name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-B7-5816-01A-21D-1600-08	1522	1507	15	1164	9.855453e-03	coding only	1	28835288	...	343	1022	1522	1.189515e-05	3.544268e-05	5.278255e-05	-4.277510e+00	...	142	28779098	...	4.934137e-06
TCGA-B7-5818-01A-11D-1600-08	461	454	7	346	1.518438e-02	coding only	1	28835288	...	107	331	460	3.710731e-06	1.147899e-05	1.595268e-05	-4.797166e+00	...	15	28779098	...	5.212116e-07
TCGA-BR-4183-01A-02D-1126-08	68	68	0	50	0	coding only	1	28835288	...	18	48	68	6.242351e-07	1.664627e-06	2.358222e-06	-5.627415e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-4184-01A-01D-1126-08	4577	4535	42	3317	9.176316e-03	coding only	1	28835288	...	1218	3025	4577	4.223991e-05	1.049062e-04	1.587291e-04	-3.799343e+00	...	292	28779098	...	1.014625e-05
TCGA-BR-4187-01A-01D-1126-08	36	36	0	26	0	coding only	1	28835288	...	10	25	36	3.467973e-07	8.669932e-07	1.248470e-06	-5.903622e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-4188-01A-01D-1126-08	84	83	1	64	1.190476e-02	coding only	1	28835288	...	19	62	84	6.589149e-07	2.150143e-06	2.913097e-06	-5.535645e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-4191-01A-02D-1126-08	222	219	3	176	1.351351e-02	coding only	1	28835288	...	43	159	222	1.491228e-06	5.514077e-06	7.698900e-06	-5.113571e+00	...	17	28779098	...	5.907065e-07
TCGA-BR-4201-01A-01D-1126-08	1627	1605	22	1210	1.352182e-02	coding only	1	28835288	...	395	936	1627	1.369849e-05	3.246023e-05	5.642392e-05	-4.248537e+00	...	274	28779098	...	9.520799e-06
TCGA-BR-4253-01A-01D-1126-08	99	98	1	75	1.010101e-02	coding only	1	28835288	...	23	71	99	7.976338e-07	2.462261e-06	3.433293e-06	-5.464289e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-4255-01A-01D-1126-08	69	68	1	44	1.449275e-02	coding only	1	28835288	...	24	41	69	8.323135e-07	1.421869e-06	2.392901e-06	-5.621075e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-4256-01A-01D-1126-08	1160	1150	10	852	8.620690e-03	coding only	1	28835288	...	298	713	1160	1.033456e-05	2.472665e-05	4.022849e-05	-4.395466e+00	...	138	28779098	...	4.795147e-06
TCGA-BR-4257-01A-01D-1126-08	1256	1245	11	896	8.757962e-03	coding only	1	28835288	...	349	734	1256	1.210323e-05	2.545492e-05	4.355774e-05	-4.360935e+00	...	162	28779098	...	5.629085e-06
TCGA-BR-4267-01A-01D-1126-08	103	102	1	78	9.708738e-03	coding only	1	28835288	...	24	75	103	8.323135e-07	2.600980e-06	3.572012e-06	-5.447087e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-4279-01A-01D-1126-08	57	57	0	36	0	coding only	1	28835288	...	21	32	57	7.282743e-07	1.109751e-06	1.976745e-06	-5.704049e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-4280-01A-01D-1126-08	873	865	8	683	9.163803e-03	coding only	1	28835288	...	182	520	873	6.311711e-06	1.803346e-05	3.027540e-05	-4.518910e+00	...	163	28779098	...	5.663833e-06
TCGA-BR-4292-01A-01D-1126-08	1636	1612	24	1219	1.466993e-02	coding only	1	28835288	...	393	928	1636	1.362913e-05	3.218279e-05	5.673604e-05	-4.246141e+00	...	291	28779098	...	1.011151e-05
TCGA-BR-4294-01A-01D-1126-08	34	34	0	28	0	coding only	1	28835288	...	6	26	34	2.080784e-07	9.016730e-07	1.179111e-06	-5.928445e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-4357-01A-01D-1158-08	282	280	2	214	7.092199e-03	coding only	1	28835288	...	66	208	282	2.288862e-06	7.213384e-06	9.779684e-06	-5.009675e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-4361-01A-01D-1158-08	3348	3307	41	2456	1.224612e-02	coding only	1	28835288	...	851	2095	3348	2.951245e-05	7.265403e-05	1.161077e-04	-3.935139e+00	...	361	28779098	...	1.254383e-05
TCGA-BR-4362-01A-01D-1158-08	2034	1999	35	1535	1.720747e-02	coding only	1	28835288	...	464	1235	2034	1.609139e-05	4.282947e-05	7.053857e-05	-4.151573e+00	...	300	28779098	...	1.042423e-05
TCGA-BR-4363-01A-01D-1158-08	685	677	8	526	1.167883e-02	coding only	1	28835288	...	151	362	685	5.236639e-06	1.255406e-05	2.375561e-05	-4.624234e+00	...	164	28779098	...	5.698580e-06
TCGA-BR-4366-01A-01D-1158-08	165	163	2	121	1.212121e-02	coding only	1	28835288	...	42	119	165	1.456549e-06	4.126888e-06	5.722155e-06	-5.242440e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-4368-01A-01D-1158-08	1617	1603	14	1198	8.658009e-03	coding only	1	28835288	...	405	962	1617	1.404529e-05	3.336190e-05	5.607712e-05	-4.251214e+00	...	236	28779098	...	8.200396e-06
TCGA-BR-4369-01A-01D-1158-08	198	195	3	145	1.515152e-02	coding only	1	28835288	...	50	144	198	1.733986e-06	4.993881e-06	6.866587e-06	-5.163259e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-4370-01A-01D-1158-08	1315	1298	17	975	1.292776e-02	coding only	1	28835288	...	323	778	1315	1.120155e-05	2.698083e-05	4.560384e-05	-4.340999e+00	...	197	28779098	...	6.845246e-06
TCGA-BR-4371-01A-01D-1158-08	182	180	2	132	1.098901e-02	coding only	1	28835288	...	48	132	182	1.664627e-06	4.577724e-06	6.311711e-06	-5.199853e+00	...	0	28779098	...	0
TCGA-BR-6452-01A-12D-1800-08	8721	8631	90	6437	1.031992e-02	coding only	1	28835288	...	2193	6000	8720	7.605265e-05	2.080784e-04	3.024072e-04	-3.519408e+00	...	437	28779098	...	1.518463e-05
TCGA-BR-6453-01A-11D-1800-08	218	216	2	161	9.174312e-03	coding only	1	28835288	...	55	160	218	1.907385e-06	5.548757e-06	7.560181e-06	-5.121468e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-6454-01A-11D-1800-08	174	172	2	130	1.149425e-02	coding only	1	28835288	...	42	121	174	1.456549e-06	4.196247e-06	6.034273e-06	-5.219375e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-6455-01A-11D-1800-08	114	110	4	75	3.508772e-02	coding only	1	28835288	...	35	72	114	1.213791e-06	2.496941e-06	3.953489e-06	-5.403019e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-6456-01A-11D-1800-08	50	50	0	36	0	coding only	1	28835288	...	14	33	50	4.855162e-07	1.144431e-06	1.733986e-06	-5.760954e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-6457-01A-21D-1800-08	141	141	0	105	0	coding only	1	28835288	...	36	104	141	1.248470e-06	3.606692e-06	4.889842e-06	-5.310705e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-6458-01A-11D-1800-08	343	339	4	255	1.166181e-02	coding only	1	28835288	...	84	249	343	2.913097e-06	8.635253e-06	1.189515e-05	-4.924630e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-6563-01A-13D-2053-08	86	85	1	67	1.162791e-02	coding only	1	28835288	...	18	66	86	6.242351e-07	2.288862e-06	2.982457e-06	-5.525426e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-6564-01A-12D-1882-08	41	41	0	29	0	coding only	1	28835288	...	12	26	41	4.161568e-07	9.016730e-07	1.421869e-06	-5.847140e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-6565-01A-11D-1800-08	169	169	0	136	0	coding only	1	28835288	...	33	133	169	1.144431e-06	4.612404e-06	5.860874e-06	-5.232038e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-6566-01A-11D-1800-08	1159	1143	16	854	1.380500e-02	coding only	1	28835288	...	289	717	1159	1.002244e-05	2.486537e-05	4.019381e-05	-4.395841e+00	...	137	28779098	...	4.760399e-06
