[1] "ofn"        "-oTLUSC-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LUSC-TP/15114194/LUSC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LUSC-TP/15093660/transformed.cor.cli.txt"

nPatients in clinical file=504, in cluster file=501, common to both=501
[1]  83 501
[1] "AMP PEAK  1(1Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          258                           243 
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          258                           243 
[1] "AMP PEAK  2(2P16.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          275                           226 
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          275                           226 
[1] "AMP PEAK  3(2Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          172                           329 
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          172                           329 
[1] "AMP PEAK  4(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE 
                           452                             49 
  AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE 
                           452                             49 
[1] "AMP PEAK  5(4Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                        119                         382 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                        119                         382 
[1] "AMP PEAK  6(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           387                            114 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           387                            114 
[1] "AMP PEAK  7(5P12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE 
                        354                         147 
  AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE 
                        354                         147 
[1] "AMP PEAK  8(6P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE 
                          166                           335 
  AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE 
                          166                           335 
[1] "AMP PEAK  9(6Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                        152                         349 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                        152                         349 
[1] "AMP PEAK 10(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE 
                          256                           245 
  AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE 
                          256                           245 
[1] "AMP PEAK 11(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE 
                          264                           237 
  AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE 
                          264                           237 
[1] "AMP PEAK 12(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE 
                           238                            263 
  AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE 
                           238                            263 
[1] "AMP PEAK 13(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                           352                            149 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                           352                            149 
[1] "AMP PEAK 14(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE 
                          136                           365 
  AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE 
                          136                           365 
[1] "AMP PEAK 15(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                           185                            316 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                           185                            316 
[1] "AMP PEAK 16(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE 
                            255                             246 
  AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE 
                            255                             246 
[1] "AMP PEAK 17(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE 
                         178                          323 
  AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE 
                         178                          323 
[1] "AMP PEAK 18(13Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE 
                          91                          410 
  AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE 
                          91                          410 
[1] "AMP PEAK 19(14Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE 
                           159                            342 
  AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE 
                           159                            342 
[1] "AMP PEAK 20(14Q32.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE 
                            158                             343 
  AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE 
                            158                             343 
[1] "AMP PEAK 21(15Q26.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           179                            322 
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           179                            322 
[1] "AMP PEAK 22(17Q25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           236                            265 
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           236                            265 
[1] "AMP PEAK 23(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            179                             322 
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            179                             322 
[1] "AMP PEAK 24(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           151                            350 
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           151                            350 
[1] "AMP PEAK 25(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         224                          277 
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         224                          277 
[1] "AMP PEAK 26(19Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           234                            267 
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           234                            267 
[1] "AMP PEAK 27(20P12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           280                            221 
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           280                            221 
[1] "AMP PEAK 28(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            306                             195 
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            306                             195 
[1] "AMP PEAK 29(22Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            256                             245 
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            256                             245 
[1] "AMP PEAK 30(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        124                         377 
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        124                         377 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           228                            273 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           228                            273 
[1] "DEL PEAK  2(1P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          221                           280 
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          221                           280 
[1] "DEL PEAK  3(2P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           451 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           451 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          131                           370 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          131                           370 
[1] "DEL PEAK  5(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          159                           342 
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          159                           342 
[1] "DEL PEAK  6(3P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          398                           103 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          398                           103 
[1] "DEL PEAK  7(3P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        434                          67 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        434                          67 
[1] "DEL PEAK  8(3P12.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          427                            74 
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          427                            74 
[1] "DEL PEAK  9(3P12.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE 
                          421                            80 
  DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE 
                          421                            80 
[1] "DEL PEAK 10(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE 
                           79                           422 
  DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE 
                           79                           422 
[1] "DEL PEAK 11(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          317                           184 
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          317                           184 
[1] "DEL PEAK 12(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          285                           216 
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          285                           216 
[1] "DEL PEAK 13(4Q32.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE 
                          329                           172 
  DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE 
                          329                           172 
[1] "DEL PEAK 14(4Q35.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE 
                          331                           170 
  DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE 
                          331                           170 
[1] "DEL PEAK 15(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE 
                          369                           132 
  DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE 
                          369                           132 
[1] "DEL PEAK 16(5Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE 
                          386                           115 
  DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE 
                          386                           115 
[1] "DEL PEAK 17(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE 
                          134                           367 
  DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE 
                          134                           367 
[1] "DEL PEAK 18(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE 
                           122                            379 
  DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE 
                           122                            379 
[1] "DEL PEAK 19(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE 
                        134                         367 
  DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE 
                        134                         367 
[1] "DEL PEAK 20(7Q11.22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE 
                            48                            453 
  DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE 
                            48                            453 
[1] "DEL PEAK 21(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE 
                          104                           397 
  DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE 
                          104                           397 
[1] "DEL PEAK 22(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE 
                          341                           160 
  DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE 
                          341                           160 
[1] "DEL PEAK 23(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE 
                        332                         169 
  DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE 
                        332                         169 
[1] "DEL PEAK 24(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE 
                          388                           113 
  DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE 
                          388                           113 
[1] "DEL PEAK 25(9P21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE 
                          326                           175 
  DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE 
                          326                           175 
[1] "DEL PEAK 26(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE 
                           251                            250 
  DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE 
                           251                            250 
[1] "DEL PEAK 27(10P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE 
                           219                            282 
  DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE 
                           219                            282 
[1] "DEL PEAK 28(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE 
                            268                             233 
  DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE 
                            268                             233 
[1] "DEL PEAK 29(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE 
                           245                            256 
  DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE 
                           245                            256 
[1] "DEL PEAK 30(11Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE 
                           162                            339 
  DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE 
                           162                            339 
[1] "DEL PEAK 31(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE 
                         184                          317 
  DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE 
                         184                          317 
[1] "DEL PEAK 32(12Q24.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE 
                             86                             415 
  DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE 
                             86                             415 
[1] "DEL PEAK 33(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE 
                            331                             170 
  DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE 
                            331                             170 
[1] "DEL PEAK 34(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE 
                           344                            157 
  DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE 
                           344                            157 
[1] "DEL PEAK 35(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE 
                           175                            326 
  DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE 
                           175                            326 
[1] "DEL PEAK 36(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE 
                           167                            334 
  DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE 
                           167                            334 
[1] "DEL PEAK 37(15Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE 
                           169                            332 
  DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE 
                           169                            332 
[1] "DEL PEAK 38(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE 
                           187                            314 
  DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE 
                           187                            314 
[1] "DEL PEAK 39(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE 
                           210                            291 
  DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE 
                           210                            291 
[1] "DEL PEAK 40(17P11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE 
                           272                            229 
  DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE 
                           272                            229 
[1] "DEL PEAK 41(17Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE 
                           132                            369 
  DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE 
                           132                            369 
[1] "DEL PEAK 42(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE 
                           102                            399 
  DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE 
                           102                            399 
[1] "DEL PEAK 43(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE 
                         234                          267 
  DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE 
                         234                          267 
[1] "DEL PEAK 44(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                           236                            265 
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                           236                            265 
[1] "DEL PEAK 45(19Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE 
                            149                             352 
  DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE 
                            149                             352 
[1] "DEL PEAK 46(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE 
                           246                            255 
  DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE 
                           246                            255 
[1] "DEL PEAK 47(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE 
                           281                            220 
  DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE 
                           281                            220 
[1] "DEL PEAK 48(22Q11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE 
                             95                             406 
  DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE 
                             95                             406 
[1] "DEL PEAK 49(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE 
                            128                             373 
  DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE 
                            128                             373 
[1] "DEL PEAK 50(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE 
                          155                           346 
  DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE 
                          155                           346 
[1] "DEL PEAK 51(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                          152                           349 
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                          152                           349 
[1] "DEL PEAK 52(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                          149                           352 
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                          149                           352 
[1] "DEL PEAK 53(XQ22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE 
                          114                           387 
  DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE 
                          114                           387 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 501 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 501 columns, 0 survival variables, and 12 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       18     37     16     16
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     15     16     12
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          18                            24
  CLUS_2                          37                            15
  CLUS_3                          16                            16
  CLUS_4                          16                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       23     38     26
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     18     25
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          38                            18
  CLUS_3                          26                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       73    122     63
  AMP PEAK  1(1Q21.2) WILD-TYPE    109     44     90
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          73                           109
  CLUS_2                         122                            44
  CLUS_3                          63                            90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       57     81     46
  AMP PEAK  1(1Q21.2) WILD-TYPE     95     41     47
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          57                            95
  CLUS_2                          81                            41
  CLUS_3                          46                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       37     36     28
  AMP PEAK  1(1Q21.2) WILD-TYPE     23     37     33
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          37                            23
  CLUS_2                          36                            37
  CLUS_3                          28                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       36     19     26     20
  AMP PEAK  1(1Q21.2) WILD-TYPE     18     22     26     27
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          19                            22
  CLUS_3                          26                            26
  CLUS_4                          20                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       44    106     80     27
  AMP PEAK  1(1Q21.2) WILD-TYPE     69     46     74     52
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          44                            69
  CLUS_2                         106                            46
  CLUS_3                          80                            74
  CLUS_4                          27                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       63    123     71
  AMP PEAK  1(1Q21.2) WILD-TYPE    115     66     60
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          63                           115
  CLUS_2                         123                            66
  CLUS_3                          71                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1Q21.2) MUTATED       66     81     41     43     13
  AMP PEAK  1(1Q21.2) WILD-TYPE     55     53     80     19     24
D1V9, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          66                            55
  CLUS_2                          81                            53
  CLUS_3                          41                            80
  CLUS_4                          43                            19
  CLUS_5                          13                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       64     67     89     24
  AMP PEAK  1(1Q21.2) WILD-TYPE     25     51    110     45
D1V10, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          64                            25
  CLUS_2                          67                            51
  CLUS_3                          89                           110
  CLUS_4                          24                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       30     67     69
  AMP PEAK  1(1Q21.2) WILD-TYPE     59     62     47
D1V11, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          30                            59
  CLUS_2                          67                            62
  CLUS_3                          69                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       15     90     61
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     61     83
D1V12, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          15                            24
  CLUS_2                          90                            61
  CLUS_3                          61                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(2P16.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       19     40     13     13
  AMP PEAK  2(2P16.1) WILD-TYPE     23     12     19     15
D2V1, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          19                            23
  CLUS_2                          40                            12
  CLUS_3                          13                            19
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       24     42     19
  AMP PEAK  2(2P16.1) WILD-TYPE     23     14     32
D2V2, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          24                            23
  CLUS_2                          42                            14
  CLUS_3                          19                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       67    126     82
  AMP PEAK  2(2P16.1) WILD-TYPE    115     40     71
D2V3, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          67                           115
  CLUS_2                         126                            40
  CLUS_3                          82                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       66     90     48
  AMP PEAK  2(2P16.1) WILD-TYPE     86     32     45
D2V4, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          66                            86
  CLUS_2                          90                            32
  CLUS_3                          48                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       33     38     33
  AMP PEAK  2(2P16.1) WILD-TYPE     27     35     28
D2V5, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          38                            35
  CLUS_3                          33                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       28     19     30     27
  AMP PEAK  2(2P16.1) WILD-TYPE     26     22     22     20
D2V6, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          28                            26
  CLUS_2                          19                            22
  CLUS_3                          30                            22
  CLUS_4                          27                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       47    113     87     26
  AMP PEAK  2(2P16.1) WILD-TYPE     66     39     67     53
D2V7, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          47                            66
  CLUS_2                         113                            39
  CLUS_3                          87                            67
  CLUS_4                          26                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       82    131     60
  AMP PEAK  2(2P16.1) WILD-TYPE     96     58     71
D2V8, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          82                            96
  CLUS_2                         131                            58
  CLUS_3                          60                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(2P16.1) MUTATED       65     93     50     33     22
  AMP PEAK  2(2P16.1) WILD-TYPE     56     41     71     29     15
D2V9, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          65                            56
  CLUS_2                          93                            41
  CLUS_3                          50                            71
  CLUS_4                          33                            29
  CLUS_5                          22                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       54     64    122     23
  AMP PEAK  2(2P16.1) WILD-TYPE     35     54     77     46
D2V10, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          54                            35
  CLUS_2                          64                            54
  CLUS_3                         122                            77
  CLUS_4                          23                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       39     76     71
  AMP PEAK  2(2P16.1) WILD-TYPE     50     53     45
D2V11, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          39                            50
  CLUS_2                          76                            53
  CLUS_3                          71                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       22    104     60
  AMP PEAK  2(2P16.1) WILD-TYPE     17     47     84
D2V12, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          22                            17
  CLUS_2                         104                            47
  CLUS_3                          60                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(2Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       10     27      8     10
  AMP PEAK  3(2Q31.2) WILD-TYPE     32     25     24     18
D3V1, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          27                            25
  CLUS_3                           8                            24
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       13     28     14
  AMP PEAK  3(2Q31.2) WILD-TYPE     34     28     37
D3V2, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          28                            28
  CLUS_3                          14                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       38     80     54
  AMP PEAK  3(2Q31.2) WILD-TYPE    144     86     99
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          38                           144
  CLUS_2                          80                            86
  CLUS_3                          54                            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       39     66     26
  AMP PEAK  3(2Q31.2) WILD-TYPE    113     56     67
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          39                           113
  CLUS_2                          66                            56
  CLUS_3                          26                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       22     22     21
  AMP PEAK  3(2Q31.2) WILD-TYPE     38     51     40
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          22                            51
  CLUS_3                          21                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       16     12     18     19
  AMP PEAK  3(2Q31.2) WILD-TYPE     38     29     34     28
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          16                            38
  CLUS_2                          12                            29
  CLUS_3                          18                            34
  CLUS_4                          19                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       28     78     48     17
  AMP PEAK  3(2Q31.2) WILD-TYPE     85     74    106     62
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          28                            85
  CLUS_2                          78                            74
  CLUS_3                          48                           106
  CLUS_4                          17                            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       42     91     38
  AMP PEAK  3(2Q31.2) WILD-TYPE    136     98     93
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          42                           136
  CLUS_2                          91                            98
  CLUS_3                          38                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(2Q31.2) MUTATED       45     62     29     18     10
  AMP PEAK  3(2Q31.2) WILD-TYPE     76     72     92     44     27
D3V9, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          45                            76
  CLUS_2                          62                            72
  CLUS_3                          29                            92
  CLUS_4                          18                            44
  CLUS_5                          10                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       35     42     70     17
  AMP PEAK  3(2Q31.2) WILD-TYPE     54     76    129     52
D3V10, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          35                            54
  CLUS_2                          42                            76
  CLUS_3                          70                           129
  CLUS_4                          17                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       18     47     48
  AMP PEAK  3(2Q31.2) WILD-TYPE     71     82     68
D3V11, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          18                            71
  CLUS_2                          47                            82
  CLUS_3                          48                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED        9     68     36
  AMP PEAK  3(2Q31.2) WILD-TYPE     30     83    108
D3V12, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          68                            83
  CLUS_3                          36                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.33) MUTATED       40     52     25     23
  AMP PEAK  4(3Q26.33) WILD-TYPE      2      0      7      5
D4V1, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           40                              2
  CLUS_2                           52                              0
  CLUS_3                           25                              7
  CLUS_4                           23                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED       43     56     41
  AMP PEAK  4(3Q26.33) WILD-TYPE      4      0     10
D4V2, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           43                              4
  CLUS_2                           56                              0
  CLUS_3                           41                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED      141    165    146
  AMP PEAK  4(3Q26.33) WILD-TYPE     41      1      7
D4V3, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                          141                             41
  CLUS_2                          165                              1
  CLUS_3                          146                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED      121    122     87
  AMP PEAK  4(3Q26.33) WILD-TYPE     31      0      6
D4V4, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                          121                             31
  CLUS_2                          122                              0
  CLUS_3                           87                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED       55     67     51
  AMP PEAK  4(3Q26.33) WILD-TYPE      5      6     10
D4V5, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           55                              5
  CLUS_2                           67                              6
  CLUS_3                           51                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.33) MUTATED       47     32     50     44
  AMP PEAK  4(3Q26.33) WILD-TYPE      7      9      2      3
D4V6, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           47                              7
  CLUS_2                           32                              9
  CLUS_3                           50                              2
  CLUS_4                           44                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.33) MUTATED      107    152    132     58
  AMP PEAK  4(3Q26.33) WILD-TYPE      6      0     22     21
D4V7, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                          107                              6
  CLUS_2                          152                              0
  CLUS_3                          132                             22
  CLUS_4                           58                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED      163    188     98
  AMP PEAK  4(3Q26.33) WILD-TYPE     15      1     33
D4V8, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                          163                             15
  CLUS_2                          188                              1
  CLUS_3                           98                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(3Q26.33) MUTATED      108    130     97     59     35
  AMP PEAK  4(3Q26.33) WILD-TYPE     13      4     24      3      2
D4V9, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                          108                             13
  CLUS_2                          130                              4
  CLUS_3                           97                             24
  CLUS_4                           59                              3
  CLUS_5                           35                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.33) MUTATED       89    108    189     43
  AMP PEAK  4(3Q26.33) WILD-TYPE      0     10     10     26
D4V10, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           89                              0
  CLUS_2                          108                             10
  CLUS_3                          189                             10
  CLUS_4                           43                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED       73    118    109
  AMP PEAK  4(3Q26.33) WILD-TYPE     16     11      7
D4V11, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           73                             16
  CLUS_2                          118                             11
  CLUS_3                          109                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.33) MUTATED       36    146    118
  AMP PEAK  4(3Q26.33) WILD-TYPE      3      5     26
D4V12, multiclass
        clus
vv       AMP PEAK  4(3Q26.33) MUTATED AMP PEAK  4(3Q26.33) WILD-TYPE
  CLUS_1                           36                              3
  CLUS_2                          146                              5
  CLUS_3                          118                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(4Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED       12     17      8      9
  AMP PEAK  5(4Q12) WILD-TYPE     30     35     24     19
D5V1, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        12                          30
  CLUS_2                        17                          35
  CLUS_3                         8                          24
  CLUS_4                         9                          19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       15     17     14
  AMP PEAK  5(4Q12) WILD-TYPE     32     39     37
D5V2, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        15                          32
  CLUS_2                        17                          39
  CLUS_3                        14                          37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       29     40     50
  AMP PEAK  5(4Q12) WILD-TYPE    153    126    103
D5V3, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        29                         153
  CLUS_2                        40                         126
  CLUS_3                        50                         103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       26     32     21
  AMP PEAK  5(4Q12) WILD-TYPE    126     90     72
D5V4, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        26                         126
  CLUS_2                        32                          90
  CLUS_3                        21                          72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       13     19      9
  AMP PEAK  5(4Q12) WILD-TYPE     47     54     52
D5V5, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        19                          54
  CLUS_3                         9                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED        9      6     17      9
  AMP PEAK  5(4Q12) WILD-TYPE     45     35     35     38
D5V6, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         9                          45
  CLUS_2                         6                          35
  CLUS_3                        17                          35
  CLUS_4                         9                          38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED       27     37     43     10
  AMP PEAK  5(4Q12) WILD-TYPE     86    115    111     69
D5V7, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        27                          86
  CLUS_2                        37                         115
  CLUS_3                        43                         111
  CLUS_4                        10                          69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       38     49     30
  AMP PEAK  5(4Q12) WILD-TYPE    140    140    101
D5V8, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        38                         140
  CLUS_2                        49                         140
  CLUS_3                        30                         101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(4Q12) MUTATED       32     35     20     10     14
  AMP PEAK  5(4Q12) WILD-TYPE     89     99    101     52     23
D5V9, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        32                          89
  CLUS_2                        35                          99
  CLUS_3                        20                         101
  CLUS_4                        10                          52
  CLUS_5                        14                          23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED       16     31     51     13
  AMP PEAK  5(4Q12) WILD-TYPE     73     87    148     56
D5V10, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        16                          73
  CLUS_2                        31                          87
  CLUS_3                        51                         148
  CLUS_4                        13                          56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       20     31     20
  AMP PEAK  5(4Q12) WILD-TYPE     69     98     96
D5V11, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                          69
  CLUS_2                        31                          98
  CLUS_3                        20                          96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       14     33     24
  AMP PEAK  5(4Q12) WILD-TYPE     25    118    120
D5V12, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        14                          25
  CLUS_2                        33                         118
  CLUS_3                        24                         120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED       35     41     25     21
  AMP PEAK  6(5P15.33) WILD-TYPE      7     11      7      7
D6V1, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           35                              7
  CLUS_2                           41                             11
  CLUS_3                           25                              7
  CLUS_4                           21                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       36     44     42
  AMP PEAK  6(5P15.33) WILD-TYPE     11     12      9
D6V2, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           36                             11
  CLUS_2                           44                             12
  CLUS_3                           42                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      126    121    140
  AMP PEAK  6(5P15.33) WILD-TYPE     56     45     13
D6V3, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          126                             56
  CLUS_2                          121                             45
  CLUS_3                          140                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      114     86     83
  AMP PEAK  6(5P15.33) WILD-TYPE     38     36     10
D6V4, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          114                             38
  CLUS_2                           86                             36
  CLUS_3                           83                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       44     57     51
  AMP PEAK  6(5P15.33) WILD-TYPE     16     16     10
D6V5, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           57                             16
  CLUS_3                           51                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED       44     28     41     39
  AMP PEAK  6(5P15.33) WILD-TYPE     10     13     11      8
D6V6, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           44                             10
  CLUS_2                           28                             13
  CLUS_3                           41                             11
  CLUS_4                           39                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED       87    113    125     59
  AMP PEAK  6(5P15.33) WILD-TYPE     26     39     29     20
D6V7, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           87                             26
  CLUS_2                          113                             39
  CLUS_3                          125                             29
  CLUS_4                           59                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      144    135    105
  AMP PEAK  6(5P15.33) WILD-TYPE     34     54     26
D6V8, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          144                             34
  CLUS_2                          135                             54
  CLUS_3                          105                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(5P15.33) MUTATED       96    101     93     45     32
  AMP PEAK  6(5P15.33) WILD-TYPE     25     33     28     17      5
D6V9, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           96                             25
  CLUS_2                          101                             33
  CLUS_3                           93                             28
  CLUS_4                           45                             17
  CLUS_5                           32                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED       66     88    168     45
  AMP PEAK  6(5P15.33) WILD-TYPE     23     30     31     24
D6V10, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           66                             23
  CLUS_2                           88                             30
  CLUS_3                          168                             31
  CLUS_4                           45                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       68    104     86
  AMP PEAK  6(5P15.33) WILD-TYPE     21     25     30
D6V11, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           68                             21
  CLUS_2                          104                             25
  CLUS_3                           86                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       34    116    108
  AMP PEAK  6(5P15.33) WILD-TYPE      5     35     36
D6V12, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           34                              5
  CLUS_2                          116                             35
  CLUS_3                          108                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(5P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P12) MUTATED       32     39     23     20
  AMP PEAK  7(5P12) WILD-TYPE     10     13      9      8
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        32                          10
  CLUS_2                        39                          13
  CLUS_3                        23                           9
  CLUS_4                        20                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED       33     42     39
  AMP PEAK  7(5P12) WILD-TYPE     14     14     12
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        33                          14
  CLUS_2                        42                          14
  CLUS_3                        39                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED      106    118    130
  AMP PEAK  7(5P12) WILD-TYPE     76     48     23
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                       106                          76
  CLUS_2                       118                          48
  CLUS_3                       130                          23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED       98     80     79
  AMP PEAK  7(5P12) WILD-TYPE     54     42     14
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        98                          54
  CLUS_2                        80                          42
  CLUS_3                        79                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED       40     51     49
  AMP PEAK  7(5P12) WILD-TYPE     20     22     12
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        40                          20
  CLUS_2                        51                          22
  CLUS_3                        49                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P12) MUTATED       40     28     38     34
  AMP PEAK  7(5P12) WILD-TYPE     14     13     14     13
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        40                          14
  CLUS_2                        28                          13
  CLUS_3                        38                          14
  CLUS_4                        34                          13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P12) MUTATED       75    109    115     52
  AMP PEAK  7(5P12) WILD-TYPE     38     43     39     27
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        75                          38
  CLUS_2                       109                          43
  CLUS_3                       115                          39
  CLUS_4                        52                          27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED      126    131     94
  AMP PEAK  7(5P12) WILD-TYPE     52     58     37
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                       126                          52
  CLUS_2                       131                          58
  CLUS_3                        94                          37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P12) MUTATED       90     90     84     45     28
