gene1	gene2	pval	qval
SPOP	Del_17p13.1	0.000223	1
SPOP	Del_17q21.31	0.00513	1
Amp_7q22.1	Del_10q23.31	0.00717	1
Del_4q28.2	Del_21q22.3	0.00763	1
8p-Amp	Del_21q22.3	0.00993	1
Del_3p13	Del_5q21.1	0.012	1
SPOP	Del_10q23.31	0.0133	1
FOXA1	Del_21q22.3	0.0169	1
Del_5q21.1	Del_21q22.3	0.0226	1
8p-Amp	8p-Del	0.024	1
SPOP	Del_3p13	0.0287	1
Del_3p13	Del_5q13.2	0.032	1
FOXA1	Del_18q23	0.0356	1
SPOP	TP53	0.0357	1
ZFHX3	Del_21q22.3	0.0366	1
Amp_8q24.21	Del_1p31.3	0.0369	1
FOXA1	Del_10q23.31	0.04	1
SPOP	Del_8p23.2	0.0413	1
Del_2q22.1	Del_3p13	0.0438	1
SPOP	Del_18q23	0.0494	1
Amp_7p14.3	Del_3p13	0.0538	1
7q-Amp	Del_10q23.31	0.0575	1
FAM47C	Del_8p23.2	0.0594	1
FOXA1	Del_3p13	0.0607	1
Del_2q22.1	Del_21q22.3	0.0623	1
Del_5q21.1	Del_17q21.31	0.0625	1
Amp_11q13.2	Del_17p13.1	0.0637	1
EPB41L3	Del_16q24.1	0.0679	1
FOXA1	Del_17q21.31	0.0692	1
8q-Amp	Del_21q22.3	0.0727	1
Amp_11q13.2	Del_10q23.31	0.0791	1
SPOP	18p-Del	0.0821	1
18p-Del	Del_3p13	0.087	1
Del_2q22.3	Del_3p13	0.0888	1
RAG1	Del_16q24.1	0.0891	1
FAM47C	Del_16q24.1	0.0891	1
SPOP	18q-Del	0.0909	1
SPOP	Del_21q22.2	0.0928	1
8q-Amp	8p-Del	0.0946	1
SALL1	Del_6q14.3	0.097	1
Amp_3q26.2	Del_17q21.31	0.0976	1
Amp_8p11.23	Del_17q21.31	0.0976	1
Del_6q14.3	Del_21q22.3	0.0995	1
7p-Amp	Del_10q23.31	0.101	1
FOXA1	Del_17p13.1	0.102	1
KDM6A	Del_21q22.3	0.103	1
IDH1	Del_8p21.3	0.104	1
FAM47C	Del_8p21.3	0.105	1
TP53	Del_1p22.1	0.109	1
TP53BP1	Del_8p23.2	0.112	1
SPOP	Del_16q24.1	0.113	1
SPOP	8p-Del	0.115	1
Amp_Xq27.1	Del_16q24.1	0.117	1
SPOP	Del_19q13.2	0.118	1
Amp_3q21.3	Del_17q21.31	0.122	1
Del_4q28.2	Del_17q21.31	0.122	1
FOXA1	18q-Del	0.124	1
RAG1	Del_16q22.3	0.124	1
FAM47C	Del_16q22.3	0.124	1
8p-Amp	Del_3p13	0.124	1
FAM47C	Del_17p13.1	0.128	1
BRAF	Del_21q22.3	0.132	1
Amp_Xq27.1	Del_21q22.3	0.132	1
TP53	Del_3p13	0.133	1
8p-Amp	Del_17q21.31	0.137	1
12p-Del	Del_2q22.1	0.144	1
Del_2q22.1	Del_15q21.3	0.144	1
FOXA1	8p-Del	0.149	1
KDM6A	Del_10q23.31	0.15	1
LILRB5	Del_10q23.31	0.15	1
ZFHX3	Del_16q24.1	0.152	1
Amp_Xq27.1	Del_16q22.3	0.157	1
KDM6A	8p-Del	0.158	1
RAG1	8p-Del	0.158	1
FAM47C	8p-Del	0.158	1
8p-Del	Amp_14q21.1	0.158	1
Amp_8q22.1	Del_21q22.3	0.158	1
FOXA1	Del_18q21.31	0.159	1
NTM	Del_13q14.13	0.166	1
CNTNAP1	Del_13q14.13	0.166	1
Del_2q22.1	Del_17q21.31	0.167	1
ATM	Del_21q22.3	0.168	1
Del_2q22.3	Del_21q22.3	0.17	1
L1CAM	Del_21q22.3	0.171	1
TP53BP1	Del_21q22.3	0.171	1
8q-Amp	Del_10q23.31	0.177	1
Del_3p13	Del_12q24.32	0.177	1
Amp_12q23.1	Del_10q23.31	0.186	1
18q-Del	Del_4q28.2	0.194	1
Del_6q14.3	Del_17q21.31	0.198	1
PTEN	Del_5q13.2	0.199	1
TNRC18	Del_16q24.1	0.201	1
12p-Del	Del_2q22.3	0.202	1
Del_2q22.3	Del_15q21.3	0.202	1
MED12	Del_17p13.1	0.203	1
TP53BP1	Del_17p13.1	0.203	1
GRIA1	Del_8p23.2	0.205	1
7p-Amp	Del_1q42.3	0.206	1
7p-Amp	Del_3p13	0.207	1
Amp_8p11.23	Del_10q23.31	0.208	1
IDH1	Del_8p23.2	0.21	1
Amp_7q22.1	Del_21q22.3	0.21	1
7p-Amp	Del_12p13.1	0.211	1
BMP2K	Del_6q14.3	0.212	1
8q-Del	Del_6q14.3	0.212	1
Del_2q22.1	Del_17p13.1	0.212	1
ZFHX3	Del_16q22.3	0.217	1
Amp_8q24.21	Del_1p22.1	0.217	1
Amp_8q24.21	Del_21q22.2	0.217	1
BRAF	Del_13q22.1	0.219	1
Amp_Xq27.1	Del_13q22.1	0.219	1
CNTNAP1	Del_21q22.3	0.22	1
RPTN	Del_21q22.3	0.22	1
3p-Amp	Del_21q22.3	0.22	1
Xp-Del	Del_21q22.3	0.22	1
Xq-Del	Del_21q22.3	0.22	1
Amp_7p14.3	Del_1q42.3	0.22	1
Amp_15q11.2	Del_21q22.3	0.22	1
Amp_20q13.2	Del_21q22.3	0.22	1
KDM6A	Del_12p13.1	0.222	1
FAM47C	Del_12p13.1	0.222	1
PTEN	Del_2q22.1	0.223	1
Del_4q28.2	Del_17p13.1	0.223	1
KIRREL	Del_13q14.13	0.224	1
ZFHX3	Del_3p13	0.224	1
MUC17	Del_5q13.2	0.226	1
Amp_8q22.1	Del_21q22.2	0.226	1
GRIA1	Amp_8q24.21	0.229	1
TP53	7p-Amp	0.23	1
SPOP	Del_16q22.3	0.233	1
SPOP	17p-Del	0.235	1
Amp_7p14.3	Del_12p13.1	0.235	1
TP53BP1	8p-Del	0.24	1
EPB41L3	Del_18q21.31	0.249	1
GRIA1	Del_5q21.1	0.249	1
Amp_7q22.1	Del_1q42.3	0.249	1
TP53	Amp_7p14.3	0.25	1
Amp_7p14.3	Del_17q21.31	0.25	1
BMP2K	Del_16q22.3	0.251	1
TNRC18	Del_16q22.3	0.251	1
Amp_11q13.2	Del_3p13	0.252	1
7p-Amp	18p-Del	0.253	1
EPB41L3	Del_18q23	0.255	1
OR4D5	Del_17p13.1	0.255	1
BMP2K	Del_17p13.1	0.255	1
RPTN	Del_17p13.1	0.255	1
KIDINS220	Del_8p21.3	0.259	1
RAG1	Del_8p23.2	0.259	1
SALL1	Del_8p23.2	0.259	1
ZMYM3	Del_8p23.2	0.259	1
EDC4	Del_8p21.3	0.259	1
GAGE2D	Del_8p21.3	0.259	1
POM121	Del_8p21.3	0.259	1
3q-Amp	Del_21q22.3	0.259	1
EPB41L3	Del_5q11.2	0.263	1
IDH1	Del_16q24.1	0.263	1
KIRREL	Del_16q24.1	0.263	1
Amp_Xq21.1	Del_16q24.1	0.263	1
Amp_Xq27.1	Del_12p13.1	0.263	1
SPOP	Del_18q21.31	0.264	1
FOXA1	Del_1p31.3	0.265	1
FOXA1	Del_11q23.2	0.265	1
MED12	Del_13q22.1	0.265	1
FAM47C	Amp_8q24.21	0.265	1
L1CAM	Del_13q22.1	0.265	1
7q-Amp	Del_1q42.3	0.265	1
MUC17	Amp_8p11.23	0.267	1
TP53	Amp_11q13.2	0.269	1
Amp_7q22.1	Del_3p13	0.269	1
Amp_11q13.2	Del_17q21.31	0.269	1
FOXA1	TP53	0.271	1
ATM	Del_10q23.31	0.272	1
FAM47C	Amp_8q22.1	0.272	1
Del_4q28.2	Del_10q23.31	0.272	1
Del_10q23.31	Del_11q22.3	0.272	1
Amp_7p14.3	Del_10q23.31	0.274	1
ZNF709	Del_6q14.3	0.276	1
Amp_Xq21.1	Del_6q14.3	0.276	1
Amp_8p11.23	Del_21q22.3	0.278	1
7p-Amp	Del_21q22.3	0.279	1
SPOP	Del_1p31.3	0.281	1
SPOP	Del_11q23.2	0.281	1
FAM47C	Del_13q14.13	0.281	1
FOXA1	18p-Del	0.282	1
Del_4q28.2	Del_18q23	0.282	1
COL11A1	Del_3p13	0.283	1
COL11A1	Del_5q13.2	0.283	1
HRAS	Del_21q22.3	0.284	1
IDH1	Del_21q22.3	0.284	1
OR4D5	Del_10q23.31	0.284	1
OR4P4	Del_21q22.3	0.284	1
CNTNAP1	Del_10q23.31	0.284	1
MED15	Del_10q23.31	0.284	1
ZNF709	Del_21q22.3	0.284	1
3p-Amp	Del_10q23.31	0.284	1
17p-Del	Del_2q22.1	0.284	1
Xp-Del	Del_10q23.31	0.284	1
Xq-Del	Del_10q23.31	0.284	1
Amp_17q23.2	Del_21q22.3	0.284	1
Amp_7p14.3	Del_1p22.1	0.285	1
ZMYM3	Del_5q21.1	0.286	1
ZMYM3	Del_18q21.31	0.286	1
EMG1	Del_8p23.2	0.288	1
LCE2D	Del_8p23.2	0.288	1
TCERG1	Del_8p23.2	0.288	1
PTEN	Del_2q22.3	0.29	1
ZMYM3	Del_18q23	0.293	1
7q-Amp	Del_3p13	0.293	1
13q-Del	Del_3p13	0.293	1
NTM	8p-Del	0.294	1
OR4D5	8p-Del	0.294	1
RPTN	Del_8p21.3	0.295	1
18p-Del	Amp_7q22.1	0.297	1
EPB41L3	Del_6q14.3	0.299	1
COL11A1	Del_17q21.31	0.3	1
FOXA1	Del_1p22.1	0.3	1
FOXA1	Del_21q22.2	0.3	1
TP53	3q-Amp	0.3	1
3q-Amp	Del_17q21.31	0.3	1
SALL1	Del_5q11.2	0.301	1
ZMYM3	Del_5q11.2	0.301	1
FAM47C	Del_5q11.2	0.301	1
Del_5q21.1	Del_15q21.3	0.301	1
MLLT10	Del_13q14.13	0.303	1
TCEB3	Del_13q14.13	0.303	1
TCERG1	Del_13q14.13	0.303	1
SALL1	Del_8p21.3	0.308	1
Amp_14q21.1	Del_8p21.3	0.308	1
GRIA1	SPOP	0.309	1
7p-Amp	12p-Del	0.309	1
7p-Amp	Del_15q21.3	0.309	1
8p-Amp	Del_10q23.31	0.309	1
Del_5q21.1	Del_17p13.1	0.309	1
ANO4	Del_12p13.1	0.311	1
L1CAM	Del_12p13.1	0.311	1
Amp_4q13.3	Del_12p13.1	0.311	1
Amp_1q22	Del_17p13.1	0.312	1
7q-Amp	18p-Del	0.314	1
Amp_8p11.23	Del_1p31.3	0.314	1
IDH1	Del_16q22.3	0.316	1
EHHADH	Del_16q22.3	0.316	1
KIRREL	Del_16q22.3	0.316	1
Amp_Xq21.1	Del_16q22.3	0.316	1
Amp_Xq25	Del_16q22.3	0.316	1
SPOP	8q-Amp	0.317	1
Del_3p13	Del_5q11.2	0.317	1
EPB41L3	Del_3p13	0.318	1
EPB41L3	Del_5q13.2	0.318	1
GRIA1	Del_5q13.2	0.318	1
TP53	7q-Amp	0.318	1
TP53	Del_11q23.2	0.318	1
Del_11q23.2	Del_17q21.31	0.318	1
Amp_3q21.3	Del_1q42.3	0.319	1
Amp_8p11.23	Del_3p13	0.319	1
IDH1	Del_17p13.1	0.321	1
NTM	Del_13q22.1	0.321	1
OR4D5	Del_13q22.1	0.321	1
CDKN1B	Del_17p13.1	0.321	1
CNTNAP1	Del_13q22.1	0.321	1
ZNF709	Del_17p13.1	0.321	1
1q-Amp	Del_17p13.1	0.321	1
MUC17	Del_15q21.3	0.324	1
12p-Del	Amp_7p14.3	0.324	1
Amp_Xp22.11	Del_5q21.1	0.329	1
GRIA1	TP53	0.335	1
FOXA1	12p-Del	0.339	1
FOXA1	Del_19q13.2	0.339	1
BRAF	Del_5q11.2	0.344	1
EPB41L3	Del_2q22.1	0.344	1
GRIA1	Del_2q22.1	0.344	1
LCE2D	Del_16q24.1	0.344	1
NKX3-1	Del_16q24.1	0.344	1
RPL11	Del_16q24.1	0.344	1
TP53	Amp_3q26.2	0.344	1
ESCO1	Del_16q24.1	0.344	1
TCERG1	Del_16q24.1	0.344	1
8q-Amp	Del_1p31.3	0.345	1
BRAF	Del_13q14.13	0.347	1
SALL1	SPOP	0.348	1
SPOP	ZMYM3	0.348	1
Amp_3q26.2	Del_1p22.1	0.35	1
Amp_3q26.2	Del_21q22.2	0.35	1
Amp_8p11.23	Del_1p22.1	0.35	1
Amp_8p11.23	Del_21q22.2	0.35	1
EHHADH	Del_10q23.31	0.351	1
MUC17	Del_18q21.31	0.352	1
Amp_3q26.2	Del_12p13.1	0.353	1
COL11A1	Del_10q23.31	0.355	1
CTNNB1	Del_10q23.31	0.355	1
Amp_1q22	Del_10q23.31	0.355	1
Amp_7q22.1	Del_15q21.3	0.355	1
APC	Del_3p13	0.357	1
KDM6A	Del_3p13	0.357	1
LILRB5	Del_3p13	0.357	1
RAG1	Del_3p13	0.357	1
SALL1	Del_5q13.2	0.357	1
ZMYM3	Del_5q13.2	0.357	1
ESCO1	Del_6q14.3	0.357	1
FAM47C	Del_5q13.2	0.357	1
Amp_14q21.1	Del_3p13	0.357	1
Amp_8q24.21	Del_21q22.3	0.358	1
EPB41L3	Del_16q22.3	0.359	1
RAG1	Del_6q14.3	0.359	1
SPOP	Del_8p21.3	0.359	1
ZMYM3	Del_6q14.3	0.359	1
FAM47C	Del_6q14.3	0.359	1
IDH1	8p-Del	0.361	1
LMOD2	8p-Del	0.361	1
CR1L	8p-Del	0.361	1
Amp_3q21.3	Del_21q22.3	0.361	1
TP53BP1	Amp_8q22.1	0.364	1
EPB41L3	Del_17p13.1	0.366	1
CNTNAP1	Del_12p13.1	0.368	1
MED15	Del_12p13.1	0.368	1
RPTN	Del_12p13.1	0.368	1
3p-Amp	Del_12p13.1	0.368	1
Amp_15q11.2	Del_12p13.1	0.368	1
Amp_20q13.2	Del_12p13.1	0.368	1
ATM	18p-Del	0.369	1
18p-Del	Amp_3q21.3	0.369	1
18p-Del	Del_4q28.2	0.369	1
LILRB5	Del_21q22.3	0.372	1
7q-Amp	Del_15q21.3	0.372	1
12p-Del	Del_11q23.2	0.372	1
13q-Del	Del_15q21.3	0.372	1
Amp_14q21.1	Del_21q22.3	0.372	1
Amp_16q11.2	Del_21q22.3	0.372	1
Del_1p22.1	Del_17q21.31	0.372	1
Del_11q23.2	Del_19q13.2	0.372	1
8q-Amp	Del_17q21.31	0.373	1
ATM	Del_3p13	0.375	1
KDM6A	Del_17q21.31	0.375	1
LILRB5	Del_17q21.31	0.375	1
TP53	ZMYM3	0.375	1
TP53	FAM47C	0.375	1
Amp_14q21.1	Del_17q21.31	0.375	1
Del_3p13	Del_4q28.2	0.375	1
MED12	Del_5q21.1	0.379	1
MED12	Del_18q21.31	0.379	1
LAMA3	Del_5q21.1	0.379	1
TP53BP1	Del_18q21.31	0.379	1
Amp_Xp21.1	Del_5q21.1	0.379	1
MUC17	18q-Del	0.38	1
MUC17	Del_5q11.2	0.38	1
Del_1q42.3	Del_11p11.2	0.383	1
RAG1	Del_2q22.1	0.384	1
ZMYM3	Del_2q22.1	0.384	1
Amp_14q21.1	Del_2q22.1	0.384	1
Del_2q22.1	Del_21q22.2	0.385	1
MED12	Del_18q23	0.386	1
TP53BP1	Del_18q23	0.386	1
ATM	Del_1p22.1	0.388	1
ATM	Del_21q22.2	0.388	1
Amp_3q21.3	Del_1p22.1	0.388	1
Amp_3q21.3	Del_21q22.2	0.388	1
Del_4q28.2	Del_21q22.2	0.388	1
HRAS	Del_13q22.1	0.389	1
OR4P4	Del_13q22.1	0.389	1
KIRREL	Del_13q22.1	0.389	1
22q-Del	Del_13q22.1	0.389	1
Amp_3q26.2	Del_15q21.3	0.389	1
Amp_8p11.23	Del_19q13.2	0.389	1
Amp_Xq25	Del_13q22.1	0.389	1
Del_6q14.3	Del_19q13.2	0.389	1
COL11A1	18q-Del	0.39	1
MUC17	Del_16q22.3	0.392	1
SPOP	Amp_Xp22.11	0.392	1
SPOP	Amp_Xq27.1	0.392	1
APC	8q-Amp	0.393	1
EPB41L3	16q-Del	0.393	1
KIDINS220	Del_8p23.2	0.393	1
SPOP	12p-Del	0.393	1
SPOP	Del_15q21.3	0.393	1
ZMYM3	8q-Amp	0.393	1
EDC4	Del_8p23.2	0.393	1
FAM47C	8q-Amp	0.393	1
GAGE2D	Del_8p23.2	0.393	1
POM121	Del_8p23.2	0.393	1
MED12	Del_5q11.2	0.394	1
LCE2D	Del_16q22.3	0.398	1
NKX3-1	Del_16q22.3	0.398	1
RPL11	Del_16q22.3	0.398	1
ESCO1	Del_16q22.3	0.398	1
MLLT10	Del_16q22.3	0.398	1
TCERG1	Del_16q22.3	0.398	1
8q-Amp	Del_21q22.2	0.399	1
BRAF	Del_3p13	0.401	1
BRAF	Del_5q13.2	0.401	1
TP53	Amp_3q21.3	0.401	1
TP53	Del_4q28.2	0.401	1
TP53	Del_11q22.3	0.401	1
9q-Amp	Del_3p13	0.401	1
Amp_Xp22.11	Del_5q13.2	0.401	1
Amp_Xq27.1	Del_3p13	0.401	1
PTEN	7p-Amp	0.403	1
RPL11	Del_17p13.1	0.403	1
SPOP	16q-Del	0.403	1
ESCO1	Del_17p13.1	0.403	1
ZNF709	Del_8p21.3	0.405	1
Amp_8q24.21	Del_3p13	0.406	1
BRAF	Del_16q24.1	0.408	1
8p-Amp	Del_21q22.2	0.408	1
12p-Del	Del_1p22.1	0.408	1
GAGE2D	Del_13q14.13	0.409	1
POM121	Del_13q14.13	0.409	1
EPB41L3	Del_10q23.31	0.41	1
NTM	Amp_8q24.21	0.414	1
BMP2K	Amp_8q24.21	0.414	1
MED15	Amp_8q24.21	0.414	1
10q-Del	Amp_8q24.21	0.414	1
8q-Del	Amp_8q24.21	0.414	1
EPB41L3	Del_2q22.3	0.415	1
BRAF	Del_17q21.31	0.418	1
PTEN	Amp_7p14.3	0.418	1
TP53	Amp_Xq27.1	0.418	1
Amp_12q23.1	Del_17q21.31	0.418	1
Amp_Xq27.1	Del_17q21.31	0.418	1
SALL1	Del_16q22.3	0.42	1
Amp_14q21.1	Del_16q22.3	0.42	1
NTM	Amp_8q22.1	0.421	1
BMP2K	Amp_8q22.1	0.421	1
MED15	Amp_8q22.1	0.421	1
10q-Del	Amp_8q22.1	0.421	1
8q-Del	Amp_8q22.1	0.421	1
EPB41L3	18q-Del	0.426	1
EPB41L3	8p-Del	0.426	1
MED12	Del_13q14.13	0.426	1
L1CAM	Del_13q14.13	0.426	1
TP53BP1	Del_13q14.13	0.426	1
Amp_8q22.1	Del_3p13	0.426	1
ATM	Del_15q21.3	0.427	1
LILRB5	Del_17p13.1	0.427	1
12p-Del	Del_4q28.2	0.427	1
12p-Del	Del_11q22.3	0.427	1
Amp_3q21.3	Del_15q21.3	0.427	1
Amp_Xp22.11	Del_2q22.1	0.427	1
Amp_Xq27.1	Del_2q22.1	0.427	1
Amp_Xq27.1	Del_6q14.3	0.427	1
Del_4q28.2	Del_9p23	0.427	1
Del_4q28.2	Del_19q13.2	0.427	1
ZFHX3	7p-Amp	0.43	1
Amp_11q13.2	Del_12p13.1	0.431	1
RAG1	16q-Del	0.432	1
SALL1	16q-Del	0.432	1
FAM47C	16q-Del	0.432	1
16q-Del	Amp_14q21.1	0.432	1
ESCO1	Del_10q23.31	0.433	1
HRAS	Del_12p13.1	0.436	1
IDH1	Del_12p13.1	0.436	1
LMOD2	Del_12p13.1	0.436	1
OR4D5	Del_5q21.1	0.436	1
OR4D5	Del_18q21.31	0.436	1
BMP2K	Del_5q21.1	0.436	1
BMP2K	Del_18q21.31	0.436	1
CNTNAP1	Del_18q21.31	0.436	1
RPTN	Del_18q21.31	0.436	1
ZNF709	Del_12p13.1	0.436	1
3p-Amp	Del_18q21.31	0.436	1
8q-Amp	Amp_Xq27.1	0.436	1
10q-Del	Del_5q21.1	0.436	1
8q-Del	Del_5q21.1	0.436	1
Amp_13q12.11	Del_18q21.31	0.436	1
Amp_15q11.2	Del_5q21.1	0.436	1
Amp_15q11.2	Del_18q21.31	0.436	1
Amp_17q23.2	Del_12p13.1	0.436	1
7q-Amp	Del_21q22.3	0.44	1
Amp_12q23.1	Del_21q22.3	0.44	1
Amp_Xp22.11	Del_21q22.3	0.44	1
ANO4	SPOP	0.441	1
ATM	Del_17p13.1	0.441	1
MED12	SPOP	0.441	1
SPOP	Amp_4q13.3	0.441	1
SPOP	Amp_Xp21.1	0.441	1
Del_10q23.31	Del_12q24.32	0.441	1
EMG1	8p-Del	0.443	1
LCE2D	8p-Del	0.443	1
OR4D5	Del_18q23	0.443	1
RPL11	8p-Del	0.443	1
BMP2K	Del_18q23	0.443	1
CNTNAP1	Del_18q23	0.443	1
MLLT10	8p-Del	0.443	1
RPTN	Del_18q23	0.443	1
TCERG1	8p-Del	0.443	1
3p-Amp	Del_18q23	0.443	1
Xp-Del	Del_18q23	0.443	1
Xq-Del	Del_18q23	0.443	1
Amp_15q11.2	Del_18q23	0.443	1
Del_1p31.3	Del_5q21.1	0.444	1
ZFHX3	Amp_7p14.3	0.445	1
Del_2q22.1	Del_19q13.2	0.445	1
12p-Del	Del_15q21.3	0.447	1
Del_9p23	Del_19q13.2	0.447	1
Del_15q21.3	Del_19q13.2	0.447	1
PTEN	Amp_7q22.1	0.449	1
ANO4	Del_3p13	0.45	1
KIDINS220	Del_16q24.1	0.45	1
MED12	Del_5q13.2	0.45	1
OR4D5	Del_5q11.2	0.45	1
BMP2K	Del_5q11.2	0.45	1
GAGE2D	Del_16q24.1	0.45	1
L1CAM	Del_3p13	0.45	1
MED15	Del_5q11.2	0.45	1
POM121	Del_16q24.1	0.45	1
RPTN	Del_5q11.2	0.45	1
SMG7	Del_3p13	0.45	1
10q-Del	Del_5q11.2	0.45	1
8q-Del	Del_5q11.2	0.45	1
Amp_15q11.2	Del_5q11.2	0.45	1
Amp_Xp21.1	Del_5q13.2	0.45	1
RAG1	Del_2q22.3	0.453	1
SALL1	Del_2q22.3	0.453	1
ZMYM3	Del_2q22.3	0.453	1
ZFHX3	Amp_8q24.21	0.453	1
Amp_16q11.2	Del_2q22.3	0.453	1
Amp_8q24.21	Del_17q21.31	0.456	1
ZFHX3	Del_1q42.3	0.46	1
KIDINS220	Del_6q14.3	0.462	1
FAM120B	Del_6q14.3	0.462	1
GAGE2D	Del_6q14.3	0.462	1
POM121	Del_6q14.3	0.462	1
Amp_3q26.2	Del_2q22.3	0.462	1
APC	18q-Del	0.464	1
SALL1	18q-Del	0.464	1
ZMYM3	18q-Del	0.464	1
FAM47C	18q-Del	0.464	1
ZFHX3	Amp_8q22.1	0.464	1
PTEN	7q-Amp	0.465	1
PTEN	Del_5q11.2	0.465	1
8p-Amp	Del_12p13.1	0.465	1
Del_12p13.1	Del_19q13.2	0.465	1
ANO4	TP53	0.467	1
ANO4	Del_17q21.31	0.467	1
MED12	TP53	0.467	1
MED12	Del_17q21.31	0.467	1
TP53	L1CAM	0.467	1
TP53	TP53BP1	0.467	1
TP53	Amp_Xp21.1	0.467	1
L1CAM	Del_17q21.31	0.467	1
TP53BP1	Del_17q21.31	0.467	1
Amp_4q13.3	Del_17q21.31	0.467	1
MLLT10	Del_13q22.1	0.47	1
TCEB3	Del_13q22.1	0.47	1
TCERG1	Del_13q22.1	0.47	1
APC	Del_10q23.31	0.471	1
BHLHE22	Del_21q22.3	0.471	1
SALL1	Del_10q23.31	0.471	1
ERN1	Del_21q22.3	0.471	1
FAM120B	Del_21q22.3	0.471	1
GAGE2D	Del_21q22.3	0.471	1
MYOT	Del_21q22.3	0.471	1
POM121	Del_21q22.3	0.471	1
Amp_16q11.2	Del_10q23.31	0.471	1
BRAF	16q-Del	0.475	1
EPB41L3	Del_8p23.2	0.475	1
16q-Del	Amp_Xq27.1	0.475	1
Del_12q24.32	Del_21q22.2	0.475	1
ANO4	Del_2q22.1	0.476	1
L1CAM	Del_2q22.1	0.476	1
Amp_Xp21.1	Del_2q22.1	0.476	1
TP53	Del_6q14.3	0.477	1
18p-Del	Del_5q21.1	0.478	1
Del_3p13	Del_13q22.1	0.479	1
HRAS	Amp_8q24.21	0.48	1
IDH1	Amp_8q24.21	0.48	1
OR4P4	Amp_8q24.21	0.48	1
CDKN1B	Amp_8q24.21	0.48	1
EHHADH	Amp_8q24.21	0.48	1
10p-Del	Amp_8q24.21	0.48	1
Amp_8q24.21	Amp_Xq21.1	0.48	1
EPB41L3	Del_8p21.3	0.481	1
GRIA1	Del_8p21.3	0.481	1
3q-Amp	Del_12p13.1	0.481	1
Amp_1q22	Del_12p13.1	0.481	1
PTEN	Amp_3q26.2	0.482	1
Amp_11q13.2	Del_21q22.3	0.482	1
ANO4	8q-Amp	0.485	1
L1CAM	8q-Amp	0.485	1
ZFHX3	Del_18q21.31	0.485	1
8q-Amp	Amp_Xp21.1	0.485	1
LILRB5	8p-Del	0.486	1
SALL1	8p-Del	0.486	1
ZMYM3	8p-Del	0.486	1
TP53BP1	Del_16q24.1	0.486	1
Amp_3q26.2	Del_21q22.3	0.486	1
HRAS	Amp_8q22.1	0.487	1
IDH1	Amp_8q22.1	0.487	1
LMOD2	Amp_8q22.1	0.487	1
OR4P4	Amp_8q22.1	0.487	1
CDKN1B	Amp_8q22.1	0.487	1
EHHADH	Amp_8q22.1	0.487	1
KIRREL	Amp_8q22.1	0.487	1
1q-Amp	Amp_8q22.1	0.487	1
10p-Del	Amp_8q22.1	0.487	1
Amp_8q22.1	Amp_Xq21.1	0.487	1
BRAF	Del_16q22.3	0.488	1
FOXA1	Del_12p13.1	0.488	1
7p-Amp	Del_17q21.31	0.489	1
17p-Del	Amp_11q13.2	0.489	1
Amp_11q13.2	Del_1q42.3	0.489	1
Del_11p11.2	Del_19q13.2	0.49	1
ZFHX3	Del_17p13.1	0.491	1
ZFHX3	7q-Amp	0.492	1
ZFHX3	Del_1p31.3	0.492	1
NTM	Del_8p23.2	0.494	1
OR4D5	Del_8p23.2	0.494	1
CNTNAP1	Del_8p23.2	0.494	1
MED15	Del_8p23.2	0.494	1
RPTN	Del_8p23.2	0.494	1
BRAF	Del_2q22.3	0.495	1
BRAF	Del_17p13.1	0.495	1
ZFHX3	Del_18q23	0.495	1
Amp_12q23.1	Del_17p13.1	0.495	1
Amp_Xp22.11	Del_2q22.3	0.495	1
Amp_Xq27.1	Del_2q22.3	0.495	1
Amp_Xq27.1	Del_17p13.1	0.495	1
SPOP	10q-Del	0.496	1
SPOP	8q-Del	0.496	1
SPOP	Amp_9q33.3	0.496	1
SPOP	Amp_13q12.11	0.496	1
SPOP	Amp_15q11.2	0.496	1
PTEN	Del_1p22.1	0.5	1
PTEN	Del_21q22.2	0.5	1
Del_5q13.2	Del_17q21.31	0.5	1
HRAS	Del_5q21.1	0.501	1
IDH1	Del_5q21.1	0.501	1
LMOD2	Del_5q21.1	0.501	1
LMOD2	Del_18q21.31	0.501	1
CDKN1B	Del_5q21.1	0.501	1
CDKN1B	Del_18q21.31	0.501	1
KIRREL	Del_18q21.31	0.501	1
ZNF709	Del_5q21.1	0.501	1
ZNF709	Del_18q21.31	0.501	1
10p-Del	Del_18q21.31	0.501	1
Amp_Xq21.1	Del_5q21.1	0.501	1
KIDINS220	Del_16q22.3	0.502	1
EDC4	Del_16q22.3	0.502	1
FAM120B	Del_16q22.3	0.502	1
GAGE2D	Del_16q22.3	0.502	1
POM121	Del_16q22.3	0.502	1
EPB41L3	Del_13q14.13	0.503	1
NTM	Del_5q13.2	0.504	1
OR4D5	Del_5q13.2	0.504	1
BMP2K	Del_5q13.2	0.504	1
CNTNAP1	Del_3p13	0.504	1
RPTN	Del_5q13.2	0.504	1
TNRC18	Del_5q13.2	0.504	1
3p-Amp	Del_3p13	0.504	1
10q-Del	Del_5q13.2	0.504	1
Xp-Del	Del_3p13	0.504	1
Xq-Del	Del_3p13	0.504	1
Amp_13q12.11	Del_3p13	0.504	1
Amp_15q11.2	Del_3p13	0.504	1
Amp_15q11.2	Del_5q13.2	0.504	1
Amp_20q13.2	Del_3p13	0.504	1
CTNNB1	Amp_7p14.3	0.505	1
MED12	Del_6q14.3	0.505	1
MUC17	Amp_1q22	0.505	1
PIK3CA	Amp_7p14.3	0.505	1
TP53BP1	Del_8p21.3	0.505	1
BRAF	18q-Del	0.506	1
ZFHX3	Del_5q11.2	0.506	1
18q-Del	Amp_Xq27.1	0.506	1
Amp_8q22.1	Del_10q23.31	0.506	1
Del_5q11.2	Del_6p25.1	0.506	1
BHLHE22	Del_17p13.1	0.507	1
ERN1	Del_17p13.1	0.507	1
FAM120B	Del_17p13.1	0.507	1
GAGE2D	Del_17p13.1	0.507	1
MYOT	Del_17p13.1	0.507	1
POM121	Del_17p13.1	0.507	1
Del_2q22.3	Del_17q21.31	0.507	1
LMOD2	Del_18q23	0.508	1
CDKN1B	Del_18q23	0.508	1
KIRREL	Del_18q23	0.508	1
ZFHX3	18p-Del	0.508	1
ZFHX3	Amp_8p11.23	0.508	1
ZNF709	Del_18q23	0.508	1
10p-Del	Del_18q23	0.508	1
18p-Del	Del_6p25.1	0.508	1
Amp_8p11.23	Del_6p25.1	0.508	1
Amp_9q33.3	Del_3p13	0.508	1
Amp_7p14.3	Del_21q22.3	0.51	1
Del_11p11.2	Del_21q22.3	0.511	1
Amp_9q33.3	Del_15q21.3	0.512	1
Del_5q21.1	Del_21q22.2	0.513	1
TP53	Del_5q21.1	0.514	1
HRAS	Del_5q11.2	0.515	1
IDH1	Del_5q11.2	0.515	1
LCE2D	Del_12p13.1	0.515	1
NKX3-1	Del_12p13.1	0.515	1
CDKN1B	Del_5q11.2	0.515	1
EHHADH	Del_5q11.2	0.515	1
ZNF709	Del_5q11.2	0.515	1
10p-Del	Del_5q11.2	0.515	1
Amp_Xq21.1	Del_5q11.2	0.515	1
OR4D5	Del_13q14.13	0.516	1
BMP2K	Del_13q14.13	0.516	1
TNRC18	Del_13q14.13	0.516	1
MED12	Del_21q22.3	0.518	1
PTEN	Del_4q28.2	0.518	1
LAMA3	Del_21q22.3	0.518	1
SMG7	Del_21q22.3	0.518	1
Amp_4q13.3	Del_21q22.3	0.518	1
Amp_Xp21.1	Del_21q22.3	0.518	1
COL11A1	Del_1q42.3	0.519	1
CTNNB1	17p-Del	0.519	1
CTNNB1	Del_1q42.3	0.519	1
PIK3CA	Del_1q42.3	0.519	1
3q-Amp	Del_1q42.3	0.519	1
17p-Del	Amp_1q22	0.519	1
Amp_1q22	Del_1q42.3	0.519	1
Amp_11q13.2	Del_1p31.3	0.52	1
OR4D5	TP53	0.521	1
OR4D5	Del_17q21.31	0.521	1
TP53	BMP2K	0.521	1
TP53	MED15	0.521	1
TP53	RPTN	0.521	1
TP53	3p-Amp	0.521	1
TP53	Xp-Del	0.521	1
TP53	Xq-Del	0.521	1
TP53	Amp_13q12.11	0.521	1
TP53	Amp_20q13.2	0.521	1
CNTNAP1	Del_17q21.31	0.521	1
RPTN	Del_17q21.31	0.521	1
TNRC18	Del_17q21.31	0.521	1
3p-Amp	Del_17q21.31	0.521	1
Amp_13q12.11	Del_17q21.31	0.521	1
Amp_20q13.2	Del_17q21.31	0.521	1
SMG7	16q-Del	0.522	1
TP53BP1	16q-Del	0.522	1
GRIA1	7p-Amp	0.524	1
Amp_7q22.1	Del_12p13.1	0.524	1
ZMYM3	Del_13q22.1	0.525	1
FAM47C	Del_13q22.1	0.525	1
ZFHX3	Del_1p22.1	0.525	1
ZFHX3	Del_21q22.2	0.525	1
Amp_14q21.1	Del_13q22.1	0.525	1
8p-Del	Del_4q28.2	0.528	1
NTM	Del_2q22.1	0.529	1
OR4D5	Del_2q22.1	0.529	1
BMP2K	Del_2q22.1	0.529	1
CNTNAP1	Del_2q22.1	0.529	1
TNRC18	Del_2q22.1	0.529	1
10q-Del	Del_2q22.1	0.529	1
8q-Del	Del_2q22.1	0.529	1
Amp_15q11.2	Del_2q22.1	0.529	1
BHLHE22	Del_10q23.31	0.534	1
EPB41L3	Del_12p13.1	0.534	1
GRIA1	Del_12p13.1	0.534	1
PTEN	SPOP	0.534	1
GAGE2D	Del_10q23.31	0.534	1
MYOT	Del_10q23.31	0.534	1
POM121	Del_10q23.31	0.534	1
Del_12q24.32	Del_17q21.31	0.534	1
PTEN	8p-Amp	0.536	1
PTEN	Del_9p23	0.536	1
PTEN	Del_19q13.2	0.536	1
18p-Del	Amp_11q13.2	0.536	1
BRAF	Del_10q23.31	0.538	1
EPB41L3	MUC17	0.538	1
GRIA1	MUC17	0.538	1
GRIA1	Amp_7p14.3	0.538	1
NTM	8q-Amp	0.538	1
BMP2K	8q-Amp	0.538	1
MED15	8q-Amp	0.538	1
8q-Amp	10q-Del	0.538	1
8q-Amp	8q-Del	0.538	1
ANO4	Del_2q22.3	0.541	1
MED12	Del_2q22.3	0.541	1
SMG7	Del_2q22.3	0.541	1
TP53BP1	Del_2q22.3	0.541	1
Amp_4q13.3	Del_2q22.3	0.541	1
Amp_Xp21.1	Del_2q22.3	0.541	1
EMG1	Del_8p21.3	0.542	1
LCE2D	Del_8p21.3	0.542	1
RPL11	Del_8p21.3	0.542	1
ESCO1	Del_8p21.3	0.542	1
MLLT10	Del_8p21.3	0.542	1
ATM	Del_6p25.1	0.543	1
BHLHE22	8p-Del	0.544	1
KIDINS220	8p-Del	0.544	1
EDC4	8p-Del	0.544	1
ERN1	8p-Del	0.544	1
GAGE2D	8p-Del	0.544	1
POM121	8p-Del	0.544	1
8q-Amp	Del_3p13	0.545	1
CTNNB1	Del_21q22.3	0.546	1
Del_1q42.3	Del_17q21.31	0.546	1
Del_2q22.3	Del_9p23	0.547	1
COL11A1	7q-Amp	0.549	1
COL11A1	Del_1p31.3	0.549	1
COL11A1	Del_11q23.2	0.549	1
CTNNB1	Del_1p31.3	0.549	1
PIK3CA	Del_11q23.2	0.549	1
Amp_1q22	Del_1p31.3	0.549	1
Amp_3q21.3	Del_18q21.31	0.549	1
Del_4q28.2	Del_18q21.31	0.549	1
MED12	18q-Del	0.551	1
SLC27A4	Del_13q14.13	0.551	1
SMG7	18q-Del	0.551	1
TP53BP1	18q-Del	0.551	1
BRAF	8p-Del	0.552	1
EPB41L3	17p-Del	0.552	1
EPB41L3	Del_1q42.3	0.552	1
FOXA1	GRIA1	0.552	1
GRIA1	Del_1q42.3	0.552	1
MUC17	Amp_7p14.3	0.552	1
8p-Del	Amp_Xp22.11	0.552	1
Amp_11q13.2	Del_1p22.1	0.552	1
Amp_11q13.2	Del_21q22.2	0.552	1
KDM6A	Del_8p23.2	0.554	1
Amp_14q21.1	Del_8p23.2	0.554	1
Del_5q11.2	Del_17q21.31	0.554	1
EMG1	Amp_8q24.21	0.557	1
LCE2D	Amp_8q24.21	0.557	1
RPL11	Amp_8q24.21	0.557	1
ESCO1	Amp_8q24.21	0.557	1
TCEB3	Amp_8q24.21	0.557	1
TCERG1	Amp_8q24.21	0.557	1
HRAS	SPOP	0.558	1
IDH1	SPOP	0.558	1
LMOD2	SPOP	0.558	1
OR4P4	SPOP	0.558	1
SPOP	CDKN1B	0.558	1
SPOP	CR1L	0.558	1
SPOP	ZNF709	0.558	1
SPOP	1q-Amp	0.558	1
SPOP	10p-Del	0.558	1
SPOP	22q-Del	0.558	1
SPOP	Amp_17q23.2	0.558	1
SALL1	7p-Amp	0.559	1
SPOP	13q-Del	0.559	1
ZMYM3	7p-Amp	0.559	1
Del_3p13	Del_6q14.3	0.559	1
ZFHX3	8p-Amp	0.561	1
ZFHX3	12p-Del	0.561	1
ZFHX3	Del_19q13.2	0.561	1
7q-Amp	Del_12p13.1	0.561	1
8p-Amp	Del_6p25.1	0.561	1
12p-Del	Del_6p25.1	0.561	1
13q-Del	Del_12p13.1	0.561	1
Del_6p25.1	Del_9p23	0.561	1
LCE2D	Amp_8q22.1	0.563	1
RPL11	Amp_8q22.1	0.563	1
ESCO1	Amp_8q22.1	0.563	1
SMG7	Del_16q22.3	0.563	1
TCEB3	Amp_8q22.1	0.563	1
TCERG1	Amp_8q22.1	0.563	1
TP53BP1	Del_16q22.3	0.563	1
COL11A1	18p-Del	0.565	1
CTNNB1	18p-Del	0.565	1
CTNNB1	Amp_3q26.2	0.565	1
PIK3CA	Amp_3q26.2	0.565	1
3q-Amp	18p-Del	0.565	1
18p-Del	Amp_1q22	0.565	1
GRIA1	Amp_7q22.1	0.566	1
HRAS	Del_3p13	0.566	1
IDH1	Del_3p13	0.566	1
IDH1	Del_5q13.2	0.566	1
LMOD2	Del_3p13	0.566	1
LMOD2	Del_5q13.2	0.566	1
OR4P4	Del_3p13	0.566	1
CDKN1B	Del_5q13.2	0.566	1
CR1L	Del_3p13	0.566	1
EHHADH	Del_5q13.2	0.566	1
KIRREL	Del_3p13	0.566	1
ZNF709	Del_5q13.2	0.566	1
10p-Del	Del_5q13.2	0.566	1
Amp_17q23.2	Del_3p13	0.566	1
Amp_Xq21.1	Del_5q13.2	0.566	1
Amp_Xq25	Del_3p13	0.566	1
Del_12q24.32	Del_21q22.3	0.567	1
FAM111A	Del_13q22.1	0.568	1
GAGE2D	Del_13q22.1	0.568	1
MYOT	Del_13q22.1	0.568	1
POM121	Del_13q22.1	0.568	1
L1CAM	Del_17p13.1	0.569	1
LAMA3	Del_17p13.1	0.569	1
SMG7	Del_17p13.1	0.569	1
Amp_Xp21.1	Del_17p13.1	0.569	1
PTEN	TP53	0.57	1
LILRB5	MUC17	0.572	1
MUC17	RAG1	0.572	1
MUC17	SALL1	0.572	1
MUC17	ZMYM3	0.572	1
MUC17	FAM47C	0.572	1
SALL1	Amp_7p14.3	0.572	1
ZMYM3	Amp_7p14.3	0.572	1
SPOP	Del_6p25.1	0.573	1
BMP2K	16q-Del	0.573	1
BMP2K	Del_16q24.1	0.573	1
CNTNAP1	16q-Del	0.573	1
TNRC18	16q-Del	0.573	1
10q-Del	16q-Del	0.573	1
10q-Del	Del_16q24.1	0.573	1
Amp_20q13.2	Del_16q24.1	0.573	1
FOXA1	MUC17	0.574	1
EMG1	Del_5q21.1	0.575	1
NKX3-1	Del_5q21.1	0.575	1
PTEN	Del_11p11.2	0.575	1
RPL11	Del_5q21.1	0.575	1
RPL11	Del_18q21.31	0.575	1
TP53	Amp_7q22.1	0.575	1
ESCO1	Del_5q21.1	0.575	1
ESCO1	Del_18q21.31	0.575	1
TCEB3	Del_5q21.1	0.575	1
TCEB3	Del_18q21.31	0.575	1
TCERG1	Del_5q21.1	0.575	1
Amp_3q26.2	Del_17p13.1	0.575	1
COL11A1	Del_18q21.31	0.576	1
CTNNB1	Del_5q21.1	0.576	1
CTNNB1	Del_18q21.31	0.576	1
GRIA1	Del_16q24.1	0.576	1
PIK3CA	Del_5q21.1	0.576	1
3q-Amp	Del_18q21.31	0.576	1
KDM6A	Del_8p21.3	0.579	1
LILRB5	Del_8p21.3	0.579	1
EPB41L3	13q-Del	0.58	1
EPB41L3	Del_1p31.3	0.58	1
EPB41L3	Del_11q23.2	0.58	1
GRIA1	7q-Amp	0.58	1
GRIA1	13q-Del	0.58	1
GRIA1	Del_11q23.2	0.58	1
SALL1	Del_13q14.13	0.58	1
Amp_14q21.1	Del_13q14.13	0.58	1
CTNNB1	Del_1p22.1	0.581	1
CTNNB1	Del_21q22.2	0.581	1
HRAS	TP53	0.581	1
HRAS	Del_17q21.31	0.581	1
IDH1	TP53	0.581	1
IDH1	Del_17q21.31	0.581	1
LMOD2	TP53	0.581	1
OR4P4	Del_17q21.31	0.581	1
PIK3CA	Del_21q22.2	0.581	1
TP53	CDKN1B	0.581	1
TP53	EHHADH	0.581	1
TP53	KIRREL	0.581	1
TP53	1q-Amp	0.581	1
TP53	Amp_Xq25	0.581	1
ZNF709	Del_17q21.31	0.581	1
3q-Amp	Del_1p22.1	0.581	1
3q-Amp	Del_21q22.2	0.581	1
10p-Del	Del_17q21.31	0.581	1
22q-Del	Del_17q21.31	0.581	1
Amp_1q22	Del_1p22.1	0.581	1
Amp_1q22	Del_21q22.2	0.581	1
Amp_Xq25	Del_17q21.31	0.581	1
Del_6q14.3	Del_10q23.31	0.581	1
RPL11	Del_18q23	0.582	1
ESCO1	Del_18q23	0.582	1
TCEB3	Del_18q23	0.582	1
SPOP	Amp_8q22.1	0.584	1
ZFHX3	Del_5q13.2	0.585	1
APC	Del_1q42.3	0.586	1
COL11A1	Del_18q23	0.586	1
FOXA1	KDM6A	0.586	1
FOXA1	RAG1	0.586	1
FOXA1	ZMYM3	0.586	1
FOXA1	FAM47C	0.586	1
KDM6A	17p-Del	0.586	1
KDM6A	Del_1q42.3	0.586	1
LILRB5	17p-Del	0.586	1
LILRB5	Del_1q42.3	0.586	1
RAG1	Del_1q42.3	0.586	1
SALL1	Del_1q42.3	0.586	1
ZMYM3	Del_1q42.3	0.586	1
FAM47C	17p-Del	0.586	1
FAM47C	Del_1q42.3	0.586	1
3q-Amp	Del_18q23	0.586	1
12p-Del	Del_5q21.1	0.586	1
Amp_16q11.2	Del_1q42.3	0.586	1
Del_5q21.1	Del_9p23	0.586	1
SLC27A4	Del_16q24.1	0.587	1
Amp_11q13.2	Del_19q13.2	0.587	1
NKX3-1	Del_5q11.2	0.588	1
RPL11	Del_5q11.2	0.588	1
HRAS	Del_2q22.1	0.589	1
IDH1	Del_2q22.1	0.589	1
LMOD2	Del_2q22.1	0.589	1
OR4P4	Del_2q22.1	0.589	1
CDKN1B	Del_2q22.1	0.589	1
ZNF709	Del_2q22.1	0.589	1
22q-Del	Del_2q22.1	0.589	1
Amp_17q23.2	Del_2q22.1	0.589	1
Amp_Xq21.1	Del_2q22.1	0.589	1
Amp_Xq25	Del_2q22.1	0.589	1
LILRB5	Del_12p13.1	0.59	1
ZMYM3	Del_12p13.1	0.59	1
Amp_16q11.2	Del_12p13.1	0.59	1
NTM	Del_2q22.3	0.591	1
OR4D5	Del_2q22.3	0.591	1
BMP2K	Del_2q22.3	0.591	1
CNTNAP1	Del_2q22.3	0.591	1
MED15	Del_2q22.3	0.591	1
MED15	Del_6q14.3	0.591	1
RPTN	Del_2q22.3	0.591	1
RPTN	Del_6q14.3	0.591	1
TNRC18	Del_2q22.3	0.591	1
3p-Amp	Del_2q22.3	0.591	1
Amp_15q11.2	Del_2q22.3	0.591	1
Amp_15q11.2	Del_6q14.3	0.591	1
Amp_20q13.2	Del_2q22.3	0.591	1
Del_5q13.2	Del_21q22.3	0.591	1
EPB41L3	18p-Del	0.595	1
EPB41L3	Amp_3q26.2	0.595	1
EPB41L3	Amp_8p11.23	0.595	1
FOXA1	17p-Del	0.595	1
GRIA1	Amp_3q26.2	0.595	1
GRIA1	Amp_8p11.23	0.595	1
COL11A1	Del_5q11.2	0.596	1
PTEN	Amp_9q33.3	0.596	1
PTEN	Del_12q24.32	0.596	1
ATM	COL11A1	0.597	1
ATM	CTNNB1	0.597	1
ATM	PIK3CA	0.597	1
BRAF	7p-Amp	0.597	1
COL11A1	Del_11q22.3	0.597	1
CTNNB1	Amp_3q21.3	0.597	1
EPB41L3	Amp_8q24.21	0.597	1
HRAS	8q-Amp	0.597	1
IDH1	8q-Amp	0.597	1
LMOD2	8q-Amp	0.597	1
OR4P4	8q-Amp	0.597	1
PIK3CA	Amp_3q21.3	0.597	1
PIK3CA	Del_4q28.2	0.597	1
PIK3CA	Del_11q22.3	0.597	1
CDKN1B	8q-Amp	0.597	1
EHHADH	8q-Amp	0.597	1
KIRREL	8q-Amp	0.597	1
3q-Amp	Del_11q22.3	0.597	1
7p-Amp	Amp_Xq27.1	0.597	1
8q-Amp	10p-Del	0.597	1
8q-Amp	Amp_Xq21.1	0.597	1
8q-Amp	Amp_Xq25	0.597	1
GRIA1	Del_6q14.3	0.598	1
LMOD2	Del_8p23.2	0.598	1
SLC27A4	Del_6q14.3	0.598	1
EHHADH	Del_8p23.2	0.598	1
ZNF709	Del_8p23.2	0.598	1
SALL1	Amp_7q22.1	0.599	1
SPOP	Del_12p13.1	0.599	1
ZMYM3	Amp_7q22.1	0.599	1
ZFHX3	Del_11p11.2	0.599	1
Amp_8p11.23	Del_12p13.1	0.599	1
Amp_8q22.1	Del_1q42.3	0.599	1
8p-Del	Del_5q21.1	0.6	1
OR4D5	18q-Del	0.601	1
BMP2K	18q-Del	0.601	1
CNTNAP1	18q-Del	0.601	1
RPTN	18q-Del	0.601	1
3p-Amp	18q-Del	0.601	1
18q-Del	Amp_13q12.11	0.601	1
18q-Del	Amp_15q11.2	0.601	1
18q-Del	Amp_20q13.2	0.601	1
OR4D5	Del_21q22.3	0.603	1
BMP2K	Del_21q22.3	0.603	1
MED15	Del_21q22.3	0.603	1
Amp_3q26.2	Del_3p13	0.605	1
EPB41L3	Amp_8q22.1	0.606	1
GRIA1	Amp_8q22.1	0.606	1
PTEN	Del_6q14.3	0.606	1
SLC27A4	Del_21q22.3	0.606	1
Amp_7p14.3	Del_17p13.1	0.606	1
BHLHE22	Del_12p13.1	0.608	1
GAGE2D	Del_12p13.1	0.608	1
MYOT	Del_12p13.1	0.608	1
POM121	Del_12p13.1	0.608	1
ZFHX3	Del_17q21.31	0.608	1
BRAF	Amp_7p14.3	0.609	1
CTNNB1	Del_17p13.1	0.609	1
MED12	Del_10q23.31	0.609	1
MUC17	Amp_Xp22.11	0.609	1
L1CAM	Del_10q23.31	0.609	1
LAMA3	Del_10q23.31	0.609	1
TP53BP1	Del_10q23.31	0.609	1
3q-Amp	Del_17p13.1	0.609	1
Amp_4q13.3	Del_10q23.31	0.609	1
Amp_7p14.3	Amp_Xq27.1	0.609	1
Amp_Xp21.1	Del_10q23.31	0.609	1
MUC17	Del_18q23	0.61	1
EPB41L3	Del_1p22.1	0.611	1
EPB41L3	Del_21q22.2	0.611	1
GRIA1	Del_21q22.2	0.611	1
Del_2q22.1	Del_10q23.31	0.611	1
Del_5q11.2	Del_15q21.3	0.611	1
APC	Del_11q23.2	0.613	1
KDM6A	Del_1p31.3	0.613	1
LILRB5	13q-Del	0.613	1
LILRB5	Del_1p31.3	0.613	1
LILRB5	Del_11q23.2	0.613	1
RAG1	13q-Del	0.613	1
RAG1	Del_1p31.3	0.613	1
RAG1	Del_11q23.2	0.613	1
SALL1	7q-Amp	0.613	1
SALL1	Del_1p31.3	0.613	1
SALL1	Del_11q23.2	0.613	1
ZMYM3	7q-Amp	0.613	1
ZMYM3	13q-Del	0.613	1
ZMYM3	Del_1p31.3	0.613	1
ZMYM3	Del_11q23.2	0.613	1
FAM47C	13q-Del	0.613	1
FAM47C	Del_1p31.3	0.613	1
FAM47C	Del_11q23.2	0.613	1
13q-Del	Amp_14q21.1	0.613	1
Amp_14q21.1	Del_1p31.3	0.613	1
COL11A1	12p-Del	0.614	1
COL11A1	Del_19q13.2	0.614	1
CTNNB1	12p-Del	0.614	1
CTNNB1	Del_9p23	0.614	1
CTNNB1	Del_19q13.2	0.614	1
PIK3CA	Del_9p23	0.614	1
3q-Amp	12p-Del	0.614	1
3q-Amp	Del_15q21.3	0.614	1
12p-Del	Amp_1q22	0.614	1
Amp_1q22	Del_15q21.3	0.614	1
Amp_1q22	Del_19q13.2	0.614	1
12p-Del	Del_6q14.3	0.615	1
HRAS	Del_13q14.13	0.618	1
IDH1	Del_13q14.13	0.618	1
MUC17	Del_1p31.3	0.618	1
CR1L	Del_13q14.13	0.618	1
Amp_Xq21.1	Del_13q14.13	0.618	1
Amp_Xq25	Del_13q14.13	0.618	1
MUC17	16q-Del	0.619	1
ZFHX3	Amp_9q33.3	0.619	1
ZFHX3	Del_12q24.32	0.619	1
BRAF	FOXA1	0.622	1
FOXA1	Amp_Xp22.11	0.622	1
FOXA1	Amp_Xq27.1	0.622	1
9q-Amp	Del_1q42.3	0.622	1
Amp_12q23.1	Del_1q42.3	0.622	1
Amp_Xp22.11	Del_1q42.3	0.622	1
Amp_Xq27.1	Del_1q42.3	0.622	1
NTM	Del_8p21.3	0.623	1
OR4D5	Del_8p21.3	0.623	1
BMP2K	Del_8p21.3	0.623	1
CNTNAP1	Del_8p21.3	0.623	1
