tcga_participant_barcode CLI_years_to_birth CLI_vital_status CLI_days_to_death CLI_days_to_last_followup CLI_tumor_tissue_site CLI_pathologic_stage CLI_pathology_T_stage CLI_pathology_N_stage CLI_pathology_M_stage CLI_gender CLI_date_of_initial_pathologic_diagnosis CLI_days_to_last_known_alive CLI_radiation_therapy CLI_histological_type CLI_number_of_lymph_nodes CLI_race CLI_ethnicity CLUS_mRNA_cNMF CLUS_mRNA_cHierarchical CLUS_CN_cNMF CLUS_Methlyation_cNMF CLUS_RPPA_cNMF CLUS_RPPA_cHierarchical CLUS_mRNAseq_cNMF CLUS_mRNAseq_cHierarchical CLUS_miRseq_cNMF CLUS_miRseq_cHierarchical CLUS_miRseq_Mature_cNMF CLUS_miRseq_Mature_cHierarchical SMG_mutsig2.0_ACTL6B SMG_mutsig2.0_APC_cosmic SMG_mutsig2.0_AQP12A SMG_mutsig2.0_ASXL2 SMG_mutsig2.0_CASP8 SMG_mutsig2.0_CBFB SMG_mutsig2.0_CDH1 SMG_mutsig2.0_CDKN1B SMG_mutsig2.0_CTCF SMG_mutsig2.0_ERBB2 SMG_mutsig2.0_FAM20C SMG_mutsig2.0_FAM86B1 SMG_mutsig2.0_FBXW7 SMG_mutsig2.0_FGFR2_cosmic SMG_mutsig2.0_FOXA1 SMG_mutsig2.0_GATA3 SMG_mutsig2.0_GPRIN2 SMG_mutsig2.0_GPS2 SMG_mutsig2.0_HIST1H2BC SMG_mutsig2.0_HIST1H3B SMG_mutsig2.0_HLA-DRB5 SMG_mutsig2.0_KRAS SMG_mutsig2.0_MAP2K4 SMG_mutsig2.0_MAP3K1 SMG_mutsig2.0_MYB SMG_mutsig2.0_NCOR1 SMG_mutsig2.0_PIK3CA SMG_mutsig2.0_PIK3R1 SMG_mutsig2.0_PIWIL1 SMG_mutsig2.0_PTEN SMG_mutsig2.0_PTGER2 SMG_mutsig2.0_PTPN22_cosmic SMG_mutsig2.0_RAB42 SMG_mutsig2.0_RB1 SMG_mutsig2.0_RUNX1 SMG_mutsig2.0_SF3B1 SMG_mutsig2.0_SMAD2_cosmic SMG_mutsig2.0_SMAD4_cosmic SMG_mutsig2.0_TAF1L_cosmic SMG_mutsig2.0_TBL1XR1 SMG_mutsig2.0_TBX3 SMG_mutsig2.0_TCP10 SMG_mutsig2.0_TNFSF8 SMG_mutsig2.0_TP53 SMG_mutsig2.0_VCPIP1_cosmic SMG_mutsig2.0_WSCD2 SMG_mutsig2.0_ZFP36L1 SMG_mutsig2.0_ZFP36L2 SMG_mutsig2.0_ZP4 SMG_mutsig.CV_ANKRD12 SMG_mutsig.CV_APC_cosmic SMG_mutsig.CV_AQP12A SMG_mutsig.CV_ARID1A SMG_mutsig.CV_CASP8 SMG_mutsig.CV_CBFB SMG_mutsig.CV_CDH1 SMG_mutsig.CV_CDKN1B SMG_mutsig.CV_COL6A5 SMG_mutsig.CV_CTCF SMG_mutsig.CV_DNAH12 SMG_mutsig.CV_ERBB2_cosmic SMG_mutsig.CV_FAM86B1 SMG_mutsig.CV_FBXW7 SMG_mutsig.CV_FGFR2_cosmic SMG_mutsig.CV_FOXA1 SMG_mutsig.CV_GATA3 SMG_mutsig.CV_GPRIN2 SMG_mutsig.CV_GPS2 SMG_mutsig.CV_GRHL2 SMG_mutsig.CV_HIST1H3B SMG_mutsig.CV_HMGB3 SMG_mutsig.CV_HRNR SMG_mutsig.CV_ICOSLG SMG_mutsig.CV_KRAS_cosmic SMG_mutsig.CV_MAP2K4 SMG_mutsig.CV_MAP3K1 SMG_mutsig.CV_MYB SMG_mutsig.CV_MYH9 SMG_mutsig.CV_NCOR1 SMG_mutsig.CV_NF1 SMG_mutsig.CV_OR2T35 SMG_mutsig.CV_PIK3CA SMG_mutsig.CV_PIK3R1 SMG_mutsig.CV_PTEN SMG_mutsig.CV_PTPN22_cosmic SMG_mutsig.CV_RB1 SMG_mutsig.CV_RUNX1 SMG_mutsig.CV_SHISA4 SMG_mutsig.CV_SMAD2_cosmic SMG_mutsig.CV_SMAD4_cosmic SMG_mutsig.CV_TAF1L_cosmic SMG_mutsig.CV_TBL1XR1 SMG_mutsig.CV_TBX3 SMG_mutsig.CV_TMEM151B SMG_mutsig.CV_TP53 SMG_mutsig.CV_VCPIP1_cosmic SMG_mutsig.CV_ZFP36L1 SMG_mutsig.CV_ZFP36L2 SMG_mutsig.2CV_ACTL6B SMG_mutsig.2CV_APC_cosmic SMG_mutsig.2CV_AQP12A SMG_mutsig.2CV_ARID1A SMG_mutsig.2CV_C17orf95 SMG_mutsig.2CV_CASZ1 SMG_mutsig.2CV_CBFB SMG_mutsig.2CV_CDC42EP1 SMG_mutsig.2CV_CDH1 SMG_mutsig.2CV_CDKN1B SMG_mutsig.2CV_CTCF SMG_mutsig.2CV_ERBB2 SMG_mutsig.2CV_EYS SMG_mutsig.2CV_FBXW7 SMG_mutsig.2CV_FGFR2 SMG_mutsig.2CV_FOXA1 SMG_mutsig.2CV_FRMPD2 SMG_mutsig.2CV_GATA3 SMG_mutsig.2CV_GPRIN2 SMG_mutsig.2CV_GPS2 SMG_mutsig.2CV_HRNR SMG_mutsig.2CV_ICOSLG SMG_mutsig.2CV_IL1RAP SMG_mutsig.2CV_IRS4 SMG_mutsig.2CV_KCNN3 SMG_mutsig.2CV_KDM6A SMG_mutsig.2CV_KRAS SMG_mutsig.2CV_MAP2K4 SMG_mutsig.2CV_MAP3K1 SMG_mutsig.2CV_MED23 SMG_mutsig.2CV_MLL3 SMG_mutsig.2CV_MUC6 SMG_mutsig.2CV_MYB SMG_mutsig.2CV_MYH9 SMG_mutsig.2CV_NBPF9 SMG_mutsig.2CV_NCDN SMG_mutsig.2CV_NCOR1 SMG_mutsig.2CV_NF1 SMG_mutsig.2CV_NLGN3 SMG_mutsig.2CV_PAX2 SMG_mutsig.2CV_PIK3CA SMG_mutsig.2CV_PIK3R1_cosmic SMG_mutsig.2CV_PTEN SMG_mutsig.2CV_PTPN22_cosmic SMG_mutsig.2CV_RAB42 SMG_mutsig.2CV_RB1 SMG_mutsig.2CV_RBMX SMG_mutsig.2CV_RUFY1 SMG_mutsig.2CV_RUNX1 SMG_mutsig.2CV_SF3B1 SMG_mutsig.2CV_SMAD2_cosmic SMG_mutsig.2CV_SMAD4_cosmic SMG_mutsig.2CV_SP3 SMG_mutsig.2CV_SPEN SMG_mutsig.2CV_TAF1L_cosmic SMG_mutsig.2CV_TBL1XR1 SMG_mutsig.2CV_TBX3 SMG_mutsig.2CV_TCP11 SMG_mutsig.2CV_TFE3 SMG_mutsig.2CV_TGS1 SMG_mutsig.2CV_TP53 SMG_mutsig.2CV_TPP2 SMG_mutsig.2CV_USP36 SMG_mutsig.2CV_VCPIP1_cosmic SMG_mutsig.2CV_ZBTB7C SMG_mutsig.2CV_ZFP36L1 SMG_mutsig.2CV_ZFP36L2 SMG_mutsig.2CV_ZMYM3 SMG_mutsig.2CV_ZNF362 rate_non rate_sil SMG_ANKRD12_mRNA SMG_APC_mRNA SMG_ARID1A_mRNA SMG_ASXL2_mRNA SMG_C17orf95_mRNA SMG_CASP8_mRNA SMG_CASZ1_mRNA SMG_CBFB_mRNA SMG_CDC42EP1_mRNA SMG_CDH1_mRNA SMG_CDKN1B_mRNA SMG_CTCF_mRNA SMG_DNAH12_mRNA SMG_ERBB2_mRNA SMG_EYS_mRNA SMG_FAM20C_mRNA SMG_FAM86B1_mRNA SMG_FBXW7_mRNA SMG_FGFR2_mRNA SMG_FOXA1_mRNA SMG_FRMPD2_mRNA SMG_GATA3_mRNA SMG_GPRIN2_mRNA SMG_GPS2_mRNA SMG_GRHL2_mRNA SMG_HIST1H2BC_mRNA SMG_HIST1H3B_mRNA SMG_HLA-DRB5_mRNA SMG_HMGB3_mRNA SMG_HRNR_mRNA SMG_ICOSLG_mRNA SMG_IL1RAP_mRNA SMG_IRS4_mRNA SMG_KCNN3_mRNA SMG_KDM6A_mRNA SMG_KRAS_mRNA SMG_MAP2K4_mRNA SMG_MAP3K1_mRNA SMG_MED23_mRNA SMG_MLL3_mRNA SMG_MUC6_mRNA SMG_MYB_mRNA SMG_MYH9_mRNA SMG_NBPF9_mRNA SMG_NCDN_mRNA SMG_NCOR1_mRNA SMG_NF1_mRNA SMG_NLGN3_mRNA SMG_PAX2_mRNA SMG_PIK3CA_mRNA SMG_PIK3R1_mRNA SMG_PIWIL1_mRNA SMG_PTEN_mRNA SMG_PTGER2_mRNA SMG_PTPN22_mRNA SMG_RAB42_mRNA SMG_RB1_mRNA SMG_RBMX_mRNA SMG_RUFY1_mRNA SMG_RUNX1_mRNA SMG_SF3B1_mRNA SMG_SHISA4_mRNA SMG_SMAD2_mRNA SMG_SMAD4_mRNA SMG_SP3_mRNA SMG_SPEN_mRNA SMG_TAF1L_mRNA SMG_TBL1XR1_mRNA SMG_TBX3_mRNA SMG_TCP11_mRNA SMG_TFE3_mRNA SMG_TGS1_mRNA SMG_TMEM151B_mRNA SMG_TNFSF8_mRNA SMG_TP53_mRNA SMG_TPP2_mRNA SMG_USP36_mRNA SMG_VCPIP1_mRNA SMG_WSCD2_mRNA SMG_ZBTB7C_mRNA SMG_ZFP36L1_mRNA SMG_ZFP36L2_mRNA SMG_ZMYM3_mRNA SMG_ZNF362_mRNA Amp_1p22.3 Amp_1q21.3 Amp_1q44 Amp_3p25.1 Amp_3q26.32 Amp_4q13.3 Amp_5p15.33 Amp_6p23 Amp_6q21 Amp_8p11.23 Amp_8p11.21 Amp_8q24.21 Amp_10p15.1 Amp_10q22.3 Amp_11p13 Amp_11q13.3 Amp_11q14.1 Amp_12p13.33 Amp_12q15 Amp_13q34 Amp_14q21.1 Amp_15q26.3 Amp_17p11.2 Amp_17q12 Amp_17q23.1 Amp_19p13.12 Amp_19q12 Amp_19q13.42 Amp_20q13.2 Del_1p36.13 Del_1p22.1 Del_2q37.3 Del_3p21.31 Del_4p16.3 Del_4q35.1 Del_5q11.2 Del_5q21.3 Del_6p25.3 Del_6q15 Del_6q27 Del_7p22.3 Del_7q36.1 Del_8p23.2 Del_9p23 Del_9p21.3 Del_9q21.11 Del_9q34.2 Del_10q23.31 Del_10q26.3 Del_11p15.5 Del_11q13.1 Del_11q23.3 Del_11q25 Del_12p13.1 Del_12q23.1 Del_12q24.31 Del_13q14.2 Del_14q24.1 Del_15q13.1 Del_16q24.3 Del_17p12 Del_17q21.31 Del_18q23 Del_19p13.3 Del_19q13.32 Del_20p13 Del_21q11.2 Del_22q13.32 CN_10p_Amp CN_10q_Amp CN_11p_Amp CN_11q_Amp CN_12p_Amp CN_12q_Amp CN_13q_Amp CN_14q_Amp CN_15q_Amp CN_16p_Amp CN_16q_Amp CN_17p_Amp CN_17q_Amp CN_18p_Amp CN_18q_Amp CN_19p_Amp CN_19q_Amp CN_1p_Amp CN_1q_Amp CN_20p_Amp CN_20q_Amp CN_21q_Amp CN_22q_Amp CN_2p_Amp CN_2q_Amp CN_3p_Amp CN_3q_Amp CN_4p_Amp CN_4q_Amp CN_5p_Amp CN_5q_Amp CN_6p_Amp CN_6q_Amp CN_7p_Amp CN_7q_Amp CN_8p_Amp CN_8q_Amp CN_9p_Amp CN_9q_Amp CN_Xp_Amp CN_Xq_Amp CN_10p_Del CN_10q_Del CN_11p_Del CN_11q_Del CN_12p_Del CN_12q_Del CN_13q_Del CN_14q_Del CN_15q_Del CN_16p_Del CN_16q_Del CN_17p_Del CN_17q_Del CN_18p_Del CN_18q_Del CN_19p_Del CN_19q_Del CN_1p_Del CN_1q_Del CN_20p_Del CN_20q_Del CN_21q_Del CN_22q_Del CN_2p_Del CN_2q_Del CN_3p_Del CN_3q_Del CN_4p_Del CN_4q_Del CN_5p_Del CN_5q_Del CN_6p_Del CN_6q_Del CN_7p_Del CN_7q_Del CN_8p_Del CN_8q_Del CN_9p_Del CN_9q_Del CN_Xp_Del CN_Xq_Del mRNA_CNMF_IL16_0.44_1 mRNA_CNMF_MMP14_1.05_1 mRNA_CNMF_MUM1L1_2.45_1 mRNA_CNMF_FLJ10357_0.44_1 mRNA_CNMF_GP1BA_-0.61_1 mRNA_CNMF_FOXP4_-0.42_1 mRNA_CNMF_FAM129C_-0.45_1 mRNA_CNMF_SLC6A2_-0.49_1 mRNA_CNMF_CPSF4_-0.33_1 mRNA_CNMF_APCDD1_0.58_2 mRNA_CNMF_CCKBR_-0.53_2 mRNA_CNMF_STON1_0.63_2 mRNA_CNMF_IRX6_-0.32_2 mRNA_CNMF_PSMD14_-0.3_2 mRNA_CNMF_AKAP8_-0.33_2 mRNA_CNMF_ITGA2B_-0.24_2 mRNA_CNMF_ABI3BP_0.88_2 mRNA_CNMF_BTBD3_-0.3_3 mRNA_CNMF_DUSP4_-0.75_3 mRNA_CNMF_DCXR_0.38_3 mRNA_CNMF_PIGG_0.25_3 mRNA_CNMF_ZNF417_0.21_3 mRNA_CNMF_MCAM_-0.32_3 mRNA_CNMF_LILRA1_-0.22_3 mRNA_CNMF_CHDH_0.47_3 mRNA_CNMF_MKL1_-0.19_3 mRNA_CNMF_ADAMTS8_-0.39_4 mRNA_CNMF_WFDC13_-0.25_4 mRNA_CNMF_PPP1R9B_-0.23_4 mRNA_CNMF_GAS2_0.76_4 mRNA_CNMF_RPS25_0.25_4 mRNA_CNMF_DDOST_0.22_4 mRNA_CNMF_RCAN2_0.43_4 mRNA_CNMF_LMBRD1_-0.27_4 mRNA_CNMF_IFI44_-0.64_5 mRNA_CNMF_TIMM50_-0.18_5 mRNA_CNMF_SCN8A_-0.4_5 mRNA_CNMF_CAMK1G_-0.22_5 mRNA_CNMF_FLJ14107_0.22_5 mRNA_CNMF_FOXJ1_0.57_5 mRNA_CNMF_GCDH_0.25_5 mRNA_CNMF_FKBP2_0.34_5 mRNA_CNMF_GPR160_0.85_6 mRNA_CNMF_TMEM100_-0.76_6 mRNA_CNMF_PLXNB3_0.51_6 mRNA_CNMF_COMTD1_0.7_6 mRNA_CNMF_GLOD4_-0.31_6 mRNA_CNMF_RNF152_0.73_6 mRNA_CNMF_PRPSAP1_-0.5_6 mRNA_CNMF_OLAH_-0.56_6 mRNA_CNMF_NFIX_-0.58_6 mRNA_CNMF_HS3ST3B1_0.71_7 mRNA_CNMF_CACNB2_-0.32_7 mRNA_CNMF_ARMC10_-0.43_7 mRNA_CNMF_HYAL3_-0.63_7 mRNA_CNMF_FCRL5_1.63_7 mRNA_CNMF_TMEM173_0.54_7 mRNA_CNMF_CMKLR1_1.03_7 mRNA_CNMF_MGC29506_1.37_7 mRNA_CNMF_SBSN_-0.92_7 mRNA_CNMF_NACA_0.26_8 mRNA_CNMF_UNC45B_0.36_8 mRNA_CNMF_VPS4A_-0.19_8 mRNA_CNMF_KRTAP17-1_-0.42_8 mRNA_CNMF_SLC35F2_-0.45_8 mRNA_CNMF_ATP1B2_0.21_8 mRNA_CNMF_MOSPD1_-0.24_8 mRNA_CNMF_CRYL1_0.37_8 Amp_CCND1_11q13.3_mRNA Amp_CCNE1_19q12_mRNA Amp_COX18_4q13.3_mRNA Amp_ERBB2_17q12_mRNA Amp_ERCC5_13q34_mRNA Amp_FH_1q44_mRNA Amp_FOXA1_14q21.1_mRNA Amp_IGF1R_15q26.3_mRNA Amp_INTS4_11q14.1_mRNA Amp_KDM5A_12p13.33_mRNA Amp_MCL1_1q21.3_mRNA Amp_MYC_8q24.21_mRNA Amp_PIK3CA_3q26.32_mRNA Amp_SMYD3_1q44_mRNA Amp_TERT_5p15.33_mRNA Amp_TUBD1_17q23.1_mRNA Amp_ZNF217_20q13.2_mRNA Del_ABL1_9q34.2_mRNA Del_ANKS1B_12q23.1_mRNA Del_BCL10_1p22.1_mRNA Del_BCL7A_12q24.31_mRNA Del_BRCA1_17q21.31_mRNA Del_BRD3_9q34.2_mRNA Del_CARD11_7p22.3_mRNA Del_CBFA2T3_16q24.3_mRNA Del_CDKN1B_12p13.1_mRNA Del_CDKN2A_9p21.3_mRNA Del_CSMD1_8p23.2_mRNA Del_ETV4_17q21.31_mRNA Del_FANCA_16q24.3_mRNA Del_FAT1_4q35.1_mRNA Del_FNBP1_9q34.2_mRNA Del_GPHN_14q24.1_mRNA Del_HRAS_11p15.5_mRNA Del_IL6ST_5q11.2_mRNA Del_IRF4_6p25.3_mRNA Del_MALAT1_11q13.1_mRNA Del_MAP2K4_17p12_mRNA Del_MAX_14q24.1_mRNA Del_MEN1_11q13.1_mRNA Del_MLLT4_6q27_mRNA Del_NOTCH1_9q34.2_mRNA Del_NUP214_9q34.2_mRNA Del_PAFAH1B2_11q23.3_mRNA Del_PAX7_1p36.13_mRNA Del_PCSK7_11q23.3_mRNA Del_POU2AF1_11q23.3_mRNA Del_PTEN_10q23.31_mRNA Del_PTPRD_9p23_mRNA Del_RALGDS_9q34.2_mRNA Del_RB1_13q14.2_mRNA Del_RBM15_1p22.1_mRNA Del_RPL5_1p22.1_mRNA Del_SDHB_1p36.13_mRNA Del_SDHD_11q23.3_mRNA Del_STAT3_17q21.31_mRNA Del_TCF3_19p13.3_mRNA Del_TSC1_9q34.2_mRNA Del_TSHR_14q24.1_mRNA TCGA-3C-AAAU 55 0 NA 3928 breast stage x tx nx mx female 2004 NA no infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6120352 9.9809103 12.3933314 9.3573006 8.2961307 9.0482035 11.4286644 10.3906484 9.8366499 14.1289931 11.6439271 11.0437350 1.2705887 12.7963263 3.4174340 9.9565960 7.8119693 7.8895058 6.5559986 12.4116081 2.5507037 13.8075021 5.1911599 9.8088567 11.3283942 9.3328348 1.4632562 9.9288072 10.4039215 2.4632301 7.4490826 7.6505930 NA 3.8895027 10.3301334 10.2604970 10.2417287 11.7361622 9.1169817 12.0044585 2.5507037 10.6063052 14.4565110 9.4083336 10.9640579 11.4911469 11.4949421 4.9389726 8.2897893 8.9277866 11.3022478 NA 10.7518186 3.4174340 6.8512581 4.1636839 8.9550939 12.0930528 10.1545481 12.9157395 12.2393654 7.9267651 10.9814022 10.8425515 10.7001519 11.9327555 6.2114328 11.7287094 12.2938551 -0.5367961 10.3821041 9.2544037 3.8320089 3.5507037 10.4362207 9.9520853 11.1960442 9.7164975 7.3024443 8.7182695 10.6440824 11.3287808 11.1431607 9.5021599 0.215910 3.656900 0.186850 -0.457580 0.258620 3.656900 0.165860 0.146970 -1.088300 0.197710 0.197710 0.221630 -0.482710 -0.467590 0.184340 2.096500 2.603700 0.186160 3.656900 -0.453400 -0.427890 0.118440 -0.567340 0.078294 0.078294 0.000000 0.000000 0.000000 1.823800 0.068865 0.215910 -0.399080 -0.465890 -0.471730 -0.380240 0.247580 0.287490 0.146970 -1.088300 -1.119000 0.226690 0.208700 0.182920 -0.457680 -0.488030 -0.488030 -0.488030 -0.467590 -0.467590 0.105410 -0.599930 -0.465250 -0.465250 0.186160 -0.469820 -0.469820 -1.080300 -0.491040 0.149500 0.122690 -0.567340 0.078294 0.215300 0.000000 0.000000 0.725650 0.906940 -0.596140 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.442 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.229 0.229 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.121 -0.395 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.442 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.229 0.229 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.121 -0.395 8.23473027 12.50985332 8.13389689 9.95959528 5.32122100 10.81141572 2.63317543 NA 9.00239958 8.14798942 1.04823619 6.04549539 1.63315218 9.64935517 9.38061301 4.59252282 7.13919831 9.96954841 11.04632359 10.57633185 9.54049056 8.28660812 10.31655036 1.92265457 10.25846887 9.69925508 3.16367584 NA 11.00191481 3.63316380 11.96134210 12.54164188 7.01398810 8.56914927 6.86412051 9.43550275 7.10348610 0.46320392 0.04823619 3.78517387 9.37837333 9.05289187 10.39619375 3.55070370 11.36211615 7.08162617 9.67816700 5.58218264 9.55004046 NA 12.41752806 2.16369194 9.08070829 9.82872677 7.77233041 4.59252282 8.17060010 7.26090260 6.62311185 0.78517387 12.90151291 0.04823619 11.44302330 NA 5.63316671 4.16368389 7.91445211 8.96109281 15.553951 7.351984 10.802813 12.796326 9.682409 10.409782 12.411608 14.194905 9.950041 10.644393 13.890128 11.118772 8.927787 7.660457 2.986811 7.662913 11.713539 11.012063 7.857704 9.436938 9.215622 9.699255 9.965854 6.277021 8.602792 11.643927 7.696860 1.633152 7.480049 8.704127 8.885306 9.518523 9.034993 9.632540 10.716497 5.561274 11.394542 10.241729 9.850720 10.223961 9.882674 9.548713 10.422156 9.135666 4.191160 9.099883 6.211433 10.751819 10.262927 10.971746 8.955094 8.128701 13.481963 10.615209 9.553353 12.940746 10.658921 9.672694 2.463230 TCGA-3C-AALI 50 0 NA 4005 breast stage iib t2 n1a m0 female 2003 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 2 2 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1831247 8.9883572 11.4134001 8.4202866 9.4519953 9.4564688 9.9821654 10.2111910 10.7251684 13.7629045 10.4944875 10.4868541 4.2085407 17.5703360 3.9284367 9.5325895 3.9284367 8.7540738 6.1654718 12.5625962 -0.8788519 12.8606482 2.9284272 10.2064447 11.3241206 9.9146819 4.4786289 9.3462859 11.3728568 0.7060221 7.2348203 5.8215189 -0.8788519 5.0037237 9.7917348 9.8023170 9.1069204 10.3158354 9.1586256 11.3396418 1.7060221 8.8370406 14.7315267 7.9065311 9.6861806 10.4231462 10.1274046 5.7357875 4.4430098 8.3305320 10.6470886 NA 10.1118916 4.5133960 6.3498978 5.0518158 9.5629851 11.1922056 9.9171181 11.1733069 12.4408917 7.1817744 9.6679730 9.1792055 10.6568399 10.6866567 3.8215163 11.4578640 8.9821654 -0.8788519 11.1551897 8.8759662 4.5158007 4.9284319 8.6947256 8.9775040 10.4435701 9.3749260 1.9284272 8.1210786 11.8355387 11.0698108 9.6890346 9.3808219 -0.44005000 0.38718000 0.38584000 0.44376000 0.47650000 -0.43648000 0.02258500 -0.00871460 -0.49009000 0.44732000 0.44732000 0.46502000 -0.47420000 -0.46078000 0.00722170 0.00722170 0.00722170 -0.00664320 -0.00027724 -0.42630000 0.50030000 -0.01615400 -0.53053000 3.65690000 2.30880000 -0.15431000 0.09638000 0.09638000 0.78331000 -0.51775000 -0.44005000 0.00000000 -0.47649000 -0.43648000 0.05480300 0.48199000 -0.44070000 -0.49514000 -0.43518000 -0.45292000 0.44935000 0.45412000 0.44732000 -0.44372000 -0.46172000 0.00513590 0.38452000 -0.46078000 -0.46208000 -0.02395100 0.00722170 -0.02648000 -0.96265000 -0.00664320 -0.00027724 -0.00027724 -0.41223000 -0.01450300 -0.46218000 0.03157700 -0.52483000 -0.53449000 -0.93873000 -0.15431000 0.09638000 0.83019000 -0.43246000 -0.49057000 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 0.310 -0.469 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 0.310 -0.469 8.9806134 13.4495431 4.4430098 9.5917374 6.0868623 11.2075465 5.0983564 NA 9.3808219 7.9348597 NA 7.7685370 2.9284272 10.8219516 9.4156993 6.6524607 7.6679730 9.4463840 12.0075372 12.6694188 9.7401614 6.9728270 11.0283447 2.8215266 7.9316500 10.1565650 2.7060442 NA 13.3016093 1.9284272 11.2878693 12.0062029 7.4742251 8.5557069 8.4339613 10.5462944 6.5304688 5.4430065 1.7060221 2.5805073 8.9991293 10.0488564 11.8834606 1.7060221 8.3040935 8.4653746 10.0082992 5.3305333 10.0846972 -0.8788519 9.0796312 3.8759668 4.2085407 9.1191048 7.8008753 6.6288727 9.3059539 7.7649346 8.8075790 2.2910141 13.0270296 0.7060221 11.3105943 NA 8.2111909 4.6756692 7.0037214 7.8005589 11.875329 7.831885 8.024960 17.570336 9.419141 10.324427 12.562596 10.040687 9.292468 9.879302 13.183799 7.465375 8.330532 8.709793 4.406482 8.536820 10.824117 11.354998 5.387866 7.941258 8.483022 8.606908 10.614449 7.789963 8.340247 10.494488 7.270826 1.121082 8.431691 9.243363 10.008299 11.200897 6.504782 10.934459 8.574349 6.869272 12.045618 9.106920 10.243907 10.923191 10.959889 9.740382 11.052555 7.483022 3.369006 8.876951 7.842177 10.111892 6.882630 11.847297 9.562985 7.354698 12.622667 10.007537 10.137190 12.068167 11.257749 10.408214 2.291014 TCGA-3C-AALJ 62 0 NA 1302 breast stage iib t2 n1a m0 female 2011 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1939575 8.9618551 11.5987696 8.1485859 8.6819345 9.2117141 10.1416555 10.1984172 9.8543344 13.1024850 9.7212047 10.2401101 1.4435536 13.4344609 3.1804980 9.3403667 6.3663624 8.4472820 9.5274522 12.1737168 -0.1414619 13.3237510 NA 9.7212047 11.3378422 7.5167787 -0.1414619 11.5247912 9.6000342 2.4435271 7.1984175 6.3821294 NA 5.3821277 9.0557840 9.3918970 8.6432021 10.1804953 9.9233100 10.3373368 -0.1414619 9.4566197 14.6147586 10.4944939 10.0861832 10.0545545 9.9273455 5.7412108 6.5024229 7.7594342 9.9697029 NA 10.5301083 5.8358483 6.3504195 5.0680215 9.6529831 11.8465417 10.2336066 12.5873381 12.3554210 8.4695922 10.6651168 10.0655815 10.0032254 10.4528918 4.0284896 11.3190231 11.6550124 0.8585381 10.3977261 8.1759796 3.4435271 5.6399267 10.3322729 9.9260016 10.8308291 10.5398056 1.4435536 3.7654605 11.2621119 11.1300303 10.4668220 9.5380473 -0.3235600 0.0833420 0.4121200 0.0000000 -0.1447700 -0.3166900 0.0126550 1.1985000 0.0375000 3.6569000 -0.7089000 1.1520000 0.0342540 0.0587950 0.0146090 -0.3206500 -0.3206500 0.0228650 0.3785800 -0.3161100 1.6240000 -0.3273900 -0.6557500 1.0898000 1.4188000 -0.3218600 0.0052749 0.0052749 3.6569000 -0.3235600 0.0380650 -0.3907300 0.0000000 -0.3264600 -0.3308700 0.0249690 0.0249690 -0.1379400 -1.0618000 0.0314360 0.2113100 -0.0027707 1.3732000 0.0336900 0.0277780 0.3851800 0.4294000 0.0096623 0.8211800 0.0146090 -0.3206500 -0.3206500 0.0478360 0.0248290 0.3733100 0.3706800 0.0238470 -0.6980900 -0.3273900 0.0084743 -0.6944100 -0.6702100 0.1713600 -0.3151700 0.0052749 0.0199230 -0.3308700 -0.6923500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.315 0.000 0.097 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.343 -0.343 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.315 0.000 0.097 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.343 -0.343 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 0.000 8.9433755 13.5994020 5.2161211 10.4284228 4.0284896 11.5611728 3.7654605 NA 9.1159550 7.5024237 NA 7.8069343 2.1804980 10.4303199 9.5345243 5.2161211 8.5659265 9.3118378 8.2117141 10.5042256 9.2579733 7.6914574 11.6655195 1.8585778 7.6914574 9.9500026 2.4435271 -0.1414619 10.6667269 2.6659157 13.0406511 12.4454070 7.1714500 9.6835259 7.6659221 10.4397678 3.9460290 2.6659157 -0.1414619 4.3179986 8.9002265 10.1253538 9.0655815 4.5590084 11.1792888 8.6626983 9.6707446 5.1804940 9.4284228 -0.1414619 8.8156692 4.0284896 5.3504195 9.7015303 7.0055684 5.9246558 9.5398056 8.5060255 7.9353825 1.8585778 13.8135813 1.4435536 11.0987623 NA 8.5024233 4.9029611 7.1804950 8.7503509 13.214481 7.480619 8.620118 13.434461 9.950003 10.239028 12.173717 12.180495 8.678746 9.795205 12.481534 10.246584 7.759434 7.940716 3.028498 7.606760 11.540245 11.6155404 6.0483910 8.4359961 9.3860442 7.6464694 10.5576537 7.5520542 9.6961952 9.7212047 7.8185694 NA 9.2050809 9.1475486 10.1124147 10.7149928 7.8697943 10.7343166 8.2764199 6.4284222 10.9852200 8.6432021 9.9029613 9.9749111 10.3574164 9.6250962 11.1537622 7.9981188 -0.1414619 9.6847662 7.2422719 10.5301083 7.9192632 12.1546230 9.6529831 7.3982691 13.8556585 10.1183105 9.7579241 11.6533892 11.0728863 10.3220916 2.8585580 TCGA-3C-AALK 52 0 NA 1221 breast stage ia t1c n0 (i+) m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 2 NA NA 1 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6336731 9.2937880 11.7590005 8.3832075 9.3588690 8.6867845 10.8244855 9.8790673 11.1951520 13.2535263 11.4943463 10.1153380 3.9362327 15.1366209 2.6336637 9.8515501 6.6692975 8.2365577 8.5675603 12.8439386 2.5341363 13.0969931 2.6336637 9.8219619 10.8202001 5.9841701 -1.2733431 8.9423154 9.8155708 0.7267440 8.4202693 7.4444592 -0.2731688 5.2503439 9.2226375 10.0288502 8.5195730 11.6189458 9.6567806 10.8002547 6.0931038 11.5103947 15.1972825 9.2675402 10.7044202 10.2875930 10.1034506 5.1018223 7.2105983 8.3488344 11.3180711 -0.2731688 10.8743055 6.7211361 5.3849926 4.5596754 9.9657843 11.8688896 10.2971126 12.8847610 12.6568730 7.8967078 10.7918620 10.2678792 10.9838757 10.9066916 4.0487070 12.4143769 12.3042114 NA 10.6002266 8.5533309 4.1865402 4.4547023 10.4699339 10.2828095 11.1761892 8.9239992 3.6336753 9.9711463 14.0978445 11.9350169 9.7962322 10.0848842 -0.0232920 0.5887300 0.6170400 -0.0161540 -0.0576540 -0.0326590 0.0231450 0.0133530 0.0133530 0.0263730 0.0263730 0.0263730 0.0141900 0.0141900 0.0178620 0.0232860 0.0232860 -0.0021507 0.0000000 -0.0195890 -0.0153290 0.0252780 -0.6439600 2.9314000 1.6935000 -0.0311090 0.0092120 -0.0143660 0.0315770 -0.0232920 -0.0232920 -0.0069195 -0.0576540 -0.0246610 -0.0286280 0.0192230 0.0188030 0.0133530 0.0133530 0.0133530 0.0114000 0.0141900 0.0263730 -0.0221950 -0.0221950 -0.0221950 -0.0221950 0.0141900 0.0141900 0.0178620 0.0232860 -0.1721500 -0.1721500 -0.0021507 0.0000000 0.0000000 -0.0195890 -0.0153290 0.0252780 -0.6359000 -0.6439600 -0.6405700 -0.0121050 -0.0168410 -0.0314010 0.0315770 -0.0526660 0.0195030 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2688470 14.0632891 6.5533313 10.4193980 3.9362327 11.5433663 2.8966981 -1.2733431 8.6911234 8.3004299 NA 7.6983261 3.5847581 10.4512963 9.5963763 2.9747128 8.8560657 9.0328442 11.3874470 11.7501904 9.6831152 7.1738660 10.7584837 1.9424582 9.8967075 10.6280265 5.0843364 NA 11.4538521 2.9747128 12.7027200 12.3124493 7.8353070 9.5932888 8.4045021 9.8567095 4.0843364 0.7267440 1.3117356 9.3588690 8.9252274 10.4530007 9.3715401 4.0487070 9.3847352 7.2385356 9.7232560 5.7267822 10.6604732 NA 10.7090631 3.8560694 4.2186339 9.3311041 7.1448040 5.9066910 9.0799293 7.7874782 10.1948974 0.7267440 13.9422018 -0.2731688 10.2581640 NA 9.2414965 5.7267822 7.6838845 8.7040624 14.305186 5.468251 8.258164 15.136621 10.101654 10.396996 12.843939 12.010450 8.918496 10.001161 13.075856 10.457253 8.348834 9.559672 0.726744 7.660473 10.845075 11.390563 6.384994 8.551741 8.984170 7.210598 10.206229 6.993569 6.771176 11.494346 8.453001 4.974708 8.496621 7.105597 11.855260 10.411531 7.923631 9.764329 10.629158 6.615525 11.957912 8.519573 10.415033 10.440599 10.586317 10.019104 10.489580 8.559673 NA 9.861055 7.182109 10.874305 8.171797 11.016225 9.965784 7.182109 13.901474 10.147795 9.938671 12.073158 11.697787 9.394781 1.726788 TCGA-4H-AAAK 50 0 NA 348 breast stage iiia t2 n2a m0 female 2013 NA no infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9822655 9.4388804 11.6777946 8.7446193 8.6936354 7.9792274 10.7403190 9.5462378 10.9648631 9.3228869 10.9294158 10.3546480 1.3523066 13.5789146 2.4677751 10.4630026 7.3409868 8.2390147 9.7848437 12.7312288 2.0892608 13.7801820 5.0152656 9.4406659 10.6453901 3.5746949 NA 10.0399166 9.3848066 2.9372691 8.7813597 6.9816586 NA 3.3523066 9.7917864 9.7510454 9.0469499 10.7120513 9.8421496 10.9484915 3.2267705 10.9907376 15.1329099 8.5451205 10.2982332 10.7715597 11.0985361 5.3966972 0.3523066 8.6802287 11.0841864 0.7673158 10.7645188 7.1596564 5.8226205 5.0711191 9.9062510 11.8859560 10.3718925 12.6074287 12.7028726 8.2102827 10.9837820 10.4534020 10.6373186 10.9256334 4.3820516 12.6223050 12.3700381 -1.2327690 10.3113377 8.8048861 3.6283070 5.1767297 10.5355235 10.1628734 10.7043451 9.1618020 2.7673370 9.6682060 13.4409244 12.7295123 10.0960142 9.9170863 0.0000000 0.0000000 0.0000000 0.0044056 -0.0028728 -0.0039524 0.0338310 -0.0193140 -0.0102320 0.0171240 0.0171240 0.9727500 0.0085432 0.0207420 0.0016590 0.0016590 0.0120970 -0.3437700 -0.0149160 0.0232860 0.0356650 0.1049700 0.2889700 0.2889700 0.2889700 1.1270000 0.2951700 0.2951700 0.0287630 0.0000000 0.0000000 0.0428740 0.0088920 0.0160060 -0.0056757 -0.6381200 0.0209930 -0.0193140 -0.0150250 -0.0102320 -0.0036011 -0.0036011 -0.6626300 0.3251100 0.3251100 0.3251100 0.3259200 0.0207420 0.0372170 0.0137720 0.0016590 -0.6520200 -0.6520200 -0.3437700 -0.0149160 -0.0149160 0.0048459 0.0356650 0.0072217 -0.6683600 -0.6687300 0.2889700 0.0133530 -0.7005500 0.2951700 0.0303100 -0.0135400 0.0127950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 0.000 9.9943534 14.3185668 9.0093223 10.6553214 1.5434464 11.0358813 1.9372691 0.3523066 8.5938878 9.5088062 NA 7.3273281 3.4677751 9.7171659 10.3742070 2.9372691 8.5054317 8.9068906 11.5871192 10.3751319 9.1707240 7.8494883 10.7542478 2.9372691 9.6824716 10.4242110 3.6742346 NA 10.9761832 2.3523066 12.4917465 12.1237912 7.6002296 9.8823829 9.5544256 9.9139080 6.0982553 0.3523066 1.3523066 2.8547936 10.6610199 9.5045866 9.5404785 4.1248905 8.2207541 7.7069187 9.9651703 4.5222253 9.8620768 NA 11.6678287 3.3523066 4.0152656 9.4754145 4.9911499 4.8334265 9.3228869 8.1830810 6.7331238 -1.2327690 13.7927816 0.7673158 10.2149391 -1.2327690 8.2144226 4.9170880 7.5907068 9.1038459 13.1975539 5.8226205 8.2410450 13.5789146 10.3705019 10.0773839 12.7312288 11.7606315 8.9596319 10.1920304 12.9052910 12.0145250 8.6802287 9.5544256 0.7673158 7.3560540 10.6940058 11.491213 6.721535 8.566621 9.162873 8.553609 10.881296 7.286975 5.275134 10.929416 8.352302 6.865371 8.821265 7.195825 11.419288 10.571470 8.628426 9.304558 10.332441 5.124891 11.247880 9.046950 10.432675 10.376518 11.046369 10.206651 10.657984 8.308436 NA 9.307816 6.080223 10.764519 8.159656 11.071120 9.906251 6.744619 14.117830 10.132021 9.645390 12.899759 11.077668 9.645390 1.574683 TCGA-5L-AAT0 42 0 NA 1477 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 2 3 NA NA 3 4 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.528502 9.193336 11.517575 7.998624 8.675455 9.367431 10.594574 9.491359 10.655656 12.369671 10.617919 10.357144 2.930889 13.200276 1.552377 9.920438 6.944685 8.390311 9.350678 12.616841 NA 14.011185 5.785027 9.156217 10.551240 5.380186 0.230449 12.514249 8.603305 1.230449 8.932613 6.785029 0.230449 3.317897 9.568062 9.593479 9.331102 11.808105 9.528502 10.765229 0.230449 11.561917 14.964938 8.439284 10.664025 10.379552 10.529075 5.587992 2.930889 8.449608 11.406925 -0.769551 10.640891 5.088421 6.037795 5.184637 9.895776 12.044622 