  AMP PEAK  7(5P12) WILD-TYPE     31     44     37     17      9
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        90                          31
  CLUS_2                        90                          44
  CLUS_3                        84                          37
  CLUS_4                        45                          17
  CLUS_5                        28                           9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P12) MUTATED       65     79    151     42
  AMP PEAK  7(5P12) WILD-TYPE     24     39     48     27
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        65                          24
  CLUS_2                        79                          39
  CLUS_3                       151                          48
  CLUS_4                        42                          27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED       59     99     74
  AMP PEAK  7(5P12) WILD-TYPE     30     30     42
D7V11, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        59                          30
  CLUS_2                        99                          30
  CLUS_3                        74                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P12) MUTATED       29    102    101
  AMP PEAK  7(5P12) WILD-TYPE     10     49     43
D7V12, multiclass
        clus
vv       AMP PEAK  7(5P12) MUTATED AMP PEAK  7(5P12) WILD-TYPE
  CLUS_1                        29                          10
  CLUS_2                       102                          49
  CLUS_3                       101                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(6P12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P12.1) MUTATED       12     18     12     12
  AMP PEAK  8(6P12.1) WILD-TYPE     30     34     20     16
D8V1, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                          18                            34
  CLUS_3                          12                            20
  CLUS_4                          12                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       14     19     21
  AMP PEAK  8(6P12.1) WILD-TYPE     33     37     30
D8V2, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          19                            37
  CLUS_3                          21                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       36     72     58
  AMP PEAK  8(6P12.1) WILD-TYPE    146     94     95
D8V3, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          36                           146
  CLUS_2                          72                            94
  CLUS_3                          58                            95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       39     48     28
  AMP PEAK  8(6P12.1) WILD-TYPE    113     74     65
D8V4, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          39                           113
  CLUS_2                          48                            74
  CLUS_3                          28                            65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       20     25     19
  AMP PEAK  8(6P12.1) WILD-TYPE     40     48     42
D8V5, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          25                            48
  CLUS_3                          19                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P12.1) MUTATED       15     12     18     19
  AMP PEAK  8(6P12.1) WILD-TYPE     39     29     34     28
D8V6, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          15                            39
  CLUS_2                          12                            29
  CLUS_3                          18                            34
  CLUS_4                          19                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P12.1) MUTATED       21     62     57     24
  AMP PEAK  8(6P12.1) WILD-TYPE     92     90     97     55
D8V7, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          21                            92
  CLUS_2                          62                            90
  CLUS_3                          57                            97
  CLUS_4                          24                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       47     68     49
  AMP PEAK  8(6P12.1) WILD-TYPE    131    121     82
D8V8, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          47                           131
  CLUS_2                          68                           121
  CLUS_3                          49                            82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(6P12.1) MUTATED       39     50     34     20     14
  AMP PEAK  8(6P12.1) WILD-TYPE     82     84     87     42     23
D8V9, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          39                            82
  CLUS_2                          50                            84
  CLUS_3                          34                            87
  CLUS_4                          20                            42
  CLUS_5                          14                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P12.1) MUTATED       35     35     71     16
  AMP PEAK  8(6P12.1) WILD-TYPE     54     83    128     53
D8V10, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          35                            54
  CLUS_2                          35                            83
  CLUS_3                          71                           128
  CLUS_4                          16                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       23     47     41
  AMP PEAK  8(6P12.1) WILD-TYPE     66     82     75
D8V11, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          23                            66
  CLUS_2                          47                            82
  CLUS_3                          41                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P12.1) MUTATED       13     67     31
  AMP PEAK  8(6P12.1) WILD-TYPE     26     84    113
D8V12, multiclass
        clus
vv       AMP PEAK  8(6P12.1) MUTATED AMP PEAK  8(6P12.1) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                          67                            84
  CLUS_3                          31                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6Q12) MUTATED       13     17      9     10
  AMP PEAK  9(6Q12) WILD-TYPE     29     35     23     18
D9V1, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        13                          29
  CLUS_2                        17                          35
  CLUS_3                         9                          23
  CLUS_4                        10                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       13     18     18
  AMP PEAK  9(6Q12) WILD-TYPE     34     38     33
D9V2, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        13                          34
  CLUS_2                        18                          38
  CLUS_3                        18                          33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       33     64     55
  AMP PEAK  9(6Q12) WILD-TYPE    149    102     98
D9V3, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        33                         149
  CLUS_2                        64                         102
  CLUS_3                        55                          98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       34     50     23
  AMP PEAK  9(6Q12) WILD-TYPE    118     72     70
D9V4, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        34                         118
  CLUS_2                        50                          72
  CLUS_3                        23                          70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       22     20     18
  AMP PEAK  9(6Q12) WILD-TYPE     38     53     43
D9V5, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        22                          38
  CLUS_2                        20                          53
  CLUS_3                        18                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6Q12) MUTATED       17     11     14     18
  AMP PEAK  9(6Q12) WILD-TYPE     37     30     38     29
D9V6, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        17                          37
  CLUS_2                        11                          30
  CLUS_3                        14                          38
  CLUS_4                        18                          29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6Q12) MUTATED       20     58     53     19
  AMP PEAK  9(6Q12) WILD-TYPE     93     94    101     60
D9V7, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        20                          93
  CLUS_2                        58                          94
  CLUS_3                        53                         101
  CLUS_4                        19                          60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       38     66     46
  AMP PEAK  9(6Q12) WILD-TYPE    140    123     85
D9V8, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        38                         140
  CLUS_2                        66                         123
  CLUS_3                        46                          85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6Q12) MUTATED       39     41     32     22     12
  AMP PEAK  9(6Q12) WILD-TYPE     82     93     89     40     25
D9V9, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        39                          82
  CLUS_2                        41                          93
  CLUS_3                        32                          89
  CLUS_4                        22                          40
  CLUS_5                        12                          25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6Q12) MUTATED       36     30     66     14
  AMP PEAK  9(6Q12) WILD-TYPE     53     88    133     55
D9V10, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        36                          53
  CLUS_2                        30                          88
  CLUS_3                        66                         133
  CLUS_4                        14                          55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       18     44     39
  AMP PEAK  9(6Q12) WILD-TYPE     71     85     77
D9V11, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        18                          71
  CLUS_2                        44                          85
  CLUS_3                        39                          77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6Q12) MUTATED       12     58     31
  AMP PEAK  9(6Q12) WILD-TYPE     27     93    113
D9V12, multiclass
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                        12                          27
  CLUS_2                        58                          93
  CLUS_3                        31                         113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P11.2) MUTATED       21     34     15     11
  AMP PEAK 10(7P11.2) WILD-TYPE     21     18     17     17
D10V1, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          34                            18
  CLUS_3                          15                            17
  CLUS_4                          11                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       23     37     21
  AMP PEAK 10(7P11.2) WILD-TYPE     24     19     30
D10V2, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          37                            19
  CLUS_3                          21                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       73    109     74
  AMP PEAK 10(7P11.2) WILD-TYPE    109     57     79
D10V3, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          73                           109
  CLUS_2                         109                            57
  CLUS_3                          74                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       63     75     48
  AMP PEAK 10(7P11.2) WILD-TYPE     89     47     45
D10V4, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          63                            89
  CLUS_2                          75                            47
  CLUS_3                          48                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       26     37     30
  AMP PEAK 10(7P11.2) WILD-TYPE     34     36     31
D10V5, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          26                            34
  CLUS_2                          37                            36
  CLUS_3                          30                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P11.2) MUTATED       22     22     25     24
  AMP PEAK 10(7P11.2) WILD-TYPE     32     19     27     23
D10V6, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          22                            32
  CLUS_2                          22                            19
  CLUS_3                          25                            27
  CLUS_4                          24                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P11.2) MUTATED       55     96     72     31
  AMP PEAK 10(7P11.2) WILD-TYPE     58     56     82     48
D10V7, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          55                            58
  CLUS_2                          96                            56
  CLUS_3                          72                            82
  CLUS_4                          31                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       78    122     54
  AMP PEAK 10(7P11.2) WILD-TYPE    100     67     77
D10V8, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          78                           100
  CLUS_2                         122                            67
  CLUS_3                          54                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(7P11.2) MUTATED       64     80     53     32     18
  AMP PEAK 10(7P11.2) WILD-TYPE     57     54     68     30     19
D10V9, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          64                            57
  CLUS_2                          80                            54
  CLUS_3                          53                            68
  CLUS_4                          32                            30
  CLUS_5                          18                            19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P11.2) MUTATED       58     56    100     33
  AMP PEAK 10(7P11.2) WILD-TYPE     31     62     99     36
D10V10, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          58                            31
  CLUS_2                          56                            62
  CLUS_3                         100                            99
  CLUS_4                          33                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       43     58     70
  AMP PEAK 10(7P11.2) WILD-TYPE     46     71     46
D10V11, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          43                            46
  CLUS_2                          58                            71
  CLUS_3                          70                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P11.2) MUTATED       19     84     68
  AMP PEAK 10(7P11.2) WILD-TYPE     20     67     76
D10V12, multiclass
        clus
vv       AMP PEAK 10(7P11.2) MUTATED AMP PEAK 10(7P11.2) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                          84                            67
  CLUS_3                          68                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7Q21.2) MUTATED       28     35     15     13
  AMP PEAK 11(7Q21.2) WILD-TYPE     14     17     17     15
D11V1, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          35                            17
  CLUS_3                          15                            17
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       30     39     22
  AMP PEAK 11(7Q21.2) WILD-TYPE     17     17     29
D11V2, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          39                            17
  CLUS_3                          22                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       59    122     83
  AMP PEAK 11(7Q21.2) WILD-TYPE    123     44     70
D11V3, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          59                           123
  CLUS_2                         122                            44
  CLUS_3                          83                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       55     83     48
  AMP PEAK 11(7Q21.2) WILD-TYPE     97     39     45
D11V4, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          55                            97
  CLUS_2                          83                            39
  CLUS_3                          48                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       35     43     25
  AMP PEAK 11(7Q21.2) WILD-TYPE     25     30     36
D11V5, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          43                            30
  CLUS_3                          25                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7Q21.2) MUTATED       27     21     32     23
  AMP PEAK 11(7Q21.2) WILD-TYPE     27     20     20     24
D11V6, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          27                            27
  CLUS_2                          21                            20
  CLUS_3                          32                            20
  CLUS_4                          23                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7Q21.2) MUTATED       55    108     69     30
  AMP PEAK 11(7Q21.2) WILD-TYPE     58     44     85     49
D11V7, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          55                            58
  CLUS_2                         108                            44
  CLUS_3                          69                            85
  CLUS_4                          30                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       74    130     58
  AMP PEAK 11(7Q21.2) WILD-TYPE    104     59     73
D11V8, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          74                           104
  CLUS_2                         130                            59
  CLUS_3                          58                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(7Q21.2) MUTATED       71     86     45     35     17
  AMP PEAK 11(7Q21.2) WILD-TYPE     50     48     76     27     20
D11V9, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          71                            50
  CLUS_2                          86                            48
  CLUS_3                          45                            76
  CLUS_4                          35                            27
  CLUS_5                          17                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7Q21.2) MUTATED       63     63    100     28
  AMP PEAK 11(7Q21.2) WILD-TYPE     26     55     99     41
D11V10, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          63                            26
  CLUS_2                          63                            55
  CLUS_3                         100                            99
  CLUS_4                          28                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       33     63     72
  AMP PEAK 11(7Q21.2) WILD-TYPE     56     66     44
D11V11, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          33                            56
  CLUS_2                          63                            66
  CLUS_3                          72                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7Q21.2) MUTATED       17     93     58
  AMP PEAK 11(7Q21.2) WILD-TYPE     22     58     86
D11V12, multiclass
        clus
vv       AMP PEAK 11(7Q21.2) MUTATED AMP PEAK 11(7Q21.2) WILD-TYPE
  CLUS_1                          17                            22
  CLUS_2                          93                            58
  CLUS_3                          58                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.23) MUTATED       30     24     12     12
  AMP PEAK 12(8P11.23) WILD-TYPE     12     28     20     16
D12V1, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           24                             28
  CLUS_3                           12                             20
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       30     26     22
  AMP PEAK 12(8P11.23) WILD-TYPE     17     30     29
D12V2, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           30                             17
  CLUS_2                           26                             30
  CLUS_3                           22                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       73     71     94
  AMP PEAK 12(8P11.23) WILD-TYPE    109     95     59
D12V3, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           73                            109
  CLUS_2                           71                             95
  CLUS_3                           94                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       61     56     52
  AMP PEAK 12(8P11.23) WILD-TYPE     91     66     41
D12V4, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           61                             91
  CLUS_2                           56                             66
  CLUS_3                           52                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       25     42     31
  AMP PEAK 12(8P11.23) WILD-TYPE     35     31     30
D12V5, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           42                             31
  CLUS_3                           31                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.23) MUTATED       22     25     28     23
  AMP PEAK 12(8P11.23) WILD-TYPE     32     16     24     24
D12V6, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           25                             16
  CLUS_3                           28                             24
  CLUS_4                           23                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.23) MUTATED       65     71     68     31
  AMP PEAK 12(8P11.23) WILD-TYPE     48     81     86     48
D12V7, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           65                             48
  CLUS_2                           71                             81
  CLUS_3                           68                             86
  CLUS_4                           31                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       96     86     53
  AMP PEAK 12(8P11.23) WILD-TYPE     82    103     78
D12V8, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           96                             82
  CLUS_2                           86                            103
  CLUS_3                           53                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(8P11.23) MUTATED       59     66     52     29     17
  AMP PEAK 12(8P11.23) WILD-TYPE     62     68     69     33     20
D12V9, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           59                             62
  CLUS_2                           66                             68
  CLUS_3                           52                             69
  CLUS_4                           29                             33
  CLUS_5                           17                             20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.23) MUTATED       35     55    104     29
  AMP PEAK 12(8P11.23) WILD-TYPE     54     63     95     40
D12V10, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           35                             54
  CLUS_2                           55                             63
  CLUS_3                          104                             95
  CLUS_4                           29                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       38     56     57
  AMP PEAK 12(8P11.23) WILD-TYPE     51     73     59
D12V11, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           56                             73
  CLUS_3                           57                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.23) MUTATED       17     75     59
  AMP PEAK 12(8P11.23) WILD-TYPE     22     76     85
D12V12, multiclass
        clus
vv       AMP PEAK 12(8P11.23) MUTATED AMP PEAK 12(8P11.23) WILD-TYPE
  CLUS_1                           17                             22
  CLUS_2                           75                             76
  CLUS_3                           59                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       30     34     22     20
  AMP PEAK 13(8Q24.21) WILD-TYPE     12     18     10      8
D13V1, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           34                             18
  CLUS_3                           22                             10
  CLUS_4                           20                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       32     37     37
  AMP PEAK 13(8Q24.21) WILD-TYPE     15     19     14
D13V2, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           37                             19
  CLUS_3                           37                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED      118    114    120
  AMP PEAK 13(8Q24.21) WILD-TYPE     64     52     33
D13V3, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          118                             64
  CLUS_2                          114                             52
  CLUS_3                          120                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED      104     84     72
  AMP PEAK 13(8Q24.21) WILD-TYPE     48     38     21
D13V4, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          104                             48
  CLUS_2                           84                             38
  CLUS_3                           72                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       44     55     43
  AMP PEAK 13(8Q24.21) WILD-TYPE     16     18     18
D13V5, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           55                             18
  CLUS_3                           43                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       39     27     41     35
  AMP PEAK 13(8Q24.21) WILD-TYPE     15     14     11     12
D13V6, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           39                             15
  CLUS_2                           27                             14
  CLUS_3                           41                             11
  CLUS_4                           35                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       79    105    112     53
  AMP PEAK 13(8Q24.21) WILD-TYPE     34     47     42     26
D13V7, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           79                             34
  CLUS_2                          105                             47
  CLUS_3                          112                             42
  CLUS_4                           53                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED      127    127     95
  AMP PEAK 13(8Q24.21) WILD-TYPE     51     62     36
D13V8, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          127                             51
  CLUS_2                          127                             62
  CLUS_3                           95                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(8Q24.21) MUTATED       85    102     82     38     27
  AMP PEAK 13(8Q24.21) WILD-TYPE     36     32     39     24     10
D13V9, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           85                             36
  CLUS_2                          102                             32
  CLUS_3                           82                             39
  CLUS_4                           38                             24
  CLUS_5                           27                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       60     81    149     44
  AMP PEAK 13(8Q24.21) WILD-TYPE     29     37     50     25
D13V10, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           60                             29
  CLUS_2                           81                             37
  CLUS_3                          149                             50
  CLUS_4                           44                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       61     93     82
  AMP PEAK 13(8Q24.21) WILD-TYPE     28     36     34
D13V11, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           61                             28
  CLUS_2                           93                             36
  CLUS_3                           82                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       29    106    101
  AMP PEAK 13(8Q24.21) WILD-TYPE     10     45     43
D13V12, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           29                             10
  CLUS_2                          106                             45
  CLUS_3                          101                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED       10     13      5     12
  AMP PEAK 14(9P13.3) WILD-TYPE     32     39     27     16
D14V1, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          13                            39
  CLUS_3                           5                            27
  CLUS_4                          12                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       13     16     11
  AMP PEAK 14(9P13.3) WILD-TYPE     34     40     40
D14V2, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          16                            40
  CLUS_3                          11                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       40     62     34
  AMP PEAK 14(9P13.3) WILD-TYPE    142    104    119
D14V3, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          40                           142
  CLUS_2                          62                           104
  CLUS_3                          34                           119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       33     49     23
  AMP PEAK 14(9P13.3) WILD-TYPE    119     73     70
D14V4, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          33                           119
  CLUS_2                          49                            73
  CLUS_3                          23                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       21     13     14
  AMP PEAK 14(9P13.3) WILD-TYPE     39     60     47
D14V5, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          13                            60
  CLUS_3                          14                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED       21      3     11     13
  AMP PEAK 14(9P13.3) WILD-TYPE     33     38     41     34
D14V6, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          21                            33
  CLUS_2                           3                            38
  CLUS_3                          11                            41
  CLUS_4                          13                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED       23     58     41     14
  AMP PEAK 14(9P13.3) WILD-TYPE     90     94    113     65
D14V7, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          23                            90
  CLUS_2                          58                            94
  CLUS_3                          41                           113
  CLUS_4                          14                            65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       34     68     34
  AMP PEAK 14(9P13.3) WILD-TYPE    144    121     97
D14V8, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          34                           144
  CLUS_2                          68                           121
  CLUS_3                          34                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(9P13.3) MUTATED       33     40     20     25     13
  AMP PEAK 14(9P13.3) WILD-TYPE     88     94    101     37     24
D14V9, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          33                            88
  CLUS_2                          40                            94
  CLUS_3                          20                           101
  CLUS_4                          25                            37
  CLUS_5                          13                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED       32     41     48     10
  AMP PEAK 14(9P13.3) WILD-TYPE     57     77    151     59
D14V10, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          32                            57
  CLUS_2                          41                            77
  CLUS_3                          48                           151
  CLUS_4                          10                            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       15     44     32
  AMP PEAK 14(9P13.3) WILD-TYPE     74     85     84
D14V11, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          15                            74
  CLUS_2                          44                            85
  CLUS_3                          32                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED        9     53     29
  AMP PEAK 14(9P13.3) WILD-TYPE     30     98    115
D14V12, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          53                            98
  CLUS_3                          29                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(11Q13.3) MUTATED       17     11     11     14
  AMP PEAK 15(11Q13.3) WILD-TYPE     25     41     21     14
D15V1, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           11                             41
  CLUS_3                           11                             21
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       19     12     22
  AMP PEAK 15(11Q13.3) WILD-TYPE     28     44     29
D15V2, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           12                             44
  CLUS_3                           22                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       46     62     77
  AMP PEAK 15(11Q13.3) WILD-TYPE    136    104     76
D15V3, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           46                            136
  CLUS_2                           62                            104
  CLUS_3                           77                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       44     45     50
  AMP PEAK 15(11Q13.3) WILD-TYPE    108     77     43
D15V4, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           44                            108
  CLUS_2                           45                             77
  CLUS_3                           50                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       26     24     18
  AMP PEAK 15(11Q13.3) WILD-TYPE     34     49     43
D15V5, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(11Q13.3) MUTATED       20     10     22     16
  AMP PEAK 15(11Q13.3) WILD-TYPE     34     31     30     31
D15V6, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           20                             34
  CLUS_2                           10                             31
  CLUS_3                           22                             30
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(11Q13.3) MUTATED       47     43     67     28
  AMP PEAK 15(11Q13.3) WILD-TYPE     66    109     87     51
D15V7, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           47                             66
  CLUS_2                           43                            109
  CLUS_3                           67                             87
  CLUS_4                           28                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       74     58     53
  AMP PEAK 15(11Q13.3) WILD-TYPE    104    131     78
D15V8, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           74                            104
  CLUS_2                           58                            131
  CLUS_3                           53                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(11Q13.3) MUTATED       46     60     40     12     20
  AMP PEAK 15(11Q13.3) WILD-TYPE     75     74     81     50     17
D15V9, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           46                             75
  CLUS_2                           60                             74
  CLUS_3                           40                             81
  CLUS_4                           12                             50
  CLUS_5                           20                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(11Q13.3) MUTATED       24     47     89     18
  AMP PEAK 15(11Q13.3) WILD-TYPE     65     71    110     51
D15V10, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           24                             65
  CLUS_2                           47                             71
  CLUS_3                           89                            110
  CLUS_4                           18                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       29     57     42
  AMP PEAK 15(11Q13.3) WILD-TYPE     60     72     74
D15V11, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           29                             60
  CLUS_2                           57                             72
  CLUS_3                           42                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(11Q13.3) MUTATED       21     66     41
  AMP PEAK 15(11Q13.3) WILD-TYPE     18     85    103
D15V12, multiclass
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  CLUS_1                           21                             18
  CLUS_2                           66                             85
  CLUS_3                           41                            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12P13.33) MUTATED       12     33     13     13
  AMP PEAK 16(12P13.33) WILD-TYPE     30     19     19     15
D16V1, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            12                              30
  CLUS_2                            33                              19
  CLUS_3                            13                              19
  CLUS_4                            13                              15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       17     34     20
  AMP PEAK 16(12P13.33) WILD-TYPE     30     22     31
D16V2, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            17                              30
  CLUS_2                            34                              22
  CLUS_3                            20                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       63    110     82
  AMP PEAK 16(12P13.33) WILD-TYPE    119     56     71
D16V3, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            63                             119
  CLUS_2                           110                              56
  CLUS_3                            82                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       67     76     56
  AMP PEAK 16(12P13.33) WILD-TYPE     85     46     37
D16V4, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            67                              85
  CLUS_2                            76                              46
  CLUS_3                            56                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       35     34     34
  AMP PEAK 16(12P13.33) WILD-TYPE     25     39     27
D16V5, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            34                              39
  CLUS_3                            34                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12P13.33) MUTATED       32     20     25     26
  AMP PEAK 16(12P13.33) WILD-TYPE     22     21     27     21
D16V6, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            32                              22
  CLUS_2                            20                              21
  CLUS_3                            25                              27
  CLUS_4                            26                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12P13.33) MUTATED       37     98     90     28
  AMP PEAK 16(12P13.33) WILD-TYPE     76     54     64     51
D16V7, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            37                              76
  CLUS_2                            98                              54
  CLUS_3                            90                              64
  CLUS_4                            28                              51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       72    111     70
  AMP PEAK 16(12P13.33) WILD-TYPE    106     78     61
D16V8, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            72                             106
  CLUS_2                           111                              78
  CLUS_3                            70                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(12P13.33) MUTATED       61     82     55     31     18
  AMP PEAK 16(12P13.33) WILD-TYPE     60     52     66     31     19
D16V9, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            61                              60
  CLUS_2                            82                              52
  CLUS_3                            55                              66
  CLUS_4                            31                              31
  CLUS_5                            18                              19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12P13.33) MUTATED       57     58    108     24
  AMP PEAK 16(12P13.33) WILD-TYPE     32     60     91     45
D16V10, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            57                              32
  CLUS_2                            58                              60
  CLUS_3                           108                              91
  CLUS_4                            24                              45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       41     73     65
  AMP PEAK 16(12P13.33) WILD-TYPE     48     56     51
D16V11, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            41                              48
  CLUS_2                            73                              56
  CLUS_3                            65                              51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12P13.33) MUTATED       20     95     64
  AMP PEAK 16(12P13.33) WILD-TYPE     19     56     80
D16V12, multiclass
        clus
vv       AMP PEAK 16(12P13.33) MUTATED AMP PEAK 16(12P13.33) WILD-TYPE
  CLUS_1                            20                              19
  CLUS_2                            95                              56
  CLUS_3                            64                              80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12Q15) MUTATED       10     21     11     14
  AMP PEAK 17(12Q15) WILD-TYPE     32     31     21     14
D17V1, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         10                           32
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                         14                           14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       13     23     20
  AMP PEAK 17(12Q15) WILD-TYPE     34     33     31
D17V2, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         13                           34
  CLUS_2                         23                           33
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       46     80     52
  AMP PEAK 17(12Q15) WILD-TYPE    136     86    101
D17V3, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         46                          136
  CLUS_2                         80                           86
  CLUS_3                         52                          101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       42     56     32
  AMP PEAK 17(12Q15) WILD-TYPE    110     66     61
D17V4, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         42                          110
  CLUS_2                         56                           66
  CLUS_3                         32                           61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       25     26     23
  AMP PEAK 17(12Q15) WILD-TYPE     35     47     38
D17V5, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         26                           47
  CLUS_3                         23                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12Q15) MUTATED       23     14     16     21
  AMP PEAK 17(12Q15) WILD-TYPE     31     27     36     26
D17V6, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         23                           31
  CLUS_2                         14                           27
  CLUS_3                         16                           36
  CLUS_4                         21                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12Q15) MUTATED       28     69     53     26
  AMP PEAK 17(12Q15) WILD-TYPE     85     83    101     53
D17V7, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         28                           85
  CLUS_2                         69                           83
  CLUS_3                         53                          101
  CLUS_4                         26                           53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       48     73     55
  AMP PEAK 17(12Q15) WILD-TYPE    130    116     76
D17V8, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         48                          130
  CLUS_2                         73                          116
  CLUS_3                         55                           76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(12Q15) MUTATED       45     54     35     23     11
  AMP PEAK 17(12Q15) WILD-TYPE     76     80     86     39     26
D17V9, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         45                           76
  CLUS_2                         54                           80
  CLUS_3                         35                           86
  CLUS_4                         23                           39
  CLUS_5                         11                           26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12Q15) MUTATED       36     43     67     22
  AMP PEAK 17(12Q15) WILD-TYPE     53     75    132     47
D17V10, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         36                           53
  CLUS_2                         43                           75
  CLUS_3                         67                          132
  CLUS_4                         22                           47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       22     44     50
  AMP PEAK 17(12Q15) WILD-TYPE     67     85     66
D17V11, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         22                           67
  CLUS_2                         44                           85
  CLUS_3                         50                           66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12Q15) MUTATED       10     67     39
  AMP PEAK 17(12Q15) WILD-TYPE     29     84    105
D17V12, multiclass
        clus
vv       AMP PEAK 17(12Q15) MUTATED AMP PEAK 17(12Q15) WILD-TYPE
  CLUS_1                         10                           29
  CLUS_2                         67                           84
  CLUS_3                         39                          105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(13Q34) MUTATED        7     10      5      5
  AMP PEAK 18(13Q34) WILD-TYPE     35     42     27     23
D18V1, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                          7                           35
  CLUS_2                         10                           42
  CLUS_3                          5                           27
  CLUS_4                          5                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED        7     10     10
  AMP PEAK 18(13Q34) WILD-TYPE     40     46     41
D18V2, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                          7                           40
  CLUS_2                         10                           46
  CLUS_3                         10                           41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       33     35     23
  AMP PEAK 18(13Q34) WILD-TYPE    149    131    130
D18V3, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         33                          149
  CLUS_2                         35                          131
  CLUS_3                         23                          130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       27     23     20
  AMP PEAK 18(13Q34) WILD-TYPE    125     99     73
D18V4, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         27                          125
  CLUS_2                         23                           99
  CLUS_3                         20                           73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       10     15     11
  AMP PEAK 18(13Q34) WILD-TYPE     50     58     50
D18V5, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         10                           50
  CLUS_2                         15                           58
  CLUS_3                         11                           50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(13Q34) MUTATED       10      4     14      8
  AMP PEAK 18(13Q34) WILD-TYPE     44     37     38     39
D18V6, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         10                           44
  CLUS_2                          4                           37
  CLUS_3                         14                           38
  CLUS_4                          8                           39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(13Q34) MUTATED       21     26     32     12
  AMP PEAK 18(13Q34) WILD-TYPE     92    126    122     67
D18V7, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         21                           92
  CLUS_2                         26                          126
  CLUS_3                         32                          122
  CLUS_4                         12                           67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       27     32     32
  AMP PEAK 18(13Q34) WILD-TYPE    151    157     99
D18V8, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         27                          151
  CLUS_2                         32                          157
  CLUS_3                         32                           99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(13Q34) MUTATED       25     32     21      7      1
  AMP PEAK 18(13Q34) WILD-TYPE     96    102    100     55     36
D18V9, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         25                           96