TCGA-BR-6705-01A-12D-1882-08	119	117	2	90	1.680672e-02	coding only	1	28835288	...	27	90	119	9.363527e-07	3.121176e-06	4.126888e-06	-5.384377e+00	...	0	28779098	...	0
TCGA-BR-6706-01A-11D-1882-08	256	253	3	201	1.171875e-02	coding only	1	28835288	...	52	197	256	1.803346e-06	6.831907e-06	8.878011e-06	-5.051684e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-6707-01A-11D-1882-08	79	79	0	61	0	coding only	1	28835288	...	18	59	79	6.242351e-07	2.046104e-06	2.739699e-06	-5.562297e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-6710-01A-11D-1882-08	1	1	0	1	0	coding only	1	28835288	...	0	0	1	0	0	3.467973e-08	-7.459924e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-6801-01A-11D-1882-08	58	57	1	40	1.724138e-02	coding only	1	28835288	...	17	36	58	5.895554e-07	1.248470e-06	2.011424e-06	-5.696496e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-6802-01A-11D-1882-08	580	574	6	418	1.034483e-02	coding only	1	28835288	...	156	355	580	5.410038e-06	1.231130e-05	2.011424e-05	-4.696496e+00	...	63	28779098	...	2.189089e-06
TCGA-BR-6803-01A-11D-1882-08	20	20	0	16	0	coding only	1	28835288	...	4	14	20	1.387189e-07	4.855162e-07	6.935946e-07	-6.158894e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-6852-01A-11D-1882-08	1362	1351	11	1028	8.076358e-03	coding only	1	28835288	...	323	847	1362	1.120155e-05	2.937373e-05	4.723379e-05	-4.325747e+00	...	181	28779098	...	6.289287e-06
TCGA-BR-7196-01A-11D-2053-08	84	82	2	59	2.380952e-02	coding only	1	28835288	...	23	56	84	7.976338e-07	1.942065e-06	2.913097e-06	-5.535645e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-7197-01A-11D-2201-08	200	196	4	152	2.000000e-02	coding only	1	28835288	...	44	143	200	1.525908e-06	4.959201e-06	6.935946e-06	-5.158894e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-7703-01A-11D-2053-08	858	851	7	651	8.158508e-03	coding only	1	28835288	...	200	530	858	6.935946e-06	1.838026e-05	2.975521e-05	-4.526437e+00	...	120	28779098	...	4.169693e-06
TCGA-BR-7707-01A-11D-2053-08	1705	1693	12	1273	7.038123e-03	coding only	1	28835288	...	420	1089	1705	1.456549e-05	3.776623e-05	5.912894e-05	-4.228200e+00	...	184	28779098	...	6.393529e-06
TCGA-BR-7715-01A-11D-2053-08	162	161	1	125	6.172840e-03	coding only	1	28835288	...	36	116	162	1.248470e-06	4.022849e-06	5.618116e-06	-5.250409e+00	...	8	28779098	...	2.779795e-07
TCGA-BR-7716-01A-21D-2053-08	176	175	1	136	5.681818e-03	coding only	1	28835288	...	39	134	176	1.352509e-06	4.647084e-06	6.103632e-06	-5.214412e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-7717-01A-11D-2053-08	167	165	2	118	1.197605e-02	coding only	1	28835288	...	47	115	167	1.629947e-06	3.988169e-06	5.791515e-06	-5.237208e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-7722-01A-31D-2201-08	60	60	0	46	0	coding only	1	28835288	...	14	42	60	4.855162e-07	1.456549e-06	2.080784e-06	-5.681773e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-7723-01A-11D-2053-08	178	170	8	126	4.494382e-02	exome+100bp flanks	2	35791301	...	44	125	178	1.229349e-06	3.492469e-06	4.973275e-06	-5.303357e+00	...	1	32078718	...	3.117332e-08
TCGA-BR-7851-01A-11D-2201-08	1784	1758	26	1286	1.457399e-02	coding only	1	28835288	...	472	1015	1783	1.636883e-05	3.519993e-05	6.183396e-05	-4.208773e+00	...	271	28779098	...	9.416556e-06
TCGA-BR-7901-01A-11D-2201-08	234	232	2	169	8.547009e-03	coding only	1	28835288	...	63	164	234	2.184823e-06	5.687476e-06	8.115057e-06	-5.090708e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-7957-01A-11D-2201-08	56	54	2	43	3.571429e-02	coding only	1	28835288	...	11	41	56	3.814770e-07	1.421869e-06	1.942065e-06	-5.711736e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-7958-01A-21D-2340-08	181	175	6	139	3.314917e-02	exome+100bp flanks	2	35791301	...	36	132	181	1.005831e-06	3.688047e-06	5.057095e-06	-5.296099e+00	...	7	32078718	...	2.182132e-07
TCGA-BR-7959-01A-11D-2340-08	108	107	1	87	9.259259e-03	coding only	1	28835288	...	20	86	108	6.935946e-07	2.982457e-06	3.745411e-06	-5.426501e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-8058-01A-31D-2340-08	57	55	2	45	3.508772e-02	coding only	1	28835288	...	10	42	57	3.467973e-07	1.456549e-06	1.976745e-06	-5.704049e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8059-01A-11D-2340-08	808	801	7	626	8.663366e-03	coding only	1	28835288	...	175	518	808	6.068953e-06	1.796410e-05	2.802122e-05	-4.552513e+00	...	108	28779098	...	3.752724e-06
TCGA-BR-8077-01A-11D-2340-08	135	135	0	106	0	coding only	1	28835288	...	29	99	135	1.005712e-06	3.433293e-06	4.681764e-06	-5.329591e+00	...	7	28779098	...	2.432321e-07
TCGA-BR-8078-01A-11D-2340-08	1896	1872	24	1468	1.265823e-02	coding only	1	28835288	...	404	1005	1896	1.401061e-05	3.485313e-05	6.575277e-05	-4.182086e+00	...	463	28779098	...	1.608807e-05
TCGA-BR-8080-01A-11D-2340-08	167	166	1	132	5.988024e-03	coding only	1	28835288	...	34	129	167	1.179111e-06	4.473685e-06	5.791515e-06	-5.237208e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8081-01A-11D-2340-08	1091	1078	13	793	1.191567e-02	coding only	1	28835288	...	285	610	1091	9.883723e-06	2.115464e-05	3.783559e-05	-4.422100e+00	...	181	28779098	...	6.289287e-06
TCGA-BR-8284-01A-11D-2340-08	377	372	5	271	1.326260e-02	coding only	1	28835288	...	101	250	377	3.502653e-06	8.669932e-06	1.307426e-05	-4.883583e+00	...	21	28779098	...	7.296963e-07
TCGA-BR-8286-01A-12D-2340-08	163	162	1	111	6.134969e-03	coding only	1	28835288	...	51	99	163	1.768666e-06	3.433293e-06	5.652796e-06	-5.247737e+00	...	12	28779098	...	4.169693e-07
TCGA-BR-8289-01A-11D-2340-08	227	224	3	180	1.321586e-02	coding only	1	28835288	...	44	171	227	1.525908e-06	5.930234e-06	7.872299e-06	-5.103898e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-8291-01A-11D-2340-08	31	30	1	26	3.225806e-02	coding only	1	28835288	...	4	21	30	1.387189e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-8295-01A-11D-2340-08	58	56	2	42	3.448276e-02	coding only	1	28835288	...	14	33	58	4.855162e-07	1.144431e-06	2.011424e-06	-5.696496e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-8296-01A-11D-2340-08	87	87	0	60	0	coding only	1	28835288	...	27	59	87	9.363527e-07	2.046104e-06	3.017137e-06	-5.520405e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-8297-01A-12D-2340-08	301	297	4	222	1.328904e-02	coding only	1	28835288	...	75	218	300	2.600980e-06	7.560181e-06	1.040392e-05	-4.982803e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8360-01A-11D-2340-08	1080	1069	11	792	1.018519e-02	coding only	1	28835288	...	277	594	1080	9.606285e-06	2.059976e-05	3.745411e-05	-4.426501e+00	...	197	28779098	...	6.845246e-06