L1CAM	8p-Del	0.623	1
LAMA3	8p-Del	0.623	1
MED15	Del_8p21.3	0.623	1
8p-Del	Amp_Xp21.1	0.623	1
EPB41L3	Del_5q21.1	0.624	1
GRIA1	Del_18q21.31	0.624	1
ATM	EPB41L3	0.626	1
ATM	GRIA1	0.626	1
EPB41L3	Amp_3q21.3	0.626	1
EPB41L3	Del_4q28.2	0.626	1
EPB41L3	Del_11q22.3	0.626	1
GRIA1	Amp_3q21.3	0.626	1
GRIA1	Del_4q28.2	0.626	1
APC	18p-Del	0.627	1
KDM6A	Amp_3q26.2	0.627	1
RAG1	Amp_3q26.2	0.627	1
RAG1	Amp_8p11.23	0.627	1
SALL1	18p-Del	0.627	1
SALL1	Amp_3q26.2	0.627	1
SALL1	Amp_8p11.23	0.627	1
ZMYM3	18p-Del	0.627	1
ZMYM3	Amp_3q26.2	0.627	1
ZMYM3	Amp_8p11.23	0.627	1
FAM47C	18p-Del	0.627	1
FAM47C	Amp_3q26.2	0.627	1
FAM47C	Amp_8p11.23	0.627	1
12p-Del	Del_13q22.1	0.627	1
EMG1	SPOP	0.628	1
NKX3-1	SPOP	0.628	1
RPL11	SPOP	0.628	1
SPOP	ESCO1	0.628	1
SPOP	TCEB3	0.628	1
SPOP	TCERG1	0.628	1
IDH1	16q-Del	0.629	1
LMOD2	16q-Del	0.629	1
CDKN1B	16q-Del	0.629	1
CR1L	16q-Del	0.629	1
EHHADH	16q-Del	0.629	1
KIRREL	16q-Del	0.629	1
16q-Del	22q-Del	0.629	1
16q-Del	Amp_Xq21.1	0.629	1
16q-Del	Amp_Xq25	0.629	1
SLC27A4	Del_16q22.3	0.632	1
ZFHX3	8q-Amp	0.632	1
8q-Amp	Del_6p25.1	0.632	1
GRIA1	Del_18q23	0.634	1
LCE2D	Del_3p13	0.634	1
NKX3-1	Del_5q13.2	0.634	1
RPL11	Del_5q13.2	0.634	1
TP53	Amp_8p11.23	0.634	1
ESCO1	Del_3p13	0.634	1
MLLT10	Del_3p13	0.634	1
TCEB3	Del_3p13	0.634	1
TCERG1	Del_3p13	0.634	1
BRAF	Amp_7q22.1	0.635	1
Amp_7q22.1	Amp_12q23.1	0.635	1
Amp_7q22.1	Amp_Xq27.1	0.635	1
BRAF	Del_8p23.2	0.637	1
MED12	7p-Amp	0.637	1
L1CAM	7p-Amp	0.637	1
SMG7	7p-Amp	0.637	1
17p-Del	Del_11q23.2	0.637	1
Amp_Xq27.1	Del_8p23.2	0.637	1
Del_1p22.1	Del_12p13.1	0.637	1
PTEN	ZFHX3	0.639	1
MUC17	18p-Del	0.64	1
MUC17	Del_16q24.1	0.64	1
18p-Del	Amp_7p14.3	0.64	1
Amp_9q33.3	Del_2q22.3	0.64	1
Del_6p25.1	Del_16q24.1	0.641	1
EPB41L3	8p-Amp	0.642	1
EPB41L3	Del_9p23	0.642	1
EPB41L3	Del_15q21.3	0.642	1
EPB41L3	Del_19q13.2	0.642	1
GRIA1	Del_9p23	0.642	1
GRIA1	Del_15q21.3	0.642	1
KDM6A	Del_1p22.1	0.642	1
KDM6A	Del_21q22.2	0.642	1
LILRB5	Del_1p22.1	0.642	1
LILRB5	Del_21q22.2	0.642	1
RAG1	Del_1p22.1	0.642	1
RAG1	Del_21q22.2	0.642	1
SALL1	Del_1p22.1	0.642	1
SALL1	Del_21q22.2	0.642	1
ZMYM3	Del_1p22.1	0.642	1
FAM47C	Del_1p22.1	0.642	1
6q-Del	Del_9p23	0.642	1
6q-Del	Del_15q21.3	0.642	1
Amp_3q26.2	Del_10q23.31	0.642	1
Amp_14q21.1	Del_1p22.1	0.642	1
Amp_16q11.2	Del_1p22.1	0.642	1
GRIA1	Del_5q11.2	0.643	1
8p-Del	Del_2q22.1	0.643	1
CNTNAP1	Del_16q22.3	0.644	1
Amp_20q13.2	Del_16q22.3	0.644	1
KIDINS220	Amp_8q24.21	0.645	1
EDC4	Amp_8q24.21	0.645	1
FAM111A	Amp_8q24.21	0.645	1
GAGE2D	Amp_8q24.21	0.645	1
MYOT	Amp_8q24.21	0.645	1
POM121	Amp_8q24.21	0.645	1
7p-Amp	Del_1p22.1	0.645	1
7p-Amp	Del_21q22.2	0.645	1
HRAS	Del_2q22.3	0.646	1
IDH1	Del_2q22.3	0.646	1
CDKN1B	Del_2q22.3	0.646	1
CR1L	Del_2q22.3	0.646	1
ZNF709	Del_2q22.3	0.646	1
1q-Amp	Del_2q22.3	0.646	1
22q-Del	Del_2q22.3	0.646	1
Amp_17q23.2	Del_2q22.3	0.646	1
Amp_Xq25	Del_2q22.3	0.646	1
Del_3p13	Del_18q21.31	0.647	1
Del_10q23.31	Del_11p11.2	0.647	1
BRAF	7q-Amp	0.648	1
BRAF	13q-Del	0.648	1
BRAF	Del_1p31.3	0.648	1
BRAF	Del_11q23.2	0.648	1
KDM6A	Del_16q24.1	0.648	1
LCE2D	TP53	0.648	1
NKX3-1	TP53	0.648	1
NKX3-1	Del_17q21.31	0.648	1
RPL11	TP53	0.648	1
SALL1	Del_16q24.1	0.648	1
SMAD4	Del_17q21.31	0.648	1
TP53	ESCO1	0.648	1
ESCO1	Del_17q21.31	0.648	1
MLLT10	Del_17q21.31	0.648	1
7q-Amp	Amp_12q23.1	0.648	1
7q-Amp	Amp_Xq27.1	0.648	1
9q-Amp	Del_1p31.3	0.648	1
9q-Amp	Del_11q23.2	0.648	1
13q-Del	Amp_Xq27.1	0.648	1
Amp_12q23.1	Del_1p31.3	0.648	1
Amp_Xp22.11	Del_11q23.2	0.648	1
Amp_Xq27.1	Del_1p31.3	0.648	1
Amp_Xq27.1	Del_11q23.2	0.648	1
Del_5q21.1	Del_8p23.2	0.648	1
BRAF	Del_12p13.1	0.649	1
MED12	Amp_7p14.3	0.649	1
MUC17	SMG7	0.649	1
MUC17	TP53BP1	0.649	1
MUC17	Amp_4q13.3	0.649	1
MUC17	Amp_Xp21.1	0.649	1
PIK3CA	Del_11p11.2	0.649	1
RAG1	Amp_8q24.21	0.649	1
CNTNAP1	Del_17p13.1	0.649	1
MED15	Del_17p13.1	0.649	1
SMG7	Amp_7p14.3	0.649	1
3p-Amp	Del_17p13.1	0.649	1
Xp-Del	Del_17p13.1	0.649	1
Xq-Del	Del_17p13.1	0.649	1
Amp_1q22	Del_11p11.2	0.649	1
Amp_13q12.11	Del_17p13.1	0.649	1
Amp_20q13.2	Del_17p13.1	0.649	1
Amp_Xp22.11	Del_12p13.1	0.649	1
KIDINS220	Amp_8q22.1	0.65	1
ERN1	Amp_8q22.1	0.65	1
FAM111A	Amp_8q22.1	0.65	1
GAGE2D	Amp_8q22.1	0.65	1
MYOT	Amp_8q22.1	0.65	1
POM121	Amp_8q22.1	0.65	1
LMOD2	18q-Del	0.654	1
SPOP	Del_11q22.3	0.654	1
CDKN1B	18q-Del	0.654	1
EHHADH	18q-Del	0.654	1
KIRREL	18q-Del	0.654	1
ZNF709	18q-Del	0.654	1
10p-Del	18q-Del	0.654	1
18q-Del	Amp_17q23.2	0.654	1
18q-Del	Amp_Xq25	0.654	1
LCE2D	Del_2q22.1	0.655	1
RPL11	Del_2q22.1	0.655	1
ESCO1	Del_2q22.1	0.655	1
MLLT10	Del_2q22.1	0.655	1
TCEB3	Del_2q22.1	0.655	1
ANO4	Del_13q22.1	0.656	1
PIK3CA	SPOP	0.656	1
SPOP	Amp_1q22	0.656	1
Amp_8q22.1	Del_17q21.31	0.656	1
APC	ATM	0.657	1
APC	Del_4q28.2	0.657	1
ATM	KDM6A	0.657	1
ATM	RAG1	0.657	1
ATM	SALL1	0.657	1
ATM	ZMYM3	0.657	1
ATM	FAM47C	0.657	1
ATM	Amp_14q21.1	0.657	1
KDM6A	Amp_3q21.3	0.657	1
LILRB5	Del_11q22.3	0.657	1
RAG1	Amp_3q21.3	0.657	1
RAG1	Del_4q28.2	0.657	1
RAG1	Del_11q22.3	0.657	1
SALL1	Del_4q28.2	0.657	1
ZMYM3	Amp_3q21.3	0.657	1
ZMYM3	Del_4q28.2	0.657	1
FAM47C	Amp_3q21.3	0.657	1
FAM47C	Del_4q28.2	0.657	1
FAM47C	Del_11q22.3	0.657	1
3q-Amp	Del_10q23.31	0.657	1
Amp_14q21.1	Del_4q28.2	0.657	1
Amp_16q11.2	Del_4q28.2	0.657	1
RAG1	Amp_8q22.1	0.658	1
SLC27A4	Del_10q23.31	0.659	1
17p-Del	Amp_8p11.23	0.659	1
Amp_3q26.2	Del_1q42.3	0.659	1
Amp_8p11.23	Del_1q42.3	0.659	1
ANO4	FOXA1	0.66	1
ANO4	Del_1q42.3	0.66	1
FOXA1	MED12	0.66	1
FOXA1	L1CAM	0.66	1
FOXA1	LAMA3	0.66	1
FOXA1	TP53BP1	0.66	1
FOXA1	Amp_Xp21.1	0.66	1
MED12	17p-Del	0.66	1
MED12	Del_1q42.3	0.66	1
LAMA3	17p-Del	0.66	1
LAMA3	Del_1q42.3	0.66	1
TP53BP1	17p-Del	0.66	1
Amp_Xp21.1	Del_1q42.3	0.66	1
BHLHE22	Del_18q21.31	0.661	1
BRAF	18p-Del	0.661	1
BRAF	Amp_3q26.2	0.661	1
BRAF	Amp_8p11.23	0.661	1
ERN1	Del_18q21.31	0.661	1
FAM111A	Del_5q21.1	0.661	1
FAM120B	Del_5q21.1	0.661	1
FAM120B	Del_18q21.31	0.661	1
GAGE2D	Del_5q21.1	0.661	1
GAGE2D	Del_18q21.31	0.661	1
POM121	Del_5q21.1	0.661	1
POM121	Del_18q21.31	0.661	1
9q-Amp	Amp_3q26.2	0.661	1
18p-Del	Amp_Xp22.11	0.661	1
18p-Del	Amp_Xq27.1	0.661	1
Amp_8p11.23	Amp_Xp22.11	0.661	1
Amp_8p11.23	Amp_Xq27.1	0.661	1
Amp_Xp22.11	Del_13q14.13	0.661	1
LCE2D	8q-Amp	0.662	1
NKX3-1	8q-Amp	0.662	1
PTEN	Amp_11q13.2	0.662	1
RPL11	8q-Amp	0.662	1
ESCO1	8q-Amp	0.662	1
TCEB3	8q-Amp	0.662	1
TCERG1	8q-Amp	0.662	1
Amp_7p14.3	Del_21q22.2	0.663	1
Amp_3q21.3	Del_17p13.1	0.665	1
Amp_8q22.1	Del_1p31.3	0.665	1
8p-Del	Del_11p11.2	0.666	1
BHLHE22	Del_18q23	0.667	1
COL11A1	Del_12q24.32	0.667	1
CTNNB1	Amp_9q33.3	0.667	1
CTNNB1	Del_5q13.2	0.667	1
CTNNB1	Del_12q24.32	0.667	1
PIK3CA	Amp_9q33.3	0.667	1
ERN1	Del_18q23	0.667	1
FAM120B	Del_18q23	0.667	1
GAGE2D	Del_18q23	0.667	1
POM121	Del_18q23	0.667	1
3q-Amp	Del_3p13	0.667	1
Amp_1q22	Del_3p13	0.667	1
CTNNB1	Del_8p23.2	0.668	1
EHHADH	Del_16q24.1	0.668	1
Amp_16q11.2	Del_6q14.3	0.668	1
Amp_17q23.2	Del_16q24.1	0.668	1
Amp_Xq25	Del_16q24.1	0.668	1
ANO4	Amp_7q22.1	0.672	1
APC	8p-Amp	0.672	1
APC	Del_15q21.3	0.672	1
KDM6A	12p-Del	0.672	1
KDM6A	Del_9p23	0.672	1
KDM6A	Del_15q21.3	0.672	1
KDM6A	Del_19q13.2	0.672	1
KIDINS220	Del_5q11.2	0.672	1
LILRB5	Del_9p23	0.672	1
LILRB5	Del_15q21.3	0.672	1
LILRB5	Del_19q13.2	0.672	1
MED12	Amp_7q22.1	0.672	1
MUC17	Del_12p13.1	0.672	1
RAG1	12p-Del	0.672	1
RAG1	Del_15q21.3	0.672	1
RAG1	Del_19q13.2	0.672	1
SALL1	8p-Amp	0.672	1
SALL1	Del_9p23	0.672	1
SALL1	Del_15q21.3	0.672	1
ZMYM3	8p-Amp	0.672	1
ZMYM3	12p-Del	0.672	1
ZMYM3	Del_9p23	0.672	1
FAM120B	Del_5q11.2	0.672	1
FAM47C	8p-Amp	0.672	1
FAM47C	12p-Del	0.672	1
FAM47C	Del_9p23	0.672	1
FAM47C	Del_15q21.3	0.672	1
GAGE2D	Del_5q11.2	0.672	1
L1CAM	Amp_7q22.1	0.672	1
MYOT	Del_5q11.2	0.672	1
POM121	Del_5q11.2	0.672	1
SMG7	Amp_7q22.1	0.672	1
TP53BP1	Amp_7q22.1	0.672	1
8p-Amp	Amp_14q21.1	0.672	1
12p-Del	Amp_14q21.1	0.672	1
12p-Del	Amp_16q11.2	0.672	1
Amp_14q21.1	Del_9p23	0.672	1
Amp_14q21.1	Del_15q21.3	0.672	1
Amp_14q21.1	Del_19q13.2	0.672	1
Del_11p11.2	Del_18q23	0.672	1
CTNNB1	8p-Del	0.673	1
PIK3CA	8p-Del	0.673	1
8p-Del	Amp_1q22	0.673	1
Amp_7q22.1	Del_18q23	0.673	1
KDM6A	Del_18q21.31	0.674	1
RAG1	Del_5q21.1	0.674	1
SALL1	Del_5q21.1	0.674	1
SALL1	Del_18q21.31	0.674	1
FAM47C	Del_5q21.1	0.674	1
FAM47C	Del_18q21.31	0.674	1
BRAF	Del_21q22.2	0.675	1
EPB41L3	Del_11p11.2	0.675	1
Amp_3q21.3	Del_12p13.1	0.675	1
Amp_12q23.1	Del_1p22.1	0.675	1
Amp_Xp22.11	Del_1p22.1	0.675	1
Amp_Xp22.11	Del_21q22.2	0.675	1
MUC17	Del_10q23.31	0.677	1
Del_1p31.3	Del_11q23.2	0.678	1
NTM	7p-Amp	0.68	1
OR4D5	7p-Amp	0.68	1
BMP2K	7p-Amp	0.68	1
CNTNAP1	7p-Amp	0.68	1
MED15	7p-Amp	0.68	1
RPTN	7p-Amp	0.68	1
TNRC18	7p-Amp	0.68	1
ZFHX3	16q-Del	0.68	1
7p-Amp	Amp_15q11.2	0.68	1
FAM47C	Del_21q22.3	0.681	1
BRAF	Del_8p21.3	0.682	1
ZFHX3	Amp_11q13.2	0.682	1
Amp_11q13.2	Del_6p25.1	0.682	1
Amp_Xq27.1	Del_8p21.3	0.682	1
APC	Del_18q23	0.683	1
HRAS	Del_6q14.3	0.683	1
IDH1	Del_6q14.3	0.683	1
KDM6A	Del_18q23	0.683	1
LMOD2	Del_6q14.3	0.683	1
SALL1	Del_18q23	0.683	1
CDKN1B	Del_6q14.3	0.683	1
EHHADH	Del_6q14.3	0.683	1
FAM47C	Del_18q23	0.683	1
22q-Del	Del_6q14.3	0.683	1
Amp_17q23.2	Del_6q14.3	0.683	1
Amp_Xq25	Del_6q14.3	0.683	1
ANO4	7q-Amp	0.684	1
ANO4	13q-Del	0.684	1
ANO4	Del_11q23.2	0.684	1
MED12	7q-Amp	0.684	1
MED12	13q-Del	0.684	1
MED12	Del_1p31.3	0.684	1
MED12	Del_11q23.2	0.684	1
L1CAM	7q-Amp	0.684	1
L1CAM	13q-Del	0.684	1
L1CAM	Del_1p31.3	0.684	1
L1CAM	Del_11q23.2	0.684	1
LAMA3	Del_1p31.3	0.684	1
SMG7	7q-Amp	0.684	1
SMG7	Del_1p31.3	0.684	1
SMG7	Del_11q23.2	0.684	1
TP53BP1	Del_1p31.3	0.684	1
ZFHX3	Del_12p13.1	0.684	1
Del_6p25.1	Del_12p13.1	0.684	1
BMP2K	Del_10q23.31	0.685	1
RPTN	Del_10q23.31	0.685	1
Amp_13q12.11	Del_10q23.31	0.685	1
Amp_15q11.2	Del_10q23.31	0.685	1
Amp_20q13.2	Del_10q23.31	0.685	1
ATM	MUC17	0.686	1
COL11A1	PTEN	0.686	1
MUC17	Del_11q22.3	0.686	1
PTEN	3q-Amp	0.686	1
PTEN	Amp_1q22	0.686	1
SLC27A4	Del_13q22.1	0.686	1
SPOP	Del_9p23	0.686	1
ZFHX3	Del_8p21.3	0.686	1
COL11A1	TP53	0.687	1
PIK3CA	TP53	0.687	1
PIK3CA	Del_17q21.31	0.687	1
TP53	Amp_1q22	0.687	1
Amp_1q22	Del_17q21.31	0.687	1
Amp_7q22.1	Del_17p13.1	0.687	1
ATM	BRAF	0.688	1
ATM	Amp_12q23.1	0.688	1
BRAF	Amp_3q21.3	0.688	1
BRAF	Del_4q28.2	0.688	1
BRAF	Del_11q22.3	0.688	1
9q-Amp	Amp_3q21.3	0.688	1
Amp_3q21.3	Amp_Xq27.1	0.688	1
Amp_Xp22.11	Del_4q28.2	0.688	1
Amp_Xp22.11	Del_11q22.3	0.688	1
Amp_Xq27.1	Del_4q28.2	0.688	1
Amp_Xq27.1	Del_11q22.3	0.688	1
MUC17	NTM	0.69	1
MUC17	OR4D5	0.69	1
MUC17	BMP2K	0.69	1
MUC17	CNTNAP1	0.69	1
MUC17	TNRC18	0.69	1
MUC17	10q-Del	0.69	1
MUC17	8q-Del	0.69	1
MUC17	Amp_13q12.11	0.69	1
MUC17	Amp_15q11.2	0.69	1
OR4D5	Amp_7p14.3	0.69	1
BMP2K	Amp_7p14.3	0.69	1
MED15	Amp_7p14.3	0.69	1
RPTN	Amp_7p14.3	0.69	1
TNRC18	Amp_7p14.3	0.69	1
KDM6A	Del_5q11.2	0.691	1
LCE2D	16q-Del	0.691	1
NKX3-1	16q-Del	0.691	1
RAG1	Del_5q11.2	0.691	1
RPL11	16q-Del	0.691	1
ESCO1	16q-Del	0.691	1
MLLT10	16q-Del	0.691	1
TCERG1	16q-Del	0.691	1
Amp_14q21.1	Del_5q11.2	0.691	1
EPB41L3	Del_12q24.32	0.692	1
GRIA1	Amp_9q33.3	0.692	1
GRIA1	Del_12q24.32	0.692	1
7p-Amp	Del_19q13.2	0.692	1
8q-Amp	Del_1p22.1	0.692	1
6q-Del	Del_12q24.32	0.692	1
LMOD2	Del_21q22.3	0.693	1
CDKN1B	Del_21q22.3	0.693	1
EHHADH	Del_21q22.3	0.693	1
10p-Del	Del_21q22.3	0.693	1
Amp_9q33.3	Del_10q23.31	0.694	1
Del_11q22.3	Del_17q21.31	0.694	1
MUC17	Del_21q22.3	0.695	1
ANO4	18p-Del	0.696	1
ANO4	Amp_8p11.23	0.696	1
MED12	18p-Del	0.696	1
MED12	Amp_3q26.2	0.696	1
MED12	Amp_8p11.23	0.696	1
L1CAM	18p-Del	0.696	1
L1CAM	Amp_3q26.2	0.696	1
L1CAM	Amp_8p11.23	0.696	1
LAMA3	Amp_3q26.2	0.696	1
SMG7	18p-Del	0.696	1
SMG7	Amp_3q26.2	0.696	1
SMG7	Amp_8p11.23	0.696	1
TP53BP1	18p-Del	0.696	1
18p-Del	Amp_Xp21.1	0.696	1
CTNNB1	Del_2q22.1	0.697	1
PIK3CA	Del_2q22.1	0.697	1
CNTNAP1	8p-Del	0.697	1
MED15	8p-Del	0.697	1
RPTN	8p-Del	0.697	1
TNRC18	8p-Del	0.697	1
8p-Del	Xp-Del	0.697	1
8p-Del	Xq-Del	0.697	1
13q-Del	18p-Del	0.698	1
Amp_3q26.2	Del_1p31.3	0.698	1
SPOP	6q-Del	0.699	1
Del_5q13.2	Del_15q21.3	0.699	1
Del_5q21.1	Del_10q23.31	0.699	1
Amp_7q22.1	Del_1p22.1	0.7	1
Amp_7q22.1	Del_21q22.2	0.7	1
FOXA1	NTM	0.701	1
FOXA1	10q-Del	0.701	1
FOXA1	8q-Del	0.701	1
NTM	17p-Del	0.701	1
NTM	Del_1q42.3	0.701	1
OR4D5	17p-Del	0.701	1
OR4D5	Del_1q42.3	0.701	1
BMP2K	17p-Del	0.701	1
BMP2K	Del_1q42.3	0.701	1
CNTNAP1	17p-Del	0.701	1
CNTNAP1	Del_1q42.3	0.701	1
RPTN	17p-Del	0.701	1
RPTN	Del_1q42.3	0.701	1
TNRC18	Del_1q42.3	0.701	1
3p-Amp	Del_1q42.3	0.701	1
10q-Del	Del_1q42.3	0.701	1
17p-Del	Xp-Del	0.701	1
17p-Del	Xq-Del	0.701	1
17p-Del	Amp_13q12.11	0.701	1
Xp-Del	Del_1q42.3	0.701	1
Xq-Del	Del_1q42.3	0.701	1
Amp_13q12.11	Del_1q42.3	0.701	1
Amp_15q11.2	Del_1q42.3	0.701	1
Amp_20q13.2	Del_1q42.3	0.701	1
BRAF	12p-Del	0.702	1
BRAF	Del_9p23	0.702	1
BRAF	Del_15q21.3	0.702	1
BRAF	Del_19q13.2	0.702	1
ERN1	Del_8p21.3	0.702	1
8p-Amp	Amp_12q23.1	0.702	1
8p-Amp	Amp_Xq27.1	0.702	1
9q-Amp	Del_15q21.3	0.702	1
12p-Del	Amp_Xp22.11	0.702	1
12p-Del	Amp_Xq27.1	0.702	1
Amp_12q23.1	Del_9p23	0.702	1
Amp_12q23.1	Del_19q13.2	0.702	1
Amp_Xp22.11	Del_9p23	0.702	1
Amp_Xp22.11	Del_15q21.3	0.702	1
Amp_Xq27.1	Del_9p23	0.702	1
Amp_Xq27.1	Del_15q21.3	0.702	1
BRAF	Amp_8q24.21	0.703	1
FOXA1	Del_11q22.3	0.703	1
LILRB5	Del_11p11.2	0.703	1
SALL1	Del_11p11.2	0.703	1
ZMYM3	Del_11p11.2	0.703	1
FAM47C	Del_11p11.2	0.703	1
7q-Amp	Del_18q23	0.703	1
Amp_8q24.21	Amp_Xq27.1	0.703	1
Amp_14q21.1	Del_11p11.2	0.703	1
Amp_16q11.2	Del_11p11.2	0.703	1
Del_1q42.3	Del_4q28.2	0.703	1
Del_11q23.2	Del_18q23	0.703	1
ZFHX3	Del_2q22.3	0.704	1
COL11A1	ZFHX3	0.705	1
CTNNB1	Del_6p25.1	0.705	1
KIDINS220	SPOP	0.705	1
PIK3CA	ZFHX3	0.705	1
PIK3CA	Del_6p25.1	0.705	1
RPL11	Del_2q22.3	0.705	1
SMAD4	Del_2q22.3	0.705	1
SPOP	EDC4	0.705	1
SPOP	FAM111A	0.705	1
SPOP	GAGE2D	0.705	1
ESCO1	Del_2q22.3	0.705	1
MLLT10	Del_2q22.3	0.705	1
TCEB3	Del_2q22.3	0.705	1
ZFHX3	Amp_1q22	0.705	1
Amp_1q22	Del_6p25.1	0.705	1
18q-Del	Del_3p13	0.707	1
COL11A1	8q-Amp	0.708	1
ANO4	Del_21q22.2	0.709	1
MED12	Del_1p22.1	0.709	1
MED12	Del_21q22.2	0.709	1
MUC17	8p-Amp	0.709	1
MUC17	Del_9p23	0.709	1
MUC17	Del_19q13.2	0.709	1
L1CAM	Del_21q22.2	0.709	1
LAMA3	Del_1p22.1	0.709	1
LAMA3	Del_21q22.2	0.709	1
SMG7	Del_1p22.1	0.709	1
TP53BP1	Del_21q22.2	0.709	1
6q-Del	Del_3p13	0.709	1
Amp_4q13.3	Del_1p22.1	0.709	1
Amp_4q13.3	Del_21q22.2	0.709	1
Amp_7p14.3	Del_15q21.3	0.709	1
Amp_7p14.3	Del_19q13.2	0.709	1
Amp_Xp21.1	Del_1p22.1	0.709	1
Amp_Xp21.1	Del_21q22.2	0.709	1
BRAF	Amp_8q22.1	0.71	1
EPB41L3	PTEN	0.71	1
GRIA1	PTEN	0.71	1
RPL11	Del_8p23.2	0.71	1
ESCO1	Del_8p23.2	0.71	1
MLLT10	Del_8p23.2	0.71	1
SMG7	Del_12p13.1	0.71	1
TP53BP1	Del_12p13.1	0.71	1
Amp_8q22.1	Amp_Xq27.1	0.71	1
Amp_Xp21.1	Del_12p13.1	0.71	1
BHLHE22	Del_3p13	0.711	1
KIDINS220	Del_3p13	0.711	1
KIDINS220	Del_5q13.2	0.711	1
EDC4	Del_3p13	0.711	1
EDC4	Del_5q13.2	0.711	1
ERN1	Del_3p13	0.711	1
FAM120B	Del_3p13	0.711	1
FAM120B	Del_5q13.2	0.711	1
GAGE2D	Del_3p13	0.711	1
GAGE2D	Del_5q13.2	0.711	1
MYOT	Del_3p13	0.711	1
MYOT	Del_5q13.2	0.711	1
POM121	Del_3p13	0.711	1
POM121	Del_5q13.2	0.711	1
NTM	Amp_7q22.1	0.712	1
OR4D5	Amp_7q22.1	0.712	1
BMP2K	Amp_7q22.1	0.712	1
CNTNAP1	Amp_7q22.1	0.712	1
MED15	Amp_7q22.1	0.712	1
RPTN	Amp_7q22.1	0.712	1
TNRC18	Amp_7q22.1	0.712	1
10q-Del	Amp_7q22.1	0.712	1
8q-Del	Amp_7q22.1	0.712	1
Amp_7q22.1	Amp_15q11.2	0.712	1
COL11A1	Del_13q22.1	0.713	1
LCE2D	18q-Del	0.713	1
NKX3-1	18q-Del	0.713	1
RPL11	18q-Del	0.713	1
ESCO1	18q-Del	0.713	1
TCEB3	18q-Del	0.713	1
16q-Del	Amp_11q13.2	0.714	1
Del_6q14.3	Del_21q22.2	0.714	1
6q-Del	Del_10q23.31	0.715	1
ZFHX3	18q-Del	0.716	1
18q-Del	Del_6p25.1	0.716	1
18p-Del	Amp_3q26.2	0.717	1
SLC27A4	Del_12p13.1	0.718	1
7q-Amp	Del_1p22.1	0.718	1
13q-Del	Del_1p22.1	0.718	1
18q-Del	Amp_7q22.1	0.718	1
Del_1p31.3	Del_21q22.2	0.718	1
Del_11q23.2	Del_21q22.2	0.718	1
APC	Del_12q24.32	0.719	1
KDM6A	Amp_9q33.3	0.719	1
KDM6A	Del_12q24.32	0.719	1
LILRB5	Del_12q24.32	0.719	1
RAG1	Amp_9q33.3	0.719	1
RAG1	Del_12q24.32	0.719	1
SALL1	Amp_9q33.3	0.719	1
SALL1	Del_12q24.32	0.719	1
ZMYM3	Amp_9q33.3	0.719	1
ZMYM3	Del_12q24.32	0.719	1
FAM47C	Amp_9q33.3	0.719	1
FAM47C	Del_12q24.32	0.719	1
Amp_14q21.1	Del_12q24.32	0.719	1
ANO4	Amp_3q21.3	0.721	1
ANO4	Del_4q28.2	0.721	1
ANO4	Del_11q22.3	0.721	1
ATM	MED12	0.721	1
ATM	LAMA3	0.721	1
ATM	TP53BP1	0.721	1
ATM	Amp_4q13.3	0.721	1
MED12	Amp_3q21.3	0.721	1
MED12	Del_4q28.2	0.721	1
MED12	Del_11q22.3	0.721	1
L1CAM	Amp_3q21.3	0.721	1
L1CAM	Del_4q28.2	0.721	1
L1CAM	Del_11q22.3	0.721	1
LAMA3	Amp_3q21.3	0.721	1
LAMA3	Del_11q22.3	0.721	1
SMG7	Amp_3q21.3	0.721	1
SMG7	Del_4q28.2	0.721	1
SMG7	Del_11q22.3	0.721	1
TP53BP1	Del_4q28.2	0.721	1
Amp_4q13.3	Del_4q28.2	0.721	1
Amp_7q22.1	Del_11q22.3	0.721	1
Amp_Xp21.1	Del_4q28.2	0.721	1
MED12	Del_8p23.2	0.722	1
L1CAM	Del_8p23.2	0.722	1
18p-Del	Del_13q14.13	0.722	1
Amp_3q26.2	Del_18q21.31	0.722	1
BHLHE22	TP53	0.723	1
BHLHE22	Del_17q21.31	0.723	1
KIDINS220	Del_17q21.31	0.723	1
NTM	7q-Amp	0.723	1
NTM	13q-Del	0.723	1
NTM	Del_1p31.3	0.723	1
NTM	Del_11q23.2	0.723	1
OR4D5	7q-Amp	0.723	1
OR4D5	13q-Del	0.723	1
OR4D5	Del_1p31.3	0.723	1
OR4D5	Del_11q23.2	0.723	1
TP53	ERN1	0.723	1
TP53	FAM120B	0.723	1
TP53	GAGE2D	0.723	1
TP53	MYOT	0.723	1
TP53	POM121	0.723	1
BMP2K	7q-Amp	0.723	1
BMP2K	13q-Del	0.723	1
BMP2K	Del_1p31.3	0.723	1
CNTNAP1	7q-Amp	0.723	1
CNTNAP1	13q-Del	0.723	1
CNTNAP1	Del_1p31.3	0.723	1
EDC4	Del_17q21.31	0.723	1
ERN1	Del_17q21.31	0.723	1
GAGE2D	Del_17q21.31	0.723	1
MED15	7q-Amp	0.723	1
MED15	13q-Del	0.723	1
MED15	Del_1p31.3	0.723	1
MED15	Del_11q23.2	0.723	1
MYOT	Del_17q21.31	0.723	1
POM121	Del_17q21.31	0.723	1
RPTN	7q-Amp	0.723	1
RPTN	13q-Del	0.723	1
RPTN	Del_1p31.3	0.723	1
RPTN	Del_11q23.2	0.723	1
TNRC18	7q-Amp	0.723	1
TNRC18	Del_11q23.2	0.723	1
3p-Amp	Del_1p31.3	0.723	1
3p-Amp	Del_11q23.2	0.723	1
7q-Amp	Amp_15q11.2	0.723	1
10q-Del	Del_11q23.2	0.723	1
13q-Del	Amp_15q11.2	0.723	1
8q-Del	Del_11q23.2	0.723	1
Xp-Del	Del_1p31.3	0.723	1
Xq-Del	Del_1p31.3	0.723	1
Amp_15q11.2	Del_1p31.3	0.723	1
Amp_20q13.2	Del_1p31.3	0.723	1
Amp_20q13.2	Del_11q23.2	0.723	1
Del_9p23	Del_17q21.31	0.723	1
Del_17q21.31	Del_19q13.2	0.723	1
CTNNB1	Amp_11q13.2	0.724	1
Amp_3q21.3	Del_10q23.31	0.724	1
BRAF	Del_18q21.31	0.725	1
FOXA1	Del_15q21.3	0.725	1
HRAS	7p-Amp	0.725	1
IDH1	7p-Amp	0.725	1
LMOD2	7p-Amp	0.725	1
OR4P4	7p-Amp	0.725	1
CDKN1B	7p-Amp	0.725	1
CR1L	7p-Amp	0.725	1
KIRREL	7p-Amp	0.725	1
ZNF709	7p-Amp	0.725	1
7p-Amp	10p-Del	0.725	1
7p-Amp	22q-Del	0.725	1
7p-Amp	Amp_Xq21.1	0.725	1
7p-Amp	Amp_Xq25	0.725	1
Amp_Xq27.1	Del_18q21.31	0.725	1
SPOP	Amp_8q24.21	0.726	1
BMP2K	Del_13q22.1	0.726	1
MED15	Del_13q22.1	0.726	1
TNRC18	Del_13q22.1	0.726	1
8q-Amp	Del_12p13.1	0.726	1
Amp_15q11.2	Del_13q22.1	0.726	1
Del_2q22.3	Del_11q23.2	0.726	1
APC	Del_16q22.3	0.727	1
EMG1	Del_13q14.13	0.727	1
EPB41L3	TP53	0.727	1
KDM6A	Del_16q22.3	0.727	1
LILRB5	Del_16q22.3	0.727	1
NKX3-1	Del_13q14.13	0.727	1
RPL11	Del_13q14.13	0.727	1
TP53	6q-Del	0.727	1
ESCO1	Del_13q14.13	0.727	1
Del_11q23.2	Del_17p13.1	0.727	1
EPB41L3	ZFHX3	0.728	1
EPB41L3	Del_6p25.1	0.728	1
GRIA1	ZFHX3	0.728	1
CDKN1B	Del_16q22.3	0.728	1
CR1L	Del_16q22.3	0.728	1
FAM111A	Del_2q22.1	0.728	1
FAM120B	Del_2q22.1	0.728	1
GAGE2D	Del_2q22.1	0.728	1
POM121	Del_2q22.1	0.728	1
Amp_17q23.2	Del_16q22.3	0.728	1
GRIA1	8p-Del	0.729	1
BRAF	Del_11p11.2	0.731	1
Amp_12q23.1	Del_11p11.2	0.731	1
Amp_Xp22.11	Del_11p11.2	0.731	1
Amp_Xq27.1	Del_11p11.2	0.731	1
APC	Del_17p13.1	0.733	1
BRAF	Del_18q23	0.733	1
HRAS	Del_17p13.1	0.733	1
KDM6A	Del_17p13.1	0.733	1
LMOD2	Del_17p13.1	0.733	1
RAG1	Del_17p13.1	0.733	1
SALL1	Del_17p13.1	0.733	1
EHHADH	Del_17p13.1	0.733	1
KIRREL	Del_17p13.1	0.733	1
10p-Del	Del_17p13.1	0.733	1
Amp_12q23.1	Del_18q23	0.733	1
Amp_14q21.1	Del_17p13.1	0.733	1
Amp_Xq21.1	Del_17p13.1	0.733	1
Amp_Xq27.1	Del_18q23	0.733	1
Del_1p22.1	Del_21q22.3	0.733	1
ANO4	8p-Amp	0.734	1
ANO4	12p-Del	0.734	1
ANO4	Del_9p23	0.734	1
ANO4	Del_15q21.3	0.734	1
BHLHE22	8q-Amp	0.734	1
KIDINS220	8q-Amp	0.734	1
MED12	8p-Amp	0.734	1
MED12	Del_9p23	0.734	1
MED12	Del_15q21.3	0.734	1
MED12	Del_19q13.2	0.734	1
NTM	Amp_3q26.2	0.734	1
NTM	Amp_8p11.23	0.734	1
OR4D5	18p-Del	0.734	1
OR4D5	Amp_3q26.2	0.734	1
OR4D5	Amp_8p11.23	0.734	1
BMP2K	18p-Del	0.734	1
BMP2K	Amp_3q26.2	0.734	1
BMP2K	Amp_8p11.23	0.734	1
CNTNAP1	18p-Del	0.734	1
ERN1	8q-Amp	0.734	1
FAM111A	8q-Amp	0.734	1
GAGE2D	8q-Amp	0.734	1
L1CAM	8p-Amp	0.734	1
L1CAM	12p-Del	0.734	1
L1CAM	Del_9p23	0.734	1
L1CAM	Del_15q21.3	0.734	1
LAMA3	12p-Del	0.734	1
LAMA3	Del_19q13.2	0.734	1
MED15	Amp_8p11.23	0.734	1
MYOT	8q-Amp	0.734	1
POM121	8q-Amp	0.734	1
RPTN	18p-Del	0.734	1
RPTN	Amp_8p11.23	0.734	1
SMG7	Del_15q21.3	0.734	1
SMG7	Del_19q13.2	0.734	1
TNRC18	18p-Del	0.734	1
TNRC18	Amp_3q26.2	0.734	1
TNRC18	Amp_8p11.23	0.734	1
TP53BP1	12p-Del	0.734	1
TP53BP1	Del_19q13.2	0.734	1
3p-Amp	18p-Del	0.734	1
8p-Amp	Amp_Xp21.1	0.734	1
10q-Del	18p-Del	0.734	1
10q-Del	Amp_3q26.2	0.734	1
10q-Del	Amp_8p11.23	0.734	1
12p-Del	Amp_4q13.3	0.734	1
12p-Del	Amp_Xp21.1	0.734	1
18p-Del	Xp-Del	0.734	1
18p-Del	Xq-Del	0.734	1
18p-Del	Amp_13q12.11	0.734	1
18p-Del	Amp_15q11.2	0.734	1
18p-Del	Amp_20q13.2	0.734	1
8q-Del	Amp_3q26.2	0.734	1
8q-Del	Amp_8p11.23	0.734	1
Xp-Del	Amp_3q26.2	0.734	1
Xq-Del	Amp_3q26.2	0.734	1
Amp_3q26.2	Del_18q23	0.734	1
Amp_4q13.3	Del_15q21.3	0.734	1
Amp_4q13.3	Del_19q13.2	0.734	1
Amp_Xp21.1	Del_9p23	0.734	1
Amp_Xp21.1	Del_15q21.3	0.734	1
APC	PTEN	0.735	1
HRAS	MUC17	0.735	1
HRAS	Amp_7p14.3	0.735	1
IDH1	MUC17	0.735	1
IDH1	Amp_7p14.3	0.735	1
LILRB5	PTEN	0.735	1
LMOD2	MUC17	0.735	1
MUC17	OR4P4	0.735	1
MUC17	CDKN1B	0.735	1
MUC17	CR1L	0.735	1
MUC17	KIRREL	0.735	1
MUC17	1q-Amp	0.735	1
MUC17	10p-Del	0.735	1
MUC17	Amp_Xq21.1	0.735	1
OR4P4	Amp_7p14.3	0.735	1
PTEN	SALL1	0.735	1
PTEN	FAM47C	0.735	1
PTEN	Amp_16q11.2	0.735	1
CDKN1B	Amp_7p14.3	0.735	1
CR1L	Amp_7p14.3	0.735	1
KIRREL	Amp_7p14.3	0.735	1
ZNF709	Amp_7p14.3	0.735	1
10p-Del	Amp_7p14.3	0.735	1
Amp_7p14.3	Amp_Xq21.1	0.735	1
Amp_7p14.3	Amp_Xq25	0.735	1
Del_1p22.1	Del_8p23.2	0.735	1
ATM	Del_1p31.3	0.738	1
ATM	Del_11q23.2	0.738	1
SPOP	Del_1q42.3	0.738	1
18q-Del	Del_5q21.1	0.738	1
Amp_Xp22.11	Del_6q14.3	0.738	1
Del_1p31.3	Del_4q28.2	0.738	1
Del_1p31.3	Del_11q22.3	0.738	1
7q-Amp	18q-Del	0.741	1
Amp_Xp22.11	Del_5q11.2	0.741	1
KDM6A	SPOP	0.742	1
RAG1	SPOP	0.742	1
SPOP	FAM47C	0.742	1
SPOP	Amp_14q21.1	0.742	1
SPOP	Amp_16q11.2	0.742	1
7p-Amp	Del_17p13.1	0.742	1
12p-Del	Amp_7q22.1	0.742	1
Amp_7q22.1	Del_19q13.2	0.742	1
ANO4	Del_13q14.13	0.743	1
SMG7	Del_13q14.13	0.743	1
8p-Del	Amp_3q21.3	0.743	1
8p-Del	Del_11q22.3	0.743	1
Amp_Xp21.1	Del_13q14.13	0.743	1
COL11A1	CTNNB1	0.744	1
COL11A1	Amp_1q22	0.744	1
CTNNB1	3q-Amp	0.744	1
FOXA1	HRAS	0.744	1
FOXA1	LMOD2	0.744	1
FOXA1	OR4P4	0.744	1
FOXA1	CDKN1B	0.744	1
FOXA1	CR1L	0.744	1
FOXA1	EHHADH	0.744	1
FOXA1	KIRREL	0.744	1
FOXA1	ZNF709	0.744	1
FOXA1	1q-Amp	0.744	1
FOXA1	22q-Del	0.744	1
FOXA1	Amp_Xq21.1	0.744	1
FOXA1	Amp_Xq25	0.744	1
HRAS	17p-Del	0.744	1
HRAS	Del_1q42.3	0.744	1
IDH1	17p-Del	0.744	1
IDH1	Del_1q42.3	0.744	1
LMOD2	17p-Del	0.744	1
LMOD2	Del_1q42.3	0.744	1
PIK3CA	3q-Amp	0.744	1
CDKN1B	17p-Del	0.744	1
EHHADH	17p-Del	0.744	1
EHHADH	Del_1q42.3	0.744	1
ZNF709	17p-Del	0.744	1
ZNF709	Del_1q42.3	0.744	1
1q-Amp	17p-Del	0.744	1
Amp_17q23.2	Del_1q42.3	0.744	1
Amp_Xq21.1	Del_1q42.3	0.744	1
Amp_Xq25	Del_1q42.3	0.744	1
NTM	Del_1p22.1	0.745	1
NTM	Del_21q22.2	0.745	1
OR4D5	Del_1p22.1	0.745	1
OR4D5	Del_21q22.2	0.745	1
BMP2K	Del_1p22.1	0.745	1
CNTNAP1	Del_1p22.1	0.745	1
CNTNAP1	Del_21q22.2	0.745	1
MED15	Del_1p22.1	0.745	1
MED15	Del_21q22.2	0.745	1
RPTN	Del_1p22.1	0.745	1
RPTN	Del_21q22.2	0.745	1
TNRC18	Del_21q22.2	0.745	1
3p-Amp	Del_1p22.1	0.745	1
3p-Amp	Del_21q22.2	0.745	1
8q-Del	Del_1p22.1	0.745	1
Xp-Del	Del_21q22.2	0.745	1
Xq-Del	Del_21q22.2	0.745	1
Amp_13q12.11	Del_1p22.1	0.745	1
Amp_15q11.2	Del_1p22.1	0.745	1
Amp_15q11.2	Del_21q22.2	0.745	1
Amp_20q13.2	Del_21q22.2	0.745	1
BRAF	Amp_9q33.3	0.746	1
EPB41L3	8q-Amp	0.746	1
GRIA1	8q-Amp	0.746	1
GRIA1	Amp_11q13.2	0.746	1
9q-Amp	Del_12q24.32	0.746	1
6q-Del	Amp_11q13.2	0.746	1
Amp_Xq27.1	Del_12q24.32	0.746	1
HRAS	Del_8p21.3	0.747	1
LMOD2	Del_8p21.3	0.747	1
SLC27A4	Amp_8q24.21	0.747	1
CR1L	Del_8p21.3	0.747	1
EHHADH	Del_8p21.3	0.747	1
Amp_8q24.21	Del_10q23.31	0.747	1
Amp_Xq21.1	Del_8p21.3	0.747	1
Amp_Xq25	Del_8p21.3	0.747	1
8q-Amp	Del_15q21.3	0.748	1
18q-Del	Amp_11q13.2	0.748	1
Del_6q14.3	Del_17p13.1	0.748	1
COL11A1	16q-Del	0.749	1
CTNNB1	16q-Del	0.749	1
APC	ZFHX3	0.751	1
KDM6A	ZFHX3	0.751	1
KDM6A	Del_5q13.2	0.751	1
KDM6A	Del_6p25.1	0.751	1
LILRB5	ZFHX3	0.751	1
LILRB5	Del_6p25.1	0.751	1
RAG1	Del_5q13.2	0.751	1
RAG1	Del_6p25.1	0.751	1
SALL1	ZFHX3	0.751	1
SALL1	Del_3p13	0.751	1
SALL1	Del_6p25.1	0.751	1
ZMYM3	ZFHX3	0.751	1
ZMYM3	Del_6p25.1	0.751	1
FAM47C	ZFHX3	0.751	1
FAM47C	Del_3p13	0.751	1
FAM47C	Del_6p25.1	0.751	1
ZFHX3	Amp_16q11.2	0.751	1
Amp_14q21.1	Del_5q13.2	0.751	1
Amp_14q21.1	Del_6p25.1	0.751	1
Amp_16q11.2	Del_3p13	0.751	1
Amp_16q11.2	Del_6p25.1	0.751	1
FOXA1	Del_5q13.2	0.752	1
17p-Del	Del_3p13	0.752	1
Del_1q42.3	Del_3p13	0.752	1
Del_18q21.31	Del_21q22.2	0.752	1
ZFHX3	Del_8p23.2	0.753	1
HRAS	Amp_7q22.1	0.754	1
IDH1	Amp_7q22.1	0.754	1
LMOD2	Amp_7q22.1	0.754	1
MUC17	TP53	0.754	1
MUC17	Del_17q21.31	0.754	1
OR4P4	Amp_7q22.1	0.754	1
CDKN1B	Amp_7q22.1	0.754	1
CR1L	Amp_7q22.1	0.754	1
KIRREL	Amp_7q22.1	0.754	1
ZNF709	Amp_7q22.1	0.754	1
1q-Amp	Amp_7q22.1	0.754	1
10p-Del	Amp_7q22.1	0.754	1
22q-Del	Amp_7q22.1	0.754	1
Amp_7q22.1	Amp_Xq21.1	0.754	1
Amp_7q22.1	Amp_Xq25	0.754	1
Del_12q24.32	Del_13q22.1	0.755	1
ATM	NTM	0.756	1
ATM	OR4D5	0.756	1
ATM	BMP2K	0.756	1
ATM	CNTNAP1	0.756	1
ATM	MED15	0.756	1
ATM	RPTN	0.756	1
ATM	TNRC18	0.756	1
ATM	Amp_8p11.23	0.756	1
ATM	Amp_13q12.11	0.756	1
ATM	Amp_15q11.2	0.756	1
NTM	Amp_3q21.3	0.756	1
NTM	Del_4q28.2	0.756	1
NTM	Del_11q22.3	0.756	1
OR4D5	Amp_3q21.3	0.756	1
OR4D5	Del_11q22.3	0.756	1
BMP2K	Amp_3q21.3	0.756	1
BMP2K	Del_4q28.2	0.756	1
BMP2K	Del_11q22.3	0.756	1
CNTNAP1	Del_4q28.2	0.756	1
MED15	Del_11q22.3	0.756	1
RPTN	Del_11q22.3	0.756	1
TNRC18	Del_4q28.2	0.756	1
TNRC18	Del_11q22.3	0.756	1
3p-Amp	Del_11q22.3	0.756	1
10q-Del	Amp_3q21.3	0.756	1
10q-Del	Del_4q28.2	0.756	1
10q-Del	Del_11q22.3	0.756	1
18q-Del	Del_2q22.1	0.756	1
8q-Del	Amp_3q21.3	0.756	1
8q-Del	Del_4q28.2	0.756	1
8q-Del	Del_11q22.3	0.756	1
Xp-Del	Amp_3q21.3	0.756	1
Xq-Del	Amp_3q21.3	0.756	1
Amp_20q13.2	Del_4q28.2	0.756	1
Amp_20q13.2	Del_11q22.3	0.756	1
MED12	Amp_8q24.21	0.757	1
L1CAM	Amp_8q24.21	0.757	1
BHLHE22	16q-Del	0.758	1
KIDINS220	16q-Del	0.758	1
ERN1	16q-Del	0.758	1
FAM111A	16q-Del	0.758	1
FAM120B	16q-Del	0.758	1
GAGE2D	16q-Del	0.758	1
MYOT	16q-Del	0.758	1
POM121	16q-Del	0.758	1
7q-Amp	12p-Del	0.758	1
7q-Amp	Del_19q13.2	0.758	1
8p-Amp	Del_1p31.3	0.758	1
12p-Del	13q-Del	0.758	1
12p-Del	Del_1p31.3	0.758	1
Del_1p31.3	Del_9p23	0.758	1
Del_11q23.2	Del_15q21.3	0.758	1
SLC27A4	Del_5q21.1	0.759	1
SLC27A4	Del_18q21.31	0.759	1
ANO4	Del_11p11.2	0.76	1
CTNNB1	Del_16q24.1	0.76	1
MED12	Del_11p11.2	0.76	1
L1CAM	Del_11p11.2	0.76	1
SMG7	Del_11p11.2	0.76	1
TP53BP1	Del_11p11.2	0.76	1
Amp_Xp21.1	Del_11p11.2	0.76	1
Del_3p13	Del_11p11.2	0.76	1
BRAF	PTEN	0.761	1
GRIA1	Del_13q14.13	0.761	1
PTEN	9q-Amp	0.761	1
PTEN	Amp_12q23.1	0.761	1
PTEN	Amp_Xq27.1	0.761	1
HRAS	Del_10q23.31	0.762	1
IDH1	Del_10q23.31	0.762	1
LMOD2	Del_10q23.31	0.762	1
CDKN1B	Del_10q23.31	0.762	1
1q-Amp	Del_10q23.31	0.762	1
ANO4	Amp_8q22.1	0.763	1
EPB41L3	Del_13q22.1	0.763	1
GRIA1	Del_13q22.1	0.763	1
HRAS	7q-Amp	0.763	1
HRAS	13q-Del	0.763	1
HRAS	Del_11q23.2	0.763	1
IDH1	7q-Amp	0.763	1
IDH1	13q-Del	0.763	1
IDH1	Del_1p31.3	0.763	1
IDH1	Del_11q23.2	0.763	1
LMOD2	7q-Amp	0.763	1
LMOD2	13q-Del	0.763	1
LMOD2	Del_1p31.3	0.763	1
MED12	Amp_8q22.1	0.763	1
OR4P4	7q-Amp	0.763	1
OR4P4	13q-Del	0.763	1
OR4P4	Del_1p31.3	0.763	1
OR4P4	Del_11q23.2	0.763	1
SLC27A4	Del_18q23	0.763	1
CDKN1B	7q-Amp	0.763	1
CDKN1B	Del_1p31.3	0.763	1
CR1L	7q-Amp	0.763	1
CR1L	13q-Del	0.763	1
EHHADH	Del_1p31.3	0.763	1
EHHADH	Del_11q23.2	0.763	1
KIRREL	7q-Amp	0.763	1
KIRREL	13q-Del	0.763	1
KIRREL	Del_1p31.3	0.763	1
KIRREL	Del_11q23.2	0.763	1
L1CAM	Amp_8q22.1	0.763	1
ZNF709	7q-Amp	0.763	1
ZNF709	13q-Del	0.763	1
ZNF709	Del_1p31.3	0.763	1
ZNF709	Del_11q23.2	0.763	1
1q-Amp	13q-Del	0.763	1
1q-Amp	Del_1p31.3	0.763	1
7q-Amp	10p-Del	0.763	1
7q-Amp	22q-Del	0.763	1
7q-Amp	Amp_Xq21.1	0.763	1
7q-Amp	Amp_Xq25	0.763	1
10p-Del	13q-Del	0.763	1
13q-Del	22q-Del	0.763	1
13q-Del	Amp_Xq25	0.763	1
Amp_17q23.2	Del_1p31.3	0.763	1
Amp_17q23.2	Del_11q23.2	0.763	1
Amp_Xq21.1	Del_1p31.3	0.763	1
Amp_Xq21.1	Del_11q23.2	0.763	1
Amp_Xq25	Del_11q23.2	0.763	1
COL11A1	EPB41L3	0.765	1
COL11A1	GRIA1	0.765	1
COL11A1	6q-Del	0.765	1
CTNNB1	EPB41L3	0.765	1
CTNNB1	GRIA1	0.765	1
CTNNB1	6q-Del	0.765	1
EPB41L3	PIK3CA	0.765	1
EPB41L3	3q-Amp	0.765	1
EPB41L3	Amp_1q22	0.765	1
GRIA1	3q-Amp	0.765	1
GRIA1	Amp_1q22	0.765	1
6q-Del	Amp_1q22	0.765	1
Amp_9q33.3	Del_6q14.3	0.765	1
APC	TP53	0.767	1
APC	Del_17q21.31	0.767	1
KDM6A	TP53	0.767	1
LILRB5	TP53	0.767	1
SLC27A4	Del_5q11.2	0.767	1
TP53	Amp_16q11.2	0.767	1
FAM47C	Del_17q21.31	0.767	1
MLLT10	Del_16q24.1	0.767	1
Del_13q14.13	Del_21q22.2	0.767	1
LILRB5	Amp_11q13.2	0.768	1
NTM	8p-Amp	0.768	1
NTM	12p-Del	0.768	1
NTM	Del_19q13.2	0.768	1
OR4D5	12p-Del	0.768	1
OR4D5	Del_9p23	0.768	1
OR4D5	Del_19q13.2	0.768	1
RAG1	Amp_11q13.2	0.768	1
SALL1	Amp_11q13.2	0.768	1
ZMYM3	Amp_11q13.2	0.768	1
BMP2K	8p-Amp	0.768	1
BMP2K	Del_9p23	0.768	1
BMP2K	Del_15q21.3	0.768	1
CNTNAP1	12p-Del	0.768	1
CNTNAP1	Del_15q21.3	0.768	1
CNTNAP1	Del_19q13.2	0.768	1
FAM47C	Amp_11q13.2	0.768	1
MED15	8p-Amp	0.768	1
MED15	12p-Del	0.768	1
MED15	Del_9p23	0.768	1
MED15	Del_15q21.3	0.768	1
RPTN	8p-Amp	0.768	1
RPTN	12p-Del	0.768	1
RPTN	Del_9p23	0.768	1
RPTN	Del_15q21.3	0.768	1
RPTN	Del_19q13.2	0.768	1
TNRC18	12p-Del	0.768	1
TNRC18	Del_9p23	0.768	1
TNRC18	Del_15q21.3	0.768	1
TNRC18	Del_19q13.2	0.768	1
3p-Amp	12p-Del	0.768	1
3p-Amp	Del_15q21.3	0.768	1
3p-Amp	Del_19q13.2	0.768	1
8p-Amp	10q-Del	0.768	1
8p-Amp	8q-Del	0.768	1
8p-Amp	Amp_20q13.2	0.768	1
10q-Del	12p-Del	0.768	1
10q-Del	Del_15q21.3	0.768	1
10q-Del	Del_19q13.2	0.768	1
12p-Del	Amp_13q12.11	0.768	1
12p-Del	Amp_15q11.2	0.768	1
12p-Del	Amp_20q13.2	0.768	1
Xp-Del	Del_9p23	0.768	1
Xp-Del	Del_19q13.2	0.768	1
Xq-Del	Del_9p23	0.768	1
Xq-Del	Del_19q13.2	0.768	1
Amp_13q12.11	Del_9p23	0.768	1
Amp_13q12.11	Del_15q21.3	0.768	1
Amp_13q12.11	Del_19q13.2	0.768	1
Amp_15q11.2	Del_9p23	0.768	1
Amp_15q11.2	Del_19q13.2	0.768	1
Del_1p31.3	Del_12p13.1	0.768	1
CTNNB1	Del_2q22.3	0.769	1
3q-Amp	Del_2q22.3	0.769	1