10.723795 12.196224 12.545165 9.317903 10.688846 10.514824 10.743180 10.867064 4.037795 11.969165 12.175884 1.552377 10.455647 8.475992 4.088922 5.656705 10.524486 10.053807 10.129041 9.029721 3.137323 9.677523 13.147719 12.374620 9.920438 9.991991 0.0061090 0.5546000 0.5458800 0.0087528 -0.0018014 -0.0154660 -0.0079335 -0.0047079 -0.0047079 -0.0018014 -0.0018014 -0.0018014 0.0047847 0.0047847 0.0000000 0.0000000 0.0000000 -0.5566700 0.0010299 -0.0067813 0.0037465 0.0165650 -0.5483400 0.0195030 0.0195030 0.0308730 0.0308730 0.0408920 0.0220240 0.0061090 0.0061090 0.0016218 -0.5376400 0.0122370 -0.0154660 -0.0079335 -0.0079335 -0.0047079 -0.0047079 -0.0047079 0.0014151 -0.0031008 -0.0018014 0.0037465 0.0037465 0.0037465 0.0176840 0.0047847 0.0144700 0.0000000 0.0000000 0.0079175 0.0079175 -0.5566700 0.0010299 0.0010299 -0.0067813 0.0037465 0.0165650 -0.5509600 -0.5483400 0.0195030 0.0030522 0.0308730 -0.4951700 0.0220240 -0.0097473 0.0245480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7926823 14.4458970 7.6482921 10.6551310 3.4745658 10.5680618 4.4003671 -0.7695510 9.0410116 8.9446854 0.8154115 8.4925346 1.8154115 9.8331387 9.6195333 2.5523771 8.1130826 8.9617587 9.3192280 10.0899746 9.7699185 7.4544416 10.6103597 3.7540002 8.3099247 10.2700444 4.3179046 -0.7695510 10.8579737 4.6227547 13.3900747 12.3839919 7.9853274 9.8570615 8.3045813 9.5193058 3.7540002 0.8154115 NA 3.9853274 9.3192280 10.2576547 9.4688446 4.6567023 8.0552076 7.1130826 9.7792617 4.1846374 9.5216105 -0.7695510 10.7112301 3.3178974 4.0377951 9.6281892 6.3992617 5.1130837 9.8488252 7.6567044 7.5702899 -0.7695510 14.0250587 0.8154115 10.2332549 NA 8.3877869 5.4398924 7.7342652 8.9549535 12.960444 5.656705 8.221962 13.200276 10.282328 10.186090 12.616841 12.366309 9.049022 9.640891 12.832211 10.631319 8.449608 8.592383 0.230449 7.601127 10.700590 11.2378176 6.4688439 8.8488254 8.7773342 7.6271304 10.4377714 8.2965290 6.9853274 10.6179187 7.5019025 4.5523709 8.6650680 6.5331241 10.2843657 10.3311021 7.1552524 9.0458230 9.8634350 7.0821884 11.7387670 9.3311021 10.6467095 10.3435307 10.7608462 9.7262948 10.3467837 8.3389641 -0.7695510 9.8270675 7.1611772 10.6408912 7.1252574 10.8675809 9.8957758 7.0704623 14.3079599 10.4171731 10.2507254 12.4125237 11.3887339 9.9169404 0.8154115 TCGA-5L-AAT1 63 0 NA 1471 breast stage iv t2 n0 m1 female 2010 NA no infiltrating lobular carcinoma 0 white hispanic or latino NA NA 2 4 NA NA 1 4 2 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.049161 8.696387 11.079904 7.363076 8.599683 9.345110 10.137407 9.553488 10.986215 10.775657 11.017180 9.989110 6.716092 13.687056 1.704872 10.004073 7.439574 9.341489 9.791001 12.745668 1.704872 12.714518 4.792330 10.279666 10.260413 7.180598 NA 11.907852 10.134272 1.289834 8.419110 6.599682 -0.295128 4.228426 9.515436 9.476354 9.437880 8.889740 9.906989 10.143657 10.432785 10.193709 14.533100 7.512413 10.697803 10.407903 9.330574 4.459753 5.196717 8.556614 10.643709 -0.295128 10.424254 5.164296 6.446332 6.228426 9.731388 11.592466 10.841215 11.374636 12.477592 8.151948 10.496028 10.176540 10.407903 10.439574 3.704861 11.565952 12.046662 -0.295128 10.477179 8.757433 4.939443 5.587509 10.913099 9.364861 10.042487 9.066808 2.289834 10.174507 12.885396 12.648295 9.487863 9.677845 -0.00152430 0.39894000 0.39894000 0.00013863 0.00013863 -0.00110870 0.00458000 -0.00027724 -0.00027724 0.00000000 0.00000000 0.00000000 0.00263570 0.00263570 -0.00166290 -0.00166290 -0.00166290 -0.00263220 -0.00263220 -0.00193990 0.00152550 0.00499690 0.00513590 0.00513590 0.00513590 0.00000000 0.00000000 -0.00451570 0.00485790 -0.00041585 -0.00152430 -0.00087907 0.00013863 -0.00110870 -0.00110870 -0.61958000 -0.00124730 -0.00027724 -0.00027724 0.00087206 -0.37628000 -0.00290910 0.00000000 0.00097064 0.00097064 0.00097064 0.00097064 0.00263570 0.00263570 -0.00166290 -0.00166290 0.00346870 0.00346870 -0.00263220 -0.00292710 -0.00292710 -0.00429290 -0.00667260 0.00499690 -0.41300000 0.00513590 0.00513590 0.00344130 0.00000000 0.00000000 0.00485790 -0.41366000 0.01153900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.006361 14.618689 5.834147 9.987953 5.002423 10.346916 3.164304 -0.295128 9.190694 9.758791 NA 8.228427 3.874787 10.419969 9.533001 3.164304 8.315890 8.909436 10.258494 10.759469 9.598439 7.139493 10.864105 3.405298 7.813389 10.120606 2.704872 NA 11.077730 2.874797 13.128506 12.283709 8.779006 9.656150 9.601197 9.845695 5.228426 0.704872 1.289834 11.334221 9.357710 10.134272 10.300122 4.512221 7.552611 6.760148 10.565952 5.319575 9.408768 NA 10.240140 3.874787 4.097181 9.424835 6.259453 5.770953 9.551922 9.270919 10.363076 2.026800 13.988460 0.704872 10.355916 NA 8.236246 5.834147 7.823806 9.160192 10.980978 5.026791 8.341489 13.687056 10.389613 10.947443 12.745668 10.654691 8.884774 9.857150 12.985491 10.157106 8.556614 8.911879 NA 7.274720 10.261371 11.123771 6.131128 8.966960 8.724456 6.980990 10.126688 8.629677 7.721673 11.017180 7.556614 0.704872 5.659060 7.150045 11.270443 10.730004 7.787972 9.278512 8.151948 7.693550 11.158094 9.437880 11.017748 10.072279 10.412224 9.641503 10.410497 7.802897 -0.295128 10.390498 7.605731 10.424254 7.156076 11.028483 9.731388 7.122717 14.184077 10.558174 10.750624 12.904537 10.858417 9.611755 0.704872 TCGA-5T-A9QA 52 0 NA 303 breast stage iia t2 nx mx female 2013 NA yes other specify NA black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9291036 8.6079494 9.9429684 7.6423463 8.8674338 8.0450568 9.6252504 9.7222360 11.9663501 14.1664008 10.5279309 10.6199859 -0.9351171 13.5499291 3.1523781 10.6745579 8.0393320 7.5567704 9.9406668 12.9998983 -0.9351171 13.7191059 3.7087721 10.2655403 11.4216445 9.8528200 NA 7.7618849 10.0886718 2.3868385 8.1470665 6.1093125 NA 1.8722772 8.9926954 9.7531678 9.4453785 9.7877250 9.0550215 9.7514180 NA 10.3503197 15.3383124 7.9036174 9.9830353 11.0810293 10.5304839 3.7653544 5.0421978 7.8978073 7.2645899 NA 11.0910951 5.5243490 3.9229019 3.8722772 9.6108473 11.2673475 9.1786596 10.4922304 12.1558569 8.9025455 10.7588400 10.8372816 9.1825605 9.9360526 3.3868523 11.5225549 11.9555618 NA 9.5037093 9.0761449 5.0202755 4.1523781 11.2326492 9.5776579 10.9706806 9.0307019 1.3868661 6.5078612 11.2553595 12.0624498 9.4475416 8.4464605 0.3879900 1.2389000 1.4936000 0.0000000 0.0220170 0.0306730 0.0185500 0.5257200 -0.5617700 3.6569000 2.4540000 0.5634600 0.5157600 0.5323800 0.4818100 3.6569000 3.6158000 -0.0037463 -0.0037463 0.0041564 -0.0179480 -0.0533480 0.2780700 0.2780700 0.3336600 -0.1221300 -0.1221300 -0.1221300 0.4554700 -0.6465000 -0.5702200 0.4893900 0.0000000 0.0306730 0.0428240 0.0185500 0.0185500 0.5257200 -0.5617700 -0.5730900 -0.4587200 -0.4731100 -0.6024500 -0.0143720 -0.0143720 -0.0143720 -0.0556510 0.5323800 -0.6409200 0.4652100 -0.6302700 -0.5806800 -0.5806800 -0.0037463 -0.0037463 -0.0037463 0.0041564 -0.0179480 -0.0400800 -0.0491610 0.2965900 0.2780700 -0.0276780 -0.1221300 -0.1221300 -0.6713200 0.0315700 0.9053000 -0.044 -0.560 -0.113 -0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.905 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 0.000 -0.044 -0.560 -0.113 -0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.905 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 0.000 6.07614432 10.41253883 1.87227718 6.73734335 2.68079693 10.62525030 0.64984535 NA 8.82978900 8.64611800 NA 4.76535970 -0.93511715 10.35378354 9.72312899 1.38686612 2.76536501 8.76709031 9.09282346 11.58234082 9.35643348 7.04791132 9.81311034 NA 9.91119137 10.46792951 1.38686612 NA 11.34655778 3.97181023 12.06139097 12.04344919 5.23484233 8.78601668 7.89464014 10.14773178 3.70877214 -0.93511715 -0.93511715 5.42246850 9.39134693 9.66668825 10.89226017 -0.93511715 7.46015197 7.46152201 11.05643931 7.29853735 10.47483876 NA 8.42905225 1.64989133 11.08555027 9.50087932 7.46976065 NA 6.97780653 5.60407726 8.77916285 NA 13.58461515 0.06488285 11.02528147 NA 5.89780674 3.97181023 7.35031955 9.66297006 14.779641 7.076144 8.452935 13.549929 10.106577 11.494586 12.999898 10.904515 10.915030 9.926004 12.206546 10.655505 7.897807 8.186451 1.386866 8.155030 11.160974 10.6395110 5.2146649 7.8164615 7.7514182 8.9166665 9.4954431 4.7928397 9.3234836 10.5279309 5.3686985 NA 7.2298244 8.6335765 10.0256434 7.2645899 6.7451714 10.0429128 8.6685439 NA 10.9004153 9.4453785 10.3234836 9.9221210 8.6869693 9.3514753 10.4008660 7.2197358 5.1093104 8.8312642 -0.9351171 11.0910951 5.1310050 10.4405000 9.6108473 7.7962363 12.9346077 9.9657843 9.7696856 12.7662239 10.6089159 9.9875019 0.6498454 TCGA-A1-A0SB 70 0 NA 259 breast stage i t1c n0 m0 female 2008 NA NA other specify 0 white not hispanic or latino NA NA 2 5 NA NA 2 5 2 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.040392e-07 11.4308034 11.0829229 12.2326320 10.1326911 8.0044211 9.0418957 10.2349260 10.5042388 10.8243759 14.5225253 9.9724307 10.8407703 3.0975265 12.7124338 3.7075800 8.3770799 7.2246423 9.5885394 12.9979205 9.0651358 0.8495990 9.2322269 8.9568199 9.3405640 10.8421871 1.6569539 -1.1504010 9.5544402 9.8524178 6.9788855 8.3534287 10.3449582 NA 1.8495990 9.9607384 9.6895939 9.9542015 11.5398191 10.3682560 12.0874103 0.4345615 9.5325973 15.3655798 8.7181630 9.7832934 11.7166884 11.8900638 5.3573972 NA 9.0639219 13.9541606 NA 11.3044161 8.2863143 3.3731610 2.7564896 10.4984098 12.6031330 10.3449582 12.0302890 13.0017292 6.7013522 11.3344257 11.4878486 11.0440518 12.7050553 5.2419202 11.5347896 11.2085287 -0.1504010 9.9344112 9.5299622 4.8054266 3.1715271 12.1136055 10.4204072 10.4766806 9.5343513 8.2049540 10.9317518 13.5870614 11.9397152 10.6379133 10.4970612 0.00208050 0.00208050 0.00208050 0.00000000 0.00000000 -0.00069303 -0.00857080 -0.00041585 -0.00041585 0.00208050 0.00208050 0.00208050 -0.00138580 -0.00138580 0.00083195 0.00083195 0.00083195 -0.00152430 -0.00152430 -0.00553750 -0.00013862 0.00180300 -0.00180140 -0.00180140 -0.00058454 0.00541390 0.00541390 0.00541390 -0.00207840 0.00208050 0.00208050 -0.00101780 0.00000000 -0.00069303 -0.00069303 0.00083195 0.00083195 -0.00041585 -0.00041585 -0.01161100 0.00555290 0.00297270 0.00208050 -0.00767380 -0.00767380 0.00180300 -0.00016270 -0.00138580 -0.00518150 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00152430 0.00013863 0.00013863 0.00013863 -0.00013862 -0.00512270 0.00194180 -0.00180140 0.00152550 -0.00055444 0.00541390 0.00541390 -0.00207840 0.00055459 0.01628600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.5325975 12.1466623 1.6569539 10.4336257 4.9156930 11.5470048 0.8495990 0.8495990 8.6456426 11.3324108 -0.1504010 8.6997897 4.0195240 9.6689835 9.6119849 2.4345615 7.2027498 10.0126234 8.7684659 9.1905655 9.5580745 7.7594961 10.3697304 2.7564896 10.5804974 11.0978269 3.0195240 -1.1504010 10.0232799 8.9397153 13.7644083 12.7848599 7.4041913 9.9257504 7.6375052 9.2600541 5.8382887 -1.1504010 1.6569539 7.1396220 9.0381917 9.0468195 6.7744155 5.7684649 8.3410553 5.3887613 10.2811004 7.6601742 10.1193139 1.8495990 13.9121549 0.8495990 5.6309616 9.5822705 6.0429813 0.8495990 8.2202903 10.9430204 1.1715271 0.4345615 14.9053301 -1.1504010 10.7587458 NA 10.1550946 5.2758675 8.0044211 8.6011468 13.581344 5.838289 8.390699 12.712434 10.478048 10.337443 9.065136 11.898260 9.334013 11.389731 13.995694 12.920395 9.063922 7.125728 2.550039 7.973724 11.061491 11.6375054 7.3293829 9.1140455 9.8747424 8.5430898 10.8461257 5.2071549 5.0195285 9.9724307 5.9264194 5.4934584 7.8691934 7.7670641 15.2448357 10.5560989 8.6633841 8.3573976 10.3314022 1.1715271 10.6438481 9.9542015 10.0897979 10.0886046 12.0137241 11.8103288 11.2650805 9.6334196 -1.1504010 8.8191333 5.0784220 11.3044161 10.5659936 11.0425120 10.4984098 8.2397718 15.5657658 9.7444206 10.3419567 12.7334870 11.0886045 10.0523389 0.4345615 TCGA-A1-A0SD 59 0 NA 437 breast stage iia t2 n0 m0 female 2005 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA NA NA 3 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.26600069 10.12993067 11.52096959 9.72211624 8.59396286 7.97589095 9.81617888 9.66211540 9.87733675 13.67880768 11.99589442 10.59427169 -0.01086099 13.66472714 4.01884779 10.09151406 6.59889516 8.94717023 9.26367319 12.98698596 2.21147951 13.66432281 5.27450395 9.11153190 10.85173819 7.55642328 -0.01086099 9.38713202 10.04483519 1.40414017 8.34958201 8.16402646 0.72604646 5.07656337 10.16444250 10.24255440 9.81087476 10.48128784 10.34298279 11.74579615 5.61359059 9.56085345 14.74527489 8.87596585 9.87377506 11.23207640 11.68055358 4.79645759 3.65206194 9.40835883 11.23445545 -0.01086099 10.87327138 5.80501896 5.73505637 4.28678506 10.29706058 11.66902070 10.35687954 12.06246141 12.87002354 8.24805944 10.66887417 10.25688246 11.37765634 11.02367057 5.09063752 11.49689546 12.21962171 0.72604646 10.44545525 8.69990728 3.61397948 5.00405188 10.32560734 9.55197928 10.13035652 9.88088461 5.01884779 7.82620334 12.94244855 11.67209544 9.95632707 9.46348289 1.3198000 1.2241000 0.1048200 -0.0018014 -0.0115610 -0.0065050 0.0000000 0.0255310 0.0255310 -0.0047079 -0.0047079 0.4166400 0.1030700 0.5245000 0.0086135 0.6068400 0.5140300 0.0000000 0.0000000 -0.5320500 0.0130740 0.5252000 -0.5152700 0.0255060 0.0255060 -0.4947500 0.0384890 0.0384890 0.5517700 -0.5208200 -0.4360400 -0.0096806 -0.0018014 -0.0065050 -0.0065050 0.0000000 0.0000000 0.0255310 0.0255310 0.0255310 0.0000000 0.0000000 0.0160060 -0.5564700 1.3893000 0.0088920 0.0088920 -0.0058140 0.0115390 0.0086135 -0.5210200 -0.5415600 -0.5426200 0.0000000 0.0000000 0.0000000 -0.5320500 0.0130740 0.0056919 -0.5628500 -0.5152700 0.0255060 -0.5195500 -0.4947500 0.0384890 0.5306200 0.0132130 -0.5176400 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 0.000 8.60135519 13.21806980 7.96255886 10.25393433 2.37406572 11.03075996 1.57405305 2.49159659 8.52178140 8.35978821 -1.59596886 8.78020936 3.40414017 9.97873191 9.00219084 1.40414017 9.01884806 10.25588732 9.66034698 9.97589095 9.76113498 7.99472566 11.58560124 2.21147951 8.78784250 9.73897028 4.94329781 -1.59596886 10.62934578 2.86356187 12.26880815 11.58358095 8.40835862 10.45806420 10.24412939 9.17149508 5.68953959 2.40414017 -0.01086099 2.49159659 7.97399405 8.67560143 10.31253097 5.11838465 8.26871135 8.07479441 9.90298749 6.76608228 9.75673360 NA 10.85895169 2.31103803 7.74621332 9.76732043 4.91573122 4.94329781 9.78514052 8.44305750 6.71247748 0.72604646 13.62979767 0.98906633 10.27411766 NA 7.98345425 6.40413846 8.04979683 8.99752952 14.2534946 5.1183846 8.1904079 13.6647271 9.7495437 10.1269459 12.9869860 13.1980464 9.5507070 10.9647100 14.2135799 11.1104185 9.4083588 8.6160268 0.9890663 7.5100465 12.2293953 11.298956 6.757285 9.086255 9.311029 8.094136 10.702401 6.364140 8.132059 11.995894 7.155682 1.726046 6.346652 6.817935 12.035656 10.328209 9.023441 8.995661 12.200482 6.298957 11.961001 9.810875 10.526643 9.321510 11.600894 10.097625 10.750652 9.004051 2.863562 8.875560 6.464835 10.873271 7.118384 10.692047 10.297061 6.883919 13.084992 9.731691 9.960165 13.182678 9.764437 9.834068 2.652073 TCGA-A1-A0SE 56 0 NA 1321 breast stage i t1c n0 (i-) m0 female 2005 NA NA mixed histology (please specify) 0 white not hispanic or latino 2 2 3 3 NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 10.3759472 10.1925616 12.0953352 9.8011315 8.3434283 9.1489026 10.1597344 9.4666430 10.0658500 13.3515816 11.1793155 10.7074188 2.3965157 13.1847305 3.2545033 9.4140264 8.3019091 8.4892792 9.5187029 12.9276598 2.7184603 13.6396216 7.0511578 9.2456535 11.0757822 8.2451448 -0.6034021 8.6023151 9.9968995 3.3965157 8.3738017 7.8415367 1.3965431 4.3507165 9.9987570 10.3426973 9.8898772 11.3746962 9.5212895 11.3982821 4.7184493 10.7416500 15.0980722 8.5540838 9.9824235 11.2376932 11.4161127 5.3852067 3.3965157 9.2095014 12.0945755 NA 10.8482483 8.4653003 5.2420117 4.3034155 10.2046818 11.9391912 10.4206228 12.6831520 12.8177979 8.8903774 11.1958037 10.8607537 11.6876927 11.3745174 5.0830218 12.3161302 12.1662566 -1.6034021 10.3919359 9.4679843 3.5262191 4.4839834 10.4793364 9.9982928 10.2447537 10.1223142 3.8559498 9.8539029 12.5734743 11.6727918 10.5770528 9.7612038 0.84415000 0.87249000 0.87249000 0.00813220 0.01153900 -0.00995650 0.00833510 0.00249690 -0.47628000 0.30263000 0.30263000 0.30362000 0.81298000 -0.06630600 0.00344410 1.52200000 0.02651400 0.00555290 0.00555290 -0.25414000 -0.00069303 -0.00705760 -0.50038000 -0.00802440 -0.00802440 -0.01216200 -0.01216200 -0.01216200 -0.02055700 -0.06007600 -0.04698900 0.00332990 0.01153900 -0.00995650 -0.00995650 0.00833510 0.00833510 0.00249690 -0.47628000 -0.49434000 0.00000000 0.00291330 0.30263000 0.00069327 0.00069327 0.00069327 0.00069327 -0.06630600 -0.06630600 0.01544700 -0.39897000 -0.48134000 -0.48134000 0.00555290 0.00402430 -0.49193000 -0.25467000 -0.00069303 -0.00705760 -0.53077000 -0.50038000 -0.00802440 -0.01326400 -0.01216200 -0.01216200 -0.00152430 -0.00235530 -0.05684600 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 0.000 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 0.000 8.8467023 13.3283214 10.4659718 10.1909379 3.8559498 10.9763094 0.3964883 1.5664255 8.7105389 9.0331466 0.3964883 8.0411176 2.6444562 10.1367245 9.0926203 1.8559498 8.7650285 9.3965219 10.4961986 10.4084481 9.6023214 7.5386289 10.4929078 2.4839834 10.2848847 10.1647063 4.7184493 NA 10.5443629 2.9200836 12.8928765 12.3579717 7.9701692 9.5076577 7.0760021 9.3094113 7.2699663 -0.0185857 -0.0185857 6.9279036 8.3375697 8.8712421 10.1447148 4.8227862 8.0875504 6.5813980 9.6691519 6.4021457 9.7952656 NA 11.3711158 2.7888319 4.7888371 9.7897193 6.8751301 4.9663797 9.0556260 7.4971844 7.4271888 -0.6034021 14.2498803 0.9814874 10.1597344 -1.6034021 7.2791648 5.5664468 7.6888434 8.7025838 13.707647 5.177882 8.427189 13.184731 10.006163 10.932040 12.927660 12.768435 9.261482 10.930338 12.949551 11.069831 9.209501 9.237300 -1.603402 7.181157 11.179520 11.461770 7.047573 8.673809 8.576431 8.888375 10.559329 6.011232 6.814375 11.179316 6.620523 7.245145 6.826974 6.653815 11.601246 10.126992 9.054733 8.465300 12.530387 5.440916 10.028336 9.889877 10.243188 9.475340 10.895870 9.839984 10.898359 8.988044 NA 8.853020 6.424428 10.848248 7.390876 10.452143 10.204682 7.421662 14.411915 10.178291 9.861578 12.874976 10.739152 9.612055 1.396543 TCGA-A1-A0SF 54 0 NA 1463 breast stage iia t2 n0 m0 female 2006 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 3 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.080784e-07 9.531930 9.135694 11.832664 8.346898 8.674888 9.211671 10.669585 9.692175 10.763240 13.982072 10.541499 10.607558 4.268898 12.961608 2.864513 8.725410 6.765727 8.143365 9.756468 12.696371 3.024976 13.575970 4.946969 9.612374 10.583189 4.024967 -1.222970 9.344048 10.466167 3.362007 9.792457 7.173647 -1.222970 4.754321 9.277884 9.899223 9.067061 11.182450 10.037962 11.261865 10.208540 11.138164 14.932137 6.503465 11.350214 10.662739 10.714048 5.635023 4.731238 8.895984 12.320195 NA 11.157504 5.331630 5.659685 3.169364 10.123556 12.112014 10.286818 12.106559 12.459379 7.832325 10.958816 10.268430 10.940692 10.793851 3.864503 11.881641 12.167614 1.946955 10.378349 9.184310 4.173479 6.719557 10.760392 9.962537 10.214794 9.758610 3.420900 10.028525 12.439377 13.159802 9.880986 10.116336 -0.3619300 0.6863400 1.0212000 -0.3705300 -0.0040665 0.0203430 -0.0074720 -0.0049844 -0.0049844 0.3209300 -0.7329300 0.3520200 0.3473000 0.3473000 -0.0074720 -0.0074720 -0.0074720 0.3955300 0.3941300 0.0228650 0.0573680 0.3764400 -0.3851500 -0.0175290 -0.0175290 0.3048900 0.3048900 0.3048900 0.3340900 -0.0154660 -0.3619300 -0.0027707 -0.3705300 0.0203430 0.0203430 -0.0074720 -0.0074720 -0.0049844 -0.0049844 -0.0130290 0.3513700 0.3513700 -0.0032399 -0.0020784 -0.3620400 -0.0047079 -0.0085766 0.3473000 0.3473000 -0.0074720 -0.0074720 -0.0074720 -0.0074720 0.3955300 -0.3755000 -0.3755000 0.0228650 0.0573680 -0.3758300 -0.3706500 -0.3851500 -0.0175290 0.0000000 0.3048900 0.3048900 0.3494100 0.0013868 -0.0186280 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 0.000 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 0.000 9.5485320 11.8331721 7.1736472 10.0076634 4.2146688 11.2150545 2.0989585 0.7770304 9.0106621 8.9779410 -0.2229696 7.4891567 2.7770514 10.0961501 9.4972866 0.7770304 9.3990944 9.7485860 8.9594369 10.9098635 9.4882878 7.2688956 10.1629049 1.1721034 7.9217005 10.3624745 5.3316300 0.3619929 10.4168353 3.1693638 13.5315646 12.7271427 7.5908236 9.9457146 7.4809461 9.8228022 6.4635424 -0.2229696 NA 8.8350341 9.2628717 9.9925754 10.8558604 4.6099322 7.1694460 7.1864332 10.0733851 6.3694996 9.7290556 NA 11.4410452 3.0249756 3.6839322 10.2045334 6.5615461 5.7428254 9.0659086 7.7826667 10.0414850 -1.2229696 14.4999834 2.2364620 10.2813649 -1.2229696 6.3316318 5.5584023 7.8591912 9.0010442 11.891909 6.015446 8.240567 12.961608 10.231856 10.683181 12.696371 12.457292 8.960678 10.374164 12.847750 10.795590 8.895984 8.922975 1.584385 6.991362 10.674132 11.176854 6.737044 8.768564 8.627229 8.080823 10.614256 7.215834 6.391752 10.541499 7.029708 2.477470 6.804948 7.033912 10.305985 10.219468 8.316201 8.272898 10.762529 6.024969 10.649460 9.067061 10.801143 10.148275 10.819386 9.034430 10.710733 9.033251 8.536931 9.219934 7.890785 11.157504 5.966866 10.642389 10.123556 6.946967 14.254864 10.365289 10.525655 12.248464 11.459818 8.985277 2.864513 TCGA-A1-A0SG 61 0 NA 434 breast stage iib t2 n1a m0 female 2006 NA NA other specify 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 9.871489 9.580688 11.843920 9.528898 8.604234 8.890218 10.880608 9.094039 10.204243 13.508943 10.458667 10.649881 4.080675 13.380075 2.696016 10.364105 4.883635 8.005864 10.689104 12.530567 4.080675 13.653594 6.033879 10.113725 11.127390 6.065243 -1.473931 11.088326 10.494750 NA 8.670742 6.670741 -1.473931 4.655369 9.391816 9.646321 9.641777 10.270917 8.270917 11.439534 11.861334 11.359171 14.921952 7.794836 10.095464 11.787591 11.074424 4.570475 3.526081 8.685955 11.854337 NA 10.712507 6.896771 5.857001 4.675833 10.374315 11.341667 10.254854 12.370887 12.702101 7.584075 10.825005 10.344406 10.901123 10.877851 4.829865 12.030033 10.390656 NA 10.378223 9.540104 2.128953 6.526083 10.661151 9.918401 10.173991 10.757904 4.226524 8.950249 12.925428 12.073942 10.107755 9.690362 0.00750000 0.00750000 0.00750000 -0.00733390 -0.00733390 -0.01216200 0.00027728 -0.00553750 -0.00304750 1.23660000 1.23660000 1.22770000 0.00000000 0.00000000 -0.00926660 -0.00926660 -0.00926660 0.01167900 0.01167900 -0.00249380 0.00041593 0.00430210 0.02314500 0.02314500 0.02314500 0.00127160 0.00127160 0.00471900 0.18344000 0.00750000 0.00750000 -0.00221680 -0.00733390 -0.01216200 -0.01216200 -0.59969000 0.01070300 -0.58215000 -0.60119000 -0.01257600 0.00388540 0.00388540 -0.61355000 -0.00048943 -0.00048943 -0.00048943 -0.00048943 0.00000000 0.00000000 -0.00926660 -0.00926660 -0.00926660 -0.00926660 0.01167900 0.01167900 0.01167900 -0.00249380 0.00041593 0.00430210 -0.60680000 0.02314500 0.02314500 -0.00761010 0.00127160 0.00127160 0.18344000 0.01167900 -0.23178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 0.000 8.9977584 13.6980419 8.5373104 9.7710416 5.0461898 10.6897329 5.7740095 -0.4739312 8.0883255 7.3747065 -0.4739312 7.7040509 3.4329728 10.4056665 9.2308515 1.6959938 8.7121975 8.5062227 11.7288193 11.0166834 9.3592422 7.3995275 10.4227940 2.8480169 9.2377501 10.0849823 7.1110459 NA 10.9612326 2.9855186 12.7545262 12.2285806 7.2843068 10.1914192 7.8068538 9.5260833 4.0179397 -0.4739312 -1.4739312 9.3269831 9.8195548 10.0608725 9.6148714 3.5704751 8.2724968 7.9032938 10.6352609 7.1072840 9.7263689 NA 10.5667155 5.1259940 3.1699410 9.5082854 6.7562481 6.2742766 9.1269254 8.3237447 7.1481349 2.2265085 13.5549390 0.5260688 10.1721918 0.1110313 6.3074431 4.9184005 7.4117796 9.5636303 13.5403906 4.2540044 8.7146721 13.3800750 10.1949682 10.3012819 12.5305671 11.7916983 9.0864160 10.7635920 12.6294530 8.7656819 8.6859545 8.3964481 0.5260688 6.8207036 12.2750098 11.1426321 6.1259961 8.5636303 9.7887653 8.3398643 10.8752539 7.6630742 8.9627948 10.4586671 6.7257562 2.9184053 4.6346049 6.0866458 11.3562023 10.5810266 9.6154277 9.1138606 11.3296090 6.1035123 10.3501828 9.6417772 10.4685978 10.2595224 12.0044737 11.1082252 10.6443755 9.4193847 NA 9.6253390 7.9502497 10.7125071 7.5595063 10.3554096 10.3743150 6.9011227 13.3762701 10.2884653 10.3172462 12.5259071 11.2284724 9.3470599 0.1110313 TCGA-A1-A0SH 39 0 NA 1437 breast stage iia t2 n0 (i-) m0 female 2006 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 2 3 1 1 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.184823e-06 6.242351e-07 10.0799839 10.2813875 11.2822246 9.7043576 8.6273956 8.5873181 9.1951278 9.8367422 11.0700817 13.2455163 10.5025833 10.4805073 2.7005951 14.1349731 2.8526181 10.4603089 6.9694729 8.5264476 7.8593553 12.4638179 0.8526381 12.8931038 5.4614172 9.2136224 10.5011460 3.9229970 NA 9.2380397 9.9111416 5.0384757 9.1305935 8.0364923 0.1156992 5.4848761 9.6734259 10.6088313 9.4133235 11.2466425 10.3859384 11.4612331 -0.4693299 9.9068060 15.6609092 8.4172306 10.2079597 11.2037688 11.9528767 5.5306794 2.3380250 9.7516634 11.5377078 0.5306701 11.4239821 6.0384757 6.0463797 5.0384757 10.2371766 11.3504604 10.2755144 13.0527103 12.4685141 8.7081000 11.3863277 11.0094451 11.2086203 10.7634013 4.9057215 12.3991173 11.7542298 -0.4693299 10.4989873 8.9411318 3.1751094 5.7594994 10.2624239 9.9294243 10.3536496 9.9143848 4.2586018 8.6651067 12.7998803 13.2699865 9.7285115 10.0028637 -0.00412660 -0.00412660 0.49286000 0.00805670 0.88666000 -0.01354000 0.02342600 -0.01519100 -0.01519100 -0.01147300 -0.01147300 0.45632000 0.00172090 0.00172090 0.00752330 0.02132300 0.01071700 0.41714000 -0.00129040 -0.00733390 -0.00069303 0.00249690 0.00610900 0.46468000 0.46468000 0.02356600 0.02356600 0.01642500 0.02679500 -0.41234000 -0.00412660 -0.45800000 -0.46812000 0.02848100 -0.01271300 -0.01770900 -0.01770900 -0.01519100 -0.01519100 -0.47860000 0.04911400 0.04911400 -0.01147300 -0.01247500 -0.01247500 0.00861540 0.03101400 0.01307400 0.04131700 0.00752330 0.02132300 -0.45811000 -0.45811000 -0.00129040 -0.00129040 -0.00129040 -0.02841100 -0.00069303 0.00249690 -0.45790000 -0.45319000 0.46468000 0.00583090 0.02356600 0.01642500 0.02679500 -0.02246900 0.07369000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 9.5668542 14.8836895 8.8627170 10.8758085 2.3380250 10.6074961 0.1156992 0.5306701 8.2483569 9.3005184 NA 9.2101606 2.1156326 10.1370858 8.8102911 2.3380250 8.8627170 9.3185830 11.6423053 10.8050587 9.8503866 7.6625374 10.5832486 4.2586018 7.1490663 10.3476641 4.6392032 NA 10.8827240 2.6181447 12.2643315 12.1596956 8.5236188 10.1839735 7.3218433 9.2449261 6.0698396 -1.4691302 -0.4693299 5.5859630 8.1380106 9.2232961 11.4586437 3.8882367 8.2817224 6.2653900 9.6618944 6.7105902 9.8771942 -1.4691302 11.0421861 4.4614172 6.9186975 9.6588295 4.8642852 4.3380321 8.6791570 7.6829651 6.7254372 -1.4691302 13.3171033 0.5306701 10.2988648 NA 7.8548609 5.2855687 8.7205052 9.2110399 12.376367 4.870532 8.944309 14.134973 10.104328 10.638878 12.463818 11.371655 8.889332 11.239980 12.842642 9.379303 9.751663 9.936886 NA 7.347664 10.592389 11.786004 6.038476 8.836742 8.650919 7.727897 10.211356 6.965309 4.834463 10.502583 8.250070 8.698099 6.425498 6.028213 13.202387 10.461418 8.287237 8.165491 11.842996 6.014496 9.736535 9.413323 10.195572 10.001339 10.296795 9.713695 10.701857 9.173635 -1.469130 9.611085 5.700606 11.423982 10.476124 10.404125 10.237177 6.839020 13.762502 9.260301 9.902457 13.205149 10.634952 9.474661 2.990120 TCGA-A1-A0SI 52 0 NA 635 breast stage iib t2 n1a m0 female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 3 NA NA 1 2 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 0 7 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 2 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.612404e-06 1.664627e-06 9.6932080 9.8065928 11.8912920 9.7115541 8.4139790 9.4956456 10.7819675 9.9598280 10.9740397 13.3155488 10.5532920 10.6417849 2.4832354 12.1302266 2.8202811 10.1719521 7.6865250 8.0426690 8.5515956 12.3557950 -0.1796781 12.4394267 6.3645969 9.1935552 11.0508976 5.9006495 0.2353594 9.6276316 10.3549038 3.1895083 8.4867964 8.6244076 NA 5.1422051 10.4411073 9.8249653 8.9691770 11.2066781 10.2384807 11.5865295 0.5572875 10.4472025 15.4384901 8.6580097 9.8319698 11.0041188 10.6117109 4.8791715 NA 9.4532719 13.2679626 -0.1796781 11.5025398 4.9767806 7.3307108 5.9767806 9.2858431 11.6307144 9.6393914 12.3323587 12.8660932 8.3951854 10.6332561 10.1051278 11.6582987 11.4071164 5.2797090 12.1618881 10.1210105 1.2352982 10.3310409 8.7937350 3.2353135 5.4832418 10.7418697 9.6772209 9.7855800 9.4820547 2.5572385 10.0466889 13.1314100 12.3768625 10.3523079 10.0905720 -0.00041585 0.82451000 0.82451000 -0.00166290 0.61770000 -0.32461000 0.00416320 -0.00021622 0.00305220 -0.42855000 0.00069327 0.00069327 0.00221930 0.00221930 0.12712000 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.32554000 0.00263570 -0.32762000 -0.47184000 -0.47184000 -0.01945200 -0.02926800 -0.02926800 -0.02767100 0.42217000 -0.00041585 -0.00041585 0.00000000 -0.00166290 -0.32461000 -0.32461000 0.00416320 0.00416320 -0.00563000 -0.00021622 0.00305220 0.13184000 0.13184000 -0.14361000 0.00388540 0.00388540 0.00388540 0.00388540 0.00221930 0.00221930 0.12712000 0.12712000 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.00221680 -0.33516000 0.00263570 -0.32762000 -0.32913000 -0.47184000 -0.47184000 -0.35860000 -0.02926800 -0.02767100 0.42217000 0.43395000 -0.00769980 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 9.2097287 14.4929230 7.1807575 10.4982899 3.2797090 11.1902374 0.2353594 -0.1796781 8.6404557 8.0808042 NA 7.6852261 5.2125927 10.4374380 9.1391960 3.3227790 9.3221138 9.8089613 9.1194846 10.2521224 9.2653605 7.6276316 10.9174309 2.5572385 9.1734235 10.2779995 2.7588788 -0.7646406 10.4629301 1.5572385 12.3460421 12.5778056 8.6372603 9.9086232 9.6409874 9.1924161 5.8127421 0.8202402 -0.7646406 8.0506976 8.5628667 9.5773888 11.8310378 4.0682065 8.9668284 7.1056791 9.3684563 6.6906420 9.8921859 NA 12.0563905 4.0166746 3.8500193 9.5207395 6.8600726 5.8127421 9.6484131 8.2673598 7.7371513 2.9357615 13.1649887 0.8202402 10.3408954 NA 7.2769730 5.0682022 7.9512760 8.1792941 10.593067 7.276973 7.932281 12.130227 9.712567 11.359920 12.355795 10.778829 9.357495 10.207217 13.519488 8.710034 9.453272 9.101048 -1.764641 7.575164 11.697177 11.586529 7.694746 8.976781 9.005152 8.673472 10.417693 7.504441 5.963234 10.553292 9.691669 4.661579 4.879172 8.055078 10.963872 10.686010 7.831504 9.716609 11.005772 6.816515 10.474650 8.969177 10.358142 10.207217 10.647355 10.237074 10.923346 9.409616 NA 9.797127 6.935754 11.502540 9.094072 10.474614 9.285843 7.866491 12.876576 10.218308 10.584042 12.395973 11.186599 9.370382 2.879176 TCGA-A1-A0SJ 39 0 NA 416 breast stage iiia t3 n1a m0 female 2006 NA NA infiltrating ductal carcinoma 3 black or african american not hispanic or latino 3 2 1 1 2 2 3 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 9.463504 10.074150 11.923071 9.479856 8.500403 8.086337 9.619240 11.101307 9.400868 15.884343 11.513279 11.040721 1.356482 13.185177 4.072680 10.052448 5.797047 8.351635 8.705202 12.638569 NA 13.330581 2.008559 9.213086 10.583918 4.797044 1.549127 10.139238 10.216230 -1.450873 8.278739 8.233867 3.834519 4.503317 10.055922 10.449986 7.554743 12.339773 10.478007 11.089731 NA 10.177564 14.762906 7.542057 9.279589 10.731203 11.963540 4.134081 5.040971 9.606434 11.484468 -1.450873 10.948397 7.582542 5.056913 4.503317 10.851758 11.980877 9.985830 13.289268 12.826842 8.366102 11.060377 10.499463 11.070228 11.376064 4.698869 12.001231 12.528633 2.549127 10.583574 9.137833 1.356482 5.431763 10.087793 10.493099 10.428702 10.661558 4.758570 6.214455 12.105625 12.324935 9.651094 9.378049 -0.021784 0.414120 0.891660 -0.015741 -0.028559 0.389820 0.410270 -0.067467 0.277100 0.443420 0.443420 1.052700 0.456830 -0.505570 -0.043737 0.887060 3.656900 1.370400 3.656900 0.289290 0.052383 -0.063166 -0.540580 0.307610 0.422840 -0.440910 0.410470 0.416640 2.128200 -0.021784 -0.021784 -0.057654 -0.015741 0.404270 0.389820 0.410270 0.400770 -0.134450 0.277100 0.277100 0.422840 -0.050641 0.443420 -0.531000 -0.511770 -0.508050 -0.499550 -0.505290 0.453770 -0.043737 -0.470560 -0.529670 -0.553270 1.318700 -0.501420 -0.503600 -0.199620 0.052383 -0.052531 0.435810 -1.292900 -0.411570 0.425190 -0.440910 0.416640 0.384360 0.440200 -0.504740 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.449 0.449 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 0.112 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.449 0.449 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 0.112 8.3006628 12.7651824 5.8710477 9.2417341 3.7190410 10.4424202 -0.4508730 1.3564819 8.3255519 8.4210238 NA 9.1008268 4.4317633 10.5918040 8.8112135 4.2215446 9.6292699 9.8379847 8.5206623 10.6172252 9.8712721 7.5004037 11.2538869 -0.7025151 9.7773362 9.5624414 3.9066694 NA 10.9449206 3.5491147 12.2025236 12.5869230 8.0044458 11.1073002 7.7165369 9.7573530 5.1037074 1.3564819 -1.4508730 1.3564819 8.4605108 9.6596019 9.8011928 6.2564786 7.2271557 7.5292580 10.1222925 6.6784015 9.7438756 1.5491270 10.0974590 2.8710551 4.5714887 10.0202706 6.6730334 6.8845088 8.6339270 8.4039873 8.1056247 -0.4508730 13.3178716 0.5491270 11.2695767 NA 8.3106700 5.0882773 8.4393829 9.1592207 14.611202 6.532113 9.053938 13.185177 10.073283 11.000587 12.638569 12.068263 11.117350 11.581853 13.133905 10.613525 9.606434 8.941436 2.941444 7.563139 13.765258 10.619240 5.906672 8.726538 8.400868 8.240862 9.852420 5.657643 7.506221 11.513279 7.115173 3.503311 7.185744 8.268627 11.977086 9.597605 8.895633 9.293953 13.036770 5.604401 10.434861 7.554743 9.965388 9.546298 11.827278 9.979048 10.261646 9.223311 -0.450873 8.406991 7.004446 10.948397 5.491632 9.794671 10.851758 6.975384 13.396029 10.376858 10.081962 12.391076 9.816491 8.791102 4.103707 TCGA-A1-A0SK 54 1 967 NA breast stage iia t2 n0 (i-) m0 female 2007 NA NA other specify 0 asian not hispanic or latino 4 3 4 5 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.115464e-06 1.075072e-06 10.41463693 9.64930199 12.16901852 9.64816917 7.61027706 6.94886245 10.36033003 10.71353086 10.37341429 11.46504474 12.78065428 10.93383293 -0.08085064 8.24554463 3.65608444 9.27593382 5.19213497 8.33837316 8.71677660 10.97304087 2.03460311 2.24104694 9.71623609 9.79476188 11.59360154 4.54360724 2.24104694 5.81796854 11.30065794 1.14149819 8.88201112 6.68288085 4.28835118 6.06886210 10.26193048 12.54391044 9.02240277 9.04323622 9.88970031 11.25357452 9.05610606 12.85385015 13.79860251 8.12510346 8.71893626 11.63992924 11.28598357 5.17964242 4.97800796 8.56297122 10.23690442 0.91914936 10.07139988 2.42161380 2.50408643 4.35651712 6.47370413 13.22915965 9.07055436 10.89949258 13.20413180 6.21679629 11.83511881 11.80882175 11.94252283 11.92345251 5.37854630 11.56507356 8.13989613 NA 9.65720732 11.05396911 7.60196908 6.55815434 12.59323368 11.48135743 10.42954954 10.39180584 4.33415348 8.21373561 11.30425839 9.88393707 11.10357711 9.69938141 -0.48838000 0.29079000 -0.28644000 -0.77419000 -0.06839400 -0.30898000 0.16925000 0.18736000 0.10661000 2.91530000 2.12240000 1.65780000 -0.23693000 0.04159100 0.10565000 0.11637000 0.11637000 2.98260000 0.06941200 0.93527000 -0.33272000 0.06207100 -0.27363000 -0.27363000 -0.27866000 0.18206000 0.18206000 0.18206000 0.19237000 0.01320400 -0.46654000 -0.82122000 -0.76536000 -0.30898000 -0.93490000 -0.80402000 -0.80402000 -0.28811000 0.11784000 0.14711000 -0.29958000 0.00000000 -1.25560000 0.14142000 0.14142000 0.14142000 0.15815000 0.00054581 -0.44664000 0.10565000 0.11637000 0.17090000 0.17497000 2.98260000 0.06941200 0.65718000 -1.29290000 -0.33272000 -0.77889000 -0.75720000 -0.26469000 -0.27363000 0.15455000 -0.81170000 0.18206000 -0.81516000 0.09855100 -0.82091000 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 -0.496 1.658 0.141 0.141 -0.125 -0.125 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 -0.496 1.658 0.141 0.141 -0.125 -0.125 5.83399819 12.18140561 5.99948820 9.43152623 4.52397589 12.01484166 0.65608444 0.33411057 9.07308917 6.61492329 6.61955534 9.38468145 5.92660911 11.09819471 9.85231383 6.87718473 5.27666787 11.08548733 7.41630184 7.90400834 8.98561684 8.76565010 11.17000552 -0.08085064 8.97168293 8.97258841 4.08904046 -1.66566056 10.07013155 4.03459430 13.20186559 12.02567791 8.26784335 10.28069330 7.33133171 10.54451939 8.37854674 5.06207421 -0.66588943 8.50658013 9.05610606 8.43875111 6.20451637 8.99325657 9.83670084 7.33977698 10.77502164 5.41096855 9.18979961 -0.66588943 11.60751101 5.54360724 4.58208024 9.69752069 5.58075151 3.61955387 7.69170444 6.22897065 5.17964242 0.91914936 14.19858047 -0.66588943 10.24479515 -1.66566056 10.62992138 7.04839750 8.97168293 8.15273457 8.125364 9.108116 8.210669 8.245545 11.077725 10.053969 10.973041 12.259985 10.057779 13.038705 12.341618 12.317948 8.562971 8.312863 8.803794 8.004809 8.895440 11.5468009 7.3056961 8.4826289 11.3687795 10.1281622 11.5921045 2.5040864 9.7498942 12.7806543 9.7551653 0.9191494 10.2645202 9.7708900 11.3504385 10.5242858 9.1725685 11.0930003 7.6560809 4.3565171 9.7451444 9.0224028 9.9529967 10.0039233 12.3410045 12.6739329 11.2914360 9.9345301 NA 9.5762428 6.1479335 10.0713999 8.1575197 11.9187627 6.4737041 7.7499157 14.5173032 10.3217718 10.6518477 11.7375640 10.8889811 9.7183966 0.6560844 TCGA-A1-A0SM 77 0 NA 242 breast stage iia t2 n0 (i-) m0 male 2007 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 3 1 6 NA NA 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 10.2866190 9.9986509 11.0702904 8.8162080 9.2949805 8.6481760 9.6436284 10.1951858 10.4944061 12.5091677 11.7418351 10.2425667 NA 17.4936734 3.4238874 10.2767413 5.9802836 8.3984739 8.5434421 13.5080736 -1.6633738 13.4146619 6.1373273 10.3930383 10.5038458 3.6583600 -1.6633738 11.5557475 11.5739364 1.7958500 7.5385514 7.9511372 NA 3.4238874 8.8402533 10.8162079 10.4442986 10.1202445 9.8648818 10.8302831 1.3364548 9.5961709 15.1898347 8.1738350 10.0736750 11.2451956 10.5425263 4.5652438 2.5063480 8.8890969 10.8789759 0.6583715 11.4470741 6.1629753 5.3587971 4.1944102 10.7718375 11.4237248 9.8565552 12.4707738 12.5577882 8.7605939 11.2888049 10.5990569 11.2446326 10.0694429 4.0553345 12.1747452 12.9265468 0.3363977 10.3290120 8.8481804 1.3364548 6.3022112 10.0858782 9.9941928 10.7160767 9.5379390 1.7958500 10.3480044 12.9545264 13.6511879 9.5843552 9.9807347 0.4927600 2.3188000 1.0779000 -0.0028453 -0.0028453 0.0075641 0.0120180 -0.0089271 -0.0089271 0.0202670 0.0202670 0.0281240 -0.0060267 -0.0060267 0.5744200 2.4511000 3.6569000 0.0070076 0.0048230 -0.0052189 0.0033938 0.0095298 -0.0101690 3.6569000 1.0355000 -0.0162280 -0.0162280 -0.0162280 0.1003700 -0.5945400 0.4927600 -0.0137520 -0.0028453 0.0075641 0.0075641 0.0120180 0.0000000 -0.0089271 -0.0089271 0.0035327 0.0146740 0.0146740 0.0202670 0.0360120 0.0360120 -0.5562900 -0.5462800 -0.0060267 -0.0060267 0.0159310 -0.0692700 -0.5840700 -0.5792600 0.0070076 0.0048230 0.0048230 -0.0052189 0.0033938 0.0313600 -0.5727400 -0.0014605 -0.5837800 -0.0013220 -0.0162280 -0.0162280 0.1003700 -0.0074084 0.0164900 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 0.000 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 0.000 9.02205261 13.92812531 7.03686704 10.07831589 1.78927019 10.74555341 1.33645479 NA 8.27306544 9.59969679 -0.07856367 8.48108578 4.98028584 10.56824886 9.27600689 2.14378522 6.34765503 9.80606945 12.16822972 11.34240302 8.93193682 6.92138991 10.81342697 4.35879711 8.62644644 10.16773488 -0.07856367 NA 10.71715931 3.69397753 11.76740283 11.78402754 8.14699932 10.32936604 8.28771238 9.35740751 7.57244179 -0.66360234 -1.66337383 5.58435524 8.65157735 10.04076369 10.38729662 2.79585005 8.21751089 6.47085407 10.24819408 6.66285776 10.29715369 NA 10.42786310 4.09131901 5.26716496 9.47749378 6.44086917 2.14378522 8.78660780 6.97667295 8.55438548 4.06434829 13.66461170 0.92136016 9.85458901 NA 8.35740773 5.05067147 8.45925578 9.17089874 15.3876375 6.7373068 8.0455112 17.4936734 9.8362735 10.8599897 13.5080736 11.7267310 11.7565682 10.3429150 14.5481449 8.8121609 8.8890969 10.3560184 0.3363977 7.6171986 12.1648617 10.8119078 7.1502093 9.3889956 8.6264464 7.3998231 9.1283151 7.4159124 4.7114674 11.7418351 6.7710563 3.1437852 8.0745199 6.4153784 11.7256557 9.7141804 7.9138564 9.1685265 11.5099487 4.2906235 11.5115390 10.4442986 9.9293518 9.7705346 10.9400540 9.7674029 9.6862617 8.5113534 NA 9.1941210 4.5458819 11.4470741 9.2523071 9.9363405 10.7718375 6.8794595 14.2399801 9.4624867 9.5932260 12.0979789 11.1322644 8.6367801 0.3363977 TCGA-A1-A0SN 50 0 NA 1196 breast stage iia t1c n1 mx female 2007 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 2 NA NA 1 2 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 9.9887357 10.6421779 11.8470935 9.8198350 7.8612160 9.1225915 10.2374300 10.1358121 9.9754684 13.4663100 11.3493057 10.8637016 4.5492009 17.2223191 3.4886564 9.0983159 6.6813073 8.5343048 9.6132266 12.9639902 1.1667154 13.2356562 2.5292962 9.3074324 10.6821522 6.1209304 1.1667154 10.0162507 10.5255421 3.6813031 8.3193808 7.5809663 -1.6407037 4.9887347 10.6473800 11.2854897 9.6273362 10.9306577 9.3614909 11.0830400 -0.6407037 10.0847453 14.7848573 9.5996219 9.0701596 11.9293533 11.0436894 3.9443431 5.6073066 9.0658752 11.7406516 -0.6407037 10.8763102 5.0736232 7.0282641 5.6447821 10.3269656 12.0412763 10.6258728 11.8496032 12.4067586 7.9120480 11.0108793 10.1459958 10.8033586 11.0864486 4.1142671 11.6230884 9.3373744 -0.6407037 9.7246080 8.9072377 2.6284237 6.3423734 10.9478595 9.5510553 9.6643008 9.4931636 2.3593806 9.3824403 12.4914771 11.8309273 9.7533057 9.3258844 -0.3778800 0.6721500 0.6658600 0.0055529 0.0055529 -0.3738100 0.6886800 0.0018030 -0.3707600 -0.2396400 -0.2396400 0.6428600 -0.3686100 -0.2845300 0.0252500 1.0587000 0.3312400 0.3278500 0.3278500 -0.3721100 0.4163000 0.1698600 0.1622000 3.6569000 3.6569000 -0.0523960 -0.0523960 -0.0523960 3.6569000 -0.3778800 -0.3708700 -0.3276200 0.0055529 -0.3738100 -0.3662400 0.6832800 0.6832800 -0.0056757 -0.3707600 -0.3787600 0.2579300 -0.4109100 -0.2396400 -0.0114730 0.0266540 0.0266540 0.0406090 -0.2845300 -0.2845300 0.0252500 0.0252500 -0.3721100 -0.3721100 0.3278500 0.3278500 0.3278500 -0.3763900 -0.0109480 0.1146200 -0.2378900 -0.4077900 -0.3887300 0.0000000 -0.0523960 -0.0523960 0.2826300 -0.3825700 -0.3863700 -0.220 -0.136 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 0.000 -0.220 -0.136 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 0.000 9.5995741 13.6490018 5.4989306 10.0344540 3.0363275 11.1739615 1.8188097 NA 8.9996241 8.2404932 -1.6407037 7.8791531 3.5688347 10.0287071 9.5405312 0.3594087 8.7484726 9.9048262 10.1333425 9.6545741 9.5019777 7.4835006 10.5364872 2.8829364 8.2989584 9.7119742 1.5293212 NA 10.1950348 1.1667154 11.9960037 12.4623390 8.3062855 9.5430144 7.6378283 9.4037732 5.2901147 1.3593525 -0.6407037 8.2158048 8.6214739 9.9923743 10.6276286 3.2173548 6.8072892 7.4989306 10.2613773 7.0838931 9.2343605 NA 11.2657060 3.6073066 3.1667315 9.7395317 5.4196434 2.7516994 9.0344540 8.6711274 9.2812200 0.6813143 14.1208784 1.3593525 10.6413091 NA 7.7213228 4.5881989 7.9574318 8.9320792 14.457576 6.974089 7.951836 17.222319 9.640150 11.420581 12.963990 12.585716 9.411098 11.189102 13.304960 10.178361 9.065875 8.702565 7.260246 10.724334 12.327326 11.317569 5.890760 8.453457 9.131694 8.847219 11.006408 7.676791 10.369557 11.349306 7.107572 3.166732 7.097472 7.781339 11.009084 10.408887 8.958362 9.573698 12.036879 5.951837 11.084002 9.627336 10.414661 10.275632 10.689456 10.329485 10.952303 9.340233 6.147282 9.375296 4.751694 10.876310 8.282707 10.486838 10.326966 7.546731 13.537266 10.026934 10.043689 12.012672 10.938223 9.273764 1.166715 TCGA-A1-A0SO 67 0 NA 852 breast stage iib t2 n1 m0 female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6207130 10.1508084 11.6995236 10.1456529 9.2878439 8.2122663 7.2266607 10.1262410 9.9250957 12.0328989 11.0328989 10.9366836 0.4348817 13.2111972 2.5723561 6.4966221 7.6713394 8.3761875 14.4171092 11.6653473 NA 5.1129169 6.4393472 8.9173560 10.7884343 4.0198086 0.4348817 9.4052400 12.5216461 4.5558591 8.0122753 8.2473446 NA 4.1790094 10.5702992 11.3255667 9.5754207 9.4671678 10.3513231 8.8228636 -0.3020483 8.3971642 13.8727545 7.9415148 9.1803528 11.2767252 11.8644624 6.7639705 -1.8868329 10.1545775 11.0996492 -1.8868329 10.2749949 2.9202742 4.3797041 3.1129169 7.5328787 12.0369885 8.5795045 8.7585767 13.0782066 3.0671224 10.6825366 10.8928325 11.6547410 11.1174899 5.1682008 11.8402007 8.0122753 9.4263683 10.0425467 10.6025154 3.1178612 3.8678075 11.9976612 10.2598052 10.3931091 10.1366727 0.1129003 3.2003788 12.7208265 10.0587279 10.9564469 10.8701000 -0.106970 0.905120 0.391810 1.736500 0.534670 0.216370 0.112130 1.309500 0.607190 -0.527290 0.766570 -0.734330 1.267300 -0.676740 0.671780 -0.133160 2.454900 2.135000 -0.588720 1.250400 0.767340 0.072827 -0.544720 0.168500 0.744110 -0.491830 -0.491830 1.060100 0.132880 -0.538850 -0.106970 -0.541290 -0.580380 -1.059200 -1.015100 -0.820970 -0.747860 1.619300 1.045800 -1.279700 -0.946930 -1.292900 -1.292900 -0.813510 -0.990250 -0.753000 -0.616910 -0.676740 0.302820 -1.102100 -0.334500 -0.593510 -1.215800 0.230090 0.265610 0.173640 -0.459610 -0.647470 -0.671870 -0.650520 -0.610660 0.168500 -1.070300 0.097688 -0.438860 -0.588920 0.117850 -0.157330 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.708 -0.708 -0.753 -0.753 1.384 0.157 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.708 -0.708 -0.753 -0.753 1.384 0.157 7.1654859 12.0295443 3.8408358 9.1990547 1.2222481 13.4395936 -0.3020483 NA 8.5987478 3.9708997 6.0729204 7.6761334 3.1573186 10.8796542 8.9763304 8.2017064 7.6978808 11.2000497 9.3363166 9.6389284 8.5421265 9.1837101 9.2434889 0.1129003 8.4460738 9.6708607 -0.3020483 NA 10.7853437 2.6978850 11.5171286 12.7581264 7.8237245 9.8020428 9.5615509 10.8823429 4.9708997 -1.8868329 -0.8870997 0.1129003 9.2363931 7.6345185 8.5212483 8.8271639 8.5407968 5.9266992 10.2534286 5.7202484 10.5942133 2.8677976 9.6379496 1.4348284 6.4166996 9.1952937 6.4076315 5.6978822 6.6403953 6.4121261 6.3272382 -0.3020483 12.4763002 -0.8870997 10.6273859 NA 11.6230644 2.9708905 7.9505460 9.7002271 7.013785 8.173614 9.095912 13.211197 9.992502 11.152694 11.665347 7.072920 10.557121 12.494529 12.404521 11.737257 10.154578 8.491213 5.636480 8.494461 11.316266 11.293138 6.466066 8.625659 10.300889 10.395138 10.529133 4.242199 2.505230 11.032899 9.997089 3.157319 9.622198 8.749090 13.120384 9.626152 9.244775 7.640395 8.798543 4.867808 8.905823 9.575421 9.704908 10.570812 9.862788 9.192403 10.812708 8.733138 NA 9.199247 6.095912 10.274995 7.310135 10.201707 7.532879 8.233234 13.366360 9.832307 10.067115 12.296088 11.815740 9.547547 1.813361 TCGA-A1-A0SP 40 0 NA 584 breast stage iia t2 n0 (i-) m0 female 2007 NA NA infiltrating ductal carcinoma 0 NA not hispanic or latino 4 4 4 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 7.629541e-07 2.774378e-07 9.4929345 9.1246135 12.0691046 9.6525148 9.1027613 9.2876071 10.3919634 11.4936649 11.5910573 13.6827692 12.2081885 10.4980389 -0.4546246 11.6043040 3.0688599 9.9333149 8.3364606 8.0169732 9.0016520 9.7045383 -0.8224011 7.8214220 8.3299326 9.4231109 10.7048537 4.1302637 1.5452765 10.5473849 11.0808161 0.5452765 8.6194391 7.9225083 0.1302720 5.4878111 8.4892776 12.3295235 8.5424771 8.9257589 10.0021654 10.6350791 2.9376080 11.9170743 15.5320730 8.6862936 9.8570460 11.0243200 10.5143244 3.5453012 2.4522000 9.0757040 10.0950823 -1.4548224 8.6577372 4.6745793 6.5053003 6.4581868 8.5254374 12.0229295 9.9562790 11.7360483 12.5774295 6.9203374 11.2907619 10.9668366 11.3035209 11.3612813 4.1891525 11.9689389 8.8694782 0.1302720 10.0461396 10.3327922 5.5110821 6.1600065 8.5197121 9.9472437 10.8790121 9.7233399 2.0047171 7.8190933 12.5223092 11.4357520 9.9573382 9.9322379 0.2566800 0.2566800 0.2700100 -0.4503400 0.1447400 0.0043021 0.9160200 -0.1086700 0.6211500 -0.1214800 -0.5684300 1.1046000 -0.4507200 -0.4507200 0.0913000 0.0413020 1.5588000 3.3206000 -0.1725900 -0.4167600 -0.4415100 -0.3776300 -0.3925200 -0.3925200 -0.3925200 0.0854090 0.0886920 0.0840650 0.2632600 0.2566800 0.2566800 0.0020805 0.9542700 0.0066653 -0.0067813 -0.4462000 -0.4618700 -0.1195800 0.6211500 0.6601400 0.2498100 0.0905750 -0.6541700 0.0950590 0.0786370 0.0786370 -0.0376130 -0.4507200 -0.5218600 -0.0024938 0.0413020 -0.4435700 -0.4507200 3.6569000 -0.1725900 -0.1591600 -0.3958600 -0.3586300 -0.4350800 0.1551800 -0.3925200 -0.3925200 0.1545700 0.0897060 0.0840650 0.2569900 0.0133530 0.1265300 -0.451 -0.451 0.000 0.000 2.622 2.463 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.457 -0.121 0.500 0.000 0.000 -0.121 0.378 0.000 0.000 0.000 0.000 -0.451 -0.451 0.000 0.000 2.622 2.463 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.457 -0.121 0.500 0.000 0.000 -0.121 0.378 0.000 0.000 0.000 0.000 7.9715625 12.9165979 4.4521869 9.4125764 2.7152125 10.8843126 2.2457390 2.6327568 9.5247229 7.3364601 6.0766788 8.7789172 6.4936649 11.2095227 9.3486215 2.6327568 7.3558691 10.5978657 7.2106334 8.7967801 9.4636989 6.8167610 10.9562789 1.3526455 9.3876480 10.9812283 1.5452765 NA 10.1438154 8.2052938 12.7876531 12.8357486 8.0629668 10.1475326 8.2732179 10.5509222 2.2457390 3.9715619 0.1302720 1.1302720 8.9705135 9.8677892 7.7076891 7.9333147 6.3718463 6.5282916 10.2230173 3.9028454 10.1269690 -1.4548224 11.5332722 3.0047351 3.5453012 10.2888699 7.9486721 6.6642382 8.5648884 8.3051858 8.8433602 3.5896916 13.9760116 -0.4546246 11.2372593 NA 9.9338532 4.2457390 7.9440414 6.6221133 14.635038 8.884034 7.975750 11.604304 9.307680 11.006521 9.704538 10.637064 9.439790 12.503941 13.188083 12.260831 9.075704 8.262974 6.160007 7.424881 10.416818 10.952300 5.115154 8.855910 9.389219 9.518277 10.487028 6.867226 8.426412 12.208189 11.532029 5.839919 7.697583 9.609225 13.676069 10.705799 8.172832 10.288449 8.412577 7.203510 9.797845 8.542477 9.891257 10.238785 12.233876 11.837332 10.693774 9.165518 NA 9.014227 7.905047 8.657737 6.812084 10.604980 8.525437 7.759617 14.937481 11.139856 10.596847 11.972741 12.708318 9.320085 3.189160 TCGA-A1-A0SQ 45 0 NA 554 breast stage iib t2 n1 mx female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 1 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 10.1503311 9.9571737 11.8447307 9.8653129 8.4701065 9.0145679 10.9679652 9.7463475 8.0523311 14.9173450 11.7346106 10.9930262 -1.3097170 12.4473604 2.8603073 7.8578056 5.8802129 8.0168166 8.2564413 13.7532344 -0.3095382 14.4094016 3.1498121 9.4153017 10.7598370 4.7127553 NA 8.9987264 8.4217064 2.4977401 8.5232773 6.9143887 -1.3097170 5.5232765 10.0827046 9.4937112 9.7340980 9.8203141 9.9699979 11.7395551 5.4046341 9.7811613 14.4539627 8.2837598 11.0794807 10.7804997 11.1579928 4.8998427 -1.3097170 9.2564413 10.7595012 NA 11.2607173 4.7347801 5.7127553 3.4452765 10.1877402 11.5539928 10.0391154 12.8509678 12.4321702 6.4046324 10.5622924 10.3572637 11.5770364 11.4813466 4.9383140 11.6135290 13.6929386 NA 9.7611790 9.0369011 2.3388522 5.7564763 9.1018982 9.0762496 10.6318017 9.7824836 2.5972690 5.3628135 11.0114697 11.3382953 9.7340980 8.9964489 -0.0265770 0.6535100 0.6535100 0.0000000 0.0077783 0.0188030 0.0127950 0.0029133 0.0029133 0.0091705 0.0091705 0.0091705 -0.0134950 -0.0067813 -0.0108400 3.6569000 3.6569000 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0263040 -0.7347700 -0.0592690 -0.0592690 -0.1243400 -0.0313590 1.2761000 3.3004000 -0.0265770 -0.0265770 0.0030522 0.0000000 0.0188030 0.0188030 0.0127950 0.0127950 0.0029133 0.0029133 0.0102850 0.0098669 0.0098669 0.0091705 -0.0088526 -0.0088526 -0.0088526 -0.0088526 -0.0067813 -0.0067813 -0.0806600 -0.0108400 -0.7074700 -0.7074700 -0.0066432 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0263040 -0.0306770 -0.7347700 -0.0592690 0.0043021 -0.1243400 -0.7444700 -0.0123000 0.0300290 -0.0671900 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9501307 10.5335231 3.1498121 8.2353518 2.4302317 11.4508993 -1.3097170 NA 8.6077594 6.4250967 -0.3095382 6.6885832 0.6903724 10.1912291 9.5537992 3.1498121 8.0145679 10.5394013 12.1086352 10.7615143 9.9637865 9.8086795 11.3183770 4.0479397 10.1847428 9.8190261 3.7347855 NA 10.6471264 2.3908327 12.2783991 12.3373959 8.8502584 10.6594140 7.0912672 11.5091691 1.6903724 2.7778510 -0.3095382 0.2753647 8.8363193 10.1197940 11.4473605 4.7127553 6.2545374 6.5358772 9.6240779 5.9941679 9.7415963 -1.3097170 9.3521653 2.8603073 9.5097681 9.8524134 6.7918896 3.2139538 8.2334188 7.9167997 9.7409161 NA 13.3385201 1.4977401 11.1462282 NA 4.8603123 6.0997791 7.6416717 7.7155269 16.370755 4.994168 8.241134 12.447360 9.535877 10.198182 13.753234 12.595022 13.023371 10.712408 12.874178 9.965348 9.256441 8.870296 1.012283 7.615200 13.110545 10.9524821 6.3414397 8.7949860 8.8876039 9.0585227 9.8011837 5.9095547 10.1045438 11.7346106 7.1082401 0.2753647 4.5730291 7.9286966 12.9799019 9.4343801 9.2198178 9.7551299 11.1731952 4.3628135 10.1448048 9.7340980 9.9400933 10.1108738 10.7193293 9.4635264 10.7517584 8.8802116 NA 9.0986956 5.6445831 11.2607173 5.6676679 10.9855650 10.1877402 7.4519389 12.8432266 10.4381606 9.7009153 13.4257317 10.0352379 9.2149289 