name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-2F-A9KO-01A-11D-A38G-08	682	664	18	494	2.639296e-02	0	coding only	34834024	162	461	4.650625e-06	1.323419e-05
TCGA-2F-A9KP-01A-11D-A38G-08	173	169	4	131	2.312139e-02	0	coding only	34834024	34	124	9.760572e-07	3.559738e-06
TCGA-2F-A9KQ-01A-11D-A38G-08	90	86	4	69	4.444444e-02	1	exome+100bp flanks	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-2F-A9KR-01A-11D-A38G-08	319	314	5	234	1.567398e-02	0	coding only	34834024	78	222	2.239190e-06	6.373079e-06
TCGA-2F-A9KT-01A-11D-A38G-08	443	426	17	339	3.837472e-02	1	exome+100bp flanks	34834024	86	327	2.468851e-06	9.387374e-06
TCGA-2F-A9KW-01A-11D-A38G-08	140	135	5	95	3.571429e-02	1	exome+100bp flanks	34834024	38	93	1.090887e-06	2.669804e-06
TCGA-4Z-AA7M-01A-11D-A391-08	666	649	17	486	2.552553e-02	0	coding only	34834024	158	466	4.535795e-06	1.337773e-05
TCGA-4Z-AA7N-01A-11D-A391-08	39	36	3	24	7.692308e-02	1	exome+100bp flanks	34834024	11	23	3.157832e-07	6.602740e-07
TCGA-4Z-AA7O-01A-31D-A391-08	247	236	11	169	4.453441e-02	1	exome+100bp flanks	34834024	63	156	1.808577e-06	4.478380e-06
TCGA-4Z-AA7Q-01A-11D-A391-08	316	304	12	232	3.797468e-02	1	exome+100bp flanks	34834024	69	210	1.980822e-06	6.028589e-06
TCGA-4Z-AA7R-01A-11D-A391-08	450	436	14	325	3.111111e-02	1	exome+100bp flanks	34834024	107	307	3.071709e-06	8.813222e-06
TCGA-4Z-AA7S-01A-11D-A391-08	87	83	4	65	4.597701e-02	1	exome+100bp flanks	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-4Z-AA7W-01A-11D-A391-08	670	658	12	521	1.791045e-02	0	coding only	34834024	131	499	3.760691e-06	1.432507e-05
TCGA-4Z-AA7Y-01A-11D-A391-08	392	374	18	267	4.591837e-02	1	exome+100bp flanks	34834024	103	249	2.956879e-06	7.148184e-06
TCGA-4Z-AA80-01A-11D-A391-08	530	518	12	386	2.264151e-02	0	coding only	34834024	126	368	3.617153e-06	1.056438e-05
TCGA-4Z-AA81-01A-11D-A391-08	274	267	7	199	2.554745e-02	0	coding only	34834024	65	186	1.865992e-06	5.339607e-06
TCGA-4Z-AA82-01A-11D-A391-08	140	134	6	99	4.285714e-02	1	exome+100bp flanks	34834024	35	91	1.004765e-06	2.612388e-06
TCGA-4Z-AA83-01A-11D-A391-08	110	107	3	80	2.727273e-02	0	coding only	34834024	25	75	7.176891e-07	2.153067e-06
TCGA-4Z-AA84-01A-11D-A391-08	624	621	3	424	4.807692e-03	0	coding only	34834024	184	403	5.282192e-06	1.156915e-05
TCGA-4Z-AA86-01A-11D-A391-08	285	273	12	205	4.210526e-02	1	exome+100bp flanks	34834024	64	186	1.837284e-06	5.339607e-06
TCGA-4Z-AA87-01A-11D-A391-08	329	319	10	245	3.039514e-02	1	exome+100bp flanks	34834024	71	234	2.038237e-06	6.717570e-06
TCGA-4Z-AA89-01A-11D-A391-08	178	175	3	131	1.685393e-02	0	coding only	34834024	41	124	1.177010e-06	3.559738e-06
TCGA-5N-A9KI-01A-31D-A42E-08	212	206	6	157	2.830189e-02	0	coding only	34834024	43	146	1.234425e-06	4.191304e-06
TCGA-5N-A9KM-01A-11D-A42E-08	279	269	10	196	3.584229e-02	1	exome+100bp flanks	34834024	69	191	1.980822e-06	5.483145e-06
TCGA-BL-A0C8-01A-11D-A10S-08	193	192	1	143	5.181347e-03	0	coding only	34834024	44	137	1.263133e-06	3.932936e-06
TCGA-BL-A13I-01A-11D-A13W-08	126	120	6	94	4.761905e-02	1	exome+100bp flanks	34834024	25	90	7.176891e-07	2.583681e-06
TCGA-BL-A13J-01A-11D-A10S-08	157	148	9	109	5.732484e-02	1	exome+100bp flanks	34834024	39	103	1.119595e-06	2.956879e-06
TCGA-BL-A3JM-01A-12D-A21A-08	262	252	10	184	3.816794e-02	1	exome+100bp flanks	34834024	66	174	1.894699e-06	4.995116e-06
TCGA-BL-A5ZZ-01A-31D-A30E-08	225	215	10	153	4.444444e-02	1	exome+100bp flanks	34834024	57	148	1.636331e-06	4.248720e-06
TCGA-BT-A0S7-01A-11D-A10S-08	71	67	4	50	5.633803e-02	1	exome+100bp flanks	34834024	16	46	4.593210e-07	1.320548e-06
TCGA-BT-A0YX-01A-11D-A10S-08	798	771	27	581	3.383459e-02	1	exome+100bp flanks	34834024	176	546	5.052531e-06	1.567433e-05
TCGA-BT-A20J-01A-11D-A14W-08	597	587	10	437	1.675042e-02	0	coding only	34834024	145	409	4.162597e-06	1.174139e-05
TCGA-BT-A20N-01A-11D-A14W-08	369	360	9	266	2.439024e-02	0	coding only	34834024	85	249	2.440143e-06	7.148184e-06
TCGA-BT-A20O-01A-21D-A14W-08	248	239	9	187	3.629032e-02	1	exome+100bp flanks	34834024	51	175	1.464086e-06	5.023824e-06
TCGA-BT-A20P-01A-11D-A14W-08	110	109	1	83	9.090909e-03	0	coding only	34834024	24	76	6.889816e-07	2.181775e-06
TCGA-BT-A20Q-01A-11D-A14W-08	127	123	4	97	3.149606e-02	1	exome+100bp flanks	34834024	25	85	7.176891e-07	2.440143e-06
TCGA-BT-A20R-01A-12D-A16O-08	363	353	10	265	2.754821e-02	0	coding only	34834024	85	247	2.440143e-06	7.090768e-06
TCGA-BT-A20T-01A-11D-A14W-08	319	311	8	233	2.507837e-02	0	coding only	34834024	72	220	2.066945e-06	6.315664e-06
TCGA-BT-A20U-01A-11D-A14W-08	112	109	3	89	2.678571e-02	0	coding only	34834024	18	85	5.167362e-07	2.440143e-06
TCGA-BT-A20V-01A-11D-A14W-08	132	128	4	100	3.030303e-02	1	exome+100bp flanks	34834024	27	93	7.751042e-07	2.669804e-06
TCGA-BT-A20W-01A-21D-A14W-08	124	121	3	96	2.419355e-02	0	coding only	34834024	24	91	6.889816e-07	2.612388e-06
TCGA-BT-A20X-01A-11D-A16O-08	100	93	7	72	7.000000e-02	1	exome+100bp flanks	34834024	20	66	5.741513e-07	1.894699e-06
TCGA-BT-A2LA-01A-11D-A18F-08	219	214	5	160	2.283105e-02	0	coding only	34834024	51	152	1.464086e-06	4.363550e-06
TCGA-BT-A2LB-01A-11D-A18F-08	752	737	15	518	1.994681e-02	0	coding only	34834024	215	497	6.172126e-06	1.426766e-05
TCGA-BT-A2LD-01A-12D-A20D-08	140	135	5	101	3.571429e-02	1	exome+100bp flanks	34834024	31	96	8.899345e-07	2.755926e-06
TCGA-BT-A3PH-01A-11D-A21Z-08	564	552	12	424	2.127660e-02	0	coding only	34834024	124	403	3.559738e-06	1.156915e-05
TCGA-BT-A3PJ-01A-21D-A21Z-08	636	616	20	451	3.144654e-02	1	exome+100bp flanks	34834024	156	427	4.478380e-06	1.225813e-05
TCGA-BT-A3PK-01A-21D-A21Z-08	501	493	8	378	1.596806e-02	0	coding only	34834024	109	352	3.129125e-06	1.010506e-05
TCGA-BT-A42B-01A-32D-A23M-08	90	86	4	62	4.444444e-02	1	exome+100bp flanks	34834024	22	57	6.315664e-07	1.636331e-06