TCGA-BR-8361-01A-11D-2340-08	1910	1886	24	1441	1.256545e-02	coding only	1	28835288	...	445	1077	1910	1.543248e-05	3.735007e-05	6.623828e-05	-4.178891e+00	...	363	28779098	...	1.261332e-05
TCGA-BR-8363-01A-11D-2340-08	1405	1378	27	1049	1.921708e-02	coding only	1	28835288	...	329	842	1405	1.140963e-05	2.920033e-05	4.872502e-05	-4.312248e+00	...	207	28779098	...	7.192720e-06
TCGA-BR-8364-01A-11D-2340-08	24	23	1	19	4.166667e-02	coding only	1	28835288	...	4	16	24	1.387189e-07	5.548757e-07	8.323135e-07	-6.079713e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8365-01A-21D-2340-08	26	26	0	21	0	coding only	1	28835288	...	5	19	26	1.733986e-07	6.589149e-07	9.016730e-07	-6.044951e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-8366-01A-11D-2340-08	188	186	2	153	1.063830e-02	coding only	1	28835288	...	33	150	188	1.144431e-06	5.201959e-06	6.519789e-06	-5.185766e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8367-01A-11D-2340-08	73	73	0	56	0	coding only	1	28835288	...	17	48	73	5.895554e-07	1.664627e-06	2.531620e-06	-5.596601e+00	...	8	28779098	...	2.779795e-07
TCGA-BR-8368-01A-11D-2340-08	1212	1194	18	887	1.485149e-02	coding only	1	28835288	...	307	638	1212	1.064668e-05	2.212567e-05	4.203183e-05	-4.376422e+00	...	248	28779098	...	8.617365e-06
TCGA-BR-8369-01A-11D-2340-08	230	227	3	178	1.304348e-02	coding only	1	28835288	...	49	173	230	1.699307e-06	5.999593e-06	7.976338e-06	-5.098196e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-8370-01A-11D-2340-08	121	121	0	87	0	coding only	1	28835288	...	34	82	121	1.179111e-06	2.843738e-06	4.196247e-06	-5.377139e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-8371-01A-11D-2340-08	23	23	0	15	0	coding only	1	28835288	...	8	14	23	2.774378e-07	4.855162e-07	7.976338e-07	-6.098196e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-8372-01A-11D-2340-08	1531	1510	21	1141	1.371653e-02	coding only	1	28835288	...	369	872	1531	1.279682e-05	3.024072e-05	5.309467e-05	-4.274949e+00	...	268	28779098	...	9.312314e-06
TCGA-BR-8373-01A-11D-2340-08	108	106	2	72	1.851852e-02	coding only	1	28835288	...	34	63	108	1.179111e-06	2.184823e-06	3.745411e-06	-5.426501e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-8380-01A-11D-2340-08	81	81	0	61	0	coding only	1	28835288	...	20	60	81	6.935946e-07	2.080784e-06	2.809058e-06	-5.551439e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-8381-01A-11D-2394-08	137	137	0	99	0	coding only	1	28835288	...	38	97	137	1.317830e-06	3.363934e-06	4.751123e-06	-5.323204e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-8382-01A-11D-2394-08	1013	1004	9	749	8.884501e-03	coding only	1	28835288	...	255	627	1013	8.843331e-06	2.174419e-05	3.513057e-05	-4.454315e+00	...	122	28779098	...	4.239188e-06
TCGA-BR-8384-01A-21D-2394-08	46	46	0	39	0	coding only	1	28835288	...	7	39	46	2.427581e-07	1.352509e-06	1.595268e-06	-5.797166e+00	...	0	28779098	...	0
TCGA-BR-8483-01A-31D-2394-08	140	140	0	109	0	coding only	1	28835288	...	31	99	140	1.075072e-06	3.433293e-06	4.855162e-06	-5.313796e+00	...	10	28779098	...	3.474744e-07
TCGA-BR-8484-01A-11D-2394-08	95	93	2	61	2.105263e-02	coding only	1	28835288	...	32	60	95	1.109751e-06	2.080784e-06	3.294574e-06	-5.482201e+00	...	0	28779098	...	0
TCGA-BR-8485-01A-11D-2394-08	345	342	3	261	8.695652e-03	coding only	1	28835288	...	81	254	345	2.809058e-06	8.808651e-06	1.196451e-05	-4.922105e+00	...	7	28779098	...	2.432321e-07
TCGA-BR-8486-01A-31D-2394-08	63	63	0	52	0	coding only	1	28835288	...	11	47	63	3.814770e-07	1.629947e-06	2.184823e-06	-5.660584e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-8487-01A-11D-2394-08	3662	3601	61	2750	1.665756e-02	coding only	1	28835288	...	851	2188	3662	2.951245e-05	7.587925e-05	1.269972e-04	-3.896206e+00	...	562	28779098	...	1.952806e-05
TCGA-BR-8588-01A-11D-2394-08	139	137	2	101	1.438849e-02	coding only	1	28835288	...	36	98	139	1.248470e-06	3.398614e-06	4.820482e-06	-5.316909e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8589-01A-11D-2394-08	1223	1212	11	973	8.994276e-03	coding only	1	28835288	...	239	963	1223	8.288455e-06	3.339658e-05	4.241331e-05	-4.372498e+00	...	10	28779098	...	3.474744e-07
TCGA-BR-8590-01A-11D-2394-08	137	133	4	103	2.919708e-02	coding only	1	28835288	...	30	100	137	1.040392e-06	3.467973e-06	4.751123e-06	-5.323204e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-8591-01A-11D-2394-08	1743	1716	27	1297	1.549053e-02	coding only	1	28835288	...	419	1000	1743	1.453081e-05	3.467973e-05	6.044677e-05	-4.218627e+00	...	297	28779098	...	1.031999e-05
TCGA-BR-8592-01A-11D-2394-08	42	41	1	33	2.380952e-02	coding only	1	28835288	...	8	29	42	2.774378e-07	1.005712e-06	1.456549e-06	-5.836675e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-8676-01A-11D-2394-08	92	90	2	69	2.173913e-02	coding only	1	28835288	...	21	63	92	7.282743e-07	2.184823e-06	3.190535e-06	-5.496136e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-8677-01A-11D-2394-08	80	78	2	56	2.500000e-02	coding only	1	28835288	...	22	48	80	7.629541e-07	1.664627e-06	2.774378e-06	-5.556834e+00	...	8	28779098	...	2.779795e-07
TCGA-BR-8678-01A-11D-2394-08	126	126	0	98	0	coding only	1	28835288	...	28	90	126	9.710324e-07	3.121176e-06	4.369646e-06	-5.359554e+00	...	8	28779098	...	2.779795e-07
TCGA-BR-8679-01A-11D-2394-08	175	174	1	131	5.714286e-03	coding only	1	28835288	...	43	125	175	1.491228e-06	4.334966e-06	6.068953e-06	-5.216886e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-8680-01A-11D-2394-08	6673	6598	75	5186	1.123932e-02	coding only	1	28835288	...	1412	5157	6673	4.896778e-05	1.788434e-04	2.314178e-04	-3.635603e+00	...	29	28779098	...	1.007676e-06
TCGA-BR-8682-01A-11D-2394-08	81	81	0	60	0	coding only	1	28835288	...	21	53	81	7.282743e-07	1.838026e-06	2.809058e-06	-5.551439e+00	...	7	28779098	...	2.432321e-07