  CLUS_2                         32                          102
  CLUS_3                         21                          100
  CLUS_4                          7                           55
  CLUS_5                          1                           36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(13Q34) MUTATED        8     27     41     10
  AMP PEAK 18(13Q34) WILD-TYPE     81     91    158     59
D18V10, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                          8                           81
  CLUS_2                         27                           91
  CLUS_3                         41                          158
  CLUS_4                         10                           59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       16     25     21
  AMP PEAK 18(13Q34) WILD-TYPE     73    104     95
D18V11, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         16                           73
  CLUS_2                         25                          104
  CLUS_3                         21                           95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(13Q34) MUTATED       10     27     25
  AMP PEAK 18(13Q34) WILD-TYPE     29    124    119
D18V12, multiclass
        clus
vv       AMP PEAK 18(13Q34) MUTATED AMP PEAK 18(13Q34) WILD-TYPE
  CLUS_1                         10                           29
  CLUS_2                         27                          124
  CLUS_3                         25                          119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(14Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(14Q13.3) MUTATED       18     15      8     10
  AMP PEAK 19(14Q13.3) WILD-TYPE     24     37     24     18
D19V1, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           18                             24
  CLUS_2                           15                             37
  CLUS_3                            8                             24
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       23     15     13
  AMP PEAK 19(14Q13.3) WILD-TYPE     24     41     38
D19V2, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           15                             41
  CLUS_3                           13                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       50     52     57
  AMP PEAK 19(14Q13.3) WILD-TYPE    132    114     96
D19V3, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           50                            132
  CLUS_2                           52                            114
  CLUS_3                           57                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       41     43     31
  AMP PEAK 19(14Q13.3) WILD-TYPE    111     79     62
D19V4, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           41                            111
  CLUS_2                           43                             79
  CLUS_3                           31                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       17     26     18
  AMP PEAK 19(14Q13.3) WILD-TYPE     43     47     43
D19V5, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           26                             47
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(14Q13.3) MUTATED       14      8     22     17
  AMP PEAK 19(14Q13.3) WILD-TYPE     40     33     30     30
D19V6, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           14                             40
  CLUS_2                            8                             33
  CLUS_3                           22                             30
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(14Q13.3) MUTATED       44     48     39     28
  AMP PEAK 19(14Q13.3) WILD-TYPE     69    104    115     51
D19V7, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           44                             69
  CLUS_2                           48                            104
  CLUS_3                           39                            115
  CLUS_4                           28                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       73     56     30
  AMP PEAK 19(14Q13.3) WILD-TYPE    105    133    101
D19V8, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           73                            105
  CLUS_2                           56                            133
  CLUS_3                           30                            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(14Q13.3) MUTATED       44     45     42      9     14
  AMP PEAK 19(14Q13.3) WILD-TYPE     77     89     79     53     23
D19V9, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           44                             77
  CLUS_2                           45                             89
  CLUS_3                           42                             79
  CLUS_4                            9                             53
  CLUS_5                           14                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(14Q13.3) MUTATED       20     37     71     26
  AMP PEAK 19(14Q13.3) WILD-TYPE     69     81    128     43
D19V10, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           20                             69
  CLUS_2                           37                             81
  CLUS_3                           71                            128
  CLUS_4                           26                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       31     39     35
  AMP PEAK 19(14Q13.3) WILD-TYPE     58     90     81
D19V11, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           31                             58
  CLUS_2                           39                             90
  CLUS_3                           35                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(14Q13.3) MUTATED       13     45     47
  AMP PEAK 19(14Q13.3) WILD-TYPE     26    106     97
D19V12, multiclass
        clus
vv       AMP PEAK 19(14Q13.3) MUTATED AMP PEAK 19(14Q13.3) WILD-TYPE
  CLUS_1                           13                             26
  CLUS_2                           45                            106
  CLUS_3                           47                             97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(14Q32.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q32.33) MUTATED       20     15      5      9
  AMP PEAK 20(14Q32.33) WILD-TYPE     22     37     27     19
D20V1, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            20                              22
  CLUS_2                            15                              37
  CLUS_3                             5                              27
  CLUS_4                             9                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       22     17     10
  AMP PEAK 20(14Q32.33) WILD-TYPE     25     39     41
D20V2, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            22                              25
  CLUS_2                            17                              39
  CLUS_3                            10                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       40     62     56
  AMP PEAK 20(14Q32.33) WILD-TYPE    142    104     97
D20V3, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            40                             142
  CLUS_2                            62                             104
  CLUS_3                            56                              97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       33     51     35
  AMP PEAK 20(14Q32.33) WILD-TYPE    119     71     58
D20V4, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            33                             119
  CLUS_2                            51                              71
  CLUS_3                            35                              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       14     30     13
  AMP PEAK 20(14Q32.33) WILD-TYPE     46     43     48
D20V5, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            30                              43
  CLUS_3                            13                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q32.33) MUTATED       13     11     20     13
  AMP PEAK 20(14Q32.33) WILD-TYPE     41     30     32     34
D20V6, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            13                              41
  CLUS_2                            11                              30
  CLUS_3                            20                              32
  CLUS_4                            13                              34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q32.33) MUTATED       47     58     36     17
  AMP PEAK 20(14Q32.33) WILD-TYPE     66     94    118     62
D20V7, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            47                              66
  CLUS_2                            58                              94
  CLUS_3                            36                             118
  CLUS_4                            17                              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       66     68     24
  AMP PEAK 20(14Q32.33) WILD-TYPE    112    121    107
D20V8, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            66                             112
  CLUS_2                            68                             121
  CLUS_3                            24                             107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(14Q32.33) MUTATED       39     50     33     18     11
  AMP PEAK 20(14Q32.33) WILD-TYPE     82     84     88     44     26
D20V9, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            39                              82
  CLUS_2                            50                              84
  CLUS_3                            33                              88
  CLUS_4                            18                              44
  CLUS_5                            11                              26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q32.33) MUTATED       30     35     69     17
  AMP PEAK 20(14Q32.33) WILD-TYPE     59     83    130     52
D20V10, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            30                              59
  CLUS_2                            35                              83
  CLUS_3                            69                             130
  CLUS_4                            17                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       26     33     46
  AMP PEAK 20(14Q32.33) WILD-TYPE     63     96     70
D20V11, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            26                              63
  CLUS_2                            33                              96
  CLUS_3                            46                              70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q32.33) MUTATED       15     53     37
  AMP PEAK 20(14Q32.33) WILD-TYPE     24     98    107
D20V12, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            15                              24
  CLUS_2                            53                              98
  CLUS_3                            37                             107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(15Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       15     25     10      9
  AMP PEAK 21(15Q26.3) WILD-TYPE     27     27     22     19
D21V1, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           25                             27
  CLUS_3                           10                             22
  CLUS_4                            9                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       17     28     14
  AMP PEAK 21(15Q26.3) WILD-TYPE     30     28     37
D21V2, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           28                             28
  CLUS_3                           14                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       41     82     56
  AMP PEAK 21(15Q26.3) WILD-TYPE    141     84     97
D21V3, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           41                            141
  CLUS_2                           82                             84
  CLUS_3                           56                             97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       36     56     36
  AMP PEAK 21(15Q26.3) WILD-TYPE    116     66     57
D21V4, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           36                            116
  CLUS_2                           56                             66
  CLUS_3                           36                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       18     27     25
  AMP PEAK 21(15Q26.3) WILD-TYPE     42     46     36
D21V5, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           27                             46
  CLUS_3                           25                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       12     15     19     24
  AMP PEAK 21(15Q26.3) WILD-TYPE     42     26     33     23
D21V6, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           12                             42
  CLUS_2                           15                             26
  CLUS_3                           19                             33
  CLUS_4                           24                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       28     76     49     23
  AMP PEAK 21(15Q26.3) WILD-TYPE     85     76    105     56
D21V7, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           28                             85
  CLUS_2                           76                             76
  CLUS_3                           49                            105
  CLUS_4                           23                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       57     84     35
  AMP PEAK 21(15Q26.3) WILD-TYPE    121    105     96
D21V8, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           57                            121
  CLUS_2                           84                            105
  CLUS_3                           35                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(15Q26.3) MUTATED       40     57     33     29     14
  AMP PEAK 21(15Q26.3) WILD-TYPE     81     77     88     33     23
D21V9, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           40                             81
  CLUS_2                           57                             77
  CLUS_3                           33                             88
  CLUS_4                           29                             33
  CLUS_5                           14                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       44     39     74     16
  AMP PEAK 21(15Q26.3) WILD-TYPE     45     79    125     53
D21V10, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           44                             45
  CLUS_2                           39                             79
  CLUS_3                           74                            125
  CLUS_4                           16                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       19     48     48
  AMP PEAK 21(15Q26.3) WILD-TYPE     70     81     68
D21V11, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           19                             70
  CLUS_2                           48                             81
  CLUS_3                           48                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       12     66     37
  AMP PEAK 21(15Q26.3) WILD-TYPE     27     85    107
D21V12, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                           66                             85
  CLUS_3                           37                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(17Q25.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       20     31      9     19
  AMP PEAK 22(17Q25.1) WILD-TYPE     22     21     23      9
D22V1, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           31                             21
  CLUS_3                            9                             23
  CLUS_4                           19                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       24     34     21
  AMP PEAK 22(17Q25.1) WILD-TYPE     23     22     30
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           34                             22
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       54    112     70
  AMP PEAK 22(17Q25.1) WILD-TYPE    128     54     83
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           54                            128
  CLUS_2                          112                             54
  CLUS_3                           70                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       47     76     44
  AMP PEAK 22(17Q25.1) WILD-TYPE    105     46     49
D22V4, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           47                            105
  CLUS_2                           76                             46
  CLUS_3                           44                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       31     32     24
  AMP PEAK 22(17Q25.1) WILD-TYPE     29     41     37
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           32                             41
  CLUS_3                           24                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       22     16     24     25
  AMP PEAK 22(17Q25.1) WILD-TYPE     32     25     28     22
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           16                             25
  CLUS_3                           24                             28
  CLUS_4                           25                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       41     97     70     26
  AMP PEAK 22(17Q25.1) WILD-TYPE     72     55     84     53
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           41                             72
  CLUS_2                           97                             55
  CLUS_3                           70                             84
  CLUS_4                           26                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       67    115     52
  AMP PEAK 22(17Q25.1) WILD-TYPE    111     74     79
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           67                            111
  CLUS_2                          115                             74
  CLUS_3                           52                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(17Q25.1) MUTATED       62     78     38     26     19
  AMP PEAK 22(17Q25.1) WILD-TYPE     59     56     83     36     18
D22V9, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           62                             59
  CLUS_2                           78                             56
  CLUS_3                           38                             83
  CLUS_4                           26                             36
  CLUS_5                           19                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       53     51     97     22
  AMP PEAK 22(17Q25.1) WILD-TYPE     36     67    102     47
D22V10, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           53                             36
  CLUS_2                           51                             67
  CLUS_3                           97                            102
  CLUS_4                           22                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       27     63     64
  AMP PEAK 22(17Q25.1) WILD-TYPE     62     66     52
D22V11, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           27                             62
  CLUS_2                           63                             66
  CLUS_3                           64                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       14     88     52
  AMP PEAK 22(17Q25.1) WILD-TYPE     25     63     92
D22V12, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           14                             25
  CLUS_2                           88                             63
  CLUS_3                           52                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       13     27      8      8
  AMP PEAK 23(18P11.32) WILD-TYPE     29     25     24     20
D23V1, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              29
  CLUS_2                            27                              25
  CLUS_3                             8                              24
  CLUS_4                             8                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       13     30     13
  AMP PEAK 23(18P11.32) WILD-TYPE     34     26     38
D23V2, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            30                              26
  CLUS_3                            13                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       38     81     60
  AMP PEAK 23(18P11.32) WILD-TYPE    144     85     93
D23V3, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            38                             144
  CLUS_2                            81                              85
  CLUS_3                            60                              93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       33     55     44
  AMP PEAK 23(18P11.32) WILD-TYPE    119     67     49
D23V4, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            33                             119
  CLUS_2                            55                              67
  CLUS_3                            44                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       26     28     20
  AMP PEAK 23(18P11.32) WILD-TYPE     34     45     41
D23V5, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            28                              45
  CLUS_3                            20                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       21     15     19     19
  AMP PEAK 23(18P11.32) WILD-TYPE     33     26     33     28
D23V6, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            21                              33
  CLUS_2                            15                              26
  CLUS_3                            19                              33
  CLUS_4                            19                              28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       37     68     51     22
  AMP PEAK 23(18P11.32) WILD-TYPE     76     84    103     57
D23V7, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            37                              76
  CLUS_2                            68                              84
  CLUS_3                            51                             103
  CLUS_4                            22                              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       50     86     42
  AMP PEAK 23(18P11.32) WILD-TYPE    128    103     89
D23V8, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            50                             128
  CLUS_2                            86                             103
  CLUS_3                            42                              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(18P11.32) MUTATED       42     58     30     24     17
  AMP PEAK 23(18P11.32) WILD-TYPE     79     76     91     38     20
D23V9, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            42                              79
  CLUS_2                            58                              76
  CLUS_3                            30                              91
  CLUS_4                            24                              38
  CLUS_5                            17                              20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       36     39     79     17
  AMP PEAK 23(18P11.32) WILD-TYPE     53     79    120     52
D23V10, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            36                              53
  CLUS_2                            39                              79
  CLUS_3                            79                             120
  CLUS_4                            17                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       23     48     47
  AMP PEAK 23(18P11.32) WILD-TYPE     66     81     69
D23V11, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            23                              66
  CLUS_2                            48                              81
  CLUS_3                            47                              69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       11     71     36
  AMP PEAK 23(18P11.32) WILD-TYPE     28     80    108
D23V12, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            11                              28
  CLUS_2                            71                              80
  CLUS_3                            36                             108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        8     25      5     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     34     27     27     13
D24V1, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           25                             27
  CLUS_3                            5                             27
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       10     27     16
  AMP PEAK 24(18Q11.2) WILD-TYPE     37     29     35
D24V2, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           27                             29
  CLUS_3                           16                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       30     76     45
  AMP PEAK 24(18Q11.2) WILD-TYPE    152     90    108
D24V3, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           30                            152
  CLUS_2                           76                             90
  CLUS_3                           45                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       26     52     29
  AMP PEAK 24(18Q11.2) WILD-TYPE    126     70     64
D24V4, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           26                            126
  CLUS_2                           52                             70
  CLUS_3                           29                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       24     22     16
  AMP PEAK 24(18Q11.2) WILD-TYPE     36     51     45
D24V5, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           24                             36
  CLUS_2                           22                             51
  CLUS_3                           16                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       20     13     14     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     34     28     38     32
D24V6, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           20                             34
  CLUS_2                           13                             28
  CLUS_3                           14                             38
  CLUS_4                           15                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       26     64     51      9
  AMP PEAK 24(18Q11.2) WILD-TYPE     87     88    103     70
D24V7, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           26                             87
  CLUS_2                           64                             88
  CLUS_3                           51                            103
  CLUS_4                            9                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       35     77     38
  AMP PEAK 24(18Q11.2) WILD-TYPE    143    112     93
D24V8, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           35                            143
  CLUS_2                           77                            112
  CLUS_3                           38                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(18Q11.2) MUTATED       38     47     22     24     12
  AMP PEAK 24(18Q11.2) WILD-TYPE     83     87     99     38     25
D24V9, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           38                             83
  CLUS_2                           47                             87
  CLUS_3                           22                             99
  CLUS_4                           24                             38
  CLUS_5                           12                             25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       38     32     62     11
  AMP PEAK 24(18Q11.2) WILD-TYPE     51     86    137     58
D24V10, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           32                             86
  CLUS_3                           62                            137
  CLUS_4                           11                             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       17     37     40
  AMP PEAK 24(18Q11.2) WILD-TYPE     72     92     76
D24V11, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           17                             72
  CLUS_2                           37                             92
  CLUS_3                           40                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED        7     61     26
  AMP PEAK 24(18Q11.2) WILD-TYPE     32     90    118
D24V12, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            7                             32
  CLUS_2                           61                             90
  CLUS_3                           26                            118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       16     27     11     13
  AMP PEAK 25(19Q12) WILD-TYPE     26     25     21     15
D25V1, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         16                           26
  CLUS_2                         27                           25
  CLUS_3                         11                           21
  CLUS_4                         13                           15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       20     27     20
  AMP PEAK 25(19Q12) WILD-TYPE     27     29     31
D25V2, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         20                           27
  CLUS_2                         27                           29
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       56    106     62
  AMP PEAK 25(19Q12) WILD-TYPE    126     60     91
D25V3, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         56                          126
  CLUS_2                        106                           60
  CLUS_3                         62                           91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       61     69     40
  AMP PEAK 25(19Q12) WILD-TYPE     91     53     53
D25V4, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         61                           91
  CLUS_2                         69                           53
  CLUS_3                         40                           53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       32     28     28
  AMP PEAK 25(19Q12) WILD-TYPE     28     45     33
D25V5, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         32                           28
  CLUS_2                         28                           45
  CLUS_3                         28                           33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       28     14     23     23
  AMP PEAK 25(19Q12) WILD-TYPE     26     27     29     24
D25V6, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         28                           26
  CLUS_2                         14                           27
  CLUS_3                         23                           29
  CLUS_4                         23                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       37     83     72     30
  AMP PEAK 25(19Q12) WILD-TYPE     76     69     82     49
D25V7, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         37                           76
  CLUS_2                         83                           69
  CLUS_3                         72                           82
  CLUS_4                         30                           49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       66     96     60
  AMP PEAK 25(19Q12) WILD-TYPE    112     93     71
D25V8, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         66                          112
  CLUS_2                         96                           93
  CLUS_3                         60                           71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(19Q12) MUTATED       55     63     49     30     19
  AMP PEAK 25(19Q12) WILD-TYPE     66     71     72     32     18
D25V9, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         55                           66
  CLUS_2                         63                           71
  CLUS_3                         49                           72
  CLUS_4                         30                           32
  CLUS_5                         19                           18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       45     54     90     27
  AMP PEAK 25(19Q12) WILD-TYPE     44     64    109     42
D25V10, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         45                           44
  CLUS_2                         54                           64
  CLUS_3                         90                          109
  CLUS_4                         27                           42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       35     50     66
  AMP PEAK 25(19Q12) WILD-TYPE     54     79     50
D25V11, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         35                           54
  CLUS_2                         50                           79
  CLUS_3                         66                           50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       18     83     50
  AMP PEAK 25(19Q12) WILD-TYPE     21     68     94
D25V12, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         18                           21
  CLUS_2                         83                           68
  CLUS_3                         50                           94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(19Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       21     28     11     12
  AMP PEAK 26(19Q13.2) WILD-TYPE     21     24     21     16
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           28                             24
  CLUS_3                           11                             21
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       24     29     19
  AMP PEAK 26(19Q13.2) WILD-TYPE     23     27     32
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           29                             27
  CLUS_3                           19                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       60    107     67
  AMP PEAK 26(19Q13.2) WILD-TYPE    122     59     86
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           60                            122
  CLUS_2                          107                             59
  CLUS_3                           67                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       64     70     40
  AMP PEAK 26(19Q13.2) WILD-TYPE     88     52     53
D26V4, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           64                             88
  CLUS_2                           70                             52
  CLUS_3                           40                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       32     30     28
  AMP PEAK 26(19Q13.2) WILD-TYPE     28     43     33
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           30                             43
  CLUS_3                           28                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       27     16     22     25
  AMP PEAK 26(19Q13.2) WILD-TYPE     27     25     30     22
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           27                             27
  CLUS_2                           16                             25
  CLUS_3                           22                             30
  CLUS_4                           25                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       39     85     74     33
  AMP PEAK 26(19Q13.2) WILD-TYPE     74     67     80     46
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           39                             74
  CLUS_2                           85                             67
  CLUS_3                           74                             80
  CLUS_4                           33                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       71     97     63
  AMP PEAK 26(19Q13.2) WILD-TYPE    107     92     68
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           71                            107
  CLUS_2                           97                             92
  CLUS_3                           63                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(19Q13.2) MUTATED       60     65     52     32     18
  AMP PEAK 26(19Q13.2) WILD-TYPE     61     69     69     30     19
D26V9, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           60                             61
  CLUS_2                           65                             69
  CLUS_3                           52                             69
  CLUS_4                           32                             30
  CLUS_5                           18                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       47     53     98     29
  AMP PEAK 26(19Q13.2) WILD-TYPE     42     65    101     40
D26V10, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           47                             42
  CLUS_2                           53                             65
  CLUS_3                           98                            101
  CLUS_4                           29                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       40     52     66
  AMP PEAK 26(19Q13.2) WILD-TYPE     49     77     50
D26V11, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           40                             49
  CLUS_2                           52                             77
  CLUS_3                           66                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       20     83     55
  AMP PEAK 26(19Q13.2) WILD-TYPE     19     68     89
D26V12, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           20                             19
  CLUS_2                           83                             68
  CLUS_3                           55                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(20P12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       23     37      9     12
  AMP PEAK 27(20P12.2) WILD-TYPE     19     15     23     16
D27V1, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           23                             19
  CLUS_2                           37                             15
  CLUS_3                            9                             23
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       27     37     17
  AMP PEAK 27(20P12.2) WILD-TYPE     20     19     34
D27V2, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           27                             20
  CLUS_2                           37                             19
  CLUS_3                           17                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       70    119     91
  AMP PEAK 27(20P12.2) WILD-TYPE    112     47     62
D27V3, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           70                            112
  CLUS_2                          119                             47
  CLUS_3                           91                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       74     87     49
  AMP PEAK 27(20P12.2) WILD-TYPE     78     35     44
D27V4, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           74                             78
  CLUS_2                           87                             35
  CLUS_3                           49                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       31     40     34
  AMP PEAK 27(20P12.2) WILD-TYPE     29     33     27
D27V5, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           40                             33
  CLUS_3                           34                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       26     19     32     28
  AMP PEAK 27(20P12.2) WILD-TYPE     28     22     20     19
D27V6, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           26                             28
  CLUS_2                           19                             22
  CLUS_3                           32                             20
  CLUS_4                           28                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       56    101     82     40
  AMP PEAK 27(20P12.2) WILD-TYPE     57     51     72     39
D27V7, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           56                             57
  CLUS_2                          101                             51
  CLUS_3                           82                             72
  CLUS_4                           40                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       94    121     64
  AMP PEAK 27(20P12.2) WILD-TYPE     84     68     67
D27V8, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           94                             84
  CLUS_2                          121                             68
  CLUS_3                           64                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(20P12.2) MUTATED       57     82     64     37     25
  AMP PEAK 27(20P12.2) WILD-TYPE     64     52     57     25     12
D27V9, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           57                             64
  CLUS_2                           82                             52
  CLUS_3                           64                             57
  CLUS_4                           37                             25
  CLUS_5                           25                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       54     61    111     39
  AMP PEAK 27(20P12.2) WILD-TYPE     35     57     88     30
D27V10, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           54                             35
  CLUS_2                           61                             57
  CLUS_3                          111                             88
  CLUS_4                           39                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       48     74     71
  AMP PEAK 27(20P12.2) WILD-TYPE     41     55     45
D27V11, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           48                             41
  CLUS_2                           74                             55
  CLUS_3                           71                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       24     91     78
  AMP PEAK 27(20P12.2) WILD-TYPE     15     60     66
D27V12, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           24                             15
  CLUS_2                           91                             60
  CLUS_3                           78                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       26     30     17     18
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     22     15     10
D28V1, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            26                              16
  CLUS_2                            30                              22
  CLUS_3                            17                              15
  CLUS_4                            18                              10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       31     31     29
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     25     22
D28V2, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            31                              16
  CLUS_2                            31                              25
  CLUS_3                            29                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       82    114    110
  AMP PEAK 28(20Q11.21) WILD-TYPE    100     52     43
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            82                             100
  CLUS_2                           114                              52
  CLUS_3                           110                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       80     87     58
  AMP PEAK 28(20Q11.21) WILD-TYPE     72     35     35
D28V4, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            80                              72
  CLUS_2                            87                              35
  CLUS_3                            58                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       35     45     34
  AMP PEAK 28(20Q11.21) WILD-TYPE     25     28     27
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            45                              28
  CLUS_3                            34                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       32     21     32     29
  AMP PEAK 28(20Q11.21) WILD-TYPE     22     20     20     18
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            32                              22
  CLUS_2                            21                              20
  CLUS_3                            32                              20
  CLUS_4                            29                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       65     95     98     45
  AMP PEAK 28(20Q11.21) WILD-TYPE     48     57     56     34
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            65                              48
  CLUS_2                            95                              57
  CLUS_3                            98                              56
  CLUS_4                            45                              34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED      109    116     78
  AMP PEAK 28(20Q11.21) WILD-TYPE     69     73     53
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           109                              69
  CLUS_2                           116                              73
  CLUS_3                            78                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(20Q11.21) MUTATED       68     90     71     36     26
  AMP PEAK 28(20Q11.21) WILD-TYPE     53     44     50     26     11
D28V9, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            68                              53
  CLUS_2                            90                              44
  CLUS_3                            71                              50
  CLUS_4                            36                              26
  CLUS_5                            26                              11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       52     69    131     39
  AMP PEAK 28(20Q11.21) WILD-TYPE     37     49     68     30
D28V10, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            52                              37
  CLUS_2                            69                              49
  CLUS_3                           131                              68
  CLUS_4                            39                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       53     77     76
  AMP PEAK 28(20Q11.21) WILD-TYPE     36     52     40
D28V11, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            53                              36
  CLUS_2                            77                              52
  CLUS_3                            76                              40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       28     96     82
  AMP PEAK 28(20Q11.21) WILD-TYPE     11     55     62
D28V12, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            28                              11
  CLUS_2                            96                              55
  CLUS_3                            82                              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       23     31     11     12
  AMP PEAK 29(22Q11.21) WILD-TYPE     19     21     21     16
D29V1, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            23                              19
  CLUS_2                            31                              21
  CLUS_3                            11                              21
  CLUS_4                            12                              16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       25     32     20
  AMP PEAK 29(22Q11.21) WILD-TYPE     22     24     31
D29V2, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            25                              22
  CLUS_2                            32                              24
  CLUS_3                            20                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       71    100     85
  AMP PEAK 29(22Q11.21) WILD-TYPE    111     66     68
D29V3, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            71                             111
  CLUS_2                           100                              66
  CLUS_3                            85                              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       62     79     51
  AMP PEAK 29(22Q11.21) WILD-TYPE     90     43     42
D29V4, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            62                              90
  CLUS_2                            79                              43
  CLUS_3                            51                              42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       30     40     31
  AMP PEAK 29(22Q11.21) WILD-TYPE     30     33     30
D29V5, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            30                              30
  CLUS_2                            40                              33
  CLUS_3                            31                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       24     23     28     26
  AMP PEAK 29(22Q11.21) WILD-TYPE     30     18     24     21
D29V6, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            24                              30
  CLUS_2                            23                              18
  CLUS_3                            28                              24
  CLUS_4                            26                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       55    100     68     31
  AMP PEAK 29(22Q11.21) WILD-TYPE     58     52     86     48
D29V7, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            55                              58
  CLUS_2                           100                              52
  CLUS_3                            68                              86
  CLUS_4                            31                              48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       97    110     47
  AMP PEAK 29(22Q11.21) WILD-TYPE     81     79     84