TCGA-BT-A42C-01A-11D-A23M-08	452	436	16	337	3.539823e-02	1	exome+100bp flanks	34834024	94	316	2.698511e-06	9.071590e-06
TCGA-BT-A42E-01A-11D-A23U-08	218	211	7	164	3.211009e-02	1	exome+100bp flanks	34834024	46	156	1.320548e-06	4.478380e-06
TCGA-BT-A42F-01A-11D-A23U-08	223	218	5	168	2.242152e-02	0	coding only	34834024	48	166	1.377963e-06	4.765456e-06
TCGA-C4-A0EZ-01A-21D-A10S-08	248	240	8	178	3.225806e-02	1	exome+100bp flanks	34834024	58	170	1.665039e-06	4.880286e-06
TCGA-C4-A0F0-01A-12D-A10S-08	116	112	4	85	3.448276e-02	1	exome+100bp flanks	34834024	25	84	7.176891e-07	2.411435e-06
TCGA-C4-A0F1-01A-11D-A10S-08	217	212	5	152	2.304147e-02	0	coding only	34834024	54	138	1.550208e-06	3.961644e-06
TCGA-C4-A0F6-01A-11D-A10S-08	253	248	5	189	1.976285e-02	0	coding only	34834024	57	183	1.636331e-06	5.253484e-06
TCGA-C4-A0F7-01A-11D-A10S-08	99	97	2	70	2.020202e-02	0	coding only	34834024	23	63	6.602740e-07	1.808577e-06
TCGA-CF-A1HR-01A-11D-A13W-08	397	388	9	288	2.267003e-02	0	coding only	34834024	91	269	2.612388e-06	7.722335e-06
TCGA-CF-A1HS-01A-11D-A13W-08	380	369	11	277	2.894737e-02	0	coding only	34834024	88	263	2.526266e-06	7.550090e-06
TCGA-CF-A27C-01A-11D-A16O-08	204	194	10	138	4.901961e-02	1	exome+100bp flanks	34834024	55	133	1.578916e-06	3.818106e-06
TCGA-CF-A3MF-01A-12D-A21A-08	43	38	5	29	1.162791e-01	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-CF-A3MG-01A-11D-A20D-08	184	180	4	129	2.173913e-02	0	coding only	34834024	47	122	1.349256e-06	3.502323e-06
TCGA-CF-A3MH-01A-11D-A20D-08	66	62	4	49	6.060606e-02	1	exome+100bp flanks	34834024	12	45	3.444908e-07	1.291840e-06
TCGA-CF-A3MI-01A-11D-A20D-08	102	95	7	70	6.862745e-02	1	exome+100bp flanks	34834024	23	66	6.602740e-07	1.894699e-06
TCGA-CF-A47S-01A-11D-A23U-08	38	37	1	31	2.631579e-02	1	exome+100bp flanks	34834024	6	31	1.722454e-07	8.899345e-07
TCGA-CF-A47T-01A-11D-A23U-08	48	44	4	31	8.333333e-02	1	exome+100bp flanks	34834024	13	29	3.731983e-07	8.325194e-07
TCGA-CF-A47V-01A-11D-A23U-08	96	93	3	67	3.125000e-02	1	exome+100bp flanks	34834024	25	62	7.176891e-07	1.779869e-06
TCGA-CF-A47W-01A-11D-A23U-08	37	36	1	29	2.702703e-02	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-CF-A47X-01A-31D-A23U-08	411	400	11	299	2.676399e-02	0	coding only	34834024	94	286	2.698511e-06	8.210364e-06
TCGA-CF-A47Y-01A-11D-A23U-08	88	87	1	66	1.136364e-02	0	coding only	34834024	21	61	6.028589e-07	1.751161e-06
TCGA-CF-A5U8-01A-11D-A289-08	85	83	2	58	2.352941e-02	0	coding only	34834024	24	54	6.889816e-07	1.550208e-06
TCGA-CF-A5UA-01A-11D-A289-08	110	104	6	79	5.454545e-02	1	exome+100bp flanks	34834024	23	72	6.602740e-07	2.066945e-06
TCGA-CF-A7I0-01A-22D-A34U-08	66	62	4	38	6.060606e-02	1	exome+100bp flanks	34834024	22	36	6.315664e-07	1.033472e-06
TCGA-CF-A9FF-01A-11D-A38G-08	200	197	3	150	1.500000e-02	0	coding only	34834024	44	135	1.263133e-06	3.875521e-06
TCGA-CF-A9FH-01A-11D-A38G-08	55	51	4	43	7.272727e-02	1	exome+100bp flanks	34834024	8	42	2.296605e-07	1.205718e-06
TCGA-CF-A9FL-01A-11D-A38G-08	85	78	7	61	8.235294e-02	1	exome+100bp flanks	34834024	16	54	4.593210e-07	1.550208e-06
TCGA-CF-A9FM-01A-11D-A38G-08	35	30	5	21	1.428571e-01	1	exome+100bp flanks	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-CU-A0YN-01A-21D-A10S-08	205	195	10	150	4.878049e-02	1	exome+100bp flanks	34834024	40	140	1.148303e-06	4.019059e-06
TCGA-CU-A0YO-01A-11D-A10S-08	147	139	8	109	5.442177e-02	1	exome+100bp flanks	34834024	28	103	8.038118e-07	2.956879e-06
TCGA-CU-A0YR-01A-12D-A10S-08	194	188	6	142	3.092784e-02	1	exome+100bp flanks	34834024	45	136	1.291840e-06	3.904229e-06
TCGA-CU-A3KJ-01A-11D-A21A-08	311	285	26	213	8.360129e-02	1	exome+100bp flanks	34834024	69	207	1.980822e-06	5.942466e-06
TCGA-CU-A3QU-01A-11D-A22Z-08	134	126	8	89	5.970149e-02	1	exome+100bp flanks	34834024	35	80	1.004765e-06	2.296605e-06
TCGA-CU-A3YL-01A-11D-A22Z-08	286	275	11	218	3.846154e-02	1	exome+100bp flanks	34834024	56	212	1.607624e-06	6.086004e-06
TCGA-CU-A5W6-01A-11D-A289-08	277	274	3	207	1.083032e-02	0	coding only	34834024	64	202	1.837284e-06	5.798928e-06
TCGA-CU-A72E-01A-12D-A339-08	134	130	4	93	2.985075e-02	0	coding only	34834024	37	90	1.062180e-06	2.583681e-06
TCGA-DK-A1A3-01A-11D-A13W-08	783	765	18	566	2.298851e-02	0	coding only	34834024	189	540	5.425730e-06	1.550208e-05
TCGA-DK-A1A5-01A-11D-A13W-08	337	322	15	235	4.451039e-02	1	exome+100bp flanks	34834024	86	226	2.468851e-06	6.487910e-06
TCGA-DK-A1A6-01A-11D-A13W-08	394	378	16	291	4.060914e-02	1	exome+100bp flanks	34834024	84	274	2.411435e-06	7.865873e-06
TCGA-DK-A1A7-01A-11D-A13W-08	275	267	8	214	2.909091e-02	0	coding only	34834024	53	205	1.521501e-06	5.885051e-06
TCGA-DK-A1AA-01A-11D-A13W-08	100	97	3	78	3.000000e-02	1	exome+100bp flanks	34834024	18	75	5.167362e-07	2.153067e-06
TCGA-DK-A1AB-01A-11D-A13W-08	258	247	11	181	4.263566e-02	1	exome+100bp flanks	34834024	63	170	1.808577e-06	4.880286e-06
TCGA-DK-A1AC-01A-11D-A13W-08	1883	1838	45	1301	2.389804e-02	0	coding only	34834024	509	1239	1.461215e-05	3.556867e-05
TCGA-DK-A1AD-01A-11D-A13W-08	290	282	8	212	2.758621e-02	0	coding only	34834024	66	194	1.894699e-06	5.569268e-06
TCGA-DK-A1AE-01A-11D-A13W-08	148	143	5	111	3.378378e-02	1	exome+100bp flanks	34834024	32	98	9.186421e-07	2.813341e-06
TCGA-DK-A1AF-01A-11D-A13W-08	158	154	4	123	2.531646e-02	0	coding only	34834024	31	115	8.899345e-07	3.301370e-06
TCGA-DK-A1AG-01A-11D-A13W-08	163	154	9	115	5.521472e-02	1	exome+100bp flanks	34834024	39	108	1.119595e-06	3.100417e-06
TCGA-DK-A2HX-01A-12D-A18F-08	148	142	6	111	4.054054e-02	1	exome+100bp flanks	34834024	29	105	8.325194e-07	3.014294e-06
TCGA-DK-A2I1-01A-11D-A17V-08	288	282	6	209	2.083333e-02	0	coding only	34834024	68	199	1.952114e-06	5.712805e-06
TCGA-DK-A2I2-01A-11D-A17V-08	151	148	3	109	1.986755e-02	0	coding only	34834024	38	106	1.090887e-06	3.043002e-06
