[1] "ofn"        "-oTESCA-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/20125286/ESCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/19782630/transformed.cor.cli.txt"

nPatients in clinical file=185, in cluster file=184, common to both=184
[1]  85 184
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           40                           144 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           40                           144 
[1] "AMP PEAK  2(1Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE 
                           93                            91 
  AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE 
                           93                            91 
[1] "AMP PEAK  3(1Q42.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE 
                           96                            88 
  AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE 
                           96                            88 
[1] "AMP PEAK  4(2Q14.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE 
                           60                           124 
  AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE 
                           60                           124 
[1] "AMP PEAK  5(2Q31.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE 
                           60                           124 
  AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE 
                           60                           124 
[1] "AMP PEAK  6(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          128                            56 
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          128                            56 
[1] "AMP PEAK  7(4Q21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE 
                           34                           150 
  AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE 
                           34                           150 
[1] "AMP PEAK  8(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                            98                             86 
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                            98                             86 
[1] "AMP PEAK  9(6P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                           69                           115 
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                           69                           115 
[1] "AMP PEAK 10(6Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE 
                           42                           142 
  AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE 
                           42                           142 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          126                            58 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          126                            58 
[1] "AMP PEAK 12(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          114                            70 
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          114                            70 
[1] "AMP PEAK 13(8P23.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE 
                           52                           132 
  AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE 
                           52                           132 
[1] "AMP PEAK 14(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            85                             99 
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            85                             99 
[1] "AMP PEAK 15(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           145                             39 
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           145                             39 
[1] "AMP PEAK 16(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           40                           144 
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           40                           144 
[1] "AMP PEAK 17(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                           64                           120 
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                           64                           120 
[1] "AMP PEAK 18(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE 
                          52                          132 
  AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE 
                          52                          132 
[1] "AMP PEAK 19(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          50                          134 
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          50                          134 
[1] "AMP PEAK 20(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE 
                           104                             80 
  AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE 
                           104                             80 
[1] "AMP PEAK 21(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE 
                            79                            105 
  AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE 
                            79                            105 
[1] "AMP PEAK 22(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE 
                          51                          133 
  AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE 
                          51                          133 
[1] "AMP PEAK 23(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE 
                            65                            119 
  AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE 
                            65                            119 
[1] "AMP PEAK 24(14Q21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE 
                            61                            123 
  AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE 
                            61                            123 
[1] "AMP PEAK 25(15Q26.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE 
                            58                            126 
  AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE 
                            58                            126 
[1] "AMP PEAK 26(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE 
                          75                          109 
  AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE 
                          75                          109 
[1] "AMP PEAK 27(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE 
                             69                             115 
  AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE 
                             69                             115 
[1] "AMP PEAK 28(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE 
                            59                            125 
  AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE 
                            59                            125 
[1] "AMP PEAK 29(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                            32                            152 
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                            32                            152 
[1] "AMP PEAK 30(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                          54                          130 
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                          54                          130 
[1] "AMP PEAK 31(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         69                         115 
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         69                         115 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            75                            109 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            75                            109 
[1] "DEL PEAK  2(1P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           64                           120 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           64                           120 
[1] "DEL PEAK  3(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         17                         167 
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         17                         167 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           59                           125 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           59                           125 
[1] "DEL PEAK  5(2Q33.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           36                           148 
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           36                           148 
[1] "DEL PEAK  6(3P26.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          111                            73 
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          111                            73 
[1] "DEL PEAK  7(3P14.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                          126                            58 
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                          126                            58 
[1] "DEL PEAK  8(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                          125                            59 
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                          125                            59 
[1] "DEL PEAK  9(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           33                           151 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           33                           151 
[1] "DEL PEAK 10(3Q26.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            16                            168 
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            16                            168 
[1] "DEL PEAK 11(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          106                            78 
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          106                            78 
[1] "DEL PEAK 12(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          105                            79 
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          105                            79 
[1] "DEL PEAK 13(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE 
                           99                            85 
  DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE 
                           99                            85 
[1] "DEL PEAK 14(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE 
                          112                            72 
  DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE 
                          112                            72 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           74                           110 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           74                           110 
[1] "DEL PEAK 16(6Q16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE 
                           55                           129 
  DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE 
                           55                           129 
[1] "DEL PEAK 17(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                         50                         134 
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                         50                         134 
[1] "DEL PEAK 18(7Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE 
                           56                           128 
  DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE 
                           56                           128 
[1] "DEL PEAK 19(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                           67                           117 
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                           67                           117 
[1] "DEL PEAK 20(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                           90                            94 
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                           90                            94 
[1] "DEL PEAK 21(8P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE 
                         75                         109 
  DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE 
                         75                         109 
[1] "DEL PEAK 22(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        108                          76 
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        108                          76 
[1] "DEL PEAK 23(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          141                            43 
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          141                            43 
[1] "DEL PEAK 24(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                            54                            130 
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                            54                            130 
[1] "DEL PEAK 25(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             52                             132 
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             52                             132 
[1] "DEL PEAK 26(10Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE 
                            46                            138 
  DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE 
                            46                            138 
[1] "DEL PEAK 27(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             65                             119 
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             65                             119 
[1] "DEL PEAK 28(11P15.4) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            79                            105 
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            79                            105 
[1] "DEL PEAK 29(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                          81                          103 
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                          81                          103 
[1] "DEL PEAK 30(12Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE 
                            51                            133 
  DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE 
                            51                            133 
[1] "DEL PEAK 31(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             76                             108 
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             76                             108 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            74                            110 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            74                            110 
[1] "DEL PEAK 33(13Q21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE 
                             69                             115 
  DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE 
                             69                             115 
[1] "DEL PEAK 34(14Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE 
                            51                            133 
  DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE 
                            51                            133 
[1] "DEL PEAK 35(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            63                            121 
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            63                            121 
[1] "DEL PEAK 36(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                            65                            119 
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                            65                            119 
[1] "DEL PEAK 37(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                            84                            100 
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                            84                            100 
[1] "DEL PEAK 38(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE 
                          86                           98 
  DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE 
                          86                           98 
[1] "DEL PEAK 39(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                            41                            143 
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                            41                            143 
[1] "DEL PEAK 40(18P11.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE 
                             60                             124 
  DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE 
                             60                             124 
[1] "DEL PEAK 41(18Q12.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE 
                           111                             73 
  DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE 
                           111                             73 
[1] "DEL PEAK 42(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE 
                           119                             65 
  DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE 
                           119                             65 
[1] "DEL PEAK 43(18Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE 
                           112                             72 
  DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE 
                           112                             72 
[1] "DEL PEAK 44(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                            93                             91 
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                            93                             91 
[1] "DEL PEAK 45(19Q11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE 
                          48                          136 
  DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE 
                          48                          136 
[1] "DEL PEAK 46(20P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE 
                            33                            151 
  DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE 
                            33                            151 
[1] "DEL PEAK 47(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE 
                           107                             77 
  DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE 
                           107                             77 
[1] "DEL PEAK 48(21Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE 
                           107                             77 
  DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE 
                           107                             77 
[1] "DEL PEAK 49(21Q22.12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE 
                            108                              76 
  DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE 
                            108                              76 
[1] "DEL PEAK 50(22Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                            79                            105 
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                            79                            105 
[1] "DEL PEAK 51(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                           69                           115 
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                           69                           115 
[1] "DEL PEAK 52(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                           74                           110 
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                           74                           110 
[1] "DEL PEAK 53(XQ11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE 
                           42                           142 
  DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE 
                           42                           142 
[1] "DEL PEAK 54(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE 
                            40                            144 
  DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE 
                            40                            144 
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 184 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 184 columns, 0 survival variables, and 10 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=5, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       18      7     15
  AMP PEAK  1(1P34.2) WILD-TYPE     47     37     60
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           7                            37
  CLUS_3                          15                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       19      7     14
  AMP PEAK  1(1P34.2) WILD-TYPE     57     25     62
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          19                            57
  CLUS_2                           7                            25
  CLUS_3                          14                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED        6      7     10      1      3
  AMP PEAK  1(1P34.2) WILD-TYPE     20     21     20     33      5
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           6                            20
  CLUS_2                           7                            21
  CLUS_3                          10                            20
  CLUS_4                           1                            33
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED        3      5      8      3      8
  AMP PEAK  1(1P34.2) WILD-TYPE     20     16     14     23     26
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           3                            20
  CLUS_2                           5                            16
  CLUS_3                           8                            14
  CLUS_4                           3                            23
  CLUS_5                           8                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       20     12      6      2
  AMP PEAK  1(1P34.2) WILD-TYPE     61     57     16      9
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            61
  CLUS_2                          12                            57
  CLUS_3                           6                            16
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       17      4     19
  AMP PEAK  1(1P34.2) WILD-TYPE     50     16     77
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            50
  CLUS_2                           4                            16
  CLUS_3                          19                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       20     17      3
  AMP PEAK  1(1P34.2) WILD-TYPE     64     70      9
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            64
  CLUS_2                          17                            70
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       17      4     10      9
  AMP PEAK  1(1P34.2) WILD-TYPE     45     22     52     24
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            22
  CLUS_3                          10                            52
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       17     13      7      3
  AMP PEAK  1(1P34.2) WILD-TYPE     49     53     28      8
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          13                            53
  CLUS_3                           7                            28
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       17      4     19
  AMP PEAK  1(1P34.2) WILD-TYPE     45     18     75
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            18
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       37     12     44
  AMP PEAK  2(1Q23.3) WILD-TYPE     28     32     31
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          37                            28
  CLUS_2                          12                            32
  CLUS_3                          44                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       40     11     42
  AMP PEAK  2(1Q23.3) WILD-TYPE     36     21     34
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          40                            36
  CLUS_2                          11                            21
  CLUS_3                          42                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q23.3) MUTATED       12     17     17     17      4
  AMP PEAK  2(1Q23.3) WILD-TYPE     14     11     13     17      4
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          12                            14
  CLUS_2                          17                            11
  CLUS_3                          17                            13
  CLUS_4                          17                            17
  CLUS_5                           4                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q23.3) MUTATED       10     11     11     17     18
  AMP PEAK  2(1Q23.3) WILD-TYPE     13     10     11      9     16
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          11                            10
  CLUS_3                          11                            11
  CLUS_4                          17                             9
  CLUS_5                          18                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q23.3) MUTATED       41     35     13      4
  AMP PEAK  2(1Q23.3) WILD-TYPE     40     34      9      7
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          41                            40
  CLUS_2                          35                            34
  CLUS_3                          13                             9
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       32     11     50
  AMP PEAK  2(1Q23.3) WILD-TYPE     35      9     46
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          32                            35
  CLUS_2                          11                             9
  CLUS_3                          50                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       42     47      3
  AMP PEAK  2(1Q23.3) WILD-TYPE     42     40      9
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          42                            42
  CLUS_2                          47                            40
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q23.3) MUTATED       33     11     31     17
  AMP PEAK  2(1Q23.3) WILD-TYPE     29     15     31     16
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          11                            15
  CLUS_3                          31                            31
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q23.3) MUTATED       35     40     10      5
  AMP PEAK  2(1Q23.3) WILD-TYPE     31     26     25      6
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          35                            31
  CLUS_2                          40                            26
  CLUS_3                          10                            25
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       33     10     47
  AMP PEAK  2(1Q23.3) WILD-TYPE     29     12     47
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          10                            12
  CLUS_3                          47                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q42.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       39     10     47
  AMP PEAK  3(1Q42.3) WILD-TYPE     26     34     28
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          39                            26
  CLUS_2                          10                            34
  CLUS_3                          47                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       40     13     43
  AMP PEAK  3(1Q42.3) WILD-TYPE     36     19     33
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          40                            36
  CLUS_2                          13                            19
  CLUS_3                          43                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q42.3) MUTATED       14     15     18     16      4
  AMP PEAK  3(1Q42.3) WILD-TYPE     12     13     12     18      4
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          14                            12
  CLUS_2                          15                            13
  CLUS_3                          18                            12
  CLUS_4                          16                            18
  CLUS_5                           4                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q42.3) MUTATED       10     10     12     18     17
  AMP PEAK  3(1Q42.3) WILD-TYPE     13     11     10      8     17
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                          10                            11
  CLUS_3                          12                            10
  CLUS_4                          18                             8
  CLUS_5                          17                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q42.3) MUTATED       40     38     13      5
  AMP PEAK  3(1Q42.3) WILD-TYPE     41     31      9      6
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          40                            41
  CLUS_2                          38                            31
  CLUS_3                          13                             9
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       33     10     53
  AMP PEAK  3(1Q42.3) WILD-TYPE     34     10     43
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          33                            34
  CLUS_2                          10                            10
  CLUS_3                          53                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       42     49      4
  AMP PEAK  3(1Q42.3) WILD-TYPE     42     38      8
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          42                            42
  CLUS_2                          49                            38
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q42.3) MUTATED       34      9     35     17
  AMP PEAK  3(1Q42.3) WILD-TYPE     28     17     27     16
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          34                            28
  CLUS_2                           9                            17
  CLUS_3                          35                            27
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q42.3) MUTATED       36     40     13      5
  AMP PEAK  3(1Q42.3) WILD-TYPE     30     26     22      6
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          36                            30
  CLUS_2                          40                            26
  CLUS_3                          13                            22
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       35      8     51
  AMP PEAK  3(1Q42.3) WILD-TYPE     27     14     43
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           8                            14
  CLUS_3                          51                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(2Q14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       18     13     29
  AMP PEAK  4(2Q14.2) WILD-TYPE     47     31     46
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                          13                            31
  CLUS_3                          29                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       20     12     28
  AMP PEAK  4(2Q14.2) WILD-TYPE     56     20     48
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          20                            56
  CLUS_2                          12                            20
  CLUS_3                          28                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2Q14.2) MUTATED        4     10     11     13      3
  AMP PEAK  4(2Q14.2) WILD-TYPE     22     18     19     21      5
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                           4                            22
  CLUS_2                          10                            18
  CLUS_3                          11                            19
  CLUS_4                          13                            21
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2Q14.2) MUTATED        4      5      8     10     14
  AMP PEAK  4(2Q14.2) WILD-TYPE     19     16     14     16     20
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                           4                            19
  CLUS_2                           5                            16
  CLUS_3                           8                            14
  CLUS_4                          10                            16
  CLUS_5                          14                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q14.2) MUTATED       23     26      7      4
  AMP PEAK  4(2Q14.2) WILD-TYPE     58     43     15      7
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          23                            58
  CLUS_2                          26                            43
  CLUS_3                           7                            15
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       15      9     36
  AMP PEAK  4(2Q14.2) WILD-TYPE     52     11     60
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          15                            52
  CLUS_2                           9                            11
  CLUS_3                          36                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       23     34      3
  AMP PEAK  4(2Q14.2) WILD-TYPE     61     53      9
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          23                            61
  CLUS_2                          34                            53
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q14.2) MUTATED       15      9     26     10
  AMP PEAK  4(2Q14.2) WILD-TYPE     47     17     36     23
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            17
  CLUS_3                          26                            36
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q14.2) MUTATED       18     28     10      3
  AMP PEAK  4(2Q14.2) WILD-TYPE     48     38     25      8
D4V9, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          18                            48
  CLUS_2                          28                            38
  CLUS_3                          10                            25
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       16      8     35
  AMP PEAK  4(2Q14.2) WILD-TYPE     46     14     59
D4V10, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          16                            46
  CLUS_2                           8                            14
  CLUS_3                          35                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(2Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       21      8     31
  AMP PEAK  5(2Q31.1) WILD-TYPE     44     36     44
D5V1, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          21                            44
  CLUS_2                           8                            36
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       22      8     30
  AMP PEAK  5(2Q31.1) WILD-TYPE     54     24     46
D5V2, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          22                            54
  CLUS_2                           8                            24
  CLUS_3                          30                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q31.1) MUTATED        5      8      9     12      3
  AMP PEAK  5(2Q31.1) WILD-TYPE     21     20     21     22      5
D5V3, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                           5                            21
  CLUS_2                           8                            20
  CLUS_3                           9                            21
  CLUS_4                          12                            22
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q31.1) MUTATED        5      3      6     11     12
  AMP PEAK  5(2Q31.1) WILD-TYPE     18     18     16     15     22
D5V4, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                           3                            18
  CLUS_3                           6                            16
  CLUS_4                          11                            15
  CLUS_5                          12                            22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q31.1) MUTATED       24     26      7      3
  AMP PEAK  5(2Q31.1) WILD-TYPE     57     43     15      8
D5V5, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          24                            57
  CLUS_2                          26                            43
  CLUS_3                           7                            15
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       15     10     35
  AMP PEAK  5(2Q31.1) WILD-TYPE     52     10     61
D5V6, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          15                            52
  CLUS_2                          10                            10
  CLUS_3                          35                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       24     32      4
  AMP PEAK  5(2Q31.1) WILD-TYPE     60     55      8
D5V7, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          24                            60
  CLUS_2                          32                            55
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q31.1) MUTATED       19      6     26      9
  AMP PEAK  5(2Q31.1) WILD-TYPE     43     20     36     24
D5V8, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           6                            20
  CLUS_3                          26                            36
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q31.1) MUTATED       21     28      9      1
  AMP PEAK  5(2Q31.1) WILD-TYPE     45     38     26     10
D5V9, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          28                            38
  CLUS_3                           9                            26
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       19      6     34
  AMP PEAK  5(2Q31.1) WILD-TYPE     43     16     60
D5V10, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           6                            16
  CLUS_3                          34                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       40     14     74
  AMP PEAK  6(3Q26.2) WILD-TYPE     25     30      1
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          40                            25
  CLUS_2                          14                            30
  CLUS_3                          74                             1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       41     19     68
  AMP PEAK  6(3Q26.2) WILD-TYPE     35     13      8
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          41                            35
  CLUS_2                          19                            13
  CLUS_3                          68                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       16     18     23     30      5
  AMP PEAK  6(3Q26.2) WILD-TYPE     10     10      7      4      3
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          16                            10
  CLUS_2                          18                            10
  CLUS_3                          23                             7
  CLUS_4                          30                             4
  CLUS_5                           5                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       12     12     14     25     29
  AMP PEAK  6(3Q26.2) WILD-TYPE     11      9      8      1      5
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          12                            11
  CLUS_2                          12                             9
  CLUS_3                          14                             8
  CLUS_4                          25                             1
  CLUS_5                          29                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       43     61     15      8
  AMP PEAK  6(3Q26.2) WILD-TYPE     38      8      7      3
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          43                            38
  CLUS_2                          61                             8
  CLUS_3                          15                             7
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       38      7     82
  AMP PEAK  6(3Q26.2) WILD-TYPE     29     13     14
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          38                            29
  CLUS_2                           7                            13
  CLUS_3                          82                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       44     75      8
  AMP PEAK  6(3Q26.2) WILD-TYPE     40     12      4
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          44                            40
  CLUS_2                          75                            12
  CLUS_3                           8                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       33     13     56     25
  AMP PEAK  6(3Q26.2) WILD-TYPE     29     13      6      8
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          13                            13
  CLUS_3                          56                             6
  CLUS_4                          25                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       35     62     23      6
  AMP PEAK  6(3Q26.2) WILD-TYPE     31      4     12      5
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          35                            31
  CLUS_2                          62                             4
  CLUS_3                          23                            12
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       35     11     80
  AMP PEAK  6(3Q26.2) WILD-TYPE     27     11     14
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                          11                            11
  CLUS_3                          80                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(4Q21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       10      6     18
  AMP PEAK  7(4Q21.1) WILD-TYPE     55     38     57
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          10                            55
  CLUS_2                           6                            38
  CLUS_3                          18                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       12      7     15
  AMP PEAK  7(4Q21.1) WILD-TYPE     64     25     61
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          12                            64
  CLUS_2                           7                            25
  CLUS_3                          15                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4Q21.1) MUTATED        5      7     10      3      1
  AMP PEAK  7(4Q21.1) WILD-TYPE     21     21     20     31      7
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           5                            21
  CLUS_2                           7                            21
  CLUS_3                          10                            20
  CLUS_4                           3                            31