17p-Del	Del_11p11.2	0.769	1
Amp_1q22	Del_2q22.3	0.769	1
Amp_8q24.21	Del_12p13.1	0.769	1
KIDINS220	Del_2q22.3	0.77	1
FAM111A	Del_2q22.3	0.77	1
FAM120B	Del_2q22.3	0.77	1
GAGE2D	Del_2q22.3	0.77	1
MYOT	Del_2q22.3	0.77	1
POM121	Del_2q22.3	0.77	1
ATM	16q-Del	0.771	1
ZMYM3	Del_10q23.31	0.771	1
FAM47C	Del_10q23.31	0.771	1
Amp_14q21.1	Del_10q23.31	0.771	1
OR4D5	Del_12p13.1	0.772	1
OR4P4	8p-Del	0.772	1
BMP2K	Del_12p13.1	0.772	1
EHHADH	8p-Del	0.772	1
KIRREL	8p-Del	0.772	1
TNRC18	Del_12p13.1	0.772	1
ZNF709	8p-Del	0.772	1
8p-Del	Amp_Xq25	0.772	1
Amp_13q12.11	Del_12p13.1	0.772	1
COL11A1	Del_12p13.1	0.773	1
CTNNB1	Del_12p13.1	0.773	1
HRAS	Amp_3q26.2	0.773	1
HRAS	Amp_8p11.23	0.773	1
IDH1	18p-Del	0.773	1
IDH1	Amp_3q26.2	0.773	1
IDH1	Amp_8p11.23	0.773	1
LMOD2	18p-Del	0.773	1
LMOD2	Amp_3q26.2	0.773	1
LMOD2	Amp_8p11.23	0.773	1
OR4P4	18p-Del	0.773	1
OR4P4	Amp_3q26.2	0.773	1
OR4P4	Amp_8p11.23	0.773	1
CDKN1B	18p-Del	0.773	1
CDKN1B	Amp_3q26.2	0.773	1
CDKN1B	Amp_8p11.23	0.773	1
CR1L	Amp_3q26.2	0.773	1
CR1L	Amp_8p11.23	0.773	1
EHHADH	18p-Del	0.773	1
EHHADH	Amp_3q26.2	0.773	1
EHHADH	Amp_8p11.23	0.773	1
KIRREL	Amp_3q26.2	0.773	1
KIRREL	Amp_8p11.23	0.773	1
ZNF709	18p-Del	0.773	1
ZNF709	Amp_3q26.2	0.773	1
ZNF709	Amp_8p11.23	0.773	1
1q-Amp	18p-Del	0.773	1
1q-Amp	Amp_3q26.2	0.773	1
10p-Del	18p-Del	0.773	1
10p-Del	Amp_3q26.2	0.773	1
10p-Del	Amp_8p11.23	0.773	1
18p-Del	Amp_17q23.2	0.773	1
18p-Del	Amp_Xq21.1	0.773	1
18p-Del	Amp_Xq25	0.773	1
Amp_3q26.2	Amp_Xq21.1	0.773	1
Amp_3q26.2	Amp_Xq25	0.773	1
Amp_8p11.23	Amp_Xq21.1	0.773	1
Amp_8p11.23	Amp_Xq25	0.773	1
Del_2q22.3	Del_21q22.2	0.773	1
Del_5q21.1	Del_6p25.1	0.773	1
Del_6p25.1	Del_18q21.31	0.773	1
ANO4	Del_12q24.32	0.774	1
EMG1	7p-Amp	0.774	1
LCE2D	7p-Amp	0.774	1
MED12	Amp_9q33.3	0.774	1
MED12	Del_12q24.32	0.774	1
NKX3-1	7p-Amp	0.774	1
RPL11	7p-Amp	0.774	1
ESCO1	7p-Amp	0.774	1
L1CAM	Del_12q24.32	0.774	1
LAMA3	Amp_9q33.3	0.774	1
LAMA3	Del_12q24.32	0.774	1
MLLT10	7p-Amp	0.774	1
SMG7	Amp_9q33.3	0.774	1
SMG7	Del_12q24.32	0.774	1
TCEB3	7p-Amp	0.774	1
TCERG1	7p-Amp	0.774	1
TP53BP1	Amp_9q33.3	0.774	1
TP53BP1	Del_12q24.32	0.774	1
Amp_4q13.3	Del_12q24.32	0.774	1
8p-Amp	Amp_3q26.2	0.775	1
12p-Del	Amp_3q26.2	0.775	1
Amp_3q26.2	Del_9p23	0.775	1
Amp_3q26.2	Del_19q13.2	0.775	1
Amp_8p11.23	Del_15q21.3	0.775	1
ANO4	Del_5q21.1	0.776	1
BHLHE22	18q-Del	0.776	1
BRAF	ZFHX3	0.776	1
BRAF	Del_6p25.1	0.776	1
KIDINS220	18q-Del	0.776	1
SALL1	Del_2q22.1	0.776	1
ERN1	18q-Del	0.776	1
FAM120B	18q-Del	0.776	1
FAM47C	Del_2q22.1	0.776	1
GAGE2D	18q-Del	0.776	1
LAMA3	Del_18q21.31	0.776	1
MYOT	18q-Del	0.776	1
POM121	18q-Del	0.776	1
SMG7	Del_18q21.31	0.776	1
ZFHX3	9q-Amp	0.776	1
ZFHX3	Amp_12q23.1	0.776	1
ZFHX3	Amp_Xp22.11	0.776	1
ZFHX3	Amp_Xq27.1	0.776	1
Amp_4q13.3	Del_5q21.1	0.776	1
Amp_12q23.1	Del_6p25.1	0.776	1
Amp_16q11.2	Del_2q22.1	0.776	1
Amp_Xp22.11	Del_6p25.1	0.776	1
Amp_Xp21.1	Del_18q21.31	0.776	1
Del_5q21.1	Del_18q23	0.776	1
LCE2D	Del_6q14.3	0.778	1
NKX3-1	Del_6q14.3	0.778	1
RPL11	Del_6q14.3	0.778	1
SMAD4	Del_6q14.3	0.778	1
MLLT10	Del_6q14.3	0.778	1
TCEB3	Del_6q14.3	0.778	1
TCERG1	Del_6q14.3	0.778	1
COL11A1	Del_6q14.3	0.779	1
CTNNB1	18q-Del	0.779	1
PIK3CA	Del_6q14.3	0.779	1
3q-Amp	18q-Del	0.779	1
Amp_1q22	Del_6q14.3	0.779	1
7p-Amp	Del_18q23	0.781	1
ANO4	Del_8p21.3	0.782	1
EMG1	MUC17	0.782	1
EMG1	Amp_7p14.3	0.782	1
LCE2D	Amp_7p14.3	0.782	1
MED12	Del_8p21.3	0.782	1
MUC17	NKX3-1	0.782	1
MUC17	SMAD4	0.782	1
MUC17	ESCO1	0.782	1
MUC17	MLLT10	0.782	1
MUC17	TCEB3	0.782	1
MUC17	TCERG1	0.782	1
NKX3-1	Amp_7p14.3	0.782	1
RPL11	Amp_7p14.3	0.782	1
SMAD4	Amp_7p14.3	0.782	1
ESCO1	Amp_7p14.3	0.782	1
L1CAM	Del_8p21.3	0.782	1
LAMA3	Del_8p21.3	0.782	1
MLLT10	Amp_7p14.3	0.782	1
TCEB3	Amp_7p14.3	0.782	1
TCERG1	Amp_7p14.3	0.782	1
Amp_8q24.21	Del_15q21.3	0.782	1
Amp_8q24.21	Del_19q13.2	0.782	1
Amp_Xp21.1	Del_8p21.3	0.782	1
Del_6p25.1	Del_18q23	0.782	1
Del_11p11.2	Del_17q21.31	0.782	1
Del_11q22.3	Del_18q21.31	0.782	1
GRIA1	16q-Del	0.783	1
HRAS	Del_1p22.1	0.783	1
HRAS	Del_21q22.2	0.783	1
IDH1	Del_1p22.1	0.783	1
IDH1	Del_21q22.2	0.783	1
LMOD2	Del_1p22.1	0.783	1
LMOD2	Del_21q22.2	0.783	1
OR4P4	Del_21q22.2	0.783	1
CDKN1B	Del_1p22.1	0.783	1
CDKN1B	Del_21q22.2	0.783	1
CR1L	Del_1p22.1	0.783	1
EHHADH	Del_1p22.1	0.783	1
EHHADH	Del_21q22.2	0.783	1
KIRREL	Del_1p22.1	0.783	1
LAMA3	Del_18q23	0.783	1
SMG7	Del_18q23	0.783	1
ZNF709	Del_1p22.1	0.783	1
1q-Amp	Del_1p22.1	0.783	1
1q-Amp	Del_21q22.2	0.783	1
10p-Del	Del_21q22.2	0.783	1
Amp_17q23.2	Del_21q22.2	0.783	1
Amp_Xq21.1	Del_1p22.1	0.783	1
Amp_Xq21.1	Del_21q22.2	0.783	1
Amp_Xq25	Del_21q22.2	0.783	1
EPB41L3	6q-Del	0.784	1
LILRB5	8q-Amp	0.784	1
RAG1	8q-Amp	0.784	1
Del_10q23.31	Del_11q23.2	0.784	1
SPOP	9q-Amp	0.785	1
SPOP	Amp_12q23.1	0.785	1
APC	COL11A1	0.786	1
APC	CTNNB1	0.786	1
APC	PIK3CA	0.786	1
APC	Amp_1q22	0.786	1
COL11A1	KDM6A	0.786	1
COL11A1	RAG1	0.786	1
COL11A1	SALL1	0.786	1
COL11A1	ZMYM3	0.786	1
COL11A1	FAM47C	0.786	1
COL11A1	Amp_14q21.1	0.786	1
COL11A1	Amp_16q11.2	0.786	1
CTNNB1	LILRB5	0.786	1
CTNNB1	RAG1	0.786	1
CTNNB1	ZMYM3	0.786	1
CTNNB1	FAM47C	0.786	1
CTNNB1	Amp_14q21.1	0.786	1
CTNNB1	Amp_16q11.2	0.786	1
KDM6A	PIK3CA	0.786	1
KDM6A	3q-Amp	0.786	1
KDM6A	Amp_1q22	0.786	1
LILRB5	PIK3CA	0.786	1
LILRB5	3q-Amp	0.786	1
LILRB5	Amp_1q22	0.786	1
NKX3-1	Del_21q22.3	0.786	1
PIK3CA	RAG1	0.786	1
PIK3CA	SALL1	0.786	1
PIK3CA	ZMYM3	0.786	1
PIK3CA	FAM47C	0.786	1
PIK3CA	Amp_14q21.1	0.786	1
RAG1	3q-Amp	0.786	1
RAG1	Amp_1q22	0.786	1
SALL1	3q-Amp	0.786	1
SALL1	Amp_1q22	0.786	1
ZMYM3	3q-Amp	0.786	1
ESCO1	Del_21q22.3	0.786	1
FAM47C	3q-Amp	0.786	1
FAM47C	Amp_1q22	0.786	1
TCEB3	Del_21q22.3	0.786	1
TCERG1	Del_21q22.3	0.786	1
18q-Del	Del_21q22.2	0.786	1
PTEN	LAMA3	0.787	1
PTEN	TP53BP1	0.787	1
TP53	Amp_8q24.21	0.788	1
Amp_8q22.1	Del_12p13.1	0.788	1
ANO4	Del_5q11.2	0.789	1
SMG7	Del_5q11.2	0.789	1
Amp_Xp21.1	Del_5q11.2	0.789	1
ATM	Del_4q28.2	0.79	1
ATM	Del_11q22.3	0.79	1
EMG1	FOXA1	0.79	1
EMG1	Del_1q42.3	0.79	1
FOXA1	LCE2D	0.79	1
FOXA1	NKX3-1	0.79	1
FOXA1	SMAD4	0.79	1
FOXA1	ESCO1	0.79	1
FOXA1	MLLT10	0.79	1
FOXA1	TCEB3	0.79	1
FOXA1	TCERG1	0.79	1
LCE2D	17p-Del	0.79	1
NKX3-1	17p-Del	0.79	1
NKX3-1	Del_1q42.3	0.79	1
RPL11	17p-Del	0.79	1
RPL11	Del_1q42.3	0.79	1
SMAD4	Del_1q42.3	0.79	1
ESCO1	17p-Del	0.79	1
ESCO1	Del_1q42.3	0.79	1
MLLT10	Del_1q42.3	0.79	1
TCEB3	Del_1q42.3	0.79	1
TCERG1	17p-Del	0.79	1
TCERG1	Del_1q42.3	0.79	1
BRAF	Amp_11q13.2	0.791	1
NTM	Del_11p11.2	0.791	1
OR4D5	Del_11p11.2	0.791	1
BMP2K	Del_11p11.2	0.791	1
CNTNAP1	Del_11p11.2	0.791	1
MED15	Del_11p11.2	0.791	1
RPTN	Del_11p11.2	0.791	1
TNRC18	Del_11p11.2	0.791	1
9q-Amp	Amp_11q13.2	0.791	1
8q-Del	Del_11p11.2	0.791	1
Amp_1q22	Del_21q22.3	0.791	1
Amp_9q33.3	Del_1q42.3	0.791	1
Amp_11q13.2	Amp_Xq27.1	0.791	1
Amp_15q11.2	Del_11p11.2	0.791	1
Del_1p22.1	Del_9p23	0.791	1
Del_15q21.3	Del_21q22.2	0.791	1
ANO4	Del_16q24.1	0.792	1
ATM	HRAS	0.792	1
ATM	IDH1	0.792	1
ATM	OR4P4	0.792	1
ATM	CR1L	0.792	1
ATM	KIRREL	0.792	1
ATM	ZNF709	0.792	1
ATM	Amp_17q23.2	0.792	1
ATM	Amp_Xq25	0.792	1
HRAS	Amp_3q21.3	0.792	1
HRAS	Del_4q28.2	0.792	1
HRAS	Del_11q22.3	0.792	1
IDH1	Amp_3q21.3	0.792	1
IDH1	Del_11q22.3	0.792	1
LMOD2	Amp_3q21.3	0.792	1
LMOD2	Del_4q28.2	0.792	1
MED12	Del_16q24.1	0.792	1
OR4P4	Amp_3q21.3	0.792	1
OR4P4	Del_4q28.2	0.792	1
OR4P4	Del_11q22.3	0.792	1
PTEN	Del_16q24.1	0.792	1
CDKN1B	Amp_3q21.3	0.792	1
CR1L	Amp_3q21.3	0.792	1
CR1L	Del_4q28.2	0.792	1
EHHADH	Amp_3q21.3	0.792	1
EHHADH	Del_4q28.2	0.792	1
EHHADH	Del_11q22.3	0.792	1
KIRREL	Amp_3q21.3	0.792	1
KIRREL	Del_4q28.2	0.792	1
KIRREL	Del_11q22.3	0.792	1
L1CAM	Del_16q24.1	0.792	1
LAMA3	Del_16q24.1	0.792	1
SMG7	Del_16q24.1	0.792	1
ZNF709	Amp_3q21.3	0.792	1
ZNF709	Del_4q28.2	0.792	1
ZNF709	Del_11q22.3	0.792	1
10p-Del	Amp_3q21.3	0.792	1
22q-Del	Del_4q28.2	0.792	1
Amp_3q21.3	Amp_17q23.2	0.792	1
Amp_3q21.3	Amp_Xq21.1	0.792	1
Amp_3q21.3	Amp_Xq25	0.792	1
Amp_3q21.3	Del_18q23	0.792	1
Amp_8q22.1	Del_15q21.3	0.792	1
Amp_17q23.2	Del_4q28.2	0.792	1
Amp_Xq21.1	Del_4q28.2	0.792	1
Amp_Xq21.1	Del_11q22.3	0.792	1
Amp_Xq25	Del_4q28.2	0.792	1
Amp_Xq25	Del_11q22.3	0.792	1
Del_11q22.3	Del_18q23	0.792	1
SLC27A4	SPOP	0.793	1
Amp_12q23.1	Del_3p13	0.793	1
Amp_Xp22.11	Del_3p13	0.793	1
Amp_Xq27.1	Del_5q13.2	0.793	1
IDH1	Del_13q22.1	0.795	1
ZNF709	Del_13q22.1	0.795	1
16q-Del	Del_9p23	0.795	1
Amp_Xq21.1	Del_13q22.1	0.795	1
Del_11p11.2	Del_17p13.1	0.795	1
Amp_3q21.3	Del_2q22.3	0.796	1
SLC27A4	Del_3p13	0.797	1
SLC27A4	Del_5q13.2	0.797	1
EMG1	Amp_7q22.1	0.798	1
LCE2D	Amp_7q22.1	0.798	1
NKX3-1	Amp_7q22.1	0.798	1
RPL11	Amp_7q22.1	0.798	1
ESCO1	Amp_7q22.1	0.798	1
MLLT10	Amp_7q22.1	0.798	1
TCEB3	Amp_7q22.1	0.798	1
TCERG1	Amp_7q22.1	0.798	1
Del_11p11.2	Del_11q23.2	0.798	1
Del_6q14.3	Del_15q21.3	0.799	1
MUC17	PTEN	0.8	1
ZFHX3	8p-Del	0.8	1
13q-Del	Del_5q13.2	0.8	1
Amp_7q22.1	Del_17q21.31	0.8	1
Del_3p13	Del_11q23.2	0.8	1
ANO4	ZFHX3	0.801	1
MED12	ZFHX3	0.801	1
MED12	Del_6p25.1	0.801	1
L1CAM	ZFHX3	0.801	1
LAMA3	ZFHX3	0.801	1
LAMA3	Del_6p25.1	0.801	1
SMG7	Del_6p25.1	0.801	1
ZFHX3	Amp_4q13.3	0.801	1
ZFHX3	Amp_Xp21.1	0.801	1
6q-Del	Del_2q22.3	0.801	1
Amp_4q13.3	Del_6p25.1	0.801	1
Amp_Xp21.1	Del_6p25.1	0.801	1
HRAS	8p-Amp	0.802	1
HRAS	12p-Del	0.802	1
HRAS	Del_19q13.2	0.802	1
IDH1	8p-Amp	0.802	1
IDH1	12p-Del	0.802	1
IDH1	Del_9p23	0.802	1
IDH1	Del_15q21.3	0.802	1
IDH1	Del_19q13.2	0.802	1
LMOD2	8p-Amp	0.802	1
LMOD2	12p-Del	0.802	1
LMOD2	Del_9p23	0.802	1
LMOD2	Del_15q21.3	0.802	1
LMOD2	Del_19q13.2	0.802	1
OR4P4	8p-Amp	0.802	1
OR4P4	12p-Del	0.802	1
OR4P4	Del_9p23	0.802	1
OR4P4	Del_15q21.3	0.802	1
OR4P4	Del_19q13.2	0.802	1
CDKN1B	8p-Amp	0.802	1
CDKN1B	Del_9p23	0.802	1
CDKN1B	Del_19q13.2	0.802	1
CR1L	Del_19q13.2	0.802	1
EHHADH	8p-Amp	0.802	1
EHHADH	Del_9p23	0.802	1
EHHADH	Del_19q13.2	0.802	1
KIRREL	8p-Amp	0.802	1
KIRREL	Del_15q21.3	0.802	1
KIRREL	Del_19q13.2	0.802	1
ZNF709	8p-Amp	0.802	1
ZNF709	12p-Del	0.802	1
ZNF709	Del_9p23	0.802	1
ZNF709	Del_15q21.3	0.802	1
ZNF709	Del_19q13.2	0.802	1
1q-Amp	12p-Del	0.802	1
1q-Amp	Del_15q21.3	0.802	1
1q-Amp	Del_19q13.2	0.802	1
8p-Amp	10p-Del	0.802	1
8p-Amp	22q-Del	0.802	1
8p-Amp	Amp_17q23.2	0.802	1
8p-Amp	Amp_Xq21.1	0.802	1
8p-Amp	Amp_Xq25	0.802	1
10p-Del	Del_9p23	0.802	1
10p-Del	Del_15q21.3	0.802	1
10p-Del	Del_19q13.2	0.802	1
12p-Del	Amp_17q23.2	0.802	1
12p-Del	Amp_Xq21.1	0.802	1
Amp_Xq21.1	Del_15q21.3	0.802	1
Amp_Xq21.1	Del_19q13.2	0.802	1
Amp_Xq25	Del_9p23	0.802	1
Amp_Xq25	Del_15q21.3	0.802	1
APC	GRIA1	0.803	1
EPB41L3	KDM6A	0.803	1
EPB41L3	LILRB5	0.803	1
EPB41L3	SALL1	0.803	1
EPB41L3	ZMYM3	0.803	1
EPB41L3	FAM47C	0.803	1
GRIA1	KDM6A	0.803	1
GRIA1	LILRB5	0.803	1
GRIA1	RAG1	0.803	1
GRIA1	ZMYM3	0.803	1
GRIA1	FAM47C	0.803	1
GRIA1	Amp_14q21.1	0.803	1
GRIA1	Amp_16q11.2	0.803	1
LILRB5	6q-Del	0.803	1
NTM	Amp_9q33.3	0.803	1
OR4D5	Amp_9q33.3	0.803	1
OR4D5	Del_12q24.32	0.803	1
RAG1	6q-Del	0.803	1
SALL1	6q-Del	0.803	1
TP53	Amp_8q22.1	0.803	1
ZMYM3	6q-Del	0.803	1
BMP2K	Amp_9q33.3	0.803	1
BMP2K	Del_12q24.32	0.803	1
CNTNAP1	Del_12q24.32	0.803	1
FAM47C	6q-Del	0.803	1
MED15	Amp_9q33.3	0.803	1
MED15	Del_12q24.32	0.803	1
RPTN	Amp_9q33.3	0.803	1
RPTN	Del_12q24.32	0.803	1
TNRC18	Amp_9q33.3	0.803	1
TNRC18	Del_12q24.32	0.803	1
10q-Del	Amp_9q33.3	0.803	1
6q-Del	Amp_14q21.1	0.803	1
6q-Del	Amp_16q11.2	0.803	1
8q-Del	Amp_9q33.3	0.803	1
8q-Del	Del_12q24.32	0.803	1
Xp-Del	Del_12q24.32	0.803	1
Xq-Del	Del_12q24.32	0.803	1
Amp_13q12.11	Del_12q24.32	0.803	1
Amp_15q11.2	Del_12q24.32	0.803	1
Del_2q22.1	Del_8p23.2	0.803	1
LILRB5	Del_8p23.2	0.804	1
BMP2K	Del_8p23.2	0.805	1
TNRC18	Del_8p23.2	0.805	1
3p-Amp	Del_8p23.2	0.805	1
10q-Del	Del_8p23.2	0.805	1
Xp-Del	Del_8p23.2	0.805	1
Xq-Del	Del_8p23.2	0.805	1
Amp_7p14.3	Del_18q23	0.805	1
Amp_13q12.11	Del_8p23.2	0.805	1
ANO4	Del_6q14.3	0.806	1
EMG1	7q-Amp	0.806	1
EMG1	13q-Del	0.806	1
EMG1	Del_11q23.2	0.806	1
LCE2D	7q-Amp	0.806	1
LCE2D	Del_11q23.2	0.806	1
NKX3-1	7q-Amp	0.806	1
NKX3-1	13q-Del	0.806	1
NKX3-1	Del_11q23.2	0.806	1
RPL11	7q-Amp	0.806	1
RPL11	13q-Del	0.806	1
RPL11	Del_11q23.2	0.806	1
SLC27A4	TP53	0.806	1
SMAD4	Del_1p31.3	0.806	1
ESCO1	7q-Amp	0.806	1
ESCO1	13q-Del	0.806	1
ESCO1	Del_1p31.3	0.806	1
ESCO1	Del_11q23.2	0.806	1
MLLT10	7q-Amp	0.806	1
MLLT10	13q-Del	0.806	1
MLLT10	Del_1p31.3	0.806	1
TCEB3	7q-Amp	0.806	1
TCEB3	13q-Del	0.806	1
TCEB3	Del_1p31.3	0.806	1
TCEB3	Del_11q23.2	0.806	1
TCERG1	7q-Amp	0.806	1
TCERG1	13q-Del	0.806	1
TCERG1	Del_1p31.3	0.806	1
TP53BP1	Del_6q14.3	0.806	1
Amp_Xp21.1	Del_6q14.3	0.806	1
ATM	8p-Amp	0.807	1
ATM	Del_19q13.2	0.807	1
BRAF	COL11A1	0.807	1
BRAF	CTNNB1	0.807	1
BRAF	PIK3CA	0.807	1
BRAF	TP53	0.807	1
BRAF	3q-Amp	0.807	1
BRAF	Amp_1q22	0.807	1
COL11A1	Amp_12q23.1	0.807	1
COL11A1	Amp_Xp22.11	0.807	1
COL11A1	Amp_Xq27.1	0.807	1
CTNNB1	9q-Amp	0.807	1
CTNNB1	Amp_12q23.1	0.807	1
CTNNB1	Amp_Xq27.1	0.807	1
PIK3CA	9q-Amp	0.807	1
PIK3CA	Amp_12q23.1	0.807	1
PIK3CA	Amp_Xq27.1	0.807	1
TP53	Amp_12q23.1	0.807	1
TP53	Amp_Xp22.11	0.807	1
3q-Amp	9q-Amp	0.807	1
3q-Amp	Amp_12q23.1	0.807	1
9q-Amp	Amp_1q22	0.807	1
12p-Del	Amp_3q21.3	0.807	1
Amp_1q22	Amp_Xq27.1	0.807	1
Amp_3q21.3	Del_9p23	0.807	1
Del_4q28.2	Del_15q21.3	0.807	1
Del_11q22.3	Del_19q13.2	0.807	1
13q-Del	Del_21q22.3	0.808	1
18q-Del	Amp_3q21.3	0.808	1
18q-Del	Del_11q22.3	0.808	1
TP53	Del_12q24.32	0.809	1
Amp_9q33.3	Del_17q21.31	0.809	1
Amp_11q13.2	Del_18q21.31	0.809	1
GRIA1	18q-Del	0.81	1
OR4D5	Amp_8q24.21	0.81	1
RAG1	Del_8p21.3	0.81	1
SLC27A4	Del_2q22.1	0.81	1
ZMYM3	Del_8p21.3	0.81	1
RPTN	Amp_8q24.21	0.81	1
TNRC18	Amp_8q24.21	0.81	1
12p-Del	Del_18q21.31	0.811	1
Del_5q21.1	Del_19q13.2	0.811	1
SALL1	Del_13q22.1	0.812	1
EMG1	Del_16q22.3	0.813	1
FOXA1	PTEN	0.813	1
SPOP	Amp_8p11.23	0.813	1
TCEB3	Del_16q22.3	0.813	1
Del_5q21.1	Del_16q22.3	0.813	1
BRAF	Del_2q22.1	0.814	1
EMG1	Amp_3q26.2	0.814	1
EMG1	Amp_8p11.23	0.814	1
LCE2D	18p-Del	0.814	1
LCE2D	Amp_3q26.2	0.814	1
LCE2D	Amp_8p11.23	0.814	1
NKX3-1	18p-Del	0.814	1
NKX3-1	Amp_3q26.2	0.814	1
RPL11	18p-Del	0.814	1
RPL11	Amp_3q26.2	0.814	1
RPL11	Amp_8p11.23	0.814	1
SLC27A4	8q-Amp	0.814	1
SMAD4	18p-Del	0.814	1
SMAD4	Amp_3q26.2	0.814	1
ESCO1	18p-Del	0.814	1
ESCO1	Amp_3q26.2	0.814	1
ESCO1	Amp_8p11.23	0.814	1
MLLT10	Amp_3q26.2	0.814	1
MLLT10	Amp_8p11.23	0.814	1
TCEB3	18p-Del	0.814	1
TCEB3	Amp_3q26.2	0.814	1
TCEB3	Amp_8p11.23	0.814	1
TCERG1	Amp_3q26.2	0.814	1
TCERG1	Amp_8p11.23	0.814	1
ANO4	Amp_11q13.2	0.815	1
ANO4	Del_21q22.3	0.815	1
MED12	Amp_11q13.2	0.815	1
NTM	PTEN	0.815	1
OR4D5	PTEN	0.815	1
PTEN	BMP2K	0.815	1
PTEN	CNTNAP1	0.815	1
PTEN	MED15	0.815	1
PTEN	RPTN	0.815	1
PTEN	3p-Amp	0.815	1
PTEN	8q-Del	0.815	1
PTEN	Xp-Del	0.815	1
PTEN	Xq-Del	0.815	1
PTEN	Amp_13q12.11	0.815	1
PTEN	Amp_15q11.2	0.815	1
PTEN	Amp_20q13.2	0.815	1
L1CAM	Amp_11q13.2	0.815	1
APC	16q-Del	0.816	1
KDM6A	16q-Del	0.816	1
LCE2D	Del_17p13.1	0.816	1
LILRB5	16q-Del	0.816	1
NKX3-1	Del_17p13.1	0.816	1
OR4D5	Amp_8q22.1	0.816	1
CNTNAP1	Amp_8q22.1	0.816	1
MLLT10	Del_17p13.1	0.816	1
RPTN	Amp_8q22.1	0.816	1
TCERG1	Del_17p13.1	0.816	1
TNRC18	Amp_8q22.1	0.816	1
6q-Del	Del_12p13.1	0.816	1
TP53	Del_13q14.13	0.817	1
Amp_11q13.2	Del_18q23	0.817	1
13q-Del	Del_12q24.32	0.818	1
Amp_9q33.3	Del_11q23.2	0.818	1
Del_2q22.3	Del_19q13.2	0.818	1
Del_11q23.2	Del_12q24.32	0.818	1
Amp_9q33.3	Del_2q22.1	0.819	1
TP53	Del_13q22.1	0.82	1
12p-Del	Del_18q23	0.82	1
Del_13q22.1	Del_17q21.31	0.82	1
APC	KDM6A	0.821	1
APC	LILRB5	0.821	1
APC	SALL1	0.821	1
APC	ZMYM3	0.821	1
APC	FAM47C	0.821	1
APC	Amp_14q21.1	0.821	1
APC	Amp_16q11.2	0.821	1
BRAF	8q-Amp	0.821	1
KDM6A	LILRB5	0.821	1
KDM6A	RAG1	0.821	1
KDM6A	SALL1	0.821	1
KDM6A	ZMYM3	0.821	1
KDM6A	FAM47C	0.821	1
KDM6A	Amp_14q21.1	0.821	1
KDM6A	Amp_16q11.2	0.821	1
LILRB5	RAG1	0.821	1
LILRB5	SALL1	0.821	1
LILRB5	ZMYM3	0.821	1
LILRB5	Amp_14q21.1	0.821	1
LILRB5	Amp_16q11.2	0.821	1
MUC17	Del_6q14.3	0.821	1
RAG1	SALL1	0.821	1
RAG1	ZMYM3	0.821	1
RAG1	FAM47C	0.821	1
RAG1	Amp_14q21.1	0.821	1
RAG1	Amp_16q11.2	0.821	1
SALL1	ZMYM3	0.821	1
SALL1	FAM47C	0.821	1
SALL1	Amp_14q21.1	0.821	1
SALL1	Amp_16q11.2	0.821	1
ZMYM3	FAM47C	0.821	1
ZMYM3	Amp_14q21.1	0.821	1
FAM47C	Amp_14q21.1	0.821	1
FAM47C	Amp_16q11.2	0.821	1
Del_9p23	Del_13q22.1	0.821	1
NKX3-1	Del_1p22.1	0.822	1
NKX3-1	Del_21q22.2	0.822	1
RPL11	Del_1p22.1	0.822	1
RPL11	Del_21q22.2	0.822	1
SMAD4	Del_1p22.1	0.822	1
SMAD4	Del_21q22.2	0.822	1
TP53	Del_1p31.3	0.822	1
ESCO1	Del_1p22.1	0.822	1
MLLT10	Del_1p22.1	0.822	1
TCEB3	Del_1p22.1	0.822	1
TCERG1	Del_1p22.1	0.822	1
7q-Amp	Del_17q21.31	0.822	1
13q-Del	Del_17q21.31	0.822	1
BRAF	EPB41L3	0.823	1
BRAF	GRIA1	0.823	1
BRAF	6q-Del	0.823	1
COL11A1	Amp_8q24.21	0.823	1
CTNNB1	Amp_8q24.21	0.823	1
EPB41L3	Amp_12q23.1	0.823	1
EPB41L3	Amp_Xq27.1	0.823	1
GRIA1	9q-Amp	0.823	1
GRIA1	Amp_12q23.1	0.823	1
GRIA1	Amp_Xp22.11	0.823	1
GRIA1	Amp_Xq27.1	0.823	1
HRAS	Del_11p11.2	0.823	1
IDH1	Del_11p11.2	0.823	1
LMOD2	Del_11p11.2	0.823	1
OR4P4	Del_11p11.2	0.823	1
CDKN1B	Del_11p11.2	0.823	1
CR1L	Del_11p11.2	0.823	1
EHHADH	Del_11p11.2	0.823	1
KIRREL	Del_11p11.2	0.823	1
ZNF709	Del_11p11.2	0.823	1
1q-Amp	Del_11p11.2	0.823	1
8p-Amp	12p-Del	0.823	1
8p-Amp	Del_9p23	0.823	1
8p-Amp	Del_15q21.3	0.823	1
8p-Amp	Del_19q13.2	0.823	1
12p-Del	Del_19q13.2	0.823	1
22q-Del	Del_11p11.2	0.823	1
6q-Del	Amp_12q23.1	0.823	1
6q-Del	Amp_Xp22.11	0.823	1
Amp_17q23.2	Del_11p11.2	0.823	1
Amp_Xq21.1	Del_11p11.2	0.823	1
Amp_Xq25	Del_11p11.2	0.823	1
9q-Amp	Del_10q23.31	0.824	1
Amp_11q13.2	Del_5q11.2	0.824	1
Amp_Xp22.11	Del_10q23.31	0.824	1
BHLHE22	Del_8p23.2	0.825	1
KIDINS220	7p-Amp	0.825	1
EDC4	7p-Amp	0.825	1
ERN1	7p-Amp	0.825	1
ERN1	Del_8p23.2	0.825	1
FAM111A	7p-Amp	0.825	1
FAM120B	7p-Amp	0.825	1
GAGE2D	7p-Amp	0.825	1
MYOT	7p-Amp	0.825	1
MYOT	Del_8p23.2	0.825	1
POM121	7p-Amp	0.825	1
Del_8p23.2	Del_19q13.2	0.825	1
NTM	ZFHX3	0.827	1
NTM	Del_5q21.1	0.827	1
NTM	Del_6p25.1	0.827	1
NTM	Del_18q21.31	0.827	1
OR4D5	ZFHX3	0.827	1
OR4D5	Del_6p25.1	0.827	1
SPOP	L1CAM	0.827	1
SPOP	LAMA3	0.827	1
SPOP	SMG7	0.827	1
SPOP	TP53BP1	0.827	1
BMP2K	ZFHX3	0.827	1
BMP2K	Del_6p25.1	0.827	1
CNTNAP1	ZFHX3	0.827	1
CNTNAP1	Del_5q21.1	0.827	1
CNTNAP1	Del_6p25.1	0.827	1
MED15	Del_5q21.1	0.827	1
MED15	Del_18q21.31	0.827	1
RPTN	Del_5q21.1	0.827	1
TNRC18	ZFHX3	0.827	1
TNRC18	Del_5q21.1	0.827	1
TNRC18	Del_6p25.1	0.827	1
ZFHX3	Xp-Del	0.827	1
ZFHX3	Xq-Del	0.827	1
ZFHX3	Amp_13q12.11	0.827	1
ZFHX3	Amp_20q13.2	0.827	1
Xp-Del	Del_6p25.1	0.827	1
Xp-Del	Del_18q21.31	0.827	1
Xq-Del	Del_6p25.1	0.827	1
Xq-Del	Del_18q21.31	0.827	1
Amp_13q12.11	Del_5q21.1	0.827	1
Amp_15q11.2	Del_6p25.1	0.827	1
Del_11p11.2	Del_21q22.2	0.827	1
8q-Amp	Del_12q24.32	0.828	1
ANO4	COL11A1	0.829	1
ANO4	CTNNB1	0.829	1
ANO4	PIK3CA	0.829	1
ANO4	3q-Amp	0.829	1
ANO4	Amp_1q22	0.829	1
COL11A1	MED12	0.829	1
COL11A1	LAMA3	0.829	1
COL11A1	SMG7	0.829	1
COL11A1	Amp_4q13.3	0.829	1
COL11A1	Amp_Xp21.1	0.829	1
CTNNB1	MED12	0.829	1
CTNNB1	L1CAM	0.829	1
CTNNB1	LAMA3	0.829	1
CTNNB1	SMG7	0.829	1
CTNNB1	TP53BP1	0.829	1
MED12	PIK3CA	0.829	1
MED12	3q-Amp	0.829	1
PIK3CA	L1CAM	0.829	1
PIK3CA	LAMA3	0.829	1
PIK3CA	SMG7	0.829	1
PIK3CA	TP53BP1	0.829	1
L1CAM	3q-Amp	0.829	1
L1CAM	Amp_1q22	0.829	1
LAMA3	3q-Amp	0.829	1
LAMA3	Amp_1q22	0.829	1
SMG7	3q-Amp	0.829	1
SMG7	Amp_1q22	0.829	1
TP53BP1	3q-Amp	0.829	1
Del_1q42.3	Del_16q24.1	0.829	1
ATM	EMG1	0.83	1
ATM	LCE2D	0.83	1
ATM	NKX3-1	0.83	1
ATM	RPL11	0.83	1
ATM	ESCO1	0.83	1
ATM	MLLT10	0.83	1
ATM	TCEB3	0.83	1
ATM	TCERG1	0.83	1
COL11A1	Amp_8q22.1	0.83	1
CTNNB1	Amp_8q22.1	0.83	1
EMG1	Amp_3q21.3	0.83	1
EMG1	Del_4q28.2	0.83	1
EMG1	Del_11q22.3	0.83	1
LCE2D	Amp_3q21.3	0.83	1
LCE2D	Del_4q28.2	0.83	1
LCE2D	Del_11q22.3	0.83	1
NKX3-1	Amp_3q21.3	0.83	1
NKX3-1	Del_4q28.2	0.83	1
NKX3-1	Del_11q22.3	0.83	1
RPL11	Amp_3q21.3	0.83	1
RPL11	Del_11q22.3	0.83	1
SMAD4	Amp_3q21.3	0.83	1
SMAD4	Del_4q28.2	0.83	1
ESCO1	Amp_3q21.3	0.83	1
ESCO1	Del_4q28.2	0.83	1
ESCO1	Del_11q22.3	0.83	1
MLLT10	Amp_3q21.3	0.83	1
MLLT10	Del_4q28.2	0.83	1
TCEB3	Amp_3q21.3	0.83	1
TCEB3	Del_4q28.2	0.83	1
TCEB3	Del_11q22.3	0.83	1
TCERG1	Amp_3q21.3	0.83	1
TCERG1	Del_4q28.2	0.83	1
TCERG1	Del_11q22.3	0.83	1
Del_17q21.31	Del_18q21.31	0.83	1
BHLHE22	MUC17	0.831	1
BHLHE22	Amp_7p14.3	0.831	1
CTNNB1	Del_16q22.3	0.831	1
KIDINS220	MUC17	0.831	1
KIDINS220	Amp_7p14.3	0.831	1
MUC17	EDC4	0.831	1
MUC17	ERN1	0.831	1
MUC17	FAM111A	0.831	1
MUC17	FAM120B	0.831	1
MUC17	GAGE2D	0.831	1
PIK3CA	Del_16q22.3	0.831	1
SLC27A4	16q-Del	0.831	1
EDC4	Amp_7p14.3	0.831	1
ERN1	Amp_7p14.3	0.831	1
FAM111A	Amp_7p14.3	0.831	1
FAM120B	Amp_7p14.3	0.831	1
GAGE2D	Amp_7p14.3	0.831	1
MYOT	Amp_7p14.3	0.831	1
POM121	Amp_7p14.3	0.831	1
8p-Del	Del_2q22.3	0.831	1
Amp_8p11.23	Del_12q24.32	0.831	1
NTM	Del_18q23	0.832	1
FAM47C	Del_2q22.3	0.832	1
KIRREL	Del_12p13.1	0.832	1
MED15	Del_18q23	0.832	1
22q-Del	Del_12p13.1	0.832	1
Amp_13q12.11	Del_18q23	0.832	1
Amp_20q13.2	Del_18q23	0.832	1
Amp_Xq21.1	Del_12p13.1	0.832	1
Amp_Xq25	Del_12p13.1	0.832	1
ANO4	Del_5q13.2	0.833	1
CTNNB1	Del_8p21.3	0.833	1
HRAS	Amp_9q33.3	0.833	1
HRAS	Del_12q24.32	0.833	1
IDH1	Amp_9q33.3	0.833	1
IDH1	Del_12q24.32	0.833	1
LMOD2	Amp_9q33.3	0.833	1
LMOD2	Del_12q24.32	0.833	1
OR4P4	Amp_9q33.3	0.833	1
CDKN1B	Amp_9q33.3	0.833	1
CDKN1B	Del_12q24.32	0.833	1
CR1L	Amp_9q33.3	0.833	1
CR1L	Del_12q24.32	0.833	1
EHHADH	Del_12q24.32	0.833	1
KIRREL	Amp_9q33.3	0.833	1
KIRREL	Del_12q24.32	0.833	1
LAMA3	Del_3p13	0.833	1
LAMA3	Del_5q13.2	0.833	1
SMG7	Del_5q13.2	0.833	1
TP53BP1	Del_3p13	0.833	1
ZNF709	Amp_9q33.3	0.833	1
ZNF709	Del_12q24.32	0.833	1
1q-Amp	Amp_9q33.3	0.833	1
10p-Del	Amp_9q33.3	0.833	1
22q-Del	Del_12q24.32	0.833	1
Amp_1q22	Del_8p21.3	0.833	1
Amp_4q13.3	Del_3p13	0.833	1
Amp_4q13.3	Del_5q13.2	0.833	1
Amp_9q33.3	Amp_Xq21.1	0.833	1
Amp_17q23.2	Del_12q24.32	0.833	1
Amp_Xp21.1	Del_3p13	0.833	1
Amp_Xq21.1	Del_12q24.32	0.833	1
Del_2q22.1	Del_11q23.2	0.833	1
FOXA1	Del_6p25.1	0.834	1
8p-Del	Amp_12q23.1	0.834	1
8p-Del	Amp_Xq27.1	0.834	1
Del_11q22.3	Del_17p13.1	0.835	1
BHLHE22	Del_13q14.13	0.836	1
KIDINS220	Del_13q14.13	0.836	1
MUC17	Del_1q42.3	0.836	1
PTEN	Del_17q21.31	0.836	1
ERN1	Del_13q14.13	0.836	1
FAM111A	Del_13q14.13	0.836	1
FAM120B	Del_13q14.13	0.836	1
MYOT	Del_13q14.13	0.836	1
NTM	Del_5q11.2	0.837	1
PTEN	Del_11q23.2	0.837	1
Amp_13q12.11	Del_5q11.2	0.837	1
BHLHE22	FOXA1	0.838	1
BHLHE22	17p-Del	0.838	1
BHLHE22	Del_1q42.3	0.838	1
EMG1	Del_10q23.31	0.838	1
FOXA1	KIDINS220	0.838	1
FOXA1	EDC4	0.838	1
FOXA1	ERN1	0.838	1
FOXA1	FAM111A	0.838	1
FOXA1	FAM120B	0.838	1
FOXA1	GAGE2D	0.838	1
FOXA1	MYOT	0.838	1
FOXA1	POM121	0.838	1
FOXA1	Del_5q11.2	0.838	1
KIDINS220	Del_1q42.3	0.838	1
NKX3-1	Del_10q23.31	0.838	1
RPL11	Del_10q23.31	0.838	1
SMAD4	Del_10q23.31	0.838	1
EDC4	Del_1q42.3	0.838	1
ERN1	17p-Del	0.838	1
FAM120B	17p-Del	0.838	1
FAM120B	Del_1q42.3	0.838	1
GAGE2D	17p-Del	0.838	1
GAGE2D	Del_1q42.3	0.838	1
MLLT10	Del_10q23.31	0.838	1
MYOT	17p-Del	0.838	1
POM121	17p-Del	0.838	1
POM121	Del_1q42.3	0.838	1
TCEB3	Del_10q23.31	0.838	1
EMG1	12p-Del	0.839	1
EMG1	Del_9p23	0.839	1
EMG1	Del_15q21.3	0.839	1
LCE2D	8p-Amp	0.839	1
LCE2D	12p-Del	0.839	1
LCE2D	Del_9p23	0.839	1
NKX3-1	8p-Amp	0.839	1
NKX3-1	12p-Del	0.839	1
NKX3-1	Del_15q21.3	0.839	1
NKX3-1	Del_19q13.2	0.839	1
NTM	Amp_11q13.2	0.839	1
OR4D5	Amp_11q13.2	0.839	1
RPL11	8p-Amp	0.839	1
RPL11	12p-Del	0.839	1
RPL11	Del_9p23	0.839	1
RPL11	Del_19q13.2	0.839	1
SMAD4	Del_19q13.2	0.839	1
SPOP	ZFHX3	0.839	1
BMP2K	Amp_11q13.2	0.839	1
ESCO1	8p-Amp	0.839	1
ESCO1	12p-Del	0.839	1
ESCO1	Del_9p23	0.839	1
ESCO1	Del_15q21.3	0.839	1
ESCO1	Del_19q13.2	0.839	1
MED15	Amp_11q13.2	0.839	1
MLLT10	8p-Amp	0.839	1
MLLT10	12p-Del	0.839	1
MLLT10	Del_9p23	0.839	1
MLLT10	Del_15q21.3	0.839	1
MLLT10	Del_19q13.2	0.839	1
RPTN	Amp_11q13.2	0.839	1
TCEB3	8p-Amp	0.839	1
TCEB3	Del_9p23	0.839	1
TCEB3	Del_15q21.3	0.839	1
TCEB3	Del_19q13.2	0.839	1
TCERG1	8p-Amp	0.839	1
TCERG1	12p-Del	0.839	1
TCERG1	Del_9p23	0.839	1
TCERG1	Del_15q21.3	0.839	1
TCERG1	Del_19q13.2	0.839	1
TNRC18	Amp_11q13.2	0.839	1
10q-Del	Amp_11q13.2	0.839	1
8q-Del	Amp_11q13.2	0.839	1
Del_12q24.32	Del_13q14.13	0.839	1
APC	BRAF	0.84	1
APC	Amp_Xp22.11	0.84	1
BRAF	KDM6A	0.84	1
BRAF	LILRB5	0.84	1
BRAF	SALL1	0.84	1
BRAF	FAM47C	0.84	1
BRAF	Amp_14q21.1	0.84	1
BRAF	Amp_16q11.2	0.84	1
KDM6A	9q-Amp	0.84	1
KDM6A	18q-Del	0.84	1
KDM6A	Amp_12q23.1	0.84	1
KDM6A	Amp_Xp22.11	0.84	1
LILRB5	18q-Del	0.84	1
LILRB5	Amp_12q23.1	0.84	1
LILRB5	Amp_Xp22.11	0.84	1
LILRB5	Amp_Xq27.1	0.84	1
RAG1	9q-Amp	0.84	1
RAG1	18q-Del	0.84	1
RAG1	Amp_12q23.1	0.84	1
RAG1	Amp_Xq27.1	0.84	1
SALL1	9q-Amp	0.84	1
SALL1	Amp_12q23.1	0.84	1
SALL1	Amp_Xp22.11	0.84	1
SALL1	Amp_Xq27.1	0.84	1
SLC27A4	Del_2q22.3	0.84	1
ZMYM3	9q-Amp	0.84	1
ZMYM3	Amp_12q23.1	0.84	1
ZMYM3	Amp_Xp22.11	0.84	1
ZMYM3	Amp_Xq27.1	0.84	1
FAM47C	9q-Amp	0.84	1
FAM47C	Amp_12q23.1	0.84	1
FAM47C	Amp_Xp22.11	0.84	1
9q-Amp	Amp_14q21.1	0.84	1
Amp_8q24.21	Del_18q23	0.84	1
Amp_14q21.1	Amp_Xq27.1	0.84	1
Amp_16q11.2	Amp_Xq27.1	0.84	1
Del_8p21.3	Del_19q13.2	0.84	1
ATM	Del_11p11.2	0.841	1
FOXA1	Del_8p23.2	0.841	1
GRIA1	Del_21q22.3	0.841	1
6q-Del	Del_21q22.3	0.841	1
Amp_7q22.1	Del_18q21.31	0.841	1
HRAS	PTEN	0.843	1
OR4P4	PTEN	0.843	1
PTEN	CDKN1B	0.843	1
PTEN	EHHADH	0.843	1
PTEN	KIRREL	0.843	1
PTEN	ZNF709	0.843	1
PTEN	1q-Amp	0.843	1
PTEN	10p-Del	0.843	1
PTEN	22q-Del	0.843	1
PTEN	Amp_17q23.2	0.843	1
PTEN	Amp_Xq21.1	0.843	1
PTEN	Amp_Xq25	0.843	1
18p-Del	Del_17q21.31	0.843	1
Amp_1q22	Del_5q21.1	0.843	1
Amp_1q22	Del_18q21.31	0.843	1
Del_17q21.31	Del_18q23	0.843	1
ANO4	EPB41L3	0.844	1
ANO4	GRIA1	0.844	1
BHLHE22	Amp_7q22.1	0.844	1
EPB41L3	MED12	0.844	1
EPB41L3	L1CAM	0.844	1
EPB41L3	TP53BP1	0.844	1
EPB41L3	Amp_4q13.3	0.844	1
GRIA1	MED12	0.844	1
GRIA1	L1CAM	0.844	1
GRIA1	LAMA3	0.844	1
GRIA1	SMG7	0.844	1
GRIA1	TP53BP1	0.844	1
GRIA1	Amp_4q13.3	0.844	1
GRIA1	Amp_Xp21.1	0.844	1
KIDINS220	Amp_7q22.1	0.844	1
MED12	6q-Del	0.844	1
MUC17	Amp_11q13.2	0.844	1
SLC27A4	18q-Del	0.844	1
EDC4	Amp_7q22.1	0.844	1
ERN1	Amp_7q22.1	0.844	1
FAM111A	Amp_7q22.1	0.844	1
FAM120B	Amp_7q22.1	0.844	1
GAGE2D	Amp_7q22.1	0.844	1
MYOT	Amp_7q22.1	0.844	1
POM121	Amp_7q22.1	0.844	1
SMG7	6q-Del	0.844	1
TP53BP1	6q-Del	0.844	1
6q-Del	Amp_Xp21.1	0.844	1
ANO4	Del_16q22.3	0.845	1
MED12	Del_16q22.3	0.845	1
SMAD4	8p-Del	0.845	1
ESCO1	8p-Del	0.845	1
L1CAM	Del_16q22.3	0.845	1
LAMA3	Del_16q22.3	0.845	1
ZFHX3	Amp_7q22.1	0.845	1
Amp_7q22.1	Del_6p25.1	0.845	1
TP53	LAMA3	0.846	1
TP53	SMG7	0.846	1
TP53	Amp_4q13.3	0.846	1
LAMA3	Del_17q21.31	0.846	1
SMG7	Del_17q21.31	0.846	1
Amp_Xp21.1	Del_17q21.31	0.846	1
MUC17	8p-Del	0.847	1
Del_3p13	Del_6p25.1	0.847	1
Del_5q13.2	Del_6p25.1	0.847	1
PTEN	18p-Del	0.849	1
PTEN	Amp_8p11.23	0.849	1
12p-Del	Del_13q14.13	0.849	1
16q-Del	Amp_12q23.1	0.849	1
16q-Del	Amp_Xp22.11	0.849	1
Amp_4q13.3	Del_17p13.1	0.849	1
Del_9p23	Del_13q14.13	0.849	1
CTNNB1	Del_18q23	0.85	1
FOXA1	Del_1q42.3	0.85	1
BHLHE22	7q-Amp	0.851	1
BHLHE22	Del_1p31.3	0.851	1
BHLHE22	Del_11q23.2	0.851	1
KIDINS220	7q-Amp	0.851	1
KIDINS220	13q-Del	0.851	1
KIDINS220	Del_1p31.3	0.851	1
KIDINS220	Del_11q23.2	0.851	1
EDC4	7q-Amp	0.851	1
EDC4	13q-Del	0.851	1
EDC4	Del_11q23.2	0.851	1
ERN1	7q-Amp	0.851	1
ERN1	13q-Del	0.851	1
ERN1	Del_1p31.3	0.851	1
ERN1	Del_11q23.2	0.851	1
FAM111A	7q-Amp	0.851	1
FAM111A	13q-Del	0.851	1
FAM111A	Del_1p31.3	0.851	1
FAM111A	Del_11q23.2	0.851	1
FAM120B	7q-Amp	0.851	1
FAM120B	13q-Del	0.851	1
FAM120B	Del_1p31.3	0.851	1
FAM120B	Del_11q23.2	0.851	1
GAGE2D	7q-Amp	0.851	1
GAGE2D	13q-Del	0.851	1
GAGE2D	Del_1p31.3	0.851	1
GAGE2D	Del_11q23.2	0.851	1
MYOT	7q-Amp	0.851	1
MYOT	13q-Del	0.851	1
MYOT	Del_1p31.3	0.851	1
MYOT	Del_11q23.2	0.851	1
POM121	7q-Amp	0.851	1
POM121	13q-Del	0.851	1
POM121	Del_1p31.3	0.851	1
POM121	Del_11q23.2	0.851	1
7p-Amp	18q-Del	0.851	1
COL11A1	NTM	0.852	1
COL11A1	BMP2K	0.852	1
COL11A1	CNTNAP1	0.852	1
COL11A1	MED15	0.852	1
COL11A1	RPTN	0.852	1
COL11A1	3p-Amp	0.852	1
COL11A1	10q-Del	0.852	1
COL11A1	8q-Del	0.852	1
COL11A1	Amp_13q12.11	0.852	1
COL11A1	Amp_20q13.2	0.852	1
CTNNB1	NTM	0.852	1
CTNNB1	OR4D5	0.852	1
CTNNB1	BMP2K	0.852	1
CTNNB1	CNTNAP1	0.852	1
CTNNB1	MED15	0.852	1
CTNNB1	TNRC18	0.852	1
CTNNB1	3p-Amp	0.852	1
CTNNB1	10q-Del	0.852	1
CTNNB1	8q-Del	0.852	1
CTNNB1	Xp-Del	0.852	1
CTNNB1	Xq-Del	0.852	1
CTNNB1	Amp_13q12.11	0.852	1
CTNNB1	Amp_15q11.2	0.852	1
CTNNB1	Amp_20q13.2	0.852	1
MED12	Del_2q22.1	0.852	1
NTM	PIK3CA	0.852	1
NTM	3q-Amp	0.852	1
OR4D5	PIK3CA	0.852	1
OR4D5	3q-Amp	0.852	1
PIK3CA	BMP2K	0.852	1
PIK3CA	CNTNAP1	0.852	1
PIK3CA	MED15	0.852	1
PIK3CA	3p-Amp	0.852	1
PIK3CA	10q-Del	0.852	1
PIK3CA	8q-Del	0.852	1
PIK3CA	Xp-Del	0.852	1
PIK3CA	Xq-Del	0.852	1
PIK3CA	Amp_13q12.11	0.852	1
PIK3CA	Amp_15q11.2	0.852	1
BMP2K	3q-Amp	0.852	1
BMP2K	Amp_1q22	0.852	1
CNTNAP1	3q-Amp	0.852	1
MED15	Amp_1q22	0.852	1
RPTN	Amp_1q22	0.852	1
SMG7	Del_2q22.1	0.852	1
TNRC18	3q-Amp	0.852	1
TNRC18	Amp_1q22	0.852	1
TP53BP1	Del_2q22.1	0.852	1
3q-Amp	10q-Del	0.852	1
3q-Amp	8q-Del	0.852	1
3q-Amp	Xp-Del	0.852	1
3q-Amp	Xq-Del	0.852	1
3q-Amp	Amp_13q12.11	0.852	1
3q-Amp	Amp_15q11.2	0.852	1
10q-Del	Amp_1q22	0.852	1
8q-Del	Amp_1q22	0.852	1
Xp-Del	Amp_1q22	0.852	1
Xq-Del	Amp_1q22	0.852	1
MUC17	Del_8p21.3	0.853	1
PTEN	8q-Amp	0.853	1
HRAS	ZFHX3	0.854	1
HRAS	Del_6p25.1	0.854	1
IDH1	ZFHX3	0.854	1
IDH1	Del_6p25.1	0.854	1
LMOD2	ZFHX3	0.854	1
LMOD2	Del_6p25.1	0.854	1
OR4P4	ZFHX3	0.854	1
OR4P4	Del_6p25.1	0.854	1
CDKN1B	ZFHX3	0.854	1
CR1L	ZFHX3	0.854	1
EHHADH	ZFHX3	0.854	1
EHHADH	Del_6p25.1	0.854	1
KIRREL	ZFHX3	0.854	1
KIRREL	Del_6p25.1	0.854	1
ZFHX3	ZNF709	0.854	1
ZFHX3	1q-Amp	0.854	1
ZFHX3	10p-Del	0.854	1
ZFHX3	22q-Del	0.854	1
ZFHX3	Amp_Xq25	0.854	1
ZNF709	Del_6p25.1	0.854	1
1q-Amp	Del_6p25.1	0.854	1
12p-Del	Del_11p11.2	0.854	1
Amp_Xq21.1	Del_6p25.1	0.854	1
Del_3p13	Del_13q14.13	0.854	1
Del_11p11.2	Del_15q21.3	0.854	1
MUC17	Del_2q22.3	0.855	1
Del_2q22.3	Del_17p13.1	0.855	1
APC	Del_12p13.1	0.856	1
BRAF	9q-Amp	0.856	1
BRAF	Amp_12q23.1	0.856	1
BRAF	Amp_Xq27.1	0.856	1
COL11A1	7p-Amp	0.856	1
CTNNB1	Del_5q11.2	0.856	1
EMG1	Del_11p11.2	0.856	1
LCE2D	Del_11p11.2	0.856	1
NKX3-1	Del_11p11.2	0.856	1
PIK3CA	7p-Amp	0.856	1
RPL11	Del_11p11.2	0.856	1
SALL1	Del_12p13.1	0.856	1
TP53	Del_5q11.2	0.856	1
ESCO1	Del_11p11.2	0.856	1
MLLT10	Del_11p11.2	0.856	1
TCEB3	Del_11p11.2	0.856	1
TCERG1	Del_11p11.2	0.856	1
ZFHX3	13q-Del	0.856	1
ZFHX3	Del_11q23.2	0.856	1
9q-Amp	Amp_12q23.1	0.856	1
Amp_12q23.1	Amp_Xp22.11	0.856	1
Amp_12q23.1	Amp_Xq27.1	0.856	1
Amp_14q21.1	Del_12p13.1	0.856	1
Amp_Xp22.11	Amp_Xq27.1	0.856	1
Del_5q11.2	Del_21q22.3	0.856	1
Del_6p25.1	Del_11q23.2	0.856	1
ATM	SPOP	0.857	1
BHLHE22	18p-Del	0.857	1
BHLHE22	Amp_3q26.2	0.857	1
