gene1	gene2	pval	qval
FAM18B2	Del_3p14.1	0.000101	1
Del_1q43	Del_3p21.2	0.000104	1
Amp_17q25.2	Del_6q22.31	0.000108	1
VHL	Del_1p31.1	0.000118	1
Amp_7q31.2	Del_6q26	0.000119	1
VHL	Del_13q14.2	0.000143	1
21q-Del	Del_3p21.2	0.000161	1
6q-Del	Amp_7q31.2	0.000164	1
17p-Amp	6q-Del	0.000168	1
12q-Amp	3p-Del	0.000173	1
16p-Amp	Del_3p26.3	0.000177	1
VHL	Del_13q12.13	0.000185	1
7q-Amp	Del_6q26	0.000186	1
17p-Del	Del_3p21.2	0.000186	1
17q-Amp	1p-Del	0.000189	1
PBRM1	1p-Del	0.000194	1
7p-Amp	Del_6q26	0.000216	1
7q-Amp	6q-Del	0.00024	1
FAM18B2	3p-Del	0.000246	1
Amp_7q31.2	Del_6q22.31	0.000263	1
7p-Amp	6q-Del	0.000272	1
Amp_3q26.32	Del_3p21.2	0.000308	1
VHL	20p-Amp	0.000313	1
VHL	20q-Amp	0.000313	1
Amp_5q35.1	Del_2q37.3	0.000317	1
3q-Amp	Del_3p21.2	0.000321	1
Amp_17q25.2	Del_6q26	0.000329	1
PBRM1	Del_1p36.31	0.000356	1
17p-Amp	Del_10q23.31	0.000373	1
17p-Amp	Del_1p36.31	0.00038	1
PBRM1	Del_1q43	0.000381	1
PBRM1	Del_13q14.2	0.000381	1
20p-Amp	3p-Del	0.000384	1
20q-Amp	3p-Del	0.000384	1
17q-Amp	Del_6q26	0.000388	1
12p-Amp	3p-Del	0.000395	1
7q-Amp	Del_6q22.31	0.000399	1
17p-Amp	Del_14q31.1	0.000423	1
3p-Amp	Del_3p14.1	0.000423	1
PBRM1	Del_2q37.3	0.000434	1
VHL	21q-Del	0.000436	1
6p-Del	Amp_17q25.2	0.000439	1
7p-Amp	Del_6q22.31	0.000458	1
17p-Amp	6p-Del	0.000469	1
PBRM1	7q-Amp	0.000504	1
1q-Del	Amp_17q25.2	0.000506	1
17p-Amp	1p-Del	0.000525	1
VHL	3q-Amp	0.000548	1
3q-Amp	Del_3p26.3	0.00056	1
Amp_3q26.32	Del_3p26.3	0.000594	1
16p-Amp	Del_3p21.2	0.000599	1
17q-Amp	6q-Del	0.000638	1
17p-Amp	10q-Del	0.000657	1
6p-Del	Amp_7q31.2	0.000728	1
VHL	6q-Del	0.000815	1
16q-Amp	Del_3p12.2	0.000816	1
1p-Del	Del_3p26.3	0.000852	1
6q-Del	Amp_17q25.2	0.000894	1
16q-Amp	3p-Del	0.000897	1
7p-Amp	3p-Del	0.000976	1
17p-Amp	14q-Del	0.000982	1
7q-Amp	6p-Del	0.00101	1
VHL	Del_6q22.31	0.00103	1
16q-Amp	Del_2q37.3	0.00104	1
MUC5B	VHL	0.00106	1
PBRM1	20p-Amp	0.00108	1
PBRM1	20q-Amp	0.00108	1
7p-Amp	6p-Del	0.00112	1
17p-Amp	Del_13q12.13	0.00115	1
PBRM1	3q-Amp	0.0012	1
7p-Amp	Del_3p14.1	0.00121	1
12q-Amp	Del_3p14.1	0.00124	1
17p-Amp	Del_9p21.3	0.00129	1
VHL	18q-Del	0.00131	1
17p-Amp	17p-Del	0.00144	1
17q-Amp	Del_10q23.31	0.00144	1
16p-Amp	Del_3p14.1	0.00147	1
PBRM1	12p-Amp	0.00157	1
FAM18B2	Del_3p12.2	0.0016	1
Amp_19p13.2	Del_3p21.2	0.0016	1
17q-Amp	1q-Del	0.00162	1
PBRM1	7p-Amp	0.00166	1
17p-Amp	Del_13q14.2	0.0018	1
17q-Amp	6p-Del	0.00181	1
3q-Amp	3p-Del	0.00188	1
PBRM1	13q-Del	0.00192	1
VHL	Del_6q26	0.00201	1
17p-Amp	Del_9p23	0.00201	1
12p-Amp	Del_3p14.1	0.00207	1
Amp_17q25.2	Del_10q23.31	0.00216	1
1q-Del	Amp_5q35.1	0.00221	1
Amp_17q25.2	Del_1q43	0.00221	1
Amp_3q26.32	Del_3p14.1	0.00227	1
VHL	18p-Del	0.00228	1
FAM18B2	PBRM1	0.00231	1
PBRM1	TP53	0.00231	1
1p-Del	Del_3p21.2	0.00231	1
PBRM1	21q-Del	0.00233	1
17p-Del	3p-Del	0.00235	1
17q-Amp	10q-Del	0.00254	1
3p-Del	Amp_7q31.2	0.0026	1
20p-Amp	Del_3p14.1	0.00262	1
20q-Amp	Del_3p14.1	0.00262	1
PBRM1	12q-Amp	0.00284	1
VHL	3p-Amp	0.00287	1
Amp_7q31.2	Del_3p14.1	0.0029	1
PBRM1	Del_13q12.13	0.00294	1
Amp_5q35.1	Del_13q12.13	0.00311	1
3p-Amp	Del_3p12.2	0.00312	1
PBRM1	Amp_2q32.1	0.0032	1
1q-Del	Del_3p12.2	0.00326	1
21q-Del	Del_3p14.1	0.00333	1
21q-Del	Amp_5q35.1	0.00342	1
PBRM1	Del_1p31.1	0.00344	1
17p-Amp	1q-Del	0.00348	1
17p-Amp	9q-Del	0.00348	1
3p-Del	Del_1q43	0.00359	1
17q-Amp	Del_1p36.31	0.00363	1
FAM18B2	Del_14q31.1	0.00371	1
Del_1q43	Del_3p14.1	0.00381	1
17p-Amp	9p-Del	0.00389	1
HNRNPM	Del_3p21.2	0.00393	1
16p-Amp	Del_2q37.3	0.00394	1
PBRM1	16p-Amp	0.00395	1
10q-Del	Amp_17q25.2	0.00398	1
17q-Amp	Del_14q31.1	0.00401	1
PBRM1	3p-Amp	0.00409	1
17p-Amp	13q-Del	0.00433	1
7q-Amp	3p-Del	0.00436	1
17q-Amp	Del_13q12.13	0.00446	1
MUC5B	PBRM1	0.00447	1
VHL	10q-Del	0.00451	1
16q-Amp	Del_10q23.31	0.00466	1
7q-Amp	Del_3p14.1	0.00496	1
12p-Amp	Del_13q14.2	0.00513	1
PBRM1	2q-Amp	0.00522	1
HNRNPM	Del_3p26.3	0.00523	1
3p-Del	Amp_19p13.2	0.00579	1
3q-Amp	Del_3p14.1	0.0058	1
Amp_3q26.32	Del_3p12.2	0.00591	1
FAM18B2	14q-Del	0.00616	1
17q-Amp	8p-Del	0.0062	1
PBRM1	Del_6q22.31	0.00644	1
13q-Del	3p-Del	0.0065	1
7p-Amp	Del_13q14.2	0.00662	1
20p-Amp	Del_13q12.13	0.00688	1
20q-Amp	Del_13q12.13	0.00688	1
17q-Amp	Del_1q43	0.00692	1
17q-Amp	Del_13q14.2	0.00692	1
PBRM1	6p-Del	0.00694	1
12q-Amp	Del_3p12.2	0.00695	1
12q-Amp	Del_13q14.2	0.007	1
13q-Del	Del_3p26.3	0.00742	1
16q-Amp	10q-Del	0.0075	1
3q-Amp	Del_3p12.2	0.00797	1
7q-Amp	Del_2q37.3	0.00807	1
PBRM1	Amp_3q26.32	0.00833	1
MUC5B	Del_3p14.1	0.00849	1
SETD2	Amp_7q31.2	0.00857	1
17q-Amp	14q-Del	0.00873	1
3q-Del	Amp_17q25.2	0.00913	1
12q-Amp	Del_6q26	0.00942	1
7q-Amp	Del_3p12.2	0.00946	1
20p-Amp	Del_13q14.2	0.00954	1
20q-Amp	Del_13q14.2	0.00954	1
13q-Del	Del_3p21.2	0.00976	1
SETD2	6p-Del	0.0098	1
SETD2	7q-Amp	0.0108	1
Amp_3q26.32	Del_10q23.31	0.0108	1
7p-Amp	Del_3p12.2	0.0109	1
16p-Amp	3p-Del	0.0111	1
PBRM1	6q-Del	0.0115	1
SETD2	7p-Amp	0.0116	1
VHL	Amp_19p13.2	0.0117	1
20p-Amp	Del_3p12.2	0.012	1
20q-Amp	Del_3p12.2	0.012	1
MTOR	Amp_17q25.2	0.0121	1
PBRM1	18q-Del	0.0127	1
12p-Amp	Del_3p12.2	0.0127	1
1p-Del	Amp_17q25.2	0.0127	1
Amp_5q35.1	Del_10q23.31	0.0129	1
17p-Amp	8p-Del	0.0131	1
7p-Amp	Del_13q12.13	0.0131	1
Amp_7q31.2	Del_3p12.2	0.0132	1
12q-Amp	Del_6q22.31	0.0135	1
HNRNPM	VHL	0.014	1
TP53	Del_3p26.3	0.0141	1
MET	VHL	0.0142	1
17p-Amp	Amp_5q35.1	0.0143	1
STAG2	Del_3p21.2	0.0144	1
17p-Amp	Del_1q43	0.0144	1
10q-Del	Amp_3q26.32	0.0149	1
13q-Del	Amp_5q35.1	0.0149	1
MUC5B	3p-Del	0.0157	1
17q-Amp	Del_2q37.3	0.0158	1
PBRM1	Del_6q26	0.0159	1
17p-Del	Del_3p14.1	0.016	1
6p-Del	Amp_5q35.1	0.0162	1
17q-Amp	13q-Del	0.0164	1
VHL	Amp_3q26.32	0.0165	1
3p-Del	Amp_3q26.32	0.0171	1
Amp_19p13.2	Del_3p14.1	0.0172	1
16p-Amp	Del_3p12.2	0.0173	1
HNRNPM	Del_3p14.1	0.0181	1
1p-Del	Amp_5q35.1	0.0181	1
PBRM1	18p-Del	0.0182	1
20p-Amp	13q-Del	0.0182	1
20q-Amp	13q-Del	0.0182	1
FAM18B2	Del_6q26	0.0185	1
FAM18B2	10q-Del	0.0188	1
17q-Amp	3q-Del	0.0188	1
Amp_7q31.2	Del_2q37.3	0.0188	1
Amp_17q25.2	Del_1p31.1	0.0188	1
STAG2	Del_3p26.3	0.019	1
VHL	Del_10q23.31	0.019	1
Amp_17q25.2	Del_2q37.3	0.0194	1
Amp_5q35.1	Del_1p31.1	0.0201	1
MTOR	Del_10q23.31	0.0202	1
Amp_5q35.1	Del_13q14.2	0.0203	1
SETD2	17p-Amp	0.021	1
21q-Del	3p-Del	0.0213	1
Amp_7q31.2	Del_1p31.1	0.0214	1
NF2	PBRM1	0.0223	1
10q-Del	Amp_5q35.1	0.0225	1
MTOR	17q-Amp	0.0239	1
FAM18B2	Del_6q22.31	0.0242	1
PBRM1	Amp_19p13.2	0.0245	1
HNRNPM	3p-Del	0.0251	1
3p-Amp	Del_1p36.31	0.0252	1
17p-Amp	Del_8p23.2	0.0253	1
7p-Amp	Del_2q37.3	0.0255	1
12p-Amp	Del_13q12.13	0.0256	1
17q-Amp	17p-Del	0.0256	1
16q-Amp	Del_6q26	0.0258	1
NEFH	VHL	0.0263	1
Amp_17q25.2	Del_13q12.13	0.0265	1
MTOR	16p-Amp	0.0267	1
MTOR	10q-Del	0.0267	1
SETD2	Del_13q14.2	0.0269	1
TP53	17p-Amp	0.027	1
12q-Amp	Del_2q37.3	0.0272	1
Amp_7q31.2	Del_13q12.13	0.0272	1
7q-Amp	Del_1p31.1	0.028	1
Del_1q43	Del_3p12.2	0.028	1
VHL	Del_19p13.3	0.0286	1
Amp_3q26.32	Del_1p31.1	0.0286	1
FAM18B2	17p-Del	0.0287	1
PBRM1	Del_10q23.31	0.0301	1
17p-Amp	3q-Del	0.0301	1
FAM18B2	8p-Del	0.0305	1
7p-Amp	Del_1p31.1	0.0306	1
12p-Amp	Del_6q22.31	0.0321	1
12p-Amp	8p-Del	0.0323	1
17p-Amp	Del_2q37.3	0.0325	1
7q-Amp	Del_14q31.1	0.0328	1
PTEN	VHL	0.0331	1
3p-Amp	Del_1p31.1	0.0336	1
7q-Amp	Del_13q12.13	0.0337	1
12q-Amp	Del_13q12.13	0.0338	1
16p-Amp	Del_10q23.31	0.0343	1
7p-Amp	Del_14q31.1	0.0358	1
8p-Del	Amp_17q25.2	0.0359	1
Amp_5q35.1	Amp_17q25.2	0.0362	1
16q-Amp	Del_6q22.31	0.0368	1
MTOR	17p-Amp	0.0372	1
1q-Del	Amp_3q26.32	0.0387	1
MTOR	17p-Del	0.0393	1
Amp_17q25.2	Del_13q14.2	0.0397	1
12q-Amp	6q-Del	0.0402	1
16p-Amp	Del_6q22.31	0.0403	1
17q-Amp	Del_8p23.2	0.0404	1
MTOR	16q-Amp	0.0415	1
12q-Amp	8p-Del	0.042	1
KDM5C	16p-Amp	0.0424	1
SETD2	1q-Del	0.0437	1
5p-Amp	1q-Del	0.0437	1
5q-Amp	1q-Del	0.0437	1
Amp_7q31.2	Del_13q14.2	0.0437	1
MTOR	Del_1q43	0.0438	1
13q-Del	Del_3p14.1	0.0446	1
13q-Del	Amp_7q31.2	0.045	1
7p-Amp	9q-Del	0.0451	1
21q-Del	Del_3p12.2	0.0451	1
PBRM1	Del_16q23.3	0.0459	1
FAM18B2	9q-Del	0.0464	1
17p-Del	Amp_5q35.1	0.0469	1
SYNE1	VHL	0.0473	1
17q-Amp	Amp_5q35.1	0.0479	1
16q-Amp	Del_13q12.13	0.049	1
Amp_5q35.1	Del_6q22.31	0.0498	1
HNRNPM	Del_3p12.2	0.0507	1
20p-Amp	17p-Del	0.0509	1
20q-Amp	17p-Del	0.0509	1
Del_1p31.1	Del_3p26.3	0.0509	1
SETD2	13q-Del	0.0512	1
16p-Amp	10q-Del	0.0517	1
FAM18B2	13q-Del	0.0522	1
MUC5B	Del_3p21.2	0.0522	1
16q-Amp	Del_9p21.3	0.0529	1
7q-Amp	Del_13q14.2	0.053	1
17q-Amp	9q-Del	0.0533	1
7q-Amp	13q-Del	0.0536	1
Amp_5q35.1	Del_1p36.31	0.0542	1
FAM18B2	6q-Del	0.0556	1
TP53	Del_3p21.2	0.0559	1
17p-Amp	Del_4q34.3	0.0566	1
PBRM1	10q-Del	0.0567	1
7p-Amp	13q-Del	0.0568	1
MET	Del_3p21.2	0.0569	1
16q-Amp	17p-Del	0.0571	1
Amp_5q35.1	Del_1q43	0.0573	1
Amp_17q25.2	Del_1p36.31	0.0579	1
HNRNPM	PBRM1	0.0583	1
SETD2	Del_2q37.3	0.0592	1
5q-Amp	Del_2q37.3	0.0592	1
6p-Del	Amp_2q32.1	0.0593	1
MTOR	1q-Del	0.0608	1
STAG2	Del_3p14.1	0.0611	1
1p-Del	Amp_2q32.1	0.0618	1
KDM5C	16q-Amp	0.0623	1
Amp_17q25.2	Del_14q31.1	0.0626	1
SETD2	Del_6q22.31	0.0627	1
16q-Amp	Del_1p31.1	0.0634	1
12p-Amp	13q-Del	0.0637	1
12p-Amp	Del_6q26	0.064	1
VHL	ZNF814	0.0647	1
VHL	Del_16q23.3	0.0647	1
16p-Amp	Del_6q26	0.0651	1
3q-Amp	Del_1q43	0.0654	1
NEFH	Del_6q26	0.0659	1
Del_10q23.31	Del_14q31.1	0.066	1
1p-Del	Amp_7q31.2	0.0664	1
SETD2	6q-Del	0.0665	1
16q-Amp	Del_13q14.2	0.0665	1
MTOR	13q-Del	0.0677	1
3q-Amp	Del_9p23	0.0686	1
12q-Amp	9q-Del	0.0688	1
1p-Del	3p-Del	0.0689	1
3p-Amp	1p-Del	0.0696	1
7q-Amp	14q-Del	0.0705	1
12q-Amp	6p-Del	0.0712	1
16q-Amp	Del_9p23	0.0717	1
17q-Amp	Del_9p21.3	0.0718	1
Del_1p31.1	Del_3p21.2	0.0721	1
SETD2	Del_13q12.13	0.073	1
5q-Amp	Del_13q12.13	0.073	1
Amp_19p13.2	Del_2q37.3	0.073	1
MET	Del_3p26.3	0.0736	1
MUC5B	Del_3p26.3	0.0741	1
1p-Del	Amp_3q26.32	0.0751	1
2q-Amp	6p-Del	0.0754	1
Amp_19p13.2	Del_3p12.2	0.0756	1
STAG2	Amp_7q31.2	0.0757	1
12p-Amp	Del_2q37.3	0.0759	1
7p-Amp	14q-Del	0.0759	1
NEFH	Del_6q22.31	0.0761	1
16p-Amp	Del_13q12.13	0.0766	1
17p-Amp	5p-Amp	0.0781	1
2q-Amp	1p-Del	0.0783	1
VHL	Del_11q21	0.0785	1
FAM18B2	Del_10q23.31	0.0788	1
12q-Amp	13q-Del	0.079	1
7q-Amp	1p-Del	0.0807	1
MET	PBRM1	0.0815	1
STAG2	7q-Amp	0.0818	1
STAG2	3p-Del	0.0825	1
Amp_19p13.2	Del_13q12.13	0.0826	1
STAG2	7p-Amp	0.0839	1
13q-Del	Del_3p12.2	0.0847	1
13q-Del	Amp_17q25.2	0.0849	1
9q-Del	Amp_7q31.2	0.0853	1
17p-Del	Amp_17q25.2	0.0855	1
7p-Amp	1p-Del	0.086	1
3q-Amp	1q-Del	0.0869	1
3q-Amp	9q-Del	0.0869	1
12p-Amp	6q-Del	0.0872	1
MTOR	7p-Amp	0.0878	1
3q-Amp	Del_1p31.1	0.0882	1
17p-Del	Del_14q31.1	0.0909	1
TP53	17q-Amp	0.0911	1
3q-Amp	9p-Del	0.0911	1
Amp_2q32.1	Del_6q26	0.0917	1
Amp_19p13.2	Del_6q26	0.0917	1
3p-Amp	Del_13q12.13	0.0918	1
6q-Del	Amp_5q35.1	0.0925	1
17p-Del	Del_3p12.2	0.093	1
16q-Amp	Del_1p36.31	0.0938	1
SMARCA4	Del_14q31.1	0.0946	1
Amp_7q31.2	Del_14q31.1	0.0954	1
3p-Amp	Del_9p21.3	0.0955	1
FAM18B2	Del_8p23.2	0.0956	1
GALNT7	Del_3p14.1	0.0973	1
Amp_2q32.1	Del_1q43	0.0973	1
Amp_19p13.2	Del_13q14.2	0.0973	1
17q-Amp	Del_9p23	0.0982	1
Amp_17q25.2	Del_8p23.2	0.0988	1
3p-Amp	17p-Del	0.0993	1
KDM5C	21q-Del	0.1	1
7q-Amp	9q-Del	0.1	1
ATM	14q-Del	0.101	1
NTRK3	Del_3p21.2	0.101	1
TDG	Del_3p21.2	0.101	1
PTEN	Del_14q31.1	0.102	1
10q-Del	Del_14q31.1	0.102	1
1p-Del	Del_3p14.1	0.102	1
16q-Amp	9q-Del	0.103	1
6p-Del	Del_3p26.3	0.103	1
16p-Amp	Del_1q43	0.104	1
16p-Amp	Del_13q14.2	0.104	1
7q-Amp	8p-Del	0.104	1
16q-Amp	6q-Del	0.105	1
3p-Amp	Del_6q26	0.105	1
SETD2	Del_6q26	0.107	1
3p-Amp	Del_1q43	0.107	1
3p-Amp	Del_13q14.2	0.107	1
VHL	Del_11q23.1	0.109	1
Amp_2q32.1	Del_6q22.31	0.109	1
Amp_19p13.2	Del_6q22.31	0.109	1
FAM18B2	Amp_5q35.1	0.11	1
16q-Amp	9p-Del	0.111	1
3p-Amp	Del_9p23	0.112	1
ATM	Amp_17q25.2	0.113	1
VHL	Amp_2q32.1	0.113	1
14q-Del	Amp_17q25.2	0.113	1
NTRK3	Del_3p26.3	0.114	1
VHL	Del_4q34.3	0.114	1
14q-Del	Del_10q23.31	0.114	1
VHL	ZNF598	0.115	1
Amp_2q32.1	Del_14q31.1	0.116	1
SMARCA4	14q-Del	0.117	1
7p-Amp	Del_1p36.31	0.117	1
PTEN	12p-Amp	0.118	1
ZFYVE26	Del_3p26.3	0.118	1
16q-Amp	13q-Del	0.119	1
2q-Amp	Del_1q43	0.119	1
KDM5C	6q-Del	0.12	1
NEFH	6q-Del	0.12	1
STAM	VHL	0.12	1
KDM5C	20p-Amp	0.121	1
KDM5C	20q-Amp	0.121	1
MTOR	1p-Del	0.121	1
16p-Amp	6q-Del	0.121	1
2q-Amp	Del_6q26	0.121	1
Del_2q37.3	Del_14q31.1	0.121	1
Amp_5q35.1	Del_6q26	0.122	1
3p-Amp	Del_6q22.31	0.124	1
1q-Del	Amp_2q32.1	0.124	1
SETD2	3p-Amp	0.125	1
12q-Amp	Del_14q31.1	0.126	1
NEFH	Del_3p26.3	0.128	1
17p-Amp	Del_11q23.1	0.13	1
PIK3CA	Del_6q26	0.131	1
SETD2	Del_8p23.2	0.131	1
Amp_3q26.32	Del_1q43	0.131	1
3p-Amp	Del_14q31.1	0.132	1
FAM18B2	Del_9p21.3	0.133	1
3q-Del	Amp_3q26.32	0.133	1
PTEN	12q-Amp	0.134	1
13q-Del	Amp_2q32.1	0.134	1
13q-Del	Amp_19p13.2	0.134	1
PTEN	14q-Del	0.135	1
MUC5B	Del_3p12.2	0.136	1
STAM	Del_3p14.1	0.136	1
3p-Amp	1q-Del	0.136	1
3p-Amp	9q-Del	0.136	1
Del_2q37.3	Del_3p26.3	0.136	1
ZNF598	Del_3p14.1	0.137	1
Del_2q37.3	Del_3p21.2	0.138	1
FAM18B2	TP53	0.141	1
2q-Amp	Del_6q22.31	0.141	1
3p-Amp	9p-Del	0.141	1
Amp_2q32.1	Del_1p31.1	0.142	1
Amp_19p13.2	Del_1p31.1	0.142	1
MTOR	Del_2q37.3	0.143	1
CSGALNACT2	Del_3p21.2	0.144	1
14q-Del	17p-Del	0.144	1
6q-Del	Amp_3q26.32	0.144	1
12p-Amp	6p-Del	0.145	1
3p-Amp	Amp_5q35.1	0.145	1
NEFH	Del_10q23.31	0.146	1
NF2	Del_10q23.31	0.146	1
PIK3CA	Del_6q22.31	0.146	1
3p-Amp	13q-Del	0.146	1
16p-Amp	Del_1p31.1	0.147	1
2q-Amp	1q-Del	0.148	1
Amp_3q26.32	Del_6q26	0.148	1
20p-Amp	Del_6q22.31	0.15	1
20q-Amp	Del_6q22.31	0.15	1
CSGALNACT2	PBRM1	0.151	1
14q-Del	Amp_2q32.1	0.151	1
HNRNPM	Del_14q31.1	0.152	1
KDM6A	VHL	0.152	1
NFE2L2	VHL	0.152	1
10q-Del	Amp_7q31.2	0.152	1
FAM18B2	Del_1q43	0.153	1
FAM18B2	Del_13q14.2	0.153	1
12p-Amp	1p-Del	0.153	1
12q-Amp	Del_9p23	0.153	1
17q-Amp	9p-Del	0.153	1
NEFH	6p-Del	0.154	1
STAG2	Del_3p12.2	0.154	1
ZNF598	Del_6q26	0.155	1
17p-Del	Amp_7q31.2	0.155	1
3q-Amp	Del_10q23.31	0.156	1
6p-Del	Del_3p21.2	0.156	1
ATM	17q-Amp	0.158	1
16q-Amp	3q-Del	0.158	1
TP53	Amp_17q25.2	0.159	1
16p-Amp	1q-Del	0.159	1
2q-Amp	13q-Del	0.159	1
Amp_7q31.2	Del_19p13.3	0.159	1
CSK	Del_3p21.2	0.16	1
FAM18B2	Del_9p23	0.16	1
STAM	3p-Del	0.16	1
16q-Amp	8p-Del	0.16	1
5p-Amp	13q-Del	0.16	1
5q-Amp	13q-Del	0.16	1
12q-Amp	Del_10q23.31	0.163	1
9q-Del	Amp_17q25.2	0.163	1
Del_1p36.31	Del_3p26.3	0.163	1
20p-Amp	Del_14q31.1	0.164	1
20q-Amp	Del_14q31.1	0.164	1
CSGALNACT2	Del_3p26.3	0.165	1
MET	17p-Del	0.165	1
SMARCA4	Del_10q23.31	0.165	1
10q-Del	14q-Del	0.165	1
NEFH	10q-Del	0.167	1
NF2	10q-Del	0.167	1
ZNF598	Del_3p21.2	0.167	1
KDM5C	6p-Del	0.168	1
MTOR	Del_1p31.1	0.168	1
7q-Amp	Del_19p13.3	0.168	1
12p-Amp	1q-Del	0.169	1
12p-Amp	9q-Del	0.169	1
3p-Amp	14q-Del	0.169	1
MET	8p-Del	0.17	1
16q-Amp	Del_1q43	0.17	1
5p-Amp	21q-Del	0.17	1
5q-Amp	21q-Del	0.17	1
CYP4F11	VHL	0.171	1
GPR50	VHL	0.171	1
SLC6A14	VHL	0.171	1
ZNF598	3p-Del	0.171	1
7p-Amp	Del_19p13.3	0.171	1
1q-Del	Amp_7q31.2	0.171	1
ZNF598	Del_6q22.31	0.172	1
PIK3CA	Del_1p31.1	0.173	1
KDM5C	1p-Del	0.175	1
PBRM1	Del_11q23.1	0.175	1
3q-Amp	1p-Del	0.175	1
Amp_7q31.2	Del_10q23.31	0.175	1
CSK	Del_3p26.3	0.176	1
MET	Del_1q43	0.176	1
MUC5B	3q-Del	0.176	1
GALNT7	Del_3p12.2	0.177	1
ZNF598	Del_14q31.1	0.178	1
17p-Amp	Del_11q21	0.178	1
2q-Amp	Del_1p31.1	0.178	1
7q-Amp	10q-Del	0.178	1
14q-Del	Amp_7q31.2	0.178	1
7q-Amp	17p-Del	0.179	1
Amp_3q26.32	Del_6q22.31	0.179	1
7q-Amp	Del_1p36.31	0.18	1
HNRNPM	14q-Del	0.181	1
3q-Amp	Del_8p23.2	0.181	1
16p-Amp	13q-Del	0.182	1
5p-Amp	Del_13q12.13	0.183	1
6q-Del	Amp_2q32.1	0.183	1
6q-Del	Amp_19p13.2	0.183	1
12q-Amp	14q-Del	0.184	1
STAG2	Del_10q23.31	0.186	1
ZNF814	Del_3p12.2	0.186	1
Amp_3q26.32	Del_1p36.31	0.186	1
SMARCA4	10q-Del	0.187	1
7p-Amp	10q-Del	0.187	1
16q-Amp	1p-Del	0.188	1
3q-Amp	10q-Del	0.188	1
7p-Amp	17p-Del	0.188	1
MTOR	Amp_7q31.2	0.189	1
ZNF598	Amp_5q35.1	0.189	1
12q-Amp	1p-Del	0.189	1
14q-Del	Del_2q37.3	0.189	1
NTRK3	Del_3p14.1	0.19	1
NUDT11	Del_3p14.1	0.19	1
SLC6A14	Del_3p14.1	0.19	1
TDG	Del_3p14.1	0.19	1
13q-Del	Amp_3q26.32	0.191	1
KDM5C	Amp_3q26.32	0.192	1
MTOR	Del_13q14.2	0.192	1
NEFH	Del_13q12.13	0.192	1
NF2	Del_13q12.13	0.192	1
PBRM1	Amp_Xp11.4	0.192	1
KDM5C	Del_6q22.31	0.193	1
17p-Amp	5q-Amp	0.193	1
Amp_3q26.32	Del_14q31.1	0.193	1
16q-Amp	Del_14q31.1	0.194	1
ZNF598	Del_3p26.3	0.195	1
12p-Amp	Del_14q31.1	0.195	1
7q-Amp	1q-Del	0.195	1
ATM	17p-Amp	0.197	1
SMARCA4	Del_2q37.3	0.197	1
16p-Amp	17p-Del	0.197	1
16q-Amp	Del_8p23.2	0.198	1
KDM5C	Del_1p36.31	0.199	1
ADCY8	VHL	0.2	1
FAM18B2	1q-Del	0.2	1
Del_3p12.2	Del_13q14.2	0.2	1
KDM5C	Del_2q37.3	0.201	1
NEFH	17p-Del	0.202	1
NF2	17p-Del	0.202	1
12q-Amp	1q-Del	0.202	1
3p-Amp	6q-Del	0.202	1
3p-Del	Amp_2q32.1	0.202	1
7p-Amp	1q-Del	0.203	1
7p-Amp	8p-Del	0.203	1
SETD2	17p-Del	0.204	1
5p-Amp	Del_1p31.1	0.204	1
5q-Amp	Del_1p31.1	0.204	1
7q-Amp	Del_10q23.31	0.204	1
GALNT7	Del_3p21.2	0.205	1
MET	Del_3p14.1	0.205	1
PIK3CA	6q-Del	0.205	1
Del_3p26.3	Del_13q12.13	0.206	1
PBRM1	ZNF814	0.207	1
9q-Del	Amp_5q35.1	0.207	1
MTOR	7q-Amp	0.208	1
NEFH	8p-Del	0.208	1
12q-Amp	10q-Del	0.208	1
16p-Amp	6p-Del	0.208	1
6p-Del	Amp_3q26.32	0.208	1
FAM18B2	9p-Del	0.209	1
ZNF598	14q-Del	0.209	1
16p-Amp	8p-Del	0.209	1
FAM18B2	KDM5C	0.21	1
KDM5C	TP53	0.21	1
STAG2	10q-Del	0.21	1
MET	1q-Del	0.211	1
12q-Amp	9p-Del	0.212	1
SMARCA4	Del_13q12.13	0.213	1
17p-Amp	18q-Del	0.213	1
NEFH	Del_13q14.2	0.214	1
NF2	Del_1q43	0.214	1
NF2	Del_13q14.2	0.214	1
SETD2	16q-Amp	0.215	1
3p-Amp	18q-Del	0.215	1
7p-Amp	Del_10q23.31	0.215	1
KDM6A	3p-Del	0.216	1
NTRK3	3p-Del	0.218	1
TDG	3p-Del	0.218	1
ZFYVE26	Del_6q26	0.218	1
KDM6A	Amp_5q35.1	0.22	1
SYNE1	3q-Del	0.22	1
ZNF814	6p-Del	0.22	1
3q-Amp	3q-Del	0.22	1
Amp_5q35.1	Del_19p13.3	0.22	1
7p-Amp	9p-Del	0.221	1
ATM	Amp_7q31.2	0.224	1
KDM5C	Del_13q12.13	0.224	1
MET	13q-Del	0.224	1
NF2	Amp_7q31.2	0.224	1
SMARCA4	17p-Del	0.224	1
2q-Amp	6q-Del	0.224	1
KDM6A	Del_3p21.2	0.225	1
NFE2L2	Del_3p21.2	0.225	1
3q-Amp	Amp_5q35.1	0.225	1
Amp_3q26.32	Del_8p23.2	0.225	1
SETD2	Del_1q43	0.227	1
STAM	Del_3p12.2	0.227	1
5p-Amp	Del_13q14.2	0.227	1
5q-Amp	Del_13q14.2	0.227	1
GALNT7	Del_3p26.3	0.23	1
TP53	Del_14q31.1	0.231	1
20p-Amp	14q-Del	0.231	1
20q-Amp	14q-Del	0.231	1
3p-Amp	18p-Del	0.231	1
3q-Amp	Del_9p21.3	0.232	1
10q-Del	Del_3p26.3	0.233	1
ZNF598	6q-Del	0.234	1
PTEN	Del_8p23.2	0.235	1
ZNF814	Del_3p21.2	0.235	1
Del_3p21.2	Del_16q23.3	0.235	1
SMARCA4	Del_1q43	0.236	1
SMARCA4	Del_13q14.2	0.236	1
20p-Amp	Del_6q26	0.236	1
20q-Amp	Del_6q26	0.236	1
HNRNPM	Del_10q23.31	0.237	1
PIK3CA	Del_10q23.31	0.237	1
ZFYVE26	Del_6q22.31	0.237	1
Del_3p26.3	Del_11q23.1	0.237	1
ATM	7q-Amp	0.238	1
NF2	7q-Amp	0.238	1
KDM5C	17p-Del	0.24	1
KDM5C	MTOR	0.241	1
MTOR	3q-Amp	0.241	1
16q-Amp	1q-Del	0.241	1
6p-Del	Amp_19p13.2	0.241	1
FAM18B2	6p-Del	0.242	1
STAG2	17p-Amp	0.242	1
ATM	7p-Amp	0.243	1
KDELR3	PBRM1	0.243	1
NF2	7p-Amp	0.243	1
PBRM1	PRKAG2	0.243	1
PBRM1	Amp_Xp22.2	0.243	1
STXBP3	VHL	0.243	1
12p-Amp	17p-Del	0.243	1
17p-Amp	18p-Del	0.243	1
PTEN	Del_3p21.2	0.244	1
ZFYVE26	Del_14q31.1	0.245	1
ZNF814	Del_2q37.3	0.245	1
PIK3CA	6p-Del	0.247	1
3p-Amp	Del_10q23.31	0.248	1
3q-Amp	8p-Del	0.248	1
1p-Del	Amp_19p13.2	0.248	1
NF2	VHL	0.251	1
PIK3CA	1p-Del	0.252	1
3p-Del	Del_13q12.13	0.252	1
CDKN2A	Del_3p21.2	0.253	1
HSPA2	Del_3p21.2	0.253	1
KRAS	Del_3p21.2	0.253	1
MTOR	12p-Amp	0.253	1
PRODH	Del_3p21.2	0.253	1
Xp-Del	Del_3p21.2	0.253	1
Amp_3q26.32	Del_2q37.3	0.253	1
SETD2	17q-Amp	0.255	1
17q-Amp	5p-Amp	0.255	1
5p-Amp	1p-Del	0.255	1
5q-Amp	1p-Del	0.255	1
14q-Del	Amp_3q26.32	0.255	1
KDM6A	Del_3p26.3	0.256	1
NFE2L2	Del_3p26.3	0.256	1
2q-Amp	Del_3p12.2	0.256	1
HNRNPM	Del_8p23.2	0.257	1
KDM5C	Del_1q43	0.257	1
KDM5C	Del_13q14.2	0.257	1
NF1	Amp_17q25.2	0.258	1
MET	Amp_5q35.1	0.259	1
CSGALNACT2	VHL	0.26	1
DPCR1	VHL	0.26	1
STAG2	Del_1q43	0.26	1
TP53	3p-Del	0.26	1
6p-Del	Del_14q31.1	0.26	1
HNRNPM	10q-Del	0.263	1
MET	3p-Del	0.263	1
PIK3CA	16p-Amp	0.263	1
PIK3CA	10q-Del	0.263	1
3p-Amp	6p-Del	0.263	1
10q-Del	Amp_19p13.2	0.263	1
VHL	Del_9p21.3	0.264	1
CSK	Del_3p14.1	0.265	1
EMG1	Del_3p14.1	0.265	1
NEFH	13q-Del	0.265	1
NF2	13q-Del	0.265	1
12p-Amp	Del_10q23.31	0.266	1
NFE2L2	6q-Del	0.267	1
12p-Amp	Del_1q43	0.267	1
5p-Amp	Amp_17q25.2	0.267	1
ZFYVE26	Del_1p31.1	0.269	1
ZNF598	Del_3p12.2	0.269	1
Del_1p36.31	Del_3p21.2	0.27	1
CDKN2A	Del_3p26.3	0.272	1
ENO1	Del_3p26.3	0.272	1
HSPA2	Del_3p26.3	0.272	1
KRAS	Del_3p26.3	0.272	1
PRODH	Del_3p26.3	0.272	1
ZNF814	Del_3p26.3	0.272	1
Xp-Del	Del_3p26.3	0.272	1
Del_3p26.3	Del_16q23.3	0.272	1
MTOR	21q-Del	0.273	1
HNRNPM	Del_2q37.3	0.274	1
PIK3CA	Del_2q37.3	0.274	1
SMARCA4	1q-Del	0.274	1
12p-Amp	14q-Del	0.274	1
12q-Amp	Del_9p21.3	0.274	1
20p-Amp	Del_2q37.3	0.274	1
20q-Amp	Del_2q37.3	0.274	1
PBRM1	Del_11q21	0.275	1
18q-Del	Amp_5q35.1	0.277	1
3p-Del	Del_2q37.3	0.277	1
SETD2	5p-Amp	0.278	1
SETD2	5q-Amp	0.278	1
ZFYVE26	14q-Del	0.278	1
ZNF598	6p-Del	0.278	1
3p-Amp	Del_8p23.2	0.278	1
16q-Amp	14q-Del	0.279	1
FAM18B2	Del_1p31.1	0.28	1
12p-Amp	Del_9p23	0.28	1
8p-Del	Amp_7q31.2	0.281	1
ZNF598	1p-Del	0.283	1
Amp_3q26.32	Del_13q12.13	0.283	1
MTOR	12q-Amp	0.284	1
KDM5C	Amp_7q31.2	0.285	1
20p-Amp	3q-Del	0.285	1
20q-Amp	3q-Del	0.285	1
CSGALNACT2	Del_14q31.1	0.286	1
3p-Amp	10q-Del	0.286	1
12q-Amp	17p-Del	0.287	1
Amp_2q32.1	Del_3p14.1	0.287	1
KDELR3	Del_3p21.2	0.288	1
SMARCA4	13q-Del	0.288	1
STAM	Del_3p21.2	0.288	1
ZNF598	Del_8p23.2	0.288	1
16p-Amp	3q-Del	0.288	1
Amp_Xp22.2	Del_3p21.2	0.288	1
FAM18B2	Del_2q37.3	0.289	1
KDM5C	3q-Amp	0.289	1
KDM5C	Del_4q34.3	0.289	1
MTOR	Del_1p36.31	0.29	1
3p-Amp	3q-Del	0.29	1
CSGALNACT2	Del_3p14.1	0.291	1
FGFR3	Del_3p12.2	0.291	1
HNRNPM	Del_13q12.13	0.291	1
NTRK3	Del_3p12.2	0.291	1
NUDT11	Del_3p12.2	0.291	1
PTEN	Del_9p21.3	0.291	1
SLC6A14	Del_3p12.2	0.291	1
TDG	Del_3p12.2	0.291	1
20p-Amp	6q-Del	0.291	1
20q-Amp	6q-Del	0.291	1
KDM5C	Amp_17q25.2	0.292	1
Amp_2q32.1	Del_3p21.2	0.292	1
PBRM1	ZNF598	0.294	1
SETD2	3q-Amp	0.294	1
CSK	3p-Del	0.295	1
EMG1	3p-Del	0.295	1
SMARCA4	21q-Del	0.295	1
3p-Del	Amp_Xq11.2	0.295	1
Amp_2q32.1	Del_1p36.31	0.296	1
HNRNPM	Del_9p21.3	0.297	1
MTOR	Amp_2q32.1	0.297	1
MTOR	Amp_19p13.2	0.297	1
PIK3CA	Del_9p21.3	0.297	1
MUC5B	Del_14q31.1	0.298	1
NEFH	Del_1p36.31	0.298	1
PTEN	Amp_5q35.1	0.298	1
TP53	14q-Del	0.298	1
ZFYVE26	Del_3p21.2	0.298	1
Del_3p21.2	Del_13q12.13	0.298	1
DPCR1	Amp_5q35.1	0.299	1
PBRM1	Del_9p21.3	0.299	1
STAG2	1q-Del	0.299	1
Amp_7q31.2	Del_1q43	0.301	1
3p-Amp	Del_2q37.3	0.302	1
HNRNPM	17p-Del	0.303	1
SMARCA4	VHL	0.303	1
ATM	Del_14q31.1	0.304	1
17p-Del	Amp_3q26.32	0.304	1
Amp_2q32.1	Del_13q12.13	0.304	1
ZFYVE26	6q-Del	0.305	1
ZNF598	Del_2q37.3	0.305	1
5p-Amp	Del_2q37.3	0.305	1
TP53	Del_3p14.1	0.306	1
PTCH1	Del_6q26	0.307	1
Amp_Xp11.4	Del_6q26	0.307	1
GPR50	PBRM1	0.308	1
NUDT11	PBRM1	0.308	1
PBRM1	TDG	0.308	1
PTEN	8p-Del	0.308	1
12q-Amp	Del_1p31.1	0.308	1
HNRNPM	8p-Del	0.309	1
PIK3CA	16q-Amp	0.309	1
SETD2	Amp_5q35.1	0.31	1
Amp_3q26.32	Del_11q23.1	0.31	1
16p-Amp	Del_14q31.1	0.311	1
NFE2L2	6p-Del	0.312	1
MTOR	3p-Amp	0.313	1
12q-Amp	Del_1q43	0.313	1
KDM5C	1q-Del	0.314	1
HNRNPM	Del_1q43	0.315	1
HNRNPM	Del_13q14.2	0.315	1
KDELR3	Del_3p26.3	0.315	1
PIK3CA	Del_1q43	0.315	1
STAM	Del_3p26.3	0.315	1
12p-Amp	Del_8p23.2	0.315	1
8p-Del	Amp_3q26.32	0.315	1
Amp_Xp22.2	Del_3p26.3	0.315	1
NEFH	PBRM1	0.316	1
MTOR	20p-Amp	0.318	1
MTOR	20q-Amp	0.318	1
NF1	17q-Amp	0.318	1
FAM18B2	Del_13q12.13	0.32	1
10q-Del	Del_3p21.2	0.32	1
18p-Del	Amp_5q35.1	0.32	1
CSGALNACT2	14q-Del	0.321	1
KDM6A	Del_3p12.2	0.321	1
SETD2	9p-Del	0.321	1
STAG2	21q-Del	0.321	1
VHL	2q-Amp	0.321	1
HNRNPM	Del_9p23	0.322	1
PIK3CA	Del_9p23	0.322	1
16q-Amp	6p-Del	0.322	1
17p-Del	Amp_2q32.1	0.322	1
17p-Del	Amp_19p13.2	0.322	1
3p-Del	Del_1p31.1	0.322	1
NFE2L2	Del_8p23.2	0.323	1
PTEN	3p-Del	0.323	1
ZNF598	Del_13q12.13	0.323	1
Amp_5q35.1	Del_9p21.3	0.323	1
KDM5C	12p-Amp	0.324	1
MUC5B	Amp_5q35.1	0.324	1
SYNE1	12p-Amp	0.324	1
Amp_7q31.2	Del_11q23.1	0.325	1
2q-Amp	Del_2q37.3	0.326	1
PTCH1	Del_6q22.31	0.327	1
PTEN	Del_9p23	0.327	1
18p-Del	Amp_3q26.32	0.327	1
Amp_3q26.32	Del_13q14.2	0.327	1
Amp_Xp11.4	Del_6q22.31	0.327	1
12p-Amp	10q-Del	0.328	1
Del_3p12.2	Del_13q12.13	0.328	1
MTOR	2q-Amp	0.329	1
Del_3p26.3	Del_13q14.2	0.329	1
GALNT7	Del_1p36.31	0.331	1
8p-Del	Amp_2q32.1	0.331	1
8p-Del	Amp_19p13.2	0.331	1
EGFR	Amp_7q31.2	0.333	1
SMARCA4	Del_1p36.31	0.333	1
STAM	Amp_7q31.2	0.333	1
16p-Amp	Del_9p21.3	0.333	1
Amp_7q31.2	Del_16q23.3	0.334	1
GALNT7	Del_14q31.1	0.335	1
KDM5C	13q-Del	0.335	1
RAI1	VHL	0.335	1
RAI1	Del_14q31.1	0.335	1
ZNF598	17p-Del	0.335	1
Amp_7q31.2	Del_1p36.31	0.335	1
CSGALNACT2	3p-Del	0.336	1
DPCR1	3p-Del	0.336	1
7q-Amp	Del_1q43	0.336	1
5q-Amp	Del_6q26	0.339	1
NFE2L2	Del_2q37.3	0.34	1
Amp_2q32.1	Del_13q14.2	0.34	1
Amp_19p13.2	Del_1q43	0.34	1
Del_3p21.2	Del_13q14.2	0.34	1
NEFH	Del_1p31.1	0.341	1
ZFYVE26	Del_10q23.31	0.341	1
ZNF598	8p-Del	0.341	1
ZNF814	13q-Del	0.341	1
HNRNPM	SETD2	0.342	1
PIK3CA	SETD2	0.342	1
3p-Del	Del_1p36.31	0.343	1
EGFR	7q-Amp	0.344	1
PRKAG2	7q-Amp	0.344	1
STAM	7q-Amp	0.344	1
ATM	18q-Del	0.345	1
NEFH	18q-Del	0.345	1
7q-Amp	Del_11q23.1	0.345	1
ENO1	VHL	0.347	1
HSPA2	VHL	0.347	1
KDM5C	Amp_2q32.1	0.347	1
KDM5C	Del_6q26	0.347	1
KDM6A	PBRM1	0.347	1
KRAS	VHL	0.347	1
NFE2L2	PBRM1	0.347	1
PRODH	VHL	0.347	1
SYNE1	Amp_19p13.2	0.347	1
VHL	Xp-Del	0.347	1
3q-Amp	Del_6q26	0.347	1
7q-Amp	9p-Del	0.347	1
Amp_19p13.2	Del_4q34.3	0.347	1
EGFR	7p-Amp	0.348	1
PRKAG2	7p-Amp	0.348	1
SMARCB1	Amp_5q35.1	0.348	1
STAM	7p-Amp	0.348	1
ZNF598	Del_1q43	0.348	1
ZNF598	Del_13q14.2	0.348	1
7p-Amp	Del_1q43	0.348	1
Amp_2q32.1	Del_3p26.3	0.349	1
7q-Amp	Del_16q23.3	0.35	1
ZFYVE26	6p-Del	0.351	1
Del_3p26.3	Del_10q23.31	0.351	1
SETD2	21q-Del	0.352	1
STAG2	20p-Amp	0.352	1
STAG2	20q-Amp	0.352	1
2q-Amp	Del_13q12.13	0.352	1
7p-Amp	Del_11q23.1	0.352	1
3p-Amp	8p-Del	0.354	1
3p-Del	6p-Del	0.354	1
HNRNPM	1q-Del	0.356	1
PIK3CA	1q-Del	0.356	1
PIK3CA	9q-Del	0.356	1
PTEN	SETD2	0.356	1
PTEN	5p-Amp	0.356	1
PTEN	5q-Amp	0.356	1
12q-Amp	Del_16q23.3	0.356	1
2q-Amp	Del_1p36.31	0.356	1
7p-Amp	Del_16q23.3	0.356	1
KDM5C	12q-Amp	0.357	1
SYNE1	12q-Amp	0.357	1
ZFYVE26	1p-Del	0.357	1
KDM6A	Del_13q12.13	0.358	1
NF1	Del_13q12.13	0.358	1
NFE2L2	Del_13q12.13	0.358	1
6q-Del	Del_14q31.1	0.358	1
3p-Del	Del_13q14.2	0.359	1
NF2	3p-Del	0.36	1
GALNT7	Del_1p31.1	0.361	1
SMARCB1	Del_1p31.1	0.361	1
Amp_Xp11.4	Del_1p31.1	0.361	1
STAG2	VHL	0.362	1
ZFYVE26	Del_8p23.2	0.362	1
ATM	18p-Del	0.363	1
HNRNPM	9p-Del	0.363	1
KDM5C	3p-Amp	0.363	1
NEFH	18p-Del	0.363	1
PIK3CA	12p-Amp	0.363	1
PIK3CA	9p-Del	0.363	1
20p-Amp	Del_1q43	0.363	1
20q-Amp	Del_1q43	0.363	1
NF1	17p-Amp	0.364	1
17p-Amp	Del_19p13.3	0.364	1
Amp_Xp22.2	Del_6q26	0.364	1
MTOR	Del_11q23.1	0.365	1
12p-Amp	9p-Del	0.366	1
16p-Amp	1p-Del	0.367	1
Amp_17q25.2	Del_9p23	0.367	1
ADCY8	16p-Amp	0.368	1
PTCH1	Del_3p14.1	0.368	1
ZFYVE26	10q-Del	0.368	1
12q-Amp	Del_8p23.2	0.369	1
14q-Del	6p-Del	0.369	1
CDKN2A	Del_3p14.1	0.37	1
EDIL3	Del_3p14.1	0.37	1
GALNT7	14q-Del	0.37	1
HNRNPM	13q-Del	0.37	1
HSPA2	Del_3p14.1	0.37	1
KRAS	Del_3p14.1	0.37	1
NF1	17p-Del	0.37	1
NFE2L2	17p-Del	0.37	1
PRODH	Del_3p14.1	0.37	1
RAI1	14q-Del	0.37	1
2q-Amp	17p-Del	0.37	1
7p-Amp	Del_9p23	0.37	1
Xp-Del	Del_3p14.1	0.37	1
Amp_3q26.32	Del_11q21	0.37	1
MUC5B	14q-Del	0.371	1
PTEN	Amp_17q25.2	0.371	1
9p-Del	Amp_5q35.1	0.371	1
Amp_2q32.1	Del_3p12.2	0.371	1
STAG2	Del_1p36.31	0.372	1
CSK	Del_3p12.2	0.373	1
EMG1	Del_3p12.2	0.373	1
PBRM1	PTEN	0.374	1
ZNF598	5p-Amp	0.374	1
ZNF598	5q-Amp	0.374	1
20p-Amp	Del_10q23.31	0.374	1
20q-Amp	Del_10q23.31	0.374	1
SETD2	Amp_3q26.32	0.375	1
NFE2L2	8p-Del	0.377	1
SMARCA4	Del_1p31.1	0.377	1
HNRNPM	21q-Del	0.378	1
PIK3CA	21q-Del	0.378	1
ZNF814	Del_6q26	0.378	1
21q-Del	Del_14q31.1	0.378	1
KDM5C	2q-Amp	0.379	1
PIK3CA	Amp_7q31.2	0.379	1
SETD2	Amp_2q32.1	0.379	1
SETD2	Amp_19p13.2	0.379	1
ZFYVE26	Del_2q37.3	0.379	1
2q-Amp	8p-Del	0.379	1
ADCY8	Del_3p12.2	0.382	1
ZFYVE26	Del_3p12.2	0.382	1
5p-Amp	Del_10q23.31	0.382	1
5q-Amp	Del_10q23.31	0.382	1
KDM6A	Del_1q43	0.383	1
KDM6A	Del_13q14.2	0.383	1
MTOR	Del_13q12.13	0.383	1
NF1	Del_1q43	0.383	1
NF1	Del_13q14.2	0.383	1
NFE2L2	Del_13q14.2	0.383	1
16p-Amp	Del_8p23.2	0.383	1
Amp_Xp22.2	Del_6q22.31	0.384	1
PIK3CA	12q-Amp	0.385	1
EGFR	Del_1p36.31	0.388	1
PTEN	9p-Del	0.388	1
ZNF598	1q-Del	0.388	1
PTEN	Amp_2q32.1	0.389	1
2q-Amp	Del_13q14.2	0.389	1
CSK	PBRM1	0.39	1
PBRM1	STXBP3	0.39	1
3q-Amp	Del_6q22.31	0.39	1
1p-Del	Del_3p12.2	0.39	1
EGFR	Del_14q31.1	0.392	1
SETD2	8p-Del	0.392	1
STAM	Del_14q31.1	0.392	1
3q-Amp	6p-Del	0.393	1
FGFR3	Del_3p21.2	0.396	1
PIK3CA	7q-Amp	0.396	1
SLC6A14	Del_3p21.2	0.396	1
ZFYVE26	Del_13q12.13	0.397	1
7q-Amp	Del_8p23.2	0.397	1
PTCH1	6q-Del	0.398	1
6q-Del	Amp_Xp11.4	0.398	1
3q-Amp	Del_1p36.31	0.399	1
1q-Del	Amp_19p13.2	0.4	1
9q-Del	Amp_2q32.1	0.4	1
9q-Del	Amp_19p13.2	0.4	1
ADAM28	Del_3p21.2	0.401	1
C9orf171	Del_3p21.2	0.401	1
CDKN2A	3p-Del	0.401	1
CXorf23	Del_3p21.2	0.401	1
EDIL3	3p-Del	0.401	1
HSPA2	3p-Del	0.401	1
KRAS	3p-Del	0.401	1
NTRK3	Amp_7q31.2	0.401	1
NUDT11	Amp_7q31.2	0.401	1
PHF10	Del_3p21.2	0.401	1
PIK3CA	7p-Amp	0.401	1
PRODH	3p-Del	0.401	1
SCYL1	Del_3p21.2	0.401	1
SLC14A1	Del_3p21.2	0.401	1
SLC1A7	Del_3p21.2	0.401	1
16p-Amp	Del_9p23	0.401	1
5q-Amp	Del_6q22.31	0.401	1
3p-Del	Xp-Del	0.401	1
9q-Del	Amp_3q26.32	0.401	1
PBRM1	9q-Del	0.402	1
TP53	Amp_3q26.32	0.402	1
ADCY8	Del_9p21.3	0.403	1
KDM5C	17q-Amp	0.403	1
SYNE1	Del_3p12.2	0.403	1
ZNF598	13q-Del	0.403	1
17q-Amp	Del_4q34.3	0.403	1
3p-Amp	5p-Amp	0.403	1
3p-Amp	5q-Amp	0.403	1
MET	MUC5B	0.404	1
EGFR	Amp_5q35.1	0.405	1
FAM18B2	Del_1p36.31	0.405	1
PRKAG2	Amp_5q35.1	0.405	1
CSGALNACT2	Del_8p23.2	0.406	1
2q-Amp	Del_3p21.2	0.407	1
PBRM1	ZFYVE26	0.408	1
ZNF814	Del_6q22.31	0.408	1
3q-Amp	Del_14q31.1	0.408	1
5p-Amp	Del_1q43	0.408	1
5q-Amp	Del_1q43	0.408	1
KDM6A	SETD2	0.409	1
PIK3CA	20p-Amp	0.409	1
PIK3CA	20q-Amp	0.409	1
ZFYVE26	17p-Del	0.409	1
12p-Amp	Del_1p31.1	0.409	1
5p-Amp	Del_19p13.3	0.409	1
5q-Amp	Del_19p13.3	0.409	1
ZNF598	21q-Del	0.41	1
DPCR1	16p-Amp	0.411	1
NTRK3	7q-Amp	0.412	1
NUDT11	7q-Amp	0.412	1
KDM5C	Del_8p23.2	0.413	1
MET	Del_8p23.2	0.413	1
STAG2	18p-Del	0.413	1
Del_3p26.3	Del_11q21	0.413	1
ATM	FAM18B2	0.414	1
GALNT7	3p-Del	0.414	1
NEFH	TP53	0.414	1
PTCH1	3p-Del	0.414	1
PTEN	Del_3p14.1	0.414	1
12p-Amp	Del_9p21.3	0.414	1
20p-Amp	1p-Del	0.414	1
20q-Amp	1p-Del	0.414	1
5p-Amp	Del_1p36.31	0.414	1
5q-Amp	Del_1p36.31	0.414	1
9p-Del	Amp_3q26.32	0.414	1
ADCY8	16q-Amp	0.415	1
FAM18B2	SETD2	0.415	1
NTRK3	7p-Amp	0.415	1
NUDT11	7p-Amp	0.415	1
SYNE1	Del_11q23.1	0.415	1
ZFYVE26	8p-Del	0.415	1
3q-Amp	Del_11q23.1	0.415	1
EGFR	Del_1p31.1	0.418	1
Amp_Xp22.2	Del_1p31.1	0.418	1
ADAM28	Del_3p26.3	0.42	1
C9orf171	Del_3p26.3	0.42	1
CXorf23	Del_3p26.3	0.42	1
PHF10	Del_3p26.3	0.42	1
SCYL1	Del_3p26.3	0.42	1
SETD2	20p-Amp	0.42	1
SETD2	20q-Amp	0.42	1
SLC14A1	Del_3p26.3	0.42	1
SLC1A7	Del_3p26.3	0.42	1
SPATA13	Del_3p26.3	0.42	1
MET	10q-Del	0.422	1
PTEN	2q-Amp	0.422	1
ZFYVE26	Del_1q43	0.422	1
ZFYVE26	Del_13q14.2	0.422	1
KDM6A	1q-Del	0.423	1
MET	Del_3p12.2	0.423	1
NF1	1q-Del	0.423	1
NFE2L2	1q-Del	0.423	1
HNRNPM	Del_6q26	0.424	1
7p-Amp	Del_9p21.3	0.424	1
FGFR3	Del_3p26.3	0.425	1
GPR50	Del_3p26.3	0.425	1
MTOR	Del_11q21	0.425	1
NEFH	3q-Del	0.425	1
SETD2	1p-Del	0.425	1
SLC6A14	Del_3p26.3	0.425	1
TDG	Del_3p26.3	0.425	1
16p-Amp	14q-Del	0.425	1
17q-Amp	5q-Amp	0.425	1
KDELR3	VHL	0.426	1
PRKAG2	VHL	0.426	1
VHL	Amp_Xp22.2	0.426	1
5q-Amp	Amp_17q25.2	0.426	1
EGFR	14q-Del	0.427	1
STAM	14q-Del	0.427	1
ADCY8	Del_9p23	0.428	1
SETD2	2q-Amp	0.428	1
2q-Amp	14q-Del	0.428	1
KDM6A	12p-Amp	0.43	1
PBRM1	9p-Del	0.43	1
CYP4F11	Del_6q26	0.431	1
NUDT11	Del_6q26	0.431	1
PLXDC2	Del_6q26	0.431	1
TDG	Del_6q26	0.431	1
KDM6A	Del_3p14.1	0.432	1
NFE2L2	Del_3p14.1	0.432	1
21q-Del	Amp_19p13.2	0.432	1
NEFH	Del_3p21.2	0.433	1
16p-Amp	Del_1p36.31	0.436	1
KDM6A	13q-Del	0.438	1
NF1	13q-Del	0.438	1
NFE2L2	13q-Del	0.438	1
MET	Del_2q37.3	0.439	1
ZNF814	Amp_5q35.1	0.439	1
Amp_5q35.1	Del_16q23.3	0.439	1
20p-Amp	10q-Del	0.441	1
20q-Amp	10q-Del	0.441	1
Amp_7q31.2	Del_11q21	0.441	1
PTCH1	6p-Del	0.444	1
6p-Del	Amp_Xp11.4	0.444	1
EGFR	Amp_17q25.2	0.445	1
KDELR3	Amp_17q25.2	0.445	1
KDM6A	21q-Del	0.445	1
NFE2L2	21q-Del	0.445	1
STAM	Amp_17q25.2	0.445	1
20p-Amp	18p-Del	0.445	1
20q-Amp	18p-Del	0.445	1
3q-Amp	Del_2q37.3	0.445	1
TP53	Amp_5q35.1	0.446	1
ATM	MTOR	0.447	1
MTOR	NEFH	0.447	1
MUC5B	NEFH	0.447	1
ADCY8	SETD2	0.448	1
ZFYVE26	5p-Amp	0.448	1
ZFYVE26	5q-Amp	0.448	1
FAM18B2	3q-Del	0.449	1
GALNT7	17q-Amp	0.449	1
GALNT7	1p-Del	0.449	1
PTCH1	1p-Del	0.449	1
SMARCB1	1p-Del	0.449	1
2q-Amp	9q-Del	0.449	1
1p-Del	Amp_Xp11.4	0.449	1
CSGALNACT2	Del_3p12.2	0.45	1
CYP4F11	Del_6q22.31	0.45	1
DPCR1	Del_3p12.2	0.45	1
NUDT11	Del_6q22.31	0.45	1
PBRM1	SYNE1	0.45	1
PLXDC2	Del_6q22.31	0.45	1
TDG	Del_6q22.31	0.45	1
HNRNPM	18q-Del	0.451	1
20p-Amp	1q-Del	0.451	1
20q-Amp	1q-Del	0.451	1
KDM6A	12q-Amp	0.452	1
MTOR	Amp_3q26.32	0.452	1
NF1	12q-Amp	0.452	1
HNRNPM	Del_6q22.31	0.453	1
MET	3q-Amp	0.453	1
Del_6q22.31	Del_14q31.1	0.453	1
GALNT7	Del_8p23.2	0.454	1
SMARCB1	Del_8p23.2	0.454	1
6q-Del	Amp_Xp22.2	0.454	1
FGFR3	Del_1p36.31	0.455	1
NTRK3	Del_1p36.31	0.455	1
NUDT11	Del_1p36.31	0.455	1
PLXDC2	Del_1p36.31	0.455	1
TDG	Del_1p36.31	0.455	1
ZNF521	Del_1p36.31	0.455	1
MET	Del_6q26	0.456	1
5p-Amp	10q-Del	0.456	1
5q-Amp	10q-Del	0.456	1
Amp_5q35.1	Del_11q23.1	0.456	1
CSGALNACT2	8p-Del	0.458	1
DPCR1	16q-Amp	0.458	1
FGFR3	Del_14q31.1	0.459	1
GPR50	Del_14q31.1	0.459	1
NTRK3	Del_14q31.1	0.459	1
NUDT11	Del_14q31.1	0.459	1
PLXDC2	Del_14q31.1	0.459	1
PTEN	Del_3p26.3	0.459	1
RIMBP3	Del_14q31.1	0.459	1
SLC6A14	Del_14q31.1	0.459	1
TDG	Del_14q31.1	0.459	1
ZNF521	Del_14q31.1	0.459	1
HNRNPM	Del_1p36.31	0.46	1
KDELR3	Del_3p14.1	0.46	1
PIK3CA	Del_1p36.31	0.46	1
PTCH1	16p-Amp	0.46	1
20p-Amp	Del_1p36.31	0.46	1
20q-Amp	Del_1p36.31	0.46	1
Amp_Xp22.2	Del_3p14.1	0.46	1
ADCY8	9q-Del	0.462	1
ZFYVE26	1q-Del	0.462	1
7q-Amp	Del_11q21	0.462	1
2q-Amp	3p-Del	0.463	1
9p-Del	Amp_7q31.2	0.463	1
Del_2q37.3	Del_3p14.1	0.463	1
KDM5C	Del_1p31.1	0.464	1
MET	Del_13q12.13	0.465	1
2q-Amp	Del_3p26.3	0.466	1
FAM18B2	1p-Del	0.468	1
ADCY8	12p-Amp	0.469	1
ADCY8	9p-Del	0.469	1
HNRNPM	18p-Del	0.469	1
7p-Amp	Del_11q21	0.469	1
Amp_3q26.32	Del_16q23.3	0.469	1
FGFR3	Amp_5q35.1	0.471	1
MUC5B	SMARCA4	0.471	1
NTRK3	Amp_5q35.1	0.471	1
PLXDC2	Amp_5q35.1	0.471	1
PTCH1	Del_2q37.3	0.471	1
RIMBP3	Amp_5q35.1	0.471	1
Amp_2q32.1	Del_11q23.1	0.471	1
NEFH	1p-Del	0.472	1
STAG2	3q-Del	0.473	1
MET	Del_9p21.3	0.474	1
SYNE1	Del_11q21	0.474	1
12p-Amp	3q-Del	0.474	1
3q-Amp	Del_11q21	0.474	1
KDM6A	20p-Amp	0.475	1
KDM6A	20q-Amp	0.475	1
ZFYVE26	13q-Del	0.476	1
CDKN2A	Del_3p12.2	0.477	1
EDIL3	Del_3p12.2	0.477	1
HSPA2	Del_3p12.2	0.477	1
KRAS	Del_3p12.2	0.477	1
MYF6	Del_3p12.2	0.477	1
PRODH	Del_3p12.2	0.477	1
VHL	9p-Del	0.477	1
Xp-Del	Del_3p12.2	0.477	1
MUC5B	SETD2	0.478	1
ZNF814	Del_3p14.1	0.478	1
Del_3p14.1	Del_16q23.3	0.478	1
NEFH	Del_8p23.2	0.48	1
14q-Del	21q-Del	0.48	1
CSK	Amp_7q31.2	0.481	1
FAM18B2	21q-Del	0.481	1
ZNF532	Amp_7q31.2	0.481	1
MTOR	TP53	0.483	1
NF1	Amp_7q31.2	0.483	1
ZFYVE26	21q-Del	0.483	1
3q-Amp	14q-Del	0.483	1
Amp_19p13.2	Del_10q23.31	0.483	1
FGFR3	Del_1p31.1	0.484	1
NTRK3	Del_1p31.1	0.484	1
NUDT11	Del_1p31.1	0.484	1
PLXDC2	Del_1p31.1	0.484	1
PTEN	17q-Amp	0.484	1
TDG	Del_1p31.1	0.484	1
ZNF521	Del_1p31.1	0.484	1
3p-Amp	Del_11q23.1	0.487	1
ATM	16p-Amp	0.488	1
GALNT7	Del_13q12.13	0.488	1
PTCH1	Del_13q12.13	0.488	1
SMARCB1	Del_13q12.13	0.488	1
13q-Del	3q-Del	0.488	1
14q-Del	6q-Del	0.488	1
EGFR	Del_10q23.31	0.489	1
KDM5C	17p-Amp	0.489	1
KDM5C	Del_9p21.3	0.489	1
NFE2L2	3p-Del	0.489	1
PRKAG2	Del_10q23.31	0.489	1
3p-Del	Del_19p13.3	0.489	1
ADCY8	12q-Amp	0.49	1
CSGALNACT2	SETD2	0.49	1
DPCR1	SETD2	0.49	1
DPCR1	5p-Amp	0.49	1
DPCR1	5q-Amp	0.49	1
9p-Del	Amp_17q25.2	0.49	1
SETD2	VHL	0.491	1
5p-Amp	Del_6q26	0.491	1
CSK	7q-Amp	0.492	1
FGFR3	14q-Del	0.492	1
GPR50	14q-Del	0.492	1
MET	Del_6q22.31	0.492	1
NTRK3	14q-Del	0.492	1
NUDT11	14q-Del	0.492	1
PLXDC2	14q-Del	0.492	1
RIMBP3	14q-Del	0.492	1
SLC6A14	14q-Del	0.492	1
TDG	14q-Del	0.492	1
TP53	Del_3p12.2	0.492	1
ZNF521	14q-Del	0.492	1
ZNF532	7q-Amp	0.492	1
ADAM28	VHL	0.494	1
C9orf171	VHL	0.494	1
CDKN2A	PBRM1	0.494	1
CXorf23	VHL	0.494	1
ENO1	PBRM1	0.494	1
GALNT7	17p-Amp	0.494	1
INPP5E	VHL	0.494	1
KIF16B	VHL	0.494	1
KRAS	PBRM1	0.494	1
PHF10	VHL	0.494	1
PIK3CA	Del_3p12.2	0.494	1
RAI1	Del_3p21.2	0.494	1
SCYL1	VHL	0.494	1
SLC14A1	VHL	0.494	1
SLC1A7	VHL	0.494	1
SMARCB1	Del_3p21.2	0.494	1
SPATA13	VHL	0.494	1
VCL	VHL	0.494	1
16p-Amp	9q-Del	0.494	1
Amp_Xp11.4	Del_3p21.2	0.494	1
MUC5B	STAG2	0.495	1
ATM	KDM5C	0.496	1
CSK	7p-Amp	0.496	1
KDM5C	NEFH	0.496	1
KDM5C	NF2	0.496	1
NEFH	Del_4q34.3	0.496	1
NF2	3q-Amp	0.496	1
ZNF532	7p-Amp	0.496	1
EGFR	6p-Del	0.499	1
MTOR	3q-Del	0.499	1
NF1	7q-Amp	0.499	1
PRKAG2	6p-Del	0.499	1
SMARCA4	6p-Del	0.499	1
6p-Del	Amp_Xp22.2	0.499	1
GALNT7	17p-Del	0.5	1
PTCH1	17p-Del	0.5	1
SMARCB1	17p-Del	0.5	1
ZNF814	3q-Del	0.5	1
3q-Amp	17p-Del	0.5	1
3q-Del	Del_16q23.3	0.5	1
MET	Del_13q14.2	0.501	1
2q-Amp	Del_11q23.1	0.502	1
21q-Del	3q-Del	0.502	1