D29V8, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            97                              81
  CLUS_2                           110                              79
  CLUS_3                            47                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(22Q11.21) MUTATED       58     81     56     30     19
  AMP PEAK 29(22Q11.21) WILD-TYPE     63     53     65     32     18
D29V9, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            58                              63
  CLUS_2                            81                              53
  CLUS_3                            56                              65
  CLUS_4                            30                              32
  CLUS_5                            19                              18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       48     55    114     27
  AMP PEAK 29(22Q11.21) WILD-TYPE     41     63     85     42
D29V10, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            48                              41
  CLUS_2                            55                              63
  CLUS_3                           114                              85
  CLUS_4                            27                              42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       47     61     62
  AMP PEAK 29(22Q11.21) WILD-TYPE     42     68     54
D29V11, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            47                              42
  CLUS_2                            61                              68
  CLUS_3                            62                              54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       21     83     66
  AMP PEAK 29(22Q11.21) WILD-TYPE     18     68     78
D29V12, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            21                              18
  CLUS_2                            83                              68
  CLUS_3                            66                              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       10     15      7      8
  AMP PEAK 30(XQ28) WILD-TYPE     32     37     25     20
D30V1, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        10                          32
  CLUS_2                        15                          37
  CLUS_3                         7                          25
  CLUS_4                         8                          20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       12     16     12
  AMP PEAK 30(XQ28) WILD-TYPE     35     40     39
D30V2, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        12                          35
  CLUS_2                        16                          40
  CLUS_3                        12                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       34     54     36
  AMP PEAK 30(XQ28) WILD-TYPE    148    112    117
D30V3, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        34                         148
  CLUS_2                        54                         112
  CLUS_3                        36                         117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       28     39     23
  AMP PEAK 30(XQ28) WILD-TYPE    124     83     70
D30V4, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        28                         124
  CLUS_2                        39                          83
  CLUS_3                        23                          70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       14     26     10
  AMP PEAK 30(XQ28) WILD-TYPE     46     47     51
D30V5, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        14                          46
  CLUS_2                        26                          47
  CLUS_3                        10                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       11     11     20      8
  AMP PEAK 30(XQ28) WILD-TYPE     43     30     32     39
D30V6, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        11                          43
  CLUS_2                        11                          30
  CLUS_3                        20                          32
  CLUS_4                         8                          39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       19     48     36     18
  AMP PEAK 30(XQ28) WILD-TYPE     94    104    118     61
D30V7, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        19                          94
  CLUS_2                        48                         104
  CLUS_3                        36                         118
  CLUS_4                        18                          61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       38     53     30
  AMP PEAK 30(XQ28) WILD-TYPE    140    136    101
D30V8, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        38                         140
  CLUS_2                        53                         136
  CLUS_3                        30                         101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(XQ28) MUTATED       31     38     21     18     11
  AMP PEAK 30(XQ28) WILD-TYPE     90     96    100     44     26
D30V9, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        31                          90
  CLUS_2                        38                          96
  CLUS_3                        21                         100
  CLUS_4                        18                          44
  CLUS_5                        11                          26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       28     29     51     11
  AMP PEAK 30(XQ28) WILD-TYPE     61     89    148     58
D30V10, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        28                          61
  CLUS_2                        29                          89
  CLUS_3                        51                         148
  CLUS_4                        11                          58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       17     25     39
  AMP PEAK 30(XQ28) WILD-TYPE     72    104     77
D30V11, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        17                          72
  CLUS_2                        25                         104
  CLUS_3                        39                          77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       12     44     25
  AMP PEAK 30(XQ28) WILD-TYPE     27    107    119
D30V12, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        12                          27
  CLUS_2                        44                         107
  CLUS_3                        25                         119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       12     39     13     10
  DEL PEAK  1(1P36.11) WILD-TYPE     30     13     19     18
D31V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           12                             30
  CLUS_2                           39                             13
  CLUS_3                           13                             19
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       14     43     17
  DEL PEAK  1(1P36.11) WILD-TYPE     33     13     34
D31V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           14                             33
  CLUS_2                           43                             13
  CLUS_3                           17                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       45    138     45
  DEL PEAK  1(1P36.11) WILD-TYPE    137     28    108
D31V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           45                            137
  CLUS_2                          138                             28
  CLUS_3                           45                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       30     96     35
  DEL PEAK  1(1P36.11) WILD-TYPE    122     26     58
D31V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           30                            122
  CLUS_2                           96                             26
  CLUS_3                           35                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       33     25     28
  DEL PEAK  1(1P36.11) WILD-TYPE     27     48     33
D31V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           25                             48
  CLUS_3                           28                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       26     15     15     30
  DEL PEAK  1(1P36.11) WILD-TYPE     28     26     37     17
D31V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           26                             28
  CLUS_2                           15                             26
  CLUS_3                           15                             37
  CLUS_4                           30                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       32    120     52     23
  DEL PEAK  1(1P36.11) WILD-TYPE     81     32    102     56
D31V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           32                             81
  CLUS_2                          120                             32
  CLUS_3                           52                            102
  CLUS_4                           23                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       46    140     41
  DEL PEAK  1(1P36.11) WILD-TYPE    132     49     90
D31V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           46                            132
  CLUS_2                          140                             49
  CLUS_3                           41                             90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       57     74     31     43     11
  DEL PEAK  1(1P36.11) WILD-TYPE     64     60     90     19     26
D31V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           57                             64
  CLUS_2                           74                             60
  CLUS_3                           31                             90
  CLUS_4                           43                             19
  CLUS_5                           11                             26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       66     52     83     15
  DEL PEAK  1(1P36.11) WILD-TYPE     23     66    116     54
D31V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           66                             23
  CLUS_2                           52                             66
  CLUS_3                           83                            116
  CLUS_4                           15                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       21     56     67
  DEL PEAK  1(1P36.11) WILD-TYPE     68     73     49
D31V11, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           21                             68
  CLUS_2                           56                             73
  CLUS_3                           67                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED        9     90     45
  DEL PEAK  1(1P36.11) WILD-TYPE     30     61     99
D31V12, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            9                             30
  CLUS_2                           90                             61
  CLUS_3                           45                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  2(1P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       17     37      9      9
  DEL PEAK  2(1P13.1) WILD-TYPE     25     15     23     19
D32V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          17                            25
  CLUS_2                          37                            15
  CLUS_3                           9                            23
  CLUS_4                           9                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       19     39     14
  DEL PEAK  2(1P13.1) WILD-TYPE     28     17     37
D32V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          19                            28
  CLUS_2                          39                            17
  CLUS_3                          14                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       47    124     50
  DEL PEAK  2(1P13.1) WILD-TYPE    135     42    103
D32V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          47                           135
  CLUS_2                         124                            42
  CLUS_3                          50                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       40     83     34
  DEL PEAK  2(1P13.1) WILD-TYPE    112     39     59
D32V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          40                           112
  CLUS_2                          83                            39
  CLUS_3                          34                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       35     26     24
  DEL PEAK  2(1P13.1) WILD-TYPE     25     47     37
D32V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          26                            47
  CLUS_3                          24                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       25     15     19     26
  DEL PEAK  2(1P13.1) WILD-TYPE     29     26     33     21
D32V6, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          25                            29
  CLUS_2                          15                            26
  CLUS_3                          19                            33
  CLUS_4                          26                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       34    107     55     24
  DEL PEAK  2(1P13.1) WILD-TYPE     79     45     99     55
D32V7, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          34                            79
  CLUS_2                         107                            45
  CLUS_3                          55                            99
  CLUS_4                          24                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       48    125     47
  DEL PEAK  2(1P13.1) WILD-TYPE    130     64     84
D32V8, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          48                           130
  CLUS_2                         125                            64
  CLUS_3                          47                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.1) MUTATED       51     70     28     44     17
  DEL PEAK  2(1P13.1) WILD-TYPE     70     64     93     18     20
D32V9, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          51                            70
  CLUS_2                          70                            64
  CLUS_3                          28                            93
  CLUS_4                          44                            18
  CLUS_5                          17                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       62     53     79     16
  DEL PEAK  2(1P13.1) WILD-TYPE     27     65    120     53
D32V10, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          62                            27
  CLUS_2                          53                            65
  CLUS_3                          79                           120
  CLUS_4                          16                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       23     57     62
  DEL PEAK  2(1P13.1) WILD-TYPE     66     72     54
D32V11, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          23                            66
  CLUS_2                          57                            72
  CLUS_3                          62                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       10     88     44
  DEL PEAK  2(1P13.1) WILD-TYPE     29     63    100
D32V12, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                          88                            63
  CLUS_3                          44                           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  3(2P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        7      5      1      6
  DEL PEAK  3(2P25.3) WILD-TYPE     35     47     31     22
D33V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                           5                            47
  CLUS_3                           1                            31
  CLUS_4                           6                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        8      5      6
  DEL PEAK  3(2P25.3) WILD-TYPE     39     51     45
D33V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            39
  CLUS_2                           5                            51
  CLUS_3                           6                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       12     17     21
  DEL PEAK  3(2P25.3) WILD-TYPE    170    149    132
D33V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          12                           170
  CLUS_2                          17                           149
  CLUS_3                          21                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       11     11     13
  DEL PEAK  3(2P25.3) WILD-TYPE    141    111     80
D33V4, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          11                           141
  CLUS_2                          11                           111
  CLUS_3                          13                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        8      7      3
  DEL PEAK  3(2P25.3) WILD-TYPE     52     66     58
D33V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           7                            66
  CLUS_3                           3                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        6      1      6      5
  DEL PEAK  3(2P25.3) WILD-TYPE     48     40     46     42
D33V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            48
  CLUS_2                           1                            40
  CLUS_3                           6                            46
  CLUS_4                           5                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED       13     13     18      6
  DEL PEAK  3(2P25.3) WILD-TYPE    100    139    136     73
D33V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          13                           100
  CLUS_2                          13                           139
  CLUS_3                          18                           136
  CLUS_4                           6                            73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       17     17     16
  DEL PEAK  3(2P25.3) WILD-TYPE    161    172    115
D33V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          17                           161
  CLUS_2                          17                           172
  CLUS_3                          16                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2P25.3) MUTATED       18     19      4      4      3
  DEL PEAK  3(2P25.3) WILD-TYPE    103    115    117     58     34
D33V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          18                           103
  CLUS_2                          19                           115
  CLUS_3                           4                           117
  CLUS_4                           4                            58
  CLUS_5                           3                            34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        9     13     23      3
  DEL PEAK  3(2P25.3) WILD-TYPE     80    105    176     66
D33V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           9                            80
  CLUS_2                          13                           105
  CLUS_3                          23                           176
  CLUS_4                           3                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        3     11     15
  DEL PEAK  3(2P25.3) WILD-TYPE     86    118    101
D33V11, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           3                            86
  CLUS_2                          11                           118
  CLUS_3                          15                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        2     20      7
  DEL PEAK  3(2P25.3) WILD-TYPE     37    131    137
D33V12, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           2                            37
  CLUS_2                          20                           131
  CLUS_3                           7                           137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       10     18      6     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     32     34     26     18
D34V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           6                            26
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       12     20     12
  DEL PEAK  4(2Q22.1) WILD-TYPE     35     36     39
D34V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          20                            36
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       26     64     41
  DEL PEAK  4(2Q22.1) WILD-TYPE    156    102    112
D34V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          26                           156
  CLUS_2                          64                           102
  CLUS_3                          41                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       23     42     27
  DEL PEAK  4(2Q22.1) WILD-TYPE    129     80     66
D34V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          23                           129
  CLUS_2                          42                            80
  CLUS_3                          27                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       14     19     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     46     54     51
D34V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          19                            54
  CLUS_3                          10                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       11      6     15     11
  DEL PEAK  4(2Q22.1) WILD-TYPE     43     35     37     36
D34V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            43
  CLUS_2                           6                            35
  CLUS_3                          15                            37
  CLUS_4                          11                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       24     50     47     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     89    102    107     69
D34V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          24                            89
  CLUS_2                          50                           102
  CLUS_3                          47                           107
  CLUS_4                          10                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       33     62     36
  DEL PEAK  4(2Q22.1) WILD-TYPE    145    127     95
D34V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          33                           145
  CLUS_2                          62                           127
  CLUS_3                          36                            95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q22.1) MUTATED       37     48     16     20      6
  DEL PEAK  4(2Q22.1) WILD-TYPE     84     86    105     42     31
D34V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          37                            84
  CLUS_2                          48                            86
  CLUS_3                          16                           105
  CLUS_4                          20                            42
  CLUS_5                           6                            31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       35     38     45      9
  DEL PEAK  4(2Q22.1) WILD-TYPE     54     80    154     60
D34V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          35                            54
  CLUS_2                          38                            80
  CLUS_3                          45                           154
  CLUS_4                           9                            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       13     39     33
  DEL PEAK  4(2Q22.1) WILD-TYPE     76     90     83
D34V11, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          13                            76
  CLUS_2                          39                            90
  CLUS_3                          33                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        9     49     27
  DEL PEAK  4(2Q22.1) WILD-TYPE     30    102    117
D34V12, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          49                           102
  CLUS_3                          27                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  5(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED        7     26      7     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     35     26     25     18
D35V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          26                            26
  CLUS_3                           7                            25
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       11     29     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     36     27     41
D35V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          29                            27
  CLUS_3                          10                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       33     85     41
  DEL PEAK  5(2Q37.1) WILD-TYPE    149     81    112
D35V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          33                           149
  CLUS_2                          85                            81
  CLUS_3                          41                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       27     60     33
  DEL PEAK  5(2Q37.1) WILD-TYPE    125     62     60
D35V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          27                           125
  CLUS_2                          60                            62
  CLUS_3                          33                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       22     19     17
  DEL PEAK  5(2Q37.1) WILD-TYPE     38     54     44
D35V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          19                            54
  CLUS_3                          17                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       14     15     11     18
  DEL PEAK  5(2Q37.1) WILD-TYPE     40     26     41     29
D35V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          14                            40
  CLUS_2                          15                            26
  CLUS_3                          11                            41
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       33     72     43     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     80     80    111     69
D35V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          33                            80
  CLUS_2                          72                            80
  CLUS_3                          43                           111
  CLUS_4                          10                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       38     88     32
  DEL PEAK  5(2Q37.1) WILD-TYPE    140    101     99
D35V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          38                           140
  CLUS_2                          88                           101
  CLUS_3                          32                            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q37.1) MUTATED       38     70     17     21      7
  DEL PEAK  5(2Q37.1) WILD-TYPE     83     64    104     41     30
D35V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          38                            83
  CLUS_2                          70                            64
  CLUS_3                          17                           104
  CLUS_4                          21                            41
  CLUS_5                           7                            30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       34     54     56      9
  DEL PEAK  5(2Q37.1) WILD-TYPE     55     64    143     60
D35V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          34                            55
  CLUS_2                          54                            64
  CLUS_3                          56                           143
  CLUS_4                           9                            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       11     45     50
  DEL PEAK  5(2Q37.1) WILD-TYPE     78     84     66
D35V11, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          11                            78
  CLUS_2                          45                            84
  CLUS_3                          50                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED        4     69     33
  DEL PEAK  5(2Q37.1) WILD-TYPE     35     82    111
D35V12, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           4                            35
  CLUS_2                          69                            82
  CLUS_3                          33                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  6(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       31     45     24     23
  DEL PEAK  6(3P25.3) WILD-TYPE     11      7      8      5
D36V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          45                             7
  CLUS_3                          24                             8
  CLUS_4                          23                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       36     49     38
  DEL PEAK  6(3P25.3) WILD-TYPE     11      7     13
D36V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          49                             7
  CLUS_3                          38                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      133    146    119
  DEL PEAK  6(3P25.3) WILD-TYPE     49     20     34
D36V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         133                            49
  CLUS_2                         146                            20
  CLUS_3                         119                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      105    109     78
  DEL PEAK  6(3P25.3) WILD-TYPE     47     13     15
D36V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         105                            47
  CLUS_2                         109                            13
  CLUS_3                          78                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       46     57     49
  DEL PEAK  6(3P25.3) WILD-TYPE     14     16     12
D36V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          57                            16
  CLUS_3                          49                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       41     28     43     40
  DEL PEAK  6(3P25.3) WILD-TYPE     13     13      9      7
D36V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          41                            13
  CLUS_2                          28                            13
  CLUS_3                          43                             9
  CLUS_4                          40                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       87    133    123     53
  DEL PEAK  6(3P25.3) WILD-TYPE     26     19     31     26
D36V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          87                            26
  CLUS_2                         133                            19
  CLUS_3                         123                            31
  CLUS_4                          53                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      141    165     90
  DEL PEAK  6(3P25.3) WILD-TYPE     37     24     41
D36V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         141                            37
  CLUS_2                         165                            24
  CLUS_3                          90                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P25.3) MUTATED       94    116     83     52     31
  DEL PEAK  6(3P25.3) WILD-TYPE     27     18     38     10      6
D36V9, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          94                            27
  CLUS_2                         116                            18
  CLUS_3                          83                            38
  CLUS_4                          52                            10
  CLUS_5                          31                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       76     94    166     40
  DEL PEAK  6(3P25.3) WILD-TYPE     13     24     33     29
D36V10, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          76                            13
  CLUS_2                          94                            24
  CLUS_3                         166                            33
  CLUS_4                          40                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       62    103    100
  DEL PEAK  6(3P25.3) WILD-TYPE     27     26     16
D36V11, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          62                            27
  CLUS_2                         103                            26
  CLUS_3                         100                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       32    127    106
  DEL PEAK  6(3P25.3) WILD-TYPE      7     24     38
D36V12, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          32                             7
  CLUS_2                         127                            24
  CLUS_3                         106                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  7(3P13) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       38     46     24     25
  DEL PEAK  7(3P13) WILD-TYPE      4      6      8      3
D37V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        38                           4
  CLUS_2                        46                           6
  CLUS_3                        24                           8
  CLUS_4                        25                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       42     50     41
  DEL PEAK  7(3P13) WILD-TYPE      5      6     10
D37V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        42                           5
  CLUS_2                        50                           6
  CLUS_3                        41                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      136    157    141
  DEL PEAK  7(3P13) WILD-TYPE     46      9     12
D37V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       136                          46
  CLUS_2                       157                           9
  CLUS_3                       141                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      117    116     85
  DEL PEAK  7(3P13) WILD-TYPE     35      6      8
D37V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       117                          35
  CLUS_2                       116                           6
  CLUS_3                        85                           8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       53     63     51
  DEL PEAK  7(3P13) WILD-TYPE      7     10     10
D37V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        53                           7
  CLUS_2                        63                          10
  CLUS_3                        51                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       48     27     49     43
  DEL PEAK  7(3P13) WILD-TYPE      6     14      3      4
D37V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        48                           6
  CLUS_2                        27                          14
  CLUS_3                        49                           3
  CLUS_4                        43                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED      101    140    133     57
  DEL PEAK  7(3P13) WILD-TYPE     12     12     21     22
D37V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       101                          12
  CLUS_2                       140                          12
  CLUS_3                       133                          21
  CLUS_4                        57                          22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      154    175    102
  DEL PEAK  7(3P13) WILD-TYPE     24     14     29
D37V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       154                          24
  CLUS_2                       175                          14
  CLUS_3                       102                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P13) MUTATED      105    125     92     56     33
  DEL PEAK  7(3P13) WILD-TYPE     16      9     29      6      4
D37V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       105                          16
  CLUS_2                       125                           9
  CLUS_3                        92                          29
  CLUS_4                        56                           6
  CLUS_5                        33                           4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       79    104    185     43
  DEL PEAK  7(3P13) WILD-TYPE     10     14     14     26
D37V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        79                          10
  CLUS_2                       104                          14
  CLUS_3                       185                          14
  CLUS_4                        43                          26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       67    116    108
  DEL PEAK  7(3P13) WILD-TYPE     22     13      8
D37V11, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        67                          22
  CLUS_2                       116                          13
  CLUS_3                       108                           8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       34    143    114
  DEL PEAK  7(3P13) WILD-TYPE      5      8     30
D37V12, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        34                           5
  CLUS_2                       143                           8
  CLUS_3                       114                          30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  8(3P12.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       38     46     24     24
  DEL PEAK  8(3P12.3) WILD-TYPE      4      6      8      4
D38V1, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          38                             4
  CLUS_2                          46                             6
  CLUS_3                          24                             8
  CLUS_4                          24                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       42     50     40
  DEL PEAK  8(3P12.3) WILD-TYPE      5      6     11
D38V2, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          42                             5
  CLUS_2                          50                             6
  CLUS_3                          40                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      134    156    137
  DEL PEAK  8(3P12.3) WILD-TYPE     48     10     16
D38V3, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         134                            48
  CLUS_2                         156                            10
  CLUS_3                         137                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      114    115     83
  DEL PEAK  8(3P12.3) WILD-TYPE     38      7     10
D38V4, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         114                            38
  CLUS_2                         115                             7
  CLUS_3                          83                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       52     62     51
  DEL PEAK  8(3P12.3) WILD-TYPE      8     11     10
D38V5, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          52                             8
  CLUS_2                          62                            11
  CLUS_3                          51                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       46     27     49     43
  DEL PEAK  8(3P12.3) WILD-TYPE      8     14      3      4
D38V6, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          46                             8
  CLUS_2                          27                            14
  CLUS_3                          49                             3
  CLUS_4                          43                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       99    138    132     55
  DEL PEAK  8(3P12.3) WILD-TYPE     14     14     22     24
D38V7, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          99                            14
  CLUS_2                         138                            14
  CLUS_3                         132                            22
  CLUS_4                          55                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      152    171    101
  DEL PEAK  8(3P12.3) WILD-TYPE     26     18     30
D38V8, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         152                            26
  CLUS_2                         171                            18
  CLUS_3                         101                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P12.3) MUTATED      103    121     92     56     32
  DEL PEAK  8(3P12.3) WILD-TYPE     18     13     29      6      5
D38V9, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         103                            18
  CLUS_2                         121                            13
  CLUS_3                          92                            29
  CLUS_4                          56                             6
  CLUS_5                          32                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       79    103    180     42
  DEL PEAK  8(3P12.3) WILD-TYPE     10     15     19     27
D38V10, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          79                            10
  CLUS_2                         103                            15
  CLUS_3                         180                            19
  CLUS_4                          42                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       65    114    107
  DEL PEAK  8(3P12.3) WILD-TYPE     24     15      9
D38V11, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          65                            24
  CLUS_2                         114                            15
  CLUS_3                         107                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       34    140    112
  DEL PEAK  8(3P12.3) WILD-TYPE      5     11     32
D38V12, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          34                             5
  CLUS_2                         140                            11
  CLUS_3                         112                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  9(3P12.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P12.3) MUTATED       37     45     23     25
  DEL PEAK  9(3P12.3) WILD-TYPE      5      7      9      3
D39V1, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          37                             5
  CLUS_2                          45                             7
  CLUS_3                          23                             9
  CLUS_4                          25                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED       41     49     40
  DEL PEAK  9(3P12.3) WILD-TYPE      6      7     11
D39V2, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          41                             6
  CLUS_2                          49                             7
  CLUS_3                          40                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED      133    153    135
  DEL PEAK  9(3P12.3) WILD-TYPE     49     13     18
D39V3, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                         133                            49
  CLUS_2                         153                            13
  CLUS_3                         135                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED      113    114     81
  DEL PEAK  9(3P12.3) WILD-TYPE     39      8     12
D39V4, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                         113                            39
  CLUS_2                         114                             8
  CLUS_3                          81                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED       51     60     51
  DEL PEAK  9(3P12.3) WILD-TYPE      9     13     10
D39V5, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          51                             9
  CLUS_2                          60                            13
  CLUS_3                          51                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P12.3) MUTATED       45     27     48     42
  DEL PEAK  9(3P12.3) WILD-TYPE      9     14      4      5
D39V6, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          45                             9
  CLUS_2                          27                            14
  CLUS_3                          48                             4
  CLUS_4                          42                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P12.3) MUTATED       96    136    131     55
  DEL PEAK  9(3P12.3) WILD-TYPE     17     16     23     24
D39V7, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          96                            17
  CLUS_2                         136                            16
  CLUS_3                         131                            23
  CLUS_4                          55                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED      149    169    100
  DEL PEAK  9(3P12.3) WILD-TYPE     29     20     31
D39V8, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                         149                            29
  CLUS_2                         169                            20
  CLUS_3                         100                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3P12.3) MUTATED      102    118     90     56     32
  DEL PEAK  9(3P12.3) WILD-TYPE     19     16     31      6      5
D39V9, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                         102                            19
  CLUS_2                         118                            16
  CLUS_3                          90                            31
  CLUS_4                          56                             6
  CLUS_5                          32                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P12.3) MUTATED       79    101    176     42
  DEL PEAK  9(3P12.3) WILD-TYPE     10     17     23     27
D39V10, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          79                            10
  CLUS_2                         101                            17
  CLUS_3                         176                            23
  CLUS_4                          42                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED       65    113    105
  DEL PEAK  9(3P12.3) WILD-TYPE     24     16     11
D39V11, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          65                            24
  CLUS_2                         113                            16
  CLUS_3                         105                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P12.3) MUTATED       34    138    111
  DEL PEAK  9(3P12.3) WILD-TYPE      5     13     33
D39V12, multiclass
        clus
vv       DEL PEAK  9(3P12.3) MUTATED DEL PEAK  9(3P12.3) WILD-TYPE
  CLUS_1                          34                             5
  CLUS_2                         138                            13
  CLUS_3                         111                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 10(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q11.1) MUTATED        6      6      6      5
  DEL PEAK 10(3Q11.1) WILD-TYPE     36     46     26     23
D40V1, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           6                            46
  CLUS_3                           6                            26
  CLUS_4                           5                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED        7      7      9
  DEL PEAK 10(3Q11.1) WILD-TYPE     40     49     42
D40V2, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                           7                            40
  CLUS_2                           7                            49
  CLUS_3                           9                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED       30     31     18
  DEL PEAK 10(3Q11.1) WILD-TYPE    152    135    135
D40V3, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          30                           152
  CLUS_2                          31                           135
  CLUS_3                          18                           135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED       25     20     13
  DEL PEAK 10(3Q11.1) WILD-TYPE    127    102     80
D40V4, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          25                           127
  CLUS_2                          20                           102
  CLUS_3                          13                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED        9      8      7
  DEL PEAK 10(3Q11.1) WILD-TYPE     51     65     54
D40V5, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                           8                            65
  CLUS_3                           7                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q11.1) MUTATED        7      3      6      8
  DEL PEAK 10(3Q11.1) WILD-TYPE     47     38     46     39
D40V6, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                           7                            47
  CLUS_2                           3                            38
  CLUS_3                           6                            46
  CLUS_4                           8                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q11.1) MUTATED       20     26     23     10
  DEL PEAK 10(3Q11.1) WILD-TYPE     93    126    131     69
D40V7, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          20                            93
  CLUS_2                          26                           126
  CLUS_3                          23                           131
  CLUS_4                          10                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED       22     37     20
  DEL PEAK 10(3Q11.1) WILD-TYPE    156    152    111
D40V8, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          22                           156
  CLUS_2                          37                           152
  CLUS_3                          20                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3Q11.1) MUTATED       16     22     19     11      5
  DEL PEAK 10(3Q11.1) WILD-TYPE    105    112    102     51     32
D40V9, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          16                           105