  CLUS_5                           1                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4Q21.1) MUTATED        3      7      8      5      3
  AMP PEAK  7(4Q21.1) WILD-TYPE     20     14     14     21     31
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           3                            20
  CLUS_2                           7                            14
  CLUS_3                           8                            14
  CLUS_4                           5                            21
  CLUS_5                           3                            31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q21.1) MUTATED       14     13      3      4
  AMP PEAK  7(4Q21.1) WILD-TYPE     67     56     19      7
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          14                            67
  CLUS_2                          13                            56
  CLUS_3                           3                            19
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       12      3     19
  AMP PEAK  7(4Q21.1) WILD-TYPE     55     17     77
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          12                            55
  CLUS_2                           3                            17
  CLUS_3                          19                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       15     17      2
  AMP PEAK  7(4Q21.1) WILD-TYPE     69     70     10
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          15                            69
  CLUS_2                          17                            70
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q21.1) MUTATED        8      7     12      7
  AMP PEAK  7(4Q21.1) WILD-TYPE     54     19     50     26
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           8                            54
  CLUS_2                           7                            19
  CLUS_3                          12                            50
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q21.1) MUTATED       11     13      8      2
  AMP PEAK  7(4Q21.1) WILD-TYPE     55     53     27      9
D7V9, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          13                            53
  CLUS_3                           8                            27
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED        9      6     19
  AMP PEAK  7(4Q21.1) WILD-TYPE     53     16     75
D7V10, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           9                            53
  CLUS_2                           6                            16
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       31     11     56
  AMP PEAK  8(5P15.33) WILD-TYPE     34     33     19
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           31                             34
  CLUS_2                           11                             33
  CLUS_3                           56                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       33     15     50
  AMP PEAK  8(5P15.33) WILD-TYPE     43     17     26
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           33                             43
  CLUS_2                           15                             17
  CLUS_3                           50                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P15.33) MUTATED       12     16     18     24      5
  AMP PEAK  8(5P15.33) WILD-TYPE     14     12     12     10      3
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                           16                             12
  CLUS_3                           18                             12
  CLUS_4                           24                             10
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P15.33) MUTATED       10     12     12     19     22
  AMP PEAK  8(5P15.33) WILD-TYPE     13      9     10      7     12
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                           12                              9
  CLUS_3                           12                             10
  CLUS_4                           19                              7
  CLUS_5                           22                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P15.33) MUTATED       32     49     12      5
  AMP PEAK  8(5P15.33) WILD-TYPE     49     20     10      6
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           32                             49
  CLUS_2                           49                             20
  CLUS_3                           12                             10
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       30      5     63
  AMP PEAK  8(5P15.33) WILD-TYPE     37     15     33
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           30                             37
  CLUS_2                            5                             15
  CLUS_3                           63                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       34     60      4
  AMP PEAK  8(5P15.33) WILD-TYPE     50     27      8
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           34                             50
  CLUS_2                           60                             27
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P15.33) MUTATED       24     11     40     23
  AMP PEAK  8(5P15.33) WILD-TYPE     38     15     22     10
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           24                             38
  CLUS_2                           11                             15
  CLUS_3                           40                             22
  CLUS_4                           23                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P15.33) MUTATED       27     46     19      6
  AMP PEAK  8(5P15.33) WILD-TYPE     39     20     16      5
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           46                             20
  CLUS_3                           19                             16
  CLUS_4                            6                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       24     11     63
  AMP PEAK  8(5P15.33) WILD-TYPE     38     11     31
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           24                             38
  CLUS_2                           11                             11
  CLUS_3                           63                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35     11     23
  AMP PEAK  9(6P21.1) WILD-TYPE     30     33     52
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            30
  CLUS_2                          11                            33
  CLUS_3                          23                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35      9     25
  AMP PEAK  9(6P21.1) WILD-TYPE     41     23     51
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            41
  CLUS_2                           9                            23
  CLUS_3                          25                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       12     13      6     11      3
  AMP PEAK  9(6P21.1) WILD-TYPE     14     15     24     23      5
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          12                            14
  CLUS_2                          13                            15
  CLUS_3                           6                            24
  CLUS_4                          11                            23
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       11     10      4      9     11
  AMP PEAK  9(6P21.1) WILD-TYPE     12     11     18     17     23
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                          10                            11
  CLUS_3                           4                            18
  CLUS_4                           9                            17
  CLUS_5                          11                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       39     21      8      1
  AMP PEAK  9(6P21.1) WILD-TYPE     42     48     14     10
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          39                            42
  CLUS_2                          21                            48
  CLUS_3                           8                            14
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       30     11     28
  AMP PEAK  9(6P21.1) WILD-TYPE     37      9     68
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          30                            37
  CLUS_2                          11                             9
  CLUS_3                          28                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       41     26      1
  AMP PEAK  9(6P21.1) WILD-TYPE     43     61     11
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          41                            43
  CLUS_2                          26                            61
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       35      7     16     10
  AMP PEAK  9(6P21.1) WILD-TYPE     27     19     46     23
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           7                            19
  CLUS_3                          16                            46
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       36     18     10      4
  AMP PEAK  9(6P21.1) WILD-TYPE     30     48     25      7
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          36                            30
  CLUS_2                          18                            48
  CLUS_3                          10                            25
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35      7     26
  AMP PEAK  9(6P21.1) WILD-TYPE     27     15     68
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           7                            15
  CLUS_3                          26                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       22      8     12
  AMP PEAK 10(6Q23.3) WILD-TYPE     43     36     63
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          22                            43
  CLUS_2                           8                            36
  CLUS_3                          12                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       24      5     13
  AMP PEAK 10(6Q23.3) WILD-TYPE     52     27     63
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          24                            52
  CLUS_2                           5                            27
  CLUS_3                          13                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q23.3) MUTATED        9     10      3      2      2
  AMP PEAK 10(6Q23.3) WILD-TYPE     17     18     27     32      6
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                           9                            17
  CLUS_2                          10                            18
  CLUS_3                           3                            27
  CLUS_4                           2                            32
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q23.3) MUTATED        5     10      5      1      5
  AMP PEAK 10(6Q23.3) WILD-TYPE     18     11     17     25     29
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                          10                            11
  CLUS_3                           5                            17
  CLUS_4                           1                            25
  CLUS_5                           5                            29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q23.3) MUTATED       25     13      3      1
  AMP PEAK 10(6Q23.3) WILD-TYPE     56     56     19     10
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          25                            56
  CLUS_2                          13                            56
  CLUS_3                           3                            19
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       19      7     16
  AMP PEAK 10(6Q23.3) WILD-TYPE     48     13     80
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          19                            48
  CLUS_2                           7                            13
  CLUS_3                          16                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       26     14      1
  AMP PEAK 10(6Q23.3) WILD-TYPE     58     73     11
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          26                            58
  CLUS_2                          14                            73
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q23.3) MUTATED       22      4      9      6
  AMP PEAK 10(6Q23.3) WILD-TYPE     40     22     53     27
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          22                            40
  CLUS_2                           4                            22
  CLUS_3                           9                            53
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q23.3) MUTATED       23     10      4      4
  AMP PEAK 10(6Q23.3) WILD-TYPE     43     56     31      7
D10V9, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          23                            43
  CLUS_2                          10                            56
  CLUS_3                           4                            31
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       23      3     15
  AMP PEAK 10(6Q23.3) WILD-TYPE     39     19     79
D10V10, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           3                            19
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       49     28     49
  AMP PEAK 11(7P11.2) WILD-TYPE     16     16     26
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          28                            16
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       58     22     46
  AMP PEAK 11(7P11.2) WILD-TYPE     18     10     30
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          58                            18
  CLUS_2                          22                            10
  CLUS_3                          46                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(7P11.2) MUTATED       18     19     21     23      5
  AMP PEAK 11(7P11.2) WILD-TYPE      8      9      9     11      3
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          18                             8
  CLUS_2                          19                             9
  CLUS_3                          21                             9
  CLUS_4                          23                            11
  CLUS_5                           5                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(7P11.2) MUTATED       18     13     16     17     22
  AMP PEAK 11(7P11.2) WILD-TYPE      5      8      6      9     12
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          18                             5
  CLUS_2                          13                             8
  CLUS_3                          16                             6
  CLUS_4                          17                             9
  CLUS_5                          22                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       62     45     16      3
  AMP PEAK 11(7P11.2) WILD-TYPE     19     24      6      8
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          62                            19
  CLUS_2                          45                            24
  CLUS_3                          16                             6
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       48     18     60
  AMP PEAK 11(7P11.2) WILD-TYPE     19      2     36
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          48                            19
  CLUS_2                          18                             2
  CLUS_3                          60                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       64     56      5
  AMP PEAK 11(7P11.2) WILD-TYPE     20     31      7
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          64                            20
  CLUS_2                          56                            31
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       46     20     40     19
  AMP PEAK 11(7P11.2) WILD-TYPE     16      6     22     14
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          46                            16
  CLUS_2                          20                             6
  CLUS_3                          40                            22
  CLUS_4                          19                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       48     43     22      8
  AMP PEAK 11(7P11.2) WILD-TYPE     18     23     13      3
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          48                            18
  CLUS_2                          43                            23
  CLUS_3                          22                            13
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       45     18     58
  AMP PEAK 11(7P11.2) WILD-TYPE     17      4     36
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          45                            17
  CLUS_2                          18                             4
  CLUS_3                          58                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       41     24     49
  AMP PEAK 12(7Q21.2) WILD-TYPE     24     20     26
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          41                            24
  CLUS_2                          24                            20
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       49     15     50
  AMP PEAK 12(7Q21.2) WILD-TYPE     27     17     26
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          49                            27
  CLUS_2                          15                            17
  CLUS_3                          50                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7Q21.2) MUTATED       20     17     18     19      5
  AMP PEAK 12(7Q21.2) WILD-TYPE      6     11     12     15      3
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          20                             6
  CLUS_2                          17                            11
  CLUS_3                          18                            12
  CLUS_4                          19                            15
  CLUS_5                           5                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7Q21.2) MUTATED       16     12     13     17     21
  AMP PEAK 12(7Q21.2) WILD-TYPE      7      9      9      9     13
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          16                             7
  CLUS_2                          12                             9
  CLUS_3                          13                             9
  CLUS_4                          17                             9
  CLUS_5                          21                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       52     44     13      5
  AMP PEAK 12(7Q21.2) WILD-TYPE     29     25      9      6
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          52                            29
  CLUS_2                          44                            25
  CLUS_3                          13                             9
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       41     14     59
  AMP PEAK 12(7Q21.2) WILD-TYPE     26      6     37
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          41                            26
  CLUS_2                          14                             6
  CLUS_3                          59                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       54     54      5
  AMP PEAK 12(7Q21.2) WILD-TYPE     30     33      7
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          54                            30
  CLUS_2                          54                            33
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       36     19     37     21
  AMP PEAK 12(7Q21.2) WILD-TYPE     26      7     25     12
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          36                            26
  CLUS_2                          19                             7
  CLUS_3                          37                            25
  CLUS_4                          21                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       40     43     20      8
  AMP PEAK 12(7Q21.2) WILD-TYPE     26     23     15      3
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          40                            26
  CLUS_2                          43                            23
  CLUS_3                          20                            15
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       37     18     56
  AMP PEAK 12(7Q21.2) WILD-TYPE     25      4     38
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          37                            25
  CLUS_2                          18                             4
  CLUS_3                          56                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8P23.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       26     18      8
  AMP PEAK 13(8P23.1) WILD-TYPE     39     26     67
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          26                            39
  CLUS_2                          18                            26
  CLUS_3                           8                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       32      5     15
  AMP PEAK 13(8P23.1) WILD-TYPE     44     27     61
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          32                            44
  CLUS_2                           5                            27
  CLUS_3                          15                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(8P23.1) MUTATED       10      8      8      8      2
  AMP PEAK 13(8P23.1) WILD-TYPE     16     20     22     26      6
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          10                            16
  CLUS_2                           8                            20
  CLUS_3                           8                            22
  CLUS_4                           8                            26
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(8P23.1) MUTATED       11      7      6      5      7
  AMP PEAK 13(8P23.1) WILD-TYPE     12     14     16     21     27
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                           7                            14
  CLUS_3                           6                            16
  CLUS_4                           5                            21
  CLUS_5                           7                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P23.1) MUTATED       33     13      4      2
  AMP PEAK 13(8P23.1) WILD-TYPE     48     56     18      9
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          33                            48
  CLUS_2                          13                            56
  CLUS_3                           4                            18
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       32      2     18
  AMP PEAK 13(8P23.1) WILD-TYPE     35     18     78
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          32                            35
  CLUS_2                           2                            18
  CLUS_3                          18                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       33     15      3
  AMP PEAK 13(8P23.1) WILD-TYPE     51     72      9
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          33                            51
  CLUS_2                          15                            72
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P23.1) MUTATED       25      9     10      7
  AMP PEAK 13(8P23.1) WILD-TYPE     37     17     52     26
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           9                            17
  CLUS_3                          10                            52
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P23.1) MUTATED       28      7     11      2
  AMP PEAK 13(8P23.1) WILD-TYPE     38     59     24      9
D13V9, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          28                            38
  CLUS_2                           7                            59
  CLUS_3                          11                            24
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       25      8     15
  AMP PEAK 13(8P23.1) WILD-TYPE     37     14     79
D13V10, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           8                            14
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       34     19     32
  AMP PEAK 14(8P11.21) WILD-TYPE     31     25     43
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           34                             31
  CLUS_2                           19                             25
  CLUS_3                           32                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       37     10     38
  AMP PEAK 14(8P11.21) WILD-TYPE     39     22     38
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           37                             39
  CLUS_2                           10                             22
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(8P11.21) MUTATED       12     11     17     17      3
  AMP PEAK 14(8P11.21) WILD-TYPE     14     17     13     17      5
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                           11                             17
  CLUS_3                           17                             13
  CLUS_4                           17                             17
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(8P11.21) MUTATED        9      9     12     15     15
  AMP PEAK 14(8P11.21) WILD-TYPE     14     12     10     11     19
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            9                             14
  CLUS_2                            9                             12
  CLUS_3                           12                             10
  CLUS_4                           15                             11
  CLUS_5                           15                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       37     33     10      5
  AMP PEAK 14(8P11.21) WILD-TYPE     44     36     12      6
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           37                             44
  CLUS_2                           33                             36
  CLUS_3                           10                             12
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       35      5     45
  AMP PEAK 14(8P11.21) WILD-TYPE     32     15     51
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           35                             32
  CLUS_2                            5                             15
  CLUS_3                           45                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       40     41      3
  AMP PEAK 14(8P11.21) WILD-TYPE     44     46      9
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           40                             44
  CLUS_2                           41                             46
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       30     11     28     15
  AMP PEAK 14(8P11.21) WILD-TYPE     32     15     34     18
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           30                             32
  CLUS_2                           11                             15
  CLUS_3                           28                             34
  CLUS_4                           15                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       33     30     14      4
  AMP PEAK 14(8P11.21) WILD-TYPE     33     36     21      7
D14V9, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           33                             33
  CLUS_2                           30                             36
  CLUS_3                           14                             21
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       31     10     40
  AMP PEAK 14(8P11.21) WILD-TYPE     31     12     54
D14V10, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           31                             31
  CLUS_2                           10                             12
  CLUS_3                           40                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       56     26     63
  AMP PEAK 15(8Q24.21) WILD-TYPE      9     18     12
D15V1, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           56                              9
  CLUS_2                           26                             18
  CLUS_3                           63                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       59     20     66
  AMP PEAK 15(8Q24.21) WILD-TYPE     17     12     10
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           59                             17
  CLUS_2                           20                             12
  CLUS_3                           66                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8Q24.21) MUTATED       21     22     21     33      5
  AMP PEAK 15(8Q24.21) WILD-TYPE      5      6      9      1      3
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           21                              5
  CLUS_2                           22                              6
  CLUS_3                           21                              9
  CLUS_4                           33                              1
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8Q24.21) MUTATED       19     16     14     25     28
  AMP PEAK 15(8Q24.21) WILD-TYPE      4      5      8      1      6
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           19                              4
  CLUS_2                           16                              5
  CLUS_3                           14                              8
  CLUS_4                           25                              1
  CLUS_5                           28                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q24.21) MUTATED       62     60     15      7
  AMP PEAK 15(8Q24.21) WILD-TYPE     19      9      7      4
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           62                             19
  CLUS_2                           60                              9
  CLUS_3                           15                              7
  CLUS_4                            7                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       54     12     78
  AMP PEAK 15(8Q24.21) WILD-TYPE     13      8     18
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           54                             13
  CLUS_2                           12                              8
  CLUS_3                           78                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       66     73      5
  AMP PEAK 15(8Q24.21) WILD-TYPE     18     14      7
D15V7, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           66                             18
  CLUS_2                           73                             14
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q24.21) MUTATED       51     16     48     29
  AMP PEAK 15(8Q24.21) WILD-TYPE     11     10     14      4
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           51                             11
  CLUS_2                           16                             10
  CLUS_3                           48                             14
  CLUS_4                           29                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q24.21) MUTATED       54     54     24      8
  AMP PEAK 15(8Q24.21) WILD-TYPE     12     12     11      3
D15V9, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           54                             12
  CLUS_2                           54                             12
  CLUS_3                           24                             11
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       52     14     74
  AMP PEAK 15(8Q24.21) WILD-TYPE     10      8     20
D15V10, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           52                             10
  CLUS_2                           14                              8
  CLUS_3                           74                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       19      5     16
  AMP PEAK 16(9P13.3) WILD-TYPE     46     39     59
D16V1, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          19                            46
  CLUS_2                           5                            39
  CLUS_3                          16                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       21      3     16
  AMP PEAK 16(9P13.3) WILD-TYPE     55     29     60
D16V2, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            55
  CLUS_2                           3                            29
  CLUS_3                          16                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(9P13.3) MUTATED        7      5      9      9      2
  AMP PEAK 16(9P13.3) WILD-TYPE     19     23     21     25      6
D16V3, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                           7                            19
  CLUS_2                           5                            23
  CLUS_3                           9                            21
  CLUS_4                           9                            25
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(9P13.3) MUTATED        6      4      7      8      7
  AMP PEAK 16(9P13.3) WILD-TYPE     17     17     15     18     27
D16V4, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                           6                            17
  CLUS_2                           4                            17
  CLUS_3                           7                            15
  CLUS_4                           8                            18
  CLUS_5                           7                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9P13.3) MUTATED       19     14      4      3
  AMP PEAK 16(9P13.3) WILD-TYPE     62     55     18      8
D16V5, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          19                            62
  CLUS_2                          14                            55
  CLUS_3                           4                            18
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       17      4     19
  AMP PEAK 16(9P13.3) WILD-TYPE     50     16     77
D16V6, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          17                            50
  CLUS_2                           4                            16
  CLUS_3                          19                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       21     17      2
  AMP PEAK 16(9P13.3) WILD-TYPE     63     70     10
D16V7, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            63
  CLUS_2                          17                            70
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9P13.3) MUTATED       17      4     16      3
  AMP PEAK 16(9P13.3) WILD-TYPE     45     22     46     30
D16V8, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            22
  CLUS_3                          16                            46
  CLUS_4                           3                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9P13.3) MUTATED       18     15      6      1
  AMP PEAK 16(9P13.3) WILD-TYPE     48     51     29     10
D16V9, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          18                            48
  CLUS_2                          15                            51
  CLUS_3                           6                            29
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       17      4     19
  AMP PEAK 16(9P13.3) WILD-TYPE     45     18     75
D16V10, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            18
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       25      8     31
  AMP PEAK 17(9Q34.3) WILD-TYPE     40     36     44
D17V1, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                           8                            36
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       24      8     32
  AMP PEAK 17(9Q34.3) WILD-TYPE     52     24     44
D17V2, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          24                            52
  CLUS_2                           8                            24
  CLUS_3                          32                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(9Q34.3) MUTATED        5     11     11     16      4
  AMP PEAK 17(9Q34.3) WILD-TYPE     21     17     19     18      4
D17V3, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                           5                            21
  CLUS_2                          11                            17
  CLUS_3                          11                            19
  CLUS_4                          16                            18
  CLUS_5                           4                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(9Q34.3) MUTATED        8      7      6     17      9
  AMP PEAK 17(9Q34.3) WILD-TYPE     15     14     16      9     25
D17V4, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                           8                            15
  CLUS_2                           7                            14
  CLUS_3                           6                            16
  CLUS_4                          17                             9
  CLUS_5                           9                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       24     31      5      3
  AMP PEAK 17(9Q34.3) WILD-TYPE     57     38     17      8
D17V5, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          24                            57
  CLUS_2                          31                            38
  CLUS_3                           5                            17
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       21      6     36
  AMP PEAK 17(9Q34.3) WILD-TYPE     46     14     60
D17V6, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          21                            46
  CLUS_2                           6                            14
  CLUS_3                          36                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       27     34      2
  AMP PEAK 17(9Q34.3) WILD-TYPE     57     53     10
D17V7, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          27                            57
  CLUS_2                          34                            53
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       19      9     28      7
  AMP PEAK 17(9Q34.3) WILD-TYPE     43     17     34     26
D17V8, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           9                            17
  CLUS_3                          28                            34
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       21     30      8      3
  AMP PEAK 17(9Q34.3) WILD-TYPE     45     36     27      8
D17V9, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          30                            36
  CLUS_3                           8                            27
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       19      8     35
  AMP PEAK 17(9Q34.3) WILD-TYPE     43     14     59
D17V10, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           8                            14
  CLUS_3                          35                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       23      8     21
  AMP PEAK 18(11P13) WILD-TYPE     42     36     54
D18V1, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         23                           42
  CLUS_2                          8                           36
  CLUS_3                         21                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       25      9     18
  AMP PEAK 18(11P13) WILD-TYPE     51     23     58
D18V2, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         25                           51
  CLUS_2                          9                           23
  CLUS_3                         18                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(11P13) MUTATED        8      6      8      9      3
  AMP PEAK 18(11P13) WILD-TYPE     18     22     22     25      5
D18V3, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                          8                           18
  CLUS_2                          6                           22
  CLUS_3                          8                           22
  CLUS_4                          9                           25
  CLUS_5                          3                            5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(11P13) MUTATED        6      5      9      6      8
  AMP PEAK 18(11P13) WILD-TYPE     17     16     13     20     26
D18V4, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                          6                           17
  CLUS_2                          5                           16
  CLUS_3                          9                           13
  CLUS_4                          6                           20
  CLUS_5                          8                           26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11P13) MUTATED       26     19      5      2
  AMP PEAK 18(11P13) WILD-TYPE     55     50     17      9
D18V5, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         26                           55
  CLUS_2                         19                           50
  CLUS_3                          5                           17
  CLUS_4                          2                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       22      7     23
  AMP PEAK 18(11P13) WILD-TYPE     45     13     73
D18V6, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         22                           45
  CLUS_2                          7                           13
  CLUS_3                         23                           73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       28     19      4
  AMP PEAK 18(11P13) WILD-TYPE     56     68      8
D18V7, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         28                           56
  CLUS_2                         19                           68
  CLUS_3                          4                            8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11P13) MUTATED       21      8     18      4
  AMP PEAK 18(11P13) WILD-TYPE     41     18     44     29
D18V8, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          8                           18
  CLUS_3                         18                           44
  CLUS_4                          4                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11P13) MUTATED       23     17      8      3
  AMP PEAK 18(11P13) WILD-TYPE     43     49     27      8
D18V9, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         23                           43
  CLUS_2                         17                           49
  CLUS_3                          8                           27
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       21      8     22
  AMP PEAK 18(11P13) WILD-TYPE     41     14     72
D18V10, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          8                           14
  CLUS_3                         22                           72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       17      7     26