HNRNPM	Del_1p31.1	0.503	1
EGFR	17q-Amp	0.504	1
EGFR	1p-Del	0.504	1
KDELR3	17q-Amp	0.504	1
NEFH	Del_2q37.3	0.504	1
NF2	Del_2q37.3	0.504	1
PRKAG2	17q-Amp	0.504	1
PRKAG2	1p-Del	0.504	1
PTEN	16p-Amp	0.504	1
STAM	17q-Amp	0.504	1
VHL	Del_9p23	0.504	1
7q-Amp	Del_9p23	0.504	1
1p-Del	Amp_Xp22.2	0.504	1
KDELR3	3p-Del	0.505	1
NF1	7p-Amp	0.505	1
3p-Del	Amp_Xp22.2	0.505	1
GALNT7	16q-Amp	0.506	1
GALNT7	8p-Del	0.506	1
PTCH1	16q-Amp	0.506	1
SMARCB1	8p-Del	0.506	1
8p-Del	Amp_Xp11.4	0.506	1
MET	Del_14q31.1	0.507	1
SMARCA4	1p-Del	0.507	1
5q-Amp	9q-Del	0.508	1
KDELR3	Del_8p23.2	0.509	1
MET	Amp_2q32.1	0.509	1
PRKAG2	Del_8p23.2	0.509	1
SMARCA4	Del_3p21.2	0.509	1
Del_3p26.3	Del_19p13.3	0.509	1
ARAP3	Del_6q26	0.51	1
CYP4F11	Amp_17q25.2	0.51	1
FAM160B2	Del_6q26	0.51	1
MET	Del_9p23	0.51	1
NTRK3	Amp_17q25.2	0.51	1
RIMBP3	Amp_17q25.2	0.51	1
Amp_Xq11.2	Del_6q26	0.51	1
KDM5C	8p-Del	0.511	1
SYNE1	16q-Amp	0.511	1
16q-Amp	Del_4q34.3	0.511	1
ADCY8	20p-Amp	0.512	1
ADCY8	20q-Amp	0.512	1
GALNT7	Del_1q43	0.512	1
GALNT7	Del_13q14.2	0.512	1
PTCH1	Del_13q14.2	0.512	1
SMARCB1	Del_1q43	0.512	1
SMARCB1	Del_13q14.2	0.512	1
ZFYVE26	Del_3p14.1	0.512	1
ZNF814	6q-Del	0.512	1
Amp_Xp11.4	Del_1q43	0.512	1
ATM	Del_3p14.1	0.514	1
EGFR	16p-Amp	0.514	1
EGFR	10q-Del	0.514	1
KDM5C	7q-Amp	0.514	1
NEFH	Del_3p14.1	0.514	1
NF2	Del_3p14.1	0.514	1
PRKAG2	16p-Amp	0.514	1
PRKAG2	10q-Del	0.514	1
STAM	16p-Amp	0.514	1
16p-Amp	9p-Del	0.514	1
ADAM28	Del_3p14.1	0.515	1
C9orf171	Del_3p14.1	0.515	1
CXorf23	Del_3p14.1	0.515	1
PHF10	Del_3p14.1	0.515	1
SCYL1	Del_3p14.1	0.515	1
SLC14A1	Del_3p14.1	0.515	1
SLC1A7	Del_3p14.1	0.515	1
SMARCA4	Del_8p23.2	0.515	1
SPATA13	Del_3p14.1	0.515	1
12q-Amp	3q-Del	0.515	1
FAM18B2	HNRNPM	0.517	1
HNRNPM	TP53	0.517	1
PIK3CA	TP53	0.517	1
CYP4F11	6q-Del	0.518	1
NUDT11	6q-Del	0.518	1
PLXDC2	6q-Del	0.518	1
TDG	6q-Del	0.518	1
17q-Amp	18q-Del	0.52	1
MTOR	ZNF814	0.521	1
MTOR	Del_16q23.3	0.521	1
Amp_2q32.1	Del_8p23.2	0.522	1
Amp_19p13.2	Del_8p23.2	0.522	1
KDM5C	7p-Amp	0.523	1
7p-Amp	Del_4q34.3	0.523	1
Del_1q43	Del_4q34.3	0.523	1
DPCR1	21q-Del	0.524	1
MET	3p-Amp	0.524	1
ATM	Del_3p12.2	0.525	1
PRKAG2	Del_2q37.3	0.525	1
SETD2	12p-Amp	0.525	1
Amp_Xp22.2	Del_2q37.3	0.525	1
PTEN	Del_3p12.2	0.526	1
HNRNPM	3q-Del	0.527	1
KDM6A	Del_6q26	0.527	1
NFE2L2	Del_6q26	0.527	1
PTCH1	Del_3p12.2	0.527	1
SMARCB1	Del_3p12.2	0.527	1
ARAP3	Del_6q22.31	0.529	1
FAM160B2	Del_6q22.31	0.529	1
SMARCB1	Del_3p26.3	0.529	1
Amp_2q32.1	Del_11q21	0.529	1
Amp_19p13.2	Del_1p36.31	0.529	1
Amp_Xp11.4	Del_3p26.3	0.529	1
Amp_Xq11.2	Del_6q22.31	0.529	1
ARAP3	Del_1p36.31	0.532	1
FAM160B2	Del_1p36.31	0.532	1
STXBP3	Del_1p36.31	0.532	1
ZNF532	Del_1p36.31	0.532	1
ARHGAP33	Del_3p21.2	0.533	1
EMG1	Del_3p21.2	0.533	1
FAM160B2	Del_3p21.2	0.533	1
ZNF532	Del_3p21.2	0.533	1
FGFR3	VHL	0.534	1
NTRK3	VHL	0.534	1
TDG	VHL	0.534	1
ATM	PTEN	0.535	1
KDM5C	Del_9p23	0.535	1
NEFH	PTEN	0.535	1
NF2	PTEN	0.535	1
PIK3CA	Del_3p21.2	0.535	1
ARAP3	Del_14q31.1	0.536	1
ARHGAP33	Del_14q31.1	0.536	1
CSK	Del_14q31.1	0.536	1
GALNT7	SETD2	0.536	1
RAI1	5q-Amp	0.536	1
STXBP3	Del_14q31.1	0.536	1
ZNF532	Del_14q31.1	0.536	1
NEFH	Del_9p21.3	0.538	1
Amp_19p13.2	Del_14q31.1	0.538	1
MET	SETD2	0.539	1
MET	2q-Amp	0.539	1
MET	5p-Amp	0.539	1
MET	5q-Amp	0.539	1
ATM	Del_6q26	0.54	1
NF2	Del_6q26	0.54	1
EGFR	Del_13q12.13	0.541	1
Del_3p21.2	Del_10q23.31	0.541	1
ADCY8	Amp_7q31.2	0.542	1
HNRNPM	Amp_17q25.2	0.542	1
KDM5C	STAG2	0.542	1
PIK3CA	Amp_17q25.2	0.542	1
STAG2	3q-Amp	0.542	1
ZNF814	3p-Del	0.543	1
3p-Amp	Del_11q21	0.543	1
3q-Amp	6q-Del	0.543	1
3p-Del	Del_16q23.3	0.543	1
ADAM28	3p-Del	0.544	1
C9orf171	3p-Del	0.544	1
CXorf23	3p-Del	0.544	1
IMPA2	3p-Del	0.544	1
OR10G3	3p-Del	0.544	1
PHF10	3p-Del	0.544	1
SCYL1	3p-Del	0.544	1
SLC14A1	3p-Del	0.544	1
SLC1A7	3p-Del	0.544	1
SPATA13	3p-Del	0.544	1
2q-Amp	Del_10q23.31	0.544	1
STAG2	17q-Amp	0.545	1
STAG2	1p-Del	0.545	1
EGFR	17p-Amp	0.546	1
EGFR	Del_9p21.3	0.546	1
KDELR3	17p-Amp	0.546	1
PRKAG2	17p-Amp	0.546	1
STAM	17p-Amp	0.546	1
TP53	ZNF598	0.547	1
20p-Amp	Del_1p31.1	0.547	1
20q-Amp	Del_1p31.1	0.547	1
7p-Amp	Del_8p23.2	0.547	1
Del_1p31.1	Del_3p14.1	0.547	1
CSK	Amp_5q35.1	0.548	1
EMG1	Amp_5q35.1	0.548	1
FAM160B2	Amp_5q35.1	0.548	1
MTOR	PIK3CA	0.548	1
MUC5B	PIK3CA	0.548	1
ZNF532	Amp_5q35.1	0.548	1
ATM	Amp_2q32.1	0.549	1
ATM	Amp_19p13.2	0.549	1
GALNT7	1q-Del	0.549	1
GALNT7	9q-Del	0.549	1
NF2	Amp_2q32.1	0.549	1
NF2	Amp_19p13.2	0.549	1
PTCH1	1q-Del	0.549	1
SMARCB1	1q-Del	0.549	1
1q-Del	Amp_Xp11.4	0.549	1
ADCY8	18q-Del	0.551	1
CYP4F11	Del_10q23.31	0.551	1
FGFR3	Del_10q23.31	0.551	1
GALNT7	PBRM1	0.551	1
NUDT11	Del_10q23.31	0.551	1
PBRM1	RAI1	0.551	1
PBRM1	SMARCB1	0.551	1
PLXDC2	Del_10q23.31	0.551	1
SETD2	Del_9p21.3	0.551	1
TDG	Del_10q23.31	0.551	1
ZFYVE26	18q-Del	0.551	1
ZNF521	Del_10q23.31	0.551	1
ZNF598	Del_1p31.1	0.551	1
CSGALNACT2	20p-Amp	0.552	1
CSGALNACT2	20q-Amp	0.552	1
EGFR	17p-Del	0.552	1
PRKAG2	17p-Del	0.552	1
MTOR	Del_8p23.2	0.553	1
12q-Amp	Del_1p36.31	0.554	1
5q-Amp	18p-Del	0.554	1
7q-Amp	Del_9p21.3	0.554	1
ATM	16q-Amp	0.555	1
FAM18B2	Del_4q34.3	0.555	1
HNRNPM	6q-Del	0.555	1
KDM6A	Del_6q22.31	0.555	1
NF2	8p-Del	0.555	1
NFE2L2	Del_6q22.31	0.555	1
RAI1	12p-Amp	0.555	1
TP53	3q-Amp	0.555	1
12p-Amp	Amp_Xp11.4	0.555	1
10q-Del	3p-Del	0.555	1
ADCY8	7q-Amp	0.557	1
20p-Amp	8p-Del	0.557	1
20q-Amp	8p-Del	0.557	1
EGFR	16q-Amp	0.558	1
KDELR3	8p-Del	0.558	1
MET	9q-Del	0.558	1
PRKAG2	16q-Amp	0.558	1
PRKAG2	8p-Del	0.558	1
STAM	16q-Amp	0.558	1
2q-Amp	Del_11q21	0.558	1
5p-Amp	Del_6q22.31	0.558	1
8p-Del	Amp_Xp22.2	0.558	1
ARAP3	Del_1p31.1	0.559	1
FAM160B2	Del_1p31.1	0.559	1
STXBP3	Del_1p31.1	0.559	1
ZNF532	Del_1p31.1	0.559	1
Amp_Xq11.2	Del_1p31.1	0.559	1
ARHGAP33	Del_3p26.3	0.56	1
CYP4F11	6p-Del	0.56	1
EMG1	Del_3p26.3	0.56	1
FAM160B2	Del_3p26.3	0.56	1
KDM6A	Del_1p36.31	0.56	1
NUDT11	6p-Del	0.56	1
PLXDC2	6p-Del	0.56	1
SMARCA4	Del_3p26.3	0.56	1
TDG	6p-Del	0.56	1
ZNF521	6p-Del	0.56	1
ZNF532	Del_3p26.3	0.56	1
ATM	PBRM1	0.561	1
GALNT7	13q-Del	0.561	1
PTCH1	13q-Del	0.561	1
SMARCB1	13q-Del	0.561	1
Del_3p14.1	Del_13q12.13	0.561	1
ADCY8	7p-Amp	0.562	1
EGFR	Del_1q43	0.563	1
EGFR	Del_13q14.2	0.563	1
NF2	3p-Amp	0.563	1
PRKAG2	Del_1q43	0.563	1
Amp_Xp22.2	Del_1q43	0.563	1
NEFH	Del_1q43	0.564	1
VHL	9q-Del	0.564	1
CYP4F11	17q-Amp	0.565	1
CYP4F11	1p-Del	0.565	1
FGFR3	1p-Del	0.565	1
NTRK3	17q-Amp	0.565	1
NTRK3	1p-Del	0.565	1
NUDT11	1p-Del	0.565	1
PLXDC2	1p-Del	0.565	1
RIMBP3	17q-Amp	0.565	1
RIMBP3	1p-Del	0.565	1
TDG	1p-Del	0.565	1
ZNF521	1p-Del	0.565	1
17q-Amp	18p-Del	0.565	1
FGFR3	Del_3p14.1	0.566	1
NF1	Del_14q31.1	0.566	1
PLXDC2	Del_3p14.1	0.566	1
RIMBP3	Del_3p14.1	0.566	1
SYNE1	ZNF814	0.566	1
ZNF814	Del_4q34.3	0.566	1
ADCY8	3p-Del	0.567	1
ARAP3	14q-Del	0.567	1
ARHGAP33	14q-Del	0.567	1
CSK	14q-Del	0.567	1
PTEN	17p-Amp	0.567	1
STXBP3	14q-Del	0.567	1
ZFYVE26	3p-Del	0.567	1
ZNF532	14q-Del	0.567	1
5p-Amp	17p-Del	0.567	1
5q-Amp	17p-Del	0.567	1
ADCY8	18p-Del	0.568	1
MET	9p-Del	0.568	1
PTCH1	21q-Del	0.568	1
RAI1	21q-Del	0.568	1
ZFYVE26	18p-Del	0.568	1
21q-Del	Amp_Xp11.4	0.568	1
EGFR	Del_9p23	0.569	1
MET	14q-Del	0.569	1
FGFR3	Del_8p23.2	0.57	1
KDM5C	5q-Amp	0.57	1
KDM5C	3q-Del	0.57	1
NTRK3	Del_8p23.2	0.57	1
NUDT11	Del_8p23.2	0.57	1
SYNE1	5p-Amp	0.57	1
SYNE1	5q-Amp	0.57	1
TDG	Del_8p23.2	0.57	1
ZNF521	Del_8p23.2	0.57	1
2q-Amp	Del_3p14.1	0.57	1
3q-Amp	5q-Amp	0.57	1
Amp_5q35.1	Del_11q21	0.57	1
SMARCA4	Del_9p21.3	0.572	1
NEFH	Del_9p23	0.573	1
NF2	Del_9p23	0.573	1
Amp_3q26.32	Del_9p23	0.574	1
ATM	Del_6q22.31	0.575	1
CYP4F11	16p-Amp	0.575	1
CYP4F11	10q-Del	0.575	1
FGFR3	10q-Del	0.575	1
GALNT7	12q-Amp	0.575	1
NF2	Del_6q22.31	0.575	1
NTRK3	16p-Amp	0.575	1
NUDT11	16p-Amp	0.575	1
NUDT11	10q-Del	0.575	1
PLXDC2	10q-Del	0.575	1
RAI1	12q-Amp	0.575	1
RIMBP3	16p-Amp	0.575	1
TDG	10q-Del	0.575	1
ZNF521	10q-Del	0.575	1
12q-Amp	Amp_Xp11.4	0.575	1
MTOR	ZNF598	0.576	1
MUC5B	ZNF598	0.576	1
STAG2	Del_2q37.3	0.576	1
18q-Del	Amp_3q26.32	0.576	1
Del_3p14.1	Del_13q14.2	0.577	1
ATM	2q-Amp	0.578	1
FAM18B2	Del_19p13.3	0.578	1
FZR1	Amp_7q31.2	0.578	1
HSPA2	Amp_7q31.2	0.578	1
KDM6A	TP53	0.578	1
KLK10	Amp_7q31.2	0.578	1
KRAS	Amp_7q31.2	0.578	1
NF2	2q-Amp	0.578	1
SETD2	12q-Amp	0.578	1
PIK3CA	Del_3p26.3	0.579	1
2q-Amp	Del_8p23.2	0.581	1
ATM	Del_1p36.31	0.582	1
ARHGAP33	Amp_17q25.2	0.583	1
CSK	Amp_17q25.2	0.583	1
EMG1	Amp_17q25.2	0.583	1
FAM160B2	Amp_17q25.2	0.583	1
NF1	Amp_5q35.1	0.583	1
NFE2L2	Amp_5q35.1	0.583	1
ZNF532	Amp_17q25.2	0.583	1
SMARCA4	Del_6q26	0.584	1
CYP4F11	Del_2q37.3	0.585	1
GPR50	Del_2q37.3	0.585	1
NUDT11	Del_2q37.3	0.585	1
PLXDC2	Del_2q37.3	0.585	1
PTEN	Amp_3q26.32	0.585	1
TDG	Del_2q37.3	0.585	1
ZNF521	Del_2q37.3	0.585	1
EGFR	SETD2	0.586	1
EGFR	5p-Amp	0.586	1
EGFR	5q-Amp	0.586	1
KDELR3	SETD2	0.586	1
NEFH	3p-Del	0.586	1
PRKAG2	SETD2	0.586	1
PRKAG2	5p-Amp	0.586	1
PRKAG2	5q-Amp	0.586	1
SETD2	STAM	0.586	1
Amp_3q26.32	Amp_5q35.1	0.586	1
KDM6A	3q-Del	0.587	1
3q-Del	Del_19p13.3	0.587	1
FZR1	7q-Amp	0.588	1
HSPA2	7q-Amp	0.588	1
KLK10	7q-Amp	0.588	1
KRAS	7q-Amp	0.588	1
MET	21q-Del	0.588	1
PTEN	16q-Amp	0.588	1
5q-Amp	6p-Del	0.588	1
NEFH	Del_14q31.1	0.589	1
SMARCA4	8p-Del	0.589	1
FZR1	7p-Amp	0.591	1
HSPA2	7p-Amp	0.591	1
KLK10	7p-Amp	0.591	1
KRAS	7p-Amp	0.591	1
2q-Amp	10q-Del	0.591	1
Del_8p23.2	Del_16q23.3	0.591	1
ARAP3	6q-Del	0.592	1
FAM160B2	6q-Del	0.592	1
HNRNPM	KDM5C	0.592	1
HNRNPM	SYNE1	0.592	1
HNRNPM	Del_4q34.3	0.592	1
KDM5C	PIK3CA	0.592	1
PIK3CA	SYNE1	0.592	1
PIK3CA	Del_4q34.3	0.592	1
STAG2	Amp_19p13.2	0.592	1
STXBP3	6q-Del	0.592	1
20p-Amp	6p-Del	0.592	1
20q-Amp	6p-Del	0.592	1
6q-Del	Amp_Xq11.2	0.592	1
ADCY8	Amp_3q26.32	0.593	1
SETD2	Amp_17q25.2	0.593	1
KDM5C	9q-Del	0.594	1
DPCR1	Del_3p14.1	0.598	1
EGFR	1q-Del	0.598	1
EGFR	9q-Del	0.598	1
PRKAG2	1q-Del	0.598	1
16p-Amp	Del_16q23.3	0.598	1
1q-Del	Amp_Xp22.2	0.598	1
FGFR3	Del_13q12.13	0.6	1
GPR50	Del_13q12.13	0.6	1
KDM6A	Del_1p31.1	0.6	1
NEFH	SETD2	0.6	1
NTRK3	Del_13q12.13	0.6	1
NUDT11	Del_13q12.13	0.6	1
PLXDC2	Del_13q12.13	0.6	1
RIMBP3	Del_13q12.13	0.6	1
TDG	Del_13q12.13	0.6	1
ZNF521	Del_13q12.13	0.6	1
KDM5C	MUC5B	0.601	1
PTEN	ZNF814	0.602	1
14q-Del	Del_6q22.31	0.602	1
CDKN2A	Del_6q26	0.604	1
CSGALNACT2	Amp_7q31.2	0.604	1
ECHDC2	Del_6q26	0.604	1
EDIL3	Del_6q26	0.604	1
EGFR	12p-Amp	0.604	1
EGFR	9p-Del	0.604	1
HSPA2	Del_6q26	0.604	1
KRAS	Del_6q26	0.604	1
PRKAG2	12p-Amp	0.604	1
STAM	12p-Amp	0.604	1
12p-Amp	Amp_Xp22.2	0.604	1
CYP4F11	17p-Amp	0.605	1
CYP4F11	Del_9p21.3	0.605	1
NTRK3	17p-Amp	0.605	1
NTRK3	Del_9p21.3	0.605	1
NUDT11	Del_9p21.3	0.605	1
PLXDC2	Del_9p21.3	0.605	1
RIMBP3	17p-Amp	0.605	1
SLC6A14	Del_9p21.3	0.605	1
TDG	Del_9p21.3	0.605	1
KDM5C	9p-Del	0.606	1
KDM6A	MTOR	0.606	1
KDM6A	MUC5B	0.606	1
MTOR	NFE2L2	0.606	1
SMARCA4	Del_9p23	0.606	1
STAG2	3p-Amp	0.606	1
Amp_17q25.2	Del_9p21.3	0.606	1
CYP4F11	3p-Del	0.607	1
FGFR3	3p-Del	0.607	1
NUDT11	3p-Del	0.607	1
SLC6A14	3p-Del	0.607	1
2q-Amp	Del_14q31.1	0.607	1
ATM	Del_11q23.1	0.608	1
NEFH	Del_11q23.1	0.608	1
14q-Del	Amp_19p13.2	0.608	1
Amp_7q31.2	Del_9p23	0.608	1
CYP4F11	17p-Del	0.61	1
EGFR	13q-Del	0.61	1
NEFH	Amp_5q35.1	0.61	1
NTRK3	17p-Del	0.61	1
NUDT11	17p-Del	0.61	1
PLXDC2	17p-Del	0.61	1
TDG	17p-Del	0.61	1
ZNF521	17p-Del	0.61	1
5q-Amp	3p-Del	0.61	1
ADAM28	Del_3p12.2	0.611	1
ADCY8	TP53	0.611	1
C9orf171	Del_3p12.2	0.611	1
CXorf23	Del_3p12.2	0.611	1
EGFR	Del_3p12.2	0.611	1
IMPA2	Del_3p12.2	0.611	1
KDELR3	Del_3p12.2	0.611	1
OR10G3	Del_3p12.2	0.611	1
PHF10	Del_3p12.2	0.611	1
PIK3CA	3p-Del	0.611	1
PRKAG2	Del_3p12.2	0.611	1
SCYL1	Del_3p12.2	0.611	1
SLC14A1	Del_3p12.2	0.611	1
SLC1A7	Del_3p12.2	0.611	1
SPATA13	Del_3p12.2	0.611	1
TP53	ZFYVE26	0.611	1
Amp_Xp22.2	Del_3p12.2	0.611	1
NF1	14q-Del	0.612	1
FAM18B2	PTEN	0.613	1
PBRM1	SMARCA4	0.614	1
ADCY8	Del_1p36.31	0.615	1
CYP4F11	16q-Amp	0.615	1
FGFR3	8p-Del	0.615	1
NTRK3	16q-Amp	0.615	1
NTRK3	8p-Del	0.615	1
NUDT11	16q-Amp	0.615	1
NUDT11	8p-Del	0.615	1
RIMBP3	16q-Amp	0.615	1
TDG	8p-Del	0.615	1
ZFYVE26	Del_1p36.31	0.615	1
ZNF521	8p-Del	0.615	1
Amp_2q32.1	Del_16q23.3	0.615	1
Amp_19p13.2	Del_16q23.3	0.615	1
EGFR	21q-Del	0.616	1
PRKAG2	21q-Del	0.616	1
SETD2	Del_9p23	0.616	1
STAM	21q-Del	0.616	1
21q-Del	Amp_Xp22.2	0.616	1
HNRNPM	6p-Del	0.617	1
MET	6q-Del	0.617	1
PBRM1	5q-Amp	0.617	1
SMARCA4	Del_6q22.31	0.617	1
ATM	1q-Del	0.618	1
KDM5C	ZNF598	0.618	1
NEFH	1q-Del	0.618	1
NEFH	9q-Del	0.618	1
NF2	9q-Del	0.618	1
SYNE1	ZNF598	0.618	1
3q-Amp	13q-Del	0.618	1
CSGALNACT2	7q-Amp	0.619	1
ZFYVE26	3q-Del	0.619	1
CDKN2A	Del_6q22.31	0.62	1
CYP4F11	Del_1q43	0.62	1
ECHDC2	Del_6q22.31	0.62	1
EDIL3	Del_6q22.31	0.62	1
FGFR3	Del_1q43	0.62	1
FGFR3	Del_13q14.2	0.62	1
GPR50	Del_13q14.2	0.62	1
HSPA2	Del_6q22.31	0.62	1
KRAS	Del_6q22.31	0.62	1
NTRK3	Del_1q43	0.62	1
NTRK3	Del_13q14.2	0.62	1
NUDT11	Del_1q43	0.62	1
NUDT11	Del_13q14.2	0.62	1
PLXDC2	Del_1q43	0.62	1
PLXDC2	Del_13q14.2	0.62	1
RIMBP3	Del_13q14.2	0.62	1
TDG	Del_1q43	0.62	1
TDG	Del_13q14.2	0.62	1
ZNF521	Del_1q43	0.62	1
ZNF521	Del_13q14.2	0.62	1
ARAP3	Del_10q23.31	0.621	1
FAM160B2	Del_10q23.31	0.621	1
STXBP3	Del_10q23.31	0.621	1
ZNF532	Del_10q23.31	0.621	1
5q-Amp	6q-Del	0.621	1
EGFR	12q-Amp	0.622	1
KDELR3	12q-Amp	0.622	1
PRKAG2	12q-Amp	0.622	1
STAM	12q-Amp	0.622	1
12q-Amp	Amp_Xp22.2	0.622	1
Amp_7q31.2	Del_8p23.2	0.622	1
CSGALNACT2	7p-Amp	0.623	1
NFE2L2	Del_3p12.2	0.623	1
STAG2	8p-Del	0.623	1
10q-Del	Del_3p14.1	0.623	1
CDKN2A	Del_1p36.31	0.624	1
ECHDC2	Del_1p36.31	0.624	1
EDIL3	Del_1p36.31	0.624	1
FZR1	Del_1p36.31	0.624	1
HNRNPM	17q-Amp	0.624	1
HNRNPM	1p-Del	0.624	1
HSPA2	Del_1p36.31	0.624	1
KLK10	Del_1p36.31	0.624	1
KRAS	Del_1p36.31	0.624	1
PIK3CA	17q-Amp	0.624	1
PRODH	Del_1p36.31	0.624	1
ADAM28	PBRM1	0.625	1
C9orf171	PBRM1	0.625	1
CXorf23	PBRM1	0.625	1
CYP4F11	Del_9p23	0.625	1
IMPA2	PBRM1	0.625	1
INPP5E	PBRM1	0.625	1
KIF16B	PBRM1	0.625	1
NTRK3	Del_9p23	0.625	1
NUDT11	Del_9p23	0.625	1
PBRM1	PHF10	0.625	1
PBRM1	SCYL1	0.625	1
PBRM1	SLC14A1	0.625	1
PBRM1	SLC1A7	0.625	1
PBRM1	SPATA13	0.625	1
PLXDC2	Del_9p23	0.625	1
TDG	Del_9p23	0.625	1
CDKN2A	Del_14q31.1	0.627	1
ECHDC2	Del_14q31.1	0.627	1
EDIL3	Del_14q31.1	0.627	1
ENO1	Del_14q31.1	0.627	1
FZR1	Del_14q31.1	0.627	1
HSPA2	Del_14q31.1	0.627	1
KLK10	Del_14q31.1	0.627	1
KRAS	Del_14q31.1	0.627	1
MYF6	Del_14q31.1	0.627	1
NEFH	9p-Del	0.627	1
NF2	9p-Del	0.627	1
PIK3CA	PTEN	0.627	1
PRODH	Del_14q31.1	0.627	1
SMARCA4	Del_11q23.1	0.627	1
Xp-Del	Del_14q31.1	0.627	1
MTOR	Del_6q26	0.628	1
ARAP3	6p-Del	0.629	1
FAM160B2	6p-Del	0.629	1
STAG2	Del_6q26	0.629	1
STXBP3	6p-Del	0.629	1
ZNF532	6p-Del	0.629	1
6p-Del	Amp_Xq11.2	0.629	1
GALNT7	18q-Del	0.63	1
PTCH1	18q-Del	0.63	1
SMARCB1	18q-Del	0.63	1
ATM	Del_1p31.1	0.631	1
SETD2	SMARCA4	0.631	1
TP53	Amp_2q32.1	0.632	1
CDCA8	Del_3p21.2	0.633	1
F2RL1	Del_3p21.2	0.633	1
FLCN	Del_3p21.2	0.633	1
NKX2-1	Del_3p21.2	0.633	1
PBRM1	STAM	0.633	1
RCN1	Del_3p21.2	0.633	1
RNF113B	Del_3p21.2	0.633	1
ZNHIT1	Del_3p21.2	0.633	1
17q-Amp	Del_11q23.1	0.633	1
ARAP3	1p-Del	0.634	1
ARHGAP33	17q-Amp	0.634	1
CSK	17q-Amp	0.634	1
EMG1	17q-Amp	0.634	1
FAM160B2	17q-Amp	0.634	1
FAM160B2	1p-Del	0.634	1
STXBP3	1p-Del	0.634	1
ZNF532	17q-Amp	0.634	1
ZNF532	1p-Del	0.634	1
1p-Del	Amp_Xq11.2	0.634	1
PBRM1	Del_4q34.3	0.635	1
ATM	13q-Del	0.636	1
ZNF814	Del_13q12.13	0.636	1
FZR1	Amp_5q35.1	0.637	1
HSPA2	Amp_5q35.1	0.637	1
KLK10	Amp_5q35.1	0.637	1
KRAS	Amp_5q35.1	0.637	1
NF2	Del_3p21.2	0.637	1
PRODH	Amp_5q35.1	0.637	1
6p-Del	Del_3p14.1	0.637	1
Xp-Del	Amp_5q35.1	0.637	1
ADCY8	MTOR	0.638	1
ADCY8	MUC5B	0.638	1
ARHGAP33	Del_8p23.2	0.638	1
CSK	Del_8p23.2	0.638	1
FAM160B2	Del_8p23.2	0.638	1
MTOR	ZFYVE26	0.638	1
MUC5B	ZFYVE26	0.638	1
STXBP3	Del_8p23.2	0.638	1
ZNF532	Del_8p23.2	0.638	1
HNRNPM	Amp_19p13.2	0.639	1
PIK3CA	Amp_2q32.1	0.639	1
PIK3CA	Amp_19p13.2	0.639	1
12p-Amp	Del_1p36.31	0.64	1
CYP4F11	SETD2	0.641	1
EGFR	20p-Amp	0.641	1
EGFR	20q-Amp	0.641	1
FGFR3	SETD2	0.641	1
GPR50	SETD2	0.641	1
NUDT11	SETD2	0.641	1
PLXDC2	5p-Amp	0.641	1
PLXDC2	5q-Amp	0.641	1
PRKAG2	20p-Amp	0.641	1
PRKAG2	20q-Amp	0.641	1
RIMBP3	SETD2	0.641	1
RIMBP3	5p-Amp	0.641	1
RIMBP3	5q-Amp	0.641	1
SETD2	SLC6A14	0.641	1
SETD2	ZNF521	0.641	1
SLC6A14	5p-Amp	0.641	1
SLC6A14	5q-Amp	0.641	1
ZNF521	5p-Amp	0.641	1
ZNF521	5q-Amp	0.641	1
2q-Amp	Del_16q23.3	0.641	1
ARAP3	10q-Del	0.642	1
ARHGAP33	16p-Amp	0.642	1
CSK	16p-Amp	0.642	1
EMG1	16p-Amp	0.642	1
FAM160B2	10q-Del	0.642	1
STXBP3	10q-Del	0.642	1
ZNF532	16p-Amp	0.642	1
ZNF532	10q-Del	0.642	1
12q-Amp	Del_4q34.3	0.642	1
ZNF814	Del_9p21.3	0.643	1
17p-Amp	Del_16q23.3	0.643	1
Del_1q43	Del_14q31.1	0.643	1
GALNT7	18p-Del	0.644	1
PTCH1	18p-Del	0.644	1
SMARCB1	18p-Del	0.644	1
CSGALNACT2	FAM18B2	0.645	1
DPCR1	FAM18B2	0.645	1
DPCR1	TP53	0.645	1
NEFH	21q-Del	0.645	1
NF2	21q-Del	0.645	1
SYNE1	17q-Amp	0.645	1
ZNF598	Del_10q23.31	0.645	1
KDM5C	KDM6A	0.646	1
KDM5C	Del_19p13.3	0.646	1
NEFH	14q-Del	0.646	1
NFE2L2	SYNE1	0.646	1
NFE2L2	3q-Amp	0.646	1
NFE2L2	Del_4q34.3	0.646	1
3q-Amp	Del_19p13.3	0.646	1
3q-Del	Amp_2q32.1	0.646	1
3q-Del	Amp_19p13.2	0.646	1
CDKN2A	Del_1p31.1	0.647	1
ECHDC2	Del_1p31.1	0.647	1
EDIL3	Del_1p31.1	0.647	1
FZR1	Del_1p31.1	0.647	1
HSPA2	Del_1p31.1	0.647	1
KDM6A	6q-Del	0.647	1
KLK10	Del_1p31.1	0.647	1
KRAS	Del_1p31.1	0.647	1
PRODH	Del_1p31.1	0.647	1
CDCA8	Del_3p26.3	0.648	1
DPYSL4	Del_3p26.3	0.648	1
F2RL1	Del_3p26.3	0.648	1
FLCN	Del_3p26.3	0.648	1
NKX2-1	Del_3p26.3	0.648	1
RCN1	Del_3p26.3	0.648	1
RNF113B	Del_3p26.3	0.648	1
ZNHIT1	Del_3p26.3	0.648	1
SMARCA4	9q-Del	0.649	1
PBRM1	Del_19p13.3	0.65	1
20p-Amp	18q-Del	0.65	1
20q-Amp	18q-Del	0.65	1
FAM160B2	Del_2q37.3	0.651	1
PIK3CA	3p-Amp	0.651	1
SMARCA4	Amp_5q35.1	0.651	1
SYNE1	Amp_5q35.1	0.651	1
ZNF532	Del_2q37.3	0.651	1
ZNF814	17p-Del	0.651	1
Amp_Xq11.2	Del_2q37.3	0.651	1
ADCY8	Del_1p31.1	0.652	1
CYP4F11	1q-Del	0.652	1
CYP4F11	9q-Del	0.652	1
FGFR3	1q-Del	0.652	1
NTRK3	1q-Del	0.652	1
NTRK3	9q-Del	0.652	1
NUDT11	1q-Del	0.652	1
NUDT11	9q-Del	0.652	1
PLXDC2	1q-Del	0.652	1
PLXDC2	9q-Del	0.652	1
PTEN	ZNF598	0.652	1
RIMBP3	1q-Del	0.652	1
SLC6A14	9q-Del	0.652	1
TDG	1q-Del	0.652	1
TDG	9q-Del	0.652	1
TP53	3p-Amp	0.652	1
ZNF521	1q-Del	0.652	1
CSGALNACT2	3q-Del	0.653	1
DPCR1	3q-Del	0.653	1
CDKN2A	14q-Del	0.654	1
ECHDC2	14q-Del	0.654	1
EDIL3	14q-Del	0.654	1
ENO1	14q-Del	0.654	1
FZR1	14q-Del	0.654	1
HSPA2	14q-Del	0.654	1
KLK10	14q-Del	0.654	1
KRAS	14q-Del	0.654	1
MYF6	14q-Del	0.654	1
PRODH	14q-Del	0.654	1
PTCH1	VHL	0.654	1
SMARCB1	VHL	0.654	1
VHL	Amp_Xp11.4	0.654	1
14q-Del	Xp-Del	0.654	1
ATM	12q-Amp	0.655	1
ATM	Del_11q21	0.655	1
FAM18B2	5p-Amp	0.655	1
FAM18B2	5q-Amp	0.655	1
MTOR	PTEN	0.655	1
NEFH	Del_11q21	0.655	1
SETD2	TP53	0.655	1
16q-Amp	18q-Del	0.655	1
18q-Del	8p-Del	0.655	1
ARAP3	VHL	0.657	1
ARHGAP33	VHL	0.657	1
CYP4F11	9p-Del	0.657	1
EMG1	VHL	0.657	1
FAM160B2	VHL	0.657	1
FGFR3	12p-Amp	0.657	1
NTRK3	9p-Del	0.657	1
NUDT11	12p-Amp	0.657	1
NUDT11	9p-Del	0.657	1
PLXDC2	9p-Del	0.657	1
SLC6A14	12p-Amp	0.657	1
SLC6A14	9p-Del	0.657	1
SMARCA4	9p-Del	0.657	1
TDG	9p-Del	0.657	1
VHL	ZNF532	0.657	1
VHL	Amp_Xq11.2	0.657	1
MTOR	8p-Del	0.658	1
MUC5B	8p-Del	0.658	1
NF1	VHL	0.658	1
ZNF814	8p-Del	0.658	1
16q-Amp	Del_16q23.3	0.658	1
8p-Del	Del_16q23.3	0.658	1
PBRM1	Del_9p23	0.66	1
STAG2	Del_6q22.31	0.661	1
20p-Amp	9q-Del	0.662	1
20q-Amp	9q-Del	0.662	1
FGFR3	13q-Del	0.663	1
GPR50	13q-Del	0.663	1
NTRK3	13q-Del	0.663	1
NUDT11	13q-Del	0.663	1
PLXDC2	13q-Del	0.663	1
TDG	13q-Del	0.663	1
ZNF521	13q-Del	0.663	1
ZNF598	Amp_19p13.2	0.663	1
ARAP3	Del_13q12.13	0.664	1
ARHGAP33	Del_13q12.13	0.664	1
FAM160B2	Del_13q12.13	0.664	1
KDM5C	SYNE1	0.664	1
PTEN	9q-Del	0.664	1
STXBP3	Del_13q12.13	0.664	1
ZNF532	Del_13q12.13	0.664	1
3q-Amp	Del_4q34.3	0.664	1
Amp_Xq11.2	Del_13q12.13	0.664	1
GALNT7	Amp_3q26.32	0.666	1
PTCH1	Amp_3q26.32	0.666	1
SYNE1	16p-Amp	0.666	1
ZNF814	Del_1q43	0.666	1
ZNF814	Del_13q14.2	0.666	1
16p-Amp	Del_4q34.3	0.666	1
PBRM1	STAG2	0.667	1
CYP4F11	21q-Del	0.668	1
ECHDC2	Amp_17q25.2	0.668	1
EDIL3	Amp_17q25.2	0.668	1
ENO1	Amp_17q25.2	0.668	1
FGFR3	21q-Del	0.668	1
FZR1	Amp_17q25.2	0.668	1
HSPA2	Amp_17q25.2	0.668	1
KLK10	Amp_17q25.2	0.668	1
KRAS	Amp_17q25.2	0.668	1
MYF6	Amp_17q25.2	0.668	1
NUDT11	21q-Del	0.668	1
TDG	21q-Del	0.668	1
ZNF521	21q-Del	0.668	1
3q-Del	Amp_7q31.2	0.668	1
ARAP3	17p-Amp	0.669	1
ARHGAP33	17p-Amp	0.669	1
CSK	17p-Amp	0.669	1
CSK	Del_9p21.3	0.669	1
EMG1	17p-Amp	0.669	1
FAM160B2	17p-Amp	0.669	1
STXBP3	Del_9p21.3	0.669	1
ZNF532	17p-Amp	0.669	1
ZNF532	Del_9p21.3	0.669	1
17p-Amp	Amp_Xq11.2	0.669	1
CSGALNACT2	MTOR	0.67	1
DPCR1	MUC5B	0.67	1
GALNT7	Amp_7q31.2	0.67	1
RAI1	Amp_7q31.2	0.67	1
Amp_7q31.2	Amp_Xp11.4	0.67	1
DPCR1	Del_3p21.2	0.671	1
ATM	NF2	0.672	1
DPCR1	Del_1p36.31	0.672	1
MET	Del_10q23.31	0.672	1
TP53	2q-Amp	0.672	1
ARAP3	17p-Del	0.673	1
EGFR	18q-Del	0.673	1
KDELR3	18q-Del	0.673	1
PIK3CA	Del_13q12.13	0.673	1
SMARCA4	Del_11q21	0.673	1
STAG2	Del_14q31.1	0.673	1
STAM	18q-Del	0.673	1
STXBP3	17p-Del	0.673	1
ZNF532	17p-Del	0.673	1
ZNF814	Del_9p23	0.673	1
FGFR3	12q-Amp	0.674	1
MUC5B	Amp_19p13.2	0.674	1
NTRK3	12q-Amp	0.674	1
NUDT11	12q-Amp	0.674	1
SLC6A14	12q-Amp	0.674	1
ADCY8	KDM5C	0.675	1
ADCY8	SYNE1	0.675	1
ADCY8	3q-Amp	0.675	1
ADCY8	Del_4q34.3	0.675	1
CDKN2A	6q-Del	0.675	1
ECHDC2	6q-Del	0.675	1
EDIL3	6q-Del	0.675	1
HSPA2	6q-Del	0.675	1
KRAS	6q-Del	0.675	1
MTOR	Del_6q22.31	0.675	1
SYNE1	ZFYVE26	0.675	1
ZFYVE26	Del_4q34.3	0.675	1
DPCR1	Del_14q31.1	0.676	1
MET	STAG2	0.676	1
SETD2	3q-Del	0.676	1
ARHGAP33	16q-Amp	0.678	1
ARHGAP33	8p-Del	0.678	1
CSK	16q-Amp	0.678	1
CSK	8p-Del	0.678	1
EMG1	16q-Amp	0.678	1
FAM160B2	8p-Del	0.678	1
HNRNPM	Amp_7q31.2	0.678	1
KDM6A	PTEN	0.678	1
STXBP3	8p-Del	0.678	1
ZNF532	16q-Amp	0.678	1
ZNF532	8p-Del	0.678	1
ZNF598	16p-Amp	0.678	1
ZNF598	10q-Del	0.678	1
16q-Amp	Amp_Xq11.2	0.678	1
8p-Del	Amp_Xq11.2	0.678	1
20p-Amp	Del_4q34.3	0.679	1
20q-Amp	Del_4q34.3	0.679	1
HNRNPM	17p-Amp	0.68	1
MET	18q-Del	0.68	1
PIK3CA	17p-Amp	0.68	1
ARAP3	Del_1q43	0.682	1
ARAP3	Del_13q14.2	0.682	1
ARHGAP33	Del_13q14.2	0.682	1
FAM160B2	Del_1q43	0.682	1
FAM160B2	Del_13q14.2	0.682	1
FAM18B2	PTCH1	0.682	1
FAM18B2	RAI1	0.682	1
FAM18B2	SMARCB1	0.682	1
FAM18B2	Amp_Xp11.4	0.682	1
PTCH1	TP53	0.682	1
STXBP3	Del_1q43	0.682	1
STXBP3	Del_13q14.2	0.682	1
TP53	Amp_Xp11.4	0.682	1
ZNF532	Del_1q43	0.682	1
ZNF532	Del_13q14.2	0.682	1
Amp_7q31.2	Del_4q34.3	0.682	1
Amp_Xq11.2	Del_1q43	0.682	1
Amp_Xq11.2	Del_13q14.2	0.682	1
ATM	20p-Amp	0.683	1
ATM	20q-Amp	0.683	1
GALNT7	7q-Amp	0.683	1
RAI1	7q-Amp	0.683	1
7q-Amp	Amp_Xp11.4	0.683	1
ARHGAP33	Del_3p14.1	0.684	1
FAM160B2	Del_3p14.1	0.684	1
ZNF532	Del_3p14.1	0.684	1
Amp_Xq11.2	Del_3p14.1	0.684	1
ADCY8	Amp_17q25.2	0.685	1
NF2	Del_3p26.3	0.685	1
ZFYVE26	Amp_17q25.2	0.685	1
2q-Amp	3q-Del	0.685	1
EGFR	18p-Del	0.686	1
KDELR3	18p-Del	0.686	1
STAM	18p-Del	0.686	1
CSK	Del_9p23	0.687	1
GALNT7	7p-Amp	0.687	1
PIK3CA	17p-Del	0.687	1
RAI1	7p-Amp	0.687	1
STXBP3	Del_9p23	0.687	1
ZNF532	Del_9p23	0.687	1
7p-Amp	Amp_Xp11.4	0.687	1
ATM	6q-Del	0.688	1
MET	6p-Del	0.688	1
NF2	6q-Del	0.688	1
RAI1	Del_3p14.1	0.688	1
SMARCB1	Del_3p14.1	0.688	1
STAG2	12p-Amp	0.688	1
Amp_Xp11.4	Del_3p14.1	0.688	1
KDM6A	Amp_2q32.1	0.689	1
KDM6A	Del_10q23.31	0.689	1
NF1	Amp_2q32.1	0.689	1
NF1	Amp_19p13.2	0.689	1
NF1	Del_10q23.31	0.689	1
NFE2L2	Amp_2q32.1	0.689	1
NFE2L2	Amp_19p13.2	0.689	1
NFE2L2	Del_10q23.31	0.689	1
PIK3CA	Del_11q23.1	0.689	1
RAI1	3q-Del	0.689	1
SMARCB1	3q-Del	0.689	1
12p-Amp	Amp_5q35.1	0.689	1
Amp_2q32.1	Del_19p13.3	0.689	1
Amp_19p13.2	Del_19p13.3	0.689	1
CYP4F11	20p-Amp	0.69	1
CYP4F11	20q-Amp	0.69	1
FGFR3	20p-Amp	0.69	1
FGFR3	20q-Amp	0.69	1
NUDT11	20p-Amp	0.69	1
NUDT11	20q-Amp	0.69	1
SETD2	14q-Del	0.69	1
SLC6A14	20p-Amp	0.69	1
SLC6A14	20q-Amp	0.69	1
CSGALNACT2	Amp_5q35.1	0.691	1
STAG2	Del_11q21	0.691	1
Del_3p12.2	Del_16q23.3	0.691	1
16q-Amp	18p-Del	0.693	1
18p-Del	8p-Del	0.693	1
ADAM28	Amp_7q31.2	0.694	1
C9orf171	Amp_7q31.2	0.694	1
CXorf23	Amp_7q31.2	0.694	1
HNRNPM	7q-Amp	0.694	1
KIF16B	Amp_7q31.2	0.694	1
OR10G3	Amp_7q31.2	0.694	1
SLC1A7	Amp_7q31.2	0.694	1
SPATA13	Amp_7q31.2	0.694	1
7q-Amp	3q-Del	0.695	1
EDIL3	Del_3p21.2	0.696	1
KDM5C	14q-Del	0.696	1
MET	ZNF814	0.696	1
MET	Del_16q23.3	0.696	1
SETD2	9q-Del	0.696	1
5p-Amp	9q-Del	0.696	1
5p-Amp	Del_16q23.3	0.696	1
5q-Amp	Del_16q23.3	0.696	1
KDM5C	VHL	0.698	1
CDKN2A	Del_10q23.31	0.7	1
CYP4F11	Del_3p12.2	0.7	1
EDIL3	Del_10q23.31	0.7	1
FZR1	Del_10q23.31	0.7	1
HNRNPM	7p-Amp	0.7	1
HSPA2	Del_10q23.31	0.7	1
KLK10	Del_10q23.31	0.7	1
KRAS	Del_10q23.31	0.7	1
NFE2L2	3p-Amp	0.7	1
PLXDC2	Del_3p12.2	0.7	1
RIMBP3	Del_3p12.2	0.7	1
3p-Amp	Del_19p13.3	0.7	1
1q-Del	3q-Del	0.7	1
ARAP3	SETD2	0.701	1
ARHGAP33	SETD2	0.701	1
CSK	SETD2	0.701	1
CSK	5p-Amp	0.701	1
CSK	5q-Amp	0.701	1
EMG1	SETD2	0.701	1
EMG1	5p-Amp	0.701	1
EMG1	5q-Amp	0.701	1
FAM160B2	SETD2	0.701	1
FAM160B2	5p-Amp	0.701	1
FAM160B2	5q-Amp	0.701	1
KDM6A	6p-Del	0.701	1
MET	18p-Del	0.701	1
PIK3CA	Del_13q14.2	0.701	1
SETD2	STXBP3	0.701	1
SETD2	ZNF532	0.701	1
STXBP3	5p-Amp	0.701	1
STXBP3	5q-Amp	0.701	1
ZNF532	5p-Amp	0.701	1
ZNF532	5q-Amp	0.701	1
ADAM28	7q-Amp	0.702	1
C9orf171	7q-Amp	0.702	1
CXorf23	7q-Amp	0.702	1
KIF16B	7q-Amp	0.702	1
OR10G3	7q-Amp	0.702	1
SCYL1	7q-Amp	0.702	1
SLC1A7	7q-Amp	0.702	1
SPATA13	7q-Amp	0.702	1
Amp_5q35.1	Del_9p23	0.702	1
CARKD	VHL	0.703	1
CDCA8	VHL	0.703	1
DPYSL4	VHL	0.703	1
F2RL1	VHL	0.703	1
FLCN	VHL	0.703	1
IFNB1	VHL	0.703	1
KCNK1	VHL	0.703	1
NDUFA3	VHL	0.703	1
NEK8	VHL	0.703	1
NKX2-1	VHL	0.703	1
ONECUT2	VHL	0.703	1
RALB	VHL	0.703	1
RCN1	VHL	0.703	1
RIN1	VHL	0.703	1
RNF113B	VHL	0.703	1
TMEM47	VHL	0.703	1
VHL	ZNHIT1	0.703	1
ADAM28	7p-Amp	0.704	1
C9orf171	7p-Amp	0.704	1
CXorf23	7p-Amp	0.704	1
DPCR1	Del_3p26.3	0.704	1
GALNT7	Del_6q26	0.704	1
KIF16B	7p-Amp	0.704	1
OR10G3	7p-Amp	0.704	1
SCYL1	7p-Amp	0.704	1
SLC1A7	7p-Amp	0.704	1
SMARCB1	Del_6q26	0.704	1
SPATA13	7p-Amp	0.704	1
7p-Amp	3q-Del	0.704	1
ADCY8	PTEN	0.705	1
DPCR1	Del_1p31.1	0.705	1
GALNT7	MTOR	0.705	1
MTOR	PTCH1	0.705	1
MTOR	RAI1	0.705	1
MTOR	SMARCB1	0.705	1
MTOR	Amp_Xp11.4	0.705	1
MUC5B	RAI1	0.705	1
CSGALNACT2	KDM5C	0.706	1
CSGALNACT2	Del_4q34.3	0.706	1
DPCR1	KDM5C	0.706	1
DPCR1	SYNE1	0.706	1
DPCR1	3q-Amp	0.706	1
DPCR1	Del_4q34.3	0.706	1
EGFR	Amp_3q26.32	0.706	1
KDELR3	Amp_3q26.32	0.706	1
PRKAG2	Amp_3q26.32	0.706	1
STAM	Amp_3q26.32	0.706	1
ATM	STAG2	0.707	1
CDKN2A	6p-Del	0.707	1
ECHDC2	6p-Del	0.707	1
EDIL3	6p-Del	0.707	1
FZR1	6p-Del	0.707	1
HSPA2	6p-Del	0.707	1
KDM6A	1p-Del	0.707	1
KRAS	6p-Del	0.707	1
NEFH	STAG2	0.707	1
17q-Amp	Del_19p13.3	0.707	1
7q-Amp	Del_4q34.3	0.707	1
ARAP3	1q-Del	0.71	1
ARAP3	9q-Del	0.71	1
CDKN2A	1p-Del	0.71	1
CSK	9q-Del	0.71	1
ECHDC2	17q-Amp	0.71	1
ECHDC2	1p-Del	0.71	1
EDIL3	17q-Amp	0.71	1
EDIL3	1p-Del	0.71	1
ENO1	17q-Amp	0.71	1
FAM160B2	1q-Del	0.71	1
FZR1	17q-Amp	0.71	1
FZR1	1p-Del	0.71	1
HSPA2	17q-Amp	0.71	1
HSPA2	1p-Del	0.71	1
KLK10	17q-Amp	0.71	1
KLK10	1p-Del	0.71	1
KRAS	17q-Amp	0.71	1
KRAS	1p-Del	0.71	1
MYF6	17q-Amp	0.71	1
MYF6	1p-Del	0.71	1
PRODH	1p-Del	0.71	1
SMARCA4	20p-Amp	0.71	1
SMARCA4	20q-Amp	0.71	1
STXBP3	1q-Del	0.71	1
STXBP3	9q-Del	0.71	1
ZNF532	1q-Del	0.71	1
ZNF532	9q-Del	0.71	1
ZNF814	Del_1p36.31	0.71	1
1q-Del	Amp_Xq11.2	0.71	1
KDM6A	2q-Amp	0.711	1
NF1	2q-Amp	0.711	1
NFE2L2	2q-Amp	0.711	1
STAG2	Del_1p31.1	0.711	1
2q-Amp	Del_19p13.3	0.711	1
MET	16p-Amp	0.712	1
ZNF814	1q-Del	0.712	1
KDM6A	Del_8p23.2	0.713	1
NF1	Del_8p23.2	0.713	1
PTEN	SYNE1	0.713	1
PTEN	3q-Amp	0.713	1
STAG2	12q-Amp	0.713	1
Del_3p21.2	Del_11q23.1	0.713	1
Del_8p23.2	Del_19p13.3	0.713	1
EDIL3	Del_8p23.2	0.714	1
FZR1	Del_8p23.2	0.714	1
HSPA2	Del_8p23.2	0.714	1
KRAS	Del_8p23.2	0.714	1
MYF6	Del_8p23.2	0.714	1
PRODH	Del_8p23.2	0.714	1
SYNE1	7p-Amp	0.714	1
Xp-Del	Del_8p23.2	0.714	1
ADAM28	Del_6q26	0.715	1
ADCY8	PBRM1	0.715	1
ADCY8	Amp_2q32.1	0.715	1
ADCY8	Amp_19p13.2	0.715	1
ARAP3	12p-Amp	0.715	1
C9orf171	Del_6q26	0.715	1
CSK	12p-Amp	0.715	1
CSK	9p-Del	0.715	1
CXorf23	Del_6q26	0.715	1
DPCR1	14q-Del	0.715	1
EMG1	12p-Amp	0.715	1
IMPA2	Del_6q26	0.715	1
INPP5E	Del_6q26	0.715	1
OR10G3	Del_6q26	0.715	1
SCYL1	Del_6q26	0.715	1
SLC14A1	Del_6q26	0.715	1
SPATA13	Del_6q26	0.715	1
STXBP3	9p-Del	0.715	1
VCL	Del_6q26	0.715	1
ZNF532	9p-Del	0.715	1
EDIL3	Del_3p26.3	0.716	1
MET	PIK3CA	0.716	1
3q-Amp	Del_13q12.13	0.716	1
Del_14q31.1	Del_16q23.3	0.716	1
Del_6q26	Del_14q31.1	0.717	1
ARHGAP33	3p-Del	0.718	1
CARKD	Del_3p14.1	0.718	1
CDCA8	Del_3p14.1	0.718	1
CDKN2A	16p-Amp	0.718	1
CDKN2A	10q-Del	0.718	1
DPYSL4	Del_3p14.1	0.718	1
ECHDC2	16p-Amp	0.718	1
EDIL3	16p-Amp	0.718	1
EDIL3	10q-Del	0.718	1
F2RL1	Del_3p14.1	0.718	1
FAM160B2	3p-Del	0.718	1
FLCN	Del_3p14.1	0.718	1
FZR1	16p-Amp	0.718	1
FZR1	10q-Del	0.718	1
HSPA2	16p-Amp	0.718	1
HSPA2	10q-Del	0.718	1
IFNB1	Del_3p14.1	0.718	1
KLK10	16p-Amp	0.718	1
KLK10	10q-Del	0.718	1
KRAS	16p-Amp	0.718	1
KRAS	10q-Del	0.718	1
MYF6	16p-Amp	0.718	1
NKX2-1	Del_3p14.1	0.718	1
RALB	Del_3p14.1	0.718	1
RCN1	Del_3p14.1	0.718	1
RNF113B	Del_3p14.1	0.718	1
RNF144A	Del_3p14.1	0.718	1
ZNF532	3p-Del	0.718	1
ZNHIT1	Del_3p14.1	0.718	1
CYP4F11	PBRM1	0.719	1
FGFR3	PBRM1	0.719	1
GPR50	18q-Del	0.719	1
KDM6A	10q-Del	0.719	1
NF1	16p-Amp	0.719	1
NF1	10q-Del	0.719	1
NFE2L2	10q-Del	0.719	1
NUDT11	18q-Del	0.719	1
PBRM1	SLC6A14	0.719	1
PLXDC2	18q-Del	0.719	1
RIMBP3	18q-Del	0.719	1
SLC6A14	18q-Del	0.719	1
ZNF521	18q-Del	0.719	1
ZNF814	9p-Del	0.719	1
12p-Amp	Del_16q23.3	0.719	1
ARAP3	13q-Del	0.72	1
ARHGAP33	13q-Del	0.72	1
EGFR	FAM18B2	0.72	1
EGFR	TP53	0.72	1
FAM160B2	13q-Del	0.72	1
FAM18B2	KDELR3	0.72	1
FAM18B2	PRKAG2	0.72	1
FAM18B2	Amp_Xp22.2	0.72	1
STXBP3	13q-Del	0.72	1
TP53	Amp_Xp22.2	0.72	1
ZNF532	13q-Del	0.72	1
13q-Del	Amp_Xq11.2	0.72	1
5q-Amp	18q-Del	0.721	1
5q-Amp	Del_9p21.3	0.721	1
Del_1p31.1	Del_3p12.2	0.721	1
SMARCA4	STAG2	0.722	1
Amp_2q32.1	Del_10q23.31	0.722	1
STAG2	14q-Del	0.723	1
CSK	21q-Del	0.724	1
FAM160B2	21q-Del	0.724	1
SMARCA4	6q-Del	0.724	1
ZNF532	21q-Del	0.724	1
21q-Del	Amp_Xq11.2	0.724	1
ADCY8	3p-Amp	0.725	1
ATM	ZNF814	0.725	1
CDKN2A	Del_2q37.3	0.725	1
ECHDC2	Del_2q37.3	0.725	1
EDIL3	Del_2q37.3	0.725	1
ENO1	Del_2q37.3	0.725	1
FZR1	Del_2q37.3	0.725	1
GALNT7	Del_6q22.31	0.725	1
HSPA2	Del_2q37.3	0.725	1
KLK10	Del_2q37.3	0.725	1
KRAS	Del_2q37.3	0.725	1
NF2	ZNF814	0.725	1
NF2	Del_16q23.3	0.725	1
SETD2	Del_14q31.1	0.725	1
SMARCB1	Del_6q22.31	0.725	1
ZFYVE26	3p-Amp	0.725	1
SYNE1	17p-Amp	0.726	1
3p-Del	Del_10q23.31	0.726	1
ADAM28	Del_6q22.31	0.727	1
C16orf78	Del_6q22.31	0.727	1
C9orf171	Del_6q22.31	0.727	1
CXorf23	Del_6q22.31	0.727	1
EGFR	3q-Del	0.727	1
IMPA2	Del_6q22.31	0.727	1
INPP5E	Del_6q22.31	0.727	1
KDELR3	3q-Del	0.727	1
KIF16B	Del_6q22.31	0.727	1
OR10G3	Del_6q22.31	0.727	1
PRKAG2	3q-Del	0.727	1
SCYL1	Del_6q22.31	0.727	1
SLC14A1	Del_6q22.31	0.727	1
SPATA13	Del_6q22.31	0.727	1
STAM	3q-Del	0.727	1
VCL	Del_6q22.31	0.727	1
17q-Amp	Del_11q21	0.727	1
3q-Del	Amp_Xp22.2	0.727	1
Amp_3q26.32	Del_9p21.3	0.727	1
Del_1p36.31	Del_3p14.1	0.728	1
ARAP3	12q-Amp	0.729	1
ARHGAP33	12q-Amp	0.729	1
CSK	12q-Amp	0.729	1
EMG1	12q-Amp	0.729	1
HNRNPM	5p-Amp	0.729	1
HNRNPM	5q-Amp	0.729	1
KDM5C	Amp_19p13.2	0.729	1
NF2	18q-Del	0.729	1
PIK3CA	Del_11q21	0.729	1
SYNE1	Amp_2q32.1	0.729	1
3p-Del	Del_11q21	0.729	1
Amp_2q32.1	Del_4q34.3	0.729	1
ADAM28	Del_1p36.31	0.73	1
C16orf78	Del_1p36.31	0.73	1
C9orf171	Del_1p36.31	0.73	1
CXorf23	Del_1p36.31	0.73	1
INPP5E	Del_1p36.31	0.73	1
KDM6A	Del_2q37.3	0.73	1
NF1	Del_2q37.3	0.73	1
OR10G3	Del_1p36.31	0.73	1
PTCH1	Del_1p36.31	0.73	1
RAI1	Del_1p36.31	0.73	1
SLC14A1	Del_1p36.31	0.73	1
SLC1A7	Del_1p36.31	0.73	1
SMARCB1	Del_1p36.31	0.73	1
SPATA13	Del_1p36.31	0.73	1
VCL	Del_1p36.31	0.73	1
ZNF598	16q-Amp	0.73	1
Amp_Xp11.4	Del_1p36.31	0.73	1
FGFR3	18p-Del	0.731	1
GPR50	18p-Del	0.731	1
NUDT11	18p-Del	0.731	1
PLXDC2	18p-Del	0.731	1
RIMBP3	18p-Del	0.731	1
SLC6A14	18p-Del	0.731	1
SYNE1	Amp_17q25.2	0.731	1
ZNF521	18p-Del	0.731	1
Amp_17q25.2	Del_4q34.3	0.731	1
RAI1	3p-Del	0.732	1
SMARCB1	3p-Del	0.732	1
3p-Del	Amp_Xp11.4	0.732	1
ADAM28	Del_14q31.1	0.733	1
ADCY8	Del_10q23.31	0.733	1
C9orf171	Del_14q31.1	0.733	1
CXorf23	Del_14q31.1	0.733	1
DPCR1	PTEN	0.733	1
MET	Amp_3q26.32	0.733	1
PHF10	Del_14q31.1	0.733	1
PIK3CA	VHL	0.733	1
SLC14A1	Del_14q31.1	0.733	1
SLC1A7	Del_14q31.1	0.733	1
SPATA13	Del_14q31.1	0.733	1
TP53	3q-Del	0.733	1
KDM6A	Del_11q23.1	0.734	1
PTCH1	Del_14q31.1	0.734	1
ADCY8	2q-Amp	0.736	1
CDKN2A	Del_13q12.13	0.736	1
ECHDC2	Del_13q12.13	0.736	1
EDIL3	Del_13q12.13	0.736	1
ENO1	Del_13q12.13	0.736	1
FZR1	Del_13q12.13	0.736	1
HSPA2	Del_13q12.13	0.736	1
KLK10	Del_13q12.13	0.736	1
KRAS	Del_13q12.13	0.736	1
MET	ZNF598	0.736	1
MTOR	6p-Del	0.736	1
MYF6	Del_13q12.13	0.736	1
PBRM1	5p-Amp	0.736	1
PRODH	Del_13q12.13	0.736	1
GALNT7	SYNE1	0.737	1
KDELR3	Amp_7q31.2	0.737	1
KDM5C	SMARCB1	0.737	1
KDM5C	Amp_Xp11.4	0.737	1
PRKAG2	Amp_7q31.2	0.737	1
PTCH1	SYNE1	0.737	1
PTCH1	3q-Amp	0.737	1
PTCH1	Del_4q34.3	0.737	1
RAI1	SYNE1	0.737	1
RAI1	Del_4q34.3	0.737	1
SYNE1	Amp_Xp11.4	0.737	1
3q-Amp	Amp_Xp11.4	0.737	1
Amp_7q31.2	Amp_Xp22.2	0.737	1
Amp_Xp11.4	Del_4q34.3	0.737	1
CDCA8	3p-Del	0.738	1
DPYSL4	3p-Del	0.738	1
F2RL1	3p-Del	0.738	1
FLCN	3p-Del	0.738	1
IFNB1	3p-Del	0.738	1
MUC5B	9q-Del	0.738	1
NKX2-1	3p-Del	0.738	1
RALB	3p-Del	0.738	1
RCN1	3p-Del	0.738	1
RNF113B	3p-Del	0.738	1
RNF144A	3p-Del	0.738	1
ZNHIT1	3p-Del	0.738	1
GPR50	Del_3p21.2	0.739	1
KDM5C	18q-Del	0.739	1
NUDT11	Del_3p21.2	0.739	1
PLXDC2	Del_3p21.2	0.739	1
RIMBP3	Del_3p21.2	0.739	1
ZNF521	Del_3p21.2	0.739	1
3q-Amp	18q-Del	0.739	1
ADAM28	Amp_5q35.1	0.74	1
C9orf171	Amp_5q35.1	0.74	1
CDKN2A	17p-Amp	0.74	1
CXorf23	Amp_5q35.1	0.74	1
ECHDC2	17p-Amp	0.74	1
ECHDC2	Del_9p21.3	0.74	1
EDIL3	17p-Amp	0.74	1
EDIL3	Del_9p21.3	0.74	1
ENO1	17p-Amp	0.74	1
FZR1	17p-Amp	0.74	1
HSPA2	17p-Amp	0.74	1
HSPA2	Del_9p21.3	0.74	1
KLK10	17p-Amp	0.74	1
KLK10	Del_9p21.3	0.74	1
KRAS	17p-Amp	0.74	1
KRAS	Del_9p21.3	0.74	1
MYF6	17p-Amp	0.74	1
MYF6	Del_9p21.3	0.74	1
OR10G3	Amp_5q35.1	0.74	1
PHF10	Amp_5q35.1	0.74	1
PRODH	Del_9p21.3	0.74	1
PTEN	20p-Amp	0.74	1
PTEN	20q-Amp	0.74	1
SCYL1	Amp_5q35.1	0.74	1
SLC1A7	Amp_5q35.1	0.74	1
SMARCA4	Del_16q23.3	0.74	1
SPATA13	Amp_5q35.1	0.74	1
Xp-Del	Del_9p21.3	0.74	1
EGFR	MTOR	0.741	1
EGFR	MUC5B	0.741	1
KDELR3	MTOR	0.741	1
MET	Del_1p36.31	0.741	1
MTOR	PRKAG2	0.741	1
MTOR	STAM	0.741	1
MTOR	Amp_Xp22.2	0.741	1
MUC5B	PRKAG2	0.741	1
MUC5B	STAM	0.741	1
CSGALNACT2	Amp_19p13.2	0.742	1
DPCR1	Amp_2q32.1	0.742	1
ATM	HNRNPM	0.743	1
ATM	PIK3CA	0.743	1
CDKN2A	17p-Del	0.743	1
ECHDC2	17p-Del	0.743	1
EDIL3	17p-Del	0.743	1
FZR1	17p-Del	0.743	1
HNRNPM	9q-Del	0.743	1
HSPA2	17p-Del	0.743	1
KLK10	17p-Del	0.743	1
KRAS	17p-Del	0.743	1
NEFH	PIK3CA	0.743	1
NEFH	Del_3p12.2	0.743	1
NF2	PIK3CA	0.743	1
NF2	Del_3p12.2	0.743	1
PRODH	17p-Del	0.743	1
ZNF598	Del_9p23	0.743	1
5p-Amp	6p-Del	0.743	1
ADCY8	6p-Del	0.744	1
ARAP3	20p-Amp	0.744	1
ARAP3	20q-Amp	0.744	1
CSK	20p-Amp	0.744	1
CSK	20q-Amp	0.744	1
FAM160B2	20p-Amp	0.744	1
FAM160B2	20q-Amp	0.744	1
ZNF532	20p-Amp	0.744	1
ZNF532	20q-Amp	0.744	1
20p-Amp	Amp_Xq11.2	0.744	1
20q-Amp	Amp_Xq11.2	0.744	1
2q-Amp	9p-Del	0.744	1
3q-Del	Del_2q37.3	0.744	1
Del_3p21.2	Del_11q21	0.744	1
SYNE1	3p-Amp	0.745	1
3p-Amp	Del_4q34.3	0.745	1
PTCH1	Amp_5q35.1	0.746	1
RAI1	Amp_5q35.1	0.746	1
14q-Del	Del_1q43	0.746	1
Amp_5q35.1	Amp_Xp11.4	0.746	1
CDKN2A	16q-Amp	0.747	1
ECHDC2	16q-Amp	0.747	1
EDIL3	16q-Amp	0.747	1
EDIL3	8p-Del	0.747	1
FZR1	16q-Amp	0.747	1
FZR1	8p-Del	0.747	1
HSPA2	16q-Amp	0.747	1
HSPA2	8p-Del	0.747	1
KLK10	16q-Amp	0.747	1
KLK10	8p-Del	0.747	1
KRAS	16q-Amp	0.747	1
KRAS	8p-Del	0.747	1
MYF6	16q-Amp	0.747	1
MYF6	8p-Del	0.747	1
PRODH	8p-Del	0.747	1
8p-Del	Xp-Del	0.747	1
ADAM28	Del_1p31.1	0.748	1
C16orf78	Del_1p31.1	0.748	1
C9orf171	Del_1p31.1	0.748	1
CXorf23	Del_1p31.1	0.748	1
INPP5E	Del_1p31.1	0.748	1
KDELR3	7q-Amp	0.748	1
NF2	18p-Del	0.748	1
OR10G3	Del_1p31.1	0.748	1
SCYL1	Del_1p31.1	0.748	1
SLC14A1	Del_1p31.1	0.748	1
SLC1A7	Del_1p31.1	0.748	1
SPATA13	Del_1p31.1	0.748	1
VCL	Del_1p31.1	0.748	1
7q-Amp	Amp_Xp22.2	0.748	1
14q-Del	Del_6q26	0.748	1
ADCY8	17q-Amp	0.749	1
ADCY8	1p-Del	0.749	1
CYP4F11	Amp_3q26.32	0.749	1
NUDT11	Amp_3q26.32	0.749	1
ZFYVE26	17q-Amp	0.749	1
ZNF521	Amp_3q26.32	0.749	1
ZNF814	Del_1p31.1	0.75	1
12q-Amp	Amp_5q35.1	0.75	1
ATM	6p-Del	0.751	1
CDKN2A	Del_1q43	0.751	1
CDKN2A	Del_13q14.2	0.751	1
ECHDC2	Del_1q43	0.751	1
ECHDC2	Del_13q14.2	0.751	1
EDIL3	Del_1q43	0.751	1
EDIL3	Del_13q14.2	0.751	1
EGFR	VHL	0.751	1
ENO1	Del_13q14.2	0.751	1
FZR1	Del_1q43	0.751	1
FZR1	Del_13q14.2	0.751	1
HSPA2	Del_1q43	0.751	1
HSPA2	Del_13q14.2	0.751	1
KLK10	Del_1q43	0.751	1
KLK10	Del_13q14.2	0.751	1
KRAS	Del_1q43	0.751	1
KRAS	Del_13q14.2	0.751	1
MYF6	Del_13q14.2	0.751	1
PRODH	Del_1q43	0.751	1
PRODH	Del_13q14.2	0.751	1
DPCR1	3p-Amp	0.752	1
KDELR3	7p-Amp	0.752	1
SYNE1	Del_3p26.3	0.752	1
7p-Amp	Amp_Xp22.2	0.752	1
NEFH	7p-Amp	0.753	1
ADAM28	14q-Del	0.754	1
ADCY8	Del_8p23.2	0.754	1
C9orf171	14q-Del	0.754	1
CXorf23	14q-Del	0.754	1
KDM6A	Del_9p21.3	0.754	1
MET	TP53	0.754	1