  CLUS_2                          22                           112
  CLUS_3                          19                           102
  CLUS_4                          11                            51
  CLUS_5                           5                            32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q11.1) MUTATED       16     14     34      9
  DEL PEAK 10(3Q11.1) WILD-TYPE     73    104    165     60
D40V10, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          16                            73
  CLUS_2                          14                           104
  CLUS_3                          34                           165
  CLUS_4                           9                            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED       13     17     23
  DEL PEAK 10(3Q11.1) WILD-TYPE     76    112     93
D40V11, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                          13                            76
  CLUS_2                          17                           112
  CLUS_3                          23                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q11.1) MUTATED        5     27     21
  DEL PEAK 10(3Q11.1) WILD-TYPE     34    124    123
D40V12, multiclass
        clus
vv       DEL PEAK 10(3Q11.1) MUTATED DEL PEAK 10(3Q11.1) WILD-TYPE
  CLUS_1                           5                            34
  CLUS_2                          27                           124
  CLUS_3                          21                           123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 11(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       31     41     12     13
  DEL PEAK 11(4P15.2) WILD-TYPE     11     11     20     15
D41V1, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          41                            11
  CLUS_3                          12                            20
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       34     44     19
  DEL PEAK 11(4P15.2) WILD-TYPE     13     12     32
D41V2, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          34                            13
  CLUS_2                          44                            12
  CLUS_3                          19                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       88    136     93
  DEL PEAK 11(4P15.2) WILD-TYPE     94     30     60
D41V3, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          88                            94
  CLUS_2                         136                            30
  CLUS_3                          93                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       73     95     64
  DEL PEAK 11(4P15.2) WILD-TYPE     79     27     29
D41V4, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          73                            79
  CLUS_2                          95                            27
  CLUS_3                          64                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       43     50     40
  DEL PEAK 11(4P15.2) WILD-TYPE     17     23     21
D41V5, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          50                            23
  CLUS_3                          40                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       32     25     42     34
  DEL PEAK 11(4P15.2) WILD-TYPE     22     16     10     13
D41V6, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          32                            22
  CLUS_2                          25                            16
  CLUS_3                          42                            10
  CLUS_4                          34                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       74    116     83     43
  DEL PEAK 11(4P15.2) WILD-TYPE     39     36     71     36
D41V7, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          74                            39
  CLUS_2                         116                            36
  CLUS_3                          83                            71
  CLUS_4                          43                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED      106    147     63
  DEL PEAK 11(4P15.2) WILD-TYPE     72     42     68
D41V8, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                         106                            72
  CLUS_2                         147                            42
  CLUS_3                          63                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4P15.2) MUTATED       81    101     63     38     21
  DEL PEAK 11(4P15.2) WILD-TYPE     40     33     58     24     16
D41V9, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          81                            40
  CLUS_2                         101                            33
  CLUS_3                          63                            58
  CLUS_4                          38                            24
  CLUS_5                          21                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       59     81    130     34
  DEL PEAK 11(4P15.2) WILD-TYPE     30     37     69     35
D41V10, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          59                            30
  CLUS_2                          81                            37
  CLUS_3                         130                            69
  CLUS_4                          34                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       43     80     89
  DEL PEAK 11(4P15.2) WILD-TYPE     46     49     27
D41V11, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          43                            46
  CLUS_2                          80                            49
  CLUS_3                          89                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       19    116     77
  DEL PEAK 11(4P15.2) WILD-TYPE     20     35     67
D41V12, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                         116                            35
  CLUS_3                          77                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 12(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       29     38     11     16
  DEL PEAK 12(4Q22.1) WILD-TYPE     13     14     21     12
D42V1, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          38                            14
  CLUS_3                          11                            21
  CLUS_4                          16                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       31     41     22
  DEL PEAK 12(4Q22.1) WILD-TYPE     16     15     29
D42V2, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          31                            16
  CLUS_2                          41                            15
  CLUS_3                          22                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       82    123     80
  DEL PEAK 12(4Q22.1) WILD-TYPE    100     43     73
D42V3, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          82                           100
  CLUS_2                         123                            43
  CLUS_3                          80                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       68     82     52
  DEL PEAK 12(4Q22.1) WILD-TYPE     84     40     41
D42V4, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          68                            84
  CLUS_2                          82                            40
  CLUS_3                          52                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       42     38     37
  DEL PEAK 12(4Q22.1) WILD-TYPE     18     35     24
D42V5, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          38                            35
  CLUS_3                          37                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       37     23     29     28
  DEL PEAK 12(4Q22.1) WILD-TYPE     17     18     23     19
D42V6, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          23                            18
  CLUS_3                          29                            23
  CLUS_4                          28                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       61    107     82     33
  DEL PEAK 12(4Q22.1) WILD-TYPE     52     45     72     46
D42V7, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          61                            52
  CLUS_2                         107                            45
  CLUS_3                          82                            72
  CLUS_4                          33                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       97    122     64
  DEL PEAK 12(4Q22.1) WILD-TYPE     81     67     67
D42V8, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          97                            81
  CLUS_2                         122                            67
  CLUS_3                          64                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(4Q22.1) MUTATED       79     77     54     39     23
  DEL PEAK 12(4Q22.1) WILD-TYPE     42     57     67     23     14
D42V9, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          79                            42
  CLUS_2                          77                            57
  CLUS_3                          54                            67
  CLUS_4                          39                            23
  CLUS_5                          23                            14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       61     67    116     28
  DEL PEAK 12(4Q22.1) WILD-TYPE     28     51     83     41
D42V10, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          61                            28
  CLUS_2                          67                            51
  CLUS_3                         116                            83
  CLUS_4                          28                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       43     67     74
  DEL PEAK 12(4Q22.1) WILD-TYPE     46     62     42
D42V11, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          43                            46
  CLUS_2                          67                            62
  CLUS_3                          74                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       22     95     67
  DEL PEAK 12(4Q22.1) WILD-TYPE     17     56     77
D42V12, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          22                            17
  CLUS_2                          95                            56
  CLUS_3                          67                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 13(4Q32.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q32.3) MUTATED       29     42     14     20
  DEL PEAK 13(4Q32.3) WILD-TYPE     13     10     18      8
D43V1, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          42                            10
  CLUS_3                          14                            18
  CLUS_4                          20                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       32     45     28
  DEL PEAK 13(4Q32.3) WILD-TYPE     15     11     23
D43V2, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          32                            15
  CLUS_2                          45                            11
  CLUS_3                          28                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       95    141     93
  DEL PEAK 13(4Q32.3) WILD-TYPE     87     25     60
D43V3, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          95                            87
  CLUS_2                         141                            25
  CLUS_3                          93                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       80     94     65
  DEL PEAK 13(4Q32.3) WILD-TYPE     72     28     28
D43V4, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          80                            72
  CLUS_2                          94                            28
  CLUS_3                          65                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       45     41     37
  DEL PEAK 13(4Q32.3) WILD-TYPE     15     32     24
D43V5, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          41                            32
  CLUS_3                          37                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q32.3) MUTATED       37     24     33     29
  DEL PEAK 13(4Q32.3) WILD-TYPE     17     17     19     18
D43V6, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          24                            17
  CLUS_3                          33                            19
  CLUS_4                          29                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q32.3) MUTATED       72    122     94     39
  DEL PEAK 13(4Q32.3) WILD-TYPE     41     30     60     40
D43V7, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          72                            41
  CLUS_2                         122                            30
  CLUS_3                          94                            60
  CLUS_4                          39                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED      110    144     73
  DEL PEAK 13(4Q32.3) WILD-TYPE     68     45     58
D43V8, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                         110                            68
  CLUS_2                         144                            45
  CLUS_3                          73                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4Q32.3) MUTATED       85     95     60     46     28
  DEL PEAK 13(4Q32.3) WILD-TYPE     36     39     61     16      9
D43V9, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          85                            36
  CLUS_2                          95                            39
  CLUS_3                          60                            61
  CLUS_4                          46                            16
  CLUS_5                          28                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q32.3) MUTATED       66     75    140     33
  DEL PEAK 13(4Q32.3) WILD-TYPE     23     43     59     36
D43V10, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          66                            23
  CLUS_2                          75                            43
  CLUS_3                         140                            59
  CLUS_4                          33                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       48     82     88
  DEL PEAK 13(4Q32.3) WILD-TYPE     41     47     28
D43V11, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          48                            41
  CLUS_2                          82                            47
  CLUS_3                          88                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q32.3) MUTATED       27    120     71
  DEL PEAK 13(4Q32.3) WILD-TYPE     12     31     73
D43V12, multiclass
        clus
vv       DEL PEAK 13(4Q32.3) MUTATED DEL PEAK 13(4Q32.3) WILD-TYPE
  CLUS_1                          27                            12
  CLUS_2                         120                            31
  CLUS_3                          71                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 14(4Q35.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q35.2) MUTATED       30     40     16     21
  DEL PEAK 14(4Q35.2) WILD-TYPE     12     12     16      7
D44V1, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          30                            12
  CLUS_2                          40                            12
  CLUS_3                          16                            16
  CLUS_4                          21                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       33     43     31
  DEL PEAK 14(4Q35.2) WILD-TYPE     14     13     20
D44V2, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          43                            13
  CLUS_3                          31                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       98    140     93
  DEL PEAK 14(4Q35.2) WILD-TYPE     84     26     60
D44V3, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          98                            84
  CLUS_2                         140                            26
  CLUS_3                          93                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       79     96     64
  DEL PEAK 14(4Q35.2) WILD-TYPE     73     26     29
D44V4, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          79                            73
  CLUS_2                          96                            26
  CLUS_3                          64                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       43     44     38
  DEL PEAK 14(4Q35.2) WILD-TYPE     17     29     23
D44V5, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          44                            29
  CLUS_3                          38                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q35.2) MUTATED       36     24     34     31
  DEL PEAK 14(4Q35.2) WILD-TYPE     18     17     18     16
D44V6, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          24                            17
  CLUS_3                          34                            18
  CLUS_4                          31                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q35.2) MUTATED       70    122     98     39
  DEL PEAK 14(4Q35.2) WILD-TYPE     43     30     56     40
D44V7, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          70                            43
  CLUS_2                         122                            30
  CLUS_3                          98                            56
  CLUS_4                          39                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED      113    141     75
  DEL PEAK 14(4Q35.2) WILD-TYPE     65     48     56
D44V8, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                         113                            65
  CLUS_2                         141                            48
  CLUS_3                          75                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(4Q35.2) MUTATED       85     91     61     49     28
  DEL PEAK 14(4Q35.2) WILD-TYPE     36     43     60     13      9
D44V9, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          85                            36
  CLUS_2                          91                            43
  CLUS_3                          61                            60
  CLUS_4                          49                            13
  CLUS_5                          28                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q35.2) MUTATED       67     74    138     35
  DEL PEAK 14(4Q35.2) WILD-TYPE     22     44     61     34
D44V10, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          67                            22
  CLUS_2                          74                            44
  CLUS_3                         138                            61
  CLUS_4                          35                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       51     82     85
  DEL PEAK 14(4Q35.2) WILD-TYPE     38     47     31
D44V11, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          51                            38
  CLUS_2                          82                            47
  CLUS_3                          85                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q35.2) MUTATED       28    117     73
  DEL PEAK 14(4Q35.2) WILD-TYPE     11     34     71
D44V12, multiclass
        clus
vv       DEL PEAK 14(4Q35.2) MUTATED DEL PEAK 14(4Q35.2) WILD-TYPE
  CLUS_1                          28                            11
  CLUS_2                         117                            34
  CLUS_3                          73                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 15(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q12.1) MUTATED       31     42     21     21
  DEL PEAK 15(5Q12.1) WILD-TYPE     11     10     11      7
D45V1, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          42                            10
  CLUS_3                          21                            11
  CLUS_4                          21                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       33     45     37
  DEL PEAK 15(5Q12.1) WILD-TYPE     14     11     14
D45V2, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          45                            11
  CLUS_3                          37                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       99    136    134
  DEL PEAK 15(5Q12.1) WILD-TYPE     83     30     19
D45V3, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          99                            83
  CLUS_2                         136                            30
  CLUS_3                         134                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       91    100     77
  DEL PEAK 15(5Q12.1) WILD-TYPE     61     22     16
D45V4, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          91                            61
  CLUS_2                         100                            22
  CLUS_3                          77                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       44     53     46
  DEL PEAK 15(5Q12.1) WILD-TYPE     16     20     15
D45V5, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          53                            20
  CLUS_3                          46                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q12.1) MUTATED       36     30     39     38
  DEL PEAK 15(5Q12.1) WILD-TYPE     18     11     13      9
D45V6, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          30                            11
  CLUS_3                          39                            13
  CLUS_4                          38                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q12.1) MUTATED       78    126    114     48
  DEL PEAK 15(5Q12.1) WILD-TYPE     35     26     40     31
D45V7, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          78                            35
  CLUS_2                         126                            26
  CLUS_3                         114                            40
  CLUS_4                          48                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED      131    153     82
  DEL PEAK 15(5Q12.1) WILD-TYPE     47     36     49
D45V8, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                         131                            47
  CLUS_2                         153                            36
  CLUS_3                          82                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(5Q12.1) MUTATED       92     99     81     46     35
  DEL PEAK 15(5Q12.1) WILD-TYPE     29     35     40     16      2
D45V9, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          92                            29
  CLUS_2                          99                            35
  CLUS_3                          81                            40
  CLUS_4                          46                            16
  CLUS_5                          35                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q12.1) MUTATED       66     82    167     38
  DEL PEAK 15(5Q12.1) WILD-TYPE     23     36     32     31
D45V10, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          66                            23
  CLUS_2                          82                            36
  CLUS_3                         167                            32
  CLUS_4                          38                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       57    101     87
  DEL PEAK 15(5Q12.1) WILD-TYPE     32     28     29
D45V11, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          57                            32
  CLUS_2                         101                            28
  CLUS_3                          87                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q12.1) MUTATED       31    122     92
  DEL PEAK 15(5Q12.1) WILD-TYPE      8     29     52
D45V12, multiclass
        clus
vv       DEL PEAK 15(5Q12.1) MUTATED DEL PEAK 15(5Q12.1) WILD-TYPE
  CLUS_1                          31                             8
  CLUS_2                         122                            29
  CLUS_3                          92                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 16(5Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q31.1) MUTATED       34     43     20     20
  DEL PEAK 16(5Q31.1) WILD-TYPE      8      9     12      8
D46V1, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          34                             8
  CLUS_2                          43                             9
  CLUS_3                          20                            12
  CLUS_4                          20                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED       36     46     35
  DEL PEAK 16(5Q31.1) WILD-TYPE     11     10     16
D46V2, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          46                            10
  CLUS_3                          35                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED      110    138    138
  DEL PEAK 16(5Q31.1) WILD-TYPE     72     28     15
D46V3, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                         110                            72
  CLUS_2                         138                            28
  CLUS_3                         138                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED       98    102     84
  DEL PEAK 16(5Q31.1) WILD-TYPE     54     20      9
D46V4, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          98                            54
  CLUS_2                         102                            20
  CLUS_3                          84                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED       43     54     50
  DEL PEAK 16(5Q31.1) WILD-TYPE     17     19     11
D46V5, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          54                            19
  CLUS_3                          50                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q31.1) MUTATED       37     32     40     38
  DEL PEAK 16(5Q31.1) WILD-TYPE     17      9     12      9
D46V6, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          32                             9
  CLUS_3                          40                            12
  CLUS_4                          38                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q31.1) MUTATED       85    129    116     53
  DEL PEAK 16(5Q31.1) WILD-TYPE     28     23     38     26
D46V7, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          85                            28
  CLUS_2                         129                            23
  CLUS_3                         116                            38
  CLUS_4                          53                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED      137    157     89
  DEL PEAK 16(5Q31.1) WILD-TYPE     41     32     42
D46V8, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                         137                            41
  CLUS_2                         157                            32
  CLUS_3                          89                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(5Q31.1) MUTATED       93    108     85     46     36
  DEL PEAK 16(5Q31.1) WILD-TYPE     28     26     36     16      1
D46V9, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          93                            28
  CLUS_2                         108                            26
  CLUS_3                          85                            36
  CLUS_4                          46                            16
  CLUS_5                          36                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q31.1) MUTATED       69     90    171     38
  DEL PEAK 16(5Q31.1) WILD-TYPE     20     28     28     31
D46V10, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          69                            20
  CLUS_2                          90                            28
  CLUS_3                         171                            28
  CLUS_4                          38                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED       61    105     92
  DEL PEAK 16(5Q31.1) WILD-TYPE     28     24     24
D46V11, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          61                            28
  CLUS_2                         105                            24
  CLUS_3                          92                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q31.1) MUTATED       33    128     97
  DEL PEAK 16(5Q31.1) WILD-TYPE      6     23     47
D46V12, multiclass
        clus
vv       DEL PEAK 16(5Q31.1) MUTATED DEL PEAK 16(5Q31.1) WILD-TYPE
  CLUS_1                          33                             6
  CLUS_2                         128                            23
  CLUS_3                          97                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 17(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED        9     17      6      6
  DEL PEAK 17(6P25.3) WILD-TYPE     33     35     26     22
D47V1, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                           9                            33
  CLUS_2                          17                            35
  CLUS_3                           6                            26
  CLUS_4                           6                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       10     18     10
  DEL PEAK 17(6P25.3) WILD-TYPE     37     38     41
D47V2, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          10                            37
  CLUS_2                          18                            38
  CLUS_3                          10                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       42     63     29
  DEL PEAK 17(6P25.3) WILD-TYPE    140    103    124
D47V3, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          42                           140
  CLUS_2                          63                           103
  CLUS_3                          29                           124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       29     55     20
  DEL PEAK 17(6P25.3) WILD-TYPE    123     67     73
D47V4, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          29                           123
  CLUS_2                          55                            67
  CLUS_3                          20                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       14     24     12
  DEL PEAK 17(6P25.3) WILD-TYPE     46     49     49
D47V5, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          24                            49
  CLUS_3                          12                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED       14     14     18      4
  DEL PEAK 17(6P25.3) WILD-TYPE     40     27     34     43
D47V6, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          14                            40
  CLUS_2                          14                            27
  CLUS_3                          18                            34
  CLUS_4                           4                            43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED       30     63     23     17
  DEL PEAK 17(6P25.3) WILD-TYPE     83     89    131     62
D47V7, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          30                            83
  CLUS_2                          63                            89
  CLUS_3                          23                           131
  CLUS_4                          17                            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       37     78     18
  DEL PEAK 17(6P25.3) WILD-TYPE    141    111    113
D47V8, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          37                           141
  CLUS_2                          78                           111
  CLUS_3                          18                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(6P25.3) MUTATED       29     42     31     21      5
  DEL PEAK 17(6P25.3) WILD-TYPE     92     92     90     41     32
D47V9, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          29                            92
  CLUS_2                          42                            92
  CLUS_3                          31                            90
  CLUS_4                          21                            41
  CLUS_5                           5                            32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED       39     32     45     12
  DEL PEAK 17(6P25.3) WILD-TYPE     50     86    154     57
D47V10, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          39                            50
  CLUS_2                          32                            86
  CLUS_3                          45                           154
  CLUS_4                          12                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       17     36     37
  DEL PEAK 17(6P25.3) WILD-TYPE     72     93     79
D47V11, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          17                            72
  CLUS_2                          36                            93
  CLUS_3                          37                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED        8     48     34
  DEL PEAK 17(6P25.3) WILD-TYPE     31    103    110
D47V12, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                           8                            31
  CLUS_2                          48                           103
  CLUS_3                          34                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 18(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q22.31) MUTATED        8     20      4      6
  DEL PEAK 18(6Q22.31) WILD-TYPE     34     32     28     22
D48V1, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           20                             32
  CLUS_3                            4                             28
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       10     22      6
  DEL PEAK 18(6Q22.31) WILD-TYPE     37     34     45
D48V2, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           22                             34
  CLUS_3                            6                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       32     59     31
  DEL PEAK 18(6Q22.31) WILD-TYPE    150    107    122
D48V3, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           32                            150
  CLUS_2                           59                            107
  CLUS_3                           31                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       29     46     17
  DEL PEAK 18(6Q22.31) WILD-TYPE    123     76     76
D48V4, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           29                            123
  CLUS_2                           46                             76
  CLUS_3                           17                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       17     20     12
  DEL PEAK 18(6Q22.31) WILD-TYPE     43     53     49
D48V5, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           20                             53
  CLUS_3                           12                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q22.31) MUTATED       15     11     15      8
  DEL PEAK 18(6Q22.31) WILD-TYPE     39     30     37     39
D48V6, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           15                             39
  CLUS_2                           11                             30
  CLUS_3                           15                             37
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q22.31) MUTATED       20     55     29     17
  DEL PEAK 18(6Q22.31) WILD-TYPE     93     97    125     62
D48V7, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           20                             93
  CLUS_2                           55                             97
  CLUS_3                           29                            125
  CLUS_4                           17                             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       38     59     24
  DEL PEAK 18(6Q22.31) WILD-TYPE    140    130    107
D48V8, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           38                            140
  CLUS_2                           59                            130
  CLUS_3                           24                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(6Q22.31) MUTATED       34     38     22     14      7
  DEL PEAK 18(6Q22.31) WILD-TYPE     87     96     99     48     30
D48V9, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           34                             87
  CLUS_2                           38                             96
  CLUS_3                           22                             99
  CLUS_4                           14                             48
  CLUS_5                            7                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q22.31) MUTATED       28     30     40     17
  DEL PEAK 18(6Q22.31) WILD-TYPE     61     88    159     52
D48V10, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           28                             61
  CLUS_2                           30                             88
  CLUS_3                           40                            159
  CLUS_4                           17                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED       15     33     31
  DEL PEAK 18(6Q22.31) WILD-TYPE     74     96     85
D48V11, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                           15                             74
  CLUS_2                           33                             96
  CLUS_3                           31                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q22.31) MUTATED        7     41     31
  DEL PEAK 18(6Q22.31) WILD-TYPE     32    110    113
D48V12, multiclass
        clus
vv       DEL PEAK 18(6Q22.31) MUTATED DEL PEAK 18(6Q22.31) WILD-TYPE
  CLUS_1                            7                             32
  CLUS_2                           41                            110
  CLUS_3                           31                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 19(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED        8     21      5      6
  DEL PEAK 19(6Q26) WILD-TYPE     34     31     27     22
D49V1, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         8                          34
  CLUS_2                        21                          31
  CLUS_3                         5                          27
  CLUS_4                         6                          22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       10     23      7
  DEL PEAK 19(6Q26) WILD-TYPE     37     33     44
D49V2, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        10                          37
  CLUS_2                        23                          33
  CLUS_3                         7                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       35     64     35
  DEL PEAK 19(6Q26) WILD-TYPE    147    102    118
D49V3, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        35                         147
  CLUS_2                        64                         102
  CLUS_3                        35                         118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       29     52     21
  DEL PEAK 19(6Q26) WILD-TYPE    123     70     72
D49V4, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        29                         123
  CLUS_2                        52                          70
  CLUS_3                        21                          72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       19     21     17
  DEL PEAK 19(6Q26) WILD-TYPE     41     52     44
D49V5, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        19                          41
  CLUS_2                        21                          52
  CLUS_3                        17                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED       15     14     17     11
  DEL PEAK 19(6Q26) WILD-TYPE     39     27     35     36
D49V6, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        15                          39
  CLUS_2                        14                          27
  CLUS_3                        17                          35
  CLUS_4                        11                          36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED       23     60     34     16
  DEL PEAK 19(6Q26) WILD-TYPE     90     92    120     63
D49V7, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        23                          90
  CLUS_2                        60                          92
  CLUS_3                        34                         120
  CLUS_4                        16                          63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       38     66     29
  DEL PEAK 19(6Q26) WILD-TYPE    140    123    102
D49V8, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        38                         140
  CLUS_2                        66                         123
  CLUS_3                        29                         102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(6Q26) MUTATED       38     41     20     21      7
  DEL PEAK 19(6Q26) WILD-TYPE     83     93    101     41     30
D49V9, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        38                          83
  CLUS_2                        41                          93
  CLUS_3                        20                         101
  CLUS_4                        21                          41
  CLUS_5                         7                          30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED       33     31     44     19
  DEL PEAK 19(6Q26) WILD-TYPE     56     87    155     50
D49V10, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        33                          56
  CLUS_2                        31                          87
  CLUS_3                        44                         155
  CLUS_4                        19                          50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       15     35     38
  DEL PEAK 19(6Q26) WILD-TYPE     74     94     78
D49V11, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        15                          74
  CLUS_2                        35                          94
  CLUS_3                        38                          78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       10     48     30
  DEL PEAK 19(6Q26) WILD-TYPE     29    103    114
D49V12, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        10                          29
  CLUS_2                        48                         103
  CLUS_3                        30                         114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 20(7Q11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q11.22) MUTATED        4      3      2      3
  DEL PEAK 20(7Q11.22) WILD-TYPE     38     49     30     25
D50V1, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            4                             38
  CLUS_2                            3                             49
  CLUS_3                            2                             30
  CLUS_4                            3                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED        4      3      5
  DEL PEAK 20(7Q11.22) WILD-TYPE     43     53     46
D50V2, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            4                             43
  CLUS_2                            3                             53
  CLUS_3                            5                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED       13      9     26
  DEL PEAK 20(7Q11.22) WILD-TYPE    169    157    127
D50V3, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                           13                            169
  CLUS_2                            9                            157
  CLUS_3                           26                            127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED       18      9      9
  DEL PEAK 20(7Q11.22) WILD-TYPE    134    113     84
D50V4, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                           18                            134
  CLUS_2                            9                            113
  CLUS_3                            9                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED        8      8      6
  DEL PEAK 20(7Q11.22) WILD-TYPE     52     65     55
D50V5, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            8                             52
  CLUS_2                            8                             65
  CLUS_3                            6                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q11.22) MUTATED       10      3      5      4
  DEL PEAK 20(7Q11.22) WILD-TYPE     44     38     47     43
D50V6, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                           10                             44
  CLUS_2                            3                             38
  CLUS_3                            5                             47
  CLUS_4                            4                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q11.22) MUTATED        7      8     27      6
  DEL PEAK 20(7Q11.22) WILD-TYPE    106    144    127     73
D50V7, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            7                            106
  CLUS_2                            8                            144
  CLUS_3                           27                            127
  CLUS_4                            6                             73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED       12     12     24
  DEL PEAK 20(7Q11.22) WILD-TYPE    166    177    107
D50V8, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                           12                            166
  CLUS_2                           12                            177
  CLUS_3                           24                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(7Q11.22) MUTATED       10     11     12      6      6
  DEL PEAK 20(7Q11.22) WILD-TYPE    111    123    109     56     31
D50V9, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                           10                            111
  CLUS_2                           11                            123
  CLUS_3                           12                            109
  CLUS_4                            6                             56
  CLUS_5                            6                             31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q11.22) MUTATED        6     11     24      4
  DEL PEAK 20(7Q11.22) WILD-TYPE     83    107    175     65
D50V10, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            6                             83
  CLUS_2                           11                            107
  CLUS_3                           24                            175
  CLUS_4                            4                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED        9     16     10
  DEL PEAK 20(7Q11.22) WILD-TYPE     80    113    106
D50V11, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            9                             80
  CLUS_2                           16                            113
  CLUS_3                           10                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q11.22) MUTATED        3     16     16
  DEL PEAK 20(7Q11.22) WILD-TYPE     36    135    128
D50V12, multiclass
        clus
vv       DEL PEAK 20(7Q11.22) MUTATED DEL PEAK 20(7Q11.22) WILD-TYPE
  CLUS_1                            3                             36
  CLUS_2                           16                            135
  CLUS_3                           16                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 21(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.3) MUTATED       12      6      8      5
  DEL PEAK 21(7Q36.3) WILD-TYPE     30     46     24     23
D51V1, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                           6                            46
  CLUS_3                           8                            24
  CLUS_4                           5                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       14      6     11
  DEL PEAK 21(7Q36.3) WILD-TYPE     33     50     40
D51V2, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                           6                            50
  CLUS_3                          11                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       39     22     43
  DEL PEAK 21(7Q36.3) WILD-TYPE    143    144    110
D51V3, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          39                           143
  CLUS_2                          22                           144
  CLUS_3                          43                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       36     20     22
  DEL PEAK 21(7Q36.3) WILD-TYPE    116    102     71
D51V4, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          36                           116
  CLUS_2                          20                           102
  CLUS_3                          22                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       13     15     12
  DEL PEAK 21(7Q36.3) WILD-TYPE     47     58     49
D51V5, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          15                            58
  CLUS_3                          12                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.3) MUTATED       17      5     11      7
  DEL PEAK 21(7Q36.3) WILD-TYPE     37     36     41     40
D51V6, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          17                            37
  CLUS_2                           5                            36
  CLUS_3                          11                            41
  CLUS_4                           7                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.3) MUTATED       28     18     47     11
  DEL PEAK 21(7Q36.3) WILD-TYPE     85    134    107     68
D51V7, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          28                            85
  CLUS_2                          18                           134
  CLUS_3                          47                           107
  CLUS_4                          11                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       44     24     36
  DEL PEAK 21(7Q36.3) WILD-TYPE    134    165     95
D51V8, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          44                           134