BHLHE22	Amp_8p11.23	0.857	1
KIDINS220	18p-Del	0.857	1
KIDINS220	Amp_3q26.2	0.857	1
KIDINS220	Amp_8p11.23	0.857	1
MED12	8q-Amp	0.857	1
EDC4	Amp_3q26.2	0.857	1
EDC4	Amp_8p11.23	0.857	1
ERN1	18p-Del	0.857	1
ERN1	Amp_3q26.2	0.857	1
ERN1	Amp_8p11.23	0.857	1
FAM111A	Amp_3q26.2	0.857	1
FAM111A	Amp_8p11.23	0.857	1
FAM120B	18p-Del	0.857	1
FAM120B	Amp_3q26.2	0.857	1
GAGE2D	18p-Del	0.857	1
GAGE2D	Amp_8p11.23	0.857	1
MYOT	18p-Del	0.857	1
MYOT	Amp_3q26.2	0.857	1
MYOT	Amp_8p11.23	0.857	1
POM121	18p-Del	0.857	1
POM121	Amp_3q26.2	0.857	1
POM121	Amp_8p11.23	0.857	1
Del_11q22.3	Del_12q24.32	0.857	1
ANO4	LILRB5	0.858	1
ANO4	RAG1	0.858	1
ANO4	SALL1	0.858	1
ANO4	ZMYM3	0.858	1
ANO4	FAM47C	0.858	1
ANO4	Amp_14q21.1	0.858	1
ANO4	Amp_16q11.2	0.858	1
APC	MED12	0.858	1
APC	LAMA3	0.858	1
APC	TP53BP1	0.858	1
APC	Amp_Xp21.1	0.858	1
KDM6A	MED12	0.858	1
KDM6A	L1CAM	0.858	1
KDM6A	SMG7	0.858	1
KDM6A	TP53BP1	0.858	1
KDM6A	Amp_4q13.3	0.858	1
KDM6A	Amp_Xp21.1	0.858	1
LILRB5	MED12	0.858	1
LILRB5	LAMA3	0.858	1
LILRB5	SMG7	0.858	1
LILRB5	TP53BP1	0.858	1
LILRB5	Amp_4q13.3	0.858	1
LILRB5	Amp_Xp21.1	0.858	1
MED12	RAG1	0.858	1
MED12	SALL1	0.858	1
MED12	Amp_14q21.1	0.858	1
MED12	Amp_16q11.2	0.858	1
NTM	Del_16q24.1	0.858	1
OR4D5	Del_16q24.1	0.858	1
RAG1	L1CAM	0.858	1
RAG1	LAMA3	0.858	1
RAG1	TP53BP1	0.858	1
RAG1	Amp_4q13.3	0.858	1
RAG1	Amp_Xp21.1	0.858	1
SALL1	L1CAM	0.858	1
SALL1	LAMA3	0.858	1
SALL1	SMG7	0.858	1
SALL1	TP53BP1	0.858	1
SALL1	Amp_4q13.3	0.858	1
SALL1	Amp_Xp21.1	0.858	1
ZMYM3	LAMA3	0.858	1
ZMYM3	Amp_4q13.3	0.858	1
ZMYM3	Amp_Xp21.1	0.858	1
CNTNAP1	Del_16q24.1	0.858	1
FAM47C	L1CAM	0.858	1
FAM47C	LAMA3	0.858	1
FAM47C	TP53BP1	0.858	1
FAM47C	Amp_4q13.3	0.858	1
FAM47C	Amp_Xp21.1	0.858	1
L1CAM	Amp_14q21.1	0.858	1
L1CAM	Amp_16q11.2	0.858	1
LAMA3	Amp_14q21.1	0.858	1
LAMA3	Amp_16q11.2	0.858	1
RPTN	Del_16q24.1	0.858	1
SMG7	Amp_14q21.1	0.858	1
SMG7	Amp_16q11.2	0.858	1
TP53BP1	Amp_14q21.1	0.858	1
TP53BP1	Amp_16q11.2	0.858	1
3p-Amp	Del_16q24.1	0.858	1
Amp_12q23.1	Del_13q22.1	0.858	1
Amp_13q12.11	Del_16q24.1	0.858	1
Amp_Xp22.11	Del_13q22.1	0.858	1
18p-Del	Amp_8q24.21	0.859	1
Del_2q22.1	Del_18q23	0.859	1
PTEN	Del_8p23.2	0.86	1
8p-Del	Del_21q22.2	0.86	1
Amp_1q22	Del_8p23.2	0.86	1
Del_16q22.3	Del_19q13.2	0.86	1
EMG1	Del_13q22.1	0.862	1
LMOD2	Amp_8q24.21	0.862	1
NKX3-1	Del_13q22.1	0.862	1
RPL11	Del_13q22.1	0.862	1
ESCO1	Del_13q22.1	0.862	1
KIRREL	Amp_8q24.21	0.862	1
ZNF709	Amp_8q24.21	0.862	1
7q-Amp	Del_18q21.31	0.862	1
Amp_8q24.21	Amp_Xq25	0.862	1
Del_5q21.1	Del_11q23.2	0.862	1
Del_11q23.2	Del_18q21.31	0.862	1
BHLHE22	Del_16q24.1	0.863	1
PTEN	Del_16q22.3	0.863	1
SMAD4	Del_8p21.3	0.863	1
EDC4	Del_16q24.1	0.863	1
ERN1	Del_16q24.1	0.863	1
FAM111A	Del_16q24.1	0.863	1
FAM120B	Del_16q24.1	0.863	1
TCEB3	Del_8p21.3	0.863	1
TCERG1	Del_8p21.3	0.863	1
9q-Amp	Del_2q22.3	0.863	1
BHLHE22	Del_1p22.1	0.864	1
BHLHE22	Del_21q22.2	0.864	1
EMG1	Amp_9q33.3	0.864	1
EMG1	Del_12q24.32	0.864	1
HRAS	Amp_11q13.2	0.864	1
IDH1	Amp_11q13.2	0.864	1
KIDINS220	Del_1p22.1	0.864	1
KIDINS220	Del_21q22.2	0.864	1
LCE2D	Amp_9q33.3	0.864	1
LCE2D	Del_12q24.32	0.864	1
LMOD2	Amp_11q13.2	0.864	1
NKX3-1	Amp_9q33.3	0.864	1
NKX3-1	Del_12q24.32	0.864	1
OR4P4	Amp_11q13.2	0.864	1
RPL11	Amp_9q33.3	0.864	1
RPL11	Del_12q24.32	0.864	1
SMAD4	Amp_9q33.3	0.864	1
SMAD4	Del_12q24.32	0.864	1
CDKN1B	Amp_11q13.2	0.864	1
CR1L	Amp_11q13.2	0.864	1
EDC4	Del_21q22.2	0.864	1
EHHADH	Amp_11q13.2	0.864	1
ERN1	Del_1p22.1	0.864	1
ERN1	Del_21q22.2	0.864	1
ESCO1	Amp_9q33.3	0.864	1
ESCO1	Del_12q24.32	0.864	1
FAM120B	Del_1p22.1	0.864	1
FAM120B	Del_21q22.2	0.864	1
GAGE2D	Del_1p22.1	0.864	1
GAGE2D	Del_21q22.2	0.864	1
KIRREL	Amp_11q13.2	0.864	1
MLLT10	Amp_9q33.3	0.864	1
MLLT10	Del_12q24.32	0.864	1
MYOT	Del_21q22.2	0.864	1
POM121	Del_1p22.1	0.864	1
POM121	Del_21q22.2	0.864	1
TCEB3	Amp_9q33.3	0.864	1
TCEB3	Del_12q24.32	0.864	1
TCERG1	Amp_9q33.3	0.864	1
TCERG1	Del_12q24.32	0.864	1
ZNF709	Amp_11q13.2	0.864	1
10p-Del	Amp_11q13.2	0.864	1
17p-Del	Amp_7q22.1	0.864	1
Amp_11q13.2	Amp_Xq21.1	0.864	1
Amp_11q13.2	Amp_Xq25	0.864	1
CTNNB1	MUC17	0.865	1
EPB41L3	NTM	0.865	1
EPB41L3	OR4D5	0.865	1
EPB41L3	CNTNAP1	0.865	1
EPB41L3	MED15	0.865	1
EPB41L3	RPTN	0.865	1
EPB41L3	TNRC18	0.865	1
EPB41L3	3p-Amp	0.865	1
EPB41L3	10q-Del	0.865	1
EPB41L3	8q-Del	0.865	1
EPB41L3	Xp-Del	0.865	1
EPB41L3	Xq-Del	0.865	1
EPB41L3	Amp_13q12.11	0.865	1
EPB41L3	Amp_15q11.2	0.865	1
EPB41L3	Amp_20q13.2	0.865	1
GRIA1	NTM	0.865	1
GRIA1	OR4D5	0.865	1
GRIA1	BMP2K	0.865	1
GRIA1	CNTNAP1	0.865	1
GRIA1	MED15	0.865	1
GRIA1	RPTN	0.865	1
GRIA1	TNRC18	0.865	1
GRIA1	3p-Amp	0.865	1
GRIA1	8q-Del	0.865	1
GRIA1	Xp-Del	0.865	1
GRIA1	Xq-Del	0.865	1
GRIA1	Amp_13q12.11	0.865	1
GRIA1	Amp_15q11.2	0.865	1
GRIA1	Amp_20q13.2	0.865	1
MUC17	PIK3CA	0.865	1
MUC17	13q-Del	0.865	1
NTM	6q-Del	0.865	1
OR4D5	6q-Del	0.865	1
BMP2K	6q-Del	0.865	1
CNTNAP1	6q-Del	0.865	1
10q-Del	6q-Del	0.865	1
6q-Del	8q-Del	0.865	1
6q-Del	Xp-Del	0.865	1
6q-Del	Xq-Del	0.865	1
6q-Del	Amp_15q11.2	0.865	1
Amp_7p14.3	Del_1p31.3	0.865	1
Del_1q42.3	Del_21q22.3	0.865	1
APC	Del_16q24.1	0.866	1
LILRB5	Del_16q24.1	0.866	1
SPOP	Amp_11q13.2	0.866	1
ZNF709	Amp_8q22.1	0.866	1
Amp_3q21.3	Del_3p13	0.866	1
Amp_8q22.1	Amp_Xq25	0.866	1
Amp_14q21.1	Del_16q24.1	0.866	1
Del_3p13	Del_11q22.3	0.866	1
PIK3CA	Del_10q23.31	0.867	1
7q-Amp	Del_17p13.1	0.867	1
18q-Del	Amp_7p14.3	0.867	1
Del_3p13	Del_16q24.1	0.867	1
NTM	SPOP	0.868	1
NTM	Del_6q14.3	0.868	1
OR4D5	SPOP	0.868	1
SPOP	BMP2K	0.868	1
SPOP	CNTNAP1	0.868	1
SPOP	MED15	0.868	1
SPOP	RPTN	0.868	1
SPOP	TNRC18	0.868	1
SPOP	Amp_20q13.2	0.868	1
CNTNAP1	Del_6q14.3	0.868	1
8p-Del	Amp_8q24.21	0.868	1
Amp_8q24.21	Del_12q24.32	0.868	1
Amp_13q12.11	Del_6q14.3	0.868	1
Amp_20q13.2	Del_6q14.3	0.868	1
Del_8p23.2	Del_21q22.2	0.868	1
9q-Amp	18q-Del	0.869	1
18p-Del	Del_13q22.1	0.869	1
18q-Del	Amp_12q23.1	0.869	1
18q-Del	Amp_Xp22.11	0.869	1
Del_9p23	Del_12q24.32	0.869	1
Del_12q24.32	Del_15q21.3	0.869	1
Del_12q24.32	Del_19q13.2	0.869	1
ATM	BHLHE22	0.87	1
ATM	EDC4	0.87	1
ATM	ERN1	0.87	1
ATM	FAM111A	0.87	1
ATM	FAM120B	0.87	1
ATM	GAGE2D	0.87	1
ATM	MYOT	0.87	1
ATM	POM121	0.87	1
BHLHE22	Amp_3q21.3	0.87	1
BHLHE22	Del_4q28.2	0.87	1
BHLHE22	Del_6q14.3	0.87	1
KIDINS220	Amp_3q21.3	0.87	1
KIDINS220	Del_4q28.2	0.87	1
KIDINS220	Del_11q22.3	0.87	1
SLC27A4	Del_8p21.3	0.87	1
EDC4	Amp_3q21.3	0.87	1
EDC4	Del_4q28.2	0.87	1
EDC4	Del_6q14.3	0.87	1
EDC4	Del_11q22.3	0.87	1
ERN1	Amp_3q21.3	0.87	1
ERN1	Del_4q28.2	0.87	1
ERN1	Del_6q14.3	0.87	1
ERN1	Del_11q22.3	0.87	1
FAM111A	Amp_3q21.3	0.87	1
FAM111A	Del_4q28.2	0.87	1
FAM111A	Del_11q22.3	0.87	1
FAM120B	Amp_3q21.3	0.87	1
FAM120B	Del_4q28.2	0.87	1
FAM120B	Del_11q22.3	0.87	1
GAGE2D	Amp_3q21.3	0.87	1
GAGE2D	Del_4q28.2	0.87	1
GAGE2D	Del_11q22.3	0.87	1
MYOT	Amp_3q21.3	0.87	1
MYOT	Del_4q28.2	0.87	1
MYOT	Del_6q14.3	0.87	1
MYOT	Del_11q22.3	0.87	1
POM121	Amp_3q21.3	0.87	1
POM121	Del_4q28.2	0.87	1
POM121	Del_11q22.3	0.87	1
17p-Del	Del_2q22.3	0.871	1
8p-Del	Del_1q42.3	0.871	1
Xp-Del	Del_8p21.3	0.871	1
Xq-Del	Del_8p21.3	0.871	1
Amp_13q12.11	Del_8p21.3	0.871	1
Amp_15q11.2	Del_8p21.3	0.871	1
ATM	PTEN	0.872	1
PTEN	Amp_3q21.3	0.872	1
PTEN	Del_11q22.3	0.872	1
ANO4	BRAF	0.873	1
ANO4	Amp_12q23.1	0.873	1
ANO4	Amp_Xp22.11	0.873	1
BRAF	MED12	0.873	1
BRAF	LAMA3	0.873	1
BRAF	Amp_4q13.3	0.873	1
BRAF	Amp_Xp21.1	0.873	1
EMG1	PTEN	0.873	1
GRIA1	Del_16q22.3	0.873	1
MED12	9q-Amp	0.873	1
MED12	Amp_12q23.1	0.873	1
MED12	Amp_Xp22.11	0.873	1
MED12	Amp_Xq27.1	0.873	1
NKX3-1	PTEN	0.873	1
OR4D5	Del_3p13	0.873	1
PTEN	RPL11	0.873	1
PTEN	SMAD4	0.873	1
PTEN	ESCO1	0.873	1
PTEN	MLLT10	0.873	1
PTEN	TCEB3	0.873	1
PTEN	TCERG1	0.873	1
BMP2K	Del_3p13	0.873	1
L1CAM	Amp_12q23.1	0.873	1
L1CAM	Amp_Xp22.11	0.873	1
LAMA3	9q-Amp	0.873	1
LAMA3	Amp_Xp22.11	0.873	1
LAMA3	Amp_Xq27.1	0.873	1
MED15	Del_5q13.2	0.873	1
RPTN	Del_3p13	0.873	1
SMG7	9q-Amp	0.873	1
SMG7	Amp_12q23.1	0.873	1
SMG7	Amp_Xq27.1	0.873	1
TP53BP1	9q-Amp	0.873	1
TP53BP1	Amp_12q23.1	0.873	1
TP53BP1	Amp_Xp22.11	0.873	1
TP53BP1	Amp_Xq27.1	0.873	1
9q-Amp	Amp_4q13.3	0.873	1
9q-Amp	Amp_Xp21.1	0.873	1
10q-Del	Del_3p13	0.873	1
6q-Del	Del_16q22.3	0.873	1
8q-Del	Del_3p13	0.873	1
8q-Del	Del_5q13.2	0.873	1
Amp_4q13.3	Amp_Xp22.11	0.873	1
Amp_4q13.3	Amp_Xq27.1	0.873	1
Amp_11q13.2	Del_5q13.2	0.873	1
Amp_13q12.11	Del_5q13.2	0.873	1
Amp_Xp21.1	Amp_Xq27.1	0.873	1
COL11A1	17p-Del	0.874	1
FOXA1	PIK3CA	0.874	1
HRAS	Del_18q21.31	0.874	1
IDH1	Del_18q21.31	0.874	1
OR4P4	Del_5q21.1	0.874	1
PIK3CA	17p-Del	0.874	1
CR1L	Del_5q21.1	0.874	1
EHHADH	Del_5q21.1	0.874	1
EHHADH	Del_18q21.31	0.874	1
KIRREL	Del_5q21.1	0.874	1
SMG7	Del_10q23.31	0.874	1
1q-Amp	Del_5q21.1	0.874	1
1q-Amp	Del_18q21.31	0.874	1
10p-Del	Del_5q21.1	0.874	1
22q-Del	Del_5q21.1	0.874	1
Amp_17q23.2	Del_5q21.1	0.874	1
Amp_17q23.2	Del_18q21.31	0.874	1
Amp_Xq21.1	Del_18q21.31	0.874	1
Amp_Xq25	Del_5q21.1	0.874	1
Amp_Xq25	Del_18q21.31	0.874	1
COL11A1	HRAS	0.875	1
COL11A1	IDH1	0.875	1
COL11A1	CR1L	0.875	1
COL11A1	EHHADH	0.875	1
COL11A1	KIRREL	0.875	1
COL11A1	ZNF709	0.875	1
COL11A1	1q-Amp	0.875	1
COL11A1	10p-Del	0.875	1
COL11A1	22q-Del	0.875	1
COL11A1	Amp_17q23.2	0.875	1
COL11A1	Amp_Xq21.1	0.875	1
COL11A1	Amp_Xq25	0.875	1
CTNNB1	HRAS	0.875	1
CTNNB1	OR4P4	0.875	1
CTNNB1	CR1L	0.875	1
CTNNB1	ZNF709	0.875	1
CTNNB1	1q-Amp	0.875	1
CTNNB1	10p-Del	0.875	1
CTNNB1	22q-Del	0.875	1
CTNNB1	Amp_17q23.2	0.875	1
CTNNB1	Amp_Xq21.1	0.875	1
CTNNB1	Amp_Xq25	0.875	1
HRAS	PIK3CA	0.875	1
HRAS	3q-Amp	0.875	1
HRAS	Amp_1q22	0.875	1
IDH1	PIK3CA	0.875	1
IDH1	3q-Amp	0.875	1
IDH1	Amp_1q22	0.875	1
KIDINS220	Del_21q22.3	0.875	1
LMOD2	PIK3CA	0.875	1
LMOD2	3q-Amp	0.875	1
NTM	Del_21q22.3	0.875	1
OR4P4	PIK3CA	0.875	1
OR4P4	3q-Amp	0.875	1
OR4P4	Amp_1q22	0.875	1
PIK3CA	CDKN1B	0.875	1
PIK3CA	CR1L	0.875	1
PIK3CA	EHHADH	0.875	1
PIK3CA	KIRREL	0.875	1
PIK3CA	1q-Amp	0.875	1
PIK3CA	10p-Del	0.875	1
PIK3CA	22q-Del	0.875	1
PIK3CA	Amp_17q23.2	0.875	1
PIK3CA	Amp_Xq21.1	0.875	1
CDKN1B	3q-Amp	0.875	1
CDKN1B	Amp_1q22	0.875	1
CR1L	3q-Amp	0.875	1
CR1L	Amp_1q22	0.875	1
EDC4	Del_21q22.3	0.875	1
EHHADH	3q-Amp	0.875	1
EHHADH	Amp_1q22	0.875	1
KIRREL	3q-Amp	0.875	1
KIRREL	Amp_1q22	0.875	1
TNRC18	Del_21q22.3	0.875	1
ZNF709	3q-Amp	0.875	1
ZNF709	Amp_1q22	0.875	1
1q-Amp	3q-Amp	0.875	1
3q-Amp	10p-Del	0.875	1
3q-Amp	22q-Del	0.875	1
3q-Amp	Amp_Xq21.1	0.875	1
3q-Amp	Amp_Xq25	0.875	1
10p-Del	Amp_1q22	0.875	1
10q-Del	Del_21q22.3	0.875	1
Amp_1q22	Amp_Xq21.1	0.875	1
Amp_1q22	Amp_Xq25	0.875	1
Amp_13q12.11	Del_21q22.3	0.875	1
APC	NTM	0.877	1
APC	OR4D5	0.877	1
APC	BMP2K	0.877	1
APC	CNTNAP1	0.877	1
APC	MED15	0.877	1
APC	RPTN	0.877	1
APC	TNRC18	0.877	1
APC	10q-Del	0.877	1
APC	8q-Del	0.877	1
APC	Xp-Del	0.877	1
APC	Xq-Del	0.877	1
APC	Amp_13q12.11	0.877	1
APC	Amp_15q11.2	0.877	1
BHLHE22	8p-Amp	0.877	1
BHLHE22	12p-Del	0.877	1
BHLHE22	Del_9p23	0.877	1
BHLHE22	Del_19q13.2	0.877	1
COL11A1	8p-Del	0.877	1
KDM6A	NTM	0.877	1
KDM6A	OR4D5	0.877	1
KDM6A	BMP2K	0.877	1
KDM6A	CNTNAP1	0.877	1
KDM6A	MED15	0.877	1
KDM6A	RPTN	0.877	1
KDM6A	TNRC18	0.877	1
KDM6A	3p-Amp	0.877	1
KDM6A	10q-Del	0.877	1
KDM6A	8q-Del	0.877	1
KDM6A	Amp_13q12.11	0.877	1
KDM6A	Amp_15q11.2	0.877	1
KDM6A	Amp_20q13.2	0.877	1
KIDINS220	8p-Amp	0.877	1
KIDINS220	12p-Del	0.877	1
KIDINS220	Del_9p23	0.877	1
KIDINS220	Del_15q21.3	0.877	1
KIDINS220	Del_19q13.2	0.877	1
LILRB5	NTM	0.877	1
LILRB5	OR4D5	0.877	1
LILRB5	BMP2K	0.877	1
LILRB5	CNTNAP1	0.877	1
LILRB5	MED15	0.877	1
LILRB5	RPTN	0.877	1
LILRB5	TNRC18	0.877	1
LILRB5	3p-Amp	0.877	1
LILRB5	10q-Del	0.877	1
LILRB5	8q-Del	0.877	1
LILRB5	Amp_13q12.11	0.877	1
LILRB5	Amp_20q13.2	0.877	1
NTM	RAG1	0.877	1
NTM	SALL1	0.877	1
NTM	FAM47C	0.877	1
NTM	Amp_14q21.1	0.877	1
NTM	Amp_16q11.2	0.877	1
OR4D5	RAG1	0.877	1
OR4D5	SALL1	0.877	1
OR4D5	FAM47C	0.877	1
OR4D5	Amp_14q21.1	0.877	1
OR4D5	Amp_16q11.2	0.877	1
RAG1	BMP2K	0.877	1
RAG1	CNTNAP1	0.877	1
RAG1	MED15	0.877	1
RAG1	RPTN	0.877	1
RAG1	3p-Amp	0.877	1
RAG1	10q-Del	0.877	1
RAG1	8q-Del	0.877	1
RAG1	Xp-Del	0.877	1
RAG1	Xq-Del	0.877	1
RAG1	Amp_13q12.11	0.877	1
RAG1	Amp_15q11.2	0.877	1
RAG1	Amp_20q13.2	0.877	1
SALL1	BMP2K	0.877	1
SALL1	CNTNAP1	0.877	1
SALL1	MED15	0.877	1
SALL1	RPTN	0.877	1
SALL1	TNRC18	0.877	1
SALL1	3p-Amp	0.877	1
SALL1	10q-Del	0.877	1
SALL1	8q-Del	0.877	1
SALL1	Xp-Del	0.877	1
SALL1	Xq-Del	0.877	1
SALL1	Amp_13q12.11	0.877	1
SALL1	Amp_15q11.2	0.877	1
SALL1	Amp_20q13.2	0.877	1
ZMYM3	BMP2K	0.877	1
ZMYM3	CNTNAP1	0.877	1
ZMYM3	TNRC18	0.877	1
ZMYM3	3p-Amp	0.877	1
ZMYM3	10q-Del	0.877	1
ZMYM3	8q-Del	0.877	1
ZMYM3	Xp-Del	0.877	1
ZMYM3	Xq-Del	0.877	1
ZMYM3	Amp_13q12.11	0.877	1
ZMYM3	Amp_20q13.2	0.877	1
BMP2K	Amp_14q21.1	0.877	1
BMP2K	Amp_16q11.2	0.877	1
CNTNAP1	FAM47C	0.877	1
CNTNAP1	Amp_16q11.2	0.877	1
EDC4	12p-Del	0.877	1
EDC4	Del_9p23	0.877	1
EDC4	Del_15q21.3	0.877	1
ERN1	8p-Amp	0.877	1
ERN1	12p-Del	0.877	1
ERN1	Del_15q21.3	0.877	1
ERN1	Del_19q13.2	0.877	1
FAM111A	8p-Amp	0.877	1
FAM111A	Del_19q13.2	0.877	1
FAM120B	8p-Amp	0.877	1
FAM120B	12p-Del	0.877	1
FAM120B	Del_9p23	0.877	1
FAM120B	Del_15q21.3	0.877	1
FAM120B	Del_19q13.2	0.877	1
FAM47C	MED15	0.877	1
FAM47C	TNRC18	0.877	1
FAM47C	3p-Amp	0.877	1
FAM47C	10q-Del	0.877	1
FAM47C	8q-Del	0.877	1
FAM47C	Xp-Del	0.877	1
FAM47C	Xq-Del	0.877	1
FAM47C	Amp_13q12.11	0.877	1
FAM47C	Amp_15q11.2	0.877	1
FAM47C	Amp_20q13.2	0.877	1
GAGE2D	8p-Amp	0.877	1
GAGE2D	12p-Del	0.877	1
GAGE2D	Del_9p23	0.877	1
GAGE2D	Del_15q21.3	0.877	1
GAGE2D	Del_19q13.2	0.877	1
MED15	Amp_14q21.1	0.877	1
MED15	Amp_16q11.2	0.877	1
MYOT	8p-Amp	0.877	1
MYOT	12p-Del	0.877	1
MYOT	Del_9p23	0.877	1
MYOT	Del_15q21.3	0.877	1
POM121	8p-Amp	0.877	1
POM121	12p-Del	0.877	1
POM121	Del_9p23	0.877	1
POM121	Del_15q21.3	0.877	1
POM121	Del_19q13.2	0.877	1
RPTN	Amp_14q21.1	0.877	1
TNRC18	Amp_14q21.1	0.877	1
TNRC18	Amp_16q11.2	0.877	1
3p-Amp	Amp_14q21.1	0.877	1
3q-Amp	8p-Del	0.877	1
7q-Amp	17p-Del	0.877	1
10q-Del	Amp_14q21.1	0.877	1
10q-Del	Amp_16q11.2	0.877	1
13q-Del	Del_1q42.3	0.877	1
8q-Del	Amp_14q21.1	0.877	1
8q-Del	Amp_16q11.2	0.877	1
Xp-Del	Amp_14q21.1	0.877	1
Xp-Del	Amp_16q11.2	0.877	1
Xq-Del	Amp_14q21.1	0.877	1
Xq-Del	Amp_16q11.2	0.877	1
Amp_1q22	Del_13q14.13	0.877	1
Amp_14q21.1	Amp_20q13.2	0.877	1
Del_1p31.3	Del_1q42.3	0.877	1
Del_1q42.3	Del_11q23.2	0.877	1
HRAS	Del_18q23	0.878	1
IDH1	Del_18q23	0.878	1
LILRB5	Del_6q14.3	0.878	1
SPOP	8p-Amp	0.878	1
TP53	Del_2q22.1	0.878	1
EHHADH	Del_18q23	0.878	1
1q-Amp	Del_18q23	0.878	1
Amp_12q23.1	Del_13q14.13	0.878	1
Amp_17q23.2	Del_18q23	0.878	1
Amp_Xq21.1	Del_18q23	0.878	1
Amp_Xq25	Del_18q23	0.878	1
Amp_Xq27.1	Del_13q14.13	0.878	1
Del_1p31.3	Del_5q11.2	0.878	1
HRAS	Del_8p23.2	0.879	1
MUC17	Amp_3q26.2	0.879	1
OR4P4	Del_8p23.2	0.879	1
CDKN1B	Del_8p23.2	0.879	1
CR1L	Del_8p23.2	0.879	1
10p-Del	Del_8p23.2	0.879	1
Amp_Xq21.1	Del_8p23.2	0.879	1
Amp_Xq25	Del_8p23.2	0.879	1
ANO4	16q-Del	0.88	1
MED12	16q-Del	0.88	1
L1CAM	16q-Del	0.88	1
LAMA3	16q-Del	0.88	1
16q-Del	Amp_Xp21.1	0.88	1
EMG1	ZFHX3	0.881	1
EMG1	Del_6p25.1	0.881	1
LCE2D	ZFHX3	0.881	1
MED12	8p-Del	0.881	1
NKX3-1	ZFHX3	0.881	1
NKX3-1	Del_6p25.1	0.881	1
RPL11	ZFHX3	0.881	1
RPL11	Del_6p25.1	0.881	1
SMAD4	ZFHX3	0.881	1
SMAD4	Del_6p25.1	0.881	1
ESCO1	ZFHX3	0.881	1
ESCO1	Del_6p25.1	0.881	1
MLLT10	ZFHX3	0.881	1
MLLT10	Del_6p25.1	0.881	1
SMG7	8p-Del	0.881	1
TCEB3	Del_6p25.1	0.881	1
TCERG1	ZFHX3	0.881	1
TCERG1	Del_6p25.1	0.881	1
8p-Del	Amp_4q13.3	0.881	1
ATM	Del_17q21.31	0.882	1
LMOD2	Del_5q11.2	0.882	1
NTM	TP53	0.882	1
NTM	Del_17q21.31	0.882	1
OR4P4	Del_5q11.2	0.882	1
TP53	CNTNAP1	0.882	1
TP53	TNRC18	0.882	1
TP53	Amp_15q11.2	0.882	1
BMP2K	Del_17q21.31	0.882	1
MED15	Del_17q21.31	0.882	1
10q-Del	Del_17q21.31	0.882	1
22q-Del	Del_5q11.2	0.882	1
Xp-Del	Del_17q21.31	0.882	1
Xq-Del	Del_17q21.31	0.882	1
Amp_8p11.23	Del_18q21.31	0.882	1
Amp_15q11.2	Del_17q21.31	0.882	1
Amp_17q23.2	Del_5q11.2	0.882	1
COL11A1	Amp_7q22.1	0.883	1
PIK3CA	Amp_7q22.1	0.883	1
8p-Del	Amp_8q22.1	0.883	1
MUC17	Del_3p13	0.884	1
PTEN	12p-Del	0.884	1
PTEN	16q-Del	0.884	1
PTEN	Del_15q21.3	0.884	1
SLC27A4	Amp_7p14.3	0.884	1
Del_3p13	Del_9p23	0.885	1
APC	Del_21q22.3	0.886	1
EPB41L3	HRAS	0.886	1
EPB41L3	IDH1	0.886	1
EPB41L3	LMOD2	0.886	1
EPB41L3	OR4P4	0.886	1
EPB41L3	CDKN1B	0.886	1
EPB41L3	CR1L	0.886	1
EPB41L3	EHHADH	0.886	1
EPB41L3	KIRREL	0.886	1
EPB41L3	ZNF709	0.886	1
EPB41L3	1q-Amp	0.886	1
EPB41L3	10p-Del	0.886	1
EPB41L3	22q-Del	0.886	1
EPB41L3	Amp_17q23.2	0.886	1
EPB41L3	Amp_Xq25	0.886	1
GRIA1	HRAS	0.886	1
GRIA1	IDH1	0.886	1
GRIA1	LMOD2	0.886	1
GRIA1	OR4P4	0.886	1
GRIA1	CDKN1B	0.886	1
GRIA1	CR1L	0.886	1
GRIA1	EHHADH	0.886	1
GRIA1	KIRREL	0.886	1
GRIA1	ZNF709	0.886	1
GRIA1	1q-Amp	0.886	1
GRIA1	22q-Del	0.886	1
GRIA1	Amp_17q23.2	0.886	1
GRIA1	Amp_Xq21.1	0.886	1
GRIA1	Amp_Xq25	0.886	1
HRAS	6q-Del	0.886	1
IDH1	6q-Del	0.886	1
LMOD2	6q-Del	0.886	1
OR4P4	6q-Del	0.886	1
ZMYM3	Del_21q22.3	0.886	1
CR1L	6q-Del	0.886	1
EHHADH	6q-Del	0.886	1
KIRREL	6q-Del	0.886	1
ZNF709	6q-Del	0.886	1
6q-Del	Amp_Xq21.1	0.886	1
MED15	Del_2q22.1	0.887	1
RPTN	Del_2q22.1	0.887	1
Amp_13q12.11	Del_2q22.1	0.887	1
ANO4	MED12	0.888	1
ANO4	LAMA3	0.888	1
ANO4	SMG7	0.888	1
ANO4	TP53BP1	0.888	1
ANO4	Amp_4q13.3	0.888	1
ANO4	Amp_Xp21.1	0.888	1
ATM	ZFHX3	0.888	1
EMG1	Del_12p13.1	0.888	1
MED12	L1CAM	0.888	1
MED12	LAMA3	0.888	1
MED12	SMG7	0.888	1
MED12	TP53BP1	0.888	1
MED12	Amp_4q13.3	0.888	1
MED12	Amp_Xp21.1	0.888	1
ESCO1	Del_12p13.1	0.888	1
L1CAM	LAMA3	0.888	1
L1CAM	Amp_4q13.3	0.888	1
L1CAM	Amp_Xp21.1	0.888	1
LAMA3	SMG7	0.888	1
LAMA3	TP53BP1	0.888	1
LAMA3	Amp_4q13.3	0.888	1
LAMA3	Amp_Xp21.1	0.888	1
MLLT10	Del_12p13.1	0.888	1
SMG7	Amp_4q13.3	0.888	1
SMG7	Amp_Xp21.1	0.888	1
TP53BP1	Amp_4q13.3	0.888	1
TP53BP1	Amp_Xp21.1	0.888	1
ZFHX3	Del_11q22.3	0.888	1
8q-Amp	Del_2q22.3	0.888	1
Amp_3q21.3	Del_6p25.1	0.888	1
Amp_8q22.1	Del_1p22.1	0.888	1
Del_4q28.2	Del_6p25.1	0.888	1
Del_6p25.1	Del_11q22.3	0.888	1
ATM	Del_6q14.3	0.889	1
FOXA1	SLC27A4	0.889	1
SLC27A4	17p-Del	0.889	1
SLC27A4	Del_1q42.3	0.889	1
Amp_7q22.1	Del_11q23.2	0.889	1
Amp_8p11.23	Del_18q23	0.889	1
ATM	Del_2q22.1	0.89	1
BHLHE22	Del_11p11.2	0.89	1
BRAF	NTM	0.89	1
BRAF	BMP2K	0.89	1
BRAF	CNTNAP1	0.89	1
BRAF	3p-Amp	0.89	1
BRAF	10q-Del	0.89	1
BRAF	8q-Del	0.89	1
BRAF	Xp-Del	0.89	1
BRAF	Xq-Del	0.89	1
BRAF	Amp_13q12.11	0.89	1
BRAF	Amp_15q11.2	0.89	1
BRAF	Amp_20q13.2	0.89	1
EMG1	Amp_11q13.2	0.89	1
KDM6A	Amp_8q24.21	0.89	1
KIDINS220	Del_11p11.2	0.89	1
LCE2D	Amp_11q13.2	0.89	1
LILRB5	Amp_8q24.21	0.89	1
LMOD2	Del_13q14.13	0.89	1
NKX3-1	Amp_11q13.2	0.89	1
NTM	9q-Amp	0.89	1
NTM	Amp_12q23.1	0.89	1
NTM	Amp_Xp22.11	0.89	1
NTM	Amp_Xq27.1	0.89	1
OR4D5	9q-Amp	0.89	1
OR4D5	Amp_12q23.1	0.89	1
OR4D5	Amp_Xp22.11	0.89	1
OR4D5	Amp_Xq27.1	0.89	1
OR4P4	Del_13q14.13	0.89	1
RPL11	Amp_11q13.2	0.89	1
SALL1	Amp_8q24.21	0.89	1
SMAD4	Amp_11q13.2	0.89	1
TP53	8q-Amp	0.89	1
ZMYM3	Amp_8q24.21	0.89	1
BMP2K	9q-Amp	0.89	1
BMP2K	Amp_12q23.1	0.89	1
BMP2K	Amp_Xp22.11	0.89	1
BMP2K	Amp_Xq27.1	0.89	1
CNTNAP1	9q-Amp	0.89	1
CNTNAP1	Amp_Xp22.11	0.89	1
CNTNAP1	Amp_Xq27.1	0.89	1
EDC4	Del_11p11.2	0.89	1
ESCO1	Amp_11q13.2	0.89	1
FAM111A	Del_11p11.2	0.89	1
FAM120B	Del_11p11.2	0.89	1
GAGE2D	Del_11p11.2	0.89	1
MED15	9q-Amp	0.89	1
MED15	Amp_12q23.1	0.89	1
MED15	Amp_Xp22.11	0.89	1
MED15	Amp_Xq27.1	0.89	1
MLLT10	Amp_11q13.2	0.89	1
MYOT	Del_11p11.2	0.89	1
POM121	Del_11p11.2	0.89	1
RPTN	9q-Amp	0.89	1
RPTN	Amp_12q23.1	0.89	1
RPTN	Amp_Xq27.1	0.89	1
TCEB3	Amp_11q13.2	0.89	1
TCERG1	Amp_11q13.2	0.89	1
TNRC18	9q-Amp	0.89	1
TNRC18	Amp_12q23.1	0.89	1
TNRC18	Amp_Xq27.1	0.89	1
ZNF709	Del_13q14.13	0.89	1
1q-Amp	Del_13q14.13	0.89	1
3p-Amp	9q-Amp	0.89	1
3p-Amp	Amp_12q23.1	0.89	1
3p-Amp	Amp_Xp22.11	0.89	1
9q-Amp	10q-Del	0.89	1
9q-Amp	8q-Del	0.89	1
9q-Amp	Amp_15q11.2	0.89	1
10q-Del	Amp_12q23.1	0.89	1
10q-Del	Amp_Xp22.11	0.89	1
10q-Del	Amp_Xq27.1	0.89	1
22q-Del	Del_13q14.13	0.89	1
8q-Del	Amp_12q23.1	0.89	1
8q-Del	Amp_Xp22.11	0.89	1
8q-Del	Amp_Xq27.1	0.89	1
Xp-Del	Amp_12q23.1	0.89	1
Xp-Del	Amp_Xp22.11	0.89	1
Xp-Del	Amp_Xq27.1	0.89	1
Xq-Del	Amp_12q23.1	0.89	1
Xq-Del	Amp_Xp22.11	0.89	1
Xq-Del	Amp_Xq27.1	0.89	1
Amp_12q23.1	Amp_20q13.2	0.89	1
Amp_13q12.11	Amp_Xq27.1	0.89	1
Amp_15q11.2	Amp_Xp22.11	0.89	1
Amp_15q11.2	Amp_Xq27.1	0.89	1
Amp_20q13.2	Amp_Xp22.11	0.89	1
LAMA3	Del_2q22.3	0.891	1
Amp_11q13.2	Del_6q14.3	0.891	1
BHLHE22	Del_16q22.3	0.892	1
COL11A1	SPOP	0.892	1
CTNNB1	SPOP	0.892	1
CTNNB1	13q-Del	0.892	1
CTNNB1	Del_11q23.2	0.892	1
MUC17	Del_21q22.2	0.892	1
OR4D5	8q-Amp	0.892	1
PIK3CA	7q-Amp	0.892	1
CNTNAP1	8q-Amp	0.892	1
ERN1	Del_16q22.3	0.892	1
FAM111A	Del_16q22.3	0.892	1
MYOT	Del_16q22.3	0.892	1
RPTN	8q-Amp	0.892	1
TNRC18	8q-Amp	0.892	1
3q-Amp	Del_1p31.3	0.892	1
3q-Amp	Del_11q23.2	0.892	1
8q-Amp	Amp_15q11.2	0.892	1
Del_13q22.1	Del_21q22.2	0.892	1
MUC17	Amp_8q24.21	0.893	1
PTEN	Amp_8q24.21	0.893	1
8p-Del	Amp_7q22.1	0.893	1
Del_12q24.32	Del_18q23	0.893	1
EPB41L3	FOXA1	0.894	1
GRIA1	17p-Del	0.894	1
KIDINS220	Del_17p13.1	0.894	1
6q-Del	Del_1q42.3	0.894	1
KDM6A	Amp_8q22.1	0.895	1
LILRB5	Amp_8q22.1	0.895	1
SALL1	Amp_8q22.1	0.895	1
ZMYM3	Amp_8q22.1	0.895	1
Del_2q22.3	Del_8p23.2	0.895	1
BHLHE22	Amp_9q33.3	0.896	1
BHLHE22	Del_12q24.32	0.896	1
KIDINS220	Amp_9q33.3	0.896	1
KIDINS220	Del_12q24.32	0.896	1
EDC4	Amp_9q33.3	0.896	1
EDC4	Del_12q24.32	0.896	1
ERN1	Amp_9q33.3	0.896	1
ERN1	Del_12q24.32	0.896	1
FAM111A	Amp_9q33.3	0.896	1
FAM111A	Del_12q24.32	0.896	1
FAM120B	Amp_9q33.3	0.896	1
FAM120B	Del_12q24.32	0.896	1
GAGE2D	Amp_9q33.3	0.896	1
GAGE2D	Del_12q24.32	0.896	1
MYOT	Amp_9q33.3	0.896	1
POM121	Amp_9q33.3	0.896	1
POM121	Del_12q24.32	0.896	1
Del_6p25.1	Del_16q22.3	0.896	1
ANO4	18q-Del	0.897	1
APC	HRAS	0.897	1
APC	IDH1	0.897	1
APC	LMOD2	0.897	1
APC	OR4P4	0.897	1
APC	CDKN1B	0.897	1
APC	CR1L	0.897	1
APC	EHHADH	0.897	1
APC	KIRREL	0.897	1
APC	ZNF709	0.897	1
APC	1q-Amp	0.897	1
APC	10p-Del	0.897	1
APC	Amp_Xq21.1	0.897	1
ATM	8q-Amp	0.897	1
HRAS	KDM6A	0.897	1
HRAS	LILRB5	0.897	1
HRAS	RAG1	0.897	1
HRAS	SALL1	0.897	1
HRAS	ZMYM3	0.897	1
HRAS	FAM47C	0.897	1
HRAS	Amp_14q21.1	0.897	1
HRAS	Amp_16q11.2	0.897	1
IDH1	KDM6A	0.897	1
IDH1	LILRB5	0.897	1
IDH1	RAG1	0.897	1
IDH1	SALL1	0.897	1
IDH1	FAM47C	0.897	1
IDH1	Amp_14q21.1	0.897	1
IDH1	Amp_16q11.2	0.897	1
KDM6A	OR4P4	0.897	1
KDM6A	CDKN1B	0.897	1
KDM6A	CR1L	0.897	1
KDM6A	EHHADH	0.897	1
KDM6A	KIRREL	0.897	1
KDM6A	ZNF709	0.897	1
KDM6A	1q-Amp	0.897	1
KDM6A	10p-Del	0.897	1
KDM6A	22q-Del	0.897	1
KDM6A	Amp_17q23.2	0.897	1
KDM6A	Amp_Xq21.1	0.897	1
KDM6A	Amp_Xq25	0.897	1
LILRB5	OR4P4	0.897	1
LILRB5	CDKN1B	0.897	1
LILRB5	CR1L	0.897	1
LILRB5	KIRREL	0.897	1
LILRB5	1q-Amp	0.897	1
LILRB5	10p-Del	0.897	1
LILRB5	22q-Del	0.897	1
LILRB5	Amp_17q23.2	0.897	1
LILRB5	Amp_Xq21.1	0.897	1
LILRB5	Amp_Xq25	0.897	1
LMOD2	RAG1	0.897	1
LMOD2	SALL1	0.897	1
LMOD2	ZMYM3	0.897	1
LMOD2	FAM47C	0.897	1
LMOD2	Amp_14q21.1	0.897	1
LMOD2	Amp_16q11.2	0.897	1
NTM	Del_16q22.3	0.897	1
OR4D5	Del_16q22.3	0.897	1
OR4P4	RAG1	0.897	1
OR4P4	SALL1	0.897	1
OR4P4	ZMYM3	0.897	1
OR4P4	FAM47C	0.897	1
OR4P4	Amp_14q21.1	0.897	1
OR4P4	Amp_16q11.2	0.897	1
PIK3CA	Del_3p13	0.897	1
PIK3CA	Del_5q13.2	0.897	1
RAG1	CDKN1B	0.897	1
RAG1	CR1L	0.897	1
RAG1	EHHADH	0.897	1
RAG1	KIRREL	0.897	1
RAG1	ZNF709	0.897	1
RAG1	1q-Amp	0.897	1
RAG1	10p-Del	0.897	1
RAG1	22q-Del	0.897	1
RAG1	Amp_17q23.2	0.897	1
RAG1	Amp_Xq21.1	0.897	1
RAG1	Amp_Xq25	0.897	1
SALL1	CDKN1B	0.897	1
SALL1	CR1L	0.897	1
SALL1	EHHADH	0.897	1
SALL1	KIRREL	0.897	1
SALL1	ZNF709	0.897	1
SALL1	1q-Amp	0.897	1
SALL1	10p-Del	0.897	1
SALL1	22q-Del	0.897	1
SALL1	Amp_17q23.2	0.897	1
SALL1	Amp_Xq21.1	0.897	1
SALL1	Amp_Xq25	0.897	1
ZMYM3	CR1L	0.897	1
ZMYM3	EHHADH	0.897	1
ZMYM3	KIRREL	0.897	1
ZMYM3	10p-Del	0.897	1
ZMYM3	22q-Del	0.897	1
ZMYM3	Amp_Xq21.1	0.897	1
ZMYM3	Amp_Xq25	0.897	1
CDKN1B	FAM47C	0.897	1
CDKN1B	Amp_14q21.1	0.897	1
CDKN1B	Amp_16q11.2	0.897	1
CR1L	FAM47C	0.897	1
EHHADH	Amp_14q21.1	0.897	1
EHHADH	Amp_16q11.2	0.897	1
FAM47C	KIRREL	0.897	1
FAM47C	ZNF709	0.897	1
FAM47C	1q-Amp	0.897	1
FAM47C	10p-Del	0.897	1
FAM47C	22q-Del	0.897	1
FAM47C	Amp_17q23.2	0.897	1
FAM47C	Amp_Xq21.1	0.897	1
FAM47C	Amp_Xq25	0.897	1
KIRREL	Amp_14q21.1	0.897	1
KIRREL	Amp_16q11.2	0.897	1
L1CAM	18q-Del	0.897	1
LAMA3	18q-Del	0.897	1
RPTN	Del_16q22.3	0.897	1
ZNF709	Amp_14q21.1	0.897	1
1q-Amp	Amp_14q21.1	0.897	1
1q-Amp	Amp_16q11.2	0.897	1
3p-Amp	Del_16q22.3	0.897	1
8q-Amp	Amp_3q21.3	0.897	1
10p-Del	Amp_14q21.1	0.897	1
10p-Del	Amp_16q11.2	0.897	1
10q-Del	Del_16q22.3	0.897	1
16q-Del	Amp_8p11.23	0.897	1
18q-Del	Amp_Xp21.1	0.897	1
22q-Del	Amp_16q11.2	0.897	1
Xp-Del	Del_16q22.3	0.897	1
Xq-Del	Del_16q22.3	0.897	1
Amp_1q22	Del_5q13.2	0.897	1
Amp_13q12.11	Del_16q22.3	0.897	1
Amp_14q21.1	Amp_Xq21.1	0.897	1
Amp_14q21.1	Amp_Xq25	0.897	1
Amp_16q11.2	Amp_Xq21.1	0.897	1
Amp_16q11.2	Amp_Xq25	0.897	1
PTEN	Amp_8q22.1	0.898	1
SLC27A4	13q-Del	0.898	1
SLC27A4	Del_11q23.2	0.898	1
ZFHX3	Del_15q21.3	0.898	1
Del_6p25.1	Del_19q13.2	0.898	1
Del_8p23.2	Del_11p11.2	0.898	1
Del_8p21.3	Del_11q22.3	0.898	1
COL11A1	EMG1	0.899	1
COL11A1	LCE2D	0.899	1
COL11A1	NKX3-1	0.899	1
COL11A1	RPL11	0.899	1
COL11A1	SMAD4	0.899	1
COL11A1	ESCO1	0.899	1
COL11A1	MLLT10	0.899	1
COL11A1	TCEB3	0.899	1
COL11A1	TCERG1	0.899	1
CTNNB1	EMG1	0.899	1
CTNNB1	LCE2D	0.899	1
CTNNB1	NKX3-1	0.899	1
CTNNB1	ESCO1	0.899	1
CTNNB1	MLLT10	0.899	1
CTNNB1	TCEB3	0.899	1
CTNNB1	TCERG1	0.899	1
EMG1	3q-Amp	0.899	1
EMG1	Amp_1q22	0.899	1
KDM6A	7p-Amp	0.899	1
LCE2D	PIK3CA	0.899	1
LCE2D	3q-Amp	0.899	1
LCE2D	Amp_1q22	0.899	1
NKX3-1	PIK3CA	0.899	1
NKX3-1	3q-Amp	0.899	1
NKX3-1	Amp_1q22	0.899	1
PIK3CA	ESCO1	0.899	1
PIK3CA	MLLT10	0.899	1
PIK3CA	TCEB3	0.899	1
PIK3CA	TCERG1	0.899	1
RPL11	3q-Amp	0.899	1
RPL11	Amp_1q22	0.899	1
SMAD4	3q-Amp	0.899	1
TP53	8p-Amp	0.899	1
ESCO1	3q-Amp	0.899	1
ESCO1	Amp_1q22	0.899	1
FAM47C	7p-Amp	0.899	1
MLLT10	3q-Amp	0.899	1
MLLT10	Amp_1q22	0.899	1
SMG7	Del_13q22.1	0.899	1
TCEB3	3q-Amp	0.899	1
TCEB3	Amp_1q22	0.899	1
TCERG1	3q-Amp	0.899	1
TCERG1	Amp_1q22	0.899	1
TP53BP1	Del_13q22.1	0.899	1
7p-Amp	Amp_14q21.1	0.899	1
7p-Amp	Del_18q21.31	0.899	1
Amp_Xp21.1	Del_13q22.1	0.899	1
Del_4q28.2	Del_8p23.2	0.899	1
Del_8p23.2	Del_11q22.3	0.899	1
Del_11q22.3	Del_21q22.3	0.899	1
ATM	Amp_8q24.21	0.9	1
COL11A1	Amp_3q26.2	0.9	1
COL11A1	Amp_8p11.23	0.9	1
CTNNB1	Amp_8p11.23	0.9	1
NTM	Del_17p13.1	0.9	1
PIK3CA	18p-Del	0.9	1
Amp_15q11.2	Del_17p13.1	0.9	1
EPB41L3	Amp_7q22.1	0.901	1
Del_9p23	Del_16q24.1	0.901	1
Del_16q24.1	Del_19q13.2	0.901	1
SLC27A4	18p-Del	0.902	1
SLC27A4	Amp_3q26.2	0.902	1
SLC27A4	Amp_8p11.23	0.902	1
17p-Del	Del_1p22.1	0.902	1
Del_1q42.3	Del_21q22.2	0.902	1
BHLHE22	PTEN	0.903	1
KIDINS220	PTEN	0.903	1
PTEN	EDC4	0.903	1
PTEN	ERN1	0.903	1
PTEN	FAM111A	0.903	1
PTEN	GAGE2D	0.903	1
PTEN	MYOT	0.903	1
PTEN	POM121	0.903	1
16q-Del	Del_6p25.1	0.903	1
Del_2q22.3	Del_10q23.31	0.903	1
ANO4	OR4D5	0.904	1
ANO4	BMP2K	0.904	1
ANO4	CNTNAP1	0.904	1
ANO4	MED15	0.904	1
ANO4	RPTN	0.904	1
ANO4	TNRC18	0.904	1
ANO4	3p-Amp	0.904	1
ANO4	10q-Del	0.904	1
ANO4	8q-Del	0.904	1
ANO4	Xp-Del	0.904	1
ANO4	Xq-Del	0.904	1
ANO4	Amp_13q12.11	0.904	1
ANO4	Amp_15q11.2	0.904	1
APC	Del_18q21.31	0.904	1
KDM6A	Del_5q21.1	0.904	1
LILRB5	Del_5q21.1	0.904	1
LILRB5	Del_18q21.31	0.904	1
MED12	CNTNAP1	0.904	1
MED12	MED15	0.904	1
MED12	RPTN	0.904	1
MED12	TNRC18	0.904	1
MED12	3p-Amp	0.904	1
MED12	10q-Del	0.904	1
MED12	8q-Del	0.904	1
MED12	Xp-Del	0.904	1
MED12	Xq-Del	0.904	1
MED12	Amp_13q12.11	0.904	1
MED12	Amp_15q11.2	0.904	1
MED12	Amp_20q13.2	0.904	1
MUC17	Amp_3q21.3	0.904	1
MUC17	Del_4q28.2	0.904	1
MUC17	Del_8p23.2	0.904	1
NTM	L1CAM	0.904	1
NTM	LAMA3	0.904	1
NTM	SMG7	0.904	1
NTM	TP53BP1	0.904	1
NTM	Amp_4q13.3	0.904	1
NTM	Amp_Xp21.1	0.904	1
OR4D5	L1CAM	0.904	1
OR4D5	LAMA3	0.904	1
OR4D5	SMG7	0.904	1
OR4D5	TP53BP1	0.904	1
OR4D5	Amp_4q13.3	0.904	1
OR4D5	Amp_Xp21.1	0.904	1
BMP2K	L1CAM	0.904	1
BMP2K	LAMA3	0.904	1
BMP2K	SMG7	0.904	1
BMP2K	TP53BP1	0.904	1
BMP2K	Amp_4q13.3	0.904	1
BMP2K	Amp_Xp21.1	0.904	1
CNTNAP1	L1CAM	0.904	1
CNTNAP1	LAMA3	0.904	1
CNTNAP1	SMG7	0.904	1
CNTNAP1	TP53BP1	0.904	1
L1CAM	TNRC18	0.904	1
L1CAM	3p-Amp	0.904	1
L1CAM	10q-Del	0.904	1
L1CAM	8q-Del	0.904	1
L1CAM	Xp-Del	0.904	1
L1CAM	Xq-Del	0.904	1
L1CAM	Amp_13q12.11	0.904	1
L1CAM	Amp_15q11.2	0.904	1
LAMA3	MED15	0.904	1
LAMA3	RPTN	0.904	1
LAMA3	TNRC18	0.904	1
LAMA3	3p-Amp	0.904	1
LAMA3	10q-Del	0.904	1
LAMA3	8q-Del	0.904	1
LAMA3	Amp_13q12.11	0.904	1
LAMA3	Amp_15q11.2	0.904	1
LAMA3	Amp_20q13.2	0.904	1
MED15	Amp_4q13.3	0.904	1
MED15	Amp_Xp21.1	0.904	1
RPTN	Amp_4q13.3	0.904	1
RPTN	Amp_Xp21.1	0.904	1
SMG7	3p-Amp	0.904	1
SMG7	10q-Del	0.904	1
SMG7	8q-Del	0.904	1
SMG7	Xp-Del	0.904	1
SMG7	Xq-Del	0.904	1
SMG7	Amp_13q12.11	0.904	1
SMG7	Amp_15q11.2	0.904	1
SMG7	Amp_20q13.2	0.904	1
TNRC18	TP53BP1	0.904	1
TNRC18	Amp_Xp21.1	0.904	1
TP53BP1	3p-Amp	0.904	1
TP53BP1	10q-Del	0.904	1
TP53BP1	8q-Del	0.904	1
TP53BP1	Xp-Del	0.904	1
TP53BP1	Xq-Del	0.904	1
TP53BP1	Amp_13q12.11	0.904	1
TP53BP1	Amp_15q11.2	0.904	1
TP53BP1	Amp_20q13.2	0.904	1
3p-Amp	Amp_Xp21.1	0.904	1
10q-Del	Amp_4q13.3	0.904	1
10q-Del	Amp_Xp21.1	0.904	1
8q-Del	Amp_4q13.3	0.904	1
8q-Del	Amp_Xp21.1	0.904	1
Xp-Del	Amp_4q13.3	0.904	1
Xp-Del	Amp_Xp21.1	0.904	1
Xq-Del	Amp_4q13.3	0.904	1
Xq-Del	Amp_Xp21.1	0.904	1
Amp_9q33.3	Del_12q24.32	0.904	1
Amp_14q21.1	Del_5q21.1	0.904	1
Amp_14q21.1	Del_18q21.31	0.904	1
Amp_16q11.2	Del_5q21.1	0.904	1
Amp_16q11.2	Del_18q21.31	0.904	1
Amp_20q13.2	Amp_Xp21.1	0.904	1
Del_1q42.3	Del_13q22.1	0.904	1
KDM6A	MUC17	0.905	1
KDM6A	Amp_7p14.3	0.905	1
MUC17	Amp_16q11.2	0.905	1
SPOP	EHHADH	0.905	1
SPOP	KIRREL	0.905	1
SPOP	Amp_Xq21.1	0.905	1
SPOP	Amp_Xq25	0.905	1
FAM47C	Amp_7p14.3	0.905	1
Del_2q22.1	Del_9p23	0.906	1
FOXA1	Del_16q22.3	0.907	1
PTEN	8p-Del	0.907	1
SLC27A4	Del_21q22.2	0.907	1
Del_18q23	Del_21q22.2	0.907	1
BRAF	HRAS	0.908	1
BRAF	IDH1	0.908	1
BRAF	LMOD2	0.908	1
BRAF	OR4P4	0.908	1
BRAF	CR1L	0.908	1
BRAF	KIRREL	0.908	1
BRAF	1q-Amp	0.908	1
BRAF	10p-Del	0.908	1
BRAF	22q-Del	0.908	1
BRAF	Amp_17q23.2	0.908	1
COL11A1	Del_1p22.1	0.908	1
CTNNB1	TP53	0.908	1
CTNNB1	Del_17q21.31	0.908	1
EMG1	EPB41L3	0.908	1
EPB41L3	LCE2D	0.908	1
EPB41L3	NKX3-1	0.908	1
EPB41L3	RPL11	0.908	1
EPB41L3	SMAD4	0.908	1
EPB41L3	ESCO1	0.908	1
EPB41L3	MLLT10	0.908	1
EPB41L3	TCEB3	0.908	1
EPB41L3	TCERG1	0.908	1
GRIA1	LCE2D	0.908	1
GRIA1	NKX3-1	0.908	1
GRIA1	RPL11	0.908	1
GRIA1	SMAD4	0.908	1
GRIA1	ESCO1	0.908	1
GRIA1	MLLT10	0.908	1
GRIA1	TCEB3	0.908	1
GRIA1	TCERG1	0.908	1
HRAS	9q-Amp	0.908	1
HRAS	Amp_12q23.1	0.908	1
HRAS	Amp_Xp22.11	0.908	1
HRAS	Amp_Xq27.1	0.908	1
IDH1	9q-Amp	0.908	1
IDH1	Amp_12q23.1	0.908	1
IDH1	Amp_Xp22.11	0.908	1
IDH1	Amp_Xq27.1	0.908	1
