARID1A	Del_3p14.2	1	1
ARID1A	Del_5q12.1	1	1
ARID1A	Del_5q35.2	1	1
ARID1A	Del_6p24.2	1	1
ARID1A	Del_7q34	1	1
ARID1A	Del_10q23.31	1	1
ARID1A	Del_11q23.3	1	1
ARID1A	Del_13q12.11	1	1
ARID1A	Del_13q14.2	1	1
ARID1A	Del_19q13.33	1	1
ARID1A	Del_20p12.1	1	1
ARID1A	Del_Xp11.3	1	1
ARID1A	Del_Xq21.33	1	1
C3orf70	HLA-A	1	1
C3orf70	HLA-B	1	1
C3orf70	KRAS	1	1
C3orf70	MAPK1	1	1
C3orf70	NFE2L2	1	1
C3orf70	PTPRC	1	1
C3orf70	STK11	1	1
C3orf70	TP53	1	1
C3orf70	BAP1	1	1
C3orf70	C12orf43	1	1
C3orf70	FAT2	1	1
C3orf70	IDS	1	1
C3orf70	LIN9	1	1
C3orf70	MED1	1	1
C3orf70	RAB35	1	1
C3orf70	SEMA4B	1	1
C3orf70	SMAD4	1	1
C3orf70	TCTE1	1	1
C3orf70	TRIM9	1	1
C3orf70	USP28	1	1
C3orf70	ZNF750	1	1
C3orf70	1p-Amp	1	1
C3orf70	1q-Amp	1	1
C3orf70	10q-Del	1	1
C3orf70	13q-Del	1	1
C3orf70	17p-Del	1	1
C3orf70	18q-Del	1	1
C3orf70	19p-Del	1	1
C3orf70	22q-Del	1	1
C3orf70	3p-Del	1	1
C3orf70	3q-Del	1	1
C3orf70	4q-Del	1	1
C3orf70	5q-Del	1	1
C3orf70	6q-Del	1	1
C3orf70	8p-Del	1	1
C3orf70	Xp-Del	1	1
C3orf70	Amp_2p24.3	1	1
C3orf70	Amp_2q33.1	1	1
C3orf70	Amp_7p11.2	1	1
C3orf70	Amp_9p24.1	1	1
C3orf70	Amp_11q13.3	1	1
C3orf70	Amp_11q22.1	1	1
C3orf70	Amp_13q22.1	1	1
C3orf70	Amp_13q34	1	1
C3orf70	Amp_15q26.1	1	1
C3orf70	Amp_16p13.13	1	1
C3orf70	Amp_21q22.13	1	1
C3orf70	Del_1p36.23	1	1
C3orf70	Del_1p13.2	1	1
C3orf70	Del_2q22.1	1	1
C3orf70	Del_3p14.2	1	1
C3orf70	Del_4q21.3	1	1
C3orf70	Del_4q22.1	1	1
C3orf70	Del_4q35.2	1	1
C3orf70	Del_6p24.2	1	1
C3orf70	Del_6q26	1	1
C3orf70	Del_8p23.3	1	1
C3orf70	Del_8p23.1	1	1
C3orf70	Del_10q23.31	1	1
C3orf70	Del_13q12.11	1	1
C3orf70	Del_13q14.2	1	1
C3orf70	Del_16q11.2	1	1
C3orf70	Del_16q23.1	1	1
C3orf70	Del_17p12	1	1
C3orf70	Del_17q25.3	1	1
C3orf70	Del_18q21.2	1	1
C3orf70	Del_20p12.1	1	1
C3orf70	Del_22q13.32	1	1
C3orf70	Del_Xp11.3	1	1
C3orf70	Del_Xq21.33	1	1
CASP8	ERBB3	1	1
CASP8	FBXW7	1	1
CASP8	KRAS	1	1
CASP8	MAPK1	1	1
CASP8	STK11	1	1
CASP8	ZNF578	1	1
CASP8	BAP1	1	1
CASP8	IDS	1	1
CASP8	LIN9	1	1
CASP8	RAB35	1	1
CASP8	SMAD4	1	1
CASP8	8q-Amp	1	1
CASP8	18q-Del	1	1
CASP8	19p-Del	1	1
CASP8	22q-Del	1	1
CASP8	3q-Del	1	1
CASP8	4q-Del	1	1
CASP8	5q-Del	1	1
CASP8	6q-Del	1	1
CASP8	Xp-Del	1	1
CASP8	Amp_2p24.3	1	1
CASP8	Amp_11p12	1	1
CASP8	Amp_17q12	1	1
CASP8	Amp_17q25.1	1	1
CASP8	Amp_21q22.13	1	1
CASP8	Del_1p36.23	1	1
CASP8	Del_1p13.2	1	1
CASP8	Del_2q22.1	1	1
CASP8	Del_5q12.1	1	1
CASP8	Del_5q35.2	1	1
CASP8	Del_16q11.2	1	1
CASP8	Del_17q25.3	1	1
CASP8	Del_18q21.2	1	1
CASP8	Del_20p12.1	1	1
CASP8	Del_22q13.32	1	1
CASP8	Del_Xp11.3	1	1
CASP8	Del_Xq21.33	1	1
EP300	PTPRC	1	1
EP300	BAP1	1	1
EP300	RAB35	1	1
EP300	SMAD4	1	1
EP300	18q-Del	1	1
EP300	19p-Del	1	1
EP300	22q-Del	1	1
EP300	3q-Del	1	1
EP300	Xp-Del	1	1
EP300	Amp_7p11.2	1	1
EP300	Amp_11p12	1	1
EP300	Amp_11q13.3	1	1
EP300	Del_1p36.23	1	1
EP300	Del_1p13.2	1	1
EP300	Del_18q21.2	1	1
EP300	Del_Xq21.33	1	1
ERBB2	KRAS	1	1
ERBB2	MAPK1	1	1
ERBB2	PTPRC	1	1
ERBB2	STK11	1	1
ERBB2	BAP1	1	1
ERBB2	C12orf43	1	1
ERBB2	MED1	1	1
ERBB2	RAB35	1	1
ERBB2	SMAD4	1	1
ERBB2	TCTE1	1	1
ERBB2	8q-Amp	1	1
ERBB2	13q-Del	1	1
ERBB2	19p-Del	1	1
ERBB2	22q-Del	1	1
ERBB2	3p-Del	1	1
ERBB2	3q-Del	1	1
ERBB2	4q-Del	1	1
ERBB2	5q-Del	1	1
ERBB2	Xp-Del	1	1
ERBB2	Amp_2p24.3	1	1
ERBB2	Amp_6p21.33	1	1
ERBB2	Amp_7p11.2	1	1
ERBB2	Amp_9p24.1	1	1
ERBB2	Amp_11p12	1	1
ERBB2	Amp_11q13.3	1	1
ERBB2	Amp_11q22.1	1	1
ERBB2	Amp_15q26.1	1	1
ERBB2	Amp_21q22.13	1	1
ERBB2	Amp_Xq28	1	1
ERBB2	Del_2q22.1	1	1
ERBB2	Del_4q35.2	1	1
ERBB2	Del_13q12.11	1	1
ERBB2	Del_Xq21.33	1	1
ERBB3	KRAS	1	1
ERBB3	MAPK1	1	1
ERBB3	STK11	1	1
ERBB3	BAP1	1	1
ERBB3	C12orf43	1	1
ERBB3	LIN9	1	1
ERBB3	RAB35	1	1
ERBB3	SEMA4B	1	1
ERBB3	USP28	1	1
ERBB3	1p-Amp	1	1
ERBB3	1q-Amp	1	1
ERBB3	8q-Amp	1	1
ERBB3	22q-Del	1	1
ERBB3	3q-Del	1	1
ERBB3	Xp-Del	1	1
ERBB3	Amp_1p31.3	1	1
ERBB3	Amp_6p21.33	1	1
ERBB3	Amp_7p11.2	1	1
ERBB3	Amp_11p12	1	1
ERBB3	Amp_11q13.3	1	1
ERBB3	Amp_13q22.1	1	1
ERBB3	Amp_13q34	1	1
ERBB3	Amp_Xq28	1	1
ERBB3	Del_15q21.1	1	1
ERBB3	Del_19q13.33	1	1
ERBB3	Del_22q13.32	1	1
ERBB3	Del_Xp11.3	1	1
ERBB3	Del_Xq21.33	1	1
FBXW7	NFE2L2	1	1
FBXW7	PTEN	1	1
FBXW7	PTPRC	1	1
FBXW7	STK11	1	1
FBXW7	BAP1	1	1
FBXW7	C12orf43	1	1
FBXW7	IDS	1	1
FBXW7	LIN9	1	1
FBXW7	RAB35	1	1
FBXW7	SEMA4B	1	1
FBXW7	USP28	1	1
FBXW7	10q-Del	1	1
FBXW7	Xp-Del	1	1
FBXW7	Amp_2q33.1	1	1
FBXW7	Amp_6p21.33	1	1
FBXW7	Amp_9p24.1	1	1
FBXW7	Amp_11q13.3	1	1
FBXW7	Del_1p36.23	1	1
FBXW7	Del_2q22.1	1	1
FBXW7	Del_16q11.2	1	1
FBXW7	Del_19q13.33	1	1
FBXW7	Del_Xp11.3	1	1
FBXW7	Del_Xq21.33	1	1
HLA-A	KRAS	1	1
HLA-A	MAPK1	1	1
HLA-A	BAP1	1	1
HLA-A	LIN9	1	1
HLA-A	8q-Amp	1	1
HLA-A	18q-Del	1	1
HLA-A	4p-Del	1	1
HLA-A	4q-Del	1	1
HLA-A	6q-Del	1	1
HLA-A	Xp-Del	1	1
HLA-A	Amp_2p24.3	1	1
HLA-A	Amp_7p11.2	1	1