TCGA-BR-8683-01A-11D-2394-08	165	161	4	121	2.424242e-02	coding only	1	28835288	...	40	116	165	1.387189e-06	4.022849e-06	5.722155e-06	-5.242440e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-8686-01A-11D-2394-08	124	122	2	84	1.612903e-02	coding only	1	28835288	...	38	79	124	1.317830e-06	2.739699e-06	4.300287e-06	-5.366503e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-8687-01A-11D-2394-08	200	199	1	150	5.000000e-03	coding only	1	28835288	...	49	148	200	1.699307e-06	5.132600e-06	6.935946e-06	-5.158894e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-8690-01A-11D-2394-08	178	176	2	130	1.123596e-02	coding only	1	28835288	...	46	124	178	1.595268e-06	4.300287e-06	6.172992e-06	-5.209504e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-A44T-01A-32D-A24D-08	29	29	0	15	0	coding only	1	28835288	...	14	15	29	4.855162e-07	5.201959e-07	1.005712e-06	-5.997526e+00	...	0	28779098	...	0
TCGA-BR-A44U-01A-11D-A24D-08	102	99	3	69	2.941176e-02	coding only	1	28835288	...	30	65	102	1.040392e-06	2.254182e-06	3.537332e-06	-5.451324e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-A452-01A-91D-A25D-08	126	124	2	91	1.587302e-02	coding only	1	28835288	...	33	80	126	1.144431e-06	2.774378e-06	4.369646e-06	-5.359554e+00	...	11	28779098	...	3.822218e-07
TCGA-BR-A453-01A-11D-A24D-08	76	75	1	52	1.315789e-02	coding only	1	28835288	...	23	50	76	7.976338e-07	1.733986e-06	2.635659e-06	-5.579111e+00	...	2	28779098	...	6.949488e-08
TCGA-BR-A4CQ-01A-12D-A25D-08	188	186	2	139	1.063830e-02	coding only	1	28835288	...	47	135	188	1.629947e-06	4.681764e-06	6.519789e-06	-5.185766e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-A4CR-01A-11D-A24D-08	76	76	0	47	0	coding only	1	28835288	...	29	42	76	1.005712e-06	1.456549e-06	2.635659e-06	-5.579111e+00	...	5	28779098	...	1.737372e-07
TCGA-BR-A4CS-01A-11D-A24D-08	182	179	3	130	1.648352e-02	coding only	1	28835288	...	49	124	182	1.699307e-06	4.300287e-06	6.311711e-06	-5.199853e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-A4IU-01A-22D-A25D-08	26	25	1	21	3.846154e-02	coding only	1	28835288	...	4	20	26	1.387189e-07	6.935946e-07	9.016730e-07	-6.044951e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-A4IV-01A-31D-A25D-08	28	27	1	20	3.571429e-02	coding only	1	28835288	...	7	19	28	2.427581e-07	6.589149e-07	9.710324e-07	-6.012766e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-A4IY-01A-11D-A25D-08	156	152	4	118	2.564103e-02	coding only	1	28835288	...	34	107	156	1.179111e-06	3.710731e-06	5.410038e-06	-5.266800e+00	...	11	28779098	...	3.822218e-07
TCGA-BR-A4IZ-01A-32D-A25D-08	10	9	1	9	1.000000e-01	coding only	1	28835288	...	0	9	10	0	3.121176e-07	3.467973e-07	-6.459924e+00	...	0	28779098	...	0
TCGA-BR-A4J1-01A-11D-A25D-08	79	76	3	56	3.797468e-02	coding only	1	28835288	...	20	52	79	6.935946e-07	1.803346e-06	2.739699e-06	-5.562297e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-A4J2-01A-21D-A25D-08	49	49	0	31	0	coding only	1	28835288	...	18	30	49	6.242351e-07	1.040392e-06	1.699307e-06	-5.769728e+00	...	1	28779098	...	3.474744e-08
TCGA-BR-A4J4-01A-12D-A25D-08	89	88	1	73	1.123596e-02	coding only	1	28835288	...	15	70	89	5.201959e-07	2.427581e-06	3.086496e-06	-5.510534e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-A4J6-01A-11D-A25D-08	40	40	0	29	0	coding only	1	28835288	...	11	26	40	3.814770e-07	9.016730e-07	1.387189e-06	-5.857864e+00	...	3	28779098	...	1.042423e-07
TCGA-BR-A4J7-01A-31D-A25D-08	57	57	0	41	0	coding only	1	28835288	...	16	41	57	5.548757e-07	1.421869e-06	1.976745e-06	-5.704049e+00	...	0	28779098	...	0
TCGA-BR-A4J8-01A-11D-A25D-08	111	111	0	72	0	coding only	1	28835288	...	39	68	111	1.352509e-06	2.358222e-06	3.849450e-06	-5.414601e+00	...	4	28779098	...	1.389898e-07
TCGA-BR-A4PD-01A-11D-A25D-08	173	169	4	129	2.312139e-02	coding only	1	28835288	...	40	122	173	1.387189e-06	4.230927e-06	5.999593e-06	-5.221878e+00	...	7	28779098	...	2.432321e-07
TCGA-BR-A4PE-01A-31D-A25D-08	238	231	7	175	2.941176e-02	coding only	1	28835288	...	56	162	238	1.942065e-06	5.618116e-06	8.253776e-06	-5.083347e+00	...	13	28779098	...	4.517167e-07
TCGA-BR-A4PF-01A-11D-A25D-08	110	110	0	92	0	coding only	1	28835288	...	18	83	110	6.242351e-07	2.878418e-06	3.814770e-06	-5.418532e+00	...	9	28779098	...	3.127270e-07
TCGA-BR-A4QI-01A-12D-A25D-08	149	147	2	107	1.342282e-02	coding only	1	28835288	...	40	101	149	1.387189e-06	3.502653e-06	5.167280e-06	-5.286738e+00	...	6	28779098	...	2.084846e-07
TCGA-BR-A4QL-01A-31D-A25D-08	2171	2147	24	1638	1.105481e-02	coding only	1	28835288	...	509	1200	2171	1.765198e-05	4.161568e-05	7.528969e-05	-4.123264e+00	...	437	28779098	...	1.518463e-05
TCGA-BR-A4QM-01A-12D-A25D-08	116	115	1	77	8.620690e-03	coding only	1	28835288	...	38	71	116	1.317830e-06	2.462261e-06	4.022849e-06	-5.395466e+00	...	6	28779098	...	2.084846e-07
TCGA-CD-5798-01A-11D-1600-08	100	99	1	76	1.000000e-02	coding only	1	28835288	...	23	71	100	7.976338e-07	2.462261e-06	3.467973e-06	-5.459924e+00	...	5	28779098	...	1.737372e-07
TCGA-CD-5799-01A-11D-1600-08	54	53	1	36	1.851852e-02	coding only	1	28835288	...	17	35	54	5.895554e-07	1.213791e-06	1.872705e-06	-5.727531e+00	...	1	28779098	...	3.474744e-08
TCGA-CD-5800-01A-11D-1600-08	177	173	4	132	2.259887e-02	coding only	1	28835288	...	41	127	177	1.421869e-06	4.404326e-06	6.138312e-06	-5.211951e+00	...	4	28779098	...	1.389898e-07
TCGA-CD-5801-01A-11D-1600-08	592	584	8	455	1.351351e-02	coding only	1	28835288	...	129	451	592	4.473685e-06	1.564056e-05	2.053040e-05	-4.687603e+00	...	4	28779098	...	1.389898e-07
TCGA-CD-5802-01A-11D-1600-08	62	61	1	47	1.612903e-02	coding only	1	28835288	...	14	40	62	4.855162e-07	1.387189e-06	2.150143e-06	-5.667533e+00	...	7	28779098	...	2.432321e-07
TCGA-CD-5803-01A-11D-1600-08	45	45	0	34	0	coding only	1	28835288	...	11	33	45	3.814770e-07	1.144431e-06	1.560588e-06	-5.806712e+00	...	1	28779098	...	3.474744e-08
TCGA-CD-5804-01A-12D-2053-08	103	101	2	80	1.941748e-02	coding only	1	28835288	...	21	66	102	7.282743e-07	2.288862e-06	3.537332e-06	-5.451324e+00	...	13	28779098	...	4.517167e-07
TCGA-CD-5813-01A-11D-1600-08	195	193	2	151	1.025641e-02	coding only	1	28835288	...	42	141	195	1.456549e-06	4.889842e-06	6.762547e-06	-5.169890e+00	...	10	28779098	...	3.474744e-07
TCGA-CD-8524-01A-11D-2340-08	170	170	0	133	0	coding only	1	28835288	...	37	125	170	1.283150e-06	4.334966e-06	5.895554e-06	-5.229475e+00	...	8	28779098	...	2.779795e-07
TCGA-CD-8525-01A-11D-2340-08	90	86	4	69	4.444444e-02	coding only	1	28835288	...	17	63	90	5.895554e-07	2.184823e-06	3.121176e-06	-5.505682e+00	...	6	28779098	...	2.084846e-07
TCGA-CD-8526-01A-11D-2340-08	49	49	0	43	0	coding only	1	28835288	...	6	38	49	2.080784e-07	1.317830e-06	1.699307e-06	-5.769728e+00	...	5	28779098	...	1.737372e-07