KIDINS220	Del_10q23.31	0.908	1
LCE2D	6q-Del	0.908	1
LILRB5	Del_18q23	0.908	1
LMOD2	9q-Amp	0.908	1
LMOD2	Amp_12q23.1	0.908	1
LMOD2	Amp_Xq27.1	0.908	1
MUC17	Del_2q22.1	0.908	1
NKX3-1	6q-Del	0.908	1
OR4P4	9q-Amp	0.908	1
OR4P4	Amp_12q23.1	0.908	1
OR4P4	Amp_Xp22.11	0.908	1
OR4P4	Amp_Xq27.1	0.908	1
PIK3CA	Del_1p22.1	0.908	1
RAG1	Del_18q23	0.908	1
RPL11	6q-Del	0.908	1
SMAD4	6q-Del	0.908	1
CDKN1B	9q-Amp	0.908	1
CDKN1B	Amp_12q23.1	0.908	1
CDKN1B	Amp_Xp22.11	0.908	1
CDKN1B	Amp_Xq27.1	0.908	1
CR1L	9q-Amp	0.908	1
CR1L	Amp_Xp22.11	0.908	1
CR1L	Amp_Xq27.1	0.908	1
EDC4	Del_10q23.31	0.908	1
EHHADH	Amp_12q23.1	0.908	1
EHHADH	Amp_Xp22.11	0.908	1
EHHADH	Amp_Xq27.1	0.908	1
ESCO1	6q-Del	0.908	1
FAM120B	Del_10q23.31	0.908	1
KIRREL	9q-Amp	0.908	1
KIRREL	Amp_12q23.1	0.908	1
KIRREL	Amp_Xp22.11	0.908	1
KIRREL	Amp_Xq27.1	0.908	1
MLLT10	6q-Del	0.908	1
TCEB3	6q-Del	0.908	1
TCERG1	6q-Del	0.908	1
ZNF709	9q-Amp	0.908	1
ZNF709	Amp_12q23.1	0.908	1
ZNF709	Amp_Xp22.11	0.908	1
1q-Amp	9q-Amp	0.908	1
1q-Amp	Amp_12q23.1	0.908	1
1q-Amp	Amp_Xq27.1	0.908	1
9q-Amp	10p-Del	0.908	1
9q-Amp	Amp_Xq21.1	0.908	1
10p-Del	Amp_Xp22.11	0.908	1
10p-Del	Amp_Xq27.1	0.908	1
18q-Del	Del_11q23.2	0.908	1
22q-Del	Amp_Xp22.11	0.908	1
Amp_12q23.1	Amp_17q23.2	0.908	1
Amp_12q23.1	Amp_Xq21.1	0.908	1
Amp_12q23.1	Amp_Xq25	0.908	1
Amp_14q21.1	Del_18q23	0.908	1
Amp_Xp22.11	Amp_Xq21.1	0.908	1
Amp_Xp22.11	Amp_Xq25	0.908	1
Amp_Xq21.1	Amp_Xq27.1	0.908	1
NKX3-1	Amp_8q24.21	0.909	1
OR4P4	Del_5q13.2	0.909	1
PTEN	Del_5q21.1	0.909	1
PTEN	Del_18q21.31	0.909	1
CDKN1B	Del_3p13	0.909	1
EHHADH	Del_3p13	0.909	1
MLLT10	Amp_8q24.21	0.909	1
ZNF709	Del_3p13	0.909	1
1q-Amp	Del_3p13	0.909	1
10p-Del	Del_3p13	0.909	1
22q-Del	Del_5q13.2	0.909	1
Amp_17q23.2	Del_5q13.2	0.909	1
Amp_Xq21.1	Del_3p13	0.909	1
Del_16q22.3	Del_21q22.2	0.909	1
BHLHE22	ZFHX3	0.91	1
BHLHE22	Del_6p25.1	0.91	1
KIDINS220	ZFHX3	0.91	1
KIDINS220	Del_6p25.1	0.91	1
OR4D5	16q-Del	0.91	1
EDC4	ZFHX3	0.91	1
EDC4	Del_6p25.1	0.91	1
ERN1	ZFHX3	0.91	1
ERN1	Del_6p25.1	0.91	1
FAM111A	ZFHX3	0.91	1
FAM120B	ZFHX3	0.91	1
FAM120B	Del_6p25.1	0.91	1
GAGE2D	ZFHX3	0.91	1
GAGE2D	Del_6p25.1	0.91	1
MED15	16q-Del	0.91	1
MYOT	ZFHX3	0.91	1
MYOT	Del_6p25.1	0.91	1
POM121	ZFHX3	0.91	1
POM121	Del_6p25.1	0.91	1
RPTN	16q-Del	0.91	1
16q-Del	8q-Del	0.91	1
16q-Del	Xp-Del	0.91	1
16q-Del	Xq-Del	0.91	1
16q-Del	Amp_13q12.11	0.91	1
16q-Del	Amp_15q11.2	0.91	1
16q-Del	Amp_20q13.2	0.91	1
18p-Del	Del_11q23.2	0.91	1
Amp_8q24.21	Del_1q42.3	0.91	1
Amp_Xp22.11	Del_16q24.1	0.91	1
ATM	SLC27A4	0.911	1
SLC27A4	Amp_3q21.3	0.911	1
SLC27A4	Del_4q28.2	0.911	1
SLC27A4	Del_11q22.3	0.911	1
12p-Del	Amp_11q13.2	0.911	1
16q-Del	Del_21q22.2	0.911	1
Amp_8p11.23	Del_16q24.1	0.911	1
Amp_9q33.3	Del_21q22.3	0.911	1
Amp_11q13.2	Del_15q21.3	0.911	1
APC	FOXA1	0.912	1
APC	17p-Del	0.912	1
EMG1	Amp_8q22.1	0.912	1
FOXA1	LILRB5	0.912	1
FOXA1	SALL1	0.912	1
FOXA1	Amp_14q21.1	0.912	1
NKX3-1	Amp_8q22.1	0.912	1
SALL1	17p-Del	0.912	1
ZMYM3	17p-Del	0.912	1
FAM120B	8p-Del	0.912	1
MLLT10	Amp_8q22.1	0.912	1
MYOT	8p-Del	0.912	1
Amp_14q21.1	Del_1q42.3	0.912	1
Amp_16q11.2	Del_5q11.2	0.912	1
ATM	17p-Del	0.913	1
COL11A1	Del_2q22.1	0.913	1
COL11A1	Del_16q24.1	0.913	1
3q-Amp	Del_16q24.1	0.913	1
7q-Amp	8p-Del	0.913	1
8q-Amp	Del_19q13.2	0.913	1
17p-Del	Del_4q28.2	0.913	1
17p-Del	Del_11q22.3	0.913	1
8p-Del	Del_11q23.2	0.913	1
Amp_1q22	Del_2q22.1	0.913	1
Del_11q23.2	Del_21q22.3	0.913	1
PTEN	Del_8p21.3	0.914	1
TP53	Del_1q42.3	0.914	1
17p-Del	Del_17q21.31	0.914	1
Amp_7p14.3	Del_18q21.31	0.914	1
ANO4	Del_8p23.2	0.915	1
EPB41L3	SPOP	0.915	1
HRAS	Del_16q24.1	0.915	1
LMOD2	Del_16q24.1	0.915	1
OR4P4	Del_16q24.1	0.915	1
CDKN1B	Del_16q24.1	0.915	1
CR1L	Del_16q24.1	0.915	1
LAMA3	Del_8p23.2	0.915	1
ZNF709	Del_16q24.1	0.915	1
22q-Del	Del_16q24.1	0.915	1
Amp_4q13.3	Del_8p23.2	0.915	1
Amp_8q24.21	Del_6p25.1	0.915	1
Amp_Xp21.1	Del_8p23.2	0.915	1
Del_2q22.3	Del_6p25.1	0.915	1
ATM	Amp_1q22	0.916	1
COL11A1	Amp_3q21.3	0.916	1
CTNNB1	Del_11q22.3	0.916	1
GRIA1	18p-Del	0.916	1
LMOD2	Del_17q21.31	0.916	1
MUC17	8q-Amp	0.916	1
MUC17	12p-Del	0.916	1
OR4P4	TP53	0.916	1
SLC27A4	8p-Amp	0.916	1
SLC27A4	12p-Del	0.916	1
SLC27A4	Del_9p23	0.916	1
SLC27A4	Del_15q21.3	0.916	1
SLC27A4	Del_19q13.2	0.916	1
TP53	CR1L	0.916	1
TP53	ZNF709	0.916	1
TP53	10p-Del	0.916	1
TP53	22q-Del	0.916	1
TP53	Amp_17q23.2	0.916	1
CDKN1B	Del_17q21.31	0.916	1
CR1L	Del_17q21.31	0.916	1
KIRREL	Del_17q21.31	0.916	1
1q-Amp	Del_17q21.31	0.916	1
Amp_1q22	Del_4q28.2	0.916	1
Amp_17q23.2	Del_17q21.31	0.916	1
APC	EMG1	0.917	1
APC	LCE2D	0.917	1
APC	NKX3-1	0.917	1
APC	RPL11	0.917	1
APC	SMAD4	0.917	1
APC	ESCO1	0.917	1
APC	MLLT10	0.917	1
APC	TCEB3	0.917	1
APC	TCERG1	0.917	1
BHLHE22	Amp_11q13.2	0.917	1
EMG1	KDM6A	0.917	1
EMG1	LILRB5	0.917	1
EMG1	RAG1	0.917	1
EMG1	ZMYM3	0.917	1
EMG1	FAM47C	0.917	1
EMG1	Amp_14q21.1	0.917	1
EMG1	Amp_16q11.2	0.917	1
KDM6A	LCE2D	0.917	1
KDM6A	NKX3-1	0.917	1
KDM6A	RPL11	0.917	1
KDM6A	SMAD4	0.917	1
KDM6A	ESCO1	0.917	1
KDM6A	MLLT10	0.917	1
KDM6A	TCEB3	0.917	1
KDM6A	TCERG1	0.917	1
KIDINS220	Amp_11q13.2	0.917	1
LCE2D	LILRB5	0.917	1
LCE2D	RAG1	0.917	1
LCE2D	SALL1	0.917	1
LCE2D	ZMYM3	0.917	1
LCE2D	FAM47C	0.917	1
LCE2D	Amp_14q21.1	0.917	1
LCE2D	Amp_16q11.2	0.917	1
LILRB5	NKX3-1	0.917	1
LILRB5	RPL11	0.917	1
LILRB5	SMAD4	0.917	1
LILRB5	MLLT10	0.917	1
LILRB5	TCEB3	0.917	1
LILRB5	TCERG1	0.917	1
NKX3-1	RAG1	0.917	1
NKX3-1	SALL1	0.917	1
NKX3-1	ZMYM3	0.917	1
NKX3-1	FAM47C	0.917	1
NKX3-1	Amp_14q21.1	0.917	1
NKX3-1	Amp_16q11.2	0.917	1
NTM	BMP2K	0.917	1
NTM	CNTNAP1	0.917	1
NTM	MED15	0.917	1
NTM	RPTN	0.917	1
NTM	3p-Amp	0.917	1
NTM	10q-Del	0.917	1
NTM	8q-Del	0.917	1
NTM	Xp-Del	0.917	1
NTM	Xq-Del	0.917	1
NTM	Amp_13q12.11	0.917	1
NTM	Amp_15q11.2	0.917	1
NTM	Amp_20q13.2	0.917	1
NTM	Del_10q23.31	0.917	1
OR4D5	BMP2K	0.917	1
OR4D5	CNTNAP1	0.917	1
OR4D5	MED15	0.917	1
OR4D5	RPTN	0.917	1
OR4D5	TNRC18	0.917	1
OR4D5	3p-Amp	0.917	1
OR4D5	10q-Del	0.917	1
OR4D5	8q-Del	0.917	1
OR4D5	Xp-Del	0.917	1
OR4D5	Xq-Del	0.917	1
OR4D5	Amp_13q12.11	0.917	1
OR4D5	Amp_20q13.2	0.917	1
RAG1	RPL11	0.917	1
RAG1	SMAD4	0.917	1
RAG1	ESCO1	0.917	1
RAG1	MLLT10	0.917	1
RAG1	TCEB3	0.917	1
RAG1	TCERG1	0.917	1
RPL11	SALL1	0.917	1
RPL11	ZMYM3	0.917	1
RPL11	FAM47C	0.917	1
RPL11	Amp_14q21.1	0.917	1
RPL11	Amp_16q11.2	0.917	1
SALL1	ESCO1	0.917	1
SALL1	MLLT10	0.917	1
SALL1	TCEB3	0.917	1
SALL1	TCERG1	0.917	1
SMAD4	ZMYM3	0.917	1
SMAD4	FAM47C	0.917	1
SMAD4	Amp_14q21.1	0.917	1
SMAD4	Amp_16q11.2	0.917	1
ZMYM3	ESCO1	0.917	1
ZMYM3	MLLT10	0.917	1
ZMYM3	TCEB3	0.917	1
ZMYM3	TCERG1	0.917	1
BMP2K	CNTNAP1	0.917	1
BMP2K	MED15	0.917	1
BMP2K	RPTN	0.917	1
BMP2K	TNRC18	0.917	1
BMP2K	3p-Amp	0.917	1
BMP2K	10q-Del	0.917	1
BMP2K	8q-Del	0.917	1
BMP2K	Xp-Del	0.917	1
BMP2K	Xq-Del	0.917	1
BMP2K	Amp_13q12.11	0.917	1
BMP2K	Amp_15q11.2	0.917	1
BMP2K	Amp_20q13.2	0.917	1
CNTNAP1	MED15	0.917	1
CNTNAP1	RPTN	0.917	1
CNTNAP1	TNRC18	0.917	1
CNTNAP1	3p-Amp	0.917	1
CNTNAP1	10q-Del	0.917	1
CNTNAP1	8q-Del	0.917	1
CNTNAP1	Xp-Del	0.917	1
CNTNAP1	Xq-Del	0.917	1
CNTNAP1	Amp_20q13.2	0.917	1
EDC4	Amp_11q13.2	0.917	1
ERN1	Amp_11q13.2	0.917	1
ESCO1	FAM47C	0.917	1
ESCO1	Amp_14q21.1	0.917	1
ESCO1	Amp_16q11.2	0.917	1
FAM111A	Amp_11q13.2	0.917	1
FAM120B	Amp_11q13.2	0.917	1
FAM47C	TCEB3	0.917	1
GAGE2D	Amp_11q13.2	0.917	1
MED15	TNRC18	0.917	1
MED15	10q-Del	0.917	1
MED15	Xp-Del	0.917	1
MED15	Xq-Del	0.917	1
MED15	Amp_13q12.11	0.917	1
MED15	Amp_15q11.2	0.917	1
MED15	Amp_20q13.2	0.917	1
MYOT	Amp_11q13.2	0.917	1
POM121	Amp_11q13.2	0.917	1
RPTN	TNRC18	0.917	1
RPTN	10q-Del	0.917	1
RPTN	8q-Del	0.917	1
RPTN	Xp-Del	0.917	1
RPTN	Xq-Del	0.917	1
RPTN	Amp_13q12.11	0.917	1
RPTN	Amp_15q11.2	0.917	1
RPTN	Amp_20q13.2	0.917	1
TCEB3	Amp_14q21.1	0.917	1
TCEB3	Amp_16q11.2	0.917	1
TCERG1	Amp_14q21.1	0.917	1
TCERG1	Amp_16q11.2	0.917	1
TNRC18	3p-Amp	0.917	1
TNRC18	8q-Del	0.917	1
TNRC18	Xp-Del	0.917	1
TNRC18	Xq-Del	0.917	1
TNRC18	Amp_13q12.11	0.917	1
TNRC18	Amp_15q11.2	0.917	1
TNRC18	Amp_20q13.2	0.917	1
3p-Amp	10q-Del	0.917	1
3p-Amp	8q-Del	0.917	1
3p-Amp	Xp-Del	0.917	1
3p-Amp	Xq-Del	0.917	1
3p-Amp	Amp_13q12.11	0.917	1
3p-Amp	Amp_15q11.2	0.917	1
10q-Del	Xp-Del	0.917	1
10q-Del	Xq-Del	0.917	1
10q-Del	Amp_15q11.2	0.917	1
10q-Del	Amp_20q13.2	0.917	1
8q-Del	Xp-Del	0.917	1
8q-Del	Xq-Del	0.917	1
8q-Del	Amp_15q11.2	0.917	1
8q-Del	Amp_20q13.2	0.917	1
8q-Del	Del_10q23.31	0.917	1
Xp-Del	Amp_15q11.2	0.917	1
Xp-Del	Amp_20q13.2	0.917	1
Xq-Del	Amp_15q11.2	0.917	1
Xq-Del	Amp_20q13.2	0.917	1
Amp_13q12.11	Amp_20q13.2	0.917	1
Amp_15q11.2	Amp_20q13.2	0.917	1
Del_6p25.1	Del_11p11.2	0.917	1
BRAF	Del_6q14.3	0.918	1
CTNNB1	8q-Amp	0.918	1
KDM6A	Amp_7q22.1	0.918	1
LCE2D	Del_18q21.31	0.918	1
NKX3-1	Del_18q21.31	0.918	1
FAM47C	Amp_7q22.1	0.918	1
MLLT10	Del_5q21.1	0.918	1
MLLT10	Del_18q21.31	0.918	1
TCERG1	Del_18q21.31	0.918	1
3q-Amp	8q-Amp	0.918	1
7p-Amp	Amp_12q23.1	0.918	1
7p-Amp	Amp_Xp22.11	0.918	1
9q-Amp	Del_6q14.3	0.918	1
10q-Del	Del_2q22.3	0.918	1
8q-Del	Del_2q22.3	0.918	1
Amp_7q22.1	Amp_14q21.1	0.918	1
Amp_13q12.11	Del_2q22.3	0.918	1
ANO4	HRAS	0.919	1
ANO4	IDH1	0.919	1
ANO4	LMOD2	0.919	1
ANO4	OR4P4	0.919	1
ANO4	CDKN1B	0.919	1
ANO4	CR1L	0.919	1
ANO4	EHHADH	0.919	1
ANO4	KIRREL	0.919	1
ANO4	ZNF709	0.919	1
ANO4	1q-Amp	0.919	1
ANO4	10p-Del	0.919	1
ANO4	Amp_Xq21.1	0.919	1
GRIA1	Del_3p13	0.919	1
HRAS	MED12	0.919	1
HRAS	L1CAM	0.919	1
HRAS	LAMA3	0.919	1
HRAS	SMG7	0.919	1
HRAS	TP53BP1	0.919	1
HRAS	Amp_Xp21.1	0.919	1
IDH1	MED12	0.919	1
IDH1	L1CAM	0.919	1
IDH1	LAMA3	0.919	1
IDH1	SMG7	0.919	1
IDH1	TP53BP1	0.919	1
IDH1	Amp_4q13.3	0.919	1
IDH1	Amp_Xp21.1	0.919	1
LMOD2	MED12	0.919	1
LMOD2	LAMA3	0.919	1
LMOD2	SMG7	0.919	1
LMOD2	TP53BP1	0.919	1
LMOD2	Amp_4q13.3	0.919	1
MED12	OR4P4	0.919	1
MED12	CR1L	0.919	1
MED12	EHHADH	0.919	1
MED12	KIRREL	0.919	1
MED12	ZNF709	0.919	1
MED12	22q-Del	0.919	1
MED12	Amp_17q23.2	0.919	1
MED12	Amp_Xq21.1	0.919	1
MED12	Amp_Xq25	0.919	1
OR4P4	LAMA3	0.919	1
OR4P4	SMG7	0.919	1
OR4P4	TP53BP1	0.919	1
OR4P4	Amp_4q13.3	0.919	1
OR4P4	Amp_Xp21.1	0.919	1
CDKN1B	LAMA3	0.919	1
CDKN1B	Amp_4q13.3	0.919	1
CDKN1B	Amp_Xp21.1	0.919	1
CR1L	L1CAM	0.919	1
CR1L	LAMA3	0.919	1
CR1L	SMG7	0.919	1
CR1L	TP53BP1	0.919	1
CR1L	Amp_Xp21.1	0.919	1
EHHADH	L1CAM	0.919	1
EHHADH	LAMA3	0.919	1
EHHADH	SMG7	0.919	1
EHHADH	TP53BP1	0.919	1
EHHADH	Amp_4q13.3	0.919	1
EHHADH	Amp_Xp21.1	0.919	1
KIRREL	L1CAM	0.919	1
KIRREL	LAMA3	0.919	1
KIRREL	SMG7	0.919	1
KIRREL	TP53BP1	0.919	1
KIRREL	Amp_4q13.3	0.919	1
KIRREL	Amp_Xp21.1	0.919	1
L1CAM	1q-Amp	0.919	1
L1CAM	10p-Del	0.919	1
L1CAM	Amp_Xq21.1	0.919	1
LAMA3	ZNF709	0.919	1
LAMA3	1q-Amp	0.919	1
LAMA3	10p-Del	0.919	1
LAMA3	22q-Del	0.919	1
LAMA3	Amp_17q23.2	0.919	1
LAMA3	Amp_Xq21.1	0.919	1
LAMA3	Amp_Xq25	0.919	1
SMG7	1q-Amp	0.919	1
SMG7	10p-Del	0.919	1
SMG7	22q-Del	0.919	1
SMG7	Amp_17q23.2	0.919	1
SMG7	Amp_Xq21.1	0.919	1
SMG7	Amp_Xq25	0.919	1
TP53BP1	10p-Del	0.919	1
TP53BP1	22q-Del	0.919	1
TP53BP1	Amp_17q23.2	0.919	1
TP53BP1	Amp_Xq21.1	0.919	1
TP53BP1	Amp_Xq25	0.919	1
ZNF709	Amp_4q13.3	0.919	1
ZNF709	Amp_Xp21.1	0.919	1
1q-Amp	Amp_4q13.3	0.919	1
10p-Del	Amp_4q13.3	0.919	1
10p-Del	Amp_Xp21.1	0.919	1
6q-Del	Del_5q13.2	0.919	1
Amp_4q13.3	Amp_Xq21.1	0.919	1
Amp_4q13.3	Amp_Xq25	0.919	1
Amp_8q22.1	Del_6p25.1	0.919	1
Amp_17q23.2	Amp_Xp21.1	0.919	1
Amp_Xp21.1	Amp_Xq21.1	0.919	1
Del_2q22.3	Del_8p21.3	0.919	1
CR1L	Del_2q22.1	0.92	1
EHHADH	Del_2q22.1	0.92	1
KIRREL	Del_2q22.1	0.92	1
1q-Amp	Del_2q22.1	0.92	1
7q-Amp	Del_21q22.2	0.92	1
10p-Del	Del_2q22.1	0.92	1
13q-Del	Del_21q22.2	0.92	1
18p-Del	Amp_8p11.23	0.92	1
18q-Del	Amp_3q26.2	0.92	1
18q-Del	Amp_8p11.23	0.92	1
Del_1p22.1	Del_11q23.2	0.92	1
FOXA1	Del_16q24.1	0.921	1
LCE2D	Del_18q23	0.921	1
NKX3-1	Del_18q23	0.921	1
KIRREL	Del_6q14.3	0.921	1
MLLT10	Del_18q23	0.921	1
TCERG1	Del_18q23	0.921	1
MUC17	Del_13q14.13	0.922	1
NTM	18q-Del	0.922	1
BMP2K	8p-Del	0.922	1
MED15	18q-Del	0.922	1
TNRC18	18q-Del	0.922	1
3p-Amp	8p-Del	0.922	1
18q-Del	Xp-Del	0.922	1
18q-Del	Xq-Del	0.922	1
8p-Del	Amp_13q12.11	0.922	1
8p-Del	Amp_15q11.2	0.922	1
Del_9p23	Del_21q22.3	0.922	1
Del_15q21.3	Del_21q22.3	0.922	1
Del_19q13.2	Del_21q22.3	0.922	1
BHLHE22	COL11A1	0.923	1
BHLHE22	CTNNB1	0.923	1
BHLHE22	PIK3CA	0.923	1
BHLHE22	3q-Amp	0.923	1
BHLHE22	Amp_1q22	0.923	1
BHLHE22	Del_13q22.1	0.923	1
COL11A1	KIDINS220	0.923	1
COL11A1	EDC4	0.923	1
COL11A1	ERN1	0.923	1
COL11A1	FAM111A	0.923	1
COL11A1	FAM120B	0.923	1
COL11A1	GAGE2D	0.923	1
COL11A1	MYOT	0.923	1
COL11A1	POM121	0.923	1
CTNNB1	KIDINS220	0.923	1
CTNNB1	EDC4	0.923	1
CTNNB1	ERN1	0.923	1
CTNNB1	FAM111A	0.923	1
CTNNB1	FAM120B	0.923	1
CTNNB1	GAGE2D	0.923	1
CTNNB1	MYOT	0.923	1
CTNNB1	POM121	0.923	1
CTNNB1	Del_6q14.3	0.923	1
KIDINS220	PIK3CA	0.923	1
KIDINS220	3q-Amp	0.923	1
KIDINS220	Amp_1q22	0.923	1
KIDINS220	Del_13q22.1	0.923	1
LCE2D	Del_5q11.2	0.923	1
PIK3CA	ERN1	0.923	1
PIK3CA	FAM111A	0.923	1
PIK3CA	FAM120B	0.923	1
PIK3CA	GAGE2D	0.923	1
PIK3CA	MYOT	0.923	1
PIK3CA	POM121	0.923	1
EDC4	3q-Amp	0.923	1
EDC4	Amp_1q22	0.923	1
ERN1	3q-Amp	0.923	1
ERN1	Amp_1q22	0.923	1
ERN1	Del_13q22.1	0.923	1
ESCO1	Del_5q11.2	0.923	1
FAM111A	3q-Amp	0.923	1
FAM111A	Amp_1q22	0.923	1
FAM120B	3q-Amp	0.923	1
FAM120B	Amp_1q22	0.923	1
FAM120B	Del_13q22.1	0.923	1
GAGE2D	3q-Amp	0.923	1
GAGE2D	Amp_1q22	0.923	1
MLLT10	Del_5q11.2	0.923	1
MYOT	3q-Amp	0.923	1
MYOT	Amp_1q22	0.923	1
POM121	3q-Amp	0.923	1
POM121	Amp_1q22	0.923	1
TCEB3	Del_5q11.2	0.923	1
TCERG1	Del_5q11.2	0.923	1
ZFHX3	Del_10q23.31	0.923	1
ZNF709	8q-Amp	0.923	1
1q-Amp	8q-Amp	0.923	1
8q-Amp	22q-Del	0.923	1
6q-Del	Del_21q22.2	0.923	1
Amp_8q22.1	Del_9p23	0.923	1
BRAF	MUC17	0.924	1
COL11A1	8p-Amp	0.924	1
COL11A1	Del_9p23	0.924	1
COL11A1	Del_15q21.3	0.924	1
CTNNB1	Del_15q21.3	0.924	1
FOXA1	Del_9p23	0.924	1
MUC17	Amp_12q23.1	0.924	1
MUC17	Amp_Xq27.1	0.924	1
PIK3CA	12p-Del	0.924	1
PIK3CA	Del_19q13.2	0.924	1
3q-Amp	8p-Amp	0.924	1
3q-Amp	Del_9p23	0.924	1
3q-Amp	Del_19q13.2	0.924	1
8p-Amp	Del_1q42.3	0.924	1
9q-Amp	Del_21q22.3	0.924	1
12p-Del	17p-Del	0.924	1
17p-Del	Del_15q21.3	0.924	1
Amp_7p14.3	Amp_12q23.1	0.924	1
Amp_7p14.3	Amp_Xp22.11	0.924	1
Amp_11q13.2	Del_16q22.3	0.924	1
Del_1q42.3	Del_9p23	0.924	1
APC	7q-Amp	0.925	1
APC	13q-Del	0.925	1
APC	Del_1p31.3	0.925	1
KDM6A	7q-Amp	0.925	1
SALL1	13q-Del	0.925	1
SLC27A4	Del_11p11.2	0.925	1
FAM47C	7q-Amp	0.925	1
KIRREL	Del_21q22.3	0.925	1
LAMA3	Del_12p13.1	0.925	1
7q-Amp	Amp_14q21.1	0.925	1
22q-Del	Del_21q22.3	0.925	1
Amp_16q11.2	Del_1p31.3	0.925	1
Amp_16q11.2	Del_11q23.2	0.925	1
Amp_Xq21.1	Del_21q22.3	0.925	1
Amp_Xq25	Del_21q22.3	0.925	1
BRAF	EMG1	0.926	1
BRAF	LCE2D	0.926	1
BRAF	NKX3-1	0.926	1
BRAF	RPL11	0.926	1
BRAF	SMAD4	0.926	1
BRAF	ESCO1	0.926	1
BRAF	TCEB3	0.926	1
BRAF	TCERG1	0.926	1
EMG1	9q-Amp	0.926	1
EMG1	Amp_12q23.1	0.926	1
EMG1	Amp_Xp22.11	0.926	1
EMG1	Amp_Xq27.1	0.926	1
LCE2D	9q-Amp	0.926	1
LCE2D	Amp_12q23.1	0.926	1
LCE2D	Amp_Xp22.11	0.926	1
LCE2D	Amp_Xq27.1	0.926	1
NKX3-1	9q-Amp	0.926	1
NKX3-1	Amp_12q23.1	0.926	1
NKX3-1	Amp_Xp22.11	0.926	1
NKX3-1	Amp_Xq27.1	0.926	1
RPL11	9q-Amp	0.926	1
RPL11	Amp_12q23.1	0.926	1
RPL11	Amp_Xp22.11	0.926	1
RPL11	Amp_Xq27.1	0.926	1
SMAD4	9q-Amp	0.926	1
SMAD4	Amp_12q23.1	0.926	1
SMAD4	Amp_Xp22.11	0.926	1
SMAD4	Amp_Xq27.1	0.926	1
ESCO1	9q-Amp	0.926	1
ESCO1	Amp_12q23.1	0.926	1
ESCO1	Amp_Xq27.1	0.926	1
MLLT10	9q-Amp	0.926	1
MLLT10	Amp_Xp22.11	0.926	1
MLLT10	Amp_Xq27.1	0.926	1
TCEB3	9q-Amp	0.926	1
TCEB3	Amp_12q23.1	0.926	1
TCEB3	Amp_Xp22.11	0.926	1
TCEB3	Amp_Xq27.1	0.926	1
TCERG1	9q-Amp	0.926	1
TCERG1	Amp_12q23.1	0.926	1
TCERG1	Amp_Xp22.11	0.926	1
Amp_9q33.3	Del_6p25.1	0.926	1
Del_1p31.3	Del_3p13	0.926	1
Del_1p31.3	Del_5q13.2	0.926	1
Del_5q13.2	Del_11q23.2	0.926	1
Del_6p25.1	Del_12q24.32	0.926	1
17p-Del	Del_5q21.1	0.927	1
ATM	Del_5q11.2	0.928	1
EPB41L3	Del_17q21.31	0.928	1
GRIA1	Del_17q21.31	0.928	1
ZFHX3	Del_5q21.1	0.928	1
8q-Amp	Del_1q42.3	0.928	1
18q-Del	Amp_8q24.21	0.928	1
6q-Del	Del_17q21.31	0.928	1
Amp_11q13.2	Del_11p11.2	0.928	1
Del_2q22.1	Del_18q21.31	0.928	1
ATM	Del_16q22.3	0.929	1
BRAF	17p-Del	0.929	1
BRAF	Del_1q42.3	0.929	1
COL11A1	Del_21q22.3	0.929	1
FOXA1	9q-Amp	0.929	1
PIK3CA	Del_21q22.3	0.929	1
SLC27A4	Del_8p23.2	0.929	1
TP53	8p-Del	0.929	1
17p-Del	Amp_12q23.1	0.929	1
17p-Del	Amp_Xq27.1	0.929	1
18p-Del	Del_1p22.1	0.929	1
Amp_3q21.3	Del_16q22.3	0.929	1
BHLHE22	EPB41L3	0.93	1
BHLHE22	GRIA1	0.93	1
BHLHE22	6q-Del	0.93	1
BRAF	Del_5q21.1	0.93	1
EPB41L3	KIDINS220	0.93	1
EPB41L3	EDC4	0.93	1
EPB41L3	ERN1	0.93	1
EPB41L3	FAM111A	0.93	1
EPB41L3	FAM120B	0.93	1
EPB41L3	GAGE2D	0.93	1
EPB41L3	MYOT	0.93	1
GRIA1	KIDINS220	0.93	1
GRIA1	ERN1	0.93	1
GRIA1	FAM111A	0.93	1
GRIA1	FAM120B	0.93	1
GRIA1	GAGE2D	0.93	1
GRIA1	MYOT	0.93	1
GRIA1	POM121	0.93	1
GRIA1	Del_11q22.3	0.93	1
HRAS	NTM	0.93	1
HRAS	OR4D5	0.93	1
HRAS	BMP2K	0.93	1
HRAS	CNTNAP1	0.93	1
HRAS	MED15	0.93	1
HRAS	RPTN	0.93	1
HRAS	TNRC18	0.93	1
HRAS	3p-Amp	0.93	1
HRAS	10q-Del	0.93	1
HRAS	Xp-Del	0.93	1
HRAS	Xq-Del	0.93	1
HRAS	Amp_13q12.11	0.93	1
HRAS	Amp_15q11.2	0.93	1
HRAS	Amp_20q13.2	0.93	1
IDH1	NTM	0.93	1
IDH1	OR4D5	0.93	1
IDH1	BMP2K	0.93	1
IDH1	CNTNAP1	0.93	1
IDH1	RPTN	0.93	1
IDH1	TNRC18	0.93	1
IDH1	3p-Amp	0.93	1
IDH1	8q-Del	0.93	1
IDH1	Xp-Del	0.93	1
IDH1	Xq-Del	0.93	1
IDH1	Amp_13q12.11	0.93	1
IDH1	Amp_15q11.2	0.93	1
IDH1	Amp_20q13.2	0.93	1
KIDINS220	6q-Del	0.93	1
LMOD2	NTM	0.93	1
LMOD2	OR4D5	0.93	1
LMOD2	BMP2K	0.93	1
LMOD2	CNTNAP1	0.93	1
LMOD2	MED15	0.93	1
LMOD2	RPTN	0.93	1
LMOD2	TNRC18	0.93	1
LMOD2	3p-Amp	0.93	1
LMOD2	10q-Del	0.93	1
LMOD2	8q-Del	0.93	1
LMOD2	Xp-Del	0.93	1
LMOD2	Xq-Del	0.93	1
LMOD2	Amp_13q12.11	0.93	1
LMOD2	Amp_15q11.2	0.93	1
LMOD2	Amp_20q13.2	0.93	1
NTM	OR4P4	0.93	1
NTM	CDKN1B	0.93	1
NTM	CR1L	0.93	1
NTM	EHHADH	0.93	1
NTM	KIRREL	0.93	1
NTM	ZNF709	0.93	1
NTM	10p-Del	0.93	1
NTM	22q-Del	0.93	1
NTM	Amp_17q23.2	0.93	1
NTM	Amp_Xq21.1	0.93	1
NTM	Amp_Xq25	0.93	1
OR4D5	OR4P4	0.93	1
OR4D5	CDKN1B	0.93	1
OR4D5	CR1L	0.93	1
OR4D5	EHHADH	0.93	1
OR4D5	KIRREL	0.93	1
OR4D5	ZNF709	0.93	1
OR4D5	10p-Del	0.93	1
OR4D5	22q-Del	0.93	1
OR4D5	Amp_17q23.2	0.93	1
OR4P4	BMP2K	0.93	1
OR4P4	CNTNAP1	0.93	1
OR4P4	MED15	0.93	1
OR4P4	RPTN	0.93	1
OR4P4	TNRC18	0.93	1
OR4P4	3p-Amp	0.93	1
OR4P4	8q-Del	0.93	1
OR4P4	Xp-Del	0.93	1
OR4P4	Xq-Del	0.93	1
OR4P4	Amp_13q12.11	0.93	1
OR4P4	Amp_15q11.2	0.93	1
OR4P4	Amp_20q13.2	0.93	1
PIK3CA	Del_12p13.1	0.93	1
SLC27A4	Amp_9q33.3	0.93	1
CDKN1B	CNTNAP1	0.93	1
CDKN1B	TNRC18	0.93	1
CDKN1B	3p-Amp	0.93	1
CDKN1B	10q-Del	0.93	1
CDKN1B	8q-Del	0.93	1
CDKN1B	Xp-Del	0.93	1
CDKN1B	Xq-Del	0.93	1
CDKN1B	Amp_13q12.11	0.93	1
CDKN1B	Amp_15q11.2	0.93	1
CDKN1B	Amp_20q13.2	0.93	1
BMP2K	CR1L	0.93	1
BMP2K	EHHADH	0.93	1
BMP2K	KIRREL	0.93	1
BMP2K	ZNF709	0.93	1
BMP2K	1q-Amp	0.93	1
BMP2K	22q-Del	0.93	1
BMP2K	Amp_17q23.2	0.93	1
BMP2K	Amp_Xq21.1	0.93	1
BMP2K	Amp_Xq25	0.93	1
CNTNAP1	CR1L	0.93	1
CNTNAP1	EHHADH	0.93	1
CNTNAP1	KIRREL	0.93	1
CNTNAP1	ZNF709	0.93	1
CNTNAP1	1q-Amp	0.93	1
CNTNAP1	10p-Del	0.93	1
CNTNAP1	Amp_17q23.2	0.93	1
CNTNAP1	Amp_Xq21.1	0.93	1
CNTNAP1	Amp_Xq25	0.93	1
CR1L	MED15	0.93	1
CR1L	RPTN	0.93	1
CR1L	TNRC18	0.93	1
CR1L	3p-Amp	0.93	1
CR1L	10q-Del	0.93	1
CR1L	8q-Del	0.93	1
CR1L	Xp-Del	0.93	1
CR1L	Xq-Del	0.93	1
CR1L	Amp_13q12.11	0.93	1
CR1L	Amp_15q11.2	0.93	1
CR1L	Amp_20q13.2	0.93	1
EHHADH	MED15	0.93	1
EHHADH	RPTN	0.93	1
EHHADH	TNRC18	0.93	1
EHHADH	3p-Amp	0.93	1
EHHADH	10q-Del	0.93	1
EHHADH	8q-Del	0.93	1
EHHADH	Amp_13q12.11	0.93	1
EHHADH	Amp_15q11.2	0.93	1
EHHADH	Amp_20q13.2	0.93	1
ERN1	6q-Del	0.93	1
FAM111A	6q-Del	0.93	1
FAM120B	6q-Del	0.93	1
GAGE2D	6q-Del	0.93	1
KIRREL	MED15	0.93	1
KIRREL	RPTN	0.93	1
KIRREL	TNRC18	0.93	1
KIRREL	3p-Amp	0.93	1
KIRREL	10q-Del	0.93	1
KIRREL	8q-Del	0.93	1
KIRREL	Xp-Del	0.93	1
KIRREL	Xq-Del	0.93	1
KIRREL	Amp_13q12.11	0.93	1
KIRREL	Amp_15q11.2	0.93	1
KIRREL	Amp_20q13.2	0.93	1
MED15	1q-Amp	0.93	1
MED15	10p-Del	0.93	1
MED15	22q-Del	0.93	1
MED15	Amp_17q23.2	0.93	1
MED15	Amp_Xq21.1	0.93	1
MED15	Amp_Xq25	0.93	1
MYOT	6q-Del	0.93	1
POM121	6q-Del	0.93	1
RPTN	1q-Amp	0.93	1
RPTN	10p-Del	0.93	1
RPTN	22q-Del	0.93	1
RPTN	Amp_17q23.2	0.93	1
RPTN	Amp_Xq21.1	0.93	1
RPTN	Amp_Xq25	0.93	1
TNRC18	ZNF709	0.93	1
TNRC18	1q-Amp	0.93	1
TNRC18	10p-Del	0.93	1
TNRC18	22q-Del	0.93	1
TNRC18	Amp_17q23.2	0.93	1
TNRC18	Amp_Xq21.1	0.93	1
TNRC18	Amp_Xq25	0.93	1
ZNF709	3p-Amp	0.93	1
ZNF709	10q-Del	0.93	1
ZNF709	8q-Del	0.93	1
ZNF709	Xp-Del	0.93	1
ZNF709	Xq-Del	0.93	1
ZNF709	Amp_13q12.11	0.93	1
ZNF709	Amp_20q13.2	0.93	1
1q-Amp	3p-Amp	0.93	1
1q-Amp	10q-Del	0.93	1
1q-Amp	8q-Del	0.93	1
1q-Amp	Xp-Del	0.93	1
1q-Amp	Xq-Del	0.93	1
1q-Amp	Amp_13q12.11	0.93	1
1q-Amp	Amp_15q11.2	0.93	1
1q-Amp	Amp_20q13.2	0.93	1
3p-Amp	10p-Del	0.93	1
3p-Amp	22q-Del	0.93	1
3p-Amp	Amp_Xq21.1	0.93	1
3p-Amp	Amp_Xq25	0.93	1
7q-Amp	Del_11q22.3	0.93	1
9q-Amp	Del_18q21.31	0.93	1
10p-Del	8q-Del	0.93	1
10p-Del	Xp-Del	0.93	1
10p-Del	Xq-Del	0.93	1
10p-Del	Amp_13q12.11	0.93	1
10p-Del	Amp_15q11.2	0.93	1
10p-Del	Amp_20q13.2	0.93	1
10q-Del	22q-Del	0.93	1
10q-Del	Amp_17q23.2	0.93	1
10q-Del	Amp_Xq25	0.93	1
13q-Del	Del_4q28.2	0.93	1
13q-Del	Del_11q22.3	0.93	1
22q-Del	8q-Del	0.93	1
22q-Del	Xp-Del	0.93	1
22q-Del	Xq-Del	0.93	1
6q-Del	Del_11q22.3	0.93	1
8q-Del	Amp_17q23.2	0.93	1
8q-Del	Amp_Xq25	0.93	1
Xp-Del	Amp_17q23.2	0.93	1
Xp-Del	Amp_Xq21.1	0.93	1
Xp-Del	Amp_Xq25	0.93	1
Xq-Del	Amp_17q23.2	0.93	1
Xq-Del	Amp_Xq21.1	0.93	1
Xq-Del	Amp_Xq25	0.93	1
Amp_3q21.3	Del_1p31.3	0.93	1
Amp_12q23.1	Del_18q21.31	0.93	1
Amp_13q12.11	Amp_Xq21.1	0.93	1
Amp_13q12.11	Amp_Xq25	0.93	1
Amp_15q11.2	Amp_Xq21.1	0.93	1
Amp_15q11.2	Amp_Xq25	0.93	1
Amp_20q13.2	Amp_Xq21.1	0.93	1
Amp_Xp22.11	Del_18q21.31	0.93	1
Amp_Xq27.1	Del_5q21.1	0.93	1
APC	Amp_8p11.23	0.931	1
KDM6A	18p-Del	0.931	1
KDM6A	Amp_8p11.23	0.931	1
LILRB5	18p-Del	0.931	1
LILRB5	Amp_3q26.2	0.931	1
LILRB5	Amp_8p11.23	0.931	1
RAG1	18p-Del	0.931	1
RAG1	Del_10q23.31	0.931	1
18p-Del	8p-Del	0.931	1
18p-Del	Amp_16q11.2	0.931	1
8p-Del	Amp_3q26.2	0.931	1
Amp_11q13.2	Del_2q22.3	0.931	1
Del_13q22.1	Del_15q21.3	0.931	1
Amp_7q22.1	Del_9p23	0.932	1
9q-Amp	Del_18q23	0.933	1
PTEN	SLC27A4	0.934	1
8p-Del	Amp_7p14.3	0.934	1
8q-Del	Del_13q22.1	0.934	1
Del_5q21.1	Del_18q21.31	0.934	1
ANO4	EMG1	0.935	1
ANO4	LCE2D	0.935	1
ANO4	NKX3-1	0.935	1
ANO4	RPL11	0.935	1
ANO4	SMAD4	0.935	1
ANO4	ESCO1	0.935	1
ANO4	MLLT10	0.935	1
ANO4	TCEB3	0.935	1
ANO4	TCERG1	0.935	1
EMG1	MED12	0.935	1
EMG1	L1CAM	0.935	1
EMG1	LAMA3	0.935	1
EMG1	SMG7	0.935	1
EMG1	TP53BP1	0.935	1
EMG1	Amp_4q13.3	0.935	1
EMG1	Amp_Xp21.1	0.935	1
LCE2D	MED12	0.935	1
LCE2D	L1CAM	0.935	1
LCE2D	LAMA3	0.935	1
LCE2D	SMG7	0.935	1
LCE2D	Amp_4q13.3	0.935	1
LCE2D	Amp_Xp21.1	0.935	1
MED12	NKX3-1	0.935	1
MED12	RPL11	0.935	1
MED12	SMAD4	0.935	1
MED12	ESCO1	0.935	1
MED12	MLLT10	0.935	1
MED12	TCEB3	0.935	1
MED12	TCERG1	0.935	1
NKX3-1	L1CAM	0.935	1
NKX3-1	LAMA3	0.935	1
NKX3-1	SMG7	0.935	1
NKX3-1	TP53BP1	0.935	1
NKX3-1	Amp_4q13.3	0.935	1
NKX3-1	Amp_Xp21.1	0.935	1
PTEN	Del_6p25.1	0.935	1
PTEN	Del_21q22.3	0.935	1
RPL11	L1CAM	0.935	1
RPL11	LAMA3	0.935	1
RPL11	SMG7	0.935	1
RPL11	TP53BP1	0.935	1
RPL11	Amp_4q13.3	0.935	1
RPL11	Amp_Xp21.1	0.935	1
SMAD4	L1CAM	0.935	1
SMAD4	LAMA3	0.935	1
SMAD4	SMG7	0.935	1
SMAD4	TP53BP1	0.935	1
SMAD4	Amp_Xp21.1	0.935	1
ESCO1	L1CAM	0.935	1
ESCO1	LAMA3	0.935	1
ESCO1	SMG7	0.935	1
ESCO1	TP53BP1	0.935	1
ESCO1	Amp_4q13.3	0.935	1
ESCO1	Amp_Xp21.1	0.935	1
L1CAM	MLLT10	0.935	1
L1CAM	TCEB3	0.935	1
L1CAM	TCERG1	0.935	1
LAMA3	MLLT10	0.935	1
LAMA3	TCEB3	0.935	1
LAMA3	TCERG1	0.935	1
MLLT10	SMG7	0.935	1
MLLT10	TP53BP1	0.935	1
MLLT10	Amp_4q13.3	0.935	1
MLLT10	Amp_Xp21.1	0.935	1
SMG7	TCEB3	0.935	1
SMG7	TCERG1	0.935	1
TCEB3	Amp_4q13.3	0.935	1
TCEB3	Amp_Xp21.1	0.935	1
TCERG1	TP53BP1	0.935	1
TCERG1	Amp_4q13.3	0.935	1
TCERG1	Amp_Xp21.1	0.935	1
ANO4	7p-Amp	0.936	1
ATM	Del_2q22.3	0.936	1
EPB41L3	12p-Del	0.936	1
GRIA1	8p-Amp	0.936	1
GRIA1	12p-Del	0.936	1
GRIA1	Del_19q13.2	0.936	1
HRAS	16q-Del	0.936	1
LILRB5	SPOP	0.936	1
OR4P4	16q-Del	0.936	1
LAMA3	7p-Amp	0.936	1
TP53BP1	7p-Amp	0.936	1
ZNF709	16q-Del	0.936	1
1q-Amp	16q-Del	0.936	1
10p-Del	16q-Del	0.936	1
12p-Del	16q-Del	0.936	1
12p-Del	6q-Del	0.936	1
16q-Del	Amp_17q23.2	0.936	1
16q-Del	Del_10q23.31	0.936	1
16q-Del	Del_15q21.3	0.936	1
16q-Del	Del_19q13.2	0.936	1
Amp_11q13.2	Del_12q24.32	0.936	1
Amp_Xq27.1	Del_5q11.2	0.936	1
Del_2q22.3	Del_11q22.3	0.936	1
APC	KIDINS220	0.937	1
APC	EDC4	0.937	1
APC	ERN1	0.937	1
APC	FAM111A	0.937	1
APC	FAM120B	0.937	1
APC	GAGE2D	0.937	1
APC	MYOT	0.937	1
APC	POM121	0.937	1
APC	Del_1p22.1	0.937	1
APC	Del_21q22.2	0.937	1
BHLHE22	KDM6A	0.937	1
BHLHE22	LILRB5	0.937	1
BHLHE22	RAG1	0.937	1
BHLHE22	SALL1	0.937	1
BHLHE22	ZMYM3	0.937	1
BHLHE22	FAM47C	0.937	1
BHLHE22	Amp_14q21.1	0.937	1
BHLHE22	Amp_16q11.2	0.937	1
KDM6A	KIDINS220	0.937	1
KDM6A	EDC4	0.937	1
KDM6A	ERN1	0.937	1
KDM6A	FAM111A	0.937	1
KDM6A	FAM120B	0.937	1
KDM6A	GAGE2D	0.937	1
KDM6A	MYOT	0.937	1
KDM6A	POM121	0.937	1
KIDINS220	LILRB5	0.937	1
KIDINS220	RAG1	0.937	1
KIDINS220	ZMYM3	0.937	1
KIDINS220	FAM47C	0.937	1
KIDINS220	Amp_14q21.1	0.937	1
KIDINS220	Amp_16q11.2	0.937	1
LILRB5	EDC4	0.937	1
LILRB5	ERN1	0.937	1
LILRB5	FAM111A	0.937	1
LILRB5	FAM120B	0.937	1
LILRB5	GAGE2D	0.937	1
LILRB5	MYOT	0.937	1
LILRB5	POM121	0.937	1
RAG1	EDC4	0.937	1
RAG1	ERN1	0.937	1
RAG1	FAM111A	0.937	1
RAG1	FAM120B	0.937	1
RAG1	GAGE2D	0.937	1
RAG1	MYOT	0.937	1
RAG1	POM121	0.937	1
SALL1	ERN1	0.937	1
SALL1	FAM111A	0.937	1
SALL1	FAM120B	0.937	1
SALL1	GAGE2D	0.937	1
SALL1	MYOT	0.937	1
SALL1	POM121	0.937	1
ZMYM3	EDC4	0.937	1
ZMYM3	ERN1	0.937	1
ZMYM3	FAM111A	0.937	1
ZMYM3	FAM120B	0.937	1
ZMYM3	GAGE2D	0.937	1
ZMYM3	POM121	0.937	1
ZMYM3	Del_21q22.2	0.937	1
EDC4	FAM47C	0.937	1
EDC4	Amp_14q21.1	0.937	1
EDC4	Amp_16q11.2	0.937	1
ERN1	FAM47C	0.937	1
ERN1	Amp_14q21.1	0.937	1
ERN1	Amp_16q11.2	0.937	1
FAM111A	FAM47C	0.937	1
FAM111A	Amp_14q21.1	0.937	1
FAM111A	Amp_16q11.2	0.937	1
FAM120B	FAM47C	0.937	1
FAM120B	Amp_16q11.2	0.937	1
FAM47C	GAGE2D	0.937	1
FAM47C	MYOT	0.937	1
FAM47C	POM121	0.937	1
FAM47C	Del_21q22.2	0.937	1
GAGE2D	Amp_14q21.1	0.937	1
GAGE2D	Amp_16q11.2	0.937	1
MYOT	Amp_14q21.1	0.937	1
MYOT	Amp_16q11.2	0.937	1
POM121	Amp_14q21.1	0.937	1
POM121	Amp_16q11.2	0.937	1
8q-Amp	Del_5q21.1	0.937	1
16q-Del	Amp_1q22	0.937	1
Amp_14q21.1	Del_21q22.2	0.937	1
Amp_16q11.2	Del_21q22.2	0.937	1
Del_1p22.1	Del_21q22.2	0.937	1
KIDINS220	Del_12p13.1	0.938	1
MUC17	Del_11p11.2	0.938	1
EDC4	Del_12p13.1	0.938	1
ERN1	Del_12p13.1	0.938	1
FAM120B	Del_12p13.1	0.938	1
SMG7	Del_8p21.3	0.938	1
18p-Del	Del_11q22.3	0.938	1
Amp_3q26.2	Del_11q22.3	0.938	1
Amp_4q13.3	Del_8p21.3	0.938	1
Amp_8p11.23	Del_4q28.2	0.938	1
Amp_9q33.3	Del_12p13.1	0.938	1
Del_1p31.3	Del_17q21.31	0.938	1
Del_1p22.1	Del_8p21.3	0.938	1
Del_1q42.3	Del_5q11.2	0.938	1
COL11A1	Del_11p11.2	0.939	1
CTNNB1	Del_11p11.2	0.939	1
HRAS	Del_16q22.3	0.939	1
LCE2D	SPOP	0.939	1
LILRB5	Del_5q13.2	0.939	1
LMOD2	Del_16q22.3	0.939	1
OR4P4	Del_16q22.3	0.939	1
SMAD4	SPOP	0.939	1
SPOP	MLLT10	0.939	1
ZNF709	Del_16q22.3	0.939	1
7q-Amp	Amp_Xp22.11	0.939	1
9q-Amp	13q-Del	0.939	1
13q-Del	Amp_12q23.1	0.939	1
13q-Del	Amp_Xp22.11	0.939	1
13q-Del	Del_9p23	0.939	1
Amp_16q11.2	Del_5q13.2	0.939	1
Amp_Xp22.11	Del_1p31.3	0.939	1
MUC17	7p-Amp	0.94	1
NKX3-1	Del_8p23.2	0.94	1
OR4P4	Del_8p21.3	0.94	1
SMAD4	Del_8p23.2	0.94	1
CDKN1B	Del_8p21.3	0.94	1
KIRREL	Del_8p21.3	0.94	1
TCEB3	Del_8p23.2	0.94	1
22q-Del	Del_8p21.3	0.94	1
Del_6q14.3	Del_18q23	0.94	1
ANO4	MUC17	0.941	1
ANO4	Amp_7p14.3	0.941	1
EMG1	Del_3p13	0.941	1
EMG1	Del_5q13.2	0.941	1
LCE2D	Del_5q13.2	0.941	1
MED12	MUC17	0.941	1
MUC17	L1CAM	0.941	1
MUC17	LAMA3	0.941	1
NKX3-1	Del_3p13	0.941	1
OR4P4	Del_17p13.1	0.941	1
RPL11	Del_3p13	0.941	1
SMAD4	Del_3p13	0.941	1
SMAD4	Del_5q13.2	0.941	1
CR1L	Del_17p13.1	0.941	1
ESCO1	Del_5q13.2	0.941	1
L1CAM	Amp_7p14.3	0.941	1
LAMA3	Amp_7p14.3	0.941	1
MLLT10	Del_5q13.2	0.941	1
TCEB3	Del_5q13.2	0.941	1
TCERG1	Del_5q13.2	0.941	1
TP53BP1	Amp_7p14.3	0.941	1
22q-Del	Del_17p13.1	0.941	1
Amp_11q13.2	Del_13q14.13	0.941	1
Amp_12q23.1	Del_16q22.3	0.941	1
Amp_Xq25	Del_17p13.1	0.941	1
Del_18q21.31	Del_21q22.3	0.941	1
APC	Amp_3q21.3	0.942	1
APC	Del_11q22.3	0.942	1
ATM	LILRB5	0.942	1
HRAS	IDH1	0.942	1
HRAS	LMOD2	0.942	1
HRAS	OR4P4	0.942	1
HRAS	CDKN1B	0.942	1
HRAS	CR1L	0.942	1
HRAS	EHHADH	0.942	1
HRAS	KIRREL	0.942	1
HRAS	ZNF709	0.942	1
HRAS	1q-Amp	0.942	1
HRAS	10p-Del	0.942	1
HRAS	22q-Del	0.942	1
HRAS	Amp_17q23.2	0.942	1
HRAS	Amp_Xq21.1	0.942	1
HRAS	Amp_Xq25	0.942	1
IDH1	LMOD2	0.942	1
IDH1	OR4P4	0.942	1
IDH1	CDKN1B	0.942	1
IDH1	CR1L	0.942	1
IDH1	EHHADH	0.942	1
IDH1	KIRREL	0.942	1
IDH1	ZNF709	0.942	1
IDH1	1q-Amp	0.942	1
IDH1	10p-Del	0.942	1
IDH1	22q-Del	0.942	1
IDH1	Amp_17q23.2	0.942	1
IDH1	Amp_Xq21.1	0.942	1
IDH1	Amp_Xq25	0.942	1
KDM6A	Del_4q28.2	0.942	1
KDM6A	Del_11q22.3	0.942	1
LILRB5	Amp_3q21.3	0.942	1
LMOD2	OR4P4	0.942	1
LMOD2	CDKN1B	0.942	1
LMOD2	CR1L	0.942	1
LMOD2	EHHADH	0.942	1
LMOD2	KIRREL	0.942	1
LMOD2	ZNF709	0.942	1
LMOD2	10p-Del	0.942	1
LMOD2	22q-Del	0.942	1
LMOD2	Amp_17q23.2	0.942	1
LMOD2	Amp_Xq21.1	0.942	1
LMOD2	Amp_Xq25	0.942	1
LMOD2	Del_2q22.3	0.942	1
OR4P4	CDKN1B	0.942	1
OR4P4	CR1L	0.942	1
OR4P4	EHHADH	0.942	1
OR4P4	KIRREL	0.942	1
OR4P4	ZNF709	0.942	1
OR4P4	1q-Amp	0.942	1
OR4P4	22q-Del	0.942	1
OR4P4	Amp_17q23.2	0.942	1
OR4P4	Amp_Xq21.1	0.942	1
OR4P4	Amp_Xq25	0.942	1
OR4P4	Del_2q22.3	0.942	1
SALL1	Amp_3q21.3	0.942	1
SALL1	Del_11q22.3	0.942	1
ZMYM3	Del_11q22.3	0.942	1
CDKN1B	CR1L	0.942	1
CDKN1B	KIRREL	0.942	1
CDKN1B	22q-Del	0.942	1
CDKN1B	Amp_17q23.2	0.942	1
CDKN1B	Amp_Xq21.1	0.942	1
CDKN1B	Amp_Xq25	0.942	1
CR1L	EHHADH	0.942	1
CR1L	ZNF709	0.942	1
CR1L	1q-Amp	0.942	1
CR1L	10p-Del	0.942	1
CR1L	22q-Del	0.942	1
CR1L	Amp_17q23.2	0.942	1
CR1L	Amp_Xq21.1	0.942	1
CR1L	Amp_Xq25	0.942	1
EHHADH	KIRREL	0.942	1
EHHADH	ZNF709	0.942	1
EHHADH	1q-Amp	0.942	1
EHHADH	10p-Del	0.942	1
EHHADH	22q-Del	0.942	1
EHHADH	Amp_17q23.2	0.942	1
EHHADH	Amp_Xq21.1	0.942	1
EHHADH	Amp_Xq25	0.942	1
EHHADH	Del_2q22.3	0.942	1
KIRREL	ZNF709	0.942	1
KIRREL	1q-Amp	0.942	1
KIRREL	10p-Del	0.942	1
KIRREL	22q-Del	0.942	1
KIRREL	Amp_17q23.2	0.942	1
KIRREL	Amp_Xq21.1	0.942	1
KIRREL	Amp_Xq25	0.942	1
KIRREL	Del_2q22.3	0.942	1
ZNF709	1q-Amp	0.942	1
ZNF709	10p-Del	0.942	1
ZNF709	22q-Del	0.942	1
ZNF709	Amp_17q23.2	0.942	1
ZNF709	Amp_Xq21.1	0.942	1
ZNF709	Amp_Xq25	0.942	1
1q-Amp	22q-Del	0.942	1
1q-Amp	Amp_17q23.2	0.942	1
1q-Amp	Amp_Xq21.1	0.942	1
1q-Amp	Amp_Xq25	0.942	1
7q-Amp	Del_16q22.3	0.942	1
10p-Del	22q-Del	0.942	1
10p-Del	Amp_17q23.2	0.942	1
10p-Del	Amp_Xq21.1	0.942	1
10p-Del	Amp_Xq25	0.942	1
10p-Del	Del_2q22.3	0.942	1
22q-Del	Amp_Xq21.1	0.942	1
6q-Del	Del_16q24.1	0.942	1