HLA-A	Amp_11p12	1	1
HLA-A	Amp_11q13.3	1	1
HLA-A	Amp_17q12	1	1
HLA-A	Amp_17q25.1	1	1
HLA-A	Amp_21q22.13	1	1
HLA-A	Amp_Xq28	1	1
HLA-A	Del_1p36.23	1	1
HLA-A	Del_14q32.31	1	1
HLA-A	Del_18q21.2	1	1
HLA-A	Del_19q13.33	1	1
HLA-A	Del_20p12.1	1	1
HLA-A	Del_Xp11.3	1	1
HLA-A	Del_Xq21.33	1	1
HLA-B	KRAS	1	1
HLA-B	STK11	1	1
HLA-B	BAP1	1	1
HLA-B	RAB35	1	1
HLA-B	8q-Amp	1	1
HLA-B	19p-Del	1	1
HLA-B	22q-Del	1	1
HLA-B	3q-Del	1	1
HLA-B	4q-Del	1	1
HLA-B	6q-Del	1	1
HLA-B	Xp-Del	1	1
HLA-B	Amp_6p21.33	1	1
HLA-B	Amp_7p11.2	1	1
HLA-B	Amp_11q13.3	1	1
HLA-B	Amp_17q12	1	1
HLA-B	Amp_21q22.13	1	1
HLA-B	Del_1p36.23	1	1
HLA-B	Del_1p13.2	1	1
HLA-B	Del_4q21.3	1	1
HLA-B	Del_4q35.2	1	1
HLA-B	Del_6p24.2	1	1
HLA-B	Del_6q26	1	1
HLA-B	Del_7q34	1	1
HLA-B	Del_14q32.31	1	1
HLA-B	Del_Xp11.3	1	1
HLA-B	Del_Xq21.33	1	1
KRAS	MAPK1	1	1
KRAS	MTOR	1	1
KRAS	MUC4	1	1
KRAS	NFE2L2	1	1
KRAS	RB1	1	1
KRAS	ZNF578	1	1
KRAS	BAP1	1	1
KRAS	C12orf43	1	1
KRAS	FAT2	1	1
KRAS	IDS	1	1
KRAS	MED1	1	1
KRAS	RAB35	1	1
KRAS	SEMA4B	1	1
KRAS	SMAD4	1	1
KRAS	TCTE1	1	1
KRAS	TRIM9	1	1
KRAS	USP28	1	1
KRAS	ZNF750	1	1
KRAS	1p-Amp	1	1
KRAS	10q-Del	1	1
KRAS	11p-Del	1	1
KRAS	19p-Del	1	1
KRAS	22q-Del	1	1
KRAS	3p-Del	1	1
KRAS	3q-Del	1	1
KRAS	5q-Del	1	1
KRAS	8p-Del	1	1
KRAS	Xp-Del	1	1
KRAS	Amp_1p31.3	1	1
KRAS	Amp_2p24.3	1	1
KRAS	Amp_2q33.1	1	1
KRAS	Amp_6p21.33	1	1
KRAS	Amp_7p11.2	1	1
KRAS	Amp_9p24.1	1	1
KRAS	Amp_11p12	1	1
KRAS	Amp_11q13.3	1	1
KRAS	Amp_11q22.1	1	1
KRAS	Amp_13q22.1	1	1
KRAS	Amp_13q34	1	1
KRAS	Amp_15q26.1	1	1
KRAS	Amp_17q12	1	1
KRAS	Amp_17q25.1	1	1
KRAS	Amp_19q13.13	1	1
KRAS	Amp_21q22.13	1	1
KRAS	Amp_Xq28	1	1
KRAS	Del_1p13.2	1	1
KRAS	Del_2q22.1	1	1
KRAS	Del_2q37.1	1	1
KRAS	Del_3p14.2	1	1
KRAS	Del_4q21.3	1	1
KRAS	Del_4q22.1	1	1
KRAS	Del_4q35.2	1	1
KRAS	Del_5q12.1	1	1
KRAS	Del_5q35.2	1	1
KRAS	Del_7q34	1	1
KRAS	Del_11p15.1	1	1
KRAS	Del_17q25.3	1	1
KRAS	Del_19q13.33	1	1
KRAS	Del_22q13.32	1	1
KRAS	Del_Xp11.3	1	1
KRAS	Del_Xq21.33	1	1
MAPK1	MTOR	1	1
MAPK1	MUC4	1	1
MAPK1	NFE2L2	1	1
MAPK1	PTPRC	1	1
MAPK1	RB1	1	1
MAPK1	STK11	1	1
MAPK1	TP53	1	1
MAPK1	ZNF578	1	1
MAPK1	BAP1	1	1
MAPK1	C12orf43	1	1
MAPK1	IDS	1	1
MAPK1	NHS	1	1
MAPK1	RAB35	1	1
MAPK1	SEMA4B	1	1
MAPK1	TCTE1	1	1
MAPK1	USP28	1	1
MAPK1	5p-Amp	1	1
MAPK1	8q-Amp	1	1
MAPK1	11p-Del	1	1
MAPK1	18q-Del	1	1
MAPK1	19p-Del	1	1
MAPK1	3p-Del	1	1
MAPK1	3q-Del	1	1
MAPK1	4q-Del	1	1
MAPK1	5q-Del	1	1
MAPK1	6q-Del	1	1
MAPK1	8p-Del	1	1
MAPK1	Xp-Del	1	1
MAPK1	Amp_1q44	1	1
MAPK1	Amp_2q33.1	1	1
MAPK1	Amp_6p21.33	1	1
MAPK1	Amp_7p11.2	1	1
MAPK1	Amp_8q24.21	1	1
MAPK1	Amp_9p24.1	1	1
MAPK1	Amp_11p12	1	1
MAPK1	Amp_11q13.3	1	1
MAPK1	Amp_11q22.1	1	1
MAPK1	Amp_13q22.1	1	1
MAPK1	Amp_13q34	1	1
MAPK1	Amp_17q12	1	1
MAPK1	Amp_19q13.13	1	1
MAPK1	Amp_21q22.13	1	1
MAPK1	Amp_Xq28	1	1
MAPK1	Del_1p36.23	1	1
MAPK1	Del_2q22.1	1	1
MAPK1	Del_2q37.1	1	1
MAPK1	Del_4q22.1	1	1
MAPK1	Del_5q12.1	1	1
MAPK1	Del_5q35.2	1	1
MAPK1	Del_6q26	1	1
MAPK1	Del_8p23.3	1	1
MAPK1	Del_8p23.1	1	1
MAPK1	Del_11p15.1	1	1
MAPK1	Del_14q32.31	1	1
MAPK1	Del_15q21.1	1	1
MAPK1	Del_16q11.2	1	1
MAPK1	Del_18q21.2	1	1
MAPK1	Del_19q13.33	1	1
MAPK1	Del_20p12.1	1	1
MAPK1	Del_Xp11.3	1	1
MAPK1	Del_Xq21.33	1	1
MTOR	PTPRC	1	1
MTOR	STK11	1	1
MTOR	TP53	1	1
MTOR	C12orf43	1	1
MTOR	LIN9	1	1
MTOR	MED1	1	1
MTOR	RAB35	1	1
MTOR	SEMA4B	1	1
MTOR	SMAD4	1	1
MTOR	TCTE1	1	1
MTOR	USP28	1	1
MTOR	1p-Amp	1	1
MTOR	20p-Amp	1	1
MTOR	11p-Del	1	1
MTOR	11q-Del	1	1
MTOR	13q-Del	1	1
MTOR	17p-Del	1	1
MTOR	18q-Del	1	1
MTOR	19p-Del	1	1
MTOR	22q-Del	1	1
MTOR	3q-Del	1	1
MTOR	4q-Del	1	1
MTOR	5q-Del	1	1
MTOR	Xp-Del	1	1
MTOR	Amp_1p31.3	1	1
MTOR	Amp_2p24.3	1	1
MTOR	Amp_7p11.2	1	1
MTOR	Amp_11q13.3	1	1
MTOR	Amp_11q22.1	1	1
MTOR	Amp_13q22.1	1	1
MTOR	Amp_13q34	1	1
MTOR	Amp_19q13.13	1	1
MTOR	Amp_21q22.13	1	1
MTOR	Amp_Xq28	1	1
MTOR	Del_1p13.2	1	1
MTOR	Del_2q22.1	1	1
MTOR	Del_3p14.2	1	1
MTOR	Del_4q21.3	1	1
MTOR	Del_4q22.1	1	1
MTOR	Del_6p24.2	1	1
MTOR	Del_11p15.1	1	1
MTOR	Del_13q12.11	1	1
MTOR	Del_13q14.2	1	1
MTOR	Del_14q32.31	1	1
MTOR	Del_15q21.1	1	1
MTOR	Del_16q11.2	1	1
MTOR	Del_16q23.1	1	1
MTOR	Del_17p12	1	1
MTOR	Del_18q21.2	1	1
MTOR	Del_20p12.1	1	1
MTOR	Del_Xp11.3	1	1
MTOR	Del_Xq21.33	1	1
MUC4	STK11	1	1
MUC4	BAP1	1	1
MUC4	22q-Del	1	1
MUC4	3q-Del	1	1
MUC4	Xp-Del	1	1
MUC4	Del_19q13.33	1	1
MUC4	Del_22q13.32	1	1
MUC4	Del_Xp11.3	1	1
NFE2L2	PTEN	1	1
NFE2L2	STK11	1	1
NFE2L2	ZNF578	1	1
NFE2L2	BAP1	1	1
NFE2L2	IDS	1	1
NFE2L2	LIN9	1	1
NFE2L2	RAB35	1	1
NFE2L2	SEMA4B	1	1
NFE2L2	SMAD4	1	1
NFE2L2	11p-Del	1	1
NFE2L2	18q-Del	1	1
NFE2L2	22q-Del	1	1
NFE2L2	3q-Del	1	1
NFE2L2	4q-Del	1	1
NFE2L2	Xp-Del	1	1
NFE2L2	Amp_2p24.3	1	1
NFE2L2	Amp_11p12	1	1
NFE2L2	Amp_19q13.13	1	1
NFE2L2	Amp_21q22.13	1	1
NFE2L2	Amp_Xq28	1	1