  AMP PEAK 19(11P13) WILD-TYPE     48     37     49
D19V1, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         17                           48
  CLUS_2                          7                           37
  CLUS_3                         26                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       20      8     22
  AMP PEAK 19(11P13) WILD-TYPE     56     24     54
D19V2, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         20                           56
  CLUS_2                          8                           24
  CLUS_3                         22                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(11P13) MUTATED        7      5     10     10      3
  AMP PEAK 19(11P13) WILD-TYPE     19     23     20     24      5
D19V3, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          7                           19
  CLUS_2                          5                           23
  CLUS_3                         10                           20
  CLUS_4                         10                           24
  CLUS_5                          3                            5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(11P13) MUTATED        5      4      9      9      8
  AMP PEAK 19(11P13) WILD-TYPE     18     17     13     17     26
D19V4, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          5                           18
  CLUS_2                          4                           17
  CLUS_3                          9                           13
  CLUS_4                          9                           17
  CLUS_5                          8                           26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED       21     22      4      3
  AMP PEAK 19(11P13) WILD-TYPE     60     47     18      8
D19V5, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         21                           60
  CLUS_2                         22                           47
  CLUS_3                          4                           18
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       18      5     27
  AMP PEAK 19(11P13) WILD-TYPE     49     15     69
D19V6, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         18                           49
  CLUS_2                          5                           15
  CLUS_3                         27                           69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       22     24      3
  AMP PEAK 19(11P13) WILD-TYPE     62     63      9
D19V7, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         22                           62
  CLUS_2                         24                           63
  CLUS_3                          3                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED       15      8     19      7
  AMP PEAK 19(11P13) WILD-TYPE     47     18     43     26
D19V8, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         15                           47
  CLUS_2                          8                           18
  CLUS_3                         19                           43
  CLUS_4                          7                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED       17     21      8      3
  AMP PEAK 19(11P13) WILD-TYPE     49     45     27      8
D19V9, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         17                           49
  CLUS_2                         21                           45
  CLUS_3                          8                           27
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       15      8     26
  AMP PEAK 19(11P13) WILD-TYPE     47     14     68
D19V10, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         15                           47
  CLUS_2                          8                           14
  CLUS_3                         26                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       28     15     61
  AMP PEAK 20(11Q13.3) WILD-TYPE     37     29     14
D20V1, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           28                             37
  CLUS_2                           15                             29
  CLUS_3                           61                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       32     20     52
  AMP PEAK 20(11Q13.3) WILD-TYPE     44     12     24
D20V2, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           32                             44
  CLUS_2                           20                             12
  CLUS_3                           52                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(11Q13.3) MUTATED        9     23     17     23      4
  AMP PEAK 20(11Q13.3) WILD-TYPE     17      5     13     11      4
D20V3, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                            9                             17
  CLUS_2                           23                              5
  CLUS_3                           17                             13
  CLUS_4                           23                             11
  CLUS_5                            4                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(11Q13.3) MUTATED        7     17     13     17     22
  AMP PEAK 20(11Q13.3) WILD-TYPE     16      4      9      9     12
D20V4, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                           17                              4
  CLUS_3                           13                              9
  CLUS_4                           17                              9
  CLUS_5                           22                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q13.3) MUTATED       35     50     14      4
  AMP PEAK 20(11Q13.3) WILD-TYPE     46     19      8      7
D20V5, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           35                             46
  CLUS_2                           50                             19
  CLUS_3                           14                              8
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       27     10     66
  AMP PEAK 20(11Q13.3) WILD-TYPE     40     10     30
D20V6, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           27                             40
  CLUS_2                           10                             10
  CLUS_3                           66                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       36     61      6
  AMP PEAK 20(11Q13.3) WILD-TYPE     48     26      6
D20V7, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           36                             48
  CLUS_2                           61                             26
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q13.3) MUTATED       29      8     43     23
  AMP PEAK 20(11Q13.3) WILD-TYPE     33     18     19     10
D20V8, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           29                             33
  CLUS_2                            8                             18
  CLUS_3                           43                             19
  CLUS_4                           23                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q13.3) MUTATED       31     45     19      7
  AMP PEAK 20(11Q13.3) WILD-TYPE     35     21     16      4
D20V9, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           31                             35
  CLUS_2                           45                             21
  CLUS_3                           19                             16
  CLUS_4                            7                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       30      7     65
  AMP PEAK 20(11Q13.3) WILD-TYPE     32     15     29
D20V10, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           30                             32
  CLUS_2                            7                             15
  CLUS_3                           65                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       26     13     40
  AMP PEAK 21(12P12.1) WILD-TYPE     39     31     35
D21V1, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           26                             39
  CLUS_2                           13                             31
  CLUS_3                           40                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       26     15     38
  AMP PEAK 21(12P12.1) WILD-TYPE     50     17     38
D21V2, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           26                             50
  CLUS_2                           15                             17
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(12P12.1) MUTATED       12     12      9     19      5
  AMP PEAK 21(12P12.1) WILD-TYPE     14     16     21     15      3
D21V3, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                           12                             16
  CLUS_3                            9                             21
  CLUS_4                           19                             15
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(12P12.1) MUTATED        9      8      8     14     18
  AMP PEAK 21(12P12.1) WILD-TYPE     14     13     14     12     16
D21V4, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                            9                             14
  CLUS_2                            8                             13
  CLUS_3                            8                             14
  CLUS_4                           14                             12
  CLUS_5                           18                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P12.1) MUTATED       25     36     13      5
  AMP PEAK 21(12P12.1) WILD-TYPE     56     33      9      6
D21V5, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           25                             56
  CLUS_2                           36                             33
  CLUS_3                           13                              9
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       21      8     50
  AMP PEAK 21(12P12.1) WILD-TYPE     46     12     46
D21V6, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           21                             46
  CLUS_2                            8                             12
  CLUS_3                           50                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       29     45      4
  AMP PEAK 21(12P12.1) WILD-TYPE     55     42      8
D21V7, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           29                             55
  CLUS_2                           45                             42
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P12.1) MUTATED       20     10     34     14
  AMP PEAK 21(12P12.1) WILD-TYPE     42     16     28     19
D21V8, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             16
  CLUS_3                           34                             28
  CLUS_4                           14                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P12.1) MUTATED       23     37     12      5
  AMP PEAK 21(12P12.1) WILD-TYPE     43     29     23      6
D21V9, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           23                             43
  CLUS_2                           37                             29
  CLUS_3                           12                             23
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       20     10     47
  AMP PEAK 21(12P12.1) WILD-TYPE     42     12     47
D21V10, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             12
  CLUS_3                           47                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       20      7     24
  AMP PEAK 22(12Q15) WILD-TYPE     45     37     51
D22V1, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         20                           45
  CLUS_2                          7                           37
  CLUS_3                         24                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       20      7     24
  AMP PEAK 22(12Q15) WILD-TYPE     56     25     52
D22V2, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         20                           56
  CLUS_2                          7                           25
  CLUS_3                         24                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(12Q15) MUTATED       11      5      9      9      2
  AMP PEAK 22(12Q15) WILD-TYPE     15     23     21     25      6
D22V3, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         11                           15
  CLUS_2                          5                           23
  CLUS_3                          9                           21
  CLUS_4                          9                           25
  CLUS_5                          2                            6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(12Q15) MUTATED        7      4      7      9      9
  AMP PEAK 22(12Q15) WILD-TYPE     16     17     15     17     25
D22V4, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                          7                           16
  CLUS_2                          4                           17
  CLUS_3                          7                           15
  CLUS_4                          9                           17
  CLUS_5                          9                           25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q15) MUTATED       21     24      5      1
  AMP PEAK 22(12Q15) WILD-TYPE     60     45     17     10
D22V5, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         21                           60
  CLUS_2                         24                           45
  CLUS_3                          5                           17
  CLUS_4                          1                           10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       18      5     28
  AMP PEAK 22(12Q15) WILD-TYPE     49     15     68
D22V6, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         18                           49
  CLUS_2                          5                           15
  CLUS_3                         28                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       23     26      1
  AMP PEAK 22(12Q15) WILD-TYPE     61     61     11
D22V7, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         23                           61
  CLUS_2                         26                           61
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q15) MUTATED       14      9     19      8
  AMP PEAK 22(12Q15) WILD-TYPE     48     17     43     25
D22V8, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         14                           48
  CLUS_2                          9                           17
  CLUS_3                         19                           43
  CLUS_4                          8                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q15) MUTATED       16     21      7      5
  AMP PEAK 22(12Q15) WILD-TYPE     50     45     28      6
D22V9, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         16                           50
  CLUS_2                         21                           45
  CLUS_3                          7                           28
  CLUS_4                          5                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       13      9     27
  AMP PEAK 22(12Q15) WILD-TYPE     49     13     67
D22V10, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         13                           49
  CLUS_2                          9                           13
  CLUS_3                         27                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       34     13     18
  AMP PEAK 23(13Q22.1) WILD-TYPE     31     31     57
D23V1, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           34                             31
  CLUS_2                           13                             31
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       37      8     20
  AMP PEAK 23(13Q22.1) WILD-TYPE     39     24     56
D23V2, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           37                             39
  CLUS_2                            8                             24
  CLUS_3                           20                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(13Q22.1) MUTATED        8     10      9     11      3
  AMP PEAK 23(13Q22.1) WILD-TYPE     18     18     21     23      5
D23V3, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                            8                             18
  CLUS_2                           10                             18
  CLUS_3                            9                             21
  CLUS_4                           11                             23
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(13Q22.1) MUTATED       11      6      6     11      7
  AMP PEAK 23(13Q22.1) WILD-TYPE     12     15     16     15     27
D23V4, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                            6                             15
  CLUS_3                            6                             16
  CLUS_4                           11                             15
  CLUS_5                            7                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(13Q22.1) MUTATED       38     19      6      2
  AMP PEAK 23(13Q22.1) WILD-TYPE     43     50     16      9
D23V5, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           38                             43
  CLUS_2                           19                             50
  CLUS_3                            6                             16
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       30     12     23
  AMP PEAK 23(13Q22.1) WILD-TYPE     37      8     73
D23V6, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           30                             37
  CLUS_2                           12                              8
  CLUS_3                           23                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       42     21      1
  AMP PEAK 23(13Q22.1) WILD-TYPE     42     66     11
D23V7, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           42                             42
  CLUS_2                           21                             66
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(13Q22.1) MUTATED       31     12     14      7
  AMP PEAK 23(13Q22.1) WILD-TYPE     31     14     48     26
D23V8, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           31                             31
  CLUS_2                           12                             14
  CLUS_3                           14                             48
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(13Q22.1) MUTATED       34     18      9      3
  AMP PEAK 23(13Q22.1) WILD-TYPE     32     48     26      8
D23V9, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           34                             32
  CLUS_2                           18                             48
  CLUS_3                            9                             26
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       33     10     21
  AMP PEAK 23(13Q22.1) WILD-TYPE     29     12     73
D23V10, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           10                             12
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(14Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       19      6     36
  AMP PEAK 24(14Q21.1) WILD-TYPE     46     38     39
D24V1, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           19                             46
  CLUS_2                            6                             38
  CLUS_3                           36                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       18      8     35
  AMP PEAK 24(14Q21.1) WILD-TYPE     58     24     41
D24V2, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           18                             58
  CLUS_2                            8                             24
  CLUS_3                           35                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(14Q21.1) MUTATED        7      6     10     18      4
  AMP PEAK 24(14Q21.1) WILD-TYPE     19     22     20     16      4
D24V3, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                            7                             19
  CLUS_2                            6                             22
  CLUS_3                           10                             20
  CLUS_4                           18                             16
  CLUS_5                            4                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(14Q21.1) MUTATED        7      4      7     13     14
  AMP PEAK 24(14Q21.1) WILD-TYPE     16     17     15     13     20
D24V4, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                            4                             17
  CLUS_3                            7                             15
  CLUS_4                           13                             13
  CLUS_5                           14                             20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(14Q21.1) MUTATED       18     31      9      3
  AMP PEAK 24(14Q21.1) WILD-TYPE     63     38     13      8
D24V5, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           18                             63
  CLUS_2                           31                             38
  CLUS_3                            9                             13
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       17      2     42
  AMP PEAK 24(14Q21.1) WILD-TYPE     50     18     54
D24V6, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           17                             50
  CLUS_2                            2                             18
  CLUS_3                           42                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       19     39      2
  AMP PEAK 24(14Q21.1) WILD-TYPE     65     48     10
D24V7, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           19                             65
  CLUS_2                           39                             48
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(14Q21.1) MUTATED       14      5     31     10
  AMP PEAK 24(14Q21.1) WILD-TYPE     48     21     31     23
D24V8, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           14                             48
  CLUS_2                            5                             21
  CLUS_3                           31                             31
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(14Q21.1) MUTATED       15     29     11      5
  AMP PEAK 24(14Q21.1) WILD-TYPE     51     37     24      6
D24V9, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           15                             51
  CLUS_2                           29                             37
  CLUS_3                           11                             24
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       14      5     41
  AMP PEAK 24(14Q21.1) WILD-TYPE     48     17     53
D24V10, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           14                             48
  CLUS_2                            5                             17
  CLUS_3                           41                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(15Q26.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       30     10     18
  AMP PEAK 25(15Q26.1) WILD-TYPE     35     34     57
D25V1, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           30                             35
  CLUS_2                           10                             34
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       31      9     18
  AMP PEAK 25(15Q26.1) WILD-TYPE     45     23     58
D25V2, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           31                             45
  CLUS_2                            9                             23
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(15Q26.1) MUTATED       10     11      5      9      3
  AMP PEAK 25(15Q26.1) WILD-TYPE     16     17     25     25      5
D25V3, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           10                             16
  CLUS_2                           11                             17
  CLUS_3                            5                             25
  CLUS_4                            9                             25
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(15Q26.1) MUTATED       11     10      4      5      8
  AMP PEAK 25(15Q26.1) WILD-TYPE     12     11     18     21     26
D25V4, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           10                             11
  CLUS_3                            4                             18
  CLUS_4                            5                             21
  CLUS_5                            8                             26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(15Q26.1) MUTATED       34     15      7      1
  AMP PEAK 25(15Q26.1) WILD-TYPE     47     54     15     10
D25V5, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           34                             47
  CLUS_2                           15                             54
  CLUS_3                            7                             15
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       27      9     21
  AMP PEAK 25(15Q26.1) WILD-TYPE     40     11     75
D25V6, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           27                             40
  CLUS_2                            9                             11
  CLUS_3                           21                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       36     21      1
  AMP PEAK 25(15Q26.1) WILD-TYPE     48     66     11
D25V7, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           36                             48
  CLUS_2                           21                             66
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(15Q26.1) MUTATED       28      8     14      8
  AMP PEAK 25(15Q26.1) WILD-TYPE     34     18     48     25
D25V8, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            8                             18
  CLUS_3                           14                             48
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(15Q26.1) MUTATED       30     16      8      4
  AMP PEAK 25(15Q26.1) WILD-TYPE     36     50     27      7
D25V9, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           30                             36
  CLUS_2                           16                             50
  CLUS_3                            8                             27
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       28      8     22
  AMP PEAK 25(15Q26.1) WILD-TYPE     34     14     72
D25V10, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            8                             14
  CLUS_3                           22                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       37     15     23
  AMP PEAK 26(17Q12) WILD-TYPE     28     29     52
D26V1, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         37                           28
  CLUS_2                         15                           29
  CLUS_3                         23                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       41      7     27
  AMP PEAK 26(17Q12) WILD-TYPE     35     25     49
D26V2, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         41                           35
  CLUS_2                          7                           25
  CLUS_3                         27                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(17Q12) MUTATED       12      9     10      8      4
  AMP PEAK 26(17Q12) WILD-TYPE     14     19     20     26      4
D26V3, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         12                           14
  CLUS_2                          9                           19
  CLUS_3                         10                           20
  CLUS_4                          8                           26
  CLUS_5                          4                            4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(17Q12) MUTATED       10      7      9      9      8
  AMP PEAK 26(17Q12) WILD-TYPE     13     14     13     17     26
D26V4, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         10                           13
  CLUS_2                          7                           14
  CLUS_3                          9                           13
  CLUS_4                          9                           17
  CLUS_5                          8                           26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q12) MUTATED       43     23      6      3
  AMP PEAK 26(17Q12) WILD-TYPE     38     46     16      8
D26V5, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         43                           38
  CLUS_2                         23                           46
  CLUS_3                          6                           16
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       38      8     29
  AMP PEAK 26(17Q12) WILD-TYPE     29     12     67
D26V6, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         38                           29
  CLUS_2                          8                           12
  CLUS_3                         29                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       45     27      2
  AMP PEAK 26(17Q12) WILD-TYPE     39     60     10
D26V7, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         45                           39
  CLUS_2                         27                           60
  CLUS_3                          2                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q12) MUTATED       32     14     18     10
  AMP PEAK 26(17Q12) WILD-TYPE     30     12     44     23
D26V8, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         32                           30
  CLUS_2                         14                           12
  CLUS_3                         18                           44
  CLUS_4                         10                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q12) MUTATED       36     20     11      4
  AMP PEAK 26(17Q12) WILD-TYPE     30     46     24      7
D26V9, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         36                           30
  CLUS_2                         20                           46
  CLUS_3                         11                           24
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       32     13     26
  AMP PEAK 26(17Q12) WILD-TYPE     30      9     68
D26V10, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         32                           30
  CLUS_2                         13                            9
  CLUS_3                         26                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       26     10     33
  AMP PEAK 27(18P11.32) WILD-TYPE     39     34     42
D27V1, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            26                              39
  CLUS_2                            10                              34
  CLUS_3                            33                              42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       22     15     32
  AMP PEAK 27(18P11.32) WILD-TYPE     54     17     44
D27V2, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            22                              54
  CLUS_2                            15                              17
  CLUS_3                            32                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(18P11.32) MUTATED       12      9     11     16      3
  AMP PEAK 27(18P11.32) WILD-TYPE     14     19     19     18      5
D27V3, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            12                              14
  CLUS_2                             9                              19
  CLUS_3                            11                              19
  CLUS_4                            16                              18
  CLUS_5                             3                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(18P11.32) MUTATED       10      6      9     14     12
  AMP PEAK 27(18P11.32) WILD-TYPE     13     15     13     12     22
D27V4, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            10                              13
  CLUS_2                             6                              15
  CLUS_3                             9                              13
  CLUS_4                            14                              12
  CLUS_5                            12                              22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18P11.32) MUTATED       24     32     10      3
  AMP PEAK 27(18P11.32) WILD-TYPE     57     37     12      8
D27V5, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            24                              57
  CLUS_2                            32                              37
  CLUS_3                            10                              12
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       22      5     42
  AMP PEAK 27(18P11.32) WILD-TYPE     45     15     54
D27V6, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            22                              45
  CLUS_2                             5                              15
  CLUS_3                            42                              54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       27     40      1
  AMP PEAK 27(18P11.32) WILD-TYPE     57     47     11
D27V7, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            27                              57
  CLUS_2                            40                              47
  CLUS_3                             1                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18P11.32) MUTATED       20      8     26     14
  AMP PEAK 27(18P11.32) WILD-TYPE     42     18     36     19
D27V8, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             8                              18
  CLUS_3                            26                              36
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18P11.32) MUTATED       23     30     10      4
  AMP PEAK 27(18P11.32) WILD-TYPE     43     36     25      7
D27V9, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            23                              43
  CLUS_2                            30                              36
  CLUS_3                            10                              25
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       20      8     39
  AMP PEAK 27(18P11.32) WILD-TYPE     42     14     55
D27V10, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             8                              14
  CLUS_3                            39                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       30     11     18
  AMP PEAK 28(18Q11.2) WILD-TYPE     35     33     57
D28V1, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           30                             35
  CLUS_2                           11                             33
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       34      8     17
  AMP PEAK 28(18Q11.2) WILD-TYPE     42     24     59
D28V2, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           34                             42
  CLUS_2                            8                             24
  CLUS_3                           17                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(18Q11.2) MUTATED       13      8     10      9      0
  AMP PEAK 28(18Q11.2) WILD-TYPE     13     20     20     25      8
D28V3, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           13                             13
  CLUS_2                            8                             20
  CLUS_3                           10                             20
  CLUS_4                            9                             25
  CLUS_5                            0                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(18Q11.2) MUTATED       10      7     10      7      6
  AMP PEAK 28(18Q11.2) WILD-TYPE     13     14     12     19     28
D28V4, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            7                             14
  CLUS_3                           10                             12
  CLUS_4                            7                             19
  CLUS_5                            6                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(18Q11.2) MUTATED       35     18      4      2
  AMP PEAK 28(18Q11.2) WILD-TYPE     46     51     18      9
D28V5, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           35                             46
  CLUS_2                           18                             51
  CLUS_3                            4                             18
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       28     10     21
  AMP PEAK 28(18Q11.2) WILD-TYPE     39     10     75
D28V6, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           28                             39
  CLUS_2                           10                             10
  CLUS_3                           21                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       38     21      0
  AMP PEAK 28(18Q11.2) WILD-TYPE     46     66     12
D28V7, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           38                             46
  CLUS_2                           21                             66
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(18Q11.2) MUTATED       28     11     14      6
  AMP PEAK 28(18Q11.2) WILD-TYPE     34     15     48     27
D28V8, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                           11                             15
  CLUS_3                           14                             48
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(18Q11.2) MUTATED       31     14     10      3
  AMP PEAK 28(18Q11.2) WILD-TYPE     35     52     25      8
D28V9, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           31                             35
  CLUS_2                           14                             52
  CLUS_3                           10                             25
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       28     11     19
  AMP PEAK 28(18Q11.2) WILD-TYPE     34     11     75
D28V10, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                           11                             11
  CLUS_3                           19                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       11      5     16
  AMP PEAK 29(19P13.2) WILD-TYPE     54     39     59
D29V1, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            5                             39
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       12      2     18
  AMP PEAK 29(19P13.2) WILD-TYPE     64     30     58
D29V2, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           12                             64
  CLUS_2                            2                             30
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(19P13.2) MUTATED        2      5      6     10      1
  AMP PEAK 29(19P13.2) WILD-TYPE     24     23     24     24      7
D29V3, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            2                             24
  CLUS_2                            5                             23
  CLUS_3                            6                             24
  CLUS_4                           10                             24
  CLUS_5                            1                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(19P13.2) MUTATED        2      4      4      4     10
  AMP PEAK 29(19P13.2) WILD-TYPE     21     17     18     22     24
D29V4, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            2                             21
  CLUS_2                            4                             17
  CLUS_3                            4                             18
  CLUS_4                            4                             22
  CLUS_5                           10                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       11     17      3      1
  AMP PEAK 29(19P13.2) WILD-TYPE     70     52     19     10
D29V5, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           11                             70
  CLUS_2                           17                             52
  CLUS_3                            3                             19
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED        8      4     20
  AMP PEAK 29(19P13.2) WILD-TYPE     59     16     76
D29V6, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            8                             59
  CLUS_2                            4                             16
  CLUS_3                           20                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       12     19      0
  AMP PEAK 29(19P13.2) WILD-TYPE     72     68     12
D29V7, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           12                             72
  CLUS_2                           19                             68
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED        7      5     11      8
  AMP PEAK 29(19P13.2) WILD-TYPE     55     21     51     25
D29V8, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            7                             55
  CLUS_2                            5                             21
  CLUS_3                           11                             51
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       11     14      4      0
  AMP PEAK 29(19P13.2) WILD-TYPE     55     52     31     11
D29V9, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           11                             55
  CLUS_2                           14                             52
  CLUS_3                            4                             31
  CLUS_4                            0                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED        8      4     17
  AMP PEAK 29(19P13.2) WILD-TYPE     54     18     77
D29V10, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            8                             54
  CLUS_2                            4                             18
  CLUS_3                           17                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       29      9     16
  AMP PEAK 30(19Q12) WILD-TYPE     36     35     59
D30V1, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         29                           36
  CLUS_2                          9                           35
  CLUS_3                         16                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       28      9     17
  AMP PEAK 30(19Q12) WILD-TYPE     48     23     59
D30V2, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         28                           48
  CLUS_2                          9                           23
  CLUS_3                         17                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(19Q12) MUTATED       10      6      7     12      1
  AMP PEAK 30(19Q12) WILD-TYPE     16     22     23     22      7
D30V3, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         10                           16
  CLUS_2                          6                           22
  CLUS_3                          7                           23
  CLUS_4                         12                           22