NF1	Del_9p21.3	0.754	1
NFE2L2	Del_9p21.3	0.754	1
PHF10	14q-Del	0.754	1
SLC14A1	14q-Del	0.754	1
SLC1A7	14q-Del	0.754	1
SPATA13	14q-Del	0.754	1
ECHDC2	Del_9p23	0.755	1
EDIL3	Del_9p23	0.755	1
HSPA2	Del_9p23	0.755	1
KLK10	Del_9p23	0.755	1
KRAS	Del_9p23	0.755	1
MYF6	Del_9p23	0.755	1
PRODH	Del_9p23	0.755	1
SETD2	18p-Del	0.755	1
SYNE1	Del_1q43	0.755	1
3q-Amp	Del_13q14.2	0.755	1
5p-Amp	18p-Del	0.755	1
Xp-Del	Del_9p23	0.755	1
MUC5B	Del_8p23.2	0.756	1
ADCY8	Del_11q23.1	0.757	1
HNRNPM	SMARCA4	0.757	1
KDM6A	MET	0.757	1
MET	NFE2L2	0.757	1
PIK3CA	SMARCA4	0.757	1
PIK3CA	13q-Del	0.757	1
ZFYVE26	Del_11q23.1	0.757	1
ATM	1p-Del	0.758	1
PTCH1	Del_1p31.1	0.759	1
RAI1	Del_1p31.1	0.759	1
STAG2	6q-Del	0.759	1
ADCY8	10q-Del	0.76	1
KDM6A	17p-Del	0.76	1
ZFYVE26	16p-Amp	0.76	1
CYP4F11	FAM18B2	0.761	1
CYP4F11	TP53	0.761	1
DPCR1	2q-Amp	0.761	1
FAM18B2	FGFR3	0.761	1
FAM18B2	GPR50	0.761	1
FAM18B2	NTRK3	0.761	1
FAM18B2	PLXDC2	0.761	1
FAM18B2	RIMBP3	0.761	1
NUDT11	TP53	0.761	1
PLXDC2	TP53	0.761	1
TDG	TP53	0.761	1
14q-Del	Del_16q23.3	0.761	1
ATM	ZNF598	0.762	1
NEFH	ZNF598	0.762	1
PTCH1	PTEN	0.762	1
PTEN	RAI1	0.762	1
PTEN	SMARCB1	0.762	1
SETD2	ZNF598	0.762	1
SYNE1	2q-Amp	0.762	1
2q-Amp	Del_4q34.3	0.762	1
FAM18B2	MTOR	0.763	1
FAM18B2	MUC5B	0.763	1
KDM5C	18p-Del	0.763	1
NUDT11	Del_3p26.3	0.763	1
PLXDC2	Del_3p26.3	0.763	1
RIMBP3	Del_3p26.3	0.763	1
ZNF521	Del_3p26.3	0.763	1
3q-Amp	18p-Del	0.763	1
5p-Amp	6q-Del	0.763	1
ADAM28	Amp_17q25.2	0.764	1
ATM	Del_8p23.2	0.764	1
C16orf78	Amp_17q25.2	0.764	1
CXorf23	Amp_17q25.2	0.764	1
IMPA2	Amp_17q25.2	0.764	1
KIF16B	Amp_17q25.2	0.764	1
MTOR	14q-Del	0.764	1
NF2	Del_8p23.2	0.764	1
OR10G3	Amp_17q25.2	0.764	1
PHF10	Amp_17q25.2	0.764	1
SCYL1	Amp_17q25.2	0.764	1
SLC1A7	Amp_17q25.2	0.764	1
VCL	Amp_17q25.2	0.764	1
5p-Amp	Del_11q23.1	0.764	1
5q-Amp	Del_11q23.1	0.764	1
10q-Del	Amp_2q32.1	0.764	1
1q-Del	Del_14q31.1	0.764	1
CDKN2A	SETD2	0.766	1
CDKN2A	5p-Amp	0.766	1
CDKN2A	5q-Amp	0.766	1
ECHDC2	SETD2	0.766	1
EDIL3	5q-Amp	0.766	1
EGFR	Del_6q26	0.766	1
ENO1	SETD2	0.766	1
FZR1	5p-Amp	0.766	1
FZR1	5q-Amp	0.766	1
HSPA2	SETD2	0.766	1
KDM6A	8p-Del	0.766	1
KLK10	SETD2	0.766	1
KLK10	5p-Amp	0.766	1
KLK10	5q-Amp	0.766	1
KRAS	SETD2	0.766	1
KRAS	5p-Amp	0.766	1
KRAS	5q-Amp	0.766	1
NF1	16q-Amp	0.766	1
NF1	8p-Del	0.766	1
PRKAG2	Del_6q26	0.766	1
PRODH	SETD2	0.766	1
16q-Amp	Del_19p13.3	0.766	1
5p-Amp	Xp-Del	0.766	1
5q-Amp	Xp-Del	0.766	1
8p-Del	Del_19p13.3	0.766	1
Amp_7q31.2	Del_9p21.3	0.766	1
CYP4F11	3q-Del	0.767	1
FGFR3	3q-Del	0.767	1
NTRK3	3q-Del	0.767	1
NUDT11	3q-Del	0.767	1
PLXDC2	3q-Del	0.767	1
PTCH1	14q-Del	0.767	1
RIMBP3	3q-Del	0.767	1
SLC6A14	3q-Del	0.767	1
TDG	3q-Del	0.767	1
ZNF521	3q-Del	0.767	1
14q-Del	Amp_Xp11.4	0.767	1
Amp_2q32.1	Amp_5q35.1	0.767	1
ARHGAP33	18q-Del	0.768	1
CSK	18q-Del	0.768	1
STXBP3	18q-Del	0.768	1
ZNF532	18q-Del	0.768	1
Del_3p14.1	Del_10q23.31	0.768	1
ADAM28	6q-Del	0.769	1
C16orf78	6q-Del	0.769	1
C9orf171	6q-Del	0.769	1
CXorf23	6q-Del	0.769	1
IMPA2	6q-Del	0.769	1
INPP5E	6q-Del	0.769	1
KDM6A	Del_11q21	0.769	1
KIF16B	6q-Del	0.769	1
OR10G3	6q-Del	0.769	1
SCYL1	6q-Del	0.769	1
SLC14A1	6q-Del	0.769	1
SPATA13	6q-Del	0.769	1
VCL	6q-Del	0.769	1
ADCY8	Del_2q37.3	0.77	1
EGFR	KDM5C	0.77	1
EGFR	3q-Amp	0.77	1
EGFR	Del_4q34.3	0.77	1
KDELR3	KDM5C	0.77	1
KDELR3	SYNE1	0.77	1
KDM5C	PRKAG2	0.77	1
KDM5C	STAM	0.77	1
KDM5C	Amp_Xp22.2	0.77	1
PRKAG2	3q-Amp	0.77	1
PRKAG2	Del_4q34.3	0.77	1
STAM	SYNE1	0.77	1
STAM	3q-Amp	0.77	1
STAM	Del_4q34.3	0.77	1
SYNE1	Amp_Xp22.2	0.77	1
3q-Amp	Amp_Xp22.2	0.77	1
Amp_Xp22.2	Del_4q34.3	0.77	1
ADCY8	Del_3p14.1	0.771	1
GALNT7	Amp_2q32.1	0.771	1
GALNT7	Amp_19p13.2	0.771	1
HNRNPM	12q-Amp	0.771	1
PBRM1	PIK3CA	0.771	1
PIK3CA	STAG2	0.771	1
PTCH1	Amp_2q32.1	0.771	1
PTEN	Amp_19p13.2	0.771	1
RAI1	Amp_2q32.1	0.771	1
RAI1	Amp_19p13.2	0.771	1
SMARCB1	Amp_2q32.1	0.771	1
SMARCB1	Amp_19p13.2	0.771	1
NFE2L2	Del_1q43	0.772	1
PIK3CA	Del_3p14.1	0.772	1
Del_1q43	Del_19p13.3	0.772	1
MET	16q-Amp	0.773	1
18p-Del	Amp_17q25.2	0.773	1
CDKN2A	1q-Del	0.774	1
CDKN2A	9q-Del	0.774	1
ECHDC2	1q-Del	0.774	1
ECHDC2	9q-Del	0.774	1
EDIL3	1q-Del	0.774	1
EDIL3	9q-Del	0.774	1
FZR1	1q-Del	0.774	1
HSPA2	1q-Del	0.774	1
HSPA2	9q-Del	0.774	1
KLK10	1q-Del	0.774	1
KLK10	9q-Del	0.774	1
KRAS	1q-Del	0.774	1
KRAS	9q-Del	0.774	1
MYF6	1q-Del	0.774	1
MYF6	9q-Del	0.774	1
PRODH	1q-Del	0.774	1
PRODH	9q-Del	0.774	1
PTEN	Amp_7q31.2	0.775	1
SMARCA4	ZNF598	0.775	1
SMARCA4	Del_3p14.1	0.775	1
ZNF598	9q-Del	0.775	1
6q-Del	Del_3p26.3	0.775	1
ATM	Amp_3q26.32	0.776	1
18p-Del	3p-Del	0.776	1
DPCR1	Del_10q23.31	0.777	1
KDM6A	Del_9p23	0.777	1
NF1	Del_9p23	0.777	1
NFE2L2	Del_9p23	0.777	1
ARHGAP33	18p-Del	0.778	1
CDKN2A	12p-Amp	0.778	1
CDKN2A	9p-Del	0.778	1
CSK	18p-Del	0.778	1
DPCR1	PBRM1	0.778	1
ECHDC2	12p-Amp	0.778	1
ECHDC2	9p-Del	0.778	1
EDIL3	12p-Amp	0.778	1
EDIL3	9p-Del	0.778	1
FZR1	12p-Amp	0.778	1
HSPA2	12p-Amp	0.778	1
HSPA2	9p-Del	0.778	1
KLK10	12p-Amp	0.778	1
KLK10	9p-Del	0.778	1
KRAS	12p-Amp	0.778	1
KRAS	9p-Del	0.778	1
MET	ZFYVE26	0.778	1
MYF6	9p-Del	0.778	1
PRKAG2	Del_3p14.1	0.778	1
PRODH	9p-Del	0.778	1
STAG2	18q-Del	0.778	1
STXBP3	18p-Del	0.778	1
ZNF532	18p-Del	0.778	1
9p-Del	Xp-Del	0.778	1
FGFR3	MTOR	0.779	1
FGFR3	MUC5B	0.779	1
GPR50	MTOR	0.779	1
GPR50	MUC5B	0.779	1
MTOR	NTRK3	0.779	1
MTOR	NUDT11	0.779	1
MTOR	RIMBP3	0.779	1
MTOR	SLC6A14	0.779	1
MTOR	TDG	0.779	1
MTOR	ZNF521	0.779	1
MUC5B	TDG	0.779	1
MUC5B	ZNF521	0.779	1
PTCH1	3p-Amp	0.779	1
20p-Amp	Del_8p23.2	0.779	1
20q-Amp	Del_8p23.2	0.779	1
3p-Amp	Amp_Xp11.4	0.779	1
SETD2	16p-Amp	0.78	1
ATM	KDM6A	0.781	1
ATM	Del_19p13.3	0.781	1
CDKN2A	13q-Del	0.781	1
CSGALNACT2	Del_11q23.1	0.781	1
DPCR1	Del_11q23.1	0.781	1
ECHDC2	13q-Del	0.781	1
EDIL3	13q-Del	0.781	1
ENO1	13q-Del	0.781	1
FZR1	13q-Del	0.781	1
HSPA2	13q-Del	0.781	1
KDM6A	NEFH	0.781	1
KDM6A	NF2	0.781	1
KLK10	13q-Del	0.781	1
KRAS	13q-Del	0.781	1
NEFH	NF1	0.781	1
PRODH	13q-Del	0.781	1
ZNF598	12p-Amp	0.781	1
ZNF598	9p-Del	0.781	1
CDCA8	Del_3p12.2	0.782	1
DPYSL4	Del_3p12.2	0.782	1
F2RL1	Del_3p12.2	0.782	1
FLCN	Del_3p12.2	0.782	1
IFNB1	Del_3p12.2	0.782	1
MUC5B	12q-Amp	0.782	1
NDUFA3	Del_3p12.2	0.782	1
NKX2-1	Del_3p12.2	0.782	1
RALB	Del_3p12.2	0.782	1
RCN1	Del_3p12.2	0.782	1
RNF113B	Del_3p12.2	0.782	1
RNF144A	Del_3p12.2	0.782	1
TMEM47	Del_3p12.2	0.782	1
ZNHIT1	Del_3p12.2	0.782	1
7p-Amp	18q-Del	0.782	1
5q-Amp	Del_3p12.2	0.783	1
ATM	Del_2q37.3	0.784	1
EGFR	Del_6q22.31	0.784	1
GALNT7	Amp_17q25.2	0.784	1
PRKAG2	Del_6q22.31	0.784	1
PTCH1	Amp_17q25.2	0.784	1
RAI1	Amp_17q25.2	0.784	1
CDKN2A	21q-Del	0.785	1
ECHDC2	21q-Del	0.785	1
EDIL3	21q-Del	0.785	1
ENO1	21q-Del	0.785	1
FZR1	21q-Del	0.785	1
HSPA2	21q-Del	0.785	1
KLK10	21q-Del	0.785	1
KRAS	21q-Del	0.785	1
MET	MTOR	0.785	1
MET	Del_1p31.1	0.785	1
PTEN	3p-Amp	0.785	1
ADCY8	Del_13q12.13	0.786	1
HNRNPM	ZNF814	0.786	1
PIK3CA	ZNF814	0.786	1
ADAM28	Del_10q23.31	0.788	1
C16orf78	Del_10q23.31	0.788	1
C9orf171	Del_10q23.31	0.788	1
CDKN2A	VHL	0.788	1
CXorf23	Del_10q23.31	0.788	1
ECHDC2	VHL	0.788	1
FZR1	VHL	0.788	1
GALNT7	2q-Amp	0.788	1
IMPA2	Del_10q23.31	0.788	1
INPP5E	Del_10q23.31	0.788	1
KDELR3	Del_1p36.31	0.788	1
KIF16B	Del_10q23.31	0.788	1
KLK10	VHL	0.788	1
MYF6	VHL	0.788	1
OR10G3	Del_10q23.31	0.788	1
PTCH1	2q-Amp	0.788	1
RAI1	2q-Amp	0.788	1
SCYL1	Del_10q23.31	0.788	1
SLC14A1	Del_10q23.31	0.788	1
SMARCB1	2q-Amp	0.788	1
STAG2	ZNF598	0.788	1
STAM	Del_1p36.31	0.788	1
Amp_Xp22.2	Del_1p36.31	0.788	1
CDKN2A	12q-Amp	0.789	1
ECHDC2	12q-Amp	0.789	1
EDIL3	12q-Amp	0.789	1
FZR1	12q-Amp	0.789	1
HSPA2	12q-Amp	0.789	1
KLK10	12q-Amp	0.789	1
KRAS	12q-Amp	0.789	1
PRODH	12q-Amp	0.789	1
ADCY8	Del_11q21	0.79	1
ZFYVE26	Del_11q21	0.79	1
ADCY8	17p-Amp	0.791	1
ARHGAP33	Del_3p12.2	0.791	1
CARKD	PBRM1	0.791	1
CDCA8	PBRM1	0.791	1
DPCR1	17q-Amp	0.791	1
DPCR1	1p-Del	0.791	1
DPYSL4	PBRM1	0.791	1
F2RL1	PBRM1	0.791	1
FAM160B2	Del_3p12.2	0.791	1
FLCN	PBRM1	0.791	1
IFNB1	PBRM1	0.791	1
KCNK1	PBRM1	0.791	1
KDELR3	Del_14q31.1	0.791	1
NDUFA3	PBRM1	0.791	1
NKX2-1	PBRM1	0.791	1
ONECUT2	PBRM1	0.791	1
PBRM1	PRDX5	0.791	1
PBRM1	RALB	0.791	1
PBRM1	RCN1	0.791	1
PBRM1	RIN1	0.791	1
PBRM1	RNF113B	0.791	1
PBRM1	TMEM47	0.791	1
PBRM1	ZNHIT1	0.791	1
ZFYVE26	17p-Amp	0.791	1
ZFYVE26	Del_9p21.3	0.791	1
ZNF532	Del_3p12.2	0.791	1
Amp_Xq11.2	Del_3p12.2	0.791	1
EGFR	PTEN	0.792	1
GALNT7	6q-Del	0.792	1
HNRNPM	20p-Amp	0.792	1
HNRNPM	20q-Amp	0.792	1
KDELR3	PTEN	0.792	1
PRKAG2	PTEN	0.792	1
PTEN	STAM	0.792	1
PTEN	Amp_Xp22.2	0.792	1
SMARCB1	6q-Del	0.792	1
ARAP3	Amp_3q26.32	0.793	1
ARHGAP33	Amp_3q26.32	0.793	1
CSK	Amp_3q26.32	0.793	1
EMG1	Amp_3q26.32	0.793	1
FAM160B2	Amp_3q26.32	0.793	1
KDM5C	SETD2	0.793	1
KDM5C	5p-Amp	0.793	1
KDM6A	SMARCA4	0.793	1
NFE2L2	SMARCA4	0.793	1
ZNF532	Amp_3q26.32	0.793	1
3q-Amp	5p-Amp	0.793	1
Amp_3q26.32	Amp_Xq11.2	0.793	1
ADAM28	6p-Del	0.794	1
C16orf78	6p-Del	0.794	1
C9orf171	6p-Del	0.794	1
CXorf23	6p-Del	0.794	1
IMPA2	6p-Del	0.794	1
INPP5E	6p-Del	0.794	1
KDM5C	Del_11q23.1	0.794	1
KIF16B	6p-Del	0.794	1
NF2	TP53	0.794	1
OR10G3	6p-Del	0.794	1
SCYL1	6p-Del	0.794	1
SLC14A1	6p-Del	0.794	1
SPATA13	6p-Del	0.794	1
VCL	6p-Del	0.794	1
ZNF598	Del_1p36.31	0.794	1
17p-Del	3q-Del	0.794	1
DPCR1	Del_8p23.2	0.795	1
KDM6A	5p-Amp	0.795	1
KDM6A	5q-Amp	0.795	1
NFE2L2	5p-Amp	0.795	1
NFE2L2	5q-Amp	0.795	1
PTEN	7q-Amp	0.795	1
ADAM28	17q-Amp	0.796	1
ADAM28	1p-Del	0.796	1
ADCY8	17p-Del	0.796	1
C16orf78	17q-Amp	0.796	1
C16orf78	1p-Del	0.796	1
C9orf171	1p-Del	0.796	1
CXorf23	17q-Amp	0.796	1
CXorf23	1p-Del	0.796	1
IMPA2	17q-Amp	0.796	1
IMPA2	1p-Del	0.796	1
INPP5E	1p-Del	0.796	1
KIF16B	17q-Amp	0.796	1
KIF16B	1p-Del	0.796	1
OR10G3	17q-Amp	0.796	1
OR10G3	1p-Del	0.796	1
PHF10	17q-Amp	0.796	1
SCYL1	17q-Amp	0.796	1
SCYL1	1p-Del	0.796	1
SLC14A1	1p-Del	0.796	1
SLC1A7	17q-Amp	0.796	1
SLC1A7	1p-Del	0.796	1
SPATA13	1p-Del	0.796	1
VCL	17q-Amp	0.796	1
VCL	1p-Del	0.796	1
Amp_3q26.32	Del_4q34.3	0.797	1
PIK3CA	14q-Del	0.798	1
16q-Amp	Del_11q21	0.798	1
ADAM28	Del_8p23.2	0.799	1
C9orf171	Del_8p23.2	0.799	1
CXorf23	Del_8p23.2	0.799	1
OR10G3	Del_8p23.2	0.799	1
PHF10	Del_8p23.2	0.799	1
RAI1	Del_3p26.3	0.799	1
SCYL1	Del_8p23.2	0.799	1
SLC14A1	Del_8p23.2	0.799	1
SLC1A7	Del_8p23.2	0.799	1
SPATA13	Del_8p23.2	0.799	1
VCL	Del_8p23.2	0.799	1
ADCY8	Del_3p21.2	0.8	1
DPCR1	10q-Del	0.8	1
EGFR	Amp_2q32.1	0.8	1
EGFR	Amp_19p13.2	0.8	1
KDELR3	Amp_2q32.1	0.8	1
KDELR3	Amp_19p13.2	0.8	1
PRKAG2	Amp_2q32.1	0.8	1
STAM	Amp_2q32.1	0.8	1
STAM	Amp_19p13.2	0.8	1
ZNF598	12q-Amp	0.8	1
ADCY8	ATM	0.801	1
ADCY8	NEFH	0.801	1
ADCY8	NF2	0.801	1
ADCY8	8p-Del	0.801	1
CDKN2A	20p-Amp	0.801	1
CDKN2A	20q-Amp	0.801	1
CSGALNACT2	MET	0.801	1
ECHDC2	20p-Amp	0.801	1
ECHDC2	20q-Amp	0.801	1
EDIL3	20p-Amp	0.801	1
EDIL3	20q-Amp	0.801	1
FZR1	20p-Amp	0.801	1
FZR1	20q-Amp	0.801	1
HNRNPM	PIK3CA	0.801	1
HSPA2	20p-Amp	0.801	1
HSPA2	20q-Amp	0.801	1
KLK10	20p-Amp	0.801	1
KLK10	20q-Amp	0.801	1
KRAS	20p-Amp	0.801	1
KRAS	20q-Amp	0.801	1
MYF6	20p-Amp	0.801	1
MYF6	20q-Amp	0.801	1
NF2	ZFYVE26	0.801	1
PTEN	7p-Amp	0.801	1
ZFYVE26	16q-Amp	0.801	1
ADAM28	16p-Amp	0.802	1
ADAM28	10q-Del	0.802	1
C16orf78	16p-Amp	0.802	1
C16orf78	10q-Del	0.802	1
C9orf171	10q-Del	0.802	1
CXorf23	16p-Amp	0.802	1
CXorf23	10q-Del	0.802	1
IMPA2	16p-Amp	0.802	1
IMPA2	10q-Del	0.802	1
INPP5E	10q-Del	0.802	1
KDELR3	Amp_5q35.1	0.802	1
KIF16B	16p-Amp	0.802	1
KIF16B	10q-Del	0.802	1
MTOR	MUC5B	0.802	1
OR10G3	16p-Amp	0.802	1
OR10G3	10q-Del	0.802	1
PHF10	16p-Amp	0.802	1
SCYL1	16p-Amp	0.802	1
SCYL1	10q-Del	0.802	1
SLC14A1	10q-Del	0.802	1
SLC1A7	16p-Amp	0.802	1
SPATA13	16p-Amp	0.802	1
SPATA13	10q-Del	0.802	1
STAM	Amp_5q35.1	0.802	1
ZNF598	ZNF814	0.802	1
Amp_5q35.1	Amp_Xp22.2	0.802	1
5q-Amp	Amp_3q26.32	0.803	1
ARAP3	FAM18B2	0.804	1
ARHGAP33	FAM18B2	0.804	1
ATM	Del_13q12.13	0.804	1
CSK	FAM18B2	0.804	1
CSK	TP53	0.804	1
CYP4F11	Amp_7q31.2	0.804	1
EMG1	FAM18B2	0.804	1
FAM160B2	FAM18B2	0.804	1
FAM18B2	STXBP3	0.804	1
FAM18B2	Amp_Xq11.2	0.804	1
FGFR3	Amp_7q31.2	0.804	1
RIMBP3	Amp_7q31.2	0.804	1
SLC6A14	Amp_7q31.2	0.804	1
STXBP3	TP53	0.804	1
TP53	ZNF532	0.804	1
TP53	Amp_Xq11.2	0.804	1
CYP4F11	KDM5C	0.805	1
CYP4F11	SYNE1	0.805	1
CYP4F11	3q-Amp	0.805	1
CYP4F11	Del_4q34.3	0.805	1
FGFR3	KDM5C	0.805	1
FGFR3	Del_4q34.3	0.805	1
GALNT7	Del_11q23.1	0.805	1
GPR50	KDM5C	0.805	1
GPR50	SYNE1	0.805	1
GPR50	Del_4q34.3	0.805	1
KDM5C	NTRK3	0.805	1
KDM5C	PLXDC2	0.805	1
KDM5C	RIMBP3	0.805	1
KDM5C	SLC6A14	0.805	1
KDM5C	ZNF521	0.805	1
NUDT11	SYNE1	0.805	1
NUDT11	3q-Amp	0.805	1
NUDT11	Del_4q34.3	0.805	1
PLXDC2	SYNE1	0.805	1
PLXDC2	Del_4q34.3	0.805	1
PTCH1	Del_11q23.1	0.805	1
RIMBP3	SYNE1	0.805	1
RIMBP3	3q-Amp	0.805	1
RIMBP3	Del_4q34.3	0.805	1
SLC6A14	Del_4q34.3	0.805	1
SMARCB1	Del_11q23.1	0.805	1
SYNE1	TDG	0.805	1
SYNE1	ZNF521	0.805	1
TDG	Del_4q34.3	0.805	1
ZNF521	3q-Amp	0.805	1
ZNF521	Del_4q34.3	0.805	1
Amp_Xp11.4	Del_11q23.1	0.805	1
ADCY8	Del_1q43	0.806	1
ADCY8	Del_13q14.2	0.806	1
ARAP3	PBRM1	0.806	1
ARHGAP33	PBRM1	0.806	1
ATM	Del_3p21.2	0.806	1
EMG1	PBRM1	0.806	1
FAM160B2	PBRM1	0.806	1
KDM6A	9q-Del	0.806	1
NF1	STAG2	0.806	1
NF1	9q-Del	0.806	1
NFE2L2	STAG2	0.806	1
NFE2L2	9q-Del	0.806	1
PBRM1	ZNF532	0.806	1
PBRM1	Amp_Xq11.2	0.806	1
STAG2	Del_19p13.3	0.806	1
ADAM28	Del_2q37.3	0.807	1
C16orf78	Del_2q37.3	0.807	1
C9orf171	Del_2q37.3	0.807	1
CXorf23	Del_2q37.3	0.807	1
ENO1	Del_3p14.1	0.807	1
FZR1	Del_3p14.1	0.807	1
IMPA2	Del_2q37.3	0.807	1
INPP5E	Del_2q37.3	0.807	1
KIF16B	Del_2q37.3	0.807	1
MYF6	Del_3p14.1	0.807	1
OR10G3	Del_2q37.3	0.807	1
SCYL1	Del_2q37.3	0.807	1
SLC14A1	Del_2q37.3	0.807	1
SPATA13	Del_2q37.3	0.807	1
VCL	Del_2q37.3	0.807	1
EGFR	3p-Amp	0.808	1
PRKAG2	3p-Amp	0.808	1
STAM	3p-Amp	0.808	1
3p-Amp	Amp_Xp22.2	0.808	1
ARAP3	3q-Del	0.809	1
CSK	3q-Del	0.809	1
DPCR1	Del_2q37.3	0.809	1
EMG1	3q-Del	0.809	1
FAM160B2	3q-Del	0.809	1
STXBP3	3q-Del	0.809	1
ZNF532	3q-Del	0.809	1
18q-Del	Amp_2q32.1	0.809	1
18q-Del	Amp_19p13.2	0.809	1
3q-Del	Amp_Xq11.2	0.809	1
ATM	Del_9p21.3	0.81	1
NF1	Del_6q26	0.81	1
NF2	17p-Amp	0.81	1
CSGALNACT2	Del_11q21	0.811	1
DPCR1	Del_11q21	0.811	1
STAG2	6p-Del	0.811	1
SYNE1	1q-Del	0.811	1
VHL	5q-Amp	0.811	1
1q-Del	Del_4q34.3	0.811	1
KDELR3	Del_1p31.1	0.812	1
KDM6A	9p-Del	0.812	1
MTOR	6q-Del	0.812	1
NF1	12p-Amp	0.812	1
NF1	9p-Del	0.812	1
NFE2L2	12p-Amp	0.812	1
NFE2L2	9p-Del	0.812	1
PRKAG2	3p-Del	0.812	1
PRKAG2	Del_1p31.1	0.812	1
STAM	Del_1p31.1	0.812	1
ZFYVE26	Del_9p23	0.812	1
12p-Amp	Del_19p13.3	0.812	1
5q-Amp	14q-Del	0.812	1
CYP4F11	7q-Amp	0.813	1
FGFR3	7q-Amp	0.813	1
RIMBP3	7q-Amp	0.813	1
SLC6A14	7q-Amp	0.813	1
SMARCA4	TP53	0.814	1
ADAM28	Del_13q12.13	0.815	1
C16orf78	Del_13q12.13	0.815	1
C9orf171	Del_13q12.13	0.815	1
CXorf23	Del_13q12.13	0.815	1
EGFR	2q-Amp	0.815	1
INPP5E	Del_13q12.13	0.815	1
KDELR3	2q-Amp	0.815	1
KIF16B	Del_13q12.13	0.815	1
OR10G3	Del_13q12.13	0.815	1
PRKAG2	2q-Amp	0.815	1
SCYL1	Del_13q12.13	0.815	1
SLC14A1	Del_13q12.13	0.815	1
SLC1A7	Del_13q12.13	0.815	1
SPATA13	Del_13q12.13	0.815	1
STAM	2q-Amp	0.815	1
VCL	Del_13q12.13	0.815	1
CYP4F11	7p-Amp	0.816	1
FGFR3	7p-Amp	0.816	1
RIMBP3	7p-Amp	0.816	1
SLC6A14	7p-Amp	0.816	1
5p-Amp	3p-Del	0.816	1
ATM	17p-Del	0.817	1
ADAM28	17p-Amp	0.818	1
ADAM28	Del_9p21.3	0.818	1
C16orf78	17p-Amp	0.818	1
C9orf171	Del_9p21.3	0.818	1
CXorf23	17p-Amp	0.818	1
CXorf23	Del_9p21.3	0.818	1
IMPA2	17p-Amp	0.818	1
IMPA2	Del_9p21.3	0.818	1
INPP5E	Del_9p21.3	0.818	1
KDM6A	ZNF814	0.818	1
KDM6A	Del_16q23.3	0.818	1
KIF16B	17p-Amp	0.818	1
KIF16B	Del_9p21.3	0.818	1
NF1	ZNF814	0.818	1
NFE2L2	ZNF814	0.818	1
OR10G3	17p-Amp	0.818	1
OR10G3	Del_9p21.3	0.818	1
PHF10	17p-Amp	0.818	1
PHF10	Del_9p21.3	0.818	1
SCYL1	17p-Amp	0.818	1
SLC14A1	Del_9p21.3	0.818	1
SLC1A7	17p-Amp	0.818	1
SLC1A7	Del_9p21.3	0.818	1
SPATA13	Del_9p21.3	0.818	1
STAG2	Amp_3q26.32	0.818	1
VCL	17p-Amp	0.818	1
18q-Del	3p-Del	0.818	1
Amp_5q35.1	Del_4q34.3	0.818	1
ARAP3	MTOR	0.819	1
ARHGAP33	MTOR	0.819	1
CSK	MTOR	0.819	1
CSK	MUC5B	0.819	1
EMG1	MTOR	0.819	1
EMG1	MUC5B	0.819	1
FAM160B2	MUC5B	0.819	1
FAM18B2	SYNE1	0.819	1
KDELR3	14q-Del	0.819	1
MTOR	STXBP3	0.819	1
MTOR	ZNF532	0.819	1
MTOR	Amp_Xq11.2	0.819	1
MUC5B	STXBP3	0.819	1
MUC5B	ZNF532	0.819	1
MUC5B	Del_9p21.3	0.819	1
ZNF598	20p-Amp	0.819	1
ZNF598	20q-Amp	0.819	1
14q-Del	Amp_Xp22.2	0.819	1
GALNT7	Del_10q23.31	0.82	1
PTCH1	Del_10q23.31	0.82	1
RAI1	Del_3p12.2	0.82	1
RAI1	Del_10q23.31	0.82	1
SYNE1	6p-Del	0.82	1
Amp_Xp11.4	Del_3p12.2	0.82	1
Amp_Xp11.4	Del_10q23.31	0.82	1
ADAM28	17p-Del	0.821	1
ATM	CSGALNACT2	0.821	1
C16orf78	17p-Del	0.821	1
C9orf171	17p-Del	0.821	1
CDKN2A	18q-Del	0.821	1
CSGALNACT2	NF2	0.821	1
CXorf23	17p-Del	0.821	1
DPCR1	NEFH	0.821	1
DPCR1	NF2	0.821	1
ECHDC2	18q-Del	0.821	1
EDIL3	18q-Del	0.821	1
FZR1	18q-Del	0.821	1
INPP5E	17p-Del	0.821	1
KIF16B	17p-Del	0.821	1
KLK10	18q-Del	0.821	1
KRAS	18q-Del	0.821	1
MTOR	NF2	0.821	1
MUC5B	NF2	0.821	1
MYF6	18q-Del	0.821	1
OR10G3	17p-Del	0.821	1
PRODH	18q-Del	0.821	1
SCYL1	17p-Del	0.821	1
SLC14A1	17p-Del	0.821	1
SLC1A7	17p-Del	0.821	1
SPATA13	17p-Del	0.821	1
VCL	17p-Del	0.821	1
18q-Del	Xp-Del	0.821	1
STAG2	Del_8p23.2	0.822	1
ATM	8p-Del	0.823	1
DPCR1	Del_13q12.13	0.823	1
GALNT7	MET	0.823	1
MET	PTCH1	0.823	1
MET	RAI1	0.823	1
MET	SMARCB1	0.823	1
MET	Amp_Xp11.4	0.823	1
NF1	21q-Del	0.823	1
ZFYVE26	Amp_7q31.2	0.823	1
ADAM28	16q-Amp	0.824	1
ADAM28	8p-Del	0.824	1
ADCY8	STAG2	0.824	1
C16orf78	16q-Amp	0.824	1
C16orf78	8p-Del	0.824	1
C9orf171	8p-Del	0.824	1
CXorf23	16q-Amp	0.824	1
CXorf23	8p-Del	0.824	1
CYP4F11	PTEN	0.824	1
FGFR3	PTEN	0.824	1
GPR50	PTEN	0.824	1
IMPA2	16q-Amp	0.824	1
KIF16B	16q-Amp	0.824	1
NUDT11	PTEN	0.824	1
OR10G3	16q-Amp	0.824	1
OR10G3	8p-Del	0.824	1
PHF10	16q-Amp	0.824	1
PHF10	8p-Del	0.824	1
PTEN	RIMBP3	0.824	1
PTEN	TDG	0.824	1
SCYL1	16q-Amp	0.824	1
SCYL1	8p-Del	0.824	1
SLC14A1	8p-Del	0.824	1
SLC1A7	16q-Amp	0.824	1
SLC1A7	8p-Del	0.824	1
SPATA13	16q-Amp	0.824	1
SPATA13	8p-Del	0.824	1
STAG2	ZFYVE26	0.824	1
VCL	8p-Del	0.824	1
7p-Amp	18p-Del	0.824	1
KDM5C	MET	0.825	1
14q-Del	Del_11q21	0.825	1
6q-Del	Del_3p21.2	0.825	1
ADAM28	Del_1q43	0.826	1
ADAM28	Del_13q14.2	0.826	1
C16orf78	Del_1q43	0.826	1
C16orf78	Del_13q14.2	0.826	1
C9orf171	Del_1q43	0.826	1
C9orf171	Del_13q14.2	0.826	1
CXorf23	Del_1q43	0.826	1
CXorf23	Del_13q14.2	0.826	1
IMPA2	Del_1q43	0.826	1
INPP5E	Del_1q43	0.826	1
INPP5E	Del_13q14.2	0.826	1
KIF16B	Del_1q43	0.826	1
KIF16B	Del_13q14.2	0.826	1
OR10G3	Del_1q43	0.826	1
OR10G3	Del_13q14.2	0.826	1
PIK3CA	18q-Del	0.826	1
SCYL1	Del_1q43	0.826	1
SCYL1	Del_13q14.2	0.826	1
SETD2	Del_1p36.31	0.826	1
SLC14A1	Del_1q43	0.826	1
SLC14A1	Del_13q14.2	0.826	1
SLC1A7	Del_1q43	0.826	1
SLC1A7	Del_13q14.2	0.826	1
SMARCA4	3p-Del	0.826	1
SPATA13	Del_1q43	0.826	1
SPATA13	Del_13q14.2	0.826	1
VCL	Del_1q43	0.826	1
VCL	Del_13q14.2	0.826	1
Del_3p14.1	Del_11q21	0.826	1
ADCY8	5p-Amp	0.827	1
ADCY8	5q-Amp	0.827	1
ADCY8	Del_3p26.3	0.827	1
CSGALNACT2	Del_9p21.3	0.827	1
DPCR1	17p-Amp	0.827	1
DPCR1	Del_9p21.3	0.827	1
FGFR3	Del_6q26	0.827	1
NTRK3	Del_6q26	0.827	1
PTEN	Del_11q23.1	0.827	1
RIMBP3	Del_6q26	0.827	1
SETD2	ZFYVE26	0.827	1
SLC6A14	Del_6q26	0.827	1
ZNF521	Del_6q26	0.827	1
18p-Del	Amp_2q32.1	0.827	1
18p-Del	Amp_19p13.2	0.827	1
GALNT7	6p-Del	0.828	1
SMARCB1	6p-Del	0.828	1
STAG2	16p-Amp	0.828	1
ADAM28	Del_9p23	0.829	1
ATM	Del_1q43	0.829	1
ATM	Del_13q14.2	0.829	1
C9orf171	Del_9p23	0.829	1
CDKN2A	18p-Del	0.829	1
CXorf23	Del_9p23	0.829	1
ECHDC2	18p-Del	0.829	1
EDIL3	18p-Del	0.829	1
FZR1	18p-Del	0.829	1
INPP5E	Del_9p23	0.829	1
KIF16B	Del_9p23	0.829	1
KLK10	18p-Del	0.829	1
KRAS	18p-Del	0.829	1
MYF6	18p-Del	0.829	1
NF1	Del_6q22.31	0.829	1
NFE2L2	12q-Amp	0.829	1
OR10G3	Del_9p23	0.829	1
PHF10	Del_9p23	0.829	1
PRODH	18p-Del	0.829	1
SLC14A1	Del_9p23	0.829	1
SLC1A7	Del_9p23	0.829	1
SPATA13	Del_9p23	0.829	1
12q-Amp	Del_19p13.3	0.829	1
18p-Del	Xp-Del	0.829	1
CYP4F11	Amp_2q32.1	0.83	1
CYP4F11	Amp_19p13.2	0.83	1
ENO1	3p-Del	0.83	1
FGFR3	Amp_2q32.1	0.83	1
FGFR3	Amp_19p13.2	0.83	1
FZR1	3p-Del	0.83	1
KLK10	3p-Del	0.83	1
MYF6	3p-Del	0.83	1
NTRK3	Amp_2q32.1	0.83	1
NTRK3	Amp_19p13.2	0.83	1
NUDT11	Amp_2q32.1	0.83	1
NUDT11	Amp_19p13.2	0.83	1
PLXDC2	Amp_2q32.1	0.83	1
RIMBP3	Amp_2q32.1	0.83	1
RIMBP3	Amp_19p13.2	0.83	1
SLC6A14	Amp_2q32.1	0.83	1
SYNE1	3p-Del	0.83	1
TDG	Amp_2q32.1	0.83	1
ZNF521	Amp_2q32.1	0.83	1
ZNF521	Amp_19p13.2	0.83	1
ZNF814	Del_10q23.31	0.83	1
3q-Del	Del_4q34.3	0.83	1
CSGALNACT2	SMARCA4	0.831	1
DPCR1	SMARCA4	0.831	1
EGFR	Del_11q23.1	0.831	1
HNRNPM	KDM6A	0.831	1
HNRNPM	NF1	0.831	1
HNRNPM	NFE2L2	0.831	1
HNRNPM	Del_19p13.3	0.831	1
KDM6A	PIK3CA	0.831	1
NF1	PIK3CA	0.831	1
NFE2L2	PIK3CA	0.831	1
PIK3CA	Del_19p13.3	0.831	1
SYNE1	Amp_7q31.2	0.831	1
Amp_Xp22.2	Del_11q23.1	0.831	1
DPCR1	17p-Del	0.832	1
GALNT7	Del_11q21	0.832	1
PTCH1	17q-Amp	0.832	1
PTCH1	Del_11q21	0.832	1
RAI1	17q-Amp	0.832	1
RAI1	1p-Del	0.832	1
RAI1	Del_11q21	0.832	1
SMARCB1	Del_11q21	0.832	1
5p-Amp	Del_11q21	0.832	1
5q-Amp	Del_11q21	0.832	1
Amp_Xp11.4	Del_11q21	0.832	1
CARKD	Amp_7q31.2	0.833	1
DPYSL4	Amp_7q31.2	0.833	1
F2RL1	Amp_7q31.2	0.833	1
FAM18B2	STAG2	0.833	1
IFNB1	Amp_7q31.2	0.833	1
KCNK1	Amp_7q31.2	0.833	1
NF1	Del_1p36.31	0.833	1
NFE2L2	Del_1p36.31	0.833	1
ONECUT2	Amp_7q31.2	0.833	1
PDLIM4	Amp_7q31.2	0.833	1
PRDX5	Amp_7q31.2	0.833	1
RALB	Amp_7q31.2	0.833	1
RIN1	Amp_7q31.2	0.833	1
RNF113B	Amp_7q31.2	0.833	1
RNF144A	Amp_7q31.2	0.833	1
STAG2	TP53	0.833	1
TMEM47	Amp_7q31.2	0.833	1
ZNHIT1	Amp_7q31.2	0.833	1
ZFYVE26	7q-Amp	0.834	1
20p-Amp	9p-Del	0.834	1
20q-Amp	9p-Del	0.834	1
ADCY8	Del_16q23.3	0.835	1
ATM	Del_9p23	0.835	1
ZFYVE26	ZNF814	0.835	1
ZFYVE26	Del_16q23.3	0.835	1
Del_4q34.3	Del_8p23.2	0.835	1
DPCR1	8p-Del	0.836	1
PTCH1	Del_8p23.2	0.836	1
RAI1	Del_8p23.2	0.836	1
ADAM28	SETD2	0.837	1
ADAM28	5p-Amp	0.837	1
ADAM28	5q-Amp	0.837	1
ADCY8	1q-Del	0.837	1
C16orf78	SETD2	0.837	1
C9orf171	SETD2	0.837	1
C9orf171	5p-Amp	0.837	1
C9orf171	5q-Amp	0.837	1
CXorf23	SETD2	0.837	1
CXorf23	5p-Amp	0.837	1
CXorf23	5q-Amp	0.837	1
CYP4F11	3p-Amp	0.837	1
INPP5E	SETD2	0.837	1
INPP5E	5p-Amp	0.837	1
INPP5E	5q-Amp	0.837	1
KDM6A	Del_14q31.1	0.837	1
KIF16B	SETD2	0.837	1
KIF16B	5p-Amp	0.837	1
KIF16B	5q-Amp	0.837	1
MTOR	Del_14q31.1	0.837	1
NFE2L2	Del_14q31.1	0.837	1
NUDT11	3p-Amp	0.837	1
OR10G3	SETD2	0.837	1
OR10G3	5p-Amp	0.837	1
OR10G3	5q-Amp	0.837	1
PBRM1	PTCH1	0.837	1
PHF10	SETD2	0.837	1
PHF10	5p-Amp	0.837	1
PHF10	5q-Amp	0.837	1
RIMBP3	3p-Amp	0.837	1
SCYL1	SETD2	0.837	1
SCYL1	5p-Amp	0.837	1
SCYL1	5q-Amp	0.837	1
SETD2	SLC1A7	0.837	1
SETD2	SPATA13	0.837	1
SETD2	VCL	0.837	1
SPATA13	5p-Amp	0.837	1
SPATA13	5q-Amp	0.837	1
VCL	5p-Amp	0.837	1
VCL	5q-Amp	0.837	1
ZFYVE26	7p-Amp	0.837	1
ZFYVE26	9q-Del	0.837	1
ZNF521	3p-Amp	0.837	1
CARKD	7q-Amp	0.838	1
DPYSL4	7q-Amp	0.838	1
F2RL1	7q-Amp	0.838	1
IFNB1	7q-Amp	0.838	1
KCNK1	7q-Amp	0.838	1
ONECUT2	7q-Amp	0.838	1
PDLIM4	7q-Amp	0.838	1
PRDX5	7q-Amp	0.838	1
RALB	7q-Amp	0.838	1
RIN1	7q-Amp	0.838	1
RNF113B	7q-Amp	0.838	1
RNF144A	7q-Amp	0.838	1
SETD2	Del_10q23.31	0.838	1
TMEM47	7q-Amp	0.838	1
ZNF814	Amp_3q26.32	0.838	1
ZNHIT1	7q-Amp	0.838	1
Amp_19p13.2	Del_11q23.1	0.838	1
CARKD	7p-Amp	0.839	1
DPYSL4	7p-Amp	0.839	1
EGFR	6q-Del	0.839	1
F2RL1	7p-Amp	0.839	1
IFNB1	7p-Amp	0.839	1
KCNK1	7p-Amp	0.839	1
MTOR	SMARCA4	0.839	1
NDUFA3	7p-Amp	0.839	1
ONECUT2	7p-Amp	0.839	1
PDLIM4	7p-Amp	0.839	1
PIK3CA	18p-Del	0.839	1
PRDX5	7p-Amp	0.839	1
PRKAG2	6q-Del	0.839	1
RALB	7p-Amp	0.839	1
RIN1	7p-Amp	0.839	1
RNF113B	7p-Amp	0.839	1
RNF144A	7p-Amp	0.839	1
TMEM47	7p-Amp	0.839	1
ZNHIT1	7p-Amp	0.839	1
ARAP3	KDM5C	0.84	1
ARAP3	SYNE1	0.84	1
ARAP3	3q-Amp	0.84	1
ARHGAP33	KDM5C	0.84	1
ARHGAP33	SYNE1	0.84	1
ATM	Del_3p26.3	0.84	1
CSK	KDM5C	0.84	1
CSK	SYNE1	0.84	1
CSK	3q-Amp	0.84	1
CSK	Del_4q34.3	0.84	1
EMG1	KDM5C	0.84	1
EMG1	SYNE1	0.84	1
EMG1	3q-Amp	0.84	1
EMG1	Del_4q34.3	0.84	1
FAM160B2	SYNE1	0.84	1
FAM160B2	3q-Amp	0.84	1
FAM160B2	Del_4q34.3	0.84	1
GALNT7	16p-Amp	0.84	1
GALNT7	10q-Del	0.84	1
KDM5C	STXBP3	0.84	1
KDM5C	ZNF532	0.84	1
KDM5C	Amp_Xq11.2	0.84	1
PTCH1	10q-Del	0.84	1
RAI1	16p-Amp	0.84	1
RAI1	10q-Del	0.84	1
STXBP3	SYNE1	0.84	1
STXBP3	Del_4q34.3	0.84	1
SYNE1	ZNF532	0.84	1
SYNE1	Amp_Xq11.2	0.84	1
ZNF532	3q-Amp	0.84	1
ZNF532	Del_4q34.3	0.84	1
3q-Amp	Amp_Xq11.2	0.84	1
10q-Del	Amp_Xp11.4	0.84	1
Amp_Xq11.2	Del_4q34.3	0.84	1
ATM	PTCH1	0.841	1
ATM	Amp_Xp11.4	0.841	1
DPCR1	Del_1q43	0.841	1
DPCR1	Del_13q14.2	0.841	1
ECHDC2	Amp_3q26.32	0.841	1
ENO1	Amp_3q26.32	0.841	1
FGFR3	Del_6q22.31	0.841	1
FZR1	Amp_3q26.32	0.841	1
GALNT7	NEFH	0.841	1
GALNT7	NF2	0.841	1
HSPA2	Amp_3q26.32	0.841	1
KDM5C	Del_11q21	0.841	1
KLK10	Amp_3q26.32	0.841	1
KRAS	Amp_3q26.32	0.841	1
MYF6	Amp_3q26.32	0.841	1
NEFH	PTCH1	0.841	1
NEFH	RAI1	0.841	1
NEFH	SMARCB1	0.841	1
NEFH	Amp_Xp11.4	0.841	1
NF2	RAI1	0.841	1
NF2	Amp_Xp11.4	0.841	1
NTRK3	Del_6q22.31	0.841	1
PRODH	Amp_3q26.32	0.841	1
RIMBP3	Del_6q22.31	0.841	1
SLC6A14	Del_6q22.31	0.841	1
ZNF521	Del_6q22.31	0.841	1
2q-Amp	18q-Del	0.841	1
Xp-Del	Amp_3q26.32	0.841	1
Amp_19p13.2	Del_9p23	0.841	1
DPCR1	STAG2	0.842	1
KDM5C	10q-Del	0.842	1
NUDT11	VHL	0.842	1
SYNE1	10q-Del	0.842	1
VHL	ZNF521	0.842	1
ZFYVE26	12p-Amp	0.842	1
ZFYVE26	9p-Del	0.842	1
14q-Del	1q-Del	0.842	1
ADAM28	1q-Del	0.843	1
ADAM28	9q-Del	0.843	1
C16orf78	1q-Del	0.843	1
C16orf78	9q-Del	0.843	1
C9orf171	1q-Del	0.843	1
C9orf171	9q-Del	0.843	1
CXorf23	1q-Del	0.843	1
CXorf23	9q-Del	0.843	1
IMPA2	1q-Del	0.843	1
IMPA2	9q-Del	0.843	1
INPP5E	1q-Del	0.843	1
INPP5E	9q-Del	0.843	1
KIF16B	1q-Del	0.843	1
OR10G3	1q-Del	0.843	1
OR10G3	9q-Del	0.843	1
PHF10	9q-Del	0.843	1
SCYL1	1q-Del	0.843	1
SCYL1	9q-Del	0.843	1
SLC14A1	1q-Del	0.843	1
SLC14A1	9q-Del	0.843	1
SLC1A7	1q-Del	0.843	1
SLC1A7	9q-Del	0.843	1
SPATA13	1q-Del	0.843	1
SPATA13	9q-Del	0.843	1
VCL	1q-Del	0.843	1
VCL	9q-Del	0.843	1
CYP4F11	2q-Amp	0.844	1
CYP4F11	Del_1p36.31	0.844	1
FGFR3	2q-Amp	0.844	1
GPR50	Del_1p36.31	0.844	1
KDM6A	ZNF598	0.844	1
NF1	ZNF598	0.844	1
NFE2L2	ZNF598	0.844	1
NTRK3	2q-Amp	0.844	1
NUDT11	2q-Amp	0.844	1
PLXDC2	2q-Amp	0.844	1
RIMBP3	2q-Amp	0.844	1
RIMBP3	Del_1p36.31	0.844	1
SLC6A14	2q-Amp	0.844	1
SLC6A14	Del_1p36.31	0.844	1
TDG	2q-Amp	0.844	1
ZNF521	2q-Amp	0.844	1
ZNF598	Del_19p13.3	0.844	1
ZNF814	1p-Del	0.844	1
17q-Amp	Del_16q23.3	0.844	1
CARKD	Del_6q26	0.845	1
CDCA8	Del_6q26	0.845	1
CSGALNACT2	Del_9p23	0.845	1
DPCR1	Del_9p23	0.845	1
DPYSL4	Del_6q26	0.845	1
F2RL1	Del_6q26	0.845	1
FLCN	Del_6q26	0.845	1
IFNB1	Del_6q26	0.845	1
NDUFA3	Del_6q26	0.845	1
NEK8	Del_6q26	0.845	1
NF1	20p-Amp	0.845	1
NF1	20q-Amp	0.845	1
NKX2-1	Del_6q26	0.845	1
ONECUT2	Del_6q26	0.845	1
PDLIM4	Del_6q26	0.845	1
PRDX5	Del_6q26	0.845	1
RALB	Del_6q26	0.845	1
RCN1	Del_6q26	0.845	1
RIN1	Del_6q26	0.845	1
RNF113B	Del_6q26	0.845	1
RNF144A	Del_6q26	0.845	1
TMEM47	Del_6q26	0.845	1
ZNHIT1	Del_6q26	0.845	1
ADAM28	12p-Amp	0.846	1
ADAM28	9p-Del	0.846	1
ADCY8	13q-Del	0.846	1
C9orf171	12p-Amp	0.846	1
C9orf171	9p-Del	0.846	1
CXorf23	12p-Amp	0.846	1
CXorf23	9p-Del	0.846	1
IMPA2	12p-Amp	0.846	1
IMPA2	9p-Del	0.846	1
INPP5E	9p-Del	0.846	1
KIF16B	12p-Amp	0.846	1
KIF16B	9p-Del	0.846	1
OR10G3	12p-Amp	0.846	1
OR10G3	9p-Del	0.846	1
PHF10	12p-Amp	0.846	1
PHF10	9p-Del	0.846	1
SCYL1	12p-Amp	0.846	1
SLC14A1	9p-Del	0.846	1
SLC1A7	9p-Del	0.846	1
SPATA13	12p-Amp	0.846	1
SPATA13	9p-Del	0.846	1
VCL	12p-Amp	0.846	1
Amp_17q25.2	Del_11q21	0.846	1
ADCY8	PIK3CA	0.847	1
CYP4F11	Del_14q31.1	0.847	1
EGFR	MET	0.847	1
GALNT7	Del_2q37.3	0.847	1
HNRNPM	ZFYVE26	0.847	1
KDELR3	MET	0.847	1
MET	PRKAG2	0.847	1
MET	STAM	0.847	1
MET	Amp_Xp22.2	0.847	1
PIK3CA	ZFYVE26	0.847	1
SMARCB1	Del_2q37.3	0.847	1
Amp_Xp11.4	Del_2q37.3	0.847	1
Del_8p23.2	Del_11q23.1	0.847	1
SYNE1	7q-Amp	0.848	1
VHL	Del_8p23.2	0.848	1
ADAM28	13q-Del	0.849	1
C16orf78	13q-Del	0.849	1
C9orf171	13q-Del	0.849	1
CDKN2A	TP53	0.849	1
CXorf23	13q-Del	0.849	1
ECHDC2	FAM18B2	0.849	1
ECHDC2	TP53	0.849	1
EDIL3	FAM18B2	0.849	1
EDIL3	TP53	0.849	1
ENO1	FAM18B2	0.849	1
FAM18B2	FZR1	0.849	1
FAM18B2	HSPA2	0.849	1
FAM18B2	KLK10	0.849	1
FAM18B2	MYF6	0.849	1
FAM18B2	PRODH	0.849	1
FAM18B2	Xp-Del	0.849	1
FZR1	TP53	0.849	1
HSPA2	TP53	0.849	1
INPP5E	13q-Del	0.849	1
KIF16B	13q-Del	0.849	1
KLK10	TP53	0.849	1
KRAS	TP53	0.849	1
MYF6	TP53	0.849	1
OR10G3	13q-Del	0.849	1
SCYL1	13q-Del	0.849	1
SLC14A1	13q-Del	0.849	1
SLC1A7	13q-Del	0.849	1
SPATA13	13q-Del	0.849	1
VCL	13q-Del	0.849	1
5q-Amp	9p-Del	0.849	1
ZNF598	Amp_17q25.2	0.85	1
20p-Amp	Del_9p21.3	0.85	1
20q-Amp	Del_9p21.3	0.85	1
ADAM28	21q-Del	0.851	1
ADCY8	21q-Del	0.851	1
ADCY8	Del_6q26	0.851	1
C16orf78	21q-Del	0.851	1
C9orf171	21q-Del	0.851	1
CXorf23	21q-Del	0.851	1
GALNT7	SMARCA4	0.851	1
IMPA2	21q-Del	0.851	1
KIF16B	21q-Del	0.851	1
MTOR	Del_4q34.3	0.851	1
MUC5B	SYNE1	0.851	1
MUC5B	Del_4q34.3	0.851	1
OR10G3	21q-Del	0.851	1
PHF10	21q-Del	0.851	1
PTCH1	SMARCA4	0.851	1
RAI1	SMARCA4	0.851	1
SCYL1	21q-Del	0.851	1
SMARCA4	SMARCB1	0.851	1
SMARCA4	Amp_Xp11.4	0.851	1
SPATA13	21q-Del	0.851	1
VCL	21q-Del	0.851	1
2q-Amp	Del_9p21.3	0.851	1
CSGALNACT2	ZNF814	0.852	1
DPCR1	ZNF814	0.852	1
DPCR1	Del_16q23.3	0.852	1
FAM18B2	Del_16q23.3	0.852	1
MUC5B	Del_9p23	0.852	1
NF2	14q-Del	0.852	1
TP53	ZNF814	0.852	1
TP53	16p-Amp	0.852	1
21q-Del	Amp_3q26.32	0.852	1
ATM	SETD2	0.853	1
CARKD	Del_6q22.31	0.853	1
CDCA8	Del_6q22.31	0.853	1
CDKN2A	3q-Del	0.853	1
DPYSL4	Del_6q22.31	0.853	1
EDIL3	3q-Del	0.853	1
F2RL1	Del_6q22.31	0.853	1
FLCN	Del_6q22.31	0.853	1
FZR1	3q-Del	0.853	1
HSPA2	3q-Del	0.853	1
IFNB1	Del_6q22.31	0.853	1
KLK10	3q-Del	0.853	1
KRAS	3q-Del	0.853	1
MYF6	3q-Del	0.853	1
NDUFA3	Del_6q22.31	0.853	1
NEFH	5p-Amp	0.853	1
NEFH	5q-Amp	0.853	1
NEK8	Del_6q22.31	0.853	1
NKX2-1	Del_6q22.31	0.853	1
ONECUT2	Del_6q22.31	0.853	1
PDLIM4	Del_6q22.31	0.853	1
PRDX5	Del_6q22.31	0.853	1
PRODH	3q-Del	0.853	1
RALB	Del_6q22.31	0.853	1
RCN1	Del_6q22.31	0.853	1
RIN1	Del_6q22.31	0.853	1
RNF113B	Del_6q22.31	0.853	1
RNF144A	Del_6q22.31	0.853	1
TMEM47	Del_6q22.31	0.853	1
ZNHIT1	Del_6q22.31	0.853	1
3q-Del	Xp-Del	0.853	1
ADAM28	12q-Amp	0.854	1
C9orf171	12q-Amp	0.854	1
CXorf23	12q-Amp	0.854	1
IMPA2	12q-Amp	0.854	1
KIF16B	12q-Amp	0.854	1
MET	PTEN	0.854	1
OR10G3	12q-Amp	0.854	1
PHF10	12q-Amp	0.854	1
SCYL1	12q-Amp	0.854	1
SLC1A7	12q-Amp	0.854	1
SPATA13	12q-Amp	0.854	1
STAG2	Del_13q12.13	0.854	1
VCL	12q-Amp	0.854	1
ZNF814	10q-Del	0.854	1
CARKD	Del_1p36.31	0.855	1
CDCA8	Del_1p36.31	0.855	1
DPYSL4	Del_1p36.31	0.855	1
EGFR	Del_11q21	0.855	1
F2RL1	Del_1p36.31	0.855	1
FLCN	Del_1p36.31	0.855	1
GPR50	Amp_5q35.1	0.855	1
IFNB1	Del_1p36.31	0.855	1
KCNK1	Del_1p36.31	0.855	1
KDELR3	Del_11q21	0.855	1
NEK8	Del_1p36.31	0.855	1
NKX2-1	Del_1p36.31	0.855	1
ONECUT2	Del_1p36.31	0.855	1
PDLIM4	Del_1p36.31	0.855	1
PRDX5	Del_1p36.31	0.855	1
PRKAG2	Del_11q21	0.855	1
RALB	Del_1p36.31	0.855	1
RIN1	Del_1p36.31	0.855	1
RNF113B	Del_1p36.31	0.855	1
RNF144A	Del_1p36.31	0.855	1
SLC6A14	Amp_5q35.1	0.855	1
STAM	Del_11q21	0.855	1
TMEM47	Del_1p36.31	0.855	1
ZNF521	Amp_5q35.1	0.855	1
ZNHIT1	Del_1p36.31	0.855	1
18q-Del	Del_8p23.2	0.855	1
Amp_Xp22.2	Del_11q21	0.855	1
ATM	3q-Amp	0.856	1
ATM	Del_4q34.3	0.856	1
CDCA8	Del_14q31.1	0.856	1
DPYSL4	Del_14q31.1	0.856	1
F2RL1	Del_14q31.1	0.856	1
FLCN	Del_14q31.1	0.856	1
KCNK1	Del_14q31.1	0.856	1
MTOR	STAG2	0.856	1
NDUFA3	Del_14q31.1	0.856	1
NEFH	SYNE1	0.856	1
NEK8	Del_14q31.1	0.856	1
NKX2-1	Del_14q31.1	0.856	1
ONECUT2	Del_14q31.1	0.856	1
PDLIM4	Del_14q31.1	0.856	1
PRDX5	Del_14q31.1	0.856	1
RALB	Del_14q31.1	0.856	1
RCN1	Del_14q31.1	0.856	1
RIN1	Del_14q31.1	0.856	1
RNF113B	Del_14q31.1	0.856	1
TMEM47	Del_14q31.1	0.856	1
ZFYVE26	12q-Amp	0.856	1
ZNHIT1	Del_14q31.1	0.856	1
Del_2q37.3	Del_4q34.3	0.856	1
ARAP3	PTEN	0.857	1
CSK	PTEN	0.857	1
CYP4F11	Del_11q23.1	0.857	1
FAM160B2	PTEN	0.857	1
NTRK3	Del_11q23.1	0.857	1
NUDT11	Del_11q23.1	0.857	1
PLXDC2	Del_11q23.1	0.857	1
PTEN	STXBP3	0.857	1
PTEN	ZNF532	0.857	1
PTEN	Amp_Xq11.2	0.857	1
SLC6A14	Del_11q23.1	0.857	1
TDG	Del_11q23.1	0.857	1
ZNF521	Del_11q23.1	0.857	1
2q-Amp	18p-Del	0.857	1
18q-Del	Amp_17q25.2	0.857	1
CSGALNACT2	5p-Amp	0.858	1
CSGALNACT2	5q-Amp	0.858	1
HNRNPM	Amp_3q26.32	0.858	1
KDM6A	NF1	0.858	1
KDM6A	Del_19p13.3	0.858	1
NFE2L2	Del_19p13.3	0.858	1
PIK3CA	Amp_3q26.32	0.858	1
STXBP3	Del_3p21.2	0.858	1
Amp_Xq11.2	Del_3p21.2	0.858	1
ADCY8	ZNF598	0.859	1
NF1	Del_1p31.1	0.859	1
NFE2L2	Del_1p31.1	0.859	1
RAI1	Del_13q12.13	0.859	1
STAG2	Del_9p21.3	0.859	1
ZFYVE26	ZNF598	0.859	1
Amp_Xp11.4	Del_13q12.13	0.859	1
GALNT7	STAG2	0.86	1
PTCH1	STAG2	0.86	1
RAI1	STAG2	0.86	1
SMARCB1	STAG2	0.86	1
STAG2	Amp_Xp11.4	0.86	1
3q-Del	Del_8p23.2	0.86	1
CARKD	Amp_5q35.1	0.861	1
CDCA8	Amp_5q35.1	0.861	1
CDKN2A	MTOR	0.861	1
CDKN2A	MUC5B	0.861	1
CYP4F11	Del_3p14.1	0.861	1
DPYSL4	Amp_5q35.1	0.861	1
ECHDC2	MTOR	0.861	1
ECHDC2	MUC5B	0.861	1
EDIL3	MTOR	0.861	1
EDIL3	MUC5B	0.861	1
ENO1	MTOR	0.861	1
F2RL1	Amp_5q35.1	0.861	1
FLCN	Amp_5q35.1	0.861	1
FZR1	MTOR	0.861	1
FZR1	MUC5B	0.861	1
GPR50	Del_3p14.1	0.861	1
HSPA2	MTOR	0.861	1
HSPA2	MUC5B	0.861	1
KCNK1	Amp_5q35.1	0.861	1
KLK10	MTOR	0.861	1
KLK10	MUC5B	0.861	1
KRAS	MTOR	0.861	1
KRAS	MUC5B	0.861	1
MTOR	MYF6	0.861	1
MTOR	PRODH	0.861	1
MTOR	18q-Del	0.861	1
MTOR	Xp-Del	0.861	1
MUC5B	Xp-Del	0.861	1
NDUFA3	Amp_5q35.1	0.861	1
NKX2-1	Amp_5q35.1	0.861	1
PRDX5	Amp_5q35.1	0.861	1
RALB	Amp_5q35.1	0.861	1
RCN1	Amp_5q35.1	0.861	1
RIN1	Amp_5q35.1	0.861	1
RNF113B	Amp_5q35.1	0.861	1
RNF144A	Amp_5q35.1	0.861	1
TMEM47	Amp_5q35.1	0.861	1
ZNF521	Del_3p14.1	0.861	1
ZNHIT1	Amp_5q35.1	0.861	1
ARAP3	Amp_19p13.2	0.862	1
ARHGAP33	Amp_2q32.1	0.862	1
ARHGAP33	Amp_19p13.2	0.862	1
CSK	Amp_2q32.1	0.862	1
CSK	Amp_19p13.2	0.862	1
EMG1	Amp_2q32.1	0.862	1
EMG1	Amp_19p13.2	0.862	1
FAM160B2	Amp_2q32.1	0.862	1
FAM160B2	Amp_19p13.2	0.862	1
GALNT7	Del_9p21.3	0.862	1
PTCH1	17p-Amp	0.862	1
PTCH1	Del_9p21.3	0.862	1
RAI1	17p-Amp	0.862	1
RAI1	Del_9p21.3	0.862	1
SMARCB1	Del_9p21.3	0.862	1
STXBP3	Amp_19p13.2	0.862	1
ZNF532	Amp_2q32.1	0.862	1
ZNF532	Amp_19p13.2	0.862	1
17p-Amp	Amp_Xp11.4	0.862	1
5p-Amp	Amp_2q32.1	0.862	1
5q-Amp	Amp_2q32.1	0.862	1
Amp_19p13.2	Amp_Xq11.2	0.862	1
Amp_Xp22.2	Del_10q23.31	0.862	1
ADAM28	20p-Amp	0.863	1
ADAM28	20q-Amp	0.863	1
ATM	EGFR	0.863	1
ATM	PRKAG2	0.863	1
ATM	Amp_Xp22.2	0.863	1
CSGALNACT2	HNRNPM	0.863	1
CSGALNACT2	PIK3CA	0.863	1
CXorf23	20p-Amp	0.863	1
CXorf23	20q-Amp	0.863	1
CYP4F11	Del_1p31.1	0.863	1
DPCR1	HNRNPM	0.863	1
DPCR1	PIK3CA	0.863	1
EGFR	NEFH	0.863	1
EGFR	NF2	0.863	1
GPR50	Del_1p31.1	0.863	1
INPP5E	20p-Amp	0.863	1
INPP5E	20q-Amp	0.863	1
KDELR3	NEFH	0.863	1
KDELR3	NF2	0.863	1
KIF16B	20p-Amp	0.863	1
KIF16B	20q-Amp	0.863	1
NEFH	PRKAG2	0.863	1
NEFH	STAM	0.863	1
NEFH	Amp_Xp22.2	0.863	1
NF2	PRKAG2	0.863	1
NF2	Amp_Xp22.2	0.863	1
OR10G3	20p-Amp	0.863	1
OR10G3	20q-Amp	0.863	1
PHF10	20p-Amp	0.863	1
PHF10	20q-Amp	0.863	1
RIMBP3	Del_1p31.1	0.863	1
SCYL1	20p-Amp	0.863	1
SCYL1	20q-Amp	0.863	1
SPATA13	20p-Amp	0.863	1
SPATA13	20q-Amp	0.863	1
VCL	20p-Amp	0.863	1
VCL	20q-Amp	0.863	1
ATM	9q-Del	0.864	1
MET	Amp_19p13.2	0.864	1
MTOR	Del_3p12.2	0.864	1
NF2	1q-Del	0.864	1
STAG2	17p-Del	0.864	1
CARKD	Del_1p31.1	0.865	1
CDCA8	Del_1p31.1	0.865	1
DPYSL4	Del_1p31.1	0.865	1
EGFR	Del_3p21.2	0.865	1
F2RL1	Del_1p31.1	0.865	1
FLCN	Del_1p31.1	0.865	1
IFNB1	Del_1p31.1	0.865	1
KCNK1	Del_1p31.1	0.865	1
NDUFA3	Del_1p31.1	0.865	1
NEK8	Del_1p31.1	0.865	1
NKX2-1	Del_1p31.1	0.865	1
ONECUT2	Del_1p31.1	0.865	1
PDLIM4	Del_1p31.1	0.865	1
PRDX5	Del_1p31.1	0.865	1
PRKAG2	Del_3p21.2	0.865	1
RALB	Del_1p31.1	0.865	1
RIN1	Del_1p31.1	0.865	1
RNF113B	Del_1p31.1	0.865	1
RNF144A	Del_1p31.1	0.865	1
SETD2	18q-Del	0.865	1
TMEM47	Del_1p31.1	0.865	1
ZNHIT1	Del_1p31.1	0.865	1
5p-Amp	18q-Del	0.865	1
CSGALNACT2	9q-Del	0.866	1
DPCR1	1q-Del	0.866	1
DPCR1	9q-Del	0.866	1
DPCR1	Amp_7q31.2	0.866	1
IMPA2	Del_3p21.2	0.866	1
INPP5E	Del_3p21.2	0.866	1
KDM6A	14q-Del	0.866	1
NFE2L2	14q-Del	0.866	1
OR10G3	Del_3p21.2	0.866	1
RAI1	17p-Del	0.866	1
SETD2	Del_3p12.2	0.866	1
SPATA13	Del_3p21.2	0.866	1
17p-Del	Amp_Xp11.4	0.866	1
ADCY8	Del_6q22.31	0.867	1
ARAP3	3p-Amp	0.867	1
CSK	3p-Amp	0.867	1
EMG1	3p-Amp	0.867	1
FAM160B2	3p-Amp	0.867	1
ZNF532	3p-Amp	0.867	1
3p-Amp	Amp_Xq11.2	0.867	1
CDCA8	14q-Del	0.868	1
CYP4F11	14q-Del	0.868	1
DPYSL4	14q-Del	0.868	1
F2RL1	14q-Del	0.868	1
FLCN	14q-Del	0.868	1
KCNK1	14q-Del	0.868	1
NDUFA3	14q-Del	0.868	1
NEK8	14q-Del	0.868	1
NKX2-1	14q-Del	0.868	1
ONECUT2	14q-Del	0.868	1
PDLIM4	14q-Del	0.868	1
PRDX5	14q-Del	0.868	1
PTEN	Del_11q21	0.868	1
RALB	14q-Del	0.868	1
RCN1	14q-Del	0.868	1
RIN1	14q-Del	0.868	1
RNF113B	14q-Del	0.868	1
SYNE1	Del_3p14.1	0.868	1
TMEM47	14q-Del	0.868	1
ZNHIT1	14q-Del	0.868	1
ARAP3	Amp_7q31.2	0.869	1
ARHGAP33	Amp_7q31.2	0.869	1
EMG1	Amp_7q31.2	0.869	1
FAM160B2	Amp_7q31.2	0.869	1
GALNT7	ZNF814	0.869	1
PTCH1	ZNF814	0.869	1
PTCH1	Del_16q23.3	0.869	1
RAI1	ZNF814	0.869	1
RAI1	Del_16q23.3	0.869	1
SMARCB1	ZNF814	0.869	1
STAG2	16q-Amp	0.869	1
SYNE1	20p-Amp	0.869	1
SYNE1	20q-Amp	0.869	1
ZNF814	Amp_Xp11.4	0.869	1
Amp_7q31.2	Amp_Xq11.2	0.869	1
Amp_Xp11.4	Del_16q23.3	0.869	1
ATM	12p-Amp	0.87	1
ATM	9p-Del	0.87	1
CSGALNACT2	9p-Del	0.87	1