NFE2L2	Del_1p36.23	1	1
NFE2L2	Del_1p13.2	1	1
NFE2L2	Del_4q21.3	1	1
NFE2L2	Del_4q22.1	1	1
NFE2L2	Del_7q34	1	1
NFE2L2	Del_14q32.31	1	1
NFE2L2	Del_16q11.2	1	1
NFE2L2	Del_16q23.1	1	1
NFE2L2	Del_18q21.2	1	1
NFE2L2	Del_19q13.33	1	1
NFE2L2	Del_20p12.1	1	1
NFE2L2	Del_Xp11.3	1	1
PIK3CA	19p-Del	1	1
PIK3CA	3q-Del	1	1
PIK3CA	Xp-Del	1	1
PIK3CA	Amp_21q22.13	1	1
PTEN	ZNF578	1	1
PTEN	C12orf43	1	1
PTEN	LIN9	1	1
PTEN	MED1	1	1
PTEN	SMAD4	1	1
PTEN	TCTE1	1	1
PTEN	TRIM9	1	1
PTEN	1p-Amp	1	1
PTEN	18q-Del	1	1
PTEN	19p-Del	1	1
PTEN	22q-Del	1	1
PTEN	3q-Del	1	1
PTEN	Xp-Del	1	1
PTEN	Amp_2p24.3	1	1
PTEN	Amp_2q33.1	1	1
PTEN	Amp_7p11.2	1	1
PTEN	Amp_11q13.3	1	1
PTEN	Amp_11q22.1	1	1
PTEN	Amp_13q22.1	1	1
PTEN	Amp_13q34	1	1
PTEN	Amp_15q26.1	1	1
PTEN	Amp_16p13.13	1	1
PTEN	Amp_17q12	1	1
PTEN	Amp_19q13.13	1	1
PTEN	Amp_Xq28	1	1
PTEN	Del_1p13.2	1	1
PTEN	Del_2q22.1	1	1
PTEN	Del_2q37.1	1	1
PTEN	Del_14q32.31	1	1
PTEN	Del_16q11.2	1	1
PTEN	Del_18q21.2	1	1
PTEN	Del_20p12.1	1	1
PTEN	Del_Xp11.3	1	1
PTEN	Del_Xq21.33	1	1
PTPRC	RB1	1	1
PTPRC	STK11	1	1
PTPRC	ZNF578	1	1
PTPRC	BAP1	1	1
PTPRC	C12orf43	1	1
PTPRC	IDS	1	1
PTPRC	LIN9	1	1
PTPRC	RAB35	1	1
PTPRC	SEMA4B	1	1
PTPRC	ZNF750	1	1
PTPRC	1q-Amp	1	1
PTPRC	20p-Amp	1	1
PTPRC	10q-Del	1	1
PTPRC	11p-Del	1	1
PTPRC	3p-Del	1	1
PTPRC	3q-Del	1	1
PTPRC	4p-Del	1	1
PTPRC	4q-Del	1	1
PTPRC	5q-Del	1	1
PTPRC	6q-Del	1	1
PTPRC	Xp-Del	1	1
PTPRC	Amp_7p11.2	1	1
PTPRC	Amp_11p12	1	1
PTPRC	Amp_13q22.1	1	1
PTPRC	Amp_13q34	1	1
PTPRC	Amp_16p13.13	1	1
PTPRC	Amp_17q12	1	1
PTPRC	Amp_17q25.1	1	1
PTPRC	Amp_21q22.13	1	1
PTPRC	Amp_Xq28	1	1
PTPRC	Del_1p36.23	1	1
PTPRC	Del_1p13.2	1	1
PTPRC	Del_5q35.2	1	1
PTPRC	Del_6p24.2	1	1
PTPRC	Del_10q23.31	1	1
PTPRC	Del_11p15.1	1	1
PTPRC	Del_13q12.11	1	1
PTPRC	Del_13q14.2	1	1
PTPRC	Del_17q25.3	1	1
PTPRC	Del_19q13.33	1	1
PTPRC	Del_Xp11.3	1	1
PTPRC	Del_Xq21.33	1	1
RB1	STK11	1	1
RB1	BAP1	1	1
RB1	IDS	1	1
RB1	LIN9	1	1
RB1	8q-Amp	1	1
RB1	18q-Del	1	1
RB1	19p-Del	1	1
RB1	22q-Del	1	1
RB1	3q-Del	1	1
RB1	4q-Del	1	1
RB1	5q-Del	1	1
RB1	6q-Del	1	1
RB1	8p-Del	1	1
RB1	Xp-Del	1	1
RB1	Amp_2p24.3	1	1
RB1	Amp_2q33.1	1	1
RB1	Amp_6p21.33	1	1
RB1	Amp_7p11.2	1	1
RB1	Amp_11p12	1	1
RB1	Amp_11q13.3	1	1
RB1	Amp_11q22.1	1	1
RB1	Del_1p36.23	1	1
RB1	Del_1p13.2	1	1
RB1	Del_4q21.3	1	1
RB1	Del_4q22.1	1	1
RB1	Del_4q35.2	1	1
RB1	Del_8p23.3	1	1
RB1	Del_8p23.1	1	1
RB1	Del_15q21.1	1	1
RB1	Del_18q21.2	1	1
RB1	Del_19q13.33	1	1
RB1	Del_20p12.1	1	1
RB1	Del_Xp11.3	1	1
RB1	Del_Xq21.33	1	1
STK11	TP53	1	1
STK11	BAP1	1	1
STK11	C12orf43	1	1
STK11	FAT2	1	1
STK11	IDS	1	1
STK11	LIN9	1	1
STK11	MED1	1	1
STK11	RAB35	1	1
STK11	SMAD4	1	1
STK11	TCTE1	1	1
STK11	TRIM9	1	1
STK11	USP28	1	1
STK11	1p-Amp	1	1
STK11	20p-Amp	1	1
STK11	20q-Amp	1	1
STK11	3q-Amp	1	1
STK11	5p-Amp	1	1
STK11	8q-Amp	1	1
STK11	10q-Del	1	1
STK11	18q-Del	1	1
STK11	19p-Del	1	1
STK11	3q-Del	1	1
STK11	5q-Del	1	1
STK11	6q-Del	1	1
STK11	8p-Del	1	1
STK11	Xp-Del	1	1
STK11	Amp_1p31.3	1	1
STK11	Amp_2p24.3	1	1
STK11	Amp_2q33.1	1	1
STK11	Amp_3q26.31	1	1
STK11	Amp_3q28	1	1
STK11	Amp_6p21.33	1	1
STK11	Amp_7p11.2	1	1
STK11	Amp_8q24.21	1	1
STK11	Amp_9p24.1	1	1
STK11	Amp_11p12	1	1
STK11	Amp_11q13.3	1	1
STK11	Amp_11q22.1	1	1
STK11	Amp_13q22.1	1	1
STK11	Amp_13q34	1	1
STK11	Amp_16p13.13	1	1
STK11	Amp_17q12	1	1
STK11	Amp_17q25.1	1	1
STK11	Amp_19q13.13	1	1
STK11	Amp_20q11.21	1	1
STK11	Amp_21q22.13	1	1
STK11	Amp_Xq28	1	1
STK11	Del_1p36.23	1	1
STK11	Del_2q22.1	1	1
STK11	Del_5q12.1	1	1
STK11	Del_5q35.2	1	1
STK11	Del_6p24.2	1	1
STK11	Del_6q26	1	1
STK11	Del_8p23.3	1	1
STK11	Del_8p23.1	1	1
STK11	Del_14q32.31	1	1
STK11	Del_15q21.1	1	1
STK11	Del_16q11.2	1	1
STK11	Del_17q25.3	1	1
STK11	Del_18q21.2	1	1
STK11	Del_19q13.33	1	1
STK11	Del_20p12.1	1	1
STK11	Del_Xp11.3	1	1
STK11	Del_Xq21.33	1	1
TP53	BAP1	1	1
TP53	RAB35	1	1
TP53	10q-Del	1	1
TP53	13q-Del	1	1
TP53	19p-Del	1	1
TP53	3q-Del	1	1
TP53	5q-Del	1	1
TP53	Xp-Del	1	1
TP53	Amp_6p21.33	1	1
TP53	Amp_7p11.2	1	1
TP53	Amp_11p12	1	1
TP53	Amp_11q22.1	1	1
TP53	Amp_Xq28	1	1
TP53	Del_1p36.23	1	1
TP53	Del_1p13.2	1	1
TP53	Del_2q22.1	1	1
TP53	Del_5q12.1	1	1
TP53	Del_5q35.2	1	1
TP53	Del_7q34	1	1
TP53	Del_10q23.31	1	1
TP53	Del_13q14.2	1	1
TP53	Del_19q13.33	1	1
TP53	Del_Xp11.3	1	1
TP53	Del_Xq21.33	1	1
ZNF578	BAP1	1	1
ZNF578	C12orf43	1	1
ZNF578	NHS	1	1
ZNF578	RAB35	1	1
ZNF578	1p-Amp	1	1
ZNF578	20p-Amp	1	1
ZNF578	8q-Amp	1	1
ZNF578	10q-Del	1	1
ZNF578	11q-Del	1	1
ZNF578	13q-Del	1	1
ZNF578	18q-Del	1	1
ZNF578	19p-Del	1	1
ZNF578	22q-Del	1	1
ZNF578	3q-Del	1	1
ZNF578	4q-Del	1	1
ZNF578	5q-Del	1	1
ZNF578	Xp-Del	1	1
ZNF578	Amp_1p31.3	1	1
ZNF578	Amp_2q33.1	1	1
ZNF578	Amp_6p21.33	1	1
ZNF578	Amp_9p24.1	1	1
ZNF578	Amp_11q13.3	1	1
ZNF578	Amp_11q22.1	1	1