Amp_17q23.2	Amp_Xq21.1	0.942	1
Amp_Xq21.1	Del_2q22.3	0.942	1
Del_5q11.2	Del_9p23	0.942	1
Del_5q11.2	Del_19q13.2	0.942	1
ZFHX3	Del_6p25.1	0.943	1
Amp_Xp22.11	Del_17p13.1	0.943	1
ANO4	Amp_8q24.21	0.944	1
BHLHE22	BRAF	0.944	1
BHLHE22	9q-Amp	0.944	1
BHLHE22	Amp_Xp22.11	0.944	1
BHLHE22	Amp_Xq27.1	0.944	1
BRAF	KIDINS220	0.944	1
BRAF	EDC4	0.944	1
BRAF	FAM111A	0.944	1
BRAF	FAM120B	0.944	1
BRAF	GAGE2D	0.944	1
BRAF	POM121	0.944	1
EMG1	NTM	0.944	1
EMG1	OR4D5	0.944	1
EMG1	BMP2K	0.944	1
EMG1	CNTNAP1	0.944	1
EMG1	MED15	0.944	1
EMG1	RPTN	0.944	1
EMG1	TNRC18	0.944	1
EMG1	3p-Amp	0.944	1
EMG1	10q-Del	0.944	1
EMG1	8q-Del	0.944	1
EMG1	Xp-Del	0.944	1
EMG1	Xq-Del	0.944	1
EMG1	Amp_13q12.11	0.944	1
EMG1	Amp_15q11.2	0.944	1
EMG1	Amp_20q13.2	0.944	1
KIDINS220	9q-Amp	0.944	1
KIDINS220	Amp_12q23.1	0.944	1
KIDINS220	Amp_Xp22.11	0.944	1
KIDINS220	Amp_Xq27.1	0.944	1
LCE2D	NTM	0.944	1
LCE2D	OR4D5	0.944	1
LCE2D	BMP2K	0.944	1
LCE2D	CNTNAP1	0.944	1
LCE2D	MED15	0.944	1
LCE2D	RPTN	0.944	1
LCE2D	TNRC18	0.944	1
LCE2D	3p-Amp	0.944	1
LCE2D	10q-Del	0.944	1
LCE2D	8q-Del	0.944	1
LCE2D	Xp-Del	0.944	1
LCE2D	Xq-Del	0.944	1
LCE2D	Amp_13q12.11	0.944	1
LCE2D	Amp_15q11.2	0.944	1
LCE2D	Amp_20q13.2	0.944	1
NKX3-1	NTM	0.944	1
NKX3-1	OR4D5	0.944	1
NKX3-1	BMP2K	0.944	1
NKX3-1	CNTNAP1	0.944	1
NKX3-1	MED15	0.944	1
NKX3-1	RPTN	0.944	1
NKX3-1	TNRC18	0.944	1
NKX3-1	3p-Amp	0.944	1
NKX3-1	10q-Del	0.944	1
NKX3-1	8q-Del	0.944	1
NKX3-1	Xp-Del	0.944	1
NKX3-1	Xq-Del	0.944	1
NKX3-1	Amp_13q12.11	0.944	1
NKX3-1	Amp_15q11.2	0.944	1
NKX3-1	Amp_20q13.2	0.944	1
NTM	RPL11	0.944	1
NTM	SMAD4	0.944	1
NTM	ESCO1	0.944	1
NTM	MLLT10	0.944	1
NTM	TCEB3	0.944	1
NTM	TCERG1	0.944	1
OR4D5	RPL11	0.944	1
OR4D5	SMAD4	0.944	1
OR4D5	ESCO1	0.944	1
OR4D5	TCEB3	0.944	1
OR4D5	TCERG1	0.944	1
RPL11	BMP2K	0.944	1
RPL11	CNTNAP1	0.944	1
RPL11	MED15	0.944	1
RPL11	RPTN	0.944	1
RPL11	TNRC18	0.944	1
RPL11	3p-Amp	0.944	1
RPL11	10q-Del	0.944	1
RPL11	8q-Del	0.944	1
RPL11	Xp-Del	0.944	1
RPL11	Xq-Del	0.944	1
RPL11	Amp_13q12.11	0.944	1
RPL11	Amp_15q11.2	0.944	1
RPL11	Amp_20q13.2	0.944	1
SLC27A4	Amp_11q13.2	0.944	1
SMAD4	BMP2K	0.944	1
SMAD4	CNTNAP1	0.944	1
SMAD4	MED15	0.944	1
SMAD4	RPTN	0.944	1
SMAD4	TNRC18	0.944	1
SMAD4	3p-Amp	0.944	1
SMAD4	10q-Del	0.944	1
SMAD4	8q-Del	0.944	1
SMAD4	Amp_13q12.11	0.944	1
SMAD4	Amp_15q11.2	0.944	1
SMAD4	Amp_20q13.2	0.944	1
TP53	Amp_9q33.3	0.944	1
BMP2K	ESCO1	0.944	1
BMP2K	MLLT10	0.944	1
BMP2K	TCEB3	0.944	1
BMP2K	TCERG1	0.944	1
CNTNAP1	ESCO1	0.944	1
CNTNAP1	MLLT10	0.944	1
CNTNAP1	TCEB3	0.944	1
CNTNAP1	TCERG1	0.944	1
EDC4	9q-Amp	0.944	1
EDC4	Amp_12q23.1	0.944	1
EDC4	Amp_Xp22.11	0.944	1
EDC4	Amp_Xq27.1	0.944	1
ERN1	9q-Amp	0.944	1
ERN1	Amp_12q23.1	0.944	1
ERN1	Amp_Xp22.11	0.944	1
ERN1	Amp_Xq27.1	0.944	1
ESCO1	MED15	0.944	1
ESCO1	TNRC18	0.944	1
ESCO1	3p-Amp	0.944	1
ESCO1	10q-Del	0.944	1
ESCO1	8q-Del	0.944	1
ESCO1	Xp-Del	0.944	1
ESCO1	Xq-Del	0.944	1
ESCO1	Amp_13q12.11	0.944	1
ESCO1	Amp_15q11.2	0.944	1
ESCO1	Amp_20q13.2	0.944	1
FAM111A	9q-Amp	0.944	1
FAM111A	Amp_12q23.1	0.944	1
FAM111A	Amp_Xp22.11	0.944	1
FAM111A	Amp_Xq27.1	0.944	1
FAM120B	9q-Amp	0.944	1
FAM120B	Amp_12q23.1	0.944	1
FAM120B	Amp_Xp22.11	0.944	1
FAM120B	Amp_Xq27.1	0.944	1
GAGE2D	9q-Amp	0.944	1
GAGE2D	Amp_12q23.1	0.944	1
GAGE2D	Amp_Xp22.11	0.944	1
GAGE2D	Amp_Xq27.1	0.944	1
LAMA3	Amp_8q24.21	0.944	1
MED15	MLLT10	0.944	1
MED15	TCEB3	0.944	1
MED15	TCERG1	0.944	1
MLLT10	RPTN	0.944	1
MLLT10	TNRC18	0.944	1
MLLT10	3p-Amp	0.944	1
MLLT10	10q-Del	0.944	1
MLLT10	8q-Del	0.944	1
MLLT10	Xp-Del	0.944	1
MLLT10	Xq-Del	0.944	1
MLLT10	Amp_13q12.11	0.944	1
MLLT10	Amp_15q11.2	0.944	1
MLLT10	Amp_20q13.2	0.944	1
MYOT	9q-Amp	0.944	1
MYOT	Amp_12q23.1	0.944	1
MYOT	Amp_Xp22.11	0.944	1
MYOT	Amp_Xq27.1	0.944	1
POM121	9q-Amp	0.944	1
POM121	Amp_12q23.1	0.944	1
POM121	Amp_Xp22.11	0.944	1
POM121	Amp_Xq27.1	0.944	1
RPTN	TCEB3	0.944	1
RPTN	TCERG1	0.944	1
SMG7	Amp_8q24.21	0.944	1
TCEB3	TNRC18	0.944	1
TCEB3	3p-Amp	0.944	1
TCEB3	10q-Del	0.944	1
TCEB3	8q-Del	0.944	1
TCEB3	Xp-Del	0.944	1
TCEB3	Xq-Del	0.944	1
TCEB3	Amp_13q12.11	0.944	1
TCEB3	Amp_15q11.2	0.944	1
TCEB3	Amp_20q13.2	0.944	1
TCERG1	TNRC18	0.944	1
TCERG1	3p-Amp	0.944	1
TCERG1	10q-Del	0.944	1
TCERG1	8q-Del	0.944	1
TCERG1	Xp-Del	0.944	1
TCERG1	Xq-Del	0.944	1
TCERG1	Amp_13q12.11	0.944	1
TCERG1	Amp_15q11.2	0.944	1
TCERG1	Amp_20q13.2	0.944	1
TP53BP1	Amp_8q24.21	0.944	1
8q-Amp	Del_18q23	0.944	1
9q-Amp	18p-Del	0.944	1
9q-Amp	Amp_8p11.23	0.944	1
18p-Del	Amp_12q23.1	0.944	1
Amp_3q26.2	Amp_12q23.1	0.944	1
Amp_3q26.2	Amp_Xq27.1	0.944	1
Amp_7q22.1	Del_8p23.2	0.944	1
Amp_8p11.23	Amp_12q23.1	0.944	1
Amp_8q24.21	Amp_Xp21.1	0.944	1
Del_5q13.2	Del_10q23.31	0.944	1
Del_8p21.3	Del_11q23.2	0.944	1
COL11A1	Del_2q22.3	0.945	1
HRAS	18q-Del	0.945	1
IDH1	18q-Del	0.945	1
OR4P4	18q-Del	0.945	1
PIK3CA	Del_2q22.3	0.945	1
L1CAM	17p-Del	0.945	1
SMG7	17p-Del	0.945	1
SMG7	Del_1q42.3	0.945	1
TP53BP1	Del_1q42.3	0.945	1
1q-Amp	18q-Del	0.945	1
17p-Del	Amp_4q13.3	0.945	1
17p-Del	Amp_Xp21.1	0.945	1
18q-Del	Amp_Xq21.1	0.945	1
Amp_4q13.3	Del_1q42.3	0.945	1
Amp_11q13.2	Del_5q21.1	0.945	1
Del_11q22.3	Del_21q22.2	0.945	1
COL11A1	Amp_9q33.3	0.946	1
EMG1	Del_17q21.31	0.946	1
LCE2D	Del_13q14.13	0.946	1
LCE2D	Del_17q21.31	0.946	1
PIK3CA	Del_12q24.32	0.946	1
RAG1	TP53	0.946	1
RAG1	Del_17q21.31	0.946	1
RPL11	Del_17q21.31	0.946	1
TP53	MLLT10	0.946	1
TP53	TCEB3	0.946	1
TP53	TCERG1	0.946	1
TP53	Amp_14q21.1	0.946	1
ZMYM3	Del_17q21.31	0.946	1
TCEB3	Del_17q21.31	0.946	1
TCERG1	Del_17q21.31	0.946	1
12p-Del	Amp_8p11.23	0.946	1
8p-Del	Del_1p22.1	0.946	1
Amp_1q22	Del_12q24.32	0.946	1
Amp_16q11.2	Del_17q21.31	0.946	1
COL11A1	Del_16q22.3	0.947	1
KDM6A	Del_13q14.13	0.947	1
LILRB5	Del_13q14.13	0.947	1
MUC17	Del_12q24.32	0.947	1
RAG1	Del_13q14.13	0.947	1
TP53	Del_2q22.3	0.947	1
ZMYM3	Del_13q14.13	0.947	1
LAMA3	Amp_8q22.1	0.947	1
SMG7	Amp_8q22.1	0.947	1
3q-Amp	Del_16q22.3	0.947	1
12p-Del	Del_16q22.3	0.947	1
Amp_8q22.1	Amp_Xp21.1	0.947	1
Del_4q28.2	Del_12p13.1	0.947	1
Del_9p23	Del_16q22.3	0.947	1
Del_10q23.31	Del_16q22.3	0.947	1
APC	12p-Del	0.948	1
APC	Del_9p23	0.948	1
APC	Del_19q13.2	0.948	1
COL11A1	SLC27A4	0.948	1
CTNNB1	SLC27A4	0.948	1
LILRB5	8p-Amp	0.948	1
LILRB5	12p-Del	0.948	1
PIK3CA	SLC27A4	0.948	1
PTEN	Del_3p13	0.948	1
RAG1	8p-Amp	0.948	1
RAG1	Del_9p23	0.948	1
SALL1	12p-Del	0.948	1
SLC27A4	3q-Amp	0.948	1
SLC27A4	Amp_1q22	0.948	1
ZMYM3	Del_15q21.3	0.948	1
FAM47C	Del_19q13.2	0.948	1
7p-Amp	17p-Del	0.948	1
8p-Amp	Amp_16q11.2	0.948	1
Amp_16q11.2	Del_9p23	0.948	1
Amp_16q11.2	Del_15q21.3	0.948	1
Amp_16q11.2	Del_19q13.2	0.948	1
BRAF	Del_1p22.1	0.949	1
EMG1	Del_2q22.1	0.949	1
GRIA1	Del_11p11.2	0.949	1
KDM6A	Del_2q22.1	0.949	1
KDM6A	Del_13q22.1	0.949	1
LILRB5	Del_2q22.1	0.949	1
LILRB5	Del_13q22.1	0.949	1
NKX3-1	Del_2q22.1	0.949	1
PIK3CA	18q-Del	0.949	1
RAG1	Del_13q22.1	0.949	1
SMAD4	Del_2q22.1	0.949	1
LAMA3	Amp_7q22.1	0.949	1
TCERG1	Del_2q22.1	0.949	1
9q-Amp	Del_1p22.1	0.949	1
9q-Amp	Del_21q22.2	0.949	1
18q-Del	Amp_1q22	0.949	1
Amp_7q22.1	Amp_Xp21.1	0.949	1
Amp_12q23.1	Del_21q22.2	0.949	1
Amp_Xq27.1	Del_1p22.1	0.949	1
Amp_Xq27.1	Del_21q22.2	0.949	1
Del_1p22.1	Del_3p13	0.949	1
Del_3p13	Del_16q22.3	0.949	1
BHLHE22	Amp_8q24.21	0.95	1
COL11A1	Del_17p13.1	0.95	1
PIK3CA	Del_17p13.1	0.95	1
ERN1	Amp_8q24.21	0.95	1
FAM120B	Amp_8q24.21	0.95	1
8p-Del	Amp_11q13.2	0.95	1
Amp_3q21.3	Del_16q24.1	0.95	1
Amp_8p11.23	Del_13q22.1	0.95	1
ANO4	BHLHE22	0.951	1
ANO4	EDC4	0.951	1
ANO4	ERN1	0.951	1
ANO4	FAM111A	0.951	1
ANO4	FAM120B	0.951	1
ANO4	GAGE2D	0.951	1
ANO4	MYOT	0.951	1
ANO4	POM121	0.951	1
BHLHE22	MED12	0.951	1
BHLHE22	L1CAM	0.951	1
BHLHE22	LAMA3	0.951	1
BHLHE22	SMG7	0.951	1
BHLHE22	TP53BP1	0.951	1
BHLHE22	Amp_4q13.3	0.951	1
BHLHE22	Amp_Xp21.1	0.951	1
EMG1	8q-Amp	0.951	1
FOXA1	16q-Del	0.951	1
KIDINS220	MED12	0.951	1
KIDINS220	L1CAM	0.951	1
KIDINS220	SMG7	0.951	1
KIDINS220	TP53BP1	0.951	1
KIDINS220	Amp_4q13.3	0.951	1
KIDINS220	Amp_Xp21.1	0.951	1
MED12	EDC4	0.951	1
MED12	ERN1	0.951	1
MED12	FAM111A	0.951	1
MED12	FAM120B	0.951	1
MED12	GAGE2D	0.951	1
MED12	MYOT	0.951	1
MED12	POM121	0.951	1
EDC4	L1CAM	0.951	1
EDC4	LAMA3	0.951	1
EDC4	SMG7	0.951	1
EDC4	TP53BP1	0.951	1
EDC4	Amp_4q13.3	0.951	1
EDC4	Amp_Xp21.1	0.951	1
ERN1	L1CAM	0.951	1
ERN1	SMG7	0.951	1
ERN1	TP53BP1	0.951	1
ERN1	Amp_4q13.3	0.951	1
ERN1	Amp_Xp21.1	0.951	1
FAM111A	L1CAM	0.951	1
FAM111A	LAMA3	0.951	1
FAM111A	SMG7	0.951	1
FAM111A	TP53BP1	0.951	1
FAM111A	Amp_4q13.3	0.951	1
FAM111A	Amp_Xp21.1	0.951	1
FAM120B	L1CAM	0.951	1
FAM120B	LAMA3	0.951	1
FAM120B	SMG7	0.951	1
FAM120B	TP53BP1	0.951	1
FAM120B	Amp_4q13.3	0.951	1
FAM120B	Amp_Xp21.1	0.951	1
GAGE2D	L1CAM	0.951	1
GAGE2D	LAMA3	0.951	1
GAGE2D	SMG7	0.951	1
GAGE2D	TP53BP1	0.951	1
GAGE2D	Amp_4q13.3	0.951	1
GAGE2D	Amp_Xp21.1	0.951	1
L1CAM	POM121	0.951	1
LAMA3	MYOT	0.951	1
MLLT10	8q-Amp	0.951	1
MYOT	Amp_4q13.3	0.951	1
MYOT	Amp_Xp21.1	0.951	1
POM121	SMG7	0.951	1
POM121	TP53BP1	0.951	1
POM121	Amp_4q13.3	0.951	1
POM121	Amp_Xp21.1	0.951	1
SMG7	Del_6q14.3	0.951	1
ZFHX3	Del_6q14.3	0.951	1
12p-Del	18q-Del	0.951	1
16q-Del	Del_1q42.3	0.951	1
Amp_4q13.3	Del_6q14.3	0.951	1
Del_5q21.1	Del_16q24.1	0.951	1
ANO4	Del_18q21.31	0.952	1
BHLHE22	Amp_8q22.1	0.952	1
KDM6A	8q-Amp	0.952	1
NTM	Del_12p13.1	0.952	1
OR4P4	Del_10q23.31	0.952	1
PIK3CA	PTEN	0.952	1
SALL1	8q-Amp	0.952	1
CR1L	Del_10q23.31	0.952	1
EDC4	Amp_8q22.1	0.952	1
FAM120B	Amp_8q22.1	0.952	1
KIRREL	Del_10q23.31	0.952	1
L1CAM	Del_18q21.31	0.952	1
TP53BP1	Del_5q21.1	0.952	1
ZNF709	Del_10q23.31	0.952	1
8p-Amp	Del_1p22.1	0.952	1
10q-Del	Del_12p13.1	0.952	1
22q-Del	Del_10q23.31	0.952	1
8q-Del	Del_12p13.1	0.952	1
Amp_3q21.3	Del_11q22.3	0.952	1
Amp_17q23.2	Del_10q23.31	0.952	1
Amp_Xq25	Del_10q23.31	0.952	1
Del_1p22.1	Del_15q21.3	0.952	1
Del_9p23	Del_21q22.2	0.952	1
ANO4	Del_1p31.3	0.953	1
BHLHE22	Del_8p21.3	0.953	1
EMG1	HRAS	0.953	1
EMG1	IDH1	0.953	1
EMG1	LMOD2	0.953	1
EMG1	OR4P4	0.953	1
EMG1	CDKN1B	0.953	1
EMG1	CR1L	0.953	1
EMG1	EHHADH	0.953	1
EMG1	KIRREL	0.953	1
EMG1	ZNF709	0.953	1
EMG1	1q-Amp	0.953	1
EMG1	10p-Del	0.953	1
EMG1	22q-Del	0.953	1
EMG1	Amp_17q23.2	0.953	1
EMG1	Amp_Xq21.1	0.953	1
EMG1	Amp_Xq25	0.953	1
EPB41L3	SLC27A4	0.953	1
EPB41L3	Del_21q22.3	0.953	1
FOXA1	Amp_9q33.3	0.953	1
GRIA1	SLC27A4	0.953	1
HRAS	LCE2D	0.953	1
HRAS	NKX3-1	0.953	1
HRAS	RPL11	0.953	1
HRAS	SMAD4	0.953	1
HRAS	ESCO1	0.953	1
HRAS	MLLT10	0.953	1
HRAS	TCEB3	0.953	1
HRAS	TCERG1	0.953	1
IDH1	LCE2D	0.953	1
IDH1	NKX3-1	0.953	1
IDH1	SMAD4	0.953	1
IDH1	ESCO1	0.953	1
IDH1	MLLT10	0.953	1
IDH1	TCEB3	0.953	1
IDH1	TCERG1	0.953	1
LCE2D	LMOD2	0.953	1
LCE2D	OR4P4	0.953	1
LCE2D	CDKN1B	0.953	1
LCE2D	EHHADH	0.953	1
LCE2D	KIRREL	0.953	1
LCE2D	ZNF709	0.953	1
LCE2D	1q-Amp	0.953	1
LCE2D	10p-Del	0.953	1
LCE2D	22q-Del	0.953	1
LCE2D	Amp_17q23.2	0.953	1
LCE2D	Amp_Xq21.1	0.953	1
LCE2D	Amp_Xq25	0.953	1
LMOD2	NKX3-1	0.953	1
LMOD2	RPL11	0.953	1
LMOD2	SMAD4	0.953	1
LMOD2	ESCO1	0.953	1
LMOD2	MLLT10	0.953	1
LMOD2	TCEB3	0.953	1
LMOD2	TCERG1	0.953	1
NKX3-1	OR4P4	0.953	1
NKX3-1	CDKN1B	0.953	1
NKX3-1	CR1L	0.953	1
NKX3-1	EHHADH	0.953	1
NKX3-1	KIRREL	0.953	1
NKX3-1	ZNF709	0.953	1
NKX3-1	1q-Amp	0.953	1
NKX3-1	10p-Del	0.953	1
NKX3-1	22q-Del	0.953	1
NKX3-1	Amp_17q23.2	0.953	1
NKX3-1	Amp_Xq25	0.953	1
OR4P4	RPL11	0.953	1
OR4P4	SMAD4	0.953	1
OR4P4	ESCO1	0.953	1
OR4P4	MLLT10	0.953	1
OR4P4	TCEB3	0.953	1
OR4P4	TCERG1	0.953	1
PTEN	Del_12p13.1	0.953	1
RPL11	CDKN1B	0.953	1
RPL11	CR1L	0.953	1
RPL11	EHHADH	0.953	1
RPL11	KIRREL	0.953	1
RPL11	ZNF709	0.953	1
RPL11	1q-Amp	0.953	1
RPL11	10p-Del	0.953	1
RPL11	22q-Del	0.953	1
RPL11	Amp_17q23.2	0.953	1
RPL11	Amp_Xq21.1	0.953	1
RPL11	Amp_Xq25	0.953	1
SLC27A4	6q-Del	0.953	1
SMAD4	CDKN1B	0.953	1
SMAD4	CR1L	0.953	1
SMAD4	EHHADH	0.953	1
SMAD4	KIRREL	0.953	1
SMAD4	ZNF709	0.953	1
SMAD4	1q-Amp	0.953	1
SMAD4	10p-Del	0.953	1
SMAD4	Amp_17q23.2	0.953	1
SMAD4	Amp_Xq21.1	0.953	1
SMAD4	Amp_Xq25	0.953	1
CDKN1B	ESCO1	0.953	1
CDKN1B	MLLT10	0.953	1
CDKN1B	TCEB3	0.953	1
CDKN1B	TCERG1	0.953	1
CR1L	ESCO1	0.953	1
CR1L	TCEB3	0.953	1
CR1L	TCERG1	0.953	1
EHHADH	ESCO1	0.953	1
EHHADH	MLLT10	0.953	1
EHHADH	TCEB3	0.953	1
EHHADH	TCERG1	0.953	1
ESCO1	KIRREL	0.953	1
ESCO1	ZNF709	0.953	1
ESCO1	1q-Amp	0.953	1
ESCO1	10p-Del	0.953	1
ESCO1	22q-Del	0.953	1
ESCO1	Amp_17q23.2	0.953	1
ESCO1	Amp_Xq21.1	0.953	1
ESCO1	Amp_Xq25	0.953	1
FAM120B	Del_8p21.3	0.953	1
KIRREL	MLLT10	0.953	1
KIRREL	TCEB3	0.953	1
KIRREL	TCERG1	0.953	1
LAMA3	7q-Amp	0.953	1
LAMA3	Del_11q23.2	0.953	1
MLLT10	ZNF709	0.953	1
MLLT10	1q-Amp	0.953	1
MLLT10	10p-Del	0.953	1
MLLT10	22q-Del	0.953	1
MLLT10	Amp_17q23.2	0.953	1
MYOT	Del_8p21.3	0.953	1
SMG7	13q-Del	0.953	1
TCEB3	ZNF709	0.953	1
TCEB3	1q-Amp	0.953	1
TCEB3	10p-Del	0.953	1
TCEB3	22q-Del	0.953	1
TCEB3	Amp_17q23.2	0.953	1
TCEB3	Amp_Xq25	0.953	1
TCERG1	ZNF709	0.953	1
TCERG1	1q-Amp	0.953	1
TCERG1	10p-Del	0.953	1
TCERG1	22q-Del	0.953	1
TCERG1	Amp_17q23.2	0.953	1
TCERG1	Amp_Xq21.1	0.953	1
TCERG1	Amp_Xq25	0.953	1
TP53BP1	7q-Amp	0.953	1
TP53BP1	13q-Del	0.953	1
TP53BP1	Del_11q23.2	0.953	1
7p-Amp	10q-Del	0.953	1
7p-Amp	8q-Del	0.953	1
13q-Del	Amp_Xp21.1	0.953	1
18p-Del	Amp_8q22.1	0.953	1
Amp_4q13.3	Del_1p31.3	0.953	1
Amp_4q13.3	Del_11q23.2	0.953	1
Amp_Xp21.1	Del_11q23.2	0.953	1
Del_1q42.3	Del_12q24.32	0.953	1
Del_3p13	Del_17p13.1	0.953	1
ANO4	Del_18q23	0.954	1
ATM	9q-Amp	0.954	1
ATM	Amp_Xp22.11	0.954	1
ATM	Amp_Xq27.1	0.954	1
MUC17	17p-Del	0.954	1
MUC17	Del_13q22.1	0.954	1
L1CAM	Del_18q23	0.954	1
7q-Amp	Del_16q24.1	0.954	1
9q-Amp	Del_11q22.3	0.954	1
17p-Del	Amp_7p14.3	0.954	1
18q-Del	Del_17q21.31	0.954	1
Amp_3q21.3	Amp_Xp22.11	0.954	1
Amp_12q23.1	Del_4q28.2	0.954	1
Amp_15q11.2	Del_8p23.2	0.954	1
Del_1p31.3	Del_16q24.1	0.954	1
BHLHE22	Del_5q21.1	0.955	1
EPB41L3	Amp_9q33.3	0.955	1
HRAS	8p-Del	0.955	1
KIDINS220	Del_5q21.1	0.955	1
KIDINS220	Del_18q21.31	0.955	1
CDKN1B	8p-Del	0.955	1
EDC4	Del_5q21.1	0.955	1
ERN1	Del_5q21.1	0.955	1
FAM111A	Del_18q21.31	0.955	1
MYOT	Del_5q21.1	0.955	1
MYOT	Del_18q21.31	0.955	1
1q-Amp	8p-Del	0.955	1
6q-Del	Amp_9q33.3	0.955	1
8p-Del	Amp_Xq21.1	0.955	1
Del_1p31.3	Del_11p11.2	0.955	1
COL11A1	Del_8p23.2	0.956	1
MUC17	SPOP	0.956	1
MUC17	MED15	0.956	1
MUC17	3p-Amp	0.956	1
MUC17	Amp_20q13.2	0.956	1
NTM	Amp_7p14.3	0.956	1
CNTNAP1	Amp_7p14.3	0.956	1
LAMA3	Del_5q11.2	0.956	1
TP53BP1	Del_5q11.2	0.956	1
3q-Amp	Del_8p23.2	0.956	1
10q-Del	Amp_7p14.3	0.956	1
8q-Del	Amp_7p14.3	0.956	1
Amp_4q13.3	Del_5q11.2	0.956	1
Amp_7p14.3	Amp_15q11.2	0.956	1
Amp_8p11.23	Del_16q22.3	0.956	1
Amp_12q23.1	Del_5q13.2	0.956	1
Amp_Xq27.1	Del_10q23.31	0.956	1
Del_1p22.1	Del_13q14.13	0.956	1
ANO4	Amp_3q26.2	0.957	1
KIDINS220	Del_18q23	0.957	1
PTEN	Del_17p13.1	0.957	1
FAM111A	Del_18q23	0.957	1
LAMA3	18p-Del	0.957	1
LAMA3	Amp_8p11.23	0.957	1
MYOT	Del_18q23	0.957	1
TP53BP1	Amp_3q26.2	0.957	1
TP53BP1	Amp_8p11.23	0.957	1
8q-Amp	18p-Del	0.957	1
8q-Amp	Amp_3q26.2	0.957	1
18p-Del	Amp_4q13.3	0.957	1
Amp_8q24.21	Del_18q21.31	0.957	1
APC	SLC27A4	0.958	1
ATM	Del_5q13.2	0.958	1
ATM	Del_9p23	0.958	1
BHLHE22	NTM	0.958	1
BHLHE22	OR4D5	0.958	1
BHLHE22	BMP2K	0.958	1
BHLHE22	CNTNAP1	0.958	1
BHLHE22	MED15	0.958	1
BHLHE22	RPTN	0.958	1
BHLHE22	TNRC18	0.958	1
BHLHE22	3p-Amp	0.958	1
BHLHE22	10q-Del	0.958	1
BHLHE22	8q-Del	0.958	1
BHLHE22	Xp-Del	0.958	1
BHLHE22	Xq-Del	0.958	1
BHLHE22	Amp_13q12.11	0.958	1
BHLHE22	Amp_15q11.2	0.958	1
BHLHE22	Amp_20q13.2	0.958	1
BHLHE22	Del_5q11.2	0.958	1
BRAF	8p-Amp	0.958	1
COL11A1	Del_6p25.1	0.958	1
CTNNB1	ZFHX3	0.958	1
GRIA1	Del_2q22.3	0.958	1
KDM6A	SLC27A4	0.958	1
KDM6A	Del_11p11.2	0.958	1
KIDINS220	NTM	0.958	1
KIDINS220	OR4D5	0.958	1
KIDINS220	BMP2K	0.958	1
KIDINS220	CNTNAP1	0.958	1
KIDINS220	MED15	0.958	1
KIDINS220	RPTN	0.958	1
KIDINS220	TNRC18	0.958	1
KIDINS220	3p-Amp	0.958	1
KIDINS220	10q-Del	0.958	1
KIDINS220	8q-Del	0.958	1
KIDINS220	Xp-Del	0.958	1
KIDINS220	Xq-Del	0.958	1
KIDINS220	Amp_13q12.11	0.958	1
KIDINS220	Amp_15q11.2	0.958	1
KIDINS220	Amp_20q13.2	0.958	1
LILRB5	SLC27A4	0.958	1
NTM	EDC4	0.958	1
NTM	ERN1	0.958	1
NTM	FAM111A	0.958	1
NTM	FAM120B	0.958	1
NTM	GAGE2D	0.958	1
NTM	MYOT	0.958	1
NTM	POM121	0.958	1
OR4D5	EDC4	0.958	1
OR4D5	ERN1	0.958	1
OR4D5	FAM111A	0.958	1
OR4D5	FAM120B	0.958	1
OR4D5	GAGE2D	0.958	1
OR4D5	MYOT	0.958	1
OR4D5	POM121	0.958	1
RAG1	SLC27A4	0.958	1
RAG1	Del_11p11.2	0.958	1
SALL1	SLC27A4	0.958	1
SLC27A4	ZMYM3	0.958	1
SLC27A4	FAM47C	0.958	1
SLC27A4	Amp_14q21.1	0.958	1
SLC27A4	Amp_16q11.2	0.958	1
BMP2K	EDC4	0.958	1
BMP2K	ERN1	0.958	1
BMP2K	FAM111A	0.958	1
BMP2K	FAM120B	0.958	1
BMP2K	GAGE2D	0.958	1
BMP2K	MYOT	0.958	1
BMP2K	POM121	0.958	1
CNTNAP1	EDC4	0.958	1
CNTNAP1	ERN1	0.958	1
CNTNAP1	FAM111A	0.958	1
CNTNAP1	FAM120B	0.958	1
CNTNAP1	GAGE2D	0.958	1
CNTNAP1	MYOT	0.958	1
CNTNAP1	POM121	0.958	1
EDC4	MED15	0.958	1
EDC4	RPTN	0.958	1
EDC4	TNRC18	0.958	1
EDC4	3p-Amp	0.958	1
EDC4	10q-Del	0.958	1
EDC4	8q-Del	0.958	1
EDC4	Xp-Del	0.958	1
EDC4	Xq-Del	0.958	1
EDC4	Amp_13q12.11	0.958	1
EDC4	Amp_15q11.2	0.958	1
EDC4	Amp_20q13.2	0.958	1
EDC4	Del_5q11.2	0.958	1
ERN1	MED15	0.958	1
ERN1	RPTN	0.958	1
ERN1	TNRC18	0.958	1
ERN1	3p-Amp	0.958	1
ERN1	10q-Del	0.958	1
ERN1	8q-Del	0.958	1
ERN1	Xp-Del	0.958	1
ERN1	Xq-Del	0.958	1
ERN1	Amp_13q12.11	0.958	1
ERN1	Amp_15q11.2	0.958	1
ERN1	Amp_20q13.2	0.958	1
FAM111A	MED15	0.958	1
FAM111A	RPTN	0.958	1
FAM111A	TNRC18	0.958	1
FAM111A	3p-Amp	0.958	1
FAM111A	10q-Del	0.958	1
FAM111A	8q-Del	0.958	1
FAM111A	Xp-Del	0.958	1
FAM111A	Xq-Del	0.958	1
FAM111A	Amp_13q12.11	0.958	1
FAM111A	Amp_15q11.2	0.958	1
FAM111A	Amp_20q13.2	0.958	1
FAM111A	Del_5q11.2	0.958	1
FAM120B	MED15	0.958	1
FAM120B	RPTN	0.958	1
FAM120B	TNRC18	0.958	1
FAM120B	3p-Amp	0.958	1
FAM120B	10q-Del	0.958	1
FAM120B	8q-Del	0.958	1
FAM120B	Xp-Del	0.958	1
FAM120B	Xq-Del	0.958	1
FAM120B	Amp_13q12.11	0.958	1
FAM120B	Amp_15q11.2	0.958	1
FAM120B	Amp_20q13.2	0.958	1
GAGE2D	MED15	0.958	1
GAGE2D	RPTN	0.958	1
GAGE2D	TNRC18	0.958	1
GAGE2D	3p-Amp	0.958	1
GAGE2D	10q-Del	0.958	1
GAGE2D	8q-Del	0.958	1
GAGE2D	Xp-Del	0.958	1
GAGE2D	Xq-Del	0.958	1
GAGE2D	Amp_13q12.11	0.958	1
GAGE2D	Amp_15q11.2	0.958	1
GAGE2D	Amp_20q13.2	0.958	1
MED15	POM121	0.958	1
MYOT	TNRC18	0.958	1
MYOT	3p-Amp	0.958	1
MYOT	10q-Del	0.958	1
MYOT	Xp-Del	0.958	1
MYOT	Xq-Del	0.958	1
MYOT	Amp_13q12.11	0.958	1
MYOT	Amp_15q11.2	0.958	1
MYOT	Amp_20q13.2	0.958	1
POM121	RPTN	0.958	1
POM121	TNRC18	0.958	1
POM121	3p-Amp	0.958	1
POM121	10q-Del	0.958	1
POM121	8q-Del	0.958	1
POM121	Xp-Del	0.958	1
POM121	Xq-Del	0.958	1
POM121	Amp_13q12.11	0.958	1
POM121	Amp_15q11.2	0.958	1
POM121	Amp_20q13.2	0.958	1
3q-Amp	Del_6p25.1	0.958	1
8p-Amp	Amp_3q21.3	0.958	1
8p-Amp	Amp_Xp22.11	0.958	1
9q-Amp	12p-Del	0.958	1
9q-Amp	Del_9p23	0.958	1
9q-Amp	Del_19q13.2	0.958	1
12p-Del	Amp_12q23.1	0.958	1
13q-Del	Del_5q11.2	0.958	1
Amp_3q21.3	Del_19q13.2	0.958	1
Amp_8p11.23	Del_17p13.1	0.958	1
Amp_12q23.1	Del_15q21.3	0.958	1
Amp_Xp22.11	Del_19q13.2	0.958	1
Amp_Xq27.1	Del_19q13.2	0.958	1
Del_9p23	Del_11q22.3	0.958	1
Del_11p11.2	Del_18q21.31	0.958	1
Del_11q22.3	Del_15q21.3	0.958	1
ATM	8p-Del	0.959	1
EMG1	Del_16q24.1	0.959	1
FOXA1	OR4D5	0.959	1
FOXA1	BMP2K	0.959	1
FOXA1	CNTNAP1	0.959	1
FOXA1	MED15	0.959	1
FOXA1	RPTN	0.959	1
FOXA1	Xp-Del	0.959	1
FOXA1	Xq-Del	0.959	1
FOXA1	Amp_13q12.11	0.959	1
FOXA1	Amp_15q11.2	0.959	1
SLC27A4	Del_17p13.1	0.959	1
SMAD4	Del_16q24.1	0.959	1
MED15	17p-Del	0.959	1
MED15	Del_1q42.3	0.959	1
TCEB3	Del_16q24.1	0.959	1
3p-Amp	17p-Del	0.959	1
9q-Amp	8p-Del	0.959	1
17p-Del	Amp_20q13.2	0.959	1
8q-Del	Del_1q42.3	0.959	1
Amp_7p14.3	Del_8p23.2	0.959	1
Del_3p13	Del_18q23	0.959	1
Del_4q28.2	Del_8p21.3	0.959	1
COL11A1	Del_5q21.1	0.96	1
EMG1	16q-Del	0.96	1
FOXA1	Del_2q22.3	0.96	1
MUC17	Amp_7q22.1	0.96	1
PIK3CA	Del_18q21.31	0.96	1
PTEN	6q-Del	0.96	1
SMAD4	16q-Del	0.96	1
MED15	Del_13q14.13	0.96	1
RPTN	Del_13q14.13	0.96	1
TCEB3	16q-Del	0.96	1
7q-Amp	Del_8p23.2	0.96	1
10q-Del	Del_13q14.13	0.96	1
17p-Del	Del_1q42.3	0.96	1
18p-Del	Del_11p11.2	0.96	1
8q-Del	Del_13q14.13	0.96	1
Amp_13q12.11	Del_13q14.13	0.96	1
Amp_15q11.2	Del_13q14.13	0.96	1
Del_8p23.2	Del_11q23.2	0.96	1
ANO4	Del_1p22.1	0.961	1
PTEN	17p-Del	0.961	1
PTEN	Del_1q42.3	0.961	1
TP53	9q-Amp	0.961	1
SMG7	Del_21q22.2	0.961	1
TP53BP1	Del_1p22.1	0.961	1
7p-Amp	Del_1p31.3	0.961	1
7p-Amp	Del_11q23.2	0.961	1
9q-Amp	Del_17q21.31	0.961	1
8p-Del	Del_12q24.32	0.961	1
Amp_3q21.3	Del_8p23.2	0.961	1
Amp_Xp22.11	Del_17q21.31	0.961	1
Del_1p22.1	Del_13q22.1	0.961	1
Del_10q23.31	Del_16q24.1	0.961	1
BRAF	SLC27A4	0.962	1
EMG1	LCE2D	0.962	1
EMG1	NKX3-1	0.962	1
EMG1	RPL11	0.962	1
EMG1	SMAD4	0.962	1
EMG1	ESCO1	0.962	1
EMG1	MLLT10	0.962	1
EMG1	TCEB3	0.962	1
EMG1	Del_6q14.3	0.962	1
LCE2D	NKX3-1	0.962	1
LCE2D	RPL11	0.962	1
LCE2D	SMAD4	0.962	1
LCE2D	ESCO1	0.962	1
LCE2D	MLLT10	0.962	1
LCE2D	TCEB3	0.962	1
LCE2D	TCERG1	0.962	1
NKX3-1	RPL11	0.962	1
NKX3-1	SMAD4	0.962	1
NKX3-1	ESCO1	0.962	1
NKX3-1	MLLT10	0.962	1
NKX3-1	TCERG1	0.962	1
RPL11	SMAD4	0.962	1
RPL11	ESCO1	0.962	1
RPL11	MLLT10	0.962	1
RPL11	TCEB3	0.962	1
RPL11	TCERG1	0.962	1
SLC27A4	9q-Amp	0.962	1
SLC27A4	Amp_12q23.1	0.962	1
SLC27A4	Amp_Xp22.11	0.962	1
SLC27A4	Amp_Xq27.1	0.962	1
SMAD4	ESCO1	0.962	1
SMAD4	MLLT10	0.962	1
SMAD4	TCEB3	0.962	1
SMAD4	TCERG1	0.962	1
ESCO1	MLLT10	0.962	1
ESCO1	TCEB3	0.962	1
ESCO1	TCERG1	0.962	1
MLLT10	TCEB3	0.962	1
MLLT10	TCERG1	0.962	1
TCEB3	TCERG1	0.962	1
Amp_1q22	Del_18q23	0.962	1
Amp_11q13.2	Del_16q24.1	0.962	1
Del_1p31.3	Del_6q14.3	0.962	1
Del_1p31.3	Del_12q24.32	0.962	1
APC	Amp_9q33.3	0.963	1
LMOD2	Del_13q22.1	0.963	1
PIK3CA	Del_13q14.13	0.963	1
CR1L	Del_13q22.1	0.963	1
1q-Amp	Del_13q22.1	0.963	1
9q-Amp	Del_2q22.1	0.963	1
13q-Del	Del_10q23.31	0.963	1
Amp_17q23.2	Del_13q22.1	0.963	1
Del_1q42.3	Del_16q22.3	0.963	1
ANO4	ATM	0.964	1
ATM	L1CAM	0.964	1
ATM	SMG7	0.964	1
ATM	Amp_Xp21.1	0.964	1
COL11A1	Amp_11q13.2	0.964	1
FOXA1	SPOP	0.964	1
LCE2D	Del_2q22.3	0.964	1
MUC17	ZFHX3	0.964	1
MUC17	Amp_8q22.1	0.964	1
NKX3-1	Del_2q22.3	0.964	1
PIK3CA	Amp_11q13.2	0.964	1
LAMA3	Del_4q28.2	0.964	1
TCERG1	Del_2q22.3	0.964	1
TP53BP1	Amp_3q21.3	0.964	1
3q-Amp	Del_5q11.2	0.964	1
8q-Amp	18q-Del	0.964	1
12p-Del	Del_9p23	0.964	1
Amp_4q13.3	Del_11q22.3	0.964	1
Amp_7p14.3	Del_6p25.1	0.964	1
Amp_Xp21.1	Del_11q22.3	0.964	1
Del_11q23.2	Del_12p13.1	0.964	1
Del_15q21.3	Del_16q24.1	0.964	1
ATM	TP53	0.965	1
BHLHE22	HRAS	0.965	1
BHLHE22	IDH1	0.965	1
BHLHE22	LMOD2	0.965	1
BHLHE22	OR4P4	0.965	1
BHLHE22	CDKN1B	0.965	1
BHLHE22	CR1L	0.965	1
BHLHE22	EHHADH	0.965	1
BHLHE22	KIRREL	0.965	1
BHLHE22	ZNF709	0.965	1
BHLHE22	1q-Amp	0.965	1
BHLHE22	10p-Del	0.965	1
BHLHE22	22q-Del	0.965	1
BHLHE22	Amp_17q23.2	0.965	1
BHLHE22	Amp_Xq21.1	0.965	1
BHLHE22	Amp_Xq25	0.965	1
EMG1	Del_21q22.3	0.965	1
GRIA1	Del_6p25.1	0.965	1
HRAS	KIDINS220	0.965	1
HRAS	EDC4	0.965	1
HRAS	ERN1	0.965	1
HRAS	FAM111A	0.965	1
HRAS	FAM120B	0.965	1
HRAS	GAGE2D	0.965	1
HRAS	MYOT	0.965	1
HRAS	POM121	0.965	1
IDH1	KIDINS220	0.965	1
IDH1	EDC4	0.965	1
IDH1	ERN1	0.965	1
IDH1	FAM111A	0.965	1
IDH1	FAM120B	0.965	1
IDH1	GAGE2D	0.965	1
IDH1	MYOT	0.965	1
IDH1	POM121	0.965	1
KIDINS220	LMOD2	0.965	1
KIDINS220	OR4P4	0.965	1
KIDINS220	CDKN1B	0.965	1
KIDINS220	CR1L	0.965	1
KIDINS220	EHHADH	0.965	1
KIDINS220	KIRREL	0.965	1
KIDINS220	ZNF709	0.965	1
KIDINS220	1q-Amp	0.965	1
KIDINS220	10p-Del	0.965	1
KIDINS220	22q-Del	0.965	1
KIDINS220	Amp_17q23.2	0.965	1
KIDINS220	Amp_Xq21.1	0.965	1
KIDINS220	Amp_Xq25	0.965	1
LCE2D	Del_21q22.3	0.965	1
LMOD2	EDC4	0.965	1
LMOD2	ERN1	0.965	1
LMOD2	FAM111A	0.965	1
LMOD2	FAM120B	0.965	1
LMOD2	GAGE2D	0.965	1
LMOD2	MYOT	0.965	1
LMOD2	POM121	0.965	1
OR4P4	EDC4	0.965	1
OR4P4	ERN1	0.965	1
OR4P4	FAM111A	0.965	1
OR4P4	FAM120B	0.965	1
OR4P4	GAGE2D	0.965	1
OR4P4	MYOT	0.965	1
OR4P4	POM121	0.965	1
RPL11	Del_21q22.3	0.965	1
SMAD4	Del_21q22.3	0.965	1
CDKN1B	EDC4	0.965	1
CDKN1B	ERN1	0.965	1
CDKN1B	FAM111A	0.965	1
CDKN1B	FAM120B	0.965	1
CDKN1B	GAGE2D	0.965	1
CDKN1B	POM121	0.965	1
BMP2K	Del_11q23.2	0.965	1
CNTNAP1	Del_11q23.2	0.965	1
CR1L	EDC4	0.965	1
CR1L	ERN1	0.965	1
CR1L	FAM120B	0.965	1
CR1L	GAGE2D	0.965	1
CR1L	MYOT	0.965	1
CR1L	POM121	0.965	1
EDC4	EHHADH	0.965	1
EDC4	KIRREL	0.965	1
EDC4	ZNF709	0.965	1
EDC4	1q-Amp	0.965	1
EDC4	10p-Del	0.965	1
EDC4	22q-Del	0.965	1
EDC4	Amp_17q23.2	0.965	1
EDC4	Amp_Xq21.1	0.965	1
EDC4	Amp_Xq25	0.965	1
EHHADH	FAM111A	0.965	1
EHHADH	FAM120B	0.965	1
EHHADH	GAGE2D	0.965	1
EHHADH	MYOT	0.965	1
EHHADH	POM121	0.965	1
ERN1	ZNF709	0.965	1
ERN1	1q-Amp	0.965	1
ERN1	10p-Del	0.965	1
ERN1	22q-Del	0.965	1
ERN1	Amp_17q23.2	0.965	1
ERN1	Amp_Xq21.1	0.965	1
ERN1	Amp_Xq25	0.965	1
FAM111A	ZNF709	0.965	1
FAM111A	1q-Amp	0.965	1
FAM111A	10p-Del	0.965	1
FAM111A	22q-Del	0.965	1
FAM111A	Amp_17q23.2	0.965	1
FAM111A	Amp_Xq21.1	0.965	1
FAM111A	Amp_Xq25	0.965	1
FAM120B	KIRREL	0.965	1
FAM120B	ZNF709	0.965	1
FAM120B	1q-Amp	0.965	1
FAM120B	10p-Del	0.965	1
FAM120B	22q-Del	0.965	1
FAM120B	Amp_17q23.2	0.965	1
FAM120B	Amp_Xq21.1	0.965	1
FAM120B	Amp_Xq25	0.965	1
GAGE2D	KIRREL	0.965	1
GAGE2D	ZNF709	0.965	1
GAGE2D	1q-Amp	0.965	1
GAGE2D	10p-Del	0.965	1
GAGE2D	22q-Del	0.965	1
GAGE2D	Amp_17q23.2	0.965	1
GAGE2D	Amp_Xq21.1	0.965	1
GAGE2D	Amp_Xq25	0.965	1
KIRREL	MYOT	0.965	1
KIRREL	POM121	0.965	1
MLLT10	Del_21q22.3	0.965	1
MYOT	1q-Amp	0.965	1
MYOT	10p-Del	0.965	1
MYOT	22q-Del	0.965	1
MYOT	Amp_17q23.2	0.965	1
MYOT	Amp_Xq21.1	0.965	1
MYOT	Amp_Xq25	0.965	1
POM121	ZNF709	0.965	1
POM121	1q-Amp	0.965	1
POM121	10p-Del	0.965	1
POM121	22q-Del	0.965	1
POM121	Amp_17q23.2	0.965	1
POM121	Amp_Xq21.1	0.965	1
POM121	Amp_Xq25	0.965	1
TNRC18	13q-Del	0.965	1
ZFHX3	6q-Del	0.965	1
3p-Amp	13q-Del	0.965	1
7q-Amp	10q-Del	0.965	1
7q-Amp	8q-Del	0.965	1
8q-Amp	Del_13q14.13	0.965	1
12p-Del	Del_10q23.31	0.965	1
13q-Del	Amp_20q13.2	0.965	1
16q-Del	Del_11q23.2	0.965	1
8q-Del	Del_1p31.3	0.965	1
Amp_13q12.11	Del_1p31.3	0.965	1
Amp_15q11.2	Del_11q23.2	0.965	1
Del_1p22.1	Del_11p11.2	0.965	1
Del_9p23	Del_10q23.31	0.965	1
MUC17	7q-Amp	0.966	1
MUC17	Del_11q23.2	0.966	1
RAG1	Del_12p13.1	0.966	1
TP53	ZFHX3	0.966	1
TP53	Del_6p25.1	0.966	1
MLLT10	18q-Del	0.966	1
TCERG1	18q-Del	0.966	1
8q-Amp	Amp_12q23.1	0.966	1
6q-Del	Amp_8q24.21	0.966	1
Amp_3q26.2	Del_5q11.2	0.966	1
Amp_3q26.2	Del_16q24.1	0.966	1
Amp_8q22.1	Amp_15q11.2	0.966	1
Del_1q42.3	Del_17p13.1	0.966	1
ANO4	SLC27A4	0.967	1
ANO4	Del_17p13.1	0.967	1
BHLHE22	SPOP	0.967	1
GRIA1	Del_17p13.1	0.967	1
KDM6A	PTEN	0.967	1
MED12	SLC27A4	0.967	1
PTEN	ZMYM3	0.967	1
PTEN	Amp_14q21.1	0.967	1
SLC27A4	L1CAM	0.967	1
SLC27A4	LAMA3	0.967	1
SLC27A4	SMG7	0.967	1
SLC27A4	8p-Del	0.967	1
SLC27A4	Amp_4q13.3	0.967	1
SLC27A4	Amp_Xp21.1	0.967	1
SPOP	FAM120B	0.967	1
SPOP	MYOT	0.967	1
SPOP	POM121	0.967	1
EHHADH	7p-Amp	0.967	1
1q-Amp	7p-Amp	0.967	1
7p-Amp	Amp_17q23.2	0.967	1
12p-Del	Del_3p13	0.967	1
17p-Del	Del_5q13.2	0.967	1
18p-Del	Amp_9q33.3	0.967	1
18p-Del	Del_12q24.32	0.967	1
Amp_8q24.21	Del_2q22.3	0.967	1
Del_1q42.3	Del_5q13.2	0.967	1
Del_3p13	Del_15q21.3	0.967	1
Del_3p13	Del_19q13.2	0.967	1
Del_5q13.2	Del_19q13.2	0.967	1
ANO4	Del_19q13.2	0.968	1
FOXA1	ZFHX3	0.968	1
NTM	18p-Del	0.968	1
CNTNAP1	Amp_3q26.2	0.968	1
L1CAM	Del_19q13.2	0.968	1
LAMA3	Del_9p23	0.968	1
LAMA3	Del_15q21.3	0.968	1
MED15	18p-Del	0.968	1
RPTN	Amp_3q26.2	0.968	1
SMG7	8p-Amp	0.968	1
SMG7	12p-Del	0.968	1
SMG7	Del_9p23	0.968	1
TP53BP1	8p-Amp	0.968	1
TP53BP1	Del_9p23	0.968	1
TP53BP1	Del_15q21.3	0.968	1
ZFHX3	17p-Del	0.968	1
ZFHX3	Del_2q22.1	0.968	1
7p-Amp	8p-Del	0.968	1
16q-Del	Del_3p13	0.968	1
17p-Del	Del_6p25.1	0.968	1
18q-Del	Del_11p11.2	0.968	1
Xp-Del	Amp_8p11.23	0.968	1
Xq-Del	Amp_8p11.23	0.968	1
Amp_3q26.2	Amp_15q11.2	0.968	1
Amp_4q13.3	Del_9p23	0.968	1
Amp_8p11.23	Amp_15q11.2	0.968	1
Amp_9q33.3	Del_5q21.1	0.968	1
Amp_9q33.3	Del_18q21.31	0.968	1
Amp_Xp21.1	Del_19q13.2	0.968	1
Del_1q42.3	Del_6p25.1	0.968	1
Del_2q22.1	Del_6p25.1	0.968	1
Del_2q22.1	Del_11q22.3	0.968	1
Del_6p25.1	Del_8p23.2	0.968	1
Del_11q23.2	Del_13q14.13	0.968	1
Del_12q24.32	Del_18q21.31	0.968	1
APC	Del_2q22.3	0.969	1
BHLHE22	Del_5q13.2	0.969	1
KDM6A	Del_2q22.3	0.969	1
KDM6A	Del_6q14.3	0.969	1
LILRB5	Del_2q22.3	0.969	1
PTEN	13q-Del	0.969	1
FAM111A	Del_3p13	0.969	1
FAM111A	Del_5q13.2	0.969	1
8q-Amp	Del_13q22.1	0.969	1
Amp_14q21.1	Del_2q22.3	0.969	1
Amp_14q21.1	Del_6q14.3	0.969	1
Del_1p22.1	Del_17p13.1	0.969	1
COL11A1	PIK3CA	0.97	1
COL11A1	3q-Amp	0.97	1
CTNNB1	Amp_1q22	0.97	1
EPB41L3	Amp_11q13.2	0.97	1
LMOD2	Amp_7p14.3	0.97	1
MED12	Del_3p13	0.97	1
MUC17	EHHADH	0.97	1
MUC17	ZNF709	0.97	1
MUC17	22q-Del	0.97	1
MUC17	Amp_17q23.2	0.97	1
MUC17	Amp_Xq25	0.97	1
MUC17	Del_5q21.1	0.97	1
PIK3CA	Amp_1q22	0.97	1
EHHADH	Amp_7p14.3	0.97	1
TNRC18	Del_18q21.31	0.97	1
TP53BP1	Del_5q13.2	0.97	1
1q-Amp	Amp_7p14.3	0.97	1
3q-Amp	Amp_1q22	0.97	1
10q-Del	Del_18q21.31	0.97	1
17p-Del	Del_1p31.3	0.97	1
22q-Del	Amp_7p14.3	0.97	1
8p-Del	Del_19q13.2	0.97	1
Amp_7p14.3	Amp_17q23.2	0.97	1
Amp_20q13.2	Del_18q21.31	0.97	1
Del_1q42.3	Del_8p23.2	0.97	1
Del_6q14.3	Del_9p23	0.97	1
Del_11p11.2	Del_11q22.3	0.97	1
BRAF	Del_12q24.32	0.971	1
KIDINS220	TP53	0.971	1
TP53	EDC4	0.971	1
TP53	FAM111A	0.971	1
BMP2K	Del_21q22.2	0.971	1
FAM111A	Del_17q21.31	0.971	1
FAM120B	Del_17q21.31	0.971	1
TNRC18	Del_1p22.1	0.971	1
TNRC18	Del_18q23	0.971	1
10q-Del	Del_18q23	0.971	1
10q-Del	Del_21q22.2	0.971	1
16q-Del	Amp_3q26.2	0.971	1
18q-Del	Amp_14q21.1	0.971	1
18q-Del	Amp_16q11.2	0.971	1
8q-Del	Del_21q22.2	0.971	1
Xp-Del	Del_1p22.1	0.971	1
Xq-Del	Del_1p22.1	0.971	1
Amp_9q33.3	Amp_12q23.1	0.971	1
Amp_9q33.3	Amp_Xq27.1	0.971	1
Amp_9q33.3	Del_1p22.1	0.971	1
Amp_9q33.3	Del_21q22.2	0.971	1
Amp_11q13.2	Del_8p21.3	0.971	1
Amp_13q12.11	Del_21q22.2	0.971	1
Amp_20q13.2	Del_1p22.1	0.971	1
Amp_Xp22.11	Del_8p21.3	0.971	1
Amp_Xp22.11	Del_12q24.32	0.971	1
Del_2q22.3	Del_12q24.32	0.971	1
BHLHE22	EMG1	0.972	1
BHLHE22	LCE2D	0.972	1
BHLHE22	NKX3-1	0.972	1
BHLHE22	RPL11	0.972	1
BHLHE22	SMAD4	0.972	1
BHLHE22	ESCO1	0.972	1
BHLHE22	MLLT10	0.972	1
BHLHE22	TCEB3	0.972	1
BHLHE22	TCERG1	0.972	1
EMG1	KIDINS220	0.972	1
EMG1	ERN1	0.972	1
EMG1	FAM111A	0.972	1
EMG1	FAM120B	0.972	1
EMG1	GAGE2D	0.972	1
EMG1	MYOT	0.972	1
EMG1	POM121	0.972	1
FOXA1	IDH1	0.972	1
FOXA1	10p-Del	0.972	1
FOXA1	Amp_17q23.2	0.972	1
KIDINS220	LCE2D	0.972	1
KIDINS220	NKX3-1	0.972	1
KIDINS220	RPL11	0.972	1
KIDINS220	ESCO1	0.972	1
KIDINS220	MLLT10	0.972	1
KIDINS220	TCEB3	0.972	1
KIDINS220	TCERG1	0.972	1
LCE2D	EDC4	0.972	1
LCE2D	ERN1	0.972	1
LCE2D	FAM111A	0.972	1
LCE2D	FAM120B	0.972	1
LCE2D	GAGE2D	0.972	1
LCE2D	MYOT	0.972	1
LCE2D	POM121	0.972	1
NKX3-1	EDC4	0.972	1
NKX3-1	ERN1	0.972	1
NKX3-1	FAM111A	0.972	1
NKX3-1	FAM120B	0.972	1
NKX3-1	GAGE2D	0.972	1
NKX3-1	MYOT	0.972	1