  CLUS_2                          24                           165
  CLUS_3                          36                            95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(7Q36.3) MUTATED       28     26     24      8     11
  DEL PEAK 21(7Q36.3) WILD-TYPE     93    108     97     54     26
D51V9, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          28                            93
  CLUS_2                          26                           108
  CLUS_3                          24                            97
  CLUS_4                           8                            54
  CLUS_5                          11                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.3) MUTATED       14     29     49      5
  DEL PEAK 21(7Q36.3) WILD-TYPE     75     89    150     64
D51V10, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          14                            75
  CLUS_2                          29                            89
  CLUS_3                          49                           150
  CLUS_4                           5                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       21     25     24
  DEL PEAK 21(7Q36.3) WILD-TYPE     68    104     92
D51V11, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          21                            68
  CLUS_2                          25                           104
  CLUS_3                          24                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.3) MUTATED       14     31     25
  DEL PEAK 21(7Q36.3) WILD-TYPE     25    120    119
D51V12, multiclass
        clus
vv       DEL PEAK 21(7Q36.3) MUTATED DEL PEAK 21(7Q36.3) WILD-TYPE
  CLUS_1                          14                            25
  CLUS_2                          31                           120
  CLUS_3                          25                           119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 22(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED       28     39     22     17
  DEL PEAK 22(8P23.2) WILD-TYPE     14     13     10     11
D52V1, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          39                            13
  CLUS_3                          22                            10
  CLUS_4                          17                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       30     40     36
  DEL PEAK 22(8P23.2) WILD-TYPE     17     16     15
D52V2, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          40                            16
  CLUS_3                          36                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED      101    120    120
  DEL PEAK 22(8P23.2) WILD-TYPE     81     46     33
D52V3, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                         101                            81
  CLUS_2                         120                            46
  CLUS_3                         120                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       90     91     67
  DEL PEAK 22(8P23.2) WILD-TYPE     62     31     26
D52V4, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          90                            62
  CLUS_2                          91                            31
  CLUS_3                          67                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       45     54     38
  DEL PEAK 22(8P23.2) WILD-TYPE     15     19     23
D52V5, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          54                            19
  CLUS_3                          38                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED       37     25     40     35
  DEL PEAK 22(8P23.2) WILD-TYPE     17     16     12     12
D52V6, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          25                            16
  CLUS_3                          40                            12
  CLUS_4                          35                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED       74    114    102     48
  DEL PEAK 22(8P23.2) WILD-TYPE     39     38     52     31
D52V7, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          74                            39
  CLUS_2                         114                            38
  CLUS_3                         102                            52
  CLUS_4                          48                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED      111    138     89
  DEL PEAK 22(8P23.2) WILD-TYPE     67     51     42
D52V8, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                         111                            67
  CLUS_2                         138                            51
  CLUS_3                          89                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(8P23.2) MUTATED       83     97     74     42     28
  DEL PEAK 22(8P23.2) WILD-TYPE     38     37     47     20      9
D52V9, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          83                            38
  CLUS_2                          97                            37
  CLUS_3                          74                            47
  CLUS_4                          42                            20
  CLUS_5                          28                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED       65     79    142     38
  DEL PEAK 22(8P23.2) WILD-TYPE     24     39     57     31
D52V10, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          65                            24
  CLUS_2                          79                            39
  CLUS_3                         142                            57
  CLUS_4                          38                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       56     85     83
  DEL PEAK 22(8P23.2) WILD-TYPE     33     44     33
D52V11, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          56                            33
  CLUS_2                          85                            44
  CLUS_3                          83                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       30    108     86
  DEL PEAK 22(8P23.2) WILD-TYPE      9     43     58
D52V12, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          30                             9
  CLUS_2                         108                            43
  CLUS_3                          86                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 23(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P23) MUTATED       36     30     19     16
  DEL PEAK 23(9P23) WILD-TYPE      6     22     13     12
D53V1, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        36                           6
  CLUS_2                        30                          22
  CLUS_3                        19                          13
  CLUS_4                        16                          12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED       40     30     31
  DEL PEAK 23(9P23) WILD-TYPE      7     26     20
D53V2, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        40                           7
  CLUS_2                        30                          26
  CLUS_3                        31                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED      102    101    129
  DEL PEAK 23(9P23) WILD-TYPE     80     65     24
D53V3, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                       102                          80
  CLUS_2                       101                          65
  CLUS_3                       129                          24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED       94     78     72
  DEL PEAK 23(9P23) WILD-TYPE     58     44     21
D53V4, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        94                          58
  CLUS_2                        78                          44
  CLUS_3                        72                          21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED       33     48     43
  DEL PEAK 23(9P23) WILD-TYPE     27     25     18
D53V5, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        33                          27
  CLUS_2                        48                          25
  CLUS_3                        43                          18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P23) MUTATED       28     27     35     34
  DEL PEAK 23(9P23) WILD-TYPE     26     14     17     13
D53V6, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        28                          26
  CLUS_2                        27                          14
  CLUS_3                        35                          17
  CLUS_4                        34                          13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P23) MUTATED       89     87    110     43
  DEL PEAK 23(9P23) WILD-TYPE     24     65     44     36
D53V7, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        89                          24
  CLUS_2                        87                          65
  CLUS_3                       110                          44
  CLUS_4                        43                          36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED      136    112     81
  DEL PEAK 23(9P23) WILD-TYPE     42     77     50
D53V8, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                       136                          42
  CLUS_2                       112                          77
  CLUS_3                        81                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(9P23) MUTATED       78     97     74     36     32
  DEL PEAK 23(9P23) WILD-TYPE     43     37     47     26      5
D53V9, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        78                          43
  CLUS_2                        97                          37
  CLUS_3                        74                          47
  CLUS_4                        36                          26
  CLUS_5                        32                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P23) MUTATED       50     81    151     35
  DEL PEAK 23(9P23) WILD-TYPE     39     37     48     34
D53V10, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        50                          39
  CLUS_2                        81                          37
  CLUS_3                       151                          48
  CLUS_4                        35                          34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED       57     90     76
  DEL PEAK 23(9P23) WILD-TYPE     32     39     40
D53V11, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        57                          32
  CLUS_2                        90                          39
  CLUS_3                        76                          40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P23) MUTATED       31    102     90
  DEL PEAK 23(9P23) WILD-TYPE      8     49     54
D53V12, multiclass
        clus
vv       DEL PEAK 23(9P23) MUTATED DEL PEAK 23(9P23) WILD-TYPE
  CLUS_1                        31                           8
  CLUS_2                       102                          49
  CLUS_3                        90                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 24(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P21.3) MUTATED       36     40     23     18
  DEL PEAK 24(9P21.3) WILD-TYPE      6     12      9     10
D54V1, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          36                             6
  CLUS_2                          40                            12
  CLUS_3                          23                             9
  CLUS_4                          18                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED       39     43     35
  DEL PEAK 24(9P21.3) WILD-TYPE      8     13     16
D54V2, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          39                             8
  CLUS_2                          43                            13
  CLUS_3                          35                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED      121    130    137
  DEL PEAK 24(9P21.3) WILD-TYPE     61     36     16
D54V3, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                         121                            61
  CLUS_2                         130                            36
  CLUS_3                         137                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED      114     95     78
  DEL PEAK 24(9P21.3) WILD-TYPE     38     27     15
D54V4, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                         114                            38
  CLUS_2                          95                            27
  CLUS_3                          78                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED       46     54     48
  DEL PEAK 24(9P21.3) WILD-TYPE     14     19     13
D54V5, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          54                            19
  CLUS_3                          48                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P21.3) MUTATED       39     30     40     39
  DEL PEAK 24(9P21.3) WILD-TYPE     15     11     12      8
D54V6, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          39                            15
  CLUS_2                          30                            11
  CLUS_3                          40                            12
  CLUS_4                          39                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P21.3) MUTATED      100    112    122     51
  DEL PEAK 24(9P21.3) WILD-TYPE     13     40     32     28
D54V7, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                         100                            13
  CLUS_2                         112                            40
  CLUS_3                         122                            32
  CLUS_4                          51                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED      150    141     94
  DEL PEAK 24(9P21.3) WILD-TYPE     28     48     37
D54V8, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                         150                            28
  CLUS_2                         141                            48
  CLUS_3                          94                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(9P21.3) MUTATED       92    106     95     46     33
  DEL PEAK 24(9P21.3) WILD-TYPE     29     28     26     16      4
D54V9, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          92                            29
  CLUS_2                         106                            28
  CLUS_3                          95                            26
  CLUS_4                          46                            16
  CLUS_5                          33                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P21.3) MUTATED       68     95    165     44
  DEL PEAK 24(9P21.3) WILD-TYPE     21     23     34     25
D54V10, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          68                            21
  CLUS_2                          95                            23
  CLUS_3                         165                            34
  CLUS_4                          44                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED       71    105     86
  DEL PEAK 24(9P21.3) WILD-TYPE     18     24     30
D54V11, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          71                            18
  CLUS_2                         105                            24
  CLUS_3                          86                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P21.3) MUTATED       36    121    105
  DEL PEAK 24(9P21.3) WILD-TYPE      3     30     39
D54V12, multiclass
        clus
vv       DEL PEAK 24(9P21.3) MUTATED DEL PEAK 24(9P21.3) WILD-TYPE
  CLUS_1                          36                             3
  CLUS_2                         121                            30
  CLUS_3                         105                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 25(9P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.1) MUTATED       32     31     20     14
  DEL PEAK 25(9P21.1) WILD-TYPE     10     21     12     14
D55V1, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          32                            10
  CLUS_2                          31                            21
  CLUS_3                          20                            12
  CLUS_4                          14                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED       34     33     30
  DEL PEAK 25(9P21.1) WILD-TYPE     13     23     21
D55V2, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          34                            13
  CLUS_2                          33                            23
  CLUS_3                          30                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED      106     97    123
  DEL PEAK 25(9P21.1) WILD-TYPE     76     69     30
D55V3, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                         106                            76
  CLUS_2                          97                            69
  CLUS_3                         123                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED       98     75     69
  DEL PEAK 25(9P21.1) WILD-TYPE     54     47     24
D55V4, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          98                            54
  CLUS_2                          75                            47
  CLUS_3                          69                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED       37     49     37
  DEL PEAK 25(9P21.1) WILD-TYPE     23     24     24
D55V5, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          37                            23
  CLUS_2                          49                            24
  CLUS_3                          37                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.1) MUTATED       31     27     36     29
  DEL PEAK 25(9P21.1) WILD-TYPE     23     14     16     18
D55V6, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          31                            23
  CLUS_2                          27                            14
  CLUS_3                          36                            16
  CLUS_4                          29                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.1) MUTATED       88     85    107     43
  DEL PEAK 25(9P21.1) WILD-TYPE     25     67     47     36
D55V7, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          88                            25
  CLUS_2                          85                            67
  CLUS_3                         107                            47
  CLUS_4                          43                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED      135    106     82
  DEL PEAK 25(9P21.1) WILD-TYPE     43     83     49
D55V8, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                         135                            43
  CLUS_2                         106                            83
  CLUS_3                          82                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(9P21.1) MUTATED       77     89     82     35     28
  DEL PEAK 25(9P21.1) WILD-TYPE     44     45     39     27      9
D55V9, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          77                            44
  CLUS_2                          89                            45
  CLUS_3                          82                            39
  CLUS_4                          35                            27
  CLUS_5                          28                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.1) MUTATED       51     84    140     36
  DEL PEAK 25(9P21.1) WILD-TYPE     38     34     59     33
D55V10, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          51                            38
  CLUS_2                          84                            34
  CLUS_3                         140                            59
  CLUS_4                          36                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED       59     93     70
  DEL PEAK 25(9P21.1) WILD-TYPE     30     36     46
D55V11, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          59                            30
  CLUS_2                          93                            36
  CLUS_3                          70                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.1) MUTATED       30     98     94
  DEL PEAK 25(9P21.1) WILD-TYPE      9     53     50
D55V12, multiclass
        clus
vv       DEL PEAK 25(9P21.1) MUTATED DEL PEAK 25(9P21.1) WILD-TYPE
  CLUS_1                          30                             9
  CLUS_2                          98                            53
  CLUS_3                          94                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 26(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       28     13     19     15
  DEL PEAK 26(9Q21.11) WILD-TYPE     14     39     13     13
D56V1, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           13                             39
  CLUS_3                           19                             13
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       31     14     30
  DEL PEAK 26(9Q21.11) WILD-TYPE     16     42     21
D56V2, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           31                             16
  CLUS_2                           14                             42
  CLUS_3                           30                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       88     53    110
  DEL PEAK 26(9Q21.11) WILD-TYPE     94    113     43
D56V3, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           88                             94
  CLUS_2                           53                            113
  CLUS_3                          110                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       89     33     62
  DEL PEAK 26(9Q21.11) WILD-TYPE     63     89     31
D56V4, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           89                             63
  CLUS_2                           33                             89
  CLUS_3                           62                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       29     38     26
  DEL PEAK 26(9Q21.11) WILD-TYPE     31     35     35
D56V5, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           38                             35
  CLUS_3                           26                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       22     18     32     21
  DEL PEAK 26(9Q21.11) WILD-TYPE     32     23     20     26
D56V6, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           18                             23
  CLUS_3                           32                             20
  CLUS_4                           21                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       73     36    100     40
  DEL PEAK 26(9Q21.11) WILD-TYPE     40    116     54     39
D56V7, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           73                             40
  CLUS_2                           36                            116
  CLUS_3                          100                             54
  CLUS_4                           40                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED      125     46     78
  DEL PEAK 26(9Q21.11) WILD-TYPE     53    143     53
D56V8, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                          125                             53
  CLUS_2                           46                            143
  CLUS_3                           78                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(9Q21.11) MUTATED       58     62     71     17     29
  DEL PEAK 26(9Q21.11) WILD-TYPE     63     72     50     45      8
D56V9, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           58                             63
  CLUS_2                           62                             72
  CLUS_3                           71                             50
  CLUS_4                           17                             45
  CLUS_5                           29                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       23     54    129     31
  DEL PEAK 26(9Q21.11) WILD-TYPE     66     64     70     38
D56V10, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                           54                             64
  CLUS_3                          129                             70
  CLUS_4                           31                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       53     70     50
  DEL PEAK 26(9Q21.11) WILD-TYPE     36     59     66
D56V11, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           53                             36
  CLUS_2                           70                             59
  CLUS_3                           50                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       29     72     72
  DEL PEAK 26(9Q21.11) WILD-TYPE     10     79     72
D56V12, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           29                             10
  CLUS_2                           72                             79
  CLUS_3                           72                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 27(10P15.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.2) MUTATED       15     27     11     14
  DEL PEAK 27(10P15.2) WILD-TYPE     27     25     21     14
D57V1, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           27                             25
  CLUS_3                           11                             21
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       18     28     21
  DEL PEAK 27(10P15.2) WILD-TYPE     29     28     30
D57V2, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           28                             28
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       58     94     67
  DEL PEAK 27(10P15.2) WILD-TYPE    124     72     86
D57V3, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           58                            124
  CLUS_2                           94                             72
  CLUS_3                           67                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       47     88     29
  DEL PEAK 27(10P15.2) WILD-TYPE    105     34     64
D57V4, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           47                            105
  CLUS_2                           88                             34
  CLUS_3                           29                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       25     26     32
  DEL PEAK 27(10P15.2) WILD-TYPE     35     47     29
D57V5, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           26                             47
  CLUS_3                           32                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.2) MUTATED       21     16     19     27
  DEL PEAK 27(10P15.2) WILD-TYPE     33     25     33     20
D57V6, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           21                             33
  CLUS_2                           16                             25
  CLUS_3                           19                             33
  CLUS_4                           27                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.2) MUTATED       39     94     60     25
  DEL PEAK 27(10P15.2) WILD-TYPE     74     58     94     54
D57V7, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           39                             74
  CLUS_2                           94                             58
  CLUS_3                           60                             94
  CLUS_4                           25                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       66    106     46
  DEL PEAK 27(10P15.2) WILD-TYPE    112     83     85
D57V8, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           66                            112
  CLUS_2                          106                             83
  CLUS_3                           46                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10P15.2) MUTATED       53     64     35     40     20
  DEL PEAK 27(10P15.2) WILD-TYPE     68     70     86     22     17
D57V9, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           53                             68
  CLUS_2                           64                             70
  CLUS_3                           35                             86
  CLUS_4                           40                             22
  CLUS_5                           20                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.2) MUTATED       63     42     91     16
  DEL PEAK 27(10P15.2) WILD-TYPE     26     76    108     53
D57V10, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           63                             26
  CLUS_2                           42                             76
  CLUS_3                           91                            108
  CLUS_4                           16                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       30     54     61
  DEL PEAK 27(10P15.2) WILD-TYPE     59     75     55
D57V11, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           30                             59
  CLUS_2                           54                             75
  CLUS_3                           61                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.2) MUTATED       19     77     49
  DEL PEAK 27(10P15.2) WILD-TYPE     20     74     95
D57V12, multiclass
        clus
vv       DEL PEAK 27(10P15.2) MUTATED DEL PEAK 27(10P15.2) WILD-TYPE
  CLUS_1                           19                             20
  CLUS_2                           77                             74
  CLUS_3                           49                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 28(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10Q23.31) MUTATED       17     38     13     13
  DEL PEAK 28(10Q23.31) WILD-TYPE     25     14     19     15
D58V1, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            17                              25
  CLUS_2                            38                              14
  CLUS_3                            13                              19
  CLUS_4                            13                              15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       17     40     24
  DEL PEAK 28(10Q23.31) WILD-TYPE     30     16     27
D58V2, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            17                              30
  CLUS_2                            40                              16
  CLUS_3                            24                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       74    119     75
  DEL PEAK 28(10Q23.31) WILD-TYPE    108     47     78
D58V3, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            74                             108
  CLUS_2                           119                              47
  CLUS_3                            75                              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       57     92     49
  DEL PEAK 28(10Q23.31) WILD-TYPE     95     30     44
D58V4, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            57                              95
  CLUS_2                            92                              30
  CLUS_3                            49                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       32     31     36
  DEL PEAK 28(10Q23.31) WILD-TYPE     28     42     25
D58V5, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            32                              28
  CLUS_2                            31                              42
  CLUS_3                            36                              25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10Q23.31) MUTATED       25     20     24     30
  DEL PEAK 28(10Q23.31) WILD-TYPE     29     21     28     17
D58V6, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            25                              29
  CLUS_2                            20                              21
  CLUS_3                            24                              28
  CLUS_4                            30                              17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10Q23.31) MUTATED       49    114     69     35
  DEL PEAK 28(10Q23.31) WILD-TYPE     64     38     85     44
D58V7, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            49                              64
  CLUS_2                           114                              38
  CLUS_3                            69                              85
  CLUS_4                            35                              44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       78    135     54
  DEL PEAK 28(10Q23.31) WILD-TYPE    100     54     77
D58V8, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            78                             100
  CLUS_2                           135                              54
  CLUS_3                            54                              77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(10Q23.31) MUTATED       60     83     49     42     20
  DEL PEAK 28(10Q23.31) WILD-TYPE     61     51     72     20     17
D58V9, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            60                              61
  CLUS_2                            83                              51
  CLUS_3                            49                              72
  CLUS_4                            42                              20
  CLUS_5                            20                              17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10Q23.31) MUTATED       64     51    112     27
  DEL PEAK 28(10Q23.31) WILD-TYPE     25     67     87     42
D58V10, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            64                              25
  CLUS_2                            51                              67
  CLUS_3                           112                              87
  CLUS_4                            27                              42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       38     69     72
  DEL PEAK 28(10Q23.31) WILD-TYPE     51     60     44
D58V11, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            38                              51
  CLUS_2                            69                              60
  CLUS_3                            72                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10Q23.31) MUTATED       20     99     60
  DEL PEAK 28(10Q23.31) WILD-TYPE     19     52     84
D58V12, multiclass
        clus
vv       DEL PEAK 28(10Q23.31) MUTATED DEL PEAK 28(10Q23.31) WILD-TYPE
  CLUS_1                            20                              19
  CLUS_2                            99                              52
  CLUS_3                            60                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 29(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11P15.5) MUTATED       30     21      9     18
  DEL PEAK 29(11P15.5) WILD-TYPE     12     31     23     10
D59V1, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           21                             31
  CLUS_3                            9                             23
  CLUS_4                           18                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       32     22     24
  DEL PEAK 29(11P15.5) WILD-TYPE     15     34     27
D59V2, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           22                             34
  CLUS_3                           24                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       63     80    102
  DEL PEAK 29(11P15.5) WILD-TYPE    119     86     51
D59V3, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           63                            119
  CLUS_2                           80                             86
  CLUS_3                          102                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       61     57     58
  DEL PEAK 29(11P15.5) WILD-TYPE     91     65     35
D59V4, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           61                             91
  CLUS_2                           57                             65
  CLUS_3                           58                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       33     46     18
  DEL PEAK 29(11P15.5) WILD-TYPE     27     27     43
D59V5, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           46                             27
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11P15.5) MUTATED       28     15     38     16
  DEL PEAK 29(11P15.5) WILD-TYPE     26     26     14     31
D59V6, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           28                             26
  CLUS_2                           15                             26
  CLUS_3                           38                             14
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11P15.5) MUTATED       63     67     86     28
  DEL PEAK 29(11P15.5) WILD-TYPE     50     85     68     51
D59V7, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           63                             50
  CLUS_2                           67                             85
  CLUS_3                           86                             68
  CLUS_4                           28                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       98     82     64
  DEL PEAK 29(11P15.5) WILD-TYPE     80    107     67
D59V8, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           98                             80
  CLUS_2                           82                            107
  CLUS_3                           64                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(11P15.5) MUTATED       68     78     55     17     18
  DEL PEAK 29(11P15.5) WILD-TYPE     53     56     66     45     19
D59V9, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           68                             53
  CLUS_2                           78                             56
  CLUS_3                           55                             66
  CLUS_4                           17                             45
  CLUS_5                           18                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11P15.5) MUTATED       39     61    109     27
  DEL PEAK 29(11P15.5) WILD-TYPE     50     57     90     42
D59V10, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           39                             50
  CLUS_2                           61                             57
  CLUS_3                          109                             90
  CLUS_4                           27                             42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       41     63     60
  DEL PEAK 29(11P15.5) WILD-TYPE     48     66     56
D59V11, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           41                             48
  CLUS_2                           63                             66
  CLUS_3                           60                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11P15.5) MUTATED       24     84     56
  DEL PEAK 29(11P15.5) WILD-TYPE     15     67     88
D59V12, multiclass
        clus
vv       DEL PEAK 29(11P15.5) MUTATED DEL PEAK 29(11P15.5) WILD-TYPE
  CLUS_1                           24                             15
  CLUS_2                           84                             67
  CLUS_3                           56                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 30(11Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(11Q22.1) MUTATED       10     18      8      6
  DEL PEAK 30(11Q22.1) WILD-TYPE     32     34     24     22
D60V1, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           18                             34
  CLUS_3                            8                             24
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       13     19     10
  DEL PEAK 30(11Q22.1) WILD-TYPE     34     37     41
D60V2, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           19                             37
  CLUS_3                           10                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       42     68     52
  DEL PEAK 30(11Q22.1) WILD-TYPE    140     98    101
D60V3, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           42                            140
  CLUS_2                           68                             98
  CLUS_3                           52                            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       36     50     41
  DEL PEAK 30(11Q22.1) WILD-TYPE    116     72     52
D60V4, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           36                            116
  CLUS_2                           50                             72
  CLUS_3                           41                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       20     20     11
  DEL PEAK 30(11Q22.1) WILD-TYPE     40     53     50
D60V5, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                           20                             53
  CLUS_3                           11                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(11Q22.1) MUTATED       15     11     14     11
  DEL PEAK 30(11Q22.1) WILD-TYPE     39     30     38     36
D60V6, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           15                             39
  CLUS_2                           11                             30
  CLUS_3                           14                             38
  CLUS_4                           11                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(11Q22.1) MUTATED       34     62     49     16
  DEL PEAK 30(11Q22.1) WILD-TYPE     79     90    105     63
D60V7, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           34                             79
  CLUS_2                           62                             90
  CLUS_3                           49                            105
  CLUS_4                           16                             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       49     74     38
  DEL PEAK 30(11Q22.1) WILD-TYPE    129    115     93
D60V8, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           49                            129
  CLUS_2                           74                            115
  CLUS_3                           38                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(11Q22.1) MUTATED       30     60     31     22     13
  DEL PEAK 30(11Q22.1) WILD-TYPE     91     74     90     40     24
D60V9, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           30                             91
  CLUS_2                           60                             74
  CLUS_3                           31                             90
  CLUS_4                           22                             40
  CLUS_5                           13                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(11Q22.1) MUTATED       38     40     64     14
  DEL PEAK 30(11Q22.1) WILD-TYPE     51     78    135     55
D60V10, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           40                             78
  CLUS_3                           64                            135
  CLUS_4                           14                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       25     43     46
  DEL PEAK 30(11Q22.1) WILD-TYPE     64     86     70
D60V11, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           43                             86
  CLUS_3                           46                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(11Q22.1) MUTATED       12     60     42
  DEL PEAK 30(11Q22.1) WILD-TYPE     27     91    102
D60V12, multiclass
        clus
vv       DEL PEAK 30(11Q22.1) MUTATED DEL PEAK 30(11Q22.1) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                           60                             91
  CLUS_3                           42                            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 31(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11Q25) MUTATED       13     21     11      9
  DEL PEAK 31(11Q25) WILD-TYPE     29     31     21     19
D61V1, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         13                           29
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                          9                           19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       16     22     16
  DEL PEAK 31(11Q25) WILD-TYPE     31     34     35
D61V2, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         16                           31
  CLUS_2                         22                           34
  CLUS_3                         16                           35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       51     77     56
  DEL PEAK 31(11Q25) WILD-TYPE    131     89     97
D61V3, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         51                          131
  CLUS_2                         77                           89
  CLUS_3                         56                           97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       46     51     40
  DEL PEAK 31(11Q25) WILD-TYPE    106     71     53
D61V4, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         46                          106
  CLUS_2                         51                           71
  CLUS_3                         40                           53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       25     22     16
  DEL PEAK 31(11Q25) WILD-TYPE     35     51     45
D61V5, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         22                           51
  CLUS_3                         16                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11Q25) MUTATED       21     12     15     15
  DEL PEAK 31(11Q25) WILD-TYPE     33     29     37     32
D61V6, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         21                           33
  CLUS_2                         12                           29
  CLUS_3                         15                           37
  CLUS_4                         15                           32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11Q25) MUTATED       37     67     60     19
  DEL PEAK 31(11Q25) WILD-TYPE     76     85     94     60
D61V7, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         37                           76
  CLUS_2                         67                           85
  CLUS_3                         60                           94
  CLUS_4                         19                           60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       56     78     49
  DEL PEAK 31(11Q25) WILD-TYPE    122    111     82
D61V8, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         56                          122
  CLUS_2                         78                          111
  CLUS_3                         49                           82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(11Q25) MUTATED       37     63     36     23     13
  DEL PEAK 31(11Q25) WILD-TYPE     84     71     85     39     24
D61V9, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         37                           84
  CLUS_2                         63                           71
  CLUS_3                         36                           85
  CLUS_4                         23                           39
  CLUS_5                         13                           24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11Q25) MUTATED       39     42     73     18
  DEL PEAK 31(11Q25) WILD-TYPE     50     76    126     51
D61V10, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         39                           50
  CLUS_2                         42                           76
  CLUS_3                         73                          126
  CLUS_4                         18                           51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       31     44     49
  DEL PEAK 31(11Q25) WILD-TYPE     58     85     67
D61V11, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         31                           58
  CLUS_2                         44                           85
  CLUS_3                         49                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11Q25) MUTATED       13     65     46
  DEL PEAK 31(11Q25) WILD-TYPE     26     86     98
D61V12, multiclass
        clus
vv       DEL PEAK 31(11Q25) MUTATED DEL PEAK 31(11Q25) WILD-TYPE
  CLUS_1                         13                           26
  CLUS_2                         65                           86
  CLUS_3                         46                           98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 32(12Q24.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(12Q24.31) MUTATED        5      9      4      4
  DEL PEAK 32(12Q24.31) WILD-TYPE     37     43     28     24
D62V1, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                             5                              37
  CLUS_2                             9                              43
  CLUS_3                             4                              28
  CLUS_4                             4                              24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED        5     10      7
  DEL PEAK 32(12Q24.31) WILD-TYPE     42     46     44
D62V2, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                             5                              42
  CLUS_2                            10                              46
  CLUS_3                             7                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED       28     34     24
  DEL PEAK 32(12Q24.31) WILD-TYPE    154    132    129
D62V3, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            28                             154
  CLUS_2                            34                             132
  CLUS_3                            24                             129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED       22     22     21
  DEL PEAK 32(12Q24.31) WILD-TYPE    130    100     72
D62V4, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            22                             130
  CLUS_2                            22                             100
  CLUS_3                            21                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED        5     10     12
  DEL PEAK 32(12Q24.31) WILD-TYPE     55     63     49
D62V5, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                             5                              55
  CLUS_2                            10                              63