1.2753647 TCGA-A2-A04N 66 0 NA 4354 breast stage ia t1c n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white hispanic or latino 5 2 2 NA 2 4 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 3.121176e-07 10.4440074 9.5920660 11.6181208 8.6685085 8.7974304 9.1460875 10.2812963 9.4692258 10.0338855 12.7566323 10.5723053 10.3139934 4.9122139 12.5585374 2.9122091 10.1093030 6.5160372 8.5861290 8.5113455 13.4439049 2.8342056 13.5802608 6.7987141 10.2778336 11.4896444 4.0905571 -1.3356992 9.6970226 9.2217517 3.6184853 8.8127645 6.8979084 0.2492633 3.6642894 9.4099624 10.0683653 9.9640685 12.3135443 9.9068669 11.2143134 4.5711792 12.3513356 14.5689462 7.6117788 9.9912792 11.3979390 10.7310500 4.6415691 4.5469315 8.8713025 11.0504200 1.2492633 10.9459284 5.5591063 5.6415691 4.6184853 10.3750945 11.7575406 10.5307943 12.5962259 12.7344929 7.9122157 11.0720870 10.5656000 11.2518312 10.6611147 4.0905571 11.8113340 11.8697759 NA 10.3446477 9.9092464 4.0915560 4.6866574 11.3070167 10.5307943 10.0251351 10.8251049 2.9862107 9.1829413 13.6090916 12.7313863 9.6221157 10.0218402 -0.00092485 0.00000000 0.00000000 -0.00178330 -0.00178330 -0.01544800 0.03258100 -0.00593420 -0.00593420 0.91645000 0.98062000 2.23100000 0.00974580 0.00974580 -0.00510470 0.00479630 0.00479630 0.00265380 0.00265380 -0.00579600 0.00988510 0.02246300 0.09668900 0.09668900 0.09668900 0.04020300 0.04020300 0.04020300 0.01826100 0.03483700 -0.00092485 -0.00192180 -0.00178330 -0.00095211 -0.00980050 -0.00524300 -0.00524300 -0.00593420 -0.00593420 -0.00593420 0.01281300 -0.00289110 -0.73695000 -0.00101040 -0.00101040 -0.00101040 0.02190200 0.00974580 0.00974580 0.00871080 0.00479630 0.01221300 0.01221300 0.00265380 0.00265380 0.00265380 -0.00579600 0.00988510 0.02246300 -0.70969000 0.09668900 0.09668900 0.00960650 0.04020300 0.04020300 0.01826100 0.01211500 -0.24386000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 2.167 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 2.167 0.000 0.000 0.000 0.000 9.3045329 13.7180019 9.4040686 9.8210032 2.9437526 10.3968795 3.0566009 0.6643008 8.1216687 8.8051180 0.2492633 7.2150349 2.9122091 10.2963745 9.2131101 1.4716557 8.1440683 9.0447493 9.6075354 10.7812818 9.1714285 7.0085844 10.7394330 2.5711671 10.3998441 9.7993561 5.2034479 NA 10.8531859 3.1878469 13.0978083 12.1729495 8.1278123 10.4332994 7.8882897 9.3577750 5.9862152 0.2492633 -1.3356992 8.4241764 9.2082866 10.1067133 10.3716472 3.2492481 8.2435096 7.1481044 10.8488536 6.0566052 9.7464371 -1.3356992 10.8952091 2.7517422 4.4456473 9.8574746 5.7235777 5.1400219 9.3411267 7.4651876 7.3189242 -1.3356992 13.9930682 0.2492633 9.9479552 -0.3356992 9.5431053 5.4844669 8.1420463 8.9714889 12.917885 4.664289 8.962351 12.558537 10.515647 10.278538 13.443905 12.325955 9.212147 10.543488 12.668421 10.519546 8.871302 9.494011 1.471656 7.568170 11.495199 11.010248 7.052305 9.258613 9.529248 7.992963 10.619589 6.783229 7.909841 10.572305 7.179988 4.949689 4.522269 5.773232 11.316013 10.509386 9.174924 8.876176 10.800959 5.652974 12.310340 9.964068 10.645855 10.128323 11.512324 9.844819 10.277617 8.697711 -1.335699 9.028893 6.963496 10.945928 8.030610 10.571554 10.375095 6.824159 14.048195 10.267451 10.700462 12.739934 10.960057 9.759026 1.249263 TCGA-A2-A04P 36 1 548 NA breast stage iiic t2 n3c m0 female 2003 NA yes infiltrating ductal carcinoma 18 black or african american NA 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.809058e-06 6.935946e-07 9.3429138 8.7808153 10.4241271 6.8342549 9.7420194 8.9201736 10.3020084 10.3680446 10.7502970 11.1108867 10.1129152 10.3249414 1.3748447 11.5357029 2.3748169 10.7052918 5.9836321 9.4864805 10.0648210 7.8730737 NA 10.4718017 7.6189493 10.2841162 11.1054630 6.8342549 2.9597887 11.7385198 11.1779855 1.6378421 8.1692391 6.9416381 NA 5.0972905 8.3725669 10.4953201 8.9747358 10.0842515 9.5427429 10.7799645 0.6378421 7.5567206 14.6572744 7.1331792 9.6160912 9.7679990 9.6094009 4.0528940 0.6378421 14.7720698 12.0740484 NA 11.0588703 4.8602477 6.9108765 3.4452102 8.7892969 12.3266906 10.3457917 11.2482671 12.6035215 6.6528077 10.1659859 9.3635077 10.4973922 10.1718361 2.9597887 11.3070378 9.3860502 NA 10.5666225 8.8144463 5.0365737 4.3008193 8.8968161 9.3149899 11.0190399 9.2720636 2.7533264 7.5123265 13.1875619 13.0467179 9.4548411 10.6836171 0.013907 0.123140 0.310010 -0.476070 3.656900 0.571300 0.674060 0.601380 -0.330870 -0.315760 -0.315760 0.653140 0.424690 -0.086139 0.968220 0.611000 -0.477170 -0.354640 -0.487300 -0.494910 -0.484700 0.112130 -0.492870 -0.492870 -0.492870 1.399000 0.526600 0.526600 -0.471310 -0.363520 0.013907 0.015028 -0.461630 0.012934 -0.933270 -0.496420 -0.476170 0.604130 -0.062092 0.121520 0.309210 -0.006505 -0.939270 0.771950 -0.465360 0.626060 -0.506500 -0.086139 -0.946860 -0.510430 -0.094856 -0.438440 -0.223180 -0.357150 0.283170 -0.511880 0.193300 -0.613260 -0.537440 0.823330 -0.514930 -0.492870 -0.630350 -0.569220 0.526600 0.286280 1.306900 -0.130790 0.108 0.108 -0.438 -0.438 0.283 0.283 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.274 0.274 0.360 -0.111 0.000 0.000 0.000 0.000 -0.461 -0.461 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 0.000 0.108 0.108 -0.438 -0.438 0.283 0.283 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.274 0.274 0.360 -0.111 0.000 0.000 0.000 0.000 -0.461 -0.461 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 0.000 9.0186792 12.5647711 4.4452102 9.4781109 6.1297096 11.5922961 3.5764617 3.8602477 9.1189841 7.3102829 4.0528940 7.6490844 1.3748447 10.7173423 9.8144461 2.5123280 8.6472195 10.1653344 6.9294123 11.9477127 9.0843205 6.4958390 11.5913264 NA 9.0835620 10.1515850 2.7533264 NA 9.9355380 3.0529027 13.0348189 12.3446412 7.9477129 9.0876938 10.1034238 11.1650086 4.9355399 1.8602477 NA -0.9470277 9.0444168 11.0301749 9.4864805 5.1614201 9.0922664 8.5547320 10.5572174 6.0972884 10.7939405 6.0301749 12.1820169 2.5123280 5.3566756 10.6719319 7.1906544 7.3196812 8.7602542 8.0186792 9.0429988 6.9537623 13.9007842 0.6378421 10.6565213 0.0528332 8.6913307 4.6676026 8.5326754 8.9924742 8.4836401 8.6151374 9.3348250 11.5357029 10.1088552 11.4718017 7.8730737 8.4452123 8.1914230 9.7332545 13.4550410 9.7358895 14.7720698 7.8473111 -0.9470277 6.7739937 9.7173423 10.826858 5.607484 9.205154 8.333666 4.725321 8.915455 7.516419 6.108177 10.112915 10.942399 3.445210 4.097291 10.134957 10.377075 10.334825 7.667605 10.036601 6.410446 7.725321 12.718672 8.974736 10.426848 10.478635 10.349238 9.109533 9.889734 6.487523 NA 9.564173 8.814446 11.058870 5.462285 10.386050 8.789297 8.083562 14.649754 10.225947 10.226572 12.142842 10.921332 9.279307 3.222820 TCGA-A2-A04Q 48 0 NA 2385 breast stage ia t1 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white NA 4 4 2 NA 2 4 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.733986e-07 9.6874240 8.7713099 11.5726495 8.0069207 9.0273238 9.5095484 8.2638138 10.2719365 11.3871368 13.3025469 10.7011911 10.6288957 2.3258181 11.7016924 1.2103265 10.9199985 5.3118773 9.1132179 10.0495441 8.4880152 0.6253640 10.1102007 6.3188645 9.7896562 11.1167299 5.8445463 0.2103889 11.2728070 9.8968408 1.6253640 8.4708679 7.2028066 NA 7.5997924 9.6765867 9.9096236 9.3344617 10.1187330 9.1081857 10.4026331 8.1528547 7.2103402 14.7360854 7.5175867 9.2871560 10.6491321 9.6588008 4.0516418 NA 8.5080209 13.1548693 -1.3744489 9.8613920 6.1091934 8.3617798 4.6914672 9.9096236 11.8130392 9.9834795 12.2145608 12.5465679 6.7234098 10.6140625 9.9131132 11.0804481 10.6588008 3.4327323 11.7535333 9.3473315 1.4327457 10.7684421 10.2506300 3.4838545 5.9741071 9.7207749 9.5730147 10.2982451 10.3297137 3.1489341 8.6211449 13.1717900 13.3383346 9.6880985 9.9263022 -0.0414460 0.4556400 0.3234000 -0.0431770 0.0122700 0.0329860 0.0207630 0.0249690 -0.0690920 -0.1365200 -0.1365200 0.6178800 0.1277100 0.1277100 -0.0365380 -0.0365380 -0.0365380 -0.0040162 -0.0040162 -0.1803000 -0.0666540 -0.1161300 0.0301690 0.0301690 0.0301690 0.1004500 0.1004500 0.1004500 0.0284810 -0.0402090 -0.0414460 0.0000000 0.0122700 -0.0702690 0.0329860 0.0207630 -0.1401300 0.0249690 -0.0690920 -0.0402090 0.0293250 -0.0016629 -0.1365200 0.7373900 -0.2196000 -0.0563070 -0.0563070 0.1277100 0.2502700 -0.0976290 -0.0365380 -0.0365380 -0.0365380 -0.0040162 -0.0040162 -0.0040162 -0.1803000 -0.0779130 -0.1161300 -0.0231550 0.0301690 0.0301690 -0.1136900 0.1004500 0.1004500 0.0241270 -0.0037409 -0.1071000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 0.000 10.3919067 13.2573506 1.4327457 9.0219827 4.9473061 11.8773040 3.7952994 3.6253757 8.8469649 9.8052868 -0.3746360 9.4170210 3.8348325 11.2694594 9.0745263 2.5322671 9.0209119 9.7713099 8.0868570 9.8595964 8.8198144 7.3802654 11.1895273 3.0176903 8.1722725 10.3927346 3.6253757 -1.3744489 11.2784468 1.7953098 12.9177713 12.7254652 7.9938843 9.6281929 10.3914926 10.1909559 5.6697723 3.7952994 NA 0.9473295 9.0036728 10.1391054 7.9916998 3.1489341 9.1897369 5.7021921 10.3279834 5.1645369 9.7417218 2.8733014 11.2201689 3.2692277 4.5322671 9.7945825 7.2060512 9.0745263 10.2266843 9.6505174 11.7520822 4.5322671 13.7052792 0.2103889 11.1049055 NA 8.9618843 4.5561167 7.6833694 8.0004170 11.918816 8.456685 9.298687 11.701692 9.826889 10.698180 8.488015 9.105158 9.331010 10.955174 13.880628 11.242616 8.508021 8.172272 1.210327 7.780196 10.949840 11.130693 4.834833 8.687424 9.199025 8.408376 9.978707 9.031583 7.538267 10.701191 8.463006 1.795310 6.987322 8.251908 12.786273 11.682693 7.915673 9.194284 8.741722 9.842124 11.786867 9.334462 10.696505 10.198552 10.935422 9.365158 10.560174 7.894504 -1.374449 9.544100 11.029987 9.861392 6.825050 11.225988 9.909624 7.596921 14.038642 10.340482 10.555376 12.983754 10.807772 9.181884 5.269235 TCGA-A2-A04R 36 0 NA 3709 breast stage ia t1 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 1 1 1 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.011424e-06 5.201959e-07 10.0565402 9.8404316 11.5635365 8.9197235 9.4627178 8.3960267 9.9716513 9.8602452 9.7296965 14.1937370 9.3702007 10.6818266 0.1199537 12.8039203 3.0585070 7.7993827 7.1161401 8.8836679 9.9742512 13.1805419 0.1199537 14.1285351 3.4418287 9.4183468 11.1638409 8.4160535 0.8568662 6.5007240 9.6667967 1.3422703 8.7649601 6.5847882 NA 3.6224033 9.6551776 10.3812137 10.5915775 10.9585809 9.0337889 11.3575106 NA 11.6605147 14.0266363 7.2034351 9.4083839 11.3485205 11.1236544 4.2073619 0.5349580 8.9121501 12.3546199 -1.4651415 11.0876088 4.7443926 3.3929219 4.1199039 9.8574313 11.8795131 9.8540474 11.9955236 12.7711035 8.0347858 11.4416425 11.0424867 11.8432788 10.5214929 4.8924930 11.4369379 11.3862984 NA 10.3248809 8.9001685 3.1793677 3.4418287 9.8613692 10.1156694 11.0602158 9.7036119 5.9272565 10.1542427 12.3526230 10.9887248 10.0672957 9.0076306 -0.0622260 0.8020800 0.0485460 0.0119580 0.0149020 -0.8793800 -0.0050260 0.0026357 -0.8824000 0.0055529 0.0055529 0.8354900 0.0242680 0.0242680 0.0045800 0.0045800 0.0230050 -0.0022168 1.5905000 -0.0252820 0.0093857 0.0137720 -0.0023553 -0.0023553 1.5615000 -0.0221950 -0.0221950 -0.0221950 0.7769500 -0.8516300 -0.8317100 -0.0049844 0.0119580 0.0102850 0.0227250 0.0000000 0.0000000 0.0026357 -0.8824000 -0.8922800 -0.0153290 -0.0023553 0.0055529 -0.0101590 -0.0101590 -0.0078863 -0.8714300 0.0242680 0.0197830 -0.0089906 0.0045800 -0.8750600 -0.8750600 -0.0022168 -0.0230000 -0.0155880 -0.8654700 0.0093857 0.0144700 -0.8647300 -0.8637300 -0.0042929 -0.0033243 -0.0221950 -0.0221950 -0.0073339 0.0030522 -0.8711100 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 -0.131 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 -0.131 7.7395106 13.3236071 5.4774539 9.8243823 3.3422987 11.1133124 0.8568662 -1.4651415 9.0207691 7.6010286 NA 7.6385163 -1.4651415 10.6853217 9.4244437 1.8568662 6.4358069 9.5868283 6.6744917 11.6423203 9.2079219 7.2831328 10.5300002 0.1199537 9.8506554 9.6190837 2.5349331 2.2353901 10.8900155 3.6224033 12.3073574 11.6392109 7.3390706 9.5517481 7.8341480 9.4282412 3.9612066 1.8568662 1.8568662 0.1199537 8.9475095 9.4538030 10.3847357 3.7443979 6.4945356 7.8703302 9.9132346 5.5573090 10.8784031 NA 10.8384351 1.9943625 4.1787943 10.1406276 7.3104183 2.3422987 9.4327851 7.0506399 5.3422952 NA 13.7381730 0.1199537 10.2029383 NA 8.0876087 3.9943715 7.9379517 7.9315448 13.715544 5.622403 7.671931 12.803920 9.942234 10.207807 13.180542 12.419301 9.142270 10.905900 12.974900 11.793506 8.912150 8.872562 1.119887 8.079904 11.644934 10.494942 7.042734 8.032792 9.566985 9.407615 9.351619 3.782870 4.119904 9.370201 4.534939 1.534958 5.734612 6.824590 10.092403 9.350323 9.973212 9.622403 12.561031 3.289834 12.234674 10.591578 10.661322 9.984088 10.311784 9.231907 9.792917 8.487681 -1.465142 8.209255 4.316298 11.087609 6.834147 9.432029 9.857431 6.448427 12.818462 9.619084 9.206481 11.748348 10.671290 8.481846 -1.465142 TCGA-A2-A04T 62 0 NA 2246 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-06 5.548757e-07 9.43388939 9.17823434 11.72280232 9.02006015 8.32155159 7.47606165 9.73168051 11.33034574 11.06898587 14.39599579 11.32527133 10.92778803 0.47601870 12.28311472 3.47605760 8.95280792 6.37087917 8.68307602 10.96766433 3.56352425 0.79800903 8.85544005 8.10359573 9.42515882 11.22404486 6.73815713 1.47607056 10.06486534 11.65285823 1.93549746 9.55887603 6.75218660 0.06101577 5.25742179 9.22089557 10.39566994 8.88757279 10.45262591 9.86891575 11.54231914 0.79800903 8.35411271 15.14087009 7.28251487 9.82312932 10.83773144 10.40901462 3.38295770 1.47607056 9.62008252 9.61048802 -0.52387758 9.98137705 4.33404619 7.01522101 6.52591070 8.11630653 12.21563140 11.03496069 9.77812938 12.47244695 6.49842960 11.49252184 11.33091453 12.12486868 11.65767993 4.58458374 13.10274041 8.69280762 -1.52408503 10.39156765 9.67143403 3.64718785 5.24424775 12.02957104 11.10814818 10.85598152 8.96088466 7.24093345 8.90337455 11.63829571 11.32096359 10.44292764 10.32155182 0.428730 1.467300 1.612800 1.400200 1.074000 0.990970 0.195580 0.547530 -0.336640 0.417470 0.423350 1.907600 0.410110 -0.283580 -0.394080 0.290080 0.290080 1.844800 0.293740 2.041000 -0.384700 0.273950 -0.410470 -0.381490 -0.366910 -0.348820 0.524850 0.153230 0.430750 0.086666 0.428730 -0.942470 -0.407250 -0.452540 -0.047801 -0.419530 -0.419530 1.350800 1.603300 -0.354450 -0.473850 0.406440 -0.451680 1.350300 -0.444950 -0.194870 0.171660 -0.283580 -0.952900 -0.280130 0.270660 -0.427430 -0.504840 0.792000 -0.309120 -0.336870 -0.244840 -0.384700 0.019083 0.399610 -0.410470 -0.381490 0.343230 -0.358860 0.153230 -0.413990 -0.440560 0.069669 -0.419 -0.419 -0.427 -0.427 0.477 0.000 0.549 -0.385 -0.375 -0.366 -0.052 -0.381 -0.381 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.416 0.000 0.623 0.623 -0.474 0.411 -0.419 -0.419 -0.427 -0.427 0.477 0.000 0.549 -0.385 -0.375 -0.366 -0.052 -0.381 -0.381 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.416 0.000 0.623 0.623 -0.474 0.411 8.2574213 11.9173201 3.4302585 8.7012690 4.0907688 13.0499456 1.7980090 4.2834181 9.0084177 8.4504764 5.3587057 8.9512783 3.9996212 11.4091991 9.0142507 1.9354975 7.8069787 10.6011523 8.0999432 8.8170246 8.9164429 7.7979896 11.0589094 0.9819257 9.3176261 9.8715959 0.7980090 NA 10.6149734 1.6459783 12.8083781 13.1580687 7.4647467 9.8423840 8.3979026 10.0093914 4.9190063 2.6459783 -1.5240850 1.0610158 8.3587048 9.3355965 6.3829525 4.6053462 9.5711553 5.5635243 10.6017981 5.7979909 11.7517498 2.0610158 13.0919787 2.7979883 6.4244283 9.8651822 6.3077491 5.7979909 8.8114521 8.0171586 8.1572999 5.1484868 14.4676279 -0.5238776 11.4734176 5.1199164 9.4273464 3.8336188 7.5871977 8.0306506 9.459055 9.671434 9.548194 12.283115 11.273521 12.225722 3.563524 9.001582 9.434904 12.136838 12.973602 11.464924 9.620083 9.251672 3.761466 7.376928 11.083392 10.853543 4.030654 9.021026 9.687950 4.815914 10.811466 7.011337 5.991762 11.325271 9.253317 3.283418 9.786674 9.687244 13.864113 12.139731 8.372394 9.288239 8.676960 7.137840 10.818325 8.887573 10.217107 9.850014 11.728432 11.642696 11.151798 8.828105 -1.524085 9.283634 7.544840 9.981377 9.765504 10.690077 8.116307 7.766219 15.059336 10.766369 10.430985 12.036872 11.165841 9.512922 1.798009 TCGA-A2-A04U 47 0 NA 2654 breast stage iia t2 n0 (i+) m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 2.774378e-07 9.5651040 7.8464921 10.3038496 6.9561961 8.6515185 9.5601479 8.9440722 11.2202359 11.9168036 11.2556146 11.0496824 10.3828815 1.6402970 11.0200308 2.3772626 9.2961203 6.6700387 8.6865061 15.8888738 5.7832497 0.0553345 5.0553302 9.1494067 9.3602506 9.9448328 6.7695747 3.1427892 10.0247154 10.7202206 NA 9.2327485 8.2550012 NA 3.9133107 7.4604706 9.7798428 9.5581607 7.7592324 8.3244556 9.4710708 NA 11.1401373 13.8782980 6.6926783 9.0383226 9.7678559 10.2574528 4.6099204 1.0553345 7.0721369 10.1160248 NA 11.1058578 3.1427892 5.2841476 4.2252518 7.2937337 12.3858257 10.6017411 11.5047355 12.2453079 6.7135405 11.3349395 7.9262177 10.3430413 11.3159545 2.1697006 10.8646951 8.6002935 0.6402507 10.6237602 11.6584916 5.9978434 2.8626894 7.9831070 8.7626880 10.7475085 8.2889486 2.2252441 7.1267912 11.1038158 11.2568402 9.2841476 9.7259851 1.2605000 0.8051900 2.2850000 0.4847500 -0.0659840 -0.0639720 -0.0070576 -0.0036011 -0.7696200 -0.0373540 -0.7317000 2.0457000 1.0772000 -0.1160000 2.2522000 0.4816500 0.6057500 -0.0859880 0.4515600 -0.7740500 -0.7131000 0.7952900 -0.1260300 -0.1806800 0.1480100 1.4697000 1.3003000 0.2172900 -0.0659840 -0.0997360 0.5343200 -0.1855900 -0.7513200 -0.7483800 0.6388300 -0.7128300 -0.7036100 -0.0705360 -0.7150600 -0.7176400 -0.8517000 -0.1329000 -0.7472500 0.1659500 2.9692000 -0.0550950 -0.1187400 0.5297600 0.4356400 -0.8290300 0.4527500 -0.0268510 -0.7232300 1.5920000 -0.2504300 -0.2633600 -0.0678600 -0.7551300 -0.7457400 -0.8167100 0.2584000 1.1095000 -0.7632100 -0.8935000 -0.2110700 0.4621200 0.1495000 -0.0257560 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 -0.262 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 -0.262 6.5391448 12.2197645 0.6402507 10.2271312 2.1445033 13.1335631 NA 2.8626894 10.6166168 8.6002935 2.2252441 7.8659003 6.7967963 11.1241072 10.3962917 4.6700415 4.9622205 11.0728333 7.2889482 9.5401519 7.4941212 7.0496819 11.0776968 -0.1209216 6.4815944 10.3962917 1.3772348 NA 9.8890097 1.6402970 13.1276290 14.2558061 6.4731813 8.3772570 9.0956186 11.2586769 3.3032547 2.0553345 NA -0.9448043 8.6937650 9.9659717 7.5906043 2.9622158 9.2272313 7.5828059 11.1234354 5.2841476 9.6846855 1.8626696 10.2781238 0.0553345 4.5471845 9.1752686 5.6251857 4.1427892 8.2744974 6.2451534 6.9318461 3.7557635 14.4399441 0.0553345 10.4481830 NA 8.5867103 5.3221156 8.8068731 8.6175714 11.037955 9.478445 8.477394 11.020031 8.831762 11.195839 5.783250 10.866704 9.276916 10.066556 12.599810 11.559651 7.072137 8.939500 2.862689 8.347651 9.372741 10.5024122 2.8626894 8.8675061 9.2202359 10.3407312 10.3755992 3.3772626 4.6991851 11.0496824 12.7191094 0.6402507 10.6089583 7.9253545 12.2614275 9.1106115 7.5749651 9.2402044 4.5471845 4.6700415 10.5232859 9.5581607 9.6051135 11.2126758 9.4095783 10.8667036 10.2233742 6.3314526 NA 7.0027025 4.9622205 11.1058578 6.1106117 11.3636679 7.2937337 8.1794503 15.3034974 11.0918460 10.3772571 13.4936660 11.0272317 9.0997231 1.8626696 TCGA-A2-A04V 39 1 1920 NA breast stage iia t2 n0 (i-) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 2 NA 3 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.427581e-07 10.3211196 9.3063415 11.7798829 7.6587670 8.4859307 8.8299843 10.0321234 9.8751219 9.3663489 12.7784613 12.3165178 10.4097712 1.2895394 13.3311355 2.6114557 9.2476026 5.7379950 8.5764760 7.6500149 13.7452458 0.2894804 15.4012396 1.5119234 8.2676528 10.6430478 5.3769953 -1.2954821 9.3220383 9.0287515 1.8744822 8.5547577 6.0532982 NA 3.7489657 9.1423228 9.6839960 10.0516386 11.0180208 8.8209148 10.5741647 8.5578803 11.4955302 14.7730972 7.1550813 11.9909842 10.6649349 10.9830203 4.7269402 -1.2954821 8.3681288 10.1113073 -1.2954821 10.9158508 9.4859305 5.5500603 5.0796085 10.2805827 12.8083504 10.9048565 11.6780889 13.0022036 7.5594390 11.2009253 10.7963434 11.0979613 10.7523764 3.9525013 11.8962470 12.7738528 1.0265168 10.3434592 8.8707340 3.3489972 4.6587656 10.7683029 10.3627823 10.0382853 9.2668132 1.5119234 6.4050104 12.3527037 10.4380099 10.1742126 10.2490524 -0.00104920 -0.00104920 -0.00069303 -0.00719580 -0.00719580 -0.02320300 0.00106020 0.00704850 1.50860000 2.78060000 0.81552000 0.77195000 0.01656500 0.01656500 0.01516800 2.48810000 0.02777800 0.00471900 0.00471900 -0.01006500 0.00930980 0.03538300 -0.81170000 0.03990200 0.03990200 0.05138700 0.05138700 0.05138700 0.04160000 0.05494500 -0.00104920 -0.00622860 -0.00719580 0.00263570 -0.02320300 0.00106020 -0.01813000 0.01349200 -0.00912860 0.00499690 -0.00235530 0.00000000 0.00208050 0.00597000 0.00597000 0.00597000 0.04372300 0.01656500 0.05110300 0.02707600 -0.10368000 -0.83041000 -0.83041000 0.00471900 0.00471900 0.00471900 -0.01006500 0.02862200 0.02790300 -0.83259000 -0.81170000 0.03990200 0.01447000 0.05138700 0.05138700 0.04160000 0.01796300 -0.81260000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 0.000 8.2668132 13.9569776 7.9429754 9.4652907 3.5625477 11.4824425 -1.2954821 -1.2954821 8.7087915 8.4426632 NA 8.9520831 2.7045622 10.2049148 9.1526872 4.2281337 8.7241615 9.2998282 8.4694424 10.4690278 9.1304056 7.0083513 11.1946696 1.8744822 9.8058899 9.6463521 2.1640139 -1.2954821 10.7031613 1.8744822 12.9800406 12.2831794 7.5780149 9.9566449 7.8543180 9.4076092 2.6114557 0.2894804 -1.2954821 3.2895394 9.5547577 10.2509830 10.1475143 5.1475143 5.6587685 6.6875646 9.9411831 4.1964261 10.0298763 -1.2954821 10.6334593 -0.2954821 4.2895320 9.9253966 6.6264114 0.7046064 8.9772006 7.8644425 5.0083524 1.5119234 14.7887356 1.5119234 10.2227322 -1.2954821 8.6009031 4.0264991 8.1118388 8.4084745 15.9199103 5.4859291 8.6189559 13.3311355 10.5425929 9.9876592 13.7452458 13.0264285 9.0037102 10.3174393 12.6317932 10.7726773 8.3681288 7.8286919 0.2894804 7.4222473 10.4969544 11.148291 6.971357 9.024243 10.385809 8.304484 10.808203 5.823512 4.405012 12.316518 5.844122 NA 7.224207 6.295607 11.612588 10.238387 9.340289 9.389319 10.109180 4.485929 14.109789 10.051639 11.003206 10.032685 11.510718 8.670355 10.279164 7.781387 NA 8.534531 2.164014 10.915851 7.836428 10.996029 10.280583 6.676115 15.208412 10.459041 10.046090 12.399364 11.131622 9.748965 2.026481 TCGA-A2-A04W 50 0 NA 3102 breast stage iib t2 n1mi m0 female 2005 NA no other specify 1 white not hispanic or latino 6 3 2 NA 1 6 2 2 4 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.705019e-06 7.976338e-07 8.2641747 8.6393671 11.1397959 8.3017148 8.4672412 8.6236427 10.7334840 10.1887055 12.2031601 13.9748179 10.2418170 10.2360113 2.1118993 16.5829856 0.6968841 11.4259067 6.1779796 7.4517403 10.0389271 12.9270731 NA 10.0463181 7.7485149 9.5043576 9.9111716 6.9760760 0.6968841 8.5548336 11.3493987 2.5713128 6.6354526 6.0187810 NA 4.5042072 9.6077449 10.4738338 9.5926802 9.0514692 11.7920297 11.1147050 NA 7.6393668 15.3782007 7.9798482 10.0884541 10.0285158 10.1453129 4.6037450 6.6275893 8.4782122 12.4483965 0.6968841 10.7334840 5.3407082 4.6664782 5.1993543 9.8372563 10.9601216 9.4836667 12.6314034 12.3676562 7.9192447 10.8218354 9.8617594 10.6374108 10.9280737 2.6968618 11.5122358 10.4400039 -0.8881674 10.6583022 8.8226964 2.8123339 3.0187766 10.5355311 9.5936893 10.1189172 8.9095514 1.1118993 10.2824410 13.6930906 11.8480805 9.0891700 9.3763325 0.2635000 0.2635000 0.2638200 0.0039639 -0.0124500 3.6569000 0.2390000 -0.2326900 3.6569000 -0.0570400 -0.0570400 -0.0570400 0.0029918 0.9252400 0.1977900 0.0000000 0.0000000 0.0624460 0.0624460 0.0384270 1.4621000 -0.2370900 -0.2478100 3.6569000 -0.0916090 0.0577340 0.0577340 0.9468100 0.2232300 -0.2248100 0.2635000 0.1615400 -0.0078474 -0.0092980 -0.2466000 -0.2367300 -0.2367300 -0.2326900 -0.2326900 -0.2301500 0.2275500 0.2324000 -0.0570400 0.1371000 0.1371000 -0.2379500 0.1387300 -0.1938000 0.0013588 0.1977900 0.0000000 0.0000000 0.0061876 0.0624460 0.0624460 0.0139380 0.0120370 -0.2333000 -0.2370900 -0.0060123 -0.2478100 -0.4895700 -0.0151140 0.0577340 0.0577340 0.0163650 -0.0167640 0.2079300 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.214 -0.214 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 0.000 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.214 -0.214 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 0.000 9.0704427 14.0973317 7.2411728 9.8924297 1.6968396 11.7069143 1.1118993 0.1118326 8.5692708 8.8981597 NA 7.7843155 1.6968396 11.5244598 8.9111714 -0.8881674 6.8734417 8.8550413 11.0966644 9.6930905 9.4011942 8.3550639 11.9272733 1.1118993 7.2667078 10.3219524 2.2818169 NA 11.8858533 1.4338141 13.0492638 12.5807685 7.9573801 9.4145288 7.3645558 9.8916094 4.7843155 2.6968618 0.6968841 8.6196844 7.8667776 9.8800743 9.6442458 4.7266024 10.7446580 8.6779440 9.5815318 6.7118032 9.2424606 1.9192638 10.7024770 3.6354526 3.4338141 10.0053356 8.2102642 4.6968507 10.2980042 6.8866770 8.7521351 -0.8881674 13.6769325 NA 10.6912059 NA 9.2373034 4.9192447 8.5465183 8.7229147 12.339930 8.826136 11.709244 16.582986 10.023282 11.360707 12.927073 9.338302 8.490207 10.485843 13.119706 9.750326 8.478212 9.149437 NA 6.619684 10.598222 11.7173695 3.9192447 9.1411773 9.3786766 6.6117360 10.3132911 4.9192447 5.4156708 10.2418170 9.6864835 3.5713249 7.2308313 6.9619520 13.0259013 10.4705411 7.7412465 9.5579394 8.9431973 4.4694432 10.4612210 9.5926802 10.2039864 10.1698817 9.8726099 9.7674208 10.5386789 8.8634340 7.1286986 9.8305941 5.9945322 10.7334840 7.8295661 10.9772366 9.8372563 6.8192492 14.1485358 10.1576496 10.4847550 11.4483966 11.0055707 9.0631748 0.1118326 TCGA-A2-A04X 34 0 NA 1686 breast stage iia t2 n0 (i-) m0 female 2006 NA no infiltrating ductal carcinoma 0 white NA 6 3 1 NA NA NA 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.121176e-07 9.6259344 9.4879041 11.6455453 7.5668212 9.0524439 9.7591234 9.1499541 9.9056551 8.9739516 14.0971941 10.0252550 10.8210864 2.1128669 16.0396085 3.2283416 8.4615928 5.0670621 8.5763891 5.2827882 13.3180470 0.7879339 13.3804317 5.4227208 10.8149392 10.1896803 8.9852830 0.5278711 9.9520371 11.8215175 NA 7.7226593 6.1932375 NA 6.0277490 9.1380042 10.0519542 9.8749698 10.6409932 8.7251188 9.9975441 1.9873209 8.9383534 14.6421326 8.3568639 9.3528609 10.8710879 9.6040498 3.6571827 1.1128336 8.5763891 10.0031290 NA 11.4519724 5.6571855 6.7663063 5.2003278 9.7452541 11.8232407 9.7698853 11.5051821 12.5886825 5.8498292 10.0617186 9.4872377 10.9279811 10.6763788 3.5278961 11.6229695 11.6759020 NA 10.1481220 7.8543317 3.6982296 5.7373569 10.6367533 9.0930042 10.1356948 8.8339640 2.6978183 