NKX3-1	POM121	0.972	1
NTM	SLC27A4	0.972	1
OR4D5	SLC27A4	0.972	1
OR4P4	17p-Del	0.972	1
RAG1	ZFHX3	0.972	1
RAG1	Del_21q22.3	0.972	1
RPL11	EDC4	0.972	1
RPL11	ERN1	0.972	1
RPL11	FAM111A	0.972	1
RPL11	FAM120B	0.972	1
RPL11	GAGE2D	0.972	1
RPL11	MYOT	0.972	1
SALL1	Del_21q22.3	0.972	1
SLC27A4	BMP2K	0.972	1
SLC27A4	CNTNAP1	0.972	1
SLC27A4	MED15	0.972	1
SLC27A4	RPTN	0.972	1
SLC27A4	TNRC18	0.972	1
SLC27A4	3p-Amp	0.972	1
SLC27A4	10q-Del	0.972	1
SLC27A4	8q-Del	0.972	1
SLC27A4	Xp-Del	0.972	1
SLC27A4	Xq-Del	0.972	1
SLC27A4	Amp_13q12.11	0.972	1
SLC27A4	Amp_15q11.2	0.972	1
SLC27A4	Amp_20q13.2	0.972	1
SMAD4	ERN1	0.972	1
SMAD4	FAM111A	0.972	1
SMAD4	FAM120B	0.972	1
SMAD4	GAGE2D	0.972	1
SMAD4	MYOT	0.972	1
SMAD4	POM121	0.972	1
SMAD4	Del_16q22.3	0.972	1
TP53	Del_5q13.2	0.972	1
TP53	Del_15q21.3	0.972	1
TP53	Del_19q13.2	0.972	1
CDKN1B	Del_1q42.3	0.972	1
EDC4	ESCO1	0.972	1
EDC4	MLLT10	0.972	1
EDC4	TCEB3	0.972	1
EDC4	TCERG1	0.972	1
ERN1	ESCO1	0.972	1
ERN1	MLLT10	0.972	1
ERN1	TCEB3	0.972	1
ERN1	TCERG1	0.972	1
ESCO1	FAM111A	0.972	1
ESCO1	FAM120B	0.972	1
ESCO1	GAGE2D	0.972	1
ESCO1	MYOT	0.972	1
ESCO1	POM121	0.972	1
FAM111A	MLLT10	0.972	1
FAM111A	TCEB3	0.972	1
FAM111A	TCERG1	0.972	1
FAM120B	MLLT10	0.972	1
FAM120B	TCEB3	0.972	1
FAM120B	TCERG1	0.972	1
GAGE2D	MLLT10	0.972	1
GAGE2D	TCEB3	0.972	1
GAGE2D	TCERG1	0.972	1
KIRREL	17p-Del	0.972	1
MED15	Del_16q24.1	0.972	1
MLLT10	MYOT	0.972	1
MLLT10	POM121	0.972	1
MYOT	TCEB3	0.972	1
MYOT	TCERG1	0.972	1
POM121	TCEB3	0.972	1
POM121	TCERG1	0.972	1
ZFHX3	Amp_14q21.1	0.972	1
1q-Amp	Del_1q42.3	0.972	1
10p-Del	17p-Del	0.972	1
10p-Del	Del_1q42.3	0.972	1
17p-Del	22q-Del	0.972	1
17p-Del	Amp_Xq21.1	0.972	1
17p-Del	Amp_Xq25	0.972	1
18p-Del	Del_6q14.3	0.972	1
22q-Del	Del_1q42.3	0.972	1
6q-Del	Del_5q21.1	0.972	1
Xp-Del	Del_16q24.1	0.972	1
Xq-Del	Del_16q24.1	0.972	1
Amp_3q26.2	Del_6q14.3	0.972	1
Amp_7q22.1	Del_16q22.3	0.972	1
Amp_8p11.23	Del_6q14.3	0.972	1
Amp_15q11.2	Del_16q24.1	0.972	1
BHLHE22	Del_2q22.1	0.973	1
KIDINS220	Del_2q22.1	0.973	1
OR4P4	Del_12p13.1	0.973	1
SMAD4	Del_17p13.1	0.973	1
CNTNAP1	Del_5q11.2	0.973	1
CR1L	Del_12p13.1	0.973	1
EDC4	Del_2q22.1	0.973	1
EHHADH	Del_12p13.1	0.973	1
MYOT	Del_2q22.1	0.973	1
TCEB3	Del_17p13.1	0.973	1
1q-Amp	Del_12p13.1	0.973	1
3p-Amp	Del_5q11.2	0.973	1
Amp_20q13.2	Del_5q11.2	0.973	1
Del_5q11.2	Del_12q24.32	0.973	1
Del_5q11.2	Del_21q22.2	0.973	1
Del_12p13.1	Del_13q22.1	0.973	1
ANO4	Del_10q23.31	0.974	1
ATM	3p-Amp	0.974	1
ATM	10q-Del	0.974	1
ATM	8q-Del	0.974	1
ATM	Xp-Del	0.974	1
ATM	Xq-Del	0.974	1
ATM	Amp_20q13.2	0.974	1
FOXA1	Amp_8p11.23	0.974	1
OR4D5	Del_4q28.2	0.974	1
PTEN	Amp_Xp22.11	0.974	1
CNTNAP1	Del_11q22.3	0.974	1
EDC4	8q-Amp	0.974	1
EHHADH	Amp_7q22.1	0.974	1
FAM120B	8q-Amp	0.974	1
MED15	Amp_3q21.3	0.974	1
MED15	Del_4q28.2	0.974	1
RPTN	Amp_3q21.3	0.974	1
TNRC18	Amp_3q21.3	0.974	1
ZFHX3	Del_13q14.13	0.974	1
17p-Del	Amp_3q26.2	0.974	1
18q-Del	Amp_9q33.3	0.974	1
18q-Del	Del_12q24.32	0.974	1
Amp_1q22	Del_13q22.1	0.974	1
Amp_3q21.3	Amp_15q11.2	0.974	1
Amp_4q13.3	Del_11p11.2	0.974	1
Amp_7q22.1	Del_1p31.3	0.974	1
Amp_13q12.11	Del_4q28.2	0.974	1
Amp_15q11.2	Del_4q28.2	0.974	1
Del_2q22.3	Del_12p13.1	0.974	1
Del_9p23	Del_11p11.2	0.974	1
ATM	Amp_9q33.3	0.975	1
ATM	Del_5q21.1	0.975	1
ATM	Del_18q21.31	0.975	1
CTNNB1	7p-Amp	0.975	1
GRIA1	PIK3CA	0.975	1
MUC17	Del_1p22.1	0.975	1
OR4D5	Del_6q14.3	0.975	1
PIK3CA	6q-Del	0.975	1
TNRC18	Del_6q14.3	0.975	1
TNRC18	Del_8p21.3	0.975	1
3p-Amp	Del_6q14.3	0.975	1
3p-Amp	Del_8p21.3	0.975	1
7q-Amp	Del_6p25.1	0.975	1
10q-Del	Del_6q14.3	0.975	1
16q-Del	Del_17q21.31	0.975	1
18q-Del	Amp_8q22.1	0.975	1
6q-Del	Del_5q11.2	0.975	1
Amp_4q13.3	Del_2q22.1	0.975	1
Amp_9q33.3	Del_4q28.2	0.975	1
ANO4	8p-Del	0.976	1
APC	Amp_11q13.2	0.976	1
ATM	7p-Amp	0.976	1
GRIA1	Del_10q23.31	0.976	1
HRAS	SLC27A4	0.976	1
IDH1	SLC27A4	0.976	1
KDM6A	Amp_11q13.2	0.976	1
LMOD2	SLC27A4	0.976	1
LMOD2	Del_11q23.2	0.976	1
NTM	Del_9p23	0.976	1
NTM	Del_15q21.3	0.976	1
OR4D5	8p-Amp	0.976	1
OR4D5	Del_15q21.3	0.976	1
OR4P4	SLC27A4	0.976	1
SLC27A4	CDKN1B	0.976	1
SLC27A4	CR1L	0.976	1
SLC27A4	EHHADH	0.976	1
SLC27A4	KIRREL	0.976	1
SLC27A4	ZNF709	0.976	1
SLC27A4	1q-Amp	0.976	1
SLC27A4	10p-Del	0.976	1
SLC27A4	22q-Del	0.976	1
SLC27A4	Amp_17q23.2	0.976	1
SLC27A4	Amp_Xq21.1	0.976	1
SLC27A4	Amp_Xq25	0.976	1
CDKN1B	13q-Del	0.976	1
CDKN1B	Del_11q23.2	0.976	1
BMP2K	12p-Del	0.976	1
BMP2K	Del_19q13.2	0.976	1
CNTNAP1	8p-Amp	0.976	1
CNTNAP1	Del_9p23	0.976	1
CR1L	Del_1p31.3	0.976	1
CR1L	Del_11q23.2	0.976	1
EHHADH	7q-Amp	0.976	1
EHHADH	13q-Del	0.976	1
MED15	Del_19q13.2	0.976	1
TNRC18	8p-Amp	0.976	1
1q-Amp	7q-Amp	0.976	1
3p-Amp	8p-Amp	0.976	1
3p-Amp	Del_9p23	0.976	1
7p-Amp	Del_11q22.3	0.976	1
7q-Amp	Amp_17q23.2	0.976	1
8p-Amp	Amp_13q12.11	0.976	1
8p-Amp	Amp_15q11.2	0.976	1
10p-Del	Del_1p31.3	0.976	1
10p-Del	Del_11q23.2	0.976	1
10q-Del	Del_9p23	0.976	1
12p-Del	8q-Del	0.976	1
12p-Del	Xp-Del	0.976	1
12p-Del	Xq-Del	0.976	1
12p-Del	Amp_8q24.21	0.976	1
13q-Del	Amp_17q23.2	0.976	1
13q-Del	Amp_Xq21.1	0.976	1
18q-Del	Del_6q14.3	0.976	1
22q-Del	Del_1p31.3	0.976	1
22q-Del	Del_11q23.2	0.976	1
8p-Del	Amp_8p11.23	0.976	1
8q-Del	Del_15q21.3	0.976	1
8q-Del	Del_19q13.2	0.976	1
8q-Del	Del_21q22.3	0.976	1
Xp-Del	Del_15q21.3	0.976	1
Xq-Del	Del_15q21.3	0.976	1
Amp_8q24.21	Del_9p23	0.976	1
Amp_11q13.2	Del_2q22.1	0.976	1
Amp_20q13.2	Del_9p23	0.976	1
Amp_20q13.2	Del_15q21.3	0.976	1
Amp_20q13.2	Del_19q13.2	0.976	1
Amp_Xq25	Del_1p31.3	0.976	1
Del_1p22.1	Del_16q24.1	0.976	1
Del_16q24.1	Del_21q22.2	0.976	1
ANO4	Amp_9q33.3	0.977	1
APC	Amp_8q24.21	0.977	1
L1CAM	Amp_9q33.3	0.977	1
LAMA3	8q-Amp	0.977	1
SMG7	8q-Amp	0.977	1
TP53BP1	8q-Amp	0.977	1
7p-Amp	Del_16q22.3	0.977	1
8q-Amp	12p-Del	0.977	1
18p-Del	Del_2q22.3	0.977	1
Amp_7q22.1	Del_16q24.1	0.977	1
Amp_8p11.23	Del_2q22.3	0.977	1
Amp_Xp21.1	Del_12q24.32	0.977	1
Del_8p21.3	Del_21q22.2	0.977	1
Del_11p11.2	Del_12p13.1	0.977	1
ATM	Del_18q23	0.978	1
COL11A1	MUC17	0.978	1
COL11A1	Amp_7p14.3	0.978	1
CTNNB1	Del_3p13	0.978	1
HRAS	18p-Del	0.978	1
LCE2D	Del_10q23.31	0.978	1
MUC17	3q-Amp	0.978	1
PTEN	Del_18q23	0.978	1
TP53	Del_16q24.1	0.978	1
KIRREL	18p-Del	0.978	1
TCERG1	Del_10q23.31	0.978	1
1q-Amp	Amp_8p11.23	0.978	1
3q-Amp	Del_5q13.2	0.978	1
7q-Amp	Del_1p31.3	0.978	1
7q-Amp	Del_11q23.2	0.978	1
8p-Amp	Amp_9q33.3	0.978	1
8p-Amp	Del_12q24.32	0.978	1
9q-Amp	Del_6p25.1	0.978	1
12p-Del	Amp_8q22.1	0.978	1
12p-Del	Amp_9q33.3	0.978	1
12p-Del	Del_12q24.32	0.978	1
13q-Del	Del_1p31.3	0.978	1
13q-Del	Del_11q23.2	0.978	1
18p-Del	22q-Del	0.978	1
22q-Del	Amp_3q26.2	0.978	1
6q-Del	8p-Del	0.978	1
Amp_3q26.2	Del_6p25.1	0.978	1
Amp_8p11.23	Amp_17q23.2	0.978	1
Amp_8p11.23	Del_13q14.13	0.978	1
Amp_8q22.1	Del_19q13.2	0.978	1
Amp_9q33.3	Del_9p23	0.978	1
Amp_12q23.1	Del_2q22.3	0.978	1
Amp_Xq27.1	Del_6p25.1	0.978	1
APC	Amp_8q22.1	0.979	1
ATM	Amp_7p14.3	0.979	1
BHLHE22	KIDINS220	0.979	1
BHLHE22	EDC4	0.979	1
BHLHE22	ERN1	0.979	1
BHLHE22	FAM111A	0.979	1
BHLHE22	FAM120B	0.979	1
BHLHE22	GAGE2D	0.979	1
BHLHE22	MYOT	0.979	1
BHLHE22	POM121	0.979	1
EPB41L3	GRIA1	0.979	1
GRIA1	6q-Del	0.979	1
KIDINS220	ERN1	0.979	1
KIDINS220	FAM111A	0.979	1
KIDINS220	FAM120B	0.979	1
KIDINS220	GAGE2D	0.979	1
KIDINS220	MYOT	0.979	1
KIDINS220	POM121	0.979	1
NKX3-1	8p-Del	0.979	1
SMAD4	7p-Amp	0.979	1
TP53	Del_17q21.31	0.979	1
EDC4	ERN1	0.979	1
EDC4	FAM111A	0.979	1
EDC4	FAM120B	0.979	1
EDC4	GAGE2D	0.979	1
EDC4	MYOT	0.979	1
EDC4	POM121	0.979	1
EDC4	16q-Del	0.979	1
ERN1	FAM111A	0.979	1
ERN1	FAM120B	0.979	1
ERN1	GAGE2D	0.979	1
ERN1	MYOT	0.979	1
ERN1	POM121	0.979	1
FAM111A	FAM120B	0.979	1
FAM111A	GAGE2D	0.979	1
FAM111A	MYOT	0.979	1
FAM111A	POM121	0.979	1
FAM120B	GAGE2D	0.979	1
FAM120B	MYOT	0.979	1
FAM120B	POM121	0.979	1
GAGE2D	MYOT	0.979	1
GAGE2D	POM121	0.979	1
MYOT	POM121	0.979	1
TCEB3	8p-Del	0.979	1
7p-Amp	Del_16q24.1	0.979	1
8q-Amp	17p-Del	0.979	1
8q-Amp	Del_5q13.2	0.979	1
8q-Amp	Del_17p13.1	0.979	1
9q-Amp	Del_12p13.1	0.979	1
Amp_7p14.3	Del_11q22.3	0.979	1
Amp_8q22.1	Amp_14q21.1	0.979	1
Del_12p13.1	Del_21q22.2	0.979	1
Del_13q14.13	Del_19q13.2	0.979	1
Del_13q22.1	Del_19q13.2	0.979	1
ANO4	PTEN	0.98	1
APC	3q-Amp	0.98	1
COL11A1	FOXA1	0.98	1
COL11A1	LILRB5	0.98	1
CTNNB1	FOXA1	0.98	1
CTNNB1	KDM6A	0.98	1
CTNNB1	SALL1	0.98	1
FOXA1	Amp_1q22	0.98	1
MED12	PTEN	0.98	1
OR4P4	Del_1p22.1	0.98	1
PIK3CA	Amp_16q11.2	0.98	1
PTEN	L1CAM	0.98	1
PTEN	SMG7	0.98	1
PTEN	18q-Del	0.98	1
PTEN	Amp_4q13.3	0.98	1
PTEN	Amp_Xp21.1	0.98	1
ZMYM3	Amp_1q22	0.98	1
KIRREL	Del_21q22.2	0.98	1
ZNF709	Del_21q22.2	0.98	1
3q-Amp	17p-Del	0.98	1
3q-Amp	Amp_14q21.1	0.98	1
7p-Amp	Del_9p23	0.98	1
10p-Del	Del_1p22.1	0.98	1
13q-Del	Del_16q22.3	0.98	1
18q-Del	Del_21q22.3	0.98	1
22q-Del	Del_21q22.2	0.98	1
8p-Del	Del_5q13.2	0.98	1
Amp_17q23.2	Del_1p22.1	0.98	1
Amp_Xq25	Del_1p22.1	0.98	1
Del_1p31.3	Del_16q22.3	0.98	1
Del_1p22.1	Del_10q23.31	0.98	1
Del_6p25.1	Del_21q22.2	0.98	1
Del_10q23.31	Del_21q22.2	0.98	1
Del_12p13.1	Del_18q21.31	0.98	1
BHLHE22	Del_2q22.3	0.981	1
EMG1	SLC27A4	0.981	1
EPB41L3	7p-Amp	0.981	1
FOXA1	Del_8p21.3	0.981	1
LCE2D	MUC17	0.981	1
LCE2D	SLC27A4	0.981	1
MUC17	RPL11	0.981	1
NKX3-1	SLC27A4	0.981	1
RAG1	Del_18q21.31	0.981	1
RPL11	SLC27A4	0.981	1
SLC27A4	SMAD4	0.981	1
SLC27A4	ESCO1	0.981	1
SLC27A4	MLLT10	0.981	1
SLC27A4	TCERG1	0.981	1
SPOP	Amp_3q26.2	0.981	1
ZMYM3	Del_17p13.1	0.981	1
CR1L	Amp_8q22.1	0.981	1
CR1L	Amp_8q24.21	0.981	1
EDC4	Del_2q22.3	0.981	1
ERN1	Del_2q22.3	0.981	1
FAM120B	Del_8p23.2	0.981	1
KIRREL	Del_8p23.2	0.981	1
LAMA3	Del_13q22.1	0.981	1
1q-Amp	Amp_8q24.21	0.981	1
1q-Amp	Del_8p23.2	0.981	1
7p-Amp	6q-Del	0.981	1
7q-Amp	Amp_8p11.23	0.981	1
10q-Del	Del_11p11.2	0.981	1
13q-Del	Amp_3q26.2	0.981	1
16q-Del	Amp_3q21.3	0.981	1
22q-Del	Amp_8q22.1	0.981	1
22q-Del	Del_8p23.2	0.981	1
Amp_3q26.2	Del_11q23.2	0.981	1
Amp_8p11.23	Del_11q23.2	0.981	1
Amp_11q13.2	Amp_Xp22.11	0.981	1
Amp_13q12.11	Del_11p11.2	0.981	1
Amp_16q11.2	Del_17p13.1	0.981	1
Amp_20q13.2	Del_11p11.2	0.981	1
Del_1q42.3	Del_8p21.3	0.981	1
ATM	LMOD2	0.982	1
ATM	CDKN1B	0.982	1
ATM	EHHADH	0.982	1
ATM	10p-Del	0.982	1
ATM	22q-Del	0.982	1
ATM	Amp_Xq21.1	0.982	1
ATM	Del_1q42.3	0.982	1
CTNNB1	Amp_7q22.1	0.982	1
EMG1	17p-Del	0.982	1
FOXA1	RPL11	0.982	1
IDH1	Del_4q28.2	0.982	1
LMOD2	Del_11q22.3	0.982	1
NTM	Del_3p13	0.982	1
SLC27A4	Amp_8q22.1	0.982	1
SMAD4	17p-Del	0.982	1
CDKN1B	Del_4q28.2	0.982	1
CDKN1B	Del_11q22.3	0.982	1
CNTNAP1	Del_5q13.2	0.982	1
CR1L	Del_11q22.3	0.982	1
EDC4	18q-Del	0.982	1
FAM111A	18q-Del	0.982	1
MED15	Del_3p13	0.982	1
MED15	Del_16q22.3	0.982	1
MLLT10	17p-Del	0.982	1
TCEB3	17p-Del	0.982	1
TNRC18	Del_3p13	0.982	1
1q-Amp	Amp_3q21.3	0.982	1
1q-Amp	Del_4q28.2	0.982	1
3p-Amp	Del_5q13.2	0.982	1
10p-Del	Del_11q22.3	0.982	1
17p-Del	Amp_3q21.3	0.982	1
22q-Del	Amp_3q21.3	0.982	1
8q-Del	Del_16q22.3	0.982	1
Amp_8q22.1	Del_11q23.2	0.982	1
Amp_15q11.2	Del_16q22.3	0.982	1
Amp_16q11.2	Del_18q23	0.982	1
Amp_17q23.2	Del_11q22.3	0.982	1
Amp_20q13.2	Del_5q13.2	0.982	1
Del_1q42.3	Del_11q22.3	0.982	1
Del_2q22.1	Del_8p21.3	0.982	1
Del_8p23.2	Del_13q22.1	0.982	1
APC	EPB41L3	0.983	1
EPB41L3	RAG1	0.983	1
EPB41L3	Amp_7p14.3	0.983	1
EPB41L3	Amp_14q21.1	0.983	1
EPB41L3	Amp_16q11.2	0.983	1
KDM6A	6q-Del	0.983	1
MUC17	6q-Del	0.983	1
NKX3-1	Del_8p21.3	0.983	1
OR4P4	Del_18q21.31	0.983	1
TP53	13q-Del	0.983	1
TP53	Del_11p11.2	0.983	1
CDKN1B	Del_13q14.13	0.983	1
CR1L	Del_18q21.31	0.983	1
EDC4	Del_13q14.13	0.983	1
EHHADH	Del_13q14.13	0.983	1
L1CAM	Del_6p25.1	0.983	1
SMG7	ZFHX3	0.983	1
TP53BP1	ZFHX3	0.983	1
TP53BP1	Del_6p25.1	0.983	1
8p-Amp	Del_18q23	0.983	1
10p-Del	Del_13q14.13	0.983	1
16q-Del	Amp_4q13.3	0.983	1
16q-Del	Del_21q22.3	0.983	1
6q-Del	Amp_7p14.3	0.983	1
Amp_3q26.2	Del_5q13.2	0.983	1
Amp_7p14.3	Del_16q22.3	0.983	1
Del_2q22.1	Del_16q24.1	0.983	1
Del_12p13.1	Del_18q23	0.983	1
Del_12q24.32	Del_17p13.1	0.983	1
Del_15q21.3	Del_18q23	0.983	1
ATM	Del_16q24.1	0.984	1
COL11A1	9q-Amp	0.984	1
COL11A1	13q-Del	0.984	1
CTNNB1	7q-Amp	0.984	1
CTNNB1	Amp_Xp22.11	0.984	1
HRAS	Del_9p23	0.984	1
HRAS	Del_15q21.3	0.984	1
LILRB5	Del_5q11.2	0.984	1
MUC17	Del_17p13.1	0.984	1
NTM	Del_12q24.32	0.984	1
OR4P4	Del_18q23	0.984	1
PIK3CA	13q-Del	0.984	1
PIK3CA	Amp_Xp22.11	0.984	1
SMAD4	Amp_7q22.1	0.984	1
SPOP	Del_12q24.32	0.984	1
TP53	10q-Del	0.984	1
TP53	8q-Del	0.984	1
CDKN1B	12p-Del	0.984	1
CDKN1B	Del_15q21.3	0.984	1
CNTNAP1	Amp_9q33.3	0.984	1
CR1L	8p-Amp	0.984	1
CR1L	12p-Del	0.984	1
CR1L	Del_9p23	0.984	1
CR1L	Del_15q21.3	0.984	1
CR1L	Del_18q23	0.984	1
EHHADH	12p-Del	0.984	1
EHHADH	Del_15q21.3	0.984	1
KIRREL	12p-Del	0.984	1
KIRREL	Del_9p23	0.984	1
SMG7	Del_8p23.2	0.984	1
1q-Amp	8p-Amp	0.984	1
1q-Amp	Del_9p23	0.984	1
3p-Amp	Amp_9q33.3	0.984	1
3q-Amp	Amp_Xp22.11	0.984	1
3q-Amp	Amp_Xq27.1	0.984	1
10p-Del	12p-Del	0.984	1
10q-Del	Del_12q24.32	0.984	1
12p-Del	22q-Del	0.984	1
12p-Del	Amp_Xq25	0.984	1
13q-Del	Amp_1q22	0.984	1
18q-Del	Del_2q22.3	0.984	1
22q-Del	Del_15q21.3	0.984	1
8q-Del	Del_17q21.31	0.984	1
Amp_1q22	Del_11q23.2	0.984	1
Amp_9q33.3	Amp_15q11.2	0.984	1
Amp_9q33.3	Del_11p11.2	0.984	1
Amp_17q23.2	Del_9p23	0.984	1
Amp_17q23.2	Del_19q13.2	0.984	1
Amp_20q13.2	Del_12q24.32	0.984	1
Amp_Xq21.1	Del_9p23	0.984	1
Amp_Xq25	Del_19q13.2	0.984	1
Del_5q13.2	Del_18q23	0.984	1
Del_11p11.2	Del_12q24.32	0.984	1
Del_12p13.1	Del_12q24.32	0.984	1
ATM	Amp_7q22.1	0.985	1
ATM	Del_12p13.1	0.985	1
EMG1	Del_1p31.3	0.985	1
FOXA1	6q-Del	0.985	1
LCE2D	13q-Del	0.985	1
LCE2D	Del_1p31.3	0.985	1
NKX3-1	Del_1p31.3	0.985	1
RPL11	Del_1p31.3	0.985	1
SMAD4	7q-Amp	0.985	1
SMAD4	13q-Del	0.985	1
SMAD4	Del_11q23.2	0.985	1
SPOP	Del_1p22.1	0.985	1
CR1L	Del_5q11.2	0.985	1
KIRREL	Del_5q11.2	0.985	1
L1CAM	Del_2q22.3	0.985	1
LAMA3	Amp_11q13.2	0.985	1
MLLT10	Del_11q23.2	0.985	1
SMG7	Amp_11q13.2	0.985	1
TCERG1	Del_11q23.2	0.985	1
TP53BP1	Amp_11q13.2	0.985	1
8p-Amp	17p-Del	0.985	1
8p-Amp	Del_17p13.1	0.985	1
12p-Del	Del_1q42.3	0.985	1
12p-Del	Del_5q11.2	0.985	1
17p-Del	Del_9p23	0.985	1
Amp_7p14.3	Del_16q24.1	0.985	1
Amp_9q33.3	Del_5q13.2	0.985	1
Amp_20q13.2	Del_2q22.1	0.985	1
Amp_Xq25	Del_5q11.2	0.985	1
Del_1p31.3	Del_2q22.1	0.985	1
Del_1q42.3	Del_15q21.3	0.985	1
Del_1q42.3	Del_19q13.2	0.985	1
Del_6p25.1	Del_8p21.3	0.985	1
Del_11q22.3	Del_12p13.1	0.985	1
Del_13q22.1	Del_17p13.1	0.985	1
Del_15q21.3	Del_17p13.1	0.985	1
Del_16q22.3	Del_17q21.31	0.985	1
APC	RAG1	0.986	1
BHLHE22	SLC27A4	0.986	1
COL11A1	Del_8p21.3	0.986	1
KIDINS220	SLC27A4	0.986	1
LILRB5	FAM47C	0.986	1
LILRB5	7p-Amp	0.986	1
PIK3CA	Amp_8p11.23	0.986	1
PIK3CA	Del_8p21.3	0.986	1
PTEN	TNRC18	0.986	1
PTEN	10q-Del	0.986	1
RAG1	7p-Amp	0.986	1
SLC27A4	EDC4	0.986	1
SLC27A4	ERN1	0.986	1
SLC27A4	FAM111A	0.986	1
SLC27A4	FAM120B	0.986	1
SLC27A4	GAGE2D	0.986	1
SLC27A4	MYOT	0.986	1
SLC27A4	POM121	0.986	1
ZMYM3	Amp_16q11.2	0.986	1
LAMA3	Del_13q14.13	0.986	1
ZFHX3	Del_9p23	0.986	1
3p-Amp	8q-Amp	0.986	1
8q-Amp	Amp_13q12.11	0.986	1
8q-Amp	Amp_20q13.2	0.986	1
13q-Del	Del_5q21.1	0.986	1
13q-Del	Del_18q21.31	0.986	1
16q-Del	Del_12p13.1	0.986	1
Amp_3q26.2	Del_16q22.3	0.986	1
Amp_4q13.3	Del_13q14.13	0.986	1
Amp_14q21.1	Amp_16q11.2	0.986	1
Del_1p31.3	Del_18q21.31	0.986	1
Del_6p25.1	Del_15q21.3	0.986	1
ATM	7q-Amp	0.987	1
ATM	18q-Del	0.987	1
ATM	Amp_11q13.2	0.987	1
ATM	Del_8p21.3	0.987	1
EPB41L3	9q-Amp	0.987	1
EPB41L3	Amp_Xp22.11	0.987	1
NKX3-1	Amp_8p11.23	0.987	1
SMAD4	Amp_8p11.23	0.987	1
MLLT10	18p-Del	0.987	1
TCERG1	18p-Del	0.987	1
TNRC18	Del_10q23.31	0.987	1
9q-Amp	6q-Del	0.987	1
10p-Del	Del_11p11.2	0.987	1
13q-Del	Amp_3q21.3	0.987	1
18p-Del	Del_8p21.3	0.987	1
18p-Del	Del_21q22.2	0.987	1
6q-Del	Amp_Xq27.1	0.987	1
8p-Del	Amp_16q11.2	0.987	1
Amp_8q22.1	Amp_12q23.1	0.987	1
Amp_8q22.1	Del_18q23	0.987	1
Amp_11q13.2	Del_4q28.2	0.987	1
Amp_11q13.2	Del_11q22.3	0.987	1
Del_3p13	Del_21q22.2	0.987	1
Del_4q28.2	Del_11q23.2	0.987	1
APC	MUC17	0.988	1
APC	Amp_7p14.3	0.988	1
ATM	Del_8p23.2	0.988	1
COL11A1	L1CAM	0.988	1
COL11A1	TP53BP1	0.988	1
COL11A1	Del_21q22.2	0.988	1
CTNNB1	Amp_4q13.3	0.988	1
CTNNB1	Amp_Xp21.1	0.988	1
EMG1	Del_1p22.1	0.988	1
EMG1	Del_21q22.2	0.988	1
EPB41L3	7q-Amp	0.988	1
GRIA1	Del_1p31.3	0.988	1
LCE2D	Del_21q22.2	0.988	1
MED12	Amp_1q22	0.988	1
MED12	Del_12p13.1	0.988	1
MUC17	Amp_14q21.1	0.988	1
PIK3CA	Amp_4q13.3	0.988	1
PIK3CA	Amp_Xp21.1	0.988	1
RAG1	Amp_7p14.3	0.988	1
RPL11	Del_12p13.1	0.988	1
ESCO1	Del_21q22.2	0.988	1
MED15	ZFHX3	0.988	1
MED15	Del_6p25.1	0.988	1
MLLT10	Del_21q22.2	0.988	1
MYOT	Del_16q24.1	0.988	1
RPTN	Del_6p25.1	0.988	1
TCEB3	Del_12p13.1	0.988	1
TCEB3	Del_21q22.2	0.988	1
TCERG1	Del_12p13.1	0.988	1
TCERG1	Del_21q22.2	0.988	1
TP53BP1	Amp_1q22	0.988	1
ZFHX3	3p-Amp	0.988	1
ZFHX3	10q-Del	0.988	1
ZFHX3	8q-Del	0.988	1
ZFHX3	Amp_15q11.2	0.988	1
1q-Amp	Del_16q24.1	0.988	1
3p-Amp	Del_6p25.1	0.988	1
3q-Amp	Amp_Xp21.1	0.988	1
7q-Amp	6q-Del	0.988	1
9q-Amp	Del_5q21.1	0.988	1
10p-Del	Del_16q24.1	0.988	1
10q-Del	8p-Del	0.988	1
16q-Del	Del_5q21.1	0.988	1
17p-Del	Del_13q22.1	0.988	1
18p-Del	Del_2q22.1	0.988	1
6q-Del	Del_2q22.1	0.988	1
6q-Del	Del_11q23.2	0.988	1
8q-Del	Del_6p25.1	0.988	1
Amp_1q22	Del_16q22.3	0.988	1
Amp_3q26.2	Del_2q22.1	0.988	1
Amp_7p14.3	Amp_14q21.1	0.988	1
Amp_12q23.1	Del_5q21.1	0.988	1
Amp_13q12.11	Del_6p25.1	0.988	1
Amp_20q13.2	Del_6p25.1	0.988	1
Del_3p13	Del_8p23.2	0.988	1
Del_5q11.2	Del_11q23.2	0.988	1
APC	SPOP	0.989	1
APC	9q-Amp	0.989	1
APC	Amp_12q23.1	0.989	1
APC	Amp_Xq27.1	0.989	1
ATM	SMAD4	0.989	1
ATM	Amp_3q26.2	0.989	1
BHLHE22	7p-Amp	0.989	1
BRAF	RAG1	0.989	1
BRAF	ZMYM3	0.989	1
KDM6A	Amp_Xq27.1	0.989	1
OR4P4	Del_12q24.32	0.989	1
PIK3CA	16q-Del	0.989	1
PTEN	Del_13q14.13	0.989	1
RAG1	17p-Del	0.989	1
RAG1	Amp_Xp22.11	0.989	1
RPL11	Del_4q28.2	0.989	1
SMAD4	Del_11q22.3	0.989	1
TP53	Del_21q22.2	0.989	1
EHHADH	Amp_9q33.3	0.989	1
FAM111A	Del_6q14.3	0.989	1
FAM111A	Del_21q22.3	0.989	1
FAM47C	Amp_Xq27.1	0.989	1
MLLT10	Del_11q22.3	0.989	1
1q-Amp	Del_12q24.32	0.989	1
3p-Amp	Amp_11q13.2	0.989	1
7q-Amp	Del_9p23	0.989	1
8p-Amp	Del_11q23.2	0.989	1
8q-Amp	6q-Del	0.989	1
9q-Amp	Amp_16q11.2	0.989	1
13q-Del	Del_19q13.2	0.989	1
17p-Del	Amp_14q21.1	0.989	1
Xp-Del	Amp_11q13.2	0.989	1
Xq-Del	Amp_11q13.2	0.989	1
Amp_3q26.2	Del_4q28.2	0.989	1
Amp_3q26.2	Del_5q21.1	0.989	1
Amp_8p11.23	Del_5q21.1	0.989	1
Amp_8p11.23	Del_11q22.3	0.989	1
Amp_9q33.3	Amp_Xq25	0.989	1
Amp_11q13.2	Amp_15q11.2	0.989	1
Amp_11q13.2	Del_9p23	0.989	1
Amp_12q23.1	Amp_16q11.2	0.989	1
Amp_14q21.1	Amp_Xp22.11	0.989	1
Amp_Xp22.11	Del_16q22.3	0.989	1
Amp_Xp22.11	Del_18q23	0.989	1
Amp_Xq25	Del_12q24.32	0.989	1
Del_1p31.3	Del_15q21.3	0.989	1
Del_5q13.2	Del_13q22.1	0.989	1
Del_9p23	Del_11q23.2	0.989	1
Del_13q14.13	Del_17q21.31	0.989	1
Del_13q22.1	Del_18q21.31	0.989	1
Del_17q21.31	Del_21q22.2	0.989	1
ANO4	6q-Del	0.99	1
APC	Amp_7q22.1	0.99	1
ATM	3q-Amp	0.99	1
COL11A1	Del_4q28.2	0.99	1
CTNNB1	Del_4q28.2	0.99	1
EMG1	8p-Amp	0.99	1
EMG1	Del_19q13.2	0.99	1
EPB41L3	LAMA3	0.99	1
EPB41L3	SMG7	0.99	1
EPB41L3	Amp_Xp21.1	0.99	1
HRAS	Del_5q13.2	0.99	1
IDH1	PTEN	0.99	1
LCE2D	Del_15q21.3	0.99	1
LCE2D	Del_19q13.2	0.99	1
LILRB5	Amp_7q22.1	0.99	1
LMOD2	PTEN	0.99	1
MUC17	MYOT	0.99	1
MUC17	POM121	0.99	1
NKX3-1	Del_9p23	0.99	1
NTM	16q-Del	0.99	1
OR4P4	Del_6q14.3	0.99	1
PIK3CA	Del_8p23.2	0.99	1
PTEN	CR1L	0.99	1
RAG1	Amp_7q22.1	0.99	1
RPL11	Del_15q21.3	0.99	1
SLC27A4	Del_17q21.31	0.99	1
SMAD4	8p-Amp	0.99	1
SMAD4	12p-Del	0.99	1
SMAD4	Del_9p23	0.99	1
SMAD4	Del_15q21.3	0.99	1
ZMYM3	Del_3p13	0.99	1
CR1L	Del_5q13.2	0.99	1
CR1L	Del_6q14.3	0.99	1
KIRREL	Del_5q13.2	0.99	1
L1CAM	6q-Del	0.99	1
LAMA3	6q-Del	0.99	1
1q-Amp	Del_5q13.2	0.99	1
1q-Amp	Del_6q14.3	0.99	1
3p-Amp	16q-Del	0.99	1
7p-Amp	9q-Amp	0.99	1
8p-Amp	18q-Del	0.99	1
18p-Del	6q-Del	0.99	1
18q-Del	Del_19q13.2	0.99	1
22q-Del	Del_3p13	0.99	1
6q-Del	Amp_3q26.2	0.99	1
6q-Del	Amp_8p11.23	0.99	1
8p-Del	Amp_9q33.3	0.99	1
Amp_1q22	Del_11q22.3	0.99	1
Amp_8q22.1	Del_2q22.3	0.99	1
Amp_12q23.1	Del_5q11.2	0.99	1
Amp_Xq25	Del_5q13.2	0.99	1
Del_1p22.1	Del_16q22.3	0.99	1
Del_10q23.31	Del_19q13.2	0.99	1
APC	Del_13q22.1	0.991	1
COL11A1	OR4D5	0.991	1
COL11A1	TNRC18	0.991	1
COL11A1	Xp-Del	0.991	1
COL11A1	Xq-Del	0.991	1
COL11A1	Amp_15q11.2	0.991	1
CTNNB1	RPTN	0.991	1
CTNNB1	8p-Amp	0.991	1
GRIA1	Del_1p22.1	0.991	1
KDM6A	13q-Del	0.991	1
KDM6A	Del_11q23.2	0.991	1
KIDINS220	17p-Del	0.991	1
LILRB5	7q-Amp	0.991	1
NTM	Amp_1q22	0.991	1
OR4D5	Amp_1q22	0.991	1
PIK3CA	RPTN	0.991	1
PIK3CA	TNRC18	0.991	1
PIK3CA	Amp_8q24.21	0.991	1
PIK3CA	Amp_20q13.2	0.991	1
PIK3CA	Del_15q21.3	0.991	1
RAG1	7q-Amp	0.991	1
SMAD4	Amp_8q24.21	0.991	1
TP53	Amp_Xq21.1	0.991	1
CR1L	Del_21q22.3	0.991	1
EHHADH	Del_17q21.31	0.991	1
ERN1	Del_1q42.3	0.991	1
FAM111A	17p-Del	0.991	1
MED15	3q-Amp	0.991	1
MYOT	Del_1q42.3	0.991	1
RPTN	3q-Amp	0.991	1
RPTN	Del_13q22.1	0.991	1
1q-Amp	Del_21q22.3	0.991	1
3p-Amp	Amp_1q22	0.991	1
3q-Amp	Amp_8q24.21	0.991	1
8p-Amp	18p-Del	0.991	1
8p-Amp	Amp_1q22	0.991	1
9q-Amp	Amp_7p14.3	0.991	1
10q-Del	Del_13q22.1	0.991	1
12p-Del	18p-Del	0.991	1
18p-Del	Del_5q11.2	0.991	1
18p-Del	Del_15q21.3	0.991	1
18p-Del	Del_19q13.2	0.991	1
6q-Del	Del_1p22.1	0.991	1
8p-Del	Del_6q14.3	0.991	1
Xp-Del	Del_2q22.3	0.991	1
Xq-Del	Del_2q22.3	0.991	1
Amp_1q22	Amp_8q22.1	0.991	1
Amp_1q22	Amp_15q11.2	0.991	1
Amp_1q22	Amp_20q13.2	0.991	1
Amp_1q22	Del_9p23	0.991	1
Amp_3q26.2	Del_8p23.2	0.991	1
Amp_4q13.3	Del_16q24.1	0.991	1
Amp_8p11.23	Del_5q11.2	0.991	1
Amp_13q12.11	Del_13q22.1	0.991	1
Amp_20q13.2	Del_13q22.1	0.991	1
Amp_Xp21.1	Del_16q24.1	0.991	1
Amp_Xq21.1	Del_17q21.31	0.991	1
Del_1p22.1	Del_4q28.2	0.991	1
Del_1p22.1	Del_11q22.3	0.991	1
Del_11q22.3	Del_13q14.13	0.991	1
Del_13q22.1	Del_18q23	0.991	1
ANO4	APC	0.992	1
ANO4	KDM6A	0.992	1
APC	L1CAM	0.992	1
APC	Amp_4q13.3	0.992	1
APC	Del_2q22.1	0.992	1
ATM	6q-Del	0.992	1
ATM	Amp_3q21.3	0.992	1
BHLHE22	13q-Del	0.992	1
BRAF	Amp_Xp22.11	0.992	1
COL11A1	Del_13q14.13	0.992	1
CTNNB1	Del_13q14.13	0.992	1
FOXA1	Amp_12q23.1	0.992	1
LILRB5	L1CAM	0.992	1
MED12	ZMYM3	0.992	1
MED12	FAM47C	0.992	1
RAG1	SMG7	0.992	1
SALL1	TP53	0.992	1
SALL1	Del_17q21.31	0.992	1
SMAD4	Amp_8q22.1	0.992	1
SMAD4	Del_11p11.2	0.992	1
TP53	16q-Del	0.992	1
ZMYM3	L1CAM	0.992	1
ZMYM3	SMG7	0.992	1
ZMYM3	TP53BP1	0.992	1
CDKN1B	Del_6p25.1	0.992	1
CR1L	8q-Amp	0.992	1
CR1L	Del_6p25.1	0.992	1
EDC4	Del_1p31.3	0.992	1
EDC4	Del_17p13.1	0.992	1
FAM111A	Del_17p13.1	0.992	1
FAM47C	SMG7	0.992	1
L1CAM	Del_6q14.3	0.992	1
LAMA3	Del_6q14.3	0.992	1
ZFHX3	Amp_17q23.2	0.992	1
ZFHX3	Amp_Xq21.1	0.992	1
8q-Amp	Amp_17q23.2	0.992	1
9q-Amp	17p-Del	0.992	1
9q-Amp	Amp_Xp22.11	0.992	1
9q-Amp	Amp_Xq27.1	0.992	1
10p-Del	Del_6p25.1	0.992	1
10q-Del	18q-Del	0.992	1
13q-Del	16q-Del	0.992	1
17p-Del	Amp_Xp22.11	0.992	1
22q-Del	Del_6p25.1	0.992	1
6q-Del	Del_4q28.2	0.992	1
8p-Del	Del_9p23	0.992	1
8p-Del	Del_15q21.3	0.992	1
Amp_4q13.3	Amp_14q21.1	0.992	1
Amp_4q13.3	Amp_16q11.2	0.992	1
Amp_8q22.1	Del_12q24.32	0.992	1
Amp_8q24.21	Del_4q28.2	0.992	1
Amp_11q13.2	Del_13q22.1	0.992	1
Amp_17q23.2	Del_6p25.1	0.992	1
Amp_Xq25	Del_6p25.1	0.992	1
Del_2q22.3	Del_18q21.31	0.992	1
Del_4q28.2	Del_11q22.3	0.992	1
Del_5q11.2	Del_16q22.3	0.992	1
Del_5q21.1	Del_12p13.1	0.992	1
APC	Amp_3q26.2	0.993	1
ATM	Amp_8q22.1	0.993	1
EMG1	Del_5q11.2	0.993	1
EMG1	Del_18q21.31	0.993	1
EMG1	Del_18q23	0.993	1
EPB41L3	BMP2K	0.993	1
FOXA1	Del_12q24.32	0.993	1
GRIA1	10q-Del	0.993	1
LCE2D	Del_5q21.1	0.993	1
PIK3CA	Del_18q23	0.993	1
SMAD4	Del_5q11.2	0.993	1
SMAD4	Del_5q21.1	0.993	1
EDC4	18p-Del	0.993	1
FAM111A	18p-Del	0.993	1
FAM120B	Amp_8p11.23	0.993	1
GAGE2D	Amp_3q26.2	0.993	1
MED15	6q-Del	0.993	1
RPTN	6q-Del	0.993	1
TNRC18	6q-Del	0.993	1
1q-Amp	Del_16q22.3	0.993	1
7p-Amp	Del_8p23.2	0.993	1
8p-Amp	6q-Del	0.993	1
8p-Amp	Del_8p21.3	0.993	1
8q-Amp	Amp_14q21.1	0.993	1
9q-Amp	Amp_7q22.1	0.993	1
10p-Del	Del_16q22.3	0.993	1
12p-Del	Del_21q22.2	0.993	1
13q-Del	Del_11p11.2	0.993	1
16q-Del	6q-Del	0.993	1
17p-Del	Amp_9q33.3	0.993	1
17p-Del	Del_12q24.32	0.993	1
18p-Del	Amp_14q21.1	0.993	1
18p-Del	Del_21q22.3	0.993	1
22q-Del	Amp_11q13.2	0.993	1
22q-Del	Del_16q22.3	0.993	1
6q-Del	Amp_13q12.11	0.993	1
6q-Del	Del_19q13.2	0.993	1
Amp_7p14.3	Del_5q11.2	0.993	1
Amp_7p14.3	Del_11q23.2	0.993	1
Amp_7q22.1	Amp_Xp22.11	0.993	1
Amp_8p11.23	Amp_14q21.1	0.993	1
Amp_8p11.23	Amp_16q11.2	0.993	1
Amp_17q23.2	Del_17p13.1	0.993	1
Del_1q42.3	Del_13q14.13	0.993	1
Del_2q22.3	Del_18q23	0.993	1
Del_4q28.2	Del_16q22.3	0.993	1
Del_6q14.3	Del_18q21.31	0.993	1
Del_8p21.3	Del_11p11.2	0.993	1
Del_19q13.2	Del_21q22.2	0.993	1
ANO4	9q-Amp	0.994	1
APC	3p-Amp	0.994	1
ATM	KIDINS220	0.994	1
ATM	12p-Del	0.994	1
BHLHE22	Del_11q22.3	0.994	1
BRAF	SPOP	0.994	1
BRAF	L1CAM	0.994	1
BRAF	TP53BP1	0.994	1
COL11A1	LMOD2	0.994	1
COL11A1	OR4P4	0.994	1
COL11A1	CDKN1B	0.994	1
CTNNB1	IDH1	0.994	1
CTNNB1	LMOD2	0.994	1
CTNNB1	CDKN1B	0.994	1
CTNNB1	EHHADH	0.994	1
CTNNB1	KIRREL	0.994	1
KDM6A	Xp-Del	0.994	1
KDM6A	Xq-Del	0.994	1
LCE2D	PTEN	0.994	1
LILRB5	Xp-Del	0.994	1
LILRB5	Xq-Del	0.994	1
LILRB5	Amp_15q11.2	0.994	1
LILRB5	Del_4q28.2	0.994	1
LMOD2	Amp_1q22	0.994	1
NTM	ZMYM3	0.994	1
OR4D5	ZMYM3	0.994	1
PIK3CA	ZNF709	0.994	1
PIK3CA	Amp_Xq25	0.994	1
RAG1	TNRC18	0.994	1
TP53	12p-Del	0.994	1
TP53	Del_9p23	0.994	1
ZMYM3	MED15	0.994	1
ZMYM3	RPTN	0.994	1
ZMYM3	Amp_15q11.2	0.994	1
ZMYM3	Del_16q24.1	0.994	1
EDC4	Del_1p22.1	0.994	1
ERN1	Del_10q23.31	0.994	1
FAM111A	8p-Del	0.994	1
FAM111A	Del_1p22.1	0.994	1
FAM111A	Del_21q22.2	0.994	1
FAM47C	RPTN	0.994	1
L1CAM	9q-Amp	0.994	1
L1CAM	Amp_Xq27.1	0.994	1
L1CAM	Del_5q11.2	0.994	1
L1CAM	Del_5q21.1	0.994	1
LAMA3	Amp_12q23.1	0.994	1
MYOT	Del_1p22.1	0.994	1
RPTN	Amp_16q11.2	0.994	1
SMG7	Amp_Xp22.11	0.994	1
1q-Amp	Del_8p21.3	0.994	1
3q-Amp	Amp_17q23.2	0.994	1
7p-Amp	Amp_Xp21.1	0.994	1
7p-Amp	Del_6p25.1	0.994	1
7q-Amp	9q-Amp	0.994	1
8p-Amp	Del_11q22.3	0.994	1
9q-Amp	Del_5q13.2	0.994	1
9q-Amp	Del_8p23.2	0.994	1
16q-Del	Del_2q22.1	0.994	1
22q-Del	Amp_1q22	0.994	1
6q-Del	Del_8p21.3	0.994	1
6q-Del	Del_17p13.1	0.994	1
8p-Del	Del_5q11.2	0.994	1
Xp-Del	Del_12p13.1	0.994	1
Xq-Del	Del_12p13.1	0.994	1
Amp_1q22	Del_5q11.2	0.994	1
Amp_3q26.2	Del_11p11.2	0.994	1
Amp_4q13.3	Amp_12q23.1	0.994	1
Amp_4q13.3	Del_18q21.31	0.994	1
Amp_4q13.3	Del_18q23	0.994	1
Amp_8p11.23	Del_11p11.2	0.994	1
Amp_8q22.1	Del_5q21.1	0.994	1
Amp_12q23.1	Amp_Xp21.1	0.994	1
Amp_12q23.1	Del_8p23.2	0.994	1
Amp_12q23.1	Del_11q23.2	0.994	1
Amp_13q12.11	Amp_16q11.2	0.994	1
Amp_14q21.1	Amp_15q11.2	0.994	1
Amp_14q21.1	Del_11q22.3	0.994	1
Amp_15q11.2	Amp_16q11.2	0.994	1
Amp_16q11.2	Del_11q22.3	0.994	1
Amp_17q23.2	Del_8p21.3	0.994	1
Amp_20q13.2	Del_8p23.2	0.994	1
Amp_Xp22.11	Del_8p23.2	0.994	1
Amp_Xp21.1	Del_18q23	0.994	1
Del_1p31.3	Del_2q22.3	0.994	1
Del_1p22.1	Del_5q11.2	0.994	1
Del_1q42.3	Del_2q22.1	0.994	1
Del_1q42.3	Del_5q21.1	0.994	1
Del_1q42.3	Del_18q23	0.994	1
Del_2q22.3	Del_16q24.1	0.994	1
Del_5q21.1	Del_11q22.3	0.994	1
Del_6p25.1	Del_17q21.31	0.994	1
Del_6q14.3	Del_16q24.1	0.994	1
Del_11q23.2	Del_16q22.3	0.994	1
Del_13q14.13	Del_15q21.3	0.994	1
Del_15q21.3	Del_17q21.31	0.994	1
ANO4	L1CAM	0.995	1
ANO4	17p-Del	0.995	1
BHLHE22	Del_15q21.3	0.995	1
BRAF	MED15	0.995	1
BRAF	RPTN	0.995	1
BRAF	TNRC18	0.995	1
EPB41L3	Amp_Xq21.1	0.995	1
FOXA1	SMG7	0.995	1
FOXA1	7q-Amp	0.995	1
FOXA1	13q-Del	0.995	1
FOXA1	Amp_4q13.3	0.995	1
GRIA1	10p-Del	0.995	1
KDM6A	8p-Amp	0.995	1
LCE2D	Del_6p25.1	0.995	1
MUC17	Del_6p25.1	0.995	1
PIK3CA	Del_13q22.1	0.995	1
SALL1	Del_19q13.2	0.995	1
ZMYM3	16q-Del	0.995	1
ZMYM3	Del_19q13.2	0.995	1
CDKN1B	6q-Del	0.995	1
EDC4	8p-Amp	0.995	1
EDC4	Del_13q22.1	0.995	1
EDC4	Del_19q13.2	0.995	1
ERN1	Del_9p23	0.995	1
FAM111A	12p-Del	0.995	1
FAM111A	Del_9p23	0.995	1
L1CAM	SMG7	0.995	1
L1CAM	TP53BP1	0.995	1
L1CAM	Del_1q42.3	0.995	1
MYOT	Del_19q13.2	0.995	1
RPTN	Amp_Xp22.11	0.995	1
SMG7	TP53BP1	0.995	1
TCEB3	ZFHX3	0.995	1
TNRC18	Amp_Xp22.11	0.995	1
1q-Amp	6q-Del	0.995	1
3p-Amp	Amp_Xq27.1	0.995	1
3p-Amp	Del_13q14.13	0.995	1
3q-Amp	Amp_9q33.3	0.995	1
8q-Amp	Del_9p23	0.995	1
9q-Amp	Amp_13q12.11	0.995	1
9q-Amp	Amp_20q13.2	0.995	1
9q-Amp	Del_13q14.13	0.995	1
9q-Amp	Del_13q22.1	0.995	1
10p-Del	6q-Del	0.995	1
10p-Del	8p-Del	0.995	1
10p-Del	Del_10q23.31	0.995	1
13q-Del	17p-Del	0.995	1
13q-Del	18q-Del	0.995	1
13q-Del	Amp_9q33.3	0.995	1
16q-Del	Del_1p22.1	0.995	1
17p-Del	Del_5q11.2	0.995	1
18q-Del	6q-Del	0.995	1
22q-Del	6q-Del	0.995	1
22q-Del	8p-Del	0.995	1
6q-Del	Amp_17q23.2	0.995	1
6q-Del	Amp_Xq25	0.995	1
6q-Del	Del_8p23.2	0.995	1
Amp_3q26.2	Amp_Xp22.11	0.995	1
Amp_4q13.3	Amp_Xp21.1	0.995	1
Amp_4q13.3	Del_16q22.3	0.995	1
Amp_8q24.21	Del_11q23.2	0.995	1
Amp_9q33.3	Del_1p31.3	0.995	1
Amp_12q23.1	Amp_13q12.11	0.995	1
Amp_12q23.1	Amp_15q11.2	0.995	1
Amp_12q23.1	Del_2q22.1	0.995	1
Amp_13q12.11	Amp_Xp22.11	0.995	1
Amp_20q13.2	Amp_Xq27.1	0.995	1
Amp_20q13.2	Del_13q14.13	0.995	1
Amp_Xp21.1	Del_16q22.3	0.995	1
Amp_Xq21.1	Del_10q23.31	0.995	1
Del_2q22.1	Del_12p13.1	0.995	1
Del_2q22.3	Del_16q22.3	0.995	1
Del_4q28.2	Del_5q11.2	0.995	1
Del_5q11.2	Del_11q22.3	0.995	1
Del_13q14.13	Del_18q23	0.995	1
Del_17p13.1	Del_17q21.31	0.995	1
APC	22q-Del	0.996	1
APC	Amp_17q23.2	0.996	1
APC	Amp_Xq25	0.996	1
CTNNB1	PTEN	0.996	1
CTNNB1	RPL11	0.996	1
CTNNB1	SMAD4	0.996	1
EMG1	PIK3CA	0.996	1
EMG1	TP53	0.996	1
IDH1	ZMYM3	0.996	1
KDM6A	LMOD2	0.996	1
LILRB5	LMOD2	0.996	1
LILRB5	EHHADH	0.996	1
LILRB5	ZNF709	0.996	1
PIK3CA	RPL11	0.996	1
PIK3CA	SMAD4	0.996	1
PIK3CA	Del_16q24.1	0.996	1
PTEN	Del_1p31.3	0.996	1
PTEN	Del_13q22.1	0.996	1
SLC27A4	7p-Amp	0.996	1
SMAD4	TP53	0.996	1
SMAD4	Amp_1q22	0.996	1
TP53	Del_8p21.3	0.996	1
ZMYM3	CDKN1B	0.996	1
ZMYM3	ZNF709	0.996	1
ZMYM3	1q-Amp	0.996	1
ZMYM3	Amp_17q23.2	0.996	1
CNTNAP1	Amp_8q24.21	0.996	1
CR1L	18q-Del	0.996	1
CR1L	Amp_14q21.1	0.996	1
CR1L	Amp_16q11.2	0.996	1
EHHADH	FAM47C	0.996	1
ERN1	Del_11p11.2	0.996	1
LAMA3	13q-Del	0.996	1
MYOT	Del_12q24.32	0.996	1
ZNF709	Amp_16q11.2	0.996	1
7q-Amp	Amp_4q13.3	0.996	1
7q-Amp	Amp_Xp21.1	0.996	1
8p-Amp	Del_5q21.1	0.996	1
8p-Amp	Del_18q21.31	0.996	1
8q-Amp	Amp_Xp22.11	0.996	1
8q-Amp	Del_2q22.1	0.996	1
9q-Amp	Del_4q28.2	0.996	1
12p-Del	Del_17p13.1	0.996	1
13q-Del	Del_6q14.3	0.996	1
18p-Del	Del_5q13.2	0.996	1
18q-Del	22q-Del	0.996	1
18q-Del	Del_13q14.13	0.996	1
22q-Del	Amp_14q21.1	0.996	1
Xp-Del	Amp_8q24.21	0.996	1
Xq-Del	Amp_8q24.21	0.996	1
Amp_1q22	Del_16q24.1	0.996	1
Amp_3q21.3	Amp_12q23.1	0.996	1
Amp_3q21.3	Del_8p21.3	0.996	1
Amp_3q21.3	Del_11p11.2	0.996	1
Amp_3q26.2	Del_12q24.32	0.996	1
Amp_7q22.1	Amp_8p11.23	0.996	1
Amp_7q22.1	Del_5q11.2	0.996	1
Amp_8p11.23	Del_5q13.2	0.996	1
Amp_8q24.21	Amp_13q12.11	0.996	1