ZNF578	Amp_15q26.1	1	1
ZNF578	Amp_21q22.13	1	1
ZNF578	Amp_Xq28	1	1
ZNF578	Del_1p36.23	1	1
ZNF578	Del_1p13.2	1	1
ZNF578	Del_2q22.1	1	1
ZNF578	Del_4q21.3	1	1
ZNF578	Del_4q35.2	1	1
ZNF578	Del_10q23.31	1	1
ZNF578	Del_11q23.3	1	1
ZNF578	Del_11q25	1	1
ZNF578	Del_13q12.11	1	1
ZNF578	Del_13q14.2	1	1
ZNF578	Del_14q32.31	1	1
ZNF578	Del_16q23.1	1	1
ZNF578	Del_18q21.2	1	1
ZNF578	Del_19q13.33	1	1
ZNF578	Del_22q13.32	1	1
ZNF578	Del_Xp11.3	1	1
ZNF578	Del_Xq21.33	1	1
BAP1	C12orf43	1	1
BAP1	FAT2	1	1
BAP1	LIN9	1	1
BAP1	MED1	1	1
BAP1	NHS	1	1
BAP1	RAB35	1	1
BAP1	SEMA4B	1	1
BAP1	SMAD4	1	1
BAP1	TCTE1	1	1
BAP1	TRIM9	1	1
BAP1	USP28	1	1
BAP1	ZNF750	1	1
BAP1	1p-Amp	1	1
BAP1	1q-Amp	1	1
BAP1	20p-Amp	1	1
BAP1	20q-Amp	1	1
BAP1	5p-Amp	1	1
BAP1	8q-Amp	1	1
BAP1	11q-Del	1	1
BAP1	13q-Del	1	1
BAP1	18q-Del	1	1
BAP1	19p-Del	1	1
BAP1	22q-Del	1	1
BAP1	3q-Del	1	1
BAP1	4q-Del	1	1
BAP1	5q-Del	1	1
BAP1	8p-Del	1	1
BAP1	Xp-Del	1	1
BAP1	Amp_1p31.3	1	1
BAP1	Amp_1q21.3	1	1
BAP1	Amp_1q44	1	1
BAP1	Amp_2p24.3	1	1
BAP1	Amp_2q33.1	1	1
BAP1	Amp_5p15.33	1	1
BAP1	Amp_6p21.33	1	1
BAP1	Amp_8q24.21	1	1
BAP1	Amp_9p24.1	1	1
BAP1	Amp_11p12	1	1
BAP1	Amp_11q13.3	1	1
BAP1	Amp_11q22.1	1	1
BAP1	Amp_13q34	1	1
BAP1	Amp_15q26.1	1	1
BAP1	Amp_16p13.13	1	1
BAP1	Amp_17q12	1	1
BAP1	Amp_17q25.1	1	1
BAP1	Amp_19q13.13	1	1
BAP1	Amp_20q11.21	1	1
BAP1	Amp_21q22.13	1	1
BAP1	Amp_Xq28	1	1
BAP1	Del_1p36.23	1	1
BAP1	Del_1p13.2	1	1
BAP1	Del_4q21.3	1	1
BAP1	Del_4q22.1	1	1
BAP1	Del_5q12.1	1	1
BAP1	Del_5q35.2	1	1
BAP1	Del_7q34	1	1
BAP1	Del_8p23.3	1	1
BAP1	Del_8p23.1	1	1
BAP1	Del_13q14.2	1	1
BAP1	Del_14q32.31	1	1
BAP1	Del_15q21.1	1	1
BAP1	Del_16q11.2	1	1
BAP1	Del_16q23.1	1	1
BAP1	Del_17q25.3	1	1
BAP1	Del_18q21.2	1	1
BAP1	Del_19q13.33	1	1
BAP1	Del_20p12.1	1	1
BAP1	Del_22q13.32	1	1
BAP1	Del_Xp11.3	1	1
BAP1	Del_Xq21.33	1	1
C12orf43	IDS	1	1
C12orf43	LIN9	1	1
C12orf43	NHS	1	1
C12orf43	RAB35	1	1
C12orf43	SEMA4B	1	1
C12orf43	SMAD4	1	1
C12orf43	USP28	1	1
C12orf43	5p-Amp	1	1
C12orf43	10q-Del	1	1
C12orf43	11p-Del	1	1
C12orf43	11q-Del	1	1
C12orf43	13q-Del	1	1
C12orf43	19p-Del	1	1
C12orf43	22q-Del	1	1
C12orf43	3q-Del	1	1
C12orf43	4p-Del	1	1
C12orf43	5q-Del	1	1
C12orf43	8p-Del	1	1
C12orf43	Amp_6p21.33	1	1
C12orf43	Amp_7p11.2	1	1
C12orf43	Amp_9p24.1	1	1
C12orf43	Amp_11q13.3	1	1
C12orf43	Amp_11q22.1	1	1
C12orf43	Amp_15q26.1	1	1
C12orf43	Amp_17q12	1	1
C12orf43	Amp_17q25.1	1	1
C12orf43	Amp_19q13.13	1	1
C12orf43	Amp_21q22.13	1	1
C12orf43	Amp_Xq28	1	1
C12orf43	Del_1p36.23	1	1
C12orf43	Del_1p13.2	1	1
C12orf43	Del_2q22.1	1	1
C12orf43	Del_5q12.1	1	1
C12orf43	Del_5q35.2	1	1
C12orf43	Del_6p24.2	1	1
C12orf43	Del_10q23.31	1	1
C12orf43	Del_11p15.1	1	1
C12orf43	Del_14q32.31	1	1
C12orf43	Del_15q21.1	1	1
C12orf43	Del_17q25.3	1	1
C12orf43	Del_19q13.33	1	1
C12orf43	Del_22q13.32	1	1
C12orf43	Del_Xq21.33	1	1
FAT2	RAB35	1	1
FAT2	1p-Amp	1	1
FAT2	19p-Del	1	1
FAT2	3q-Del	1	1
FAT2	4p-Del	1	1
FAT2	5q-Del	1	1
FAT2	Xp-Del	1	1
FAT2	Amp_1p31.3	1	1
FAT2	Amp_6p21.33	1	1
FAT2	Amp_11p12	1	1
FAT2	Amp_17q12	1	1
FAT2	Amp_21q22.13	1	1
FAT2	Amp_Xq28	1	1
FAT2	Del_1p36.23	1	1
FAT2	Del_1p13.2	1	1
FAT2	Del_7q34	1	1
FAT2	Del_19q13.33	1	1
FAT2	Del_Xq21.33	1	1
IDS	MED1	1	1
IDS	RAB35	1	1
IDS	SMAD4	1	1
IDS	TCTE1	1	1
IDS	TRIM9	1	1
IDS	ZNF750	1	1
IDS	1p-Amp	1	1
IDS	1q-Amp	1	1
IDS	8q-Amp	1	1
IDS	10q-Del	1	1
IDS	13q-Del	1	1
IDS	19p-Del	1	1
IDS	22q-Del	1	1
IDS	3q-Del	1	1
IDS	4q-Del	1	1
IDS	5q-Del	1	1
IDS	Xp-Del	1	1
IDS	Amp_1p31.3	1	1
IDS	Amp_1q21.3	1	1
IDS	Amp_1q44	1	1
IDS	Amp_2p24.3	1	1
IDS	Amp_6p21.33	1	1
IDS	Amp_11p12	1	1
IDS	Amp_11q13.3	1	1
IDS	Amp_11q22.1	1	1
IDS	Amp_15q26.1	1	1
IDS	Amp_16p13.13	1	1
IDS	Amp_17q12	1	1
IDS	Amp_17q25.1	1	1
IDS	Amp_21q22.13	1	1
IDS	Amp_Xq28	1	1
IDS	Del_2q22.1	1	1
IDS	Del_5q12.1	1	1
IDS	Del_5q35.2	1	1
IDS	Del_7q34	1	1
IDS	Del_10q23.31	1	1
IDS	Del_13q14.2	1	1
IDS	Del_19q13.33	1	1
IDS	Del_22q13.32	1	1
IDS	Del_Xp11.3	1	1
IDS	Del_Xq21.33	1	1
LIN9	NHS	1	1
LIN9	RAB35	1	1
LIN9	TCTE1	1	1
LIN9	TRIM9	1	1
LIN9	ZNF750	1	1
LIN9	8q-Amp	1	1
LIN9	10q-Del	1	1
LIN9	13q-Del	1	1
LIN9	18q-Del	1	1
LIN9	19p-Del	1	1
LIN9	22q-Del	1	1
LIN9	3p-Del	1	1
LIN9	3q-Del	1	1
LIN9	4q-Del	1	1
LIN9	5q-Del	1	1
LIN9	6q-Del	1	1
LIN9	Xp-Del	1	1
LIN9	Amp_1p31.3	1	1
LIN9	Amp_2q33.1	1	1
LIN9	Amp_7p11.2	1	1
LIN9	Amp_11p12	1	1
LIN9	Amp_15q26.1	1	1
LIN9	Amp_21q22.13	1	1
LIN9	Del_1p13.2	1	1
LIN9	Del_2q22.1	1	1
LIN9	Del_4q21.3	1	1
LIN9	Del_5q12.1	1	1
LIN9	Del_5q35.2	1	1
LIN9	Del_6q26	1	1
LIN9	Del_10q23.31	1	1
LIN9	Del_13q12.11	1	1
LIN9	Del_13q14.2	1	1
LIN9	Del_16q23.1	1	1
LIN9	Del_18q21.2	1	1
LIN9	Del_19q13.33	1	1
LIN9	Del_22q13.32	1	1
LIN9	Del_Xp11.3	1	1
LIN9	Del_Xq21.33	1	1
MED1	RAB35	1	1
MED1	SEMA4B	1	1