DPCR1	12p-Amp	0.87	1
DPCR1	9p-Del	0.87	1
KDM5C	SMARCA4	0.87	1
PTCH1	8p-Del	0.87	1
RAI1	16q-Amp	0.87	1
RAI1	8p-Del	0.87	1
SMARCA4	SYNE1	0.87	1
SMARCA4	3q-Amp	0.87	1
SMARCA4	Del_4q34.3	0.87	1
ZFYVE26	20p-Amp	0.87	1
ZFYVE26	20q-Amp	0.87	1
16q-Amp	Amp_Xp11.4	0.87	1
1q-Del	Del_9p21.3	0.87	1
ADCY8	KDM6A	0.871	1
ADCY8	NF1	0.871	1
ADCY8	NFE2L2	0.871	1
ADCY8	Del_19p13.3	0.871	1
CYP4F11	MET	0.871	1
EGFR	SMARCA4	0.871	1
FGFR3	MET	0.871	1
GPR50	MET	0.871	1
KDELR3	SMARCA4	0.871	1
KDELR3	1p-Del	0.871	1
KDM6A	ZFYVE26	0.871	1
MET	NTRK3	0.871	1
MET	NUDT11	0.871	1
MET	PLXDC2	0.871	1
MET	RIMBP3	0.871	1
MET	SLC6A14	0.871	1
MET	TDG	0.871	1
MET	ZNF521	0.871	1
NF1	ZFYVE26	0.871	1
NFE2L2	ZFYVE26	0.871	1
PRKAG2	SMARCA4	0.871	1
SMARCA4	STAM	0.871	1
SMARCA4	Amp_Xp22.2	0.871	1
STAM	1p-Del	0.871	1
ZFYVE26	Del_19p13.3	0.871	1
ADCY8	Del_14q31.1	0.873	1
ARHGAP33	2q-Amp	0.873	1
CSK	2q-Amp	0.873	1
EMG1	2q-Amp	0.873	1
FAM160B2	2q-Amp	0.873	1
MUC5B	ZNF814	0.873	1
PTCH1	Del_1q43	0.873	1
RAI1	Del_1q43	0.873	1
RAI1	Del_13q14.2	0.873	1
SMARCA4	5p-Amp	0.873	1
SMARCA4	5q-Amp	0.873	1
STXBP3	Del_3p26.3	0.873	1
ZNF532	2q-Amp	0.873	1
Amp_Xp11.4	Del_13q14.2	0.873	1
Amp_Xq11.2	Del_3p26.3	0.873	1
CARKD	Amp_17q25.2	0.874	1
CDCA8	Amp_17q25.2	0.874	1
CSGALNACT2	ZNF598	0.874	1
DPCR1	ZNF598	0.874	1
DPCR1	13q-Del	0.874	1
DPYSL4	Amp_17q25.2	0.874	1
F2RL1	Amp_17q25.2	0.874	1
FLCN	Amp_17q25.2	0.874	1
IFNB1	Amp_17q25.2	0.874	1
KCNK1	Amp_17q25.2	0.874	1
NDUFA3	Amp_17q25.2	0.874	1
NEK8	Amp_17q25.2	0.874	1
ONECUT2	Amp_17q25.2	0.874	1
PDLIM4	Amp_17q25.2	0.874	1
PRDX5	Amp_17q25.2	0.874	1
RALB	Amp_17q25.2	0.874	1
RCN1	Amp_17q25.2	0.874	1
RIN1	Amp_17q25.2	0.874	1
RNF113B	Amp_17q25.2	0.874	1
RNF144A	Amp_17q25.2	0.874	1
STAG2	Del_13q14.2	0.874	1
STAM	Del_8p23.2	0.874	1
TMEM47	Amp_17q25.2	0.874	1
ZNHIT1	Amp_17q25.2	0.874	1
ARAP3	7q-Amp	0.875	1
ARHGAP33	7q-Amp	0.875	1
DPCR1	7q-Amp	0.875	1
EMG1	7q-Amp	0.875	1
FAM160B2	7q-Amp	0.875	1
MTOR	SETD2	0.875	1
MUC5B	5p-Amp	0.875	1
MUC5B	5q-Amp	0.875	1
SYNE1	Del_6q26	0.875	1
5q-Amp	Del_3p14.1	0.875	1
7q-Amp	Amp_Xq11.2	0.875	1
7q-Amp	18q-Del	0.876	1
1p-Del	Del_9p21.3	0.876	1
3p-Del	Del_11q23.1	0.876	1
Amp_19p13.2	Del_11q21	0.876	1
ADAM28	18q-Del	0.877	1
ARAP3	7p-Amp	0.877	1
ARHGAP33	7p-Amp	0.877	1
C16orf78	Del_3p26.3	0.877	1
C9orf171	18q-Del	0.877	1
CARKD	6q-Del	0.877	1
CDCA8	6q-Del	0.877	1
CXorf23	18q-Del	0.877	1
CYP4F11	Del_11q21	0.877	1
DPYSL4	6q-Del	0.877	1
EMG1	7p-Amp	0.877	1
F2RL1	6q-Del	0.877	1
FAM160B2	7p-Amp	0.877	1
FGFR3	Del_11q21	0.877	1
FLCN	6q-Del	0.877	1
GALNT7	Del_9p23	0.877	1
IFNB1	6q-Del	0.877	1
IMPA2	18q-Del	0.877	1
IMPA2	Del_3p26.3	0.877	1
INPP5E	18q-Del	0.877	1
INPP5E	Del_3p26.3	0.877	1
KDELR3	16p-Amp	0.877	1
NDUFA3	6q-Del	0.877	1
NEK8	6q-Del	0.877	1
NKX2-1	6q-Del	0.877	1
NTRK3	Del_11q21	0.877	1
NUDT11	Del_11q21	0.877	1
ONECUT2	6q-Del	0.877	1
OR10G3	18q-Del	0.877	1
OR10G3	Del_3p26.3	0.877	1
PDLIM4	6q-Del	0.877	1
PHF10	18q-Del	0.877	1
PIK3CA	3q-Del	0.877	1
PLXDC2	Del_11q21	0.877	1
PRDX5	6q-Del	0.877	1
PTCH1	Del_9p23	0.877	1
RAI1	Del_9p23	0.877	1
RALB	6q-Del	0.877	1
RCN1	6q-Del	0.877	1
RIMBP3	Del_11q21	0.877	1
RIN1	6q-Del	0.877	1
RNF113B	6q-Del	0.877	1
RNF144A	6q-Del	0.877	1
SLC14A1	18q-Del	0.877	1
SLC1A7	18q-Del	0.877	1
SLC6A14	Del_11q21	0.877	1
SMARCB1	Del_9p23	0.877	1
TDG	Del_11q21	0.877	1
TMEM47	6q-Del	0.877	1
VCL	18q-Del	0.877	1
ZNF521	Del_11q21	0.877	1
ZNHIT1	6q-Del	0.877	1
7p-Amp	Amp_Xq11.2	0.877	1
10q-Del	Amp_Xp22.2	0.877	1
CDKN2A	KDM5C	0.878	1
CDKN2A	SYNE1	0.878	1
CDKN2A	3q-Amp	0.878	1
DPCR1	7p-Amp	0.878	1
ECHDC2	KDM5C	0.878	1
ECHDC2	SYNE1	0.878	1
ECHDC2	3q-Amp	0.878	1
ECHDC2	Del_4q34.3	0.878	1
EDIL3	KDM5C	0.878	1
EDIL3	3q-Amp	0.878	1
EDIL3	Del_4q34.3	0.878	1
ENO1	3q-Amp	0.878	1
ENO1	Del_3p12.2	0.878	1
ENO1	Del_4q34.3	0.878	1
FZR1	KDM5C	0.878	1
FZR1	3q-Amp	0.878	1
FZR1	Del_3p12.2	0.878	1
FZR1	Del_4q34.3	0.878	1
HSPA2	KDM5C	0.878	1
HSPA2	SYNE1	0.878	1
HSPA2	3q-Amp	0.878	1
HSPA2	Del_4q34.3	0.878	1
KDM5C	KLK10	0.878	1
KDM5C	KRAS	0.878	1
KDM5C	MYF6	0.878	1
KDM5C	PRODH	0.878	1
KDM5C	Xp-Del	0.878	1
KLK10	SYNE1	0.878	1
KLK10	3q-Amp	0.878	1
KLK10	Del_4q34.3	0.878	1
KRAS	SYNE1	0.878	1
KRAS	3q-Amp	0.878	1
KRAS	Del_4q34.3	0.878	1
MYF6	SYNE1	0.878	1
MYF6	3q-Amp	0.878	1
MYF6	Del_4q34.3	0.878	1
PRODH	SYNE1	0.878	1
SYNE1	Xp-Del	0.878	1
ZNF598	Amp_3q26.32	0.878	1
3q-Amp	Xp-Del	0.878	1
Xp-Del	Del_4q34.3	0.878	1
EGFR	STAG2	0.879	1
GALNT7	HNRNPM	0.879	1
GALNT7	PIK3CA	0.879	1
GALNT7	VHL	0.879	1
GPR50	Amp_17q25.2	0.879	1
HNRNPM	PTCH1	0.879	1
HNRNPM	RAI1	0.879	1
HNRNPM	16p-Amp	0.879	1
HNRNPM	Amp_Xp11.4	0.879	1
KDELR3	STAG2	0.879	1
MTOR	18p-Del	0.879	1
MUC5B	18p-Del	0.879	1
NUDT11	Amp_17q25.2	0.879	1
PIK3CA	PTCH1	0.879	1
PIK3CA	RAI1	0.879	1
PIK3CA	SMARCB1	0.879	1
PIK3CA	Amp_Xp11.4	0.879	1
STAG2	STAM	0.879	1
STAG2	Amp_Xp22.2	0.879	1
ZNF521	Amp_17q25.2	0.879	1
KDM6A	Amp_17q25.2	0.88	1
NFE2L2	Amp_17q25.2	0.88	1
ATM	21q-Del	0.881	1
VHL	5p-Amp	0.881	1
18p-Del	Del_8p23.2	0.881	1
Del_3p14.1	Del_19p13.3	0.881	1
ADAM28	18p-Del	0.882	1
ADCY8	Amp_5q35.1	0.882	1
C9orf171	18p-Del	0.882	1
CXorf23	18p-Del	0.882	1
EGFR	Del_3p26.3	0.882	1
IMPA2	18p-Del	0.882	1
INPP5E	18p-Del	0.882	1
KDM6A	18p-Del	0.882	1
MET	1p-Del	0.882	1
OR10G3	18p-Del	0.882	1
PHF10	18p-Del	0.882	1
PRKAG2	Del_3p26.3	0.882	1
SLC14A1	18p-Del	0.882	1
SLC1A7	18p-Del	0.882	1
VCL	18p-Del	0.882	1
ZFYVE26	Amp_5q35.1	0.882	1
9p-Del	Amp_2q32.1	0.882	1
9p-Del	Amp_19p13.2	0.882	1
ADCY8	ZFYVE26	0.883	1
DPCR1	12q-Amp	0.883	1
EGFR	Del_2q37.3	0.883	1
SETD2	10q-Del	0.883	1
STAG2	Amp_5q35.1	0.883	1
ARAP3	Del_11q23.1	0.884	1
ARHGAP33	Del_11q23.1	0.884	1
ATM	CYP4F11	0.884	1
ATM	FGFR3	0.884	1
ATM	GPR50	0.884	1
ATM	NUDT11	0.884	1
ATM	PLXDC2	0.884	1
ATM	SLC6A14	0.884	1
ATM	TDG	0.884	1
ATM	ZNF521	0.884	1
CSGALNACT2	NF1	0.884	1
CSGALNACT2	NFE2L2	0.884	1
CSGALNACT2	Del_19p13.3	0.884	1
CSK	Del_11q23.1	0.884	1
CYP4F11	NEFH	0.884	1
CYP4F11	NF2	0.884	1
DPCR1	KDM6A	0.884	1
DPCR1	NF1	0.884	1
DPCR1	NFE2L2	0.884	1
DPCR1	Del_19p13.3	0.884	1
EMG1	Del_11q23.1	0.884	1
FAM160B2	Del_11q23.1	0.884	1
FGFR3	NEFH	0.884	1
FGFR3	NF2	0.884	1
FGFR3	6q-Del	0.884	1
GPR50	NEFH	0.884	1
GPR50	NF2	0.884	1
GPR50	3p-Del	0.884	1
GPR50	6q-Del	0.884	1
NEFH	NTRK3	0.884	1
NEFH	NUDT11	0.884	1
NEFH	PLXDC2	0.884	1
NEFH	RIMBP3	0.884	1
NEFH	SLC6A14	0.884	1
NEFH	TDG	0.884	1
NEFH	ZNF521	0.884	1
NF2	NTRK3	0.884	1
NF2	PLXDC2	0.884	1
NF2	RIMBP3	0.884	1
NF2	SLC6A14	0.884	1
NF2	TDG	0.884	1
NF2	ZNF521	0.884	1
NTRK3	6q-Del	0.884	1
PLXDC2	3p-Del	0.884	1
RIMBP3	3p-Del	0.884	1
RIMBP3	6q-Del	0.884	1
SLC6A14	6q-Del	0.884	1
STXBP3	Del_11q23.1	0.884	1
TP53	12q-Amp	0.884	1
ZNF521	3p-Del	0.884	1
ZNF521	6q-Del	0.884	1
ZNF532	Del_11q23.1	0.884	1
Amp_Xq11.2	Del_11q23.1	0.884	1
CSK	Del_6q26	0.885	1
STXBP3	Del_6q26	0.885	1
ZNF532	Del_6q26	0.885	1
20p-Amp	Del_9p23	0.885	1
20q-Amp	Del_9p23	0.885	1
Del_2q37.3	Del_3p12.2	0.885	1
20p-Amp	Del_11q21	0.886	1
20q-Amp	Del_11q21	0.886	1
Del_3p21.2	Del_19p13.3	0.886	1
EGFR	ZNF814	0.887	1
EGFR	Del_16q23.3	0.887	1
KDELR3	ZNF814	0.887	1
NF1	6q-Del	0.887	1
PBRM1	14q-Del	0.887	1
PRKAG2	ZNF814	0.887	1
PRKAG2	Del_16q23.3	0.887	1
RAI1	SETD2	0.887	1
RAI1	5p-Amp	0.887	1
SETD2	Amp_Xp11.4	0.887	1
SMARCB1	5p-Amp	0.887	1
SMARCB1	5q-Amp	0.887	1
STAM	ZNF814	0.887	1
STAM	Del_16q23.3	0.887	1
ZNF814	Amp_Xp22.2	0.887	1
5p-Amp	Amp_Xp11.4	0.887	1
5q-Amp	Amp_Xp11.4	0.887	1
Amp_Xp22.2	Del_16q23.3	0.887	1
Del_1p36.31	Del_3p12.2	0.887	1
CARKD	Del_10q23.31	0.888	1
CDCA8	Del_10q23.31	0.888	1
F2RL1	Del_10q23.31	0.888	1
FLCN	Del_10q23.31	0.888	1
HSPA2	PBRM1	0.888	1
IFNB1	Del_10q23.31	0.888	1
KCNK1	Del_10q23.31	0.888	1
NDUFA3	Del_10q23.31	0.888	1
NEFH	Amp_2q32.1	0.888	1
NEFH	Amp_19p13.2	0.888	1
NEK8	Del_10q23.31	0.888	1
NKX2-1	Del_10q23.31	0.888	1
ONECUT2	Del_10q23.31	0.888	1
PBRM1	PRODH	0.888	1
PBRM1	Xp-Del	0.888	1
PDLIM4	Del_10q23.31	0.888	1
PRDX5	Del_10q23.31	0.888	1
RALB	Del_10q23.31	0.888	1
RIN1	Del_10q23.31	0.888	1
RNF113B	Del_10q23.31	0.888	1
TMEM47	Del_10q23.31	0.888	1
ZNHIT1	Del_10q23.31	0.888	1
16p-Amp	18p-Del	0.888	1
17p-Del	Del_4q34.3	0.888	1
GALNT7	ZNF598	0.889	1
HNRNPM	MTOR	0.889	1
HNRNPM	MUC5B	0.889	1
NEFH	Amp_7q31.2	0.889	1
PTCH1	ZNF598	0.889	1
RAI1	ZNF598	0.889	1
SMARCB1	ZNF598	0.889	1
ZNF598	Amp_Xp11.4	0.889	1
CDKN2A	PTEN	0.89	1
ECHDC2	PTEN	0.89	1
EDIL3	PTEN	0.89	1
ENO1	PTEN	0.89	1
FZR1	PTEN	0.89	1
HSPA2	PTEN	0.89	1
KLK10	PTEN	0.89	1
KRAS	PTEN	0.89	1
MTOR	Del_3p26.3	0.89	1
MYF6	PTEN	0.89	1
PRODH	PTEN	0.89	1
PTEN	Xp-Del	0.89	1
SYNE1	3q-Amp	0.89	1
TP53	Amp_7q31.2	0.89	1
14q-Del	Del_11q23.1	0.89	1
ADAM28	Amp_3q26.32	0.891	1
C16orf78	Amp_3q26.32	0.891	1
C9orf171	Amp_3q26.32	0.891	1
CARKD	6p-Del	0.891	1
CDCA8	6p-Del	0.891	1
CXorf23	Amp_3q26.32	0.891	1
CYP4F11	SMARCA4	0.891	1
DPYSL4	6p-Del	0.891	1
F2RL1	6p-Del	0.891	1
FGFR3	SMARCA4	0.891	1
FLCN	6p-Del	0.891	1
IFNB1	6p-Del	0.891	1
INPP5E	Amp_3q26.32	0.891	1
KCNK1	6p-Del	0.891	1
KIF16B	Amp_3q26.32	0.891	1
NDUFA3	6p-Del	0.891	1
NEK8	6p-Del	0.891	1
NKX2-1	6p-Del	0.891	1
NTRK3	SMARCA4	0.891	1
NUDT11	SMARCA4	0.891	1
ONECUT2	6p-Del	0.891	1
OR10G3	Amp_3q26.32	0.891	1
PDLIM4	6p-Del	0.891	1
PHF10	Amp_3q26.32	0.891	1
PLXDC2	SMARCA4	0.891	1
PRDX5	6p-Del	0.891	1
RALB	6p-Del	0.891	1
RCN1	6p-Del	0.891	1
RIN1	6p-Del	0.891	1
RNF113B	6p-Del	0.891	1
RNF144A	6p-Del	0.891	1
SCYL1	Amp_3q26.32	0.891	1
SLC1A7	Amp_3q26.32	0.891	1
SLC6A14	SMARCA4	0.891	1
SMARCA4	ZNF521	0.891	1
SPATA13	Amp_3q26.32	0.891	1
TMEM47	6p-Del	0.891	1
VCL	Amp_3q26.32	0.891	1
ZNHIT1	6p-Del	0.891	1
CARKD	17q-Amp	0.892	1
CARKD	1p-Del	0.892	1
CDCA8	17q-Amp	0.892	1
CDCA8	1p-Del	0.892	1
DPYSL4	17q-Amp	0.892	1
DPYSL4	1p-Del	0.892	1
F2RL1	17q-Amp	0.892	1
F2RL1	1p-Del	0.892	1
FLCN	17q-Amp	0.892	1
FLCN	1p-Del	0.892	1
IFNB1	17q-Amp	0.892	1
IFNB1	1p-Del	0.892	1
KCNK1	17q-Amp	0.892	1
KCNK1	1p-Del	0.892	1
KDELR3	Del_13q12.13	0.892	1
NDUFA3	17q-Amp	0.892	1
NDUFA3	1p-Del	0.892	1
NEK8	17q-Amp	0.892	1
NEK8	1p-Del	0.892	1
NKX2-1	1p-Del	0.892	1
ONECUT2	17q-Amp	0.892	1
ONECUT2	1p-Del	0.892	1
PDLIM4	17q-Amp	0.892	1
PDLIM4	1p-Del	0.892	1
PRDX5	17q-Amp	0.892	1
PRDX5	1p-Del	0.892	1
PRKAG2	Del_13q12.13	0.892	1
RALB	17q-Amp	0.892	1
RALB	1p-Del	0.892	1
RCN1	17q-Amp	0.892	1
RIN1	17q-Amp	0.892	1
RIN1	1p-Del	0.892	1
RNF113B	17q-Amp	0.892	1
RNF113B	1p-Del	0.892	1
RNF144A	17q-Amp	0.892	1
RNF144A	1p-Del	0.892	1
SETD2	STAG2	0.892	1
TMEM47	17q-Amp	0.892	1
TMEM47	1p-Del	0.892	1
ZNHIT1	17q-Amp	0.892	1
ZNHIT1	1p-Del	0.892	1
Amp_Xp22.2	Del_13q12.13	0.892	1
PTEN	SMARCA4	0.893	1
SMARCA4	Amp_17q25.2	0.893	1
CARKD	Del_8p23.2	0.894	1
CDCA8	Del_8p23.2	0.894	1
DPCR1	20p-Amp	0.894	1
DPCR1	20q-Amp	0.894	1
DPYSL4	Del_8p23.2	0.894	1
F2RL1	Del_8p23.2	0.894	1
FLCN	Del_8p23.2	0.894	1
KCNK1	Del_8p23.2	0.894	1
NDUFA3	Del_8p23.2	0.894	1
NEK8	Del_8p23.2	0.894	1
NKX2-1	Del_8p23.2	0.894	1
ONECUT2	Del_8p23.2	0.894	1
PRDX5	Del_8p23.2	0.894	1
PTCH1	9q-Del	0.894	1
RAI1	1q-Del	0.894	1
RAI1	9q-Del	0.894	1
RCN1	Del_8p23.2	0.894	1
RNF113B	Del_8p23.2	0.894	1
RNF144A	Del_8p23.2	0.894	1
SMARCB1	9q-Del	0.894	1
SYNE1	8p-Del	0.894	1
TMEM47	Del_8p23.2	0.894	1
ZNF598	3q-Del	0.894	1
ZNHIT1	Del_8p23.2	0.894	1
8p-Del	Del_4q34.3	0.894	1
ADCY8	CSGALNACT2	0.895	1
ADCY8	DPCR1	0.895	1
ARAP3	MET	0.895	1
ARHGAP33	MET	0.895	1
CARKD	16p-Amp	0.895	1
CARKD	10q-Del	0.895	1
CDCA8	16p-Amp	0.895	1
CDCA8	10q-Del	0.895	1
CDKN2A	Amp_19p13.2	0.895	1
CSGALNACT2	ZFYVE26	0.895	1
CSK	MET	0.895	1
CSK	Del_6q22.31	0.895	1
DPCR1	ZFYVE26	0.895	1
DPYSL4	16p-Amp	0.895	1
DPYSL4	10q-Del	0.895	1
ECHDC2	Amp_2q32.1	0.895	1
ECHDC2	Amp_19p13.2	0.895	1
EDIL3	Amp_2q32.1	0.895	1
EDIL3	Amp_19p13.2	0.895	1
EGFR	HNRNPM	0.895	1
EMG1	MET	0.895	1
ENO1	Amp_2q32.1	0.895	1
F2RL1	16p-Amp	0.895	1
F2RL1	10q-Del	0.895	1
FLCN	16p-Amp	0.895	1
FLCN	10q-Del	0.895	1
FZR1	Amp_2q32.1	0.895	1
FZR1	Amp_19p13.2	0.895	1
HNRNPM	KDELR3	0.895	1
HNRNPM	PRKAG2	0.895	1
HNRNPM	STAM	0.895	1
HNRNPM	Amp_Xp22.2	0.895	1
HSPA2	Amp_2q32.1	0.895	1
HSPA2	Amp_19p13.2	0.895	1
IFNB1	16p-Amp	0.895	1
IFNB1	10q-Del	0.895	1
KCNK1	16p-Amp	0.895	1
KCNK1	10q-Del	0.895	1
KDELR3	PIK3CA	0.895	1
KDELR3	Del_9p21.3	0.895	1
KLK10	Amp_2q32.1	0.895	1
KLK10	Amp_19p13.2	0.895	1
KRAS	Amp_2q32.1	0.895	1
KRAS	Amp_19p13.2	0.895	1
MET	STXBP3	0.895	1
MET	ZNF532	0.895	1
MET	Amp_Xq11.2	0.895	1
MUC5B	12p-Amp	0.895	1
MUC5B	9p-Del	0.895	1
MYF6	Amp_2q32.1	0.895	1
MYF6	Amp_19p13.2	0.895	1
NDUFA3	16p-Amp	0.895	1
NDUFA3	10q-Del	0.895	1
NEK8	16p-Amp	0.895	1
NEK8	10q-Del	0.895	1
NKX2-1	10q-Del	0.895	1
ONECUT2	16p-Amp	0.895	1
ONECUT2	10q-Del	0.895	1
PBRM1	Del_14q31.1	0.895	1
PDLIM4	16p-Amp	0.895	1
PDLIM4	10q-Del	0.895	1
PIK3CA	PRKAG2	0.895	1
PIK3CA	STAM	0.895	1
PIK3CA	Amp_Xp22.2	0.895	1
PRDX5	16p-Amp	0.895	1
PRDX5	10q-Del	0.895	1
PRODH	Amp_2q32.1	0.895	1
PRODH	Amp_19p13.2	0.895	1
RALB	16p-Amp	0.895	1
RALB	10q-Del	0.895	1
RCN1	16p-Amp	0.895	1
RIN1	16p-Amp	0.895	1
RIN1	10q-Del	0.895	1
RNF113B	16p-Amp	0.895	1
RNF113B	10q-Del	0.895	1
RNF144A	16p-Amp	0.895	1
STAM	Del_9p21.3	0.895	1
STXBP3	Del_6q22.31	0.895	1
TMEM47	16p-Amp	0.895	1
TMEM47	10q-Del	0.895	1
ZNF532	Del_6q22.31	0.895	1
ZNF598	17q-Amp	0.895	1
ZNHIT1	16p-Amp	0.895	1
ZNHIT1	10q-Del	0.895	1
17p-Amp	Amp_Xp22.2	0.895	1
Del_1q43	Del_9p21.3	0.895	1
ATM	3p-Amp	0.896	1
NF1	Amp_3q26.32	0.896	1
NFE2L2	Amp_3q26.32	0.896	1
16q-Amp	Del_11q23.1	0.896	1
8p-Del	9p-Del	0.896	1
8p-Del	Del_11q23.1	0.896	1
Amp_3q26.32	Del_19p13.3	0.896	1
ADAM28	FAM18B2	0.897	1
ADAM28	TP53	0.897	1
ADCY8	14q-Del	0.897	1
ARHGAP33	Del_1p36.31	0.897	1
C16orf78	FAM18B2	0.897	1
C16orf78	TP53	0.897	1
C9orf171	FAM18B2	0.897	1
C9orf171	TP53	0.897	1
CSK	Del_1p36.31	0.897	1
CXorf23	FAM18B2	0.897	1
CXorf23	TP53	0.897	1
FAM18B2	IMPA2	0.897	1
FAM18B2	INPP5E	0.897	1
FAM18B2	KIF16B	0.897	1
FAM18B2	OR10G3	0.897	1
FAM18B2	PHF10	0.897	1
FAM18B2	SCYL1	0.897	1
FAM18B2	SLC1A7	0.897	1
FAM18B2	VCL	0.897	1
IMPA2	TP53	0.897	1
INPP5E	TP53	0.897	1
KIF16B	TP53	0.897	1
OR10G3	TP53	0.897	1
PHF10	TP53	0.897	1
SCYL1	TP53	0.897	1
SLC14A1	TP53	0.897	1
SPATA13	TP53	0.897	1
TP53	VCL	0.897	1
20p-Amp	Amp_5q35.1	0.897	1
20q-Amp	Amp_5q35.1	0.897	1
Amp_5q35.1	Amp_19p13.2	0.897	1
CDCA8	Del_2q37.3	0.898	1
CYP4F11	STAG2	0.898	1
DPYSL4	Del_2q37.3	0.898	1
F2RL1	Del_2q37.3	0.898	1
FLCN	Del_2q37.3	0.898	1
GALNT7	KDM6A	0.898	1
GALNT7	NFE2L2	0.898	1
GALNT7	12p-Amp	0.898	1
GALNT7	9p-Del	0.898	1
GALNT7	Del_19p13.3	0.898	1
GPR50	STAG2	0.898	1
IFNB1	Del_2q37.3	0.898	1
KCNK1	Del_2q37.3	0.898	1
KDELR3	17p-Del	0.898	1
KDM6A	PTCH1	0.898	1
KDM6A	RAI1	0.898	1
KDM6A	SMARCB1	0.898	1
KDM6A	Amp_Xp11.4	0.898	1
NDUFA3	Del_2q37.3	0.898	1
NEK8	Del_2q37.3	0.898	1
NF1	PTCH1	0.898	1
NF1	Amp_Xp11.4	0.898	1
NFE2L2	RAI1	0.898	1
NKX2-1	Del_2q37.3	0.898	1
NTRK3	STAG2	0.898	1
NUDT11	STAG2	0.898	1
ONECUT2	Del_2q37.3	0.898	1
PDLIM4	Del_2q37.3	0.898	1
PLXDC2	STAG2	0.898	1
PRDX5	Del_2q37.3	0.898	1
PTCH1	12p-Amp	0.898	1
PTCH1	9p-Del	0.898	1
PTCH1	Del_19p13.3	0.898	1
RAI1	9p-Del	0.898	1
RALB	Del_2q37.3	0.898	1
RCN1	Del_2q37.3	0.898	1
RIMBP3	STAG2	0.898	1
RNF113B	Del_2q37.3	0.898	1
RNF144A	Del_2q37.3	0.898	1
SMARCB1	9p-Del	0.898	1
STAG2	TDG	0.898	1
STAG2	ZNF521	0.898	1
STAM	17p-Del	0.898	1
TMEM47	Del_2q37.3	0.898	1
ZNHIT1	Del_2q37.3	0.898	1
17p-Del	Amp_Xp22.2	0.898	1
Amp_Xp11.4	Del_19p13.3	0.898	1
CDKN2A	3p-Amp	0.899	1
ECHDC2	3p-Amp	0.899	1
EDIL3	3p-Amp	0.899	1
EMG1	Del_14q31.1	0.899	1
ENO1	3p-Amp	0.899	1
FAM160B2	Del_14q31.1	0.899	1
FZR1	3p-Amp	0.899	1
HSPA2	3p-Amp	0.899	1
KDM5C	ZNF814	0.899	1
KDM5C	Del_16q23.3	0.899	1
KLK10	3p-Amp	0.899	1
KRAS	3p-Amp	0.899	1
MYF6	3p-Amp	0.899	1
NEFH	7q-Amp	0.899	1
SYNE1	Del_6q22.31	0.899	1
ZNF814	3q-Amp	0.899	1
3p-Amp	Xp-Del	0.899	1
3q-Amp	Del_16q23.3	0.899	1
Amp_Xq11.2	Del_14q31.1	0.899	1
ADAM28	3q-Del	0.9	1
C16orf78	3q-Del	0.9	1
C9orf171	3q-Del	0.9	1
CXorf23	3q-Del	0.9	1
IMPA2	3q-Del	0.9	1
INPP5E	3q-Del	0.9	1
MET	Del_11q23.1	0.9	1
OR10G3	3q-Del	0.9	1
PHF10	3q-Del	0.9	1
SCYL1	3q-Del	0.9	1
SLC14A1	3q-Del	0.9	1
SLC1A7	3q-Del	0.9	1
SMARCA4	Amp_2q32.1	0.9	1
SPATA13	3q-Del	0.9	1
VCL	3q-Del	0.9	1
3q-Del	Del_13q12.13	0.9	1
ARAP3	Del_11q21	0.901	1
ARHGAP33	Del_11q21	0.901	1
CSK	Del_11q21	0.901	1
EMG1	Del_11q21	0.901	1
FAM160B2	Del_11q21	0.901	1
GPR50	Del_10q23.31	0.901	1
KDELR3	16q-Amp	0.901	1
NTRK3	Del_10q23.31	0.901	1
RAI1	13q-Del	0.901	1
SLC6A14	Del_10q23.31	0.901	1
STAG2	9q-Del	0.901	1
STAM	8p-Del	0.901	1
STXBP3	Del_11q21	0.901	1
SYNE1	Del_3p21.2	0.901	1
ZNF532	Del_11q21	0.901	1
16q-Amp	Amp_Xp22.2	0.901	1
13q-Del	Amp_Xp11.4	0.901	1
Amp_Xq11.2	Del_11q21	0.901	1
CARKD	Del_13q12.13	0.903	1
CDCA8	Del_13q12.13	0.903	1
CSGALNACT2	Del_1p36.31	0.903	1
DPYSL4	Del_13q12.13	0.903	1
ECHDC2	2q-Amp	0.903	1
EDIL3	2q-Amp	0.903	1
ENO1	2q-Amp	0.903	1
F2RL1	Del_13q12.13	0.903	1
FLCN	Del_13q12.13	0.903	1
FZR1	2q-Amp	0.903	1
HSPA2	2q-Amp	0.903	1
KCNK1	Del_13q12.13	0.903	1
KLK10	2q-Amp	0.903	1
KRAS	2q-Amp	0.903	1
MUC5B	Amp_3q26.32	0.903	1
MYF6	2q-Amp	0.903	1
NEK8	Del_13q12.13	0.903	1
NKX2-1	Del_13q12.13	0.903	1
ONECUT2	Del_13q12.13	0.903	1
PDLIM4	Del_13q12.13	0.903	1
PRDX5	Del_13q12.13	0.903	1
PRODH	2q-Amp	0.903	1
RALB	Del_13q12.13	0.903	1
RCN1	Del_13q12.13	0.903	1
RIN1	Del_13q12.13	0.903	1
RNF113B	Del_13q12.13	0.903	1
RNF144A	Del_13q12.13	0.903	1
TMEM47	Del_13q12.13	0.903	1
VHL	3q-Del	0.903	1
ZNHIT1	Del_13q12.13	0.903	1
1q-Del	Del_9p23	0.903	1
ATM	3p-Del	0.904	1
EGFR	ZNF598	0.904	1
GALNT7	21q-Del	0.904	1
KDELR3	ZNF598	0.904	1
KDELR3	Del_1q43	0.904	1
KDELR3	Del_13q14.2	0.904	1
NEFH	2q-Amp	0.904	1
PRKAG2	ZNF598	0.904	1
PRKAG2	Del_13q14.2	0.904	1
SMARCB1	21q-Del	0.904	1
STAM	ZNF598	0.904	1
STAM	Del_1q43	0.904	1
TP53	7q-Amp	0.904	1
ZNF598	Amp_Xp22.2	0.904	1
Amp_Xp22.2	Del_13q14.2	0.904	1
ADAM28	MTOR	0.905	1
ADAM28	MUC5B	0.905	1
ARAP3	Amp_5q35.1	0.905	1
ARHGAP33	Amp_5q35.1	0.905	1
C16orf78	MTOR	0.905	1
C16orf78	MUC5B	0.905	1
C9orf171	MTOR	0.905	1
C9orf171	MUC5B	0.905	1
CARKD	17p-Amp	0.905	1
CDCA8	17p-Amp	0.905	1
CDCA8	Del_9p21.3	0.905	1
CXorf23	MTOR	0.905	1
CYP4F11	ZNF814	0.905	1
CYP4F11	Del_16q23.3	0.905	1
DPYSL4	17p-Amp	0.905	1
DPYSL4	Del_9p21.3	0.905	1
F2RL1	17p-Amp	0.905	1
F2RL1	Del_9p21.3	0.905	1
FGFR3	ZNF814	0.905	1
FGFR3	Del_16q23.3	0.905	1
FLCN	17p-Amp	0.905	1
FLCN	Del_9p21.3	0.905	1
GPR50	ZNF814	0.905	1
GPR50	Del_16q23.3	0.905	1
IFNB1	17p-Amp	0.905	1
IFNB1	Del_9p21.3	0.905	1
IMPA2	MTOR	0.905	1
IMPA2	MUC5B	0.905	1
INPP5E	MTOR	0.905	1
INPP5E	MUC5B	0.905	1
KCNK1	17p-Amp	0.905	1
KIF16B	MTOR	0.905	1
KIF16B	MUC5B	0.905	1
MTOR	OR10G3	0.905	1
MTOR	PHF10	0.905	1
MTOR	SCYL1	0.905	1
MTOR	SLC14A1	0.905	1
MTOR	SLC1A7	0.905	1
MTOR	SPATA13	0.905	1
MTOR	VCL	0.905	1
MUC5B	OR10G3	0.905	1
MUC5B	PHF10	0.905	1
MUC5B	SCYL1	0.905	1
MUC5B	SLC14A1	0.905	1
MUC5B	SPATA13	0.905	1
MUC5B	VCL	0.905	1
NDUFA3	17p-Amp	0.905	1
NEK8	17p-Amp	0.905	1
NEK8	Del_9p21.3	0.905	1
NKX2-1	Del_9p21.3	0.905	1
NTRK3	ZNF814	0.905	1
NUDT11	ZNF814	0.905	1
NUDT11	Del_16q23.3	0.905	1
ONECUT2	17p-Amp	0.905	1
ONECUT2	Del_9p21.3	0.905	1
PDLIM4	17p-Amp	0.905	1
PDLIM4	Del_9p21.3	0.905	1
PLXDC2	ZNF814	0.905	1
PLXDC2	Del_16q23.3	0.905	1
PRDX5	17p-Amp	0.905	1
PRDX5	Del_9p21.3	0.905	1
PTCH1	Amp_7q31.2	0.905	1
PTEN	STAG2	0.905	1
RALB	17p-Amp	0.905	1
RALB	Del_9p21.3	0.905	1
RCN1	17p-Amp	0.905	1
RIMBP3	ZNF814	0.905	1
RIMBP3	Del_16q23.3	0.905	1
RIN1	17p-Amp	0.905	1
RIN1	Del_9p21.3	0.905	1
RNF113B	17p-Amp	0.905	1
RNF113B	Del_9p21.3	0.905	1
RNF144A	17p-Amp	0.905	1
RNF144A	Del_9p21.3	0.905	1
SLC6A14	ZNF814	0.905	1
SLC6A14	Del_16q23.3	0.905	1
SMARCB1	Amp_7q31.2	0.905	1
STAG2	9p-Del	0.905	1
STXBP3	Amp_5q35.1	0.905	1
TDG	Del_16q23.3	0.905	1
TMEM47	17p-Amp	0.905	1
TMEM47	Del_9p21.3	0.905	1
ZNF521	ZNF814	0.905	1
ZNF521	Del_16q23.3	0.905	1
ZNHIT1	17p-Amp	0.905	1
ZNHIT1	Del_9p21.3	0.905	1
7q-Amp	18p-Del	0.905	1
Del_8p23.2	Del_11q21	0.905	1
ARAP3	ATM	0.906	1
ARAP3	NEFH	0.906	1
ARAP3	NF2	0.906	1
ARHGAP33	NEFH	0.906	1
ARHGAP33	NF2	0.906	1
ATM	CSK	0.906	1
ATM	EMG1	0.906	1
ATM	STXBP3	0.906	1
ATM	ZNF532	0.906	1
ATM	Amp_Xq11.2	0.906	1
CARKD	17p-Del	0.906	1
CDCA8	17p-Del	0.906	1
CSK	NEFH	0.906	1
CSK	NF2	0.906	1
DPYSL4	17p-Del	0.906	1
EMG1	NEFH	0.906	1
EMG1	NF2	0.906	1
F2RL1	17p-Del	0.906	1
FAM160B2	NEFH	0.906	1
FAM160B2	NF2	0.906	1
FAM18B2	KDM6A	0.906	1
FAM18B2	NF1	0.906	1
FGFR3	6p-Del	0.906	1
FLCN	17p-Del	0.906	1
GPR50	6p-Del	0.906	1
IFNB1	17p-Del	0.906	1
KCNK1	17p-Del	0.906	1
NDUFA3	17p-Del	0.906	1
NEFH	STXBP3	0.906	1
NEFH	ZNF532	0.906	1
NEFH	Amp_Xq11.2	0.906	1
NEK8	17p-Del	0.906	1
NF2	STXBP3	0.906	1
NF2	ZNF532	0.906	1
NF2	Amp_Xq11.2	0.906	1
NFE2L2	TP53	0.906	1
NKX2-1	17p-Del	0.906	1
NTRK3	6p-Del	0.906	1
ONECUT2	17p-Del	0.906	1
PDLIM4	17p-Del	0.906	1
PRDX5	17p-Del	0.906	1
RALB	17p-Del	0.906	1
RCN1	17p-Del	0.906	1
RIMBP3	6p-Del	0.906	1
RIN1	17p-Del	0.906	1
RNF113B	17p-Del	0.906	1
RNF144A	17p-Del	0.906	1
TMEM47	17p-Del	0.906	1
TP53	16q-Amp	0.906	1
VHL	ZFYVE26	0.906	1
ZNF598	Amp_7q31.2	0.906	1
ZNHIT1	17p-Del	0.906	1
Amp_17q25.2	Del_11q23.1	0.906	1
ATM	Del_10q23.31	0.907	1
CSGALNACT2	DPCR1	0.907	1
KDELR3	Del_9p23	0.907	1
KDM5C	Del_14q31.1	0.907	1
SMARCA4	3p-Amp	0.907	1
STAM	Del_9p23	0.907	1
SYNE1	Del_14q31.1	0.907	1
ADCY8	GALNT7	0.908	1
ADCY8	PTCH1	0.908	1
ADCY8	RAI1	0.908	1
ADCY8	SMARCB1	0.908	1
ADCY8	Amp_Xp11.4	0.908	1
CARKD	16q-Amp	0.908	1
CARKD	8p-Del	0.908	1
CDCA8	16q-Amp	0.908	1
CDCA8	8p-Del	0.908	1
DPYSL4	16q-Amp	0.908	1
DPYSL4	8p-Del	0.908	1
F2RL1	16q-Amp	0.908	1
F2RL1	8p-Del	0.908	1
FGFR3	17q-Amp	0.908	1
FLCN	16q-Amp	0.908	1
FLCN	8p-Del	0.908	1
GPR50	17q-Amp	0.908	1
GPR50	1p-Del	0.908	1
IFNB1	16q-Amp	0.908	1
KCNK1	16q-Amp	0.908	1
KCNK1	8p-Del	0.908	1
NDUFA3	16q-Amp	0.908	1
NDUFA3	8p-Del	0.908	1
NEK8	16q-Amp	0.908	1
NEK8	8p-Del	0.908	1
NKX2-1	8p-Del	0.908	1
NUDT11	17q-Amp	0.908	1
ONECUT2	16q-Amp	0.908	1
ONECUT2	8p-Del	0.908	1
PDLIM4	16q-Amp	0.908	1
PRDX5	16q-Amp	0.908	1
PRDX5	8p-Del	0.908	1
PTCH1	ZFYVE26	0.908	1
PTCH1	12q-Amp	0.908	1
RAI1	ZFYVE26	0.908	1
RALB	16q-Amp	0.908	1
RCN1	16q-Amp	0.908	1
RCN1	8p-Del	0.908	1
RIN1	16q-Amp	0.908	1
RNF113B	16q-Amp	0.908	1
RNF113B	8p-Del	0.908	1
RNF144A	16q-Amp	0.908	1
RNF144A	8p-Del	0.908	1
SLC6A14	1p-Del	0.908	1
SMARCB1	ZFYVE26	0.908	1
SMARCB1	12q-Amp	0.908	1
TMEM47	16q-Amp	0.908	1
TMEM47	8p-Del	0.908	1
ZFYVE26	Amp_Xp11.4	0.908	1
ZNF521	17q-Amp	0.908	1
ZNHIT1	16q-Amp	0.908	1
ZNHIT1	8p-Del	0.908	1
21q-Del	Amp_17q25.2	0.908	1
CARKD	Del_1q43	0.909	1
CARKD	Del_13q14.2	0.909	1
CDCA8	Del_1q43	0.909	1
CDCA8	Del_13q14.2	0.909	1
DPYSL4	Del_1q43	0.909	1
DPYSL4	Del_13q14.2	0.909	1
F2RL1	Del_1q43	0.909	1
F2RL1	Del_13q14.2	0.909	1
FLCN	Del_1q43	0.909	1
FLCN	Del_13q14.2	0.909	1
IFNB1	Del_1q43	0.909	1
KCNK1	Del_1q43	0.909	1
KCNK1	Del_13q14.2	0.909	1
NDUFA3	Del_1q43	0.909	1
NEK8	Del_1q43	0.909	1
NEK8	Del_13q14.2	0.909	1
NKX2-1	Del_1q43	0.909	1
NKX2-1	Del_13q14.2	0.909	1
ONECUT2	Del_1q43	0.909	1
ONECUT2	Del_13q14.2	0.909	1
PDLIM4	Del_1q43	0.909	1
PDLIM4	Del_13q14.2	0.909	1
PRDX5	Del_1q43	0.909	1
PRDX5	Del_13q14.2	0.909	1
RALB	Del_1q43	0.909	1
RALB	Del_13q14.2	0.909	1
RCN1	Del_13q14.2	0.909	1
RIN1	Del_1q43	0.909	1
RIN1	Del_13q14.2	0.909	1
RNF113B	Del_1q43	0.909	1
RNF113B	Del_13q14.2	0.909	1
RNF144A	Del_1q43	0.909	1
RNF144A	Del_13q14.2	0.909	1
TMEM47	Del_1q43	0.909	1
TMEM47	Del_13q14.2	0.909	1
TP53	7p-Amp	0.909	1
ZNHIT1	Del_1q43	0.909	1
ZNHIT1	Del_13q14.2	0.909	1
ARHGAP33	Del_1p31.1	0.91	1
CSK	Del_1p31.1	0.91	1
PLXDC2	Del_8p23.2	0.91	1
RIMBP3	Del_8p23.2	0.91	1
SETD2	ZNF814	0.91	1
STAG2	13q-Del	0.91	1
ZNF814	5p-Amp	0.91	1
ZNF814	5q-Amp	0.91	1
CDCA8	Del_9p23	0.911	1
DPYSL4	Del_9p23	0.911	1
F2RL1	Del_9p23	0.911	1
FLCN	Del_9p23	0.911	1
IFNB1	Del_9p23	0.911	1
NEK8	Del_9p23	0.911	1
NF1	3q-Del	0.911	1
NFE2L2	3q-Del	0.911	1
NKX2-1	Del_9p23	0.911	1
ONECUT2	Del_9p23	0.911	1
PDLIM4	Del_9p23	0.911	1
PRDX5	Del_9p23	0.911	1
RALB	Del_9p23	0.911	1
RIN1	Del_9p23	0.911	1
RNF113B	Del_9p23	0.911	1
RNF144A	Del_9p23	0.911	1
TMEM47	Del_9p23	0.911	1
ZNHIT1	Del_9p23	0.911	1
ARAP3	SMARCA4	0.912	1
ARHGAP33	SMARCA4	0.912	1
C16orf78	VHL	0.912	1
CDKN2A	Del_11q23.1	0.912	1
CSK	SMARCA4	0.912	1
CYP4F11	HNRNPM	0.912	1
CYP4F11	PIK3CA	0.912	1
ECHDC2	Del_11q23.1	0.912	1
EDIL3	Del_11q23.1	0.912	1
EGFR	KDM6A	0.912	1
EGFR	NF1	0.912	1
EGFR	NFE2L2	0.912	1
EGFR	Del_19p13.3	0.912	1
EMG1	SMARCA4	0.912	1
FAM160B2	SMARCA4	0.912	1
FGFR3	HNRNPM	0.912	1
FGFR3	PIK3CA	0.912	1
FGFR3	16p-Amp	0.912	1
FZR1	Del_11q23.1	0.912	1
GPR50	HNRNPM	0.912	1
GPR50	PIK3CA	0.912	1
GPR50	10q-Del	0.912	1
HNRNPM	NTRK3	0.912	1
HNRNPM	NUDT11	0.912	1
HNRNPM	PLXDC2	0.912	1
HNRNPM	RIMBP3	0.912	1
HNRNPM	SLC6A14	0.912	1
HNRNPM	ZNF521	0.912	1
HNRNPM	3q-Amp	0.912	1
HSPA2	Del_11q23.1	0.912	1
IMPA2	VHL	0.912	1
KDELR3	KDM6A	0.912	1
KDELR3	NFE2L2	0.912	1
KDM6A	PRKAG2	0.912	1
KDM6A	STAM	0.912	1
KDM6A	Amp_Xp22.2	0.912	1
KLK10	Del_11q23.1	0.912	1
KRAS	Del_11q23.1	0.912	1
MYF6	Del_11q23.1	0.912	1
NF1	PRKAG2	0.912	1
NF1	STAM	0.912	1
NF1	Amp_Xp22.2	0.912	1
NFE2L2	PRKAG2	0.912	1
NFE2L2	STAM	0.912	1
NFE2L2	Amp_Xp22.2	0.912	1
NTRK3	PIK3CA	0.912	1
NTRK3	10q-Del	0.912	1
NUDT11	PIK3CA	0.912	1
PIK3CA	PLXDC2	0.912	1
PIK3CA	RIMBP3	0.912	1
PIK3CA	SLC6A14	0.912	1
PIK3CA	TDG	0.912	1
PIK3CA	ZNF521	0.912	1
PIK3CA	3q-Amp	0.912	1
PLXDC2	16p-Amp	0.912	1
PRKAG2	Del_19p13.3	0.912	1
PRODH	Del_11q23.1	0.912	1
PTCH1	7q-Amp	0.912	1
SLC6A14	10q-Del	0.912	1
SMARCA4	STXBP3	0.912	1
SMARCA4	ZNF532	0.912	1
SMARCA4	Amp_Xq11.2	0.912	1
SMARCB1	7q-Amp	0.912	1
STAG2	Amp_2q32.1	0.912	1
12q-Amp	18q-Del	0.912	1
1p-Del	Del_9p23	0.912	1
Amp_Xp22.2	Del_19p13.3	0.912	1
ADCY8	6q-Del	0.913	1
DPCR1	18q-Del	0.913	1
STAG2	Amp_17q25.2	0.913	1
EMG1	14q-Del	0.914	1
FAM160B2	14q-Del	0.914	1
NF2	6p-Del	0.914	1
PTCH1	7p-Amp	0.914	1
SMARCA4	2q-Amp	0.914	1
SMARCB1	7p-Amp	0.914	1
ZFYVE26	Amp_3q26.32	0.914	1
ZNF598	7q-Amp	0.914	1
14q-Del	Amp_Xq11.2	0.914	1
Amp_2q32.1	Del_2q37.3	0.914	1
CARKD	SETD2	0.915	1
CARKD	5q-Amp	0.915	1
CDCA8	SETD2	0.915	1
CDCA8	5p-Amp	0.915	1
CDCA8	5q-Amp	0.915	1
DPYSL4	SETD2	0.915	1
DPYSL4	5p-Amp	0.915	1
DPYSL4	5q-Amp	0.915	1
F2RL1	SETD2	0.915	1
F2RL1	5p-Amp	0.915	1
F2RL1	5q-Amp	0.915	1
FLCN	SETD2	0.915	1
FLCN	5p-Amp	0.915	1
FLCN	5q-Amp	0.915	1
IFNB1	SETD2	0.915	1
KCNK1	SETD2	0.915	1
KCNK1	5p-Amp	0.915	1
KCNK1	5q-Amp	0.915	1
KDELR3	5p-Amp	0.915	1
KDELR3	5q-Amp	0.915	1
MUC5B	2q-Amp	0.915	1
NDUFA3	SETD2	0.915	1
NDUFA3	5p-Amp	0.915	1
NDUFA3	5q-Amp	0.915	1
NEK8	SETD2	0.915	1
NF1	6p-Del	0.915	1
NKX2-1	SETD2	0.915	1
NKX2-1	5p-Amp	0.915	1
NKX2-1	5q-Amp	0.915	1
ONECUT2	SETD2	0.915	1
PDLIM4	SETD2	0.915	1
PRDX5	SETD2	0.915	1
PRDX5	5p-Amp	0.915	1
PRDX5	5q-Amp	0.915	1
PTEN	Del_13q12.13	0.915	1
RALB	SETD2	0.915	1
RALB	5p-Amp	0.915	1
RALB	5q-Amp	0.915	1
RCN1	SETD2	0.915	1
RCN1	5p-Amp	0.915	1
RCN1	5q-Amp	0.915	1
RIN1	SETD2	0.915	1
RIN1	5p-Amp	0.915	1
RIN1	5q-Amp	0.915	1
RNF113B	SETD2	0.915	1
RNF113B	5p-Amp	0.915	1
RNF113B	5q-Amp	0.915	1
RNF144A	5p-Amp	0.915	1
RNF144A	5q-Amp	0.915	1
SETD2	TMEM47	0.915	1
SETD2	ZNHIT1	0.915	1
SETD2	Amp_Xp22.2	0.915	1
SMARCA4	Del_3p12.2	0.915	1
STAM	5p-Amp	0.915	1
STAM	5q-Amp	0.915	1
TMEM47	5p-Amp	0.915	1
TMEM47	5q-Amp	0.915	1
ZNHIT1	5p-Amp	0.915	1
ZNHIT1	5q-Amp	0.915	1
5p-Amp	Amp_Xp22.2	0.915	1
5q-Amp	Amp_Xp22.2	0.915	1
FAM18B2	Del_11q23.1	0.916	1
PTEN	Del_4q34.3	0.916	1
ZNF598	7p-Amp	0.916	1
ADAM28	KDM5C	0.917	1
ADAM28	SYNE1	0.917	1
ADAM28	3q-Amp	0.917	1
ADAM28	Del_4q34.3	0.917	1
C16orf78	KDM5C	0.917	1
C16orf78	SYNE1	0.917	1
C16orf78	3q-Amp	0.917	1
C16orf78	Del_4q34.3	0.917	1
C9orf171	KDM5C	0.917	1
C9orf171	SYNE1	0.917	1
C9orf171	3q-Amp	0.917	1
C9orf171	Del_4q34.3	0.917	1
CXorf23	KDM5C	0.917	1
CXorf23	SYNE1	0.917	1
CXorf23	3q-Amp	0.917	1
CXorf23	Del_4q34.3	0.917	1
FGFR3	Del_2q37.3	0.917	1
GALNT7	20p-Amp	0.917	1
GALNT7	20q-Amp	0.917	1
IMPA2	KDM5C	0.917	1
IMPA2	SYNE1	0.917	1
IMPA2	Del_4q34.3	0.917	1
INPP5E	KDM5C	0.917	1
INPP5E	3q-Amp	0.917	1
INPP5E	Del_4q34.3	0.917	1
KDM5C	KIF16B	0.917	1
KDM5C	OR10G3	0.917	1
KDM5C	PHF10	0.917	1
KDM5C	SCYL1	0.917	1
KDM5C	SLC14A1	0.917	1
KDM5C	SLC1A7	0.917	1
KDM5C	VCL	0.917	1
KIF16B	SYNE1	0.917	1
KIF16B	3q-Amp	0.917	1
KIF16B	Del_4q34.3	0.917	1
NTRK3	Del_2q37.3	0.917	1
OR10G3	SYNE1	0.917	1
OR10G3	3q-Amp	0.917	1
OR10G3	Del_4q34.3	0.917	1
PHF10	SYNE1	0.917	1
PHF10	3q-Amp	0.917	1
PHF10	Del_4q34.3	0.917	1
PTCH1	20p-Amp	0.917	1
PTCH1	20q-Amp	0.917	1
RAI1	20p-Amp	0.917	1
RAI1	20q-Amp	0.917	1
SCYL1	SYNE1	0.917	1
SCYL1	3q-Amp	0.917	1
SCYL1	Del_4q34.3	0.917	1
SLC14A1	SYNE1	0.917	1
SLC14A1	Del_4q34.3	0.917	1
SLC1A7	SYNE1	0.917	1
SLC6A14	Del_2q37.3	0.917	1
SMARCB1	20p-Amp	0.917	1
SMARCB1	20q-Amp	0.917	1
SPATA13	3q-Amp	0.917	1
SPATA13	Del_4q34.3	0.917	1
SYNE1	VCL	0.917	1
VCL	3q-Amp	0.917	1
VCL	Del_4q34.3	0.917	1
20p-Amp	Amp_Xp11.4	0.917	1
20q-Amp	Amp_Xp11.4	0.917	1
5p-Amp	Amp_3q26.32	0.917	1
3q-Del	8p-Del	0.917	1
Del_11q21	Del_14q31.1	0.917	1
ARAP3	STAG2	0.918	1
ARHGAP33	STAG2	0.918	1
CARKD	1q-Del	0.918	1
CDCA8	1q-Del	0.918	1
CDCA8	9q-Del	0.918	1
CSGALNACT2	GALNT7	0.918	1
CSGALNACT2	PTCH1	0.918	1
CSGALNACT2	RAI1	0.918	1
CSGALNACT2	SMARCB1	0.918	1
CSGALNACT2	Amp_Xp11.4	0.918	1
CSK	STAG2	0.918	1
DPCR1	GALNT7	0.918	1
DPCR1	PTCH1	0.918	1
DPCR1	RAI1	0.918	1
DPCR1	SMARCB1	0.918	1
DPYSL4	1q-Del	0.918	1
DPYSL4	9q-Del	0.918	1
EMG1	STAG2	0.918	1
F2RL1	1q-Del	0.918	1
F2RL1	9q-Del	0.918	1
FAM160B2	STAG2	0.918	1
FLCN	1q-Del	0.918	1
FLCN	9q-Del	0.918	1
IFNB1	1q-Del	0.918	1
IFNB1	9q-Del	0.918	1
KCNK1	1q-Del	0.918	1
KDM5C	Del_10q23.31	0.918	1
KDM6A	17q-Amp	0.918	1
NDUFA3	1q-Del	0.918	1
NEK8	1q-Del	0.918	1
NEK8	9q-Del	0.918	1
NF1	1p-Del	0.918	1
NF2	17q-Amp	0.918	1
NFE2L2	17q-Amp	0.918	1
NFE2L2	1p-Del	0.918	1
NKX2-1	1q-Del	0.918	1
NKX2-1	9q-Del	0.918	1
ONECUT2	1q-Del	0.918	1
ONECUT2	9q-Del	0.918	1
PDLIM4	1q-Del	0.918	1
PDLIM4	9q-Del	0.918	1
PRDX5	1q-Del	0.918	1
PRDX5	9q-Del	0.918	1
RALB	1q-Del	0.918	1
RALB	9q-Del	0.918	1
RIN1	1q-Del	0.918	1
RIN1	9q-Del	0.918	1
RNF113B	1q-Del	0.918	1
RNF113B	9q-Del	0.918	1
RNF144A	1q-Del	0.918	1
RNF144A	9q-Del	0.918	1
STAG2	STXBP3	0.918	1
STAG2	ZNF532	0.918	1
STAG2	Amp_Xq11.2	0.918	1
SYNE1	Del_10q23.31	0.918	1
TMEM47	1q-Del	0.918	1
TMEM47	9q-Del	0.918	1
ZNF814	9q-Del	0.918	1
ZNHIT1	1q-Del	0.918	1
ZNHIT1	9q-Del	0.918	1
CSK	VHL	0.919	1
CYP4F11	ZNF598	0.919	1
FGFR3	ZNF598	0.919	1
GPR50	ZNF598	0.919	1
NTRK3	ZNF598	0.919	1
NUDT11	ZNF598	0.919	1
PLXDC2	ZNF598	0.919	1
RIMBP3	ZNF598	0.919	1
SLC6A14	ZNF598	0.919	1
TDG	ZNF598	0.919	1
ZNF521	ZNF598	0.919	1
8p-Del	Del_9p23	0.919	1
CARKD	12p-Amp	0.92	1
CDCA8	12p-Amp	0.92	1
CDCA8	9p-Del	0.92	1
CDKN2A	MET	0.92	1
CSGALNACT2	18p-Del	0.92	1
CSGALNACT2	Del_1p31.1	0.92	1
DPCR1	18p-Del	0.92	1
DPYSL4	12p-Amp	0.92	1
DPYSL4	9p-Del	0.92	1
ECHDC2	MET	0.92	1
EDIL3	MET	0.92	1
ENO1	MET	0.92	1
F2RL1	12p-Amp	0.92	1
F2RL1	9p-Del	0.92	1
FLCN	12p-Amp	0.92	1
FLCN	9p-Del	0.92	1
FZR1	MET	0.92	1
HSPA2	MET	0.92	1
IFNB1	12p-Amp	0.92	1
IFNB1	9p-Del	0.92	1
KCNK1	12p-Amp	0.92	1
KDELR3	1q-Del	0.92	1
KDELR3	9q-Del	0.92	1
KLK10	MET	0.92	1
KRAS	MET	0.92	1
MET	MYF6	0.92	1
MET	PRODH	0.92	1
MET	Xp-Del	0.92	1
MTOR	Del_3p21.2	0.92	1
MTOR	Del_19p13.3	0.92	1
MUC5B	NFE2L2	0.92	1
MUC5B	Del_19p13.3	0.92	1
NDUFA3	12p-Amp	0.92	1
NEK8	12p-Amp	0.92	1
NEK8	9p-Del	0.92	1
NKX2-1	12p-Amp	0.92	1
NKX2-1	9p-Del	0.92	1
ONECUT2	12p-Amp	0.92	1
ONECUT2	9p-Del	0.92	1
PDLIM4	12p-Amp	0.92	1
PDLIM4	9p-Del	0.92	1
PIK3CA	Del_14q31.1	0.92	1
PRDX5	12p-Amp	0.92	1
PRDX5	9p-Del	0.92	1
RALB	12p-Amp	0.92	1
RALB	9p-Del	0.92	1
RCN1	12p-Amp	0.92	1
RIN1	12p-Amp	0.92	1
RIN1	9p-Del	0.92	1
RNF113B	12p-Amp	0.92	1
RNF113B	9p-Del	0.92	1
RNF144A	12p-Amp	0.92	1
RNF144A	9p-Del	0.92	1
STAM	1q-Del	0.92	1
STAM	9q-Del	0.92	1
TMEM47	12p-Amp	0.92	1
TMEM47	9p-Del	0.92	1
ZNHIT1	12p-Amp	0.92	1
ZNHIT1	9p-Del	0.92	1
3p-Del	6q-Del	0.92	1
ADCY8	EGFR	0.921	1
ADCY8	KDELR3	0.921	1
ADCY8	PRKAG2	0.921	1
ADCY8	STAM	0.921	1
ADCY8	Amp_Xp22.2	0.921	1
ARAP3	Amp_17q25.2	0.921	1
CARKD	13q-Del	0.921	1
CDCA8	13q-Del	0.921	1
DPYSL4	13q-Del	0.921	1
EGFR	ZFYVE26	0.921	1
F2RL1	13q-Del	0.921	1
FLCN	13q-Del	0.921	1
IMPA2	Del_3p14.1	0.921	1
INPP5E	Del_3p14.1	0.921	1
KCNK1	13q-Del	0.921	1
KDELR3	ZFYVE26	0.921	1
NDUFA3	13q-Del	0.921	1
NEK8	13q-Del	0.921	1
NKX2-1	13q-Del	0.921	1
ONECUT2	13q-Del	0.921	1
OR10G3	Del_3p14.1	0.921	1
PDLIM4	13q-Del	0.921	1
PRDX5	13q-Del	0.921	1
PRKAG2	ZFYVE26	0.921	1
RALB	13q-Del	0.921	1
RCN1	13q-Del	0.921	1
RIN1	13q-Del	0.921	1
RNF113B	13q-Del	0.921	1
RNF144A	13q-Del	0.921	1
STAM	ZFYVE26	0.921	1
TMEM47	13q-Del	0.921	1
VCL	Del_3p14.1	0.921	1
ZFYVE26	Amp_Xp22.2	0.921	1
ZNF598	17p-Amp	0.921	1
ZNF598	Del_9p21.3	0.921	1
ZNHIT1	13q-Del	0.921	1
5p-Amp	Del_4q34.3	0.921	1
Amp_17q25.2	Amp_Xq11.2	0.921	1
ADCY8	FAM18B2	0.922	1
FAM18B2	ZFYVE26	0.922	1
3q-Del	Del_13q14.2	0.922	1
Del_3p14.1	Del_11q23.1	0.922	1
ARAP3	ZNF814	0.923	1
ARAP3	Del_16q23.3	0.923	1
ARHGAP33	ZNF814	0.923	1
CARKD	21q-Del	0.923	1
CDCA8	21q-Del	0.923	1
CSK	ZNF814	0.923	1
CSK	Del_16q23.3	0.923	1
DPYSL4	21q-Del	0.923	1
EMG1	ZNF814	0.923	1
EMG1	Del_16q23.3	0.923	1
F2RL1	21q-Del	0.923	1
FAM160B2	ZNF814	0.923	1
FAM160B2	Del_16q23.3	0.923	1
FLCN	21q-Del	0.923	1
IFNB1	21q-Del	0.923	1
KCNK1	21q-Del	0.923	1
KDELR3	12p-Amp	0.923	1
KDELR3	9p-Del	0.923	1
NDUFA3	21q-Del	0.923	1
NEK8	21q-Del	0.923	1
NKX2-1	21q-Del	0.923	1
ONECUT2	21q-Del	0.923	1
PDLIM4	21q-Del	0.923	1
PRDX5	21q-Del	0.923	1
RALB	21q-Del	0.923	1
RIN1	21q-Del	0.923	1
RNF113B	21q-Del	0.923	1
RNF144A	21q-Del	0.923	1
STAM	9p-Del	0.923	1
STXBP3	ZNF814	0.923	1
STXBP3	Del_16q23.3	0.923	1
TMEM47	21q-Del	0.923	1
ZNF532	ZNF814	0.923	1
ZNF532	Del_16q23.3	0.923	1
ZNF814	Amp_2q32.1	0.923	1
ZNF814	Amp_Xq11.2	0.923	1
ZNHIT1	21q-Del	0.923	1
14q-Del	Amp_5q35.1	0.923	1
6p-Del	Del_3p12.2	0.923	1
Amp_Xq11.2	Del_16q23.3	0.923	1
ATM	10q-Del	0.924	1
CARKD	12q-Amp	0.924	1
CDCA8	12q-Amp	0.924	1
CSK	6q-Del	0.924	1
CYP4F11	Del_13q12.13	0.924	1
DPYSL4	12q-Amp	0.924	1
F2RL1	12q-Amp	0.924	1
FLCN	12q-Amp	0.924	1
IFNB1	12q-Amp	0.924	1
KCNK1	12q-Amp	0.924	1
NDUFA3	12q-Amp	0.924	1
NEFH	16p-Amp	0.924	1
NEK8	12q-Amp	0.924	1
NKX2-1	12q-Amp	0.924	1
ONECUT2	12q-Amp	0.924	1
PBRM1	3q-Del	0.924	1
PDLIM4	12q-Amp	0.924	1
PRDX5	12q-Amp	0.924	1
RALB	12q-Amp	0.924	1
RCN1	12q-Amp	0.924	1
RIN1	12q-Amp	0.924	1
RNF113B	12q-Amp	0.924	1
RNF144A	12q-Amp	0.924	1
STAG2	2q-Amp	0.924	1
TMEM47	12q-Amp	0.924	1
ZNF532	6q-Del	0.924	1
ZNHIT1	12q-Amp	0.924	1
18q-Del	Del_1q43	0.924	1
CDKN2A	Del_11q21	0.925	1
ECHDC2	Del_11q21	0.925	1
EDIL3	Del_11q21	0.925	1
FZR1	Del_11q21	0.925	1
HSPA2	Del_11q21	0.925	1
KLK10	Del_11q21	0.925	1
KRAS	Del_11q21	0.925	1
MET	Del_11q21	0.925	1
MYF6	Del_11q21	0.925	1
PBRM1	Amp_5q35.1	0.925	1
PRODH	Del_11q21	0.925	1
ZNF598	3q-Amp	0.925	1
ZNF598	Del_4q34.3	0.925	1
Xp-Del	Del_11q21	0.925	1
Del_1q43	Del_9p23	0.925	1
ADAM28	PTEN	0.926	1
ADCY8	3q-Del	0.926	1
C16orf78	PTEN	0.926	1
C9orf171	PTEN	0.926	1
CDKN2A	Amp_7q31.2	0.926	1
CXorf23	PTEN	0.926	1
CYP4F11	KDM6A	0.926	1
CYP4F11	NF1	0.926	1
CYP4F11	NFE2L2	0.926	1
CYP4F11	Del_19p13.3	0.926	1
ECHDC2	Amp_7q31.2	0.926	1
EDIL3	Amp_7q31.2	0.926	1
ENO1	Amp_7q31.2	0.926	1
FGFR3	NF1	0.926	1
FGFR3	NFE2L2	0.926	1
FGFR3	17p-Amp	0.926	1
FGFR3	Del_9p21.3	0.926	1
FGFR3	Del_19p13.3	0.926	1
GPR50	KDM6A	0.926	1
GPR50	NF1	0.926	1
GPR50	NFE2L2	0.926	1
GPR50	17p-Amp	0.926	1
GPR50	Del_9p21.3	0.926	1
GPR50	Del_19p13.3	0.926	1
IMPA2	PTEN	0.926	1
INPP5E	PTEN	0.926	1
KDELR3	13q-Del	0.926	1
KDM6A	NTRK3	0.926	1
KDM6A	NUDT11	0.926	1
KDM6A	PLXDC2	0.926	1
KDM6A	RIMBP3	0.926	1
KDM6A	SLC6A14	0.926	1
KDM6A	TDG	0.926	1
KDM6A	ZNF521	0.926	1
KIF16B	PTEN	0.926	1
MYF6	Amp_7q31.2	0.926	1
NF1	NUDT11	0.926	1
NF1	PLXDC2	0.926	1
NF1	RIMBP3	0.926	1
NF1	SLC6A14	0.926	1
NF1	TDG	0.926	1
NF1	ZNF521	0.926	1
NFE2L2	NTRK3	0.926	1
NFE2L2	NUDT11	0.926	1
NFE2L2	PLXDC2	0.926	1
NFE2L2	RIMBP3	0.926	1
NFE2L2	SLC6A14	0.926	1
NFE2L2	TDG	0.926	1
NTRK3	Del_19p13.3	0.926	1
NUDT11	17p-Amp	0.926	1
NUDT11	Del_19p13.3	0.926	1
OR10G3	PTEN	0.926	1
PHF10	PTEN	0.926	1
PLXDC2	Del_19p13.3	0.926	1
PRKAG2	13q-Del	0.926	1
PTEN	SCYL1	0.926	1
PTEN	SLC14A1	0.926	1
PTEN	SLC1A7	0.926	1
PTEN	SPATA13	0.926	1
PTEN	VCL	0.926	1
RIMBP3	Del_9p21.3	0.926	1
SLC6A14	17p-Amp	0.926	1
SLC6A14	Del_19p13.3	0.926	1
STAM	13q-Del	0.926	1
TDG	Del_19p13.3	0.926	1
ZNF521	17p-Amp	0.926	1
ZNF521	Del_9p21.3	0.926	1
ZNF521	Del_19p13.3	0.926	1
5p-Amp	Del_3p14.1	0.926	1
13q-Del	Amp_Xp22.2	0.926	1
Xp-Del	Amp_7q31.2	0.926	1
12q-Amp	18p-Del	0.927	1
5p-Amp	Del_9p21.3	0.927	1
FGFR3	17p-Del	0.928	1
GALNT7	PTCH1	0.928	1
GALNT7	RAI1	0.928	1
GALNT7	Amp_Xp11.4	0.928	1
GPR50	17p-Del	0.928	1
GPR50	Del_3p12.2	0.928	1
HNRNPM	PTEN	0.928	1
HNRNPM	Amp_5q35.1	0.928	1
KDELR3	21q-Del	0.928	1
PIK3CA	Amp_5q35.1	0.928	1
PTCH1	RAI1	0.928	1
PTCH1	SMARCB1	0.928	1
PTCH1	Amp_Xp11.4	0.928	1
RAI1	SMARCB1	0.928	1
RAI1	Amp_Xp11.4	0.928	1
RIMBP3	17p-Del	0.928	1
SLC6A14	17p-Del	0.928	1
SMARCB1	Amp_Xp11.4	0.928	1
ZNF521	Del_3p12.2	0.928	1
ZNF814	3p-Amp	0.928	1
2q-Amp	Amp_5q35.1	0.928	1
3p-Amp	Del_16q23.3	0.928	1
ADAM28	Amp_2q32.1	0.929	1
ADAM28	Amp_19p13.2	0.929	1
ARAP3	HNRNPM	0.929	1
