name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-BA-4074-01A-01D-1434-08	168	165	3	127	1.785714e-02	coding only	1	28836876	...	38	118	168	1.317757e-06	4.091983e-06	5.825874e-06	-5.234639e+00	...	9	28780680	...	3.127098e-07
TCGA-BA-4075-01A-01D-1434-08	223	218	5	162	2.242152e-02	coding only	1	28836876	...	56	148	223	1.941958e-06	5.132317e-06	7.733154e-06	-5.111643e+00	...	14	28780680	...	4.864374e-07
TCGA-BA-4076-01A-01D-1434-08	388	378	10	292	2.577320e-02	coding only	1	28836876	...	86	281	387	2.982293e-06	9.744467e-06	1.342032e-05	-4.872237e+00	...	10	28780680	...	3.474553e-07
TCGA-BA-4077-01B-01D-1434-08	376	368	8	274	2.127660e-02	coding only	1	28836876	...	94	263	376	3.259715e-06	9.120267e-06	1.303886e-05	-4.884760e+00	...	11	28780680	...	3.822008e-07
TCGA-BA-4078-01A-01D-1434-08	514	503	11	377	2.140078e-02	coding only	1	28836876	...	126	363	514	4.369405e-06	1.258805e-05	1.782440e-05	-4.748985e+00	...	14	28780680	...	4.864374e-07
TCGA-BA-5149-01A-01D-1512-08	145	144	1	119	6.896552e-03	coding only	1	28836876	...	25	111	145	8.669455e-07	3.849238e-06	5.028284e-06	-5.298580e+00	...	8	28780680	...	2.779642e-07
TCGA-BA-5151-01A-01D-1434-08	113	109	4	81	3.539823e-02	coding only	1	28836876	...	27	76	112	9.363011e-07	2.635514e-06	3.883916e-06	-5.410730e+00	...	5	28780680	...	1.737277e-07
TCGA-BA-5152-01A-02D-1870-08	603	593	10	435	1.658375e-02	coding only	1	28836876	...	158	431	603	5.479096e-06	1.494614e-05	2.091073e-05	-4.679631e+00	...	3	28780680	...	1.042366e-07
TCGA-BA-5153-01A-01D-1434-08	56	54	2	44	3.571429e-02	coding only	1	28836876	...	10	42	56	3.467782e-07	1.456468e-06	1.941958e-06	-5.711760e+00	...	2	28780680	...	6.949106e-08
TCGA-BA-5555-01A-01D-1512-08	162	160	2	130	1.234568e-02	coding only	1	28836876	...	30	124	161	1.040335e-06	4.300050e-06	5.583129e-06	-5.253122e+00	...	5	28780680	...	1.737277e-07
TCGA-BA-5556-01A-01D-1512-08	167	165	2	128	1.197605e-02	coding only	1	28836876	...	37	123	167	1.283079e-06	4.265372e-06	5.791196e-06	-5.237232e+00	...	5	28780680	...	1.737277e-07
TCGA-BA-5557-01A-01D-1512-08	63	63	0	45	0	coding only	1	28836876	...	18	44	63	6.242008e-07	1.525824e-06	2.184703e-06	-5.660608e+00	...	1	28780680	...	3.474553e-08
TCGA-BA-5558-01A-01D-1512-08	195	194	1	130	5.128205e-03	coding only	1	28836876	...	64	127	195	2.219380e-06	4.404083e-06	6.762175e-06	-5.169914e+00	...	3	28780680	...	1.042366e-07
TCGA-BA-5559-01A-01D-1512-08	101	101	0	77	0	coding only	1	28836876	...	24	76	101	8.322677e-07	2.635514e-06	3.502460e-06	-5.455627e+00	...	1	28780680	...	3.474553e-08
TCGA-BA-6868-01B-12D-1912-08	185	180	5	135	2.702703e-02	coding only	1	28836876	...	45	126	184	1.560502e-06	4.369405e-06	6.380719e-06	-5.195130e+00	...	8	28780680	...	2.779642e-07
TCGA-BA-6869-01A-11D-1870-08	538	528	10	399	1.858736e-02	coding only	1	28836876	...	129	381	537	4.473439e-06	1.321225e-05	1.862199e-05	-4.729974e+00	...	16	28780680	...	5.559285e-07
TCGA-BA-6870-01A-11D-1870-08	119	119	0	86	0	coding only	1	28836876	...	33	76	119	1.144368e-06	2.635514e-06	4.126661e-06	-5.384401e+00	...	10	28780680	...	3.474553e-07
TCGA-BA-6871-01A-11D-1870-08	165	161	4	127	2.424242e-02	coding only	1	28836876	...	34	123	165	1.179046e-06	4.265372e-06	5.721840e-06	-5.242464e+00	...	4	28780680	...	1.389821e-07
TCGA-BA-6872-01A-11D-1870-08	196	193	3	157	1.530612e-02	coding only	1	28836876	...	36	146	196	1.248402e-06	5.062962e-06	6.796853e-06	-5.167692e+00	...	11	28780680	...	3.822008e-07
TCGA-BA-6873-01A-11D-1870-08	82	82	0	62	0	coding only	1	28836876	...	20	55	82	6.935564e-07	1.907280e-06	2.843581e-06	-5.546134e+00	...	7	28780680	...	2.432187e-07
TCGA-BA-7269-01A-11D-2012-08	114	112	2	84	1.754386e-02	coding only	1	28836876	...	28	79	114	9.709790e-07	2.739548e-06	3.953271e-06	-5.403043e+00	...	5	28780680	...	1.737277e-07
TCGA-BA-A4IF-01A-11D-A25Y-08	118	117	1	96	8.474576e-03	coding only	1	28836876	...	21	87	117	7.282342e-07	3.016970e-06	4.057305e-06	-5.391762e+00	...	8	28780680	...	2.779642e-07
TCGA-BA-A4IG-01A-11D-A25Y-08	146	139	7	105	4.794521e-02	exome+100bp flanks	2	35881627	...	34	98	145	9.475602e-07	2.731203e-06	4.041065e-06	-5.393504e+00	...	7	32159724	...	2.176636e-07
TCGA-BA-A4IH-01A-11D-A25Y-08	56	56	0	47	0	coding only	1	28836876	...	9	45	56	3.121004e-07	1.560502e-06	1.941958e-06	-5.711760e+00	...	2	28780680	...	6.949106e-08
TCGA-BA-A4II-01A-11D-A25Y-08	122	122	0	91	0	coding only	1	28836876	...	31	87	122	1.075012e-06	3.016970e-06	4.230694e-06	-5.373588e+00	...	4	28780680	...	1.389821e-07
TCGA-BA-A6D8-01A-31D-A31L-08	133	127	6	109	4.511278e-02	exome+100bp flanks	2	35881627	...	18	102	133	5.016495e-07	2.842680e-06	3.706632e-06	-5.431020e+00	...	7	32159724	...	2.176636e-07
TCGA-BA-A6DA-01A-31D-A31L-08	795	782	13	593	1.635220e-02	coding only	1	28836876	...	189	565	795	6.554108e-06	1.959297e-05	2.756887e-05	-4.559581e+00	...	28	28780680	...	9.728749e-07
TCGA-BA-A6DB-01A-11D-A30E-08	44	44	0	32	0	coding only	1	28836876	...	12	32	44	4.161338e-07	1.109690e-06	1.525824e-06	-5.816496e+00	...	0	28780680	...	0
TCGA-BA-A6DD-01A-12D-A31L-08	75	75	0	58	0	coding only	1	28836876	...	17	57	75	5.895229e-07	1.976636e-06	2.600837e-06	-5.584887e+00	...	1	28780680	...	3.474553e-08
TCGA-BA-A6DE-01A-22D-A31L-08	147	144	3	106	2.040816e-02	coding only	1	28836876	...	38	98	147	1.317757e-06	3.398426e-06	5.097640e-06	-5.292631e+00	...	8	28780680	...	2.779642e-07
TCGA-BA-A6DF-01A-11D-A30E-08	209	206	3	163	1.435407e-02	coding only	1	28836876	...	43	153	209	1.491146e-06	5.305706e-06	7.247664e-06	-5.139802e+00	...	10	28780680	...	3.474553e-07
TCGA-BA-A6DG-01A-21D-A30E-08	45	43	2	25	4.444444e-02	coding only	1	28836876	...	18	23	45	6.242008e-07	7.975899e-07	1.560502e-06	-5.806736e+00	...	2	28780680	...	6.949106e-08
TCGA-BA-A6DI-01A-11D-A30E-08	128	124	4	98	3.125000e-02	coding only	1	28836876	...	26	93	128	9.016233e-07	3.225037e-06	4.438761e-06	-5.352738e+00	...	5	28780680	...	1.737277e-07
TCGA-BA-A6DJ-01A-11D-A30E-08	354	348	6	246	1.694915e-02	coding only	1	28836876	...	102	234	354	3.537138e-06	8.114610e-06	1.227595e-05	-4.910945e+00	...	11	28780680	...	3.822008e-07
TCGA-BA-A6DL-01A-21D-A30E-08	124	121	3	95	2.419355e-02	coding only	1	28836876	...	26	91	124	9.016233e-07	3.155682e-06	4.300050e-06	-5.366527e+00	...	4	28780680	...	1.389821e-07
TCGA-BB-4217-01A-11D-2078-08	41	41	0	31	0	coding only	1	28836876	...	10	27	41	3.467782e-07	9.363011e-07	1.421791e-06	-5.847164e+00	...	4	28780680	...	1.389821e-07
TCGA-BB-4223-01A-01D-1434-08	382	374	8	281	2.094241e-02	coding only	1	28836876	...	93	278	382	3.225037e-06	9.640434e-06	1.324693e-05	-4.877885e+00	...	3	28780680	...	1.042366e-07
TCGA-BB-4224-01A-01D-1434-08	96	94	2	75	2.083333e-02	coding only	1	28836876	...	19	69	96	6.588786e-07	2.392770e-06	3.329071e-06	-5.477677e+00	...	6	28780680	...	2.084732e-07
TCGA-BB-4225-01A-01D-1434-08	93	92	1	60	1.075269e-02	coding only	1	28836876	...	32	60	93	1.109690e-06	2.080669e-06	3.225037e-06	-5.491465e+00	...	0	28780680	...	0
TCGA-BB-4227-01A-01D-1870-08	314	311	3	212	9.554140e-03	coding only	1	28836876	...	99	200	314	3.433104e-06	6.935564e-06	1.088884e-05	-4.963019e+00	...	12	28780680	...	4.169464e-07
TCGA-BB-4228-01A-01D-1434-08	58	58	0	44	0	coding only	1	28836876	...	14	42	58	4.854895e-07	1.456468e-06	2.011314e-06	-5.696520e+00	...	2	28780680	...	6.949106e-08
TCGA-BB-7861-01A-11D-2229-08	28	28	0	21	0	coding only	1	28836876	...	7	19	28	2.427447e-07	6.588786e-07	9.709790e-07	-6.012790e+00	...	2	28780680	...	6.949106e-08
TCGA-BB-7862-01A-21D-2229-08	465	463	2	336	4.301075e-03	coding only	1	28836876	...	127	310	463	4.404083e-06	1.075012e-05	1.605583e-05	-4.794367e+00	...	24	28780680	...	8.338927e-07
TCGA-BB-7863-01A-11D-2229-08	121	118	3	84	2.479339e-02	coding only	1	28836876	...	34	74	121	1.179046e-06	2.566159e-06	4.196016e-06	-5.377163e+00	...	10	28780680	...	3.474553e-07
TCGA-BB-7864-01A-11D-2229-08	100	98	2	75	2.000000e-02	coding only	1	28836876	...	23	66	100	7.975899e-07	2.288736e-06	3.467782e-06	-5.459948e+00	...	9	28780680	...	3.127098e-07
TCGA-BB-7870-01A-11D-2229-08	332	328	4	249	1.204819e-02	coding only	1	28836876	...	79	232	332	2.739548e-06	8.045254e-06	1.151304e-05	-4.938810e+00	...	17	28780680	...	5.906740e-07
TCGA-BB-7871-01A-11D-2229-08	515	505	10	405	1.941748e-02	coding only	1	28836876	...	100	389	515	3.467782e-06	1.348967e-05	1.785908e-05	-4.748141e+00	...	15	28780680	...	5.211830e-07
TCGA-BB-7872-01A-11D-2229-08	99	97	2	71	2.020202e-02	coding only	1	28836876	...	26	67	99	9.016233e-07	2.323414e-06	3.433104e-06	-5.464313e+00	...	4	28780680	...	1.389821e-07
TCGA-BB-8596-01A-11D-2394-08	109	108	1	73	9.174312e-03	coding only	1	28836876	...	35	71	109	1.213724e-06	2.462125e-06	3.779882e-06	-5.422522e+00	...	2	28780680	...	6.949106e-08
TCGA-BB-8601-01A-11D-2394-08	79	78	1	59	1.265823e-02	coding only	1	28836876	...	19	51	79	6.588786e-07	1.768569e-06	2.739548e-06	-5.562321e+00	...	8	28780680	...	2.779642e-07
TCGA-BB-A5HU-01A-11D-A28R-08	214	212	2	156	9.345794e-03	coding only	1	28836876	...	56	154	214	1.941958e-06	5.340384e-06	7.421054e-06	-5.129534e+00	...	2	28780680	...	6.949106e-08
TCGA-BB-A5HY-01A-11D-A28R-08	252	246	6	193	2.380952e-02	coding only	1	28836876	...	53	181	252	1.837924e-06	6.276685e-06	8.738811e-06	-5.058548e+00	...	12	28780680	...	4.169464e-07
TCGA-BB-A5HZ-01A-21D-A28R-08	94	91	3	62	3.191489e-02	coding only	1	28836876	...	29	49	94	1.005657e-06	1.699213e-06	3.259715e-06	-5.486820e+00	...	13	28780680	...	4.516919e-07
TCGA-BB-A6UM-01A-12D-A34J-08	80	79	1	56	1.250000e-02	coding only	1	28836876	...	23	56	80	7.975899e-07	1.941958e-06	2.774226e-06	-5.556858e+00	...	0	28780680	...	0
TCGA-BB-A6UO-01A-12D-A34J-08	130	129	1	96	7.692308e-03	coding only	1	28836876	...	33	84	130	1.144368e-06	2.912937e-06	4.508117e-06	-5.346005e+00	...	12	28780680	...	4.169464e-07
TCGA-C9-A47Z-01A-11D-A24D-08	119	116	3	87	2.521008e-02	coding only	1	28836876	...	29	81	119	1.005657e-06	2.808903e-06	4.126661e-06	-5.384401e+00	...	6	28780680	...	2.084732e-07
TCGA-C9-A480-01A-12D-A24D-08	61	60	1	40	1.639344e-02	coding only	1	28836876	...	20	38	61	6.935564e-07	1.317757e-06	2.115347e-06	-5.674618e+00	...	2	28780680	...	6.949106e-08
TCGA-CN-4723-01A-01D-1434-08	1060	1042	18	773	1.698113e-02	coding only	1	28836876	...	269	760	1060	9.328334e-06	2.635514e-05	3.675849e-05	-4.434642e+00	...	12	28780680	...	4.169464e-07
TCGA-CN-4725-01A-01D-1434-08	75	73	2	52	2.666667e-02	coding only	1	28836876	...	21	47	75	7.282342e-07	1.629858e-06	2.600837e-06	-5.584887e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-4726-01A-01D-1434-08	99	97	2	69	2.020202e-02	coding only	1	28836876	...	28	67	99	9.709790e-07	2.323414e-06	3.433104e-06	-5.464313e+00	...	2	28780680	...	6.949106e-08
TCGA-CN-4727-01A-01D-1434-08	512	506	6	392	1.171875e-02	coding only	1	28836876	...	114	372	512	3.953271e-06	1.290015e-05	1.775504e-05	-4.750678e+00	...	20	28780680	...	6.949106e-07
TCGA-CN-4728-01A-01D-1434-08	160	155	5	115	3.125000e-02	exome+100bp flanks	2	35881627	...	40	105	160	1.114777e-06	2.926289e-06	4.459107e-06	-5.350752e+00	...	10	32159724	...	3.109479e-07
TCGA-CN-4729-01A-01D-1434-08	178	173	5	122	2.808989e-02	coding only	1	28836876	...	51	112	178	1.768569e-06	3.883916e-06	6.172652e-06	-5.209528e+00	...	10	28780680	...	3.474553e-07
TCGA-CN-4730-01A-01D-1434-08	200	193	7	150	3.500000e-02	exome+100bp flanks	2	35881627	...	43	146	200	1.198385e-06	4.068935e-06	5.573883e-06	-5.253842e+00	...	4	32159724	...	1.243792e-07