TCGA-DK-A2I4-01A-11D-A21A-08	1199	1169	30	810	2.502085e-02	0	coding only	34834024	338	766	9.703157e-06	2.198999e-05
TCGA-DK-A2I6-01A-12D-A18F-08	355	346	9	246	2.535211e-02	0	coding only	34834024	97	236	2.784634e-06	6.774985e-06
TCGA-DK-A3IK-01A-32D-A21A-08	271	256	15	208	5.535055e-02	1	exome+100bp flanks	34834024	47	194	1.349256e-06	5.569268e-06
TCGA-DK-A3IL-01A-11D-A20D-08	228	220	8	179	3.508772e-02	1	exome+100bp flanks	34834024	38	172	1.090887e-06	4.937701e-06
TCGA-DK-A3IM-01A-11D-A20D-08	124	118	6	85	4.838710e-02	1	exome+100bp flanks	34834024	31	83	8.899345e-07	2.382728e-06
TCGA-DK-A3IN-01A-11D-A20D-08	494	483	11	357	2.226721e-02	0	coding only	34834024	118	334	3.387493e-06	9.588327e-06
TCGA-DK-A3IQ-01A-31D-A20D-08	251	245	6	184	2.390438e-02	0	coding only	34834024	59	178	1.693746e-06	5.109947e-06
TCGA-DK-A3IS-01A-21D-A21A-08	448	434	14	311	3.125000e-02	1	exome+100bp flanks	34834024	117	293	3.358785e-06	8.411316e-06
TCGA-DK-A3IT-01A-31D-A20D-08	504	482	22	397	4.365079e-02	1	exome+100bp flanks	34834024	79	379	2.267898e-06	1.088017e-05
TCGA-DK-A3IU-01A-11D-A20D-08	563	556	7	384	1.243339e-02	0	coding only	34834024	161	366	4.621918e-06	1.050697e-05
TCGA-DK-A3IV-01A-22D-A21A-08	118	114	4	89	3.389831e-02	1	exome+100bp flanks	34834024	24	84	6.889816e-07	2.411435e-06
TCGA-DK-A3WW-01A-22D-A23M-08	1483	1452	31	1083	2.090357e-02	0	coding only	34834024	355	1024	1.019119e-05	2.939655e-05
TCGA-DK-A3WX-01A-22D-A22Z-08	52	50	2	35	3.846154e-02	1	exome+100bp flanks	34834024	15	35	4.306135e-07	1.004765e-06
TCGA-DK-A3WY-01A-11D-A22Z-08	24	23	1	17	4.166667e-02	1	exome+100bp flanks	34834024	6	16	1.722454e-07	4.593210e-07
TCGA-DK-A3X1-01A-12D-A22Z-08	1100	1074	26	774	2.363636e-02	0	coding only	34834024	284	733	8.152948e-06	2.104264e-05
TCGA-DK-A3X2-01A-11D-A22Z-08	180	172	8	138	4.444444e-02	1	exome+100bp flanks	34834024	31	129	8.899345e-07	3.703276e-06
TCGA-DK-A6AV-01A-12D-A30E-08	166	160	6	109	3.614458e-02	1	exome+100bp flanks	34834024	50	105	1.435378e-06	3.014294e-06
TCGA-DK-A6AW-01A-11D-A30E-08	4670	4520	150	3612	3.211991e-02	1	exome+100bp flanks	34834024	850	3420	2.440143e-05	9.817987e-05
TCGA-DK-A6B0-01A-11D-A31L-08	43	41	2	33	4.651163e-02	1	exome+100bp flanks	34834024	6	29	1.722454e-07	8.325194e-07
TCGA-DK-A6B1-01A-12D-A30E-08	185	173	12	132	6.486486e-02	1	exome+100bp flanks	34834024	40	125	1.148303e-06	3.588446e-06
TCGA-DK-A6B2-01A-11D-A30E-08	258	244	14	180	5.426357e-02	1	exome+100bp flanks	34834024	60	172	1.722454e-06	4.937701e-06
TCGA-DK-A6B5-01A-11D-A31L-08	176	170	6	126	3.409091e-02	1	exome+100bp flanks	34834024	41	119	1.177010e-06	3.416200e-06
TCGA-DK-A6B6-01A-11D-A30E-08	1210	1191	19	803	1.570248e-02	0	coding only	34834024	375	763	1.076534e-05	2.190387e-05
TCGA-DK-AA6L-01A-11D-A391-08	505	495	10	379	1.980198e-02	0	coding only	34834024	112	361	3.215247e-06	1.036343e-05
TCGA-DK-AA6M-01A-11D-A391-08	92	87	5	59	5.434783e-02	1	exome+100bp flanks	34834024	28	58	8.038118e-07	1.665039e-06
TCGA-DK-AA6P-01A-11D-A391-08	262	259	3	194	1.145038e-02	0	coding only	34834024	64	181	1.837284e-06	5.196069e-06
TCGA-DK-AA6Q-01A-11D-A391-08	151	145	6	113	3.973510e-02	1	exome+100bp flanks	34834024	28	109	8.038118e-07	3.129125e-06
TCGA-DK-AA6R-01A-11D-A42E-08	428	419	9	330	2.102804e-02	0	coding only	34834024	84	312	2.411435e-06	8.956760e-06
TCGA-DK-AA6S-01A-21D-A391-08	718	706	12	529	1.671309e-02	0	coding only	34834024	169	497	4.851578e-06	1.426766e-05
TCGA-DK-AA6T-01A-11D-A391-08	106	84	22	66	2.075472e-01	1	exome+100bp flanks	34834024	18	59	5.167362e-07	1.693746e-06
TCGA-DK-AA6U-01A-11D-A391-08	568	557	11	434	1.936620e-02	0	coding only	34834024	120	415	3.444908e-06	1.191364e-05
TCGA-DK-AA6W-01A-12D-A391-08	325	316	9	237	2.769231e-02	0	coding only	34834024	73	228	2.095652e-06	6.545325e-06
TCGA-DK-AA6X-01A-12D-A42E-08	145	140	5	115	3.448276e-02	1	exome+100bp flanks	34834024	24	107	6.889816e-07	3.071709e-06
TCGA-DK-AA71-01A-31D-A391-08	824	807	17	594	2.063107e-02	0	coding only	34834024	208	567	5.971173e-06	1.627719e-05
TCGA-DK-AA74-01A-11D-A391-08	289	281	8	231	2.768166e-02	0	coding only	34834024	48	217	1.377963e-06	6.229542e-06
TCGA-DK-AA75-01A-11D-A391-08	606	587	19	421	3.135314e-02	1	exome+100bp flanks	34834024	159	396	4.564503e-06	1.136820e-05
TCGA-DK-AA76-01A-11D-A391-08	314	305	9	237	2.866242e-02	0	coding only	34834024	64	224	1.837284e-06	6.430495e-06
TCGA-DK-AA77-01A-11D-A391-08	453	442	11	325	2.428256e-02	0	coding only	34834024	111	310	3.186540e-06	8.899345e-06
TCGA-E5-A2PC-01A-11D-A202-08	295	280	15	207	5.084746e-02	1	exome+100bp flanks	34834024	72	196	2.066945e-06	5.626683e-06
TCGA-E5-A4TZ-01A-11D-A31L-08	616	600	16	446	2.597403e-02	0	coding only	34834024	147	410	4.220012e-06	1.177010e-05
TCGA-E5-A4U1-01A-11D-A31L-08	822	799	23	603	2.798054e-02	0	coding only	34834024	182	569	5.224777e-06	1.633460e-05
TCGA-E7-A3X6-01A-12D-A22Z-08	152	149	3	112	1.973684e-02	0	coding only	34834024	31	106	8.899345e-07	3.043002e-06
TCGA-E7-A3Y1-01A-11D-A22Z-08	229	220	9	167	3.930131e-02	1	exome+100bp flanks	34834024	50	157	1.435378e-06	4.507088e-06
TCGA-E7-A4IJ-01A-31D-A26M-08	431	420	11	300	2.552204e-02	0	coding only	34834024	111	281	3.186540e-06	8.066826e-06
TCGA-E7-A4XJ-01A-11D-A26M-08	57	55	2	42	3.508772e-02	1	exome+100bp flanks	34834024	13	41	3.731983e-07	1.177010e-06
TCGA-E7-A519-01A-11D-A26M-08	88	86	2	68	2.272727e-02	0	coding only	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-E7-A541-01A-11D-A26M-08	572	563	9	437	1.573427e-02	0	coding only	34834024	120	420	3.444908e-06	1.205718e-05
TCGA-E7-A5KE-01A-11D-A289-08	265	261	4	180	1.509434e-02	0	coding only	34834024	75	173	2.153067e-06	4.966409e-06
TCGA-E7-A5KF-01A-11D-A289-08	264	255	9	181	3.409091e-02	1	exome+100bp flanks	34834024	68	168	1.952114e-06	4.822871e-06