TCGA-CD-8527-01A-11D-2340-08	300	295	5	217	1.666667e-02	coding only	1	28835288	...	78	200	300	2.705019e-06	6.935946e-06	1.040392e-05	-4.982803e+00	...	17	28779098	...	5.907065e-07
TCGA-CD-8528-01A-11D-2340-08	115	114	1	87	8.695652e-03	coding only	1	28835288	...	27	86	115	9.363527e-07	2.982457e-06	3.988169e-06	-5.399226e+00	...	1	28779098	...	3.474744e-08
TCGA-CD-8529-01A-11D-2340-08	451	447	4	340	8.869180e-03	coding only	1	28835288	...	107	314	451	3.710731e-06	1.088944e-05	1.564056e-05	-4.805748e+00	...	25	28779098	...	8.686860e-07
TCGA-CD-8530-01A-11D-2340-08	101	101	0	73	0	coding only	1	28835288	...	28	69	101	9.710324e-07	2.392901e-06	3.502653e-06	-5.455603e+00	...	4	28779098	...	1.389898e-07
TCGA-CD-8531-01A-11D-2340-08	266	265	1	203	3.759398e-03	coding only	1	28835288	...	62	188	266	2.150143e-06	6.519789e-06	9.224808e-06	-5.035043e+00	...	15	28779098	...	5.212116e-07
TCGA-CD-8532-01A-11D-2340-08	55	53	2	34	3.636364e-02	coding only	1	28835288	...	19	27	55	6.589149e-07	9.363527e-07	1.907385e-06	-5.719562e+00	...	7	28779098	...	2.432321e-07
TCGA-CD-8534-01A-11D-2340-08	83	82	1	64	1.204819e-02	coding only	1	28835288	...	18	60	83	6.242351e-07	2.080784e-06	2.878418e-06	-5.540846e+00	...	4	28779098	...	1.389898e-07
TCGA-CD-8535-01A-11D-2340-08	298	293	5	212	1.677852e-02	coding only	1	28835288	...	81	196	298	2.809058e-06	6.797227e-06	1.033456e-05	-4.985708e+00	...	16	28779098	...	5.559591e-07
TCGA-CD-8536-01A-11D-2340-08	1038	1028	10	805	9.633911e-03	coding only	1	28835288	...	223	627	1038	7.733580e-06	2.174419e-05	3.599756e-05	-4.443727e+00	...	178	28779098	...	6.185044e-06
TCGA-CD-A486-01A-11D-A24D-08	106	105	1	84	9.433962e-03	coding only	1	28835288	...	21	74	106	7.282743e-07	2.566300e-06	3.676051e-06	-5.434618e+00	...	10	28779098	...	3.474744e-07
TCGA-CD-A487-01A-21D-A24D-08	202	199	3	156	1.485149e-02	coding only	1	28835288	...	43	151	202	1.491228e-06	5.236639e-06	7.005305e-06	-5.154573e+00	...	5	28779098	...	1.737372e-07
TCGA-CD-A489-01A-11D-A24D-08	87	83	4	63	4.597701e-02	coding only	1	28835288	...	20	62	87	6.935946e-07	2.150143e-06	3.017137e-06	-5.520405e+00	...	1	28779098	...	3.474744e-08
TCGA-CD-A48A-01A-12D-A24D-08	261	260	1	202	3.831418e-03	coding only	1	28835288	...	58	195	261	2.011424e-06	6.762547e-06	9.051410e-06	-5.043284e+00	...	7	28779098	...	2.432321e-07
TCGA-CD-A48C-01A-11D-A24D-08	240	237	3	176	1.250000e-02	coding only	1	28835288	...	61	173	240	2.115464e-06	5.999593e-06	8.323135e-06	-5.079713e+00	...	3	28779098	...	1.042423e-07
TCGA-CD-A4MG-01A-11D-A25D-08	2976	2947	29	2245	9.744624e-03	coding only	1	28835288	...	702	1831	2976	2.434517e-05	6.349859e-05	1.032069e-04	-3.986291e+00	...	413	28779098	...	1.435069e-05
TCGA-CD-A4MH-01A-11D-A25D-08	97	96	1	67	1.030928e-02	coding only	1	28835288	...	29	60	97	1.005712e-06	2.080784e-06	3.363934e-06	-5.473153e+00	...	7	28779098	...	2.432321e-07
TCGA-CD-A4MI-01A-21D-A25D-08	1160	1142	18	845	1.551724e-02	coding only	1	28835288	...	297	726	1160	1.029988e-05	2.517748e-05	4.022849e-05	-4.395466e+00	...	119	28779098	...	4.134945e-06
TCGA-CD-A4MJ-01A-11D-A25D-08	793	782	11	609	1.387137e-02	coding only	1	28835288	...	173	443	793	5.999593e-06	1.536312e-05	2.750103e-05	-4.560651e+00	...	166	28779098	...	5.768075e-06
TCGA-CG-4300-01A-01D-1158-08	159	156	3	120	1.886792e-02	coding only	1	28835288	...	36	116	159	1.248470e-06	4.022849e-06	5.514077e-06	-5.258527e+00	...	4	28779098	...	1.389898e-07
TCGA-CG-4301-01A-01D-1158-08	57	57	0	43	0	coding only	1	28835288	...	14	42	57	4.855162e-07	1.456549e-06	1.976745e-06	-5.704049e+00	...	1	28779098	...	3.474744e-08
TCGA-CG-4304-01A-01D-1158-08	84	84	0	56	0	coding only	1	28835288	...	28	49	84	9.710324e-07	1.699307e-06	2.913097e-06	-5.535645e+00	...	7	28779098	...	2.432321e-07
TCGA-CG-4305-01A-01D-1158-08	1368	1356	12	1017	8.771930e-03	coding only	1	28835288	...	339	808	1368	1.175643e-05	2.802122e-05	4.744187e-05	-4.323838e+00	...	209	28779098	...	7.262215e-06
TCGA-CG-4306-01A-01D-1158-08	1318	1299	19	982	1.441578e-02	coding only	1	28835288	...	317	768	1318	1.099347e-05	2.663403e-05	4.570788e-05	-4.340009e+00	...	214	28779098	...	7.435952e-06
TCGA-CG-4436-01A-01D-1158-08	204	204	0	157	0	coding only	1	28835288	...	47	150	204	1.629947e-06	5.201959e-06	7.074665e-06	-5.150294e+00	...	7	28779098	...	2.432321e-07
TCGA-CG-4437-01A-01D-1800-08	597	589	8	459	1.340034e-02	coding only	1	28835288	...	130	428	597	4.508365e-06	1.484292e-05	2.070380e-05	-4.683950e+00	...	31	28779098	...	1.077171e-06
TCGA-CG-4438-01A-01D-1158-08	156	155	1	124	6.410256e-03	coding only	1	28835288	...	31	120	156	1.075072e-06	4.161568e-06	5.410038e-06	-5.266800e+00	...	4	28779098	...	1.389898e-07
TCGA-CG-4440-01A-01D-1158-08	137	134	3	110	2.189781e-02	coding only	1	28835288	...	24	105	137	8.323135e-07	3.641372e-06	4.751123e-06	-5.323204e+00	...	5	28779098	...	1.737372e-07
TCGA-CG-4441-01A-01D-1800-08	137	135	2	99	1.459854e-02	coding only	1	28835288	...	36	92	137	1.248470e-06	3.190535e-06	4.751123e-06	-5.323204e+00	...	7	28779098	...	2.432321e-07
TCGA-CG-4442-01A-01D-1158-08	1845	1830	15	1389	8.130081e-03	coding only	1	28835288	...	441	1050	1845	1.529376e-05	3.641372e-05	6.398410e-05	-4.193928e+00	...	338	28779098	...	1.174463e-05
TCGA-CG-4443-01A-01D-1158-08	114	113	1	81	8.771930e-03	coding only	1	28835288	...	32	75	114	1.109751e-06	2.600980e-06	3.953489e-06	-5.403019e+00	...	6	28779098	...	2.084846e-07
TCGA-CG-4444-01A-01D-1158-08	202	200	2	141	9.900990e-03	coding only	1	28835288	...	59	138	202	2.046104e-06	4.785803e-06	7.005305e-06	-5.154573e+00	...	3	28779098	...	1.042423e-07
TCGA-CG-4449-01A-01D-1158-08	115	114	1	93	8.695652e-03	coding only	1	28835288	...	21	81	115	7.282743e-07	2.809058e-06	3.988169e-06	-5.399226e+00	...	12	28779098	...	4.169693e-07
TCGA-CG-4455-01A-01D-1158-08	57	56	1	36	1.754386e-02	coding only	1	28835288	...	20	34	57	6.935946e-07	1.179111e-06	1.976745e-06	-5.704049e+00	...	2	28779098	...	6.949488e-08
TCGA-CG-4462-01A-01D-1158-08	85	85	0	56	0	coding only	1	28835288	...	29	55	85	1.005712e-06	1.907385e-06	2.947777e-06	-5.530505e+00	...	1	28779098	...	3.474744e-08
TCGA-CG-4465-01A-01D-1158-08	738	729	9	558	1.219512e-02	coding only	1	28835288	...	171	429	738	5.930234e-06	1.487760e-05	2.559364e-05	-4.591868e+00	...	129	28779098	...	4.482420e-06
TCGA-CG-4466-01A-01D-1158-08	221	215	6	164	2.714932e-02	coding only	1	28835288	...	51	154	221	1.768666e-06	5.340678e-06	7.664220e-06	-5.115532e+00	...	10	28779098	...	3.474744e-07
TCGA-CG-4469-01A-01D-1158-08	343	339	4	267	1.166181e-02	coding only	1	28835288	...	72	259	343	2.496941e-06	8.982050e-06	1.189515e-05	-4.924630e+00	...	8	28779098	...	2.779795e-07