TCGA-CN-4731-01A-01D-1434-08	147	143	4	100	2.721088e-02	coding only	1	28836876	...	43	89	147	1.491146e-06	3.086326e-06	5.097640e-06	-5.292631e+00	...	11	28780680	...	3.822008e-07
TCGA-CN-4733-01A-02D-1870-08	48	47	1	34	2.083333e-02	coding only	1	28836876	...	13	33	48	4.508117e-07	1.144368e-06	1.664535e-06	-5.778707e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-4734-01A-01D-1434-08	188	188	0	133	0	coding only	1	28836876	...	55	127	188	1.907280e-06	4.404083e-06	6.519430e-06	-5.185790e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-4735-01A-01D-1434-08	176	174	2	129	1.136364e-02	coding only	1	28836876	...	45	128	176	1.560502e-06	4.438761e-06	6.103296e-06	-5.214436e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-4736-01A-01D-1434-08	116	115	1	95	8.620690e-03	coding only	1	28836876	...	20	90	116	6.935564e-07	3.121004e-06	4.022627e-06	-5.395490e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-4737-01A-01D-1434-08	60	58	2	40	3.333333e-02	coding only	1	28836876	...	18	37	60	6.242008e-07	1.283079e-06	2.080669e-06	-5.681797e+00	...	3	28780680	...	1.042366e-07
TCGA-CN-4738-01A-02D-1512-08	133	131	2	96	1.503759e-02	coding only	1	28836876	...	35	92	133	1.213724e-06	3.190359e-06	4.612150e-06	-5.336097e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-4739-01A-02D-1512-08	253	250	3	188	1.185771e-02	coding only	1	28836876	...	62	181	253	2.150025e-06	6.276685e-06	8.773489e-06	-5.056828e+00	...	7	28780680	...	2.432187e-07
TCGA-CN-4740-01A-01D-1434-08	178	174	4	132	2.247191e-02	coding only	1	28836876	...	42	128	178	1.456468e-06	4.438761e-06	6.172652e-06	-5.209528e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-4741-01A-01D-1434-08	202	199	3	147	1.485149e-02	coding only	1	28836876	...	52	146	202	1.803247e-06	5.062962e-06	7.004920e-06	-5.154597e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-4742-01A-02D-1512-08	99	98	1	78	1.010101e-02	coding only	1	28836876	...	20	72	99	6.935564e-07	2.496803e-06	3.433104e-06	-5.464313e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-5355-01A-01D-1434-08	134	133	1	107	7.462687e-03	coding only	1	28836876	...	26	101	134	9.016233e-07	3.502460e-06	4.646828e-06	-5.332843e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-5356-01A-01D-1434-08	406	401	5	307	1.231527e-02	coding only	1	28836876	...	93	291	405	3.225037e-06	1.009125e-05	1.404452e-05	-4.852493e+00	...	16	28780680	...	5.559285e-07
TCGA-CN-5358-01A-01D-1512-08	67	66	1	53	1.492537e-02	coding only	1	28836876	...	13	51	67	4.508117e-07	1.768569e-06	2.323414e-06	-5.633873e+00	...	2	28780680	...	6.949106e-08
TCGA-CN-5359-01A-01D-1434-08	188	185	3	138	1.595745e-02	coding only	1	28836876	...	47	130	188	1.629858e-06	4.508117e-06	6.519430e-06	-5.185790e+00	...	8	28780680	...	2.779642e-07
TCGA-CN-5360-01A-01D-1434-08	582	570	12	440	2.061856e-02	coding only	1	28836876	...	130	421	580	4.508117e-06	1.459936e-05	2.011314e-05	-4.696520e+00	...	17	28780680	...	5.906740e-07
TCGA-CN-5361-01A-01D-1434-08	137	136	1	90	7.299270e-03	coding only	1	28836876	...	46	81	137	1.595180e-06	2.808903e-06	4.750861e-06	-5.323228e+00	...	9	28780680	...	3.127098e-07
TCGA-CN-5363-01A-01D-1434-08	222	222	0	163	0	coding only	1	28836876	...	59	149	222	2.045991e-06	5.166995e-06	7.698476e-06	-5.113595e+00	...	14	28780680	...	4.864374e-07
TCGA-CN-5364-01A-01D-1434-08	155	154	1	131	6.451613e-03	coding only	1	28836876	...	23	124	155	7.975899e-07	4.300050e-06	5.375062e-06	-5.269617e+00	...	7	28780680	...	2.432187e-07
TCGA-CN-5365-01A-01D-1434-08	104	101	3	78	2.884615e-02	coding only	1	28836876	...	23	72	104	7.975899e-07	2.496803e-06	3.606493e-06	-5.442915e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-5366-01A-01D-1434-08	124	121	3	97	2.419355e-02	coding only	1	28836876	...	24	88	124	8.322677e-07	3.051648e-06	4.300050e-06	-5.366527e+00	...	9	28780680	...	3.127098e-07
TCGA-CN-5367-01A-01D-1434-08	123	119	4	95	3.252033e-02	coding only	1	28836876	...	24	89	123	8.322677e-07	3.086326e-06	4.265372e-06	-5.370043e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-5369-01A-01D-1434-08	575	565	10	431	1.739130e-02	coding only	1	28836876	...	134	373	575	4.646828e-06	1.293483e-05	1.993975e-05	-4.700280e+00	...	57	28780680	...	1.980495e-06
TCGA-CN-5370-01A-01D-2012-08	125	124	1	98	8.000000e-03	coding only	1	28836876	...	26	91	125	9.016233e-07	3.155682e-06	4.334728e-06	-5.363038e+00	...	7	28780680	...	2.432187e-07
TCGA-CN-5373-01A-01D-1434-08	193	188	5	136	2.590674e-02	coding only	1	28836876	...	52	127	193	1.803247e-06	4.404083e-06	6.692819e-06	-5.174391e+00	...	9	28780680	...	3.127098e-07
TCGA-CN-5374-01A-01D-1434-08	210	204	6	147	2.857143e-02	coding only	1	28836876	...	57	146	210	1.976636e-06	5.062962e-06	7.282342e-06	-5.137729e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-6010-01A-11D-1683-08	182	181	1	136	5.494505e-03	coding only	1	28836876	...	45	131	182	1.560502e-06	4.542794e-06	6.311363e-06	-5.199877e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-6011-01A-11D-1683-08	416	409	7	307	1.682692e-02	coding only	1	28836876	...	102	301	416	3.537138e-06	1.043802e-05	1.442597e-05	-4.840855e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-6012-01A-11D-1683-08	138	135	3	109	2.173913e-02	coding only	1	28836876	...	26	103	138	9.016233e-07	3.571815e-06	4.785539e-06	-5.320069e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-6013-01A-11D-1683-08	221	220	1	170	4.524887e-03	coding only	1	28836876	...	50	170	221	1.733891e-06	5.895229e-06	7.663798e-06	-5.115556e+00	...	0	28780680	...	0
TCGA-CN-6016-01A-11D-1683-08	141	141	0	104	0	coding only	1	28836876	...	37	102	141	1.283079e-06	3.537138e-06	4.889573e-06	-5.310729e+00	...	2	28780680	...	6.949106e-08
TCGA-CN-6017-01A-11D-1683-08	9	9	0	7	0	coding only	1	28836876	...	2	6	9	6.935564e-08	2.080669e-07	3.121004e-07	-6.505706e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-6018-01A-11D-1683-08	137	135	2	96	1.459854e-02	coding only	1	28836876	...	39	89	137	1.352435e-06	3.086326e-06	4.750861e-06	-5.323228e+00	...	7	28780680	...	2.432187e-07
TCGA-CN-6019-01A-11D-1683-08	155	153	2	124	1.290323e-02	coding only	1	28836876	...	29	119	155	1.005657e-06	4.126661e-06	5.375062e-06	-5.269617e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-6020-01A-11D-1683-08	183	180	3	127	1.639344e-02	coding only	1	28836876	...	53	123	183	1.837924e-06	4.265372e-06	6.346041e-06	-5.197497e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-6021-01A-11D-1683-08	320	316	4	249	1.250000e-02	coding only	1	28836876	...	67	232	319	2.323414e-06	8.045254e-06	1.106222e-05	-4.956158e+00	...	16	28780680	...	5.559285e-07
TCGA-CN-6022-01A-21D-1683-08	94	93	1	65	1.063830e-02	coding only	1	28836876	...	28	64	94	9.709790e-07	2.219380e-06	3.259715e-06	-5.486820e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-6023-01A-11D-1683-08	124	124	0	104	0	coding only	1	28836876	...	20	98	124	6.935564e-07	3.398426e-06	4.300050e-06	-5.366527e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-6024-01A-11D-1683-08	206	204	2	132	9.708738e-03	coding only	1	28836876	...	72	124	206	2.496803e-06	4.300050e-06	7.143631e-06	-5.146081e+00	...	8	28780680	...	2.779642e-07
TCGA-CN-6988-01A-11D-1912-08	179	177	2	136	1.117318e-02	coding only	1	28836876	...	41	128	179	1.421791e-06	4.438761e-06	6.207330e-06	-5.207095e+00	...	8	28780680	...	2.779642e-07
TCGA-CN-6989-01A-11D-1912-08	121	120	1	90	8.264463e-03	coding only	1	28836876	...	30	84	121	1.040335e-06	2.912937e-06	4.196016e-06	-5.377163e+00	...	6	28780680	...	2.084732e-07
TCGA-CN-6992-01A-11D-1912-08	387	381	6	292	1.550388e-02	coding only	1	28836876	...	89	279	387	3.086326e-06	9.675112e-06	1.342032e-05	-4.872237e+00	...	12	28780680	...	4.169464e-07
TCGA-CN-6994-01A-11D-1912-08	140	135	5	100	3.571429e-02	exome+100bp flanks	2	35881627	...	35	97	140	9.754296e-07	2.703333e-06	3.901718e-06	-5.408744e+00	...	3	32159724	...	9.328438e-08
TCGA-CN-6995-01A-31D-2012-08	255	253	2	203	7.843137e-03	coding only	1	28836876	...	50	195	255	1.733891e-06	6.762175e-06	8.842844e-06	-5.053408e+00	...	8	28780680	...	2.779642e-07
TCGA-CN-6996-01A-11D-1912-08	65	63	2	48	3.076923e-02	coding only	1	28836876	...	15	47	65	5.201673e-07	1.629858e-06	2.254058e-06	-5.647035e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-6997-01A-11D-2012-08	160	158	2	129	1.250000e-02	coding only	1	28836876	...	29	119	160	1.005657e-06	4.126661e-06	5.548451e-06	-5.255828e+00	...	10	28780680	...	3.474553e-07
TCGA-CN-6998-01A-23D-2012-08	99	97	2	66	2.020202e-02	coding only	1	28836876	...	31	62	99	1.075012e-06	2.150025e-06	3.433104e-06	-5.464313e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-A497-01A-11D-A24D-08	396	391	5	305	1.262626e-02	coding only	1	28836876	...	86	289	396	2.982293e-06	1.002189e-05	1.373242e-05	-4.862253e+00	...	16	28780680	...	5.559285e-07
TCGA-CN-A498-01A-11D-A24D-08	136	131	5	101	3.676471e-02	exome+100bp flanks	2	35881627	...	30	96	136	8.360825e-07	2.675464e-06	3.790241e-06	-5.421333e+00	...	5	32159724	...	1.554740e-07
TCGA-CN-A499-01A-11D-A24D-08	51	48	3	37	5.882353e-02	coding only	1	28836876	...	11	32	51	3.814560e-07	1.109690e-06	1.768569e-06	-5.752378e+00	...	5	28780680	...	1.737277e-07
TCGA-CN-A49A-01A-11D-A24D-08	139	137	2	103	1.438849e-02	coding only	1	28836876	...	34	100	139	1.179046e-06	3.467782e-06	4.820217e-06	-5.316933e+00	...	3	28780680	...	1.042366e-07
TCGA-CN-A49B-01A-31D-A24D-08	121	116	5	91	4.132231e-02	exome+100bp flanks	2	35881627	...	25	89	121	6.967354e-07	2.480378e-06	3.372199e-06	-5.472087e+00	...	2	32159724	...	6.218959e-08
TCGA-CN-A49C-01A-11D-A24D-08	73	70	3	44	4.109589e-02	coding only	1	28836876	...	26	40	73	9.016233e-07	1.387113e-06	2.531481e-06	-5.596625e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-A63T-01A-11D-A28R-08	298	295	3	224	1.006711e-02	coding only	1	28836876	...	71	213	298	2.462125e-06	7.386376e-06	1.033399e-05	-4.985732e+00	...	11	28780680	...	3.822008e-07
TCGA-CN-A63U-01A-11D-A30E-08	620	610	10	471	1.612903e-02	coding only	1	28836876	...	139	440	619	4.820217e-06	1.525824e-05	2.146557e-05	-4.668258e+00	...	30	28780680	...	1.042366e-06
TCGA-CN-A63V-01A-11D-A28R-08	90	90	0	74	0	coding only	1	28836876	...	16	71	90	5.548451e-07	2.462125e-06	3.121004e-06	-5.505706e+00	...	3	28780680	...	1.042366e-07
TCGA-CN-A63W-01A-11D-A30E-08	465	456	9	348	1.935484e-02	coding only	1	28836876	...	108	330	464	3.745205e-06	1.144368e-05	1.609051e-05	-4.793430e+00	...	17	28780680	...	5.906740e-07
TCGA-CN-A63Y-01A-11D-A30E-08	209	201	8	138	3.827751e-02	exome+100bp flanks	2	35881627	...	63	134	209	1.755773e-06	3.734502e-06	5.824708e-06	-5.234726e+00	...	3	32159724	...	9.328438e-08
TCGA-CN-A640-01A-21D-A30E-08	93	92	1	73	1.075269e-02	coding only	1	28836876	...	19	65	93	6.588786e-07	2.254058e-06	3.225037e-06	-5.491465e+00	...	8	28780680	...	2.779642e-07
TCGA-CN-A641-01A-11D-A30E-08	259	256	3	192	1.158301e-02	coding only	1	28836876	...	64	183	259	2.219380e-06	6.346041e-06	8.981555e-06	-5.046648e+00	...	9	28780680	...	3.127098e-07
TCGA-CN-A642-01A-12D-A30E-08	108	105	3	84	2.777778e-02	coding only	1	28836876	...	21	80	108	7.282342e-07	2.774226e-06	3.745205e-06	-5.426524e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-A6UY-01A-12D-A34J-08	50	50	0	33	0	coding only	1	28836876	...	17	32	50	5.895229e-07	1.109690e-06	1.733891e-06	-5.760978e+00	...	1	28780680	...	3.474553e-08
TCGA-CN-A6V1-01A-12D-A34J-08	486	481	5	330	1.028807e-02	coding only	1	28836876	...	151	327	486	5.236351e-06	1.133965e-05	1.685342e-05	-4.773312e+00	...	2	28780680	...	6.949106e-08