MED1	10q-Del	1	1
MED1	11p-Del	1	1
MED1	11q-Del	1	1
MED1	18q-Del	1	1
MED1	22q-Del	1	1
MED1	3q-Del	1	1
MED1	4q-Del	1	1
MED1	6q-Del	1	1
MED1	8p-Del	1	1
MED1	Xp-Del	1	1
MED1	Amp_11p12	1	1
MED1	Amp_11q13.3	1	1
MED1	Amp_15q26.1	1	1
MED1	Amp_16p13.13	1	1
MED1	Del_1p36.23	1	1
MED1	Del_1p13.2	1	1
MED1	Del_4q21.3	1	1
MED1	Del_4q22.1	1	1
MED1	Del_8p23.3	1	1
MED1	Del_8p23.1	1	1
MED1	Del_10q23.31	1	1
MED1	Del_11p15.1	1	1
MED1	Del_16q11.2	1	1
MED1	Del_16q23.1	1	1
MED1	Del_18q21.2	1	1
MED1	Del_19q13.33	1	1
MED1	Del_20p12.1	1	1
MED1	Del_22q13.32	1	1
MED1	Del_Xp11.3	1	1
MED1	Del_Xq21.33	1	1
NHS	RAB35	1	1
NHS	TCTE1	1	1
NHS	1p-Amp	1	1
NHS	1q-Amp	1	1
NHS	19p-Del	1	1
NHS	3q-Del	1	1
NHS	5q-Del	1	1
NHS	6q-Del	1	1
NHS	Xp-Del	1	1
NHS	Amp_1p31.3	1	1
NHS	Amp_1q44	1	1
NHS	Amp_11p12	1	1
NHS	Amp_13q22.1	1	1
NHS	Amp_13q34	1	1
NHS	Amp_21q22.13	1	1
NHS	Amp_Xq28	1	1
NHS	Del_1p36.23	1	1
NHS	Del_1p13.2	1	1
NHS	Del_5q12.1	1	1
NHS	Del_7q34	1	1
NHS	Del_19q13.33	1	1
NHS	Del_Xq21.33	1	1
RAB35	SEMA4B	1	1
RAB35	SMAD4	1	1
RAB35	TCTE1	1	1
RAB35	TRIM9	1	1
RAB35	USP28	1	1
RAB35	20p-Amp	1	1
RAB35	20q-Amp	1	1
RAB35	8q-Amp	1	1
RAB35	10q-Del	1	1
RAB35	13q-Del	1	1
RAB35	18q-Del	1	1
RAB35	19p-Del	1	1
RAB35	22q-Del	1	1
RAB35	3q-Del	1	1
RAB35	4p-Del	1	1
RAB35	4q-Del	1	1
RAB35	5q-Del	1	1
RAB35	6q-Del	1	1
RAB35	Xp-Del	1	1
RAB35	Amp_2p24.3	1	1
RAB35	Amp_2q33.1	1	1
RAB35	Amp_6p21.33	1	1
RAB35	Amp_7p11.2	1	1
RAB35	Amp_8q24.21	1	1
RAB35	Amp_11p12	1	1
RAB35	Amp_11q13.3	1	1
RAB35	Amp_11q22.1	1	1
RAB35	Amp_13q22.1	1	1
RAB35	Amp_13q34	1	1
RAB35	Amp_15q26.1	1	1
RAB35	Amp_16p13.13	1	1
RAB35	Amp_17q12	1	1
RAB35	Amp_17q25.1	1	1
RAB35	Amp_19q13.13	1	1
RAB35	Amp_21q22.13	1	1
RAB35	Amp_Xq28	1	1
RAB35	Del_1p36.23	1	1
RAB35	Del_1p13.2	1	1
RAB35	Del_4q21.3	1	1
RAB35	Del_4q22.1	1	1
RAB35	Del_4q35.2	1	1
RAB35	Del_5q12.1	1	1
RAB35	Del_5q35.2	1	1
RAB35	Del_6p24.2	1	1
RAB35	Del_6q26	1	1
RAB35	Del_7q34	1	1
RAB35	Del_10q23.31	1	1
RAB35	Del_13q12.11	1	1
RAB35	Del_13q14.2	1	1
RAB35	Del_14q32.31	1	1
RAB35	Del_15q21.1	1	1
RAB35	Del_16q11.2	1	1
RAB35	Del_16q23.1	1	1
RAB35	Del_18q21.2	1	1
RAB35	Del_19q13.33	1	1
RAB35	Del_20p12.1	1	1
RAB35	Del_22q13.32	1	1
RAB35	Del_Xp11.3	1	1
RAB35	Del_Xq21.33	1	1
SEMA4B	SMAD4	1	1
SEMA4B	TCTE1	1	1
SEMA4B	TRIM9	1	1
SEMA4B	1p-Amp	1	1
SEMA4B	1q-Amp	1	1
SEMA4B	3q-Amp	1	1
SEMA4B	13q-Del	1	1
SEMA4B	18q-Del	1	1
SEMA4B	19p-Del	1	1
SEMA4B	3q-Del	1	1
SEMA4B	6q-Del	1	1
SEMA4B	Xp-Del	1	1
SEMA4B	Amp_1p31.3	1	1
SEMA4B	Amp_2q33.1	1	1
SEMA4B	Amp_6p21.33	1	1
SEMA4B	Amp_11p12	1	1
SEMA4B	Amp_15q26.1	1	1
SEMA4B	Amp_17q12	1	1
SEMA4B	Amp_17q25.1	1	1
SEMA4B	Amp_21q22.13	1	1
SEMA4B	Amp_Xq28	1	1
SEMA4B	Del_1p36.23	1	1
SEMA4B	Del_2q22.1	1	1
SEMA4B	Del_4q35.2	1	1
SEMA4B	Del_5q35.2	1	1
SEMA4B	Del_6q26	1	1
SEMA4B	Del_14q32.31	1	1
SEMA4B	Del_16q23.1	1	1
SEMA4B	Del_18q21.2	1	1
SEMA4B	Del_19q13.33	1	1
SMAD4	1p-Amp	1	1
SMAD4	8q-Amp	1	1
SMAD4	10q-Del	1	1
SMAD4	11p-Del	1	1
SMAD4	11q-Del	1	1
SMAD4	13q-Del	1	1
SMAD4	17p-Del	1	1
SMAD4	19p-Del	1	1
SMAD4	3p-Del	1	1
SMAD4	3q-Del	1	1
SMAD4	5q-Del	1	1
SMAD4	6q-Del	1	1
SMAD4	Xp-Del	1	1
SMAD4	Amp_1p31.3	1	1
SMAD4	Amp_2q33.1	1	1
SMAD4	Amp_6p21.33	1	1
SMAD4	Amp_7p11.2	1	1
SMAD4	Amp_9p24.1	1	1
SMAD4	Amp_11p12	1	1
SMAD4	Amp_13q22.1	1	1
SMAD4	Amp_13q34	1	1
SMAD4	Amp_16p13.13	1	1
SMAD4	Amp_21q22.13	1	1
SMAD4	Amp_Xq28	1	1
SMAD4	Del_1p36.23	1	1
SMAD4	Del_1p13.2	1	1
SMAD4	Del_2q22.1	1	1
SMAD4	Del_2q37.1	1	1
SMAD4	Del_3p14.2	1	1
SMAD4	Del_4q21.3	1	1
SMAD4	Del_4q22.1	1	1
SMAD4	Del_6p24.2	1	1
SMAD4	Del_10q23.31	1	1
SMAD4	Del_11p15.1	1	1
SMAD4	Del_11q23.3	1	1
SMAD4	Del_11q25	1	1
SMAD4	Del_13q14.2	1	1
SMAD4	Del_17p12	1	1
SMAD4	Del_19q13.33	1	1
SMAD4	Del_20p12.1	1	1
SMAD4	Del_Xp11.3	1	1
SMAD4	Del_Xq21.33	1	1
TCTE1	USP28	1	1
TCTE1	8q-Amp	1	1
TCTE1	10q-Del	1	1
TCTE1	11p-Del	1	1
TCTE1	11q-Del	1	1
TCTE1	13q-Del	1	1
TCTE1	19p-Del	1	1
TCTE1	22q-Del	1	1
TCTE1	3q-Del	1	1
TCTE1	4p-Del	1	1
TCTE1	4q-Del	1	1
TCTE1	6q-Del	1	1
TCTE1	Xp-Del	1	1
TCTE1	Amp_2p24.3	1	1
TCTE1	Amp_2q33.1	1	1
TCTE1	Amp_6p21.33	1	1
TCTE1	Amp_7p11.2	1	1
TCTE1	Amp_8q24.21	1	1
TCTE1	Amp_9p24.1	1	1
TCTE1	Amp_11p12	1	1
TCTE1	Amp_15q26.1	1	1
TCTE1	Amp_17q12	1	1
TCTE1	Amp_21q22.13	1	1
TCTE1	Del_1p36.23	1	1
TCTE1	Del_1p13.2	1	1
TCTE1	Del_2q37.1	1	1
TCTE1	Del_4q21.3	1	1
TCTE1	Del_4q22.1	1	1
TCTE1	Del_6p24.2	1	1
TCTE1	Del_6q26	1	1
TCTE1	Del_7q34	1	1
TCTE1	Del_11p15.1	1	1
TCTE1	Del_13q12.11	1	1
TCTE1	Del_13q14.2	1	1
TCTE1	Del_14q32.31	1	1
TCTE1	Del_16q11.2	1	1
TCTE1	Del_16q23.1	1	1
TCTE1	Del_19q13.33	1	1
TCTE1	Del_20p12.1	1	1
TCTE1	Del_Xp11.3	1	1
TCTE1	Del_Xq21.33	1	1
TRIM9	8q-Amp	1	1
TRIM9	10q-Del	1	1
TRIM9	11p-Del	1	1
TRIM9	19p-Del	1	1
TRIM9	3p-Del	1	1