  CLUS_5                          1                            7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(19Q12) MUTATED       10      4      4      9      9
  AMP PEAK 30(19Q12) WILD-TYPE     13     17     18     17     25
D30V4, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         10                           13
  CLUS_2                          4                           17
  CLUS_3                          4                           18
  CLUS_4                          9                           17
  CLUS_5                          9                           25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       29     15      6      4
  AMP PEAK 30(19Q12) WILD-TYPE     52     54     16      7
D30V5, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         29                           52
  CLUS_2                         15                           54
  CLUS_3                          6                           16
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       25      7     22
  AMP PEAK 30(19Q12) WILD-TYPE     42     13     74
D30V6, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         25                           42
  CLUS_2                          7                           13
  CLUS_3                         22                           74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       32     21      1
  AMP PEAK 30(19Q12) WILD-TYPE     52     66     11
D30V7, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         32                           52
  CLUS_2                         21                           66
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       23      9     15      7
  AMP PEAK 30(19Q12) WILD-TYPE     39     17     47     26
D30V8, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         23                           39
  CLUS_2                          9                           17
  CLUS_3                         15                           47
  CLUS_4                          7                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       26     14     11      2
  AMP PEAK 30(19Q12) WILD-TYPE     40     52     24      9
D30V9, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         26                           40
  CLUS_2                         14                           52
  CLUS_3                         11                           24
  CLUS_4                          2                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       25      7     21
  AMP PEAK 30(19Q12) WILD-TYPE     37     15     73
D30V10, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         25                           37
  CLUS_2                          7                           15
  CLUS_3                         21                           73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       23     11     35
  AMP PEAK 31(XQ28) WILD-TYPE     42     33     40
D31V1, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        23                          42
  CLUS_2                        11                          33
  CLUS_3                        35                          40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       22     10     37
  AMP PEAK 31(XQ28) WILD-TYPE     54     22     39
D31V2, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          54
  CLUS_2                        10                          22
  CLUS_3                        37                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(XQ28) MUTATED        8     10     10     19      3
  AMP PEAK 31(XQ28) WILD-TYPE     18     18     20     15      5
D31V3, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                         8                          18
  CLUS_2                        10                          18
  CLUS_3                        10                          20
  CLUS_4                        19                          15
  CLUS_5                         3                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(XQ28) MUTATED        9      7      6     13     15
  AMP PEAK 31(XQ28) WILD-TYPE     14     14     16     13     19
D31V4, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                         9                          14
  CLUS_2                         7                          14
  CLUS_3                         6                          16
  CLUS_4                        13                          13
  CLUS_5                        15                          19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(XQ28) MUTATED       24     34      6      5
  AMP PEAK 31(XQ28) WILD-TYPE     57     35     16      6
D31V5, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        24                          57
  CLUS_2                        34                          35
  CLUS_3                         6                          16
  CLUS_4                         5                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       18      6     45
  AMP PEAK 31(XQ28) WILD-TYPE     49     14     51
D31V6, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        18                          49
  CLUS_2                         6                          14
  CLUS_3                        45                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       24     41      3
  AMP PEAK 31(XQ28) WILD-TYPE     60     46      9
D31V7, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        24                          60
  CLUS_2                        41                          46
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(XQ28) MUTATED       22      2     29     15
  AMP PEAK 31(XQ28) WILD-TYPE     40     24     33     18
D31V8, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          40
  CLUS_2                         2                          24
  CLUS_3                        29                          33
  CLUS_4                        15                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(XQ28) MUTATED       23     30     10      4
  AMP PEAK 31(XQ28) WILD-TYPE     43     36     25      7
D31V9, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        23                          43
  CLUS_2                        30                          36
  CLUS_3                        10                          25
  CLUS_4                         4                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       22      2     43
  AMP PEAK 31(XQ28) WILD-TYPE     40     20     51
D31V10, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          40
  CLUS_2                         2                          20
  CLUS_3                        43                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       36     13     26
  DEL PEAK  1(1P36.11) WILD-TYPE     29     31     49
D32V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           36                             29
  CLUS_2                           13                             31
  CLUS_3                           26                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       41      9     25
  DEL PEAK  1(1P36.11) WILD-TYPE     35     23     51
D32V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           41                             35
  CLUS_2                            9                             23
  CLUS_3                           25                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       10     10      9     12      3
  DEL PEAK  1(1P36.11) WILD-TYPE     16     18     21     22      5
D32V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           10                             16
  CLUS_2                           10                             18
  CLUS_3                            9                             21
  CLUS_4                           12                             22
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED        8      9      8      8     11
  DEL PEAK  1(1P36.11) WILD-TYPE     15     12     14     18     23
D32V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            9                             12
  CLUS_3                            8                             14
  CLUS_4                            8                             18
  CLUS_5                           11                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       44     21      9      1
  DEL PEAK  1(1P36.11) WILD-TYPE     37     48     13     10
D32V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           44                             37
  CLUS_2                           21                             48
  CLUS_3                            9                             13
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       36      8     31
  DEL PEAK  1(1P36.11) WILD-TYPE     31     12     65
D32V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           36                             31
  CLUS_2                            8                             12
  CLUS_3                           31                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       44     30      1
  DEL PEAK  1(1P36.11) WILD-TYPE     40     57     11
D32V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           44                             40
  CLUS_2                           30                             57
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       33     11     24      7
  DEL PEAK  1(1P36.11) WILD-TYPE     29     15     38     26
D32V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           11                             15
  CLUS_3                           24                             38
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       36     25     10      3
  DEL PEAK  1(1P36.11) WILD-TYPE     30     41     25      8
D32V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           36                             30
  CLUS_2                           25                             41
  CLUS_3                           10                             25
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       33     10     31
  DEL PEAK  1(1P36.11) WILD-TYPE     29     12     63
D32V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           10                             12
  CLUS_3                           31                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  2(1P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       29      4     31
  DEL PEAK  2(1P13.2) WILD-TYPE     36     40     44
D33V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          29                            36
  CLUS_2                           4                            40
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       29      6     29
  DEL PEAK  2(1P13.2) WILD-TYPE     47     26     47
D33V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          29                            47
  CLUS_2                           6                            26
  CLUS_3                          29                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       12      7     10     14      2
  DEL PEAK  2(1P13.2) WILD-TYPE     14     21     20     20      6
D33V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          12                            14
  CLUS_2                           7                            21
  CLUS_3                          10                            20
  CLUS_4                          14                            20
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       10      6      7     12     10
  DEL PEAK  2(1P13.2) WILD-TYPE     13     15     15     14     24
D33V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                           6                            15
  CLUS_3                           7                            15
  CLUS_4                          12                            14
  CLUS_5                          10                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       30     27      6      1
  DEL PEAK  2(1P13.2) WILD-TYPE     51     42     16     10
D33V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          30                            51
  CLUS_2                          27                            42
  CLUS_3                           6                            16
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       22      9     33
  DEL PEAK  2(1P13.2) WILD-TYPE     45     11     63
D33V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          22                            45
  CLUS_2                           9                            11
  CLUS_3                          33                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       31     30      3
  DEL PEAK  2(1P13.2) WILD-TYPE     53     57      9
D33V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          31                            53
  CLUS_2                          30                            57
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       24      8     26      6
  DEL PEAK  2(1P13.2) WILD-TYPE     38     18     36     27
D33V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          24                            38
  CLUS_2                           8                            18
  CLUS_3                          26                            36
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       26     26     10      1
  DEL PEAK  2(1P13.2) WILD-TYPE     40     40     25     10
D33V9, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          26                            40
  CLUS_2                          26                            40
  CLUS_3                          10                            25
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       23      8     32
  DEL PEAK  2(1P13.2) WILD-TYPE     39     14     62
D33V10, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           8                            14
  CLUS_3                          32                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  3(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      3      8
  DEL PEAK  3(1Q44) WILD-TYPE     59     41     67
D34V1, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          59
  CLUS_2                         3                          41
  CLUS_3                         8                          67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      4      7
  DEL PEAK  3(1Q44) WILD-TYPE     70     28     69
D34V2, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          70
  CLUS_2                         4                          28
  CLUS_3                         7                          69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED        5      1      0      4      0
  DEL PEAK  3(1Q44) WILD-TYPE     21     27     30     30      8
D34V3, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          21
  CLUS_2                         1                          27
  CLUS_3                         0                          30
  CLUS_4                         4                          30
  CLUS_5                         0                           8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED        4      1      0      2      3
  DEL PEAK  3(1Q44) WILD-TYPE     19     20     22     24     31
D34V4, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         4                          19
  CLUS_2                         1                          20
  CLUS_3                         0                          22
  CLUS_4                         2                          24
  CLUS_5                         3                          31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        8      7      1      1
  DEL PEAK  3(1Q44) WILD-TYPE     73     62     21     10
D34V5, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         8                          73
  CLUS_2                         7                          62
  CLUS_3                         1                          21
  CLUS_4                         1                          10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      3      8
  DEL PEAK  3(1Q44) WILD-TYPE     61     17     88
D34V6, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          61
  CLUS_2                         3                          17
  CLUS_3                         8                          88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        9      8      0
  DEL PEAK  3(1Q44) WILD-TYPE     75     79     12
D34V7, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         9                          75
  CLUS_2                         8                          79
  CLUS_3                         0                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      4      6      2
  DEL PEAK  3(1Q44) WILD-TYPE     57     22     56     31
D34V8, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          57
  CLUS_2                         4                          22
  CLUS_3                         6                          56
  CLUS_4                         2                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      7      4      0
  DEL PEAK  3(1Q44) WILD-TYPE     61     59     31     11
D34V9, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          61
  CLUS_2                         7                          59
  CLUS_3                         4                          31
  CLUS_4                         0                          11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        4      4      8
  DEL PEAK  3(1Q44) WILD-TYPE     58     18     86
D34V10, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         4                          58
  CLUS_2                         4                          18
  CLUS_3                         8                          86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       11      8     40
  DEL PEAK  4(2Q22.1) WILD-TYPE     54     36     35
D35V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            54
  CLUS_2                           8                            36
  CLUS_3                          40                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       10      8     41
  DEL PEAK  4(2Q22.1) WILD-TYPE     66     24     35
D35V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            66
  CLUS_2                           8                            24
  CLUS_3                          41                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q22.1) MUTATED        6      8     10     18      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     20     20     20     16      6
D35V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           6                            20
  CLUS_2                           8                            20
  CLUS_3                          10                            20
  CLUS_4                          18                            16
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q22.1) MUTATED        3      7      4     10     20
  DEL PEAK  4(2Q22.1) WILD-TYPE     20     14     18     16     14
D35V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           3                            20
  CLUS_2                           7                            14
  CLUS_3                           4                            18
  CLUS_4                          10                            16
  CLUS_5                          20                            14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       11     34     12      1
  DEL PEAK  4(2Q22.1) WILD-TYPE     70     35     10     10
D35V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            70
  CLUS_2                          34                            35
  CLUS_3                          12                            10
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        6      6     46
  DEL PEAK  4(2Q22.1) WILD-TYPE     61     14     50
D35V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           6                            61
  CLUS_2                           6                            14
  CLUS_3                          46                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       12     45      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     72     42     10
D35V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          12                            72
  CLUS_2                          45                            42
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       10      3     26     20
  DEL PEAK  4(2Q22.1) WILD-TYPE     52     23     36     13
D35V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            52
  CLUS_2                           3                            23
  CLUS_3                          26                            36
  CLUS_4                          20                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       11     35     10      3
  DEL PEAK  4(2Q22.1) WILD-TYPE     55     31     25      8
D35V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          35                            31
  CLUS_3                          10                            25
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       10      3     46
  DEL PEAK  4(2Q22.1) WILD-TYPE     52     19     48
D35V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            52
  CLUS_2                           3                            19
  CLUS_3                          46                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  5(2Q33.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED       10      7     19
  DEL PEAK  5(2Q33.3) WILD-TYPE     55     37     56
D36V1, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                          10                            55
  CLUS_2                           7                            37
  CLUS_3                          19                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        9      7     20
  DEL PEAK  5(2Q33.3) WILD-TYPE     67     25     56
D36V2, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           9                            67
  CLUS_2                           7                            25
  CLUS_3                          20                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q33.3) MUTATED        2      5      6     11      3
  DEL PEAK  5(2Q33.3) WILD-TYPE     24     23     24     23      5
D36V3, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           2                            24
  CLUS_2                           5                            23
  CLUS_3                           6                            24
  CLUS_4                          11                            23
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q33.3) MUTATED        2      4      3      9      9
  DEL PEAK  5(2Q33.3) WILD-TYPE     21     17     19     17     25
D36V4, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           2                            21
  CLUS_2                           4                            17
  CLUS_3                           3                            19
  CLUS_4                           9                            17
  CLUS_5                           9                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED       10     18      7      1
  DEL PEAK  5(2Q33.3) WILD-TYPE     71     51     15     10
D36V5, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                          10                            71
  CLUS_2                          18                            51
  CLUS_3                           7                            15
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        7      3     26
  DEL PEAK  5(2Q33.3) WILD-TYPE     60     17     70
D36V6, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            60
  CLUS_2                           3                            17
  CLUS_3                          26                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        9     22      4
  DEL PEAK  5(2Q33.3) WILD-TYPE     75     65      8
D36V7, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           9                            75
  CLUS_2                          22                            65
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        7      3     15     10
  DEL PEAK  5(2Q33.3) WILD-TYPE     55     23     47     23
D36V8, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            55
  CLUS_2                           3                            23
  CLUS_3                          15                            47
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        7     16      7      4
  DEL PEAK  5(2Q33.3) WILD-TYPE     59     50     28      7
D36V9, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            59
  CLUS_2                          16                            50
  CLUS_3                           7                            28
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        6      3     25
  DEL PEAK  5(2Q33.3) WILD-TYPE     56     19     69
D36V10, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           6                            56
  CLUS_2                           3                            19
  CLUS_3                          25                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  6(3P26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       32     16     63
  DEL PEAK  6(3P26.2) WILD-TYPE     33     28     12
D37V1, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          32                            33
  CLUS_2                          16                            28
  CLUS_3                          63                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       33     18     60
  DEL PEAK  6(3P26.2) WILD-TYPE     43     14     16
D37V2, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          33                            43
  CLUS_2                          18                            14
  CLUS_3                          60                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P26.2) MUTATED       13     20     17     27      6
  DEL PEAK  6(3P26.2) WILD-TYPE     13      8     13      7      2
D37V3, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          13                            13
  CLUS_2                          20                             8
  CLUS_3                          17                            13
  CLUS_4                          27                             7
  CLUS_5                           6                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P26.2) MUTATED       11     15     11     21     25
  DEL PEAK  6(3P26.2) WILD-TYPE     12      6     11      5      9
D37V4, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                          15                             6
  CLUS_3                          11                            11
  CLUS_4                          21                             5
  CLUS_5                          25                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P26.2) MUTATED       38     55     11      6
  DEL PEAK  6(3P26.2) WILD-TYPE     43     14     11      5
D37V5, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          38                            43
  CLUS_2                          55                            14
  CLUS_3                          11                            11
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       27     11     72
  DEL PEAK  6(3P26.2) WILD-TYPE     40      9     24
D37V6, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          27                            40
  CLUS_2                          11                             9
  CLUS_3                          72                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       38     66      7
  DEL PEAK  6(3P26.2) WILD-TYPE     46     21      5
D37V7, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          38                            46
  CLUS_2                          66                            21
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P26.2) MUTATED       29     10     48     24
  DEL PEAK  6(3P26.2) WILD-TYPE     33     16     14      9
D37V8, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          29                            33
  CLUS_2                          10                            16
  CLUS_3                          48                            14
  CLUS_4                          24                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P26.2) MUTATED       32     50     21      7
  DEL PEAK  6(3P26.2) WILD-TYPE     34     16     14      4
D37V9, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          32                            34
  CLUS_2                          50                            16
  CLUS_3                          21                            14
  CLUS_4                           7                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       29     10     71
  DEL PEAK  6(3P26.2) WILD-TYPE     33     12     23
D37V10, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          29                            33
  CLUS_2                          10                            12
  CLUS_3                          71                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  7(3P14.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       37     18     71
  DEL PEAK  7(3P14.3) WILD-TYPE     28     26      4
D38V1, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          37                            28
  CLUS_2                          18                            26
  CLUS_3                          71                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       37     23     66
  DEL PEAK  7(3P14.3) WILD-TYPE     39      9     10
D38V2, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          37                            39
  CLUS_2                          23                             9
  CLUS_3                          66                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P14.3) MUTATED       16     20     20     31      6
  DEL PEAK  7(3P14.3) WILD-TYPE     10      8     10      3      2
D38V3, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          16                            10
  CLUS_2                          20                             8
  CLUS_3                          20                            10
  CLUS_4                          31                             3
  CLUS_5                           6                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P14.3) MUTATED       13     14     15     21     30
  DEL PEAK  7(3P14.3) WILD-TYPE     10      7      7      5      4
D38V4, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          13                            10
  CLUS_2                          14                             7
  CLUS_3                          15                             7
  CLUS_4                          21                             5
  CLUS_5                          30                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       43     62     14      6
  DEL PEAK  7(3P14.3) WILD-TYPE     38      7      8      5
D38V5, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          43                            38
  CLUS_2                          62                             7
  CLUS_3                          14                             8
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       32     11     82
  DEL PEAK  7(3P14.3) WILD-TYPE     35      9     14
D38V6, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            35
  CLUS_2                          11                             9
  CLUS_3                          82                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       43     76      7
  DEL PEAK  7(3P14.3) WILD-TYPE     41     11      5
D38V7, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          43                            41
  CLUS_2                          76                            11
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       32     12     54     28
  DEL PEAK  7(3P14.3) WILD-TYPE     30     14      8      5
D38V8, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            30
  CLUS_2                          12                            14
  CLUS_3                          54                             8
  CLUS_4                          28                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       32     59     25      8
  DEL PEAK  7(3P14.3) WILD-TYPE     34      7     10      3
D38V9, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            34
  CLUS_2                          59                             7
  CLUS_3                          25                            10
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       32     11     81
  DEL PEAK  7(3P14.3) WILD-TYPE     30     11     13
D38V10, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            30
  CLUS_2                          11                            11
  CLUS_3                          81                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  8(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       38     17     70
  DEL PEAK  8(3P14.2) WILD-TYPE     27     27      5
D39V1, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          38                            27
  CLUS_2                          17                            27
  CLUS_3                          70                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       38     22     65
  DEL PEAK  8(3P14.2) WILD-TYPE     38     10     11
D39V2, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          38                            38
  CLUS_2                          22                            10
  CLUS_3                          65                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P14.2) MUTATED       18     19     20     30      6
  DEL PEAK  8(3P14.2) WILD-TYPE      8      9     10      4      2
D39V3, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          18                             8
  CLUS_2                          19                             9
  CLUS_3                          20                            10
  CLUS_4                          30                             4
  CLUS_5                           6                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P14.2) MUTATED       14     13     16     20     30
  DEL PEAK  8(3P14.2) WILD-TYPE      9      8      6      6      4
D39V4, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          14                             9
  CLUS_2                          13                             8
  CLUS_3                          16                             6
  CLUS_4                          20                             6
  CLUS_5                          30                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       43     61     14      6
  DEL PEAK  8(3P14.2) WILD-TYPE     38      8      8      5
D39V5, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          43                            38
  CLUS_2                          61                             8
  CLUS_3                          14                             8
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       31     12     81
  DEL PEAK  8(3P14.2) WILD-TYPE     36      8     15
D39V6, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          31                            36
  CLUS_2                          12                             8
  CLUS_3                          81                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       43     75      7
  DEL PEAK  8(3P14.2) WILD-TYPE     41     12      5
D39V7, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          43                            41
  CLUS_2                          75                            12
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       33     11     53     28
  DEL PEAK  8(3P14.2) WILD-TYPE     29     15      9      5
D39V8, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          11                            15
  CLUS_3                          53                             9
  CLUS_4                          28                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       34     58     24      7
  DEL PEAK  8(3P14.2) WILD-TYPE     32      8     11      4
D39V9, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          34                            32
  CLUS_2                          58                             8
  CLUS_3                          24                            11
  CLUS_4                           7                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       33     10     80
  DEL PEAK  8(3P14.2) WILD-TYPE     29     12     14
D39V10, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          10                            12
  CLUS_3                          80                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  9(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       14      6     13
  DEL PEAK  9(3Q11.1) WILD-TYPE     51     38     62
D40V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          14                            51
  CLUS_2                           6                            38
  CLUS_3                          13                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       16      4     13
  DEL PEAK  9(3Q11.1) WILD-TYPE     60     28     63
D40V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          16                            60
  CLUS_2                           4                            28
  CLUS_3                          13                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3Q11.1) MUTATED        8      4      5      6      2
  DEL PEAK  9(3Q11.1) WILD-TYPE     18     24     25     28      6
D40V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           8                            18
  CLUS_2                           4                            24
  CLUS_3                           5                            25
  CLUS_4                           6                            28
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3Q11.1) MUTATED        5      3      4      7      6
  DEL PEAK  9(3Q11.1) WILD-TYPE     18     18     18     19     28
D40V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                           3                            18
  CLUS_3                           4                            18
  CLUS_4                           7                            19
  CLUS_5                           6                            28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       17     13      1      2
  DEL PEAK  9(3Q11.1) WILD-TYPE     64     56     21      9
D40V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          17                            64
  CLUS_2                          13                            56
  CLUS_3                           1                            21
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       13      4     16
  DEL PEAK  9(3Q11.1) WILD-TYPE     54     16     80
D40V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            54
  CLUS_2                           4                            16
  CLUS_3                          16                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       17     14      2
  DEL PEAK  9(3Q11.1) WILD-TYPE     67     73     10
D40V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          17                            67
  CLUS_2                          14                            73
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       13      5     11      4
  DEL PEAK  9(3Q11.1) WILD-TYPE     49     21     51     29
D40V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            49
  CLUS_2                           5                            21
  CLUS_3                          11                            51
  CLUS_4                           4                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       14     12      6      1
  DEL PEAK  9(3Q11.1) WILD-TYPE     52     54     29     10
D40V9, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          14                            52
  CLUS_2                          12                            54
  CLUS_3                           6                            29
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       13      5     15
  DEL PEAK  9(3Q11.1) WILD-TYPE     49     17     79
D40V10, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            49
  CLUS_2                           5                            17
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 10(3Q26.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       11      4      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     54     40     74
D41V1, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            4                             40
  CLUS_3                            1                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       15      0      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     61     32     75
D41V2, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           15                             61
  CLUS_2                            0                             32
  CLUS_3                            1                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3Q26.31) MUTATED        6      3      1      0      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     20     25     29     34      8
D41V3, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            6                             20
  CLUS_2                            3                             25
  CLUS_3                            1                             29
  CLUS_4                            0                             34
  CLUS_5                            0                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3Q26.31) MUTATED        4      3      3      0      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     19     18     19     26     34
D41V4, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            4                             19
  CLUS_2                            3                             18
  CLUS_3                            3                             19
  CLUS_4                            0                             26
  CLUS_5                            0                             34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED       13      1      1      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     68     68     21     10
D41V5, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           13                             68
  CLUS_2                            1                             68
  CLUS_3                            1                             21
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       12      3      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     55     17     95
D41V6, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           12                             55
  CLUS_2                            3                             17
  CLUS_3                            1                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       15      1      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     69     86     12
D41V7, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           15                             69