TCGA-E7-A677-01A-11D-A30E-08	300	291	9	220	3.000000e-02	1	exome+100bp flanks	34834024	68	213	1.952114e-06	6.114711e-06
TCGA-E7-A678-01A-11D-A30E-08	69	62	7	48	1.014493e-01	1	exome+100bp flanks	34834024	13	46	3.731983e-07	1.320548e-06
TCGA-E7-A6MD-01A-41D-A34U-08	556	550	6	401	1.079137e-02	0	coding only	34834024	141	384	4.047767e-06	1.102370e-05
TCGA-E7-A6ME-01A-22D-A32B-08	174	168	6	125	3.448276e-02	1	exome+100bp flanks	34834024	42	119	1.205718e-06	3.416200e-06
TCGA-E7-A6MF-01A-12D-A32B-08	61	59	2	45	3.278689e-02	1	exome+100bp flanks	34834024	14	41	4.019059e-07	1.177010e-06
TCGA-E7-A7DU-01A-11D-A32B-08	328	324	4	244	1.219512e-02	0	coding only	34834024	77	230	2.210482e-06	6.602740e-06
TCGA-E7-A7DV-01A-11D-A339-08	393	383	10	297	2.544529e-02	0	coding only	34834024	82	283	2.354020e-06	8.124241e-06
TCGA-E7-A7PW-01A-11D-A34U-08	142	138	4	96	2.816901e-02	0	coding only	34834024	40	84	1.148303e-06	2.411435e-06
TCGA-E7-A7XN-01A-11D-A34U-08	1173	1140	33	876	2.813299e-02	0	coding only	34834024	250	820	7.176891e-06	2.354020e-05
TCGA-E7-A85H-01A-11D-A34U-08	535	526	9	399	1.682243e-02	0	coding only	34834024	122	383	3.502323e-06	1.099500e-05
TCGA-E7-A97P-01A-11D-A38G-08	262	257	5	205	1.908397e-02	0	coding only	34834024	50	192	1.435378e-06	5.511852e-06
TCGA-E7-A97Q-01A-11D-A38G-08	78	78	0	64	0	0	coding only	34834024	14	62	4.019059e-07	1.779869e-06
TCGA-FD-A3B3-01A-12D-A202-08	229	223	6	165	2.620087e-02	0	coding only	34834024	56	156	1.607624e-06	4.478380e-06
TCGA-FD-A3B4-01A-12D-A202-08	94	88	6	69	6.382979e-02	1	exome+100bp flanks	34834024	18	66	5.167362e-07	1.894699e-06
TCGA-FD-A3B5-01A-11D-A20D-08	196	184	12	146	6.122449e-02	1	exome+100bp flanks	34834024	37	136	1.062180e-06	3.904229e-06
TCGA-FD-A3B6-01A-21D-A20D-08	341	333	8	258	2.346041e-02	0	coding only	34834024	74	248	2.124360e-06	7.119476e-06
TCGA-FD-A3B7-01A-31D-A20D-08	102	95	7	79	6.862745e-02	1	exome+100bp flanks	34834024	14	75	4.019059e-07	2.153067e-06
TCGA-FD-A3B8-01A-31D-A20D-08	100	98	2	76	2.000000e-02	0	coding only	34834024	22	71	6.315664e-07	2.038237e-06
TCGA-FD-A3N5-01A-11D-A21A-08	408	398	10	281	2.450980e-02	0	coding only	34834024	112	268	3.215247e-06	7.693627e-06
TCGA-FD-A3N6-01A-11D-A21A-08	169	155	14	119	8.284024e-02	1	exome+100bp flanks	34834024	33	112	9.473496e-07	3.215247e-06
TCGA-FD-A3NA-01A-11D-A21A-08	219	213	6	168	2.739726e-02	0	coding only	34834024	44	160	1.263133e-06	4.593210e-06
TCGA-FD-A3SJ-01A-12D-A22Z-08	305	298	7	221	2.295082e-02	0	coding only	34834024	73	206	2.095652e-06	5.913758e-06
TCGA-FD-A3SL-01A-21D-A22Z-08	282	275	7	213	2.482270e-02	0	coding only	34834024	62	193	1.779869e-06	5.540560e-06
TCGA-FD-A3SM-01A-11D-A22Z-08	254	248	6	193	2.362205e-02	0	coding only	34834024	52	176	1.492793e-06	5.052531e-06
TCGA-FD-A3SN-01A-12D-A22Z-08	492	476	16	344	3.252033e-02	1	exome+100bp flanks	34834024	124	323	3.559738e-06	9.272543e-06
TCGA-FD-A3SO-01A-11D-A22Z-08	442	435	7	315	1.583710e-02	0	coding only	34834024	112	295	3.215247e-06	8.468732e-06
TCGA-FD-A3SP-01A-31D-A22Z-08	161	153	8	108	4.968944e-02	1	exome+100bp flanks	34834024	44	102	1.263133e-06	2.928172e-06
TCGA-FD-A3SQ-01A-21D-A22Z-08	103	98	5	73	4.854369e-02	1	exome+100bp flanks	34834024	25	71	7.176891e-07	2.038237e-06
TCGA-FD-A3SR-01A-11D-A22Z-08	174	166	8	137	4.597701e-02	1	exome+100bp flanks	34834024	26	133	7.463967e-07	3.818106e-06
TCGA-FD-A3SS-01A-12D-A22Z-08	628	609	19	447	3.025478e-02	1	exome+100bp flanks	34834024	153	422	4.392257e-06	1.211459e-05
TCGA-FD-A43N-01A-11D-A23U-08	230	221	9	166	3.913043e-02	1	exome+100bp flanks	34834024	51	162	1.464086e-06	4.650625e-06
TCGA-FD-A43P-01A-31D-A23U-08	532	514	18	376	3.383459e-02	1	exome+100bp flanks	34834024	131	355	3.760691e-06	1.019119e-05
TCGA-FD-A43S-01A-21D-A23U-08	1	1	0	0	0	1	exome+100bp flanks	34834024	1	0	2.870756e-08	0
TCGA-FD-A43U-01A-11D-A23U-08	105	98	7	72	6.666667e-02	1	exome+100bp flanks	34834024	25	71	7.176891e-07	2.038237e-06
TCGA-FD-A43X-01A-11D-A23U-08	417	401	16	299	3.836930e-02	1	exome+100bp flanks	34834024	98	281	2.813341e-06	8.066826e-06
TCGA-FD-A5BR-01A-11D-A26M-08	119	114	5	91	4.201681e-02	1	exome+100bp flanks	34834024	22	90	6.315664e-07	2.583681e-06
TCGA-FD-A5BS-01A-21D-A26M-08	31	31	0	22	0	1	exome+100bp flanks	34834024	9	22	2.583681e-07	6.315664e-07
TCGA-FD-A5BT-01A-11D-A26M-08	139	136	3	93	2.158273e-02	0	coding only	34834024	42	88	1.205718e-06	2.526266e-06
TCGA-FD-A5BU-01A-31D-A26M-08	99	93	6	74	6.060606e-02	1	exome+100bp flanks	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-FD-A5BV-01A-11D-A26M-08	153	145	8	108	5.228758e-02	1	exome+100bp flanks	34834024	37	103	1.062180e-06	2.956879e-06
TCGA-FD-A5BX-01A-11D-A26M-08	430	424	6	320	1.395349e-02	0	coding only	34834024	92	292	2.641096e-06	8.382609e-06
TCGA-FD-A5BY-01A-31D-A289-08	69	63	6	52	8.695652e-02	1	exome+100bp flanks	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-FD-A5BZ-01A-11D-A289-08	167	162	5	116	2.994012e-02	0	coding only	34834024	45	112	1.291840e-06	3.215247e-06
TCGA-FD-A5C0-01A-11D-A289-08	157	151	6	112	3.821656e-02	1	exome+100bp flanks	34834024	36	108	1.033472e-06	3.100417e-06
TCGA-FD-A5C1-01A-11D-A289-08	199	192	7	148	3.517588e-02	1	exome+100bp flanks	34834024	37	143	1.062180e-06	4.105182e-06
TCGA-FD-A62N-01A-11D-A30E-08	124	121	3	90	2.419355e-02	0	coding only	34834024	30	85	8.612269e-07	2.440143e-06
TCGA-FD-A62O-01A-11D-A30E-08	246	233	13	171	5.284553e-02	1	exome+100bp flanks	34834024	59	167	1.693746e-06	4.794163e-06
TCGA-FD-A62P-01A-32D-A30E-08	527	518	9	399	1.707780e-02	0	coding only	34834024	112	380	3.215247e-06	1.090887e-05
TCGA-FD-A62S-01A-11D-A30E-08	109	104	5	82	4.587156e-02	1	exome+100bp flanks	34834024	21	78	6.028589e-07	2.239190e-06
TCGA-FD-A6TA-01A-12D-A339-08	325	318	7	251	2.153846e-02	0	coding only	34834024	64	235	1.837284e-06	6.746278e-06