TCGA-CN-A6V3-01A-12D-A34J-08	283	282	1	208	3.533569e-03	coding only	1	28836876	...	74	198	283	2.566159e-06	6.866208e-06	9.813823e-06	-5.008162e+00	...	10	28780680	...	3.474553e-07
TCGA-CN-A6V6-01A-12D-A34J-08	98	98	0	71	0	coding only	1	28836876	...	27	66	98	9.363011e-07	2.288736e-06	3.398426e-06	-5.468722e+00	...	4	28780680	...	1.389821e-07
TCGA-CN-A6V7-01A-12D-A34J-08	64	63	1	43	1.562500e-02	coding only	1	28836876	...	20	42	64	6.935564e-07	1.456468e-06	2.219380e-06	-5.653768e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-5323-01A-01D-1683-08	86	85	1	65	1.162791e-02	coding only	1	28836876	...	20	59	86	6.935564e-07	2.045991e-06	2.982293e-06	-5.525450e+00	...	6	28780680	...	2.084732e-07
TCGA-CQ-5324-01A-01D-1683-08	83	82	1	67	1.204819e-02	coding only	1	28836876	...	15	62	83	5.201673e-07	2.150025e-06	2.878259e-06	-5.540870e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-5325-01A-01D-1683-08	66	66	0	53	0	coding only	1	28836876	...	13	52	66	4.508117e-07	1.803247e-06	2.288736e-06	-5.640404e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-5326-01A-01D-1870-08	262	260	2	181	7.633588e-03	coding only	1	28836876	...	79	178	262	2.739548e-06	6.172652e-06	9.085589e-06	-5.041647e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-5327-01A-01D-1683-08	271	266	5	200	1.845018e-02	coding only	1	28836876	...	66	187	271	2.288736e-06	6.484752e-06	9.397689e-06	-5.026979e+00	...	13	28780680	...	4.516919e-07
TCGA-CQ-5329-01A-01D-1683-08	41	41	0	32	0	coding only	1	28836876	...	9	30	41	3.121004e-07	1.040335e-06	1.421791e-06	-5.847164e+00	...	2	28780680	...	6.949106e-08
TCGA-CQ-5330-01A-01D-1683-08	80	79	1	60	1.250000e-02	coding only	1	28836876	...	19	58	80	6.588786e-07	2.011314e-06	2.774226e-06	-5.556858e+00	...	2	28780680	...	6.949106e-08
TCGA-CQ-5331-01A-02D-1870-08	170	161	9	126	5.294118e-02	exome+100bp flanks	2	35881627	...	35	124	170	9.754296e-07	3.455808e-06	4.737801e-06	-5.324423e+00	...	2	32159724	...	6.218959e-08
TCGA-CQ-5332-01A-01D-1683-08	168	162	6	123	3.571429e-02	exome+100bp flanks	2	35881627	...	39	117	168	1.086907e-06	3.260722e-06	4.682062e-06	-5.329563e+00	...	6	32159724	...	1.865688e-07
TCGA-CQ-5333-01A-01D-2394-08	244	242	2	179	8.196721e-03	coding only	1	28836876	...	63	174	244	2.184703e-06	6.033941e-06	8.461388e-06	-5.072558e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-5334-01A-01D-1683-08	220	218	2	167	9.090909e-03	coding only	1	28836876	...	51	156	220	1.768569e-06	5.409740e-06	7.629120e-06	-5.117526e+00	...	11	28780680	...	3.822008e-07
TCGA-CQ-6218-01A-11D-1912-08	160	158	2	107	1.250000e-02	coding only	1	28836876	...	51	102	160	1.768569e-06	3.537138e-06	5.548451e-06	-5.255828e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-6219-01A-11D-1912-08	86	86	0	63	0	coding only	1	28836876	...	23	60	86	7.975899e-07	2.080669e-06	2.982293e-06	-5.525450e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-6220-01A-11D-1912-08	135	134	1	101	7.407407e-03	coding only	1	28836876	...	33	99	135	1.144368e-06	3.433104e-06	4.681506e-06	-5.329614e+00	...	2	28780680	...	6.949106e-08
TCGA-CQ-6221-01A-11D-2078-08	132	129	3	104	2.272727e-02	coding only	1	28836876	...	25	93	132	8.669455e-07	3.225037e-06	4.577472e-06	-5.339374e+00	...	11	28780680	...	3.822008e-07
TCGA-CQ-6222-01A-11D-1912-08	77	76	1	59	1.298701e-02	coding only	1	28836876	...	17	56	77	5.895229e-07	1.941958e-06	2.670192e-06	-5.573457e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-6223-01A-11D-1912-08	105	104	1	78	9.523810e-03	coding only	1	28836876	...	26	77	105	9.016233e-07	2.670192e-06	3.641171e-06	-5.438759e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-6224-01A-11D-1912-08	88	87	1	58	1.136364e-02	coding only	1	28836876	...	29	57	88	1.005657e-06	1.976636e-06	3.051648e-06	-5.515466e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-6225-01A-11D-1912-08	184	182	2	141	1.086957e-02	coding only	1	28836876	...	41	123	184	1.421791e-06	4.265372e-06	6.380719e-06	-5.195130e+00	...	18	28780680	...	6.254196e-07
TCGA-CQ-6227-01A-11D-1912-08	54	51	3	38	5.555556e-02	coding only	1	28836876	...	13	36	53	4.508117e-07	1.248402e-06	1.837924e-06	-5.735672e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-6228-01A-11D-1912-08	121	120	1	100	8.264463e-03	coding only	1	28836876	...	20	98	121	6.935564e-07	3.398426e-06	4.196016e-06	-5.377163e+00	...	2	28780680	...	6.949106e-08
TCGA-CQ-6229-01A-11D-1912-08	36	35	1	25	2.777778e-02	coding only	1	28836876	...	10	21	36	3.467782e-07	7.282342e-07	1.248402e-06	-5.903646e+00	...	4	28780680	...	1.389821e-07
TCGA-CQ-7063-01A-11D-2394-08	158	156	2	118	1.265823e-02	coding only	1	28836876	...	38	115	158	1.317757e-06	3.987949e-06	5.479096e-06	-5.261291e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-7064-01A-11D-2394-08	125	124	1	93	8.000000e-03	coding only	1	28836876	...	31	90	125	1.075012e-06	3.121004e-06	4.334728e-06	-5.363038e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-7065-01A-11D-2078-08	39	39	0	27	0	coding only	1	28836876	...	12	25	39	4.161338e-07	8.669455e-07	1.352435e-06	-5.868884e+00	...	2	28780680	...	6.949106e-08
TCGA-CQ-7067-01A-11D-2229-08	86	82	4	68	4.651163e-02	coding only	1	28836876	...	14	65	86	4.854895e-07	2.254058e-06	2.982293e-06	-5.525450e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-7068-01A-11D-2078-08	127	125	2	88	1.574803e-02	coding only	1	28836876	...	37	82	126	1.283079e-06	2.843581e-06	4.369405e-06	-5.359578e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-7069-01A-11D-2394-08	106	106	0	85	0	coding only	1	28836876	...	21	82	106	7.282342e-07	2.843581e-06	3.675849e-06	-5.434642e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-7071-01A-12D-A30E-08	543	531	12	425	2.209945e-02	coding only	1	28836876	...	106	410	543	3.675849e-06	1.421791e-05	1.883006e-05	-4.725148e+00	...	15	28780680	...	5.211830e-07
TCGA-CQ-7072-01A-21D-A30E-08	145	142	3	120	2.068966e-02	coding only	1	28836876	...	22	116	145	7.629120e-07	4.022627e-06	5.028284e-06	-5.298580e+00	...	4	28780680	...	1.389821e-07
TCGA-CQ-A4C6-01A-11D-A25D-08	121	117	4	93	3.305785e-02	coding only	1	28836876	...	24	93	121	8.322677e-07	3.225037e-06	4.196016e-06	-5.377163e+00	...	0	28780680	...	0
TCGA-CQ-A4C7-01A-11D-A25D-08	73	71	2	54	2.739726e-02	coding only	1	28836876	...	17	49	73	5.895229e-07	1.699213e-06	2.531481e-06	-5.596625e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-A4C9-01A-11D-A25D-08	116	114	2	84	1.724138e-02	coding only	1	28836876	...	30	81	116	1.040335e-06	2.808903e-06	4.022627e-06	-5.395490e+00	...	3	28780680	...	1.042366e-07
TCGA-CQ-A4CB-01A-11D-A25D-08	104	101	3	86	2.884615e-02	coding only	1	28836876	...	15	82	104	5.201673e-07	2.843581e-06	3.606493e-06	-5.442915e+00	...	4	28780680	...	1.389821e-07
TCGA-CQ-A4CD-01A-21D-A25D-08	169	167	2	139	1.183432e-02	coding only	1	28836876	...	28	133	169	9.709790e-07	4.612150e-06	5.860552e-06	-5.232062e+00	...	6	28780680	...	2.084732e-07
TCGA-CQ-A4CE-01A-11D-A25Y-08	87	85	2	61	2.298851e-02	coding only	1	28836876	...	24	56	87	8.322677e-07	1.941958e-06	3.016970e-06	-5.520429e+00	...	5	28780680	...	1.737277e-07
TCGA-CQ-A4CG-01A-11D-A25Y-08	90	87	3	68	3.333333e-02	coding only	1	28836876	...	19	64	90	6.588786e-07	2.219380e-06	3.121004e-06	-5.505706e+00	...	4	28780680	...	1.389821e-07
TCGA-CQ-A4CH-01A-11D-A25Y-08	33	30	3	21	9.090909e-02	coding only	1	28836876	...	9	20	33	3.121004e-07	6.935564e-07	1.144368e-06	-5.941434e+00	...	1	28780680	...	3.474553e-08
TCGA-CQ-A4CI-01A-11D-A25Y-08	116	115	1	88	8.620690e-03	coding only	1	28836876	...	27	82	116	9.363011e-07	2.843581e-06	4.022627e-06	-5.395490e+00	...	6	28780680	...	2.084732e-07
TCGA-CR-5243-01A-01D-1512-08	86	85	1	64	1.162791e-02	coding only	1	28836876	...	21	62	86	7.282342e-07	2.150025e-06	2.982293e-06	-5.525450e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-5247-01A-01D-2012-08	90	89	1	69	1.111111e-02	coding only	1	28836876	...	20	60	90	6.935564e-07	2.080669e-06	3.121004e-06	-5.505706e+00	...	9	28780680	...	3.127098e-07
TCGA-CR-5248-01A-01D-2012-08	395	388	7	300	1.772152e-02	coding only	1	28836876	...	88	280	394	3.051648e-06	9.709790e-06	1.366306e-05	-4.864452e+00	...	19	28780680	...	6.601651e-07
TCGA-CR-5249-01A-01D-1512-08	59	58	1	38	1.694915e-02	coding only	1	28836876	...	20	35	59	6.935564e-07	1.213724e-06	2.045991e-06	-5.689096e+00	...	3	28780680	...	1.042366e-07
TCGA-CR-5250-01A-01D-1512-08	39	38	1	31	2.564103e-02	coding only	1	28836876	...	7	27	39	2.427447e-07	9.363011e-07	1.352435e-06	-5.868884e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-6467-01A-11D-1870-08	61	61	0	42	0	coding only	1	28836876	...	19	39	61	6.588786e-07	1.352435e-06	2.115347e-06	-5.674618e+00	...	3	28780680	...	1.042366e-07
TCGA-CR-6470-01A-11D-1870-08	49	49	0	39	0	coding only	1	28836876	...	10	37	49	3.467782e-07	1.283079e-06	1.699213e-06	-5.769752e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-6471-01A-11D-1870-08	163	160	3	119	1.840491e-02	coding only	1	28836876	...	41	112	163	1.421791e-06	3.883916e-06	5.652485e-06	-5.247761e+00	...	7	28780680	...	2.432187e-07
TCGA-CR-6472-01A-11D-1870-08	540	530	10	400	1.851852e-02	coding only	1	28836876	...	130	389	539	4.508117e-06	1.348967e-05	1.869135e-05	-4.728359e+00	...	11	28780680	...	3.822008e-07
TCGA-CR-6473-01A-11D-1870-08	111	108	3	83	2.702703e-02	coding only	1	28836876	...	25	79	111	8.669455e-07	2.739548e-06	3.849238e-06	-5.414625e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-6474-01A-11D-1870-08	136	132	4	103	2.941176e-02	coding only	1	28836876	...	29	99	136	1.005657e-06	3.433104e-06	4.716184e-06	-5.326409e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-6477-01A-11D-1870-08	103	100	3	76	2.912621e-02	coding only	1	28836876	...	24	66	103	8.322677e-07	2.288736e-06	3.571815e-06	-5.447111e+00	...	10	28780680	...	3.474553e-07
TCGA-CR-6478-01A-11D-1870-08	152	149	3	96	1.973684e-02	coding only	1	28836876	...	53	94	152	1.837924e-06	3.259715e-06	5.271029e-06	-5.278105e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-6480-01A-11D-1870-08	133	131	2	92	1.503759e-02	coding only	1	28836876	...	39	89	133	1.352435e-06	3.086326e-06	4.612150e-06	-5.336097e+00	...	3	28780680	...	1.042366e-07
TCGA-CR-6481-01A-11D-1870-08	570	554	16	426	2.807018e-02	coding only	1	28836876	...	128	424	570	4.438761e-06	1.470340e-05	1.976636e-05	-4.704073e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-6482-01A-11D-1870-08	56	56	0	39	0	coding only	1	28836876	...	17	39	56	5.895229e-07	1.352435e-06	1.941958e-06	-5.711760e+00	...	0	28780680	...	0
TCGA-CR-6484-01A-11D-1870-08	329	326	3	243	9.118541e-03	coding only	1	28836876	...	83	241	329	2.878259e-06	8.357355e-06	1.140900e-05	-4.942752e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-6487-01A-11D-1870-08	153	149	4	119	2.614379e-02	coding only	1	28836876	...	30	115	153	1.040335e-06	3.987949e-06	5.305706e-06	-5.275257e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-6488-01A-12D-2078-08	45	45	0	35	0	coding only	1	28836876	...	10	34	45	3.467782e-07	1.179046e-06	1.560502e-06	-5.806736e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-6491-01A-11D-1870-08	177	176	1	122	5.649718e-03	coding only	1	28836876	...	54	115	177	1.872602e-06	3.987949e-06	6.137974e-06	-5.211975e+00	...	7	28780680	...	2.432187e-07
TCGA-CR-6492-01A-12D-2078-08	74	72	2	54	2.702703e-02	coding only	1	28836876	...	18	53	74	6.242008e-07	1.837924e-06	2.566159e-06	-5.590716e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-6493-01A-11D-1870-08	44	43	1	35	2.272727e-02	coding only	1	28836876	...	8	32	44	2.774226e-07	1.109690e-06	1.525824e-06	-5.816496e+00	...	3	28780680	...	1.042366e-07