5.4820996 12.0557457 11.6072203 9.1100442 8.7312501 1.7124e-02 3.6569e+00 5.3169e-01 1.6783e-02 3.2422e-02 3.2761e-02 2.9466e-02 5.2853e-01 -5.4421e-01 -5.9522e-03 -5.9522e-03 2.3286e-02 -2.1613e-03 -2.1613e-03 1.2332e-01 -1.1089e-02 -1.1089e-02 4.6424e-05 2.0343e-02 -5.3764e-01 -5.1227e-03 -6.9195e-03 -7.6678e-02 3.6569e+00 1.1223e+00 -1.0880e-01 -1.0880e-01 -1.0880e-01 4.7306e-01 -1.0145e-01 1.7124e-02 1.8523e-02 1.6783e-02 3.2761e-02 5.1956e-02 2.7886e-02 2.3145e-02 5.3731e-01 -5.4421e-01 -5.4421e-01 -5.9397e-02 -5.5557e-01 -5.5307e-01 1.0842e-02 1.0842e-02 1.0842e-02 -8.7645e-02 -3.1859e-03 -3.1859e-03 2.2638e-01 1.2332e-01 -5.6575e-01 -5.6575e-01 4.6424e-05 2.0343e-02 -4.3741e-02 -5.3764e-01 -5.1227e-03 -1.5329e-02 -3.5312e-02 -7.6678e-02 -6.1873e-01 -5.3896e-01 -1.0880e-01 -1.0880e-01 4.2755e-01 3.3127e-02 -8.3200e-02 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9842567 12.0996548 8.6763788 7.5558085 5.3352581 10.7388778 3.7758302 NA 8.1015492 8.0475384 -0.4721289 6.0700050 1.1128336 11.1407707 9.1194247 4.4586379 7.5993647 9.9939787 10.4283917 11.7025158 9.8150605 7.5279023 10.8109906 1.3352546 9.1398491 9.9105263 2.1128669 NA 12.8383730 2.2283570 12.3136611 12.4971088 7.6416443 10.2235655 11.1034414 10.0553792 2.7758302 3.4347883 -0.4721289 0.5278711 9.0167465 10.1231597 11.3306205 1.3352546 4.5095248 7.6153648 10.3125371 5.6047178 9.7970289 NA 8.0767242 1.8498392 6.8985893 8.6941656 7.7414198 7.5831843 8.5123205 8.8876517 9.9955077 -0.4721289 14.2175726 1.5279211 11.0144859 NA 7.5750264 6.1128648 8.2844586 8.9955077 13.2543737 7.0592839 8.6584729 16.0396085 9.9105263 9.9980526 13.3180470 10.9832294 8.8832533 10.2034182 15.7490928 9.3360620 8.5763891 9.5229626 0.5278711 8.5250819 10.8627341 10.827969 5.822524 8.374959 6.019755 8.146618 9.532432 7.707811 8.116617 10.025255 5.242149 NA 2.615369 8.185614 9.670647 10.859659 8.114742 10.026253 8.671286 7.292773 11.735545 9.874970 11.135464 10.474808 9.701579 8.749489 10.643921 6.928781 -1.471929 8.852195 9.182538 11.451972 5.747070 10.835388 9.745254 7.869977 14.231021 10.405186 9.761522 11.534929 9.889846 9.062205 4.255825 TCGA-A2-A04Y 53 0 NA 1099 breast stage iib t2 n1mi m0 female 2008 NA yes infiltrating ductal carcinoma 1 white NA 3 1 2 NA 1 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.040392e-07 10.540898982 9.641924210 11.468653670 8.064193062 9.022107827 9.874122235 10.452382826 10.901632018 9.555405125 14.406379106 11.468483381 10.882839343 1.227679474 12.860297804 3.629787907 9.427364390 5.658742754 9.126832993 10.838716796 13.302884635 4.742264967 13.148204399 3.777893084 9.651864324 11.047643012 5.829727808 0.005328121 10.227949686 11.596821962 0.420293749 8.127696211 6.859128476 NA 4.005301170 9.483057962 9.908177176 9.113823934 10.706894841 9.767958472 11.340317690 9.217187813 10.750973898 13.958738251 8.664379726 9.062388889 10.187693899 10.886668492 3.705734668 7.661128204 8.556046542 10.858609161 NA 10.678903170 4.687122293 7.178560286 4.397618165 10.730381824 12.131251146 10.561486338 11.555084261 12.990252038 7.673002305 11.151443955 10.053818252 11.608616837 10.930854034 3.629787907 12.299537425 9.050604269 NA 10.050149034 8.904152890 4.944211899 6.459256189 10.632225403 9.965301478 11.164750522 9.829197562 1.742264967 6.085673214 11.946836331 12.179913256 9.891504249 9.366512375 -0.12486000 0.40194000 0.91016000 0.00000000 -0.05428600 -0.00678130 -0.00774820 0.00968720 0.00968720 -0.56616000 -0.55236000 3.65690000 0.01070300 0.01070300 -0.02205800 -0.02205800 -0.02205800 0.00291330 0.00291330 -0.00954260 0.01117300 0.01488800 -0.54239000 0.01670500 0.54806000 0.03665300 0.03665300 0.03425400 3.65690000 -0.09432800 -0.12486000 -0.56863000 0.00930980 0.02398700 -0.01244600 -0.00774820 -0.00774820 0.06923900 0.00968720 0.00341580 -0.00097017 -0.00097017 0.00166420 -0.00725670 -0.00725670 -0.49590000 -0.01106000 0.01070300 0.01070300 -0.02205800 -0.02205800 -0.02205800 -0.02205800 0.00291330 0.00291330 0.00291330 -0.00954260 0.00833510 0.01488800 0.03059100 -0.54239000 0.01670500 0.00944910 0.03665300 0.03665300 0.01195800 -0.00138580 -0.54421000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 0.000 8.945857857 12.380157964 3.943902578 9.046045988 4.253225373 10.411150163 1.005328121 0.420293749 8.035047046 8.191826638 NA 7.201696586 4.959496611 11.356606961 10.006707848 3.879764571 7.610161874 9.127696211 9.138013449 11.651258211 9.906714606 7.582728351 10.980669921 2.934459887 9.446860604 8.977800803 2.943902578 NA 11.425610780 2.590266665 12.965180823 12.941876203 7.451004173 10.262687427 10.208647595 9.773483928 7.597756857 2.005292186 -0.579706251 5.714957072 9.283749109 10.508131395 10.540575021 4.175221180 9.077700179 8.171881331 9.809430683 6.590262173 10.169787613 NA 9.564357970 2.420347653 5.733218743 9.806226409 6.099816972 5.005301170 9.885903460 7.775687969 9.296086361 0.005328121 14.440926459 0.005328121 10.731517770 -1.579490650 9.568813644 5.486424775 8.183549537 8.577684110 13.391782767 7.188521593 9.054240444 12.860297804 10.693278815 11.689025309 13.302884635 11.791160690 8.515734131 10.222449581 12.803771412 10.246885573 8.556046542 8.925156216 0.005328121 7.513094329 14.393810266 10.771828 5.351074 8.530168 9.787752 8.671819 10.168794 7.250060 9.602111 11.468483 7.201697 0.742265 5.064193 9.030707 9.450315 11.158218 8.916192 10.494479 9.573889 5.959497 13.749634 9.113824 10.495816 10.068695 11.984606 9.129421 10.550586 8.027667 NA 9.176451 6.600246 10.678903 5.035048 11.437735 10.730382 7.351074 14.127804 10.696171 10.606451 11.443052 10.404043 10.425962 2.590267 TCGA-A2-A0CK 60 0 NA 4159 breast stage iiia t3 n2a m0 female 2001 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 3 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-07 9.7142455 8.7640339 11.6936277 6.7906039 8.7024002 8.3843149 10.3838788 9.6336190 11.0418527 9.5964533 12.4139911 10.3026735 3.2161289 13.3644995 3.1520049 9.9889141 7.5994621 8.5047487 8.8910166 13.0196328 0.2775087 14.5032435 6.2924836 9.5586140 10.1035527 4.8423202 NA 10.0583471 9.5835956 NA 9.2249273 6.4607557 -1.3075728 3.4474602 9.1156875 10.1225012 9.9843178 10.7693870 9.4549536 10.7024001 11.6173840 10.8916303 14.6543829 6.7973801 10.6485845 9.8302030 10.4950878 5.9779736 1.0144981 7.7314908 10.5404118 -1.3075728 10.6155275 4.8624960 5.3219281 4.6925723 9.9831663 12.0691039 10.5250660 11.7813597 12.2360867 8.7024002 10.8098899 10.9871922 10.7002996 10.7529297 3.4474602 11.8868666 12.3069362 -0.3073943 10.4950878 8.9273889 3.9043589 4.4474602 10.5896606 9.7177110 10.4281275 9.1611956 5.5873890 7.4441154 12.9294079 12.1498241 10.2180923 10.3680876 0.00235810 0.68333000 0.69914000 -0.00332430 -0.00332430 -0.00512270 0.01140000 -0.00539920 -0.00539920 0.00471900 0.00471900 0.00471900 0.00499690 0.00499690 0.08449800 3.65690000 -0.68997000 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00930980 -0.68970000 0.08045600 0.08045600 0.00485790 0.00485790 0.00485790 0.01572700 0.00235810 0.00235810 0.00041593 -0.00332430 -0.00512270 -0.00512270 -0.00705760 -0.00705760 -0.00539920 -0.00539920 -0.34607000 -0.00387790 -0.00664320 0.00471900 0.00458000 0.00458000 0.00458000 0.00958830 0.00499690 0.00499690 0.08449800 0.06565600 -0.69626000 -0.69626000 -0.00124730 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00930980 -0.72491000 -0.69555000 0.08045600 0.01880300 0.00485790 0.00485790 0.01572700 0.00541390 0.01586600 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8774467 12.7750532 5.3790733 9.9640345 3.8488082 11.0813960 0.2775087 -1.3075728 9.4016552 8.4755697 0.2775087 8.5411946 4.9593575 9.7444602 10.0201241 4.3930111 8.2278469 9.2737721 10.3781963 10.3409291 9.5280061 6.9261916 11.1884265 2.4999352 9.4085336 10.3127913 4.5994606 NA 10.8537034 3.8218530 12.8606951 12.2008615 9.8063136 10.2224900 7.9593581 9.6862176 3.6925723 1.8625109 -0.3073943 3.6467733 9.1313634 10.1550737 9.5706223 6.7747199 6.9916874 7.9165734 9.9957814 4.0848892 9.5775051 -1.3075728 11.2442797 0.6926057 4.4474602 9.7143080 5.8282304 4.1188331 9.9165731 8.7680506 6.9686956 -1.3075728 14.1985691 1.2775087 10.4906382 NA 7.7396956 5.7586603 7.5063528 9.1019623 15.3443899 5.1355143 8.4441154 13.3644995 10.4967025 10.2845612 13.0196328 12.4681817 8.5660156 10.1375863 13.1874271 11.6264465 7.7314908 8.2180924 0.6926057 8.1924176 11.0808579 11.229062 6.664114 9.073033 9.707289 7.911740 10.481828 7.067611 7.473931 12.413991 6.968696 NA 10.867185 6.906939 9.309120 10.200861 7.874966 10.155074 8.587389 4.977976 12.116607 9.984318 10.899586 10.504348 10.316910 9.780697 10.495895 6.902025 NA 9.157475 5.902025 10.615527 5.216133 11.587200 9.983166 6.686925 14.814914 10.286896 9.838504 12.537866 11.335751 9.762021 1.014498 TCGA-A2-A0CL 37 0 NA 3015 breast stage iiia t3 n2a m0 female 2006 NA yes infiltrating ductal carcinoma 9 black or african american not hispanic or latino 7 2 2 NA 1 3 3 4 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 10.4104600 10.1540111 11.6764707 9.8815596 8.6422510 9.9539720 9.2173657 10.6294808 10.4311343 13.6411633 11.3523355 10.6111370 2.5681051 11.5282926 3.2685542 9.4423225 5.6555722 9.3371210 12.1836243 11.2947536 -1.4320652 12.5814323 4.0275433 9.6675824 10.4888347 4.4507560 0.5681294 11.5679106 10.1638333 3.9943715 9.0151928 7.6315045 1.3754565 5.8627316 10.7582430 10.5977420 9.7286114 10.3604932 9.4869730 11.3609000 2.3754565 7.9943744 15.1238821 8.6834786 9.4009838 11.5994663 11.2939019 4.4260903 5.4507527 9.5482491 12.0233084 NA 10.6938460 6.9168373 8.7417868 5.5106234 10.6818518 11.7303436 9.6844536 11.9090724 12.8190002 7.7102168 11.0224089 10.2367376 11.3360871 11.3590690 5.1974644 11.2860002 11.1166908 1.1530919 10.4955173 9.2119659 3.6190491 8.0639645 11.0982721 9.9393418 10.8222525 10.2088064 3.2685542 6.5849174 12.6754902 12.6109660 10.2973055 9.5765382 -0.0302300 0.0662290 0.0662290 -0.1712600 0.0363700 0.4168700 -0.1206900 0.0000000 0.0000000 -0.2225600 -0.2225600 0.1971000 0.0716780 0.1801100 -0.0572500 0.7368200 1.1227000 0.0533940 0.0833420 -0.1229100 -0.0697670 -0.1218700 -0.0086463 -0.0086463 0.0670880 0.0091705 0.0091705 -0.0444900 0.5253800 -0.0302300 -0.0302300 0.0488300 -0.1712600 -0.2419200 -0.1506700 -0.0773920 -0.0773920 0.0000000 0.0000000 0.0199230 -0.0807860 0.0549450 -0.2225600 -0.1913700 -0.0355850 -0.1046200 -0.1046200 -0.1184800 0.2024400 -0.0572500 -0.1261600 -0.1353600 -0.1353600 0.0774300 -0.2818000 0.0700990 -0.0312230 -0.0697670 -0.1222000 0.0712480 -0.0086463 0.0670880 0.0642250 0.0091705 0.0091705 0.4614400 0.0081959 -0.1478500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 -0.105 -0.105 0.190 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 -0.105 -0.105 0.190 0.000 10.880709 12.917529 7.582130 10.420249 7.006402 10.361306 7.039784 NA 8.555374 7.784855 NA 8.832552 3.474994 10.579686 9.404160 3.322995 11.004561 9.871320 10.322580 9.729242 8.689811 7.694814 10.852355 4.426090 5.362526 10.551460 6.115004 NA 11.296243 2.375457 12.822105 11.973916 8.141757 10.058459 11.144358 9.160567 7.278916 1.890019 1.153092 2.816047 8.810093 9.101439 9.357643 5.579337 9.315212 7.510624 10.151663 6.419859 9.838989 NA 10.468599 5.907960 4.498844 9.807541 5.722523 8.687051 10.115968 9.573032 9.740537 -1.432065 13.406526 1.375457 10.704140 NA 7.799331 5.153072 7.869606 8.543957 12.673178 7.261597 9.545390 11.528293 10.312103 10.168487 11.294754 10.182359 9.893415 11.050918 13.600586 10.796928 9.548249 8.201105 1.153092 7.548249 11.412031 10.9705888 4.3229953 8.8809925 8.3028194 9.5081368 9.9955115 9.6805492 8.1680227 11.3523355 6.9817374 0.8900186 5.9256624 8.9719099 10.6730360 11.5430619 7.7102168 8.0234367 10.6944914 9.6542459 11.6619547 9.7286114 10.4701078 9.4221989 11.1670926 10.2209546 10.2497873 8.9034999 7.6475944 9.6300749 9.8655992 10.6938460 5.1828194 10.8804254 10.6818518 7.9604700 13.3439694 10.2637729 10.2209546 12.6183835 11.0265162 9.2874984 4.2405357 TCGA-A2-A0CM 40 1 754 NA breast stage iia t2 n0 (i-) m0 female 2003 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.040392e-06 3.467973e-07 10.4581145 9.3510536 11.8122453 9.1605917 8.2896086 9.4467097 9.7724494 11.1535940 12.4039807 13.0995452 10.6221371 10.5969943 0.8844807 11.1474430 2.2063932 10.2030101 7.6191767 8.6543052 9.8588819 5.7913583 NA 7.7362166 5.9612830 9.4245953 10.8089087 6.8674604 1.2063932 12.5094912 11.6650071 -0.1155974 9.6038561 8.1180871 -1.1155974 5.2420194 9.1132861 10.5005566 9.1721797 9.9897210 10.0131061 8.8152046 1.2063932 8.8717312 15.2517285 8.9582073 8.9982093 10.7792851 10.3263740 4.5283213 NA 9.6707370 10.2120199 NA 11.4440834 6.1418558 7.5568923 8.0865911 9.1252587 12.2770530 9.9545882 11.8218411 12.8201848 6.0137503 10.8170512 10.4902107 11.4107220 11.5722803 5.3107327 12.2609997 9.8900919 NA 10.3403082 10.0437080 3.6020055 6.4001673 11.7171596 9.5019347 11.0118169 10.4996371 1.6918021 6.6055669 12.1101266 11.6059938 9.7126039 9.7006509 0.174460 1.129800 -0.070058 0.319020 0.552760 -0.021980 -0.257620 0.246590 0.539350 0.424790 0.424790 1.340300 1.212200 0.324720 0.126170 -0.334960 -0.334960 -0.051644 0.370540 -0.233420 -0.095837 -0.105380 -0.270980 -0.270980 -0.270980 -0.291590 3.656900 0.016645 0.539700 0.143040 0.174460 -0.005873 -0.237950 -0.251940 -0.100710 -0.301740 -0.313940 0.246590 -0.122310 0.513430 -0.111090 -0.110000 0.279410 0.507170 0.507170 0.161540 -0.079452 0.324720 0.267400 0.157640 -0.334960 -0.363490 -0.363490 0.020703 0.166940 0.325370 -0.677400 -0.104130 -0.126210 0.316350 -0.739880 -0.270980 -0.235850 -0.291590 0.016645 -0.457940 0.286370 -0.304450 0.325 0.325 0.118 -0.217 0.000 0.000 -0.677 0.000 -0.126 0.283 0.283 -0.308 -0.308 0.278 0.122 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.304 0.000 0.000 0.478 0.478 -0.162 0.000 -0.302 -0.302 0.247 0.247 0.000 0.000 0.623 0.623 0.507 0.000 -0.026 0.276 0.325 0.325 0.118 -0.217 0.000 0.000 -0.677 0.000 -0.126 0.283 0.283 -0.308 -0.308 0.278 0.122 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.304 0.000 0.000 0.478 0.478 -0.162 0.000 -0.302 -0.302 0.247 0.247 0.000 0.000 0.623 0.623 0.507 0.000 -0.026 0.276 8.9096069 13.3083711 1.4694172 9.1477366 3.2767795 11.4072940 1.8844807 NA 8.7762511 5.6393537 NA 7.3232593 2.3438910 11.1945120 9.4759897 0.8844807 8.1084690 10.8949954 6.9343160 9.1216773 8.8614179 7.1836751 10.5413390 2.4694172 8.8872822 9.4964142 0.4694693 -1.1155974 10.3149199 1.8844807 12.4037350 12.6542019 6.8674604 9.3872992 10.5599833 10.1996169 -0.1155974 3.2063932 1.6918021 2.2063932 8.4352139 9.1406759 6.3274107 3.6918245 8.6414073 7.3315503 9.9884107 4.4991762 9.2638457 1.8844807 12.5606448 3.8844709 4.2767870 9.4690259 6.8250453 6.1790890 9.3346476 8.6934315 8.7898544 5.7913583 12.9444876 2.2063932 11.1905290 NA 9.2475070 3.8844709 8.4505213 6.6658276 12.491682 10.719728 8.041814 11.147443 9.307583 10.506977 5.791358 10.566584 8.427499 10.594843 14.179483 12.973173 9.670737 6.343898 -1.115597 7.356143 11.569873 10.7655812 5.3274107 9.3783228 8.6225596 8.8745714 10.2935983 8.1442106 5.0543927 10.6221371 10.7054440 0.4694693 8.5692157 10.0608151 13.0975715 11.2156642 8.1882481 9.6191769 8.8872822 8.0841398 11.0471041 9.1721797 10.4153613 9.6788832 12.6524448 11.6950389 10.5948433 8.9343160 NA 9.4324028 8.0914814 11.4440834 7.6918224 11.2546097 9.1252587 8.5265188 13.7422539 10.8592404 10.1629167 12.8026783 10.9959290 9.4371364 2.3438910 TCGA-A2-A0CO 85 1 3492 3409 breast stage iib t3 n0 m0 female 2002 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 3.121176e-07 9.9963462 9.3618635 11.6688757 9.2305755 8.4584037 9.1048621 11.0897322 9.5720347 11.3924520 9.8949128 11.4616130 10.0649080 2.6476138 13.3990506 2.6476138 10.5936471 5.3700841 8.5971531 9.6325112 12.2710119 0.7407117 13.0145960 7.0214986 9.6565173 10.1059564 5.7851216 -1.2591156 10.5043382 8.1564694 4.4686485 8.9767417 7.1244315 0.3257318 5.1669926 9.6025899 10.0080994 9.5846486 10.4648150 9.5302612 11.1583163 7.3480580 9.9671396 15.2117041 8.0005882 10.7265694 10.4964497 10.7703599 5.5480821 4.4411647 8.5877850 11.7926162 -0.2592883 10.5278138 6.7463517 6.8068164 5.0075140 9.7287020 11.4274469 10.2440564 11.8049650 12.4158024 8.2760029 10.4420340 10.4332907 10.6777335 11.3926761 5.4821932 11.4069515 11.3455124 -1.2591156 10.7279916 8.7782746 4.1354446 6.6294703 10.0916666 9.1659433 11.3818761 9.1939981 3.8700096 9.6788369 13.4363908 13.1088247 9.7400229 9.9100262 -0.4881700 0.5324600 0.5789800 0.0011093 -0.0085045 0.0241960 0.0953630 -0.0849260 -0.0849260 -0.5959400 0.0987060 0.0987060 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4506100 0.0315770 0.0000000 -0.5007900 0.0662290 0.0662290 0.0582240 0.0582240 0.0582240 0.0957320 0.0862330 -0.4881700 -0.0623610 0.0011093 0.0241960 0.0509610 0.0953630 0.0953630 -0.0849260 -0.0849260 -0.0849260 0.0421660 0.0214620 -0.5959400 0.0889820 0.0889820 0.0889820 0.0889820 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4909900 -0.4574700 0.0315770 0.0000000 -0.4960000 -0.5007900 0.0662290 -0.0563070 0.0582240 0.0582240 0.0966700 0.0946370 0.0912440 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 0.000 10.3256900 12.8537371 5.5220871 10.5640948 5.8282965 10.9989991 6.5416279 1.5480913 8.8661411 8.2062940 1.0626744 8.6347116 4.5220871 9.3303787 9.7789607 2.4411647 10.2652693 9.3791635 11.4641752 10.4472236 10.0631739 7.7713944 12.3700841 2.9106559 10.0004708 10.5456651 7.6832417 NA 11.2677157 3.7407225 12.7192592 12.0740226 8.8255360 9.9193924 10.0828022 9.5545087 5.4272273 1.0626744 -0.2592883 7.5155146 8.9268418 9.6898247 10.2360829 6.6110927 7.3801043 7.2564276 9.7939747 7.1669926 9.3609474 NA 12.0366399 4.7407279 6.0716447 9.1078691 6.3535968 7.3369171 10.7343735 8.7265693 8.3369171 2.4411647 13.4662535 3.3256886 10.5327043 NA 7.5830775 6.9839011 7.4652415 8.8466359 12.439669 4.468648 8.624898 13.399051 9.874512 9.798719 12.271012 12.523930 8.653183 10.336451 13.753701 12.420867 8.587785 8.277946 1.325674 7.264290 11.059270 11.670171 6.875153 8.528630 8.069403 7.272109 10.263461 8.993393 8.802774 11.461613 7.423722 5.560908 7.809506 6.538259 10.922190 10.954136 7.900599 9.002822 11.228568 7.900599 12.432595 9.584649 10.483879 9.968945 10.884111 11.427666 10.564095 8.686171 -1.259116 9.859552 8.461827 10.527814 5.859669 11.825536 9.728702 7.635545 13.457493 9.961106 10.488501 13.076537 10.866141 9.917524 3.264296 TCGA-A2-A0CP 60 0 NA 2813 breast stage ia t1c n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 NA 2 4 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 9.772587 9.077389 11.284615 8.052109 8.374037 8.694215 9.841659 9.546874 10.933517 12.422576 10.616278 10.022665 4.280734 12.713203 3.422758 10.775899 5.651571 8.644339 8.296197 11.964333 3.670682 13.719884 6.930547 10.387815 10.840605 4.670682 NA 9.537796 9.978300 3.592672 7.712771 7.274501 NA 4.376950 8.817215 9.695382 10.072009 11.437470 9.347565 10.635249 4.744683 10.555252 15.380557 7.189149 10.629156 11.049830 10.502904 5.400032 2.230111 8.341616 11.705841 NA 11.238136 6.242932 5.037461 3.815073 9.955108 11.807266 10.932527 12.693486 12.439038 8.595180 10.809693 10.389258 10.500903 10.888829 3.882183 11.750586 10.626712 1.007698 10.672458 9.226883 4.517408 4.230111 11.464754 9.872933 10.263530 9.615045 2.592684 10.038382 13.347936 12.423281 10.003011 10.197539 1.2939e-02 -4.9449e-04 3.4734e-03 9.7532e-04 -7.5881e-03 -1.4086e-02 -7.7435e-03 1.6794e-03 -1.3509e-02 8.5127e-01 8.5127e-01 8.4149e-01 7.7830e-03 7.7830e-03 0.0000e+00 0.0000e+00 0.0000e+00 -4.7032e-03 -4.7032e-03 -8.4339e-03 1.4315e-05 2.6072e-02 2.1608e-02 2.1608e-02 2.1608e-02 3.5246e-02 3.5246e-02 3.5246e-02 1.3916e-02 1.2939e-02 1.2939e-02 3.3346e-03 -5.6711e-03 2.2589e-02 1.3915e-03 -7.7435e-03 -7.7435e-03 1.2662e-02 -1.3509e-02 -7.1911e-03 -4.7714e-03 3.7512e-03 -4.6470e-01 7.5047e-03 7.5047e-03 7.5047e-03 7.5047e-03 7.7830e-03 7.7830e-03 1.1265e-02 0.0000e+00 2.6404e-03 2.6404e-03 -4.7032e-03 -4.7032e-03 1.6713e-02 -8.4339e-03 1.4315e-05 1.4195e-02 -4.3983e-01 2.1608e-02 2.1608e-02 -3.4579e-03 3.5246e-02 3.5246e-02 1.3916e-02 1.4332e-04 -4.3257e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 0.000 8.9657843 14.0165521 9.0466340 10.4793901 3.1539350 10.8620640 2.4227443 2.0076978 8.9926081 9.5221003 0.4227712 8.0448045 5.0374613 10.4057461 9.0208050 3.2301108 8.6125770 8.9206044 9.4630422 10.9270749 8.7799084 6.8150694 11.2713754 2.3880793 8.7196688 10.1004721 6.4888411 NA 10.8703523 4.0077158 13.7923498 12.4999020 8.2807337 9.7637151 8.0916374 9.7469330 5.8150707 -0.5773364 1.0076978 6.6515713 9.4630422 10.1717839 9.1489707 5.6125766 8.6508977 6.9065684 10.6328149 6.0374613 9.3311451 2.0076978 11.2536637 2.8821931 4.3769502 9.9007231 7.0193895 3.9463098 9.7781036 7.4942148 8.6563723 0.4227712 14.3331141 NA 10.6150453 NA 9.1110029 5.8821833 7.8363805 9.2333242 12.7668320 4.0077158 8.6871951 12.7132034 10.2373350 10.5247281 11.9643331 12.3256928 9.2155427 10.0995911 12.9348756 10.7339331 8.3416158 9.0484613 -0.5773364 7.1506734 10.3393784 11.4691944 5.6125766 9.0448042 9.4395608 6.4780350 10.3522920 6.1506734 7.4616718 10.6162778 8.1438515 4.0077158 7.5571788 4.9286451 11.6110322 10.2776209 9.2236523 9.8923942 9.8332038 5.0077158 11.6185338 10.0720086 10.8495414 10.4834484 10.6413157 9.7208151 10.6303769 8.5926775 NA 9.6643781 6.9849949 11.2381358 7.7626026 10.8719011 9.9551083 6.7446805 14.8096254 10.2900312 10.5181495 12.8564683 10.9055604 9.6297668 0.4227712 TCGA-A2-A0CQ 62 0 NA 2695 breast stage ia t1 n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 5 5 2 NA 3 1 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 3.467973e-07 10.0135679 8.6713005 11.2723990 7.2191211 8.7368044 9.9032346 9.7148898 8.8639456 10.1689581 12.9122235 10.7583914 10.1955769 3.3732027 12.7114353 1.8371359 9.0964179 8.6040057 8.0426941 9.2043418 13.3351968 1.9746394 14.1301285 9.0803195 10.6325325 10.8959490 9.5116908 0.1001703 12.4119405 8.3047510 1.5152078 8.1169880 6.4982110 NA 1.1001703 8.4939279 9.9139611 10.7743721 10.1473038 8.5555071 10.5042570 2.4220984 10.1823289 14.6809488 8.9693315 10.1427513 10.8617311 10.7261930 4.2431359 8.8348894 7.6976119 11.6315613 -1.4847922 11.0063189 4.3731958 5.2156553 4.8189988 10.1193073 12.0514646 10.9547885 12.0000403 12.6445809 8.8382720 10.8771612 10.2780270 10.7355957 10.9219539 3.3732027 11.4885560 9.9777197 NA 10.7919234 8.4838843 3.6026825 4.9746486 11.1552363 9.4939279 9.9435775 8.7099743 2.2156475 8.4910654 13.5020371 11.0630759 9.9240778 10.0338705 -0.00830050 1.01040000 1.01030000 0.01028500 0.01028500 0.01293400 0.01070300 -0.68624000 -0.68624000 0.00208050 0.00208050 0.00208050 -0.00798480 0.00000000 -0.00567570 -0.00567570 -0.00567570 0.00402430 0.00402430 0.01000600 -0.00152430 -0.01176400 -0.02000100 -0.02000100 -0.02000100 -0.02808100 -0.02808100 -0.02808100 -0.02041200 -0.00830050 -0.00830050 -0.00318590 0.01028500 0.01293400 0.01153900 0.01070300 0.01070300 -0.68624000 -0.68624000 -0.68624000 0.01126100 0.01126100 0.00208050 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00000000 0.00000000 -0.00567570 -0.00567570 -0.00567570 -0.00567570 0.00402430 0.00402430 0.00402430 0.00795450 -0.00152430 -0.00719580 -0.67324000 -0.02000100 -0.02000100 0.00180300 -0.02808100 -0.02808100 -0.02041200 0.00083195 -0.16536000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4503824 12.2377047 5.2965785 9.8815395 4.0365825 10.9409578 0.8371359 NA 8.6976119 8.0465991 NA 5.6237411 2.5152078 10.6557277 9.5792865 2.1001703 6.1151311 8.5334177 9.1982120 10.6125912 9.6040320 6.7343858 10.4288548 4.0387786 9.7081265 9.7044242 3.3732027 NA 10.8711190 1.8371359 13.2934999 12.3097348 6.9746486 9.4860424 8.3824961 9.7930860 2.3225627 4.6649663 1.1001703 9.2990342 9.0309173 11.3753344 9.2533095 2.9075252 7.6213354 6.5759128 10.4773904 5.4810018 9.5060304 NA 10.6614678 0.5152078 4.8189988 10.1375713 7.1678115 0.1001703 7.8595130 6.8006191 3.8727697 0.5152078 14.4398907 0.1001703 10.1076744 -1.4847922 9.6994729 6.0774588 7.6263530 8.3978603 13.5174241 4.6237440 8.9612668 12.7114353 10.5870149 11.3632534 13.3351968 11.8347484 9.0850730 9.7761369 13.5377586 8.7452377 7.6976119 9.4378018 0.1001703 8.0831735 10.8722195 10.593702 7.077460 9.063076 9.176105 8.040738 10.144651 7.303120 6.151843 10.758391 5.581306 1.515208 8.426609 6.122695 8.801775 10.210881 7.483884 9.662422 9.070765 2.215648 13.259353 10.774372 11.004564 10.284229 10.849211 9.120697 10.572871 7.191175 1.100170 9.587089 2.515208 11.006319 8.501059 11.011322 10.119307 7.428106 14.411668 10.186758 10.870844 12.621453 10.015063 10.090757 1.515208 TCGA-A2-A0CR 54 0 NA 3283 breast stage iib t3 n0 m0 female 2004 NA no infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2.878418e-06 5.895554e-07 9.2704014 7.8487519 10.6620739 4.2270479 9.0932971 9.0575261 9.3883605 9.2724833 11.5594582 11.0420506 11.1339392 10.0713434 0.8347112 12.2205936 0.8347112 11.1538388 6.3582925 8.5351708 8.3002976 11.4776854 2.2941649 12.8401803 7.8234156 10.5148709 9.3835531 5.2609967 -1.1652079 12.2781293 9.2054187 -0.1652079 9.7573157 5.5761986 NA 5.6420864 8.9221940 9.2651837 8.9857477 10.2162742 7.9717223 9.9665882 5.4196939 10.1009321 14.3319281 4.2977637 10.5005112 9.4595267 8.9182106 5.4929427 4.7654711 7.0921186 10.8258987 -1.1652079 10.5728235 5.4785868 6.9484735 4.3582908 9.2195149 11.7171832 10.8048371 11.9345721 11.6309736 8.3969738 10.1928329 10.3048816 9.9851131 10.0927083 1.1566555 11.2557441 10.6695972 1.1566555 10.4003093 8.1453437 3.2160202 5.0245546 10.9549691 8.9627254 9.7860159 8.4604399 7.0490502 9.9115467 12.7978982 12.6675223 9.9863821 9.9517249 0.00471900 0.00471900 0.00471900 0.00172770 0.00263570 -0.00553750 -0.00539920 0.00152550 -0.18262000 0.00000000 0.00000000 0.00000000 -0.00041585 -0.00047973 0.00305220 0.00305220 0.00305220 -0.00705760 -0.00705760 -0.08434500 0.00034449 0.00736090 -0.21082000 -0.21082000 -0.21082000 0.01334200 0.01334200 0.01334200 0.00833510 0.00471900 0.00471900 0.00025108 0.00172770 0.00346870 -0.00553750 -0.00180140 -0.00381490 0.00152550 -0.18262000 -0.18262000 -0.00069303 -0.00263620 0.00000000 0.00597000 0.00597000 0.00597000 0.00597000 -0.00047973 -0.00047973 0.00305220 0.00305220 -0.10196000 -0.00152430 -0.00705760 -0.00705760 -0.00705760 -0.05644200 0.00034449 0.00736090 -0.15144000 -0.21082000 -0.21082000 0.00875280 0.03594700 0.01334200 0.00833510 0.00332990 -0.21886000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.2294618 12.7249004 5.4346449 9.8736502 8.0850294 10.9098761 7.5694410 0.8347112 9.6596898 8.7535945 -0.1652079 7.0490502 5.1922849 9.7158452 9.5887836 3.0826515 9.5142112 8.3796955 10.7794433 10.9221941 8.9992108 6.1293510 10.8828775 1.8347112 9.5150907 10.5238556 6.0344028 