Amp_8q24.21	Amp_15q11.2	0.996	1
Amp_8q24.21	Del_17p13.1	0.996	1
Amp_9q33.3	Del_13q14.13	0.996	1
Amp_11q13.2	Del_8p23.2	0.996	1
Amp_12q23.1	Del_8p21.3	0.996	1
Amp_14q21.1	Amp_17q23.2	0.996	1
Amp_Xp21.1	Del_1p31.3	0.996	1
Del_2q22.1	Del_16q22.3	0.996	1
Del_3p13	Del_10q23.31	0.996	1
Del_4q28.2	Del_16q24.1	0.996	1
Del_5q21.1	Del_8p21.3	0.996	1
Del_6p25.1	Del_10q23.31	0.996	1
Del_9p23	Del_17p13.1	0.996	1
Del_15q21.3	Del_16q22.3	0.996	1
Del_18q23	Del_21q22.3	0.996	1
ANO4	NTM	0.997	1
ANO4	Amp_20q13.2	0.997	1
APC	Del_11p11.2	0.997	1
ATM	FOXA1	0.997	1
ATM	Del_12q24.32	0.997	1
BRAF	CDKN1B	0.997	1
BRAF	EHHADH	0.997	1
BRAF	ZNF709	0.997	1
BRAF	Amp_Xq21.1	0.997	1
BRAF	Amp_Xq25	0.997	1
EMG1	6q-Del	0.997	1
FOXA1	TNRC18	0.997	1
FOXA1	Amp_11q13.2	0.997	1
LILRB5	Amp_9q33.3	0.997	1
LMOD2	Amp_Xp22.11	0.997	1
MED12	NTM	0.997	1
MED12	OR4D5	0.997	1
MED12	BMP2K	0.997	1
MUC17	SLC27A4	0.997	1
MUC17	RPTN	0.997	1
MUC17	Xp-Del	0.997	1
MUC17	Xq-Del	0.997	1
PTEN	FAM120B	0.997	1
SLC27A4	7q-Amp	0.997	1
SLC27A4	Amp_7q22.1	0.997	1
SLC27A4	Del_1p31.3	0.997	1
SMAD4	8q-Amp	0.997	1
SPOP	Amp_7p14.3	0.997	1
TP53	Del_8p23.2	0.997	1
ZMYM3	Del_16q22.3	0.997	1
CDKN1B	Del_13q22.1	0.997	1
CNTNAP1	Amp_4q13.3	0.997	1
CNTNAP1	Amp_Xp21.1	0.997	1
CR1L	Amp_12q23.1	0.997	1
EHHADH	9q-Amp	0.997	1
EHHADH	Del_13q22.1	0.997	1
FAM111A	Del_6p25.1	0.997	1
L1CAM	MED15	0.997	1
L1CAM	RPTN	0.997	1
L1CAM	Amp_20q13.2	0.997	1
L1CAM	Del_1p22.1	0.997	1
L1CAM	Del_5q13.2	0.997	1
LAMA3	Xp-Del	0.997	1
LAMA3	Xq-Del	0.997	1
MED15	SMG7	0.997	1
MED15	TP53BP1	0.997	1
RPTN	SMG7	0.997	1
RPTN	TP53BP1	0.997	1
SMG7	TNRC18	0.997	1
TNRC18	17p-Del	0.997	1
TNRC18	Amp_4q13.3	0.997	1
TNRC18	Del_5q11.2	0.997	1
ZNF709	Amp_Xq27.1	0.997	1
1q-Amp	Amp_Xp22.11	0.997	1
3q-Amp	Amp_11q13.2	0.997	1
7p-Amp	Amp_1q22	0.997	1
7q-Amp	Amp_3q26.2	0.997	1
8p-Amp	9q-Amp	0.997	1
8p-Amp	Del_11p11.2	0.997	1
8q-Amp	13q-Del	0.997	1
8q-Amp	Del_11q23.2	0.997	1
8q-Amp	Del_18q21.31	0.997	1
9q-Amp	16q-Del	0.997	1
9q-Amp	22q-Del	0.997	1
9q-Amp	Amp_17q23.2	0.997	1
9q-Amp	Amp_Xq25	0.997	1
9q-Amp	Del_16q24.1	0.997	1
10p-Del	Amp_12q23.1	0.997	1
10p-Del	Del_13q22.1	0.997	1
10q-Del	17p-Del	0.997	1
13q-Del	Amp_8p11.23	0.997	1
13q-Del	Del_2q22.1	0.997	1
13q-Del	Del_6p25.1	0.997	1
13q-Del	Del_18q23	0.997	1
16q-Del	8p-Del	0.997	1
16q-Del	Del_5q11.2	0.997	1
16q-Del	Del_5q13.2	0.997	1
16q-Del	Del_18q23	0.997	1
17p-Del	8q-Del	0.997	1
17p-Del	Amp_15q11.2	0.997	1
17p-Del	Del_21q22.2	0.997	1
18p-Del	Del_1p31.3	0.997	1
18q-Del	Del_1p22.1	0.997	1
22q-Del	Amp_12q23.1	0.997	1
22q-Del	Amp_Xq27.1	0.997	1
8q-Del	Del_16q24.1	0.997	1
Xp-Del	Amp_8q22.1	0.997	1
Xp-Del	Del_5q11.2	0.997	1
Xp-Del	Del_6q14.3	0.997	1
Xq-Del	Amp_8q22.1	0.997	1
Xq-Del	Del_5q11.2	0.997	1
Xq-Del	Del_6q14.3	0.997	1
Amp_3q21.3	Amp_9q33.3	0.997	1
Amp_3q21.3	Del_12q24.32	0.997	1
Amp_3q26.2	Amp_Xp21.1	0.997	1
Amp_4q13.3	Amp_13q12.11	0.997	1
Amp_4q13.3	Amp_15q11.2	0.997	1
Amp_7p14.3	Del_9p23	0.997	1
Amp_8p11.23	Amp_Xp21.1	0.997	1
Amp_8q22.1	Amp_13q12.11	0.997	1
Amp_8q24.21	Del_11p11.2	0.997	1
Amp_8q24.21	Del_13q22.1	0.997	1
Amp_9q33.3	Amp_14q21.1	0.997	1
Amp_9q33.3	Del_11q22.3	0.997	1
Amp_12q23.1	Del_12p13.1	0.997	1
Amp_15q11.2	Amp_Xp21.1	0.997	1
Amp_16q11.2	Del_12q24.32	0.997	1
Amp_17q23.2	Amp_Xp22.11	0.997	1
Amp_17q23.2	Amp_Xq27.1	0.997	1
Amp_20q13.2	Del_5q21.1	0.997	1
Amp_Xq25	Amp_Xq27.1	0.997	1
Del_1p22.1	Del_1q42.3	0.997	1
Del_1p22.1	Del_5q13.2	0.997	1
Del_3p13	Del_17q21.31	0.997	1
Del_4q28.2	Del_12q24.32	0.997	1
Del_5q11.2	Del_10q23.31	0.997	1
Del_5q13.2	Del_12q24.32	0.997	1
Del_5q13.2	Del_13q14.13	0.997	1
Del_5q13.2	Del_17p13.1	0.997	1
Del_5q13.2	Del_21q22.2	0.997	1
Del_6q14.3	Del_11q22.3	0.997	1
Del_8p23.2	Del_17q21.31	0.997	1
Del_13q14.13	Del_18q21.31	0.997	1
ANO4	22q-Del	0.998	1
ANO4	Amp_17q23.2	0.998	1
ANO4	Amp_Xq25	0.998	1
APC	8p-Del	0.998	1
APC	Del_5q11.2	0.998	1
APC	Del_6p25.1	0.998	1
APC	Del_8p23.2	0.998	1
ATM	Del_13q14.13	0.998	1
ATM	Del_13q22.1	0.998	1
BRAF	MLLT10	0.998	1
EMG1	SALL1	0.998	1
EMG1	18q-Del	0.998	1
EMG1	Del_2q22.3	0.998	1
EMG1	Del_17p13.1	0.998	1
EPB41L3	POM121	0.998	1
FOXA1	7p-Amp	0.998	1
FOXA1	Amp_7p14.3	0.998	1
GRIA1	EDC4	0.998	1
HRAS	8q-Del	0.998	1
HRAS	Amp_4q13.3	0.998	1
IDH1	MED15	0.998	1
IDH1	10q-Del	0.998	1
LILRB5	ESCO1	0.998	1
LMOD2	L1CAM	0.998	1
LMOD2	Amp_Xp21.1	0.998	1
MED12	CDKN1B	0.998	1
MED12	1q-Amp	0.998	1
MED12	10p-Del	0.998	1
MED12	12p-Del	0.998	1
NTM	OR4D5	0.998	1
NTM	TNRC18	0.998	1
NTM	1q-Amp	0.998	1
OR4D5	1q-Amp	0.998	1
OR4D5	Amp_15q11.2	0.998	1
OR4D5	Amp_Xq21.1	0.998	1
OR4D5	Amp_Xq25	0.998	1
OR4P4	L1CAM	0.998	1
OR4P4	10q-Del	0.998	1
OR4P4	Del_1q42.3	0.998	1
PIK3CA	EDC4	0.998	1
PTEN	RAG1	0.998	1
SALL1	SMAD4	0.998	1
SLC27A4	Del_1p22.1	0.998	1
SPOP	3p-Amp	0.998	1
SPOP	Xp-Del	0.998	1
SPOP	Xq-Del	0.998	1
SPOP	Amp_3q21.3	0.998	1
TP53	Del_16q22.3	0.998	1
TP53	Del_21q22.3	0.998	1
CDKN1B	BMP2K	0.998	1
CDKN1B	L1CAM	0.998	1
CDKN1B	MED15	0.998	1
CDKN1B	RPTN	0.998	1
CDKN1B	SMG7	0.998	1
CDKN1B	Del_12p13.1	0.998	1
BMP2K	10p-Del	0.998	1
CNTNAP1	22q-Del	0.998	1
CNTNAP1	Amp_13q12.11	0.998	1
CNTNAP1	Amp_15q11.2	0.998	1
CR1L	17p-Del	0.998	1
CR1L	Amp_4q13.3	0.998	1
EDC4	6q-Del	0.998	1
EDC4	Del_18q21.31	0.998	1
EDC4	Del_18q23	0.998	1
EHHADH	Xp-Del	0.998	1
EHHADH	Xq-Del	0.998	1
ERN1	Del_5q11.2	0.998	1
ESCO1	Amp_Xp22.11	0.998	1
FAM47C	MLLT10	0.998	1
FAM47C	TCERG1	0.998	1
KIRREL	Del_1q42.3	0.998	1
L1CAM	ZNF709	0.998	1
L1CAM	22q-Del	0.998	1
L1CAM	Amp_17q23.2	0.998	1
L1CAM	Amp_Xq25	0.998	1
LAMA3	8p-Amp	0.998	1
LAMA3	Del_2q22.1	0.998	1
MED15	ZNF709	0.998	1
MED15	3p-Amp	0.998	1
MED15	8q-Del	0.998	1
MED15	Amp_3q26.2	0.998	1
MLLT10	Amp_12q23.1	0.998	1
MLLT10	Amp_14q21.1	0.998	1
MLLT10	Amp_16q11.2	0.998	1
RPTN	3p-Amp	0.998	1
SMG7	ZNF709	0.998	1
TCERG1	Amp_Xq27.1	0.998	1
TNRC18	10q-Del	0.998	1
TNRC18	Del_1p31.3	0.998	1
TP53BP1	ZNF709	0.998	1
TP53BP1	1q-Amp	0.998	1
TP53BP1	Del_11q22.3	0.998	1
ZFHX3	Amp_3q21.3	0.998	1
ZFHX3	Amp_3q26.2	0.998	1
ZFHX3	Del_4q28.2	0.998	1
ZFHX3	Del_13q22.1	0.998	1
ZNF709	Amp_15q11.2	0.998	1
1q-Amp	Amp_Xp21.1	0.998	1
3p-Amp	Amp_8p11.23	0.998	1
3p-Amp	Amp_17q23.2	0.998	1
3q-Amp	Del_8p21.3	0.998	1
7q-Amp	Amp_11q13.2	0.998	1
7q-Amp	Amp_20q13.2	0.998	1
7q-Amp	Del_8p21.3	0.998	1
8p-Amp	Amp_4q13.3	0.998	1
8p-Amp	Del_2q22.3	0.998	1
8p-Amp	Del_8p23.2	0.998	1
8q-Amp	Amp_1q22	0.998	1
8q-Amp	Amp_4q13.3	0.998	1
8q-Amp	Del_11p11.2	0.998	1
9q-Amp	Del_11p11.2	0.998	1
10q-Del	13q-Del	0.998	1
10q-Del	Amp_13q12.11	0.998	1
10q-Del	Amp_Xq21.1	0.998	1
10q-Del	Del_1p31.3	0.998	1
10q-Del	Del_1p22.1	0.998	1
10q-Del	Del_8p21.3	0.998	1
10q-Del	Del_17p13.1	0.998	1
13q-Del	8p-Del	0.998	1
13q-Del	8q-Del	0.998	1
13q-Del	Xp-Del	0.998	1
13q-Del	Xq-Del	0.998	1
13q-Del	Amp_13q12.11	0.998	1
17p-Del	Amp_8q24.21	0.998	1
17p-Del	Del_13q14.13	0.998	1
17p-Del	Del_19q13.2	0.998	1
18p-Del	8q-Del	0.998	1
18p-Del	Del_8p23.2	0.998	1
18p-Del	Del_10q23.31	0.998	1
18p-Del	Del_12p13.1	0.998	1
18q-Del	Del_1q42.3	0.998	1
18q-Del	Del_13q22.1	0.998	1
22q-Del	Amp_4q13.3	0.998	1
22q-Del	Amp_13q12.11	0.998	1
22q-Del	Amp_15q11.2	0.998	1
22q-Del	Amp_20q13.2	0.998	1
22q-Del	Amp_Xp21.1	0.998	1
6q-Del	Del_6p25.1	0.998	1
8p-Del	Del_13q22.1	0.998	1
8p-Del	Del_17q21.31	0.998	1
8q-Del	Amp_13q12.11	0.998	1
8q-Del	Amp_Xq21.1	0.998	1
Xp-Del	Amp_13q12.11	0.998	1
Xp-Del	Del_11q23.2	0.998	1
Xq-Del	Amp_13q12.11	0.998	1
Xq-Del	Del_11q23.2	0.998	1
Amp_1q22	Amp_7p14.3	0.998	1
Amp_1q22	Amp_7q22.1	0.998	1
Amp_3q21.3	Del_5q13.2	0.998	1
Amp_3q21.3	Del_11q23.2	0.998	1
Amp_3q21.3	Del_13q14.13	0.998	1
Amp_3q21.3	Del_13q22.1	0.998	1
Amp_3q26.2	Amp_8p11.23	0.998	1
Amp_3q26.2	Amp_13q12.11	0.998	1
Amp_3q26.2	Del_13q14.13	0.998	1
Amp_4q13.3	Amp_17q23.2	0.998	1
Amp_7p14.3	Del_5q13.2	0.998	1
Amp_8p11.23	Amp_13q12.11	0.998	1
Amp_8q22.1	Del_11p11.2	0.998	1
Amp_8q22.1	Del_13q22.1	0.998	1
Amp_8q22.1	Del_18q21.31	0.998	1
Amp_8q24.21	Amp_Xp22.11	0.998	1
Amp_8q24.21	Del_5q21.1	0.998	1
Amp_11q13.2	Del_11q23.2	0.998	1
Amp_12q23.1	Del_6q14.3	0.998	1
Amp_12q23.1	Del_12q24.32	0.998	1
Amp_13q12.11	Amp_15q11.2	0.998	1
Amp_13q12.11	Amp_17q23.2	0.998	1
Amp_13q12.11	Del_11q23.2	0.998	1
Amp_20q13.2	Amp_Xq25	0.998	1
Amp_Xp21.1	Amp_Xq25	0.998	1
Del_1p31.3	Del_8p21.3	0.998	1
Del_1p22.1	Del_2q22.1	0.998	1
Del_1q42.3	Del_2q22.3	0.998	1
Del_1q42.3	Del_10q23.31	0.998	1
Del_5q11.2	Del_18q23	0.998	1
Del_5q13.2	Del_8p23.2	0.998	1
Del_5q13.2	Del_11q22.3	0.998	1
Del_6p25.1	Del_21q22.3	0.998	1
Del_8p23.2	Del_9p23	0.998	1
Del_10q23.31	Del_13q22.1	0.998	1
Del_11q22.3	Del_13q22.1	0.998	1
Del_13q14.13	Del_17p13.1	0.998	1
Del_13q22.1	Del_16q24.1	0.998	1
ANO4	KIDINS220	0.999	1
ANO4	Del_6p25.1	0.999	1
APC	BHLHE22	0.999	1
APC	7p-Amp	0.999	1
APC	6q-Del	0.999	1
APC	Del_6q14.3	0.999	1
APC	Del_13q14.13	0.999	1
ATM	1q-Amp	0.999	1
BHLHE22	Amp_12q23.1	0.999	1
BRAF	ERN1	0.999	1
CTNNB1	Del_13q22.1	0.999	1
FOXA1	Amp_3q26.2	0.999	1
FOXA1	Amp_7q22.1	0.999	1
FOXA1	Amp_16q11.2	0.999	1
FOXA1	Del_13q22.1	0.999	1
GRIA1	SALL1	0.999	1
HRAS	Del_1p31.3	0.999	1
IDH1	RPL11	0.999	1
KIDINS220	SALL1	0.999	1
KIDINS220	LAMA3	0.999	1
LCE2D	CR1L	0.999	1
LCE2D	TP53BP1	0.999	1
LCE2D	Del_1q42.3	0.999	1
LCE2D	Del_13q22.1	0.999	1
LILRB5	Amp_7p14.3	0.999	1
LMOD2	1q-Amp	0.999	1
MUC17	Amp_9q33.3	0.999	1
NKX3-1	Amp_Xq21.1	0.999	1
OR4D5	MLLT10	0.999	1
OR4P4	10p-Del	0.999	1
PIK3CA	8p-Amp	0.999	1
PIK3CA	Amp_8q22.1	0.999	1
PIK3CA	Del_1p31.3	0.999	1
PIK3CA	Del_5q11.2	0.999	1
SALL1	EDC4	0.999	1
SLC27A4	ZFHX3	0.999	1
SLC27A4	Del_6p25.1	0.999	1
SLC27A4	Del_12q24.32	0.999	1
SMAD4	22q-Del	0.999	1
SMAD4	Xp-Del	0.999	1
SMAD4	Xq-Del	0.999	1
SMAD4	Amp_4q13.3	0.999	1
SMAD4	Del_13q22.1	0.999	1
SPOP	ERN1	0.999	1
SPOP	7q-Amp	0.999	1
ZMYM3	MYOT	0.999	1
CDKN1B	EHHADH	0.999	1
CDKN1B	ZNF709	0.999	1
CDKN1B	1q-Amp	0.999	1
CNTNAP1	Amp_3q21.3	0.999	1
CR1L	KIRREL	0.999	1
CR1L	MLLT10	0.999	1
CR1L	Del_21q22.2	0.999	1
ERN1	LAMA3	0.999	1
ERN1	Del_2q22.1	0.999	1
ERN1	Del_5q13.2	0.999	1
ESCO1	RPTN	0.999	1
FAM120B	Amp_14q21.1	0.999	1
L1CAM	MYOT	0.999	1
LAMA3	POM121	0.999	1
LAMA3	Del_11p11.2	0.999	1
MED15	MYOT	0.999	1
MLLT10	Amp_Xq21.1	0.999	1
MLLT10	Amp_Xq25	0.999	1
MYOT	RPTN	0.999	1
MYOT	SMG7	0.999	1
MYOT	TP53BP1	0.999	1
MYOT	8q-Del	0.999	1
RPTN	Del_4q28.2	0.999	1
SMG7	Del_5q21.1	0.999	1
TCEB3	TP53BP1	0.999	1
TCEB3	Amp_Xq21.1	0.999	1
1q-Amp	10p-Del	0.999	1
1q-Amp	Del_5q11.2	0.999	1
1q-Amp	Del_11q22.3	0.999	1
1q-Amp	Del_11q23.2	0.999	1
3p-Amp	Del_2q22.1	0.999	1
3p-Amp	Del_4q28.2	0.999	1
3p-Amp	Del_11p11.2	0.999	1
3p-Amp	Del_12q24.32	0.999	1
3p-Amp	Del_13q22.1	0.999	1
3q-Amp	13q-Del	0.999	1
3q-Amp	16q-Del	0.999	1
3q-Amp	6q-Del	0.999	1
3q-Amp	Amp_8p11.23	0.999	1
3q-Amp	Amp_8q22.1	0.999	1
3q-Amp	Del_4q28.2	0.999	1
3q-Amp	Del_13q14.13	0.999	1
7p-Amp	16q-Del	0.999	1
7p-Amp	Amp_8p11.23	0.999	1
7p-Amp	Amp_9q33.3	0.999	1
7p-Amp	Amp_16q11.2	0.999	1
7p-Amp	Del_5q13.2	0.999	1
7q-Amp	Amp_1q22	0.999	1
7q-Amp	Amp_9q33.3	0.999	1
7q-Amp	Amp_16q11.2	0.999	1
8p-Amp	13q-Del	0.999	1
8p-Amp	Amp_11q13.2	0.999	1
8p-Amp	Del_13q14.13	0.999	1
8p-Amp	Del_13q22.1	0.999	1
8p-Amp	Del_16q22.3	0.999	1
8q-Amp	Xp-Del	0.999	1
8q-Amp	Xq-Del	0.999	1
8q-Amp	Amp_7p14.3	0.999	1
8q-Amp	Amp_7q22.1	0.999	1
8q-Amp	Del_4q28.2	0.999	1
9q-Amp	Del_16q22.3	0.999	1
10p-Del	Del_4q28.2	0.999	1
10p-Del	Del_6q14.3	0.999	1
12p-Del	Del_5q13.2	0.999	1
12p-Del	Del_17q21.31	0.999	1
13q-Del	6q-Del	0.999	1
13q-Del	Amp_8q24.21	0.999	1
13q-Del	Amp_16q11.2	0.999	1
13q-Del	Del_16q24.1	0.999	1
13q-Del	Del_17p13.1	0.999	1
16q-Del	Amp_7p14.3	0.999	1
16q-Del	Amp_9q33.3	0.999	1
16q-Del	Del_1p31.3	0.999	1
16q-Del	Del_4q28.2	0.999	1
16q-Del	Del_13q22.1	0.999	1
16q-Del	Del_18q21.31	0.999	1
17p-Del	6q-Del	0.999	1
17p-Del	Amp_16q11.2	0.999	1
17p-Del	Del_6q14.3	0.999	1
17p-Del	Del_16q22.3	0.999	1
18p-Del	Del_9p23	0.999	1
18q-Del	Amp_4q13.3	0.999	1
18q-Del	Del_1p31.3	0.999	1
18q-Del	Del_5q13.2	0.999	1
18q-Del	Del_12p13.1	0.999	1
22q-Del	Amp_8p11.23	0.999	1
22q-Del	Amp_8q24.21	0.999	1
22q-Del	Amp_17q23.2	0.999	1
22q-Del	Amp_Xq25	0.999	1
22q-Del	Del_1p22.1	0.999	1
22q-Del	Del_9p23	0.999	1
22q-Del	Del_11q22.3	0.999	1
22q-Del	Del_18q21.31	0.999	1
22q-Del	Del_19q13.2	0.999	1
6q-Del	Amp_3q21.3	0.999	1
6q-Del	Amp_7q22.1	0.999	1
6q-Del	Amp_8q22.1	0.999	1
6q-Del	Del_1p31.3	0.999	1
8p-Del	Amp_20q13.2	0.999	1
8p-Del	Del_6p25.1	0.999	1
8q-Del	Del_9p23	0.999	1
Xp-Del	Del_5q13.2	0.999	1
Xp-Del	Del_11p11.2	0.999	1
Xp-Del	Del_11q22.3	0.999	1
Xq-Del	Del_5q13.2	0.999	1
Xq-Del	Del_11p11.2	0.999	1
Xq-Del	Del_11q22.3	0.999	1
Amp_1q22	Amp_3q26.2	0.999	1
Amp_1q22	Amp_12q23.1	0.999	1
Amp_1q22	Amp_16q11.2	0.999	1
Amp_1q22	Amp_Xp22.11	0.999	1
Amp_3q21.3	Amp_13q12.11	0.999	1
Amp_3q21.3	Amp_20q13.2	0.999	1
Amp_3q21.3	Del_4q28.2	0.999	1
Amp_3q21.3	Del_6q14.3	0.999	1
Amp_3q26.2	Amp_8q22.1	0.999	1
Amp_3q26.2	Amp_17q23.2	0.999	1
Amp_3q26.2	Del_8p21.3	0.999	1
Amp_3q26.2	Del_13q22.1	0.999	1
Amp_4q13.3	Amp_8q22.1	0.999	1
Amp_4q13.3	Amp_9q33.3	0.999	1
Amp_4q13.3	Amp_11q13.2	0.999	1
Amp_7p14.3	Amp_16q11.2	0.999	1
Amp_7p14.3	Del_8p21.3	0.999	1
Amp_7q22.1	Amp_16q11.2	0.999	1
Amp_7q22.1	Amp_17q23.2	0.999	1
Amp_7q22.1	Del_5q13.2	0.999	1
Amp_7q22.1	Del_8p21.3	0.999	1
Amp_8q22.1	Amp_Xp22.11	0.999	1
Amp_8q22.1	Del_4q28.2	0.999	1
Amp_8q22.1	Del_5q13.2	0.999	1
Amp_8q22.1	Del_11q22.3	0.999	1
Amp_9q33.3	Amp_20q13.2	0.999	1
Amp_9q33.3	Del_5q11.2	0.999	1
Amp_9q33.3	Del_8p23.2	0.999	1
Amp_9q33.3	Del_8p21.3	0.999	1
Amp_9q33.3	Del_13q22.1	0.999	1
Amp_9q33.3	Del_17p13.1	0.999	1
Amp_9q33.3	Del_18q23	0.999	1
Amp_11q13.2	Amp_12q23.1	0.999	1
Amp_11q13.2	Amp_Xp21.1	0.999	1
Amp_13q12.11	Del_11q22.3	0.999	1
Amp_14q21.1	Del_11q23.2	0.999	1
Amp_15q11.2	Del_11q22.3	0.999	1
Amp_16q11.2	Del_13q14.13	0.999	1
Amp_16q11.2	Del_13q22.1	0.999	1
Amp_16q11.2	Del_16q24.1	0.999	1
Amp_17q23.2	Amp_Xq25	0.999	1
Amp_17q23.2	Del_8p23.2	0.999	1
Amp_17q23.2	Del_13q14.13	0.999	1
Amp_17q23.2	Del_15q21.3	0.999	1
Amp_Xq21.1	Amp_Xq25	0.999	1
Del_1p31.3	Del_8p23.2	0.999	1
Del_1p31.3	Del_13q14.13	0.999	1
Del_1p31.3	Del_18q23	0.999	1
Del_1p22.1	Del_19q13.2	0.999	1
Del_1q42.3	Del_12p13.1	0.999	1
Del_1q42.3	Del_18q21.31	0.999	1
Del_2q22.1	Del_5q11.2	0.999	1
Del_3p13	Del_8p21.3	0.999	1
Del_3p13	Del_12p13.1	0.999	1
Del_5q11.2	Del_11p11.2	0.999	1
Del_5q11.2	Del_12p13.1	0.999	1
Del_5q11.2	Del_17p13.1	0.999	1
Del_5q13.2	Del_9p23	0.999	1
Del_5q13.2	Del_18q21.31	0.999	1
Del_5q21.1	Del_12q24.32	0.999	1
Del_6p25.1	Del_17p13.1	0.999	1
Del_6q14.3	Del_11q23.2	0.999	1
Del_6q14.3	Del_16q22.3	0.999	1
Del_8p23.2	Del_12q24.32	0.999	1
Del_8p23.2	Del_21q22.3	0.999	1
Del_9p23	Del_18q23	0.999	1
Del_10q23.31	Del_17q21.31	0.999	1
Del_11q23.2	Del_13q22.1	0.999	1
Del_11q23.2	Del_16q24.1	0.999	1
Del_12p13.1	Del_16q22.3	0.999	1
Del_12p13.1	Del_17p13.1	0.999	1
Del_13q14.13	Del_21q22.3	0.999	1
Del_13q22.1	Del_16q22.3	0.999	1
Del_15q21.3	Del_18q21.31	0.999	1
Del_16q24.1	Del_17q21.31	0.999	1
Del_18q21.31	Del_19q13.2	0.999	1
ANO4	Amp_Xq27.1	1	1
APC	SMG7	1	1
APC	Amp_20q13.2	1	1
APC	Del_5q13.2	1	1
APC	Del_5q21.1	1	1
APC	Del_8p21.3	1	1
ATM	13q-Del	1	1
ATM	Amp_16q11.2	1	1
BRAF	OR4D5	1	1
BRAF	MYOT	1	1
BRAF	SMG7	1	1
CTNNB1	PIK3CA	1	1
EMG1	GRIA1	1	1
EMG1	EDC4	1	1
EMG1	TCERG1	1	1
EMG1	18p-Del	1	1
FOXA1	3p-Amp	1	1
FOXA1	3q-Amp	1	1
FOXA1	8p-Amp	1	1
FOXA1	8q-Amp	1	1
FOXA1	Amp_3q21.3	1	1
FOXA1	Amp_8q22.1	1	1
FOXA1	Amp_8q24.21	1	1
FOXA1	Amp_20q13.2	1	1
FOXA1	Del_2q22.1	1	1
FOXA1	Del_4q28.2	1	1
FOXA1	Del_5q21.1	1	1
FOXA1	Del_6q14.3	1	1
FOXA1	Del_11p11.2	1	1
FOXA1	Del_13q14.13	1	1
KDM6A	LAMA3	1	1
KIDINS220	SMAD4	1	1
KIDINS220	EDC4	1	1
LCE2D	Del_1p22.1	1	1
LILRB5	9q-Amp	1	1
MUC17	9q-Amp	1	1
NKX3-1	TCEB3	1	1
PIK3CA	8q-Amp	1	1
PTEN	Del_10q23.31	1	1
RPL11	POM121	1	1
SLC27A4	TCEB3	1	1
SLC27A4	TP53BP1	1	1
SMAD4	EDC4	1	1
SMAD4	18q-Del	1	1
SMAD4	Del_12p13.1	1	1
SMAD4	Del_13q14.13	1	1
SMAD4	Del_18q21.31	1	1
SMAD4	Del_18q23	1	1
SPOP	3q-Amp	1	1
SPOP	7p-Amp	1	1
SPOP	Amp_7q22.1	1	1
SPOP	Del_2q22.1	1	1
SPOP	Del_2q22.3	1	1
SPOP	Del_4q28.2	1	1
SPOP	Del_5q11.2	1	1
SPOP	Del_5q13.2	1	1
SPOP	Del_5q21.1	1	1
SPOP	Del_6q14.3	1	1
SPOP	Del_11p11.2	1	1
SPOP	Del_13q14.13	1	1
SPOP	Del_13q22.1	1	1
TP53	17p-Del	1	1
TP53	18p-Del	1	1
TP53	18q-Del	1	1
TP53	Del_10q23.31	1	1
TP53	Del_12p13.1	1	1
TP53	Del_17p13.1	1	1
TP53	Del_18q21.31	1	1
TP53	Del_18q23	1	1
CDKN1B	MYOT	1	1
CDKN1B	TP53BP1	1	1
CDKN1B	10p-Del	1	1
BMP2K	FAM47C	1	1
CNTNAP1	Amp_1q22	1	1
CNTNAP1	Amp_8p11.23	1	1
CNTNAP1	Amp_11q13.2	1	1
CNTNAP1	Amp_12q23.1	1	1
CNTNAP1	Amp_14q21.1	1	1
CR1L	FAM111A	1	1
CR1L	18p-Del	1	1
CR1L	Del_1q42.3	1	1
EDC4	17p-Del	1	1
EHHADH	ERN1	1	1
ERN1	KIRREL	1	1
FAM111A	KIRREL	1	1
FAM111A	Del_1q42.3	1	1
FAM111A	Del_8p23.2	1	1
FAM111A	Del_8p21.3	1	1
FAM111A	Del_10q23.31	1	1
FAM111A	Del_12p13.1	1	1
FAM111A	Del_15q21.3	1	1
MED15	RPTN	1	1
MYOT	ZNF709	1	1
RPTN	ZFHX3	1	1
RPTN	ZNF709	1	1
TCEB3	12p-Del	1	1
TNRC18	Del_17p13.1	1	1
ZFHX3	3q-Amp	1	1
1q-Amp	Amp_1q22	1	1
1q-Amp	Amp_11q13.2	1	1
3p-Amp	3q-Amp	1	1
3p-Amp	7p-Amp	1	1
3p-Amp	7q-Amp	1	1
3p-Amp	6q-Del	1	1
3p-Amp	Amp_3q21.3	1	1
3p-Amp	Amp_3q26.2	1	1
3p-Amp	Amp_4q13.3	1	1
3p-Amp	Amp_7p14.3	1	1
3p-Amp	Amp_7q22.1	1	1
3p-Amp	Amp_8q22.1	1	1
3p-Amp	Amp_8q24.21	1	1
3p-Amp	Amp_16q11.2	1	1
3p-Amp	Amp_20q13.2	1	1
3p-Amp	Del_5q21.1	1	1
3q-Amp	7p-Amp	1	1
3q-Amp	7q-Amp	1	1
3q-Amp	Amp_3q21.3	1	1
3q-Amp	Amp_3q26.2	1	1
3q-Amp	Amp_4q13.3	1	1
3q-Amp	Amp_7p14.3	1	1
3q-Amp	Amp_7q22.1	1	1
3q-Amp	Amp_16q11.2	1	1
3q-Amp	Amp_20q13.2	1	1
3q-Amp	Del_2q22.1	1	1
3q-Amp	Del_5q21.1	1	1
3q-Amp	Del_6q14.3	1	1
3q-Amp	Del_11p11.2	1	1
3q-Amp	Del_12q24.32	1	1
3q-Amp	Del_13q22.1	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	8p-Amp	1	1
7p-Amp	8q-Amp	1	1
7p-Amp	13q-Del	1	1
7p-Amp	Xp-Del	1	1
7p-Amp	Xq-Del	1	1
7p-Amp	Amp_3q21.3	1	1
7p-Amp	Amp_3q26.2	1	1
7p-Amp	Amp_4q13.3	1	1
7p-Amp	Amp_7p14.3	1	1
7p-Amp	Amp_7q22.1	1	1
7p-Amp	Amp_8q22.1	1	1
7p-Amp	Amp_8q24.21	1	1
7p-Amp	Amp_11q13.2	1	1
7p-Amp	Amp_13q12.11	1	1
7p-Amp	Amp_20q13.2	1	1
7p-Amp	Del_2q22.1	1	1
7p-Amp	Del_2q22.3	1	1
7p-Amp	Del_4q28.2	1	1
7p-Amp	Del_5q11.2	1	1
7p-Amp	Del_5q21.1	1	1
7p-Amp	Del_6q14.3	1	1
7p-Amp	Del_8p21.3	1	1
7p-Amp	Del_11p11.2	1	1
7p-Amp	Del_12q24.32	1	1
7p-Amp	Del_13q14.13	1	1
7p-Amp	Del_13q22.1	1	1
7q-Amp	8p-Amp	1	1
7q-Amp	8q-Amp	1	1
7q-Amp	13q-Del	1	1
7q-Amp	16q-Del	1	1
7q-Amp	Xp-Del	1	1
7q-Amp	Xq-Del	1	1
7q-Amp	Amp_3q21.3	1	1
7q-Amp	Amp_7p14.3	1	1
7q-Amp	Amp_7q22.1	1	1
7q-Amp	Amp_8q22.1	1	1
7q-Amp	Amp_8q24.21	1	1
7q-Amp	Amp_13q12.11	1	1
7q-Amp	Del_2q22.1	1	1
7q-Amp	Del_2q22.3	1	1
7q-Amp	Del_4q28.2	1	1
7q-Amp	Del_5q11.2	1	1
7q-Amp	Del_5q13.2	1	1
7q-Amp	Del_5q21.1	1	1
7q-Amp	Del_6q14.3	1	1
7q-Amp	Del_11p11.2	1	1
7q-Amp	Del_12q24.32	1	1
7q-Amp	Del_13q14.13	1	1
7q-Amp	Del_13q22.1	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	16q-Del	1	1
8p-Amp	Xp-Del	1	1
8p-Amp	Xq-Del	1	1
8p-Amp	Amp_7p14.3	1	1
8p-Amp	Amp_7q22.1	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8q22.1	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Del_2q22.1	1	1
8p-Amp	Del_4q28.2	1	1
8p-Amp	Del_5q11.2	1	1
8p-Amp	Del_5q13.2	1	1
8p-Amp	Del_6q14.3	1	1
8p-Amp	Del_16q24.1	1	1
8q-Amp	9q-Amp	1	1
8q-Amp	16q-Del	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8q22.1	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_9q33.3	1	1
8q-Amp	Amp_11q13.2	1	1
8q-Amp	Amp_16q11.2	1	1
8q-Amp	Del_5q11.2	1	1
8q-Amp	Del_6q14.3	1	1
8q-Amp	Del_8p23.2	1	1
8q-Amp	Del_8p21.3	1	1
8q-Amp	Del_11q22.3	1	1
8q-Amp	Del_16q22.3	1	1
8q-Amp	Del_16q24.1	1	1
9q-Amp	Xp-Del	1	1
9q-Amp	Xq-Del	1	1
9q-Amp	Amp_8q22.1	1	1
9q-Amp	Amp_8q24.21	1	1
9q-Amp	Amp_9q33.3	1	1
9q-Amp	Del_5q11.2	1	1
9q-Amp	Del_8p21.3	1	1
9q-Amp	Del_17p13.1	1	1
10p-Del	10q-Del	1	1
10p-Del	Del_8p21.3	1	1
10p-Del	Del_12p13.1	1	1
10p-Del	Del_12q24.32	1	1
10q-Del	8q-Del	1	1
10q-Del	Del_6p25.1	1	1
10q-Del	Del_10q23.31	1	1
12p-Del	8p-Del	1	1
12p-Del	Del_8p23.2	1	1
12p-Del	Del_8p21.3	1	1
12p-Del	Del_12p13.1	1	1
12p-Del	Del_16q24.1	1	1
12p-Del	Del_21q22.3	1	1
13q-Del	Amp_4q13.3	1	1
13q-Del	Amp_7p14.3	1	1
13q-Del	Amp_7q22.1	1	1
13q-Del	Amp_8q22.1	1	1
13q-Del	Amp_11q13.2	1	1
13q-Del	Del_2q22.3	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_8p21.3	1	1
13q-Del	Del_13q14.13	1	1
13q-Del	Del_13q22.1	1	1
16q-Del	17p-Del	1	1
16q-Del	18p-Del	1	1
16q-Del	18q-Del	1	1
16q-Del	Amp_7q22.1	1	1
16q-Del	Amp_8q22.1	1	1
16q-Del	Amp_8q24.21	1	1
16q-Del	Amp_16q11.2	1	1
16q-Del	Del_2q22.3	1	1
16q-Del	Del_6q14.3	1	1
16q-Del	Del_8p23.2	1	1
16q-Del	Del_8p21.3	1	1
16q-Del	Del_11p11.2	1	1
16q-Del	Del_11q22.3	1	1
16q-Del	Del_12q24.32	1	1
16q-Del	Del_13q14.13	1	1
16q-Del	Del_16q22.3	1	1
16q-Del	Del_16q24.1	1	1
16q-Del	Del_17p13.1	1	1
17p-Del	18p-Del	1	1
17p-Del	18q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	Amp_8q22.1	1	1
17p-Del	Amp_17q23.2	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_8p21.3	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_12p13.1	1	1
17p-Del	Del_16q24.1	1	1
17p-Del	Del_17p13.1	1	1
17p-Del	Del_18q21.31	1	1
17p-Del	Del_18q23	1	1
17p-Del	Del_21q22.3	1	1
18p-Del	18q-Del	1	1
18p-Del	Del_1q42.3	1	1
18p-Del	Del_16q22.3	1	1
18p-Del	Del_16q24.1	1	1
18p-Del	Del_17p13.1	1	1
18p-Del	Del_18q21.31	1	1
18p-Del	Del_18q23	1	1
18q-Del	8p-Del	1	1
18q-Del	8q-Del	1	1
18q-Del	Del_5q11.2	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_8p21.3	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_10q23.31	1	1
18q-Del	Del_15q21.3	1	1
18q-Del	Del_16q22.3	1	1
18q-Del	Del_16q24.1	1	1
18q-Del	Del_17p13.1	1	1
18q-Del	Del_18q21.31	1	1
18q-Del	Del_18q23	1	1
22q-Del	Amp_9q33.3	1	1
22q-Del	Del_18q23	1	1
6q-Del	Amp_4q13.3	1	1
6q-Del	Amp_20q13.2	1	1
6q-Del	Del_6q14.3	1	1
6q-Del	Del_11p11.2	1	1
6q-Del	Del_13q14.13	1	1
6q-Del	Del_13q22.1	1	1
6q-Del	Del_18q21.31	1	1
6q-Del	Del_18q23	1	1
8p-Del	8q-Del	1	1
8p-Del	Amp_17q23.2	1	1
8p-Del	Del_1p31.3	1	1
8p-Del	Del_3p13	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_8p21.3	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_12p13.1	1	1
8p-Del	Del_13q14.13	1	1
8p-Del	Del_16q22.3	1	1
8p-Del	Del_16q24.1	1	1
8p-Del	Del_17p13.1	1	1
8p-Del	Del_18q21.31	1	1
8p-Del	Del_18q23	1	1
8p-Del	Del_21q22.3	1	1
8q-Del	Del_8p23.2	1	1
8q-Del	Del_8p21.3	1	1
8q-Del	Del_17p13.1	1	1
8q-Del	Del_18q21.31	1	1
8q-Del	Del_18q23	1	1
Xp-Del	Xq-Del	1	1
Xp-Del	Amp_7p14.3	1	1
Xp-Del	Amp_7q22.1	1	1
Xp-Del	Amp_9q33.3	1	1
Xp-Del	Del_2q22.1	1	1
Xp-Del	Del_4q28.2	1	1
Xp-Del	Del_5q21.1	1	1
Xp-Del	Del_13q14.13	1	1
Xp-Del	Del_13q22.1	1	1
Xq-Del	Amp_7p14.3	1	1
Xq-Del	Amp_7q22.1	1	1
Xq-Del	Amp_9q33.3	1	1
Xq-Del	Del_2q22.1	1	1
Xq-Del	Del_4q28.2	1	1
Xq-Del	Del_5q21.1	1	1
Xq-Del	Del_13q14.13	1	1
Xq-Del	Del_13q22.1	1	1
Amp_1q22	Amp_3q21.3	1	1
Amp_1q22	Amp_4q13.3	1	1
Amp_1q22	Amp_8p11.23	1	1
Amp_1q22	Amp_8q24.21	1	1
Amp_1q22	Amp_9q33.3	1	1
Amp_1q22	Amp_11q13.2	1	1
Amp_1q22	Amp_13q12.11	1	1
Amp_1q22	Amp_14q21.1	1	1
Amp_1q22	Amp_17q23.2	1	1
Amp_1q22	Amp_Xp21.1	1	1
Amp_3q21.3	Amp_3q26.2	1	1
Amp_3q21.3	Amp_4q13.3	1	1
Amp_3q21.3	Amp_7p14.3	1	1
Amp_3q21.3	Amp_7q22.1	1	1
Amp_3q21.3	Amp_8p11.23	1	1
Amp_3q21.3	Amp_8q22.1	1	1
Amp_3q21.3	Amp_8q24.21	1	1
Amp_3q21.3	Amp_11q13.2	1	1
Amp_3q21.3	Amp_14q21.1	1	1
Amp_3q21.3	Amp_16q11.2	1	1
Amp_3q21.3	Amp_Xp21.1	1	1
Amp_3q21.3	Del_2q22.1	1	1
Amp_3q21.3	Del_5q11.2	1	1
Amp_3q21.3	Del_5q21.1	1	1
Amp_3q26.2	Amp_4q13.3	1	1
Amp_3q26.2	Amp_7p14.3	1	1
Amp_3q26.2	Amp_7q22.1	1	1
Amp_3q26.2	Amp_8q24.21	1	1
Amp_3q26.2	Amp_9q33.3	1	1
Amp_3q26.2	Amp_11q13.2	1	1
Amp_3q26.2	Amp_14q21.1	1	1
Amp_3q26.2	Amp_16q11.2	1	1
Amp_3q26.2	Amp_20q13.2	1	1
Amp_4q13.3	Amp_7p14.3	1	1
Amp_4q13.3	Amp_7q22.1	1	1
Amp_4q13.3	Amp_8p11.23	1	1
Amp_4q13.3	Amp_8q24.21	1	1
Amp_4q13.3	Amp_20q13.2	1	1
Amp_4q13.3	Del_13q22.1	1	1
Amp_7p14.3	Amp_7q22.1	1	1
Amp_7p14.3	Amp_8p11.23	1	1
Amp_7p14.3	Amp_8q22.1	1	1
Amp_7p14.3	Amp_8q24.21	1	1
Amp_7p14.3	Amp_9q33.3	1	1
Amp_7p14.3	Amp_11q13.2	1	1
Amp_7p14.3	Amp_13q12.11	1	1
Amp_7p14.3	Amp_20q13.2	1	1
Amp_7p14.3	Amp_Xp21.1	1	1
Amp_7p14.3	Del_2q22.1	1	1
Amp_7p14.3	Del_2q22.3	1	1
Amp_7p14.3	Del_4q28.2	1	1
Amp_7p14.3	Del_5q21.1	1	1
Amp_7p14.3	Del_6q14.3	1	1
Amp_7p14.3	Del_11p11.2	1	1
Amp_7p14.3	Del_12q24.32	1	1
Amp_7p14.3	Del_13q14.13	1	1
Amp_7p14.3	Del_13q22.1	1	1
Amp_7q22.1	Amp_8q22.1	1	1
Amp_7q22.1	Amp_8q24.21	1	1
Amp_7q22.1	Amp_9q33.3	1	1
Amp_7q22.1	Amp_11q13.2	1	1
Amp_7q22.1	Amp_13q12.11	1	1
Amp_7q22.1	Amp_20q13.2	1	1
Amp_7q22.1	Del_2q22.1	1	1
Amp_7q22.1	Del_2q22.3	1	1
Amp_7q22.1	Del_4q28.2	1	1
Amp_7q22.1	Del_5q21.1	1	1
Amp_7q22.1	Del_6q14.3	1	1
Amp_7q22.1	Del_11p11.2	1	1
Amp_7q22.1	Del_12q24.32	1	1
Amp_7q22.1	Del_13q14.13	1	1
Amp_7q22.1	Del_13q22.1	1	1
Amp_8p11.23	Amp_8q22.1	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_9q33.3	1	1
Amp_8p11.23	Amp_11q13.2	1	1
Amp_8p11.23	Amp_20q13.2	1	1
Amp_8p11.23	Del_2q22.1	1	1
Amp_8p11.23	Del_8p23.2	1	1
Amp_8p11.23	Del_8p21.3	1	1
Amp_8p11.23	Del_9p23	1	1
Amp_8q22.1	Amp_8q24.21	1	1
Amp_8q22.1	Amp_9q33.3	1	1
Amp_8q22.1	Amp_11q13.2	1	1
Amp_8q22.1	Amp_16q11.2	1	1
Amp_8q22.1	Amp_17q23.2	1	1
Amp_8q22.1	Amp_20q13.2	1	1
Amp_8q22.1	Del_2q22.1	1	1
Amp_8q22.1	Del_5q11.2	1	1
Amp_8q22.1	Del_6q14.3	1	1
Amp_8q22.1	Del_8p23.2	1	1
Amp_8q22.1	Del_8p21.3	1	1
Amp_8q22.1	Del_13q14.13	1	1
Amp_8q22.1	Del_16q22.3	1	1
Amp_8q22.1	Del_16q24.1	1	1
Amp_8q22.1	Del_17p13.1	1	1
Amp_8q24.21	Amp_9q33.3	1	1
Amp_8q24.21	Amp_11q13.2	1	1
Amp_8q24.21	Amp_12q23.1	1	1
Amp_8q24.21	Amp_14q21.1	1	1
Amp_8q24.21	Amp_16q11.2	1	1
Amp_8q24.21	Amp_17q23.2	1	1
Amp_8q24.21	Amp_20q13.2	1	1
Amp_8q24.21	Del_2q22.1	1	1
Amp_8q24.21	Del_5q11.2	1	1
Amp_8q24.21	Del_5q13.2	1	1
Amp_8q24.21	Del_6q14.3	1	1
Amp_8q24.21	Del_8p23.2	1	1
Amp_8q24.21	Del_8p21.3	1	1
Amp_8q24.21	Del_11q22.3	1	1
Amp_8q24.21	Del_13q14.13	1	1
Amp_8q24.21	Del_16q22.3	1	1
Amp_8q24.21	Del_16q24.1	1	1
Amp_9q33.3	Amp_11q13.2	1	1
Amp_9q33.3	Amp_13q12.11	1	1
Amp_9q33.3	Amp_16q11.2	1	1
Amp_9q33.3	Amp_17q23.2	1	1
Amp_9q33.3	Amp_Xp22.11	1	1
Amp_9q33.3	Amp_Xp21.1	1	1
Amp_9q33.3	Del_16q22.3	1	1
Amp_9q33.3	Del_16q24.1	1	1
Amp_9q33.3	Del_19q13.2	1	1
Amp_11q13.2	Amp_13q12.11	1	1
Amp_11q13.2	Amp_14q21.1	1	1
Amp_11q13.2	Amp_16q11.2	1	1
Amp_11q13.2	Amp_17q23.2	1	1
Amp_11q13.2	Amp_20q13.2	1	1
Amp_12q23.1	Amp_14q21.1	1	1
Amp_12q23.1	Del_11q22.3	1	1
Amp_12q23.1	Del_16q24.1	1	1
Amp_13q12.11	Amp_14q21.1	1	1
Amp_13q12.11	Amp_Xp21.1	1	1
Amp_14q21.1	Amp_Xp21.1	1	1
Amp_15q11.2	Amp_17q23.2	1	1
Amp_15q11.2	Del_15q21.3	1	1
Amp_16q11.2	Amp_17q23.2	1	1
Amp_16q11.2	Amp_20q13.2	1	1
Amp_16q11.2	Amp_Xp22.11	1	1
Amp_16q11.2	Amp_Xp21.1	1	1
Amp_16q11.2	Del_8p23.2	1	1
Amp_16q11.2	Del_8p21.3	1	1
Amp_16q11.2	Del_16q22.3	1	1
Amp_17q23.2	Amp_20q13.2	1	1
Amp_20q13.2	Del_8p21.3	1	1
Amp_Xp22.11	Amp_Xp21.1	1	1
Del_1p31.3	Del_1p22.1	1	1
Del_1p31.3	Del_6p25.1	1	1
Del_1p31.3	Del_10q23.31	1	1
Del_1p31.3	Del_13q22.1	1	1
Del_1p31.3	Del_17p13.1	1	1
Del_1p31.3	Del_19q13.2	1	1
Del_1p31.3	Del_21q22.3	1	1
Del_1p22.1	Del_2q22.3	1	1
Del_1p22.1	Del_5q21.1	1	1
Del_1p22.1	Del_6p25.1	1	1
Del_1p22.1	Del_6q14.3	1	1
Del_1p22.1	Del_12q24.32	1	1
Del_1p22.1	Del_18q21.31	1	1
Del_1p22.1	Del_18q23	1	1
Del_1q42.3	Del_6q14.3	1	1
Del_2q22.1	Del_2q22.3	1	1
Del_2q22.1	Del_4q28.2	1	1
Del_2q22.1	Del_5q13.2	1	1
Del_2q22.1	Del_5q21.1	1	1
Del_2q22.1	Del_6q14.3	1	1
Del_2q22.1	Del_11p11.2	1	1
Del_2q22.1	Del_12q24.32	1	1
Del_2q22.1	Del_13q14.13	1	1
Del_2q22.1	Del_13q22.1	1	1
Del_2q22.3	Del_4q28.2	1	1
Del_2q22.3	Del_5q11.2	1	1
Del_2q22.3	Del_5q13.2	1	1
Del_2q22.3	Del_5q21.1	1	1
Del_2q22.3	Del_6q14.3	1	1
Del_2q22.3	Del_11p11.2	1	1
Del_2q22.3	Del_13q14.13	1	1
Del_2q22.3	Del_13q22.1	1	1
Del_3p13	Del_21q22.3	1	1
Del_4q28.2	Del_5q13.2	1	1
Del_4q28.2	Del_5q21.1	1	1
Del_4q28.2	Del_6q14.3	1	1
Del_4q28.2	Del_11p11.2	1	1
Del_4q28.2	Del_13q14.13	1	1
Del_4q28.2	Del_13q22.1	1	1
Del_5q11.2	Del_5q13.2	1	1
Del_5q11.2	Del_5q21.1	1	1
Del_5q11.2	Del_6q14.3	1	1
Del_5q11.2	Del_8p23.2	1	1
Del_5q11.2	Del_8p21.3	1	1
Del_5q11.2	Del_13q14.13	1	1
Del_5q11.2	Del_13q22.1	1	1
Del_5q11.2	Del_16q24.1	1	1
Del_5q11.2	Del_18q21.31	1	1
Del_5q13.2	Del_5q21.1	1	1
Del_5q13.2	Del_6q14.3	1	1
Del_5q13.2	Del_8p21.3	1	1
Del_5q13.2	Del_11p11.2	1	1
Del_5q13.2	Del_12p13.1	1	1
Del_5q13.2	Del_16q22.3	1	1
Del_5q13.2	Del_16q24.1	1	1
Del_5q21.1	Del_6q14.3	1	1
Del_5q21.1	Del_11p11.2	1	1
Del_5q21.1	Del_13q14.13	1	1
Del_5q21.1	Del_13q22.1	1	1
Del_6p25.1	Del_6q14.3	1	1
Del_6p25.1	Del_13q14.13	1	1
Del_6p25.1	Del_13q22.1	1	1
Del_6q14.3	Del_8p23.2	1	1
Del_6q14.3	Del_8p21.3	1	1
Del_6q14.3	Del_11p11.2	1	1
Del_6q14.3	Del_12p13.1	1	1
Del_6q14.3	Del_12q24.32	1	1
Del_6q14.3	Del_13q14.13	1	1
Del_6q14.3	Del_13q22.1	1	1
Del_8p23.2	Del_8p21.3	1	1
Del_8p23.2	Del_10q23.31	1	1
Del_8p23.2	Del_12p13.1	1	1
Del_8p23.2	Del_13q14.13	1	1
Del_8p23.2	Del_15q21.3	1	1
Del_8p23.2	Del_16q22.3	1	1
Del_8p23.2	Del_16q24.1	1	1
Del_8p23.2	Del_17p13.1	1	1
Del_8p23.2	Del_18q21.31	1	1
Del_8p23.2	Del_18q23	1	1
Del_8p21.3	Del_9p23	1	1
Del_8p21.3	Del_10q23.31	1	1
Del_8p21.3	Del_12p13.1	1	1
Del_8p21.3	Del_12q24.32	1	1
Del_8p21.3	Del_13q14.13	1	1
Del_8p21.3	Del_13q22.1	1	1
Del_8p21.3	Del_15q21.3	1	1
Del_8p21.3	Del_16q22.3	1	1
Del_8p21.3	Del_16q24.1	1	1
Del_8p21.3	Del_17p13.1	1	1
Del_8p21.3	Del_17q21.31	1	1
Del_8p21.3	Del_18q21.31	1	1
Del_8p21.3	Del_18q23	1	1
Del_8p21.3	Del_21q22.3	1	1
Del_9p23	Del_12p13.1	1	1
Del_9p23	Del_15q21.3	1	1
Del_9p23	Del_18q21.31	1	1
Del_10q23.31	Del_12p13.1	1	1
Del_10q23.31	Del_13q14.13	1	1
Del_10q23.31	Del_15q21.3	1	1
Del_10q23.31	Del_17p13.1	1	1
Del_10q23.31	Del_18q21.31	1	1
Del_10q23.31	Del_18q23	1	1
Del_10q23.31	Del_21q22.3	1	1
Del_11p11.2	Del_13q14.13	1	1
Del_11p11.2	Del_13q22.1	1	1
Del_11p11.2	Del_16q22.3	1	1
Del_11p11.2	Del_16q24.1	1	1
Del_11q22.3	Del_11q23.2	1	1
Del_11q22.3	Del_16q22.3	1	1
Del_11q22.3	Del_16q24.1	1	1
Del_12p13.1	Del_13q14.13	1	1
Del_12p13.1	Del_15q21.3	1	1
Del_12p13.1	Del_16q24.1	1	1
Del_12p13.1	Del_17q21.31	1	1
Del_12p13.1	Del_21q22.3	1	1
Del_12q24.32	Del_16q22.3	1	1
Del_12q24.32	Del_16q24.1	1	1
Del_13q14.13	Del_13q22.1	1	1
Del_13q14.13	Del_16q22.3	1	1
Del_13q14.13	Del_16q24.1	1	1
Del_13q22.1	Del_21q22.3	1	1
Del_16q22.3	Del_16q24.1	1	1
Del_16q22.3	Del_17p13.1	1	1
Del_16q22.3	Del_18q21.31	1	1
Del_16q22.3	Del_18q23	1	1
Del_16q22.3	Del_21q22.3	1	1
Del_16q24.1	Del_17p13.1	1	1
Del_16q24.1	Del_18q21.31	1	1
Del_16q24.1	Del_18q23	1	1
Del_16q24.1	Del_21q22.3	1	1
Del_17p13.1	Del_18q21.31	1	1
Del_17p13.1	Del_18q23	1	1
Del_17p13.1	Del_19q13.2	1	1
Del_17p13.1	Del_21q22.2	1	1
Del_17p13.1	Del_21q22.3	1	1
Del_17q21.31	Del_21q22.3	1	1
Del_18q21.31	Del_18q23	1	1
Del_18q23	Del_19q13.2	1	1
Del_21q22.2	Del_21q22.3	1	1
SPOP	Del_21q22.3	7.52e-05	1