ARAP3	PIK3CA	0.929	1
ARHGAP33	HNRNPM	0.929	1
ARHGAP33	PIK3CA	0.929	1
ATM	CDKN2A	0.929	1
ATM	ECHDC2	0.929	1
ATM	EDIL3	0.929	1
ATM	ENO1	0.929	1
ATM	FZR1	0.929	1
ATM	HSPA2	0.929	1
ATM	KLK10	0.929	1
ATM	KRAS	0.929	1
ATM	MYF6	0.929	1
ATM	Xp-Del	0.929	1
C16orf78	Amp_2q32.1	0.929	1
C9orf171	Amp_2q32.1	0.929	1
C9orf171	Amp_19p13.2	0.929	1
CARKD	20p-Amp	0.929	1
CARKD	20q-Amp	0.929	1
CDCA8	20p-Amp	0.929	1
CDCA8	20q-Amp	0.929	1
CDKN2A	NEFH	0.929	1
CDKN2A	NF2	0.929	1
CSGALNACT2	EGFR	0.929	1
CSGALNACT2	PRKAG2	0.929	1
CSGALNACT2	STAM	0.929	1
CSGALNACT2	Amp_Xp22.2	0.929	1
CSK	HNRNPM	0.929	1
CSK	PIK3CA	0.929	1
CXorf23	Amp_2q32.1	0.929	1
CXorf23	Amp_19p13.2	0.929	1
DPCR1	EGFR	0.929	1
DPCR1	KDELR3	0.929	1
DPCR1	PRKAG2	0.929	1
DPYSL4	20p-Amp	0.929	1
DPYSL4	20q-Amp	0.929	1
ECHDC2	NEFH	0.929	1
ECHDC2	NF2	0.929	1
EDIL3	NEFH	0.929	1
EDIL3	NF2	0.929	1
EMG1	HNRNPM	0.929	1
EMG1	PIK3CA	0.929	1
ENO1	NEFH	0.929	1
ENO1	NF2	0.929	1
F2RL1	20p-Amp	0.929	1
F2RL1	20q-Amp	0.929	1
FAM160B2	PIK3CA	0.929	1
FLCN	20p-Amp	0.929	1
FLCN	20q-Amp	0.929	1
FZR1	NEFH	0.929	1
FZR1	NF2	0.929	1
HNRNPM	STXBP3	0.929	1
HNRNPM	ZNF532	0.929	1
HNRNPM	Amp_Xq11.2	0.929	1
HSPA2	NEFH	0.929	1
HSPA2	NF2	0.929	1
IFNB1	20p-Amp	0.929	1
IFNB1	20q-Amp	0.929	1
IMPA2	Amp_19p13.2	0.929	1
INPP5E	Amp_2q32.1	0.929	1
INPP5E	Amp_19p13.2	0.929	1
KCNK1	20p-Amp	0.929	1
KCNK1	20q-Amp	0.929	1
KIF16B	Amp_2q32.1	0.929	1
KIF16B	Amp_19p13.2	0.929	1
KLK10	NF2	0.929	1
KRAS	NEFH	0.929	1
KRAS	NF2	0.929	1
MYF6	NEFH	0.929	1
MYF6	NF2	0.929	1
NDUFA3	20p-Amp	0.929	1
NDUFA3	20q-Amp	0.929	1
NEFH	PRODH	0.929	1
NEFH	Xp-Del	0.929	1
NEK8	20p-Amp	0.929	1
NEK8	20q-Amp	0.929	1
NF2	PRODH	0.929	1
NF2	Xp-Del	0.929	1
ONECUT2	20p-Amp	0.929	1
ONECUT2	20q-Amp	0.929	1
OR10G3	Amp_2q32.1	0.929	1
OR10G3	Amp_19p13.2	0.929	1
PDLIM4	20p-Amp	0.929	1
PDLIM4	20q-Amp	0.929	1
PHF10	Amp_19p13.2	0.929	1
PIK3CA	STXBP3	0.929	1
PIK3CA	ZNF532	0.929	1
PIK3CA	Amp_Xq11.2	0.929	1
PRDX5	20p-Amp	0.929	1
PRDX5	20q-Amp	0.929	1
RALB	20p-Amp	0.929	1
RALB	20q-Amp	0.929	1
RCN1	20p-Amp	0.929	1
RCN1	20q-Amp	0.929	1
RIN1	20p-Amp	0.929	1
RIN1	20q-Amp	0.929	1
RNF113B	20p-Amp	0.929	1
RNF113B	20q-Amp	0.929	1
RNF144A	20p-Amp	0.929	1
RNF144A	20q-Amp	0.929	1
SCYL1	Amp_2q32.1	0.929	1
SLC1A7	Amp_2q32.1	0.929	1
SLC1A7	Amp_19p13.2	0.929	1
SPATA13	Amp_2q32.1	0.929	1
SPATA13	Amp_19p13.2	0.929	1
TMEM47	20p-Amp	0.929	1
TMEM47	20q-Amp	0.929	1
VCL	Amp_19p13.2	0.929	1
ZNHIT1	20p-Amp	0.929	1
ZNHIT1	20q-Amp	0.929	1
CDKN2A	7q-Amp	0.93	1
CYP4F11	8p-Del	0.93	1
ECHDC2	7q-Amp	0.93	1
EDIL3	7q-Amp	0.93	1
ENO1	7q-Amp	0.93	1
FGFR3	16q-Amp	0.93	1
MYF6	7q-Amp	0.93	1
PLXDC2	16q-Amp	0.93	1
PLXDC2	8p-Del	0.93	1
RIMBP3	8p-Del	0.93	1
SLC6A14	8p-Del	0.93	1
STXBP3	Del_3p14.1	0.93	1
7q-Amp	Xp-Del	0.93	1
ADAM28	3p-Amp	0.931	1
C16orf78	3p-Amp	0.931	1
C9orf171	3p-Amp	0.931	1
CDKN2A	7p-Amp	0.931	1
CXorf23	3p-Amp	0.931	1
DPCR1	Amp_3q26.32	0.931	1
ECHDC2	7p-Amp	0.931	1
EDIL3	7p-Amp	0.931	1
ENO1	7p-Amp	0.931	1
IMPA2	3p-Amp	0.931	1
INPP5E	3p-Amp	0.931	1
KIF16B	3p-Amp	0.931	1
MUC5B	20p-Amp	0.931	1
MUC5B	20q-Amp	0.931	1
MYF6	7p-Amp	0.931	1
OR10G3	3p-Amp	0.931	1
PHF10	3p-Amp	0.931	1
SCYL1	3p-Amp	0.931	1
SPATA13	3p-Amp	0.931	1
SYNE1	1p-Del	0.931	1
SYNE1	Del_1p31.1	0.931	1
VCL	3p-Amp	0.931	1
5p-Amp	9p-Del	0.931	1
7p-Amp	Xp-Del	0.931	1
Amp_2q32.1	Del_9p21.3	0.931	1
C16orf78	3p-Del	0.932	1
CYP4F11	Del_13q14.2	0.932	1
GPR50	Del_1q43	0.932	1
INPP5E	3p-Del	0.932	1
KDM6A	Amp_7q31.2	0.932	1
MUC5B	Amp_7q31.2	0.932	1
RAI1	18q-Del	0.932	1
RIMBP3	Del_1q43	0.932	1
SLC6A14	Del_1q43	0.932	1
12p-Amp	Del_11q23.1	0.932	1
18q-Del	Amp_Xp11.4	0.932	1
Amp_17q25.2	Del_16q23.3	0.932	1
ADCY8	CYP4F11	0.933	1
ADCY8	FGFR3	0.933	1
ADCY8	GPR50	0.933	1
ADCY8	NTRK3	0.933	1
ADCY8	NUDT11	0.933	1
ADCY8	PLXDC2	0.933	1
ADCY8	RIMBP3	0.933	1
ADCY8	SLC6A14	0.933	1
ADCY8	TDG	0.933	1
ADCY8	ZNF521	0.933	1
ATM	MET	0.933	1
CDKN2A	SMARCA4	0.933	1
CSGALNACT2	Amp_17q25.2	0.933	1
CYP4F11	ZFYVE26	0.933	1
DPCR1	Amp_17q25.2	0.933	1
EDIL3	SMARCA4	0.933	1
ENO1	SMARCA4	0.933	1
FGFR3	ZFYVE26	0.933	1
FZR1	SMARCA4	0.933	1
HNRNPM	Amp_2q32.1	0.933	1
HSPA2	SMARCA4	0.933	1
KLK10	SMARCA4	0.933	1
KRAS	SMARCA4	0.933	1
MET	NEFH	0.933	1
MUC5B	Del_11q23.1	0.933	1
MYF6	SMARCA4	0.933	1
NTRK3	ZFYVE26	0.933	1
NUDT11	ZFYVE26	0.933	1
PLXDC2	ZFYVE26	0.933	1
PRODH	SMARCA4	0.933	1
PTEN	18q-Del	0.933	1
PTEN	Del_13q14.2	0.933	1
RIMBP3	ZFYVE26	0.933	1
SLC6A14	ZFYVE26	0.933	1
SMARCA4	17q-Amp	0.933	1
SMARCA4	Xp-Del	0.933	1
TDG	ZFYVE26	0.933	1
TP53	5p-Amp	0.933	1
TP53	5q-Amp	0.933	1
ZFYVE26	ZNF521	0.933	1
18p-Del	Del_3p26.3	0.933	1
ADAM28	2q-Amp	0.934	1
C16orf78	2q-Amp	0.934	1
C9orf171	2q-Amp	0.934	1
CXorf23	2q-Amp	0.934	1
FGFR3	Del_9p23	0.934	1
INPP5E	2q-Amp	0.934	1
KIF16B	2q-Amp	0.934	1
NF2	Del_14q31.1	0.934	1
OR10G3	2q-Amp	0.934	1
PTCH1	Del_3p21.2	0.934	1
RIMBP3	Del_9p23	0.934	1
SCYL1	2q-Amp	0.934	1
SLC1A7	2q-Amp	0.934	1
SLC6A14	Del_9p23	0.934	1
SPATA13	2q-Amp	0.934	1
VCL	2q-Amp	0.934	1
ZNF521	Del_9p23	0.934	1
ZNF814	2q-Amp	0.934	1
13q-Del	14q-Del	0.934	1
ARAP3	ZNF598	0.935	1
ARHGAP33	ZNF598	0.935	1
CSK	ZNF598	0.935	1
EMG1	ZNF598	0.935	1
FAM160B2	ZNF598	0.935	1
STXBP3	ZNF598	0.935	1
SYNE1	Del_8p23.2	0.935	1
ZNF532	ZNF598	0.935	1
ZNF598	Amp_Xq11.2	0.935	1
12p-Amp	Del_4q34.3	0.935	1
13q-Del	Del_11q23.1	0.935	1
14q-Del	3q-Del	0.935	1
Amp_Xp11.4	Del_14q31.1	0.935	1
CARKD	18q-Del	0.936	1
CDCA8	18q-Del	0.936	1
CSK	Del_10q23.31	0.936	1
EMG1	Del_10q23.31	0.936	1
ENO1	Del_6q26	0.936	1
F2RL1	18q-Del	0.936	1
FAM18B2	18q-Del	0.936	1
FZR1	Del_6q26	0.936	1
HNRNPM	12p-Amp	0.936	1
IFNB1	18q-Del	0.936	1
KCNK1	18q-Del	0.936	1
KLK10	Del_6q26	0.936	1
MYF6	Del_6q26	0.936	1
NEK8	18q-Del	0.936	1
NKX2-1	18q-Del	0.936	1
ONECUT2	18q-Del	0.936	1
PBRM1	PLXDC2	0.936	1
PBRM1	RIMBP3	0.936	1
PBRM1	ZNF521	0.936	1
PDLIM4	18q-Del	0.936	1
PRDX5	18q-Del	0.936	1
PRODH	Del_6q26	0.936	1
RALB	18q-Del	0.936	1
RCN1	18q-Del	0.936	1
RIN1	18q-Del	0.936	1
RNF113B	18q-Del	0.936	1
RNF144A	18q-Del	0.936	1
SMARCA4	18q-Del	0.936	1
STAG2	Del_11q23.1	0.936	1
TMEM47	18q-Del	0.936	1
ZNHIT1	18q-Del	0.936	1
Xp-Del	Del_6q26	0.936	1
Amp_Xq11.2	Del_10q23.31	0.936	1
Del_13q12.13	Del_19p13.3	0.936	1
CSGALNACT2	TP53	0.937	1
DPCR1	6q-Del	0.937	1
KDM5C	NF1	0.937	1
KDM5C	NFE2L2	0.937	1
KDM6A	3q-Amp	0.937	1
KDM6A	Del_4q34.3	0.937	1
MTOR	Amp_5q35.1	0.937	1
NF1	SYNE1	0.937	1
NF1	3q-Amp	0.937	1
8p-Del	Del_11q21	0.937	1
CDKN2A	STAG2	0.938	1
ECHDC2	STAG2	0.938	1
EDIL3	STAG2	0.938	1
EGFR	GALNT7	0.938	1
EGFR	PTCH1	0.938	1
EGFR	RAI1	0.938	1
EGFR	SMARCB1	0.938	1
EGFR	Amp_Xp11.4	0.938	1
ENO1	STAG2	0.938	1
FZR1	STAG2	0.938	1
GALNT7	PRKAG2	0.938	1
GALNT7	STAM	0.938	1
GALNT7	Amp_Xp22.2	0.938	1
HNRNPM	3p-Amp	0.938	1
HSPA2	STAG2	0.938	1
KDELR3	PTCH1	0.938	1
KDM5C	Del_3p12.2	0.938	1
KDM6A	7q-Amp	0.938	1
KLK10	STAG2	0.938	1
KRAS	STAG2	0.938	1
MYF6	STAG2	0.938	1
PBRM1	8p-Del	0.938	1
PRKAG2	PTCH1	0.938	1
PRKAG2	RAI1	0.938	1
PRKAG2	SMARCB1	0.938	1
PRKAG2	Amp_Xp11.4	0.938	1
PRODH	STAG2	0.938	1
PTCH1	STAM	0.938	1
PTCH1	Amp_Xp22.2	0.938	1
RAI1	18p-Del	0.938	1
RAI1	Amp_Xp22.2	0.938	1
SMARCB1	STAM	0.938	1
SMARCB1	Amp_Xp22.2	0.938	1
STAG2	Xp-Del	0.938	1
STAM	20p-Amp	0.938	1
STAM	20q-Amp	0.938	1
STAM	Amp_Xp11.4	0.938	1
SYNE1	14q-Del	0.938	1
16q-Amp	5p-Amp	0.938	1
16q-Amp	5q-Amp	0.938	1
20p-Amp	Amp_Xp22.2	0.938	1
20q-Amp	Amp_Xp22.2	0.938	1
18p-Del	Amp_Xp11.4	0.938	1
CARKD	18p-Del	0.939	1
CDCA8	18p-Del	0.939	1
CSK	6p-Del	0.939	1
F2RL1	18p-Del	0.939	1
IFNB1	18p-Del	0.939	1
KCNK1	18p-Del	0.939	1
KDM6A	17p-Amp	0.939	1
KDM6A	7p-Amp	0.939	1
NEK8	18p-Del	0.939	1
NFE2L2	17p-Amp	0.939	1
NKX2-1	18p-Del	0.939	1
ONECUT2	18p-Del	0.939	1
PDLIM4	18p-Del	0.939	1
PRDX5	18p-Del	0.939	1
RALB	18p-Del	0.939	1
RCN1	18p-Del	0.939	1
RIN1	18p-Del	0.939	1
RNF113B	18p-Del	0.939	1
RNF144A	18p-Del	0.939	1
SMARCA4	16p-Amp	0.939	1
TMEM47	18p-Del	0.939	1
ZNHIT1	18p-Del	0.939	1
20p-Amp	21q-Del	0.939	1
20q-Amp	21q-Del	0.939	1
18p-Del	Del_1q43	0.939	1
ADAM28	Del_11q23.1	0.94	1
C16orf78	Del_11q23.1	0.94	1
C9orf171	Del_11q23.1	0.94	1
CXorf23	Del_11q23.1	0.94	1
FGFR3	5p-Amp	0.94	1
FGFR3	5q-Amp	0.94	1
GPR50	5p-Amp	0.94	1
GPR50	5q-Amp	0.94	1
IMPA2	Del_11q23.1	0.94	1
INPP5E	Del_11q23.1	0.94	1
KIF16B	Del_11q23.1	0.94	1
MET	SMARCA4	0.94	1
MET	3q-Del	0.94	1
MTOR	VHL	0.94	1
NTRK3	5p-Amp	0.94	1
NTRK3	5q-Amp	0.94	1
NUDT11	5p-Amp	0.94	1
OR10G3	Del_11q23.1	0.94	1
PHF10	Del_11q23.1	0.94	1
PLXDC2	SETD2	0.94	1
SCYL1	Del_11q23.1	0.94	1
SETD2	TDG	0.94	1
SLC14A1	Del_11q23.1	0.94	1
SLC1A7	Del_11q23.1	0.94	1
SPATA13	Del_11q23.1	0.94	1
TDG	5p-Amp	0.94	1
VCL	Del_11q23.1	0.94	1
16p-Amp	18q-Del	0.94	1
ARAP3	KDM6A	0.941	1
ARAP3	NF1	0.941	1
ARAP3	NFE2L2	0.941	1
ARAP3	17q-Amp	0.941	1
ARAP3	Del_19p13.3	0.941	1
ARHGAP33	KDM6A	0.941	1
ARHGAP33	NFE2L2	0.941	1
ARHGAP33	1p-Del	0.941	1
ARHGAP33	Del_19p13.3	0.941	1
ATM	Amp_5q35.1	0.941	1
CSGALNACT2	CYP4F11	0.941	1
CSGALNACT2	GPR50	0.941	1
CSGALNACT2	NTRK3	0.941	1
CSGALNACT2	NUDT11	0.941	1
CSGALNACT2	PLXDC2	0.941	1
CSGALNACT2	RIMBP3	0.941	1
CSGALNACT2	SLC6A14	0.941	1
CSGALNACT2	TDG	0.941	1
CSGALNACT2	ZNF521	0.941	1
CSK	KDM6A	0.941	1
CSK	NF1	0.941	1
CSK	NFE2L2	0.941	1
CSK	1p-Del	0.941	1
CSK	Del_19p13.3	0.941	1
CYP4F11	DPCR1	0.941	1
DPCR1	FGFR3	0.941	1
DPCR1	NTRK3	0.941	1
DPCR1	NUDT11	0.941	1
DPCR1	PLXDC2	0.941	1
DPCR1	RIMBP3	0.941	1
DPCR1	SLC6A14	0.941	1
DPCR1	TDG	0.941	1
DPCR1	ZNF521	0.941	1
EMG1	KDM6A	0.941	1
EMG1	NF1	0.941	1
EMG1	NFE2L2	0.941	1
EMG1	Del_19p13.3	0.941	1
FAM160B2	KDM6A	0.941	1
FAM160B2	NF1	0.941	1
FAM160B2	NFE2L2	0.941	1
FAM160B2	Del_19p13.3	0.941	1
KDM6A	STXBP3	0.941	1
KDM6A	ZNF532	0.941	1
KDM6A	Amp_Xq11.2	0.941	1
NF1	STXBP3	0.941	1
NF1	ZNF532	0.941	1
NF1	Amp_Xq11.2	0.941	1
NF2	Amp_5q35.1	0.941	1
NFE2L2	STXBP3	0.941	1
NFE2L2	ZNF532	0.941	1
NFE2L2	Amp_Xq11.2	0.941	1
SETD2	Del_1p31.1	0.941	1
STXBP3	Del_19p13.3	0.941	1
VHL	8p-Del	0.941	1
ZNF532	Del_19p13.3	0.941	1
17q-Amp	Amp_Xq11.2	0.941	1
17p-Del	Del_19p13.3	0.941	1
18q-Del	Del_3p26.3	0.941	1
Amp_Xq11.2	Del_19p13.3	0.941	1
ARAP3	Del_8p23.2	0.942	1
CDKN2A	ZNF814	0.942	1
CDKN2A	Del_16q23.3	0.942	1
ECHDC2	ZNF814	0.942	1
ECHDC2	Del_16q23.3	0.942	1
EDIL3	ZNF814	0.942	1
EDIL3	Del_16q23.3	0.942	1
ENO1	ZNF814	0.942	1
ENO1	Del_6q22.31	0.942	1
ENO1	Del_16q23.3	0.942	1
FZR1	ZNF814	0.942	1
FZR1	Del_6q22.31	0.942	1
FZR1	Del_16q23.3	0.942	1
HSPA2	ZNF814	0.942	1
HSPA2	Del_16q23.3	0.942	1
KLK10	ZNF814	0.942	1
KLK10	Del_6q22.31	0.942	1
KLK10	Del_16q23.3	0.942	1
KRAS	ZNF814	0.942	1
KRAS	Del_16q23.3	0.942	1
MUC5B	7q-Amp	0.942	1
MYF6	ZNF814	0.942	1
MYF6	Del_6q22.31	0.942	1
MYF6	Del_16q23.3	0.942	1
PRODH	ZNF814	0.942	1
PRODH	Del_6q22.31	0.942	1
PTEN	18p-Del	0.942	1
20p-Amp	Del_16q23.3	0.942	1
20q-Amp	Del_16q23.3	0.942	1
Xp-Del	Del_6q22.31	0.942	1
Xp-Del	Del_16q23.3	0.942	1
ENO1	Del_1p36.31	0.943	1
HNRNPM	2q-Amp	0.943	1
MYF6	Del_1p36.31	0.943	1
NF2	Del_9p21.3	0.943	1
PIK3CA	2q-Amp	0.943	1
STXBP3	3p-Del	0.943	1
SYNE1	21q-Del	0.943	1
12q-Amp	Del_11q23.1	0.943	1
18q-Del	3q-Del	0.943	1
1q-Del	9p-Del	0.943	1
Xp-Del	Del_1p36.31	0.943	1
Del_9p23	Del_11q21	0.943	1
ARAP3	16p-Amp	0.944	1
CARKD	Amp_3q26.32	0.944	1
CDCA8	Amp_3q26.32	0.944	1
CSK	10q-Del	0.944	1
DPYSL4	Amp_3q26.32	0.944	1
EGFR	Del_3p14.1	0.944	1
EMG1	10q-Del	0.944	1
F2RL1	Amp_3q26.32	0.944	1
FAM160B2	16p-Amp	0.944	1
FAM18B2	Del_11q21	0.944	1
FGFR3	9q-Del	0.944	1
FLCN	Amp_3q26.32	0.944	1
GPR50	1q-Del	0.944	1
IFNB1	Amp_3q26.32	0.944	1
KCNK1	Amp_3q26.32	0.944	1
NDUFA3	Amp_3q26.32	0.944	1
NEK8	Amp_3q26.32	0.944	1
ONECUT2	Amp_3q26.32	0.944	1
PDLIM4	Amp_3q26.32	0.944	1
PRDX5	Amp_3q26.32	0.944	1
PTCH1	Del_3p26.3	0.944	1
RALB	Amp_3q26.32	0.944	1
RCN1	Amp_3q26.32	0.944	1
RIMBP3	9q-Del	0.944	1
RIN1	Amp_3q26.32	0.944	1
RNF113B	Amp_3q26.32	0.944	1
RNF144A	Amp_3q26.32	0.944	1
SLC6A14	1q-Del	0.944	1
SMARCA4	18p-Del	0.944	1
TMEM47	Amp_3q26.32	0.944	1
TP53	Del_11q21	0.944	1
ZNF521	9q-Del	0.944	1
ZNHIT1	Amp_3q26.32	0.944	1
16p-Amp	Amp_Xq11.2	0.944	1
10q-Del	Amp_Xq11.2	0.944	1
MUC5B	7p-Amp	0.945	1
NEFH	Amp_3q26.32	0.945	1
NF2	Amp_3q26.32	0.945	1
16p-Amp	5p-Amp	0.945	1
16p-Amp	5q-Amp	0.945	1
13q-Del	Del_14q31.1	0.945	1
Del_3p12.2	Del_11q21	0.945	1
ADAM28	MET	0.946	1
ADCY8	ARAP3	0.946	1
ADCY8	ARHGAP33	0.946	1
ADCY8	CSK	0.946	1
ADCY8	EMG1	0.946	1
ADCY8	FAM160B2	0.946	1
ADCY8	STXBP3	0.946	1
ADCY8	ZNF532	0.946	1
ADCY8	Amp_Xq11.2	0.946	1
ARAP3	ZFYVE26	0.946	1
ARHGAP33	ZFYVE26	0.946	1
ATM	NEFH	0.946	1
C16orf78	MET	0.946	1
C9orf171	MET	0.946	1
CDKN2A	HNRNPM	0.946	1
CDKN2A	PIK3CA	0.946	1
CSK	ZFYVE26	0.946	1
CXorf23	MET	0.946	1
CYP4F11	12p-Amp	0.946	1
ECHDC2	HNRNPM	0.946	1
ECHDC2	PIK3CA	0.946	1
EDIL3	HNRNPM	0.946	1
EDIL3	PIK3CA	0.946	1
EGFR	KDELR3	0.946	1
EGFR	PRKAG2	0.946	1
EGFR	STAM	0.946	1
EGFR	Amp_Xp22.2	0.946	1
EMG1	ZFYVE26	0.946	1
ENO1	HNRNPM	0.946	1
ENO1	PIK3CA	0.946	1
FAM160B2	ZFYVE26	0.946	1
FGFR3	9p-Del	0.946	1
FZR1	HNRNPM	0.946	1
FZR1	PIK3CA	0.946	1
HNRNPM	HSPA2	0.946	1
HNRNPM	KLK10	0.946	1
HNRNPM	KRAS	0.946	1
HNRNPM	MYF6	0.946	1
HNRNPM	PRODH	0.946	1
HNRNPM	Xp-Del	0.946	1
HSPA2	PIK3CA	0.946	1
IMPA2	MET	0.946	1
INPP5E	MET	0.946	1
KDELR3	PRKAG2	0.946	1
KDELR3	Amp_Xp22.2	0.946	1
KIF16B	MET	0.946	1
KLK10	PIK3CA	0.946	1
KRAS	PIK3CA	0.946	1
MET	OR10G3	0.946	1
MET	PHF10	0.946	1
MET	SCYL1	0.946	1
MET	SLC14A1	0.946	1
MET	SLC1A7	0.946	1
MET	SPATA13	0.946	1
MET	VCL	0.946	1
MYF6	PIK3CA	0.946	1
NEFH	NF2	0.946	1
NTRK3	12p-Amp	0.946	1
PIK3CA	PRODH	0.946	1
PIK3CA	Xp-Del	0.946	1
PLXDC2	12p-Amp	0.946	1
PRKAG2	STAM	0.946	1
PRKAG2	Amp_Xp22.2	0.946	1
RAI1	Amp_3q26.32	0.946	1
RIMBP3	12p-Amp	0.946	1
RIMBP3	9p-Del	0.946	1
STAM	Amp_Xp22.2	0.946	1
STXBP3	ZFYVE26	0.946	1
SYNE1	Del_2q37.3	0.946	1
ZFYVE26	ZNF532	0.946	1
ZFYVE26	Amp_Xq11.2	0.946	1
ZNF521	12p-Amp	0.946	1
ZNF521	9p-Del	0.946	1
Amp_3q26.32	Amp_Xp11.4	0.946	1
Del_11q23.1	Del_14q31.1	0.946	1
Del_13q14.2	Del_19p13.3	0.946	1
CARKD	FAM18B2	0.947	1
CARKD	TP53	0.947	1
CDCA8	FAM18B2	0.947	1
CDCA8	TP53	0.947	1
CSGALNACT2	MUC5B	0.947	1
CSK	Del_2q37.3	0.947	1
DPCR1	MTOR	0.947	1
DPYSL4	FAM18B2	0.947	1
DPYSL4	TP53	0.947	1
F2RL1	FAM18B2	0.947	1
F2RL1	TP53	0.947	1
FAM18B2	IFNB1	0.947	1
FAM18B2	KCNK1	0.947	1
FAM18B2	NDUFA3	0.947	1
FAM18B2	NEK8	0.947	1
FAM18B2	NKX2-1	0.947	1
FAM18B2	ONECUT2	0.947	1
FAM18B2	PDLIM4	0.947	1
FAM18B2	PRDX5	0.947	1
FAM18B2	RALB	0.947	1
FAM18B2	RCN1	0.947	1
FAM18B2	RIN1	0.947	1
FAM18B2	RNF113B	0.947	1
FAM18B2	RNF144A	0.947	1
FAM18B2	TMEM47	0.947	1
FAM18B2	ZNHIT1	0.947	1
FAM18B2	18p-Del	0.947	1
FLCN	TP53	0.947	1
IFNB1	TP53	0.947	1
KCNK1	TP53	0.947	1
NDUFA3	TP53	0.947	1
NEK8	TP53	0.947	1
NKX2-1	TP53	0.947	1
ONECUT2	TP53	0.947	1
PDLIM4	TP53	0.947	1
PRDX5	TP53	0.947	1
RALB	TP53	0.947	1
RCN1	TP53	0.947	1
RIN1	TP53	0.947	1
RNF113B	TP53	0.947	1
RNF144A	TP53	0.947	1
STXBP3	Del_2q37.3	0.947	1
TMEM47	TP53	0.947	1
TP53	ZNHIT1	0.947	1
TP53	12p-Amp	0.947	1
ZNF598	3p-Amp	0.947	1
18p-Del	Del_3p21.2	0.947	1
8p-Del	Del_9p21.3	0.947	1
CARKD	3q-Del	0.948	1
CDCA8	3q-Del	0.948	1
CDKN2A	Amp_5q35.1	0.948	1
CYP4F11	GALNT7	0.948	1
CYP4F11	PTCH1	0.948	1
CYP4F11	RAI1	0.948	1
CYP4F11	SMARCB1	0.948	1
CYP4F11	13q-Del	0.948	1
CYP4F11	Amp_Xp11.4	0.948	1
DPYSL4	3q-Del	0.948	1
ECHDC2	Amp_5q35.1	0.948	1
EDIL3	Amp_5q35.1	0.948	1
ENO1	Amp_5q35.1	0.948	1
F2RL1	3q-Del	0.948	1
FGFR3	GALNT7	0.948	1
FGFR3	PTCH1	0.948	1
FGFR3	SMARCB1	0.948	1
FGFR3	Amp_Xp11.4	0.948	1
FLCN	3q-Del	0.948	1
GALNT7	GPR50	0.948	1
GALNT7	NUDT11	0.948	1
GALNT7	PLXDC2	0.948	1
GALNT7	RIMBP3	0.948	1
GALNT7	SLC6A14	0.948	1
GALNT7	TDG	0.948	1
GALNT7	ZNF521	0.948	1
GPR50	PTCH1	0.948	1
GPR50	SMARCB1	0.948	1
GPR50	Amp_Xp11.4	0.948	1
IFNB1	3q-Del	0.948	1
KCNK1	3q-Del	0.948	1
KDM5C	ZFYVE26	0.948	1
MYF6	Amp_5q35.1	0.948	1
NDUFA3	3q-Del	0.948	1
NKX2-1	3q-Del	0.948	1
NTRK3	PTCH1	0.948	1
NTRK3	Amp_Xp11.4	0.948	1
NUDT11	RAI1	0.948	1
NUDT11	SMARCB1	0.948	1
NUDT11	Amp_Xp11.4	0.948	1
PLXDC2	RAI1	0.948	1
PLXDC2	SMARCB1	0.948	1
PLXDC2	Amp_Xp11.4	0.948	1
PTCH1	RIMBP3	0.948	1
PTCH1	SLC6A14	0.948	1
PTCH1	TDG	0.948	1
PTCH1	ZNF521	0.948	1
RAI1	SLC6A14	0.948	1
RAI1	TDG	0.948	1
RAI1	ZNF521	0.948	1
RALB	3q-Del	0.948	1
RCN1	3q-Del	0.948	1
RIMBP3	SMARCB1	0.948	1
RIMBP3	13q-Del	0.948	1
RIMBP3	Amp_Xp11.4	0.948	1
RIN1	3q-Del	0.948	1
RNF113B	3q-Del	0.948	1
RNF144A	3q-Del	0.948	1
SLC6A14	SMARCB1	0.948	1
SLC6A14	Amp_Xp11.4	0.948	1
SMARCB1	ZNF521	0.948	1
TDG	Amp_Xp11.4	0.948	1
ZFYVE26	3q-Amp	0.948	1
ZNF521	Amp_Xp11.4	0.948	1
ZNHIT1	3q-Del	0.948	1
ADAM28	Del_11q21	0.949	1
C16orf78	Del_11q21	0.949	1
C9orf171	Del_11q21	0.949	1
CXorf23	Del_11q21	0.949	1
IMPA2	Del_11q21	0.949	1
INPP5E	Del_11q21	0.949	1
KIF16B	Del_11q21	0.949	1
NFE2L2	PTEN	0.949	1
OR10G3	Del_11q21	0.949	1
PHF10	Del_11q21	0.949	1
PTEN	Del_19p13.3	0.949	1
SCYL1	Del_11q21	0.949	1
SLC14A1	Del_11q21	0.949	1
SLC1A7	Del_11q21	0.949	1
SPATA13	Del_11q21	0.949	1
VCL	Del_11q21	0.949	1
5p-Amp	14q-Del	0.949	1
5q-Amp	Del_9p23	0.949	1
CSGALNACT2	Del_10q23.31	0.95	1
GPR50	21q-Del	0.95	1
KDELR3	Del_6q26	0.95	1
NTRK3	21q-Del	0.95	1
PLXDC2	21q-Del	0.95	1
PRKAG2	18q-Del	0.95	1
RIMBP3	21q-Del	0.95	1
SLC6A14	21q-Del	0.95	1
STAM	Del_6q26	0.95	1
10q-Del	Del_3p12.2	0.95	1
18q-Del	Amp_Xp22.2	0.95	1
8p-Del	9q-Del	0.95	1
CDKN2A	ZNF598	0.951	1
CSK	Del_13q12.13	0.951	1
CYP4F11	12q-Amp	0.951	1
ECHDC2	ZNF598	0.951	1
ECHDC2	Del_3p21.2	0.951	1
EDIL3	ZNF598	0.951	1
ENO1	ZNF598	0.951	1
ENO1	Del_1p31.1	0.951	1
ENO1	Del_3p21.2	0.951	1
FAM18B2	GALNT7	0.951	1
FZR1	ZNF598	0.951	1
GALNT7	TP53	0.951	1
HSPA2	ZNF598	0.951	1
KLK10	ZNF598	0.951	1
KLK10	Del_3p21.2	0.951	1
KRAS	ZNF598	0.951	1
MET	12p-Amp	0.951	1
MTOR	3p-Del	0.951	1
MYF6	ZNF598	0.951	1
MYF6	Del_1p31.1	0.951	1
MYF6	Del_3p21.2	0.951	1
PLXDC2	12q-Amp	0.951	1
PRODH	ZNF598	0.951	1
RIMBP3	12q-Amp	0.951	1
SMARCB1	TP53	0.951	1
ZNF521	12q-Amp	0.951	1
ZNF598	Xp-Del	0.951	1
ZNF814	Amp_7q31.2	0.951	1
Xp-Del	Del_1p31.1	0.951	1
ADAM28	ATM	0.952	1
ADAM28	NEFH	0.952	1
ADAM28	NF2	0.952	1
ARAP3	CSGALNACT2	0.952	1
ARAP3	DPCR1	0.952	1
ARHGAP33	CSGALNACT2	0.952	1
ARHGAP33	DPCR1	0.952	1
ATM	C16orf78	0.952	1
ATM	C9orf171	0.952	1
ATM	CXorf23	0.952	1
ATM	IMPA2	0.952	1
ATM	INPP5E	0.952	1
ATM	KIF16B	0.952	1
ATM	OR10G3	0.952	1
ATM	PHF10	0.952	1
ATM	SCYL1	0.952	1
ATM	SLC14A1	0.952	1
ATM	SMARCA4	0.952	1
ATM	SPATA13	0.952	1
ATM	TP53	0.952	1
ATM	VCL	0.952	1
C16orf78	NEFH	0.952	1
C16orf78	NF2	0.952	1
C9orf171	NEFH	0.952	1
C9orf171	NF2	0.952	1
CARKD	MTOR	0.952	1
CARKD	MUC5B	0.952	1
CDCA8	MTOR	0.952	1
CDCA8	MUC5B	0.952	1
CSGALNACT2	CSK	0.952	1
CSGALNACT2	EMG1	0.952	1
CSGALNACT2	FAM160B2	0.952	1
CSGALNACT2	ZNF532	0.952	1
CSGALNACT2	Amp_Xq11.2	0.952	1
CSK	DPCR1	0.952	1
CXorf23	NEFH	0.952	1
CXorf23	NF2	0.952	1
DPCR1	EMG1	0.952	1
DPCR1	FAM160B2	0.952	1
DPCR1	STXBP3	0.952	1
DPCR1	ZNF532	0.952	1
DPCR1	Amp_Xq11.2	0.952	1
DPYSL4	MTOR	0.952	1
DPYSL4	MUC5B	0.952	1
F2RL1	MTOR	0.952	1
F2RL1	MUC5B	0.952	1
FAM18B2	NEFH	0.952	1
FLCN	MTOR	0.952	1
FLCN	MUC5B	0.952	1
HNRNPM	Del_11q23.1	0.952	1
IFNB1	MTOR	0.952	1
IMPA2	NEFH	0.952	1
IMPA2	NF2	0.952	1
INPP5E	NEFH	0.952	1
INPP5E	NF2	0.952	1
KCNK1	MTOR	0.952	1
KCNK1	MUC5B	0.952	1
KDM6A	Amp_19p13.2	0.952	1
KIF16B	NEFH	0.952	1
KIF16B	NF2	0.952	1
MTOR	NEK8	0.952	1
MTOR	NKX2-1	0.952	1
MTOR	ONECUT2	0.952	1
MTOR	PDLIM4	0.952	1
MTOR	PRDX5	0.952	1
MTOR	RALB	0.952	1
MTOR	RCN1	0.952	1
MTOR	RIN1	0.952	1
MTOR	RNF113B	0.952	1
MTOR	RNF144A	0.952	1
MTOR	TMEM47	0.952	1
MTOR	ZNHIT1	0.952	1
MUC5B	NDUFA3	0.952	1
MUC5B	NEK8	0.952	1
MUC5B	NKX2-1	0.952	1
MUC5B	ONECUT2	0.952	1
MUC5B	PDLIM4	0.952	1
MUC5B	PRDX5	0.952	1
MUC5B	RALB	0.952	1
MUC5B	RCN1	0.952	1
MUC5B	RIN1	0.952	1
MUC5B	RNF113B	0.952	1
MUC5B	RNF144A	0.952	1
MUC5B	TMEM47	0.952	1
MUC5B	ZNHIT1	0.952	1
NEFH	OR10G3	0.952	1
NEFH	PHF10	0.952	1
NEFH	SCYL1	0.952	1
NEFH	SLC14A1	0.952	1
NEFH	SLC1A7	0.952	1
NEFH	SMARCA4	0.952	1
NEFH	SPATA13	0.952	1
NEFH	VCL	0.952	1
NF2	OR10G3	0.952	1
NF2	PHF10	0.952	1
NF2	SCYL1	0.952	1
NF2	SLC14A1	0.952	1
NF2	SLC1A7	0.952	1
NF2	SMARCA4	0.952	1
NF2	SPATA13	0.952	1
NF2	VCL	0.952	1
SETD2	Del_11q21	0.952	1
18p-Del	3q-Del	0.952	1
ARAP3	Del_9p21.3	0.953	1
ARHGAP33	Del_9p21.3	0.953	1
DPCR1	6p-Del	0.953	1
EMG1	Del_9p21.3	0.953	1
FAM160B2	Del_9p21.3	0.953	1
INPP5E	Del_3p12.2	0.953	1
VCL	Del_3p12.2	0.953	1
20p-Amp	Del_11q23.1	0.953	1
20q-Amp	Del_11q23.1	0.953	1
10q-Del	18p-Del	0.953	1
18q-Del	1q-Del	0.953	1
18q-Del	Del_3p21.2	0.953	1
1p-Del	9p-Del	0.953	1
Amp_Xq11.2	Del_9p21.3	0.953	1
ARHGAP33	17p-Del	0.954	1
CSK	17p-Del	0.954	1
FAM160B2	17p-Del	0.954	1
GALNT7	3q-Del	0.954	1
MUC5B	18q-Del	0.954	1
PRKAG2	18p-Del	0.954	1
PTCH1	3q-Del	0.954	1
SMARCA4	17p-Amp	0.954	1
SMARCB1	Amp_17q25.2	0.954	1
17p-Del	Amp_Xq11.2	0.954	1
18p-Del	Amp_Xp22.2	0.954	1
3q-Del	Amp_Xp11.4	0.954	1
ADAM28	SMARCA4	0.955	1
ARAP3	16q-Amp	0.955	1
ARAP3	8p-Del	0.955	1
C16orf78	SMARCA4	0.955	1
C9orf171	SMARCA4	0.955	1
CDKN2A	KDM6A	0.955	1
CDKN2A	NF1	0.955	1
CDKN2A	NFE2L2	0.955	1
CDKN2A	Del_19p13.3	0.955	1
CSGALNACT2	17q-Amp	0.955	1
CSGALNACT2	1p-Del	0.955	1
CXorf23	SMARCA4	0.955	1
CYP4F11	EGFR	0.955	1
CYP4F11	KDELR3	0.955	1
CYP4F11	PRKAG2	0.955	1
CYP4F11	STAM	0.955	1
CYP4F11	Amp_Xp22.2	0.955	1
ECHDC2	KDM6A	0.955	1
ECHDC2	NF1	0.955	1
ECHDC2	NFE2L2	0.955	1
ECHDC2	Del_19p13.3	0.955	1
EDIL3	KDM6A	0.955	1
EDIL3	NF1	0.955	1
EDIL3	NFE2L2	0.955	1
EDIL3	Del_19p13.3	0.955	1
EGFR	FGFR3	0.955	1
EGFR	GPR50	0.955	1
EGFR	NTRK3	0.955	1
EGFR	NUDT11	0.955	1
EGFR	PLXDC2	0.955	1
EGFR	RIMBP3	0.955	1
EGFR	SLC6A14	0.955	1
EGFR	TDG	0.955	1
EGFR	ZNF521	0.955	1
ENO1	KDM6A	0.955	1
ENO1	NF1	0.955	1
ENO1	NFE2L2	0.955	1
ENO1	Del_19p13.3	0.955	1
FAM160B2	16q-Amp	0.955	1
FGFR3	KDELR3	0.955	1
FGFR3	STAM	0.955	1
FGFR3	Amp_Xp22.2	0.955	1
FZR1	KDM6A	0.955	1
FZR1	NF1	0.955	1
FZR1	NFE2L2	0.955	1
FZR1	Del_19p13.3	0.955	1
GPR50	KDELR3	0.955	1
GPR50	PRKAG2	0.955	1
GPR50	STAM	0.955	1
GPR50	Amp_Xp22.2	0.955	1
HSPA2	KDM6A	0.955	1
HSPA2	NF1	0.955	1
HSPA2	NFE2L2	0.955	1
HSPA2	Del_19p13.3	0.955	1
IMPA2	SMARCA4	0.955	1
INPP5E	SMARCA4	0.955	1
KDELR3	NUDT11	0.955	1
KDELR3	PLXDC2	0.955	1
KDELR3	SLC6A14	0.955	1
KDELR3	TDG	0.955	1
KDELR3	ZNF521	0.955	1
KDM6A	KLK10	0.955	1
KDM6A	KRAS	0.955	1
KDM6A	MYF6	0.955	1
KDM6A	Xp-Del	0.955	1
KIF16B	SMARCA4	0.955	1
KLK10	NF1	0.955	1
KLK10	NFE2L2	0.955	1
KLK10	Del_19p13.3	0.955	1
KRAS	NF1	0.955	1
KRAS	NFE2L2	0.955	1
KRAS	Del_19p13.3	0.955	1
MTOR	5p-Amp	0.955	1
MTOR	5q-Amp	0.955	1
MYF6	NFE2L2	0.955	1
MYF6	Del_19p13.3	0.955	1
NF1	SETD2	0.955	1
NF1	5p-Amp	0.955	1
NF1	5q-Amp	0.955	1
NF1	Xp-Del	0.955	1
NF1	Del_3p12.2	0.955	1
NFE2L2	PRODH	0.955	1
NFE2L2	SETD2	0.955	1
NFE2L2	Xp-Del	0.955	1
NTRK3	PRKAG2	0.955	1
NTRK3	STAM	0.955	1
NTRK3	Amp_Xp22.2	0.955	1
NUDT11	PRKAG2	0.955	1
NUDT11	STAM	0.955	1
NUDT11	Amp_Xp22.2	0.955	1
OR10G3	SMARCA4	0.955	1
PHF10	SMARCA4	0.955	1
PLXDC2	PRKAG2	0.955	1
PLXDC2	STAM	0.955	1
PLXDC2	Amp_Xp22.2	0.955	1
PRKAG2	RIMBP3	0.955	1
PRKAG2	SLC6A14	0.955	1
PRKAG2	TDG	0.955	1
PRKAG2	ZNF521	0.955	1
PRODH	Del_19p13.3	0.955	1
RIMBP3	Amp_Xp22.2	0.955	1
SCYL1	SMARCA4	0.955	1
SLC14A1	SMARCA4	0.955	1
SLC1A7	SMARCA4	0.955	1
SLC6A14	STAM	0.955	1
SLC6A14	Amp_Xp22.2	0.955	1
SMARCA4	SPATA13	0.955	1
SMARCA4	VCL	0.955	1
STAM	TDG	0.955	1
STAM	ZNF521	0.955	1
SYNE1	6q-Del	0.955	1
TDG	Amp_Xp22.2	0.955	1
ZNF521	Amp_Xp22.2	0.955	1
5p-Amp	Amp_19p13.2	0.955	1
5q-Amp	Amp_19p13.2	0.955	1
6q-Del	Del_4q34.3	0.955	1
Del_6q22.31	Del_19p13.3	0.955	1
EGFR	3p-Del	0.956	1
KDELR3	Del_6q22.31	0.956	1
KDM6A	3p-Amp	0.956	1
MUC5B	Del_6q26	0.956	1
NF1	3p-Amp	0.956	1
NF2	3q-Del	0.956	1
ZNF814	7q-Amp	0.956	1
17p-Amp	21q-Del	0.956	1
5q-Amp	Del_14q31.1	0.956	1
21q-Del	Del_9p21.3	0.956	1
ARHGAP33	Del_1q43	0.957	1
CDKN2A	Amp_17q25.2	0.957	1
CSK	Del_1q43	0.957	1
CSK	Del_13q14.2	0.957	1
ECHDC2	Del_3p26.3	0.957	1
FZR1	Del_3p26.3	0.957	1
KLK10	Del_3p26.3	0.957	1
MYF6	Del_3p26.3	0.957	1
NTRK3	20p-Amp	0.957	1
NTRK3	20q-Amp	0.957	1
PBRM1	VCL	0.957	1
PLXDC2	20p-Amp	0.957	1
PLXDC2	20q-Amp	0.957	1
PRKAG2	Del_1p36.31	0.957	1
PRODH	Amp_17q25.2	0.957	1
RAI1	6q-Del	0.957	1
RIMBP3	20p-Amp	0.957	1
RIMBP3	20q-Amp	0.957	1
TDG	20p-Amp	0.957	1
TDG	20q-Amp	0.957	1
ZNF814	7p-Amp	0.957	1
12p-Amp	18q-Del	0.957	1
3q-Del	Del_14q31.1	0.957	1
9q-Del	Del_11q21	0.957	1
Xp-Del	Amp_17q25.2	0.957	1
ADAM28	STAG2	0.958	1
ARAP3	PTCH1	0.958	1
ARAP3	RAI1	0.958	1
ARAP3	SMARCB1	0.958	1
ARAP3	Amp_Xp11.4	0.958	1
ARAP3	Del_9p23	0.958	1
ARHGAP33	PTCH1	0.958	1
ARHGAP33	RAI1	0.958	1
ARHGAP33	Amp_Xp11.4	0.958	1
ARHGAP33	Del_9p23	0.958	1
C16orf78	STAG2	0.958	1
C9orf171	STAG2	0.958	1
CARKD	KDM5C	0.958	1
CARKD	SYNE1	0.958	1
CARKD	3q-Amp	0.958	1
CARKD	Del_4q34.3	0.958	1
CDCA8	KDM5C	0.958	1
CDCA8	SYNE1	0.958	1
CDCA8	3q-Amp	0.958	1
CDCA8	Del_4q34.3	0.958	1
CSGALNACT2	SYNE1	0.958	1
CSGALNACT2	16p-Amp	0.958	1
CSGALNACT2	3q-Amp	0.958	1
CSGALNACT2	10q-Del	0.958	1
CSK	GALNT7	0.958	1
CSK	PTCH1	0.958	1
CSK	RAI1	0.958	1
CSK	SMARCB1	0.958	1
CSK	Amp_Xp11.4	0.958	1
CXorf23	STAG2	0.958	1
DPYSL4	3q-Amp	0.958	1
DPYSL4	Del_4q34.3	0.958	1
EMG1	GALNT7	0.958	1
EMG1	PTCH1	0.958	1
EMG1	RAI1	0.958	1
EMG1	SMARCB1	0.958	1
EMG1	Amp_Xp11.4	0.958	1
EMG1	Del_9p23	0.958	1
F2RL1	KDM5C	0.958	1
F2RL1	SYNE1	0.958	1
F2RL1	3q-Amp	0.958	1
F2RL1	Del_4q34.3	0.958	1
FAM160B2	GALNT7	0.958	1
FAM160B2	PTCH1	0.958	1
FAM160B2	RAI1	0.958	1
FAM160B2	SMARCB1	0.958	1
FAM160B2	Amp_Xp11.4	0.958	1
FAM160B2	Del_9p23	0.958	1
FLCN	KDM5C	0.958	1
FLCN	SYNE1	0.958	1
FLCN	3q-Amp	0.958	1
FLCN	Del_4q34.3	0.958	1
GALNT7	STXBP3	0.958	1
GALNT7	ZNF532	0.958	1
GALNT7	Amp_Xq11.2	0.958	1
IFNB1	KDM5C	0.958	1
IFNB1	SYNE1	0.958	1
IFNB1	3q-Amp	0.958	1
IFNB1	Del_4q34.3	0.958	1
IMPA2	STAG2	0.958	1
INPP5E	STAG2	0.958	1
KCNK1	KDM5C	0.958	1
KCNK1	3q-Amp	0.958	1
KCNK1	Del_4q34.3	0.958	1
KDM5C	NDUFA3	0.958	1
KDM5C	NEK8	0.958	1
KDM5C	NKX2-1	0.958	1
KDM5C	ONECUT2	0.958	1
KDM5C	PDLIM4	0.958	1
KDM5C	PRDX5	0.958	1
KDM5C	RALB	0.958	1
KDM5C	RCN1	0.958	1
KDM5C	RIN1	0.958	1
KDM5C	RNF113B	0.958	1
KDM5C	RNF144A	0.958	1
KDM5C	TMEM47	0.958	1
KDM5C	ZNHIT1	0.958	1
KIF16B	STAG2	0.958	1
NDUFA3	3q-Amp	0.958	1
NDUFA3	Del_4q34.3	0.958	1
NEK8	SYNE1	0.958	1
NEK8	3q-Amp	0.958	1
NEK8	Del_4q34.3	0.958	1
NKX2-1	SYNE1	0.958	1
NKX2-1	Del_4q34.3	0.958	1
ONECUT2	SYNE1	0.958	1
ONECUT2	3q-Amp	0.958	1
ONECUT2	Del_4q34.3	0.958	1
OR10G3	STAG2	0.958	1
PDLIM4	SYNE1	0.958	1
PDLIM4	3q-Amp	0.958	1
PDLIM4	Del_4q34.3	0.958	1
PHF10	STAG2	0.958	1
PRDX5	SYNE1	0.958	1
PRDX5	3q-Amp	0.958	1
PRDX5	Del_4q34.3	0.958	1
PRKAG2	Del_14q31.1	0.958	1
PTCH1	STXBP3	0.958	1
PTCH1	ZNF532	0.958	1
PTCH1	Amp_Xq11.2	0.958	1
PTEN	ZFYVE26	0.958	1
RAI1	STXBP3	0.958	1
RAI1	ZNF532	0.958	1
RAI1	Amp_Xq11.2	0.958	1
RALB	SYNE1	0.958	1
RALB	3q-Amp	0.958	1
RALB	Del_4q34.3	0.958	1
RCN1	SYNE1	0.958	1
RCN1	3q-Amp	0.958	1
RCN1	Del_4q34.3	0.958	1
RIN1	SYNE1	0.958	1
RIN1	3q-Amp	0.958	1
RNF113B	SYNE1	0.958	1
RNF113B	3q-Amp	0.958	1
RNF113B	Del_4q34.3	0.958	1
RNF144A	SYNE1	0.958	1
RNF144A	3q-Amp	0.958	1
RNF144A	Del_4q34.3	0.958	1
SCYL1	STAG2	0.958	1
SLC14A1	STAG2	0.958	1
SLC1A7	STAG2	0.958	1
SMARCA4	16q-Amp	0.958	1
SMARCB1	STXBP3	0.958	1
SMARCB1	ZNF532	0.958	1
SMARCB1	Amp_Xq11.2	0.958	1
SPATA13	STAG2	0.958	1
STAG2	VCL	0.958	1
STXBP3	Amp_Xp11.4	0.958	1
SYNE1	TMEM47	0.958	1
SYNE1	ZNHIT1	0.958	1
TMEM47	3q-Amp	0.958	1
TMEM47	Del_4q34.3	0.958	1
ZNF532	Amp_Xp11.4	0.958	1
ZNHIT1	3q-Amp	0.958	1
ZNHIT1	Del_4q34.3	0.958	1
Amp_Xp22.2	Del_14q31.1	0.958	1
Amp_Xq11.2	Del_9p23	0.958	1
ENO1	6q-Del	0.959	1
FZR1	6q-Del	0.959	1
GALNT7	MUC5B	0.959	1
KLK10	6q-Del	0.959	1
MUC5B	PTCH1	0.959	1
MUC5B	SMARCB1	0.959	1
MYF6	6q-Del	0.959	1
PRODH	6q-Del	0.959	1
ZNF598	Del_11q23.1	0.959	1
ZNF814	Del_11q21	0.959	1
5p-Amp	Del_3p12.2	0.959	1
1q-Del	Del_19p13.3	0.959	1
6q-Del	Xp-Del	0.959	1
9p-Del	Del_1q43	0.959	1
ADCY8	CDKN2A	0.96	1
ADCY8	EDIL3	0.96	1
ADCY8	ENO1	0.96	1
ADCY8	FZR1	0.96	1
ADCY8	HSPA2	0.96	1
ADCY8	KLK10	0.96	1
ADCY8	MYF6	0.96	1
ADCY8	PRODH	0.96	1
ADCY8	Xp-Del	0.96	1
CDKN2A	ZFYVE26	0.96	1
ECHDC2	ZFYVE26	0.96	1
EDIL3	ZFYVE26	0.96	1
ENO1	ZFYVE26	0.96	1
FZR1	ZFYVE26	0.96	1
HSPA2	ZFYVE26	0.96	1
KRAS	ZFYVE26	0.96	1
MET	12q-Amp	0.96	1
MYF6	ZFYVE26	0.96	1
NF2	Amp_17q25.2	0.96	1
PRODH	ZFYVE26	0.96	1
TP53	Del_9p21.3	0.96	1
ZFYVE26	Xp-Del	0.96	1
ZNF814	Del_8p23.2	0.96	1
12p-Amp	Del_11q21	0.96	1
9p-Del	Del_11q21	0.96	1
Amp_3q26.32	Amp_Xp22.2	0.96	1
Del_4q34.3	Del_6q22.31	0.96	1
ADAM28	ZNF814	0.961	1
ADAM28	Del_16q23.3	0.961	1
C16orf78	ZNF814	0.961	1
C16orf78	Del_16q23.3	0.961	1
C9orf171	Del_16q23.3	0.961	1
CXorf23	ZNF814	0.961	1
CXorf23	Del_16q23.3	0.961	1
HNRNPM	MET	0.961	1
IMPA2	ZNF814	0.961	1
IMPA2	Del_16q23.3	0.961	1
INPP5E	ZNF814	0.961	1
INPP5E	Del_16q23.3	0.961	1
KIF16B	ZNF814	0.961	1
KIF16B	Del_16q23.3	0.961	1
MTOR	Del_3p14.1	0.961	1
NF2	5p-Amp	0.961	1
NF2	5q-Amp	0.961	1
OR10G3	ZNF814	0.961	1
OR10G3	Del_16q23.3	0.961	1
PHF10	ZNF814	0.961	1
PHF10	Del_16q23.3	0.961	1
PTEN	13q-Del	0.961	1
SCYL1	ZNF814	0.961	1
SCYL1	Del_16q23.3	0.961	1
SLC14A1	ZNF814	0.961	1
SLC14A1	Del_16q23.3	0.961	1
SLC1A7	ZNF814	0.961	1
SPATA13	ZNF814	0.961	1
VCL	ZNF814	0.961	1
VCL	Del_16q23.3	0.961	1
ZFYVE26	Amp_2q32.1	0.961	1
ZFYVE26	Amp_19p13.2	0.961	1
ZNF814	18p-Del	0.961	1
2q-Amp	Del_9p23	0.961	1
ARAP3	5p-Amp	0.962	1
ARAP3	5q-Amp	0.962	1
ATM	MUC5B	0.962	1
CARKD	PTEN	0.962	1
CDCA8	PTEN	0.962	1
DPYSL4	PTEN	0.962	1
F2RL1	PTEN	0.962	1
FLCN	PTEN	0.962	1
IFNB1	PTEN	0.962	1
KCNK1	PTEN	0.962	1
NDUFA3	PTEN	0.962	1
NEK8	PTEN	0.962	1
NF1	PBRM1	0.962	1
NKX2-1	PTEN	0.962	1
ONECUT2	PTEN	0.962	1
PBRM1	Del_8p23.2	0.962	1
PDLIM4	PTEN	0.962	1
PRDX5	PTEN	0.962	1
PTEN	RCN1	0.962	1
PTEN	RIN1	0.962	1
PTEN	RNF113B	0.962	1
PTEN	RNF144A	0.962	1
PTEN	TMEM47	0.962	1
PTEN	TP53	0.962	1
PTEN	ZNHIT1	0.962	1
SETD2	Amp_Xq11.2	0.962	1
SYNE1	Del_1p36.31	0.962	1
ATM	Del_16q23.3	0.963	1
CYP4F11	FGFR3	0.963	1
CYP4F11	GPR50	0.963	1
CYP4F11	NTRK3	0.963	1
CYP4F11	NUDT11	0.963	1
CYP4F11	PLXDC2	0.963	1
CYP4F11	RIMBP3	0.963	1
CYP4F11	SLC6A14	0.963	1
CYP4F11	TDG	0.963	1
CYP4F11	ZNF521	0.963	1
FGFR3	GPR50	0.963	1
FGFR3	NTRK3	0.963	1
FGFR3	NUDT11	0.963	1
FGFR3	PLXDC2	0.963	1
FGFR3	RIMBP3	0.963	1
FGFR3	SLC6A14	0.963	1
FGFR3	TDG	0.963	1
FGFR3	ZNF521	0.963	1
GPR50	NTRK3	0.963	1
GPR50	NUDT11	0.963	1
GPR50	PLXDC2	0.963	1
GPR50	RIMBP3	0.963	1
GPR50	SLC6A14	0.963	1
GPR50	TDG	0.963	1
GPR50	ZNF521	0.963	1
NEFH	ZNF814	0.963	1
NEFH	Del_16q23.3	0.963	1
NTRK3	NUDT11	0.963	1
NTRK3	PLXDC2	0.963	1
NTRK3	RIMBP3	0.963	1
NTRK3	SLC6A14	0.963	1
NTRK3	TDG	0.963	1
NTRK3	ZNF521	0.963	1
NUDT11	PLXDC2	0.963	1
NUDT11	RIMBP3	0.963	1
NUDT11	SLC6A14	0.963	1
NUDT11	TDG	0.963	1
NUDT11	ZNF521	0.963	1
PLXDC2	RIMBP3	0.963	1
PLXDC2	TDG	0.963	1
PLXDC2	ZNF521	0.963	1
RIMBP3	SLC6A14	0.963	1
RIMBP3	TDG	0.963	1
RIMBP3	ZNF521	0.963	1
SLC6A14	TDG	0.963	1
SLC6A14	ZNF521	0.963	1
SMARCA4	3q-Del	0.963	1
TDG	ZNF521	0.963	1
17q-Amp	21q-Del	0.963	1
13q-Del	Del_19p13.3	0.963	1
18p-Del	1q-Del	0.963	1
ADAM28	HNRNPM	0.964	1
ADAM28	PIK3CA	0.964	1
ARAP3	EGFR	0.964	1
ARAP3	KDELR3	0.964	1
ARAP3	PRKAG2	0.964	1
ARAP3	STAM	0.964	1
ARAP3	Amp_Xp22.2	0.964	1
ARHGAP33	EGFR	0.964	1
ARHGAP33	PRKAG2	0.964	1
ARHGAP33	STAM	0.964	1
ARHGAP33	Amp_Xp22.2	0.964	1
C16orf78	HNRNPM	0.964	1
C16orf78	PIK3CA	0.964	1
C9orf171	HNRNPM	0.964	1
C9orf171	PIK3CA	0.964	1
CARKD	Amp_2q32.1	0.964	1
CARKD	Amp_19p13.2	0.964	1
CDCA8	Amp_19p13.2	0.964	1
CDKN2A	CSGALNACT2	0.964	1
CDKN2A	DPCR1	0.964	1
CSGALNACT2	ECHDC2	0.964	1
CSGALNACT2	EDIL3	0.964	1
CSGALNACT2	ENO1	0.964	1
CSGALNACT2	FZR1	0.964	1
CSGALNACT2	HSPA2	0.964	1
CSGALNACT2	KLK10	0.964	1
CSGALNACT2	KRAS	0.964	1
CSGALNACT2	MYF6	0.964	1
CSGALNACT2	PRODH	0.964	1
CSGALNACT2	Xp-Del	0.964	1
CSK	EGFR	0.964	1
CSK	KDELR3	0.964	1
CSK	PRKAG2	0.964	1
CSK	STAM	0.964	1
CSK	Amp_Xp22.2	0.964	1
CXorf23	HNRNPM	0.964	1
CXorf23	PIK3CA	0.964	1
DPCR1	ECHDC2	0.964	1
DPCR1	EDIL3	0.964	1
DPCR1	ENO1	0.964	1
DPCR1	FZR1	0.964	1
DPCR1	HSPA2	0.964	1
DPCR1	KLK10	0.964	1
DPCR1	KRAS	0.964	1
DPCR1	MYF6	0.964	1
DPCR1	PRODH	0.964	1
DPCR1	Xp-Del	0.964	1
DPYSL4	Amp_2q32.1	0.964	1
DPYSL4	Amp_19p13.2	0.964	1
EGFR	EMG1	0.964	1
EGFR	FAM160B2	0.964	1
EGFR	STXBP3	0.964	1
EGFR	ZNF532	0.964	1
EGFR	Amp_Xq11.2	0.964	1
EMG1	KDELR3	0.964	1
EMG1	PRKAG2	0.964	1
EMG1	STAM	0.964	1
EMG1	Amp_Xp22.2	0.964	1
F2RL1	Amp_2q32.1	0.964	1
F2RL1	Amp_19p13.2	0.964	1
FAM160B2	KDELR3	0.964	1
FAM160B2	PRKAG2	0.964	1
FAM160B2	STAM	0.964	1
FAM160B2	Amp_Xp22.2	0.964	1
FAM18B2	STAM	0.964	1
FLCN	Amp_2q32.1	0.964	1
FLCN	Amp_19p13.2	0.964	1
HNRNPM	IMPA2	0.964	1
HNRNPM	INPP5E	0.964	1
HNRNPM	KIF16B	0.964	1
HNRNPM	OR10G3	0.964	1
HNRNPM	SCYL1	0.964	1
HNRNPM	SLC14A1	0.964	1
HNRNPM	SLC1A7	0.964	1
HNRNPM	SPATA13	0.964	1
HNRNPM	VCL	0.964	1
IFNB1	Amp_2q32.1	0.964	1
IFNB1	Amp_19p13.2	0.964	1
INPP5E	PIK3CA	0.964	1
KCNK1	Amp_2q32.1	0.964	1
KCNK1	Amp_19p13.2	0.964	1
KDELR3	STXBP3	0.964	1
KDELR3	ZNF532	0.964	1
KDELR3	Amp_Xq11.2	0.964	1
NDUFA3	Amp_2q32.1	0.964	1
NDUFA3	Amp_19p13.2	0.964	1
NEK8	Amp_2q32.1	0.964	1
NEK8	Amp_19p13.2	0.964	1
NKX2-1	Amp_19p13.2	0.964	1
ONECUT2	Amp_2q32.1	0.964	1
ONECUT2	Amp_19p13.2	0.964	1
OR10G3	PIK3CA	0.964	1
PDLIM4	Amp_2q32.1	0.964	1
PDLIM4	Amp_19p13.2	0.964	1
PHF10	PIK3CA	0.964	1
PIK3CA	SLC14A1	0.964	1
PIK3CA	VCL	0.964	1
PRDX5	Amp_2q32.1	0.964	1
PRDX5	Amp_19p13.2	0.964	1
PRKAG2	STXBP3	0.964	1
PRKAG2	TP53	0.964	1
PRKAG2	ZNF532	0.964	1
PRKAG2	Amp_Xq11.2	0.964	1
RALB	Amp_2q32.1	0.964	1
RALB	Amp_19p13.2	0.964	1
RCN1	Amp_2q32.1	0.964	1
RCN1	Amp_19p13.2	0.964	1
RIN1	Amp_2q32.1	0.964	1
RIN1	Amp_19p13.2	0.964	1
RNF113B	Amp_2q32.1	0.964	1
RNF113B	Amp_19p13.2	0.964	1
RNF144A	Amp_2q32.1	0.964	1
RNF144A	Amp_19p13.2	0.964	1
STAM	STXBP3	0.964	1
STAM	TP53	0.964	1
STAM	ZNF532	0.964	1
STAM	Amp_Xq11.2	0.964	1
STXBP3	Amp_Xp22.2	0.964	1
TMEM47	Amp_2q32.1	0.964	1
TMEM47	Amp_19p13.2	0.964	1
ZNF532	Amp_Xp22.2	0.964	1
ZNHIT1	Amp_2q32.1	0.964	1
ZNHIT1	Amp_19p13.2	0.964	1
ARHGAP33	1q-Del	0.965	1
ARHGAP33	9q-Del	0.965	1
CARKD	3p-Amp	0.965	1
CDCA8	3p-Amp	0.965	1
CSK	1q-Del	0.965	1
CYP4F11	18q-Del	0.965	1
DPYSL4	3p-Amp	0.965	1
ECHDC2	Del_10q23.31	0.965	1
EMG1	9q-Del	0.965	1
F2RL1	3p-Amp	0.965	1
FAM160B2	9q-Del	0.965	1
FGFR3	18q-Del	0.965	1
FLCN	3p-Amp	0.965	1
GPR50	Amp_7q31.2	0.965	1
HNRNPM	Del_11q21	0.965	1
IFNB1	3p-Amp	0.965	1
KCNK1	3p-Amp	0.965	1
MYF6	Del_10q23.31	0.965	1
NDUFA3	3p-Amp	0.965	1
NEK8	3p-Amp	0.965	1
NTRK3	18q-Del	0.965	1
ONECUT2	3p-Amp	0.965	1
PDLIM4	3p-Amp	0.965	1
PLXDC2	Amp_7q31.2	0.965	1
PRDX5	3p-Amp	0.965	1
PRODH	Del_10q23.31	0.965	1
RALB	3p-Amp	0.965	1
RCN1	3p-Amp	0.965	1
RIN1	3p-Amp	0.965	1
RNF113B	3p-Amp	0.965	1
RNF144A	3p-Amp	0.965	1
TDG	18q-Del	0.965	1
TMEM47	3p-Amp	0.965	1
ZNF521	Amp_7q31.2	0.965	1
ZNHIT1	3p-Amp	0.965	1
18q-Del	21q-Del	0.965	1
9q-Del	Amp_Xq11.2	0.965	1
Xp-Del	Del_10q23.31	0.965	1
ARAP3	9p-Del	0.966	1
ARHGAP33	12p-Amp	0.966	1
ARHGAP33	9p-Del	0.966	1
CSGALNACT2	PTEN	0.966	1
CSGALNACT2	Del_13q12.13	0.966	1
EMG1	9p-Del	0.966	1
FAM160B2	12p-Amp	0.966	1
FAM160B2	9p-Del	0.966	1
NF1	Del_3p14.1	0.966	1
NF1	Del_11q23.1	0.966	1
NFE2L2	Del_11q23.1	0.966	1
PTEN	3q-Del	0.966	1
SMARCB1	Del_10q23.31	0.966	1
STXBP3	Del_3p12.2	0.966	1
TP53	8p-Del	0.966	1
ZNF532	12p-Amp	0.966	1
12p-Amp	Amp_Xq11.2	0.966	1
1p-Del	Del_14q31.1	0.966	1
9p-Del	Amp_Xq11.2	0.966	1
ADAM28	ZNF598	0.967	1
C16orf78	ZNF598	0.967	1
C9orf171	ZNF598	0.967	1
CARKD	2q-Amp	0.967	1
CSGALNACT2	17p-Amp	0.967	1
CSK	13q-Del	0.967	1
CXorf23	ZNF598	0.967	1
DPYSL4	2q-Amp	0.967	1
ENO1	6p-Del	0.967	1
F2RL1	2q-Amp	0.967	1
FLCN	2q-Amp	0.967	1
IFNB1	2q-Amp	0.967	1
IMPA2	ZNF598	0.967	1
INPP5E	ZNF598	0.967	1
KCNK1	2q-Amp	0.967	1
KIF16B	ZNF598	0.967	1
KLK10	6p-Del	0.967	1
MET	20p-Amp	0.967	1
MET	20q-Amp	0.967	1
MUC5B	Del_6q22.31	0.967	1
MYF6	6p-Del	0.967	1
NDUFA3	2q-Amp	0.967	1
NEK8	2q-Amp	0.967	1
NF1	Del_3p21.2	0.967	1
NF2	12p-Amp	0.967	1
ONECUT2	2q-Amp	0.967	1
OR10G3	ZNF598	0.967	1
PDLIM4	2q-Amp	0.967	1
PRDX5	2q-Amp	0.967	1
PRKAG2	14q-Del	0.967	1
PRODH	6p-Del	0.967	1
RALB	2q-Amp	0.967	1
RCN1	2q-Amp	0.967	1
RIN1	2q-Amp	0.967	1
RNF113B	2q-Amp	0.967	1
RNF144A	2q-Amp	0.967	1
SCYL1	ZNF598	0.967	1
SLC14A1	ZNF598	0.967	1
SLC1A7	ZNF598	0.967	1
SMARCA4	ZNF814	0.967	1
TMEM47	2q-Amp	0.967	1
TP53	Amp_19p13.2	0.967	1
VCL	ZNF598	0.967	1
ZFYVE26	2q-Amp	0.967	1
ZNHIT1	2q-Amp	0.967	1
12p-Amp	18p-Del	0.967	1
12q-Amp	Del_11q21	0.967	1
14q-Del	1p-Del	0.967	1
18q-Del	Amp_7q31.2	0.967	1
21q-Del	Del_8p23.2	0.967	1
6p-Del	Xp-Del	0.967	1
ARAP3	21q-Del	0.968	1
CDKN2A	GALNT7	0.968	1
CDKN2A	PTCH1	0.968	1
CDKN2A	RAI1	0.968	1
CDKN2A	SMARCB1	0.968	1
CDKN2A	17q-Amp	0.968	1
CDKN2A	Amp_Xp11.4	0.968	1
CYP4F11	18p-Del	0.968	1
ECHDC2	GALNT7	0.968	1
ECHDC2	PTCH1	0.968	1
ECHDC2	RAI1	0.968	1
ECHDC2	SMARCB1	0.968	1
ECHDC2	Amp_Xp11.4	0.968	1
EDIL3	GALNT7	0.968	1
EDIL3	RAI1	0.968	1
EDIL3	SMARCB1	0.968	1
EDIL3	Amp_Xp11.4	0.968	1
ENO1	GALNT7	0.968	1
ENO1	PTCH1	0.968	1
ENO1	RAI1	0.968	1
ENO1	SMARCB1	0.968	1
ENO1	1p-Del	0.968	1
ENO1	Amp_Xp11.4	0.968	1
FZR1	GALNT7	0.968	1
FZR1	PTCH1	0.968	1
FZR1	RAI1	0.968	1
FZR1	SMARCB1	0.968	1
FZR1	Amp_Xp11.4	0.968	1
GALNT7	HSPA2	0.968	1
GALNT7	KDM5C	0.968	1
GALNT7	KLK10	0.968	1