TCGA-FD-A6TB-01A-12D-A339-08	263	257	6	196	2.281369e-02	0	coding only	34834024	56	180	1.607624e-06	5.167362e-06
TCGA-FD-A6TC-01A-21D-A339-08	1222	1198	24	888	1.963993e-02	0	coding only	34834024	295	842	8.468732e-06	2.417177e-05
TCGA-FD-A6TD-01A-51D-A339-08	175	168	7	123	4.000000e-02	1	exome+100bp flanks	34834024	43	114	1.234425e-06	3.272662e-06
TCGA-FD-A6TE-01A-12D-A339-08	294	286	8	214	2.721088e-02	0	coding only	34834024	69	204	1.980822e-06	5.856343e-06
TCGA-FD-A6TF-01A-52D-A32B-08	188	179	9	136	4.787234e-02	1	exome+100bp flanks	34834024	40	126	1.148303e-06	3.617153e-06
TCGA-FD-A6TG-01A-11D-A32B-08	517	508	9	386	1.740812e-02	0	coding only	34834024	116	370	3.330078e-06	1.062180e-05
TCGA-FD-A6TH-01A-11D-A32B-08	204	198	6	153	2.941176e-02	0	coding only	34834024	42	141	1.205718e-06	4.047767e-06
TCGA-FD-A6TI-01A-11D-A32B-08	157	148	9	123	5.732484e-02	1	exome+100bp flanks	34834024	25	118	7.176891e-07	3.387493e-06
TCGA-FD-A6TK-01A-42D-A339-08	161	152	9	120	5.590062e-02	1	exome+100bp flanks	34834024	32	115	9.186421e-07	3.301370e-06
TCGA-FJ-A3Z7-01A-12D-A23M-08	408	393	15	300	3.676471e-02	1	exome+100bp flanks	34834024	84	279	2.411435e-06	8.009411e-06
TCGA-FJ-A3Z9-01A-11D-A26M-08	143	134	9	102	6.293706e-02	1	exome+100bp flanks	34834024	30	92	8.612269e-07	2.641096e-06
TCGA-FJ-A3ZE-01A-11D-A23M-08	507	488	19	370	3.747535e-02	1	exome+100bp flanks	34834024	109	355	3.129125e-06	1.019119e-05
TCGA-FJ-A3ZF-01A-11D-A23M-08	337	313	24	241	7.121662e-02	1	exome+100bp flanks	34834024	69	232	1.980822e-06	6.660155e-06
TCGA-FJ-A871-01A-11D-A34U-08	71	68	3	54	4.225352e-02	1	exome+100bp flanks	34834024	14	51	4.019059e-07	1.464086e-06
TCGA-FT-A3EE-01A-11D-A202-08	159	151	8	120	5.031447e-02	1	exome+100bp flanks	34834024	28	115	8.038118e-07	3.301370e-06
TCGA-FT-A61P-01A-11D-A30E-08	209	205	4	150	1.913876e-02	0	coding only	34834024	52	143	1.492793e-06	4.105182e-06
TCGA-G2-A2EC-01A-11D-A17V-08	229	220	9	167	3.930131e-02	1	exome+100bp flanks	34834024	52	161	1.492793e-06	4.621918e-06
TCGA-G2-A2EF-01A-12D-A18F-08	333	327	6	248	1.801802e-02	0	coding only	34834024	77	236	2.210482e-06	6.774985e-06
TCGA-G2-A2EJ-01A-11D-A17V-08	387	375	12	288	3.100775e-02	1	exome+100bp flanks	34834024	84	274	2.411435e-06	7.865873e-06
TCGA-G2-A2EK-01A-22D-A18F-08	94	88	6	68	6.382979e-02	1	exome+100bp flanks	34834024	20	64	5.741513e-07	1.837284e-06
TCGA-G2-A2EL-01A-12D-A18F-08	295	287	8	210	2.711864e-02	0	coding only	34834024	77	197	2.210482e-06	5.655390e-06
TCGA-G2-A2EO-01A-11D-A17V-08	1073	1039	34	772	3.168686e-02	1	exome+100bp flanks	34834024	252	734	7.234306e-06	2.107135e-05
TCGA-G2-A2ES-01A-11D-A17V-08	536	526	10	391	1.865672e-02	0	coding only	34834024	124	369	3.559738e-06	1.059309e-05
TCGA-G2-A3IB-01A-11D-A20D-08	133	123	10	99	7.518797e-02	1	exome+100bp flanks	34834024	23	93	6.602740e-07	2.669804e-06
TCGA-G2-A3IE-01A-11D-A20D-08	483	467	16	349	3.312629e-02	1	exome+100bp flanks	34834024	112	328	3.215247e-06	9.416081e-06
TCGA-G2-A3VY-01A-11D-A22Z-08	904	880	24	676	2.654867e-02	0	coding only	34834024	191	633	5.483145e-06	1.817189e-05
TCGA-G2-AA3B-01A-11D-A391-08	934	913	21	692	2.248394e-02	0	coding only	34834024	214	662	6.143419e-06	1.900441e-05
TCGA-G2-AA3C-01A-21D-A391-08	307	300	7	223	2.280130e-02	0	coding only	34834024	75	216	2.153067e-06	6.200834e-06
TCGA-G2-AA3D-01A-11D-A391-08	402	397	5	311	1.243781e-02	0	coding only	34834024	83	300	2.382728e-06	8.612269e-06
TCGA-G2-AA3F-01A-12D-A42E-08	175	169	6	133	3.428571e-02	1	exome+100bp flanks	34834024	35	125	1.004765e-06	3.588446e-06
TCGA-GC-A3BM-01A-11D-A22Z-08	174	163	11	116	6.321839e-02	1	exome+100bp flanks	34834024	46	108	1.320548e-06	3.100417e-06
TCGA-GC-A3I6-01A-11D-A20D-08	245	233	12	170	4.897959e-02	1	exome+100bp flanks	34834024	61	159	1.751161e-06	4.564503e-06
TCGA-GC-A3OO-01A-11D-A22Z-08	181	174	7	123	3.867403e-02	1	exome+100bp flanks	34834024	46	116	1.320548e-06	3.330078e-06
TCGA-GC-A3RB-01A-12D-A21Z-08	220	207	13	147	5.909091e-02	1	exome+100bp flanks	34834024	56	136	1.607624e-06	3.904229e-06
TCGA-GC-A3RC-01A-11D-A22Z-08	470	456	14	317	2.978723e-02	0	coding only	34834024	135	310	3.875521e-06	8.899345e-06
TCGA-GC-A3RD-01A-12D-A22Z-08	118	113	5	80	4.237288e-02	1	exome+100bp flanks	34834024	32	77	9.186421e-07	2.210482e-06
TCGA-GC-A3WC-01A-31D-A22Z-08	200	190	10	146	5.000000e-02	1	exome+100bp flanks	34834024	42	131	1.205718e-06	3.760691e-06
TCGA-GC-A3YS-01A-11D-A23M-08	305	295	10	219	3.278689e-02	1	exome+100bp flanks	34834024	72	214	2.066945e-06	6.143419e-06
TCGA-GC-A6I1-01A-12D-A31L-08	298	294	4	210	1.342282e-02	0	coding only	34834024	83	195	2.382728e-06	5.597975e-06
TCGA-GC-A6I3-01A-11D-A31L-08	304	290	14	216	4.605263e-02	1	exome+100bp flanks	34834024	68	203	1.952114e-06	5.827636e-06
TCGA-GD-A2C5-01A-12D-A17V-08	353	346	7	254	1.983003e-02	0	coding only	34834024	87	246	2.497558e-06	7.062061e-06
TCGA-GD-A3OP-01A-21D-A21Z-08	542	525	17	389	3.136531e-02	1	exome+100bp flanks	34834024	130	365	3.731983e-06	1.047826e-05
TCGA-GD-A3OQ-01A-32D-A21Z-08	142	136	6	114	4.225352e-02	1	exome+100bp flanks	34834024	21	107	6.028589e-07	3.071709e-06
TCGA-GD-A3OS-01A-12D-A21Z-08	120	115	5	88	4.166667e-02	1	exome+100bp flanks	34834024	25	87	7.176891e-07	2.497558e-06
TCGA-GD-A6C6-01A-21D-A31L-08	345	334	11	238	3.188406e-02	1	exome+100bp flanks	34834024	90	221	2.583681e-06	6.344372e-06
TCGA-GD-A76B-01A-11D-A32B-08	251	246	5	192	1.992032e-02	0	coding only	34834024	49	176	1.406671e-06	5.052531e-06
TCGA-GU-A42P-01A-11D-A23U-08	338	328	10	217	2.958580e-02	0	coding only	34834024	107	202	3.071709e-06	5.798928e-06
TCGA-GU-A42Q-01A-11D-A23U-08	229	222	7	167	3.056769e-02	1	exome+100bp flanks	34834024	53	160	1.521501e-06	4.593210e-06
TCGA-GU-A42R-01A-11D-A23M-08	211	204	7	138	3.317536e-02	1	exome+100bp flanks	34834024	64	130	1.837284e-06	3.731983e-06