TRIM9	3q-Del	1	1
TRIM9	4q-Del	1	1
TRIM9	5q-Del	1	1
TRIM9	6q-Del	1	1
TRIM9	Xp-Del	1	1
TRIM9	Amp_7p11.2	1	1
TRIM9	Amp_11p12	1	1
TRIM9	Amp_11q22.1	1	1
TRIM9	Amp_17q12	1	1
TRIM9	Amp_17q25.1	1	1
TRIM9	Amp_19q13.13	1	1
TRIM9	Amp_21q22.13	1	1
TRIM9	Amp_Xq28	1	1
TRIM9	Del_2q22.1	1	1
TRIM9	Del_5q12.1	1	1
TRIM9	Del_5q35.2	1	1
TRIM9	Del_6p24.2	1	1
TRIM9	Del_10q23.31	1	1
TRIM9	Del_11p15.1	1	1
TRIM9	Del_13q12.11	1	1
TRIM9	Del_13q14.2	1	1
TRIM9	Del_19q13.33	1	1
TRIM9	Del_20p12.1	1	1
TRIM9	Del_Xp11.3	1	1
TRIM9	Del_Xq21.33	1	1
USP28	1p-Amp	1	1
USP28	1q-Amp	1	1
USP28	20p-Amp	1	1
USP28	20q-Amp	1	1
USP28	11q-Del	1	1
USP28	19p-Del	1	1
USP28	3q-Del	1	1
USP28	4p-Del	1	1
USP28	4q-Del	1	1
USP28	6q-Del	1	1
USP28	Xp-Del	1	1
USP28	Amp_1p31.3	1	1
USP28	Amp_2q33.1	1	1
USP28	Amp_7p11.2	1	1
USP28	Amp_11p12	1	1
USP28	Amp_11q22.1	1	1
USP28	Amp_16p13.13	1	1
USP28	Amp_17q25.1	1	1
USP28	Amp_20q11.21	1	1
USP28	Amp_21q22.13	1	1
USP28	Amp_Xq28	1	1
USP28	Del_1p36.23	1	1
USP28	Del_1p13.2	1	1
USP28	Del_2q22.1	1	1
USP28	Del_4q21.3	1	1
USP28	Del_7q34	1	1
USP28	Del_11q23.3	1	1
USP28	Del_11q25	1	1
USP28	Del_19q13.33	1	1
USP28	Del_Xp11.3	1	1
USP28	Del_Xq21.33	1	1
ZNF750	20p-Amp	1	1
ZNF750	20q-Amp	1	1
ZNF750	8q-Amp	1	1
ZNF750	18q-Del	1	1
ZNF750	19p-Del	1	1
ZNF750	22q-Del	1	1
ZNF750	3p-Del	1	1
ZNF750	3q-Del	1	1
ZNF750	4q-Del	1	1
ZNF750	5q-Del	1	1
ZNF750	6q-Del	1	1
ZNF750	Xp-Del	1	1
ZNF750	Amp_2p24.3	1	1
ZNF750	Amp_6p21.33	1	1
ZNF750	Amp_7p11.2	1	1
ZNF750	Amp_11p12	1	1
ZNF750	Amp_11q13.3	1	1
ZNF750	Amp_11q22.1	1	1
ZNF750	Amp_13q22.1	1	1
ZNF750	Amp_13q34	1	1
ZNF750	Amp_Xq28	1	1
ZNF750	Del_1p36.23	1	1
ZNF750	Del_1p13.2	1	1
ZNF750	Del_2q22.1	1	1
ZNF750	Del_4q21.3	1	1
ZNF750	Del_4q22.1	1	1
ZNF750	Del_4q35.2	1	1
ZNF750	Del_5q12.1	1	1
ZNF750	Del_6q26	1	1
ZNF750	Del_7q34	1	1
ZNF750	Del_15q21.1	1	1
ZNF750	Del_16q11.2	1	1
ZNF750	Del_18q21.2	1	1
ZNF750	Del_19q13.33	1	1
ZNF750	Del_20p12.1	1	1
ZNF750	Del_22q13.32	1	1
ZNF750	Del_Xp11.3	1	1
ZNF750	Del_Xq21.33	1	1
1p-Amp	11q-Del	1	1
1p-Amp	13q-Del	1	1
1p-Amp	18q-Del	1	1
1p-Amp	19p-Del	1	1
1p-Amp	22q-Del	1	1
1p-Amp	3p-Del	1	1
1p-Amp	3q-Del	1	1
1p-Amp	4q-Del	1	1
1p-Amp	5q-Del	1	1
1p-Amp	6q-Del	1	1
1p-Amp	Xp-Del	1	1
1p-Amp	Amp_7p11.2	1	1
1p-Amp	Amp_11p12	1	1
1p-Amp	Amp_11q13.3	1	1
1p-Amp	Del_1p36.23	1	1
1p-Amp	Del_1p13.2	1	1
1p-Amp	Del_2q22.1	1	1
1p-Amp	Del_4q21.3	1	1
1p-Amp	Del_4q22.1	1	1
1p-Amp	Del_4q35.2	1	1
1p-Amp	Del_5q35.2	1	1
1p-Amp	Del_13q12.11	1	1
1p-Amp	Del_13q14.2	1	1
1p-Amp	Del_16q11.2	1	1
1p-Amp	Del_18q21.2	1	1
1p-Amp	Del_20p12.1	1	1
1p-Amp	Del_22q13.32	1	1
1p-Amp	Del_Xq21.33	1	1
1q-Amp	19p-Del	1	1
1q-Amp	22q-Del	1	1
1q-Amp	Xp-Del	1	1
1q-Amp	Del_Xq21.33	1	1
20p-Amp	22q-Del	1	1
20p-Amp	Xp-Del	1	1
20p-Amp	Amp_6p21.33	1	1
20p-Amp	Amp_11q22.1	1	1
20p-Amp	Del_17q25.3	1	1
20p-Amp	Del_20p12.1	1	1
20p-Amp	Del_Xq21.33	1	1
20q-Amp	22q-Del	1	1
20q-Amp	Del_Xq21.33	1	1
3q-Amp	3q-Del	1	1
3q-Amp	Xp-Del	1	1
5p-Amp	3q-Del	1	1
5p-Amp	Del_1p13.2	1	1
5p-Amp	Del_Xq21.33	1	1
8q-Amp	22q-Del	1	1
8q-Amp	3q-Del	1	1
8q-Amp	Amp_11q13.3	1	1
8q-Amp	Del_1p13.2	1	1
8q-Amp	Del_14q32.31	1	1
8q-Amp	Del_Xq21.33	1	1
10q-Del	19p-Del	1	1
10q-Del	3q-Del	1	1
10q-Del	Xp-Del	1	1
10q-Del	Amp_1p31.3	1	1
10q-Del	Amp_2q33.1	1	1
10q-Del	Amp_11p12	1	1
10q-Del	Amp_13q22.1	1	1
10q-Del	Amp_13q34	1	1
10q-Del	Amp_15q26.1	1	1
10q-Del	Amp_16p13.13	1	1
10q-Del	Del_1p13.2	1	1
10q-Del	Del_2q22.1	1	1
10q-Del	Del_Xp11.3	1	1
11p-Del	Xp-Del	1	1
11p-Del	Del_Xp11.3	1	1
11p-Del	Del_Xq21.33	1	1
11q-Del	Xp-Del	1	1
11q-Del	Amp_13q22.1	1	1
11q-Del	Del_Xp11.3	1	1
11q-Del	Del_Xq21.33	1	1
13q-Del	22q-Del	1	1
13q-Del	3q-Del	1	1
13q-Del	Xp-Del	1	1
13q-Del	Amp_1p31.3	1	1
13q-Del	Amp_2p24.3	1	1
13q-Del	Amp_2q33.1	1	1
13q-Del	Amp_11p12	1	1
13q-Del	Del_1p36.23	1	1
13q-Del	Del_14q32.31	1	1
13q-Del	Del_19q13.33	1	1
13q-Del	Del_22q13.32	1	1
13q-Del	Del_Xq21.33	1	1
17p-Del	Amp_1p31.3	1	1
17p-Del	Del_1p36.23	1	1
18q-Del	3q-Del	1	1
18q-Del	Amp_1p31.3	1	1
18q-Del	Del_Xq21.33	1	1
19p-Del	22q-Del	1	1
19p-Del	6q-Del	1	1
19p-Del	Xp-Del	1	1
19p-Del	Amp_1p31.3	1	1
19p-Del	Amp_9p24.1	1	1
19p-Del	Amp_11p12	1	1
19p-Del	Amp_13q34	1	1
19p-Del	Amp_17q12	1	1
19p-Del	Amp_17q25.1	1	1
19p-Del	Amp_Xq28	1	1
19p-Del	Del_1p36.23	1	1
19p-Del	Del_2q22.1	1	1
19p-Del	Del_7q34	1	1
19p-Del	Del_10q23.31	1	1
19p-Del	Del_15q21.1	1	1
19p-Del	Del_16q11.2	1	1
19p-Del	Del_16q23.1	1	1
19p-Del	Del_17q25.3	1	1
19p-Del	Del_19q13.33	1	1
19p-Del	Del_22q13.32	1	1
19p-Del	Del_Xp11.3	1	1
19p-Del	Del_Xq21.33	1	1
22q-Del	3q-Del	1	1
22q-Del	5q-Del	1	1
22q-Del	6q-Del	1	1
22q-Del	Xp-Del	1	1
22q-Del	Amp_1p31.3	1	1
22q-Del	Amp_2q33.1	1	1
22q-Del	Amp_6p21.33	1	1
22q-Del	Amp_7p11.2	1	1