  CLUS_2                            1                             86
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED       11      4      0      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     51     22     62     32
D41V8, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             22
  CLUS_3                            0                             62
  CLUS_4                            1                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED       13      1      2      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     53     65     33     11
D41V9, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           13                             53
  CLUS_2                            1                             65
  CLUS_3                            2                             33
  CLUS_4                            0                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       11      4      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     51     18     93
D41V10, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             18
  CLUS_3                            1                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 11(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       42     16     48
  DEL PEAK 11(4P15.2) WILD-TYPE     23     28     27
D42V1, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          42                            23
  CLUS_2                          16                            28
  CLUS_3                          48                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       45     13     48
  DEL PEAK 11(4P15.2) WILD-TYPE     31     19     28
D42V2, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          45                            31
  CLUS_2                          13                            19
  CLUS_3                          48                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4P15.2) MUTATED       15     15     18     23      2
  DEL PEAK 11(4P15.2) WILD-TYPE     11     13     12     11      6
D42V3, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          15                            11
  CLUS_2                          15                            13
  CLUS_3                          18                            12
  CLUS_4                          23                            11
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4P15.2) MUTATED       13     12     14     16     18
  DEL PEAK 11(4P15.2) WILD-TYPE     10      9      8     10     16
D42V4, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          13                            10
  CLUS_2                          12                             9
  CLUS_3                          14                             8
  CLUS_4                          16                            10
  CLUS_5                          18                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       47     45     11      3
  DEL PEAK 11(4P15.2) WILD-TYPE     34     24     11      8
D42V5, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          47                            34
  CLUS_2                          45                            24
  CLUS_3                          11                            11
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       40      9     57
  DEL PEAK 11(4P15.2) WILD-TYPE     27     11     39
D42V6, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          40                            27
  CLUS_2                           9                            11
  CLUS_3                          57                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       48     55      3
  DEL PEAK 11(4P15.2) WILD-TYPE     36     32      9
D42V7, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          48                            36
  CLUS_2                          55                            32
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       37     13     38     18
  DEL PEAK 11(4P15.2) WILD-TYPE     25     13     24     15
D42V8, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          37                            25
  CLUS_2                          13                            13
  CLUS_3                          38                            24
  CLUS_4                          18                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       37     42     16      8
  DEL PEAK 11(4P15.2) WILD-TYPE     29     24     19      3
D42V9, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          37                            29
  CLUS_2                          42                            24
  CLUS_3                          16                            19
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       36     12     55
  DEL PEAK 11(4P15.2) WILD-TYPE     26     10     39
D42V10, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          36                            26
  CLUS_2                          12                            10
  CLUS_3                          55                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 12(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       49     16     40
  DEL PEAK 12(4Q22.1) WILD-TYPE     16     28     35
D43V1, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          16                            28
  CLUS_3                          40                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       50     15     40
  DEL PEAK 12(4Q22.1) WILD-TYPE     26     17     36
D43V2, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          50                            26
  CLUS_2                          15                            17
  CLUS_3                          40                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(4Q22.1) MUTATED       16     15     15     21      4
  DEL PEAK 12(4Q22.1) WILD-TYPE     10     13     15     13      4
D43V3, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          16                            10
  CLUS_2                          15                            13
  CLUS_3                          15                            15
  CLUS_4                          21                            13
  CLUS_5                           4                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(4Q22.1) MUTATED       14     13     12     13     19
  DEL PEAK 12(4Q22.1) WILD-TYPE      9      8     10     13     15
D43V4, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          14                             9
  CLUS_2                          13                             8
  CLUS_3                          12                            10
  CLUS_4                          13                            13
  CLUS_5                          19                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       55     39      9      2
  DEL PEAK 12(4Q22.1) WILD-TYPE     26     30     13      9
D43V5, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          55                            26
  CLUS_2                          39                            30
  CLUS_3                           9                            13
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       47     10     48
  DEL PEAK 12(4Q22.1) WILD-TYPE     20     10     48
D43V6, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          47                            20
  CLUS_2                          10                            10
  CLUS_3                          48                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       56     47      2
  DEL PEAK 12(4Q22.1) WILD-TYPE     28     40     10
D43V7, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          47                            40
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       42     16     30     17
  DEL PEAK 12(4Q22.1) WILD-TYPE     20     10     32     16
D43V8, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          42                            20
  CLUS_2                          16                            10
  CLUS_3                          30                            32
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       45     35     15      8
  DEL PEAK 12(4Q22.1) WILD-TYPE     21     31     20      3
D43V9, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          45                            21
  CLUS_2                          35                            31
  CLUS_3                          15                            20
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       43     14     46
  DEL PEAK 12(4Q22.1) WILD-TYPE     19      8     48
D43V10, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          43                            19
  CLUS_2                          14                             8
  CLUS_3                          46                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 13(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       47     16     36
  DEL PEAK 13(4Q34.3) WILD-TYPE     18     28     39
D44V1, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          47                            18
  CLUS_2                          16                            28
  CLUS_3                          36                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       51     12     36
  DEL PEAK 13(4Q34.3) WILD-TYPE     25     20     40
D44V2, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          51                            25
  CLUS_2                          12                            20
  CLUS_3                          36                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4Q34.3) MUTATED       17     11     14     20      3
  DEL PEAK 13(4Q34.3) WILD-TYPE      9     17     16     14      5
D44V3, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          17                             9
  CLUS_2                          11                            17
  CLUS_3                          14                            16
  CLUS_4                          20                            14
  CLUS_5                           3                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4Q34.3) MUTATED       13     10     13     12     17
  DEL PEAK 13(4Q34.3) WILD-TYPE     10     11      9     14     17
D44V4, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          13                            10
  CLUS_2                          10                            11
  CLUS_3                          13                             9
  CLUS_4                          12                            14
  CLUS_5                          17                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q34.3) MUTATED       55     32     10      2
  DEL PEAK 13(4Q34.3) WILD-TYPE     26     37     12      9
D44V5, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          55                            26
  CLUS_2                          32                            37
  CLUS_3                          10                            12
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       48      9     42
  DEL PEAK 13(4Q34.3) WILD-TYPE     19     11     54
D44V6, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          48                            19
  CLUS_2                           9                            11
  CLUS_3                          42                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       56     41      2
  DEL PEAK 13(4Q34.3) WILD-TYPE     28     46     10
D44V7, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          41                            46
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q34.3) MUTATED       44     14     30     11
  DEL PEAK 13(4Q34.3) WILD-TYPE     18     12     32     22
D44V8, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            18
  CLUS_2                          14                            12
  CLUS_3                          30                            32
  CLUS_4                          11                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q34.3) MUTATED       44     31     14      8
  DEL PEAK 13(4Q34.3) WILD-TYPE     22     35     21      3
D44V9, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            22
  CLUS_2                          31                            35
  CLUS_3                          14                            21
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       44     13     40
  DEL PEAK 13(4Q34.3) WILD-TYPE     18      9     54
D44V10, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            18
  CLUS_2                          13                             9
  CLUS_3                          40                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 14(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       49     17     46
  DEL PEAK 14(5Q12.1) WILD-TYPE     16     27     29
D45V1, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          17                            27
  CLUS_3                          46                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       53     10     49
  DEL PEAK 14(5Q12.1) WILD-TYPE     23     22     27
D45V2, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          53                            23
  CLUS_2                          10                            22
  CLUS_3                          49                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(5Q12.1) MUTATED       18     18     16     21      5
  DEL PEAK 14(5Q12.1) WILD-TYPE      8     10     14     13      3
D45V3, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          18                             8
  CLUS_2                          18                            10
  CLUS_3                          16                            14
  CLUS_4                          21                            13
  CLUS_5                           5                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(5Q12.1) MUTATED       14     16     12     15     21
  DEL PEAK 14(5Q12.1) WILD-TYPE      9      5     10     11     13
D45V4, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          14                             9
  CLUS_2                          16                             5
  CLUS_3                          12                            10
  CLUS_4                          15                            11
  CLUS_5                          21                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q12.1) MUTATED       53     42     13      4
  DEL PEAK 14(5Q12.1) WILD-TYPE     28     27      9      7
D45V5, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          53                            28
  CLUS_2                          42                            27
  CLUS_3                          13                             9
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       43     14     55
  DEL PEAK 14(5Q12.1) WILD-TYPE     24      6     41
D45V6, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          43                            24
  CLUS_2                          14                             6
  CLUS_3                          55                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       56     52      3
  DEL PEAK 14(5Q12.1) WILD-TYPE     28     35      9
D45V7, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          52                            35
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q12.1) MUTATED       46     12     32     21
  DEL PEAK 14(5Q12.1) WILD-TYPE     16     14     30     12
D45V8, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          46                            16
  CLUS_2                          12                            14
  CLUS_3                          32                            30
  CLUS_4                          21                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q12.1) MUTATED       44     41     19      5
  DEL PEAK 14(5Q12.1) WILD-TYPE     22     25     16      6
D45V9, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          44                            22
  CLUS_2                          41                            25
  CLUS_3                          19                            16
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       45     11     53
  DEL PEAK 14(5Q12.1) WILD-TYPE     17     11     41
D45V10, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          45                            17
  CLUS_2                          11                            11
  CLUS_3                          53                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       34     11     29
  DEL PEAK 15(6P25.3) WILD-TYPE     31     33     46
D46V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          34                            31
  CLUS_2                          11                            33
  CLUS_3                          29                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       38      7     29
  DEL PEAK 15(6P25.3) WILD-TYPE     38     25     47
D46V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          38                            38
  CLUS_2                           7                            25
  CLUS_3                          29                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(6P25.3) MUTATED       11      9     12     15      2
  DEL PEAK 15(6P25.3) WILD-TYPE     15     19     18     19      6
D46V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          11                            15
  CLUS_2                           9                            19
  CLUS_3                          12                            18
  CLUS_4                          15                            19
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(6P25.3) MUTATED       12      7      8     12     10
  DEL PEAK 15(6P25.3) WILD-TYPE     11     14     14     14     24
D46V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          12                            11
  CLUS_2                           7                            14
  CLUS_3                           8                            14
  CLUS_4                          12                            14
  CLUS_5                          10                            24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       38     28      4      4
  DEL PEAK 15(6P25.3) WILD-TYPE     43     41     18      7
D46V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          38                            43
  CLUS_2                          28                            41
  CLUS_3                           4                            18
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       30     10     34
  DEL PEAK 15(6P25.3) WILD-TYPE     37     10     62
D46V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          30                            37
  CLUS_2                          10                            10
  CLUS_3                          34                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       40     30      3
  DEL PEAK 15(6P25.3) WILD-TYPE     44     57      9
D46V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          40                            44
  CLUS_2                          30                            57
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       31     10     26      6
  DEL PEAK 15(6P25.3) WILD-TYPE     31     16     36     27
D46V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            31
  CLUS_2                          10                            16
  CLUS_3                          26                            36
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       31     21     15      5
  DEL PEAK 15(6P25.3) WILD-TYPE     35     45     20      6
D46V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            35
  CLUS_2                          21                            45
  CLUS_3                          15                            20
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       31     10     31
  DEL PEAK 15(6P25.3) WILD-TYPE     31     12     63
D46V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            31
  CLUS_2                          10                            12
  CLUS_3                          31                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 16(6Q16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       18      9     28
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     35     47
D47V1, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           9                            35
  CLUS_3                          28                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       22      7     26
  DEL PEAK 16(6Q16.3) WILD-TYPE     54     25     50
D47V2, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          22                            54
  CLUS_2                           7                            25
  CLUS_3                          26                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(6Q16.3) MUTATED        8      6      8     15      2
  DEL PEAK 16(6Q16.3) WILD-TYPE     18     22     22     19      6
D47V3, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                           8                            18
  CLUS_2                           6                            22
  CLUS_3                           8                            22
  CLUS_4                          15                            19
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(6Q16.3) MUTATED        8      5      5      7     14
  DEL PEAK 16(6Q16.3) WILD-TYPE     15     16     17     19     20
D47V4, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                           8                            15
  CLUS_2                           5                            16
  CLUS_3                           5                            17
  CLUS_4                           7                            19
  CLUS_5                          14                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q16.3) MUTATED       24     23      7      1
  DEL PEAK 16(6Q16.3) WILD-TYPE     57     46     15     10
D47V5, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          24                            57
  CLUS_2                          23                            46
  CLUS_3                           7                            15
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       20      4     31
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     16     65
D47V6, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          20                            47
  CLUS_2                           4                            16
  CLUS_3                          31                            65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       23     31      1
  DEL PEAK 16(6Q16.3) WILD-TYPE     61     56     11
D47V7, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          23                            61
  CLUS_2                          31                            56
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q16.3) MUTATED       15      9     22      9
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     17     40     24
D47V8, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            17
  CLUS_3                          22                            40
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q16.3) MUTATED       17     21     12      5
  DEL PEAK 16(6Q16.3) WILD-TYPE     49     45     23      6
D47V9, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          21                            45
  CLUS_3                          12                            23
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       15      9     31
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     13     63
D47V10, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            13
  CLUS_3                          31                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 17(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       16      9     25
  DEL PEAK 17(6Q26) WILD-TYPE     49     35     50
D48V1, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        16                          49
  CLUS_2                         9                          35
  CLUS_3                        25                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       20      8     22
  DEL PEAK 17(6Q26) WILD-TYPE     56     24     54
D48V2, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        20                          56
  CLUS_2                         8                          24
  CLUS_3                        22                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(6Q26) MUTATED        6      4      9     14      1
  DEL PEAK 17(6Q26) WILD-TYPE     20     24     21     20      7
D48V3, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                         6                          20
  CLUS_2                         4                          24
  CLUS_3                         9                          21
  CLUS_4                        14                          20
  CLUS_5                         1                           7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(6Q26) MUTATED        6      2      6      8     12
  DEL PEAK 17(6Q26) WILD-TYPE     17     19     16     18     22
D48V4, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                         6                          17
  CLUS_2                         2                          19
  CLUS_3                         6                          16
  CLUS_4                         8                          18
  CLUS_5                        12                          22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       22     21      6      1
  DEL PEAK 17(6Q26) WILD-TYPE     59     48     16     10
D48V5, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        22                          59
  CLUS_2                        21                          48
  CLUS_3                         6                          16
  CLUS_4                         1                          10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       20      2     28
  DEL PEAK 17(6Q26) WILD-TYPE     47     18     68
D48V6, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        20                          47
  CLUS_2                         2                          18
  CLUS_3                        28                          68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       21     28      1
  DEL PEAK 17(6Q26) WILD-TYPE     63     59     11
D48V7, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        21                          63
  CLUS_2                        28                          59
  CLUS_3                         1                          11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       14      8     19      9
  DEL PEAK 17(6Q26) WILD-TYPE     48     18     43     24
D48V8, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        14                          48
  CLUS_2                         8                          18
  CLUS_3                        19                          43
  CLUS_4                         9                          24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       15     20     10      3
  DEL PEAK 17(6Q26) WILD-TYPE     51     46     25      8
D48V9, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        15                          51
  CLUS_2                        20                          46
  CLUS_3                        10                          25
  CLUS_4                         3                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       13      8     27
  DEL PEAK 17(6Q26) WILD-TYPE     49     14     67
D48V10, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        13                          49
  CLUS_2                         8                          14
  CLUS_3                        27                          67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 18(7Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       25     11     20
  DEL PEAK 18(7Q31.1) WILD-TYPE     40     33     55
D49V1, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                          11                            33
  CLUS_3                          20                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       30      8     18
  DEL PEAK 18(7Q31.1) WILD-TYPE     46     24     58
D49V2, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          30                            46
  CLUS_2                           8                            24
  CLUS_3                          18                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(7Q31.1) MUTATED       12      8     10      6      2
  DEL PEAK 18(7Q31.1) WILD-TYPE     14     20     20     28      6
D49V3, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          12                            14
  CLUS_2                           8                            20
  CLUS_3                          10                            20
  CLUS_4                           6                            28
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(7Q31.1) MUTATED        9      7      7      6      9
  DEL PEAK 18(7Q31.1) WILD-TYPE     14     14     15     20     25
D49V4, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                           7                            14
  CLUS_3                           7                            15
  CLUS_4                           6                            20
  CLUS_5                           9                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q31.1) MUTATED       30     22      3      1
  DEL PEAK 18(7Q31.1) WILD-TYPE     51     47     19     10
D49V5, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          30                            51
  CLUS_2                          22                            47
  CLUS_3                           3                            19
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       24      6     26
  DEL PEAK 18(7Q31.1) WILD-TYPE     43     14     70
D49V6, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          24                            43
  CLUS_2                           6                            14
  CLUS_3                          26                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       30     23      3
  DEL PEAK 18(7Q31.1) WILD-TYPE     54     64      9
D49V7, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          30                            54
  CLUS_2                          23                            64
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q31.1) MUTATED       26      5     15     10
  DEL PEAK 18(7Q31.1) WILD-TYPE     36     21     47     23
D49V8, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          26                            36
  CLUS_2                           5                            21
  CLUS_3                          15                            47
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q31.1) MUTATED       27     14     11      3
  DEL PEAK 18(7Q31.1) WILD-TYPE     39     52     24      8
D49V9, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          27                            39
  CLUS_2                          14                            52
  CLUS_3                          11                            24
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       27      4     24
  DEL PEAK 18(7Q31.1) WILD-TYPE     35     18     70
D49V10, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          27                            35
  CLUS_2                           4                            18
  CLUS_3                          24                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 19(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       25     15     27
  DEL PEAK 19(7Q36.3) WILD-TYPE     40     29     48
D50V1, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                          15                            29
  CLUS_3                          27                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       30     12     25
  DEL PEAK 19(7Q36.3) WILD-TYPE     46     20     51
D50V2, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          30                            46
  CLUS_2                          12                            20
  CLUS_3                          25                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(7Q36.3) MUTATED       12     11     12     11      2
  DEL PEAK 19(7Q36.3) WILD-TYPE     14     17     18     23      6
D50V3, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          12                            14
  CLUS_2                          11                            17
  CLUS_3                          12                            18
  CLUS_4                          11                            23
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(7Q36.3) MUTATED        9      9     10      7     13
  DEL PEAK 19(7Q36.3) WILD-TYPE     14     12     12     19     21
D50V4, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                           9                            12
  CLUS_3                          10                            12
  CLUS_4                           7                            19
  CLUS_5                          13                            21
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       32     28      7      0
  DEL PEAK 19(7Q36.3) WILD-TYPE     49     41     15     11
D50V5, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          32                            49
  CLUS_2                          28                            41
  CLUS_3                           7                            15
  CLUS_4                           0                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       28      4     35
  DEL PEAK 19(7Q36.3) WILD-TYPE     39     16     61
D50V6, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          28                            39
  CLUS_2                           4                            16
  CLUS_3                          35                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       31     34      2
  DEL PEAK 19(7Q36.3) WILD-TYPE     53     53     10
D50V7, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          31                            53
  CLUS_2                          34                            53
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       27      6     19     15
  DEL PEAK 19(7Q36.3) WILD-TYPE     35     20     43     18
D50V8, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          27                            35
  CLUS_2                           6                            20
  CLUS_3                          19                            43
  CLUS_4                          15                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       28     24      9      5
  DEL PEAK 19(7Q36.3) WILD-TYPE     38     42     26      6
D50V9, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          28                            38
  CLUS_2                          24                            42
  CLUS_3                           9                            26
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       28      5     33
  DEL PEAK 19(7Q36.3) WILD-TYPE     34     17     61
D50V10, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          28                            34
  CLUS_2                           5                            17
  CLUS_3                          33                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 20(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       30     11     49
  DEL PEAK 20(8P23.2) WILD-TYPE     35     33     26
D51V1, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          30                            35
  CLUS_2                          11                            33
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       32     12     46
  DEL PEAK 20(8P23.2) WILD-TYPE     44     20     30
D51V2, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          32                            44
  CLUS_2                          12                            20
  CLUS_3                          46                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(8P23.2) MUTATED       13     12     17     19      2
  DEL PEAK 20(8P23.2) WILD-TYPE     13     16     13     15      6
D51V3, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          13                            13
  CLUS_2                          12                            16
  CLUS_3                          17                            13
  CLUS_4                          19                            15
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(8P23.2) MUTATED        5      8     14     14     22
  DEL PEAK 20(8P23.2) WILD-TYPE     18     13      8     12     12
D51V4, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                           8                            13
  CLUS_3                          14                             8
  CLUS_4                          14                            12
  CLUS_5                          22                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       31     41     11      6
  DEL PEAK 20(8P23.2) WILD-TYPE     50     28     11      5
D51V5, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          31                            50
  CLUS_2                          41                            28
  CLUS_3                          11                            11
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       27      7     55
  DEL PEAK 20(8P23.2) WILD-TYPE     40     13     41
D51V6, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          27                            40
  CLUS_2                           7                            13
  CLUS_3                          55                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       33     53      4
  DEL PEAK 20(8P23.2) WILD-TYPE     51     34      8
D51V7, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          33                            51
  CLUS_2                          53                            34
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       24     11     36     19
  DEL PEAK 20(8P23.2) WILD-TYPE     38     15     26     14
D51V8, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          24                            38
  CLUS_2                          11                            15
  CLUS_3                          36                            26
  CLUS_4                          19                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       25     41     15      5
  DEL PEAK 20(8P23.2) WILD-TYPE     41     25     20      6
D51V9, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          25                            41
  CLUS_2                          41                            25
  CLUS_3                          15                            20
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       25      9     52
  DEL PEAK 20(8P23.2) WILD-TYPE     37     13     42
D51V10, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           9                            13
  CLUS_3                          52                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 21(8P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       29      7     39
  DEL PEAK 21(8P12) WILD-TYPE     36     37     36
D52V1, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        29                          36
  CLUS_2                         7                          37
  CLUS_3                        39                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       31     10     34
  DEL PEAK 21(8P12) WILD-TYPE     45     22     42
D52V2, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        31                          45
  CLUS_2                        10                          22
  CLUS_3                        34                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(8P12) MUTATED       13     12     14     12      3
  DEL PEAK 21(8P12) WILD-TYPE     13     16     16     22      5
D52V3, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        13                          13
  CLUS_2                        12                          16
  CLUS_3                        14                          16
  CLUS_4                        12                          22
  CLUS_5                         3                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(8P12) MUTATED        6     10     11     12     15
  DEL PEAK 21(8P12) WILD-TYPE     17     11     11     14     19
D52V4, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                         6                          17
  CLUS_2                        10                          11
  CLUS_3                        11                          11
  CLUS_4                        12                          14
  CLUS_5                        15                          19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(8P12) MUTATED       31     30      9      4
  DEL PEAK 21(8P12) WILD-TYPE     50     39     13      7
D52V5, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        31                          50
  CLUS_2                        30                          39
  CLUS_3                         9                          13
  CLUS_4                         4                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       28      4     42
  DEL PEAK 21(8P12) WILD-TYPE     39     16     54
D52V6, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        28                          39
  CLUS_2                         4                          16
  CLUS_3                        42                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       31     41      3
  DEL PEAK 21(8P12) WILD-TYPE     53     46      9
D52V7, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        31                          53
  CLUS_2                        41                          46
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(8P12) MUTATED       24      9     27     15
  DEL PEAK 21(8P12) WILD-TYPE     38     17     35     18
D52V8, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        24                          38
  CLUS_2                         9                          17
  CLUS_3                        27                          35
  CLUS_4                        15                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(8P12) MUTATED       23     31     14      5
  DEL PEAK 21(8P12) WILD-TYPE     43     35     21      6
D52V9, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        23                          43
  CLUS_2                        31                          35
  CLUS_3                        14                          21
  CLUS_4                         5                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       24      7     42
  DEL PEAK 21(8P12) WILD-TYPE     38     15     52
D52V10, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        24                          38
  CLUS_2                         7                          15
  CLUS_3                        42                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 22(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       42     23     43
  DEL PEAK 22(9P23) WILD-TYPE     23     21     32
