
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/UCEC-TP/14529198/UCEC-TP.meth.by_max_stddev.data.txt", "-u10093", "-oUCEC-TP")
Cluster size 10093 broken into 4836 5257 
Cluster size 4836 broken into 2980 1856 
Cluster size 2980 broken into 1392 1588 
Done cluster 1392 
Cluster size 1588 broken into 898 690 
Done cluster 898 
Done cluster 690 
Done cluster 1588 
Done cluster 2980 
Cluster size 1856 broken into 974 882 
Done cluster 974 
Done cluster 882 
Done cluster 1856 
Done cluster 4836 
Cluster size 5257 broken into 5255 2 
Cluster size 5255 broken into 2979 2276 
Cluster size 2979 broken into 1228 1751 
Done cluster 1228 
Cluster size 1751 broken into 892 859 
Done cluster 892 
Done cluster 859 
Done cluster 1751 
Done cluster 2979 
Cluster size 2276 broken into 1468 808 
Done cluster 1468 
Done cluster 808 
Done cluster 2276 
Done cluster 5255 
Done cluster 2 
Done cluster 5257 
> q(save="no")