TCGA-GU-A762-01A-11D-A339-08	132	125	7	93	5.303030e-02	1	exome+100bp flanks	34834024	32	87	9.186421e-07	2.497558e-06
TCGA-GU-A763-01A-11D-A32B-08	89	85	4	63	4.494382e-02	1	exome+100bp flanks	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-GU-A764-01A-11D-A34U-08	180	172	8	129	4.444444e-02	1	exome+100bp flanks	34834024	41	117	1.177010e-06	3.358785e-06
TCGA-GU-A766-01A-11D-A32B-08	236	233	3	175	1.271186e-02	0	coding only	34834024	56	169	1.607624e-06	4.851578e-06
TCGA-GU-A767-01A-11D-A32B-08	552	541	11	414	1.992754e-02	0	coding only	34834024	117	391	3.358785e-06	1.122466e-05
TCGA-GU-AATO-01A-11D-A391-08	401	394	7	299	1.745636e-02	0	coding only	34834024	91	280	2.612388e-06	8.038118e-06
TCGA-GU-AATP-01A-11D-A391-08	418	406	12	308	2.870813e-02	0	coding only	34834024	92	293	2.641096e-06	8.411316e-06
TCGA-GU-AATQ-01A-11D-A391-08	217	210	7	154	3.225806e-02	1	exome+100bp flanks	34834024	54	152	1.550208e-06	4.363550e-06
TCGA-GV-A3JV-01A-11D-A21Z-08	165	154	11	118	6.666667e-02	1	exome+100bp flanks	34834024	35	108	1.004765e-06	3.100417e-06
TCGA-GV-A3JW-01A-11D-A20D-08	102	98	4	71	3.921569e-02	1	exome+100bp flanks	34834024	27	69	7.751042e-07	1.980822e-06
TCGA-GV-A3JX-01A-11D-A20D-08	383	375	8	295	2.088773e-02	0	coding only	34834024	75	275	2.153067e-06	7.894580e-06
TCGA-GV-A3JZ-01A-11D-A21A-08	578	565	13	432	2.249135e-02	0	coding only	34834024	126	416	3.617153e-06	1.194235e-05
TCGA-GV-A3QF-01A-31D-A22Z-08	175	171	4	126	2.285714e-02	0	coding only	34834024	43	119	1.234425e-06	3.416200e-06
TCGA-GV-A3QG-01A-11D-A21Z-08	114	110	4	88	3.508772e-02	1	exome+100bp flanks	34834024	20	80	5.741513e-07	2.296605e-06
TCGA-GV-A3QH-01A-11D-A21Z-08	235	227	8	171	3.404255e-02	1	exome+100bp flanks	34834024	53	164	1.521501e-06	4.708041e-06
TCGA-GV-A3QI-01A-11D-A21Z-08	597	583	14	430	2.345059e-02	0	coding only	34834024	145	403	4.162597e-06	1.156915e-05
TCGA-GV-A3QK-01B-11D-A23M-08	188	180	8	131	4.255319e-02	1	exome+100bp flanks	34834024	47	126	1.349256e-06	3.617153e-06
TCGA-GV-A40E-01A-12D-A23M-08	204	198	6	150	2.941176e-02	0	coding only	34834024	48	142	1.377963e-06	4.076474e-06
TCGA-GV-A40G-01A-11D-A23M-08	225	217	8	163	3.555556e-02	1	exome+100bp flanks	34834024	51	155	1.464086e-06	4.449673e-06
TCGA-GV-A6ZA-01A-12D-A339-08	396	384	12	296	3.030303e-02	1	exome+100bp flanks	34834024	80	283	2.296605e-06	8.124241e-06
TCGA-H4-A2HO-01A-11D-A17V-08	119	117	2	85	1.680672e-02	0	coding only	34834024	32	81	9.186421e-07	2.325313e-06
TCGA-H4-A2HQ-01A-11D-A17V-08	584	565	19	423	3.253425e-02	1	exome+100bp flanks	34834024	133	400	3.818106e-06	1.148303e-05
TCGA-HQ-A2OE-01A-11D-A202-08	192	187	5	145	2.604167e-02	0	coding only	34834024	40	138	1.148303e-06	3.961644e-06
TCGA-HQ-A2OF-01A-11D-A26M-08	157	146	11	103	7.006369e-02	1	exome+100bp flanks	34834024	41	98	1.177010e-06	2.813341e-06
TCGA-HQ-A5ND-01A-11D-A26M-08	114	109	5	78	4.385965e-02	1	exome+100bp flanks	34834024	30	73	8.612269e-07	2.095652e-06
TCGA-HQ-A5NE-01A-12D-A289-08	443	433	10	319	2.257336e-02	0	coding only	34834024	109	306	3.129125e-06	8.784515e-06
TCGA-K4-A3WS-01A-11D-A22Z-08	347	342	5	273	1.440922e-02	0	coding only	34834024	61	254	1.751161e-06	7.291721e-06
TCGA-K4-A3WU-01B-11D-A23M-08	275	266	9	203	3.272727e-02	1	exome+100bp flanks	34834024	61	194	1.751161e-06	5.569268e-06
TCGA-K4-A3WV-01A-11D-A22Z-08	91	84	7	62	7.692308e-02	1	exome+100bp flanks	34834024	22	59	6.315664e-07	1.693746e-06
TCGA-K4-A4AB-01B-12D-A289-08	123	118	5	85	4.065041e-02	1	exome+100bp flanks	34834024	33	78	9.473496e-07	2.239190e-06
TCGA-K4-A4AC-01A-21D-A26M-08	184	181	3	133	1.630435e-02	0	coding only	34834024	47	125	1.349256e-06	3.588446e-06
TCGA-K4-A54R-01A-11D-A26M-08	1152	1125	27	839	2.343750e-02	0	coding only	34834024	272	796	7.808458e-06	2.285122e-05
TCGA-K4-A5RH-01A-11D-A30E-08	245	235	10	178	4.081633e-02	1	exome+100bp flanks	34834024	51	164	1.464086e-06	4.708041e-06
TCGA-K4-A5RI-01A-11D-A289-08	182	175	7	128	3.846154e-02	1	exome+100bp flanks	34834024	41	121	1.177010e-06	3.473615e-06
TCGA-K4-A5RJ-01A-11D-A289-08	445	424	21	313	4.719101e-02	1	exome+100bp flanks	34834024	105	299	3.014294e-06	8.583562e-06
TCGA-K4-A6FZ-01A-11D-A31L-08	472	464	8	361	1.694915e-02	0	coding only	34834024	99	349	2.842049e-06	1.001894e-05
TCGA-K4-A6MB-01A-11D-A31L-08	436	422	14	304	3.211009e-02	1	exome+100bp flanks	34834024	109	289	3.129125e-06	8.296486e-06
TCGA-K4-A83P-01A-11D-A34U-08	453	432	21	329	4.635762e-02	1	exome+100bp flanks	34834024	94	316	2.698511e-06	9.071590e-06
TCGA-K4-AAQO-01A-11D-A38G-08	321	311	10	239	3.115265e-02	1	exome+100bp flanks	34834024	65	227	1.865992e-06	6.516617e-06
TCGA-KQ-A41N-01A-11D-A339-08	312	302	10	239	3.205128e-02	1	exome+100bp flanks	34834024	63	217	1.808577e-06	6.229542e-06
TCGA-KQ-A41O-01A-12D-A34U-08	305	299	6	219	1.967213e-02	0	coding only	34834024	76	207	2.181775e-06	5.942466e-06
TCGA-KQ-A41P-01A-12D-A339-08	399	391	8	285	2.005013e-02	0	coding only	34834024	102	273	2.928172e-06	7.837165e-06
TCGA-KQ-A41Q-01A-11D-A339-08	196	186	10	137	5.102041e-02	1	exome+100bp flanks	34834024	48	134	1.377963e-06	3.846814e-06
TCGA-KQ-A41R-01A-21D-A34U-08	984	961	23	689	2.337398e-02	0	coding only	34834024	267	647	7.664920e-06	1.857379e-05
TCGA-KQ-A41S-01A-12D-A339-08	321	310	11	238	3.426791e-02	1	exome+100bp flanks	34834024	71	230	2.038237e-06	6.602740e-06
TCGA-LC-A66R-01A-41D-A30E-08	173	167	6	124	3.468208e-02	1	exome+100bp flanks	34834024	42	117	1.205718e-06	3.358785e-06
TCGA-LT-A5Z6-01A-11D-A289-08	667	645	22	467	3.298351e-02	1	exome+100bp flanks	34834024	169	441	4.851578e-06	1.266004e-05
TCGA-MV-A51V-01A-11D-A26M-08	2350	2307	43	1812	1.829787e-02	0	coding only	34834024	466	1693	1.337773e-05	4.860191e-05
TCGA-PQ-A6FI-01A-11D-A31L-08	202	192	10	150	4.950495e-02	1	exome+100bp flanks	34834024	39	141	1.119595e-06	4.047767e-06