D53V1, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        42                          23
  CLUS_2                        23                          21
  CLUS_3                        43                          32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       48     22     38
  DEL PEAK 22(9P23) WILD-TYPE     28     10     38
D53V2, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        48                          28
  CLUS_2                        22                          10
  CLUS_3                        38                          38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(9P23) MUTATED       18     18     15     22      3
  DEL PEAK 22(9P23) WILD-TYPE      8     10     15     12      5
D53V3, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        18                           8
  CLUS_2                        18                          10
  CLUS_3                        15                          15
  CLUS_4                        22                          12
  CLUS_5                         3                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(9P23) MUTATED       15     13     12     18     18
  DEL PEAK 22(9P23) WILD-TYPE      8      8     10      8     16
D53V4, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        15                           8
  CLUS_2                        13                           8
  CLUS_3                        12                          10
  CLUS_4                        18                           8
  CLUS_5                        18                          16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P23) MUTATED       52     40     10      5
  DEL PEAK 22(9P23) WILD-TYPE     29     29     12      6
D53V5, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        52                          29
  CLUS_2                        40                          29
  CLUS_3                        10                          12
  CLUS_4                         5                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       46      7     54
  DEL PEAK 22(9P23) WILD-TYPE     21     13     42
D53V6, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        46                          21
  CLUS_2                         7                          13
  CLUS_3                        54                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       52     51      5
  DEL PEAK 22(9P23) WILD-TYPE     32     36      7
D53V7, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        52                          32
  CLUS_2                        51                          36
  CLUS_3                         5                           7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P23) MUTATED       38     16     33     21
  DEL PEAK 22(9P23) WILD-TYPE     24     10     29     12
D53V8, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        38                          24
  CLUS_2                        16                          10
  CLUS_3                        33                          29
  CLUS_4                        21                          12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P23) MUTATED       40     40     19      7
  DEL PEAK 22(9P23) WILD-TYPE     26     26     16      4
D53V9, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        40                          26
  CLUS_2                        40                          26
  CLUS_3                        19                          16
  CLUS_4                         7                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       39     14     53
  DEL PEAK 22(9P23) WILD-TYPE     23      8     41
D53V10, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        39                          23
  CLUS_2                        14                           8
  CLUS_3                        53                          41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 23(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       46     25     70
  DEL PEAK 23(9P21.3) WILD-TYPE     19     19      5
D54V1, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          46                            19
  CLUS_2                          25                            19
  CLUS_3                          70                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       55     23     63
  DEL PEAK 23(9P21.3) WILD-TYPE     21      9     13
D54V2, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          55                            21
  CLUS_2                          23                             9
  CLUS_3                          63                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(9P21.3) MUTATED       19     21     25     28      6
  DEL PEAK 23(9P21.3) WILD-TYPE      7      7      5      6      2
D54V3, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          19                             7
  CLUS_2                          21                             7
  CLUS_3                          25                             5
  CLUS_4                          28                             6
  CLUS_5                           6                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(9P21.3) MUTATED       14     16     18     23     28
  DEL PEAK 23(9P21.3) WILD-TYPE      9      5      4      3      6
D54V4, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          14                             9
  CLUS_2                          16                             5
  CLUS_3                          18                             4
  CLUS_4                          23                             3
  CLUS_5                          28                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       60     59     14      7
  DEL PEAK 23(9P21.3) WILD-TYPE     21     10      8      4
D54V5, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          60                            21
  CLUS_2                          59                            10
  CLUS_3                          14                             8
  CLUS_4                           7                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       49     11     80
  DEL PEAK 23(9P21.3) WILD-TYPE     18      9     16
D54V6, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          49                            18
  CLUS_2                          11                             9
  CLUS_3                          80                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       59     74      8
  DEL PEAK 23(9P21.3) WILD-TYPE     25     13      4
D54V7, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          59                            25
  CLUS_2                          74                            13
  CLUS_3                           8                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       42     19     53     27
  DEL PEAK 23(9P21.3) WILD-TYPE     20      7      9      6
D54V8, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          42                            20
  CLUS_2                          19                             7
  CLUS_3                          53                             9
  CLUS_4                          27                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       47     56     27      9
  DEL PEAK 23(9P21.3) WILD-TYPE     19     10      8      2
D54V9, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          47                            19
  CLUS_2                          56                            10
  CLUS_3                          27                             8
  CLUS_4                           9                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       43     17     79
  DEL PEAK 23(9P21.3) WILD-TYPE     19      5     15
D54V10, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          43                            19
  CLUS_2                          17                             5
  CLUS_3                          79                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 24(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       15      6     33
  DEL PEAK 24(10P15.3) WILD-TYPE     50     38     42
D55V1, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           15                             50
  CLUS_2                            6                             38
  CLUS_3                           33                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       14     13     27
  DEL PEAK 24(10P15.3) WILD-TYPE     62     19     49
D55V2, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           14                             62
  CLUS_2                           13                             19
  CLUS_3                           27                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(10P15.3) MUTATED        4      7     16     13      2
  DEL PEAK 24(10P15.3) WILD-TYPE     22     21     14     21      6
D55V3, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            4                             22
  CLUS_2                            7                             21
  CLUS_3                           16                             14
  CLUS_4                           13                             21
  CLUS_5                            2                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(10P15.3) MUTATED        4      6     10     12     10
  DEL PEAK 24(10P15.3) WILD-TYPE     19     15     12     14     24
D55V4, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            4                             19
  CLUS_2                            6                             15
  CLUS_3                           10                             12
  CLUS_4                           12                             14
  CLUS_5                           10                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       16     28      7      3
  DEL PEAK 24(10P15.3) WILD-TYPE     65     41     15      8
D55V5, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           16                             65
  CLUS_2                           28                             41
  CLUS_3                            7                             15
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       12      6     36
  DEL PEAK 24(10P15.3) WILD-TYPE     55     14     60
D55V6, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           12                             55
  CLUS_2                            6                             14
  CLUS_3                           36                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       18     35      1
  DEL PEAK 24(10P15.3) WILD-TYPE     66     52     11
D55V7, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           18                             66
  CLUS_2                           35                             52
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       12      7     28      7
  DEL PEAK 24(10P15.3) WILD-TYPE     50     19     34     26
D55V8, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             19
  CLUS_3                           28                             34
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       13     26     11      4
  DEL PEAK 24(10P15.3) WILD-TYPE     53     40     24      7
D55V9, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           13                             53
  CLUS_2                           26                             40
  CLUS_3                           11                             24
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       12      7     35
  DEL PEAK 24(10P15.3) WILD-TYPE     50     15     59
D55V10, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             15
  CLUS_3                           35                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 25(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        9      5     38
  DEL PEAK 25(10P11.21) WILD-TYPE     56     39     37
D56V1, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             9                              56
  CLUS_2                             5                              39
  CLUS_3                            38                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        9     10     33
  DEL PEAK 25(10P11.21) WILD-TYPE     67     22     43
D56V2, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             9                              67
  CLUS_2                            10                              22
  CLUS_3                            33                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(10P11.21) MUTATED        2      8     12     17      3
  DEL PEAK 25(10P11.21) WILD-TYPE     24     20     18     17      5
D56V3, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             2                              24
  CLUS_2                             8                              20
  CLUS_3                            12                              18
  CLUS_4                            17                              17
  CLUS_5                             3                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(10P11.21) MUTATED        2      7      7     13     13
  DEL PEAK 25(10P11.21) WILD-TYPE     21     14     15     13     21
D56V4, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             2                              21
  CLUS_2                             7                              14
  CLUS_3                             7                              15
  CLUS_4                            13                              13
  CLUS_5                            13                              21
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        9     29     10      3
  DEL PEAK 25(10P11.21) WILD-TYPE     72     40     12      8
D56V5, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             9                              72
  CLUS_2                            29                              40
  CLUS_3                            10                              12
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        7      3     41
  DEL PEAK 25(10P11.21) WILD-TYPE     60     17     55
D56V6, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                              60
  CLUS_2                             3                              17
  CLUS_3                            41                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED       10     40      1
  DEL PEAK 25(10P11.21) WILD-TYPE     74     47     11
D56V7, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                            10                              74
  CLUS_2                            40                              47
  CLUS_3                             1                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        7      3     27     14
  DEL PEAK 25(10P11.21) WILD-TYPE     55     23     35     19
D56V8, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                              55
  CLUS_2                             3                              23
  CLUS_3                            27                              35
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        8     29     10      4
  DEL PEAK 25(10P11.21) WILD-TYPE     58     37     25      7
D56V9, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             8                              58
  CLUS_2                            29                              37
  CLUS_3                            10                              25
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        7      3     41
  DEL PEAK 25(10P11.21) WILD-TYPE     55     19     53
D56V10, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                              55
  CLUS_2                             3                              19
  CLUS_3                            41                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 26(10Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       11      6     29
  DEL PEAK 26(10Q21.1) WILD-TYPE     54     38     46
D57V1, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            6                             38
  CLUS_3                           29                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       12      7     27
  DEL PEAK 26(10Q21.1) WILD-TYPE     64     25     49
D57V2, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           12                             64
  CLUS_2                            7                             25
  CLUS_3                           27                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(10Q21.1) MUTATED        5     10      8     13      1
  DEL PEAK 26(10Q21.1) WILD-TYPE     21     18     22     21      7
D57V3, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                            5                             21
  CLUS_2                           10                             18
  CLUS_3                            8                             22
  CLUS_4                           13                             21
  CLUS_5                            1                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(10Q21.1) MUTATED        5      5      4     10     13
  DEL PEAK 26(10Q21.1) WILD-TYPE     18     16     18     16     21
D57V4, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                            5                             16
  CLUS_3                            4                             18
  CLUS_4                           10                             16
  CLUS_5                           13                             21
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q21.1) MUTATED       13     22      8      3
  DEL PEAK 26(10Q21.1) WILD-TYPE     68     47     14      8
D57V5, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           13                             68
  CLUS_2                           22                             47
  CLUS_3                            8                             14
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       11      4     31
  DEL PEAK 26(10Q21.1) WILD-TYPE     56     16     65
D57V6, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           11                             56
  CLUS_2                            4                             16
  CLUS_3                           31                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       15     30      1
  DEL PEAK 26(10Q21.1) WILD-TYPE     69     57     11
D57V7, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           15                             69
  CLUS_2                           30                             57
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q21.1) MUTATED       11      4     23      8
  DEL PEAK 26(10Q21.1) WILD-TYPE     51     22     39     25
D57V8, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             22
  CLUS_3                           23                             39
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q21.1) MUTATED       12     21      8      4
  DEL PEAK 26(10Q21.1) WILD-TYPE     54     45     27      7
D57V9, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           12                             54
  CLUS_2                           21                             45
  CLUS_3                            8                             27
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       10      4     31
  DEL PEAK 26(10Q21.1) WILD-TYPE     52     18     63
D57V10, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           10                             52
  CLUS_2                            4                             18
  CLUS_3                           31                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 27(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       22      9     34
  DEL PEAK 27(10Q23.31) WILD-TYPE     43     35     41
D58V1, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            22                              43
  CLUS_2                             9                              35
  CLUS_3                            34                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       20     10     35
  DEL PEAK 27(10Q23.31) WILD-TYPE     56     22     41
D58V2, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            20                              56
  CLUS_2                            10                              22
  CLUS_3                            35                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10Q23.31) MUTATED       12     11      9     17      2
  DEL PEAK 27(10Q23.31) WILD-TYPE     14     17     21     17      6
D58V3, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            12                              14
  CLUS_2                            11                              17
  CLUS_3                             9                              21
  CLUS_4                            17                              17
  CLUS_5                             2                               6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10Q23.31) MUTATED        9      7      5     10     20
  DEL PEAK 27(10Q23.31) WILD-TYPE     14     14     17     16     14
D58V4, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                             9                              14
  CLUS_2                             7                              14
  CLUS_3                             5                              17
  CLUS_4                            10                              16
  CLUS_5                            20                              14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       24     27     10      4
  DEL PEAK 27(10Q23.31) WILD-TYPE     57     42     12      7
D58V5, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            24                              57
  CLUS_2                            27                              42
  CLUS_3                            10                              12
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       21      5     39
  DEL PEAK 27(10Q23.31) WILD-TYPE     46     15     57
D58V6, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            21                              46
  CLUS_2                             5                              15
  CLUS_3                            39                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       26     37      2
  DEL PEAK 27(10Q23.31) WILD-TYPE     58     50     10
D58V7, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            26                              58
  CLUS_2                            37                              50
  CLUS_3                             2                              10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       20      7     28     10
  DEL PEAK 27(10Q23.31) WILD-TYPE     42     19     34     23
D58V8, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             7                              19
  CLUS_3                            28                              34
  CLUS_4                            10                              23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       22     29     10      3
  DEL PEAK 27(10Q23.31) WILD-TYPE     44     37     25      8
D58V9, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            22                              44
  CLUS_2                            29                              37
  CLUS_3                            10                              25
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       19      7     38
  DEL PEAK 27(10Q23.31) WILD-TYPE     43     15     56
D58V10, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             7                              15
  CLUS_3                            38                              56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 28(11P15.4) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       27     14     38
  DEL PEAK 28(11P15.4) WILD-TYPE     38     30     37
D59V1, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           27                             38
  CLUS_2                           14                             30
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       30      9     40
  DEL PEAK 28(11P15.4) WILD-TYPE     46     23     36
D59V2, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           30                             46
  CLUS_2                            9                             23
  CLUS_3                           40                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(11P15.4) MUTATED       12     10     13     17      5
  DEL PEAK 28(11P15.4) WILD-TYPE     14     18     17     17      3
D59V3, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                           10                             18
  CLUS_3                           13                             17
  CLUS_4                           17                             17
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(11P15.4) MUTATED       11      7      8     12     19
  DEL PEAK 28(11P15.4) WILD-TYPE     12     14     14     14     15
D59V4, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                            7                             14
  CLUS_3                            8                             14
  CLUS_4                           12                             14
  CLUS_5                           19                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       33     34     10      2
  DEL PEAK 28(11P15.4) WILD-TYPE     48     35     12      9
D59V5, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           33                             48
  CLUS_2                           34                             35
  CLUS_3                           10                             12
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       28      6     45
  DEL PEAK 28(11P15.4) WILD-TYPE     39     14     51
D59V6, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           28                             39
  CLUS_2                            6                             14
  CLUS_3                           45                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       33     40      6
  DEL PEAK 28(11P15.4) WILD-TYPE     51     47      6
D59V7, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           33                             51
  CLUS_2                           40                             47
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       23     12     33     11
  DEL PEAK 28(11P15.4) WILD-TYPE     39     14     29     22
D59V8, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           23                             39
  CLUS_2                           12                             14
  CLUS_3                           33                             29
  CLUS_4                           11                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       26     31     16      4
  DEL PEAK 28(11P15.4) WILD-TYPE     40     35     19      7
D59V9, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           26                             40
  CLUS_2                           31                             35
  CLUS_3                           16                             19
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       23     11     43
  DEL PEAK 28(11P15.4) WILD-TYPE     39     11     51
D59V10, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           23                             39
  CLUS_2                           11                             11
  CLUS_3                           43                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 29(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       24      9     48
  DEL PEAK 29(11Q25) WILD-TYPE     41     35     27
D60V1, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         24                           41
  CLUS_2                          9                           35
  CLUS_3                         48                           27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       29     10     42
  DEL PEAK 29(11Q25) WILD-TYPE     47     22     34
D60V2, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         29                           47
  CLUS_2                         10                           22
  CLUS_3                         42                           34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(11Q25) MUTATED        8     14     16     16      3
  DEL PEAK 29(11Q25) WILD-TYPE     18     14     14     18      5
D60V3, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                          8                           18
  CLUS_2                         14                           14
  CLUS_3                         16                           14
  CLUS_4                         16                           18
  CLUS_5                          3                            5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(11Q25) MUTATED        6      9     10     13     19
  DEL PEAK 29(11Q25) WILD-TYPE     17     12     12     13     15
D60V4, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                          6                           17
  CLUS_2                          9                           12
  CLUS_3                         10                           12
  CLUS_4                         13                           13
  CLUS_5                         19                           15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       29     37     10      4
  DEL PEAK 29(11Q25) WILD-TYPE     52     32     12      7
D60V5, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         29                           52
  CLUS_2                         37                           32
  CLUS_3                         10                           12
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       22      8     50
  DEL PEAK 29(11Q25) WILD-TYPE     45     12     46
D60V6, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         22                           45
  CLUS_2                          8                           12
  CLUS_3                         50                           46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       30     46      4
  DEL PEAK 29(11Q25) WILD-TYPE     54     41      8
D60V7, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         30                           54
  CLUS_2                         46                           41
  CLUS_3                          4                            8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       20     10     33     17
  DEL PEAK 29(11Q25) WILD-TYPE     42     16     29     16
D60V8, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         20                           42
  CLUS_2                         10                           16
  CLUS_3                         33                           29
  CLUS_4                         17                           16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       23     37     16      2
  DEL PEAK 29(11Q25) WILD-TYPE     43     29     19      9
D60V9, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         23                           43
  CLUS_2                         37                           29
  CLUS_3                         16                           19
  CLUS_4                          2                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       19     10     49
  DEL PEAK 29(11Q25) WILD-TYPE     43     12     45
D60V10, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         19                           43
  CLUS_2                         10                           12
  CLUS_3                         49                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 30(12Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       22     13     16
  DEL PEAK 30(12Q23.1) WILD-TYPE     43     31     59
D61V1, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           22                             43
  CLUS_2                           13                             31
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       28     10     13
  DEL PEAK 30(12Q23.1) WILD-TYPE     48     22     63
D61V2, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           28                             48
  CLUS_2                           10                             22
  CLUS_3                           13                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(12Q23.1) MUTATED       12      6      9      8      1
  DEL PEAK 30(12Q23.1) WILD-TYPE     14     22     21     26      7
D61V3, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                            6                             22
  CLUS_3                            9                             21
  CLUS_4                            8                             26
  CLUS_5                            1                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(12Q23.1) MUTATED       10      5      8      6      7
  DEL PEAK 30(12Q23.1) WILD-TYPE     13     16     14     20     27
D61V4, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            5                             16
  CLUS_3                            8                             14
  CLUS_4                            6                             20
  CLUS_5                            7                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q23.1) MUTATED       31     14      4      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     50     55     18      9
D61V5, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           31                             50
  CLUS_2                           14                             55
  CLUS_3                            4                             18
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       23      8     20
  DEL PEAK 30(12Q23.1) WILD-TYPE     44     12     76
D61V6, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           23                             44
  CLUS_2                            8                             12
  CLUS_3                           20                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       30     19      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     54     68     10
D61V7, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           30                             54
  CLUS_2                           19                             68
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q23.1) MUTATED       20     11     14      6
  DEL PEAK 30(12Q23.1) WILD-TYPE     42     15     48     27
D61V8, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           11                             15
  CLUS_3                           14                             48
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q23.1) MUTATED       25     16      7      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     41     50     28      9
D61V9, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           25                             41
  CLUS_2                           16                             50
  CLUS_3                            7                             28
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       20     10     20
  DEL PEAK 30(12Q23.1) WILD-TYPE     42     12     74
D61V10, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             12
  CLUS_3                           20                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 31(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       24      9     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     41     35     32
D62V1, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            24                              41
  CLUS_2                             9                              35
  CLUS_3                            43                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       24     11     41
  DEL PEAK 31(13Q12.11) WILD-TYPE     52     21     35
D62V2, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            24                              52
  CLUS_2                            11                              21
  CLUS_3                            41                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(13Q12.11) MUTATED       11      7     15     18      3
  DEL PEAK 31(13Q12.11) WILD-TYPE     15     21     15     16      5
D62V3, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            11                              15
  CLUS_2                             7                              21
  CLUS_3                            15                              15
  CLUS_4                            18                              16
  CLUS_5                             3                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(13Q12.11) MUTATED        7      5      9     17     16
  DEL PEAK 31(13Q12.11) WILD-TYPE     16     16     13      9     18
D62V4, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                             7                              16
  CLUS_2                             5                              16
  CLUS_3                             9                              13
  CLUS_4                            17                               9
  CLUS_5                            16                              18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       25     40      6      4
  DEL PEAK 31(13Q12.11) WILD-TYPE     56     29     16      7
D62V5, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            25                              56
  CLUS_2                            40                              29
  CLUS_3                             6                              16
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       23      3     49
  DEL PEAK 31(13Q12.11) WILD-TYPE     44     17     47
D62V6, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            23                              44
  CLUS_2                             3                              17
  CLUS_3                            49                              47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       25     46      5
  DEL PEAK 31(13Q12.11) WILD-TYPE     59     41      7
D62V7, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            25                              59
  CLUS_2                            46                              41
  CLUS_3                             5                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       19      7     30     20
  DEL PEAK 31(13Q12.11) WILD-TYPE     43     19     32     13
D62V8, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             7                              19
  CLUS_3                            30                              32
  CLUS_4                            20                              13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       20     37     11      5
  DEL PEAK 31(13Q12.11) WILD-TYPE     46     29     24      6
D62V9, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            20                              46
  CLUS_2                            37                              29
  CLUS_3                            11                              24
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       18      7     48
  DEL PEAK 31(13Q12.11) WILD-TYPE     44     15     46
D62V10, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            18                              44
  CLUS_2                             7                              15
  CLUS_3                            48                              46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       23     10     41
  DEL PEAK 32(13Q14.2) WILD-TYPE     42     34     34
D63V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           23                             42
  CLUS_2                           10                             34
  CLUS_3                           41                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       25      8     41
  DEL PEAK 32(13Q14.2) WILD-TYPE     51     24     35
D63V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           25                             51
  CLUS_2                            8                             24
  CLUS_3                           41                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(13Q14.2) MUTATED       11     10     11     20      3
  DEL PEAK 32(13Q14.2) WILD-TYPE     15     18     19     14      5
D63V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           11                             15
  CLUS_2                           10                             18
  CLUS_3                           11                             19
  CLUS_4                           20                             14
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(13Q14.2) MUTATED        8      8      7     17     15
  DEL PEAK 32(13Q14.2) WILD-TYPE     15     13     15      9     19
D63V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            8                             13
  CLUS_3                            7                             15
  CLUS_4                           17                              9
  CLUS_5                           15                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       25     38      7      4
  DEL PEAK 32(13Q14.2) WILD-TYPE     56     31     15      7
D63V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           25                             56
  CLUS_2                           38                             31
  CLUS_3                            7                             15
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       21      5     48
  DEL PEAK 32(13Q14.2) WILD-TYPE     46     15     48
D63V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           21                             46
  CLUS_2                            5                             15
  CLUS_3                           48                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       25     44      4
  DEL PEAK 32(13Q14.2) WILD-TYPE     59     43      8
D63V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           25                             59
  CLUS_2                           44                             43
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       21      5     31     16
  DEL PEAK 32(13Q14.2) WILD-TYPE     41     21     31     17
D63V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           21                             41
  CLUS_2                            5                             21
  CLUS_3                           31                             31
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       21     36     10      4
  DEL PEAK 32(13Q14.2) WILD-TYPE     45     30     25      7
D63V9, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           21                             45
  CLUS_2                           36                             30
  CLUS_3                           10                             25
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       20      5     46
  DEL PEAK 32(13Q14.2) WILD-TYPE     42     17     48
D63V10, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                            5                             17
  CLUS_3                           46                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 33(13Q21.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       22     10     37