  CLUS_3                            12                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(12Q24.31) MUTATED        5      6      9      7
  DEL PEAK 32(12Q24.31) WILD-TYPE     49     35     43     40
D62V6, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                             5                              49
  CLUS_2                             6                              35
  CLUS_3                             9                              43
  CLUS_4                             7                              40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(12Q24.31) MUTATED       23     29     23     11
  DEL PEAK 32(12Q24.31) WILD-TYPE     90    123    131     68
D62V7, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            23                              90
  CLUS_2                            29                             123
  CLUS_3                            23                             131
  CLUS_4                            11                              68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED       34     32     20
  DEL PEAK 32(12Q24.31) WILD-TYPE    144    157    111
D62V8, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            34                             144
  CLUS_2                            32                             157
  CLUS_3                            20                             111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(12Q24.31) MUTATED       17     23     21     14      6
  DEL PEAK 32(12Q24.31) WILD-TYPE    104    111    100     48     31
D62V9, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            17                             104
  CLUS_2                            23                             111
  CLUS_3                            21                             100
  CLUS_4                            14                              48
  CLUS_5                             6                              31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(12Q24.31) MUTATED       15     14     39     13
  DEL PEAK 32(12Q24.31) WILD-TYPE     74    104    160     56
D62V10, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            15                              74
  CLUS_2                            14                             104
  CLUS_3                            39                             160
  CLUS_4                            13                              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED       15     22     27
  DEL PEAK 32(12Q24.31) WILD-TYPE     74    107     89
D62V11, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            15                              74
  CLUS_2                            22                             107
  CLUS_3                            27                              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(12Q24.31) MUTATED       11     31     22
  DEL PEAK 32(12Q24.31) WILD-TYPE     28    120    122
D62V12, multiclass
        clus
vv       DEL PEAK 32(12Q24.31) MUTATED DEL PEAK 32(12Q24.31) WILD-TYPE
  CLUS_1                            11                              28
  CLUS_2                            31                             120
  CLUS_3                            22                             122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 33(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.11) MUTATED       25     36     25     14
  DEL PEAK 33(13Q12.11) WILD-TYPE     17     16      7     14
D63V1, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            25                              17
  CLUS_2                            36                              16
  CLUS_3                            25                               7
  CLUS_4                            14                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED       28     39     33
  DEL PEAK 33(13Q12.11) WILD-TYPE     19     17     18
D63V2, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            28                              19
  CLUS_2                            39                              17
  CLUS_3                            33                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED      107    108    116
  DEL PEAK 33(13Q12.11) WILD-TYPE     75     58     37
D63V3, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                           107                              75
  CLUS_2                           108                              58
  CLUS_3                           116                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED       91     83     66
  DEL PEAK 33(13Q12.11) WILD-TYPE     61     39     27
D63V4, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            91                              61
  CLUS_2                            83                              39
  CLUS_3                            66                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED       40     49     43
  DEL PEAK 33(13Q12.11) WILD-TYPE     20     24     18
D63V5, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            40                              20
  CLUS_2                            49                              24
  CLUS_3                            43                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.11) MUTATED       33     25     37     37
  DEL PEAK 33(13Q12.11) WILD-TYPE     21     16     15     10
D63V6, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            33                              21
  CLUS_2                            25                              16
  CLUS_3                            37                              15
  CLUS_4                            37                              10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.11) MUTATED       71    104    101     53
  DEL PEAK 33(13Q12.11) WILD-TYPE     42     48     53     26
D63V7, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            71                              42
  CLUS_2                           104                              48
  CLUS_3                           101                              53
  CLUS_4                            53                              26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED      119    124     86
  DEL PEAK 33(13Q12.11) WILD-TYPE     59     65     45
D63V8, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                           119                              59
  CLUS_2                           124                              65
  CLUS_3                            86                              45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(13Q12.11) MUTATED       81     96     72     38     27
  DEL PEAK 33(13Q12.11) WILD-TYPE     40     38     49     24     10
D63V9, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            81                              40
  CLUS_2                            96                              38
  CLUS_3                            72                              49
  CLUS_4                            38                              24
  CLUS_5                            27                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.11) MUTATED       61     76    137     40
  DEL PEAK 33(13Q12.11) WILD-TYPE     28     42     62     29
D63V10, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            61                              28
  CLUS_2                            76                              42
  CLUS_3                           137                              62
  CLUS_4                            40                              29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED       47     90     86
  DEL PEAK 33(13Q12.11) WILD-TYPE     42     39     30
D63V11, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            47                              42
  CLUS_2                            90                              39
  CLUS_3                            86                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.11) MUTATED       23    115     85
  DEL PEAK 33(13Q12.11) WILD-TYPE     16     36     59
D63V12, multiclass
        clus
vv       DEL PEAK 33(13Q12.11) MUTATED DEL PEAK 33(13Q12.11) WILD-TYPE
  CLUS_1                            23                              16
  CLUS_2                           115                              36
  CLUS_3                            85                              59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 34(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED       28     31     27     19
  DEL PEAK 34(13Q14.2) WILD-TYPE     14     21      5      9
D64V1, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           31                             21
  CLUS_3                           27                              5
  CLUS_4                           19                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       32     33     40
  DEL PEAK 34(13Q14.2) WILD-TYPE     15     23     11
D64V2, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           33                             23
  CLUS_3                           40                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED      112    112    120
  DEL PEAK 34(13Q14.2) WILD-TYPE     70     54     33
D64V3, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                          112                             70
  CLUS_2                          112                             54
  CLUS_3                          120                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       91     88     69
  DEL PEAK 34(13Q14.2) WILD-TYPE     61     34     24
D64V4, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           91                             61
  CLUS_2                           88                             34
  CLUS_3                           69                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       43     49     45
  DEL PEAK 34(13Q14.2) WILD-TYPE     17     24     16
D64V5, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           43                             17
  CLUS_2                           49                             24
  CLUS_3                           45                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED       36     28     37     36
  DEL PEAK 34(13Q14.2) WILD-TYPE     18     13     15     11
D64V6, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           36                             18
  CLUS_2                           28                             13
  CLUS_3                           37                             15
  CLUS_4                           36                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED       71    103    110     57
  DEL PEAK 34(13Q14.2) WILD-TYPE     42     49     44     22
D64V7, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           71                             42
  CLUS_2                          103                             49
  CLUS_3                          110                             44
  CLUS_4                           57                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED      122    125     94
  DEL PEAK 34(13Q14.2) WILD-TYPE     56     64     37
D64V8, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                          122                             56
  CLUS_2                          125                             64
  CLUS_3                           94                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(13Q14.2) MUTATED       81    101     73     41     29
  DEL PEAK 34(13Q14.2) WILD-TYPE     40     33     48     21      8
D64V9, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           81                             40
  CLUS_2                          101                             33
  CLUS_3                           73                             48
  CLUS_4                           41                             21
  CLUS_5                           29                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED       63     78    144     40
  DEL PEAK 34(13Q14.2) WILD-TYPE     26     40     55     29
D64V10, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           63                             26
  CLUS_2                           78                             40
  CLUS_3                          144                             55
  CLUS_4                           40                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       48     95     88
  DEL PEAK 34(13Q14.2) WILD-TYPE     41     34     28
D64V11, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           48                             41
  CLUS_2                           95                             34
  CLUS_3                           88                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       24    116     91
  DEL PEAK 34(13Q14.2) WILD-TYPE     15     35     53
D64V12, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           24                             15
  CLUS_2                          116                             35
  CLUS_3                           91                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 35(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q11.2) MUTATED        7     21     14     10
  DEL PEAK 35(14Q11.2) WILD-TYPE     35     31     18     18
D65V1, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                            7                             35
  CLUS_2                           21                             31
  CLUS_3                           14                             18
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED        9     22     21
  DEL PEAK 35(14Q11.2) WILD-TYPE     38     34     30
D65V2, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                            9                             38
  CLUS_2                           22                             34
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED       58     62     55
  DEL PEAK 35(14Q11.2) WILD-TYPE    124    104     98
D65V3, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           58                            124
  CLUS_2                           62                            104
  CLUS_3                           55                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED       53     46     31
  DEL PEAK 35(14Q11.2) WILD-TYPE     99     76     62
D65V4, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           53                             99
  CLUS_2                           46                             76
  CLUS_3                           31                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED       27     23     25
  DEL PEAK 35(14Q11.2) WILD-TYPE     33     50     36
D65V5, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           23                             50
  CLUS_3                           25                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q11.2) MUTATED       27     16     15     17
  DEL PEAK 35(14Q11.2) WILD-TYPE     27     25     37     30
D65V6, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           27                             27
  CLUS_2                           16                             25
  CLUS_3                           15                             37
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q11.2) MUTATED       25     57     71     20
  DEL PEAK 35(14Q11.2) WILD-TYPE     88     95     83     59
D65V7, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           25                             88
  CLUS_2                           57                             95
  CLUS_3                           71                             83
  CLUS_4                           20                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED       43     69     61
  DEL PEAK 35(14Q11.2) WILD-TYPE    135    120     70
D65V8, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           43                            135
  CLUS_2                           69                            120
  CLUS_3                           61                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(14Q11.2) MUTATED       42     47     32     32     13
  DEL PEAK 35(14Q11.2) WILD-TYPE     79     87     89     30     24
D65V9, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           42                             79
  CLUS_2                           47                             87
  CLUS_3                           32                             89
  CLUS_4                           32                             30
  CLUS_5                           13                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q11.2) MUTATED       42     42     67     15
  DEL PEAK 35(14Q11.2) WILD-TYPE     47     76    132     54
D65V10, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           42                             47
  CLUS_2                           42                             76
  CLUS_3                           67                            132
  CLUS_4                           15                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED       18     57     45
  DEL PEAK 35(14Q11.2) WILD-TYPE     71     72     71
D65V11, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                           18                             71
  CLUS_2                           57                             72
  CLUS_3                           45                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q11.2) MUTATED        7     60     53
  DEL PEAK 35(14Q11.2) WILD-TYPE     32     91     91
D65V12, multiclass
        clus
vv       DEL PEAK 35(14Q11.2) MUTATED DEL PEAK 35(14Q11.2) WILD-TYPE
  CLUS_1                            7                             32
  CLUS_2                           60                             91
  CLUS_3                           53                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 36(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(15Q11.2) MUTATED       15     18     13     14
  DEL PEAK 36(15Q11.2) WILD-TYPE     27     34     19     14
D66V1, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           18                             34
  CLUS_3                           13                             19
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       16     21     23
  DEL PEAK 36(15Q11.2) WILD-TYPE     31     35     28
D66V2, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           16                             31
  CLUS_2                           21                             35
  CLUS_3                           23                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       51     61     55
  DEL PEAK 36(15Q11.2) WILD-TYPE    131    105     98
D66V3, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           51                            131
  CLUS_2                           61                            105
  CLUS_3                           55                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       48     33     36
  DEL PEAK 36(15Q11.2) WILD-TYPE    104     89     57
D66V4, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           48                            104
  CLUS_2                           33                             89
  CLUS_3                           36                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       26     24     15
  DEL PEAK 36(15Q11.2) WILD-TYPE     34     49     46
D66V5, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           15                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(15Q11.2) MUTATED       22      6     20     17
  DEL PEAK 36(15Q11.2) WILD-TYPE     32     35     32     30
D66V6, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                            6                             35
  CLUS_3                           20                             32
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(15Q11.2) MUTATED       38     43     61     24
  DEL PEAK 36(15Q11.2) WILD-TYPE     75    109     93     55
D66V7, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           38                             75
  CLUS_2                           43                            109
  CLUS_3                           61                             93
  CLUS_4                           24                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       58     54     54
  DEL PEAK 36(15Q11.2) WILD-TYPE    120    135     77
D66V8, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           58                            120
  CLUS_2                           54                            135
  CLUS_3                           54                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(15Q11.2) MUTATED       50     50     30     15     14
  DEL PEAK 36(15Q11.2) WILD-TYPE     71     84     91     47     23
D66V9, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           50                             71
  CLUS_2                           50                             84
  CLUS_3                           30                             91
  CLUS_4                           15                             47
  CLUS_5                           14                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(15Q11.2) MUTATED       31     39     71     18
  DEL PEAK 36(15Q11.2) WILD-TYPE     58     79    128     51
D66V10, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           31                             58
  CLUS_2                           39                             79
  CLUS_3                           71                            128
  CLUS_4                           18                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED       23     38     42
  DEL PEAK 36(15Q11.2) WILD-TYPE     66     91     74
D66V11, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                           38                             91
  CLUS_3                           42                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(15Q11.2) MUTATED        9     55     39
  DEL PEAK 36(15Q11.2) WILD-TYPE     30     96    105
D66V12, multiclass
        clus
vv       DEL PEAK 36(15Q11.2) MUTATED DEL PEAK 36(15Q11.2) WILD-TYPE
  CLUS_1                            9                             30
  CLUS_2                           55                             96
  CLUS_3                           39                            105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 37(15Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q21.1) MUTATED       14     17     12     14
  DEL PEAK 37(15Q21.1) WILD-TYPE     28     35     20     14
D67V1, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           17                             35
  CLUS_3                           12                             20
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       16     20     21
  DEL PEAK 37(15Q21.1) WILD-TYPE     31     36     30
D67V2, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           16                             31
  CLUS_2                           20                             36
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       47     62     60
  DEL PEAK 37(15Q21.1) WILD-TYPE    135    104     93
D67V3, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           47                            135
  CLUS_2                           62                            104
  CLUS_3                           60                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       45     41     36
  DEL PEAK 37(15Q21.1) WILD-TYPE    107     81     57
D67V4, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           45                            107
  CLUS_2                           41                             81
  CLUS_3                           36                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       26     24     15
  DEL PEAK 37(15Q21.1) WILD-TYPE     34     49     46
D67V5, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           15                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q21.1) MUTATED       23      5     20     17
  DEL PEAK 37(15Q21.1) WILD-TYPE     31     36     32     30
D67V6, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                            5                             36
  CLUS_3                           20                             32
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q21.1) MUTATED       37     48     61     22
  DEL PEAK 37(15Q21.1) WILD-TYPE     76    104     93     57
D67V7, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           37                             76
  CLUS_2                           48                            104
  CLUS_3                           61                             93
  CLUS_4                           22                             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       56     60     52
  DEL PEAK 37(15Q21.1) WILD-TYPE    122    129     79
D67V8, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           56                            122
  CLUS_2                           60                            129
  CLUS_3                           52                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(15Q21.1) MUTATED       46     53     27     16     18
  DEL PEAK 37(15Q21.1) WILD-TYPE     75     81     94     46     19
D67V9, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           46                             75
  CLUS_2                           53                             81
  CLUS_3                           27                             94
  CLUS_4                           16                             46
  CLUS_5                           18                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q21.1) MUTATED       32     38     75     15
  DEL PEAK 37(15Q21.1) WILD-TYPE     57     80    124     54
D67V10, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           32                             57
  CLUS_2                           38                             80
  CLUS_3                           75                            124
  CLUS_4                           15                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       25     40     43
  DEL PEAK 37(15Q21.1) WILD-TYPE     64     89     73
D67V11, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           40                             89
  CLUS_3                           43                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q21.1) MUTATED       11     57     40
  DEL PEAK 37(15Q21.1) WILD-TYPE     28     94    104
D67V12, multiclass
        clus
vv       DEL PEAK 37(15Q21.1) MUTATED DEL PEAK 37(15Q21.1) WILD-TYPE
  CLUS_1                           11                             28
  CLUS_2                           57                             94
  CLUS_3                           40                            104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 38(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P13.3) MUTATED       17     22      7     10
  DEL PEAK 38(16P13.3) WILD-TYPE     25     30     25     18
D68V1, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           22                             30
  CLUS_3                            7                             25
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       19     22     15
  DEL PEAK 38(16P13.3) WILD-TYPE     28     34     36
D68V2, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           22                             34
  CLUS_3                           15                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       51     69     67
  DEL PEAK 38(16P13.3) WILD-TYPE    131     97     86
D68V3, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           51                            131
  CLUS_2                           69                             97
  CLUS_3                           67                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       49     52     40
  DEL PEAK 38(16P13.3) WILD-TYPE    103     70     53
D68V4, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           49                            103
  CLUS_2                           52                             70
  CLUS_3                           40                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       26     26     17
  DEL PEAK 38(16P13.3) WILD-TYPE     34     47     44
D68V5, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           26                             47
  CLUS_3                           17                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P13.3) MUTATED       23     13     21     12
  DEL PEAK 38(16P13.3) WILD-TYPE     31     28     31     35
D68V6, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                           13                             28
  CLUS_3                           21                             31
  CLUS_4                           12                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P13.3) MUTATED       39     61     61     25
  DEL PEAK 38(16P13.3) WILD-TYPE     74     91     93     54
D68V7, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           39                             74
  CLUS_2                           61                             91
  CLUS_3                           61                             93
  CLUS_4                           25                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       65     70     51
  DEL PEAK 38(16P13.3) WILD-TYPE    113    119     80
D68V8, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           65                            113
  CLUS_2                           70                            119
  CLUS_3                           51                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(16P13.3) MUTATED       41     53     38     26     19
  DEL PEAK 38(16P13.3) WILD-TYPE     80     81     83     36     18
D68V9, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           41                             80
  CLUS_2                           53                             81
  CLUS_3                           38                             83
  CLUS_4                           26                             36
  CLUS_5                           19                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P13.3) MUTATED       33     45     78     21
  DEL PEAK 38(16P13.3) WILD-TYPE     56     73    121     48
D68V10, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           33                             56
  CLUS_2                           45                             73
  CLUS_3                           78                            121
  CLUS_4                           21                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       25     45     56
  DEL PEAK 38(16P13.3) WILD-TYPE     64     84     60
D68V11, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           45                             84
  CLUS_3                           56                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P13.3) MUTATED       11     66     49
  DEL PEAK 38(16P13.3) WILD-TYPE     28     85     95
D68V12, multiclass
        clus
vv       DEL PEAK 38(16P13.3) MUTATED DEL PEAK 38(16P13.3) WILD-TYPE
  CLUS_1                           11                             28
  CLUS_2                           66                             85
  CLUS_3                           49                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 39(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       16     23     12     11
  DEL PEAK 39(16Q23.1) WILD-TYPE     26     29     20     17
D69V1, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           23                             29
  CLUS_3                           12                             20
  CLUS_4                           11                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       13     26     23
  DEL PEAK 39(16Q23.1) WILD-TYPE     34     30     28
D69V2, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           26                             30
  CLUS_3                           23                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       62     82     66
  DEL PEAK 39(16Q23.1) WILD-TYPE    120     84     87
D69V3, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           62                            120
  CLUS_2                           82                             84
  CLUS_3                           66                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       58     50     45
  DEL PEAK 39(16Q23.1) WILD-TYPE     94     72     48
D69V4, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           58                             94
  CLUS_2                           50                             72
  CLUS_3                           45                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       29     27     23
  DEL PEAK 39(16Q23.1) WILD-TYPE     31     46     38
D69V5, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           23                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       24     16     19     20
  DEL PEAK 39(16Q23.1) WILD-TYPE     30     25     33     27
D69V6, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           24                             30
  CLUS_2                           16                             25
  CLUS_3                           19                             33
  CLUS_4                           20                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       40     70     72     26
  DEL PEAK 39(16Q23.1) WILD-TYPE     73     82     82     53
D69V7, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           40                             73
  CLUS_2                           70                             82
  CLUS_3                           72                             82
  CLUS_4                           26                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       61     88     59
  DEL PEAK 39(16Q23.1) WILD-TYPE    117    101     72
D69V8, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           61                            117
  CLUS_2                           88                            101
  CLUS_3                           59                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(16Q23.1) MUTATED       46     62     40     29     24
  DEL PEAK 39(16Q23.1) WILD-TYPE     75     72     81     33     13
D69V9, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           46                             75
  CLUS_2                           62                             72
  CLUS_3                           40                             81
  CLUS_4                           29                             33
  CLUS_5                           24                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       39     52     87     23
  DEL PEAK 39(16Q23.1) WILD-TYPE     50     66    112     46
D69V10, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           39                             50
  CLUS_2                           52                             66
  CLUS_3                           87                            112
  CLUS_4                           23                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       22     60     59
  DEL PEAK 39(16Q23.1) WILD-TYPE     67     69     57
D69V11, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           22                             67
  CLUS_2                           60                             69
  CLUS_3                           59                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       10     81     50
  DEL PEAK 39(16Q23.1) WILD-TYPE     29     70     94
D69V12, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                           81                             70
  CLUS_3                           50                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 40(17P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED       29     28     15     15
  DEL PEAK 40(17P11.2) WILD-TYPE     13     24     17     13
D70V1, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           29                             13
  CLUS_2                           28                             24
  CLUS_3                           15                             17
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       32     31     24
  DEL PEAK 40(17P11.2) WILD-TYPE     15     25     27
D70V2, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           31                             25
  CLUS_3                           24                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       83     87    102
  DEL PEAK 40(17P11.2) WILD-TYPE     99     79     51
D70V3, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           83                             99
  CLUS_2                           87                             79
  CLUS_3                          102                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       78     63     53
  DEL PEAK 40(17P11.2) WILD-TYPE     74     59     40
D70V4, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           78                             74
  CLUS_2                           63                             59
  CLUS_3                           53                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       35     35     25
  DEL PEAK 40(17P11.2) WILD-TYPE     25     38     36
D70V5, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           35                             25
  CLUS_2                           35                             38
  CLUS_3                           25                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED       35     14     28     18
  DEL PEAK 40(17P11.2) WILD-TYPE     19     27     24     29
D70V6, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           35                             19
  CLUS_2                           14                             27
  CLUS_3                           28                             24
  CLUS_4                           18                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED       67     72     91     41
  DEL PEAK 40(17P11.2) WILD-TYPE     46     80     63     38
D70V7, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           67                             46
  CLUS_2                           72                             80
  CLUS_3                           91                             63
  CLUS_4                           41                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED      112     92     67
  DEL PEAK 40(17P11.2) WILD-TYPE     66     97     64
D70V8, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                          112                             66
  CLUS_2                           92                             97
  CLUS_3                           67                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(17P11.2) MUTATED       68     77     60     31     25
  DEL PEAK 40(17P11.2) WILD-TYPE     53     57     61     31     12
D70V9, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           68                             53
  CLUS_2                           77                             57
  CLUS_3                           60                             61
  CLUS_4                           31                             31
  CLUS_5                           25                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED       42     67    122     30
  DEL PEAK 40(17P11.2) WILD-TYPE     47     51     77     39
D70V10, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           42                             47
  CLUS_2                           67                             51
  CLUS_3                          122                             77
  CLUS_4                           30                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       47     64     70
  DEL PEAK 40(17P11.2) WILD-TYPE     42     65     46
D70V11, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           47                             42
  CLUS_2                           64                             65
  CLUS_3                           70                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       25     86     70
  DEL PEAK 40(17P11.2) WILD-TYPE     14     65     74
D70V12, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           25                             14
  CLUS_2                           86                             65
  CLUS_3                           70                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 41(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       21      5     11      6
  DEL PEAK 41(17Q11.2) WILD-TYPE     21     47     21     22
D71V1, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                            5                             47
  CLUS_3                           11                             21
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       21      5     17
  DEL PEAK 41(17Q11.2) WILD-TYPE     26     51     34
D71V2, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                            5                             51
  CLUS_3                           17                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       50     17     65
  DEL PEAK 41(17Q11.2) WILD-TYPE    132    149     88
D71V3, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           50                            132
  CLUS_2                           17                            149
  CLUS_3                           65                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       49     14     29
  DEL PEAK 41(17Q11.2) WILD-TYPE    103    108     64
D71V4, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           49                            103
  CLUS_2                           14                            108
  CLUS_3                           29                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       11     21     15
  DEL PEAK 41(17Q11.2) WILD-TYPE     49     52     46
D71V5, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           11                             49
  CLUS_2                           21                             52
  CLUS_3                           15                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       14     10     15      8
  DEL PEAK 41(17Q11.2) WILD-TYPE     40     31     37     39
D71V6, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           14                             40
  CLUS_2                           10                             31
  CLUS_3                           15                             37
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       43     13     50     25
  DEL PEAK 41(17Q11.2) WILD-TYPE     70    139    104     54
D71V7, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           43                             70
  CLUS_2                           13                            139
  CLUS_3                           50                            104
  CLUS_4                           25                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       74     19     38
  DEL PEAK 41(17Q11.2) WILD-TYPE    104    170     93
D71V8, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           74                            104
  CLUS_2                           19                            170
  CLUS_3                           38                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(17Q11.2) MUTATED       37     26     39     10     16
  DEL PEAK 41(17Q11.2) WILD-TYPE     84    108     82     52     21
D71V9, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           37                             84
  CLUS_2                           26                            108
  CLUS_3                           39                             82
  CLUS_4                           10                             52
  CLUS_5                           16                             21
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       12     27     64     25
  DEL PEAK 41(17Q11.2) WILD-TYPE     77     91    135     44
D71V10, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           12                             77
  CLUS_2                           27                             91
  CLUS_3                           64                            135
  CLUS_4                           25                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       29     30     29
  DEL PEAK 41(17Q11.2) WILD-TYPE     60     99     87
D71V11, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           29                             60
  CLUS_2                           30                             99
  CLUS_3                           29                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       17     25     46
  DEL PEAK 41(17Q11.2) WILD-TYPE     22    126     98
D71V12, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           17                             22
  CLUS_2                           25                            126
  CLUS_3                           46                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 42(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17Q25.3) MUTATED       16      5      7      3
  DEL PEAK 42(17Q25.3) WILD-TYPE     26     47     25     25
D72V1, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                            5                             47
  CLUS_3                            7                             25
  CLUS_4                            3                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       15      5     11
  DEL PEAK 42(17Q25.3) WILD-TYPE     32     51     40
D72V2, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                            5                             51
  CLUS_3                           11                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       37     18     47
  DEL PEAK 42(17Q25.3) WILD-TYPE    145    148    106
D72V3, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           37                            145
  CLUS_2                           18                            148
  CLUS_3                           47                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       34     15     25
  DEL PEAK 42(17Q25.3) WILD-TYPE    118    107     68
D72V4, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           34                            118
  CLUS_2                           15                            107
  CLUS_3                           25                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       12     17     10
  DEL PEAK 42(17Q25.3) WILD-TYPE     48     56     51
D72V5, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           17                             56
  CLUS_3                           10                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17Q25.3) MUTATED       11      8     10     10
  DEL PEAK 42(17Q25.3) WILD-TYPE     43     33     42     37
D72V6, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           11                             43
  CLUS_2                            8                             33
  CLUS_3                           10                             42
  CLUS_4                           10                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17Q25.3) MUTATED       35     18     35     14
  DEL PEAK 42(17Q25.3) WILD-TYPE     78    134    119     65
D72V7, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           35                             78
  CLUS_2                           18                            134
  CLUS_3                           35                            119
  CLUS_4                           14                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       51     25     26
  DEL PEAK 42(17Q25.3) WILD-TYPE    127    164    105
D72V8, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           51                            127
  CLUS_2                           25                            164
  CLUS_3                           26                            105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(17Q25.3) MUTATED       25     24     30     11      9
  DEL PEAK 42(17Q25.3) WILD-TYPE     96    110     91     51     28
D72V9, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           25                             96
  CLUS_2                           24                            110
  CLUS_3                           30                             91
  CLUS_4                           11                             51
  CLUS_5                            9                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17Q25.3) MUTATED        8     28     48     15
  DEL PEAK 42(17Q25.3) WILD-TYPE     81     90    151     54
D72V10, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                            8                             81
  CLUS_2                           28                             90
  CLUS_3                           48                            151
  CLUS_4                           15                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       21     25     24
  DEL PEAK 42(17Q25.3) WILD-TYPE     68    104     92
D72V11, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           21                             68
  CLUS_2                           25                            104
  CLUS_3                           24                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17Q25.3) MUTATED       10     24     36
  DEL PEAK 42(17Q25.3) WILD-TYPE     29    127    108
D72V12, multiclass
        clus
vv       DEL PEAK 42(17Q25.3) MUTATED DEL PEAK 42(17Q25.3) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                           24                            127
  CLUS_3                           36                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 43(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q23) MUTATED       23     23     14     11
  DEL PEAK 43(18Q23) WILD-TYPE     19     29     18     17
D73V1, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         23                           19
  CLUS_2                         23                           29
  CLUS_3                         14                           18
  CLUS_4                         11                           17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       27     24     20
  DEL PEAK 43(18Q23) WILD-TYPE     20     32     31
D73V2, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         27                           20
  CLUS_2                         24                           32
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       68     84     82
  DEL PEAK 43(18Q23) WILD-TYPE    114     82     71
D73V3, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         68                          114
  CLUS_2                         84                           82
  CLUS_3                         82                           71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       69     66     41