TCGA-CR-7364-01A-11D-2012-08	523	515	8	398	1.529637e-02	coding only	1	28836876	...	117	378	521	4.057305e-06	1.310822e-05	1.806714e-05	-4.743110e+00	...	18	28780680	...	6.254196e-07
TCGA-CR-7365-01A-11D-2012-08	193	190	3	145	1.554404e-02	coding only	1	28836876	...	45	134	193	1.560502e-06	4.646828e-06	6.692819e-06	-5.174391e+00	...	11	28780680	...	3.822008e-07
TCGA-CR-7367-01A-11D-2012-08	208	205	3	157	1.442308e-02	coding only	1	28836876	...	48	148	207	1.664535e-06	5.132317e-06	7.178309e-06	-5.143978e+00	...	8	28780680	...	2.779642e-07
TCGA-CR-7368-01A-11D-2129-08	246	241	5	182	2.032520e-02	coding only	1	28836876	...	58	172	245	2.011314e-06	5.964585e-06	8.496066e-06	-5.070782e+00	...	10	28780680	...	3.474553e-07
TCGA-CR-7369-01A-11D-2129-08	86	84	2	66	2.325581e-02	coding only	1	28836876	...	18	61	86	6.242008e-07	2.115347e-06	2.982293e-06	-5.525450e+00	...	5	28780680	...	1.737277e-07
TCGA-CR-7370-01A-11D-2129-08	621	616	5	451	8.051530e-03	coding only	1	28836876	...	165	431	620	5.721840e-06	1.494614e-05	2.150025e-05	-4.667557e+00	...	19	28780680	...	6.601651e-07
TCGA-CR-7371-01A-11D-2012-08	344	338	6	254	1.744186e-02	coding only	1	28836876	...	84	248	344	2.912937e-06	8.600099e-06	1.192917e-05	-4.923390e+00	...	6	28780680	...	2.084732e-07
TCGA-CR-7372-01A-11D-2012-08	59	57	2	44	3.389831e-02	coding only	1	28836876	...	13	40	59	4.508117e-07	1.387113e-06	2.045991e-06	-5.689096e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-7373-01A-11D-2012-08	138	137	1	95	7.246377e-03	coding only	1	28836876	...	42	90	138	1.456468e-06	3.121004e-06	4.785539e-06	-5.320069e+00	...	5	28780680	...	1.737277e-07
TCGA-CR-7374-01A-11D-2012-08	413	405	8	318	1.937046e-02	coding only	1	28836876	...	87	308	413	3.016970e-06	1.068077e-05	1.432194e-05	-4.843998e+00	...	10	28780680	...	3.474553e-07
TCGA-CR-7376-01A-11D-2129-08	69	69	0	55	0	coding only	1	28836876	...	14	53	69	4.854895e-07	1.837924e-06	2.392770e-06	-5.621099e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-7377-01A-11D-2012-08	151	149	2	107	1.324503e-02	coding only	1	28836876	...	42	105	151	1.456468e-06	3.641171e-06	5.236351e-06	-5.280971e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-7379-01A-11D-2012-08	171	171	0	116	0	coding only	1	28836876	...	55	111	171	1.907280e-06	3.849238e-06	5.929907e-06	-5.226952e+00	...	4	28780680	...	1.389821e-07
TCGA-CR-7380-01A-11D-2012-08	113	113	0	89	0	coding only	1	28836876	...	24	79	113	8.322677e-07	2.739548e-06	3.918594e-06	-5.406870e+00	...	10	28780680	...	3.474553e-07
TCGA-CR-7382-01A-11D-2129-08	100	99	1	76	1.000000e-02	coding only	1	28836876	...	23	73	100	7.975899e-07	2.531481e-06	3.467782e-06	-5.459948e+00	...	3	28780680	...	1.042366e-07
TCGA-CR-7383-01A-11D-2129-08	144	142	2	111	1.388889e-02	coding only	1	28836876	...	31	98	144	1.075012e-06	3.398426e-06	4.993606e-06	-5.301586e+00	...	12	28780680	...	4.169464e-07
TCGA-CR-7385-01A-11D-2012-08	55	55	0	43	0	coding only	1	28836876	...	12	41	55	4.161338e-07	1.421791e-06	1.907280e-06	-5.719586e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-7386-01A-11D-2012-08	219	218	1	158	4.566210e-03	coding only	1	28836876	...	60	155	218	2.080669e-06	5.375062e-06	7.559765e-06	-5.121492e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-7388-01A-11D-2012-08	832	819	13	632	1.562500e-02	coding only	1	28836876	...	187	615	832	6.484752e-06	2.132686e-05	2.885195e-05	-4.539825e+00	...	17	28780680	...	5.906740e-07
TCGA-CR-7389-01A-11D-2012-08	131	130	1	95	7.633588e-03	coding only	1	28836876	...	35	90	131	1.213724e-06	3.121004e-06	4.542794e-06	-5.342677e+00	...	5	28780680	...	1.737277e-07
TCGA-CR-7390-01A-11D-2012-08	163	161	2	109	1.226994e-02	coding only	1	28836876	...	52	103	163	1.803247e-06	3.571815e-06	5.652485e-06	-5.247761e+00	...	6	28780680	...	2.084732e-07
TCGA-CR-7391-01A-11D-2012-08	12	12	0	10	0	coding only	1	28836876	...	2	9	12	6.935564e-08	3.121004e-07	4.161338e-07	-6.380767e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-7392-01A-11D-2012-08	39	39	0	32	0	coding only	1	28836876	...	7	30	39	2.427447e-07	1.040335e-06	1.352435e-06	-5.868884e+00	...	2	28780680	...	6.949106e-08
TCGA-CR-7393-01A-11D-2012-08	4	4	0	3	0	coding only	1	28836876	...	1	2	4	3.467782e-08	6.935564e-08	1.387113e-07	-6.857888e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-7394-01A-11D-2012-08	213	210	3	148	1.408451e-02	coding only	1	28836876	...	62	148	213	2.150025e-06	5.132317e-06	7.386376e-06	-5.131569e+00	...	0	28780680	...	0
TCGA-CR-7395-01A-11D-2012-08	206	203	3	141	1.456311e-02	coding only	1	28836876	...	62	134	206	2.150025e-06	4.646828e-06	7.143631e-06	-5.146081e+00	...	7	28780680	...	2.432187e-07
TCGA-CR-7397-01A-11D-2012-08	54	54	0	39	0	coding only	1	28836876	...	15	39	54	5.201673e-07	1.352435e-06	1.872602e-06	-5.727554e+00	...	0	28780680	...	0
TCGA-CR-7398-01A-11D-2012-08	393	388	5	290	1.272265e-02	coding only	1	28836876	...	98	273	393	3.398426e-06	9.467045e-06	1.362838e-05	-4.865556e+00	...	17	28780680	...	5.906740e-07
TCGA-CR-7399-01A-11D-2012-08	320	312	8	249	2.500000e-02	coding only	1	28836876	...	62	239	319	2.150025e-06	8.287999e-06	1.106222e-05	-4.956158e+00	...	10	28780680	...	3.474553e-07
TCGA-CR-7401-01A-11D-2012-08	105	104	1	70	9.523810e-03	coding only	1	28836876	...	34	69	105	1.179046e-06	2.392770e-06	3.641171e-06	-5.438759e+00	...	1	28780680	...	3.474553e-08
TCGA-CR-7402-01A-11D-2012-08	1095	1084	11	841	1.004566e-02	coding only	1	28836876	...	241	802	1093	8.357355e-06	2.781161e-05	3.790286e-05	-4.421328e+00	...	39	28780680	...	1.355076e-06
TCGA-CR-7404-01A-11D-2129-08	143	140	3	102	2.097902e-02	coding only	1	28836876	...	38	98	143	1.317757e-06	3.398426e-06	4.958928e-06	-5.304612e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-5430-01A-02D-1683-08	183	176	7	131	3.825137e-02	exome+100bp flanks	2	35881627	...	45	120	183	1.254124e-06	3.344330e-06	5.100103e-06	-5.292421e+00	...	11	32159724	...	3.420427e-07
TCGA-CV-5431-01A-01D-1512-08	103	101	2	73	1.941748e-02	coding only	1	28836876	...	28	69	103	9.709790e-07	2.392770e-06	3.571815e-06	-5.447111e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-5432-01A-02D-1683-08	319	314	5	229	1.567398e-02	coding only	1	28836876	...	85	223	319	2.947615e-06	7.733154e-06	1.106222e-05	-4.956158e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-5434-01A-01D-1683-08	171	170	1	137	5.847953e-03	coding only	1	28836876	...	33	129	171	1.144368e-06	4.473439e-06	5.929907e-06	-5.226952e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-5435-01A-01D-1683-08	138	133	5	96	3.623188e-02	exome+100bp flanks	2	35881627	...	37	89	138	1.031168e-06	2.480378e-06	3.845979e-06	-5.414993e+00	...	7	32159724	...	2.176636e-07
TCGA-CV-5436-01A-01D-1512-08	124	122	2	92	1.612903e-02	coding only	1	28836876	...	30	82	124	1.040335e-06	2.843581e-06	4.300050e-06	-5.366527e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-5439-01A-01D-1683-08	126	125	1	90	7.936508e-03	coding only	1	28836876	...	35	84	126	1.213724e-06	2.912937e-06	4.369405e-06	-5.359578e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-5440-01A-01D-1512-08	137	135	2	102	1.459854e-02	coding only	1	28836876	...	33	95	137	1.144368e-06	3.294393e-06	4.750861e-06	-5.323228e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-5441-01A-01D-1512-08	435	430	5	327	1.149425e-02	coding only	1	28836876	...	103	307	435	3.571815e-06	1.064609e-05	1.508485e-05	-4.821459e+00	...	20	28780680	...	6.949106e-07
TCGA-CV-5442-01A-01D-1512-08	279	277	2	222	7.168459e-03	coding only	1	28836876	...	55	216	279	1.907280e-06	7.490409e-06	9.675112e-06	-5.014344e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-5443-01A-01D-1512-08	71	70	1	47	1.408451e-02	coding only	1	28836876	...	23	45	71	7.975899e-07	1.560502e-06	2.462125e-06	-5.608690e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-5444-01A-02D-1512-08	161	157	4	110	2.484472e-02	coding only	1	28836876	...	47	106	161	1.629858e-06	3.675849e-06	5.583129e-06	-5.253122e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-5966-01A-11D-1683-08	131	128	3	99	2.290076e-02	coding only	1	28836876	...	29	96	131	1.005657e-06	3.329071e-06	4.542794e-06	-5.342677e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-5970-01A-11D-1683-08	234	230	4	170	1.709402e-02	coding only	1	28836876	...	60	166	234	2.080669e-06	5.756518e-06	8.114610e-06	-5.090732e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-5971-01A-11D-1683-08	34	34	0	21	0	coding only	1	28836876	...	13	21	34	4.508117e-07	7.282342e-07	1.179046e-06	-5.928469e+00	...	0	28780680	...	0
TCGA-CV-5973-01A-11D-1683-08	77	77	0	52	0	coding only	1	28836876	...	25	44	77	8.669455e-07	1.525824e-06	2.670192e-06	-5.573457e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-5976-01A-11D-1683-08	93	92	1	67	1.075269e-02	coding only	1	28836876	...	25	63	93	8.669455e-07	2.184703e-06	3.225037e-06	-5.491465e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-5977-01A-11D-1683-08	114	114	0	77	0	coding only	1	28836876	...	37	74	114	1.283079e-06	2.566159e-06	3.953271e-06	-5.403043e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-5978-01A-11D-1683-08	206	204	2	160	9.708738e-03	coding only	1	28836876	...	44	155	206	1.525824e-06	5.375062e-06	7.143631e-06	-5.146081e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-5979-01A-11D-1683-08	43	43	0	35	0	coding only	1	28836876	...	8	35	43	2.774226e-07	1.213724e-06	1.491146e-06	-5.826480e+00	...	0	28780680	...	0
TCGA-CV-6003-01A-11D-1683-08	124	123	1	98	8.064516e-03	coding only	1	28836876	...	25	88	124	8.669455e-07	3.051648e-06	4.300050e-06	-5.366527e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-6433-01A-11D-1683-08	71	71	0	54	0	coding only	1	28836876	...	17	50	71	5.895229e-07	1.733891e-06	2.462125e-06	-5.608690e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-6436-01A-11D-1683-08	90	90	0	69	0	coding only	1	28836876	...	21	66	90	7.282342e-07	2.288736e-06	3.121004e-06	-5.505706e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-6441-01A-11D-1683-08	269	264	5	196	1.858736e-02	coding only	1	28836876	...	68	183	269	2.358092e-06	6.346041e-06	9.328334e-06	-5.030196e+00	...	13	28780680	...	4.516919e-07
TCGA-CV-6933-01A-11D-1912-08	138	135	3	104	2.173913e-02	coding only	1	28836876	...	31	100	138	1.075012e-06	3.467782e-06	4.785539e-06	-5.320069e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-6934-01A-11D-1912-08	112	109	3	83	2.678571e-02	coding only	1	28836876	...	26	77	112	9.016233e-07	2.670192e-06	3.883916e-06	-5.410730e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-6935-01A-11D-1912-08	255	249	6	197	2.352941e-02	coding only	1	28836876	...	52	187	254	1.803247e-06	6.484752e-06	8.808166e-06	-5.055114e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-6936-01A-11D-1912-08	320	319	1	235	3.125000e-03	coding only	1	28836876	...	84	228	320	2.912937e-06	7.906543e-06	1.109690e-05	-4.954798e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6937-01A-11D-2012-08	156	152	4	114	2.564103e-02	coding only	1	28836876	...	38	107	156	1.317757e-06	3.710527e-06	5.409740e-06	-5.266824e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6938-01A-11D-1912-08	171	169	2	138	1.169591e-02	coding only	1	28836876	...	31	126	171	1.075012e-06	4.369405e-06	5.929907e-06	-5.226952e+00	...	12	28780680	...	4.169464e-07