NA 11.1773615 3.4785836 13.8626372 12.5219975 8.0294882 9.4178139 9.4512799 10.1430703 2.9221978 1.8347112 0.8347112 8.8981264 9.6012601 11.5364708 9.1224437 4.5626515 7.8042905 8.6549102 10.0903500 4.7654711 9.4494411 -0.1652079 10.8684983 2.5351820 4.0826600 9.4796509 7.3939172 8.1453437 10.8407066 9.4586127 11.4448333 4.0441843 14.3004251 2.4197007 10.9803450 -1.1652079 8.0897598 6.0921186 7.3185473 9.2745620 12.524963 5.548976 8.322571 12.220594 10.446678 10.167887 11.477685 11.331585 9.068674 9.887978 12.956346 10.640878 7.092119 8.492943 1.834711 6.492943 9.355350 10.696594 4.326588 9.024531 8.903510 6.895427 9.302785 10.008408 9.371950 11.133939 8.366113 3.741618 8.524729 7.817810 8.926167 11.347472 7.654910 10.523856 3.589620 9.075522 11.509808 8.985748 11.286457 10.073136 9.171238 10.249416 10.247830 5.024555 6.192283 10.369929 9.902838 10.572823 4.964015 11.242265 9.219515 7.244122 15.008155 10.477685 10.073136 12.072240 11.336071 8.831911 2.834731 TCGA-A2-A0CS 73 1 2348 2298 breast stage iv t4b n3a m1 female 2004 NA yes infiltrating ductal carcinoma 12 white not hispanic or latino 5 5 3 NA 3 1 1 1 4 4 1 3 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 10.1238993 9.1857969 10.9902094 7.6156201 8.7821464 9.3701301 9.6795288 9.5899333 10.9166910 13.6939685 10.5540717 10.4570011 5.3600341 13.1181452 2.4692608 9.9490436 7.7203510 7.4579480 10.9483699 13.4188469 -1.1155974 14.5548741 3.6391858 10.7460856 10.5113787 5.5707999 -1.1155974 12.4446397 11.2429520 0.4692608 7.9875886 6.5847401 NA 3.2766158 9.4215193 10.0416478 10.5659785 11.6562029 9.1971838 10.4522569 6.7791192 11.2555330 14.3176255 7.2962775 8.6754638 11.4783921 11.0058343 3.5847461 5.1880804 8.2374476 11.5166145 NA 9.8906270 4.1322313 5.0937545 4.2062290 10.0410160 11.4173872 10.4565273 11.9035441 12.1829363 8.6672989 11.0713436 10.4393692 10.4384100 9.9677802 3.8843049 12.0174431 10.5747354 3.8384980 10.5380416 8.5899331 3.3437347 4.3105655 11.4448725 9.6557903 9.8165156 9.2051014 1.8842853 9.7258652 14.2101684 11.1569306 10.1783471 9.3701301 -0.557530 0.447820 0.462460 0.138650 0.138650 -0.645740 0.029483 -0.317860 -0.317860 0.031436 0.031436 0.025110 -0.218000 -0.218220 0.000000 0.000000 0.000000 0.126680 0.126680 -0.309090 0.024090 -0.333760 -0.031496 -0.031496 -0.031496 -0.054420 -0.054420 -0.054420 0.305850 -0.557530 -0.557530 -0.302750 0.138650 -0.674640 -0.645740 0.029483 0.041600 -0.317860 -0.317860 -0.317860 0.027919 0.027919 0.031436 0.114620 0.114620 0.114620 0.057455 -0.218220 -0.218220 0.000000 0.000000 0.000000 0.000000 0.126680 0.107890 0.107890 -0.309090 0.024090 -0.333760 -0.697790 -0.031496 -0.031496 0.032704 -0.054420 -0.054420 0.305850 0.039478 -0.367930 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 -0.135 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 -0.135 7.8983214 13.5208122 5.6524865 9.8297446 1.6604267 10.3821527 NA NA 8.4234597 9.3861380 -1.1155974 7.4767575 1.4692608 10.2604262 8.7956929 2.4692608 6.2593403 8.9624516 10.7020840 11.6713872 8.6203474 6.8209384 9.6656605 1.4692608 9.6582642 10.2067924 2.5847461 NA 10.5549571 1.2062056 13.4774001 11.8366781 7.7941942 9.9843061 8.0365858 9.8268154 3.1322313 1.2062056 -1.1155974 9.1880816 8.9108244 9.3021534 10.2931612 2.3437205 7.7782092 7.5602579 10.6896417 4.4692608 9.7821463 NA 12.7846960 2.2062369 1.2062056 9.9355642 7.4369697 NA 8.8399508 7.8150380 3.6916570 -1.1155974 14.2074964 -0.1157538 10.2140972 -1.1155974 8.6770910 3.6916570 7.8120791 9.4009857 12.791943 4.791189 7.920474 13.118145 9.910133 11.328280 13.418847 11.724095 9.248435 10.554072 13.093526 8.372141 8.237448 9.749261 NA 7.347825 11.241028 10.9211613 6.4842139 8.5063528 9.3478253 8.3126611 10.9558303 5.5707999 8.1393293 10.5540717 6.5063528 NA 5.1131212 4.9823320 10.0870369 10.4716096 8.9463469 8.5299591 11.4946337 4.4078626 9.6182568 10.5659785 10.9846346 10.4888541 10.4273326 9.1238995 10.7262583 8.5567264 NA 9.6167905 2.0542233 9.8906270 5.5136581 10.6001299 10.0410160 6.0441711 13.0789808 9.9644522 10.4753556 13.0718849 10.3766548 8.7546654 -0.1157538 TCGA-A2-A0CT 71 0 NA 2289 breast stage iia t2 n0 (i-) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 1 3 5 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699307e-06 6.935946e-07 9.8819734 10.1064644 11.1192643 9.1585802 9.5770436 8.0432789 8.9487971 8.8940674 9.5124466 14.4148708 11.9278969 10.2371380 2.3267387 13.8380860 4.7641497 8.0225531 8.1680473 8.5683312 9.4798748 12.9987284 -0.2582526 14.1982333 2.7417905 9.0547223 11.1141036 10.1442618 NA 9.2424951 9.0905108 2.5491270 10.2648545 7.0816326 3.4422269 3.6959827 9.2934910 10.4146499 9.4916521 9.7950297 9.4008865 10.2707250 NA 9.5958717 14.1000904 5.3055511 11.1519689 10.7696886 11.6383042 3.9897112 6.6959785 9.1211610 9.2124414 -1.2580801 10.6228966 10.0871878 4.3267459 4.4697037 10.3201553 11.7703794 9.8800544 10.0943778 12.5253948 8.5491374 11.1012577 10.7757493 11.0294950 10.2235821 4.6486725 11.4876670 12.0114937 -0.2582526 9.7254888 9.9359239 1.7417905 4.5231416 9.7800157 9.0849683 10.0190700 11.1143756 2.4422269 8.7710698 11.1598988 9.9693986 9.1764108 8.8305710 -0.3949700 0.6665200 0.7162200 0.3536500 -0.2617900 0.4643400 0.0389130 0.8297500 -0.8544800 1.6892000 1.6892000 1.6892000 -0.3861500 -0.3787600 0.8026700 2.2032000 -0.8541600 0.0203430 0.0203430 -0.8571000 0.0492560 -0.8560700 -0.8679800 0.7923900 0.7923900 0.1870700 0.1870700 0.2165300 2.1121000 -0.4121200 -0.3949700 -0.3788700 -0.8628000 0.4643400 0.4643400 0.0389130 0.0389130 -0.8730700 -0.8544800 -0.8633400 -0.9365100 -0.8968000 1.6892000 -0.4098100 -0.4098100 -0.4098100 -0.4098100 -0.3787600 -0.3787600 0.7837100 0.7145300 -0.8541600 -0.8555900 0.0203430 0.0203430 0.0203430 -0.8519400 0.0492560 -0.8560700 -0.8750400 -0.8760300 0.7923900 0.0583670 0.1337600 0.1870700 0.8213800 0.0080567 0.0000000 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 -0.126 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 -0.126 7.3229836 12.1478547 6.7970649 9.6486732 3.5083779 11.8221005 NA -0.2582526 9.3125871 8.9681947 -0.2582526 8.1102891 3.2012104 10.8905770 9.1596352 3.4966669 5.7075662 10.9621610 10.2886770 11.2697482 10.6269375 7.4106676 10.1638474 1.9116916 8.4474151 9.2925294 2.9117108 1.0637100 10.5366046 4.3856381 11.9038592 11.7283358 7.8581265 11.5380251 7.4071182 9.8997611 6.1511729 1.0637100 -0.2582526 4.2963693 9.3049789 10.0120779 10.9123336 3.5997582 7.7382281 6.8503069 9.8212674 7.4142083 10.2426245 NA 8.8371798 2.6486725 3.6486725 9.2309180 6.1713149 2.9117108 8.0838574 6.5231416 5.7530108 6.5033344 13.3850751 0.3267674 10.2896411 NA 7.6576622 4.9706006 8.8226001 8.4300331 14.508260 6.125488 9.097134 13.838086 8.837180 10.258960 12.998728 9.843758 8.195362 10.695979 12.743191 12.189512 9.121161 8.495000 2.549127 7.736136 11.563756 10.344018 7.545914 8.654672 8.807872 9.604420 10.013462 5.116822 6.701785 11.927897 6.980188 2.989702 4.624428 6.987336 12.646982 8.103726 8.784810 9.774517 12.601026 2.911711 11.201330 9.491652 10.682096 10.474798 10.643781 8.127645 10.337506 8.795709 -1.258080 7.537595 4.265347 10.622897 5.428283 9.607516 10.320155 7.418022 13.572347 9.862020 10.334707 11.966086 9.924177 9.045563 1.911692 TCGA-A2-A0CU 73 1 158 NA breast stage iia t2 n0 (i+) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 5 NA 3 5 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5.548757e-07 2.080784e-07 9.2127546 9.8876899 10.3612723 9.4422912 8.0288365 8.0806257 10.4828892 10.1394380 9.8553479 15.6149520 11.7569161 10.2201627 -0.3889221 13.6812307 3.0032964 9.4094556 7.6388898 8.6540112 9.0559987 12.5637252 0.1959775 13.9674359 2.4183519 8.8683719 11.3824734 7.4086456 NA 8.4705186 10.0585838 1.6109835 8.3079517 7.8253029 -1.3891110 4.3658745 10.1172915 10.7067106 6.8541578 11.1110789 9.5133591 11.1720332 4.0372504 10.6229100 14.4296410 7.9854583 10.8458014 10.7921362 12.0348877 6.1266838 6.5298475 8.9295268 11.1421217 NA 10.2842931 9.1404144 3.4183384 4.2256914 10.5031473 11.6335252 10.0922788 12.8008857 12.4766206 8.7632688 10.8562395 10.3248000 11.1486877 11.1686870 5.4311616 11.9740236 12.7071226 -1.3891110 10.6222112 9.5476218 3.1389291 3.9329116 9.8398026 9.7136157 10.7594606 10.9652333 4.1345495 7.2256933 12.6837865 10.2081053 11.0014216 9.4875008 0.11480000 0.11480000 0.24257000 0.00673880 -0.06906400 0.42478000 0.00000000 -0.46113000 -0.45494000 2.08620000 0.84840000 1.09910000 -0.44279000 -0.43512000 -0.04190200 -0.04190200 -0.04190200 0.46204000 0.00023271 -0.24377000 -0.43902000 0.01342700 -0.63798000 0.65600000 0.25254000 0.01119500 0.01119500 0.01119500 0.44842000 0.02672800 0.11480000 -0.33078000 0.00673880 0.47161000 0.42278000 0.00000000 0.00000000 -0.46113000 -0.45494000 -0.45436000 0.00104390 -0.00136570 -0.45727000 -0.43783000 -0.00131270 0.01747800 -0.45602000 -0.43512000 -0.44517000 -0.04190200 -0.04190200 0.01747300 0.01747300 0.43573000 0.00023271 0.00023271 -0.23942000 -0.43902000 0.01342700 -0.45249000 -1.26970000 0.65600000 -0.43631000 0.01119500 0.01119500 0.44842000 0.45250000 -0.44205000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.253 -0.432 -0.432 0.000 0.000 0.115 0.115 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.253 -0.432 -0.432 0.000 0.000 0.115 0.115 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 0.000 7.7530910 11.4817340 7.4844282 9.7136157 3.2582928 10.2593415 2.3114159 NA 8.3808216 7.7142716 0.1959775 7.5118507 5.1808401 10.7887149 9.1874684 4.4438718 9.5939776 9.7952395 8.0927836 9.5846813 9.8246107 7.5651805 11.8205896 2.7809190 9.9050303 10.1602873 5.6984463 1.1959775 11.2432976 3.4689612 12.0513341 11.9232997 8.7103319 9.9723795 6.4183384 9.3741964 6.4627329 0.6109835 -0.3889221 5.3389057 10.1404145 10.0554812 9.6737046 5.0704151 10.4258147 4.6553805 10.1452868 5.4689645 10.0770604 -1.3891110 11.1404145 -0.3889221 4.4183384 9.6536077 5.7207627 2.3114159 9.5186258 9.1365047 4.5651828 1.4183519 13.6729457 1.6109835 10.4871171 -1.3891110 7.1108299 6.3988873 8.7884035 8.3574983 15.1115680 6.7142716 9.0435258 13.6812307 9.5939776 10.1996986 12.5637252 13.6739576 8.9809193 10.8475961 12.4496955 10.2842931 8.9295268 8.9351645 0.1959775 7.2869412 12.8418300 10.6253531 6.1192545 8.6305747 9.1187786 9.5201270 9.5614743 5.5996689 8.6081635 11.7569161 5.8777712 3.1345495 11.0862107 7.9394123 9.7292763 10.1311115 8.9773063 9.5035268 12.1265606 4.3114232 12.4481398 6.8541578 10.2926616 9.4805778 11.7302493 9.5666339 10.4143079 9.7721158 0.9328927 9.0082415 4.7607319 10.2842931 5.2403410 9.9090466 10.5031473 7.2330358 13.3207678 10.5220014 9.1827365 12.4957268 9.6898018 9.2366928 2.1959460 TCGA-A2-A0CV 41 0 NA 3011 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 4 asian not hispanic or latino 2 2 3 NA 3 1 3 4 2 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.040392e-07 10.2100677 9.2533828 11.3483959 8.3528283 8.7242222 8.8522757 10.1330149 9.8718199 10.8066163 12.8608590 11.1889753 10.6002897 5.4159141 12.3764209 3.6885944 10.5393754 7.2411394 8.3452216 11.3588216 12.2709702 1.8972017 13.7179774 7.3840973 9.7071729 10.8585231 8.3791392 0.7817374 9.6729293 10.1520317 -1.8033930 8.8261016 7.6561767 -0.8031412 4.2628315 9.9768747 9.7656513 9.4517737 10.9325126 9.7222659 11.2931308 1.0041058 11.5870484 14.4987235 7.0602809 9.5933498 10.6500157 10.4725785 5.6643520 2.1036319 8.9748221 11.5571807 NA 11.2301681 4.4635309 6.3616526 5.1854305 9.6955942 11.6458937 10.5706977 12.9254096 12.3263501 8.2232686 11.0308210 10.5993228 10.5540221 10.8529464 4.0793866 12.0220020 10.5287816 -1.8033930 10.7845225 9.0032947 4.4061965 5.4351485 10.6321549 9.6381330 9.8522757 9.1385263 3.3260339 7.9246653 13.1926447 13.0977533 9.9785146 9.9495438 -0.01003700 0.67474000 0.70532000 0.36065000 0.37336000 -0.33491000 -0.00013862 -0.37865000 -0.35270000 0.36510000 0.36510000 0.36510000 -0.00443120 -0.00443120 0.00041593 0.00041593 0.00041593 0.00920860 0.00920860 -0.30451000 0.00597000 0.33157000 -0.37741000 -0.37741000 -0.37741000 -0.00553750 -0.02794500 -0.02794500 0.31900000 -0.01003700 -0.01003700 -0.33029000 0.36065000 -0.36409000 -0.33491000 0.01600600 0.01600600 -0.37865000 -0.35270000 -0.35270000 0.35638000 0.36559000 0.36510000 0.34486000 0.34486000 0.34486000 0.34486000 -0.00443120 -0.00443120 -0.00822910 0.00041593 0.00041593 0.00041593 0.00920860 0.01251600 -0.01392500 -0.30451000 0.00402430 0.34128000 -0.38795000 -0.37741000 -0.37741000 -0.00041585 -0.00553750 -0.02794500 0.31900000 0.01223700 -0.38973000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 0.000 8.7310478 13.0753229 7.8691706 10.1410911 3.3666719 10.6870946 2.7817164 0.5186358 8.7854597 8.5674325 0.1967329 7.6945968 2.8406042 9.6689282 9.3143882 0.1967329 9.1754555 9.5949544 11.5778824 10.4092415 9.4609121 7.2384038 10.7680237 3.7817059 10.4576646 9.8329164 5.7436388 NA 10.0816788 4.3666719 13.9606576 12.1779556 8.4505927 10.3186023 8.4635317 9.0057093 3.4821513 0.7817374 -0.8031412 8.5696099 8.2149451 9.2828813 10.8272397 3.9516344 8.0306153 6.6765255 9.8656300 6.0232931 9.5712413 -1.8033930 10.4749040 2.1967329 4.2411385 10.2596243 6.8793884 4.7203058 9.0562798 6.7854603 7.2079719 -1.8033930 14.3758183 0.1967329 10.4867639 NA 7.4134908 6.9075517 8.1882669 8.9474520 11.9446999 3.4821513 8.2397723 12.3764209 10.0979890 10.8689494 12.2709702 12.3589790 8.8923561 10.6543825 14.1635434 11.0101255 8.9748221 9.1319102 -0.8031412 7.2246510 12.0091229 11.3740089 6.7551653 9.4000930 8.9558010 6.5231746 10.3436382 6.9382117 7.1304357 11.1889753 7.5254198 4.8549581 9.3311713 6.2610023 11.4985270 10.6443449 8.8530001 8.5399308 10.8126045 5.7281273 10.7559955 9.4517737 10.6502729 9.7863962 10.7845225 10.0272602 10.7812378 8.4458587 -0.2182626 9.4660881 7.1825870 11.2301681 6.5141570 11.0790825 9.6955942 6.8226001 14.7164120 10.3588216 10.5512699 12.7821184 10.2861956 9.4780955 0.5186358 TCGA-A2-A0CW 67 0 NA 3283 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 1 4 NA 1 5 1 2 1 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.491228e-06 2.427581e-07 9.5880602 9.1207283 11.0747564 8.9791971 8.5912890 9.7241919 10.1113879 10.3200611 9.0814688 15.5505395 10.1982994 11.1809024 1.7860945 13.0433230 0.2011320 8.1406994 7.5431950 8.0324271 11.8185874 13.1221241 1.2011320 13.0838586 7.1926420 9.4017429 10.9995918 6.6969745 -1.7988680 11.6891660 9.8606700 -0.2139055 9.1876732 6.7049453 NA 3.0084690 9.8726610 9.3457782 9.5026162 10.9591350 9.8876205 11.1591289 9.5020445 11.5951807 14.1085975 8.1601513 9.5570215 10.8675659 10.6902153 1.6605636 6.8664555 9.0583235 10.1285276 3.1553121 10.6401717 4.7860840 5.4007907 5.5761593 9.4032439 11.5931691 10.4160462 11.4577710 13.3240289 8.1494870 10.7412480 9.7388237 11.4740413 10.4245184 3.1080058 11.2446600 9.8637884 -1.7988680 10.1091372 9.2819374 3.8173060 4.4679055 8.0868161 10.3606760 10.5578471 9.3915620 0.7860945 8.5060417 11.4552628 11.2822705 9.7509046 9.3050633 -0.34870000 -0.04061600 0.35055000 2.49370000 0.01070100 -0.34687000 0.00791750 0.00000000 0.00000000 0.07930300 0.07930300 0.99011000 -0.32077000 0.04599100 0.00402430 0.19497000 0.19497000 0.00069327 -0.00025232 -0.35202000 1.74040000 -0.32240000 -0.66049000 -0.30850000 0.02370600 -0.61844000 1.82880000 -0.03340500 3.65690000 -0.66022000 -0.34870000 -0.69396000 -0.68797000 -0.34687000 -0.35282000 0.00791750 0.00791750 0.00000000 0.00000000 -0.01188700 -0.68305000 0.25074000 -0.71720000 0.00847430 0.00847430 0.00847430 0.00847430 0.04599100 -0.66836000 0.00402430 0.19497000 -0.34159000 -0.34159000 -0.67949000 -0.00025232 -0.00025232 -0.66883000 -0.67830000 -0.32240000 0.04060900 -0.66049000 -0.64996000 -0.33641000 -0.61844000 -0.62950000 0.03976100 -0.70001000 -0.65318000 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 0.000 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 -0.117 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 0.000 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 -0.117 7.6869494 11.4102687 3.0590957 9.9430082 2.7986519 11.7413691 1.5230601 1.6605636 9.0324274 6.4442944 NA 7.4632145 0.5230601 11.0868163 8.8467785 3.9290430 6.3304024 9.1676254 8.3226533 10.4743328 9.6344237 8.2523291 9.9886145 0.2011320 7.3070286 9.2468798 1.5230601 4.1553202 10.6934740 1.3710570 12.4227826 12.2674615 6.6315729 9.6466521 10.6370507 10.8035869 3.6273850 2.6605408 -0.2139055 4.9015620 8.5185328 9.9967538 10.3106243 0.2011320 8.6879953 7.8928633 9.7222297 6.5320364 10.1531331 -1.7988680 9.4478606 2.5934255 2.3710570 10.2357848 6.8548609 3.2455109 9.0387478 7.4251219 6.3304024 -1.7988680 13.7253862 NA 11.2604644 NA 8.9058882 4.2011163 8.0791711 6.6482037 11.893309 9.433541 8.216535 13.043323 10.173741 11.112886 13.122124 11.637701 9.303096 10.879280 11.934135 9.474916 9.058324 10.142901 4.830478 8.131857 13.845314 11.0743718 7.1259321 8.5498482 9.6152767 8.9543368 10.8715284 6.2938762 10.7472910 10.1982994 6.3859952 NA 5.0340088 9.8698188 8.8259153 11.0108881 8.0371702 9.7397939 10.3825829 5.0591000 10.9490549 9.5026162 9.5481877 10.5561957 11.6038656 9.5515068 11.2836017 9.2372936 5.3909462 9.8281476 4.1080142 10.6401717 4.7557101 10.7128727 9.4032439 7.6949756 13.0034849 10.1362851 10.0917642 11.5441669 10.7229658 9.4853658 0.5230601 TCGA-A2-A0CX 52 0 NA 1728 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 3 NA 1 6 2 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.959201e-06 1.560588e-06 9.5159280 9.4205902 11.2992242 9.0341552 8.7243924 9.5766657 9.3844563 9.8157370 11.6150396 14.2177437 9.4983243 10.4636963 -1.3090019 16.6767001 2.3914103 9.0811383 5.1828234 8.4902508 7.8906419 12.6721799 NA 12.2468766 -0.3090019 9.2513023 10.4047854 7.2066696 0.6909981 12.9437087 11.5580550 2.6909757 8.8073134 7.0263597 -1.3090019 4.8608933 9.8992037 10.0529132 9.3121056 10.2796840 9.7374113 10.7820742 3.3348257 10.8508407 15.1454775 7.4944548 9.8521012 10.7893305 12.2284305 7.4324367 4.3633954 8.8608942 10.2056834 0.6909981 10.8397637 7.6711086 6.1172337 5.1828234 10.0207657 11.6782334 9.6560320 11.2240557 12.4588435 8.5427185 10.8838786 10.0149023 10.6440746 10.6990478 4.9763728 11.8459456 9.2899522 NA 10.3157648 9.7223260 2.6007455 5.6682496 10.8137974 9.7909746 10.0567450 10.0881091 4.9197882 7.9197882 13.0265691 12.7267994 10.0179606 9.4566698 -0.3812300 1.3708000 1.3708000 1.4534000 0.3795700 -0.0077482 1.4514000 3.6084000 0.0133530 -0.0052610 0.8870000 1.6736000 -0.0080244 0.0048417 -0.2306700 -0.2306700 -0.2306700 0.3580600 0.3541500 -0.1827000 -0.0231550 -0.3621500 -0.4551100 3.6569000 1.6969000 -0.0047079 -0.0047079 -0.0047079 0.3181900 -0.3556700 -0.3812300 0.0416000 -0.3729000 0.0000000 -0.0077482 -0.3765100 -0.3765100 -0.0239710 0.7470800 -0.7596000 0.0225850 0.0225850 -0.0052610 -0.0016629 -0.0016629 -0.0016629 -0.0016629 0.0048417 0.0048417 -0.2306700 -0.2306700 -0.2306700 -0.2306700 0.3580600 0.3541500 0.3541500 -0.1827000 -0.0231550 -0.3747100 -0.3624900 -0.3648800 -0.3442300 -0.0299940 -0.0047079 -0.0047079 0.3181900 -0.0469890 0.3673900 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 0.107 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 0.107 8.2608250 13.6482528 4.3056787 9.2749924 3.9388974 11.1793117 0.2759606 0.6909981 8.7202566 8.5888147 -1.3090019 8.7257684 3.5978648 10.7952405 9.3633947 2.5978648 6.0918479 9.0854321 9.8073134 10.4159095 9.7962887 6.7570579 11.3800938 1.4983019 5.2301300 10.1040684 2.1503972 1.6909534 11.4370637 NA 12.8413513 12.5606596 7.7271431 9.9442260 9.3536378 9.7000981 6.0918479 2.7784399 -0.3090019 4.9197882 8.7435375 9.3844563 8.7929451 3.2145290 9.2260600 6.7570579 9.7657799 6.5797127 9.4366437 0.2759606 10.9173816 3.8202505 3.2145290 9.6053471 6.8710773 4.3056787 9.2066691 8.8007999 6.5047507 7.4491924 13.8838786 -1.3090019 10.2056834 NA 8.6581958 5.5857858 7.9947500 8.3983286 11.1900055 7.7021969 8.1585749 16.6767001 9.9845905 11.2120790 12.6721799 8.8646464 8.7916318 10.5139385 13.2265485 11.6079684 8.8608942 11.0509934 -0.3090019 9.0627461 11.7295455 11.435173 7.778432 8.354528 9.520692 8.316678 10.957861 6.548950 5.214533 9.498324 6.696593 6.905288 9.849579 7.341698 10.863709 10.543499 8.133913 9.111982 9.439162 4.757061 9.883916 9.312106 10.464521 10.073593 9.720257 9.457498 10.704990 8.757059 3.820250 8.737971 5.985589 10.839764 8.418890 10.630916 10.020766 7.342021 13.311647 9.793601 10.331214 12.058930 10.711949 9.126640 1.498302 TCGA-A2-A0CY 63 0 NA 1673 breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 4 3 NA NA 1 5 2 2 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1273206 8.3861259 11.8045510 6.9470653 9.0592257 8.0641979 9.6524653 10.7559573 12.2423714 13.6967594 10.6380881 11.1336414 NA 12.1965029 2.6179332 9.1415036 6.7389569 10.2882437 6.7138662 13.1626162 1.2960168 11.7603039 6.3621034 10.0239338 10.6151210 6.5151826 -0.7039244 6.1161921 12.8648008 7.4558845 7.5391875 6.6447417 NA 4.3404056 8.9488584 10.5598694 8.7513405 7.9929808 9.8380780 10.2443806 1.2960168 10.4802689 14.3874901 8.4224597 9.9380651 10.4207809 11.6880624 3.6179449 2.8809793 8.7656551 9.9955858 0.2959581 11.3914104 2.9964611 3.6179449 2.2960168 10.0475575 12.3016379 9.2297040 12.4525705 12.7728862 8.7180780 11.2729354 10.5157869 10.0525697 10.6408641 3.6179449 12.4251354 9.3431373 5.3834762 10.3533283 8.9999169 3.4715387 2.9964611 11.4684409 10.7863629 10.2567394 9.6224428 3.8809793 9.8342024 13.5570799 10.5575207 10.3641199 12.2366940 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.6358632 13.3857949 7.1908311 8.5767840 NA 11.8259319 2.4659484 -0.7039244 8.6469525 8.7368825 0.8809597 9.6410527 5.1539958 10.0822831 10.7451620 4.8195762 1.8809597 9.8448354 10.5860322 10.0458828 8.1024986 6.2502093 10.3594085 0.4976379 8.6623355 9.8244675 2.4659484 -0.7039244 10.6672455 6.2846973 14.3681041 13.1951815 6.2385270 9.0625424 5.5054654 10.4278703 4.9684410 1.2960168 NA 0.2959581 8.9702057 11.1629059 9.1049777 -0.7039244 9.8801115 7.2732930 10.0500658 6.1289037 9.3714927 NA 11.2900132 0.2959581 5.9107231 9.3598534 6.4902781 2.1033634 8.9125621 5.8351712 4.4252982 4.9684410 15.0741932 1.2960168 11.1919673 NA 9.1953702 4.1539917 9.0050973 9.8254440 12.840869 7.470939 8.907038 12.196503 10.246569 10.834687 13.162616 12.026908 9.332187 9.941672 13.833778 12.476700 8.765655 9.743097 7.539188 7.345862 12.772380 10.397333 6.505467 9.316993 9.991242 7.037480 9.672410 5.273292 6.141504 10.638088 5.077371 NA 10.883791 9.353937 10.060056 9.840012 7.166378 9.153994 5.755446 3.296017 11.973378 8.751341 9.822513 10.897784 10.870134 9.509118 10.282567 7.771747 7.622443 9.430838 4.050902 11.391410 6.553402 10.591782 10.047557 7.662336 15.454663 10.011975 9.885664 11.886133 11.499973 9.460920 1.617957 TCGA-A2-A0CZ 46 0 NA 1616 breast stage iia t2 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 NA NA 2 4 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 2.427581e-07 6.935946e-08 10.0818955 9.3982347 11.4825199 9.0368278 8.4033163 8.7043979 10.0150831 9.7513847 10.9811595 12.4507203 10.6090908 10.3684026 1.5145515 12.7036770 3.6300559 10.4726425 6.2333915 8.5534922 10.3772105 12.0780872 -0.6590390 13.7815061 6.0588944 10.4327606 10.0137546 7.5662352 -1.0703605 11.8634857 8.9903065 4.7369674 9.0498485 7.6161114 2.5145768 5.4053457 9.3133150 9.5770691 9.5461594 10.5364785 9.1975679 10.7660556 11.7597297 9.4994662 15.3915377 7.1486820 12.0757020 10.9253778 10.8447431 5.2515373 7.3766941 8.7922479 11.4920916 NA 11.1234440 7.6438562 6.8365011 5.5734654 10.0875891 11.7509861 10.7945706 12.7020283 12.4058506 8.4937602 10.7043977 10.5580061 10.7644767 11.1160345 4.7875892 11.6029198 10.4985169 0.9296395 10.5239353 8.5070394 4.2875166 5.4053457 11.2560402 9.8395038 11.6035822 10.1511978 4.0995393 8.3068214 13.1958885 12.2929241 10.0276427 10.1864091 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.480357 15.201438 7.300298 10.838754 4.871420 11.241643 2.630056 1.736951 8.781360 9.674445 0.514602 8.741290 4.684499 10.028301 9.131735 3.736962 9.934533 9.656680 9.432443 9.719144 9.258252 7.224231 11.664744 3.929611 8.143930 10.325145 5.421462 NA 11.143019 3.684493 13.138759 12.606339 8.623098 10.449738 8.109520 9.610849 4.573465 1.736951 NA 1.736951 8.834998 10.058894 9.302476 6.730511 8.349213 6.186998 10.375143 5.762500 9.909036 NA 12.749391 3.321928 6.710970 9.590747 4.790824 6.027643 9.995027 8.998389 9.711790 1.736951 14.028465 1.929602 10.649000 0.514602 9.210382 5.918296 7.960278 9.537865 12.661848 4.287162 8.587822 12.703677 10.598939 9.811489 12.078087 13.000654 9.119435 10.287163 13.051792 11.213567 8.792248 8.610849 NA 8.466829 10.636107 11.561924 6.429457 8.764082 9.076816 6.768814 10.274495 7.584247 8.417451 10.609091 6.895395 3.630056 7.623098 5.137504 12.222795 10.691577 8.728892 8.848474 10.343239 7.330490 10.904438 9.546159 10.516450 10.165625 10.778234 10.431945 10.653698 8.360063 NA 9.402251 8.217323 11.123444 8.682827 10.795730 10.087589 6.974005 14.906846 10.224231 10.303563 12.567028 10.665167 9.467800 1.929602 TCGA-A2-A0D0 60 0 NA 2048 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 5.548757e-07 7.4917208 7.5178930 10.7666735 8.0466613 7.7202313 8.6494901 9.1652464 11.3786662 10.6645776 11.7284851 9.6561333 10.7223433 NA 11.2993118 2.1796703 9.5507468 6.3855674 8.2300065 7.1168367 5.5015920 NA 9.1285612 7.3349418 10.0217278 10.3966295 5.1296210 2.8901548 13.1568130 12.7010852 NA 7.7453711 9.1908904 NA 1.3052118 8.4171989 10.4867605 9.1443980 7.8976513 8.3089460 10.9469448 -1.2796340 5.2280260 14.3349127 6.4583918 9.9478476 10.1719579 10.6531845 2.9681645 -0.2798091 8.9986810 12.1417705 NA 10.6383494 6.9345507 5.3201453 4.3926540 9.4900695 12.3595723 10.3604765 11.0639725 12.5841274 7.2976601 10.5475743 9.4958418 10.6737006 10.7138777 3.6271165 11.8259764 8.8103441 NA 10.7819403 10.0427231 3.0421540 3.5275833 8.3220025 10.2757794 10.3833449 9.1221778 0.3052118 6.8951572 9.2593904 13.7582503 10.4490024 10.2235605 0.381380 1.508400 1.860800 -0.303340 1.753900 -0.014916 3.375900 1.088300 1.021800 0.250740 0.250740 2.824200 0.240930 -0.270090 -0.274640 -0.312130 0.880260 1.475500 0.359040 0.313060 -0.224040 0.260280 -0.302980 -0.302980 -0.288340 0.083198 0.083198 0.171510 3.030100 -0.291300 0.381380 -0.443010 -0.269570 -0.181240 -0.925850 -0.903050 -0.889740 -0.556770 0.000000 1.469400 -0.952540 0.998230 -0.445450 0.308730 -0.234470 -0.253940 0.181090 -0.270090 -0.351040 -0.274640 0.484750 0.385670 0.389490 0.356590 0.289450 0.961030 -0.235450 -1.292900 -0.325650 -0.323010 -0.302980 -0.302980 -0.322750 -0.155030 0.181770 -0.286320 -0.248000 -0.390560 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 -0.040 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.169 0.169 0.332 0.332 0.991 0.991 -0.248 -0.377 0.845 