TCGA-CG-4474-01A-02D-1158-08	114	112	2	85	1.754386e-02	coding only	1	28835288	...	27	76	114	9.363527e-07	2.635659e-06	3.953489e-06	-5.403019e+00	...	9	28779098	...	3.127270e-07
TCGA-CG-4475-01A-01D-1158-08	61	61	0	45	0	coding only	1	28835288	...	16	39	61	5.548757e-07	1.352509e-06	2.115464e-06	-5.674594e+00	...	6	28779098	...	2.084846e-07
TCGA-CG-4476-01A-01D-1158-08	140	139	1	113	7.142857e-03	coding only	1	28835288	...	26	109	140	9.016730e-07	3.780091e-06	4.855162e-06	-5.313796e+00	...	4	28779098	...	1.389898e-07
TCGA-CG-4477-01A-01D-1158-08	145	143	2	124	1.379310e-02	coding only	1	28835288	...	19	47	145	6.589149e-07	1.629947e-06	5.028561e-06	-5.298556e+00	...	77	28779098	...	2.675553e-06
TCGA-CG-5717-01A-11D-1600-08	201	197	4	149	1.990050e-02	coding only	1	28835288	...	48	144	201	1.664627e-06	4.993881e-06	6.970626e-06	-5.156728e+00	...	5	28779098	...	1.737372e-07
TCGA-CG-5718-01A-11D-1600-08	99	97	2	76	2.020202e-02	coding only	1	28835288	...	21	72	99	7.282743e-07	2.496941e-06	3.433293e-06	-5.464289e+00	...	4	28779098	...	1.389898e-07
TCGA-CG-5719-01A-11D-1600-08	109	108	1	79	9.174312e-03	coding only	1	28835288	...	29	77	109	1.005712e-06	2.670339e-06	3.780091e-06	-5.422498e+00	...	2	28779098	...	6.949488e-08
TCGA-CG-5720-01A-11D-1600-08	109	109	0	78	0	coding only	1	28835288	...	31	77	109	1.075072e-06	2.670339e-06	3.780091e-06	-5.422498e+00	...	1	28779098	...	3.474744e-08
TCGA-CG-5721-01A-11D-1600-08	5001	4946	55	3709	1.099780e-02	coding only	1	28835288	...	1237	3201	5001	4.289883e-05	1.110098e-04	1.734333e-04	-3.760867e+00	...	508	28779098	...	1.765170e-05
TCGA-CG-5722-01A-21D-1600-08	104	103	1	76	9.615385e-03	coding only	1	28835288	...	27	72	104	9.363527e-07	2.496941e-06	3.606692e-06	-5.442891e+00	...	4	28779098	...	1.389898e-07
TCGA-CG-5723-01A-11D-1600-08	2052	2023	29	1550	1.413255e-02	coding only	1	28835288	...	473	1169	2052	1.640351e-05	4.054060e-05	7.116281e-05	-4.147747e+00	...	381	28779098	...	1.323877e-05
TCGA-CG-5724-01A-11D-1600-08	130	128	2	98	1.538462e-02	coding only	1	28835288	...	30	89	130	1.040392e-06	3.086496e-06	4.508365e-06	-5.345981e+00	...	9	28779098	...	3.127270e-07
TCGA-CG-5726-01A-11D-1600-08	1672	1648	24	1240	1.435407e-02	coding only	1	28835288	...	408	930	1672	1.414933e-05	3.225215e-05	5.798451e-05	-4.236688e+00	...	309	28779098	...	1.073696e-05
TCGA-CG-5727-01A-11D-1600-08	179	177	2	128	1.117318e-02	coding only	1	28835288	...	49	127	179	1.699307e-06	4.404326e-06	6.207672e-06	-5.207071e+00	...	1	28779098	...	3.474744e-08
TCGA-CG-5728-01A-11D-1600-08	1674	1650	24	1238	1.433692e-02	coding only	1	28835288	...	412	948	1674	1.428805e-05	3.287638e-05	5.805387e-05	-4.236169e+00	...	290	28779098	...	1.007676e-05
TCGA-CG-5730-01A-11D-1600-08	194	192	2	133	1.030928e-02	coding only	1	28835288	...	59	126	194	2.046104e-06	4.369646e-06	6.727868e-06	-5.172123e+00	...	7	28779098	...	2.432321e-07
TCGA-CG-5732-01A-11D-1600-08	81	81	0	58	0	coding only	1	28835288	...	23	55	81	7.976338e-07	1.907385e-06	2.809058e-06	-5.551439e+00	...	3	28779098	...	1.042423e-07
TCGA-CG-5733-01A-11D-1600-08	1382	1366	16	1039	1.157742e-02	coding only	1	28835288	...	327	805	1382	1.134027e-05	2.791718e-05	4.792739e-05	-4.319416e+00	...	234	28779098	...	8.130901e-06
TCGA-CG-5734-01A-11D-1600-08	120	120	0	94	0	coding only	1	28835288	...	26	92	119	9.016730e-07	3.190535e-06	4.126888e-06	-5.384377e+00	...	1	28779098	...	3.474744e-08
TCGA-D7-5577-01A-01D-1600-08	133	129	4	104	3.007519e-02	coding only	1	28835288	...	25	98	133	8.669932e-07	3.398614e-06	4.612404e-06	-5.336073e+00	...	6	28779098	...	2.084846e-07
TCGA-D7-5578-01A-01D-1600-08	284	281	3	198	1.056338e-02	coding only	1	28835288	...	83	194	284	2.878418e-06	6.727868e-06	9.849043e-06	-5.006606e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-5579-01A-01D-1600-08	171	169	2	132	1.169591e-02	coding only	1	28835288	...	37	128	171	1.283150e-06	4.439005e-06	5.930234e-06	-5.226928e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-6518-01A-11D-1800-08	113	113	0	83	0	coding only	1	28835288	...	30	78	113	1.040392e-06	2.705019e-06	3.918809e-06	-5.406846e+00	...	5	28779098	...	1.737372e-07
TCGA-D7-6519-01A-11D-1800-08	64	63	1	49	1.562500e-02	coding only	1	28835288	...	14	44	64	4.855162e-07	1.525908e-06	2.219503e-06	-5.653744e+00	...	5	28779098	...	1.737372e-07
TCGA-D7-6520-01A-11D-1800-08	74	74	0	55	0	coding only	1	28835288	...	19	51	74	6.589149e-07	1.768666e-06	2.566300e-06	-5.590693e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-6521-01A-11D-1800-08	92	92	0	71	0	coding only	1	28835288	...	21	70	92	7.282743e-07	2.427581e-06	3.190535e-06	-5.496136e+00	...	1	28779098	...	3.474744e-08
TCGA-D7-6522-01A-11D-1800-08	84	83	1	61	1.190476e-02	coding only	1	28835288	...	22	61	84	7.629541e-07	2.115464e-06	2.913097e-06	-5.535645e+00	...	0	28779098	...	0
TCGA-D7-6524-01A-11D-1800-08	120	116	4	86	3.333333e-02	coding only	1	28835288	...	30	84	120	1.040392e-06	2.913097e-06	4.161568e-06	-5.380743e+00	...	2	28779098	...	6.949488e-08
TCGA-D7-6525-01A-11D-1800-08	185	183	2	131	1.081081e-02	coding only	1	28835288	...	52	124	185	1.803346e-06	4.300287e-06	6.415750e-06	-5.192753e+00	...	7	28779098	...	2.432321e-07
TCGA-D7-6526-01A-11D-1800-08	247	243	4	178	1.619433e-02	coding only	1	28835288	...	65	166	247	2.254182e-06	5.756835e-06	8.565893e-06	-5.067227e+00	...	11	28779098	...	3.822218e-07
TCGA-D7-6527-01A-11D-1800-08	250	244	6	193	2.400000e-02	coding only	1	28835288	...	51	186	250	1.768666e-06	6.450430e-06	8.669932e-06	-5.061984e+00	...	7	28779098	...	2.432321e-07
TCGA-D7-6528-01A-11D-1800-08	393	388	5	304	1.272265e-02	coding only	1	28835288	...	84	293	393	2.913097e-06	1.016116e-05	1.362913e-05	-4.865532e+00	...	11	28779098	...	3.822218e-07
TCGA-D7-6815-01A-11D-1882-08	169	164	5	118	2.958580e-02	coding only	1	28835288	...	46	103	169	1.595268e-06	3.572012e-06	5.860874e-06	-5.232038e+00	...	15	28779098	...	5.212116e-07
TCGA-D7-6817-01A-11D-1882-08	101	98	3	77	2.970297e-02	coding only	1	28835288	...	21	76	101	7.282743e-07	2.635659e-06	3.502653e-06	-5.455603e+00	...	1	28779098	...	3.474744e-08
TCGA-D7-6818-01A-11D-1882-08	174	173	1	143	5.747126e-03	coding only	1	28835288	...	30	138	174	1.040392e-06	4.785803e-06	6.034273e-06	-5.219375e+00	...	5	28779098	...	1.737372e-07
TCGA-D7-6820-01A-11D-1882-08	111	111	0	79	0	coding only	1	28835288	...	32	77	111	1.109751e-06	2.670339e-06	3.849450e-06	-5.414601e+00	...	2	28779098	...	6.949488e-08