TCGA-CV-6939-01A-11D-1912-08	56	53	3	41	5.357143e-02	coding only	1	28836876	...	12	33	56	4.161338e-07	1.144368e-06	1.941958e-06	-5.711760e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6940-01A-11D-1912-08	152	152	0	112	0	coding only	1	28836876	...	40	108	152	1.387113e-06	3.745205e-06	5.271029e-06	-5.278105e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-6941-01A-11D-1912-08	166	160	6	118	3.614458e-02	exome+100bp flanks	2	35881627	...	42	112	166	1.170515e-06	3.121375e-06	4.626323e-06	-5.334764e+00	...	6	32159724	...	1.865688e-07
TCGA-CV-6942-01A-21D-2012-08	262	259	3	199	1.145038e-02	coding only	1	28836876	...	60	192	262	2.080669e-06	6.658141e-06	9.085589e-06	-5.041647e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6943-01A-11D-1912-08	75	74	1	56	1.333333e-02	coding only	1	28836876	...	18	53	75	6.242008e-07	1.837924e-06	2.600837e-06	-5.584887e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-6945-01A-11D-1912-08	150	148	2	108	1.333333e-02	coding only	1	28836876	...	40	100	150	1.387113e-06	3.467782e-06	5.201673e-06	-5.283857e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-6948-01A-11D-1912-08	234	231	3	174	1.282051e-02	coding only	1	28836876	...	57	161	234	1.976636e-06	5.583129e-06	8.114610e-06	-5.090732e+00	...	13	28780680	...	4.516919e-07
TCGA-CV-6950-01A-11D-1912-08	69	67	2	51	2.898551e-02	coding only	1	28836876	...	16	48	69	5.548451e-07	1.664535e-06	2.392770e-06	-5.621099e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-6951-01A-11D-1912-08	155	152	3	116	1.935484e-02	coding only	1	28836876	...	36	108	155	1.248402e-06	3.745205e-06	5.375062e-06	-5.269617e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-6952-01A-11D-1912-08	199	198	1	149	5.025126e-03	coding only	1	28836876	...	49	138	199	1.699213e-06	4.785539e-06	6.900886e-06	-5.161095e+00	...	11	28780680	...	3.822008e-07
TCGA-CV-6953-01A-11D-1912-08	120	119	1	95	8.333333e-03	coding only	1	28836876	...	24	94	120	8.322677e-07	3.259715e-06	4.161338e-06	-5.380767e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-6954-01A-11D-1912-08	188	183	5	141	2.659574e-02	coding only	1	28836876	...	42	135	187	1.456468e-06	4.681506e-06	6.484752e-06	-5.188107e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-6955-01A-11D-2012-08	153	151	2	113	1.307190e-02	coding only	1	28836876	...	38	105	153	1.317757e-06	3.641171e-06	5.305706e-06	-5.275257e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-6956-01A-21D-2012-08	225	221	4	156	1.777778e-02	coding only	1	28836876	...	65	149	225	2.254058e-06	5.166995e-06	7.802510e-06	-5.107766e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6959-01A-11D-1912-08	76	73	3	53	3.947368e-02	coding only	1	28836876	...	20	48	76	6.935564e-07	1.664535e-06	2.635514e-06	-5.579135e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-6960-01A-41D-2012-08	204	203	1	155	4.901961e-03	coding only	1	28836876	...	48	140	204	1.664535e-06	4.854895e-06	7.074275e-06	-5.150318e+00	...	15	28780680	...	5.211830e-07
TCGA-CV-6961-01A-21D-1912-08	685	674	11	501	1.605839e-02	coding only	1	28836876	...	173	493	685	5.999263e-06	1.709617e-05	2.375431e-05	-4.624258e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-6962-01A-11D-1912-08	170	169	1	143	5.882353e-03	coding only	1	28836876	...	26	127	170	9.016233e-07	4.404083e-06	5.895229e-06	-5.229499e+00	...	16	28780680	...	5.559285e-07
TCGA-CV-7089-01A-11D-2012-08	193	189	4	146	2.072539e-02	coding only	1	28836876	...	43	139	193	1.491146e-06	4.820217e-06	6.692819e-06	-5.174391e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7090-01A-11D-2012-08	58	56	2	41	3.448276e-02	coding only	1	28836876	...	15	39	58	5.201673e-07	1.352435e-06	2.011314e-06	-5.696520e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7091-01A-11D-2012-08	157	155	2	120	1.273885e-02	coding only	1	28836876	...	35	111	157	1.213724e-06	3.849238e-06	5.444418e-06	-5.264049e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-7095-01A-21D-2012-08	279	274	5	207	1.792115e-02	coding only	1	28836876	...	67	202	279	2.323414e-06	7.004920e-06	9.675112e-06	-5.014344e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7097-01A-11D-2012-08	110	108	2	76	1.818182e-02	coding only	1	28836876	...	32	68	110	1.109690e-06	2.358092e-06	3.814560e-06	-5.418556e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-7099-01A-41D-2012-08	349	345	4	254	1.146132e-02	coding only	1	28836876	...	91	244	349	3.155682e-06	8.461388e-06	1.210256e-05	-4.917123e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-7100-01A-11D-2012-08	21	20	1	16	4.761905e-02	coding only	1	28836876	...	4	9	21	1.387113e-07	3.121004e-07	7.282342e-07	-6.137729e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7101-01A-11D-2012-08	231	227	4	174	1.731602e-02	coding only	1	28836876	...	53	164	231	1.837924e-06	5.687163e-06	8.010576e-06	-5.096336e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-7102-01A-11D-2012-08	167	163	4	127	2.395210e-02	coding only	1	28836876	...	36	124	167	1.248402e-06	4.300050e-06	5.791196e-06	-5.237232e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-7103-01A-21D-2012-08	56	54	2	41	3.571429e-02	coding only	1	28836876	...	13	34	56	4.508117e-07	1.179046e-06	1.941958e-06	-5.711760e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7104-01A-11D-2012-08	121	117	4	91	3.305785e-02	coding only	1	28836876	...	26	82	121	9.016233e-07	2.843581e-06	4.196016e-06	-5.377163e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-7177-01A-11D-2012-08	145	140	5	106	3.448276e-02	exome+100bp flanks	2	35881627	...	34	95	145	9.475602e-07	2.647595e-06	4.041065e-06	-5.393504e+00	...	11	32159724	...	3.420427e-07
TCGA-CV-7178-01A-21D-2012-08	138	137	1	100	7.246377e-03	coding only	1	28836876	...	37	94	138	1.283079e-06	3.259715e-06	4.785539e-06	-5.320069e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7180-01A-11D-2012-08	78	77	1	58	1.282051e-02	coding only	1	28836876	...	19	56	78	6.588786e-07	1.941958e-06	2.704870e-06	-5.567854e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7183-01A-11D-2012-08	79	79	0	62	0	coding only	1	28836876	...	17	53	79	5.895229e-07	1.837924e-06	2.739548e-06	-5.562321e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-7235-01A-11D-2012-08	161	159	2	116	1.242236e-02	coding only	1	28836876	...	43	111	161	1.491146e-06	3.849238e-06	5.583129e-06	-5.253122e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7236-01A-11D-2012-08	63	62	1	42	1.587302e-02	coding only	1	28836876	...	20	35	63	6.935564e-07	1.213724e-06	2.184703e-06	-5.660608e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7238-01A-11D-2012-08	78	77	1	56	1.282051e-02	coding only	1	28836876	...	21	54	78	7.282342e-07	1.872602e-06	2.704870e-06	-5.567854e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7242-01A-11D-2012-08	344	341	3	273	8.720930e-03	coding only	1	28836876	...	68	262	344	2.358092e-06	9.085589e-06	1.192917e-05	-4.923390e+00	...	11	28780680	...	3.822008e-07
TCGA-CV-7243-01A-11D-2012-08	86	86	0	65	0	coding only	1	28836876	...	21	58	86	7.282342e-07	2.011314e-06	2.982293e-06	-5.525450e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7245-01A-11D-2012-08	577	570	7	434	1.213172e-02	coding only	1	28836876	...	136	419	577	4.716184e-06	1.453001e-05	2.000910e-05	-4.698772e+00	...	15	28780680	...	5.211830e-07
TCGA-CV-7247-01A-11D-2012-08	87	86	1	68	1.149425e-02	coding only	1	28836876	...	18	60	87	6.242008e-07	2.080669e-06	3.016970e-06	-5.520429e+00	...	8	28780680	...	2.779642e-07
TCGA-CV-7248-01A-11D-2012-08	337	332	5	251	1.483680e-02	coding only	1	28836876	...	81	242	337	2.808903e-06	8.392032e-06	1.168643e-05	-4.932318e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-7250-01A-11D-2012-08	245	241	4	176	1.632653e-02	coding only	1	28836876	...	65	161	245	2.254058e-06	5.583129e-06	8.496066e-06	-5.070782e+00	...	15	28780680	...	5.211830e-07
TCGA-CV-7252-01A-11D-2012-08	272	260	12	189	4.411765e-02	exome+100bp flanks	2	35881627	...	71	175	272	1.978729e-06	4.877148e-06	7.580481e-06	-5.120303e+00	...	14	32159724	...	4.353271e-07
TCGA-CV-7253-01A-11D-2012-08	218	213	5	170	2.293578e-02	coding only	1	28836876	...	43	157	218	1.491146e-06	5.444418e-06	7.559765e-06	-5.121492e+00	...	13	28780680	...	4.516919e-07
TCGA-CV-7254-01A-11D-2012-08	295	289	6	222	2.033898e-02	coding only	1	28836876	...	67	209	295	2.323414e-06	7.247664e-06	1.022996e-05	-4.990126e+00	...	13	28780680	...	4.516919e-07
TCGA-CV-7255-01A-11D-2012-08	131	130	1	102	7.633588e-03	coding only	1	28836876	...	28	87	131	9.709790e-07	3.016970e-06	4.542794e-06	-5.342677e+00	...	15	28780680	...	5.211830e-07
TCGA-CV-7261-01A-11D-2012-08	135	134	1	106	7.407407e-03	coding only	1	28836876	...	28	103	135	9.709790e-07	3.571815e-06	4.681506e-06	-5.329614e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-7263-01A-11D-2012-08	127	124	3	102	2.362205e-02	coding only	1	28836876	...	22	97	127	7.629120e-07	3.363749e-06	4.404083e-06	-5.356144e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7406-01A-11D-2078-08	233	231	2	167	8.583691e-03	coding only	1	28836876	...	64	155	233	2.219380e-06	5.375062e-06	8.079932e-06	-5.092592e+00	...	11	28780680	...	3.822008e-07
TCGA-CV-7407-01A-11D-2078-08	152	148	4	108	2.631579e-02	coding only	1	28836876	...	40	103	152	1.387113e-06	3.571815e-06	5.271029e-06	-5.278105e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7409-01A-31D-2229-08	349	347	2	274	5.730659e-03	coding only	1	28836876	...	73	253	349	2.531481e-06	8.773489e-06	1.210256e-05	-4.917123e+00	...	21	28780680	...	7.296561e-07
TCGA-CV-7410-01A-21D-2078-08	53	53	0	40	0	coding only	1	28836876	...	13	37	53	4.508117e-07	1.283079e-06	1.837924e-06	-5.735672e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-7411-01A-11D-2078-08	139	139	0	103	0	coding only	1	28836876	...	36	97	139	1.248402e-06	3.363749e-06	4.820217e-06	-5.316933e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7413-01A-11D-2078-08	87	85	2	63	2.298851e-02	coding only	1	28836876	...	22	61	87	7.629120e-07	2.115347e-06	3.016970e-06	-5.520429e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7414-01A-11D-2078-08	312	307	5	224	1.602564e-02	coding only	1	28836876	...	83	221	311	2.878259e-06	7.663798e-06	1.078480e-05	-4.967188e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7415-01A-11D-2078-08	96	92	4	64	4.166667e-02	coding only	1	28836876	...	28	62	96	9.709790e-07	2.150025e-06	3.329071e-06	-5.477677e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-7416-01A-11D-2078-08	90	90	0	67	0	coding only	1	28836876	...	23	61	90	7.975899e-07	2.115347e-06	3.121004e-06	-5.505706e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7418-01A-11D-2078-08	196	192	4	146	2.040816e-02	coding only	1	28836876	...	46	134	196	1.595180e-06	4.646828e-06	6.796853e-06	-5.167692e+00	...	12	28780680	...	4.169464e-07
TCGA-CV-7421-01A-11D-2078-08	82	81	1	53	1.219512e-02	coding only	1	28836876	...	28	48	82	9.709790e-07	1.664535e-06	2.843581e-06	-5.546134e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7422-01A-21D-2078-08	161	158	3	115	1.863354e-02	coding only	1	28836876	...	43	112	161	1.491146e-06	3.883916e-06	5.583129e-06	-5.253122e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-7423-01A-11D-2078-08	98	96	2	63	2.040816e-02	coding only	1	28836876	...	33	56	98	1.144368e-06	1.941958e-06	3.398426e-06	-5.468722e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7424-01A-11D-2078-08	227	226	1	169	4.405286e-03	coding only	1	28836876	...	57	163	227	1.976636e-06	5.652485e-06	7.871865e-06	-5.103922e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7425-01A-11D-2078-08	141	136	5	97	3.546099e-02	exome+100bp flanks	2	35881627	...	39	93	141	1.086907e-06	2.591856e-06	3.929588e-06	-5.405653e+00	...	4	32159724	...	1.243792e-07