22q-Del	Amp_11p12	1	1
22q-Del	Amp_11q22.1	1	1
22q-Del	Amp_13q22.1	1	1
22q-Del	Amp_17q12	1	1
22q-Del	Amp_17q25.1	1	1
22q-Del	Amp_21q22.13	1	1
22q-Del	Amp_Xq28	1	1
22q-Del	Del_2q22.1	1	1
22q-Del	Del_5q12.1	1	1
22q-Del	Del_5q35.2	1	1
22q-Del	Del_13q12.11	1	1
22q-Del	Del_13q14.2	1	1
22q-Del	Del_17q25.3	1	1
22q-Del	Del_Xp11.3	1	1
22q-Del	Del_Xq21.33	1	1
3p-Del	Xp-Del	1	1
3p-Del	Amp_1p31.3	1	1
3p-Del	Del_14q32.31	1	1
3q-Del	6q-Del	1	1
3q-Del	Xp-Del	1	1
3q-Del	Amp_1p31.3	1	1
3q-Del	Amp_6p21.33	1	1
3q-Del	Amp_7p11.2	1	1
3q-Del	Amp_9p24.1	1	1
3q-Del	Amp_11p12	1	1
3q-Del	Amp_11q13.3	1	1
3q-Del	Amp_11q22.1	1	1
3q-Del	Amp_13q22.1	1	1
3q-Del	Amp_16p13.13	1	1
3q-Del	Amp_17q12	1	1
3q-Del	Amp_21q22.13	1	1
3q-Del	Amp_Xq28	1	1
3q-Del	Del_1p36.23	1	1
3q-Del	Del_2q22.1	1	1
3q-Del	Del_2q37.1	1	1
3q-Del	Del_6p24.2	1	1
3q-Del	Del_7q34	1	1
3q-Del	Del_10q23.31	1	1
3q-Del	Del_14q32.31	1	1
3q-Del	Del_15q21.1	1	1
3q-Del	Del_16q11.2	1	1
3q-Del	Del_16q23.1	1	1
3q-Del	Del_17q25.3	1	1
3q-Del	Del_18q21.2	1	1
3q-Del	Del_19q13.33	1	1
3q-Del	Del_20p12.1	1	1
3q-Del	Del_22q13.32	1	1
3q-Del	Del_Xp11.3	1	1
3q-Del	Del_Xq21.33	1	1
4p-Del	Xp-Del	1	1
4p-Del	Amp_13q34	1	1
4p-Del	Amp_16p13.13	1	1
4p-Del	Amp_Xq28	1	1
4q-Del	Amp_1p31.3	1	1
4q-Del	Amp_16p13.13	1	1
4q-Del	Amp_17q25.1	1	1
4q-Del	Amp_Xq28	1	1
4q-Del	Del_1p13.2	1	1
4q-Del	Del_6p24.2	1	1
4q-Del	Del_Xq21.33	1	1
5q-Del	Xp-Del	1	1
5q-Del	Amp_1p31.3	1	1
5q-Del	Amp_2q33.1	1	1
5q-Del	Amp_16p13.13	1	1
5q-Del	Del_14q32.31	1	1
5q-Del	Del_16q23.1	1	1
6q-Del	Xp-Del	1	1
6q-Del	Amp_1p31.3	1	1
6q-Del	Amp_6p21.33	1	1
6q-Del	Amp_9p24.1	1	1
6q-Del	Amp_11q22.1	1	1
6q-Del	Amp_17q25.1	1	1
6q-Del	Del_15q21.1	1	1
6q-Del	Del_19q13.33	1	1
6q-Del	Del_Xp11.3	1	1
6q-Del	Del_Xq21.33	1	1
8p-Del	Xp-Del	1	1
8p-Del	Amp_11p12	1	1
Xp-Del	Amp_1p31.3	1	1
Xp-Del	Amp_1q44	1	1
Xp-Del	Amp_2p24.3	1	1
Xp-Del	Amp_6p21.33	1	1
Xp-Del	Amp_7p11.2	1	1
Xp-Del	Amp_9p24.1	1	1
Xp-Del	Amp_11q13.3	1	1
Xp-Del	Amp_11q22.1	1	1
Xp-Del	Amp_15q26.1	1	1
Xp-Del	Amp_16p13.13	1	1
Xp-Del	Amp_17q12	1	1
Xp-Del	Amp_17q25.1	1	1
Xp-Del	Amp_19q13.13	1	1
Xp-Del	Amp_21q22.13	1	1
Xp-Del	Del_1p36.23	1	1
Xp-Del	Del_1p13.2	1	1
Xp-Del	Del_2q22.1	1	1
Xp-Del	Del_4q21.3	1	1
Xp-Del	Del_5q12.1	1	1
Xp-Del	Del_5q35.2	1	1
Xp-Del	Del_6p24.2	1	1
Xp-Del	Del_6q26	1	1
Xp-Del	Del_10q23.31	1	1
Xp-Del	Del_11p15.1	1	1
Xp-Del	Del_11q23.3	1	1
Xp-Del	Del_11q25	1	1
Xp-Del	Del_14q32.31	1	1
Xp-Del	Del_15q21.1	1	1
Xp-Del	Del_16q11.2	1	1
Xp-Del	Del_16q23.1	1	1
Xp-Del	Del_17q25.3	1	1
Xp-Del	Del_19q13.33	1	1
Xp-Del	Del_22q13.32	1	1
Xp-Del	Del_Xq21.33	1	1
Amp_1p31.3	Amp_17q12	1	1
Amp_1p31.3	Del_1p36.23	1	1
Amp_1p31.3	Del_1p13.2	1	1
Amp_1p31.3	Del_2q22.1	1	1
Amp_1p31.3	Del_4q21.3	1	1
Amp_1p31.3	Del_4q22.1	1	1
Amp_1p31.3	Del_4q35.2	1	1
Amp_1p31.3	Del_5q12.1	1	1
Amp_1p31.3	Del_5q35.2	1	1
Amp_1p31.3	Del_6p24.2	1	1
Amp_1p31.3	Del_7q34	1	1
Amp_1p31.3	Del_10q23.31	1	1
Amp_1p31.3	Del_13q12.11	1	1
Amp_1p31.3	Del_13q14.2	1	1
Amp_1p31.3	Del_15q21.1	1	1
Amp_1p31.3	Del_16q11.2	1	1
Amp_1p31.3	Del_16q23.1	1	1
Amp_1p31.3	Del_18q21.2	1	1
Amp_1p31.3	Del_20p12.1	1	1
Amp_1p31.3	Del_22q13.32	1	1
Amp_1p31.3	Del_Xq21.33	1	1
Amp_1q21.3	Del_Xq21.33	1	1
Amp_1q44	Del_Xq21.33	1	1
Amp_2p24.3	Del_1p13.2	1	1
Amp_2p24.3	Del_19q13.33	1	1
Amp_2q33.1	Amp_6p21.33	1	1
Amp_2q33.1	Amp_17q12	1	1
Amp_2q33.1	Amp_17q25.1	1	1
Amp_2q33.1	Del_5q12.1	1	1
Amp_2q33.1	Del_5q35.2	1	1
Amp_2q33.1	Del_10q23.31	1	1
Amp_2q33.1	Del_15q21.1	1	1
Amp_2q33.1	Del_19q13.33	1	1
Amp_2q33.1	Del_Xq21.33	1	1
Amp_5p15.33	Del_Xq21.33	1	1
Amp_6p21.33	Amp_11p12	1	1
Amp_6p21.33	Del_2q22.1	1	1
Amp_6p21.33	Del_16q11.2	1	1
Amp_6p21.33	Del_17q25.3	1	1
Amp_6p21.33	Del_20p12.1	1	1
Amp_6p21.33	Del_Xp11.3	1	1
Amp_6p21.33	Del_Xq21.33	1	1
Amp_7p11.2	Amp_15q26.1	1	1
Amp_7p11.2	Amp_21q22.13	1	1
Amp_7p11.2	Amp_Xq28	1	1
Amp_7p11.2	Del_2q22.1	1	1
Amp_7p11.2	Del_16q23.1	1	1
Amp_7p11.2	Del_20p12.1	1	1
Amp_7p11.2	Del_22q13.32	1	1
Amp_8q24.21	Del_Xq21.33	1	1
Amp_9p24.1	Amp_11p12	1	1
Amp_9p24.1	Amp_11q13.3	1	1
Amp_9p24.1	Amp_Xq28	1	1
Amp_9p24.1	Del_1p36.23	1	1
Amp_9p24.1	Del_1p13.2	1	1
Amp_9p24.1	Del_19q13.33	1	1
Amp_9p24.1	Del_20p12.1	1	1
Amp_9p24.1	Del_Xq21.33	1	1
Amp_11p12	Amp_11q13.3	1	1
Amp_11p12	Amp_15q26.1	1	1
Amp_11p12	Amp_17q12	1	1
Amp_11p12	Amp_19q13.13	1	1
Amp_11p12	Amp_Xq28	1	1
Amp_11p12	Del_1p36.23	1	1
Amp_11p12	Del_1p13.2	1	1
Amp_11p12	Del_10q23.31	1	1
Amp_11p12	Del_14q32.31	1	1
Amp_11p12	Del_15q21.1	1	1
Amp_11p12	Del_16q11.2	1	1
Amp_11p12	Del_16q23.1	1	1
Amp_11p12	Del_Xq21.33	1	1
Amp_11q13.3	Amp_17q12	1	1
Amp_11q13.3	Del_Xp11.3	1	1
Amp_11q13.3	Del_Xq21.33	1	1
Amp_11q22.1	Amp_17q12	1	1
Amp_11q22.1	Del_6q26	1	1