GALNT7	KRAS	0.968	1
GALNT7	MYF6	0.968	1
GALNT7	3q-Amp	0.968	1
GALNT7	Xp-Del	0.968	1
GALNT7	Del_4q34.3	0.968	1
GPR50	7p-Amp	0.968	1
GPR50	7q-Amp	0.968	1
HNRNPM	NEFH	0.968	1
HNRNPM	NF2	0.968	1
HSPA2	RAI1	0.968	1
HSPA2	SMARCB1	0.968	1
HSPA2	Amp_Xp11.4	0.968	1
KDM5C	PTCH1	0.968	1
KDM5C	RAI1	0.968	1
KLK10	PTCH1	0.968	1
KLK10	RAI1	0.968	1
KLK10	SMARCB1	0.968	1
KLK10	Amp_Xp11.4	0.968	1
KRAS	PTCH1	0.968	1
KRAS	RAI1	0.968	1
KRAS	SMARCB1	0.968	1
KRAS	Amp_Xp11.4	0.968	1
MYF6	PTCH1	0.968	1
MYF6	RAI1	0.968	1
MYF6	SMARCB1	0.968	1
MYF6	Amp_Xp11.4	0.968	1
NTRK3	18p-Del	0.968	1
PLXDC2	7p-Amp	0.968	1
PLXDC2	7q-Amp	0.968	1
PRODH	PTCH1	0.968	1
PRODH	RAI1	0.968	1
PRODH	17q-Amp	0.968	1
PRODH	Amp_Xp11.4	0.968	1
PTCH1	Xp-Del	0.968	1
RAI1	3q-Amp	0.968	1
RAI1	6p-Del	0.968	1
RAI1	Xp-Del	0.968	1
SMARCB1	SYNE1	0.968	1
SMARCB1	Xp-Del	0.968	1
STXBP3	21q-Del	0.968	1
TDG	18p-Del	0.968	1
ZNF521	7p-Amp	0.968	1
ZNF521	7q-Amp	0.968	1
17q-Amp	Xp-Del	0.968	1
2q-Amp	5p-Amp	0.968	1
2q-Amp	5q-Amp	0.968	1
1p-Del	Xp-Del	0.968	1
8p-Del	Amp_5q35.1	0.968	1
Xp-Del	Amp_Xp11.4	0.968	1
CDKN2A	Del_8p23.2	0.969	1
CSGALNACT2	Amp_2q32.1	0.969	1
DPCR1	Amp_19p13.2	0.969	1
ECHDC2	Del_8p23.2	0.969	1
ENO1	Del_8p23.2	0.969	1
FAM160B2	12q-Amp	0.969	1
KLK10	Del_8p23.2	0.969	1
ZNF532	12q-Amp	0.969	1
12q-Amp	Amp_Xq11.2	0.969	1
ADAM28	KDM6A	0.97	1
ADAM28	NF1	0.97	1
ADAM28	NFE2L2	0.97	1
ADAM28	Del_19p13.3	0.97	1
ARAP3	CYP4F11	0.97	1
ARAP3	FGFR3	0.97	1
ARAP3	GPR50	0.97	1
ARAP3	NTRK3	0.97	1
ARAP3	NUDT11	0.97	1
ARAP3	PLXDC2	0.97	1
ARAP3	RIMBP3	0.97	1
ARAP3	SLC6A14	0.97	1
ARAP3	TDG	0.97	1
ARAP3	ZNF521	0.97	1
ARHGAP33	CYP4F11	0.97	1
ARHGAP33	FGFR3	0.97	1
ARHGAP33	GPR50	0.97	1
ARHGAP33	NUDT11	0.97	1
ARHGAP33	PLXDC2	0.97	1
ARHGAP33	RIMBP3	0.97	1
ARHGAP33	SLC6A14	0.97	1
ARHGAP33	TDG	0.97	1
ARHGAP33	ZNF521	0.97	1
C16orf78	KDM6A	0.97	1
C16orf78	NF1	0.97	1
C16orf78	NFE2L2	0.97	1
C16orf78	Del_19p13.3	0.97	1
C9orf171	KDM6A	0.97	1
C9orf171	NF1	0.97	1
C9orf171	NFE2L2	0.97	1
C9orf171	Del_19p13.3	0.97	1
CARKD	Del_11q23.1	0.97	1
CDCA8	Del_11q23.1	0.97	1
CSGALNACT2	16q-Amp	0.97	1
CSK	CYP4F11	0.97	1
CSK	FGFR3	0.97	1
CSK	GPR50	0.97	1
CSK	NTRK3	0.97	1
CSK	NUDT11	0.97	1
CSK	PLXDC2	0.97	1
CSK	RIMBP3	0.97	1
CSK	SLC6A14	0.97	1
CSK	TDG	0.97	1
CSK	ZNF521	0.97	1
CXorf23	KDM6A	0.97	1
CXorf23	NF1	0.97	1
CXorf23	NFE2L2	0.97	1
CXorf23	Del_19p13.3	0.97	1
CYP4F11	EMG1	0.97	1
CYP4F11	FAM160B2	0.97	1
CYP4F11	STXBP3	0.97	1
CYP4F11	ZNF532	0.97	1
DPYSL4	Del_11q23.1	0.97	1
ECHDC2	10q-Del	0.97	1
EMG1	FGFR3	0.97	1
EMG1	GPR50	0.97	1
EMG1	NTRK3	0.97	1
EMG1	NUDT11	0.97	1
EMG1	PLXDC2	0.97	1
EMG1	RIMBP3	0.97	1
EMG1	SLC6A14	0.97	1
EMG1	TDG	0.97	1
EMG1	ZNF521	0.97	1
ENO1	16p-Amp	0.97	1
ENO1	10q-Del	0.97	1
F2RL1	Del_11q23.1	0.97	1
FAM160B2	FGFR3	0.97	1
FAM160B2	GPR50	0.97	1
FAM160B2	NTRK3	0.97	1
FAM160B2	NUDT11	0.97	1
FAM160B2	PLXDC2	0.97	1
FAM160B2	RIMBP3	0.97	1
FAM160B2	SLC6A14	0.97	1
FAM160B2	TDG	0.97	1
FAM160B2	ZNF521	0.97	1
FGFR3	STXBP3	0.97	1
FGFR3	ZNF532	0.97	1
FGFR3	Amp_Xq11.2	0.97	1
FLCN	Del_11q23.1	0.97	1
GPR50	STXBP3	0.97	1
GPR50	ZNF532	0.97	1
GPR50	Amp_Xq11.2	0.97	1
IFNB1	Del_11q23.1	0.97	1
IMPA2	KDM6A	0.97	1
IMPA2	NF1	0.97	1
IMPA2	NFE2L2	0.97	1
IMPA2	Del_19p13.3	0.97	1
INPP5E	KDM6A	0.97	1
INPP5E	NF1	0.97	1
INPP5E	NFE2L2	0.97	1
INPP5E	Del_19p13.3	0.97	1
KCNK1	Del_11q23.1	0.97	1
KDM6A	KIF16B	0.97	1
KDM6A	OR10G3	0.97	1
KDM6A	PHF10	0.97	1
KDM6A	SCYL1	0.97	1
KDM6A	SLC14A1	0.97	1
KDM6A	SLC1A7	0.97	1
KDM6A	SPATA13	0.97	1
KDM6A	VCL	0.97	1
KIF16B	NF1	0.97	1
KIF16B	NFE2L2	0.97	1
KIF16B	Del_19p13.3	0.97	1
MUC5B	Amp_Xp22.2	0.97	1
MYF6	10q-Del	0.97	1
NDUFA3	Del_11q23.1	0.97	1
NEK8	Del_11q23.1	0.97	1
NF1	OR10G3	0.97	1
NF1	PHF10	0.97	1
NF1	SCYL1	0.97	1
NF1	SLC14A1	0.97	1
NF1	SPATA13	0.97	1
NF1	VCL	0.97	1
NFE2L2	OR10G3	0.97	1
NFE2L2	PHF10	0.97	1
NFE2L2	SCYL1	0.97	1
NFE2L2	SLC14A1	0.97	1
NFE2L2	SLC1A7	0.97	1
NFE2L2	SPATA13	0.97	1
NFE2L2	VCL	0.97	1
NKX2-1	Del_11q23.1	0.97	1
NTRK3	STXBP3	0.97	1
NTRK3	ZNF532	0.97	1
NTRK3	Amp_Xq11.2	0.97	1
NUDT11	STXBP3	0.97	1
NUDT11	ZNF532	0.97	1
NUDT11	Amp_Xq11.2	0.97	1
ONECUT2	Del_11q23.1	0.97	1
OR10G3	Del_19p13.3	0.97	1
PDLIM4	Del_11q23.1	0.97	1
PHF10	Del_19p13.3	0.97	1
PIK3CA	Del_8p23.2	0.97	1
PLXDC2	STXBP3	0.97	1
PLXDC2	ZNF532	0.97	1
PLXDC2	Amp_Xq11.2	0.97	1
PRDX5	Del_11q23.1	0.97	1
PRODH	16p-Amp	0.97	1
PRODH	10q-Del	0.97	1
RALB	Del_11q23.1	0.97	1
RCN1	Del_11q23.1	0.97	1
RIMBP3	STXBP3	0.97	1
RIMBP3	ZNF532	0.97	1
RIMBP3	Amp_Xq11.2	0.97	1
RIN1	Del_11q23.1	0.97	1
RNF113B	Del_11q23.1	0.97	1
RNF144A	Del_11q23.1	0.97	1
SCYL1	Del_19p13.3	0.97	1
SLC14A1	Del_19p13.3	0.97	1
SLC1A7	Del_19p13.3	0.97	1
SLC6A14	STXBP3	0.97	1
SLC6A14	ZNF532	0.97	1
SLC6A14	Amp_Xq11.2	0.97	1
SMARCB1	17q-Amp	0.97	1
SPATA13	Del_19p13.3	0.97	1
STXBP3	TDG	0.97	1
STXBP3	ZNF521	0.97	1
TDG	ZNF532	0.97	1
TDG	Amp_Xq11.2	0.97	1
TMEM47	Del_11q23.1	0.97	1
VCL	Del_19p13.3	0.97	1
ZNF521	Amp_Xq11.2	0.97	1
ZNF598	Del_11q21	0.97	1
ZNHIT1	Del_11q23.1	0.97	1
16p-Amp	21q-Del	0.97	1
16p-Amp	Xp-Del	0.97	1
17q-Amp	Amp_Xp11.4	0.97	1
10q-Del	Xp-Del	0.97	1
14q-Del	Del_13q12.13	0.97	1
21q-Del	Amp_7q31.2	0.97	1
21q-Del	Del_9p23	0.97	1
CSGALNACT2	3p-Amp	0.971	1
CSGALNACT2	Del_1q43	0.971	1
CSGALNACT2	Del_13q14.2	0.971	1
FAM18B2	3p-Amp	0.971	1
NFE2L2	20p-Amp	0.971	1
NFE2L2	20q-Amp	0.971	1
PLXDC2	VHL	0.971	1
PRKAG2	Amp_17q25.2	0.971	1
RIMBP3	VHL	0.971	1
STAG2	ZNF814	0.971	1
STAG2	Del_9p23	0.971	1
STAG2	Del_16q23.3	0.971	1
TP53	Del_9p23	0.971	1
VHL	14q-Del	0.971	1
20p-Amp	Del_19p13.3	0.971	1
20q-Amp	Del_19p13.3	0.971	1
Amp_Xp11.4	Del_8p23.2	0.971	1
Del_13q12.13	Del_14q31.1	0.971	1
C16orf78	Amp_7q31.2	0.972	1
GPR50	Del_6q26	0.972	1
IMPA2	Amp_7q31.2	0.972	1
INPP5E	Amp_7q31.2	0.972	1
MET	NF1	0.972	1
MET	Del_19p13.3	0.972	1
MUC5B	PTEN	0.972	1
MYF6	Del_2q37.3	0.972	1
PHF10	Amp_7q31.2	0.972	1
PRODH	Del_2q37.3	0.972	1
SCYL1	Amp_7q31.2	0.972	1
SMARCB1	16p-Amp	0.972	1
SMARCB1	10q-Del	0.972	1
VCL	Amp_7q31.2	0.972	1
ZNF598	18q-Del	0.972	1
ZNF814	Del_14q31.1	0.972	1
16p-Amp	Amp_Xp11.4	0.972	1
Xp-Del	Del_2q37.3	0.972	1
Del_9p21.3	Del_16q23.3	0.972	1
Del_11q23.1	Del_13q14.2	0.972	1
ADAM28	ADCY8	0.973	1
ADAM28	ZFYVE26	0.973	1
ADCY8	C16orf78	0.973	1
ADCY8	C9orf171	0.973	1
ADCY8	CXorf23	0.973	1
ADCY8	IMPA2	0.973	1
ADCY8	INPP5E	0.973	1
ADCY8	KIF16B	0.973	1
ADCY8	PHF10	0.973	1
ADCY8	SCYL1	0.973	1
ADCY8	SLC14A1	0.973	1
ADCY8	SLC1A7	0.973	1
ADCY8	SPATA13	0.973	1
ADCY8	VCL	0.973	1
ARHGAP33	20p-Amp	0.973	1
ARHGAP33	20q-Amp	0.973	1
C16orf78	ZFYVE26	0.973	1
C9orf171	ZFYVE26	0.973	1
CARKD	MET	0.973	1
CDCA8	MET	0.973	1
CDKN2A	EGFR	0.973	1
CDKN2A	KDELR3	0.973	1
CDKN2A	PRKAG2	0.973	1
CDKN2A	STAM	0.973	1
CDKN2A	Amp_Xp22.2	0.973	1
CXorf23	ZFYVE26	0.973	1
DPYSL4	MET	0.973	1
ECHDC2	EGFR	0.973	1
ECHDC2	KDELR3	0.973	1
ECHDC2	PRKAG2	0.973	1
ECHDC2	STAM	0.973	1
ECHDC2	Amp_Xp22.2	0.973	1
EDIL3	EGFR	0.973	1
EDIL3	KDELR3	0.973	1
EDIL3	PRKAG2	0.973	1
EDIL3	STAM	0.973	1
EDIL3	Amp_Xp22.2	0.973	1
EGFR	ENO1	0.973	1
EGFR	FZR1	0.973	1
EGFR	HSPA2	0.973	1
EGFR	KLK10	0.973	1
EGFR	KRAS	0.973	1
EGFR	MYF6	0.973	1
EGFR	PRODH	0.973	1
EGFR	Xp-Del	0.973	1
EMG1	20p-Amp	0.973	1
EMG1	20q-Amp	0.973	1
ENO1	KDELR3	0.973	1
ENO1	PRKAG2	0.973	1
ENO1	STAM	0.973	1
ENO1	Amp_Xp22.2	0.973	1
F2RL1	MET	0.973	1
FAM18B2	ZNF814	0.973	1
FLCN	MET	0.973	1
FZR1	KDELR3	0.973	1
FZR1	STAM	0.973	1
FZR1	Amp_Xp22.2	0.973	1
GPR50	Amp_3q26.32	0.973	1
HSPA2	KDELR3	0.973	1
HSPA2	PRKAG2	0.973	1
HSPA2	STAM	0.973	1
HSPA2	Amp_Xp22.2	0.973	1
IFNB1	MET	0.973	1
IMPA2	ZFYVE26	0.973	1
INPP5E	ZFYVE26	0.973	1
KCNK1	MET	0.973	1
KDELR3	KLK10	0.973	1
KDELR3	KRAS	0.973	1
KDELR3	MYF6	0.973	1
KDELR3	6q-Del	0.973	1
KDELR3	Xp-Del	0.973	1
KDM5C	Del_3p14.1	0.973	1
KIF16B	ZFYVE26	0.973	1
KLK10	PRKAG2	0.973	1
KLK10	STAM	0.973	1
KLK10	Amp_Xp22.2	0.973	1
KRAS	PRKAG2	0.973	1
KRAS	STAM	0.973	1
KRAS	Amp_Xp22.2	0.973	1
MET	NDUFA3	0.973	1
MET	NEK8	0.973	1
MET	NKX2-1	0.973	1
MET	ONECUT2	0.973	1
MET	PDLIM4	0.973	1
MET	PRDX5	0.973	1
MET	RALB	0.973	1
MET	RCN1	0.973	1
MET	RIN1	0.973	1
MET	RNF113B	0.973	1
MET	RNF144A	0.973	1
MET	TMEM47	0.973	1
MET	ZNHIT1	0.973	1
MYF6	PRKAG2	0.973	1
MYF6	STAM	0.973	1
MYF6	Amp_Xp22.2	0.973	1
NF2	ZNF598	0.973	1
NF2	12q-Amp	0.973	1
NTRK3	Amp_3q26.32	0.973	1
OR10G3	ZFYVE26	0.973	1
PHF10	ZFYVE26	0.973	1
PLXDC2	Amp_3q26.32	0.973	1
PRKAG2	PRODH	0.973	1
PRKAG2	Xp-Del	0.973	1
PRODH	STAM	0.973	1
PRODH	Amp_Xp22.2	0.973	1
PTEN	Del_6q26	0.973	1
RIMBP3	Amp_3q26.32	0.973	1
SCYL1	ZFYVE26	0.973	1
SLC14A1	ZFYVE26	0.973	1
SLC1A7	ZFYVE26	0.973	1
SLC6A14	Amp_3q26.32	0.973	1
SPATA13	ZFYVE26	0.973	1
STAM	6q-Del	0.973	1
STAM	Xp-Del	0.973	1
STXBP3	20p-Amp	0.973	1
STXBP3	20q-Amp	0.973	1
SYNE1	18q-Del	0.973	1
TDG	Amp_3q26.32	0.973	1
VCL	ZFYVE26	0.973	1
3q-Del	Del_1q43	0.973	1
Xp-Del	Amp_Xp22.2	0.973	1
Amp_17q25.2	Del_19p13.3	0.973	1
ATM	SYNE1	0.974	1
C16orf78	7p-Amp	0.974	1
C16orf78	7q-Amp	0.974	1
CARKD	Del_11q21	0.974	1
CDCA8	Del_11q21	0.974	1
CSGALNACT2	2q-Amp	0.974	1
DPYSL4	Del_11q21	0.974	1
EDIL3	VHL	0.974	1
F2RL1	Del_11q21	0.974	1
FLCN	Del_11q21	0.974	1
GALNT7	PTEN	0.974	1
IFNB1	Del_11q21	0.974	1
IMPA2	7p-Amp	0.974	1
IMPA2	7q-Amp	0.974	1
INPP5E	7p-Amp	0.974	1
INPP5E	7q-Amp	0.974	1
KCNK1	Del_11q21	0.974	1
NDUFA3	Del_11q21	0.974	1
NEFH	3q-Amp	0.974	1
NEK8	Del_11q21	0.974	1
NF1	Del_3p26.3	0.974	1
NKX2-1	Del_11q21	0.974	1
ONECUT2	Del_11q21	0.974	1
PDLIM4	Del_11q21	0.974	1
PHF10	7p-Amp	0.974	1
PHF10	7q-Amp	0.974	1
PRDX5	Del_11q21	0.974	1
PTEN	Amp_Xp11.4	0.974	1
RAI1	Del_2q37.3	0.974	1
RALB	Del_11q21	0.974	1
RCN1	Del_11q21	0.974	1
RIN1	Del_11q21	0.974	1
RNF113B	Del_11q21	0.974	1
RNF144A	Del_11q21	0.974	1
TMEM47	Del_11q21	0.974	1
VCL	7p-Amp	0.974	1
VCL	7q-Amp	0.974	1
ZNHIT1	Del_11q21	0.974	1
Xp-Del	Del_13q12.13	0.974	1
CDKN2A	Del_9p21.3	0.975	1
ENO1	17p-Del	0.975	1
ENO1	Del_9p21.3	0.975	1
FAM18B2	NUDT11	0.975	1
FAM18B2	SLC6A14	0.975	1
FAM18B2	TDG	0.975	1
FAM18B2	ZNF521	0.975	1
FAM18B2	2q-Amp	0.975	1
FGFR3	TP53	0.975	1
FZR1	Del_9p21.3	0.975	1
GPR50	TP53	0.975	1
GPR50	Del_6q22.31	0.975	1
MTOR	Del_9p21.3	0.975	1
MUC5B	17p-Amp	0.975	1
MYF6	17p-Del	0.975	1
NF1	Del_11q21	0.975	1
NFE2L2	Del_11q21	0.975	1
NTRK3	TP53	0.975	1
PRODH	17p-Amp	0.975	1
RIMBP3	TP53	0.975	1
SLC6A14	TP53	0.975	1
STAG2	5p-Amp	0.975	1
STAG2	5q-Amp	0.975	1
TP53	ZNF521	0.975	1
ZNF814	16q-Amp	0.975	1
ZNF814	Del_16q23.3	0.975	1
16p-Amp	Del_11q21	0.975	1
17p-Amp	Xp-Del	0.975	1
5p-Amp	Del_3p26.3	0.975	1
5q-Amp	Del_3p26.3	0.975	1
5q-Amp	Del_4q34.3	0.975	1
17p-Del	Xp-Del	0.975	1
6q-Del	Del_19p13.3	0.975	1
ADAM28	CSGALNACT2	0.976	1
ADAM28	DPCR1	0.976	1
ARAP3	ARHGAP33	0.976	1
ARAP3	CSK	0.976	1
ARAP3	EMG1	0.976	1
ARAP3	FAM160B2	0.976	1
ARAP3	STXBP3	0.976	1
ARAP3	ZNF532	0.976	1
ARAP3	Amp_Xq11.2	0.976	1
ARHGAP33	CSK	0.976	1
ARHGAP33	EMG1	0.976	1
ARHGAP33	FAM160B2	0.976	1
ARHGAP33	STXBP3	0.976	1
ARHGAP33	ZNF532	0.976	1
ARHGAP33	Amp_Xq11.2	0.976	1
ATM	CARKD	0.976	1
ATM	CDCA8	0.976	1
ATM	DPYSL4	0.976	1
ATM	F2RL1	0.976	1
ATM	FLCN	0.976	1
ATM	IFNB1	0.976	1
ATM	KCNK1	0.976	1
ATM	NDUFA3	0.976	1
ATM	NEK8	0.976	1
ATM	NKX2-1	0.976	1
ATM	PRDX5	0.976	1
ATM	RALB	0.976	1
ATM	RCN1	0.976	1
ATM	RIN1	0.976	1
ATM	RNF113B	0.976	1
ATM	RNF144A	0.976	1
ATM	TMEM47	0.976	1
ATM	ZNHIT1	0.976	1
C16orf78	CSGALNACT2	0.976	1
C16orf78	DPCR1	0.976	1
C16orf78	Del_6q26	0.976	1
C9orf171	CSGALNACT2	0.976	1
C9orf171	DPCR1	0.976	1
CARKD	NEFH	0.976	1
CARKD	NF2	0.976	1
CDCA8	NEFH	0.976	1
CDCA8	NF2	0.976	1
CDKN2A	8p-Del	0.976	1
CSGALNACT2	CXorf23	0.976	1
CSGALNACT2	IMPA2	0.976	1
CSGALNACT2	INPP5E	0.976	1
CSGALNACT2	KIF16B	0.976	1
CSGALNACT2	OR10G3	0.976	1
CSGALNACT2	PHF10	0.976	1
CSGALNACT2	SCYL1	0.976	1
CSGALNACT2	SLC14A1	0.976	1
CSGALNACT2	SLC1A7	0.976	1
CSGALNACT2	SPATA13	0.976	1
CSGALNACT2	VCL	0.976	1
CSK	EMG1	0.976	1
CSK	FAM160B2	0.976	1
CSK	STXBP3	0.976	1
CSK	ZNF532	0.976	1
CSK	Amp_Xq11.2	0.976	1
CXorf23	DPCR1	0.976	1
DPCR1	IMPA2	0.976	1
DPCR1	INPP5E	0.976	1
DPCR1	KIF16B	0.976	1
DPCR1	OR10G3	0.976	1
DPCR1	PHF10	0.976	1
DPCR1	SCYL1	0.976	1
DPCR1	SLC14A1	0.976	1
DPCR1	SLC1A7	0.976	1
DPCR1	SPATA13	0.976	1
DPCR1	VCL	0.976	1
DPYSL4	NEFH	0.976	1
DPYSL4	NF2	0.976	1
ECHDC2	8p-Del	0.976	1
EMG1	FAM160B2	0.976	1
EMG1	STXBP3	0.976	1
EMG1	ZNF532	0.976	1
EMG1	Amp_Xq11.2	0.976	1
ENO1	16q-Amp	0.976	1
ENO1	8p-Del	0.976	1
F2RL1	NEFH	0.976	1
F2RL1	NF2	0.976	1
FAM160B2	STXBP3	0.976	1
FAM160B2	ZNF532	0.976	1
FAM160B2	Amp_Xq11.2	0.976	1
FLCN	NEFH	0.976	1
FLCN	NF2	0.976	1
HNRNPM	STAG2	0.976	1
IFNB1	NEFH	0.976	1
IFNB1	NF2	0.976	1
KCNK1	NEFH	0.976	1
KCNK1	NF2	0.976	1
KIF16B	Del_6q26	0.976	1
MUC5B	Amp_2q32.1	0.976	1
NDUFA3	NEFH	0.976	1
NDUFA3	NF2	0.976	1
NEFH	NEK8	0.976	1
NEFH	NKX2-1	0.976	1
NEFH	ONECUT2	0.976	1
NEFH	PDLIM4	0.976	1
NEFH	PRDX5	0.976	1
NEFH	RALB	0.976	1
NEFH	RCN1	0.976	1
NEFH	RIN1	0.976	1
NEFH	RNF113B	0.976	1
NEFH	RNF144A	0.976	1
NEFH	TMEM47	0.976	1
NEFH	ZNHIT1	0.976	1
NEK8	NF2	0.976	1
NF1	3p-Del	0.976	1
NF2	NKX2-1	0.976	1
NF2	ONECUT2	0.976	1
NF2	PDLIM4	0.976	1
NF2	PRDX5	0.976	1
NF2	RALB	0.976	1
NF2	RCN1	0.976	1
NF2	RIN1	0.976	1
NF2	RNF113B	0.976	1
NF2	RNF144A	0.976	1
NF2	TMEM47	0.976	1
NF2	ZNHIT1	0.976	1
PHF10	Del_6q26	0.976	1
PRODH	16q-Amp	0.976	1
PTCH1	Amp_19p13.2	0.976	1
SLC1A7	Del_6q26	0.976	1
STXBP3	ZNF532	0.976	1
STXBP3	Amp_Xq11.2	0.976	1
TP53	Del_8p23.2	0.976	1
ZNF532	Amp_Xq11.2	0.976	1
ZNF598	18p-Del	0.976	1
16q-Amp	Xp-Del	0.976	1
7q-Amp	21q-Del	0.976	1
1q-Del	9q-Del	0.976	1
Amp_19p13.2	Amp_Xp11.4	0.976	1
ATM	VHL	0.977	1
CARKD	SMARCA4	0.977	1
CDCA8	SMARCA4	0.977	1
CDKN2A	CYP4F11	0.977	1
CDKN2A	FGFR3	0.977	1
CDKN2A	GPR50	0.977	1
CDKN2A	NTRK3	0.977	1
CDKN2A	NUDT11	0.977	1
CDKN2A	PLXDC2	0.977	1
CDKN2A	RIMBP3	0.977	1
CDKN2A	TDG	0.977	1
CDKN2A	ZNF521	0.977	1
CSGALNACT2	Del_6q26	0.977	1
CYP4F11	ECHDC2	0.977	1
CYP4F11	EDIL3	0.977	1
CYP4F11	ENO1	0.977	1
CYP4F11	FZR1	0.977	1
CYP4F11	HSPA2	0.977	1
CYP4F11	KLK10	0.977	1
CYP4F11	KRAS	0.977	1
CYP4F11	MYF6	0.977	1
CYP4F11	PRODH	0.977	1
CYP4F11	Xp-Del	0.977	1
DPCR1	Del_6q26	0.977	1
DPYSL4	SMARCA4	0.977	1
ECHDC2	FGFR3	0.977	1
ECHDC2	GPR50	0.977	1
ECHDC2	NTRK3	0.977	1
ECHDC2	NUDT11	0.977	1
ECHDC2	PLXDC2	0.977	1
ECHDC2	SLC6A14	0.977	1
ECHDC2	TDG	0.977	1
ECHDC2	ZNF521	0.977	1
EDIL3	FGFR3	0.977	1
EDIL3	GPR50	0.977	1
EDIL3	NUDT11	0.977	1
EDIL3	PLXDC2	0.977	1
EDIL3	RIMBP3	0.977	1
EDIL3	SLC6A14	0.977	1
EDIL3	TDG	0.977	1
EDIL3	ZNF521	0.977	1
EGFR	SYNE1	0.977	1
ENO1	FGFR3	0.977	1
ENO1	NTRK3	0.977	1
ENO1	NUDT11	0.977	1
ENO1	PLXDC2	0.977	1
ENO1	RIMBP3	0.977	1
ENO1	SLC6A14	0.977	1
ENO1	TDG	0.977	1
ENO1	ZNF521	0.977	1
ENO1	Del_1q43	0.977	1
F2RL1	SMARCA4	0.977	1
FGFR3	FZR1	0.977	1
FGFR3	HSPA2	0.977	1
FGFR3	KLK10	0.977	1
FGFR3	KRAS	0.977	1
FGFR3	MYF6	0.977	1
FGFR3	PRODH	0.977	1
FGFR3	Xp-Del	0.977	1
FLCN	SMARCA4	0.977	1
FZR1	GPR50	0.977	1
FZR1	NTRK3	0.977	1
FZR1	NUDT11	0.977	1
FZR1	PLXDC2	0.977	1
FZR1	RIMBP3	0.977	1
FZR1	SLC6A14	0.977	1
FZR1	TDG	0.977	1
FZR1	ZNF521	0.977	1
GPR50	HSPA2	0.977	1
GPR50	KLK10	0.977	1
GPR50	KRAS	0.977	1
GPR50	MYF6	0.977	1
GPR50	PRODH	0.977	1
GPR50	3q-Del	0.977	1
GPR50	Xp-Del	0.977	1
HSPA2	NTRK3	0.977	1
HSPA2	NUDT11	0.977	1
HSPA2	PLXDC2	0.977	1
HSPA2	RIMBP3	0.977	1
HSPA2	SLC6A14	0.977	1
HSPA2	TDG	0.977	1
HSPA2	ZNF521	0.977	1
IFNB1	SMARCA4	0.977	1
KCNK1	SMARCA4	0.977	1
KDELR3	3q-Amp	0.977	1
KDELR3	Del_4q34.3	0.977	1
KLK10	NTRK3	0.977	1
KLK10	NUDT11	0.977	1
KLK10	PLXDC2	0.977	1
KLK10	RIMBP3	0.977	1
KLK10	SLC6A14	0.977	1
KLK10	TDG	0.977	1
KLK10	ZNF521	0.977	1
KRAS	NTRK3	0.977	1
KRAS	NUDT11	0.977	1
KRAS	PLXDC2	0.977	1
KRAS	RIMBP3	0.977	1
KRAS	SLC6A14	0.977	1
KRAS	TDG	0.977	1
KRAS	ZNF521	0.977	1
MYF6	NTRK3	0.977	1
MYF6	NUDT11	0.977	1
MYF6	PLXDC2	0.977	1
MYF6	SLC6A14	0.977	1
MYF6	TDG	0.977	1
MYF6	ZNF521	0.977	1
MYF6	Del_1q43	0.977	1
NDUFA3	SMARCA4	0.977	1
NKX2-1	SMARCA4	0.977	1
NTRK3	Xp-Del	0.977	1
NUDT11	PRODH	0.977	1
NUDT11	Xp-Del	0.977	1
ONECUT2	SMARCA4	0.977	1
PDLIM4	SMARCA4	0.977	1
PLXDC2	PRODH	0.977	1
PLXDC2	Xp-Del	0.977	1
PRKAG2	SYNE1	0.977	1
PRODH	RIMBP3	0.977	1
PRODH	SLC6A14	0.977	1
PRODH	TDG	0.977	1
PRODH	ZNF521	0.977	1
RALB	SMARCA4	0.977	1
RCN1	SMARCA4	0.977	1
RIMBP3	Xp-Del	0.977	1
RIN1	SMARCA4	0.977	1
RNF113B	SMARCA4	0.977	1
RNF144A	SMARCA4	0.977	1
SLC6A14	Xp-Del	0.977	1
SMARCA4	TMEM47	0.977	1
SMARCA4	ZNHIT1	0.977	1
TDG	Xp-Del	0.977	1
ZNF521	Xp-Del	0.977	1
5q-Amp	7p-Amp	0.977	1
5q-Amp	Del_3p21.2	0.977	1
7p-Amp	Amp_5q35.1	0.977	1
10q-Del	18q-Del	0.977	1
Xp-Del	Del_1q43	0.977	1
Xp-Del	Del_13q14.2	0.977	1
ARAP3	18q-Del	0.978	1
ATM	NF1	0.978	1
ATM	NFE2L2	0.978	1
CSGALNACT2	1q-Del	0.978	1
ECHDC2	Del_3p14.1	0.978	1
EMG1	18q-Del	0.978	1
ENO1	Del_9p23	0.978	1
FAM160B2	18q-Del	0.978	1
FAM18B2	PIK3CA	0.978	1
FZR1	Del_9p23	0.978	1
GALNT7	3p-Amp	0.978	1
KLK10	Del_3p14.1	0.978	1
NEFH	NFE2L2	0.978	1
NEFH	20p-Amp	0.978	1
NEFH	20q-Amp	0.978	1
NEFH	Del_19p13.3	0.978	1
NF1	NF2	0.978	1
NF2	NFE2L2	0.978	1
NF2	20p-Amp	0.978	1
NF2	20q-Amp	0.978	1
RAI1	3p-Amp	0.978	1
SMARCB1	17p-Amp	0.978	1
SYNE1	18p-Del	0.978	1
7p-Amp	21q-Del	0.978	1
10q-Del	Del_9p21.3	0.978	1
18p-Del	Amp_7q31.2	0.978	1
18q-Del	Amp_Xq11.2	0.978	1
Del_9p23	Del_16q23.3	0.978	1
ADAM28	GALNT7	0.979	1
ADAM28	PTCH1	0.979	1
ADAM28	RAI1	0.979	1
ADAM28	SMARCB1	0.979	1
ADAM28	Amp_Xp11.4	0.979	1
C16orf78	GALNT7	0.979	1
C16orf78	PTCH1	0.979	1
C16orf78	RAI1	0.979	1
C16orf78	SMARCB1	0.979	1
C16orf78	Amp_Xp11.4	0.979	1
C16orf78	Del_14q31.1	0.979	1
C9orf171	GALNT7	0.979	1
C9orf171	PTCH1	0.979	1
C9orf171	RAI1	0.979	1
C9orf171	SMARCB1	0.979	1
C9orf171	Amp_Xp11.4	0.979	1
CARKD	STAG2	0.979	1
CDCA8	STAG2	0.979	1
CSGALNACT2	12p-Amp	0.979	1
CXorf23	GALNT7	0.979	1
CXorf23	PTCH1	0.979	1
CXorf23	RAI1	0.979	1
CXorf23	SMARCB1	0.979	1
CXorf23	Amp_Xp11.4	0.979	1
CYP4F11	MTOR	0.979	1
CYP4F11	Amp_5q35.1	0.979	1
DPYSL4	STAG2	0.979	1
F2RL1	STAG2	0.979	1
FLCN	STAG2	0.979	1
GALNT7	IMPA2	0.979	1
GALNT7	INPP5E	0.979	1
GALNT7	KIF16B	0.979	1
GALNT7	OR10G3	0.979	1
GALNT7	PHF10	0.979	1
GALNT7	SCYL1	0.979	1
GALNT7	SLC14A1	0.979	1
GALNT7	SPATA13	0.979	1
GALNT7	VCL	0.979	1
HNRNPM	Del_16q23.3	0.979	1
IFNB1	STAG2	0.979	1
IMPA2	PTCH1	0.979	1
IMPA2	RAI1	0.979	1
IMPA2	SMARCB1	0.979	1
IMPA2	Amp_Xp11.4	0.979	1
IMPA2	Del_1p36.31	0.979	1
IMPA2	Del_14q31.1	0.979	1
INPP5E	PTCH1	0.979	1
INPP5E	RAI1	0.979	1
INPP5E	SMARCB1	0.979	1
INPP5E	Amp_Xp11.4	0.979	1
INPP5E	Del_14q31.1	0.979	1
KCNK1	STAG2	0.979	1
KDELR3	Del_10q23.31	0.979	1
KDM6A	18q-Del	0.979	1
KIF16B	PTCH1	0.979	1
KIF16B	RAI1	0.979	1
KIF16B	SMARCB1	0.979	1
KIF16B	Amp_Xp11.4	0.979	1
KIF16B	Del_1p36.31	0.979	1
MTOR	PBRM1	0.979	1
MTOR	PLXDC2	0.979	1
MUC5B	NTRK3	0.979	1
MUC5B	NUDT11	0.979	1
MUC5B	PLXDC2	0.979	1
MUC5B	RIMBP3	0.979	1
MUC5B	16q-Amp	0.979	1
NDUFA3	STAG2	0.979	1
NEK8	STAG2	0.979	1
NF1	18q-Del	0.979	1
NFE2L2	18q-Del	0.979	1
NKX2-1	STAG2	0.979	1
NUDT11	Amp_5q35.1	0.979	1
ONECUT2	STAG2	0.979	1
OR10G3	PTCH1	0.979	1
OR10G3	RAI1	0.979	1
OR10G3	SMARCB1	0.979	1
OR10G3	Amp_Xp11.4	0.979	1
OR10G3	Del_14q31.1	0.979	1
PDLIM4	STAG2	0.979	1
PHF10	PTCH1	0.979	1
PHF10	RAI1	0.979	1
PHF10	SMARCB1	0.979	1
PHF10	Amp_Xp11.4	0.979	1
PHF10	Del_1p36.31	0.979	1
PHF10	Del_6q22.31	0.979	1
PIK3CA	Del_16q23.3	0.979	1
PRDX5	STAG2	0.979	1
PTCH1	SCYL1	0.979	1
PTCH1	SLC14A1	0.979	1
PTCH1	SLC1A7	0.979	1
PTCH1	SPATA13	0.979	1
PTCH1	VCL	0.979	1
PTEN	Del_6q22.31	0.979	1
RAI1	SCYL1	0.979	1
RAI1	SLC14A1	0.979	1
RAI1	SLC1A7	0.979	1
RAI1	SPATA13	0.979	1
RAI1	VCL	0.979	1
RALB	STAG2	0.979	1
RCN1	STAG2	0.979	1
RIN1	STAG2	0.979	1
RNF113B	STAG2	0.979	1
RNF144A	STAG2	0.979	1
SCYL1	SMARCB1	0.979	1
SCYL1	Amp_Xp11.4	0.979	1
SCYL1	Del_1p36.31	0.979	1
SCYL1	Del_14q31.1	0.979	1
SETD2	Del_3p14.1	0.979	1
SETD2	Del_11q23.1	0.979	1
SLC14A1	SMARCB1	0.979	1
SLC14A1	Amp_Xp11.4	0.979	1
SLC1A7	Amp_Xp11.4	0.979	1
SLC1A7	Del_6q22.31	0.979	1
SMARCB1	SPATA13	0.979	1
SMARCB1	VCL	0.979	1
SPATA13	Amp_Xp11.4	0.979	1
STAG2	TMEM47	0.979	1
STAG2	ZNHIT1	0.979	1
STAM	Del_10q23.31	0.979	1
TDG	Amp_5q35.1	0.979	1
VCL	Amp_Xp11.4	0.979	1
VCL	Del_14q31.1	0.979	1
ARAP3	18p-Del	0.98	1
CARKD	ZNF814	0.98	1
CARKD	Del_16q23.3	0.98	1
CDCA8	ZNF814	0.98	1
CDCA8	Del_16q23.3	0.98	1
DPYSL4	ZNF814	0.98	1
DPYSL4	Del_16q23.3	0.98	1
ECHDC2	5p-Amp	0.98	1
ECHDC2	5q-Amp	0.98	1
EDIL3	5p-Amp	0.98	1
EMG1	18p-Del	0.98	1
ENO1	5p-Amp	0.98	1
ENO1	5q-Amp	0.98	1
F2RL1	ZNF814	0.98	1
F2RL1	Del_16q23.3	0.98	1
FAM160B2	18p-Del	0.98	1
FLCN	ZNF814	0.98	1
FLCN	Del_16q23.3	0.98	1
FZR1	SETD2	0.98	1
HSPA2	5p-Amp	0.98	1
HSPA2	5q-Amp	0.98	1
IFNB1	ZNF814	0.98	1
IFNB1	Del_16q23.3	0.98	1
KCNK1	ZNF814	0.98	1
KCNK1	Del_16q23.3	0.98	1
KDELR3	6p-Del	0.98	1
MYF6	SETD2	0.98	1
MYF6	5p-Amp	0.98	1
MYF6	5q-Amp	0.98	1
NDUFA3	ZNF814	0.98	1
NDUFA3	Del_16q23.3	0.98	1
NEK8	ZNF814	0.98	1
NEK8	Del_16q23.3	0.98	1
NF1	SMARCA4	0.98	1
NKX2-1	ZNF814	0.98	1
NKX2-1	Del_16q23.3	0.98	1
ONECUT2	ZNF814	0.98	1
ONECUT2	Del_16q23.3	0.98	1
PDLIM4	ZNF814	0.98	1
PDLIM4	Del_16q23.3	0.98	1
PRDX5	ZNF814	0.98	1
PRDX5	Del_16q23.3	0.98	1
PRODH	5p-Amp	0.98	1
PRODH	5q-Amp	0.98	1
RALB	ZNF814	0.98	1
RALB	Del_16q23.3	0.98	1
RCN1	ZNF814	0.98	1
RCN1	Del_16q23.3	0.98	1
RIN1	ZNF814	0.98	1
RIN1	Del_16q23.3	0.98	1
RNF113B	ZNF814	0.98	1
RNF113B	Del_16q23.3	0.98	1
RNF144A	ZNF814	0.98	1
RNF144A	Del_16q23.3	0.98	1
SETD2	Xp-Del	0.98	1
SMARCA4	Del_19p13.3	0.98	1
SMARCB1	16q-Amp	0.98	1
STAM	6p-Del	0.98	1
TMEM47	ZNF814	0.98	1
TMEM47	Del_16q23.3	0.98	1
ZNF814	ZNHIT1	0.98	1
ZNHIT1	Del_16q23.3	0.98	1
5p-Amp	Del_9p23	0.98	1
10q-Del	Del_4q34.3	0.98	1
18p-Del	Amp_Xq11.2	0.98	1
9q-Del	Del_8p23.2	0.98	1
Amp_19p13.2	Del_9p21.3	0.98	1
CSGALNACT2	13q-Del	0.981	1
CSGALNACT2	Del_6q22.31	0.981	1
DPCR1	Del_6q22.31	0.981	1
ENO1	1q-Del	0.981	1
ENO1	9q-Del	0.981	1
FZR1	9q-Del	0.981	1
HNRNPM	16q-Amp	0.981	1
INPP5E	Amp_5q35.1	0.981	1
KIF16B	Amp_5q35.1	0.981	1
NF2	16p-Amp	0.981	1
PIK3CA	8p-Del	0.981	1
SETD2	Del_16q23.3	0.981	1
SLC14A1	Amp_5q35.1	0.981	1
SLC6A14	Del_1p31.1	0.981	1
VCL	Amp_5q35.1	0.981	1
ZNF814	14q-Del	0.981	1
12q-Amp	5p-Amp	0.981	1
12q-Amp	5q-Amp	0.981	1
17q-Amp	Amp_Xp22.2	0.981	1
13q-Del	Del_9p21.3	0.981	1
18p-Del	Del_14q31.1	0.981	1
1q-Del	Xp-Del	0.981	1
9q-Del	Xp-Del	0.981	1
ADAM28	EGFR	0.982	1
ADAM28	KDELR3	0.982	1
ADAM28	PRKAG2	0.982	1
ADAM28	STAM	0.982	1
ADAM28	Amp_Xp22.2	0.982	1
ARAP3	CDKN2A	0.982	1
ARAP3	ECHDC2	0.982	1
ARAP3	EDIL3	0.982	1
ARAP3	ENO1	0.982	1
ARAP3	FZR1	0.982	1
ARAP3	HSPA2	0.982	1
ARAP3	KLK10	0.982	1
ARAP3	KRAS	0.982	1
ARAP3	MYF6	0.982	1
ARAP3	PRODH	0.982	1
ARAP3	Xp-Del	0.982	1
ARAP3	Del_3p21.2	0.982	1
ARHGAP33	CDKN2A	0.982	1
ARHGAP33	ECHDC2	0.982	1
ARHGAP33	EDIL3	0.982	1
ARHGAP33	ENO1	0.982	1
ARHGAP33	FZR1	0.982	1
ARHGAP33	HSPA2	0.982	1
ARHGAP33	KLK10	0.982	1
ARHGAP33	KRAS	0.982	1
ARHGAP33	MYF6	0.982	1
ARHGAP33	Xp-Del	0.982	1
ATM	ZFYVE26	0.982	1
C16orf78	EGFR	0.982	1
C16orf78	KDELR3	0.982	1
C16orf78	PRKAG2	0.982	1
C16orf78	STAM	0.982	1
C16orf78	Amp_Xp22.2	0.982	1
C9orf171	EGFR	0.982	1
C9orf171	KDELR3	0.982	1
C9orf171	PRKAG2	0.982	1
C9orf171	STAM	0.982	1
C9orf171	Amp_Xp22.2	0.982	1
CARKD	HNRNPM	0.982	1
CARKD	PIK3CA	0.982	1
CDCA8	PIK3CA	0.982	1
CDKN2A	CSK	0.982	1
CDKN2A	EMG1	0.982	1
CDKN2A	FAM160B2	0.982	1
CDKN2A	STXBP3	0.982	1
CDKN2A	ZNF532	0.982	1
CDKN2A	Amp_Xq11.2	0.982	1
CSGALNACT2	21q-Del	0.982	1
CSK	EDIL3	0.982	1
CSK	ENO1	0.982	1
CSK	FZR1	0.982	1
CSK	HSPA2	0.982	1
CSK	KLK10	0.982	1
CSK	KRAS	0.982	1
CSK	MYF6	0.982	1
CSK	PRODH	0.982	1
CSK	Xp-Del	0.982	1
CXorf23	KDELR3	0.982	1
CXorf23	PRKAG2	0.982	1
CXorf23	STAM	0.982	1
CXorf23	Amp_Xp22.2	0.982	1
DPCR1	MET	0.982	1
DPYSL4	HNRNPM	0.982	1
DPYSL4	PIK3CA	0.982	1
ECHDC2	EMG1	0.982	1
ECHDC2	FAM160B2	0.982	1
ECHDC2	STXBP3	0.982	1
ECHDC2	ZNF532	0.982	1
ECHDC2	3p-Del	0.982	1
ECHDC2	Amp_Xq11.2	0.982	1
EDIL3	EMG1	0.982	1
EDIL3	FAM160B2	0.982	1
EDIL3	STXBP3	0.982	1
EDIL3	ZNF532	0.982	1
EDIL3	Amp_Xq11.2	0.982	1
EGFR	IMPA2	0.982	1
EGFR	INPP5E	0.982	1
EGFR	KIF16B	0.982	1
EGFR	OR10G3	0.982	1
EGFR	PHF10	0.982	1
EGFR	SCYL1	0.982	1
EGFR	SLC14A1	0.982	1
EGFR	SLC1A7	0.982	1
EGFR	SPATA13	0.982	1
EGFR	VCL	0.982	1
EMG1	ENO1	0.982	1
EMG1	FZR1	0.982	1
EMG1	HSPA2	0.982	1
EMG1	KLK10	0.982	1
EMG1	KRAS	0.982	1
EMG1	MYF6	0.982	1
EMG1	PRODH	0.982	1
EMG1	Xp-Del	0.982	1
ENO1	FAM160B2	0.982	1
ENO1	STXBP3	0.982	1
ENO1	ZNF532	0.982	1
ENO1	12p-Amp	0.982	1
ENO1	9p-Del	0.982	1
ENO1	Amp_Xq11.2	0.982	1
F2RL1	HNRNPM	0.982	1
FAM160B2	FZR1	0.982	1
FAM160B2	HSPA2	0.982	1
FAM160B2	KLK10	0.982	1
FAM160B2	KRAS	0.982	1
FAM160B2	MYF6	0.982	1
FAM160B2	PRODH	0.982	1
FAM160B2	Xp-Del	0.982	1
FLCN	HNRNPM	0.982	1
FLCN	PIK3CA	0.982	1
FZR1	STXBP3	0.982	1
FZR1	ZNF532	0.982	1
FZR1	9p-Del	0.982	1
HNRNPM	IFNB1	0.982	1
HNRNPM	KCNK1	0.982	1
HNRNPM	NDUFA3	0.982	1
HNRNPM	NEK8	0.982	1
HNRNPM	NKX2-1	0.982	1
HNRNPM	ONECUT2	0.982	1
HNRNPM	PDLIM4	0.982	1
HNRNPM	PRDX5	0.982	1
HNRNPM	RALB	0.982	1
HNRNPM	RCN1	0.982	1
HNRNPM	RIN1	0.982	1
HNRNPM	RNF113B	0.982	1
HNRNPM	RNF144A	0.982	1
HNRNPM	TMEM47	0.982	1
HNRNPM	ZNHIT1	0.982	1
HSPA2	STXBP3	0.982	1
HSPA2	ZNF532	0.982	1
HSPA2	Amp_Xq11.2	0.982	1
IFNB1	PIK3CA	0.982	1
IMPA2	KDELR3	0.982	1
IMPA2	PRKAG2	0.982	1
IMPA2	STAM	0.982	1
IMPA2	Amp_Xp22.2	0.982	1
IMPA2	Del_1p31.1	0.982	1
INPP5E	KDELR3	0.982	1
INPP5E	PRKAG2	0.982	1
INPP5E	STAM	0.982	1
INPP5E	Amp_Xp22.2	0.982	1
KCNK1	PIK3CA	0.982	1
KDELR3	KIF16B	0.982	1
KDELR3	OR10G3	0.982	1
KDELR3	PHF10	0.982	1
KDELR3	SCYL1	0.982	1
KDELR3	SLC14A1	0.982	1
KDELR3	SPATA13	0.982	1
KDELR3	VCL	0.982	1
KIF16B	PRKAG2	0.982	1
KIF16B	STAM	0.982	1
KIF16B	Amp_Xp22.2	0.982	1
KIF16B	Del_1p31.1	0.982	1
KLK10	STXBP3	0.982	1
KLK10	ZNF532	0.982	1
KLK10	Amp_Xq11.2	0.982	1
KRAS	STXBP3	0.982	1
KRAS	ZNF532	0.982	1
KRAS	Amp_Xq11.2	0.982	1
MYF6	STXBP3	0.982	1
MYF6	ZNF532	0.982	1
MYF6	12p-Amp	0.982	1
NDUFA3	PIK3CA	0.982	1
NEFH	ZFYVE26	0.982	1
NEK8	PIK3CA	0.982	1
NF1	18p-Del	0.982	1
NFE2L2	18p-Del	0.982	1
NKX2-1	PIK3CA	0.982	1
ONECUT2	PIK3CA	0.982	1
OR10G3	PRKAG2	0.982	1
OR10G3	STAM	0.982	1
OR10G3	Amp_Xp22.2	0.982	1
PDLIM4	PIK3CA	0.982	1
PHF10	PRKAG2	0.982	1
PHF10	STAM	0.982	1
PHF10	Amp_Xp22.2	0.982	1
PHF10	Del_1p31.1	0.982	1
PIK3CA	PRDX5	0.982	1
PIK3CA	RALB	0.982	1
PIK3CA	RCN1	0.982	1
PIK3CA	RIN1	0.982	1
PIK3CA	RNF113B	0.982	1
PIK3CA	RNF144A	0.982	1
PIK3CA	TMEM47	0.982	1
PIK3CA	ZNHIT1	0.982	1
PRKAG2	SLC14A1	0.982	1
PRKAG2	SLC1A7	0.982	1
PRKAG2	SPATA13	0.982	1
PRKAG2	VCL	0.982	1
PRODH	STXBP3	0.982	1
PRODH	ZNF532	0.982	1
PRODH	12p-Amp	0.982	1
PRODH	Amp_Xq11.2	0.982	1
SCYL1	STAM	0.982	1
SCYL1	Amp_Xp22.2	0.982	1
SETD2	3p-Del	0.982	1
SLC14A1	STAM	0.982	1
SLC14A1	Amp_Xp22.2	0.982	1
SLC1A7	STAM	0.982	1
SLC1A7	Amp_Xp22.2	0.982	1
SPATA13	STAM	0.982	1
SPATA13	Amp_Xp22.2	0.982	1
STAG2	SYNE1	0.982	1
STAG2	Del_4q34.3	0.982	1
STAM	VCL	0.982	1
STXBP3	Xp-Del	0.982	1
TP53	9q-Del	0.982	1
TP53	Del_11q23.1	0.982	1
VCL	Amp_Xp22.2	0.982	1
ZNF532	Xp-Del	0.982	1
ZNF598	Del_16q23.3	0.982	1
12p-Amp	Xp-Del	0.982	1
18p-Del	Del_19p13.3	0.982	1
9q-Del	Del_1q43	0.982	1
Xp-Del	Amp_Xq11.2	0.982	1
Amp_Xp22.2	Del_8p23.2	0.982	1
Amp_Xp11.4	Del_9p23	0.982	1
C16orf78	14q-Del	0.983	1
CARKD	ZNF598	0.983	1
CSGALNACT2	12q-Amp	0.983	1
DPYSL4	ZNF598	0.983	1
F2RL1	ZNF598	0.983	1
FAM18B2	ZNF598	0.983	1
IFNB1	ZNF598	0.983	1
IMPA2	14q-Del	0.983	1
INPP5E	14q-Del	0.983	1
KCNK1	ZNF598	0.983	1
KDELR3	10q-Del	0.983	1
KDM6A	STAG2	0.983	1
MYF6	13q-Del	0.983	1
MYF6	21q-Del	0.983	1
NDUFA3	ZNF598	0.983	1
NEK8	ZNF598	0.983	1
ONECUT2	ZNF598	0.983	1
OR10G3	14q-Del	0.983	1
PDLIM4	ZNF598	0.983	1
PRDX5	ZNF598	0.983	1
PRKAG2	Amp_19p13.2	0.983	1
PRODH	21q-Del	0.983	1
RAI1	Del_11q23.1	0.983	1
RALB	ZNF598	0.983	1
RCN1	ZNF598	0.983	1
RIN1	ZNF598	0.983	1
RNF113B	ZNF598	0.983	1
RNF144A	ZNF598	0.983	1
SCYL1	14q-Del	0.983	1
STAM	10q-Del	0.983	1
SYNE1	13q-Del	0.983	1
TMEM47	ZNF598	0.983	1
TP53	9p-Del	0.983	1
VCL	14q-Del	0.983	1
ZNF598	ZNHIT1	0.983	1
16p-Amp	Amp_Xp22.2	0.983	1
13q-Del	Xp-Del	0.983	1
14q-Del	Del_13q14.2	0.983	1
9p-Del	Del_8p23.2	0.983	1
Amp_19p13.2	Amp_Xp22.2	0.983	1
Del_3p12.2	Del_10q23.31	0.983	1
Del_9p21.3	Del_11q21	0.983	1
ADCY8	SMARCA4	0.984	1
C9orf171	Amp_17q25.2	0.984	1
ENO1	12q-Amp	0.984	1
FGFR3	SYNE1	0.984	1
FGFR3	3q-Amp	0.984	1
FGFR3	Amp_17q25.2	0.984	1
GALNT7	5p-Amp	0.984	1
GALNT7	5q-Amp	0.984	1
GPR50	3q-Amp	0.984	1
INPP5E	Amp_17q25.2	0.984	1
KDELR3	3p-Amp	0.984	1
KDELR3	Del_2q37.3	0.984	1
KDM5C	NUDT11	0.984	1
KDM5C	TDG	0.984	1
MYF6	12q-Amp	0.984	1
NTRK3	SYNE1	0.984	1
NTRK3	3q-Amp	0.984	1
NTRK3	Del_4q34.3	0.984	1
PLXDC2	3q-Amp	0.984	1
PLXDC2	Amp_17q25.2	0.984	1
PTCH1	SETD2	0.984	1
PTCH1	5p-Amp	0.984	1
PTCH1	5q-Amp	0.984	1
SETD2	SMARCB1	0.984	1
SLC6A14	SYNE1	0.984	1
SLC6A14	3q-Amp	0.984	1
SLC6A14	Amp_17q25.2	0.984	1
SMARCA4	ZFYVE26	0.984	1
SPATA13	Amp_17q25.2	0.984	1
STAM	Del_2q37.3	0.984	1
SYNE1	Amp_3q26.32	0.984	1
TDG	3q-Amp	0.984	1
12q-Amp	Xp-Del	0.984	1
3q-Amp	21q-Del	0.984	1
6p-Del	Del_19p13.3	0.984	1
Del_3p12.2	Del_11q23.1	0.984	1
Del_13q14.2	Del_14q31.1	0.984	1
ADAM28	CYP4F11	0.985	1
ADAM28	FGFR3	0.985	1
ADAM28	GPR50	0.985	1
ADAM28	NTRK3	0.985	1
ADAM28	NUDT11	0.985	1
ADAM28	PLXDC2	0.985	1
ADAM28	RIMBP3	0.985	1
ADAM28	SLC6A14	0.985	1
ADAM28	TDG	0.985	1
ADAM28	ZNF521	0.985	1
ARAP3	TP53	0.985	1
ARAP3	Del_3p26.3	0.985	1
ARHGAP33	TP53	0.985	1
C16orf78	CYP4F11	0.985	1
C16orf78	FGFR3	0.985	1
C16orf78	GPR50	0.985	1
C16orf78	NTRK3	0.985	1
C16orf78	NUDT11	0.985	1
C16orf78	PLXDC2	0.985	1
C16orf78	RIMBP3	0.985	1
C16orf78	SLC6A14	0.985	1
C16orf78	TDG	0.985	1
C16orf78	ZNF521	0.985	1
C9orf171	CYP4F11	0.985	1
C9orf171	FGFR3	0.985	1
C9orf171	GPR50	0.985	1
C9orf171	NTRK3	0.985	1
C9orf171	NUDT11	0.985	1
C9orf171	PLXDC2	0.985	1
C9orf171	RIMBP3	0.985	1
C9orf171	SLC6A14	0.985	1
C9orf171	TDG	0.985	1
C9orf171	ZNF521	0.985	1
CARKD	KDM6A	0.985	1
CARKD	NF1	0.985	1
CARKD	NFE2L2	0.985	1
CARKD	Del_19p13.3	0.985	1
CDCA8	KDM6A	0.985	1
CDCA8	NF1	0.985	1
CDCA8	NFE2L2	0.985	1
CDCA8	Del_19p13.3	0.985	1
CXorf23	CYP4F11	0.985	1
CXorf23	FGFR3	0.985	1
CXorf23	GPR50	0.985	1
CXorf23	NTRK3	0.985	1
CXorf23	NUDT11	0.985	1
CXorf23	PLXDC2	0.985	1
CXorf23	RIMBP3	0.985	1
CXorf23	SLC6A14	0.985	1
CXorf23	TDG	0.985	1
CXorf23	ZNF521	0.985	1
CYP4F11	IMPA2	0.985	1
CYP4F11	INPP5E	0.985	1
CYP4F11	KIF16B	0.985	1
CYP4F11	OR10G3	0.985	1
CYP4F11	PHF10	0.985	1
CYP4F11	SCYL1	0.985	1
CYP4F11	SLC14A1	0.985	1
CYP4F11	SLC1A7	0.985	1
CYP4F11	SPATA13	0.985	1
CYP4F11	VCL	0.985	1
DPYSL4	KDM6A	0.985	1
DPYSL4	NF1	0.985	1
DPYSL4	NFE2L2	0.985	1
DPYSL4	Del_19p13.3	0.985	1
EMG1	TP53	0.985	1
F2RL1	KDM6A	0.985	1
F2RL1	NF1	0.985	1
F2RL1	NFE2L2	0.985	1
F2RL1	Del_19p13.3	0.985	1
FAM160B2	TP53	0.985	1
FAM18B2	ZNF532	0.985	1
FGFR3	IMPA2	0.985	1
FGFR3	INPP5E	0.985	1
FGFR3	KIF16B	0.985	1
FGFR3	OR10G3	0.985	1
FGFR3	PHF10	0.985	1
FGFR3	SCYL1	0.985	1
FGFR3	SLC14A1	0.985	1
FGFR3	SLC1A7	0.985	1
FGFR3	SPATA13	0.985	1
FGFR3	VCL	0.985	1
FLCN	KDM6A	0.985	1
FLCN	NF1	0.985	1
FLCN	NFE2L2	0.985	1
FLCN	Del_19p13.3	0.985	1
GPR50	IMPA2	0.985	1
GPR50	INPP5E	0.985	1
GPR50	KIF16B	0.985	1
GPR50	OR10G3	0.985	1
GPR50	PHF10	0.985	1
GPR50	SCYL1	0.985	1
GPR50	SLC1A7	0.985	1
GPR50	SPATA13	0.985	1
GPR50	VCL	0.985	1
HNRNPM	ZNF598	0.985	1
IFNB1	KDM6A	0.985	1
IFNB1	NF1	0.985	1
IFNB1	NFE2L2	0.985	1
IFNB1	Del_19p13.3	0.985	1
IMPA2	NTRK3	0.985	1
IMPA2	NUDT11	0.985	1
IMPA2	PLXDC2	0.985	1
IMPA2	RIMBP3	0.985	1
IMPA2	SLC6A14	0.985	1
IMPA2	TDG	0.985	1
IMPA2	ZNF521	0.985	1
INPP5E	NTRK3	0.985	1
INPP5E	NUDT11	0.985	1
INPP5E	PLXDC2	0.985	1
INPP5E	RIMBP3	0.985	1
INPP5E	SLC6A14	0.985	1
INPP5E	TDG	0.985	1
INPP5E	ZNF521	0.985	1
KCNK1	KDM6A	0.985	1
KCNK1	NF1	0.985	1
KCNK1	NFE2L2	0.985	1
KCNK1	Del_19p13.3	0.985	1
KDM5C	3p-Del	0.985	1
KDM6A	NDUFA3	0.985	1
KDM6A	NEK8	0.985	1
KDM6A	NKX2-1	0.985	1
KDM6A	ONECUT2	0.985	1
KDM6A	PDLIM4	0.985	1
KDM6A	PRDX5	0.985	1
KDM6A	RALB	0.985	1
KDM6A	RCN1	0.985	1
KDM6A	RIN1	0.985	1
KDM6A	RNF113B	0.985	1
KDM6A	RNF144A	0.985	1
KDM6A	TMEM47	0.985	1
KDM6A	ZNHIT1	0.985	1
KDM6A	Amp_3q26.32	0.985	1
KIF16B	NTRK3	0.985	1
KIF16B	NUDT11	0.985	1
KIF16B	PLXDC2	0.985	1
KIF16B	RIMBP3	0.985	1
KIF16B	SLC6A14	0.985	1
KIF16B	TDG	0.985	1
KIF16B	ZNF521	0.985	1
NDUFA3	NF1	0.985	1
NDUFA3	NFE2L2	0.985	1
NDUFA3	Del_19p13.3	0.985	1
NEFH	3p-Amp	0.985	1
NEK8	NF1	0.985	1
NEK8	NFE2L2	0.985	1
NEK8	Del_19p13.3	0.985	1
NF1	NKX2-1	0.985	1
NF1	ONECUT2	0.985	1
NF1	PDLIM4	0.985	1
NF1	PRDX5	0.985	1
NF1	RCN1	0.985	1
NF1	RIN1	0.985	1
NF1	RNF113B	0.985	1
NF1	RNF144A	0.985	1
NF1	TMEM47	0.985	1
NF1	ZNHIT1	0.985	1
NF1	Del_16q23.3	0.985	1
NFE2L2	NKX2-1	0.985	1
NFE2L2	ONECUT2	0.985	1
NFE2L2	PDLIM4	0.985	1
NFE2L2	PRDX5	0.985	1
NFE2L2	RALB	0.985	1
NFE2L2	RCN1	0.985	1
NFE2L2	RIN1	0.985	1
NFE2L2	RNF113B	0.985	1
NFE2L2	RNF144A	0.985	1
NFE2L2	TMEM47	0.985	1
NFE2L2	ZNHIT1	0.985	1
NFE2L2	Amp_7q31.2	0.985	1
NFE2L2	Del_16q23.3	0.985	1
NKX2-1	Del_19p13.3	0.985	1
NTRK3	OR10G3	0.985	1
NTRK3	PHF10	0.985	1
NTRK3	SCYL1	0.985	1
NTRK3	SLC14A1	0.985	1
NTRK3	SPATA13	0.985	1
NTRK3	VCL	0.985	1
NUDT11	OR10G3	0.985	1
NUDT11	PHF10	0.985	1
NUDT11	SCYL1	0.985	1
NUDT11	SLC14A1	0.985	1
NUDT11	SLC1A7	0.985	1
NUDT11	SPATA13	0.985	1
NUDT11	VCL	0.985	1
ONECUT2	Del_19p13.3	0.985	1
OR10G3	PLXDC2	0.985	1
OR10G3	RIMBP3	0.985	1
OR10G3	SLC6A14	0.985	1
OR10G3	TDG	0.985	1
OR10G3	ZNF521	0.985	1
PDLIM4	Del_19p13.3	0.985	1
PHF10	PLXDC2	0.985	1
PHF10	RIMBP3	0.985	1
PHF10	SLC6A14	0.985	1
PHF10	TDG	0.985	1
PHF10	ZNF521	0.985	1
PHF10	6q-Del	0.985	1
PIK3CA	ZNF598	0.985	1
PLXDC2	SCYL1	0.985	1
PLXDC2	SLC14A1	0.985	1
PLXDC2	SLC1A7	0.985	1
PLXDC2	SPATA13	0.985	1
PLXDC2	VCL	0.985	1
PRDX5	Del_19p13.3	0.985	1
RALB	Del_19p13.3	0.985	1
RCN1	Del_19p13.3	0.985	1
RIMBP3	SCYL1	0.985	1
RIMBP3	SLC14A1	0.985	1
RIMBP3	SLC1A7	0.985	1
RIMBP3	SPATA13	0.985	1
RIMBP3	VCL	0.985	1
RIN1	Del_19p13.3	0.985	1
RNF113B	Del_19p13.3	0.985	1
RNF144A	Del_19p13.3	0.985	1
SCYL1	SLC6A14	0.985	1
SCYL1	TDG	0.985	1
SCYL1	ZNF521	0.985	1
SLC14A1	SLC6A14	0.985	1
SLC14A1	ZNF521	0.985	1
SLC1A7	SLC6A14	0.985	1
SLC1A7	TDG	0.985	1
SLC1A7	ZNF521	0.985	1
SLC1A7	6q-Del	0.985	1
SLC6A14	SPATA13	0.985	1
SLC6A14	VCL	0.985	1
SPATA13	TDG	0.985	1
SPATA13	ZNF521	0.985	1
SYNE1	Del_16q23.3	0.985	1
TDG	VCL	0.985	1
TMEM47	Del_19p13.3	0.985	1
VCL	ZNF521	0.985	1
ZNHIT1	Del_19p13.3	0.985	1
21q-Del	9p-Del	0.985	1
9p-Del	Del_16q23.3	0.985	1
Amp_2q32.1	Del_9p23	0.985	1
ADCY8	CARKD	0.986	1
ADCY8	CDCA8	0.986	1
ADCY8	DPYSL4	0.986	1
ADCY8	F2RL1	0.986	1
ADCY8	FLCN	0.986	1
ADCY8	IFNB1	0.986	1
ADCY8	KCNK1	0.986	1
ADCY8	NDUFA3	0.986	1
ADCY8	NKX2-1	0.986	1
ADCY8	ONECUT2	0.986	1
ADCY8	PDLIM4	0.986	1
ADCY8	PRDX5	0.986	1
ADCY8	RALB	0.986	1
ADCY8	RCN1	0.986	1
ADCY8	RIN1	0.986	1
ADCY8	RNF113B	0.986	1
ADCY8	RNF144A	0.986	1
ADCY8	TMEM47	0.986	1
ADCY8	ZNHIT1	0.986	1
ARHGAP33	3q-Del	0.986	1
ATM	DPCR1	0.986	1
CARKD	ZFYVE26	0.986	1
CDCA8	ZFYVE26	0.986	1
CDKN2A	ECHDC2	0.986	1
CDKN2A	EDIL3	0.986	1
CDKN2A	ENO1	0.986	1
CDKN2A	FZR1	0.986	1
CDKN2A	HSPA2	0.986	1
CDKN2A	KLK10	0.986	1
CDKN2A	KRAS	0.986	1
CDKN2A	MYF6	0.986	1
CDKN2A	PRODH	0.986	1
CDKN2A	Xp-Del	0.986	1
DPYSL4	ZFYVE26	0.986	1
ECHDC2	EDIL3	0.986	1
ECHDC2	ENO1	0.986	1
ECHDC2	FZR1	0.986	1
ECHDC2	HSPA2	0.986	1
ECHDC2	KLK10	0.986	1
ECHDC2	KRAS	0.986	1
ECHDC2	MYF6	0.986	1
ECHDC2	PRODH	0.986	1
ECHDC2	Xp-Del	0.986	1
EDIL3	ENO1	0.986	1
EDIL3	FZR1	0.986	1
EDIL3	HSPA2	0.986	1
EDIL3	KLK10	0.986	1
EDIL3	KRAS	0.986	1
EDIL3	MYF6	0.986	1
EDIL3	PRODH	0.986	1
EDIL3	Xp-Del	0.986	1
ENO1	FZR1	0.986	1
ENO1	HSPA2	0.986	1
ENO1	KLK10	0.986	1
ENO1	KRAS	0.986	1
ENO1	MYF6	0.986	1
ENO1	PRODH	0.986	1
ENO1	20p-Amp	0.986	1
ENO1	20q-Amp	0.986	1
ENO1	Xp-Del	0.986	1
F2RL1	ZFYVE26	0.986	1
FLCN	ZFYVE26	0.986	1
FZR1	HSPA2	0.986	1
FZR1	KLK10	0.986	1
FZR1	KRAS	0.986	1
FZR1	PRODH	0.986	1
FZR1	Xp-Del	0.986	1
HSPA2	KLK10	0.986	1
HSPA2	KRAS	0.986	1
HSPA2	MYF6	0.986	1
HSPA2	PRODH	0.986	1
HSPA2	Xp-Del	0.986	1
IFNB1	ZFYVE26	0.986	1
KCNK1	ZFYVE26	0.986	1
KDM6A	16p-Amp	0.986	1
KLK10	KRAS	0.986	1
KLK10	MYF6	0.986	1
KLK10	PRODH	0.986	1
KLK10	Xp-Del	0.986	1
KRAS	MYF6	0.986	1
KRAS	PRODH	0.986	1
KRAS	Xp-Del	0.986	1
MYF6	PRODH	0.986	1
MYF6	Xp-Del	0.986	1
NDUFA3	ZFYVE26	0.986	1
NEK8	ZFYVE26	0.986	1
NFE2L2	16p-Amp	0.986	1
NKX2-1	ZFYVE26	0.986	1
ONECUT2	ZFYVE26	0.986	1
PDLIM4	ZFYVE26	0.986	1
PIK3CA	5p-Amp	0.986	1
PIK3CA	5q-Amp	0.986	1
PRDX5	ZFYVE26	0.986	1
PRODH	20p-Amp	0.986	1
PRODH	20q-Amp	0.986	1
PRODH	Xp-Del	0.986	1
RALB	ZFYVE26	0.986	1
RCN1	ZFYVE26	0.986	1
RIN1	ZFYVE26	0.986	1
RNF113B	ZFYVE26	0.986	1
RNF144A	ZFYVE26	0.986	1
SMARCA4	Amp_19p13.2	0.986	1
SMARCB1	12p-Amp	0.986	1
STAM	Del_13q12.13	0.986	1
TMEM47	ZFYVE26	0.986	1
ZFYVE26	ZNHIT1	0.986	1
16p-Amp	Del_19p13.3	0.986	1
16q-Amp	Amp_5q35.1	0.986	1
20p-Amp	Xp-Del	0.986	1
20q-Amp	Xp-Del	0.986	1
18p-Del	Del_3p14.1	0.986	1
9p-Del	Amp_Xp11.4	0.986	1
9q-Del	Amp_Xp11.4	0.986	1
ARAP3	MUC5B	0.987	1
ARHGAP33	MUC5B	0.987	1
ARHGAP33	Del_6q26	0.987	1
EMG1	Del_6q26	0.987	1
FAM160B2	MTOR	0.987	1
FAM18B2	NFE2L2	0.987	1
MUC5B	Amp_Xq11.2	0.987	1
NF1	TP53	0.987	1
NFE2L2	7p-Amp	0.987	1
NFE2L2	7q-Amp	0.987	1
NTRK3	PTEN	0.987	1
PLXDC2	PTEN	0.987	1
PTEN	SLC6A14	0.987	1
PTEN	ZNF521	0.987	1
RAI1	Del_6q26	0.987	1
SYNE1	Del_13q12.13	0.987	1