TCGA-CV-7427-01A-11D-2078-08	515	507	8	385	1.553398e-02	coding only	1	28836876	...	122	378	515	4.230694e-06	1.310822e-05	1.785908e-05	-4.748141e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7429-01A-11D-2129-08	62	62	0	46	0	coding only	1	28836876	...	16	41	61	5.548451e-07	1.421791e-06	2.115347e-06	-5.674618e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-7430-01A-11D-2129-08	124	119	5	91	4.032258e-02	exome+100bp flanks	2	35881627	...	28	86	124	7.803437e-07	2.396770e-06	3.455808e-06	-5.461450e+00	...	5	32159724	...	1.554740e-07
TCGA-CV-7432-01A-11D-2129-08	188	184	4	138	2.127660e-02	coding only	1	28836876	...	46	126	188	1.595180e-06	4.369405e-06	6.519430e-06	-5.185790e+00	...	12	28780680	...	4.169464e-07
TCGA-CV-7433-01A-11D-2129-08	144	142	2	107	1.388889e-02	coding only	1	28836876	...	35	102	144	1.213724e-06	3.537138e-06	4.993606e-06	-5.301586e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7434-01A-11D-2129-08	110	108	2	83	1.818182e-02	coding only	1	28836876	...	25	78	110	8.669455e-07	2.704870e-06	3.814560e-06	-5.418556e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-7435-01A-11D-2129-08	93	93	0	74	0	coding only	1	28836876	...	19	67	93	6.588786e-07	2.323414e-06	3.225037e-06	-5.491465e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-7437-01A-21D-2129-08	161	161	0	119	0	coding only	1	28836876	...	42	109	161	1.456468e-06	3.779882e-06	5.583129e-06	-5.253122e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-7438-01A-21D-2129-08	116	113	3	84	2.586207e-02	coding only	1	28836876	...	29	78	116	1.005657e-06	2.704870e-06	4.022627e-06	-5.395490e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-7440-01A-11D-2129-08	248	243	5	200	2.016129e-02	coding only	1	28836876	...	43	180	248	1.491146e-06	6.242008e-06	8.600099e-06	-5.065497e+00	...	20	28780680	...	6.949106e-07
TCGA-CV-7446-01A-11D-2229-08	172	167	5	128	2.906977e-02	coding only	1	28836876	...	39	115	172	1.352435e-06	3.987949e-06	5.964585e-06	-5.224420e+00	...	13	28780680	...	4.516919e-07
TCGA-CV-7568-01A-11D-2229-08	2837	2799	38	1867	1.339443e-02	coding only	1	28836876	...	932	1858	2833	3.231973e-05	6.443139e-05	9.824226e-05	-4.007702e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-A45O-01A-21D-A24D-08	176	174	2	142	1.136364e-02	coding only	1	28836876	...	32	142	176	1.109690e-06	4.924250e-06	6.103296e-06	-5.214436e+00	...	0	28780680	...	0
TCGA-CV-A45P-01A-11D-A24D-08	185	183	2	134	1.081081e-02	coding only	1	28836876	...	49	133	185	1.699213e-06	4.612150e-06	6.415397e-06	-5.192776e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-A45Q-01A-11D-A24D-08	329	326	3	239	9.118541e-03	coding only	1	28836876	...	87	232	329	3.016970e-06	8.045254e-06	1.140900e-05	-4.942752e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-A45R-01A-11D-A24D-08	106	103	3	77	2.830189e-02	coding only	1	28836876	...	26	75	106	9.016233e-07	2.600837e-06	3.675849e-06	-5.434642e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-A45T-01A-11D-A24D-08	18	17	1	12	5.555556e-02	coding only	1	28836876	...	5	11	18	1.733891e-07	3.814560e-07	6.242008e-07	-6.204676e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-A45U-01A-12D-A24D-08	242	239	3	169	1.239669e-02	coding only	1	28836876	...	70	162	242	2.427447e-06	5.617807e-06	8.392032e-06	-5.076133e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-A45V-01A-21D-A25D-08	127	126	1	93	7.874016e-03	coding only	1	28836876	...	33	84	127	1.144368e-06	2.912937e-06	4.404083e-06	-5.356144e+00	...	9	28780680	...	3.127098e-07
TCGA-CV-A45W-01A-11D-A25D-08	701	693	8	549	1.141227e-02	coding only	1	28836876	...	144	521	700	4.993606e-06	1.806714e-05	2.427447e-05	-4.614850e+00	...	27	28780680	...	9.381293e-07
TCGA-CV-A45X-01A-21D-A25D-08	132	130	2	88	1.515152e-02	coding only	1	28836876	...	42	85	132	1.456468e-06	2.947615e-06	4.577472e-06	-5.339374e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-A45Y-01A-11D-A25D-08	91	91	0	67	0	coding only	1	28836876	...	24	65	91	8.322677e-07	2.254058e-06	3.155682e-06	-5.500907e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-A45Z-01A-21D-A25D-08	828	811	17	622	2.053140e-02	coding only	1	28836876	...	189	603	827	6.554108e-06	2.091073e-05	2.867856e-05	-4.542443e+00	...	19	28780680	...	6.601651e-07
TCGA-CV-A460-01A-21D-A25D-08	79	78	1	63	1.265823e-02	coding only	1	28836876	...	15	59	79	5.201673e-07	2.045991e-06	2.739548e-06	-5.562321e+00	...	4	28780680	...	1.389821e-07
TCGA-CV-A461-01A-41D-A25Y-08	688	682	6	517	8.720930e-03	coding only	1	28836876	...	165	482	688	5.721840e-06	1.671471e-05	2.385834e-05	-4.622360e+00	...	35	28780680	...	1.216094e-06
TCGA-CV-A463-01A-11D-A25Y-08	252	245	7	179	2.777778e-02	coding only	1	28836876	...	66	177	252	2.288736e-06	6.137974e-06	8.738811e-06	-5.058548e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-A464-01A-11D-A25Y-08	35	34	1	19	2.857143e-02	coding only	1	28836876	...	15	18	35	5.201673e-07	6.242008e-07	1.213724e-06	-5.915880e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-A465-01A-11D-A25Y-08	47	47	0	37	0	coding only	1	28836876	...	10	32	47	3.467782e-07	1.109690e-06	1.629858e-06	-5.787850e+00	...	5	28780680	...	1.737277e-07
TCGA-CV-A468-01A-11D-A25Y-08	623	615	8	413	1.284109e-02	coding only	1	28836876	...	202	407	623	7.004920e-06	1.411387e-05	2.160428e-05	-4.665460e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-A6JD-01A-11D-A31L-08	109	106	3	83	2.752294e-02	coding only	1	28836876	...	23	77	109	7.975899e-07	2.670192e-06	3.779882e-06	-5.422522e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-A6JE-01A-11D-A31L-08	159	156	3	120	1.886792e-02	coding only	1	28836876	...	36	113	159	1.248402e-06	3.918594e-06	5.513773e-06	-5.258551e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-A6JM-01A-11D-A31L-08	338	330	8	221	2.366864e-02	coding only	1	28836876	...	109	211	338	3.779882e-06	7.317020e-06	1.172110e-05	-4.931032e+00	...	10	28780680	...	3.474553e-07
TCGA-CV-A6JN-01A-11D-A31L-08	92	92	0	70	0	coding only	1	28836876	...	22	68	92	7.629120e-07	2.358092e-06	3.190359e-06	-5.496160e+00	...	2	28780680	...	6.949106e-08
TCGA-CV-A6JO-01B-11D-A34J-08	92	92	0	70	0	coding only	1	28836876	...	22	62	90	7.629120e-07	2.150025e-06	3.121004e-06	-5.505706e+00	...	6	28780680	...	2.084732e-07
TCGA-CV-A6JT-01A-11D-A31L-08	67	66	1	50	1.492537e-02	coding only	1	28836876	...	16	49	67	5.548451e-07	1.699213e-06	2.323414e-06	-5.633873e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-A6JU-01A-11D-A31L-08	163	162	1	118	6.134969e-03	coding only	1	28836876	...	44	103	163	1.525824e-06	3.571815e-06	5.652485e-06	-5.247761e+00	...	15	28780680	...	5.211830e-07
TCGA-CV-A6JY-01A-11D-A31L-08	109	108	1	87	9.174312e-03	coding only	1	28836876	...	21	84	109	7.282342e-07	2.912937e-06	3.779882e-06	-5.422522e+00	...	3	28780680	...	1.042366e-07
TCGA-CV-A6JZ-01A-11D-A31L-08	136	136	0	100	0	coding only	1	28836876	...	36	93	136	1.248402e-06	3.225037e-06	4.716184e-06	-5.326409e+00	...	7	28780680	...	2.432187e-07
TCGA-CV-A6K0-01B-21D-A31L-08	32	32	0	22	0	coding only	1	28836876	...	10	21	32	3.467782e-07	7.282342e-07	1.109690e-06	-5.954798e+00	...	1	28780680	...	3.474553e-08
TCGA-CV-A6K1-01A-11D-A31L-08	604	588	16	449	2.649007e-02	coding only	1	28836876	...	139	371	604	4.820217e-06	1.286547e-05	2.094540e-05	-4.678911e+00	...	78	28780680	...	2.710151e-06
TCGA-CV-A6K2-01A-11D-A31L-08	825	811	14	583	1.696970e-02	coding only	1	28836876	...	228	574	823	7.906543e-06	1.990507e-05	2.853985e-05	-4.544548e+00	...	6	28780680	...	2.084732e-07
TCGA-CX-7082-01A-11D-2012-08	111	111	0	83	0	coding only	1	28836876	...	28	78	111	9.709790e-07	2.704870e-06	3.849238e-06	-5.414625e+00	...	5	28780680	...	1.737277e-07
TCGA-CX-7085-01A-21D-2012-08	173	171	2	138	1.156069e-02	coding only	1	28836876	...	33	137	173	1.144368e-06	4.750861e-06	5.999263e-06	-5.221902e+00	...	1	28780680	...	3.474553e-08
TCGA-CX-7086-01A-11D-2078-08	271	265	6	204	2.214022e-02	coding only	1	28836876	...	61	193	271	2.115347e-06	6.692819e-06	9.397689e-06	-5.026979e+00	...	10	28780680	...	3.474553e-07
TCGA-CX-7219-01A-11D-2012-08	136	134	2	105	1.470588e-02	coding only	1	28836876	...	29	99	136	1.005657e-06	3.433104e-06	4.716184e-06	-5.326409e+00	...	6	28780680	...	2.084732e-07
TCGA-CX-A4AQ-01A-11D-A25D-08	116	116	0	90	0	coding only	1	28836876	...	26	81	116	9.016233e-07	2.808903e-06	4.022627e-06	-5.395490e+00	...	9	28780680	...	3.127098e-07
TCGA-D6-6515-01A-21D-1870-08	70	70	0	50	0	coding only	1	28836876	...	20	48	70	6.935564e-07	1.664535e-06	2.427447e-06	-5.614850e+00	...	2	28780680	...	6.949106e-08
TCGA-D6-6516-01A-11D-1870-08	2295	2244	51	1480	2.222222e-02	coding only	1	28836876	...	763	1470	2294	2.645918e-05	5.097640e-05	7.955092e-05	-4.099355e+00	...	8	28780680	...	2.779642e-07
TCGA-D6-6517-01A-11D-1870-08	81	79	2	62	2.469136e-02	coding only	1	28836876	...	17	57	81	5.895229e-07	1.976636e-06	2.808903e-06	-5.551463e+00	...	5	28780680	...	1.737277e-07
TCGA-D6-6823-01A-11D-1912-08	116	113	3	93	2.586207e-02	coding only	1	28836876	...	20	88	116	6.935564e-07	3.051648e-06	4.022627e-06	-5.395490e+00	...	5	28780680	...	1.737277e-07
TCGA-D6-6824-01A-11D-1912-08	73	73	0	59	0	coding only	1	28836876	...	14	55	72	4.854895e-07	1.907280e-06	2.496803e-06	-5.602616e+00	...	3	28780680	...	1.042366e-07
TCGA-D6-6825-01A-21D-1912-08	84	83	1	58	1.190476e-02	coding only	1	28836876	...	25	54	84	8.669455e-07	1.872602e-06	2.912937e-06	-5.535669e+00	...	4	28780680	...	1.389821e-07
TCGA-D6-6826-01A-11D-1912-08	117	114	3	89	2.564103e-02	coding only	1	28836876	...	25	84	117	8.669455e-07	2.912937e-06	4.057305e-06	-5.391762e+00	...	5	28780680	...	1.737277e-07
TCGA-D6-6827-01A-11D-1912-08	19	19	0	13	0	coding only	1	28836876	...	6	10	19	2.080669e-07	3.467782e-07	6.588786e-07	-6.181195e+00	...	3	28780680	...	1.042366e-07
TCGA-D6-8568-01A-11D-2394-08	119	117	2	98	1.680672e-02	coding only	1	28836876	...	19	88	119	6.588786e-07	3.051648e-06	4.126661e-06	-5.384401e+00	...	10	28780680	...	3.474553e-07
TCGA-D6-8569-01A-11D-2394-08	153	151	2	110	1.307190e-02	coding only	1	28836876	...	41	105	153	1.421791e-06	3.641171e-06	5.305706e-06	-5.275257e+00	...	5	28780680	...	1.737277e-07
TCGA-D6-A4Z9-01A-11D-A25D-08	108	107	1	79	9.259259e-03	coding only	1	28836876	...	28	75	108	9.709790e-07	2.600837e-06	3.745205e-06	-5.426524e+00	...	4	28780680	...	1.389821e-07
TCGA-D6-A4ZB-01A-11D-A25D-08	218	216	2	170	9.174312e-03	coding only	1	28836876	...	46	168	218	1.595180e-06	5.825874e-06	7.559765e-06	-5.121492e+00	...	2	28780680	...	6.949106e-08
TCGA-D6-A6EK-01A-11D-A31L-08	195	192	3	150	1.538462e-02	coding only	1	28836876	...	42	137	195	1.456468e-06	4.750861e-06	6.762175e-06	-5.169914e+00	...	13	28780680	...	4.516919e-07
TCGA-D6-A6EM-01A-21D-A31L-08	116	116	0	93	0	coding only	1	28836876	...	23	87	116	7.975899e-07	3.016970e-06	4.022627e-06	-5.395490e+00	...	6	28780680	...	2.084732e-07
TCGA-D6-A6EN-01A-11D-A31L-08	125	125	0	93	0	coding only	1	28836876	...	32	83	125	1.109690e-06	2.878259e-06	4.334728e-06	-5.363038e+00	...	10	28780680	...	3.474553e-07
TCGA-D6-A6EO-01A-11D-A31L-08	99	99	0	81	0	coding only	1	28836876	...	18	75	98	6.242008e-07	2.600837e-06	3.398426e-06	-5.468722e+00	...	5	28780680	...	1.737277e-07
TCGA-D6-A6EP-01A-11D-A31L-08	141	139	2	108	1.418440e-02	coding only	1	28836876	...	31	104	141	1.075012e-06	3.606493e-06	4.889573e-06	-5.310729e+00	...	4	28780680	...	1.389821e-07
TCGA-D6-A6EQ-01A-11D-A31L-08	108	103	5	79	4.629630e-02	exome+100bp flanks	2	35881627	...	24	75	108	6.688660e-07	2.090206e-06	3.009897e-06	-5.521448e+00	...	4	32159724	...	1.243792e-07