Amp_11q22.1	Del_16q23.1	1	1
Amp_11q22.1	Del_19q13.33	1	1
Amp_11q22.1	Del_22q13.32	1	1
Amp_13q22.1	Del_1p36.23	1	1
Amp_13q22.1	Del_10q23.31	1	1
Amp_13q22.1	Del_19q13.33	1	1
Amp_13q22.1	Del_22q13.32	1	1
Amp_13q22.1	Del_Xq21.33	1	1
Amp_13q34	Del_1p36.23	1	1
Amp_13q34	Del_4q21.3	1	1
Amp_13q34	Del_10q23.31	1	1
Amp_13q34	Del_Xq21.33	1	1
Amp_15q26.1	Amp_17q12	1	1
Amp_15q26.1	Del_1p36.23	1	1
Amp_15q26.1	Del_1p13.2	1	1
Amp_15q26.1	Del_10q23.31	1	1
Amp_15q26.1	Del_19q13.33	1	1
Amp_15q26.1	Del_20p12.1	1	1
Amp_15q26.1	Del_Xp11.3	1	1
Amp_15q26.1	Del_Xq21.33	1	1
Amp_16p13.13	Del_1p13.2	1	1
Amp_16p13.13	Del_2q22.1	1	1
Amp_16p13.13	Del_4q21.3	1	1
Amp_16p13.13	Del_4q22.1	1	1
Amp_16p13.13	Del_5q12.1	1	1
Amp_16p13.13	Del_7q34	1	1
Amp_16p13.13	Del_Xp11.3	1	1
Amp_17q12	Amp_21q22.13	1	1
Amp_17q12	Del_1p13.2	1	1
Amp_17q12	Del_20p12.1	1	1
Amp_17q12	Del_22q13.32	1	1
Amp_17q12	Del_Xq21.33	1	1
Amp_17q25.1	Del_1p36.23	1	1
Amp_17q25.1	Del_1p13.2	1	1
Amp_17q25.1	Del_4q22.1	1	1
Amp_17q25.1	Del_16q11.2	1	1
Amp_19q13.13	Del_Xq21.33	1	1
Amp_21q22.13	Del_1p13.2	1	1
Amp_21q22.13	Del_6p24.2	1	1
Amp_21q22.13	Del_16q23.1	1	1
Amp_21q22.13	Del_22q13.32	1	1
Amp_21q22.13	Del_Xq21.33	1	1
Amp_Xq28	Del_1p13.2	1	1
Amp_Xq28	Del_4q21.3	1	1
Amp_Xq28	Del_4q22.1	1	1
Amp_Xq28	Del_4q35.2	1	1
Amp_Xq28	Del_20p12.1	1	1
Amp_Xq28	Del_22q13.32	1	1
Amp_Xq28	Del_Xq21.33	1	1
Del_1p36.23	Del_6p24.2	1	1
Del_1p36.23	Del_Xq21.33	1	1
Del_1p13.2	Del_4q35.2	1	1
Del_1p13.2	Del_6p24.2	1	1
Del_1p13.2	Del_7q34	1	1
Del_1p13.2	Del_17q25.3	1	1
Del_1p13.2	Del_19q13.33	1	1
Del_1p13.2	Del_20p12.1	1	1
Del_1p13.2	Del_Xp11.3	1	1
Del_1p13.2	Del_Xq21.33	1	1
Del_2q22.1	Del_14q32.31	1	1
Del_2q22.1	Del_22q13.32	1	1
Del_2q22.1	Del_Xq21.33	1	1
Del_2q37.1	Del_Xq21.33	1	1
Del_4q21.3	Del_6p24.2	1	1
Del_4q21.3	Del_22q13.32	1	1
Del_4q21.3	Del_Xq21.33	1	1
Del_4q22.1	Del_6p24.2	1	1
Del_4q22.1	Del_22q13.32	1	1
Del_4q22.1	Del_Xq21.33	1	1
Del_4q35.2	Del_Xq21.33	1	1
Del_5q12.1	Del_14q32.31	1	1
Del_5q35.2	Del_16q23.1	1	1
Del_6p24.2	Del_19q13.33	1	1
Del_6q26	Del_19q13.33	1	1
Del_6q26	Del_Xp11.3	1	1
Del_6q26	Del_Xq21.33	1	1
Del_7q34	Del_Xq21.33	1	1
Del_10q23.31	Del_Xp11.3	1	1
Del_13q12.11	Del_22q13.32	1	1
Del_13q12.11	Del_Xq21.33	1	1
Del_14q32.31	Del_17q25.3	1	1
Del_14q32.31	Del_20p12.1	1	1
Del_14q32.31	Del_Xp11.3	1	1
Del_14q32.31	Del_Xq21.33	1	1
Del_15q21.1	Del_Xp11.3	1	1
Del_16q11.2	Del_Xq21.33	1	1
Del_16q23.1	Del_19q13.33	1	1
Del_16q23.1	Del_Xq21.33	1	1
Del_18q21.2	Del_Xq21.33	1	1
Del_19q13.33	Del_Xq21.33	1	1
Del_20p12.1	Del_Xq21.33	1	1
Del_22q13.32	Del_Xp11.3	1	1
Del_22q13.32	Del_Xq21.33	1	1
Del_Xp11.3	Del_Xq21.33	1	1
17p-Del	Del_17p12	1.05e-24	1
1p-Amp	1q-Amp	1.06e-09	1
11q-Del	Del_11p15.1	1.08e-05	1
8p-Del	Del_8p23.1	1.08e-19	1
11q-Del	Del_11q23.3	1.08e-21	1
4q-Del	Del_4q22.1	1.14e-17	1
Del_11q23.3	Del_11q25	1.18e-45	1
8q-Amp	Amp_8q24.21	1.1e-13	1
Del_4q21.3	Del_4q22.1	1.21e-18	1
3q-Amp	Amp_3q26.31	1.29e-22	1
Del_4q21.3	Del_4q35.2	1.33e-09	1
20p-Amp	20q-Amp	1.3e-19	1
22q-Del	Del_22q13.32	1.48e-09	1
Amp_1p31.3	Amp_1q21.3	1.52e-05	1
4p-Del	Del_4q22.1	1.52e-06	1
Amp_3q26.31	Amp_3q28	1.54e-42	1
Del_13q12.11	Del_13q14.2	1.6e-15	1
Amp_1q21.3	Amp_1q44	1.93e-25	1
1q-Amp	Amp_1p31.3	1.97e-05	1
4p-Del	4q-Del	2.09e-10	1
13q-Del	Del_13q14.2	2.37e-14	1
8p-Del	Del_8p23.3	2.37e-16	1
18q-Del	Del_18q21.2	2.43e-23	1
1q-Amp	Amp_1q44	2.46e-20	1
Amp_13q22.1	Amp_13q34	2.4e-07	1
4q-Del	Del_4q21.3	2.58e-14	1
4p-Del	Del_5q35.2	2.59e-05	1
13q-Del	Del_13q12.11	2.62e-11	1
11p-Del	Del_11p15.1	2.67e-18	1
4q-Del	Del_4q35.2	2.88e-12	1
Del_4q22.1	Del_4q35.2	2.88e-12	1
6q-Del	Del_6p24.2	2.93e-05	1
1p-Amp	Amp_1p31.3	2.93e-12	1
11p-Del	11q-Del	2.94e-08	1
5p-Amp	Amp_5p15.33	2.95e-24	1
HLA-A	MUC4	2e-05	1
Del_4q22.1	Del_7q34	3.03e-05	1
6q-Del	Del_6q26	3.28e-16	1
1p-Amp	Amp_1q21.3	3.59e-07	1
1q-Amp	Amp_1q21.3	3.69e-22	1
10q-Del	Del_10q23.31	3.6e-15	1
Amp_5p15.33	Amp_19q13.13	3.73e-05	1
Del_11p15.1	Del_17p12	3.77e-05	1
3q-Amp	Amp_3q28	3.93e-20	1
5q-Del	Del_5q12.1	4.28e-19	1
BAP1	6q-Del	4.43e-05	1
4p-Del	Del_5q12.1	4.62e-05	1
Del_5q12.1	Del_5q35.2	4.72e-18	1
4p-Del	Del_4q35.2	4.9e-06	1
Del_4q22.1	Del_11p15.1	5.27e-05	1
11q-Del	Del_11q25	5.32e-21	1
Del_16q11.2	Del_16q23.1	6.14e-10	1
Del_5q35.2	Del_11p15.1	6.21e-05	1
4p-Del	Del_4q21.3	6.35e-07	1
Del_3p14.2	Del_13q12.11	7.08e-05	1
5q-Del	Del_4q21.3	7.19e-05	1
20p-Amp	Amp_20q11.21	7.63e-14	1
3p-Del	Del_3p14.2	7.93e-20	1
Del_8p23.3	Del_8p23.1	7.95e-31	1
Del_4q21.3	Del_7q34	8.39e-05	1
5q-Del	Del_5q35.2	8.55e-15	1
Del_4q35.2	Del_7q34	8.71e-07	1
HLA-B	FAT2	9.01e-05	1
Del_3p14.2	Del_4q22.1	9.11e-05	1
20q-Amp	Amp_20q11.21	9.96e-25	1