  DEL PEAK 33(13Q21.31) WILD-TYPE     43     34     38
D64V1, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            22                              43
  CLUS_2                            10                              34
  CLUS_3                            37                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       25      8     36
  DEL PEAK 33(13Q21.31) WILD-TYPE     51     24     40
D64V2, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            25                              51
  CLUS_2                             8                              24
  CLUS_3                            36                              40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(13Q21.31) MUTATED       12      9     10     16      3
  DEL PEAK 33(13Q21.31) WILD-TYPE     14     19     20     18      5
D64V3, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            12                              14
  CLUS_2                             9                              19
  CLUS_3                            10                              20
  CLUS_4                            16                              18
  CLUS_5                             3                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(13Q21.31) MUTATED        8      7      7     13     15
  DEL PEAK 33(13Q21.31) WILD-TYPE     15     14     15     13     19
D64V4, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                             8                              15
  CLUS_2                             7                              14
  CLUS_3                             7                              15
  CLUS_4                            13                              13
  CLUS_5                            15                              19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.31) MUTATED       25     33      7      4
  DEL PEAK 33(13Q21.31) WILD-TYPE     56     36     15      7
D64V5, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            25                              56
  CLUS_2                            33                              36
  CLUS_3                             7                              15
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       21      5     43
  DEL PEAK 33(13Q21.31) WILD-TYPE     46     15     53
D64V6, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            21                              46
  CLUS_2                             5                              15
  CLUS_3                            43                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       25     40      4
  DEL PEAK 33(13Q21.31) WILD-TYPE     59     47      8
D64V7, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            25                              59
  CLUS_2                            40                              47
  CLUS_3                             4                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.31) MUTATED       20      6     29     14
  DEL PEAK 33(13Q21.31) WILD-TYPE     42     20     33     19
D64V8, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             6                              20
  CLUS_3                            29                              33
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.31) MUTATED       19     32     11      5
  DEL PEAK 33(13Q21.31) WILD-TYPE     47     34     24      6
D64V9, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            19                              47
  CLUS_2                            32                              34
  CLUS_3                            11                              24
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       19      6     42
  DEL PEAK 33(13Q21.31) WILD-TYPE     43     16     52
D64V10, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             6                              16
  CLUS_3                            42                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 34(14Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       28      8     15
  DEL PEAK 34(14Q23.3) WILD-TYPE     37     36     60
D65V1, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           28                             37
  CLUS_2                            8                             36
  CLUS_3                           15                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       29      9     13
  DEL PEAK 34(14Q23.3) WILD-TYPE     47     23     63
D65V2, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           29                             47
  CLUS_2                            9                             23
  CLUS_3                           13                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(14Q23.3) MUTATED        9     12      8      4      1
  DEL PEAK 34(14Q23.3) WILD-TYPE     17     16     22     30      7
D65V3, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                            9                             17
  CLUS_2                           12                             16
  CLUS_3                            8                             22
  CLUS_4                            4                             30
  CLUS_5                            1                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(14Q23.3) MUTATED        6     11      7      6      4
  DEL PEAK 34(14Q23.3) WILD-TYPE     17     10     15     20     30
D65V4, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                           11                             10
  CLUS_3                            7                             15
  CLUS_4                            6                             20
  CLUS_5                            4                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q23.3) MUTATED       31     17      1      2
  DEL PEAK 34(14Q23.3) WILD-TYPE     50     52     21      9
D65V5, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           31                             50
  CLUS_2                           17                             52
  CLUS_3                            1                             21
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       26      5     20
  DEL PEAK 34(14Q23.3) WILD-TYPE     41     15     76
D65V6, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           26                             41
  CLUS_2                            5                             15
  CLUS_3                           20                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       30     18      3
  DEL PEAK 34(14Q23.3) WILD-TYPE     54     69      9
D65V7, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           30                             54
  CLUS_2                           18                             69
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q23.3) MUTATED       27      5     13      6
  DEL PEAK 34(14Q23.3) WILD-TYPE     35     21     49     27
D65V8, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           27                             35
  CLUS_2                            5                             21
  CLUS_3                           13                             49
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q23.3) MUTATED       27     16      5      3
  DEL PEAK 34(14Q23.3) WILD-TYPE     39     50     30      8
D65V9, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           16                             50
  CLUS_3                            5                             30
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       28      4     19
  DEL PEAK 34(14Q23.3) WILD-TYPE     34     18     75
D65V10, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            4                             18
  CLUS_3                           19                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 35(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       26     12     25
  DEL PEAK 35(15Q11.2) WILD-TYPE     39     32     50
D66V1, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           26                             39
  CLUS_2                           12                             32
  CLUS_3                           25                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       32      8     23
  DEL PEAK 35(15Q11.2) WILD-TYPE     44     24     53
D66V2, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           32                             44
  CLUS_2                            8                             24
  CLUS_3                           23                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(15Q11.2) MUTATED       10      8     12     10      2
  DEL PEAK 35(15Q11.2) WILD-TYPE     16     20     18     24      6
D66V3, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           10                             16
  CLUS_2                            8                             20
  CLUS_3                           12                             18
  CLUS_4                           10                             24
  CLUS_5                            2                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(15Q11.2) MUTATED        7      7     11      6     11
  DEL PEAK 35(15Q11.2) WILD-TYPE     16     14     11     20     23
D66V4, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                            7                             14
  CLUS_3                           11                             11
  CLUS_4                            6                             20
  CLUS_5                           11                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       33     22      4      4
  DEL PEAK 35(15Q11.2) WILD-TYPE     48     47     18      7
D66V5, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           33                             48
  CLUS_2                           22                             47
  CLUS_3                            4                             18
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       28      7     28
  DEL PEAK 35(15Q11.2) WILD-TYPE     39     13     68
D66V6, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           28                             39
  CLUS_2                            7                             13
  CLUS_3                           28                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       34     27      2
  DEL PEAK 35(15Q11.2) WILD-TYPE     50     60     10
D66V7, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           34                             50
  CLUS_2                           27                             60
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       19     16     20      8
  DEL PEAK 35(15Q11.2) WILD-TYPE     43     10     42     25
D66V8, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           19                             43
  CLUS_2                           16                             10
  CLUS_3                           20                             42
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       27     22     10      4
  DEL PEAK 35(15Q11.2) WILD-TYPE     39     44     25      7
D66V9, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           22                             44
  CLUS_3                           10                             25
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       20     15     28
  DEL PEAK 35(15Q11.2) WILD-TYPE     42      7     66
D66V10, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           15                              7
  CLUS_3                           28                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 36(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       39     10     16
  DEL PEAK 36(16P13.3) WILD-TYPE     26     34     59
D67V1, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           39                             26
  CLUS_2                           10                             34
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       41      8     16
  DEL PEAK 36(16P13.3) WILD-TYPE     35     24     60
D67V2, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           41                             35
  CLUS_2                            8                             24
  CLUS_3                           16                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(16P13.3) MUTATED       12      7      8      8      2
  DEL PEAK 36(16P13.3) WILD-TYPE     14     21     22     26      6
D67V3, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           12                             14
  CLUS_2                            7                             21
  CLUS_3                            8                             22
  CLUS_4                            8                             26
  CLUS_5                            2                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(16P13.3) MUTATED       11      6      6      7      7
  DEL PEAK 36(16P13.3) WILD-TYPE     12     15     16     19     27
D67V4, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                            6                             15
  CLUS_3                            6                             16
  CLUS_4                            7                             19
  CLUS_5                            7                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       42     15      6      2
  DEL PEAK 36(16P13.3) WILD-TYPE     39     54     16      9
D67V5, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           42                             39
  CLUS_2                           15                             54
  CLUS_3                            6                             16
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       34     11     20
  DEL PEAK 36(16P13.3) WILD-TYPE     33      9     76
D67V6, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           34                             33
  CLUS_2                           11                              9
  CLUS_3                           20                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       44     18      2
  DEL PEAK 36(16P13.3) WILD-TYPE     40     69     10
D67V7, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           44                             40
  CLUS_2                           18                             69
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       37      9     14      4
  DEL PEAK 36(16P13.3) WILD-TYPE     25     17     48     29
D67V8, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           37                             25
  CLUS_2                            9                             17
  CLUS_3                           14                             48
  CLUS_4                            4                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       38     13      9      3
  DEL PEAK 36(16P13.3) WILD-TYPE     28     53     26      8
D67V9, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           38                             28
  CLUS_2                           13                             53
  CLUS_3                            9                             26
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       36      9     18
  DEL PEAK 36(16P13.3) WILD-TYPE     26     13     76
D67V10, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           36                             26
  CLUS_2                            9                             13
  CLUS_3                           18                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 37(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       50     18     16
  DEL PEAK 37(16Q23.1) WILD-TYPE     15     26     59
D68V1, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           50                             15
  CLUS_2                           18                             26
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       56     11     17
  DEL PEAK 37(16Q23.1) WILD-TYPE     20     21     59
D68V2, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           56                             20
  CLUS_2                           11                             21
  CLUS_3                           17                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(16Q23.1) MUTATED       15     14     11      8      3
  DEL PEAK 37(16Q23.1) WILD-TYPE     11     14     19     26      5
D68V3, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           15                             11
  CLUS_2                           14                             14
  CLUS_3                           11                             19
  CLUS_4                            8                             26
  CLUS_5                            3                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(16Q23.1) MUTATED       11     13     11      7      9
  DEL PEAK 37(16Q23.1) WILD-TYPE     12      8     11     19     25
D68V4, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                           13                              8
  CLUS_3                           11                             11
  CLUS_4                            7                             19
  CLUS_5                            9                             25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       57     18      7      2
  DEL PEAK 37(16Q23.1) WILD-TYPE     24     51     15      9
D68V5, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           57                             24
  CLUS_2                           18                             51
  CLUS_3                            7                             15
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       49     12     23
  DEL PEAK 37(16Q23.1) WILD-TYPE     18      8     73
D68V6, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           49                             18
  CLUS_2                           12                              8
  CLUS_3                           23                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       60     22      1
  DEL PEAK 37(16Q23.1) WILD-TYPE     24     65     11
D68V7, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           60                             24
  CLUS_2                           22                             65
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       46     16     14      7
  DEL PEAK 37(16Q23.1) WILD-TYPE     16     10     48     26
D68V8, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           46                             16
  CLUS_2                           16                             10
  CLUS_3                           14                             48
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       49     17     11      4
  DEL PEAK 37(16Q23.1) WILD-TYPE     17     49     24      7
D68V9, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           49                             17
  CLUS_2                           17                             49
  CLUS_3                           11                             24
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       46     14     21
  DEL PEAK 37(16Q23.1) WILD-TYPE     16      8     73
D68V10, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           46                             16
  CLUS_2                           14                              8
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 38(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       44     19     23
  DEL PEAK 38(17P12) WILD-TYPE     21     25     52
D69V1, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         44                           21
  CLUS_2                         19                           25
  CLUS_3                         23                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       54     10     22
  DEL PEAK 38(17P12) WILD-TYPE     22     22     54
D69V2, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         54                           22
  CLUS_2                         10                           22
  CLUS_3                         22                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(17P12) MUTATED       14     10     14     10      6
  DEL PEAK 38(17P12) WILD-TYPE     12     18     16     24      2
D69V3, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         14                           12
  CLUS_2                         10                           18
  CLUS_3                         14                           16
  CLUS_4                         10                           24
  CLUS_5                          6                            2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(17P12) MUTATED       12      9     13      9     11
  DEL PEAK 38(17P12) WILD-TYPE     11     12      9     17     23
D69V4, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         12                           11
  CLUS_2                          9                           12
  CLUS_3                         13                            9
  CLUS_4                          9                           17
  CLUS_5                         11                           23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17P12) MUTATED       55     21      7      3
  DEL PEAK 38(17P12) WILD-TYPE     26     48     15      8
D69V5, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         55                           26
  CLUS_2                         21                           48
  CLUS_3                          7                           15
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       46     11     29
  DEL PEAK 38(17P12) WILD-TYPE     21      9     67
D69V6, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         46                           21
  CLUS_2                         11                            9
  CLUS_3                         29                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       56     29      1
  DEL PEAK 38(17P12) WILD-TYPE     28     58     11
D69V7, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         56                           28
  CLUS_2                         29                           58
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17P12) MUTATED       41     17     19      9
  DEL PEAK 38(17P12) WILD-TYPE     21      9     43     24
D69V8, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         41                           21
  CLUS_2                         17                            9
  CLUS_3                         19                           43
  CLUS_4                          9                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17P12) MUTATED       42     26     12      5
  DEL PEAK 38(17P12) WILD-TYPE     24     40     23      6
D69V9, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         42                           24
  CLUS_2                         26                           40
  CLUS_3                         12                           23
  CLUS_4                          5                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       41     16     28
  DEL PEAK 38(17P12) WILD-TYPE     21      6     66
D69V10, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         41                           21
  CLUS_2                         16                            6
  CLUS_3                         28                           66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 39(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       11     10     20
  DEL PEAK 39(17Q25.3) WILD-TYPE     54     34     55
D70V1, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                           10                             34
  CLUS_3                           20                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       19      6     16
  DEL PEAK 39(17Q25.3) WILD-TYPE     57     26     60
D70V2, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           19                             57
  CLUS_2                            6                             26
  CLUS_3                           16                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(17Q25.3) MUTATED        5      5      8      8      2
  DEL PEAK 39(17Q25.3) WILD-TYPE     21     23     22     26      6
D70V3, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            5                             21
  CLUS_2                            5                             23
  CLUS_3                            8                             22
  CLUS_4                            8                             26
  CLUS_5                            2                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(17Q25.3) MUTATED        4      3      4      7     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     19     18     18     19     24
D70V4, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            4                             19
  CLUS_2                            3                             18
  CLUS_3                            4                             18
  CLUS_4                            7                             19
  CLUS_5                           10                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       19     16      5      1
  DEL PEAK 39(17Q25.3) WILD-TYPE     62     53     17     10
D70V5, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           19                             62
  CLUS_2                           16                             53
  CLUS_3                            5                             17
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       15      4     22
  DEL PEAK 39(17Q25.3) WILD-TYPE     52     16     74
D70V6, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           15                             52
  CLUS_2                            4                             16
  CLUS_3                           22                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       19     22      0
  DEL PEAK 39(17Q25.3) WILD-TYPE     65     65     12
D70V7, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           19                             65
  CLUS_2                           22                             65
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       12      7     12     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     50     19     50     23
D70V8, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             19
  CLUS_3                           12                             50
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       14     21      3      1
  DEL PEAK 39(17Q25.3) WILD-TYPE     52     45     32     10
D70V9, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           14                             52
  CLUS_2                           21                             45
  CLUS_3                            3                             32
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       12      6     21
  DEL PEAK 39(17Q25.3) WILD-TYPE     50     16     73
D70V10, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            6                             16
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 40(18P11.23) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       25     15     20
  DEL PEAK 40(18P11.23) WILD-TYPE     40     29     55
D71V1, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            25                              40
  CLUS_2                            15                              29
  CLUS_3                            20                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       35      7     18
  DEL PEAK 40(18P11.23) WILD-TYPE     41     25     58
D71V2, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            35                              41
  CLUS_2                             7                              25
  CLUS_3                            18                              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(18P11.23) MUTATED       12     10     12      8      2
  DEL PEAK 40(18P11.23) WILD-TYPE     14     18     18     26      6
D71V3, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            12                              14
  CLUS_2                            10                              18
  CLUS_3                            12                              18
  CLUS_4                             8                              26
  CLUS_5                             2                               6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(18P11.23) MUTATED        7      9      9      7     12
  DEL PEAK 40(18P11.23) WILD-TYPE     16     12     13     19     22
D71V4, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                             7                              16
  CLUS_2                             9                              12
  CLUS_3                             9                              13
  CLUS_4                             7                              19
  CLUS_5                            12                              22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18P11.23) MUTATED       35     17      4      3
  DEL PEAK 40(18P11.23) WILD-TYPE     46     52     18      8
D71V5, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            35                              46
  CLUS_2                            17                              52
  CLUS_3                             4                              18
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       29      7     23
  DEL PEAK 40(18P11.23) WILD-TYPE     38     13     73
D71V6, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            29                              38
  CLUS_2                             7                              13
  CLUS_3                            23                              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       35     20      5
  DEL PEAK 40(18P11.23) WILD-TYPE     49     67      7
D71V7, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            35                              49
  CLUS_2                            20                              67
  CLUS_3                             5                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18P11.23) MUTATED       26     10     17      7
  DEL PEAK 40(18P11.23) WILD-TYPE     36     16     45     26
D71V8, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              36
  CLUS_2                            10                              16
  CLUS_3                            17                              45
  CLUS_4                             7                              26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18P11.23) MUTATED       26     15     12      5
  DEL PEAK 40(18P11.23) WILD-TYPE     40     51     23      6
D71V9, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              40
  CLUS_2                            15                              51
  CLUS_3                            12                              23
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       26      9     23
  DEL PEAK 40(18P11.23) WILD-TYPE     36     13     71
D71V10, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              36
  CLUS_2                             9                              13
  CLUS_3                            23                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 41(18Q12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       46     25     40
  DEL PEAK 41(18Q12.2) WILD-TYPE     19     19     35
D72V1, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           46                             19
  CLUS_2                           25                             19
  CLUS_3                           40                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       55     16     40
  DEL PEAK 41(18Q12.2) WILD-TYPE     21     16     36
D72V2, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           55                             21
  CLUS_2                           16                             16
  CLUS_3                           40                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(18Q12.2) MUTATED       19     17     17     18      6
  DEL PEAK 41(18Q12.2) WILD-TYPE      7     11     13     16      2
D72V3, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           19                              7
  CLUS_2                           17                             11
  CLUS_3                           17                             13
  CLUS_4                           18                             16
  CLUS_5                            6                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(18Q12.2) MUTATED       16     14     13     17     17
  DEL PEAK 41(18Q12.2) WILD-TYPE      7      7      9      9     17
D72V4, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           16                              7
  CLUS_2                           14                              7
  CLUS_3                           13                              9
  CLUS_4                           17                              9
  CLUS_5                           17                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q12.2) MUTATED       57     38      8      7
  DEL PEAK 41(18Q12.2) WILD-TYPE     24     31     14      4
D72V5, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           57                             24
  CLUS_2                           38                             31
  CLUS_3                            8                             14
  CLUS_4                            7                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       46     14     50
  DEL PEAK 41(18Q12.2) WILD-TYPE     21      6     46
D72V6, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           46                             21
  CLUS_2                           14                              6
  CLUS_3                           50                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       59     45      7
  DEL PEAK 41(18Q12.2) WILD-TYPE     25     42      5
D72V7, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           59                             25
  CLUS_2                           45                             42
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q12.2) MUTATED       38     23     38     12
  DEL PEAK 41(18Q12.2) WILD-TYPE     24      3     24     21
D72V8, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           38                             24
  CLUS_2                           23                              3
  CLUS_3                           38                             24
  CLUS_4                           12                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q12.2) MUTATED       45     32     26      6
  DEL PEAK 41(18Q12.2) WILD-TYPE     21     34      9      5
D72V9, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           45                             21
  CLUS_2                           32                             34
  CLUS_3                           26                              9
  CLUS_4                            6                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       39     21     49
  DEL PEAK 41(18Q12.2) WILD-TYPE     23      1     45
D72V10, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           39                             23
  CLUS_2                           21                              1
  CLUS_3                           49                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 42(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       48     27     44
  DEL PEAK 42(18Q21.2) WILD-TYPE     17     17     31
D73V1, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           48                             17
  CLUS_2                           27                             17
  CLUS_3                           44                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       61     17     41
  DEL PEAK 42(18Q21.2) WILD-TYPE     15     15     35
D73V2, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           61                             15
  CLUS_2                           17                             15
  CLUS_3                           41                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(18Q21.2) MUTATED       20     19     18     18      6
  DEL PEAK 42(18Q21.2) WILD-TYPE      6      9     12     16      2
D73V3, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           20                              6
  CLUS_2                           19                              9
  CLUS_3                           18                             12
  CLUS_4                           18                             16
  CLUS_5                            6                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(18Q21.2) MUTATED       16     16     14     15     20
  DEL PEAK 42(18Q21.2) WILD-TYPE      7      5      8     11     14
D73V4, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           16                              7
  CLUS_2                           16                              5
  CLUS_3                           14                              8
  CLUS_4                           15                             11
  CLUS_5                           20                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q21.2) MUTATED       63     38     10      7
  DEL PEAK 42(18Q21.2) WILD-TYPE     18     31     12      4
D73V5, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           63                             18
  CLUS_2                           38                             31
  CLUS_3                           10                             12
  CLUS_4                            7                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       51     15     52
  DEL PEAK 42(18Q21.2) WILD-TYPE     16      5     44
D73V6, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           51                             16
  CLUS_2                           15                              5
  CLUS_3                           52                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       65     47      7
  DEL PEAK 42(18Q21.2) WILD-TYPE     19     40      5
D73V7, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           65                             19
  CLUS_2                           47                             40
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q21.2) MUTATED       43     23     39     14
  DEL PEAK 42(18Q21.2) WILD-TYPE     19      3     23     19
D73V8, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           23                              3
  CLUS_3                           39                             23
  CLUS_4                           14                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q21.2) MUTATED       49     33     26      8
  DEL PEAK 42(18Q21.2) WILD-TYPE     17     33      9      3
D73V9, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           49                             17
  CLUS_2                           33                             33
  CLUS_3                           26                              9
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       43     21     52
  DEL PEAK 42(18Q21.2) WILD-TYPE     19      1     42
D73V10, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           21                              1
  CLUS_3                           52                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 43(18Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       40     26     46
  DEL PEAK 43(18Q22.3) WILD-TYPE     25     18     29
D74V1, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           40                             25
  CLUS_2                           26                             18
  CLUS_3                           46                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       54     15     43
  DEL PEAK 43(18Q22.3) WILD-TYPE     22     17     33
D74V2, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           54                             22
  CLUS_2                           15                             17
  CLUS_3                           43                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(18Q22.3) MUTATED       17     18     18     19      6
  DEL PEAK 43(18Q22.3) WILD-TYPE      9     10     12     15      2
D74V3, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           17                              9
  CLUS_2                           18                             10
  CLUS_3                           18                             12
  CLUS_4                           19                             15
  CLUS_5                            6                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(18Q22.3) MUTATED       13     15     14     15     21
  DEL PEAK 43(18Q22.3) WILD-TYPE     10      6      8     11     13
D74V4, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           13                             10
  CLUS_2                           15                              6
  CLUS_3                           14                              8
  CLUS_4                           15                             11
  CLUS_5                           21                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q22.3) MUTATED       56     39     10      6
  DEL PEAK 43(18Q22.3) WILD-TYPE     25     30     12      5
D74V5, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           56                             25
  CLUS_2                           39                             30
  CLUS_3                           10                             12
  CLUS_4                            6                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       47     11     53
  DEL PEAK 43(18Q22.3) WILD-TYPE     20      9     43
D74V6, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           47                             20
  CLUS_2                           11                              9
  CLUS_3                           53                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       57     48      7
  DEL PEAK 43(18Q22.3) WILD-TYPE     27     39      5
D74V7, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           57                             27
  CLUS_2                           48                             39
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q22.3) MUTATED       35     23     38     16
  DEL PEAK 43(18Q22.3) WILD-TYPE     27      3     24     17
D74V8, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           35                             27
  CLUS_2                           23                              3
  CLUS_3                           38                             24
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q22.3) MUTATED       41     33     26      9
  DEL PEAK 43(18Q22.3) WILD-TYPE     25     33      9      2
D74V9, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           41                             25
  CLUS_2                           33                             33
  CLUS_3                           26                              9
  CLUS_4                            9                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       35     21     53
  DEL PEAK 43(18Q22.3) WILD-TYPE     27      1     41
D74V10, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           35                             27
  CLUS_2                           21                              1
