
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/ParadigmReport/broadinstitute.org/cancer.genome.analysis/00363/26/ParadigmReport.R")
> result <- main("/xchip/tcga/Tools/Nozzle/v1.current", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/ParadigmReportPreprocess/COAD-TP/15131966/resultSummary.tab", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/ParadigmReportPreprocess/COAD-TP/15131966/resultTables.zip", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/ParadigmReportPreprocess/COAD-TP/15131966/resultPngs.zip", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/ParadigmReportPreprocess/COAD-TP/15131966/pngToPathwayMap.txt", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/ParadigmPreprocess/COAD-TP/15084536/paradigmInputs.txt", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/Paradigm/COAD-TP/15087204/inferredPathwayLevels.tab", "/xchip/cga/gdac-prod/tcga-gdac/jobResults/Paradigm/COAD-TP/15087204/finalParams.txt")
> q(save="no")