TCGA-PQ-A6FN-01A-11D-A31L-08	103	101	2	78	1.941748e-02	0	coding only	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-R3-A69X-01A-22D-A30E-08	278	271	7	203	2.517986e-02	0	coding only	34834024	63	197	1.808577e-06	5.655390e-06
TCGA-S5-A6DX-01A-11D-A31L-08	831	809	22	599	2.647413e-02	0	coding only	34834024	201	565	5.770221e-06	1.621977e-05
TCGA-S5-AA26-01A-11D-A38G-08	284	277	7	220	2.464789e-02	0	coding only	34834024	51	209	1.464086e-06	5.999881e-06
TCGA-SY-A9G0-01A-12D-A38G-08	70	67	3	50	4.285714e-02	1	exome+100bp flanks	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-SY-A9G5-01A-11D-A38G-08	1241	1210	31	927	2.497985e-02	0	coding only	34834024	272	878	7.808458e-06	2.520524e-05
TCGA-UY-A78K-01A-11D-A339-08	1132	1105	27	856	2.385159e-02	0	coding only	34834024	239	814	6.861108e-06	2.336796e-05
TCGA-UY-A78L-01A-12D-A339-08	270	261	9	187	3.333333e-02	1	exome+100bp flanks	34834024	70	178	2.009530e-06	5.109947e-06
TCGA-UY-A78M-01A-21D-A34U-08	202	196	6	151	2.970297e-02	0	coding only	34834024	44	141	1.263133e-06	4.047767e-06
TCGA-UY-A78N-01A-12D-A339-08	294	289	5	218	1.700680e-02	0	coding only	34834024	66	206	1.894699e-06	5.913758e-06
TCGA-UY-A78O-01A-12D-A339-08	245	241	4	187	1.632653e-02	0	coding only	34834024	52	175	1.492793e-06	5.023824e-06
TCGA-UY-A8OB-01A-12D-A42E-08	399	389	10	318	2.506266e-02	0	coding only	34834024	67	305	1.923407e-06	8.755807e-06
TCGA-UY-A9PA-01A-11D-A38G-08	253	244	9	186	3.557312e-02	1	exome+100bp flanks	34834024	53	182	1.521501e-06	5.224777e-06
TCGA-UY-A9PB-01A-11D-A38G-08	742	723	19	521	2.560647e-02	0	coding only	34834024	196	485	5.626683e-06	1.392317e-05
TCGA-UY-A9PD-01A-11D-A38G-08	368	357	11	271	2.989130e-02	0	coding only	34834024	83	247	2.382728e-06	7.090768e-06
TCGA-UY-A9PE-01A-11D-A38G-08	276	269	7	211	2.536232e-02	0	coding only	34834024	54	203	1.550208e-06	5.827636e-06
TCGA-UY-A9PF-01A-11D-A38G-08	597	584	13	424	2.177554e-02	0	coding only	34834024	151	405	4.334842e-06	1.162656e-05
TCGA-UY-A9PH-01A-11D-A38G-08	474	461	13	328	2.742616e-02	0	coding only	34834024	124	298	3.559738e-06	8.554854e-06
TCGA-XF-A8HH-01A-11D-A38G-08	145	139	6	88	4.137931e-02	1	exome+100bp flanks	34834024	49	83	1.406671e-06	2.382728e-06
TCGA-XF-A8HI-01A-11D-A38G-08	108	103	5	69	4.629630e-02	1	exome+100bp flanks	34834024	33	62	9.473496e-07	1.779869e-06
TCGA-XF-A9SG-01A-12D-A42E-08	252	244	8	183	3.174603e-02	1	exome+100bp flanks	34834024	59	176	1.693746e-06	5.052531e-06
TCGA-XF-A9SH-01A-11D-A391-08	66	65	1	45	1.515152e-02	0	coding only	34834024	20	44	5.741513e-07	1.263133e-06
TCGA-XF-A9SI-01A-11D-A391-08	514	501	13	372	2.529183e-02	0	coding only	34834024	125	360	3.588446e-06	1.033472e-05
TCGA-XF-A9SJ-01A-11D-A391-08	388	377	11	271	2.835052e-02	0	coding only	34834024	101	252	2.899464e-06	7.234306e-06
TCGA-XF-A9SK-01A-11D-A42E-08	186	179	7	139	3.763441e-02	1	exome+100bp flanks	34834024	39	131	1.119595e-06	3.760691e-06
TCGA-XF-A9SL-01A-11D-A391-08	142	133	9	110	6.338028e-02	1	exome+100bp flanks	34834024	23	104	6.602740e-07	2.985587e-06
TCGA-XF-A9SM-01A-11D-A42E-08	311	306	5	227	1.607717e-02	0	coding only	34834024	75	215	2.153067e-06	6.172126e-06
TCGA-XF-A9SP-01A-11D-A391-08	406	400	6	293	1.477833e-02	0	coding only	34834024	102	275	2.928172e-06	7.894580e-06
TCGA-XF-A9ST-01A-11D-A42E-08	704	690	14	539	1.988636e-02	0	coding only	34834024	146	518	4.191304e-06	1.487052e-05
TCGA-XF-A9SU-01A-31D-A391-08	82	77	5	64	6.097561e-02	1	exome+100bp flanks	34834024	12	61	3.444908e-07	1.751161e-06
TCGA-XF-A9SV-01A-21D-A42E-08	99	90	9	64	9.090909e-02	1	exome+100bp flanks	34834024	26	62	7.463967e-07	1.779869e-06
TCGA-XF-A9SW-01A-11D-A42E-08	77	72	5	48	6.493506e-02	1	exome+100bp flanks	34834024	23	45	6.602740e-07	1.291840e-06
TCGA-XF-A9SX-01A-21D-A391-08	159	150	9	119	5.660377e-02	1	exome+100bp flanks	34834024	29	114	8.325194e-07	3.272662e-06
TCGA-XF-A9SY-01A-21D-A42E-08	572	561	11	422	1.923077e-02	0	coding only	34834024	127	400	3.645861e-06	1.148303e-05
TCGA-XF-A9SZ-01A-11D-A391-08	276	273	3	217	1.086957e-02	0	coding only	34834024	56	209	1.607624e-06	5.999881e-06
TCGA-XF-A9T0-01A-11D-A391-08	1004	978	26	698	2.589641e-02	0	coding only	34834024	268	669	7.693627e-06	1.920536e-05
TCGA-XF-A9T2-01A-11D-A42E-08	120	113	7	83	5.833333e-02	1	exome+100bp flanks	34834024	30	80	8.612269e-07	2.296605e-06
TCGA-XF-A9T3-01A-11D-A42E-08	518	506	12	362	2.316602e-02	0	coding only	34834024	132	348	3.789399e-06	9.990233e-06
TCGA-XF-A9T4-01A-11D-A391-08	48	46	2	37	4.166667e-02	1	exome+100bp flanks	34834024	8	33	2.296605e-07	9.473496e-07
TCGA-XF-A9T5-01A-11D-A42E-08	857	834	23	631	2.683781e-02	0	coding only	34834024	194	591	5.569268e-06	1.696617e-05
TCGA-XF-A9T6-01A-11D-A42E-08	398	386	12	299	3.015075e-02	1	exome+100bp flanks	34834024	84	280	2.411435e-06	8.038118e-06
TCGA-XF-A9T8-01A-11D-A391-08	903	882	21	658	2.325581e-02	0	coding only	34834024	212	608	6.086004e-06	1.745420e-05
TCGA-XF-AAME-01A-12D-A42E-08	34	31	3	26	8.823529e-02	1	exome+100bp flanks	34834024	5	26	1.435378e-07	7.463967e-07
TCGA-XF-AAMF-01A-21D-A42E-08	102	100	2	77	1.960784e-02	0	coding only	34834024	21	72	6.028589e-07	2.066945e-06
TCGA-XF-AAMG-01A-11D-A42E-08	1215	1190	25	900	2.057613e-02	0	coding only	34834024	278	844	7.980703e-06	2.422918e-05
TCGA-XF-AAMH-01A-11D-A42E-08	84	82	2	60	2.380952e-02	0	coding only	34834024	20	57	5.741513e-07	1.636331e-06
TCGA-XF-AAMJ-01A-11D-A42E-08	55	55	0	41	0	0	coding only	34834024	14	37	4.019059e-07	1.062180e-06
TCGA-XF-AAML-01A-11D-A42E-08	617	605	12	452	1.944895e-02	0	coding only	34834024	148	427	4.248720e-06	1.225813e-05
TCGA-XF-AAMQ-01A-11D-A42E-08	262	252	10	175	3.816794e-02	1	exome+100bp flanks	34834024	74	172	2.124360e-06	4.937701e-06
TCGA-XF-AAMR-01A-31D-A42E-08	127	123	4	91	3.149606e-02	1	exome+100bp flanks	34834024	31	87	8.899345e-07	2.497558e-06