TCGA-D7-6822-01A-11D-1882-08	276	275	1	226	3.623188e-03	coding only	1	28835288	...	49	218	276	1.699307e-06	7.560181e-06	9.571605e-06	-5.019015e+00	...	8	28779098	...	2.779795e-07
TCGA-D7-8570-01A-11D-2340-08	145	144	1	108	6.896552e-03	coding only	1	28835288	...	36	96	145	1.248470e-06	3.329254e-06	5.028561e-06	-5.298556e+00	...	12	28779098	...	4.169693e-07
TCGA-D7-8572-01A-11D-2340-08	196	195	1	148	5.102041e-03	coding only	1	28835288	...	47	144	196	1.629947e-06	4.993881e-06	6.797227e-06	-5.167668e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-8573-01A-11D-2340-08	95	94	1	69	1.052632e-02	coding only	1	28835288	...	25	65	95	8.669932e-07	2.254182e-06	3.294574e-06	-5.482201e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-8574-01A-13D-2340-08	35	35	0	24	0	coding only	1	28835288	...	11	22	35	3.814770e-07	7.629541e-07	1.213791e-06	-5.915856e+00	...	2	28779098	...	6.949488e-08
TCGA-D7-8575-01A-11D-2340-08	59	59	0	49	0	coding only	1	28835288	...	10	39	59	3.467973e-07	1.352509e-06	2.046104e-06	-5.689072e+00	...	10	28779098	...	3.474744e-07
TCGA-D7-8576-01A-11D-2340-08	69	69	0	49	0	coding only	1	28835288	...	20	45	69	6.935946e-07	1.560588e-06	2.392901e-06	-5.621075e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-8578-01A-21D-2340-08	59	59	0	47	0	coding only	1	28835288	...	12	45	59	4.161568e-07	1.560588e-06	2.046104e-06	-5.689072e+00	...	2	28779098	...	6.949488e-08
TCGA-D7-8579-01A-11D-2340-08	120	119	1	87	8.333333e-03	coding only	1	28835288	...	32	87	120	1.109751e-06	3.017137e-06	4.161568e-06	-5.380743e+00	...	0	28779098	...	0
TCGA-D7-A4YT-01A-11D-A25D-08	331	330	1	242	3.021148e-03	coding only	1	28835288	...	88	216	331	3.051816e-06	7.490822e-06	1.147899e-05	-4.940096e+00	...	26	28779098	...	9.034335e-07
TCGA-D7-A4YU-01A-21D-A25D-08	240	238	2	193	8.333333e-03	coding only	1	28835288	...	45	187	240	1.560588e-06	6.485109e-06	8.323135e-06	-5.079713e+00	...	6	28779098	...	2.084846e-07
TCGA-D7-A4YV-01A-11D-A25D-08	1048	1035	13	783	1.240458e-02	coding only	1	28835288	...	252	629	1048	8.739292e-06	2.181355e-05	3.634436e-05	-4.439563e+00	...	154	28779098	...	5.351106e-06
TCGA-D7-A4YX-01A-11D-A25D-08	89	88	1	67	1.123596e-02	coding only	1	28835288	...	21	63	89	7.282743e-07	2.184823e-06	3.086496e-06	-5.510534e+00	...	4	28779098	...	1.389898e-07
TCGA-D7-A4YY-01A-11D-A25D-08	567	562	5	401	8.818342e-03	coding only	1	28835288	...	161	292	567	5.583437e-06	1.012648e-05	1.966341e-05	-4.706341e+00	...	109	28779098	...	3.787471e-06
TCGA-D7-A4Z0-01A-22D-A25D-08	332	327	5	263	1.506024e-02	coding only	1	28835288	...	64	258	332	2.219503e-06	8.947370e-06	1.151367e-05	-4.938786e+00	...	5	28779098	...	1.737372e-07
TCGA-EQ-5647-01A-01D-1600-08	102	100	2	70	1.960784e-02	coding only	1	28835288	...	30	70	102	1.040392e-06	2.427581e-06	3.537332e-06	-5.451324e+00	...	0	28779098	...	0
TCGA-EQ-8122-01A-11D-2340-08	210	203	7	154	3.333333e-02	exome+100bp flanks	2	35791301	...	49	147	210	1.369048e-06	4.107143e-06	5.867347e-06	-5.231558e+00	...	7	32078718	...	2.182132e-07
TCGA-EQ-A4SO-01A-11D-A25D-08	199	199	0	158	0	coding only	1	28835288	...	41	136	199	1.421869e-06	4.716443e-06	6.901266e-06	-5.161071e+00	...	22	28779098	...	7.644437e-07
TCGA-F1-6177-01A-11D-1800-08	1571	1543	28	1170	1.782304e-02	coding only	1	28835288	...	373	857	1571	1.293554e-05	2.972053e-05	5.448186e-05	-4.263748e+00	...	313	28779098	...	1.087595e-05
TCGA-F1-6874-01A-11D-1882-08	1111	1095	16	835	1.440144e-02	coding only	1	28835288	...	260	614	1110	9.016730e-06	2.129335e-05	3.849450e-05	-4.414601e+00	...	220	28779098	...	7.644437e-06
TCGA-F1-6875-01A-11D-2053-08	98	98	0	76	0	coding only	1	28835288	...	22	75	98	7.629541e-07	2.600980e-06	3.398614e-06	-5.468698e+00	...	1	28779098	...	3.474744e-08
TCGA-F1-A448-01A-11D-A24D-08	678	671	7	482	1.032448e-02	coding only	1	28835288	...	189	433	678	6.554469e-06	1.501632e-05	2.351286e-05	-4.628695e+00	...	49	28779098	...	1.702625e-06
TCGA-FP-7735-01A-11D-2053-08	72	71	1	54	1.388889e-02	coding only	1	28835288	...	17	49	72	5.895554e-07	1.699307e-06	2.496941e-06	-5.602592e+00	...	5	28779098	...	1.737372e-07
TCGA-FP-7829-01A-11D-2053-08	281	276	5	208	1.779359e-02	coding only	1	28835288	...	68	197	281	2.358222e-06	6.831907e-06	9.745004e-06	-5.011218e+00	...	10	28779098	...	3.474744e-07
TCGA-FP-7916-01A-11D-2201-08	106	106	0	79	0	coding only	1	28835288	...	27	74	106	9.363527e-07	2.566300e-06	3.676051e-06	-5.434618e+00	...	5	28779098	...	1.737372e-07
TCGA-FP-7998-01A-11D-2201-08	78	76	2	58	2.564103e-02	coding only	1	28835288	...	18	58	78	6.242351e-07	2.011424e-06	2.705019e-06	-5.567830e+00	...	0	28779098	...	0
TCGA-FP-8099-01A-11D-2340-08	155	155	0	108	0	coding only	1	28835288	...	47	102	155	1.629947e-06	3.537332e-06	5.375358e-06	-5.269593e+00	...	6	28779098	...	2.084846e-07
TCGA-FP-8209-01A-11D-2340-08	2	2	0	1	0	coding only	1	28835288	...	1	0	2	3.467973e-08	0	6.935946e-08	-7.158894e+00	...	1	28779098	...	3.474744e-08
TCGA-FP-8210-01A-11D-2340-08	6	6	0	5	0	coding only	1	28835288	...	1	5	6	3.467973e-08	1.733986e-07	2.080784e-07	-6.681773e+00	...	0	28779098	...	0
TCGA-FP-8211-01A-11D-2340-08	117	115	2	98	1.709402e-02	coding only	1	28835288	...	17	83	117	5.895554e-07	2.878418e-06	4.057528e-06	-5.391738e+00	...	15	28779098	...	5.212116e-07
TCGA-FP-8631-01A-11D-2394-08	108	107	1	74	9.259259e-03	coding only	1	28835288	...	33	67	108	1.144431e-06	2.323542e-06	3.745411e-06	-5.426501e+00	...	7	28779098	...	2.432321e-07
TCGA-FP-A4BE-01A-12D-A24D-08	1787	1762	25	1335	1.398993e-02	coding only	1	28835288	...	427	1054	1786	1.480824e-05	3.655244e-05	6.193800e-05	-4.208043e+00	...	280	28779098	...	9.729283e-06
TCGA-FP-A4BF-01A-12D-A24D-08	123	123	0	92	0	coding only	1	28835288	...	31	88	123	1.075072e-06	3.051816e-06	4.265607e-06	-5.370019e+00	...	4	28779098	...	1.389898e-07
TCGA-HF-7132-01A-11D-2053-08	1476	1460	16	1091	1.084011e-02	coding only	1	28835288	...	369	880	1476	1.279682e-05	3.051816e-05	5.118728e-05	-4.290838e+00	...	211	28779098	...	7.331710e-06
TCGA-HF-7133-01A-11D-2053-08	86	85	1	67	1.162791e-02	coding only	1	28835288	...	18	62	86	6.242351e-07	2.150143e-06	2.982457e-06	-5.525426e+00	...	5	28779098	...	1.737372e-07
TCGA-HF-7136-01A-11D-2053-08	93	93	0	75	0	coding only	1	28835288	...	18	64	93	6.242351e-07	2.219503e-06	3.225215e-06	-5.491441e+00	...	11	28779098	...	3.822218e-07
TCGA-HJ-7597-01A-21D-2201-08	940	934	6	679	6.382979e-03	coding only	1	28835288	...	255	533	940	8.843331e-06	1.848430e-05	3.259895e-05	-4.486796e+00	...	146	28779098	...	5.073126e-06