ZNF814	21q-Del	0.987	1
16q-Amp	21q-Del	0.987	1
10q-Del	Del_9p23	0.987	1
21q-Del	8p-Del	0.987	1
3q-Del	Amp_5q35.1	0.987	1
Amp_5q35.1	Del_3p12.2	0.987	1
Amp_5q35.1	Del_14q31.1	0.987	1
Del_2q37.3	Del_19p13.3	0.987	1
ADAM28	ARAP3	0.988	1
ADAM28	ARHGAP33	0.988	1
ADAM28	CSK	0.988	1
ADAM28	EMG1	0.988	1
ADAM28	FAM160B2	0.988	1
ADAM28	STXBP3	0.988	1
ADAM28	ZNF532	0.988	1
ADAM28	Amp_Xq11.2	0.988	1
ADCY8	ZNF814	0.988	1
ARAP3	C16orf78	0.988	1
ARAP3	C9orf171	0.988	1
ARAP3	CXorf23	0.988	1
ARAP3	IMPA2	0.988	1
ARAP3	INPP5E	0.988	1
ARAP3	KIF16B	0.988	1
ARAP3	OR10G3	0.988	1
ARAP3	PHF10	0.988	1
ARAP3	SCYL1	0.988	1
ARAP3	SLC14A1	0.988	1
ARAP3	SLC1A7	0.988	1
ARAP3	SPATA13	0.988	1
ARAP3	VCL	0.988	1
ARHGAP33	C16orf78	0.988	1
ARHGAP33	C9orf171	0.988	1
ARHGAP33	CXorf23	0.988	1
ARHGAP33	IMPA2	0.988	1
ARHGAP33	INPP5E	0.988	1
ARHGAP33	KIF16B	0.988	1
ARHGAP33	OR10G3	0.988	1
ARHGAP33	PHF10	0.988	1
ARHGAP33	SCYL1	0.988	1
ARHGAP33	SLC14A1	0.988	1
ARHGAP33	SPATA13	0.988	1
ARHGAP33	VCL	0.988	1
C16orf78	CSK	0.988	1
C16orf78	EMG1	0.988	1
C16orf78	FAM160B2	0.988	1
C16orf78	STXBP3	0.988	1
C16orf78	ZNF532	0.988	1
C16orf78	Amp_Xq11.2	0.988	1
C9orf171	CSK	0.988	1
C9orf171	EMG1	0.988	1
C9orf171	FAM160B2	0.988	1
C9orf171	STXBP3	0.988	1
C9orf171	ZNF532	0.988	1
C9orf171	Amp_Xq11.2	0.988	1
CARKD	CSGALNACT2	0.988	1
CARKD	DPCR1	0.988	1
CDCA8	CSGALNACT2	0.988	1
CDCA8	DPCR1	0.988	1
CSGALNACT2	DPYSL4	0.988	1
CSGALNACT2	F2RL1	0.988	1
CSGALNACT2	FLCN	0.988	1
CSGALNACT2	IFNB1	0.988	1
CSGALNACT2	KCNK1	0.988	1
CSGALNACT2	NDUFA3	0.988	1
CSGALNACT2	NEK8	0.988	1
CSGALNACT2	NKX2-1	0.988	1
CSGALNACT2	ONECUT2	0.988	1
CSGALNACT2	PDLIM4	0.988	1
CSGALNACT2	PRDX5	0.988	1
CSGALNACT2	RALB	0.988	1
CSGALNACT2	RCN1	0.988	1
CSGALNACT2	RIN1	0.988	1
CSGALNACT2	RNF113B	0.988	1
CSGALNACT2	RNF144A	0.988	1
CSGALNACT2	TMEM47	0.988	1
CSGALNACT2	ZNHIT1	0.988	1
CSK	CXorf23	0.988	1
CSK	IMPA2	0.988	1
CSK	INPP5E	0.988	1
CSK	KIF16B	0.988	1
CSK	OR10G3	0.988	1
CSK	PHF10	0.988	1
CSK	SCYL1	0.988	1
CSK	SLC14A1	0.988	1
CSK	SLC1A7	0.988	1
CSK	SPATA13	0.988	1
CSK	VCL	0.988	1
CXorf23	EMG1	0.988	1
CXorf23	FAM160B2	0.988	1
CXorf23	STXBP3	0.988	1
CXorf23	ZNF532	0.988	1
CXorf23	Amp_Xq11.2	0.988	1
DPCR1	DPYSL4	0.988	1
DPCR1	F2RL1	0.988	1
DPCR1	FLCN	0.988	1
DPCR1	IFNB1	0.988	1
DPCR1	KCNK1	0.988	1
DPCR1	NDUFA3	0.988	1
DPCR1	NEK8	0.988	1
DPCR1	NKX2-1	0.988	1
DPCR1	ONECUT2	0.988	1
DPCR1	PDLIM4	0.988	1
DPCR1	PRDX5	0.988	1
DPCR1	RALB	0.988	1
DPCR1	RCN1	0.988	1
DPCR1	RIN1	0.988	1
DPCR1	RNF113B	0.988	1
DPCR1	RNF144A	0.988	1
DPCR1	TMEM47	0.988	1
DPCR1	ZNHIT1	0.988	1
EMG1	IMPA2	0.988	1
EMG1	INPP5E	0.988	1
EMG1	KIF16B	0.988	1
EMG1	OR10G3	0.988	1
EMG1	PHF10	0.988	1
EMG1	SCYL1	0.988	1
EMG1	SLC14A1	0.988	1
EMG1	SLC1A7	0.988	1
EMG1	SPATA13	0.988	1
EMG1	VCL	0.988	1
FAM160B2	IMPA2	0.988	1
FAM160B2	INPP5E	0.988	1
FAM160B2	KIF16B	0.988	1
FAM160B2	OR10G3	0.988	1
FAM160B2	PHF10	0.988	1
FAM160B2	SCYL1	0.988	1
FAM160B2	SLC14A1	0.988	1
FAM160B2	SLC1A7	0.988	1
FAM160B2	SPATA13	0.988	1
FAM160B2	VCL	0.988	1
GPR50	Amp_2q32.1	0.988	1
GPR50	Amp_19p13.2	0.988	1
IMPA2	STXBP3	0.988	1
IMPA2	ZNF532	0.988	1
IMPA2	Amp_Xq11.2	0.988	1
INPP5E	STXBP3	0.988	1
INPP5E	ZNF532	0.988	1
INPP5E	Amp_Xq11.2	0.988	1
KDELR3	Del_11q23.1	0.988	1
KIF16B	STXBP3	0.988	1
KIF16B	ZNF532	0.988	1
KIF16B	Amp_Xq11.2	0.988	1
OR10G3	STXBP3	0.988	1
OR10G3	ZNF532	0.988	1
OR10G3	Amp_Xq11.2	0.988	1
PHF10	STXBP3	0.988	1
PHF10	ZNF532	0.988	1
PHF10	6p-Del	0.988	1
PHF10	Amp_Xq11.2	0.988	1
PHF10	Del_10q23.31	0.988	1
PRKAG2	Del_11q23.1	0.988	1
SCYL1	STXBP3	0.988	1
SCYL1	ZNF532	0.988	1
SCYL1	Amp_Xq11.2	0.988	1
SLC14A1	STXBP3	0.988	1
SLC14A1	ZNF532	0.988	1
SLC14A1	Amp_Xq11.2	0.988	1
SLC1A7	STXBP3	0.988	1
SLC1A7	ZNF532	0.988	1
SLC1A7	6p-Del	0.988	1
SLC1A7	Amp_Xq11.2	0.988	1
SLC1A7	Del_10q23.31	0.988	1
SLC6A14	Amp_19p13.2	0.988	1
SPATA13	STXBP3	0.988	1
SPATA13	ZNF532	0.988	1
SPATA13	Amp_Xq11.2	0.988	1
SPATA13	Del_10q23.31	0.988	1
STAM	Del_11q23.1	0.988	1
STAM	Del_13q14.2	0.988	1
STXBP3	VCL	0.988	1
SYNE1	Del_9p21.3	0.988	1
VCL	ZNF532	0.988	1
VCL	Amp_Xq11.2	0.988	1
VCL	Del_10q23.31	0.988	1
16p-Amp	Del_11q23.1	0.988	1
18p-Del	9q-Del	0.988	1
Del_9p21.3	Del_13q12.13	0.988	1
ARHGAP33	Del_6q22.31	0.989	1
ATM	RAI1	0.989	1
ATM	SMARCB1	0.989	1
C16orf78	Del_8p23.2	0.989	1
C9orf171	16p-Amp	0.989	1
C9orf171	17q-Amp	0.989	1
CARKD	GALNT7	0.989	1
CARKD	PTCH1	0.989	1
CARKD	RAI1	0.989	1
CARKD	SMARCB1	0.989	1
CARKD	Amp_Xp11.4	0.989	1
CDCA8	GALNT7	0.989	1
CDCA8	PTCH1	0.989	1
CDCA8	RAI1	0.989	1
CDCA8	SMARCB1	0.989	1
CDCA8	Amp_Xp11.4	0.989	1
CSGALNACT2	STAG2	0.989	1
CSGALNACT2	18q-Del	0.989	1
DPYSL4	GALNT7	0.989	1
DPYSL4	PTCH1	0.989	1
DPYSL4	RAI1	0.989	1
DPYSL4	SMARCB1	0.989	1
DPYSL4	Amp_Xp11.4	0.989	1
EMG1	Del_6q22.31	0.989	1
ENO1	18q-Del	0.989	1
F2RL1	GALNT7	0.989	1
F2RL1	PTCH1	0.989	1
F2RL1	RAI1	0.989	1
F2RL1	SMARCB1	0.989	1
F2RL1	Amp_Xp11.4	0.989	1
FGFR3	3p-Amp	0.989	1
FLCN	GALNT7	0.989	1
FLCN	PTCH1	0.989	1
FLCN	RAI1	0.989	1
FLCN	SMARCB1	0.989	1
FLCN	Amp_Xp11.4	0.989	1
GALNT7	IFNB1	0.989	1
GALNT7	KCNK1	0.989	1
GALNT7	NDUFA3	0.989	1
GALNT7	NEK8	0.989	1
GALNT7	NKX2-1	0.989	1
GALNT7	ONECUT2	0.989	1
GALNT7	PDLIM4	0.989	1
GALNT7	PRDX5	0.989	1
GALNT7	RALB	0.989	1
GALNT7	RCN1	0.989	1
GALNT7	RIN1	0.989	1
GALNT7	RNF113B	0.989	1
GALNT7	RNF144A	0.989	1
GALNT7	TMEM47	0.989	1
GALNT7	ZNHIT1	0.989	1
GPR50	3p-Amp	0.989	1
HSPA2	18q-Del	0.989	1
IFNB1	PTCH1	0.989	1
IFNB1	RAI1	0.989	1
IFNB1	SMARCB1	0.989	1
IFNB1	Amp_Xp11.4	0.989	1
IMPA2	Del_8p23.2	0.989	1
INPP5E	17q-Amp	0.989	1
INPP5E	Del_8p23.2	0.989	1
KCNK1	PTCH1	0.989	1
KCNK1	RAI1	0.989	1
KCNK1	SMARCB1	0.989	1
KCNK1	Amp_Xp11.4	0.989	1
KIF16B	Del_8p23.2	0.989	1
MTOR	9q-Del	0.989	1
MUC5B	6q-Del	0.989	1
NDUFA3	PTCH1	0.989	1
NDUFA3	RAI1	0.989	1
NDUFA3	SMARCB1	0.989	1
NDUFA3	Amp_Xp11.4	0.989	1
NEFH	16q-Amp	0.989	1
NEK8	PTCH1	0.989	1
NEK8	RAI1	0.989	1
NEK8	SMARCB1	0.989	1
NEK8	Amp_Xp11.4	0.989	1
NF2	PTCH1	0.989	1
NF2	SMARCB1	0.989	1
NF2	16q-Amp	0.989	1
NKX2-1	PTCH1	0.989	1
NKX2-1	RAI1	0.989	1
NKX2-1	SMARCB1	0.989	1
NKX2-1	Amp_Xp11.4	0.989	1
NTRK3	3p-Amp	0.989	1
ONECUT2	PTCH1	0.989	1
ONECUT2	RAI1	0.989	1
ONECUT2	SMARCB1	0.989	1
ONECUT2	Amp_Xp11.4	0.989	1
PDLIM4	PTCH1	0.989	1
PDLIM4	RAI1	0.989	1
PDLIM4	SMARCB1	0.989	1
PDLIM4	Amp_Xp11.4	0.989	1
PHF10	10q-Del	0.989	1
PHF10	1p-Del	0.989	1
PLXDC2	3p-Amp	0.989	1
PRDX5	PTCH1	0.989	1
PRDX5	RAI1	0.989	1
PRDX5	SMARCB1	0.989	1
PRDX5	Amp_Xp11.4	0.989	1
PTCH1	RALB	0.989	1
PTCH1	RCN1	0.989	1
PTCH1	RIN1	0.989	1
PTCH1	RNF113B	0.989	1
PTCH1	RNF144A	0.989	1
PTCH1	TMEM47	0.989	1
PTCH1	ZNHIT1	0.989	1
RAI1	RALB	0.989	1
RAI1	RCN1	0.989	1
RAI1	RIN1	0.989	1
RAI1	RNF113B	0.989	1
RAI1	RNF144A	0.989	1
RAI1	TMEM47	0.989	1
RAI1	ZNHIT1	0.989	1
RAI1	Del_6q22.31	0.989	1
RALB	SMARCB1	0.989	1
RALB	Amp_Xp11.4	0.989	1
RCN1	SMARCB1	0.989	1
RCN1	Amp_Xp11.4	0.989	1
RIN1	SMARCB1	0.989	1
RIN1	Amp_Xp11.4	0.989	1
RNF113B	SMARCB1	0.989	1
RNF113B	Amp_Xp11.4	0.989	1
RNF144A	SMARCB1	0.989	1
RNF144A	Amp_Xp11.4	0.989	1
SLC1A7	10q-Del	0.989	1
SLC6A14	3p-Amp	0.989	1
SLC6A14	6p-Del	0.989	1
SMARCB1	TMEM47	0.989	1
SMARCB1	ZNHIT1	0.989	1
SPATA13	17q-Amp	0.989	1
SYNE1	17p-Del	0.989	1
TDG	3p-Amp	0.989	1
TMEM47	Amp_Xp11.4	0.989	1
VCL	16p-Amp	0.989	1
VCL	10q-Del	0.989	1
ZNHIT1	Amp_Xp11.4	0.989	1
5p-Amp	Del_3p21.2	0.989	1
18q-Del	Del_3p14.1	0.989	1
Amp_Xp22.2	Del_9p23	0.989	1
Amp_Xq11.2	Del_1p36.31	0.989	1
Del_6q26	Del_19p13.3	0.989	1
ADCY8	HNRNPM	0.99	1
ARHGAP33	3q-Amp	0.99	1
ARHGAP33	Del_4q34.3	0.99	1
CSGALNACT2	6q-Del	0.99	1
CYP4F11	Del_8p23.2	0.99	1
ECHDC2	Del_3p12.2	0.99	1
ENO1	18p-Del	0.99	1
FAM160B2	KDM5C	0.99	1
GPR50	2q-Amp	0.99	1
GPR50	Del_8p23.2	0.99	1
HSPA2	18p-Del	0.99	1
KDM5C	Amp_5q35.1	0.99	1
KLK10	Del_3p12.2	0.99	1
MTOR	NF1	0.99	1
MTOR	9p-Del	0.99	1
MUC5B	NF1	0.99	1
PHF10	Del_2q37.3	0.99	1
PLXDC2	17q-Amp	0.99	1
SLC1A7	Del_2q37.3	0.99	1
SLC6A14	17q-Amp	0.99	1
SLC6A14	Del_8p23.2	0.99	1
SMARCB1	Del_14q31.1	0.99	1
ZNF814	20p-Amp	0.99	1
ZNF814	20q-Amp	0.99	1
ZNF814	Amp_19p13.2	0.99	1
5p-Amp	7p-Amp	0.99	1
14q-Del	18p-Del	0.99	1
18q-Del	Del_14q31.1	0.99	1
Del_8p23.2	Del_9p21.3	0.99	1
Del_9p21.3	Del_19p13.3	0.99	1
ADAM28	CDKN2A	0.991	1
ADAM28	ECHDC2	0.991	1
ADAM28	EDIL3	0.991	1
ADAM28	ENO1	0.991	1
ADAM28	FZR1	0.991	1
ADAM28	HSPA2	0.991	1
ADAM28	KLK10	0.991	1
ADAM28	KRAS	0.991	1
ADAM28	MYF6	0.991	1
ADAM28	PRODH	0.991	1
ADAM28	Xp-Del	0.991	1
C16orf78	CDKN2A	0.991	1
C16orf78	ECHDC2	0.991	1
C16orf78	EDIL3	0.991	1
C16orf78	ENO1	0.991	1
C16orf78	FZR1	0.991	1
C16orf78	HSPA2	0.991	1
C16orf78	KLK10	0.991	1
C16orf78	KRAS	0.991	1
C16orf78	MYF6	0.991	1
C16orf78	PRODH	0.991	1
C16orf78	Xp-Del	0.991	1
C16orf78	Del_9p21.3	0.991	1
C9orf171	CDKN2A	0.991	1
C9orf171	ECHDC2	0.991	1
C9orf171	EDIL3	0.991	1
C9orf171	ENO1	0.991	1
C9orf171	FZR1	0.991	1
C9orf171	HSPA2	0.991	1
C9orf171	KLK10	0.991	1
C9orf171	KRAS	0.991	1
C9orf171	MYF6	0.991	1
C9orf171	PRODH	0.991	1
C9orf171	17p-Amp	0.991	1
C9orf171	Xp-Del	0.991	1
CARKD	EGFR	0.991	1
CARKD	KDELR3	0.991	1
CARKD	PRKAG2	0.991	1
CARKD	STAM	0.991	1
CARKD	Amp_Xp22.2	0.991	1
CDCA8	EGFR	0.991	1
CDCA8	KDELR3	0.991	1
CDCA8	PRKAG2	0.991	1
CDCA8	STAM	0.991	1
CDCA8	Amp_Xp22.2	0.991	1
CDKN2A	CXorf23	0.991	1
CDKN2A	IMPA2	0.991	1
CDKN2A	INPP5E	0.991	1
CDKN2A	KIF16B	0.991	1
CDKN2A	OR10G3	0.991	1
CDKN2A	PHF10	0.991	1
CDKN2A	SCYL1	0.991	1
CDKN2A	SLC14A1	0.991	1
CDKN2A	SLC1A7	0.991	1
CDKN2A	SPATA13	0.991	1
CDKN2A	VCL	0.991	1
CDKN2A	Amp_3q26.32	0.991	1
CSGALNACT2	Del_16q23.3	0.991	1
CXorf23	ECHDC2	0.991	1
CXorf23	EDIL3	0.991	1
CXorf23	FZR1	0.991	1
CXorf23	HSPA2	0.991	1
CXorf23	KLK10	0.991	1
CXorf23	KRAS	0.991	1
CXorf23	MYF6	0.991	1
CXorf23	PRODH	0.991	1
CXorf23	Xp-Del	0.991	1
DPYSL4	EGFR	0.991	1
DPYSL4	KDELR3	0.991	1
DPYSL4	PRKAG2	0.991	1
DPYSL4	STAM	0.991	1
DPYSL4	Amp_Xp22.2	0.991	1
ECHDC2	IMPA2	0.991	1
ECHDC2	INPP5E	0.991	1
ECHDC2	KIF16B	0.991	1
ECHDC2	OR10G3	0.991	1
ECHDC2	PBRM1	0.991	1
ECHDC2	PHF10	0.991	1
ECHDC2	SCYL1	0.991	1
ECHDC2	SLC14A1	0.991	1
ECHDC2	SLC1A7	0.991	1
ECHDC2	SPATA13	0.991	1
ECHDC2	VCL	0.991	1
EDIL3	IMPA2	0.991	1
EDIL3	INPP5E	0.991	1
EDIL3	KIF16B	0.991	1
EDIL3	OR10G3	0.991	1
EDIL3	PBRM1	0.991	1
EDIL3	PHF10	0.991	1
EDIL3	SCYL1	0.991	1
EDIL3	SLC14A1	0.991	1
EDIL3	SLC1A7	0.991	1
EDIL3	SPATA13	0.991	1
EDIL3	VCL	0.991	1
EDIL3	Amp_3q26.32	0.991	1
EGFR	F2RL1	0.991	1
EGFR	FLCN	0.991	1
EGFR	IFNB1	0.991	1
EGFR	KCNK1	0.991	1
EGFR	NDUFA3	0.991	1
EGFR	NEK8	0.991	1
EGFR	NKX2-1	0.991	1
EGFR	ONECUT2	0.991	1
EGFR	PDLIM4	0.991	1
EGFR	PRDX5	0.991	1
EGFR	RALB	0.991	1
EGFR	RCN1	0.991	1
EGFR	RIN1	0.991	1
EGFR	RNF113B	0.991	1
EGFR	RNF144A	0.991	1
EGFR	TMEM47	0.991	1
EGFR	ZNHIT1	0.991	1
ENO1	IMPA2	0.991	1
ENO1	INPP5E	0.991	1
ENO1	KIF16B	0.991	1
ENO1	OR10G3	0.991	1
ENO1	PHF10	0.991	1
ENO1	SCYL1	0.991	1
ENO1	SLC14A1	0.991	1
ENO1	SLC1A7	0.991	1
ENO1	VCL	0.991	1
F2RL1	KDELR3	0.991	1
F2RL1	PRKAG2	0.991	1
F2RL1	STAM	0.991	1
F2RL1	Amp_Xp22.2	0.991	1
FLCN	KDELR3	0.991	1
FLCN	PRKAG2	0.991	1
FLCN	STAM	0.991	1
FLCN	Amp_Xp22.2	0.991	1
FZR1	IMPA2	0.991	1
FZR1	INPP5E	0.991	1
FZR1	KIF16B	0.991	1
FZR1	OR10G3	0.991	1
FZR1	PBRM1	0.991	1
FZR1	PHF10	0.991	1
FZR1	SCYL1	0.991	1
FZR1	SLC14A1	0.991	1
FZR1	SLC1A7	0.991	1
FZR1	SPATA13	0.991	1
FZR1	VCL	0.991	1
GALNT7	Amp_5q35.1	0.991	1
GPR50	16p-Amp	0.991	1
HSPA2	IMPA2	0.991	1
HSPA2	INPP5E	0.991	1
HSPA2	KIF16B	0.991	1
HSPA2	OR10G3	0.991	1
HSPA2	PHF10	0.991	1
HSPA2	SCYL1	0.991	1
HSPA2	SLC14A1	0.991	1
HSPA2	SLC1A7	0.991	1
HSPA2	SPATA13	0.991	1
HSPA2	VCL	0.991	1
IFNB1	KDELR3	0.991	1
IFNB1	PRKAG2	0.991	1
IFNB1	STAM	0.991	1
IFNB1	Amp_Xp22.2	0.991	1
IMPA2	KLK10	0.991	1
IMPA2	KRAS	0.991	1
IMPA2	MYF6	0.991	1
IMPA2	PRODH	0.991	1
IMPA2	17p-Del	0.991	1
IMPA2	Xp-Del	0.991	1
IMPA2	Del_13q12.13	0.991	1
INPP5E	KLK10	0.991	1
INPP5E	KRAS	0.991	1
INPP5E	MYF6	0.991	1
INPP5E	PRODH	0.991	1
INPP5E	17p-Amp	0.991	1
INPP5E	Xp-Del	0.991	1
KCNK1	KDELR3	0.991	1
KCNK1	STAM	0.991	1
KCNK1	Amp_Xp22.2	0.991	1
KDELR3	NDUFA3	0.991	1
KDELR3	NEK8	0.991	1
KDELR3	NKX2-1	0.991	1
KDELR3	ONECUT2	0.991	1
KDELR3	PDLIM4	0.991	1
KDELR3	PRDX5	0.991	1
KDELR3	RALB	0.991	1
KDELR3	RCN1	0.991	1
KDELR3	RIN1	0.991	1
KDELR3	RNF113B	0.991	1
KDELR3	RNF144A	0.991	1
KDELR3	TMEM47	0.991	1
KDELR3	ZNHIT1	0.991	1
KDM6A	NFE2L2	0.991	1
KDM6A	16q-Amp	0.991	1
KIF16B	KLK10	0.991	1
KIF16B	KRAS	0.991	1
KIF16B	MYF6	0.991	1
KIF16B	PRODH	0.991	1
KIF16B	Xp-Del	0.991	1
KLK10	OR10G3	0.991	1
KLK10	PBRM1	0.991	1
KLK10	PHF10	0.991	1
KLK10	SCYL1	0.991	1
KLK10	SLC14A1	0.991	1
KLK10	SLC1A7	0.991	1
KLK10	SPATA13	0.991	1
KLK10	VCL	0.991	1
KRAS	OR10G3	0.991	1
KRAS	PHF10	0.991	1
KRAS	SCYL1	0.991	1
KRAS	SLC14A1	0.991	1
KRAS	SLC1A7	0.991	1
KRAS	SPATA13	0.991	1
KRAS	VCL	0.991	1
MTOR	SYNE1	0.991	1
MUC5B	3q-Amp	0.991	1
MYF6	OR10G3	0.991	1
MYF6	PBRM1	0.991	1
MYF6	PHF10	0.991	1
MYF6	SCYL1	0.991	1
MYF6	SLC14A1	0.991	1
MYF6	SLC1A7	0.991	1
MYF6	SPATA13	0.991	1
MYF6	VCL	0.991	1
NDUFA3	PRKAG2	0.991	1
NDUFA3	STAM	0.991	1
NDUFA3	Amp_Xp22.2	0.991	1
NEFH	Amp_17q25.2	0.991	1
NEK8	PRKAG2	0.991	1
NEK8	STAM	0.991	1
NEK8	Amp_Xp22.2	0.991	1
NF1	NFE2L2	0.991	1
NF1	Del_19p13.3	0.991	1
NFE2L2	16q-Amp	0.991	1
NKX2-1	PRKAG2	0.991	1
NKX2-1	STAM	0.991	1
NKX2-1	Amp_Xp22.2	0.991	1
ONECUT2	PRKAG2	0.991	1
ONECUT2	STAM	0.991	1
ONECUT2	Amp_Xp22.2	0.991	1
OR10G3	PRODH	0.991	1
OR10G3	Xp-Del	0.991	1
PDLIM4	PRKAG2	0.991	1
PDLIM4	STAM	0.991	1
PDLIM4	Amp_Xp22.2	0.991	1
PHF10	PRODH	0.991	1
PHF10	17p-Del	0.991	1
PHF10	Xp-Del	0.991	1
PHF10	Del_13q12.13	0.991	1
PRDX5	PRKAG2	0.991	1
PRDX5	STAM	0.991	1
PRDX5	Amp_Xp22.2	0.991	1
PRKAG2	RALB	0.991	1
PRKAG2	RCN1	0.991	1
PRKAG2	RIN1	0.991	1
PRKAG2	RNF113B	0.991	1
PRKAG2	RNF144A	0.991	1
PRKAG2	TMEM47	0.991	1
PRKAG2	ZNHIT1	0.991	1
PRKAG2	9q-Del	0.991	1
PRODH	SCYL1	0.991	1
PRODH	SLC14A1	0.991	1
PRODH	SPATA13	0.991	1
PRODH	VCL	0.991	1
PTEN	21q-Del	0.991	1
RALB	STAM	0.991	1
RALB	Amp_Xp22.2	0.991	1
RCN1	STAM	0.991	1
RCN1	Amp_Xp22.2	0.991	1
RIMBP3	Del_2q37.3	0.991	1
RIN1	STAM	0.991	1
RIN1	Amp_Xp22.2	0.991	1
RNF113B	STAM	0.991	1
RNF113B	Amp_Xp22.2	0.991	1
RNF144A	STAM	0.991	1
RNF144A	Amp_Xp22.2	0.991	1
SCYL1	Xp-Del	0.991	1
SCYL1	Del_9p21.3	0.991	1
SLC14A1	Xp-Del	0.991	1
SLC1A7	Xp-Del	0.991	1
SLC6A14	16p-Amp	0.991	1
SPATA13	17p-Amp	0.991	1
SPATA13	Xp-Del	0.991	1
STAM	TMEM47	0.991	1
STAM	ZNHIT1	0.991	1
SYNE1	Del_13q14.2	0.991	1
TDG	16p-Amp	0.991	1
TMEM47	Amp_Xp22.2	0.991	1
TP53	20p-Amp	0.991	1
TP53	20q-Amp	0.991	1
VCL	Xp-Del	0.991	1
VCL	Del_9p21.3	0.991	1
ZNHIT1	Amp_Xp22.2	0.991	1
12p-Amp	5p-Amp	0.991	1
12p-Amp	5q-Amp	0.991	1
5p-Amp	8p-Del	0.991	1
5q-Amp	8p-Del	0.991	1
17p-Del	Del_9p21.3	0.991	1
18p-Del	Del_10q23.31	0.991	1
9p-Del	Del_13q12.13	0.991	1
9q-Del	Amp_Xp22.2	0.991	1
Amp_2q32.1	Amp_19p13.2	0.991	1
Amp_5q35.1	Amp_7q31.2	0.991	1
Amp_5q35.1	Amp_Xq11.2	0.991	1
Del_1p31.1	Del_14q31.1	0.991	1
Del_3p26.3	Del_6q22.31	0.991	1
Del_3p12.2	Del_19p13.3	0.991	1
Del_9p23	Del_10q23.31	0.991	1
Del_11q23.1	Del_13q12.13	0.991	1
ARHGAP33	PTEN	0.992	1
ATM	KDELR3	0.992	1
ATM	5p-Amp	0.992	1
ATM	5q-Amp	0.992	1
C16orf78	Del_9p23	0.992	1
C9orf171	16q-Amp	0.992	1
CARKD	CYP4F11	0.992	1
CARKD	FGFR3	0.992	1
CARKD	GPR50	0.992	1
CARKD	NTRK3	0.992	1
CARKD	NUDT11	0.992	1
CARKD	PLXDC2	0.992	1
CARKD	RIMBP3	0.992	1
CARKD	SLC6A14	0.992	1
CARKD	TDG	0.992	1
CARKD	ZNF521	0.992	1
CDCA8	CYP4F11	0.992	1
CDCA8	FGFR3	0.992	1
CDCA8	GPR50	0.992	1
CDCA8	NTRK3	0.992	1
CDCA8	NUDT11	0.992	1
CDCA8	PLXDC2	0.992	1
CDCA8	RIMBP3	0.992	1
CDCA8	SLC6A14	0.992	1
CDCA8	TDG	0.992	1
CDCA8	ZNF521	0.992	1
CDKN2A	FAM18B2	0.992	1
CYP4F11	DPYSL4	0.992	1
CYP4F11	F2RL1	0.992	1
CYP4F11	FLCN	0.992	1
CYP4F11	KCNK1	0.992	1
CYP4F11	NDUFA3	0.992	1
CYP4F11	NEK8	0.992	1
CYP4F11	NKX2-1	0.992	1
CYP4F11	ONECUT2	0.992	1
CYP4F11	PDLIM4	0.992	1
CYP4F11	PRDX5	0.992	1
CYP4F11	RALB	0.992	1
CYP4F11	RCN1	0.992	1
CYP4F11	RIN1	0.992	1
CYP4F11	RNF113B	0.992	1
CYP4F11	RNF144A	0.992	1
CYP4F11	TMEM47	0.992	1
CYP4F11	ZNHIT1	0.992	1
DPYSL4	FGFR3	0.992	1
DPYSL4	GPR50	0.992	1
DPYSL4	NTRK3	0.992	1
DPYSL4	NUDT11	0.992	1
DPYSL4	PLXDC2	0.992	1
DPYSL4	RIMBP3	0.992	1
DPYSL4	SLC6A14	0.992	1
DPYSL4	TDG	0.992	1
DPYSL4	ZNF521	0.992	1
EMG1	PTEN	0.992	1
ENO1	TP53	0.992	1
F2RL1	FGFR3	0.992	1
F2RL1	GPR50	0.992	1
F2RL1	NTRK3	0.992	1
F2RL1	NUDT11	0.992	1
F2RL1	PLXDC2	0.992	1
F2RL1	RIMBP3	0.992	1
F2RL1	SLC6A14	0.992	1
F2RL1	TDG	0.992	1
F2RL1	ZNF521	0.992	1
FAM18B2	KRAS	0.992	1
FAM18B2	NF2	0.992	1
FGFR3	FLCN	0.992	1
FGFR3	IFNB1	0.992	1
FGFR3	KCNK1	0.992	1
FGFR3	NDUFA3	0.992	1
FGFR3	NEK8	0.992	1
FGFR3	NKX2-1	0.992	1
FGFR3	ONECUT2	0.992	1
FGFR3	PDLIM4	0.992	1
FGFR3	PRDX5	0.992	1
FGFR3	RALB	0.992	1
FGFR3	RCN1	0.992	1
FGFR3	RIN1	0.992	1
FGFR3	RNF113B	0.992	1
FGFR3	RNF144A	0.992	1
FGFR3	TMEM47	0.992	1
FGFR3	ZNHIT1	0.992	1
FGFR3	Del_11q23.1	0.992	1
FLCN	GPR50	0.992	1
FLCN	NTRK3	0.992	1
FLCN	NUDT11	0.992	1
FLCN	PLXDC2	0.992	1
FLCN	RIMBP3	0.992	1
FLCN	SLC6A14	0.992	1
FLCN	TDG	0.992	1
FLCN	ZNF521	0.992	1
GPR50	IFNB1	0.992	1
GPR50	KCNK1	0.992	1
GPR50	NDUFA3	0.992	1
GPR50	NEK8	0.992	1
GPR50	NKX2-1	0.992	1
GPR50	ONECUT2	0.992	1
GPR50	PDLIM4	0.992	1
GPR50	PRDX5	0.992	1
GPR50	RALB	0.992	1
GPR50	RCN1	0.992	1
GPR50	RIN1	0.992	1
GPR50	RNF113B	0.992	1
GPR50	RNF144A	0.992	1
GPR50	TMEM47	0.992	1
GPR50	ZNHIT1	0.992	1
GPR50	Del_11q23.1	0.992	1
IFNB1	NTRK3	0.992	1
IFNB1	NUDT11	0.992	1
IFNB1	PLXDC2	0.992	1
IFNB1	RIMBP3	0.992	1
IFNB1	SLC6A14	0.992	1
IFNB1	TDG	0.992	1
IFNB1	ZNF521	0.992	1
IMPA2	8p-Del	0.992	1
IMPA2	Del_9p23	0.992	1
IMPA2	Del_13q14.2	0.992	1
INPP5E	8p-Del	0.992	1
KCNK1	NTRK3	0.992	1
KCNK1	NUDT11	0.992	1
KCNK1	PLXDC2	0.992	1
KCNK1	RIMBP3	0.992	1
KCNK1	SLC6A14	0.992	1
KCNK1	TDG	0.992	1
KCNK1	ZNF521	0.992	1
KIF16B	8p-Del	0.992	1
MET	NF2	0.992	1
MUC5B	Del_13q12.13	0.992	1
NDUFA3	NTRK3	0.992	1
NDUFA3	NUDT11	0.992	1
NDUFA3	PLXDC2	0.992	1
NDUFA3	RIMBP3	0.992	1
NDUFA3	SLC6A14	0.992	1
NDUFA3	TDG	0.992	1
NDUFA3	ZNF521	0.992	1
NEK8	NTRK3	0.992	1
NEK8	NUDT11	0.992	1
NEK8	PLXDC2	0.992	1
NEK8	RIMBP3	0.992	1
NEK8	SLC6A14	0.992	1
NEK8	TDG	0.992	1
NEK8	ZNF521	0.992	1
NF2	SETD2	0.992	1
NF2	STAM	0.992	1
NKX2-1	NTRK3	0.992	1
NKX2-1	NUDT11	0.992	1
NKX2-1	PLXDC2	0.992	1
NKX2-1	RIMBP3	0.992	1
NKX2-1	SLC6A14	0.992	1
NKX2-1	TDG	0.992	1
NKX2-1	ZNF521	0.992	1
NTRK3	ONECUT2	0.992	1
NTRK3	PBRM1	0.992	1
NTRK3	PDLIM4	0.992	1
NTRK3	PRDX5	0.992	1
NTRK3	RALB	0.992	1
NTRK3	RCN1	0.992	1
NTRK3	RIN1	0.992	1
NTRK3	RNF113B	0.992	1
NTRK3	RNF144A	0.992	1
NTRK3	TMEM47	0.992	1
NTRK3	ZNHIT1	0.992	1
NUDT11	ONECUT2	0.992	1
NUDT11	PDLIM4	0.992	1
NUDT11	PRDX5	0.992	1
NUDT11	RALB	0.992	1
NUDT11	RCN1	0.992	1
NUDT11	RIN1	0.992	1
NUDT11	RNF113B	0.992	1
NUDT11	RNF144A	0.992	1
NUDT11	TMEM47	0.992	1
NUDT11	ZNHIT1	0.992	1
ONECUT2	PLXDC2	0.992	1
ONECUT2	RIMBP3	0.992	1
ONECUT2	SLC6A14	0.992	1
ONECUT2	TDG	0.992	1
ONECUT2	ZNF521	0.992	1
PDLIM4	PLXDC2	0.992	1
PDLIM4	RIMBP3	0.992	1
PDLIM4	SLC6A14	0.992	1
PDLIM4	TDG	0.992	1
PDLIM4	ZNF521	0.992	1
PHF10	Del_1q43	0.992	1
PHF10	Del_13q14.2	0.992	1
PLXDC2	PRDX5	0.992	1
PLXDC2	RALB	0.992	1
PLXDC2	RCN1	0.992	1
PLXDC2	RIN1	0.992	1
PLXDC2	RNF113B	0.992	1
PLXDC2	RNF144A	0.992	1
PLXDC2	TMEM47	0.992	1
PLXDC2	ZNHIT1	0.992	1
PRDX5	RIMBP3	0.992	1
PRDX5	SLC6A14	0.992	1
PRDX5	TDG	0.992	1
PRDX5	ZNF521	0.992	1
PRODH	TP53	0.992	1
RALB	RIMBP3	0.992	1
RALB	SLC6A14	0.992	1
RALB	TDG	0.992	1
RALB	ZNF521	0.992	1
RCN1	RIMBP3	0.992	1
RCN1	SLC6A14	0.992	1
RCN1	TDG	0.992	1
RCN1	ZNF521	0.992	1
RIMBP3	RIN1	0.992	1
RIMBP3	RNF113B	0.992	1
RIMBP3	RNF144A	0.992	1
RIMBP3	TMEM47	0.992	1
RIMBP3	ZNHIT1	0.992	1
RIMBP3	Del_11q23.1	0.992	1
RIN1	SLC6A14	0.992	1
RIN1	TDG	0.992	1
RIN1	ZNF521	0.992	1
RNF113B	SLC6A14	0.992	1
RNF113B	TDG	0.992	1
RNF113B	ZNF521	0.992	1
RNF144A	SLC6A14	0.992	1
RNF144A	TDG	0.992	1
RNF144A	ZNF521	0.992	1
SCYL1	Del_9p23	0.992	1
SLC6A14	TMEM47	0.992	1
SLC6A14	ZNHIT1	0.992	1
SLC6A14	Del_13q12.13	0.992	1
SYNE1	Del_9p23	0.992	1
TDG	TMEM47	0.992	1
TDG	ZNHIT1	0.992	1
TMEM47	ZNF521	0.992	1
TP53	Xp-Del	0.992	1
VCL	16q-Amp	0.992	1
VCL	Del_9p23	0.992	1
ZNF521	ZNHIT1	0.992	1
ZNF814	17q-Amp	0.992	1
5p-Amp	Del_14q31.1	0.992	1
9p-Del	Amp_Xp22.2	0.992	1
Del_4q34.3	Del_10q23.31	0.992	1
Del_4q34.3	Del_11q23.1	0.992	1
Del_9p23	Del_19p13.3	0.992	1
Del_14q31.1	Del_19p13.3	0.992	1
ARAP3	Amp_2q32.1	0.993	1
ARHGAP33	3p-Amp	0.993	1
ARHGAP33	6q-Del	0.993	1
ATM	3q-Del	0.993	1
C16orf78	5p-Amp	0.993	1
C16orf78	5q-Amp	0.993	1
CSGALNACT2	6p-Del	0.993	1
CSGALNACT2	Amp_3q26.32	0.993	1
ECHDC2	3q-Del	0.993	1
EMG1	6q-Del	0.993	1
ENO1	MUC5B	0.993	1
ENO1	3q-Del	0.993	1
GALNT7	Del_16q23.3	0.993	1
GPR50	16q-Amp	0.993	1
GPR50	8p-Del	0.993	1
IMPA2	SETD2	0.993	1
KDM5C	Del_3p21.2	0.993	1
KDM6A	SYNE1	0.993	1
KIF16B	9q-Del	0.993	1
MUC5B	MYF6	0.993	1
MUC5B	PRODH	0.993	1
MUC5B	Del_11q21	0.993	1
NF1	Del_4q34.3	0.993	1
PHF10	1q-Del	0.993	1
PLXDC2	17p-Amp	0.993	1
PTEN	6q-Del	0.993	1
SETD2	SLC14A1	0.993	1
SLC14A1	5p-Amp	0.993	1
SLC14A1	5q-Amp	0.993	1
SLC1A7	5p-Amp	0.993	1
SLC1A7	5q-Amp	0.993	1
SLC6A14	16q-Amp	0.993	1
SMARCA4	Amp_3q26.32	0.993	1
SMARCB1	14q-Del	0.993	1
SMARCB1	Del_16q23.3	0.993	1
STXBP3	Amp_2q32.1	0.993	1
STXBP3	Amp_17q25.2	0.993	1
SYNE1	Del_19p13.3	0.993	1
TDG	16q-Amp	0.993	1
VHL	Del_14q31.1	0.993	1
ZNF521	16q-Amp	0.993	1
ZNF814	16p-Amp	0.993	1
ZNF814	18q-Del	0.993	1
13q-Del	Del_11q21	0.993	1
14q-Del	Del_1p31.1	0.993	1
18q-Del	Del_16q23.3	0.993	1
1p-Del	3q-Del	0.993	1
1q-Del	Del_8p23.2	0.993	1
21q-Del	Amp_2q32.1	0.993	1
3q-Del	Del_9p23	0.993	1
9p-Del	Del_1p31.1	0.993	1
Amp_2q32.1	Amp_Xq11.2	0.993	1
Del_3p21.2	Del_6q22.31	0.993	1
Del_9p23	Del_13q12.13	0.993	1
Del_9p21.3	Del_13q14.2	0.993	1
ADAM28	C16orf78	0.994	1
ADAM28	C9orf171	0.994	1
ADAM28	CXorf23	0.994	1
ADAM28	IMPA2	0.994	1
ADAM28	INPP5E	0.994	1
ADAM28	KIF16B	0.994	1
ADAM28	OR10G3	0.994	1
ADAM28	PHF10	0.994	1
ADAM28	SCYL1	0.994	1
ADAM28	SLC14A1	0.994	1
ADAM28	SLC1A7	0.994	1
ADAM28	SPATA13	0.994	1
ADAM28	VCL	0.994	1
ARAP3	CARKD	0.994	1
ARAP3	CDCA8	0.994	1
ARAP3	DPYSL4	0.994	1
ARAP3	F2RL1	0.994	1
ARAP3	FLCN	0.994	1
ARAP3	IFNB1	0.994	1
ARAP3	KCNK1	0.994	1
ARAP3	NDUFA3	0.994	1
ARAP3	NEK8	0.994	1
ARAP3	NKX2-1	0.994	1
ARAP3	ONECUT2	0.994	1
ARAP3	PDLIM4	0.994	1
ARAP3	PRDX5	0.994	1
ARAP3	RALB	0.994	1
ARAP3	RCN1	0.994	1
ARAP3	RNF113B	0.994	1
ARAP3	RNF144A	0.994	1
ARAP3	TMEM47	0.994	1
ARAP3	ZNHIT1	0.994	1
ARAP3	2q-Amp	0.994	1
ARAP3	Del_3p14.1	0.994	1
ARHGAP33	CARKD	0.994	1
ARHGAP33	CDCA8	0.994	1
ARHGAP33	DPYSL4	0.994	1
ARHGAP33	F2RL1	0.994	1
ARHGAP33	FLCN	0.994	1
ARHGAP33	IFNB1	0.994	1
ARHGAP33	KCNK1	0.994	1
ARHGAP33	NDUFA3	0.994	1
ARHGAP33	NEK8	0.994	1
ARHGAP33	NKX2-1	0.994	1
ARHGAP33	ONECUT2	0.994	1
ARHGAP33	PDLIM4	0.994	1
ARHGAP33	PRDX5	0.994	1
ARHGAP33	RALB	0.994	1
ARHGAP33	RCN1	0.994	1
ARHGAP33	RIN1	0.994	1
ARHGAP33	RNF113B	0.994	1
ARHGAP33	RNF144A	0.994	1
ARHGAP33	TMEM47	0.994	1
ARHGAP33	ZNHIT1	0.994	1
C16orf78	C9orf171	0.994	1
C16orf78	CXorf23	0.994	1
C16orf78	IMPA2	0.994	1
C16orf78	INPP5E	0.994	1
C16orf78	KIF16B	0.994	1
C16orf78	OR10G3	0.994	1
C16orf78	PHF10	0.994	1
C16orf78	SCYL1	0.994	1
C16orf78	SLC14A1	0.994	1
C16orf78	SLC1A7	0.994	1
C16orf78	SPATA13	0.994	1
C16orf78	VCL	0.994	1
C16orf78	12p-Amp	0.994	1
C16orf78	12q-Amp	0.994	1
C16orf78	9p-Del	0.994	1
C9orf171	CXorf23	0.994	1
C9orf171	IMPA2	0.994	1
C9orf171	INPP5E	0.994	1
C9orf171	KIF16B	0.994	1
C9orf171	OR10G3	0.994	1
C9orf171	PHF10	0.994	1
C9orf171	SCYL1	0.994	1
C9orf171	SLC14A1	0.994	1
C9orf171	SLC1A7	0.994	1
C9orf171	SPATA13	0.994	1
C9orf171	VCL	0.994	1
CARKD	CSK	0.994	1
CARKD	EMG1	0.994	1
CARKD	FAM160B2	0.994	1
CARKD	STXBP3	0.994	1
CARKD	ZNF532	0.994	1
CARKD	Amp_Xq11.2	0.994	1
CDCA8	CSK	0.994	1
CDCA8	EMG1	0.994	1
CDCA8	FAM160B2	0.994	1
CDCA8	STXBP3	0.994	1
CDCA8	ZNF532	0.994	1
CDCA8	Amp_Xq11.2	0.994	1
CSGALNACT2	KDM6A	0.994	1
CSK	DPYSL4	0.994	1
CSK	F2RL1	0.994	1
CSK	FLCN	0.994	1
CSK	IFNB1	0.994	1
CSK	KCNK1	0.994	1
CSK	NDUFA3	0.994	1
CSK	NEK8	0.994	1
CSK	NKX2-1	0.994	1
CSK	ONECUT2	0.994	1
CSK	PDLIM4	0.994	1
CSK	PRDX5	0.994	1
CSK	RALB	0.994	1
CSK	RCN1	0.994	1
CSK	RIN1	0.994	1
CSK	RNF113B	0.994	1
CSK	RNF144A	0.994	1
CSK	TMEM47	0.994	1
CSK	ZNHIT1	0.994	1
CXorf23	IMPA2	0.994	1
CXorf23	INPP5E	0.994	1
CXorf23	KIF16B	0.994	1
CXorf23	OR10G3	0.994	1
CXorf23	PHF10	0.994	1
CXorf23	SCYL1	0.994	1
CXorf23	SLC14A1	0.994	1
CXorf23	SLC1A7	0.994	1
CXorf23	SPATA13	0.994	1
CXorf23	VCL	0.994	1
CYP4F11	Del_3p21.2	0.994	1
DPYSL4	EMG1	0.994	1
DPYSL4	FAM160B2	0.994	1
DPYSL4	STXBP3	0.994	1
DPYSL4	ZNF532	0.994	1
DPYSL4	Amp_Xq11.2	0.994	1
EMG1	F2RL1	0.994	1
EMG1	FLCN	0.994	1
EMG1	IFNB1	0.994	1
EMG1	KCNK1	0.994	1
EMG1	NDUFA3	0.994	1
EMG1	NEK8	0.994	1
EMG1	NKX2-1	0.994	1
EMG1	ONECUT2	0.994	1
EMG1	PDLIM4	0.994	1
EMG1	PRDX5	0.994	1
EMG1	RALB	0.994	1
EMG1	RCN1	0.994	1
EMG1	RIN1	0.994	1
EMG1	RNF113B	0.994	1
EMG1	RNF144A	0.994	1
EMG1	TMEM47	0.994	1
EMG1	ZNHIT1	0.994	1
F2RL1	FAM160B2	0.994	1
F2RL1	STXBP3	0.994	1
F2RL1	ZNF532	0.994	1
F2RL1	Amp_Xq11.2	0.994	1
FAM160B2	FLCN	0.994	1
FAM160B2	IFNB1	0.994	1
FAM160B2	KCNK1	0.994	1
FAM160B2	NDUFA3	0.994	1
FAM160B2	NEK8	0.994	1
FAM160B2	NKX2-1	0.994	1
FAM160B2	ONECUT2	0.994	1
FAM160B2	PDLIM4	0.994	1
FAM160B2	PRDX5	0.994	1
FAM160B2	RALB	0.994	1
FAM160B2	RCN1	0.994	1
FAM160B2	RIN1	0.994	1
FAM160B2	RNF113B	0.994	1
FAM160B2	RNF144A	0.994	1
FAM160B2	TMEM47	0.994	1
FAM160B2	ZNHIT1	0.994	1
FAM18B2	SMARCA4	0.994	1
FAM18B2	Amp_2q32.1	0.994	1
FAM18B2	Amp_19p13.2	0.994	1
FLCN	STXBP3	0.994	1
FLCN	ZNF532	0.994	1
FLCN	Amp_Xq11.2	0.994	1
GPR50	Del_9p23	0.994	1
GPR50	Del_11q21	0.994	1
HNRNPM	SMARCB1	0.994	1
IFNB1	STXBP3	0.994	1
IFNB1	ZNF532	0.994	1
IFNB1	Amp_Xq11.2	0.994	1
IMPA2	INPP5E	0.994	1
IMPA2	KIF16B	0.994	1
IMPA2	OR10G3	0.994	1
IMPA2	PHF10	0.994	1
IMPA2	SCYL1	0.994	1
IMPA2	SLC14A1	0.994	1
IMPA2	SLC1A7	0.994	1
IMPA2	SPATA13	0.994	1
IMPA2	VCL	0.994	1
IMPA2	13q-Del	0.994	1
INPP5E	KIF16B	0.994	1
INPP5E	OR10G3	0.994	1
INPP5E	PHF10	0.994	1
INPP5E	SCYL1	0.994	1
INPP5E	SLC14A1	0.994	1
INPP5E	SLC1A7	0.994	1
INPP5E	SPATA13	0.994	1
INPP5E	VCL	0.994	1
INPP5E	12p-Amp	0.994	1
INPP5E	12q-Amp	0.994	1
INPP5E	21q-Del	0.994	1
KCNK1	STXBP3	0.994	1
KCNK1	ZNF532	0.994	1
KCNK1	Amp_Xq11.2	0.994	1
KDELR3	20p-Amp	0.994	1
KDELR3	20q-Amp	0.994	1
KDM5C	PBRM1	0.994	1
KIF16B	OR10G3	0.994	1
KIF16B	PHF10	0.994	1
KIF16B	SCYL1	0.994	1
KIF16B	SLC14A1	0.994	1
KIF16B	SLC1A7	0.994	1
KIF16B	SPATA13	0.994	1
KIF16B	VCL	0.994	1
NDUFA3	STXBP3	0.994	1
NDUFA3	ZNF532	0.994	1
NDUFA3	Amp_Xq11.2	0.994	1
NEK8	STXBP3	0.994	1
NEK8	ZNF532	0.994	1
NEK8	Amp_Xq11.2	0.994	1
NKX2-1	STXBP3	0.994	1
NKX2-1	ZNF532	0.994	1
NKX2-1	Amp_Xq11.2	0.994	1
ONECUT2	STXBP3	0.994	1
ONECUT2	ZNF532	0.994	1
ONECUT2	Amp_Xq11.2	0.994	1
OR10G3	PHF10	0.994	1
OR10G3	SCYL1	0.994	1
OR10G3	SLC14A1	0.994	1
OR10G3	SLC1A7	0.994	1
OR10G3	SPATA13	0.994	1
OR10G3	VCL	0.994	1
PDLIM4	STXBP3	0.994	1
PDLIM4	ZNF532	0.994	1
PDLIM4	Amp_Xq11.2	0.994	1
PHF10	SCYL1	0.994	1
PHF10	SLC14A1	0.994	1
PHF10	SLC1A7	0.994	1
PHF10	SPATA13	0.994	1
PHF10	VCL	0.994	1
PHF10	13q-Del	0.994	1
PRDX5	STXBP3	0.994	1
PRDX5	ZNF532	0.994	1
PRDX5	Amp_Xq11.2	0.994	1
PRKAG2	STAG2	0.994	1
PTEN	17p-Del	0.994	1
PTEN	Del_1p36.31	0.994	1
RALB	STXBP3	0.994	1
RALB	ZNF532	0.994	1
RALB	Amp_Xq11.2	0.994	1
RCN1	STXBP3	0.994	1
RCN1	ZNF532	0.994	1
RCN1	Amp_Xq11.2	0.994	1
RIN1	STXBP3	0.994	1
RIN1	ZNF532	0.994	1
RIN1	Amp_Xq11.2	0.994	1
RNF113B	STXBP3	0.994	1
RNF113B	ZNF532	0.994	1
RNF113B	Amp_Xq11.2	0.994	1
RNF144A	STXBP3	0.994	1
RNF144A	ZNF532	0.994	1
RNF144A	Amp_Xq11.2	0.994	1
SCYL1	SLC14A1	0.994	1
SCYL1	SPATA13	0.994	1
SCYL1	VCL	0.994	1
SCYL1	9p-Del	0.994	1
SETD2	SYNE1	0.994	1
SETD2	Del_3p26.3	0.994	1
SETD2	Del_4q34.3	0.994	1
SLC14A1	SLC1A7	0.994	1
SLC14A1	SPATA13	0.994	1
SLC14A1	VCL	0.994	1
SLC14A1	21q-Del	0.994	1
SLC1A7	SPATA13	0.994	1
SLC1A7	VCL	0.994	1
SLC1A7	12p-Amp	0.994	1
SLC1A7	21q-Del	0.994	1
SLC6A14	Del_13q14.2	0.994	1
SMARCA4	Amp_7q31.2	0.994	1
SPATA13	VCL	0.994	1
STXBP3	TMEM47	0.994	1
STXBP3	ZNHIT1	0.994	1
STXBP3	2q-Amp	0.994	1
TMEM47	ZNF532	0.994	1
TMEM47	Amp_Xq11.2	0.994	1
VCL	9p-Del	0.994	1
ZNF532	ZNHIT1	0.994	1
ZNF598	Amp_2q32.1	0.994	1
ZNF814	Del_11q23.1	0.994	1
ZNHIT1	Amp_Xq11.2	0.994	1
2q-Amp	Amp_19p13.2	0.994	1
2q-Amp	Amp_Xq11.2	0.994	1
3p-Amp	21q-Del	0.994	1
5p-Amp	Amp_7q31.2	0.994	1
5q-Amp	Amp_7q31.2	0.994	1
7q-Amp	Amp_5q35.1	0.994	1
18p-Del	Del_3p12.2	0.994	1
18p-Del	Del_9p23	0.994	1
18p-Del	Del_16q23.3	0.994	1
18q-Del	Del_4q34.3	0.994	1
3q-Del	Del_1p36.31	0.994	1
6q-Del	Del_3p14.1	0.994	1
Amp_17q25.2	Amp_Xp11.4	0.994	1
Del_1p36.31	Del_16q23.3	0.994	1
Del_1p31.1	Del_9p21.3	0.994	1
Del_1q43	Del_8p23.2	0.994	1
Del_4q34.3	Del_6q26	0.994	1
Del_9p23	Del_11q23.1	0.994	1
Del_9p21.3	Del_10q23.31	0.994	1
Del_11q23.1	Del_16q23.3	0.994	1
ARAP3	3p-Del	0.995	1
ARHGAP33	6p-Del	0.995	1
ARHGAP33	Del_10q23.31	0.995	1
ATM	NTRK3	0.995	1
ATM	RIMBP3	0.995	1
C16orf78	20p-Amp	0.995	1
C16orf78	20q-Amp	0.995	1
C9orf171	20p-Amp	0.995	1
C9orf171	20q-Amp	0.995	1
CARKD	CDKN2A	0.995	1
CARKD	ECHDC2	0.995	1
CARKD	EDIL3	0.995	1
CARKD	ENO1	0.995	1
CARKD	FZR1	0.995	1
CARKD	HSPA2	0.995	1
CARKD	KLK10	0.995	1
CARKD	KRAS	0.995	1
CARKD	MYF6	0.995	1
CARKD	PRODH	0.995	1
CARKD	Xp-Del	0.995	1
CDCA8	CDKN2A	0.995	1
CDCA8	ECHDC2	0.995	1
CDCA8	EDIL3	0.995	1
CDCA8	ENO1	0.995	1
CDCA8	FZR1	0.995	1
CDCA8	HSPA2	0.995	1
CDCA8	KLK10	0.995	1
CDCA8	KRAS	0.995	1
CDCA8	MYF6	0.995	1
CDCA8	PRODH	0.995	1
CDCA8	Xp-Del	0.995	1
CDKN2A	DPYSL4	0.995	1
CDKN2A	F2RL1	0.995	1
CDKN2A	FLCN	0.995	1
CDKN2A	IFNB1	0.995	1
CDKN2A	KCNK1	0.995	1
CDKN2A	NDUFA3	0.995	1
CDKN2A	NEK8	0.995	1
CDKN2A	NKX2-1	0.995	1
CDKN2A	ONECUT2	0.995	1
CDKN2A	PDLIM4	0.995	1
CDKN2A	PRDX5	0.995	1
CDKN2A	RALB	0.995	1
CDKN2A	RCN1	0.995	1
CDKN2A	RIN1	0.995	1
CDKN2A	RNF113B	0.995	1
CDKN2A	RNF144A	0.995	1
CDKN2A	TMEM47	0.995	1
CDKN2A	ZNHIT1	0.995	1
CDKN2A	Del_4q34.3	0.995	1
CSGALNACT2	Del_2q37.3	0.995	1
CYP4F11	5p-Amp	0.995	1
CYP4F11	5q-Amp	0.995	1
CYP4F11	Del_3p26.3	0.995	1
DPYSL4	ECHDC2	0.995	1
DPYSL4	EDIL3	0.995	1
DPYSL4	FZR1	0.995	1
DPYSL4	HSPA2	0.995	1
DPYSL4	KLK10	0.995	1
DPYSL4	KRAS	0.995	1
DPYSL4	MYF6	0.995	1
DPYSL4	PRODH	0.995	1
DPYSL4	Xp-Del	0.995	1
ECHDC2	F2RL1	0.995	1
ECHDC2	FLCN	0.995	1
ECHDC2	IFNB1	0.995	1
ECHDC2	KCNK1	0.995	1
ECHDC2	NDUFA3	0.995	1
ECHDC2	NKX2-1	0.995	1
ECHDC2	ONECUT2	0.995	1
ECHDC2	PDLIM4	0.995	1
ECHDC2	PRDX5	0.995	1
ECHDC2	RALB	0.995	1
ECHDC2	RCN1	0.995	1
ECHDC2	RIN1	0.995	1
ECHDC2	RNF113B	0.995	1
ECHDC2	RNF144A	0.995	1
ECHDC2	TMEM47	0.995	1
ECHDC2	ZNHIT1	0.995	1
EDIL3	F2RL1	0.995	1
EDIL3	FLCN	0.995	1
EDIL3	IFNB1	0.995	1
EDIL3	KCNK1	0.995	1
EDIL3	NDUFA3	0.995	1
EDIL3	NEK8	0.995	1
EDIL3	NKX2-1	0.995	1
EDIL3	ONECUT2	0.995	1
EDIL3	PDLIM4	0.995	1
EDIL3	PRDX5	0.995	1
EDIL3	RALB	0.995	1
EDIL3	RCN1	0.995	1
EDIL3	RIN1	0.995	1
EDIL3	RNF113B	0.995	1
EDIL3	RNF144A	0.995	1
EDIL3	SYNE1	0.995	1
EDIL3	TMEM47	0.995	1
EDIL3	ZNHIT1	0.995	1
EMG1	6p-Del	0.995	1
ENO1	F2RL1	0.995	1
ENO1	FLCN	0.995	1
ENO1	IFNB1	0.995	1
ENO1	KCNK1	0.995	1
ENO1	KDM5C	0.995	1
ENO1	NDUFA3	0.995	1
ENO1	NEK8	0.995	1
ENO1	NKX2-1	0.995	1
ENO1	ONECUT2	0.995	1
ENO1	PDLIM4	0.995	1
ENO1	PRDX5	0.995	1
ENO1	RALB	0.995	1
ENO1	RCN1	0.995	1
ENO1	RIN1	0.995	1
ENO1	RNF113B	0.995	1
ENO1	RNF144A	0.995	1
ENO1	SYNE1	0.995	1
ENO1	TMEM47	0.995	1
ENO1	ZNHIT1	0.995	1
F2RL1	FZR1	0.995	1
F2RL1	HSPA2	0.995	1
F2RL1	KLK10	0.995	1
F2RL1	KRAS	0.995	1
F2RL1	MYF6	0.995	1
F2RL1	PRODH	0.995	1
F2RL1	Xp-Del	0.995	1
FLCN	FZR1	0.995	1
FLCN	HSPA2	0.995	1
FLCN	KLK10	0.995	1
FLCN	KRAS	0.995	1
FLCN	MYF6	0.995	1
FLCN	PRODH	0.995	1
FLCN	Xp-Del	0.995	1
FZR1	IFNB1	0.995	1
FZR1	NDUFA3	0.995	1
FZR1	NEK8	0.995	1
FZR1	NKX2-1	0.995	1
FZR1	ONECUT2	0.995	1
FZR1	PDLIM4	0.995	1
FZR1	PRDX5	0.995	1
FZR1	RALB	0.995	1
FZR1	RCN1	0.995	1
FZR1	RIN1	0.995	1
FZR1	RNF113B	0.995	1
FZR1	RNF144A	0.995	1
FZR1	SYNE1	0.995	1
FZR1	TMEM47	0.995	1
FZR1	ZNHIT1	0.995	1
GPR50	SMARCA4	0.995	1
GPR50	9q-Del	0.995	1
HSPA2	IFNB1	0.995	1
HSPA2	KCNK1	0.995	1
HSPA2	NDUFA3	0.995	1
HSPA2	NEK8	0.995	1
HSPA2	NKX2-1	0.995	1
HSPA2	ONECUT2	0.995	1
HSPA2	PDLIM4	0.995	1
HSPA2	PRDX5	0.995	1
HSPA2	RALB	0.995	1
HSPA2	RCN1	0.995	1
HSPA2	RIN1	0.995	1
HSPA2	RNF113B	0.995	1
HSPA2	RNF144A	0.995	1
HSPA2	TMEM47	0.995	1
HSPA2	ZNHIT1	0.995	1
IFNB1	KLK10	0.995	1
IFNB1	KRAS	0.995	1
IFNB1	MYF6	0.995	1
IFNB1	PRODH	0.995	1
IFNB1	Xp-Del	0.995	1
IMPA2	20p-Amp	0.995	1
IMPA2	20q-Amp	0.995	1
KCNK1	KLK10	0.995	1
KCNK1	KRAS	0.995	1
KCNK1	MYF6	0.995	1
KCNK1	PRODH	0.995	1
KCNK1	Xp-Del	0.995	1
KDELR3	Del_16q23.3	0.995	1
KLK10	NDUFA3	0.995	1
KLK10	NEK8	0.995	1
KLK10	NKX2-1	0.995	1
KLK10	ONECUT2	0.995	1
KLK10	PDLIM4	0.995	1
KLK10	PRDX5	0.995	1
KLK10	RALB	0.995	1
KLK10	RCN1	0.995	1
KLK10	RIN1	0.995	1
KLK10	RNF113B	0.995	1
KLK10	RNF144A	0.995	1
KLK10	TMEM47	0.995	1
KLK10	ZNHIT1	0.995	1
KRAS	NDUFA3	0.995	1
KRAS	NEK8	0.995	1
KRAS	NKX2-1	0.995	1
KRAS	ONECUT2	0.995	1
KRAS	PDLIM4	0.995	1
KRAS	PRDX5	0.995	1
KRAS	RALB	0.995	1
KRAS	RCN1	0.995	1
KRAS	RIN1	0.995	1
KRAS	RNF113B	0.995	1
KRAS	RNF144A	0.995	1
KRAS	TMEM47	0.995	1
KRAS	ZNHIT1	0.995	1
MET	SYNE1	0.995	1
MET	Amp_7q31.2	0.995	1
MET	Del_4q34.3	0.995	1
MTOR	Del_9p23	0.995	1
MUC5B	6p-Del	0.995	1
MUC5B	Del_13q14.2	0.995	1
MYF6	NDUFA3	0.995	1
MYF6	NEK8	0.995	1
MYF6	NKX2-1	0.995	1
MYF6	ONECUT2	0.995	1
MYF6	PDLIM4	0.995	1
MYF6	PRDX5	0.995	1
MYF6	RALB	0.995	1
MYF6	RCN1	0.995	1
MYF6	RIN1	0.995	1
MYF6	RNF113B	0.995	1
MYF6	RNF144A	0.995	1
MYF6	TMEM47	0.995	1
MYF6	ZNHIT1	0.995	1
NDUFA3	PRODH	0.995	1
NDUFA3	Xp-Del	0.995	1
NEK8	PRODH	0.995	1
NEK8	Xp-Del	0.995	1
NF1	PTEN	0.995	1
NF2	NUDT11	0.995	1
NKX2-1	PRODH	0.995	1
NKX2-1	Xp-Del	0.995	1
NTRK3	SETD2	0.995	1
NUDT11	5q-Amp	0.995	1
ONECUT2	PRODH	0.995	1
ONECUT2	Xp-Del	0.995	1
PDLIM4	PRODH	0.995	1
PDLIM4	Xp-Del	0.995	1
PRDX5	PRODH	0.995	1
PRDX5	Xp-Del	0.995	1
PRODH	RALB	0.995	1
PRODH	RCN1	0.995	1
PRODH	RIN1	0.995	1
PRODH	RNF113B	0.995	1
PRODH	RNF144A	0.995	1
PRODH	TMEM47	0.995	1
PRODH	ZNHIT1	0.995	1
PRODH	3q-Amp	0.995	1
PRODH	Amp_7q31.2	0.995	1
PRODH	Del_4q34.3	0.995	1
RALB	Xp-Del	0.995	1
RCN1	Xp-Del	0.995	1
RIMBP3	SMARCA4	0.995	1
RIN1	Xp-Del	0.995	1
RNF113B	Xp-Del	0.995	1
RNF144A	Xp-Del	0.995	1
SLC1A7	20p-Amp	0.995	1
SLC1A7	20q-Amp	0.995	1
SMARCA4	TDG	0.995	1
SMARCA4	7p-Amp	0.995	1
SMARCA4	7q-Amp	0.995	1
SMARCB1	Amp_3q26.32	0.995	1
STAM	Del_6q22.31	0.995	1
SYNE1	9p-Del	0.995	1
TDG	5q-Amp	0.995	1
TMEM47	Xp-Del	0.995	1
ZNF814	17p-Amp	0.995	1
ZNHIT1	Xp-Del	0.995	1
2q-Amp	21q-Del	0.995	1
10q-Del	9p-Del	0.995	1
13q-Del	9p-Del	0.995	1
14q-Del	18q-Del	0.995	1
14q-Del	Del_19p13.3	0.995	1
17p-Del	Del_9p23	0.995	1
21q-Del	Del_19p13.3	0.995	1
3p-Del	Del_4q34.3	0.995	1
9p-Del	Del_13q14.2	0.995	1
9p-Del	Del_19p13.3	0.995	1
Del_8p23.2	Del_9p23	0.995	1
ARAP3	Del_2q37.3	0.996	1
ARHGAP33	10q-Del	0.996	1
ARHGAP33	Del_2q37.3	0.996	1
C16orf78	18p-Del	0.996	1
C16orf78	18q-Del	0.996	1
CDKN2A	Amp_2q32.1	0.996	1
CSGALNACT2	17p-Del	0.996	1
EGFR	PIK3CA	0.996	1
EMG1	Del_2q37.3	0.996	1
EMG1	Del_8p23.2	0.996	1
ENO1	Amp_19p13.2	0.996	1
FAM160B2	MET	0.996	1
GPR50	12p-Amp	0.996	1
GPR50	12q-Amp	0.996	1
GPR50	9p-Del	0.996	1
KDM5C	Del_3p26.3	0.996	1
KIF16B	18p-Del	0.996	1
KIF16B	18q-Del	0.996	1
MET	7p-Amp	0.996	1
MET	7q-Amp	0.996	1
MUC5B	17q-Amp	0.996	1
MUC5B	3p-Amp	0.996	1
MUC5B	Amp_17q25.2	0.996	1
NEFH	17q-Amp	0.996	1
NF1	RAI1	0.996	1
NF1	SMARCB1	0.996	1
NF2	STAG2	0.996	1
NF2	1p-Del	0.996	1
NF2	Del_1p36.31	0.996	1
NFE2L2	PTCH1	0.996	1
NFE2L2	SMARCB1	0.996	1
NFE2L2	Amp_Xp11.4	0.996	1
PRODH	7p-Amp	0.996	1
PRODH	7q-Amp	0.996	1
PTEN	Del_10q23.31	0.996	1
RAI1	TP53	0.996	1
RAI1	Del_19p13.3	0.996	1
SCYL1	18p-Del	0.996	1
SCYL1	18q-Del	0.996	1
SLC6A14	STAG2	0.996	1
SLC6A14	13q-Del	0.996	1
SMARCA4	12p-Amp	0.996	1
SMARCB1	Del_19p13.3	0.996	1
SPATA13	18p-Del	0.996	1
SPATA13	18q-Del	0.996	1
STXBP3	17q-Amp	0.996	1
TP53	18q-Del	0.996	1
ZNF598	2q-Amp	0.996	1
5p-Amp	7q-Amp	0.996	1
5q-Amp	7q-Amp	0.996	1
13q-Del	Del_9p23	0.996	1
18q-Del	Del_3p12.2	0.996	1
21q-Del	Del_4q34.3	0.996	1
3q-Del	9p-Del	0.996	1
3q-Del	9q-Del	0.996	1
Xp-Del	Amp_2q32.1	0.996	1
Xp-Del	Amp_19p13.2	0.996	1
Amp_Xq11.2	Del_8p23.2	0.996	1
Del_1p31.1	Del_16q23.3	0.996	1
Del_1q43	Del_16q23.3	0.996	1
Del_2q37.3	Del_9p23	0.996	1
Del_3p26.3	Del_4q34.3	0.996	1
Del_4q34.3	Del_11q21	0.996	1
Del_9p23	Del_13q14.2	0.996	1
ADAM28	CARKD	0.997	1
ADAM28	CDCA8	0.997	1
ADAM28	DPYSL4	0.997	1
ADAM28	F2RL1	0.997	1
ADAM28	FLCN	0.997	1
ADAM28	IFNB1	0.997	1
ADAM28	KCNK1	0.997	1
ADAM28	NDUFA3	0.997	1
ADAM28	NEK8	0.997	1
ADAM28	NKX2-1	0.997	1
ADAM28	ONECUT2	0.997	1
ADAM28	PDLIM4	0.997	1
ADAM28	PRDX5	0.997	1
ADAM28	RALB	0.997	1
ADAM28	RCN1	0.997	1
ADAM28	RIN1	0.997	1
ADAM28	RNF113B	0.997	1
ADAM28	RNF144A	0.997	1
ADAM28	TMEM47	0.997	1
ADAM28	ZNHIT1	0.997	1
ATM	FAM160B2	0.997	1
C16orf78	CARKD	0.997	1
C16orf78	CDCA8	0.997	1
C16orf78	DPYSL4	0.997	1
C16orf78	F2RL1	0.997	1
C16orf78	FLCN	0.997	1
C16orf78	IFNB1	0.997	1
C16orf78	KCNK1	0.997	1
C16orf78	NDUFA3	0.997	1
C16orf78	NEK8	0.997	1
C16orf78	NKX2-1	0.997	1
C16orf78	ONECUT2	0.997	1
C16orf78	PDLIM4	0.997	1
C16orf78	PRDX5	0.997	1
C16orf78	RALB	0.997	1