  DEL PEAK 43(18Q23) WILD-TYPE     83     56     52
D73V4, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         69                           83
  CLUS_2                         66                           56
  CLUS_3                         41                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       26     34     29
  DEL PEAK 43(18Q23) WILD-TYPE     34     39     32
D73V5, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         26                           34
  CLUS_2                         34                           39
  CLUS_3                         29                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q23) MUTATED       21     15     28     25
  DEL PEAK 43(18Q23) WILD-TYPE     33     26     24     22
D73V6, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         21                           33
  CLUS_2                         15                           26
  CLUS_3                         28                           24
  CLUS_4                         25                           22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q23) MUTATED       55     74     69     34
  DEL PEAK 43(18Q23) WILD-TYPE     58     78     85     45
D73V7, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         55                           58
  CLUS_2                         74                           78
  CLUS_3                         69                           85
  CLUS_4                         34                           45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       86     91     55
  DEL PEAK 43(18Q23) WILD-TYPE     92     98     76
D73V8, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         86                           92
  CLUS_2                         91                           98
  CLUS_3                         55                           76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(18Q23) MUTATED       58     70     51     26     18
  DEL PEAK 43(18Q23) WILD-TYPE     63     64     70     36     19
D73V9, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         58                           63
  CLUS_2                         70                           64
  CLUS_3                         51                           70
  CLUS_4                         26                           36
  CLUS_5                         18                           19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q23) MUTATED       43     55     98     27
  DEL PEAK 43(18Q23) WILD-TYPE     46     63    101     42
D73V10, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         43                           46
  CLUS_2                         55                           63
  CLUS_3                         98                          101
  CLUS_4                         27                           42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       39     55     64
  DEL PEAK 43(18Q23) WILD-TYPE     50     74     52
D73V11, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         39                           50
  CLUS_2                         55                           74
  CLUS_3                         64                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q23) MUTATED       19     75     64
  DEL PEAK 43(18Q23) WILD-TYPE     20     76     80
D73V12, multiclass
        clus
vv       DEL PEAK 43(18Q23) MUTATED DEL PEAK 43(18Q23) WILD-TYPE
  CLUS_1                         19                           20
  CLUS_2                         75                           76
  CLUS_3                         64                           80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 44(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       20     24     17     18
  DEL PEAK 44(19P13.3) WILD-TYPE     22     28     15     10
D74V1, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           24                             28
  CLUS_3                           17                             15
  CLUS_4                           18                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       23     25     31
  DEL PEAK 44(19P13.3) WILD-TYPE     24     31     20
D74V2, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           25                             31
  CLUS_3                           31                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       67     76     93
  DEL PEAK 44(19P13.3) WILD-TYPE    115     90     60
D74V3, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           67                            115
  CLUS_2                           76                             90
  CLUS_3                           93                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       68     56     44
  DEL PEAK 44(19P13.3) WILD-TYPE     84     66     49
D74V4, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           68                             84
  CLUS_2                           56                             66
  CLUS_3                           44                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       31     41     23
  DEL PEAK 44(19P13.3) WILD-TYPE     29     32     38
D74V5, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           41                             32
  CLUS_3                           23                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       23     17     32     23
  DEL PEAK 44(19P13.3) WILD-TYPE     31     24     20     24
D74V6, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                           17                             24
  CLUS_3                           32                             20
  CLUS_4                           23                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       55     59     83     38
  DEL PEAK 44(19P13.3) WILD-TYPE     58     93     71     41
D74V7, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           55                             58
  CLUS_2                           59                             93
  CLUS_3                           83                             71
  CLUS_4                           38                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       86     76     73
  DEL PEAK 44(19P13.3) WILD-TYPE     92    113     58
D74V8, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           86                             92
  CLUS_2                           76                            113
  CLUS_3                           73                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(19P13.3) MUTATED       65     64     52     23     20
  DEL PEAK 44(19P13.3) WILD-TYPE     56     70     69     39     17
D74V9, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           65                             56
  CLUS_2                           64                             70
  CLUS_3                           52                             69
  CLUS_4                           23                             39
  CLUS_5                           20                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       30     57    112     25
  DEL PEAK 44(19P13.3) WILD-TYPE     59     61     87     44
D74V10, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           30                             59
  CLUS_2                           57                             61
  CLUS_3                          112                             87
  CLUS_4                           25                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       38     61     53
  DEL PEAK 44(19P13.3) WILD-TYPE     51     68     63
D74V11, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           61                             68
  CLUS_3                           53                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       23     73     56
  DEL PEAK 44(19P13.3) WILD-TYPE     16     78     88
D74V12, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           23                             16
  CLUS_2                           73                             78
  CLUS_3                           56                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 45(19Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.32) MUTATED       11     18      9      9
  DEL PEAK 45(19Q13.32) WILD-TYPE     31     34     23     19
D75V1, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            11                              31
  CLUS_2                            18                              34
  CLUS_3                             9                              23
  CLUS_4                             9                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       13     20     14
  DEL PEAK 45(19Q13.32) WILD-TYPE     34     36     37
D75V2, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            20                              36
  CLUS_3                            14                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       32     73     44
  DEL PEAK 45(19Q13.32) WILD-TYPE    150     93    109
D75V3, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            32                             150
  CLUS_2                            73                              93
  CLUS_3                            44                             109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       26     46     35
  DEL PEAK 45(19Q13.32) WILD-TYPE    126     76     58
D75V4, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            26                             126
  CLUS_2                            46                              76
  CLUS_3                            35                              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       21     15     18
  DEL PEAK 45(19Q13.32) WILD-TYPE     39     58     43
D75V5, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            21                              39
  CLUS_2                            15                              58
  CLUS_3                            18                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.32) MUTATED       13     10     14     17
  DEL PEAK 45(19Q13.32) WILD-TYPE     41     31     38     30
D75V6, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            13                              41
  CLUS_2                            10                              31
  CLUS_3                            14                              38
  CLUS_4                            17                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.32) MUTATED       28     61     39     21
  DEL PEAK 45(19Q13.32) WILD-TYPE     85     91    115     58
D75V7, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            28                              85
  CLUS_2                            61                              91
  CLUS_3                            39                             115
  CLUS_4                            21                              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       42     72     35
  DEL PEAK 45(19Q13.32) WILD-TYPE    136    117     96
D75V8, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            42                             136
  CLUS_2                            72                             117
  CLUS_3                            35                              96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(19Q13.32) MUTATED       35     50     24     21     11
  DEL PEAK 45(19Q13.32) WILD-TYPE     86     84     97     41     26
D75V9, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            35                              86
  CLUS_2                            50                              84
  CLUS_3                            24                              97
  CLUS_4                            21                              41
  CLUS_5                            11                              26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.32) MUTATED       25     41     58     17
  DEL PEAK 45(19Q13.32) WILD-TYPE     64     77    141     52
D75V10, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            25                              64
  CLUS_2                            41                              77
  CLUS_3                            58                             141
  CLUS_4                            17                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED       16     42     41
  DEL PEAK 45(19Q13.32) WILD-TYPE     73     87     75
D75V11, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                            16                              73
  CLUS_2                            42                              87
  CLUS_3                            41                              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.32) MUTATED        7     51     41
  DEL PEAK 45(19Q13.32) WILD-TYPE     32    100    103
D75V12, multiclass
        clus
vv       DEL PEAK 45(19Q13.32) MUTATED DEL PEAK 45(19Q13.32) WILD-TYPE
  CLUS_1                             7                              32
  CLUS_2                            51                             100
  CLUS_3                            41                             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 46(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(21Q11.2) MUTATED       21     27     15     10
  DEL PEAK 46(21Q11.2) WILD-TYPE     21     25     17     18
D76V1, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           27                             25
  CLUS_3                           15                             17
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       24     28     21
  DEL PEAK 46(21Q11.2) WILD-TYPE     23     28     30
D76V2, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           28                             28
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       66     92     88
  DEL PEAK 46(21Q11.2) WILD-TYPE    116     74     65
D76V3, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           66                            116
  CLUS_2                           92                             74
  CLUS_3                           88                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       67     66     49
  DEL PEAK 46(21Q11.2) WILD-TYPE     85     56     44
D76V4, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           67                             85
  CLUS_2                           66                             56
  CLUS_3                           49                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       26     33     27
  DEL PEAK 46(21Q11.2) WILD-TYPE     34     40     34
D76V5, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           33                             40
  CLUS_3                           27                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(21Q11.2) MUTATED       21     18     26     21
  DEL PEAK 46(21Q11.2) WILD-TYPE     33     23     26     26
D76V6, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           21                             33
  CLUS_2                           18                             23
  CLUS_3                           26                             26
  CLUS_4                           21                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(21Q11.2) MUTATED       50     81     83     31
  DEL PEAK 46(21Q11.2) WILD-TYPE     63     71     71     48
D76V7, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           50                             63
  CLUS_2                           81                             71
  CLUS_3                           83                             71
  CLUS_4                           31                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       81     97     67
  DEL PEAK 46(21Q11.2) WILD-TYPE     97     92     64
D76V8, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           81                             97
  CLUS_2                           97                             92
  CLUS_3                           67                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(21Q11.2) MUTATED       61     79     47     23     25
  DEL PEAK 46(21Q11.2) WILD-TYPE     60     55     74     39     12
D76V9, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           61                             60
  CLUS_2                           79                             55
  CLUS_3                           47                             74
  CLUS_4                           23                             39
  CLUS_5                           25                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(21Q11.2) MUTATED       42     66    109     18
  DEL PEAK 46(21Q11.2) WILD-TYPE     47     52     90     51
D76V10, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           42                             47
  CLUS_2                           66                             52
  CLUS_3                          109                             90
  CLUS_4                           18                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       39     61     65
  DEL PEAK 46(21Q11.2) WILD-TYPE     50     68     51
D76V11, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           39                             50
  CLUS_2                           61                             68
  CLUS_3                           65                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(21Q11.2) MUTATED       22     85     58
  DEL PEAK 46(21Q11.2) WILD-TYPE     17     66     86
D76V12, multiclass
        clus
vv       DEL PEAK 46(21Q11.2) MUTATED DEL PEAK 46(21Q11.2) WILD-TYPE
  CLUS_1                           22                             17
  CLUS_2                           85                             66
  CLUS_3                           58                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 47(21Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q22.3) MUTATED       25     35     19     16
  DEL PEAK 47(21Q22.3) WILD-TYPE     17     17     13     12
D77V1, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           25                             17
  CLUS_2                           35                             17
  CLUS_3                           19                             13
  CLUS_4                           16                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       30     39     26
  DEL PEAK 47(21Q22.3) WILD-TYPE     17     17     25
D77V2, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           30                             17
  CLUS_2                           39                             17
  CLUS_3                           26                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       71    110    100
  DEL PEAK 47(21Q22.3) WILD-TYPE    111     56     53
D77V3, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           71                            111
  CLUS_2                          110                             56
  CLUS_3                          100                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       68     78     53
  DEL PEAK 47(21Q22.3) WILD-TYPE     84     44     40
D77V4, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           68                             84
  CLUS_2                           78                             44
  CLUS_3                           53                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       34     43     30
  DEL PEAK 47(21Q22.3) WILD-TYPE     26     30     31
D77V5, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           43                             30
  CLUS_3                           30                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q22.3) MUTATED       25     18     33     31
  DEL PEAK 47(21Q22.3) WILD-TYPE     29     23     19     16
D77V6, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           25                             29
  CLUS_2                           18                             23
  CLUS_3                           33                             19
  CLUS_4                           31                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q22.3) MUTATED       59     95     87     38
  DEL PEAK 47(21Q22.3) WILD-TYPE     54     57     67     41
D77V7, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           59                             54
  CLUS_2                           95                             57
  CLUS_3                           87                             67
  CLUS_4                           38                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       92    118     69
  DEL PEAK 47(21Q22.3) WILD-TYPE     86     71     62
D77V8, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           92                             86
  CLUS_2                          118                             71
  CLUS_3                           69                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(21Q22.3) MUTATED       78     79     53     34     25
  DEL PEAK 47(21Q22.3) WILD-TYPE     43     55     68     28     12
D77V9, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           78                             43
  CLUS_2                           79                             55
  CLUS_3                           53                             68
  CLUS_4                           34                             28
  CLUS_5                           25                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q22.3) MUTATED       55     70    121     23
  DEL PEAK 47(21Q22.3) WILD-TYPE     34     48     78     46
D77V10, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           55                             34
  CLUS_2                           70                             48
  CLUS_3                          121                             78
  CLUS_4                           23                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       38     67     73
  DEL PEAK 47(21Q22.3) WILD-TYPE     51     62     43
D77V11, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           38                             51
  CLUS_2                           67                             62
  CLUS_3                           73                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q22.3) MUTATED       21     91     66
  DEL PEAK 47(21Q22.3) WILD-TYPE     18     60     78
D77V12, multiclass
        clus
vv       DEL PEAK 47(21Q22.3) MUTATED DEL PEAK 47(21Q22.3) WILD-TYPE
  CLUS_1                           21                             18
  CLUS_2                           91                             60
  CLUS_3                           66                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 48(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(22Q11.21) MUTATED        4     11      8     11
  DEL PEAK 48(22Q11.21) WILD-TYPE     38     41     24     17
D78V1, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                             4                              38
  CLUS_2                            11                              41
  CLUS_3                             8                              24
  CLUS_4                            11                              17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED        6     12     16
  DEL PEAK 48(22Q11.21) WILD-TYPE     41     44     35
D78V2, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                             6                              41
  CLUS_2                            12                              44
  CLUS_3                            16                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED       43     27     25
  DEL PEAK 48(22Q11.21) WILD-TYPE    139    139    128
D78V3, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            43                             139
  CLUS_2                            27                             139
  CLUS_3                            25                             128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED       35     16     15
  DEL PEAK 48(22Q11.21) WILD-TYPE    117    106     78
D78V4, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            35                             117
  CLUS_2                            16                             106
  CLUS_3                            15                              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED       14     13      6
  DEL PEAK 48(22Q11.21) WILD-TYPE     46     60     55
D78V5, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            13                              60
  CLUS_3                             6                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(22Q11.21) MUTATED       13      6      9      5
  DEL PEAK 48(22Q11.21) WILD-TYPE     41     35     43     42
D78V6, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            13                              41
  CLUS_2                             6                              35
  CLUS_3                             9                              43
  CLUS_4                             5                              42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(22Q11.21) MUTATED       20     22     38     15
  DEL PEAK 48(22Q11.21) WILD-TYPE     93    130    116     64
D78V7, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            20                              93
  CLUS_2                            22                             130
  CLUS_3                            38                             116
  CLUS_4                            15                              64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED       23     31     41
  DEL PEAK 48(22Q11.21) WILD-TYPE    155    158     90
D78V8, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            23                             155
  CLUS_2                            31                             158
  CLUS_3                            41                              90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(22Q11.21) MUTATED       25     21     21     14      6
  DEL PEAK 48(22Q11.21) WILD-TYPE     96    113    100     48     31
D78V9, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            25                              96
  CLUS_2                            21                             113
  CLUS_3                            21                             100
  CLUS_4                            14                              48
  CLUS_5                             6                              31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(22Q11.21) MUTATED       15     27     36      9
  DEL PEAK 48(22Q11.21) WILD-TYPE     74     91    163     60
D78V10, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            15                              74
  CLUS_2                            27                              91
  CLUS_3                            36                             163
  CLUS_4                             9                              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED       14     19     26
  DEL PEAK 48(22Q11.21) WILD-TYPE     75    110     90
D78V11, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                            14                              75
  CLUS_2                            19                             110
  CLUS_3                            26                              90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(22Q11.21) MUTATED        7     33     19
  DEL PEAK 48(22Q11.21) WILD-TYPE     32    118    125
D78V12, multiclass
        clus
vv       DEL PEAK 48(22Q11.21) MUTATED DEL PEAK 48(22Q11.21) WILD-TYPE
  CLUS_1                             7                              32
  CLUS_2                            33                             118
  CLUS_3                            19                             125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 49(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED        8      8      8     17
  DEL PEAK 49(22Q13.32) WILD-TYPE     34     44     24     11
D79V1, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                             8                              44
  CLUS_3                             8                              24
  CLUS_4                            17                              11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       11      9     21
  DEL PEAK 49(22Q13.32) WILD-TYPE     36     47     30
D79V2, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            11                              36
  CLUS_2                             9                              47
  CLUS_3                            21                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       53     35     40
  DEL PEAK 49(22Q13.32) WILD-TYPE    129    131    113
D79V3, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            53                             129
  CLUS_2                            35                             131
  CLUS_3                            40                             113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       47     21     26
  DEL PEAK 49(22Q13.32) WILD-TYPE    105    101     67
D79V4, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            47                             105
  CLUS_2                            21                             101
  CLUS_3                            26                              67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       17     18     11
  DEL PEAK 49(22Q13.32) WILD-TYPE     43     55     50
D79V5, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            17                              43
  CLUS_2                            18                              55
  CLUS_3                            11                              50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED       17      8     14      7
  DEL PEAK 49(22Q13.32) WILD-TYPE     37     33     38     40
D79V6, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            17                              37
  CLUS_2                             8                              33
  CLUS_3                            14                              38
  CLUS_4                             7                              40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED       29     23     59     17
  DEL PEAK 49(22Q13.32) WILD-TYPE     84    129     95     62
D79V7, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            29                              84
  CLUS_2                            23                             129
  CLUS_3                            59                              95
  CLUS_4                            17                              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       39     30     59
  DEL PEAK 49(22Q13.32) WILD-TYPE    139    159     72
D79V8, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            39                             139
  CLUS_2                            30                             159
  CLUS_3                            59                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(22Q13.32) MUTATED       32     40     29     10      7
  DEL PEAK 49(22Q13.32) WILD-TYPE     89     94     92     52     30
D79V9, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            32                              89
  CLUS_2                            40                              94
  CLUS_3                            29                              92
  CLUS_4                            10                              52
  CLUS_5                             7                              30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED       11     38     59     10
  DEL PEAK 49(22Q13.32) WILD-TYPE     78     80    140     59
D79V10, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            11                              78
  CLUS_2                            38                              80
  CLUS_3                            59                             140
  CLUS_4                            10                              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       19     32     33
  DEL PEAK 49(22Q13.32) WILD-TYPE     70     97     83
D79V11, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            19                              70
  CLUS_2                            32                              97
  CLUS_3                            33                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       10     45     29
  DEL PEAK 49(22Q13.32) WILD-TYPE     29    106    115
D79V12, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            10                              29
  CLUS_2                            45                             106
  CLUS_3                            29                             115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 50(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED       10     18      9      8
  DEL PEAK 50(XP22.2) WILD-TYPE     32     34     23     20
D80V1, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           9                            23
  CLUS_4                           8                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       11     19     15
  DEL PEAK 50(XP22.2) WILD-TYPE     36     37     36
D80V2, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          19                            37
  CLUS_3                          15                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       35     69     51
  DEL PEAK 50(XP22.2) WILD-TYPE    147     97    102
D80V3, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          35                           147
  CLUS_2                          69                            97
  CLUS_3                          51                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       26     49     38
  DEL PEAK 50(XP22.2) WILD-TYPE    126     73     55
D80V4, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          26                           126
  CLUS_2                          49                            73
  CLUS_3                          38                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       23     25     16
  DEL PEAK 50(XP22.2) WILD-TYPE     37     48     45
D80V5, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          25                            48
  CLUS_3                          16                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED       19     12     15     18
  DEL PEAK 50(XP22.2) WILD-TYPE     35     29     37     29
D80V6, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          19                            35
  CLUS_2                          12                            29
  CLUS_3                          15                            37
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED       34     60     44     15
  DEL PEAK 50(XP22.2) WILD-TYPE     79     92    110     64
D80V7, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          34                            79
  CLUS_2                          60                            92
  CLUS_3                          44                           110
  CLUS_4                          15                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       49     73     31
  DEL PEAK 50(XP22.2) WILD-TYPE    129    116    100
D80V8, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          49                           129
  CLUS_2                          73                           116
  CLUS_3                          31                           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(XP22.2) MUTATED       37     48     27     23     13
  DEL PEAK 50(XP22.2) WILD-TYPE     84     86     94     39     24
D80V9, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          37                            84
  CLUS_2                          48                            86
  CLUS_3                          27                            94
  CLUS_4                          23                            39
  CLUS_5                          13                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED       35     34     64     15
  DEL PEAK 50(XP22.2) WILD-TYPE     54     84    135     54
D80V10, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          35                            54
  CLUS_2                          34                            84
  CLUS_3                          64                           135
  CLUS_4                          15                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       15     39     50
  DEL PEAK 50(XP22.2) WILD-TYPE     74     90     66
D80V11, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          15                            74
  CLUS_2                          39                            90
  CLUS_3                          50                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED        8     66     30
  DEL PEAK 50(XP22.2) WILD-TYPE     31     85    114
D80V12, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                           8                            31
  CLUS_2                          66                            85
  CLUS_3                          30                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = DEL PEAK 51(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       11     20      8      7
  DEL PEAK 51(XP21.1) WILD-TYPE     31     32     24     21
D81V1, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          11                            31
  CLUS_2                          20                            32
  CLUS_3                           8                            24
  CLUS_4                           7                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       13     20     13
  DEL PEAK 51(XP21.1) WILD-TYPE     34     36     38
D81V2, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          20                            36
  CLUS_3                          13                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       30     73     49
  DEL PEAK 51(XP21.1) WILD-TYPE    152     93    104
D81V3, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          30                           152
  CLUS_2                          73                            93
  CLUS_3                          49                           104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       21     51     38
  DEL PEAK 51(XP21.1) WILD-TYPE    131     71     55
D81V4, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          21                           131
  CLUS_2                          51                            71
  CLUS_3                          38                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       24     23     16
  DEL PEAK 51(XP21.1) WILD-TYPE     36     50     45
D81V5, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          23                            50
  CLUS_3                          16                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       19     13     14     17
  DEL PEAK 51(XP21.1) WILD-TYPE     35     28     38     30
D81V6, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          19                            35
  CLUS_2                          13                            28
  CLUS_3                          14                            38
  CLUS_4                          17                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       35     66     34     15
  DEL PEAK 51(XP21.1) WILD-TYPE     78     86    120     64
D81V7, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          35                            78
  CLUS_2                          66                            86
  CLUS_3                          34                           120
  CLUS_4                          15                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       47     75     28
  DEL PEAK 51(XP21.1) WILD-TYPE    131    114    103
D81V8, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          47                           131
  CLUS_2                          75                           114
  CLUS_3                          28                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(XP21.1) MUTATED       40     48     22     25     12
  DEL PEAK 51(XP21.1) WILD-TYPE     81     86     99     37     25
D81V9, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          40                            81
  CLUS_2                          48                            86
  CLUS_3                          22                            99
  CLUS_4                          25                            37
  CLUS_5                          12                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       38     40     59     10
  DEL PEAK 51(XP21.1) WILD-TYPE     51     78    140     59
D81V10, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          38                            51
  CLUS_2                          40                            78
  CLUS_3                          59                           140
  CLUS_4                          10                            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       10     43     47
  DEL PEAK 51(XP21.1) WILD-TYPE     79     86     69
D81V11, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          10                            79
  CLUS_2                          43                            86
  CLUS_3                          47                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED        6     67     27
  DEL PEAK 51(XP21.1) WILD-TYPE     33     84    117
D81V12, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                           6                            33
  CLUS_2                          67                            84
  CLUS_3                          27                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = DEL PEAK 52(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED        8     20      7     11
  DEL PEAK 52(XP11.3) WILD-TYPE     34     32     25     17
D82V1, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          20                            32
  CLUS_3                           7                            25
  CLUS_4                          11                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       14     20     12
  DEL PEAK 52(XP11.3) WILD-TYPE     33     36     39
D82V2, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          20                            36
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       30     73     46
  DEL PEAK 52(XP11.3) WILD-TYPE    152     93    107
D82V3, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          30                           152
  CLUS_2                          73                            93
  CLUS_3                          46                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       20     53     35
  DEL PEAK 52(XP11.3) WILD-TYPE    132     69     58
D82V4, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          20                           132
  CLUS_2                          53                            69
  CLUS_3                          35                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       24     17     17
  DEL PEAK 52(XP11.3) WILD-TYPE     36     56     44
D82V5, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          17                            56
  CLUS_3                          17                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       21     11      9     17
  DEL PEAK 52(XP11.3) WILD-TYPE     33     30     43     30
D82V6, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          21                            33
  CLUS_2                          11                            30
  CLUS_3                           9                            43
  CLUS_4                          17                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       31     65     39     13
  DEL PEAK 52(XP11.3) WILD-TYPE     82     87    115     66
D82V7, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          31                            82
  CLUS_2                          65                            87
  CLUS_3                          39                           115
  CLUS_4                          13                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       47     73     28
  DEL PEAK 52(XP11.3) WILD-TYPE    131    116    103
D82V8, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          47                           131
  CLUS_2                          73                           116
  CLUS_3                          28                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP11.3) MUTATED       36     50     18     26     13
  DEL PEAK 52(XP11.3) WILD-TYPE     85     84    103     36     24
D82V9, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          36                            85
  CLUS_2                          50                            84
  CLUS_3                          18                           103
  CLUS_4                          26                            36
  CLUS_5                          13                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       38     38     58      9
  DEL PEAK 52(XP11.3) WILD-TYPE     51     80    141     60
D82V10, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          38                            51
  CLUS_2                          38                            80
  CLUS_3                          58                           141
  CLUS_4                           9                            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       10     40     47
  DEL PEAK 52(XP11.3) WILD-TYPE     79     89     69
D82V11, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          10                            79
  CLUS_2                          40                            89
  CLUS_3                          47                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED        7     64     26
  DEL PEAK 52(XP11.3) WILD-TYPE     32     87    118
D82V12, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                           7                            32
  CLUS_2                          64                            87
  CLUS_3                          26                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = DEL PEAK 53(XQ22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ22.3) MUTATED       15      7      5     10
  DEL PEAK 53(XQ22.3) WILD-TYPE     27     45     27     18
D83V1, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                           7                            45
  CLUS_3                           5                            27
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       18      7     12
  DEL PEAK 53(XQ22.3) WILD-TYPE     29     49     39
D83V2, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          18                            29
  CLUS_2                           7                            49
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       19     37     58
  DEL PEAK 53(XQ22.3) WILD-TYPE    163    129     95
D83V3, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          19                           163
  CLUS_2                          37                           129
  CLUS_3                          58                            95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       14     30     35
  DEL PEAK 53(XQ22.3) WILD-TYPE    138     92     58
D83V4, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          14                           138
  CLUS_2                          30                            92
  CLUS_3                          35                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       15     17     13
  DEL PEAK 53(XQ22.3) WILD-TYPE     45     56     48
D83V5, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          15                            45
  CLUS_2                          17                            56
  CLUS_3                          13                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ22.3) MUTATED       13     10     10     12
  DEL PEAK 53(XQ22.3) WILD-TYPE     41     31     42     35
D83V6, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          13                            41
  CLUS_2                          10                            31
  CLUS_3                          10                            42
  CLUS_4                          12                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ22.3) MUTATED       36     31     39      7
  DEL PEAK 53(XQ22.3) WILD-TYPE     77    121    115     72
D83V7, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          36                            77
  CLUS_2                          31                           121
  CLUS_3                          39                           115
  CLUS_4                           7                            72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       47     38     28
  DEL PEAK 53(XQ22.3) WILD-TYPE    131    151    103
D83V8, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          47                           131
  CLUS_2                          38                           151
  CLUS_3                          28                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XQ22.3) MUTATED       32     39     15     12     12
  DEL PEAK 53(XQ22.3) WILD-TYPE     89     95    106     50     25
D83V9, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          32                            89
  CLUS_2                          39                            95
  CLUS_3                          15                           106
  CLUS_4                          12                            50
  CLUS_5                          12                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ22.3) MUTATED       20     33     54      3
  DEL PEAK 53(XQ22.3) WILD-TYPE     69     85    145     66
D83V10, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          20                            69
  CLUS_2                          33                            85
  CLUS_3                          54                           145
  CLUS_4                           3                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       11     27     35
  DEL PEAK 53(XQ22.3) WILD-TYPE     78    102     81
D83V11, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          11                            78
  CLUS_2                          27                           102
  CLUS_3                          35                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ22.3) MUTATED       10     46     17
  DEL PEAK 53(XQ22.3) WILD-TYPE     29    105    127
D83V12, multiclass
        clus
vv       DEL PEAK 53(XQ22.3) MUTATED DEL PEAK 53(XQ22.3) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                          46                           105
  CLUS_3                          17                           127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