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 -0.279 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 -0.040 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.169 0.169 0.332 0.332 0.991 0.991 -0.248 -0.377 0.845 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 -0.279 7.2000119 11.8449991 -1.2796340 8.4154600 0.3195023 12.2160866 -0.2798091 3.0421540 9.5404105 8.5211316 NA 7.8520888 6.2824732 11.0547842 9.4404757 6.0148529 3.4751238 10.4579014 9.7970472 8.9381893 8.5920137 5.7646248 11.0797066 2.3051826 8.4258638 9.8970280 5.0240138 NA 10.6017280 NA 14.7822566 13.7017097 5.8699775 8.4867606 10.2065639 11.0182942 4.0056335 0.7201909 NA 2.0421540 9.0909190 9.9675658 6.1631747 -0.2798091 8.7647625 5.6975125 9.8520886 2.1796703 9.0410321 1.3052118 12.4004812 -1.2796340 3.9681553 10.1028069 7.4146937 1.0421540 8.2240572 7.0600820 4.4206710 4.3349401 14.7523204 NA 11.2938788 NA 11.9962106 5.9776188 7.9846742 7.7370398 11.639099 9.696080 7.902626 11.299312 10.012553 12.400811 5.501592 10.697154 8.972897 10.085460 13.428992 11.746236 8.998681 9.082175 2.305183 7.055622 11.522950 11.1491151 4.6271224 8.0799812 9.9574415 8.9149884 10.2598993 5.9199049 5.4067305 9.6561333 10.5435988 NA 10.5531216 8.6807115 10.6089748 10.1023151 7.6831273 9.7474465 5.2280260 5.0600820 9.4551951 9.1443980 9.9229676 10.5479713 12.1603221 10.1842668 11.2841428 8.5048662 NA 9.2937273 3.8901548 10.6383494 3.8076949 11.0205842 9.4900695 7.4313823 15.2409423 10.7656499 11.1290920 11.8813635 11.6231719 9.1422963 -0.2798091 TCGA-A2-A0D1 76 0 NA 1051 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 4 NA 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.710324e-07 5.895554e-07 8.49081478 10.58934310 12.18543258 8.51515695 7.99819437 9.68817319 10.56309128 10.44281663 9.95709696 14.32085300 6.94129180 10.84744546 2.08331550 16.38862075 2.49835300 8.01667404 5.54274403 8.99153687 4.84412449 13.14002402 -0.08666057 13.54291344 5.27093628 9.50864356 11.71630624 5.66827233 0.49835300 7.20340478 10.53498010 3.72073813 10.44037421 5.43694802 NA 4.33965051 9.49834861 9.78066476 8.69638442 8.90632453 8.47180688 11.37920750 15.67089326 8.88780062 15.22584362 6.09756655 10.60948424 9.76981157 9.80896128 6.64809581 1.72076001 7.42908615 11.55498626 0.49835300 11.17077390 3.66827800 3.49835300 4.16131533 9.17077384 11.97391311 9.58757839 10.75219605 12.60654628 6.39720228 11.18368140 10.01141820 11.12405738 11.29870923 3.91338731 11.84116403 12.25643292 NA 10.23136388 10.51608490 4.27199332 2.08331550 9.10567886 8.64809581 10.06186258 9.88061237 1.23529817 6.26211364 12.75377061 10.21545376 10.02712820 9.66073987 0.0045026 0.0070798 0.0079865 0.0274260 0.0181730 0.0075690 -0.0007629 0.0494680 0.0494680 2.2148000 2.9890000 2.0013000 0.0000000 0.0000000 -0.8129800 0.0127240 0.0127240 0.0106330 -0.7887900 -0.8053000 0.0163550 -0.0018712 -0.8057100 3.6569000 -0.7605100 0.7494600 -0.7932300 0.0285510 -0.0029789 0.0204120 0.0045026 -0.0069891 -0.8093500 0.0202720 -0.0100670 -0.3872200 -0.3872200 0.0494680 0.0494680 0.0494680 -0.8297200 0.0317880 -0.8244400 -0.0323830 -0.0323830 -0.0323830 -0.8102600 0.0000000 0.0039543 -0.8129800 0.0127240 0.0127240 0.0127240 0.0106330 -0.7999900 -0.8353900 -0.8053000 0.0163550 -0.0018712 -1.2721000 -0.8057100 -0.7750900 0.0291140 0.7494600 -0.7947500 -0.0029789 0.0188720 0.0134220 0.000 0.000 -0.813 0.000 -0.789 -0.789 -0.805 0.000 0.000 0.000 -0.399 -0.761 -0.761 -0.820 0.000 0.697 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.807 0.000 0.000 -0.162 -0.162 0.000 0.000 -0.813 0.000 -0.789 -0.789 -0.805 0.000 0.000 0.000 -0.399 -0.761 -0.761 -0.820 0.000 0.697 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.807 0.000 0.000 -0.162 -0.162 7.53909521 13.61588344 3.16130726 8.70780188 3.48990254 12.85177110 1.91337773 -0.08666057 8.84707677 10.25823671 NA 6.91901108 4.69474650 10.76786489 9.99885850 4.97947664 4.16131533 9.10321069 11.79545588 10.57471878 9.37229505 7.11795680 11.33965078 NA 6.21716672 10.26266723 1.49835300 NA 11.84541623 3.23531349 13.69418210 13.39221886 7.52809618 10.20282859 7.59286587 9.26873708 3.16130726 1.49835300 -0.08666057 NA 9.57872195 10.94955966 11.27615180 -1.08650737 10.00571380 7.94129180 9.78606097 6.82627518 9.12405745 NA 11.34017496 2.82028110 4.27094001 9.48830110 6.39720228 3.37281283 7.98216421 6.04266841 7.45641767 3.37281283 13.53549508 -0.08666057 10.64724875 NA 9.14940012 3.95778462 7.65485295 5.48324181 12.175499 6.083311 9.284073 16.388621 8.864671 10.518402 13.140024 7.360470 9.479440 10.348014 11.987695 7.078293 7.429086 6.032328 0.913416 6.984848 11.152686 10.980148 8.055493 8.403234 11.052937 8.090806 10.151044 4.641309 6.542742 6.941292 4.668272 -1.086507 9.869762 7.406081 12.500460 9.276426 6.739934 9.758092 6.613826 5.042671 11.389641 8.696384 10.240377 10.857732 11.280255 9.433022 10.001512 8.707802 11.339126 9.226292 6.217167 11.170774 6.170774 11.340437 9.170774 7.413232 14.994557 10.276426 9.998858 11.062498 12.554986 8.507711 1.913378 TCGA-A2-A0D2 45 0 NA 1027 breast stage iia t2 n0 (i+) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.907385e-06 5.895554e-07 9.3985759 8.9488884 10.9372418 8.0798048 7.6595015 7.9777327 8.5110110 11.1856988 11.9711069 12.8660296 9.8126253 10.8992159 1.7340484 11.7373134 1.1490642 10.2641109 6.3256562 8.6301939 10.2457824 6.4033086 NA 10.3122976 7.8402291 9.5857441 9.9887960 4.7340321 0.1491293 10.2245420 11.8223763 1.3714473 8.8927796 8.2988145 NA 4.3969952 9.4520870 9.4329273 9.2007294 9.4313835 9.1481278 10.8355678 1.5640855 8.7377821 15.6267412 8.4355328 9.3914475 10.4863175 10.4944725 2.7340267 NA 8.9872208 11.1382252 NA 8.9072906 5.3454638 6.2079612 4.5413847 9.0539528 12.4608156 9.7144868 10.7594769 12.3026193 6.2079612 11.5683252 10.9163938 10.4501823 10.5172099 4.3454673 12.0082137 7.0915814 3.9564191 10.8480612 9.8506626 3.5196929 5.5641037 9.3511910 10.7343428 10.6885492 9.3577081 -1.4359633 4.9903695 12.6128471 12.1595954 9.9342473 9.4390862 0.642680 0.581480 1.094100 -0.011060 0.601600 -0.033132 0.535030 0.564360 0.615520 0.450030 0.450030 0.581120 1.122100 -0.061555 2.777300 0.592420 -0.025620 0.532220 -0.017565 1.130500 -0.041567 0.568450 -0.077745 -0.077745 0.121670 0.525900 0.525900 0.772720 0.692230 -0.085457 0.632440 -0.054420 -0.027671 -0.089567 -0.036401 -0.031496 -0.018904 0.564360 0.615520 -0.072007 -0.063435 0.975230 -0.072541 -0.049289 -0.041024 -0.041024 -0.080674 -0.020824 -0.135490 -0.060211 0.564180 0.575050 -0.091155 -0.030221 -0.035857 -0.039529 -0.041838 -0.049154 0.506370 1.418600 -0.077745 0.121670 1.156900 -0.057654 0.567920 0.361490 0.587930 0.466390 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.530 0.530 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 0.212 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.530 0.530 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 0.212 8.2558481 13.9369698 1.3714473 10.3189923 3.5641098 11.9668504 2.7340267 3.7340267 10.9072904 8.2025407 1.8860428 7.3223284 1.3714473 10.7433919 9.6908092 2.2645364 8.2025407 10.4367796 7.6752401 9.3322890 8.2636424 7.3842838 12.8210505 2.4710053 8.3568952 10.5417425 2.7340267 NA 10.6359023 2.0235392 13.5803907 12.1234818 7.2294408 9.6429226 8.9391443 10.7205039 1.1490642 2.9564284 NA NA 8.9006114 9.4205302 6.1339601 4.1490642 7.6391294 2.8120258 10.0357799 7.0438847 9.7643904 6.4649721 12.0086021 2.2645364 3.3189964 10.8834777 7.2529492 5.9903695 9.0619565 8.5284455 8.1695843 4.9903695 13.2323804 -0.4359633 12.0582103 NA 9.9089555 3.4220850 7.9194557 6.7539294 11.431190 8.813218 7.572533 11.737313 10.206608 11.631707 6.403309 10.854124 8.519755 10.880103 12.809732 11.365005 8.987221 8.458922 1.564085 7.923855 10.734969 10.834984 6.352008 8.702377 9.187072 6.318993 9.376090 7.071900 5.458923 9.812625 9.718290 -1.435963 9.493363 11.427176 12.032474 10.126824 7.990369 9.043885 7.928239 7.122526 10.433864 9.200729 9.652230 10.422863 10.646587 10.334769 10.535648 9.300507 -1.435963 9.959842 8.093535 8.907291 6.031711 10.264111 9.053953 8.078030 14.818266 10.280496 10.037810 12.595289 11.034764 8.654217 1.564085 TCGA-A2-A0D3 42 0 NA 1873 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 3 1 1 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 11.0088598 9.6996299 12.2858971 9.6449025 8.5382107 9.8573834 10.4528383 8.3642135 9.6501223 13.2112002 10.9805932 10.3603261 2.5369481 13.3740611 5.4438486 8.7817190 8.0234589 8.0018450 11.0650874 13.1896047 2.0674666 14.4549317 3.6149571 9.7792226 11.2675233 5.7333571 -1.6330764 10.3208665 9.7129934 2.2739336 9.0438724 6.9780583 -0.6330764 3.3670355 9.5970544 10.9973010 10.6297160 11.7896243 10.7614965 11.2162435 -1.6330764 12.1502368 15.0934383 8.1766733 9.6267771 11.6871292 11.3197751 5.1219230 4.3670355 8.7366313 11.0576867 NA 10.8901057 4.8588861 5.8905950 3.4963217 10.3099149 11.9995747 10.8810082 13.5149145 13.0104955 7.0429912 11.1782078 10.9441913 11.3654480 11.3371398 5.1872135 12.2164390 10.5309979 NA 9.9701965 9.9425732 4.0414357 5.8264646 11.8067349 10.6084213 10.1553443 10.6527251 1.1744064 10.7593513 13.6289084 11.5498938 10.3624478 9.8538689 1.12340000 1.65410000 1.65410000 0.00110930 0.00110930 -0.03558500 -0.00235530 -0.00526100 -0.00526100 0.62087000 0.60100000 0.60100000 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00290910 -0.00235530 -0.00235530 0.00291330 0.00166420 0.00055459 -0.00415460 -0.00415460 -0.00415460 -0.00443120 -0.00443120 -0.00443120 0.00138680 0.00000000 -0.00622860 -0.00193990 0.00110930 -0.03558500 -0.04140200 -0.00235530 -0.00235530 -0.00526100 -0.00526100 -0.06037400 0.02034300 0.01788100 0.64030000 0.00152550 -0.00100150 -0.00413860 0.00249690 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00235530 -0.00235530 -0.00235530 -0.00139800 0.00166420 0.00055459 -0.68468000 -0.00415460 -0.00415460 0.00958830 -0.00443120 -0.00443120 0.00138680 0.00268770 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 0.000 8.2588176 11.1436726 7.7743015 8.7838315 4.5167779 10.6414120 2.8264570 -0.6330764 8.3241360 5.4650668 NA 6.9594908 1.1744064 10.4418444 9.3789600 -0.0479647 8.4505131 9.1343906 9.1999238 10.9648537 9.7212446 7.4331230 9.4872717 1.8264773 9.2085982 9.6454834 9.9701965 -0.6330764 10.1646954 2.6889636 13.1491619 11.9711237 6.5014598 10.2851517 7.2648798 9.2881310 2.0674666 2.3670355 -0.0479647 6.6934633 8.6878344 9.4243488 10.5278507 3.0674666 7.7102637 6.5519097 10.6748039 6.5862018 9.0622621 NA 9.8503458 2.2739336 3.7245848 10.2210334 6.1951074 5.3443137 7.7507385 7.0983532 6.3036712 -1.6330764 14.2829133 -0.0479647 9.8528631 -0.6330764 8.8777979 4.9669472 7.5862025 8.7135477 11.523100 3.411426 9.231220 13.374061 10.619995 11.743295 13.189605 12.350651 9.750738 10.766846 13.747799 10.653592 8.736631 8.786994 -1.633076 7.218783 11.903524 11.2601458 7.0000293 9.6460640 8.9632235 7.6196991 10.3420793 6.4059532 7.9799024 10.9805932 4.6338206 1.8264773 5.2496767 4.8874570 11.6052893 10.7146553 9.2556553 7.6912145 12.2920319 5.9890868 10.0929113 10.6297160 10.5428953 9.9683404 11.0341454 9.2799232 11.1013201 9.5916385 1.1744064 9.5733461 6.8182447 10.8901057 5.5862033 10.4932543 10.3099149 7.8182447 14.2278056 9.9548114 10.5094601 13.3270811 11.0352540 10.0889875 0.3670355 TCGA-A2-A0D4 37 0 NA 767 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino 3 1 1 NA 3 5 1 4 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 9.15355836 9.76679457 12.09224570 8.97348069 8.56555757 9.54924406 10.62902642 9.01639185 8.62026822 14.23889695 10.83356802 10.68422860 4.06812045 13.29146796 3.17830033 8.87465436 5.37623828 8.43291224 8.50657933 13.03810917 2.26074833 13.46933558 0.67581593 9.56806461 11.46940332 5.87874005 1.67581593 6.95811651 10.70462699 1.41278153 8.36812489 5.45716087 NA 3.58268846 9.45223300 9.86191428 9.71105725 10.12219410 9.45113588 10.42427244 5.69074951 10.47508164 14.26825704 8.29463821 10.68679429 10.90401745 10.67603481 4.50022843 6.93946050 8.77207600 11.00148026 -0.32427438 9.93436611 12.39689920 2.94882508 3.84572086 7.60653698 12.22357821 10.09189378 11.39104705 12.89355580 8.35410654 11.09206978 10.44430419 11.95589411 10.96601091 4.72019637 11.18475022 9.88687704 0.09085343 10.16765310 9.77031767 2.41348577 2.55026042 10.17763717 9.77383203 10.25700060 11.04029952 0.89816965 8.13796147 10.16698502 10.35058078 10.35116904 9.26263986 -0.314970 0.417700 0.417700 -0.798920 0.058128 0.032186 0.089753 -0.340750 -0.390480 0.714780 1.831000 2.980200 -0.267890 -0.718770 0.069936 1.072300 -0.803670 -0.760690 0.071725 -0.807460 0.882120 0.101700 -0.738510 0.148950 1.010100 -0.711910 0.099044 0.175030 0.137810 -0.314970 -0.314970 0.086243 -0.776400 0.073880 0.051718 0.000000 0.000000 -0.340750 -0.390480 -0.346950 -0.329550 -0.340400 -0.822650 0.039640 0.039640 0.081369 0.173970 -0.718770 -0.718770 0.971170 -0.737190 -0.803670 -0.779070 -0.760690 0.071725 0.148650 -0.809530 -0.763440 -0.778200 -0.748810 -0.739960 0.148950 0.076613 -0.701960 0.175030 0.137810 0.088305 -0.338330 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.980 0.000 0.000 -0.149 -0.149 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.980 0.000 0.000 -0.149 -0.149 7.30029124 11.06578979 3.30028483 9.21301841 2.16979676 12.02600257 0.89816965 NA 8.76326284 6.48315473 -1.90941752 7.01731175 1.89820835 11.42776240 8.83483034 1.41278153 6.11874386 9.05517830 7.04503335 10.43513340 9.25254268 7.67203774 11.00653016 1.55026042 8.45497205 9.98110172 4.19935825 0.09085343 10.77405144 -1.90941752 11.60345453 12.17979134 6.56657164 10.31845344 6.69446376 9.95231216 0.67581593 2.89818900 0.09085343 2.61440361 8.14340566 9.60456509 9.64110325 3.84572086 7.12147757 7.13523113 10.04939022 5.43068671 10.23390184 0.09085343 8.91818018 5.25070772 3.94881574 10.04586612 6.53427798 0.67581593 9.33935811 8.51815034 5.50022843 -1.90941752 13.80990541 -0.90914657 10.47400177 NA 8.44067154 5.19936218 8.32565490 6.24565538 14.94607258 5.64542499 8.71197355 13.29146796 9.96735452 10.50789888 13.03810917 13.37858595 8.59962279 9.64877981 12.17738842 10.49651088 8.77207600 10.40230201 0.09085343 8.22654658 11.52285734 11.000543 6.156926 8.502349 5.566572 9.906621 10.763870 3.517099 5.483155 10.833568 7.677677 3.948816 6.862327 7.482597 9.408815 9.973481 7.487442 10.846768 12.086340 2.338767 13.652704 9.711057 9.934759 9.475082 11.737284 8.779088 10.928860 8.783453 2.178300 8.661907 3.135239 9.934366 3.997726 11.301661 7.606537 7.759722 13.004335 10.597641 9.696317 12.059324 9.231028 9.944537 3.090836 TCGA-A2-A0EM 73 0 NA 3094 breast stage ia t1 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 2 NA NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 0 10.6249693 9.8572918 11.8704873 9.7109238 8.0647735 9.0599820 10.0323628 9.4857778 9.6875050 13.2945102 10.8018346 10.4964567 2.2067995 12.7960834 3.9982045 8.9982057 6.1210631 7.6304739 10.3651107 13.3639936 3.3137102 13.8133044 6.9616800 9.2860721 10.3344892 4.6148747 NA 8.6875048 10.2528670 2.7542889 8.3828695 7.9962006 NA 3.5507529 9.7853828 10.5741231 11.7162629 11.8094199 10.1897860 11.1048705 7.1465972 11.5519417 14.9014516 6.5111343 9.6076719 11.6465434 11.7644770 4.3392443 -1.4937027 8.5245527 10.8658277 -0.4937027 11.2840190 4.4605460 4.6961775 4.1502103 10.6142236 11.7262774 10.3836368 12.6825258 12.8183847 8.8550809 11.7052581 11.3586325 11.6419016 11.1627775 5.1645651 12.1931814 11.0611813 1.9657658 10.0503511 8.8975962 2.7633691 4.5724410 11.0352951 10.1067302 10.1823097 10.0401690 2.0913275 8.4750196 12.0145188 11.6340246 10.3581017 9.6446244 -0.00995650 1.19450000 1.19450000 0.00194180 0.00089236 0.00903120 0.00346870 0.00013863 0.00013863 0.00000000 0.00000000 0.00000000 0.00138680 0.00138680 -0.00317950 -0.00317950 -0.00193990 -0.00456950 -0.00456950 0.00305220 -0.00221680 -0.01271300 -0.01711600 -0.01711600 -0.01711600 -0.02109800 -0.02109800 -0.02109800 -0.01550400 -0.00995650 -0.00995650 -0.00360110 0.00194180 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8.70479763 8.22059840 NA 6.91998119 0.82830661 10.30846509 8.78944105 1.09132748 6.65101150 9.36511072 12.21468218 9.76432973 9.69689956 7.00220744 10.88951689 2.73593370 9.44813386 9.82433047 2.67626741 NA 10.31692432 2.59380790 12.83929830 11.99808053 8.54389950 10.60207935 7.19635032 9.25286692 4.28770869 0.09125977 -1.49370273 2.41324203 9.71153500 9.85563393 10.88356316 3.82827614 6.72067247 5.63563542 10.58949957 6.65101150 9.53356763 NA 11.61976926 0.82830661 4.91574556 9.91601408 6.70597652 1.96576582 9.27288168 7.90081550 4.59381388 NA 13.91209247 0.09125977 10.16367106 NA 9.25202696 5.15021033 7.86610248 9.29751564 13.198916 5.121061 8.203320 12.796083 9.780294 11.202233 13.363994 13.153811 9.492195 10.848149 13.536502 9.815829 8.524553 9.950850 -1.493703 7.139348 11.409670 10.891676 8.059022 9.160989 9.301581 8.189225 10.233912 6.171689 6.604384 10.801835 6.234273 3.460546 10.316523 5.446402 11.868844 10.230014 7.511977 8.523161 13.821821 4.029912 10.341389 11.716263 10.368603 9.680654 11.414558 9.142977 10.533568 9.503532 NA 9.389149 2.965784 11.284019 7.874859 9.975399 10.614224 7.317117 14.109573 10.310484 10.484706 12.668665 9.944105 9.633702 1.965766 TCGA-A2-A0EN 70 0 NA 2718 breast stage iia t2 n0 (i+) m0 female 2003 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 2 4 NA NA 3 4 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 9.9790278 10.1434873 11.2472851 9.5570499 8.2423772 9.3463112 9.4750713 10.0495072 10.4033591 8.8712409 10.2692639 10.2773484 5.4568817 12.7554351 3.4890676 9.8199788 5.5815079 9.0810791 8.6973679 12.5454606 -1.5985880 13.0351620 5.8773320 9.2880272 10.0797590 4.4890612 NA 10.1216852 9.0345943 4.1295221 8.3673833 8.1175610 NA 5.4996323 9.9460806 10.1489529 9.4589139 11.8160200 10.2914833 11.5597353 1.7235149 10.8737822 15.0184637 8.1421556 9.4582233 10.6988020 10.9968565 5.1020408 3.9251639 9.3881523 11.9696739 -1.5985880 10.9860918 5.6962192 7.8994512 5.0163091 10.4436003 11.5701145 10.4163170 12.4097650 12.7163239 8.4253536 10.6289142 10.1459241 11.0499566 10.8658895 4.3084919 11.1962180 10.3349208 -0.5983695 10.6256007 8.9761926 3.5050906 6.6823696 10.6349191 10.1184185 10.1697834 9.9499393 2.5715312 7.7414488 13.0325487 12.1813184 9.6286132 9.0472575 -0.3983100 0.4361400 0.4361400 -0.0031859 -0.0031859 -0.0252770 0.4178100 0.0000000 0.0000000 0.0040580 0.0040580 0.0040580 0.0196430 0.0163530 0.0157270 0.0157270 0.0157270 0.0369350 0.0055529 -0.0020784 0.0147490 -0.4010900 0.0605080 0.0605080 0.0605080 0.0665150 0.0665150 0.0665150 0.0464170 -0.3522500 -0.3983100 -0.0110600 -0.0031859 0.0367940 -0.0337410 0.4178100 0.4178100 0.0000000 0.0000000 0.0000000 0.0132130 0.0196430 0.0040580 0.0322810 0.0322810 0.0322810 0.0322810 0.0163530 0.0163530 0.0175440 0.0157270 -0.0102940 0.0283410 -0.4127800 0.0143300 0.0143300 -0.0126820 0.0147490 -0.3832500 -0.3852600 -0.3757200 0.0605080 -0.4103600 0.0665150 0.0665150 0.0464170 0.0260920 -0.3506500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.860006 13.482541 5.994057 10.484746 5.330444 10.783142 3.102037 NA 8.516643 8.347043 NA 8.464063 5.156486 10.095086 9.510123 1.401576 10.007541 9.638809 10.024109 9.958105 9.569494 7.553884 12.007427 3.723526 8.696220 10.014928 5.401600 NA 10.803812 3.102037 13.274130 11.747697 8.738106 10.330117 8.565249 9.357975 3.445991 2.723537 2.489055 7.842469 8.489062 9.597586 9.557682 6.561470 7.290646 7.256467 9.851264 6.284242 9.230529 NA 11.604947 4.510126 4.971456 9.811202 6.092087 5.169785 10.440861 9.557050 7.008929 -1.598588 13.743882 2.208954 10.423967 NA 9.412826 5.932980 7.752539 9.684108 11.9490973 4.7766409 8.4267386 12.7554351 10.4666785 10.8775858 12.5454606 11.1802922 8.9837410 10.6560372 13.4934889 9.8466140 9.3881523 8.3888633 0.7235149 7.3024662 10.8806214 11.287105 5.909394 8.894454 8.410028 7.615918 10.066797 8.538590 7.838311 10.269264 7.881380 5.115845 5.658988 6.721497 10.948494 11.245520 7.875305 8.636417 12.305481 7.376013 11.614165 9.458914 10.861543 9.644178 11.132069 10.664575 10.840911 8.766828 NA 9.956835 7.483748 10.986092 7.299444 10.964795 10.443600 7.049058 13.684289 9.823664 10.707376 13.401071 10.486407 9.847648 2.102053 TCGA-A2-A0EO 54 0 NA 2442 breast stage ia t1 n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 NA 3 1 3 3 3 1 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 10.3457281 9.7006785 11.5962486 8.8990644 8.4171019 8.3536594 9.6029185 10.1587527 10.6032512 13.6256957 11.8343611 10.6711514 0.5207491 13.6135266 3.1057284 10.1178908 7.8199772 8.4807712 10.6178139 12.2693816 1.8426973 13.0461679 5.3281256 8.5610592 10.8373338 6.8426973 NA 9.7000566 8.9863358 2.7686925 8.2706387 8.4485475 2.4276598 4.7686978 9.6736880 10.3058131 9.0384389 11.5440040 9.4314121 11.1331772 1.1057451 11.3186336 15.4438648 7.5057862 9.3433403 10.8205498 11.3391519 4.1057284 -1.4791503 9.0482465 11.9915554 0.1056781 11.3530661 8.6679744 6.3086721 5.6082326 10.5504017 11.8757075 10.3453305 13.6902639 12.4400983 7.6654276 11.2452833 11.1796503 11.3949824 10.9157680 4.7302215 12.1443080 12.1286776 -1.4791503 10.4171019 8.9883751 2.6947019 5.4632824 10.9216489 10.1108886 10.1192873 10.1887680 4.5431370 8.4735105 14.0268290 12.9544853 9.6660647 9.6351625 -0.2892400 0.5234100 0.5203800 -0.3013800 -0.2977500 0.0054379 0.5701300 -0.6210800 -0.6210800 0.3653300 0.3653300 0.3653300 0.0026920 0.0040807 0.2118300 0.2118300 0.2118300 0.0000000 0.0000000 -0.1598300 0.0779210 -0.2958600 -0.6237400 0.0135490 0.0096449 -0.2033100 -0.2033100 -0.2033100 0.0555730 -0.2892400 -0.2892400 -0.2847800 -0.3013800 0.0184400 0.0054379 0.0047753 0.0047753 -0.6210800 -0.6210800 -0.6210800 0.0093098 0.0129910 0.3629400 -0.3072700 -0.3072700 -0.3072700 -0.2930300 0.0040807 0.0040807 0.2118300 0.2118300 0.2118300 0.2118300 0.0000000 0.0000000 0.0044974 -0.1598300 0.0779210 -0.3029400 -0.6482100 -0.6237400 0.8829400 -0.0034066 -0.2033100 -0.2033100 0.0555730 -0.0097625 -0.1521600 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 0.234 0.523 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 -0.103 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 0.234 0.523 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 -0.103 9.0156250 14.1295729 9.1280998 10.1736144 3.7169031 9.9365112 1.1057451 1.6906853 9.0226067 9.3168090 -1.4791503 9.1083969 2.7686925 9.7793354 8.9195132 1.3281471 9.3086719 9.5576299 11.0528818 10.0211134 9.6175834 6.7922320 10.9488679 4.1646254 9.9704339 9.9454607 5.7875552 NA 10.8090587 3.5651585 13.4928069 12.1230043 8.6944467 10.2474133 8.1317942 9.1519466 4.0126223 1.3281471 -1.4791503 4.7495879 8.6069056 9.8455125 9.4522458 5.5868578 5.1649150 5.7204426 9.9407297 7.0638017 9.6435974 -1.4791503 10.6903813 1.1057451 4.1931961 10.1921822 6.2627075 5.4749649 9.6558373 7.6161665 7.8176859 0.8426973 14.2851227 -0.4791503 10.4011182 NA 8.8130911 5.0443329 8.1555803 8.7663222 14.402838 4.520768 8.545909 13.613527 10.099614 10.528147 12.269382 12.235230 9.497548 10.816825 13.767733 11.454091 9.048247 8.704405 NA 7.318431 10.666702 10.897437 7.688187 8.905553 9.241014 7.629294 10.124150 6.735089 6.754389 11.834361 6.186106 3.378747 7.359974 5.568111 12.861176 10.184772 8.586415 8.594911 12.050688 6.052151 11.791360 9.038439 10.643274 9.976610 10.896080 9.019619 10.504832 9.234156 NA 9.695758 6.913087 11.353066 7.880519 10.182993 10.550402 6.996503 14.441471 9.847761 10.899335 12.807760 10.461817 9.170924 2.328118 TCGA-A2-A0EP 56 0 NA 3603 breast stage i t1 n0 (i+) m0 female 2004 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 0 10.0671095 9.2565116 11.1626184 8.5446639 8.2989808 9.8849576 9.7100181 10.1270572 11.0103829 7.8047002 11.7029907 10.1956901 1.5801455 11.2097217 3.4977018 11.5254440 4.6770233 8.9298738 9.4263495 11.3903773 0.7321389 12.2996466 7.0468621 9.8635958 8.6354450 5.4977018 NA 13.8955708 8.7445110 1.4102325 8.8614489 7.5420947 NA 4.7677872 9.7781984 9.9160493 9.3238751 10.3257437 9.4996883 10.7403143 4.8531823 8.6652663 14.8474046 8.3688775 9.9657807 10.2435232 10.0773493 5.1381591 2.9337992 8.4963741 11.3500006 NA 10.7202824 7.3080832 8.5650560 6.1981405 10.0341193 11.5762438 10.4350311 12.0381135 12.7827627 7.7787441 10.4621264 10.2832972 10.7411546 10.6933260 4.2928774 11.2786744 9.6528165 0.4102325 10.7338554 8.6546017 3.9730877 6.9648260 10.4343385 9.8259794 10.1899571 8.9629067 4.8696691 8.6354450 13.8476322 13.2254208 9.8686443 9.7025594 0.0397610 0.0397610 0.0397610 -0.0276710 -0.0298090 -0.0291750 0.0179170 -0.0287650 -0.0287650 -0.0310860 -0.0310860 -0.0310860 0.0197830 0.0197830 -0.0250720 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0172640 0.0268290 -0.0290580 -0.0790770 -0.0790770 -0.0790770 0.0193630 0.0193630 0.0193630 0.0182430 0.0397610 0.0397610 0.0066653 -0.0276710 -0.0295840 -0.0291750 0.0210430 0.0210430 -0.0287650 -0.0287650 -0.0287650 -0.0033243 -0.0033243 -0.0310860 0.0217440 0.0217440 0.0217440 0.0217440 0.0197830 0.0197830 -0.0250720 -0.0250720 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0251100 0.0172640 0.0216030 -0.0287650 -0.0753760 -0.0790770 -0.0790770 -0.1094600 0.0193630 0.0193630 0.0182430 0.0217440 -0.0320410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.885211098 13.621099267 4.082660016 10.824130027 6.740437857 10.621213421 7.800406841 1.995195046 8.940643947 8.942593675 -1.589876022 8.354114915 6.811117763 9.857320904 9.811650521 3.767792494 11.490389020 9.097613430 10.583914852 9.633032627 9.356025371 7.127913868 12.188725568 4.292877435 7.600062310 10.572629085 5.980093868 NA 11.389662903 2.317130379 13.086800880 12.136988069 8.768888956 9.959541094 8.798255016 9.311858868 6.075573276 4.243128274 -0.004768766 2.869674034 8.672332695 9.780380152 9.226421345 7.017567870 7.784712049 7.570109197 10.079565716 4.476329838 9.388948277 -0.589658895 11.345402752 4.110680615 4.268217284 9.151123119 5.601345901 8.801481389 10.567900476 10.656978327 8.889007414 4.387514192 13.834174293 2.410232546 10.772729506 NA 8.668803808 6.890017371 7.361522744 9.552344791 11.613578 6.335051 8.455997 11.209722 10.489056 10.262377 11.390377 10.489722 8.813250 10.195690 14.011312 11.289821 8.496374 8.257295 1.580145 6.953270 11.070679 11.2610106 5.9493972 9.2159816 8.5356514 7.6629033 10.1345341 9.8073775 9.4060049 11.7029907 6.1517046 -0.5896589 5.2682173 7.9505594 10.5820400 11.4766633 7.7478593 8.7355432 9.6396574 9.4614467 12.1182169 9.3238751 10.9237186 9.6117491 11.0224151 11.1611540 10.3160008 7.8448658 0.4102325 10.2196481 9.2232171 10.7202824 7.7961000 11.5401647 10.0341193 7.1784219 14.1933383 10.2740368 10.6690982 12.3158127 10.9612250 9.6288009 3.5395187 TCGA-A2-A0EQ 64 0 NA 2426 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 