TCGA-XF-AAMT-01A-11D-A42E-08	141	133	8	102	5.673759e-02	1	exome+100bp flanks	34834024	30	94	8.612269e-07	2.698511e-06
TCGA-XF-AAMW-01A-11D-A42E-08	45	41	4	30	8.888889e-02	1	exome+100bp flanks	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-XF-AAMX-01A-11D-A42E-08	416	400	16	300	3.846154e-02	1	exome+100bp flanks	34834024	92	279	2.641096e-06	8.009411e-06
TCGA-XF-AAMY-01A-11D-A42E-08	158	149	9	114	5.696203e-02	1	exome+100bp flanks	34834024	33	111	9.473496e-07	3.186540e-06
TCGA-XF-AAMZ-01A-11D-A42E-08	355	349	6	280	1.690141e-02	0	coding only	34834024	64	275	1.837284e-06	7.894580e-06
TCGA-XF-AAN0-01A-11D-A42E-08	525	513	12	398	2.285714e-02	0	coding only	34834024	105	376	3.014294e-06	1.079404e-05
TCGA-XF-AAN1-01A-31D-A42E-08	114	111	3	77	2.631579e-02	0	coding only	34834024	34	75	9.760572e-07	2.153067e-06
TCGA-XF-AAN2-01A-11D-A42E-08	583	556	27	411	4.631218e-02	1	exome+100bp flanks	34834024	135	385	3.875521e-06	1.105241e-05
TCGA-XF-AAN3-01A-11D-A42E-08	216	206	10	144	4.629630e-02	1	exome+100bp flanks	34834024	59	135	1.693746e-06	3.875521e-06
TCGA-XF-AAN4-01A-11D-A42E-08	85	81	4	66	4.705882e-02	1	exome+100bp flanks	34834024	15	63	4.306135e-07	1.808577e-06
TCGA-XF-AAN5-01A-11D-A42E-08	401	388	13	303	3.241895e-02	1	exome+100bp flanks	34834024	80	290	2.296605e-06	8.325194e-06
TCGA-XF-AAN7-01A-11D-A42E-08	187	180	7	135	3.743316e-02	1	exome+100bp flanks	34834024	43	133	1.234425e-06	3.818106e-06
TCGA-XF-AAN8-01A-11D-A42E-08	6	5	1	4	1.666667e-01	1	exome+100bp flanks	34834024	1	4	2.870756e-08	1.148303e-07
TCGA-YC-A8S6-01A-31D-A38G-08	138	130	8	104	5.797101e-02	1	exome+100bp flanks	34834024	25	99	7.176891e-07	2.842049e-06
TCGA-YC-A9TC-01A-22D-A391-08	157	148	9	114	5.732484e-02	1	exome+100bp flanks	34834024	33	106	9.473496e-07	3.043002e-06
TCGA-YF-AA3L-01A-11D-A38G-08	394	370	24	288	6.091371e-02	1	exome+100bp flanks	34834024	80	279	2.296605e-06	8.009411e-06
TCGA-YF-AA3M-01A-11D-A42E-08	224	215	9	141	4.017857e-02	1	exome+100bp flanks	34834024	72	133	2.066945e-06	3.818106e-06
TCGA-ZF-A9R0-01A-11D-A38G-08	256	248	8	180	3.125000e-02	1	exome+100bp flanks	34834024	67	173	1.923407e-06	4.966409e-06
TCGA-ZF-A9R1-01A-11D-A391-08	129	122	7	93	5.426357e-02	1	exome+100bp flanks	34834024	27	91	7.751042e-07	2.612388e-06
TCGA-ZF-A9R2-01A-11D-A391-08	194	188	6	141	3.092784e-02	1	exome+100bp flanks	34834024	44	134	1.263133e-06	3.846814e-06
TCGA-ZF-A9R3-01A-11D-A38G-08	125	113	12	86	9.600000e-02	1	exome+100bp flanks	34834024	25	81	7.176891e-07	2.325313e-06
TCGA-ZF-A9R4-01A-11D-A38G-08	314	301	13	232	4.140127e-02	1	exome+100bp flanks	34834024	67	216	1.923407e-06	6.200834e-06
TCGA-ZF-A9R5-01A-12D-A42E-08	131	127	4	102	3.053435e-02	1	exome+100bp flanks	34834024	24	94	6.889816e-07	2.698511e-06
TCGA-ZF-A9R7-01A-11D-A38G-08	862	840	22	643	2.552204e-02	0	coding only	34834024	186	602	5.339607e-06	1.728195e-05
TCGA-ZF-A9R9-01A-11D-A38G-08	259	248	11	189	4.247104e-02	1	exome+100bp flanks	34834024	56	176	1.607624e-06	5.052531e-06
TCGA-ZF-A9RC-01A-11D-A38G-08	1256	1238	18	880	1.433121e-02	0	coding only	34834024	335	828	9.617034e-06	2.376986e-05
TCGA-ZF-A9RD-01A-11D-A42E-08	229	223	6	158	2.620087e-02	0	coding only	34834024	63	151	1.808577e-06	4.334842e-06
TCGA-ZF-A9RE-01A-11D-A38G-08	99	95	4	76	4.040404e-02	1	exome+100bp flanks	34834024	17	71	4.880286e-07	2.038237e-06
TCGA-ZF-A9RF-01A-11D-A38G-08	315	304	11	239	3.492063e-02	1	exome+100bp flanks	34834024	63	230	1.808577e-06	6.602740e-06
TCGA-ZF-A9RG-01A-21D-A42E-08	304	298	6	215	1.973684e-02	0	coding only	34834024	80	207	2.296605e-06	5.942466e-06
TCGA-ZF-A9RL-01A-11D-A38G-08	436	417	19	331	4.357798e-02	1	exome+100bp flanks	34834024	85	319	2.440143e-06	9.157713e-06
TCGA-ZF-A9RM-01A-11D-A38G-08	119	115	4	92	3.361345e-02	1	exome+100bp flanks	34834024	21	91	6.028589e-07	2.612388e-06
TCGA-ZF-A9RN-01A-11D-A42E-08	251	242	9	176	3.585657e-02	1	exome+100bp flanks	34834024	64	166	1.837284e-06	4.765456e-06
TCGA-ZF-AA4N-01A-11D-A38G-08	205	199	6	156	2.926829e-02	0	coding only	34834024	42	148	1.205718e-06	4.248720e-06
TCGA-ZF-AA4R-01A-11D-A38G-08	95	93	2	75	2.105263e-02	0	coding only	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-ZF-AA4T-01A-11D-A38G-08	130	126	4	96	3.076923e-02	1	exome+100bp flanks	34834024	28	91	8.038118e-07	2.612388e-06
TCGA-ZF-AA4U-01A-11D-A38G-08	83	81	2	58	2.409639e-02	0	coding only	34834024	23	58	6.602740e-07	1.665039e-06
TCGA-ZF-AA4V-01A-11D-A38G-08	861	839	22	601	2.555168e-02	0	coding only	34834024	219	567	6.286957e-06	1.627719e-05
TCGA-ZF-AA4W-01A-12D-A38G-08	704	680	24	526	3.409091e-02	1	exome+100bp flanks	34834024	147	498	4.220012e-06	1.429637e-05
TCGA-ZF-AA4X-01A-11D-A38G-08	834	822	12	611	1.438849e-02	0	coding only	34834024	201	580	5.770221e-06	1.665039e-05
TCGA-ZF-AA51-01A-21D-A391-08	863	836	27	636	3.128621e-02	1	exome+100bp flanks	34834024	187	597	5.368315e-06	1.713842e-05
TCGA-ZF-AA52-01A-12D-A391-08	161	156	5	116	3.105590e-02	1	exome+100bp flanks	34834024	39	110	1.119595e-06	3.157832e-06
TCGA-ZF-AA53-01A-11D-A391-08	230	226	4	168	1.739130e-02	0	coding only	34834024	53	159	1.521501e-06	4.564503e-06
TCGA-ZF-AA54-01A-11D-A391-08	235	229	6	183	2.553191e-02	0	coding only	34834024	45	177	1.291840e-06	5.081239e-06
TCGA-ZF-AA56-01A-31D-A391-08	131	128	3	101	2.290076e-02	0	coding only	34834024	27	97	7.751042e-07	2.784634e-06
TCGA-ZF-AA58-01A-12D-A42E-08	275	271	4	211	1.454545e-02	0	coding only	34834024	57	201	1.636331e-06	5.770221e-06
TCGA-ZF-AA5H-01A-11D-A391-08	90	84	6	59	6.666667e-02	1	exome+100bp flanks	34834024	25	56	7.176891e-07	1.607624e-06
TCGA-ZF-AA5N-01A-11D-A42E-08	72	71	1	57	1.388889e-02	0	coding only	34834024	11	51	3.157832e-07	1.464086e-06
TCGA-ZF-AA5P-01A-11D-A391-08	87	77	10	58	1.149425e-01	1	exome+100bp flanks	34834024	19	55	5.454437e-07	1.578916e-06