TCGA-HU-8243-01A-11D-2340-08	144	142	2	106	1.388889e-02	coding only	1	28835288	...	36	93	144	1.248470e-06	3.225215e-06	4.993881e-06	-5.301562e+00	...	13	28779098	...	4.517167e-07
TCGA-HU-8245-01A-11D-2340-08	78	77	1	62	1.282051e-02	coding only	1	28835288	...	15	51	78	5.201959e-07	1.768666e-06	2.705019e-06	-5.567830e+00	...	11	28779098	...	3.822218e-07
TCGA-HU-8249-01A-11D-2340-08	165	163	2	120	1.212121e-02	coding only	1	28835288	...	43	113	165	1.491228e-06	3.918809e-06	5.722155e-06	-5.242440e+00	...	7	28779098	...	2.432321e-07
TCGA-HU-8602-01A-11D-2394-08	1878	1863	15	1374	7.987220e-03	coding only	1	28835288	...	489	1087	1878	1.695839e-05	3.769687e-05	6.512853e-05	-4.186229e+00	...	287	28779098	...	9.972515e-06
TCGA-HU-8604-01A-11D-2394-08	234	232	2	170	8.547009e-03	coding only	1	28835288	...	62	165	234	2.150143e-06	5.722155e-06	8.115057e-06	-5.090708e+00	...	5	28779098	...	1.737372e-07
TCGA-HU-8608-01A-11D-2394-08	108	108	0	86	0	coding only	1	28835288	...	22	77	108	7.629541e-07	2.670339e-06	3.745411e-06	-5.426501e+00	...	9	28779098	...	3.127270e-07
TCGA-HU-8610-01A-22D-2394-08	74	73	1	60	1.351351e-02	coding only	1	28835288	...	13	55	74	4.508365e-07	1.907385e-06	2.566300e-06	-5.590693e+00	...	5	28779098	...	1.737372e-07
TCGA-HU-A4G2-01A-11D-A25D-08	57	57	0	40	0	coding only	1	28835288	...	17	35	57	5.895554e-07	1.213791e-06	1.976745e-06	-5.704049e+00	...	5	28779098	...	1.737372e-07
TCGA-HU-A4G3-01A-11D-A24D-08	118	117	1	88	8.474576e-03	coding only	1	28835288	...	29	83	118	1.005712e-06	2.878418e-06	4.092208e-06	-5.388042e+00	...	5	28779098	...	1.737372e-07
TCGA-HU-A4G6-01A-11D-A24D-08	95	93	2	69	2.105263e-02	coding only	1	28835288	...	24	59	95	8.323135e-07	2.046104e-06	3.294574e-06	-5.482201e+00	...	10	28779098	...	3.474744e-07
TCGA-HU-A4G8-01A-11D-A25D-08	1754	1735	19	1300	1.083238e-02	coding only	1	28835288	...	435	1009	1754	1.508568e-05	3.499185e-05	6.082825e-05	-4.215895e+00	...	290	28779098	...	1.007676e-05
TCGA-HU-A4G9-01A-11D-A24D-08	932	919	13	693	1.394850e-02	coding only	1	28835288	...	226	516	932	7.837619e-06	1.789474e-05	3.232151e-05	-4.490508e+00	...	177	28779098	...	6.150297e-06
TCGA-HU-A4GC-01A-12D-A25D-08	167	164	3	120	1.796407e-02	coding only	1	28835288	...	44	116	167	1.525908e-06	4.022849e-06	5.791515e-06	-5.237208e+00	...	4	28779098	...	1.389898e-07
TCGA-HU-A4GD-01A-11D-A25D-08	96	94	2	71	2.083333e-02	coding only	1	28835288	...	23	65	96	7.976338e-07	2.254182e-06	3.329254e-06	-5.477653e+00	...	6	28779098	...	2.084846e-07
TCGA-HU-A4GF-01A-11D-A24D-08	152	150	2	118	1.315789e-02	coding only	1	28835288	...	32	108	152	1.109751e-06	3.745411e-06	5.271319e-06	-5.278081e+00	...	10	28779098	...	3.474744e-07
TCGA-HU-A4GH-01A-11D-A24D-08	850	838	12	689	1.411765e-02	coding only	1	28835288	...	149	674	850	5.167280e-06	2.337414e-05	2.947777e-05	-4.530505e+00	...	14	28779098	...	4.864642e-07
TCGA-HU-A4GN-01A-11D-A25D-08	1389	1371	18	1021	1.295896e-02	coding only	1	28835288	...	350	838	1389	1.213791e-05	2.906161e-05	4.817014e-05	-4.317222e+00	...	183	28779098	...	6.358782e-06
TCGA-HU-A4GP-01A-11D-A25D-08	213	211	2	151	9.389671e-03	coding only	1	28835288	...	60	140	213	2.080784e-06	4.855162e-06	7.386782e-06	-5.131545e+00	...	11	28779098	...	3.822218e-07
TCGA-HU-A4GQ-01A-11D-A25D-08	2160	2119	41	1592	1.898148e-02	coding only	1	28835288	...	527	1255	2160	1.827622e-05	4.352306e-05	7.490822e-05	-4.125471e+00	...	337	28779098	...	1.170989e-05
TCGA-HU-A4GT-01A-21D-A25D-08	1987	1958	29	1485	1.459487e-02	coding only	1	28835288	...	473	1148	1987	1.640351e-05	3.981233e-05	6.890862e-05	-4.161726e+00	...	337	28779098	...	1.170989e-05
TCGA-HU-A4GU-01A-11D-A25D-08	1745	1718	27	1262	1.547278e-02	coding only	1	28835288	...	456	1057	1744	1.581396e-05	3.665647e-05	6.048145e-05	-4.218378e+00	...	204	28779098	...	7.088478e-06
TCGA-HU-A4GX-01A-12D-A25D-08	1455	1437	18	1093	1.237113e-02	coding only	1	28835288	...	344	821	1454	1.192983e-05	2.847206e-05	5.042433e-05	-4.297360e+00	...	270	28779098	...	9.381809e-06
TCGA-HU-A4GY-01A-21D-A24D-08	74	72	2	54	2.702703e-02	coding only	1	28835288	...	18	53	74	6.242351e-07	1.838026e-06	2.566300e-06	-5.590693e+00	...	1	28779098	...	3.474744e-08
TCGA-HU-A4H0-01A-11D-A25D-08	195	194	1	147	5.128205e-03	coding only	1	28835288	...	47	140	195	1.629947e-06	4.855162e-06	6.762547e-06	-5.169890e+00	...	7	28779098	...	2.432321e-07
TCGA-HU-A4H2-01A-11D-A25D-08	189	183	6	142	3.174603e-02	exome+100bp flanks	2	35791301	...	41	139	189	1.145530e-06	3.883625e-06	5.280613e-06	-5.277316e+00	...	3	32078718	...	9.351995e-08
TCGA-HU-A4H3-01A-21D-A25D-08	1075	1059	16	812	1.488372e-02	coding only	1	28835288	...	247	593	1075	8.565893e-06	2.056508e-05	3.728071e-05	-4.428516e+00	...	219	28779098	...	7.609690e-06
TCGA-HU-A4H4-01A-21D-A25D-08	791	782	9	576	1.137800e-02	coding only	1	28835288	...	206	522	791	7.144024e-06	1.810282e-05	2.743167e-05	-4.561748e+00	...	54	28779098	...	1.876362e-06
TCGA-HU-A4H5-01A-21D-A25D-08	299	296	3	236	1.003344e-02	coding only	1	28835288	...	60	219	299	2.080784e-06	7.594861e-06	1.036924e-05	-4.984253e+00	...	17	28779098	...	5.907065e-07
TCGA-HU-A4H6-01A-11D-A25D-08	100	99	1	71	1.000000e-02	coding only	1	28835288	...	28	70	100	9.710324e-07	2.427581e-06	3.467973e-06	-5.459924e+00	...	1	28779098	...	3.474744e-08
TCGA-HU-A4H8-01A-11D-A25D-08	1416	1395	21	1047	1.483051e-02	coding only	1	28835288	...	348	812	1416	1.206855e-05	2.815994e-05	4.910650e-05	-4.308861e+00	...	235	28779098	...	8.165649e-06
TCGA-HU-A4HD-01A-11D-A25D-08	199	196	3	147	1.507538e-02	coding only	1	28835288	...	49	140	199	1.699307e-06	4.855162e-06	6.901266e-06	-5.161071e+00	...	7	28779098	...	2.432321e-07
TCGA-IN-7806-01A-11D-2053-08	87	87	0	69	0	coding only	1	28835288	...	18	65	87	6.242351e-07	2.254182e-06	3.017137e-06	-5.520405e+00	...	4	28779098	...	1.389898e-07
TCGA-IN-7808-01A-11D-2201-08	122	120	2	94	1.639344e-02	coding only	1	28835288	...	26	91	122	9.016730e-07	3.155855e-06	4.230927e-06	-5.373564e+00	...	3	28779098	...	1.042423e-07
TCGA-IN-8462-01A-11D-2340-08	135	133	2	100	1.481481e-02	coding only	1	28835288	...	33	90	135	1.144431e-06	3.121176e-06	4.681764e-06	-5.329591e+00	...	10	28779098	...	3.474744e-07
TCGA-IN-8663-01A-11D-2394-08	186	185	1	136	5.376344e-03	coding only	1	28835288	...	49	130	186	1.699307e-06	4.508365e-06	6.450430e-06	-5.190411e+00	...	6	28779098	...	2.084846e-07
TCGA-IP-7968-01A-11D-2201-08	130	128	2	102	1.538462e-02	coding only	1	28835288	...	26	96	130	9.016730e-07	3.329254e-06	4.508365e-06	-5.345981e+00	...	6	28779098	...	2.084846e-07