TCGA-D6-A6ES-01A-12D-A31L-08	233	227	6	171	2.575107e-02	coding only	1	28836876	...	56	163	232	1.941958e-06	5.652485e-06	8.045254e-06	-5.094460e+00	...	6	28780680	...	2.084732e-07
TCGA-D6-A74Q-01A-11D-A34J-08	510	502	8	365	1.568627e-02	coding only	1	28836876	...	137	353	509	4.750861e-06	1.224127e-05	1.765101e-05	-4.753230e+00	...	11	28780680	...	3.822008e-07
TCGA-DQ-5624-01A-01D-1870-08	123	120	3	92	2.439024e-02	coding only	1	28836876	...	28	91	123	9.709790e-07	3.155682e-06	4.265372e-06	-5.370043e+00	...	1	28780680	...	3.474553e-08
TCGA-DQ-5625-01A-01D-1870-08	224	218	6	174	2.678571e-02	coding only	1	28836876	...	44	165	223	1.525824e-06	5.721840e-06	7.733154e-06	-5.111643e+00	...	8	28780680	...	2.779642e-07
TCGA-DQ-5629-01A-01D-1870-08	382	375	7	278	1.832461e-02	coding only	1	28836876	...	97	264	382	3.363749e-06	9.154945e-06	1.324693e-05	-4.877885e+00	...	14	28780680	...	4.864374e-07
TCGA-DQ-5630-01A-01D-1870-08	89	87	2	68	2.247191e-02	coding only	1	28836876	...	19	64	89	6.588786e-07	2.219380e-06	3.086326e-06	-5.510558e+00	...	4	28780680	...	1.389821e-07
TCGA-DQ-5631-01A-01D-1870-08	114	109	5	78	4.385965e-02	exome+100bp flanks	2	35881627	...	31	74	114	8.639519e-07	2.062337e-06	3.177113e-06	-5.497967e+00	...	4	32159724	...	1.243792e-07
TCGA-DQ-7588-01A-11D-2078-08	124	124	0	94	0	coding only	1	28836876	...	30	87	124	1.040335e-06	3.016970e-06	4.300050e-06	-5.366527e+00	...	7	28780680	...	2.432187e-07
TCGA-DQ-7589-01A-11D-2229-08	402	396	6	299	1.492537e-02	coding only	1	28836876	...	97	290	402	3.363749e-06	1.005657e-05	1.394048e-05	-4.855722e+00	...	9	28780680	...	3.127098e-07
TCGA-DQ-7590-01A-11D-2229-08	55	54	1	37	1.818182e-02	coding only	1	28836876	...	17	37	55	5.895229e-07	1.283079e-06	1.907280e-06	-5.719586e+00	...	0	28780680	...	0
TCGA-DQ-7591-01A-11D-2078-08	44	43	1	33	2.272727e-02	coding only	1	28836876	...	10	31	44	3.467782e-07	1.075012e-06	1.525824e-06	-5.816496e+00	...	2	28780680	...	6.949106e-08
TCGA-DQ-7592-01A-11D-2078-08	89	88	1	63	1.123596e-02	coding only	1	28836876	...	25	57	89	8.669455e-07	1.976636e-06	3.086326e-06	-5.510558e+00	...	6	28780680	...	2.084732e-07
TCGA-DQ-7593-01A-11D-2229-08	36	36	0	29	0	coding only	1	28836876	...	7	22	36	2.427447e-07	7.629120e-07	1.248402e-06	-5.903646e+00	...	7	28780680	...	2.432187e-07
TCGA-DQ-7594-01A-11D-2229-08	388	381	7	257	1.804124e-02	coding only	1	28836876	...	124	255	388	4.300050e-06	8.842844e-06	1.345499e-05	-4.871116e+00	...	2	28780680	...	6.949106e-08
TCGA-DQ-7595-01A-11D-2229-08	391	387	4	301	1.023018e-02	coding only	1	28836876	...	86	278	391	2.982293e-06	9.640434e-06	1.355903e-05	-4.867771e+00	...	22	28780680	...	7.644017e-07
TCGA-DQ-7596-01A-11D-2229-08	39	39	0	33	0	coding only	1	28836876	...	6	31	39	2.080669e-07	1.075012e-06	1.352435e-06	-5.868884e+00	...	2	28780680	...	6.949106e-08
TCGA-F7-7848-01A-11D-2129-08	368	366	2	273	5.434783e-03	coding only	1	28836876	...	93	258	368	3.225037e-06	8.946878e-06	1.276144e-05	-4.894100e+00	...	15	28780680	...	5.211830e-07
TCGA-F7-8489-01A-31D-2394-08	163	161	2	120	1.226994e-02	coding only	1	28836876	...	41	115	163	1.421791e-06	3.987949e-06	5.652485e-06	-5.247761e+00	...	5	28780680	...	1.737277e-07
TCGA-F7-A50G-01A-11D-A25Y-08	116	116	0	85	0	coding only	1	28836876	...	31	83	116	1.075012e-06	2.878259e-06	4.022627e-06	-5.395490e+00	...	2	28780680	...	6.949106e-08
TCGA-F7-A50I-01A-11D-A28R-08	175	175	0	135	0	coding only	1	28836876	...	40	127	175	1.387113e-06	4.404083e-06	6.068619e-06	-5.216910e+00	...	8	28780680	...	2.779642e-07
TCGA-F7-A50J-01A-21D-A28R-08	213	207	6	149	2.816901e-02	coding only	1	28836876	...	58	139	213	2.011314e-06	4.820217e-06	7.386376e-06	-5.131569e+00	...	10	28780680	...	3.474553e-07
TCGA-F7-A61S-01A-11D-A28R-08	140	138	2	102	1.428571e-02	coding only	1	28836876	...	36	93	139	1.248402e-06	3.225037e-06	4.820217e-06	-5.316933e+00	...	8	28780680	...	2.779642e-07
TCGA-F7-A61V-01A-11D-A28R-08	119	118	1	94	8.403361e-03	coding only	1	28836876	...	24	88	119	8.322677e-07	3.051648e-06	4.126661e-06	-5.384401e+00	...	6	28780680	...	2.084732e-07
TCGA-F7-A61W-01A-11D-A28R-08	80	80	0	60	0	coding only	1	28836876	...	20	57	80	6.935564e-07	1.976636e-06	2.774226e-06	-5.556858e+00	...	3	28780680	...	1.042366e-07
TCGA-F7-A620-01A-11D-A28R-08	85	83	2	52	2.352941e-02	coding only	1	28836876	...	31	46	85	1.075012e-06	1.595180e-06	2.947615e-06	-5.530529e+00	...	6	28780680	...	2.084732e-07
TCGA-F7-A622-01A-11D-A28R-08	81	80	1	61	1.234568e-02	coding only	1	28836876	...	19	50	81	6.588786e-07	1.733891e-06	2.808903e-06	-5.551463e+00	...	11	28780680	...	3.822008e-07
TCGA-F7-A623-01A-11D-A28R-08	233	230	3	163	1.287554e-02	coding only	1	28836876	...	67	153	233	2.323414e-06	5.305706e-06	8.079932e-06	-5.092592e+00	...	10	28780680	...	3.474553e-07
TCGA-F7-A624-01A-22D-A30E-08	4197	4141	56	3079	1.334286e-02	coding only	1	28836876	...	1061	2763	4195	3.679317e-05	9.581482e-05	1.454735e-04	-3.837216e+00	...	315	28780680	...	1.094484e-05
TCGA-H7-7774-01A-21D-2078-08	173	172	1	134	5.780347e-03	coding only	1	28836876	...	38	125	173	1.317757e-06	4.334728e-06	5.999263e-06	-5.221902e+00	...	9	28780680	...	3.127098e-07
TCGA-H7-8501-01A-11D-2394-08	176	175	1	135	5.681818e-03	coding only	1	28836876	...	40	134	176	1.387113e-06	4.646828e-06	6.103296e-06	-5.214436e+00	...	1	28780680	...	3.474553e-08
TCGA-H7-A6C4-01A-11D-A30E-08	59	57	2	44	3.389831e-02	coding only	1	28836876	...	13	42	59	4.508117e-07	1.456468e-06	2.045991e-06	-5.689096e+00	...	2	28780680	...	6.949106e-08
TCGA-H7-A6C5-01A-11D-A30E-08	143	142	1	101	6.993007e-03	coding only	1	28836876	...	41	92	143	1.421791e-06	3.190359e-06	4.958928e-06	-5.304612e+00	...	9	28780680	...	3.127098e-07
TCGA-H7-A76A-01A-51D-A34J-08	96	95	1	69	1.041667e-02	coding only	1	28836876	...	26	65	96	9.016233e-07	2.254058e-06	3.329071e-06	-5.477677e+00	...	4	28780680	...	1.389821e-07
TCGA-HD-7229-01A-11D-2012-08	189	186	3	145	1.587302e-02	coding only	1	28836876	...	41	137	189	1.421791e-06	4.750861e-06	6.554108e-06	-5.183486e+00	...	8	28780680	...	2.779642e-07
TCGA-HD-7753-01A-11D-2078-08	114	112	2	92	1.754386e-02	coding only	1	28836876	...	20	80	114	6.935564e-07	2.774226e-06	3.953271e-06	-5.403043e+00	...	12	28780680	...	4.169464e-07
TCGA-HD-7754-01A-11D-2078-08	80	77	3	54	3.750000e-02	coding only	1	28836876	...	23	50	80	7.975899e-07	1.733891e-06	2.774226e-06	-5.556858e+00	...	4	28780680	...	1.389821e-07
TCGA-HD-7831-01A-11D-2129-08	48	48	0	33	0	coding only	1	28836876	...	15	27	48	5.201673e-07	9.363011e-07	1.664535e-06	-5.778707e+00	...	6	28780680	...	2.084732e-07
TCGA-HD-7832-01A-11D-2129-08	118	114	4	83	3.389831e-02	coding only	1	28836876	...	31	76	118	1.075012e-06	2.635514e-06	4.091983e-06	-5.388066e+00	...	7	28780680	...	2.432187e-07
TCGA-HD-7917-01A-11D-2229-08	126	124	2	91	1.587302e-02	coding only	1	28836876	...	33	87	126	1.144368e-06	3.016970e-06	4.369405e-06	-5.359578e+00	...	4	28780680	...	1.389821e-07
TCGA-HD-8224-01A-11D-2394-08	88	86	2	73	2.272727e-02	coding only	1	28836876	...	13	67	88	4.508117e-07	2.323414e-06	3.051648e-06	-5.515466e+00	...	6	28780680	...	2.084732e-07
TCGA-HD-8314-01A-11D-2394-08	83	83	0	62	0	coding only	1	28836876	...	21	62	83	7.282342e-07	2.150025e-06	2.878259e-06	-5.540870e+00	...	0	28780680	...	0
TCGA-HD-8634-01A-11D-2394-08	87	85	2	65	2.298851e-02	coding only	1	28836876	...	20	60	87	6.935564e-07	2.080669e-06	3.016970e-06	-5.520429e+00	...	5	28780680	...	1.737277e-07
TCGA-HD-8635-01A-11D-2394-08	250	246	4	176	1.600000e-02	coding only	1	28836876	...	70	170	250	2.427447e-06	5.895229e-06	8.669455e-06	-5.062008e+00	...	6	28780680	...	2.084732e-07
TCGA-HD-A4C1-01A-11D-A24D-08	242	236	6	167	2.479339e-02	coding only	1	28836876	...	69	161	242	2.392770e-06	5.583129e-06	8.392032e-06	-5.076133e+00	...	6	28780680	...	2.084732e-07
TCGA-HD-A633-01A-11D-A28R-08	160	160	0	121	0	coding only	1	28836876	...	39	109	160	1.352435e-06	3.779882e-06	5.548451e-06	-5.255828e+00	...	12	28780680	...	4.169464e-07
TCGA-HD-A634-01A-11D-A28R-08	55	55	0	37	0	coding only	1	28836876	...	18	31	55	6.242008e-07	1.075012e-06	1.907280e-06	-5.719586e+00	...	6	28780680	...	2.084732e-07
TCGA-HD-A6HZ-01A-12D-A31L-08	113	110	3	76	2.654867e-02	coding only	1	28836876	...	34	71	113	1.179046e-06	2.462125e-06	3.918594e-06	-5.406870e+00	...	5	28780680	...	1.737277e-07
TCGA-HD-A6I0-01A-11D-A31L-08	95	92	3	72	3.157895e-02	coding only	1	28836876	...	20	67	95	6.935564e-07	2.323414e-06	3.294393e-06	-5.482225e+00	...	5	28780680	...	1.737277e-07
TCGA-HL-7533-01A-11D-2229-08	931	913	18	672	1.933405e-02	coding only	1	28836876	...	241	668	931	8.357355e-06	2.316478e-05	3.228505e-05	-4.490999e+00	...	4	28780680	...	1.389821e-07
TCGA-IQ-7630-01A-11D-2078-08	153	148	5	111	3.267974e-02	exome+100bp flanks	2	35881627	...	37	108	153	1.031168e-06	3.009897e-06	4.264021e-06	-5.370181e+00	...	3	32159724	...	9.328438e-08
TCGA-IQ-7631-01A-11D-2078-08	39	37	2	22	5.128205e-02	coding only	1	28836876	...	15	19	39	5.201673e-07	6.588786e-07	1.352435e-06	-5.868884e+00	...	3	28780680	...	1.042366e-07
TCGA-IQ-7632-01A-11D-2078-08	64	64	0	46	0	coding only	1	28836876	...	18	43	64	6.242008e-07	1.491146e-06	2.219380e-06	-5.653768e+00	...	3	28780680	...	1.042366e-07
TCGA-IQ-A61E-01A-22D-A30E-08	237	235	2	170	8.438819e-03	coding only	1	28836876	...	65	165	237	2.254058e-06	5.721840e-06	8.218643e-06	-5.085200e+00	...	4	28780680	...	1.389821e-07
TCGA-IQ-A61G-01A-11D-A30E-08	173	172	1	127	5.780347e-03	coding only	1	28836876	...	45	120	173	1.560502e-06	4.161338e-06	5.999263e-06	-5.221902e+00	...	7	28780680	...	2.432187e-07
TCGA-IQ-A61H-01A-11D-A30E-08	182	179	3	134	1.648352e-02	coding only	1	28836876	...	45	126	182	1.560502e-06	4.369405e-06	6.311363e-06	-5.199877e+00	...	8	28780680	...	2.779642e-07
TCGA-IQ-A61I-01A-11D-A30E-08	173	170	3	122	1.734104e-02	coding only	1	28836876	...	48	119	173	1.664535e-06	4.126661e-06	5.999263e-06	-5.221902e+00	...	3	28780680	...	1.042366e-07
TCGA-IQ-A61J-01A-11D-A30E-08	65	65	0	48	0	coding only	1	28836876	...	17	43	64	5.895229e-07	1.491146e-06	2.219380e-06	-5.653768e+00	...	4	28780680	...	1.389821e-07
TCGA-IQ-A61K-01A-11D-A30E-08	91	89	2	67	2.197802e-02	coding only	1	28836876	...	22	62	91	7.629120e-07	2.150025e-06	3.155682e-06	-5.500907e+00	...	5	28780680	...	1.737277e-07
TCGA-IQ-A61L-01A-11D-A30E-08	118	117	1	89	8.474576e-03	coding only	1	28836876	...	28	84	118	9.709790e-07	2.912937e-06	4.091983e-06	-5.388066e+00	...	5	28780680	...	1.737277e-07
TCGA-IQ-A61O-01A-11D-A30E-08	62	61	1	42	1.612903e-02	coding only	1	28836876	...	19	38	62	6.588786e-07	1.317757e-06	2.150025e-06	-5.667557e+00	...	4	28780680	...	1.389821e-07
TCGA-IQ-A6SG-01A-12D-A34J-08	124	123	1	92	8.064516e-03	coding only	1	28836876	...	30	87	123	1.040335e-06	3.016970e-06	4.265372e-06	-5.370043e+00	...	5	28780680	...	1.737277e-07
TCGA-IQ-A6SH-01A-12D-A34J-08	100	97	3	69	3.000000e-02	coding only	1	28836876	...	28	62	100	9.709790e-07	2.150025e-06	3.467782e-06	-5.459948e+00	...	7	28780680	...	2.432187e-07
TCGA-KU-A66S-01A-21D-A30E-08	637	627	10	499	1.569859e-02	coding only	1	28836876	...	128	479	637	4.438761e-06	1.661068e-05	2.208977e-05	-4.655809e+00	...	20	28780680	...	6.949106e-07
TCGA-KU-A66T-01A-11D-A30E-08	133	130	3	97	2.255639e-02	coding only	1	28836876	...	33	95	133	1.144368e-06	3.294393e-06	4.612150e-06	-5.336097e+00	...	2	28780680	...	6.949106e-08
TCGA-KU-A6H7-01A-11D-A31L-08	203	199	4	147	1.970443e-02	coding only	1	28836876	...	52	143	203	1.803247e-06	4.958928e-06	7.039597e-06	-5.152452e+00	...	4	28780680	...	1.389821e-07