  CLUS_3                           53                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 44(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       43     12     38
  DEL PEAK 44(19P13.3) WILD-TYPE     22     32     37
D75V1, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           43                             22
  CLUS_2                           12                             32
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       43     13     37
  DEL PEAK 44(19P13.3) WILD-TYPE     33     19     39
D75V2, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           43                             33
  CLUS_2                           13                             19
  CLUS_3                           37                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(19P13.3) MUTATED       16     12     13     12      5
  DEL PEAK 44(19P13.3) WILD-TYPE     10     16     17     22      3
D75V3, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           16                             10
  CLUS_2                           12                             16
  CLUS_3                           13                             17
  CLUS_4                           12                             22
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(19P13.3) MUTATED       11      9     10     13     15
  DEL PEAK 44(19P13.3) WILD-TYPE     12     12     12     13     19
D75V4, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           11                             12
  CLUS_2                            9                             12
  CLUS_3                           10                             12
  CLUS_4                           13                             13
  CLUS_5                           15                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       47     34     10      2
  DEL PEAK 44(19P13.3) WILD-TYPE     34     35     12      9
D75V5, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           47                             34
  CLUS_2                           34                             35
  CLUS_3                           10                             12
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       39      9     45
  DEL PEAK 44(19P13.3) WILD-TYPE     28     11     51
D75V6, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           39                             28
  CLUS_2                            9                             11
  CLUS_3                           45                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       47     44      2
  DEL PEAK 44(19P13.3) WILD-TYPE     37     43     10
D75V7, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           47                             37
  CLUS_2                           44                             43
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       40      9     26     18
  DEL PEAK 44(19P13.3) WILD-TYPE     22     17     36     15
D75V8, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           40                             22
  CLUS_2                            9                             17
  CLUS_3                           26                             36
  CLUS_4                           18                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       39     35     12      5
  DEL PEAK 44(19P13.3) WILD-TYPE     27     31     23      6
D75V9, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           39                             27
  CLUS_2                           35                             31
  CLUS_3                           12                             23
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       41      7     43
  DEL PEAK 44(19P13.3) WILD-TYPE     21     15     51
D75V10, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           41                             21
  CLUS_2                            7                             15
  CLUS_3                           43                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 45(19Q11) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       19      7     22
  DEL PEAK 45(19Q11) WILD-TYPE     46     37     53
D76V1, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         19                           46
  CLUS_2                          7                           37
  CLUS_3                         22                           53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       17      7     24
  DEL PEAK 45(19Q11) WILD-TYPE     59     25     52
D76V2, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         17                           59
  CLUS_2                          7                           25
  CLUS_3                         24                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(19Q11) MUTATED       10      6      2     12      3
  DEL PEAK 45(19Q11) WILD-TYPE     16     22     28     22      5
D76V3, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         10                           16
  CLUS_2                          6                           22
  CLUS_3                          2                           28
  CLUS_4                         12                           22
  CLUS_5                          3                            5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(19Q11) MUTATED        6      5      4      9      9
  DEL PEAK 45(19Q11) WILD-TYPE     17     16     18     17     25
D76V4, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                          6                           17
  CLUS_2                          5                           16
  CLUS_3                          4                           18
  CLUS_4                          9                           17
  CLUS_5                          9                           25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q11) MUTATED       19     23      5      1
  DEL PEAK 45(19Q11) WILD-TYPE     62     46     17     10
D76V5, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         19                           62
  CLUS_2                         23                           46
  CLUS_3                          5                           17
  CLUS_4                          1                           10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       17      4     27
  DEL PEAK 45(19Q11) WILD-TYPE     50     16     69
D76V6, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         17                           50
  CLUS_2                          4                           16
  CLUS_3                         27                           69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       21     25      1
  DEL PEAK 45(19Q11) WILD-TYPE     63     62     11
D76V7, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         21                           63
  CLUS_2                         25                           62
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q11) MUTATED       21      1     15     10
  DEL PEAK 45(19Q11) WILD-TYPE     41     25     47     23
D76V8, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          1                           25
  CLUS_3                         15                           47
  CLUS_4                         10                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q11) MUTATED       17     23      1      4
  DEL PEAK 45(19Q11) WILD-TYPE     49     43     34      7
D76V9, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         17                           49
  CLUS_2                         23                           43
  CLUS_3                          1                           34
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       20      1     24
  DEL PEAK 45(19Q11) WILD-TYPE     42     21     70
D76V10, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         20                           42
  CLUS_2                          1                           21
  CLUS_3                         24                           70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 46(20P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       18      7      8
  DEL PEAK 46(20P12.1) WILD-TYPE     47     37     67
D77V1, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           18                             47
  CLUS_2                            7                             37
  CLUS_3                            8                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       18      6      9
  DEL PEAK 46(20P12.1) WILD-TYPE     58     26     67
D77V2, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           18                             58
  CLUS_2                            6                             26
  CLUS_3                            9                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(20P12.1) MUTATED        9      3      3      7      0
  DEL PEAK 46(20P12.1) WILD-TYPE     17     25     27     27      8
D77V3, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                            9                             17
  CLUS_2                            3                             25
  CLUS_3                            3                             27
  CLUS_4                            7                             27
  CLUS_5                            0                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(20P12.1) MUTATED        5      3      4      3      7
  DEL PEAK 46(20P12.1) WILD-TYPE     18     18     18     23     27
D77V4, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                            5                             18
  CLUS_2                            3                             18
  CLUS_3                            4                             18
  CLUS_4                            3                             23
  CLUS_5                            7                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P12.1) MUTATED       21      9      3      0
  DEL PEAK 46(20P12.1) WILD-TYPE     60     60     19     11
D77V5, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           21                             60
  CLUS_2                            9                             60
  CLUS_3                            3                             19
  CLUS_4                            0                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       20      2     11
  DEL PEAK 46(20P12.1) WILD-TYPE     47     18     85
D77V6, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           20                             47
  CLUS_2                            2                             18
  CLUS_3                           11                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       22     11      0
  DEL PEAK 46(20P12.1) WILD-TYPE     62     76     12
D77V7, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           22                             62
  CLUS_2                           11                             76
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P12.1) MUTATED       15      7      5      6
  DEL PEAK 46(20P12.1) WILD-TYPE     47     19     57     27
D77V8, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           15                             47
  CLUS_2                            7                             19
  CLUS_3                            5                             57
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P12.1) MUTATED       16     10      4      3
  DEL PEAK 46(20P12.1) WILD-TYPE     50     56     31      8
D77V9, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           16                             50
  CLUS_2                           10                             56
  CLUS_3                            4                             31
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       16      6     11
  DEL PEAK 46(20P12.1) WILD-TYPE     46     16     83
D77V10, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           16                             46
  CLUS_2                            6                             16
  CLUS_3                           11                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 47(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       42     20     45
  DEL PEAK 47(21Q11.2) WILD-TYPE     23     24     30
D78V1, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           42                             23
  CLUS_2                           20                             24
  CLUS_3                           45                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       53     16     38
  DEL PEAK 47(21Q11.2) WILD-TYPE     23     16     38
D78V2, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           53                             23
  CLUS_2                           16                             16
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(21Q11.2) MUTATED       18     14     21     19      5
  DEL PEAK 47(21Q11.2) WILD-TYPE      8     14      9     15      3
D78V3, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           18                              8
  CLUS_2                           14                             14
  CLUS_3                           21                              9
  CLUS_4                           19                             15
  CLUS_5                            5                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(21Q11.2) MUTATED       16     13     17     14     17
  DEL PEAK 47(21Q11.2) WILD-TYPE      7      8      5     12     17
D78V4, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           16                              7
  CLUS_2                           13                              8
  CLUS_3                           17                              5
  CLUS_4                           14                             12
  CLUS_5                           17                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q11.2) MUTATED       53     37     12      4
  DEL PEAK 47(21Q11.2) WILD-TYPE     28     32     10      7
D78V5, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           53                             28
  CLUS_2                           37                             32
  CLUS_3                           12                             10
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       42     14     50
  DEL PEAK 47(21Q11.2) WILD-TYPE     25      6     46
D78V6, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           42                             25
  CLUS_2                           14                              6
  CLUS_3                           50                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       56     47      4
  DEL PEAK 47(21Q11.2) WILD-TYPE     28     40      8
D78V7, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           56                             28
  CLUS_2                           47                             40
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q11.2) MUTATED       43     13     32     19
  DEL PEAK 47(21Q11.2) WILD-TYPE     19     13     30     14
D78V8, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           13                             13
  CLUS_3                           32                             30
  CLUS_4                           19                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q11.2) MUTATED       44     32     20      8
  DEL PEAK 47(21Q11.2) WILD-TYPE     22     34     15      3
D78V9, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           44                             22
  CLUS_2                           32                             34
  CLUS_3                           20                             15
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       43     12     49
  DEL PEAK 47(21Q11.2) WILD-TYPE     19     10     45
D78V10, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           12                             10
  CLUS_3                           49                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 48(21Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       42     20     45
  DEL PEAK 48(21Q21.1) WILD-TYPE     23     24     30
D79V1, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           42                             23
  CLUS_2                           20                             24
  CLUS_3                           45                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       54     14     39
  DEL PEAK 48(21Q21.1) WILD-TYPE     22     18     37
D79V2, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           54                             22
  CLUS_2                           14                             18
  CLUS_3                           39                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q21.1) MUTATED       18     14     20     17      4
  DEL PEAK 48(21Q21.1) WILD-TYPE      8     14     10     17      4
D79V3, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           18                              8
  CLUS_2                           14                             14
  CLUS_3                           20                             10
  CLUS_4                           17                             17
  CLUS_5                            4                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q21.1) MUTATED       15     13     17     12     16
  DEL PEAK 48(21Q21.1) WILD-TYPE      8      8      5     14     18
D79V4, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           15                              8
  CLUS_2                           13                              8
  CLUS_3                           17                              5
  CLUS_4                           12                             14
  CLUS_5                           16                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q21.1) MUTATED       54     37     12      3
  DEL PEAK 48(21Q21.1) WILD-TYPE     27     32     10      8
D79V5, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           54                             27
  CLUS_2                           37                             32
  CLUS_3                           12                             10
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       43     14     49
  DEL PEAK 48(21Q21.1) WILD-TYPE     24      6     47
D79V6, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           43                             24
  CLUS_2                           14                              6
  CLUS_3                           49                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       56     46      5
  DEL PEAK 48(21Q21.1) WILD-TYPE     28     41      7
D79V7, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           56                             28
  CLUS_2                           46                             41
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q21.1) MUTATED       43     14     34     16
  DEL PEAK 48(21Q21.1) WILD-TYPE     19     12     28     17
D79V8, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           14                             12
  CLUS_3                           34                             28
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q21.1) MUTATED       44     33     18      9
  DEL PEAK 48(21Q21.1) WILD-TYPE     22     33     17      2
D79V9, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           44                             22
  CLUS_2                           33                             33
  CLUS_3                           18                             17
  CLUS_4                            9                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       43     13     48
  DEL PEAK 48(21Q21.1) WILD-TYPE     19      9     46
D79V10, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           13                              9
  CLUS_3                           48                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 49(21Q22.12) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       43     20     45
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     24     30
D80V1, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            43                              22
  CLUS_2                            20                              24
  CLUS_3                            45                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       54     14     40
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     18     36
D80V2, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            54                              22
  CLUS_2                            14                              18
  CLUS_3                            40                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.12) MUTATED       18     14     19     17      4
  DEL PEAK 49(21Q22.12) WILD-TYPE      8     14     11     17      4
D80V3, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            18                               8
  CLUS_2                            14                              14
  CLUS_3                            19                              11
  CLUS_4                            17                              17
  CLUS_5                             4                               4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.12) MUTATED       16     13     15     12     16
  DEL PEAK 49(21Q22.12) WILD-TYPE      7      8      7     14     18
D80V4, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            16                               7
  CLUS_2                            13                               8
  CLUS_3                            15                               7
  CLUS_4                            12                              14
  CLUS_5                            16                              18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.12) MUTATED       54     36     14      3
  DEL PEAK 49(21Q22.12) WILD-TYPE     27     33      8      8
D80V5, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            54                              27
  CLUS_2                            36                              33
  CLUS_3                            14                               8
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       43     14     50
  DEL PEAK 49(21Q22.12) WILD-TYPE     24      6     46
D80V6, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            43                              24
  CLUS_2                            14                               6
  CLUS_3                            50                              46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       57     47      4
  DEL PEAK 49(21Q22.12) WILD-TYPE     27     40      8
D80V7, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            57                              27
  CLUS_2                            47                              40
  CLUS_3                             4                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.12) MUTATED       42     15     32     19
  DEL PEAK 49(21Q22.12) WILD-TYPE     20     11     30     14
D80V8, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            42                              20
  CLUS_2                            15                              11
  CLUS_3                            32                              30
  CLUS_4                            19                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.12) MUTATED       44     34     17      9
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     32     18      2
D80V9, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            44                              22
  CLUS_2                            34                              32
  CLUS_3                            17                              18
  CLUS_4                             9                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       41     14     49
  DEL PEAK 49(21Q22.12) WILD-TYPE     21      8     45
D80V10, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            41                              21
  CLUS_2                            14                               8
  CLUS_3                            49                              45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = DEL PEAK 50(22Q11.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       46     13     20
  DEL PEAK 50(22Q11.1) WILD-TYPE     19     31     55
D81V1, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           46                             19
  CLUS_2                           13                             31
  CLUS_3                           20                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       51     10     18
  DEL PEAK 50(22Q11.1) WILD-TYPE     25     22     58
D81V2, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           51                             25
  CLUS_2                           10                             22
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       19     12     10      7      1
  DEL PEAK 50(22Q11.1) WILD-TYPE      7     16     20     27      7
D81V3, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           19                              7
  CLUS_2                           12                             16
  CLUS_3                           10                             20
  CLUS_4                            7                             27
  CLUS_5                            1                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       14     12      9      8      6
  DEL PEAK 50(22Q11.1) WILD-TYPE      9      9     13     18     28
D81V4, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           14                              9
  CLUS_2                           12                              9
  CLUS_3                            9                             13
  CLUS_4                            8                             18
  CLUS_5                            6                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       51     20      5      3
  DEL PEAK 50(22Q11.1) WILD-TYPE     30     49     17      8
D81V5, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           51                             30
  CLUS_2                           20                             49
  CLUS_3                            5                             17
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       43     10     26
  DEL PEAK 50(22Q11.1) WILD-TYPE     24     10     70
D81V6, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           43                             24
  CLUS_2                           10                             10
  CLUS_3                           26                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       53     25      1
  DEL PEAK 50(22Q11.1) WILD-TYPE     31     62     11
D81V7, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           53                             31
  CLUS_2                           25                             62
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       43     11     16      9
  DEL PEAK 50(22Q11.1) WILD-TYPE     19     15     46     24
D81V8, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           11                             15
  CLUS_3                           16                             46
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       48     19      7      3
  DEL PEAK 50(22Q11.1) WILD-TYPE     18     47     28      8
D81V9, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           48                             18
  CLUS_2                           19                             47
  CLUS_3                            7                             28
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       44      9     24
  DEL PEAK 50(22Q11.1) WILD-TYPE     18     13     70
D81V10, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           44                             18
  CLUS_2                            9                             13
  CLUS_3                           24                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = DEL PEAK 51(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       25      7     37
  DEL PEAK 51(XP21.1) WILD-TYPE     40     37     38
D82V1, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                           7                            37
  CLUS_3                          37                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       26      7     36
  DEL PEAK 51(XP21.1) WILD-TYPE     50     25     40
D82V2, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          26                            50
  CLUS_2                           7                            25
  CLUS_3                          36                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(XP21.1) MUTATED       11      9     10     21      1
  DEL PEAK 51(XP21.1) WILD-TYPE     15     19     20     13      7
D82V3, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          11                            15
  CLUS_2                           9                            19
  CLUS_3                          10                            20
  CLUS_4                          21                            13
  CLUS_5                           1                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(XP21.1) MUTATED       10      7      7     11     17
  DEL PEAK 51(XP21.1) WILD-TYPE     13     14     15     15     17
D82V4, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          10                            13
  CLUS_2                           7                            14
  CLUS_3                           7                            15
  CLUS_4                          11                            15
  CLUS_5                          17                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       27     34      3      5
  DEL PEAK 51(XP21.1) WILD-TYPE     54     35     19      6
D82V5, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          27                            54
  CLUS_2                          34                            35
  CLUS_3                           3                            19
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       20      7     42
  DEL PEAK 51(XP21.1) WILD-TYPE     47     13     54
D82V6, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          20                            47
  CLUS_2                           7                            13
  CLUS_3                          42                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       27     40      2
  DEL PEAK 51(XP21.1) WILD-TYPE     57     47     10
D82V7, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          27                            57
  CLUS_2                          40                            47
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       23      5     27     14
  DEL PEAK 51(XP21.1) WILD-TYPE     39     21     35     19
D82V8, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           5                            21
  CLUS_3                          27                            35
  CLUS_4                          14                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       22     32      9      4
  DEL PEAK 51(XP21.1) WILD-TYPE     44     34     26      7
D82V9, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          22                            44
  CLUS_2                          32                            34
  CLUS_3                           9                            26
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       21      5     41
  DEL PEAK 51(XP21.1) WILD-TYPE     41     17     53
D82V10, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          21                            41
  CLUS_2                           5                            17
  CLUS_3                          41                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = DEL PEAK 52(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       24      9     41
  DEL PEAK 52(XP11.3) WILD-TYPE     41     35     34
D83V1, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          24                            41
  CLUS_2                           9                            35
  CLUS_3                          41                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       26     11     37
  DEL PEAK 52(XP11.3) WILD-TYPE     50     21     39
D83V2, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          26                            50
  CLUS_2                          11                            21
  CLUS_3                          37                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP11.3) MUTATED       11     10     15     20      2
  DEL PEAK 52(XP11.3) WILD-TYPE     15     18     15     14      6
D83V3, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          11                            15
  CLUS_2                          10                            18
  CLUS_3                          15                            15
  CLUS_4                          20                            14
  CLUS_5                           2                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP11.3) MUTATED        9      9     10     14     16
  DEL PEAK 52(XP11.3) WILD-TYPE     14     12     12     12     18
D83V4, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                           9                            12
  CLUS_3                          10                            12
  CLUS_4                          14                            12
  CLUS_5                          16                            18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       26     38      5      5
  DEL PEAK 52(XP11.3) WILD-TYPE     55     31     17      6
D83V5, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          26                            55
  CLUS_2                          38                            31
  CLUS_3                           5                            17
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       20      6     48
  DEL PEAK 52(XP11.3) WILD-TYPE     47     14     48
D83V6, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          20                            47
  CLUS_2                           6                            14
  CLUS_3                          48                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       26     46      2
  DEL PEAK 52(XP11.3) WILD-TYPE     58     41     10
D83V7, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          26                            58
  CLUS_2                          46                            41
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       21      6     29     18
  DEL PEAK 52(XP11.3) WILD-TYPE     41     20     33     15
D83V8, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          21                            41
  CLUS_2                           6                            20
  CLUS_3                          29                            33
  CLUS_4                          18                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       21     36     11      4
  DEL PEAK 52(XP11.3) WILD-TYPE     45     30     24      7
D83V9, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          36                            30
  CLUS_3                          11                            24
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       20      5     47
  DEL PEAK 52(XP11.3) WILD-TYPE     42     17     47
D83V10, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          20                            42
  CLUS_2                           5                            17
  CLUS_3                          47                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(84) Variable = DEL PEAK 53(XQ11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       18      8     16
  DEL PEAK 53(XQ11.2) WILD-TYPE     47     36     59
D84V1, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           8                            36
  CLUS_3                          16                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       21      4     17
  DEL PEAK 53(XQ11.2) WILD-TYPE     55     28     59
D84V2, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          21                            55
  CLUS_2                           4                            28
  CLUS_3                          17                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XQ11.2) MUTATED        9      7      7      8      0
  DEL PEAK 53(XQ11.2) WILD-TYPE     17     21     23     26      8
D84V3, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                           9                            17
  CLUS_2                           7                            21
  CLUS_3                           7                            23
  CLUS_4                           8                            26
  CLUS_5                           0                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XQ11.2) MUTATED        7      6      6      4      8
  DEL PEAK 53(XQ11.2) WILD-TYPE     16     15     16     22     26
D84V4, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                           7                            16
  CLUS_2                           6                            15
  CLUS_3                           6                            16
  CLUS_4                           4                            22
  CLUS_5                           8                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ11.2) MUTATED       22     16      3      1
  DEL PEAK 53(XQ11.2) WILD-TYPE     59     53     19     10
D84V5, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          22                            59
  CLUS_2                          16                            53
  CLUS_3                           3                            19
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       16      6     20
  DEL PEAK 53(XQ11.2) WILD-TYPE     51     14     76
D84V6, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          16                            51
  CLUS_2                           6                            14
  CLUS_3                          20                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       22     20      0
  DEL PEAK 53(XQ11.2) WILD-TYPE     62     67     12
D84V7, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          22                            62
  CLUS_2                          20                            67
  CLUS_3                           0                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ11.2) MUTATED       17      6      9     10
  DEL PEAK 53(XQ11.2) WILD-TYPE     45     20     53     23
D84V8, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           6                            20
  CLUS_3                           9                            53
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ11.2) MUTATED       17     17      6      0
  DEL PEAK 53(XQ11.2) WILD-TYPE     49     49     29     11
D84V9, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          17                            49
  CLUS_3                           6                            29
  CLUS_4                           0                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       16      5     19
  DEL PEAK 53(XQ11.2) WILD-TYPE     46     17     75
D84V10, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          16                            46
  CLUS_2                           5                            17
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = DEL PEAK 54(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       19      6     15
  DEL PEAK 54(XQ21.33) WILD-TYPE     46     38     60
D85V1, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           19                             46
  CLUS_2                            6                             38
  CLUS_3                           15                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       21      4     15
  DEL PEAK 54(XQ21.33) WILD-TYPE     55     28     61
D85V2, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           21                             55
  CLUS_2                            4                             28
  CLUS_3                           15                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XQ21.33) MUTATED       10      6      5      6      0
  DEL PEAK 54(XQ21.33) WILD-TYPE     16     22     25     28      8
D85V3, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           10                             16
  CLUS_2                            6                             22
  CLUS_3                            5                             25
  CLUS_4                            6                             28
  CLUS_5                            0                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XQ21.33) MUTATED        7      4      4      6      6
  DEL PEAK 54(XQ21.33) WILD-TYPE     16     17     18     20     28
D85V4, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                            4                             17
  CLUS_3                            4                             18
  CLUS_4                            6                             20
  CLUS_5                            6                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XQ21.33) MUTATED       22     15      2      1
  DEL PEAK 54(XQ21.33) WILD-TYPE     59     54     20     10
D85V5, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           22                             59
  CLUS_2                           15                             54
  CLUS_3                            2                             20
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       19      3     18
  DEL PEAK 54(XQ21.33) WILD-TYPE     48     17     78
D85V6, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           19                             48
  CLUS_2                            3                             17
  CLUS_3                           18                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       22     18      0
  DEL PEAK 54(XQ21.33) WILD-TYPE     62     69     12
D85V7, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           22                             62
  CLUS_2                           18                             69
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XQ21.33) MUTATED       20      3      8      9
  DEL PEAK 54(XQ21.33) WILD-TYPE     42     23     54     24
D85V8, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                            3                             23
  CLUS_3                            8                             54
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XQ21.33) MUTATED       18     15      3      2
  DEL PEAK 54(XQ21.33) WILD-TYPE     48     51     32      9
D85V9, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           18                             48
  CLUS_2                           15                             51
  CLUS_3                            3                             32
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       18      3     17
  DEL PEAK 54(XQ21.33) WILD-TYPE     44     19     77
D85V10, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           18                             44
  CLUS_2                            3                             19
  CLUS_3                           17                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