C16orf78	RCN1	0.997	1
C16orf78	RIN1	0.997	1
C16orf78	RNF113B	0.997	1
C16orf78	RNF144A	0.997	1
C16orf78	TMEM47	0.997	1
C16orf78	ZNHIT1	0.997	1
C9orf171	CARKD	0.997	1
C9orf171	CDCA8	0.997	1
C9orf171	DPYSL4	0.997	1
C9orf171	F2RL1	0.997	1
C9orf171	FLCN	0.997	1
C9orf171	IFNB1	0.997	1
C9orf171	KCNK1	0.997	1
C9orf171	NDUFA3	0.997	1
C9orf171	NEK8	0.997	1
C9orf171	NKX2-1	0.997	1
C9orf171	ONECUT2	0.997	1
C9orf171	PDLIM4	0.997	1
C9orf171	PRDX5	0.997	1
C9orf171	RALB	0.997	1
C9orf171	RCN1	0.997	1
C9orf171	RIN1	0.997	1
C9orf171	RNF144A	0.997	1
C9orf171	TMEM47	0.997	1
CARKD	CXorf23	0.997	1
CARKD	IMPA2	0.997	1
CARKD	INPP5E	0.997	1
CARKD	KIF16B	0.997	1
CARKD	OR10G3	0.997	1
CARKD	PHF10	0.997	1
CARKD	SCYL1	0.997	1
CARKD	SLC14A1	0.997	1
CARKD	SLC1A7	0.997	1
CARKD	SPATA13	0.997	1
CARKD	VCL	0.997	1
CDCA8	CXorf23	0.997	1
CDCA8	IMPA2	0.997	1
CDCA8	INPP5E	0.997	1
CDCA8	KIF16B	0.997	1
CDCA8	OR10G3	0.997	1
CDCA8	SCYL1	0.997	1
CDCA8	SLC14A1	0.997	1
CDCA8	SLC1A7	0.997	1
CDCA8	SPATA13	0.997	1
CDCA8	VCL	0.997	1
CDKN2A	2q-Amp	0.997	1
CXorf23	DPYSL4	0.997	1
CXorf23	F2RL1	0.997	1
CXorf23	FLCN	0.997	1
CXorf23	IFNB1	0.997	1
CXorf23	KCNK1	0.997	1
CXorf23	NDUFA3	0.997	1
CXorf23	NEK8	0.997	1
CXorf23	NKX2-1	0.997	1
CXorf23	ONECUT2	0.997	1
CXorf23	PDLIM4	0.997	1
CXorf23	PRDX5	0.997	1
CXorf23	RALB	0.997	1
CXorf23	RCN1	0.997	1
CXorf23	RIN1	0.997	1
CXorf23	RNF113B	0.997	1
CXorf23	RNF144A	0.997	1
CXorf23	TMEM47	0.997	1
CXorf23	ZNHIT1	0.997	1
DPCR1	Amp_Xp11.4	0.997	1
DPYSL4	IMPA2	0.997	1
DPYSL4	INPP5E	0.997	1
DPYSL4	KIF16B	0.997	1
DPYSL4	OR10G3	0.997	1
DPYSL4	PHF10	0.997	1
DPYSL4	SCYL1	0.997	1
DPYSL4	SLC14A1	0.997	1
DPYSL4	SLC1A7	0.997	1
DPYSL4	VCL	0.997	1
EMG1	17p-Del	0.997	1
EMG1	8p-Del	0.997	1
EMG1	Del_13q12.13	0.997	1
EMG1	Del_13q14.2	0.997	1
ENO1	Del_11q23.1	0.997	1
F2RL1	IMPA2	0.997	1
F2RL1	INPP5E	0.997	1
F2RL1	KIF16B	0.997	1
F2RL1	OR10G3	0.997	1
F2RL1	PHF10	0.997	1
F2RL1	SLC14A1	0.997	1
F2RL1	SPATA13	0.997	1
F2RL1	VCL	0.997	1
FAM18B2	SLC14A1	0.997	1
FAM18B2	SPATA13	0.997	1
FLCN	IMPA2	0.997	1
FLCN	INPP5E	0.997	1
FLCN	KIF16B	0.997	1
FLCN	OR10G3	0.997	1
FLCN	PHF10	0.997	1
FLCN	SCYL1	0.997	1
FLCN	SLC14A1	0.997	1
FLCN	SLC1A7	0.997	1
FLCN	SPATA13	0.997	1
FLCN	VCL	0.997	1
GALNT7	ZFYVE26	0.997	1
GPR50	20p-Amp	0.997	1
GPR50	20q-Amp	0.997	1
HNRNPM	TDG	0.997	1
IFNB1	IMPA2	0.997	1
IFNB1	INPP5E	0.997	1
IFNB1	KIF16B	0.997	1
IFNB1	OR10G3	0.997	1
IFNB1	PHF10	0.997	1
IFNB1	SCYL1	0.997	1
IFNB1	SLC14A1	0.997	1
IFNB1	SLC1A7	0.997	1
IFNB1	SPATA13	0.997	1
IFNB1	VCL	0.997	1
IMPA2	KCNK1	0.997	1
IMPA2	NDUFA3	0.997	1
IMPA2	NEK8	0.997	1
IMPA2	NKX2-1	0.997	1
IMPA2	ONECUT2	0.997	1
IMPA2	PDLIM4	0.997	1
IMPA2	PRDX5	0.997	1
IMPA2	RALB	0.997	1
IMPA2	RCN1	0.997	1
IMPA2	RIN1	0.997	1
IMPA2	RNF113B	0.997	1
IMPA2	RNF144A	0.997	1
IMPA2	TMEM47	0.997	1
IMPA2	ZNHIT1	0.997	1
IMPA2	Amp_3q26.32	0.997	1
INPP5E	KCNK1	0.997	1
INPP5E	NDUFA3	0.997	1
INPP5E	NEK8	0.997	1
INPP5E	NKX2-1	0.997	1
INPP5E	ONECUT2	0.997	1
INPP5E	PDLIM4	0.997	1
INPP5E	PRDX5	0.997	1
INPP5E	RALB	0.997	1
INPP5E	RCN1	0.997	1
INPP5E	RIN1	0.997	1
INPP5E	RNF113B	0.997	1
INPP5E	RNF144A	0.997	1
INPP5E	TMEM47	0.997	1
INPP5E	ZNHIT1	0.997	1
KCNK1	KIF16B	0.997	1
KCNK1	OR10G3	0.997	1
KCNK1	PHF10	0.997	1
KCNK1	SCYL1	0.997	1
KCNK1	SLC14A1	0.997	1
KCNK1	SLC1A7	0.997	1
KCNK1	SPATA13	0.997	1
KCNK1	VCL	0.997	1
KDELR3	NF1	0.997	1
KDELR3	Del_19p13.3	0.997	1
KDM5C	PTEN	0.997	1
KIF16B	NDUFA3	0.997	1
KIF16B	NEK8	0.997	1
KIF16B	NKX2-1	0.997	1
KIF16B	ONECUT2	0.997	1
KIF16B	PDLIM4	0.997	1
KIF16B	PRDX5	0.997	1
KIF16B	RALB	0.997	1
KIF16B	RCN1	0.997	1
KIF16B	RIN1	0.997	1
KIF16B	RNF113B	0.997	1
KIF16B	RNF144A	0.997	1
KIF16B	TMEM47	0.997	1
KIF16B	ZNHIT1	0.997	1
KIF16B	3q-Del	0.997	1
MUC5B	16p-Amp	0.997	1
MUC5B	1q-Del	0.997	1
MUC5B	Amp_Xp11.4	0.997	1
NDUFA3	OR10G3	0.997	1
NDUFA3	PHF10	0.997	1
NDUFA3	SCYL1	0.997	1
NDUFA3	SLC14A1	0.997	1
NDUFA3	SLC1A7	0.997	1
NDUFA3	SPATA13	0.997	1
NDUFA3	VCL	0.997	1
NEK8	OR10G3	0.997	1
NEK8	PHF10	0.997	1
NEK8	SCYL1	0.997	1
NEK8	SLC14A1	0.997	1
NEK8	SLC1A7	0.997	1
NEK8	SPATA13	0.997	1
NEK8	VCL	0.997	1
NF2	SYNE1	0.997	1
NF2	Del_1p31.1	0.997	1
NF2	Del_4q34.3	0.997	1
NKX2-1	OR10G3	0.997	1
NKX2-1	PHF10	0.997	1
NKX2-1	SCYL1	0.997	1
NKX2-1	SLC14A1	0.997	1
NKX2-1	SLC1A7	0.997	1
NKX2-1	SPATA13	0.997	1
NKX2-1	VCL	0.997	1
NTRK3	Del_16q23.3	0.997	1
ONECUT2	OR10G3	0.997	1
ONECUT2	PHF10	0.997	1
ONECUT2	SCYL1	0.997	1
ONECUT2	SLC14A1	0.997	1
ONECUT2	SLC1A7	0.997	1
ONECUT2	SPATA13	0.997	1
ONECUT2	VCL	0.997	1
OR10G3	PDLIM4	0.997	1
OR10G3	PRDX5	0.997	1
OR10G3	RALB	0.997	1
OR10G3	RCN1	0.997	1
OR10G3	RIN1	0.997	1
OR10G3	RNF113B	0.997	1
OR10G3	RNF144A	0.997	1
OR10G3	TMEM47	0.997	1
OR10G3	ZNHIT1	0.997	1
PDLIM4	PHF10	0.997	1
PDLIM4	SCYL1	0.997	1
PDLIM4	SLC14A1	0.997	1
PDLIM4	SLC1A7	0.997	1
PDLIM4	SPATA13	0.997	1
PDLIM4	VCL	0.997	1
PHF10	PRDX5	0.997	1
PHF10	RALB	0.997	1
PHF10	RCN1	0.997	1
PHF10	RIN1	0.997	1
PHF10	RNF113B	0.997	1
PHF10	RNF144A	0.997	1
PHF10	TMEM47	0.997	1
PHF10	ZNHIT1	0.997	1
PRDX5	SCYL1	0.997	1
PRDX5	SLC14A1	0.997	1
PRDX5	SLC1A7	0.997	1
PRDX5	SPATA13	0.997	1
PRDX5	VCL	0.997	1
PRODH	3p-Amp	0.997	1
PTEN	6p-Del	0.997	1
PTEN	Del_1p31.1	0.997	1
RALB	SCYL1	0.997	1
RALB	SLC14A1	0.997	1
RALB	SLC1A7	0.997	1
RALB	SPATA13	0.997	1
RALB	VCL	0.997	1
RCN1	SCYL1	0.997	1
RCN1	SLC14A1	0.997	1
RCN1	SLC1A7	0.997	1
RCN1	SPATA13	0.997	1
RCN1	VCL	0.997	1
RIN1	SCYL1	0.997	1
RIN1	SLC14A1	0.997	1
RIN1	SLC1A7	0.997	1
RIN1	SPATA13	0.997	1
RIN1	VCL	0.997	1
RNF113B	SCYL1	0.997	1
RNF113B	SLC14A1	0.997	1
RNF113B	SLC1A7	0.997	1
RNF113B	SPATA13	0.997	1
RNF113B	VCL	0.997	1
RNF144A	SCYL1	0.997	1
RNF144A	SLC14A1	0.997	1
RNF144A	SLC1A7	0.997	1
RNF144A	SPATA13	0.997	1
RNF144A	VCL	0.997	1
SCYL1	TMEM47	0.997	1
SCYL1	ZNHIT1	0.997	1
SLC14A1	TMEM47	0.997	1
SLC14A1	ZNHIT1	0.997	1
SLC14A1	Amp_3q26.32	0.997	1
SLC1A7	TMEM47	0.997	1
SLC1A7	TP53	0.997	1
SLC1A7	ZNHIT1	0.997	1
SMARCA4	12q-Amp	0.997	1
SPATA13	TMEM47	0.997	1
SPATA13	ZNHIT1	0.997	1
STAM	Del_19p13.3	0.997	1
STXBP3	16q-Amp	0.997	1
STXBP3	17p-Amp	0.997	1
TDG	ZNF814	0.997	1
TDG	7p-Amp	0.997	1
TDG	7q-Amp	0.997	1
TDG	Amp_7q31.2	0.997	1
TMEM47	VCL	0.997	1
VCL	ZNHIT1	0.997	1
ZNF521	20p-Amp	0.997	1
ZNF521	20q-Amp	0.997	1
ZNF814	Amp_17q25.2	0.997	1
16p-Amp	Amp_5q35.1	0.997	1
2q-Amp	Xp-Del	0.997	1
14q-Del	8p-Del	0.997	1
18p-Del	9p-Del	0.997	1
1p-Del	9q-Del	0.997	1
3q-Del	Del_1p31.1	0.997	1
3q-Del	Del_9p21.3	0.997	1
8p-Del	Del_14q31.1	0.997	1
9p-Del	Del_10q23.31	0.997	1
9p-Del	Del_11q23.1	0.997	1
Xp-Del	Del_11q23.1	0.997	1
Amp_17q25.2	Amp_Xp22.2	0.997	1
Del_1p31.1	Del_9p23	0.997	1
ARAP3	Del_3p12.2	0.998	1
ARHGAP33	5p-Amp	0.998	1
ARHGAP33	5q-Amp	0.998	1
ARHGAP33	21q-Del	0.998	1
ARHGAP33	Del_16q23.3	0.998	1
ATM	PRODH	0.998	1
CARKD	CDCA8	0.998	1
CARKD	DPYSL4	0.998	1
CARKD	F2RL1	0.998	1
CARKD	FLCN	0.998	1
CARKD	IFNB1	0.998	1
CARKD	KCNK1	0.998	1
CARKD	NDUFA3	0.998	1
CARKD	NEK8	0.998	1
CARKD	NKX2-1	0.998	1
CARKD	ONECUT2	0.998	1
CARKD	PDLIM4	0.998	1
CARKD	PRDX5	0.998	1
CARKD	RALB	0.998	1
CARKD	RCN1	0.998	1
CARKD	RIN1	0.998	1
CARKD	RNF113B	0.998	1
CARKD	RNF144A	0.998	1
CARKD	TMEM47	0.998	1
CARKD	ZNHIT1	0.998	1
CDCA8	DPYSL4	0.998	1
CDCA8	F2RL1	0.998	1
CDCA8	FLCN	0.998	1
CDCA8	IFNB1	0.998	1
CDCA8	KCNK1	0.998	1
CDCA8	NDUFA3	0.998	1
CDCA8	NEK8	0.998	1
CDCA8	NKX2-1	0.998	1
CDCA8	ONECUT2	0.998	1
CDCA8	PDLIM4	0.998	1
CDCA8	PRDX5	0.998	1
CDCA8	RALB	0.998	1
CDCA8	RCN1	0.998	1
CDCA8	RIN1	0.998	1
CDCA8	RNF113B	0.998	1
CDCA8	RNF144A	0.998	1
CDCA8	TMEM47	0.998	1
CDCA8	ZNHIT1	0.998	1
CSGALNACT2	KDELR3	0.998	1
CXorf23	MUC5B	0.998	1
DPCR1	STAM	0.998	1
DPCR1	Amp_Xp22.2	0.998	1
DPYSL4	F2RL1	0.998	1
DPYSL4	FLCN	0.998	1
DPYSL4	IFNB1	0.998	1
DPYSL4	KCNK1	0.998	1
DPYSL4	NDUFA3	0.998	1
DPYSL4	NEK8	0.998	1
DPYSL4	NKX2-1	0.998	1
DPYSL4	ONECUT2	0.998	1
DPYSL4	PDLIM4	0.998	1
DPYSL4	PRDX5	0.998	1
DPYSL4	RALB	0.998	1
DPYSL4	RCN1	0.998	1
DPYSL4	RIN1	0.998	1
DPYSL4	RNF113B	0.998	1
DPYSL4	RNF144A	0.998	1
DPYSL4	TMEM47	0.998	1
DPYSL4	ZNHIT1	0.998	1
EGFR	PBRM1	0.998	1
EMG1	13q-Del	0.998	1
ENO1	Del_11q21	0.998	1
F2RL1	FLCN	0.998	1
F2RL1	IFNB1	0.998	1
F2RL1	KCNK1	0.998	1
F2RL1	NDUFA3	0.998	1
F2RL1	NEK8	0.998	1
F2RL1	NKX2-1	0.998	1
F2RL1	ONECUT2	0.998	1
F2RL1	PDLIM4	0.998	1
F2RL1	PRDX5	0.998	1
F2RL1	RALB	0.998	1
F2RL1	RCN1	0.998	1
F2RL1	RIN1	0.998	1
F2RL1	RNF113B	0.998	1
F2RL1	RNF144A	0.998	1
F2RL1	TMEM47	0.998	1
F2RL1	ZNHIT1	0.998	1
FAM160B2	HNRNPM	0.998	1
FAM18B2	MET	0.998	1
FAM18B2	3q-Amp	0.998	1
FAM18B2	Amp_3q26.32	0.998	1
FGFR3	KDM6A	0.998	1
FGFR3	Amp_3q26.32	0.998	1
FLCN	IFNB1	0.998	1
FLCN	KCNK1	0.998	1
FLCN	NDUFA3	0.998	1
FLCN	NEK8	0.998	1
FLCN	NKX2-1	0.998	1
FLCN	ONECUT2	0.998	1
FLCN	PDLIM4	0.998	1
FLCN	PRDX5	0.998	1
FLCN	RALB	0.998	1
FLCN	RCN1	0.998	1
FLCN	RIN1	0.998	1
FLCN	RNF113B	0.998	1
FLCN	RNF144A	0.998	1
FLCN	TMEM47	0.998	1
FLCN	ZNHIT1	0.998	1
GALNT7	SMARCB1	0.998	1
GPR50	ZFYVE26	0.998	1
IFNB1	KCNK1	0.998	1
IFNB1	NDUFA3	0.998	1
IFNB1	NEK8	0.998	1
IFNB1	NKX2-1	0.998	1
IFNB1	ONECUT2	0.998	1
IFNB1	PDLIM4	0.998	1
IFNB1	PRDX5	0.998	1
IFNB1	RALB	0.998	1
IFNB1	RCN1	0.998	1
IFNB1	RIN1	0.998	1
IFNB1	RNF113B	0.998	1
IFNB1	RNF144A	0.998	1
IFNB1	TMEM47	0.998	1
IFNB1	ZNHIT1	0.998	1
IMPA2	3q-Amp	0.998	1
INPP5E	SYNE1	0.998	1
KCNK1	NDUFA3	0.998	1
KCNK1	NEK8	0.998	1
KCNK1	NKX2-1	0.998	1
KCNK1	ONECUT2	0.998	1
KCNK1	PDLIM4	0.998	1
KCNK1	PRDX5	0.998	1
KCNK1	RALB	0.998	1
KCNK1	RCN1	0.998	1
KCNK1	RIN1	0.998	1
KCNK1	RNF113B	0.998	1
KCNK1	RNF144A	0.998	1
KCNK1	TMEM47	0.998	1
KCNK1	ZNHIT1	0.998	1
KDELR3	MUC5B	0.998	1
KDELR3	TP53	0.998	1
KDM5C	SPATA13	0.998	1
KLK10	NEFH	0.998	1
MUC5B	SLC1A7	0.998	1
NDUFA3	NEK8	0.998	1
NDUFA3	NKX2-1	0.998	1
NDUFA3	ONECUT2	0.998	1
NDUFA3	PDLIM4	0.998	1
NDUFA3	PRDX5	0.998	1
NDUFA3	RALB	0.998	1
NDUFA3	RCN1	0.998	1
NDUFA3	RIN1	0.998	1
NDUFA3	RNF113B	0.998	1
NDUFA3	RNF144A	0.998	1
NDUFA3	TMEM47	0.998	1
NDUFA3	ZNHIT1	0.998	1
NEFH	17p-Amp	0.998	1
NEK8	NKX2-1	0.998	1
NEK8	ONECUT2	0.998	1
NEK8	PDLIM4	0.998	1
NEK8	PRDX5	0.998	1
NEK8	RALB	0.998	1
NEK8	RCN1	0.998	1
NEK8	RIN1	0.998	1
NEK8	RNF113B	0.998	1
NEK8	RNF144A	0.998	1
NEK8	TMEM47	0.998	1
NEK8	ZNHIT1	0.998	1
NFE2L2	ZNF521	0.998	1
NKX2-1	ONECUT2	0.998	1
NKX2-1	PDLIM4	0.998	1
NKX2-1	PRDX5	0.998	1
NKX2-1	RALB	0.998	1
NKX2-1	RCN1	0.998	1
NKX2-1	RIN1	0.998	1
NKX2-1	RNF113B	0.998	1
NKX2-1	RNF144A	0.998	1
NKX2-1	TMEM47	0.998	1
NKX2-1	ZNHIT1	0.998	1
ONECUT2	PDLIM4	0.998	1
ONECUT2	PRDX5	0.998	1
ONECUT2	RALB	0.998	1
ONECUT2	RCN1	0.998	1
ONECUT2	RIN1	0.998	1
ONECUT2	RNF113B	0.998	1
ONECUT2	RNF144A	0.998	1
ONECUT2	TMEM47	0.998	1
ONECUT2	ZNHIT1	0.998	1
PDLIM4	PRDX5	0.998	1
PDLIM4	RALB	0.998	1
PDLIM4	RCN1	0.998	1
PDLIM4	RIN1	0.998	1
PDLIM4	RNF113B	0.998	1
PDLIM4	RNF144A	0.998	1
PDLIM4	TMEM47	0.998	1
PDLIM4	ZNHIT1	0.998	1
PRDX5	RALB	0.998	1
PRDX5	RCN1	0.998	1
PRDX5	RIN1	0.998	1
PRDX5	RNF113B	0.998	1
PRDX5	RNF144A	0.998	1
PRDX5	TMEM47	0.998	1
PRDX5	ZNHIT1	0.998	1
PTEN	10q-Del	0.998	1
PTEN	Del_2q37.3	0.998	1
RALB	RCN1	0.998	1
RALB	RIN1	0.998	1
RALB	RNF113B	0.998	1
RALB	RNF144A	0.998	1
RALB	TMEM47	0.998	1
RALB	ZNHIT1	0.998	1
RCN1	RIN1	0.998	1
RCN1	RNF113B	0.998	1
RCN1	RNF144A	0.998	1
RCN1	TMEM47	0.998	1
RCN1	ZNHIT1	0.998	1
RIMBP3	Del_19p13.3	0.998	1
RIN1	RNF113B	0.998	1
RIN1	RNF144A	0.998	1
RIN1	TMEM47	0.998	1
RIN1	ZNHIT1	0.998	1
RNF113B	RNF144A	0.998	1
RNF113B	TMEM47	0.998	1
RNF144A	TMEM47	0.998	1
RNF144A	ZNHIT1	0.998	1
SETD2	Del_3p21.2	0.998	1
SLC14A1	3q-Amp	0.998	1
SLC1A7	3q-Amp	0.998	1
SLC1A7	Del_4q34.3	0.998	1
SMARCB1	3q-Amp	0.998	1
SMARCB1	Del_4q34.3	0.998	1
SPATA13	SYNE1	0.998	1
STXBP3	12p-Amp	0.998	1
STXBP3	12q-Amp	0.998	1
TMEM47	ZNHIT1	0.998	1
TP53	Del_4q34.3	0.998	1
ZNF814	12p-Amp	0.998	1
ZNF814	12q-Amp	0.998	1
5p-Amp	Amp_Xq11.2	0.998	1
5q-Amp	Amp_Xq11.2	0.998	1
10q-Del	9q-Del	0.998	1
10q-Del	Del_19p13.3	0.998	1
17p-Del	9p-Del	0.998	1
18p-Del	21q-Del	0.998	1
18q-Del	Del_19p13.3	0.998	1
1p-Del	Del_4q34.3	0.998	1
1p-Del	Del_19p13.3	0.998	1
1q-Del	8p-Del	0.998	1
1q-Del	Del_16q23.3	0.998	1
3p-Del	Del_6q22.31	0.998	1
3q-Del	Del_11q23.1	0.998	1
6p-Del	Del_4q34.3	0.998	1
6q-Del	Del_8p23.2	0.998	1
8p-Del	Del_1q43	0.998	1
Amp_5q35.1	Del_8p23.2	0.998	1
Amp_Xp11.4	Del_9p21.3	0.998	1
Del_2q37.3	Del_9p21.3	0.998	1
Del_3p26.3	Del_6q26	0.998	1
Del_3p21.2	Del_4q34.3	0.998	1
Del_10q23.31	Del_19p13.3	0.998	1
Del_11q21	Del_13q14.2	0.998	1
ADCY8	MET	0.999	1
ARAP3	GALNT7	0.999	1
ARHGAP33	NF1	0.999	1
ARHGAP33	SMARCB1	0.999	1
ATM	SLC1A7	0.999	1
C16orf78	Amp_19p13.2	0.999	1
CDKN2A	Del_9p23	0.999	1
CSGALNACT2	NEFH	0.999	1
CSGALNACT2	STXBP3	0.999	1
CYP4F11	MUC5B	0.999	1
DPCR1	GPR50	0.999	1
ECHDC2	SMARCA4	0.999	1
EDIL3	SETD2	0.999	1
EGFR	8p-Del	0.999	1
EGFR	Del_8p23.2	0.999	1
ENO1	Del_10q23.31	0.999	1
FGFR3	PRKAG2	0.999	1
FGFR3	RAI1	0.999	1
GALNT7	KDELR3	0.999	1
GALNT7	NTRK3	0.999	1
GPR50	RAI1	0.999	1
IMPA2	2q-Amp	0.999	1
IMPA2	Amp_2q32.1	0.999	1
KDELR3	NTRK3	0.999	1
KDELR3	RAI1	0.999	1
KDELR3	RIMBP3	0.999	1
KDELR3	SMARCB1	0.999	1
KDELR3	STAM	0.999	1
KDELR3	Amp_Xp11.4	0.999	1
KDM6A	PRODH	0.999	1
MUC5B	SLC6A14	0.999	1
MUC5B	1p-Del	0.999	1
MUC5B	Del_1p36.31	0.999	1
MUC5B	Del_1q43	0.999	1
MYF6	NF1	0.999	1
NEFH	12p-Amp	0.999	1
NEFH	12q-Amp	0.999	1
NF1	PRODH	0.999	1
NF2	Del_11q23.1	0.999	1
NF2	Del_19p13.3	0.999	1
NTRK3	RAI1	0.999	1
NTRK3	SMARCB1	0.999	1
NUDT11	PTCH1	0.999	1
PHF10	2q-Amp	0.999	1
PHF10	Amp_2q32.1	0.999	1
PLXDC2	PTCH1	0.999	1
PRKAG2	Del_9p23	0.999	1
PRODH	Del_16q23.3	0.999	1
PTEN	1p-Del	0.999	1
PTEN	Del_1q43	0.999	1
PTEN	Del_16q23.3	0.999	1
RAI1	RIMBP3	0.999	1
RAI1	STAM	0.999	1
RIMBP3	STAM	0.999	1
RIMBP3	10q-Del	0.999	1
RIMBP3	Del_10q23.31	0.999	1
SCYL1	Amp_19p13.2	0.999	1
SLC14A1	2q-Amp	0.999	1
SLC14A1	3p-Amp	0.999	1
SLC14A1	Amp_2q32.1	0.999	1
SLC14A1	Amp_19p13.2	0.999	1
SLC1A7	3p-Amp	0.999	1
SMARCB1	TDG	0.999	1
SMARCB1	3p-Amp	0.999	1
STXBP3	7p-Amp	0.999	1
STXBP3	7q-Amp	0.999	1
STXBP3	Amp_3q26.32	0.999	1
STXBP3	Amp_7q31.2	0.999	1
SYNE1	9q-Del	0.999	1
SYNE1	Del_4q34.3	0.999	1
TP53	18p-Del	0.999	1
TP53	Del_19p13.3	0.999	1
VCL	Amp_2q32.1	0.999	1
ZNF521	16p-Amp	0.999	1
ZNF814	Xp-Del	0.999	1
ZNF814	Del_19p13.3	0.999	1
12q-Amp	21q-Del	0.999	1
20p-Amp	5p-Amp	0.999	1
20p-Amp	5q-Amp	0.999	1
20q-Amp	5p-Amp	0.999	1
20q-Amp	5q-Amp	0.999	1
2q-Amp	Amp_Xp22.2	0.999	1
2q-Amp	Amp_Xp11.4	0.999	1
5p-Amp	3q-Del	0.999	1
5q-Amp	3q-Del	0.999	1
13q-Del	Del_4q34.3	0.999	1
17p-Del	18p-Del	0.999	1
17p-Del	9q-Del	0.999	1
18p-Del	6p-Del	0.999	1
18p-Del	Del_4q34.3	0.999	1
18p-Del	Del_6q22.31	0.999	1
18p-Del	Del_9p21.3	0.999	1
18p-Del	Del_11q23.1	0.999	1
18q-Del	9q-Del	0.999	1
18q-Del	Del_9p23	0.999	1
18q-Del	Del_10q23.31	0.999	1
1p-Del	Del_16q23.3	0.999	1
21q-Del	9q-Del	0.999	1
21q-Del	Del_11q21	0.999	1
3p-Del	Amp_5q35.1	0.999	1
3q-Del	Del_11q21	0.999	1
6q-Del	8p-Del	0.999	1
6q-Del	Del_3p12.2	0.999	1
6q-Del	Del_9p23	0.999	1
6q-Del	Del_9p21.3	0.999	1
8p-Del	Del_13q12.13	0.999	1
9p-Del	Del_2q37.3	0.999	1
9q-Del	Del_10q23.31	0.999	1
9q-Del	Del_11q23.1	0.999	1
9q-Del	Del_13q12.13	0.999	1
9q-Del	Del_19p13.3	0.999	1
Xp-Del	Del_19p13.3	0.999	1
Amp_2q32.1	Amp_Xp22.2	0.999	1
Amp_2q32.1	Amp_Xp11.4	0.999	1
Amp_5q35.1	Del_3p14.1	0.999	1
Amp_Xp22.2	Del_9p21.3	0.999	1
Amp_Xp11.4	Amp_Xq11.2	0.999	1
Del_1p31.1	Del_19p13.3	0.999	1
Del_1q43	Del_11q23.1	0.999	1
Del_2q37.3	Del_8p23.2	0.999	1
Del_2q37.3	Del_11q21	0.999	1
Del_2q37.3	Del_16q23.3	0.999	1
Del_3p21.2	Del_6q26	0.999	1
Del_4q34.3	Del_9p21.3	0.999	1
Del_4q34.3	Del_13q12.13	0.999	1
Del_4q34.3	Del_14q31.1	0.999	1
Del_6q22.31	Del_9p23	0.999	1
Del_6q22.31	Del_9p21.3	0.999	1
Del_6q26	Del_9p23	0.999	1
Del_9p21.3	Del_11q23.1	0.999	1
Del_11q21	Del_13q12.13	0.999	1
Del_16q23.3	Del_19p13.3	0.999	1
ADCY8	ECHDC2	1	1
ADCY8	KRAS	1	1
ADCY8	NEK8	1	1
ADCY8	OR10G3	1	1
ARAP3	RIN1	1	1
ARAP3	Del_4q34.3	1	1
ARHGAP33	ATM	1	1
ARHGAP33	GALNT7	1	1
ARHGAP33	KDELR3	1	1
ARHGAP33	NTRK3	1	1
ARHGAP33	PRODH	1	1
ARHGAP33	SLC1A7	1	1
ATM	GALNT7	1	1
ATM	ONECUT2	1	1
ATM	PDLIM4	1	1
ATM	STAM	1	1
C16orf78	PBRM1	1	1
C16orf78	Amp_5q35.1	1	1
C16orf78	Del_3p21.2	1	1
C16orf78	Del_3p14.1	1	1
C16orf78	Del_3p12.2	1	1
C9orf171	RNF113B	1	1
C9orf171	ZNF814	1	1
C9orf171	ZNHIT1	1	1
CARKD	5p-Amp	1	1
CARKD	14q-Del	1	1
CARKD	3p-Del	1	1
CARKD	9p-Del	1	1
CARKD	9q-Del	1	1
CARKD	Del_2q37.3	1	1
CARKD	Del_3p26.3	1	1
CARKD	Del_3p21.2	1	1
CARKD	Del_3p12.2	1	1
CARKD	Del_9p23	1	1
CARKD	Del_9p21.3	1	1
CARKD	Del_14q31.1	1	1
CDCA8	HNRNPM	1	1
CDCA8	PHF10	1	1
CDCA8	ZNF598	1	1
CDCA8	2q-Amp	1	1
CDCA8	7p-Amp	1	1
CDCA8	7q-Amp	1	1
CDCA8	Amp_2q32.1	1	1
CDCA8	Amp_7q31.2	1	1
CDKN2A	SLC6A14	1	1
CSGALNACT2	FGFR3	1	1
CSK	ECHDC2	1	1
CXorf23	EGFR	1	1
CXorf23	ENO1	1	1
CYP4F11	IFNB1	1	1
CYP4F11	Amp_Xq11.2	1	1
DPYSL4	ENO1	1	1
DPYSL4	KDM5C	1	1
DPYSL4	SPATA13	1	1
DPYSL4	SYNE1	1	1
DPYSL4	18p-Del	1	1
DPYSL4	18q-Del	1	1
DPYSL4	Del_3p21.2	1	1
DPYSL4	Del_10q23.31	1	1
ECHDC2	NEK8	1	1
ECHDC2	RIMBP3	1	1
EDIL3	NTRK3	1	1
EDIL3	PTCH1	1	1
EMG1	1p-Del	1	1
EMG1	1q-Del	1	1
EMG1	21q-Del	1	1
EMG1	Del_1p36.31	1	1
EMG1	Del_1p31.1	1	1
EMG1	Del_1q43	1	1
ENO1	GPR50	1	1
ENO1	SPATA13	1	1
F2RL1	PIK3CA	1	1
F2RL1	SCYL1	1	1
F2RL1	SLC1A7	1	1
FAM18B2	FLCN	1	1
FAM18B2	12p-Amp	1	1
FAM18B2	12q-Amp	1	1
FAM18B2	16p-Amp	1	1
FAM18B2	16q-Amp	1	1
FAM18B2	17p-Amp	1	1
FAM18B2	17q-Amp	1	1
FAM18B2	20p-Amp	1	1
FAM18B2	20q-Amp	1	1
FAM18B2	7p-Amp	1	1
FAM18B2	7q-Amp	1	1
FAM18B2	Amp_7q31.2	1	1
FAM18B2	Amp_17q25.2	1	1
FGFR3	STAG2	1	1
FLCN	ZNF598	1	1
FLCN	7p-Amp	1	1
FLCN	7q-Amp	1	1
FLCN	18p-Del	1	1
FLCN	18q-Del	1	1
FLCN	Amp_7q31.2	1	1
FZR1	KCNK1	1	1
FZR1	MYF6	1	1
FZR1	PRKAG2	1	1
FZR1	Amp_Xq11.2	1	1
FZR1	Del_3p21.2	1	1
GALNT7	NF1	1	1
GALNT7	PRODH	1	1
GALNT7	SLC1A7	1	1
GPR50	SLC14A1	1	1
HNRNPM	PHF10	1	1
HSPA2	PTCH1	1	1
IFNB1	MUC5B	1	1
IFNB1	5p-Amp	1	1
IFNB1	5q-Amp	1	1
IFNB1	13q-Del	1	1
IFNB1	14q-Del	1	1
IFNB1	8p-Del	1	1
IFNB1	Amp_5q35.1	1	1
IFNB1	Del_3p26.3	1	1
IFNB1	Del_3p21.2	1	1
IFNB1	Del_8p23.2	1	1
IFNB1	Del_13q12.13	1	1
IFNB1	Del_13q14.2	1	1
IFNB1	Del_14q31.1	1	1
IMPA2	PIK3CA	1	1
IMPA2	5p-Amp	1	1
IMPA2	5q-Amp	1	1
IMPA2	Amp_5q35.1	1	1
INPP5E	16p-Amp	1	1
INPP5E	16q-Amp	1	1
KCNK1	PRKAG2	1	1
KCNK1	SYNE1	1	1
KCNK1	3p-Del	1	1
KCNK1	6q-Del	1	1
KCNK1	9p-Del	1	1
KCNK1	9q-Del	1	1
KCNK1	Del_3p26.3	1	1
KCNK1	Del_3p21.2	1	1
KCNK1	Del_3p14.1	1	1
KCNK1	Del_3p12.2	1	1
KCNK1	Del_6q22.31	1	1
KCNK1	Del_6q26	1	1
KCNK1	Del_9p23	1	1
KCNK1	Del_9p21.3	1	1
KDELR3	PRODH	1	1
KDELR3	SLC1A7	1	1
KIF16B	PIK3CA	1	1
KIF16B	14q-Del	1	1
KIF16B	3p-Del	1	1
KIF16B	Del_3p26.3	1	1
KIF16B	Del_3p21.2	1	1
KIF16B	Del_3p14.1	1	1
KIF16B	Del_3p12.2	1	1
KIF16B	Del_14q31.1	1	1
KLK10	ZFYVE26	1	1
MET	17p-Amp	1	1
MET	17q-Amp	1	1
MET	Amp_17q25.2	1	1
MTOR	NDUFA3	1	1
MUC5B	TP53	1	1
MUC5B	10q-Del	1	1
MUC5B	13q-Del	1	1
MUC5B	17p-Del	1	1
MUC5B	21q-Del	1	1
MUC5B	Del_1p31.1	1	1
MUC5B	Del_2q37.3	1	1
MUC5B	Del_10q23.31	1	1
MUC5B	Del_16q23.3	1	1
MYF6	RIMBP3	1	1
MYF6	Amp_Xq11.2	1	1
NDUFA3	SYNE1	1	1
NDUFA3	7q-Amp	1	1
NDUFA3	18p-Del	1	1
NDUFA3	18q-Del	1	1
NDUFA3	3p-Del	1	1
NDUFA3	9p-Del	1	1
NDUFA3	9q-Del	1	1
NDUFA3	Amp_7q31.2	1	1
NDUFA3	Del_1p36.31	1	1
NDUFA3	Del_3p26.3	1	1
NDUFA3	Del_3p21.2	1	1
NDUFA3	Del_3p14.1	1	1
NDUFA3	Del_9p23	1	1
NDUFA3	Del_9p21.3	1	1
NDUFA3	Del_13q12.13	1	1
NDUFA3	Del_13q14.2	1	1
NEK8	PBRM1	1	1
NEK8	SMARCA4	1	1
NEK8	5p-Amp	1	1
NEK8	5q-Amp	1	1
NEK8	7p-Amp	1	1
NEK8	7q-Amp	1	1
NEK8	3p-Del	1	1
NEK8	3q-Del	1	1
NEK8	Amp_5q35.1	1	1
NEK8	Amp_7q31.2	1	1
NEK8	Del_3p26.3	1	1
NEK8	Del_3p21.2	1	1
NEK8	Del_3p14.1	1	1
NEK8	Del_3p12.2	1	1
NF1	NTRK3	1	1
NF1	RALB	1	1
NF1	SLC1A7	1	1
NF2	Del_11q21	1	1
NKX2-1	ZNF598	1	1
NKX2-1	16p-Amp	1	1
NKX2-1	16q-Amp	1	1
NKX2-1	17p-Amp	1	1
NKX2-1	17q-Amp	1	1
NKX2-1	20p-Amp	1	1
NKX2-1	20q-Amp	1	1
NKX2-1	2q-Amp	1	1
NKX2-1	3p-Amp	1	1
NKX2-1	3q-Amp	1	1
NKX2-1	7p-Amp	1	1
NKX2-1	7q-Amp	1	1
NKX2-1	Amp_2q32.1	1	1
NKX2-1	Amp_3q26.32	1	1
NKX2-1	Amp_7q31.2	1	1
NKX2-1	Amp_17q25.2	1	1
NTRK3	PRODH	1	1
NTRK3	SLC1A7	1	1
ONECUT2	5p-Amp	1	1
ONECUT2	5q-Amp	1	1
ONECUT2	3p-Del	1	1
ONECUT2	3q-Del	1	1
ONECUT2	Amp_5q35.1	1	1
ONECUT2	Del_3p26.3	1	1
ONECUT2	Del_3p21.2	1	1
ONECUT2	Del_3p14.1	1	1
ONECUT2	Del_3p12.2	1	1
OR10G3	PBRM1	1	1
OR10G3	VHL	1	1
PBRM1	PDLIM4	1	1
PBRM1	RNF144A	1	1
PBRM1	SETD2	1	1
PBRM1	VHL	1	1
PBRM1	3p-Del	1	1
PBRM1	Del_3p26.3	1	1
PBRM1	Del_3p21.2	1	1
PBRM1	Del_3p14.1	1	1
PBRM1	Del_3p12.2	1	1
PDLIM4	VHL	1	1
PDLIM4	5p-Amp	1	1
PDLIM4	5q-Amp	1	1
PDLIM4	3p-Del	1	1
PDLIM4	3q-Del	1	1
PDLIM4	8p-Del	1	1
PDLIM4	Amp_5q35.1	1	1
PDLIM4	Del_3p26.3	1	1
PDLIM4	Del_3p21.2	1	1
PDLIM4	Del_3p14.1	1	1
PDLIM4	Del_3p12.2	1	1
PDLIM4	Del_8p23.2	1	1
PHF10	ZNF598	1	1
PIK3CA	SCYL1	1	1
PIK3CA	SLC1A7	1	1
PIK3CA	SPATA13	1	1
PLXDC2	SLC6A14	1	1
PLXDC2	Amp_19p13.2	1	1
PRDX5	SMARCA4	1	1
PRDX5	VHL	1	1
PRDX5	3p-Del	1	1
PRDX5	3q-Del	1	1
PRDX5	Del_3p26.3	1	1
PRDX5	Del_3p21.2	1	1
PRDX5	Del_3p14.1	1	1
PRDX5	Del_3p12.2	1	1
PRKAG2	SCYL1	1	1
PRKAG2	9p-Del	1	1
PRKAG2	Del_9p21.3	1	1
PRODH	SLC1A7	1	1
PRODH	SMARCB1	1	1
PTEN	RALB	1	1
PTEN	1q-Del	1	1
RALB	8p-Del	1	1
RALB	Del_3p26.3	1	1
RALB	Del_3p21.2	1	1
RALB	Del_8p23.2	1	1
RCN1	7p-Amp	1	1
RCN1	7q-Amp	1	1
RCN1	10q-Del	1	1
RCN1	1p-Del	1	1
RCN1	1q-Del	1	1
RCN1	21q-Del	1	1
RCN1	9p-Del	1	1
RCN1	9q-Del	1	1
RCN1	Amp_7q31.2	1	1
RCN1	Del_1p36.31	1	1
RCN1	Del_1p31.1	1	1
RCN1	Del_1q43	1	1
RCN1	Del_9p23	1	1
RCN1	Del_9p21.3	1	1
RCN1	Del_10q23.31	1	1
RIN1	3p-Del	1	1
RIN1	8p-Del	1	1
RIN1	Del_2q37.3	1	1
RIN1	Del_3p26.3	1	1
RIN1	Del_3p21.2	1	1
RIN1	Del_3p14.1	1	1
RIN1	Del_3p12.2	1	1
RIN1	Del_4q34.3	1	1
RIN1	Del_8p23.2	1	1
RNF113B	ZNHIT1	1	1
RNF144A	SETD2	1	1
RNF144A	VHL	1	1
RNF144A	10q-Del	1	1
RNF144A	14q-Del	1	1
RNF144A	Del_3p26.3	1	1
RNF144A	Del_3p21.2	1	1
RNF144A	Del_10q23.31	1	1
RNF144A	Del_14q31.1	1	1
SCYL1	SLC1A7	1	1
SETD2	Del_19p13.3	1	1
SLC14A1	TDG	1	1
SLC14A1	12p-Amp	1	1
SLC14A1	12q-Amp	1	1
SLC14A1	16p-Amp	1	1
SLC14A1	16q-Amp	1	1
SLC14A1	17p-Amp	1	1
SLC14A1	17q-Amp	1	1
SLC14A1	20p-Amp	1	1
SLC14A1	20q-Amp	1	1
SLC14A1	7p-Amp	1	1
SLC14A1	7q-Amp	1	1
SLC14A1	Amp_7q31.2	1	1
SLC14A1	Amp_17q25.2	1	1
SLC1A7	SMARCB1	1	1
SLC1A7	Del_16q23.3	1	1
SPATA13	ZNF598	1	1
SPATA13	Del_16q23.3	1	1
STXBP3	16p-Amp	1	1
STXBP3	3p-Amp	1	1
STXBP3	3q-Amp	1	1
SYNE1	TP53	1	1
TDG	12p-Amp	1	1
TDG	12q-Amp	1	1
TDG	17p-Amp	1	1
TDG	17q-Amp	1	1
TDG	Amp_17q25.2	1	1
TDG	Amp_19p13.2	1	1
TMEM47	3p-Del	1	1
TMEM47	3q-Del	1	1
TMEM47	Del_3p26.3	1	1
TMEM47	Del_3p21.2	1	1
TMEM47	Del_3p14.1	1	1
TP53	10q-Del	1	1
TP53	13q-Del	1	1
TP53	17p-Del	1	1
TP53	1p-Del	1	1
TP53	1q-Del	1	1
TP53	21q-Del	1	1
TP53	6p-Del	1	1
TP53	6q-Del	1	1
TP53	Del_1p36.31	1	1
TP53	Del_1p31.1	1	1
TP53	Del_1q43	1	1
TP53	Del_2q37.3	1	1
TP53	Del_6q22.31	1	1
TP53	Del_6q26	1	1
TP53	Del_10q23.31	1	1
TP53	Del_13q12.13	1	1
TP53	Del_13q14.2	1	1
TP53	Del_16q23.3	1	1
VCL	3p-Del	1	1
VCL	Del_3p26.3	1	1
VCL	Del_3p21.2	1	1
VHL	3p-Del	1	1
VHL	Amp_5q35.1	1	1
VHL	Del_3p26.3	1	1
VHL	Del_3p21.2	1	1
VHL	Del_3p14.1	1	1
VHL	Del_3p12.2	1	1
ZNF521	ZNF532	1	1
12p-Amp	12q-Amp	1	1
12p-Amp	16p-Amp	1	1
12p-Amp	16q-Amp	1	1
12p-Amp	17p-Amp	1	1
12p-Amp	17q-Amp	1	1
12p-Amp	20p-Amp	1	1
12p-Amp	20q-Amp	1	1
12p-Amp	2q-Amp	1	1
12p-Amp	3p-Amp	1	1
12p-Amp	3q-Amp	1	1
12p-Amp	7p-Amp	1	1
12p-Amp	7q-Amp	1	1
12p-Amp	21q-Del	1	1
12p-Amp	Amp_2q32.1	1	1
12p-Amp	Amp_3q26.32	1	1
12p-Amp	Amp_7q31.2	1	1
12p-Amp	Amp_17q25.2	1	1
12p-Amp	Amp_19p13.2	1	1
12q-Amp	16p-Amp	1	1
12q-Amp	16q-Amp	1	1
12q-Amp	17p-Amp	1	1
12q-Amp	17q-Amp	1	1
12q-Amp	20p-Amp	1	1
12q-Amp	20q-Amp	1	1
12q-Amp	2q-Amp	1	1
12q-Amp	3p-Amp	1	1
12q-Amp	3q-Amp	1	1
12q-Amp	7p-Amp	1	1
12q-Amp	7q-Amp	1	1
12q-Amp	Amp_2q32.1	1	1
12q-Amp	Amp_3q26.32	1	1
12q-Amp	Amp_7q31.2	1	1
12q-Amp	Amp_17q25.2	1	1
12q-Amp	Amp_19p13.2	1	1
16p-Amp	16q-Amp	1	1
16p-Amp	17p-Amp	1	1
16p-Amp	17q-Amp	1	1
16p-Amp	20p-Amp	1	1
16p-Amp	20q-Amp	1	1
16p-Amp	2q-Amp	1	1
16p-Amp	3p-Amp	1	1
16p-Amp	3q-Amp	1	1
16p-Amp	7p-Amp	1	1
16p-Amp	7q-Amp	1	1
16p-Amp	Amp_2q32.1	1	1
16p-Amp	Amp_3q26.32	1	1
16p-Amp	Amp_7q31.2	1	1
16p-Amp	Amp_17q25.2	1	1
16p-Amp	Amp_19p13.2	1	1
16q-Amp	17p-Amp	1	1
16q-Amp	17q-Amp	1	1
16q-Amp	20p-Amp	1	1
16q-Amp	20q-Amp	1	1
16q-Amp	2q-Amp	1	1
16q-Amp	3p-Amp	1	1
16q-Amp	3q-Amp	1	1
16q-Amp	7p-Amp	1	1
16q-Amp	7q-Amp	1	1
16q-Amp	Amp_2q32.1	1	1
16q-Amp	Amp_3q26.32	1	1
16q-Amp	Amp_7q31.2	1	1
16q-Amp	Amp_17q25.2	1	1
16q-Amp	Amp_19p13.2	1	1
17p-Amp	17q-Amp	1	1
17p-Amp	20p-Amp	1	1
17p-Amp	20q-Amp	1	1
17p-Amp	2q-Amp	1	1
17p-Amp	3p-Amp	1	1
17p-Amp	3q-Amp	1	1
17p-Amp	7p-Amp	1	1
17p-Amp	7q-Amp	1	1
17p-Amp	Amp_2q32.1	1	1
17p-Amp	Amp_3q26.32	1	1
17p-Amp	Amp_7q31.2	1	1
17p-Amp	Amp_17q25.2	1	1
17p-Amp	Amp_19p13.2	1	1
17q-Amp	20p-Amp	1	1
17q-Amp	20q-Amp	1	1
17q-Amp	2q-Amp	1	1
17q-Amp	3p-Amp	1	1
17q-Amp	3q-Amp	1	1
17q-Amp	7p-Amp	1	1
17q-Amp	7q-Amp	1	1
17q-Amp	Amp_2q32.1	1	1
17q-Amp	Amp_3q26.32	1	1
17q-Amp	Amp_7q31.2	1	1
17q-Amp	Amp_17q25.2	1	1
17q-Amp	Amp_19p13.2	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	2q-Amp	1	1
20p-Amp	3p-Amp	1	1
20p-Amp	3q-Amp	1	1
20p-Amp	7p-Amp	1	1
20p-Amp	7q-Amp	1	1
20p-Amp	Amp_2q32.1	1	1
20p-Amp	Amp_3q26.32	1	1
20p-Amp	Amp_7q31.2	1	1
20p-Amp	Amp_17q25.2	1	1
20p-Amp	Amp_19p13.2	1	1
20q-Amp	2q-Amp	1	1
20q-Amp	3p-Amp	1	1
20q-Amp	3q-Amp	1	1
20q-Amp	7p-Amp	1	1
20q-Amp	7q-Amp	1	1
20q-Amp	Amp_2q32.1	1	1
20q-Amp	Amp_3q26.32	1	1
20q-Amp	Amp_7q31.2	1	1
20q-Amp	Amp_17q25.2	1	1
20q-Amp	Amp_19p13.2	1	1
2q-Amp	3p-Amp	1	1
2q-Amp	3q-Amp	1	1
2q-Amp	7p-Amp	1	1
2q-Amp	7q-Amp	1	1
2q-Amp	Amp_2q32.1	1	1
2q-Amp	Amp_3q26.32	1	1
2q-Amp	Amp_7q31.2	1	1
2q-Amp	Amp_17q25.2	1	1
3p-Amp	3q-Amp	1	1
3p-Amp	7p-Amp	1	1
3p-Amp	7q-Amp	1	1
3p-Amp	Amp_2q32.1	1	1
3p-Amp	Amp_3q26.32	1	1
3p-Amp	Amp_7q31.2	1	1
3p-Amp	Amp_17q25.2	1	1
3p-Amp	Amp_19p13.2	1	1
3q-Amp	7p-Amp	1	1
3q-Amp	7q-Amp	1	1
3q-Amp	Amp_2q32.1	1	1
3q-Amp	Amp_3q26.32	1	1
3q-Amp	Amp_7q31.2	1	1
3q-Amp	Amp_17q25.2	1	1
3q-Amp	Amp_19p13.2	1	1
5p-Amp	5q-Amp	1	1
5p-Amp	Amp_5q35.1	1	1
5p-Amp	Del_8p23.2	1	1
5q-Amp	Amp_5q35.1	1	1
5q-Amp	Del_8p23.2	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_2q32.1	1	1
7p-Amp	Amp_3q26.32	1	1
7p-Amp	Amp_7q31.2	1	1
7p-Amp	Amp_17q25.2	1	1
7p-Amp	Amp_19p13.2	1	1
7q-Amp	Amp_2q32.1	1	1
7q-Amp	Amp_3q26.32	1	1
7q-Amp	Amp_7q31.2	1	1
7q-Amp	Amp_17q25.2	1	1
7q-Amp	Amp_19p13.2	1	1
10q-Del	13q-Del	1	1
10q-Del	17p-Del	1	1
10q-Del	1p-Del	1	1
10q-Del	1q-Del	1	1
10q-Del	21q-Del	1	1
10q-Del	3q-Del	1	1
10q-Del	6p-Del	1	1
10q-Del	6q-Del	1	1
10q-Del	8p-Del	1	1
10q-Del	Del_1p36.31	1	1
10q-Del	Del_1p31.1	1	1
10q-Del	Del_1q43	1	1
10q-Del	Del_2q37.3	1	1
10q-Del	Del_6q22.31	1	1
10q-Del	Del_6q26	1	1
10q-Del	Del_8p23.2	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_11q21	1	1
10q-Del	Del_11q23.1	1	1
10q-Del	Del_13q12.13	1	1
10q-Del	Del_13q14.2	1	1
10q-Del	Del_16q23.3	1	1
13q-Del	17p-Del	1	1
13q-Del	18p-Del	1	1
13q-Del	18q-Del	1	1
13q-Del	1p-Del	1	1
13q-Del	1q-Del	1	1
13q-Del	21q-Del	1	1
13q-Del	6p-Del	1	1
13q-Del	6q-Del	1	1
13q-Del	8p-Del	1	1
13q-Del	9q-Del	1	1
13q-Del	Del_1p36.31	1	1
13q-Del	Del_1p31.1	1	1
13q-Del	Del_1q43	1	1
13q-Del	Del_2q37.3	1	1
13q-Del	Del_6q22.31	1	1
13q-Del	Del_6q26	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_10q23.31	1	1
13q-Del	Del_13q12.13	1	1
13q-Del	Del_13q14.2	1	1
13q-Del	Del_16q23.3	1	1
14q-Del	3p-Del	1	1
14q-Del	9p-Del	1	1
14q-Del	9q-Del	1	1
14q-Del	Del_1p36.31	1	1
14q-Del	Del_3p26.3	1	1
14q-Del	Del_3p21.2	1	1
14q-Del	Del_3p14.1	1	1
14q-Del	Del_3p12.2	1	1
14q-Del	Del_4q34.3	1	1
14q-Del	Del_8p23.2	1	1
14q-Del	Del_9p23	1	1
14q-Del	Del_9p21.3	1	1
14q-Del	Del_14q31.1	1	1
17p-Del	18q-Del	1	1
17p-Del	1p-Del	1	1
17p-Del	1q-Del	1	1
17p-Del	21q-Del	1	1
17p-Del	6p-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	Del_1p36.31	1	1
17p-Del	Del_1p31.1	1	1
17p-Del	Del_1q43	1	1
17p-Del	Del_2q37.3	1	1
17p-Del	Del_6q22.31	1	1
17p-Del	Del_6q26	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_11q21	1	1
17p-Del	Del_11q23.1	1	1
17p-Del	Del_13q12.13	1	1
17p-Del	Del_13q14.2	1	1
17p-Del	Del_16q23.3	1	1
18p-Del	18q-Del	1	1
18p-Del	1p-Del	1	1
18p-Del	6q-Del	1	1
18p-Del	Del_1p36.31	1	1
18p-Del	Del_1p31.1	1	1
18p-Del	Del_2q37.3	1	1
18p-Del	Del_6q26	1	1
18p-Del	Del_11q21	1	1
18p-Del	Del_13q12.13	1	1
18p-Del	Del_13q14.2	1	1
18q-Del	1p-Del	1	1
18q-Del	6p-Del	1	1
18q-Del	6q-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	Del_1p36.31	1	1
18q-Del	Del_1p31.1	1	1
18q-Del	Del_2q37.3	1	1
18q-Del	Del_6q22.31	1	1
18q-Del	Del_6q26	1	1
18q-Del	Del_9p21.3	1	1
18q-Del	Del_11q21	1	1
18q-Del	Del_11q23.1	1	1
18q-Del	Del_13q12.13	1	1
18q-Del	Del_13q14.2	1	1
1p-Del	1q-Del	1	1
1p-Del	21q-Del	1	1
1p-Del	6p-Del	1	1
1p-Del	6q-Del	1	1
1p-Del	8p-Del	1	1
1p-Del	Del_1p36.31	1	1
1p-Del	Del_1p31.1	1	1
1p-Del	Del_1q43	1	1
1p-Del	Del_2q37.3	1	1
1p-Del	Del_6q22.31	1	1
1p-Del	Del_6q26	1	1
1p-Del	Del_8p23.2	1	1
1p-Del	Del_10q23.31	1	1
1p-Del	Del_11q21	1	1
1p-Del	Del_11q23.1	1	1
1p-Del	Del_13q12.13	1	1
1p-Del	Del_13q14.2	1	1
1q-Del	21q-Del	1	1
1q-Del	6p-Del	1	1
1q-Del	6q-Del	1	1
1q-Del	Del_1p36.31	1	1
1q-Del	Del_1p31.1	1	1
1q-Del	Del_1q43	1	1
1q-Del	Del_2q37.3	1	1
1q-Del	Del_6q22.31	1	1
1q-Del	Del_6q26	1	1
1q-Del	Del_10q23.31	1	1
1q-Del	Del_11q21	1	1
1q-Del	Del_11q23.1	1	1
1q-Del	Del_13q12.13	1	1
1q-Del	Del_13q14.2	1	1
21q-Del	6p-Del	1	1
21q-Del	6q-Del	1	1
21q-Del	Xp-Del	1	1
21q-Del	Del_1p36.31	1	1
21q-Del	Del_1p31.1	1	1
21q-Del	Del_1q43	1	1
21q-Del	Del_2q37.3	1	1
21q-Del	Del_6q22.31	1	1
21q-Del	Del_6q26	1	1
21q-Del	Del_10q23.31	1	1
21q-Del	Del_11q23.1	1	1
21q-Del	Del_13q12.13	1	1
21q-Del	Del_13q14.2	1	1
21q-Del	Del_16q23.3	1	1
3p-Del	3q-Del	1	1
3p-Del	8p-Del	1	1
3p-Del	9p-Del	1	1
3p-Del	9q-Del	1	1
3p-Del	Del_3p26.3	1	1
3p-Del	Del_3p21.2	1	1
3p-Del	Del_3p14.1	1	1
3p-Del	Del_3p12.2	1	1
3p-Del	Del_6q26	1	1
3p-Del	Del_8p23.2	1	1
3p-Del	Del_9p23	1	1
3p-Del	Del_9p21.3	1	1
3p-Del	Del_14q31.1	1	1
3q-Del	6p-Del	1	1
3q-Del	6q-Del	1	1
3q-Del	Del_3p26.3	1	1
3q-Del	Del_3p21.2	1	1
3q-Del	Del_3p14.1	1	1
3q-Del	Del_3p12.2	1	1
3q-Del	Del_6q22.31	1	1
3q-Del	Del_6q26	1	1
3q-Del	Del_10q23.31	1	1
6p-Del	6q-Del	1	1
6p-Del	8p-Del	1	1
6p-Del	9p-Del	1	1
6p-Del	9q-Del	1	1
6p-Del	Del_1p36.31	1	1
6p-Del	Del_1p31.1	1	1
6p-Del	Del_1q43	1	1
6p-Del	Del_2q37.3	1	1
6p-Del	Del_6q22.31	1	1
6p-Del	Del_6q26	1	1
6p-Del	Del_8p23.2	1	1
6p-Del	Del_9p23	1	1
6p-Del	Del_9p21.3	1	1
6p-Del	Del_10q23.31	1	1
6p-Del	Del_11q21	1	1
6p-Del	Del_11q23.1	1	1
6p-Del	Del_13q12.13	1	1
6p-Del	Del_13q14.2	1	1
6p-Del	Del_16q23.3	1	1
6q-Del	9p-Del	1	1
6q-Del	9q-Del	1	1
6q-Del	Del_1p36.31	1	1
6q-Del	Del_1p31.1	1	1
6q-Del	Del_1q43	1	1
6q-Del	Del_2q37.3	1	1
6q-Del	Del_6q22.31	1	1
6q-Del	Del_6q26	1	1
6q-Del	Del_10q23.31	1	1
6q-Del	Del_11q21	1	1
6q-Del	Del_11q23.1	1	1
6q-Del	Del_13q12.13	1	1
6q-Del	Del_13q14.2	1	1
6q-Del	Del_16q23.3	1	1
8p-Del	Del_1p36.31	1	1
8p-Del	Del_1p31.1	1	1
8p-Del	Del_2q37.3	1	1
8p-Del	Del_3p26.3	1	1
8p-Del	Del_3p21.2	1	1
8p-Del	Del_3p14.1	1	1
8p-Del	Del_3p12.2	1	1
8p-Del	Del_6q22.31	1	1
8p-Del	Del_6q26	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_13q14.2	1	1
9p-Del	9q-Del	1	1
9p-Del	Del_1p36.31	1	1
9p-Del	Del_3p26.3	1	1
9p-Del	Del_3p21.2	1	1
9p-Del	Del_3p14.1	1	1
9p-Del	Del_3p12.2	1	1
9p-Del	Del_4q34.3	1	1
9p-Del	Del_6q22.31	1	1
9p-Del	Del_6q26	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_14q31.1	1	1
9q-Del	Del_1p36.31	1	1
9q-Del	Del_1p31.1	1	1
9q-Del	Del_2q37.3	1	1
9q-Del	Del_3p26.3	1	1
9q-Del	Del_3p21.2	1	1
9q-Del	Del_3p14.1	1	1
9q-Del	Del_3p12.2	1	1
9q-Del	Del_4q34.3	1	1
9q-Del	Del_6q22.31	1	1
9q-Del	Del_6q26	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_13q14.2	1	1
9q-Del	Del_14q31.1	1	1
9q-Del	Del_16q23.3	1	1
Amp_2q32.1	Amp_3q26.32	1	1
Amp_2q32.1	Amp_7q31.2	1	1
Amp_2q32.1	Amp_17q25.2	1	1
Amp_3q26.32	Amp_7q31.2	1	1
Amp_3q26.32	Amp_17q25.2	1	1
Amp_3q26.32	Amp_19p13.2	1	1
Amp_5q35.1	Del_3p26.3	1	1
Amp_5q35.1	Del_3p21.2	1	1
Amp_7q31.2	Amp_17q25.2	1	1
Amp_7q31.2	Amp_19p13.2	1	1
Amp_17q25.2	Amp_19p13.2	1	1
Amp_Xp22.2	Amp_Xp11.4	1	1
Amp_Xp22.2	Amp_Xq11.2	1	1
Del_1p36.31	Del_1p31.1	1	1
Del_1p36.31	Del_1q43	1	1
Del_1p36.31	Del_2q37.3	1	1
Del_1p36.31	Del_4q34.3	1	1
Del_1p36.31	Del_6q22.31	1	1
Del_1p36.31	Del_6q26	1	1
Del_1p36.31	Del_8p23.2	1	1
Del_1p36.31	Del_9p23	1	1
Del_1p36.31	Del_9p21.3	1	1
Del_1p36.31	Del_10q23.31	1	1
Del_1p36.31	Del_11q21	1	1
Del_1p36.31	Del_11q23.1	1	1
Del_1p36.31	Del_13q12.13	1	1
Del_1p36.31	Del_13q14.2	1	1
Del_1p36.31	Del_14q31.1	1	1
Del_1p36.31	Del_19p13.3	1	1
Del_1p31.1	Del_1q43	1	1
Del_1p31.1	Del_2q37.3	1	1
Del_1p31.1	Del_4q34.3	1	1
Del_1p31.1	Del_6q22.31	1	1
Del_1p31.1	Del_6q26	1	1
Del_1p31.1	Del_8p23.2	1	1
Del_1p31.1	Del_10q23.31	1	1
Del_1p31.1	Del_11q21	1	1
Del_1p31.1	Del_11q23.1	1	1
Del_1p31.1	Del_13q12.13	1	1
Del_1p31.1	Del_13q14.2	1	1
Del_1q43	Del_2q37.3	1	1
Del_1q43	Del_6q22.31	1	1
Del_1q43	Del_6q26	1	1
Del_1q43	Del_10q23.31	1	1
Del_1q43	Del_11q21	1	1
Del_1q43	Del_13q12.13	1	1
Del_1q43	Del_13q14.2	1	1
Del_2q37.3	Del_6q22.31	1	1
Del_2q37.3	Del_6q26	1	1
Del_2q37.3	Del_10q23.31	1	1
Del_2q37.3	Del_11q23.1	1	1
Del_2q37.3	Del_13q12.13	1	1
Del_2q37.3	Del_13q14.2	1	1
Del_3p26.3	Del_3p21.2	1	1
Del_3p26.3	Del_3p14.1	1	1
Del_3p26.3	Del_3p12.2	1	1
Del_3p26.3	Del_8p23.2	1	1
Del_3p26.3	Del_9p23	1	1
Del_3p26.3	Del_9p21.3	1	1
Del_3p26.3	Del_14q31.1	1	1
Del_3p21.2	Del_3p14.1	1	1
Del_3p21.2	Del_3p12.2	1	1
Del_3p21.2	Del_8p23.2	1	1
Del_3p21.2	Del_9p23	1	1
Del_3p21.2	Del_9p21.3	1	1
Del_3p21.2	Del_14q31.1	1	1
Del_3p14.1	Del_3p12.2	1	1
Del_3p14.1	Del_4q34.3	1	1
Del_3p14.1	Del_6q22.31	1	1
Del_3p14.1	Del_6q26	1	1
Del_3p14.1	Del_8p23.2	1	1
Del_3p14.1	Del_9p23	1	1
Del_3p14.1	Del_9p21.3	1	1
Del_3p14.1	Del_14q31.1	1	1
Del_3p12.2	Del_4q34.3	1	1
Del_3p12.2	Del_6q22.31	1	1
Del_3p12.2	Del_6q26	1	1
Del_3p12.2	Del_8p23.2	1	1
Del_3p12.2	Del_9p23	1	1
Del_3p12.2	Del_9p21.3	1	1
Del_3p12.2	Del_14q31.1	1	1
Del_4q34.3	Del_9p23	1	1
Del_4q34.3	Del_13q14.2	1	1
Del_4q34.3	Del_16q23.3	1	1
Del_4q34.3	Del_19p13.3	1	1
Del_6q22.31	Del_6q26	1	1
Del_6q22.31	Del_8p23.2	1	1
Del_6q22.31	Del_10q23.31	1	1
Del_6q22.31	Del_11q21	1	1
Del_6q22.31	Del_11q23.1	1	1
Del_6q22.31	Del_13q12.13	1	1
Del_6q22.31	Del_13q14.2	1	1
Del_6q22.31	Del_16q23.3	1	1
Del_6q26	Del_8p23.2	1	1
Del_6q26	Del_9p21.3	1	1
Del_6q26	Del_10q23.31	1	1
Del_6q26	Del_11q21	1	1
Del_6q26	Del_11q23.1	1	1
Del_6q26	Del_13q12.13	1	1
Del_6q26	Del_13q14.2	1	1
Del_6q26	Del_16q23.3	1	1
Del_8p23.2	Del_10q23.31	1	1
Del_8p23.2	Del_13q12.13	1	1
Del_8p23.2	Del_13q14.2	1	1
Del_8p23.2	Del_14q31.1	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_14q31.1	1	1
Del_9p21.3	Del_14q31.1	1	1
Del_10q23.31	Del_11q21	1	1
Del_10q23.31	Del_11q23.1	1	1
Del_10q23.31	Del_13q12.13	1	1
Del_10q23.31	Del_13q14.2	1	1
Del_10q23.31	Del_16q23.3	1	1
Del_11q21	Del_11q23.1	1	1
Del_11q21	Del_16q23.3	1	1
Del_11q21	Del_19p13.3	1	1
Del_11q23.1	Del_19p13.3	1	1
Del_13q12.13	Del_13q14.2	1	1
Del_13q12.13	Del_16q23.3	1	1
Del_13q14.2	Del_16q23.3	1	1
17p-Amp	Del_3p26.3	1.01e-11	1
1q-Del	Del_3p26.3	1.14e-08	1
VHL	13q-Del	1.17e-05	1
12q-Amp	Del_3p21.2	1.1e-05	1
16q-Amp	Del_3p14.1	1.25e-05	1
17p-Amp	Del_6q26	1.43e-05	1
12p-Amp	Del_3p26.3	1.49e-06	1
FAM18B2	Del_3p21.2	1.52e-06	1
17p-Amp	3p-Del	1.55e-09	1
PBRM1	17p-Amp	1.64e-07	1
VHL	Amp_17q25.2	1.64e-11	1
Del_1q43	Del_3p26.3	1.75e-05	1
12p-Amp	Del_3p21.2	1.78e-05	1
17q-Amp	Del_1p31.1	1.81e-05	1
VHL	Amp_7q31.2	1.83e-08	1
VHL	17p-Amp	1.87e-09	1
7p-Amp	Del_3p26.3	2.05e-06	1
VHL	1q-Del	2.05e-09	1
PBRM1	17p-Del	2.14e-07	1
3p-Amp	Del_3p21.2	2.18e-05	1
20p-Amp	Del_3p26.3	2.23e-06	1
20q-Amp	Del_3p26.3	2.23e-06	1
VHL	12q-Amp	2.38e-07	1
17q-Amp	Del_3p12.2	2.3e-06	1
Amp_19p13.2	Del_3p26.3	2.42e-05	1
PBRM1	Amp_17q25.2	2.42e-06	1
16q-Amp	Del_3p26.3	2.48e-06	1
17p-Amp	Del_3p14.1	2.49e-10	1
17p-Amp	Del_6q22.31	2.59e-05	1
VHL	1p-Del	2.6e-05	1
PBRM1	1q-Del	2.89e-05	1
VHL	7p-Amp	2.94e-07	1
FAM18B2	VHL	2.96e-06	1
17q-Amp	3p-Del	2.99e-09	1
1q-Del	Del_3p21.2	3.34e-07	1
FAM18B2	Del_3p26.3	3.38e-06	1
20p-Amp	Del_3p21.2	3.5e-05	1
20q-Amp	Del_3p21.2	3.5e-05	1
VHL	16p-Amp	3.65e-08	1
17p-Del	Del_3p26.3	3.71e-05	1
7p-Amp	Del_3p21.2	3.78e-05	1
3p-Amp	Del_3p26.3	3.81e-05	1
16q-Amp	Del_3p21.2	4.16e-06	1
VHL	17p-Del	4.17e-08	1
Amp_17q25.2	Del_3p26.3	4.31e-11	1
VHL	7q-Amp	4.75e-08	1
7q-Amp	Del_3p26.3	4.85e-06	1
17p-Amp	Del_3p21.2	4.92e-14	1
PBRM1	17q-Amp	4.99e-06	1
PBRM1	16q-Amp	5.02e-05	1
TP53	VHL	5.02e-05	1
17q-Amp	Del_3p26.3	5.05e-12	1
VHL	Del_1p36.31	5.39e-06	1
1q-Del	3p-Del	5.81e-05	1
Amp_7q31.2	Del_3p26.3	5.97e-06	1
VHL	16q-Amp	5.98e-08	1
12q-Amp	Del_3p26.3	6.57e-07	1
17p-Amp	Del_1p31.1	6.63e-05	1
Amp_17q25.2	Del_3p12.2	6.75e-06	1
17q-Amp	Del_3p14.1	6.85e-09	1
Amp_17q25.2	Del_3p21.2	6.91e-12	1
7q-Amp	Del_3p21.2	7.55e-05	1
17p-Amp	Del_3p12.2	7.57e-08	1
VHL	6p-Del	7.84e-05	1
VHL	12p-Amp	7.92e-08	1
VHL	Del_2q37.3	8.1e-05	1
Amp_7q31.2	Del_3p21.2	8.31e-05	1
VHL	Del_1q43	8.56e-08	1
VHL	17q-Amp	8.68e-11	1
3p-Amp	3p-Del	8e-04	1
21q-Del	Del_3p26.3	9.13e-05	1
Amp_17q25.2	Del_3p14.1	9.15e-08	1
PBRM1	Amp_7q31.2	9.25e-05	1
17q-Amp	Del_3p21.2	9.26e-13	1
17q-Amp	Del_6q22.31	9.29e-05	1
3p-Del	Amp_17q25.2	9.41e-10	1
1q-Del	Del_3p14.1	9.64e-05	1