TCGA-KU-A6H8-01A-21D-A34J-08	39	38	1	31	2.564103e-02	coding only	1	28836876	...	7	29	39	2.427447e-07	1.005657e-06	1.352435e-06	-5.868884e+00	...	2	28780680	...	6.949106e-08
TCGA-MT-A51W-01A-21D-A25Y-08	78	78	0	61	0	coding only	1	28836876	...	17	57	78	5.895229e-07	1.976636e-06	2.704870e-06	-5.567854e+00	...	4	28780680	...	1.389821e-07
TCGA-MT-A51X-01A-11D-A25Y-08	65	64	1	44	1.538462e-02	coding only	1	28836876	...	20	44	65	6.935564e-07	1.525824e-06	2.254058e-06	-5.647035e+00	...	0	28780680	...	0
TCGA-MT-A67A-01A-11D-A30E-08	144	139	5	106	3.472222e-02	exome+100bp flanks	2	35881627	...	33	98	144	9.196907e-07	2.731203e-06	4.013196e-06	-5.396510e+00	...	8	32159724	...	2.487584e-07
TCGA-MT-A67D-01A-31D-A30E-08	138	134	4	99	2.898551e-02	coding only	1	28836876	...	35	93	138	1.213724e-06	3.225037e-06	4.785539e-06	-5.320069e+00	...	5	28780680	...	1.737277e-07
TCGA-MT-A67F-01A-11D-A30E-08	372	365	7	289	1.881720e-02	coding only	1	28836876	...	76	289	372	2.635514e-06	1.002189e-05	1.290015e-05	-4.889405e+00	...	0	28780680	...	0
TCGA-MT-A67G-01A-11D-A30E-08	85	84	1	61	1.176471e-02	coding only	1	28836876	...	23	58	85	7.975899e-07	2.011314e-06	2.947615e-06	-5.530529e+00	...	3	28780680	...	1.042366e-07
TCGA-MT-A7BN-01A-12D-A34J-08	73	72	1	56	1.369863e-02	coding only	1	28836876	...	16	52	73	5.548451e-07	1.803247e-06	2.531481e-06	-5.596625e+00	...	4	28780680	...	1.389821e-07
TCGA-MZ-A5BI-01A-31D-A34J-08	49	49	0	40	0	coding only	1	28836876	...	9	36	49	3.121004e-07	1.248402e-06	1.699213e-06	-5.769752e+00	...	4	28780680	...	1.389821e-07
TCGA-MZ-A6I9-01A-11D-A31L-08	61	60	1	40	1.639344e-02	coding only	1	28836876	...	20	37	61	6.935564e-07	1.283079e-06	2.115347e-06	-5.674618e+00	...	3	28780680	...	1.042366e-07
TCGA-MZ-A7D7-01A-21D-A34J-08	214	211	3	144	1.401869e-02	coding only	1	28836876	...	67	136	214	2.323414e-06	4.716184e-06	7.421054e-06	-5.129534e+00	...	8	28780680	...	2.779642e-07
TCGA-P3-A5Q6-01A-11D-A28R-08	150	149	1	109	6.666667e-03	coding only	1	28836876	...	40	103	150	1.387113e-06	3.571815e-06	5.201673e-06	-5.283857e+00	...	6	28780680	...	2.084732e-07
TCGA-P3-A5QA-01A-11D-A28R-08	92	92	0	73	0	coding only	1	28836876	...	19	68	92	6.588786e-07	2.358092e-06	3.190359e-06	-5.496160e+00	...	5	28780680	...	1.737277e-07
TCGA-P3-A5QE-01A-11D-A28R-08	52	52	0	39	0	coding only	1	28836876	...	13	36	52	4.508117e-07	1.248402e-06	1.803247e-06	-5.743945e+00	...	3	28780680	...	1.042366e-07
TCGA-P3-A5QF-01A-11D-A28R-08	460	446	14	325	3.043478e-02	exome+100bp flanks	2	35881627	...	120	319	459	3.344330e-06	8.890344e-06	1.279206e-05	-4.893059e+00	...	6	32159724	...	1.865688e-07
TCGA-P3-A6SW-01A-11D-A34J-08	121	119	2	89	1.652893e-02	coding only	1	28836876	...	30	86	121	1.040335e-06	2.982293e-06	4.196016e-06	-5.377163e+00	...	3	28780680	...	1.042366e-07
TCGA-P3-A6SX-01A-11D-A34J-08	204	198	6	156	2.941176e-02	coding only	1	28836876	...	42	151	204	1.456468e-06	5.236351e-06	7.074275e-06	-5.150318e+00	...	5	28780680	...	1.737277e-07
TCGA-P3-A6T0-01A-12D-A34J-08	105	104	1	77	9.523810e-03	coding only	1	28836876	...	27	71	105	9.363011e-07	2.462125e-06	3.641171e-06	-5.438759e+00	...	6	28780680	...	2.084732e-07
TCGA-P3-A6T2-01A-11D-A34J-08	76	75	1	48	1.315789e-02	coding only	1	28836876	...	27	44	76	9.363011e-07	1.525824e-06	2.635514e-06	-5.579135e+00	...	4	28780680	...	1.389821e-07
TCGA-P3-A6T3-01A-11D-A34J-08	138	138	0	107	0	coding only	1	28836876	...	31	106	137	1.075012e-06	3.675849e-06	4.750861e-06	-5.323228e+00	...	0	28780680	...	0
TCGA-P3-A6T4-01A-11D-A34J-08	188	186	2	140	1.063830e-02	coding only	1	28836876	...	46	134	188	1.595180e-06	4.646828e-06	6.519430e-06	-5.185790e+00	...	6	28780680	...	2.084732e-07
TCGA-P3-A6T5-01A-11D-A34J-08	294	290	4	202	1.360544e-02	coding only	1	28836876	...	88	194	294	3.051648e-06	6.727497e-06	1.019528e-05	-4.991601e+00	...	8	28780680	...	2.779642e-07
TCGA-P3-A6T6-01A-11D-A34J-08	155	151	4	120	2.580645e-02	coding only	1	28836876	...	31	115	155	1.075012e-06	3.987949e-06	5.375062e-06	-5.269617e+00	...	5	28780680	...	1.737277e-07
TCGA-P3-A6T7-01A-11D-A34J-08	165	163	2	122	1.212121e-02	coding only	1	28836876	...	41	109	165	1.421791e-06	3.779882e-06	5.721840e-06	-5.242464e+00	...	13	28780680	...	4.516919e-07
TCGA-P3-A6T8-01A-11D-A34J-08	105	102	3	82	2.857143e-02	coding only	1	28836876	...	20	71	104	6.935564e-07	2.462125e-06	3.606493e-06	-5.442915e+00	...	10	28780680	...	3.474553e-07
TCGA-QK-A64Z-01A-11D-A30E-08	110	108	2	71	1.818182e-02	coding only	1	28836876	...	37	68	110	1.283079e-06	2.358092e-06	3.814560e-06	-5.418556e+00	...	3	28780680	...	1.042366e-07
TCGA-QK-A652-01A-11D-A30E-08	57	57	0	47	0	coding only	1	28836876	...	10	46	57	3.467782e-07	1.595180e-06	1.976636e-06	-5.704073e+00	...	1	28780680	...	3.474553e-08
TCGA-QK-A6IF-01A-11D-A31L-08	35	34	1	25	2.857143e-02	coding only	1	28836876	...	9	23	35	3.121004e-07	7.975899e-07	1.213724e-06	-5.915880e+00	...	2	28780680	...	6.949106e-08
TCGA-QK-A6IG-01A-11D-A31L-08	140	138	2	111	1.428571e-02	coding only	1	28836876	...	27	108	140	9.363011e-07	3.745205e-06	4.854895e-06	-5.313820e+00	...	3	28780680	...	1.042366e-07
TCGA-QK-A6IH-01A-11D-A31L-08	83	83	0	65	0	coding only	1	28836876	...	18	63	83	6.242008e-07	2.184703e-06	2.878259e-06	-5.540870e+00	...	2	28780680	...	6.949106e-08
TCGA-QK-A6II-01A-11D-A31L-08	200	197	3	145	1.500000e-02	coding only	1	28836876	...	52	137	200	1.803247e-06	4.750861e-06	6.935564e-06	-5.158918e+00	...	8	28780680	...	2.779642e-07
TCGA-QK-A6IJ-01A-11D-A31L-08	101	98	3	71	2.970297e-02	coding only	1	28836876	...	27	66	101	9.363011e-07	2.288736e-06	3.502460e-06	-5.455627e+00	...	5	28780680	...	1.737277e-07
TCGA-QK-A6V9-01A-11D-A34J-08	106	103	3	74	2.830189e-02	coding only	1	28836876	...	29	68	106	1.005657e-06	2.358092e-06	3.675849e-06	-5.434642e+00	...	6	28780680	...	2.084732e-07
TCGA-QK-A6VB-01A-12D-A34J-08	579	572	7	452	1.208981e-02	coding only	1	28836876	...	120	341	579	4.161338e-06	1.182514e-05	2.007846e-05	-4.697270e+00	...	111	28780680	...	3.856754e-06
TCGA-QK-A6VC-01A-23D-A34J-08	250	246	4	188	1.600000e-02	coding only	1	28836876	...	58	186	250	2.011314e-06	6.450075e-06	8.669455e-06	-5.062008e+00	...	2	28780680	...	6.949106e-08
TCGA-RS-A6TO-01A-32D-A34J-08	215	210	5	151	2.325581e-02	coding only	1	28836876	...	59	143	215	2.045991e-06	4.958928e-06	7.455731e-06	-5.127510e+00	...	8	28780680	...	2.779642e-07
TCGA-RS-A6TP-01A-12D-A34J-08	160	156	4	112	2.500000e-02	coding only	1	28836876	...	44	109	160	1.525824e-06	3.779882e-06	5.548451e-06	-5.255828e+00	...	3	28780680	...	1.042366e-07
TCGA-T2-A6WX-01A-12D-A34J-08	238	233	5	175	2.100840e-02	coding only	1	28836876	...	58	172	238	2.011314e-06	5.964585e-06	8.253321e-06	-5.083371e+00	...	3	28780680	...	1.042366e-07
TCGA-T2-A6WZ-01A-21D-A34J-08	127	127	0	92	0	coding only	1	28836876	...	35	88	127	1.213724e-06	3.051648e-06	4.404083e-06	-5.356144e+00	...	4	28780680	...	1.389821e-07
TCGA-T2-A6X0-01A-11D-A34J-08	78	76	2	53	2.564103e-02	coding only	1	28836876	...	23	50	78	7.975899e-07	1.733891e-06	2.704870e-06	-5.567854e+00	...	2	28780680	...	6.949106e-08
TCGA-T2-A6X2-01A-12D-A34J-08	428	424	4	320	9.345794e-03	coding only	1	28836876	...	104	312	427	3.606493e-06	1.081948e-05	1.480743e-05	-4.829520e+00	...	7	28780680	...	2.432187e-07
TCGA-TN-A7HI-01A-11D-A34J-08	72	72	0	59	0	coding only	1	28836876	...	13	54	72	4.508117e-07	1.872602e-06	2.496803e-06	-5.602616e+00	...	5	28780680	...	1.737277e-07
TCGA-TN-A7HJ-01A-12D-A34J-08	141	138	3	108	2.127660e-02	coding only	1	28836876	...	30	100	141	1.040335e-06	3.467782e-06	4.889573e-06	-5.310729e+00	...	7	28780680	...	2.432187e-07
TCGA-TN-A7HL-01A-11D-A34J-08	739	723	16	524	2.165088e-02	coding only	1	28836876	...	199	519	739	6.900886e-06	1.799779e-05	2.562691e-05	-4.591304e+00	...	5	28780680	...	1.737277e-07
TCGA-UF-A718-01A-22D-A34J-08	78	76	2	60	2.564103e-02	coding only	1	28836876	...	16	56	78	5.548451e-07	1.941958e-06	2.704870e-06	-5.567854e+00	...	4	28780680	...	1.389821e-07
TCGA-UF-A719-01A-12D-A34J-08	150	148	2	117	1.333333e-02	coding only	1	28836876	...	31	109	150	1.075012e-06	3.779882e-06	5.201673e-06	-5.283857e+00	...	8	28780680	...	2.779642e-07
TCGA-UF-A71A-01A-22D-A34J-08	237	232	5	168	2.109705e-02	coding only	1	28836876	...	64	161	237	2.219380e-06	5.583129e-06	8.218643e-06	-5.085200e+00	...	7	28780680	...	2.432187e-07
TCGA-UF-A71B-01A-12D-A34J-08	186	185	1	130	5.376344e-03	coding only	1	28836876	...	55	123	184	1.907280e-06	4.265372e-06	6.380719e-06	-5.195130e+00	...	5	28780680	...	1.737277e-07
TCGA-UF-A71D-01A-12D-A34J-08	537	530	7	391	1.303538e-02	coding only	1	28836876	...	139	363	536	4.820217e-06	1.258805e-05	1.858731e-05	-4.730783e+00	...	27	28780680	...	9.381293e-07
TCGA-UF-A71E-01A-31D-A34J-08	196	192	4	136	2.040816e-02	coding only	1	28836876	...	56	131	196	1.941958e-06	4.542794e-06	6.796853e-06	-5.167692e+00	...	5	28780680	...	1.737277e-07
TCGA-UF-A7J9-01A-12D-A34J-08	301	297	4	224	1.328904e-02	coding only	1	28836876	...	73	211	301	2.531481e-06	7.317020e-06	1.043802e-05	-4.981382e+00	...	13	28780680	...	4.516919e-07
TCGA-UF-A7JA-01A-12D-A34J-08	286	284	2	222	6.993007e-03	coding only	1	28836876	...	62	218	286	2.150025e-06	7.559765e-06	9.917857e-06	-5.003582e+00	...	4	28780680	...	1.389821e-07
TCGA-UF-A7JC-01A-21D-A34J-08	66	64	2	51	3.030303e-02	coding only	1	28836876	...	13	46	66	4.508117e-07	1.595180e-06	2.288736e-06	-5.640404e+00	...	5	28780680	...	1.737277e-07
TCGA-UF-A7JD-01A-11D-A34J-08	136	134	2	101	1.470588e-02	coding only	1	28836876	...	33	97	136	1.144368e-06	3.363749e-06	4.716184e-06	-5.326409e+00	...	4	28780680	...	1.389821e-07
TCGA-UF-A7JF-01A-11D-A34J-08	127	124	3	92	2.362205e-02	coding only	1	28836876	...	32	85	127	1.109690e-06	2.947615e-06	4.404083e-06	-5.356144e+00	...	7	28780680	...	2.432187e-07
TCGA-UF-A7JH-01A-21D-A34J-08	95	93	2	68	2.105263e-02	coding only	1	28836876	...	25	61	95	8.669455e-07	2.115347e-06	3.294393e-06	-5.482225e+00	...	6	28780680	...	2.084732e-07
TCGA-UF-A7JJ-01A-11D-A34J-08	118	116	2	94	1.694915e-02	coding only	1	28836876	...	22	87	118	7.629120e-07	3.016970e-06	4.091983e-06	-5.388066e+00	...	7	28780680	...	2.432187e-07
TCGA-UF-A7JK-01A-11D-A34J-08	144	139	5	94	3.472222e-02	exome+100bp flanks	2	35881627	...	45	91	144	1.254124e-06	2.536117e-06	4.013196e-06	-5.396510e+00	...	3	32159724	...	9.328438e-08
TCGA-UF-A7JO-01A-11D-A34J-08	218	214	4	156	1.834862e-02	coding only	1	28836876	...	58	146	218	2.011314e-06	5.062962e-06	7.559765e-06	-5.121492e+00	...	10	28780680	...	3.474553e-07
TCGA-UF-A7JS-01A-11D-A34J-08	83	82	1	59	1.204819e-02	coding only	1	28836876	...	23	55	83	7.975899e-07	1.907280e-06	2.878259e-06	-5.540870e+00	...	4	28780680	...	1.389821e-07
TCGA-UF-A7JT-01A-11D-A34J-08	234	232	2	170	8.547009e-03	coding only	1	28836876	...	62	166	234	2.150025e-06	5.756518e-06	8.114610e-06	-5.090732e+00	...	4	28780680	...	1.389821e-07
TCGA-UF-A7JV-01A-11D-A34J-08	107	103	4	75	3.738318e-02	coding only	1	28836876	...	28	71	107	9.709790e-07	2.462125e-06	3.710527e-06	-5.430564e+00	...	4	28780680	...	1.389821e-07
TCGA-UP-A6WW-01A-12D-A34J-08	48	46	2	35	4.166667e-02	coding only	1	28836876	...	11	32	48	3.814560e-07	1.109690e-06	1.664535e-06	-5.778707e+00	...	3	28780680	...	1.042366e-07
TCGA-WA-A7GZ-01A-11D-A34J-08	256	249	7	187	2.734375e-02	coding only	1	28836876	...	62	174	256	2.150025e-06	6.033941e-06	8.877522e-06	-5.051708e+00	...	13	28780680	...	4.516919e-07
TCGA-WA-A7H4-01A-21D-A34J-08	100	99	1	80	1.000000e-02	coding only	1	28836876	...	19	74	100	6.588786e-07	2.566159e-06	3.467782e-06	-5.459948e+00	...	6	28780680	...	2.084732e-07