7 3 4 NA 1 3 2 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1.907385e-06 5.548757e-07 9.969070 9.118565 11.861489 8.787463 8.357005 9.129283 10.086473 10.484776 10.319590 13.457445 10.208746 10.919296 NA 12.606468 2.051407 8.256948 5.457391 8.798249 5.523888 12.623341 NA 13.416300 4.314436 9.510011 10.852299 5.549651 1.051372 10.689835 11.266447 1.899408 10.521448 6.229317 -0.270556 6.806287 9.536826 10.119640 9.415096 9.896889 10.476405 11.171378 14.094153 10.182227 14.740720 5.880639 10.747323 11.028965 11.510831 4.510829 5.329386 8.431644 10.395695 NA 10.930063 5.268629 7.718155 6.130350 10.271536 12.390358 10.124470 10.462910 12.496103 6.033251 11.259877 10.336441 10.630338 11.259390 3.484357 11.894064 11.966681 -0.270556 10.498482 10.381868 3.589943 5.948641 11.493098 9.870940 10.483106 10.507548 3.253036 7.943790 12.191718 11.515741 9.541648 9.748367 -0.1146200 -0.1146200 0.4491800 -0.1666700 -0.1654300 1.4150000 0.1368700 0.2010600 0.2010600 -0.3144800 -0.3144800 0.4312500 0.1646000 0.1487500 0.3580600 2.6235000 3.6271000 0.0200590 -0.0074793 0.1511300 -0.3625000 -0.3367600 -0.1953800 -0.0027739 0.4722000 0.1365700 0.1365700 0.1365700 0.2758400 -0.0376290 -0.1146200 -0.1776500 -0.1666700 -0.1673900 -0.1610300 -0.3248400 -0.3248400 0.2010600 0.2010600 0.2010600 -0.2279800 0.1024900 -0.3144800 -0.5009000 -0.5032900 0.1578500 0.1578500 0.2702800 0.2702800 -0.1955000 -0.0871850 -0.5195600 -0.5195600 0.0019960 -0.0074793 -0.0074793 0.0000000 -0.3303800 -0.3367600 -0.1996200 -0.1953800 -0.2038700 0.4708300 0.1365700 0.1365700 0.2758400 0.1532200 -0.0455750 0.149 0.149 -0.148 -0.148 0.000 0.000 0.000 -0.311 -0.337 -0.168 -0.168 -0.181 0.000 0.101 0.101 0.137 0.137 -0.115 0.335 0.276 0.276 0.144 0.000 0.000 0.000 -0.161 -0.161 -0.167 -0.167 0.137 -0.188 0.201 0.201 -0.175 -0.175 0.596 0.911 -0.503 -0.349 0.104 0.104 0.149 0.149 -0.148 -0.148 0.000 0.000 0.000 -0.311 -0.337 -0.168 -0.168 -0.181 0.000 0.101 0.101 0.137 0.137 -0.115 0.335 0.276 0.276 0.144 0.000 0.000 0.000 -0.161 -0.161 -0.167 -0.167 0.137 -0.188 0.201 0.201 -0.175 -0.175 0.596 0.911 -0.503 -0.349 0.104 0.104 10.291236 12.474830 1.314407 9.322862 7.333097 12.186467 5.172416 NA 9.115333 8.972645 -1.270556 7.048736 2.536824 10.747671 9.486027 6.268629 10.900648 9.843864 10.146269 11.037810 8.711951 7.087023 10.414220 1.729488 8.816934 10.263287 4.014873 NA 10.981841 3.484357 12.414877 12.347168 8.491022 10.438555 8.686573 10.319590 2.729466 3.858757 -0.270556 3.253036 9.650568 10.372425 10.154687 3.773870 9.096296 6.205205 10.173451 6.380523 9.608288 -1.270556 9.240235 3.773870 4.221320 10.103907 5.993726 8.316311 9.647589 9.067093 11.552838 0.729444 14.171054 0.729444 10.677108 NA 8.964289 4.729471 8.159924 7.147324 13.535312 6.523887 9.637113 12.606468 10.079305 11.204444 12.623341 7.800934 11.113637 10.809622 12.727356 9.785431 8.431644 9.475145 2.051407 8.062626 10.921147 11.497655 6.104511 8.698138 9.856176 8.622773 11.362930 8.554430 7.064861 10.208746 6.605988 -1.270556 9.608288 8.158166 11.994793 11.244925 7.536826 8.913106 9.225326 9.568675 11.126311 9.415096 10.049143 9.910002 11.786278 9.893121 10.719930 7.977398 11.363601 9.181558 10.255481 10.930063 6.147323 11.510831 10.271536 7.565522 14.472438 10.606372 10.119640 12.567789 11.626182 9.503434 5.729471 TCGA-A2-A0ER 63 0 NA 2263 breast stage ib t1c n1mi m0 female 2005 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 2 4 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 10.755627 10.286006 11.960853 10.555815 8.097682 8.388487 10.413885 10.515099 8.846030 14.312018 12.034521 10.958233 -0.730488 12.779445 3.439477 7.852629 4.695810 8.593726 11.056428 13.391686 1.269572 14.296631 3.554945 9.428156 11.273415 5.687399 -0.730488 10.929542 10.237853 0.269512 8.011013 7.146063 3.076901 3.176434 10.220466 10.639143 11.526786 11.775109 10.265666 12.104511 13.354603 11.472282 15.308990 8.268898 9.011013 12.140874 11.858495 4.076901 6.708338 9.590346 11.543633 NA 10.985293 3.223747 5.469219 5.661864 10.808947 11.704825 10.193245 11.772999 12.938265 7.875026 11.230272 10.899449 11.447744 11.498665 6.825400 12.347446 11.421831 1.269572 10.233526 9.091320 2.597245 5.609394 9.768894 10.269194 10.335635 10.026936 2.793105 8.956921 11.941971 11.425313 10.192873 8.612732 -0.00761010 -0.00761010 0.00041593 0.00000000 0.00000000 0.01391100 0.00527490 -0.00899060 -0.02899200 3.65690000 3.65690000 0.01838300 0.00513590 0.00213290 0.70232000 3.65690000 3.65690000 -0.02054900 -0.00277070 -0.13199000 0.00527490 -0.01078400 -0.05819300 -0.05819300 -0.05819300 -0.04888300 -0.04888300 -0.04888300 0.04329900 -0.00761010 -0.00761010 0.00000000 0.00000000 0.00291330 0.01391100 0.00485790 0.00485790 -0.00899060 -0.00899060 -0.02899200 0.00000000 0.00000000 -0.76192000 -0.75719000 -0.74142000 -0.03272300 -0.03272300 0.00213290 -0.00138710 0.70232000 0.62715000 -0.75046000 -0.77192000 -0.00277070 -0.00277070 0.63426000 -0.13199000 0.00527490 -0.00539920 -0.10802000 -0.05819300 -0.05819300 0.00346870 -0.04888300 -0.04888300 0.00097064 0.00152550 -0.07787800 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 8.0076384 11.8615357 7.4444716 8.6456714 4.3207013 10.4306778 -0.7304880 -0.1454457 8.2091253 5.7773408 NA 6.2739914 2.1764504 10.4670697 8.9304331 2.9699885 8.7543688 9.5909104 15.0487907 10.0603017 9.1995070 8.1521890 9.9773365 2.6618636 9.9743142 9.3787236 3.9134065 NA 10.4817383 3.3139424 12.0827258 12.1083559 6.9525409 10.9375444 7.4692185 9.4313077 2.1764504 0.2695120 0.2695120 2.4394636 9.3456933 9.0865296 10.3446907 4.5549510 7.4021483 5.7613996 11.0623362 6.0377292 10.0945046 NA 10.9237344 2.0769011 7.4116533 9.7746131 7.6283508 3.5174773 9.5761773 8.0410354 11.0845289 -0.1454457 13.7832735 -1.7302487 11.1673914 0.2695120 8.1475967 4.2695494 8.1166034 9.2688414 16.9129968 5.7371513 8.5641666 12.7794446 10.2436020 10.7007823 13.3916863 12.3785603 8.5082492 11.2034209 12.5861810 9.4313077 9.5903464 8.0177388 0.8544745 7.4065367 12.8264710 10.783027 6.909791 8.778331 9.654869 9.277274 10.101937 5.526933 7.409097 12.034521 5.582430 NA 5.949026 8.594435 11.147597 10.043097 9.574912 10.070850 12.801902 5.102436 11.136176 11.526786 9.949905 10.300213 13.808705 8.406537 10.592882 9.017739 NA 8.760056 5.063960 10.985293 4.573326 10.272361 10.808947 7.367578 13.949108 10.243243 9.546252 12.911598 9.749326 9.628746 -1.730249 TCGA-A2-A0ES 52 0 NA 2190 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 2 NA 2 4 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 3.467973e-08 10.6812862 9.9845546 11.5991888 9.8911277 8.3379844 9.0832083 10.4910638 9.9524576 10.1512429 13.7045576 11.0898628 10.5668695 3.5714584 13.0041932 3.7809085 9.8399975 7.6799804 9.1135200 10.5816340 12.1514786 6.1260436 12.1350094 6.3788098 9.2423596 10.7294341 4.9637747 NA 11.2189567 9.1582954 5.8475811 7.7313272 8.3010764 -0.4285659 4.0633045 10.2301134 10.2278804 9.8723800 11.7021870 10.2640711 11.7162731 11.4830348 11.6816126 14.6932926 7.8516466 9.9632308 11.7555561 11.5170823 5.6799811 3.0308834 9.6734312 12.8720941 -0.4285659 11.6219845 5.9551593 5.1260436 4.2153136 10.7300653 11.9128354 10.2916998 13.4030597 13.0478854 7.9829668 10.9680604 10.8569214 11.3040470 11.3234180 4.8382408 12.0962421 11.0231819 NA 10.3070115 9.3421196 4.0950214 6.5139707 10.3400535 10.5121362 10.1474675 9.9366845 6.0871552 9.1573570 13.4496023 13.4082456 9.9218423 9.5088293 0.00014504 0.00014504 -0.07940000 0.00208690 0.00208690 0.00134130 0.00361400 0.00042234 0.00042234 0.72245000 0.37348000 0.00153190 0.00167070 0.00167070 -0.01221200 -0.00470150 0.86157000 0.03144300 0.03144300 -0.00068662 -0.00250300 0.00611540 -0.02479200 -0.02479200 -0.02479200 -0.01800400 -0.00027083 -0.00027083 -0.00082520 0.00014504 0.00014504 -0.00027083 0.00208690 0.00167070 0.00134130 0.00347520 0.00000000 0.00042234 0.00042234 0.00042234 -0.02862200 -0.02862200 -0.08797100 0.00139320 0.00139320 0.00139320 0.00139320 0.00167070 0.00167070 -0.03072900 -0.00470150 -0.08173200 -0.08173200 0.03144300 -0.06302600 -0.10169000 -0.00068662 -0.00250300 0.00262570 -0.09405700 -0.02479200 -0.02479200 -0.07973600 -0.01800400 -0.00027083 -0.00082520 -0.00791690 -0.00165650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.1778608 12.3040470 7.8050751 10.0979548 3.0943881 10.3325912 0.8933622 3.2718888 8.2044508 8.7135625 -1.4285659 8.8146296 2.4783506 9.7218376 9.1365577 1.5714341 10.5647478 9.7960602 12.6328268 9.5615595 9.5427620 8.0910921 11.1434451 2.0309010 10.1231639 10.4973808 8.3061652 NA 9.5154355 5.1106138 13.2026326 12.2135073 8.1971646 10.7802996 9.1289192 8.8866050 5.8752370 2.2719037 1.3787890 1.3787890 8.4947832 9.1115835 10.1592331 6.4356419 7.7852648 5.3916337 10.0092076 6.0633088 9.7519863 0.8933622 11.5900035 2.1564290 4.8752345 9.6440639 5.5008913 3.4783506 9.0552713 8.2243003 6.9850837 0.5714341 13.9474792 NA 10.4122335 NA 8.0592958 6.2080802 8.0370219 7.9068461 11.907894 4.429435 8.334668 13.004193 10.417729 10.001385 12.151479 12.809114 10.584810 10.939689 14.116541 11.924740 9.673431 8.637545 -1.428566 7.952999 11.703795 11.282907 7.051236 9.629447 8.916861 7.728803 10.373649 7.034980 7.306166 11.089863 6.110614 7.254450 7.690397 5.902373 12.544615 10.365465 8.745133 8.143208 13.022087 6.319649 11.156489 9.872380 10.325926 9.165780 11.589134 9.658255 10.461720 9.384435 -1.428566 9.422947 6.333007 11.621984 6.711008 10.978843 10.730065 7.129876 14.383508 10.020088 10.491436 13.116480 10.049720 9.859168 1.378789 TCGA-A2-A0ET 58 0 NA 1066 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 5 1 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 10.8112608 10.7043121 11.6085772 9.4307469 8.7339830 8.7293869 9.8090845 10.3776923 9.1092435 13.9672977 7.5543893 11.6056962 1.9229590 13.0087093 4.2030602 7.4621112 4.7594541 8.8713197 8.6787938 13.2180653 0.4375474 15.1252074 -0.2993827 10.2300589 9.7417627 8.8587488 -1.8841677 9.2754688 11.8429861 1.7005729 6.8503069 5.6624932 NA 2.7594541 10.0719737 11.0062417 11.1435034 9.8663044 10.0396676 11.2088500 -0.2993827 10.6019297 13.9561787 9.4673041 9.2805045 13.1467817 11.5986574 4.9735791 4.7738065 9.0849840 11.4236520 NA 10.8667230 3.8969596 6.0404103 3.0224921 11.1565721 12.4163790 10.7458645 11.0652418 13.0282997 8.1776438 10.8598006 11.2400872 10.6704261 11.1398714 5.8903835 11.0045309 10.0907289 NA 10.5693825 9.2973710 3.2859200 4.9357756 11.2037231 10.1313609 11.3248985 10.1517711 -0.2993827 7.1977465 11.6681465 10.3620411 10.3954981 9.0871411 2.0403e-01 7.8819e-01 7.7783e-01 -4.9605e-03 -1.1008e-03 4.4213e-01 3.7058e-01 3.5862e-01 -5.6112e-01 1.7221e-03 1.7221e-03 0.0000e+00 1.5645e-02 1.5645e-02 -5.5673e-01 -5.5673e-01 -5.5673e-01 3.5078e-01 3.5078e-01 1.8433e-01 -2.0107e-01 -3.4946e-01 4.6578e-01 4.6578e-01 4.6578e-01 2.5972e-01 2.5972e-01 2.5972e-01 5.8793e-01 -4.6839e-01 -4.2139e-01 -1.9069e-01 -4.9605e-03 4.4213e-01 9.6464e-03 3.8079e-01 3.8079e-01 3.5862e-01 -5.6112e-01 -5.6112e-01 -1.7076e-01 -2.2851e-01 1.7221e-03 -2.3919e-01 -2.3771e-01 -1.3054e-01 -1.4536e-01 1.5645e-02 1.5645e-02 -5.5673e-01 -5.5673e-01 -5.5673e-01 -5.5673e-01 3.5078e-01 3.5078e-01 3.2504e-01 2.0907e-01 -2.0107e-01 -3.4384e-01 4.8689e-01 4.6578e-01 4.6578e-01 1.7263e-05 2.5972e-01 2.5972e-01 5.8998e-01 -2.1453e-02 -5.9999e-01 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 0.000 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 0.000 7.8177703 10.3038772 1.8160262 8.6134491 2.6824160 11.0134429 0.7005285 NA 8.3299165 5.9100131 NA 5.1599924 -1.8841677 9.8371239 9.7526752 1.1155660 8.9974762 10.4182363 10.7549382 9.8281244 10.0695975 8.6977394 9.8138681 2.8160467 10.0138209 9.3383923 1.7005729 -1.8841677 11.1565721 2.7594541 12.1346669 11.2787754 7.9293786 10.2027287 9.6243826 9.3599612 5.5502266 -0.2993827 -1.8841677 8.7117871 8.7585517 8.7247761 9.2480972 2.4375207 1.9352711 5.4193771 10.7399360 5.7005590 10.3794534 NA 10.6317899 2.5750218 3.9982406 9.6267768 4.8778129 1.5750218 9.2448804 7.5397637 6.2345377 -1.8841677 13.8450589 -0.2993827 11.3511630 NA 7.1789924 5.0463339 8.1503962 9.5239271 13.2698222 4.4375274 9.0639648 13.0087093 10.6279873 10.9437339 13.2180653 10.1890695 8.6797563 11.0826435 13.5232304 11.1201690 9.0849840 8.3152696 0.7005285 8.3311306 11.5521789 10.266931 7.675930 8.397527 9.623392 9.322612 10.202012 7.124026 6.945320 7.554389 6.900233 -0.884434 9.401000 8.220170 7.982876 9.861272 8.150396 8.177644 13.277674 4.985960 12.192631 11.143503 11.083724 9.350415 11.035578 8.274207 10.286774 8.992882 NA 8.903272 4.069797 10.866723 6.239719 10.602267 11.156572 7.317868 13.626269 10.304495 9.569897 12.527704 9.750409 10.047443 2.115599 TCGA-A2-A0EU 79 0 NA 1043 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 3 2 2 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 10.5560180 10.2411168 11.4817970 8.5418606 8.6866168 8.4725475 10.2803635 10.1617717 8.8582412 14.4904894 11.1590168 10.7297878 0.9903740 12.5130243 3.7128159 9.5639919 3.7128159 8.9363738 6.3826621 13.4086190 3.1278479 13.8145079 3.1919732 10.0474862 11.0043651 3.4757723 -1.3316993 8.2249225 8.9733383 -0.3315178 7.6370835 8.2646063 4.5013054 3.6226141 9.7196255 10.7713765 10.6356429 11.9549743 10.0276170 11.0369231 2.1278644 11.9903447 14.5943419 7.2597141 9.7196255 11.4941704 10.9281598 3.6684142 0.2533842 9.1870697 11.2902396 -1.3316993 10.8739044 4.1919811 5.7664494 5.2075766 10.0894294 12.0362408 10.1237438 11.2347085 12.5525871 7.9139695 10.7595214 10.0780091 12.2578337 10.6620627 4.6226141 11.4274725 12.4103049 1.9903377 10.3403998 9.5798086 2.9163429 4.2533767 11.1178232 10.0730260 10.3976125 10.8060482 1.8383467 8.1257973 11.8461475 11.5846693 9.3014118 8.6485560 0.0119580 -0.0112640 -0.0112640 0.0000000 -0.0005339 0.0282000 0.4012700 -0.0051227 -0.0051227 1.2450000 1.4974000 1.4974000 0.0632230 0.0508080 0.3746700 0.3746700 0.3746700 0.7373900 0.7373900 -0.3166900 -0.3949700 -0.0175290 0.3149800 0.3149800 0.3149800 0.6604800 0.6604800 0.6417600 1.0814000 -0.0403300 0.0054139 -0.2975600 0.0000000 0.0282000 0.0282000 0.4012700 0.4012700 -0.0051227 -0.0051227 -0.0051227 0.0780560 0.0764220 -1.1917000 -0.4062600 -0.4062600 -0.4062600 -0.4315200 0.0508080 0.0606510 0.2462200 0.3746700 0.3746700 0.3746700 0.7373900 0.7373900 0.7373900 -0.3166900 -0.4122100 -0.0175290 -0.4288700 0.3149800 0.3149800 -0.3116700 0.5927200 0.6417600 1.0814000 -0.4184900 -0.4449100 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.660 0.660 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 0.000 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.660 0.660 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 0.000 7.5722985 12.7470678 8.8790879 9.0767464 4.4708687 10.2201248 1.2533842 0.2533842 8.1900172 8.1662685 -1.3316993 6.9948456 4.0259678 10.6638304 9.6648901 1.4757594 7.9835660 9.8729877 6.3408417 10.1637719 9.1314403 7.9491876 10.5541130 -0.3315178 10.0612706 9.4693164 3.9903468 0.6683915 10.2339947 4.0607305 12.6666544 11.5954538 8.1602698 10.3571041 8.5107669 9.6449807 1.2533842 0.6683915 NA 6.1441504 9.6456964 9.8821284 11.0281662 4.5753063 6.5558806 6.8532921 10.9390039 6.7925378 9.9020363 NA 9.5395518 3.1278479 4.2230054 10.0235969 5.9449123 3.7976978 9.5939711 7.5387810 5.2230054 6.5872795 13.7969749 0.2533842 10.4203790 -1.3316993 8.4182861 4.2533767 8.9595873 8.7169035 13.999266 6.290469 9.057510 12.513024 9.538781 10.631313 13.408619 13.140854 8.896033 10.967338 12.806128 11.298911 9.187070 7.835835 1.838347 7.906821 12.450493 10.500120 7.347897 9.546468 9.847704 9.191979 10.012285 5.297775 8.184117 11.159017 6.766448 2.575312 4.253377 7.291347 9.998773 9.188053 8.865633 9.074622 12.641666 4.838342 13.216453 10.635643 10.261808 9.544934 12.026518 9.310468 9.821335 9.488596 NA 8.371888 4.312273 10.873904 6.925805 10.245373 10.089429 6.897236 13.292641 10.502888 10.787682 12.525523 10.364949 8.864404 1.475759 TCGA-A2-A0EV 80 0 NA 968 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 1 NA 2 2 1 2 3 2 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.421869e-06 3.121176e-07 9.8261024 10.1432266 11.9699545 9.6202519 8.9888840 9.2605275 10.0560434 9.7505454 9.8349976 13.1709353 10.4851584 10.7366690 NA 13.6711996 3.5764980 8.4932586 4.9808890 8.3439065 8.8333341 12.7645806 -1.5108681 13.3397621 2.5764980 9.6086278 10.7464259 4.5551290 0.0739573 12.1908860 10.5611707 2.5764980 7.1328945 8.0027655 NA 4.1894767 9.5162530 10.6736035 9.8580901 11.3132013 10.0340026 11.5885503 0.4890291 11.2313475 15.0970618 7.4316405 9.7905342 9.5678561 11.6301873 4.9484700 -1.5108681 9.1702766 12.8439073 NA 10.9405068 6.1037473 6.4663188 5.3345289 10.2526654 11.9607133 10.5645173 12.6005813 12.6943732 8.3407870 10.6686362 10.6347633 11.3798723 11.2094961 5.1328935 12.9868899 10.9670493 -0.5108681 10.4688205 8.8030549 2.8799802 5.6589626 10.3294227 8.6972724 10.6330590 10.0445859 2.2963987 8.6438562 13.1758121 11.2086408 10.3163808 9.5578163 -0.02598700 0.62825000 0.65259000 -0.01161100 0.69783000 0.00499690 0.30294000 0.30044000 -0.04284200 0.42032000 0.42032000 0.00124810 0.32157000 -0.36136000 -0.01013700 -0.04425300 -0.04425300 -0.36850000 0.32414000 -0.35816000 0.00042322 0.30809000 0.85799000 0.85799000 0.89146000 -0.00857660 -0.00857660 -0.00857660 0.32141000 -0.02598700 -0.02598700 -0.01876100 -0.02141300 -0.01574100 0.00499690 0.28961000 0.28961000 0.30697000 0.00000000 -0.01730200 0.32125000 0.31466000 -0.72323000 -0.00429290 -0.00429290 -0.00429290 -0.04708600 -0.36136000 -0.01587300 -0.01013700 -0.04425300 -0.00678130 -0.00678130 -0.36850000 0.32414000 0.32834000 -0.34366000 -0.02027500 -0.00735360 -0.36737000 -0.40451000 0.89146000 -0.35345000 -0.00857660 -0.00857660 -0.05212600 -0.00415460 -0.09775900 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.295 0.295 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 0.000 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.295 0.295 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 0.000 9.2024246 13.9090641 7.2405824 9.1101742 3.5334263 11.1337956 -0.5108681 -1.5108681 8.8586353 8.0474588 NA 7.7530349 3.6984963 10.2393263 9.1658768 3.6984963 8.6438562 8.8941796 8.8920500 10.8134999 9.5472057 7.7674873 10.3309955 2.1894767 7.1614635 10.1152034 2.9484700 NA 11.1985527 2.9484700 12.0597239 11.9610942 7.8132188 10.0417072 9.5605004 9.3974308 4.3219281 1.4890291 -1.5108681 3.2963987 8.5402470 9.6570833 10.2245941 5.1037494 7.2599334 3.6589655 9.8973678 5.7651634 10.2879148 NA 11.2109917 2.8109572 3.9808936 9.7192026 6.8030552 6.0436267 9.7422946 8.9226236 7.9828938 1.4890291 13.5550432 -0.5108681 10.5578163 -0.5108681 7.7322122 4.0436245 8.5645173 8.1129195 13.3355054 5.0588922 8.6451212 13.6711996 9.9257497 10.7178567 12.7645806 12.9644549 9.2662935 10.3092170 13.1771791 8.4079012 9.1702766 9.0945177 0.0739573 8.1790362 11.7186080 11.053426 7.070239 9.398931 8.819955 9.816029 10.047263 7.404918 5.296391 10.485158 6.618321 4.489035 4.948470 7.664363 10.406783 10.556472 8.379303 8.752307 12.428801 6.283453 11.247632 9.858090 10.273264 9.817152 10.564851 9.689937 10.675462 9.479142 2.395940 9.729561 6.500265 10.940507 7.216958 9.869499 10.252665 8.010776 13.347893 9.975873 10.145016 13.582332 10.338052 9.326666 2.658965 TCGA-A2-A0EW 53 1 1884 905 breast stage iiic t1b n3a m0 female 2008 NA yes infiltrating lobular carcinoma 26 white not hispanic or latino 8 2 2 NA 2 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 11.0118036 10.1918952 11.8886333 9.9137522 8.2221597 9.2734348 11.2668131 9.5492129 9.5702052 11.1300767 11.5246184 10.5230563 5.2170174 12.7906275 3.9622066 9.9121618 6.1609827 9.0174849 10.5454563 12.5266984 2.5027634 13.0263328 7.5981679 9.7085702 10.5461400 5.8603222 NA 9.7116148 9.2543148 5.2442363 8.3991031 7.4006165 1.3101074 5.2709550 10.2659832 10.4518680 10.4555122 11.7428168 10.3161513 12.2106692 10.5509171 10.7164827 14.4090273 8.7438246 9.5928832 11.8712773 11.5111995 5.3607505 4.9946250 9.6152105 12.6793336 NA 11.6786323 5.8336871 6.2643225 4.6925946 10.7396820 11.7833967 10.0664438 12.6875687 13.0150793 7.7435621 11.0903140 10.8132502 11.4739552 11.5265252 4.8950893 11.5239243 9.7393830 0.5027379 10.4156602 9.1082503 4.0616466 6.8864758 10.3165521 9.9870903 10.0520743 9.8088326 3.7881741 10.3129408 13.2855132 13.3056911 10.0060997 9.7453496 -0.0021570 -0.0021570 0.0044411 0.0084743 0.0054092 -0.0080244 -0.0003442 0.0011093 -0.0041940 2.1514000 0.0202030 -0.0023204 0.0051359 0.0051359 0.0087528 0.8846600 1.5910000 0.0011093 0.0011093 -0.0829340 0.0031508 0.0176840 0.0058309 0.0058309 0.0058309 0.0018030 0.0018030 0.0018030 0.0178240 0.0143300 -0.0021570 0.0000000 0.0084743 -0.0080244 -0.0080244 -0.0003442 -0.0003442 0.0011093 -0.0041940 -0.0015243 -0.0011087 -0.0011087 -0.4512600 0.0079175 0.0079175 0.0079175 0.0157270 0.0051359 0.0139110 0.0097276 0.0033299 -0.4387500 -0.4387500 0.0011093 0.0011093 0.0011093 -0.0829340 0.0031508 0.0245480 -0.4366900 0.0058309 0.0058309 0.0066653 0.0018030 0.0018030 0.0178240 0.0077783 -0.4391800 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 0.000 9.51609357 13.47498784 8.22557861 10.67956736 3.09911002 10.96910227 3.45696381 1.50278885 8.57423323 9.24508037 -1.49736388 8.96253023 4.63205296 10.01205098 9.53481664 1.67269688 10.22813710 9.82582569 10.81933528 10.39531370 9.84113957 7.78122003 12.23015956 3.50277612 9.99712654 9.81395158 5.52513865 -0.49716024 10.28740569 4.50276976 12.74348768 12.16254384 9.47359577 10.36385780 8.80426722 9.04676933 5.64232323 -0.49716024 1.50278885 4.33566190 8.69135968 9.24170745 10.23281638 7.96425017 8.62766775 6.37313486 10.11056357 6.22387043 9.51748889 0.50273794 12.15583985 5.56885905 5.43350699 9.42704146 5.93848341 5.13212850 9.70489461 9.35373900 6.78354178 -1.49736388 13.99712647 0.08773438 10.38579598 -1.49736388 7.06882449 6.43350866 7.85149920 8.97951694 14.3102113 4.9121612 8.5594084 12.7906275 10.4999504 10.3769838 12.5266984 12.3791919 9.9505773 10.9787576 13.8138806 11.6884207 9.6152105 8.4216340 -0.4971602 7.7122243 11.4942927 11.345710 6.657589 9.149329 8.747135 7.897234 10.728343 7.412664 7.471438 11.524618 6.316551 2.750692 5.558053 6.297577 11.588907 10.394555 8.682680 8.525139 12.355593 6.257657 11.991200 10.455512 10.210993 9.649976 11.852052 10.199304 10.632054 8.643601 1.087734 9.315413 6.912161 11.678632 6.916399 10.664382 10.739682 7.287406 14.226192 10.218304 10.160089 12.776129 10.583588 10.050629 4.026331 TCGA-A2-A0EX 46 0 NA 752 breast stage iib t3 n0 (i+) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 2 NA 2 4 3 3 3 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.040392e-07 9.5045356 9.6679721 11.8623632 9.0031943 8.3339581 8.3241373 10.0909467 9.4558958 10.4477781 9.2719618 10.9877245 10.2493065 4.0563668 13.7664462 2.8084468 9.8865881 4.8528328 8.2801124 9.1303654 12.7459031 -1.1916561 13.7154688 4.4808597 9.0251833 10.7706104 4.0178863 NA 9.9189206 9.7487509 2.2678653 7.8112527 7.1393539 -1.1916561 4.4522923 9.2061120 10.2446283 9.0408582 10.4590404 9.7949906 11.1337428 -1.1916561 11.1150687 15.0464688 6.6044776 10.2760428 11.0575508 10.9588193 5.3933990 3.1303708 8.7799810 11.4850556 -0.1914914 11.1861901 7.9783621 5.9783627 4.1303626 10.3187071 11.9491074 10.3102746 12.5082267 12.4169232 7.7362152 11.0411581 10.7138958 10.9527769 10.8311520 4.3934025 12.3258607 11.6091351 -0.1914914 10.1643390 9.5583069 2.8316949 4.5897994 10.6198121 10.1659893 10.1013341 10.8259417 4.8958988 8.8027907 12.8060579 11.7273006 9.9396512 9.4887970 -0.0042516 0.0111210 0.0012481 0.0016642 -0.0144280 0.0038854 0.7702900 -0.0261670 -0.0412160 3.6569000 0.5530100 2.9123000 -0.0232170 -0.0232170 -0.0357430 -0.0049844 -0.0182530 -0.0313590 -0.0313590 0.0155870 -0.0111140 -0.0048291 0.0331270 0.0331270 0.0331270 0.0339720 0.5013400 0.5013400 0.0231450 0.0592270 0.0111210 0.0172640 0.0203900 0.0038854 -0.0071958 -0.4855400 -0.0107710 -0.0261670 -0.0412160 -0.0342230 0.0921700 0.0888370 -0.4971500 0.0144700 0.0144700 0.0144700 0.0144700 -0.0194520 -0.0194520 -0.0357430 -0.0181690 -0.0376260 -0.0376260 -0.0313590 -0.0313590 -0.0313590 0.0155870 0.0065262 -0.0048291 -0.4782800 -0.4603500 0.0331270 -0.0515860 0.0339720 0.5013400 0.0231450 -0.0358570 0.0394780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 0.000 8.9945517 12.9571522 8.9247813 9.6601863 3.9783604 10.2611933 2.7153223 2.6157929 8.8998729 9.0093360 0.8084262 7.9957892 2.7153223 10.0955725 8.8785583 0.3934162 9.0717066 8.9195731 10.8835822 10.7957014 9.3506471 7.5431471 10.8698086 2.6157929 8.2596486 9.8691333 6.9883461 NA 10.5376332 3.3320061 13.8263332 12.3267217 8.5599816 10.1942997 7.6971803 9.8985497 3.2678653 1.1303379 NA 0.8084262 9.4486823 9.7878626 10.6218177 5.8959012 6.9472208 5.7857179 9.8725064 6.1482874 9.5683255 NA 11.1626868 2.8959036 3.9377210 10.0977013 7.1045275 4.7153278 9.5658273 8.0752240 7.6028532 -1.1916561 14.4259335 -1.1916561 10.2997894 NA 8.7198293 5.7509521 8.1681867 9.0504206 13.082306 4.666416 9.065825 13.766446 10.195378 10.038458 12.745903 11.951980 8.987102 10.498435 12.734641 11.935142 8.779981 8.541453 NA 7.455896 10.713448 11.1516231 5.7153278 9.0456472 9.3505019 7.5633252 10.1158089 6.8637192 6.9273786 10.9877245 7.5566302 4.2347006 6.0081104 5.3387275 11.1187661 10.3471113 9.2821430 9.0007302 11.9208769 6.2430654 9.4730534 9.0408582 10.7864327 9.8939099 11.2063793 8.8321916 10.3773435 9.3475961 NA 9.4212597 6.8027903 11.1861901 7.7391744 10.2877124 10.3187071 7.0276064 15.2106667 10.2441076 10.6282173 12.6547113 10.2780792 9.2061120 -0.1914914 TCGA-A2-A0EY 62 0 NA 1925 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 4 NA 1 6 1 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.334966e-06 2.150143e-06 9.8198099 8.8893646 11.7635300 9.4198793 8.3341495 9.5495146 9.8343386 9.8504391 10.7418074 14.2990698 10.0930298 10.6804068 4.9245560 16.6075538 4.8349185 8.2620417 6.4802522 8.6475466 11.0102264 12.9080284 NA 12.8888774 3.3568762 9.5725757 11.6118980 4.1041018 NA 9.9825731 11.5990228 1.5495213 7.8532952 6.5438686 -0.4504787 4.7393405 10.9040394 11.6108857 9.2943483 10.3950046 10.0973731 11.6893856 11.2007905 10.5853446 14.7242257 9.3987554 9.2103930 11.1031439 10.3512229 5.1193686 5.3044015 8.8406851 11.1628436 NA 10.2126278 5.6475476 6.6102099 5.0413657 11.1879504 11.3439304 9.5466941 11.9728931 12.6486979 7.2603212 10.7638336 9.9813621 10.6749280 10.7322192 4.2774343 11.7989243 9.0068955 -1.4504787 11.0229666 9.6402885 4.2538305 5.4683780 10.9991791 10.6716954 10.0478651 10.3500101 4.0730747 10.4067180 13.1226883 10.6807285 9.3957884 8.8882510 -3.7970e-01 6.4323e-01 6.5914e-01 -1.6478e-02 6.7672e-01 -3.9457e-01 -3.9102e-01 6.8062e-01 3.6553e-01 -8.4879e-03 -8.4879e-03 7.3448e-01 -1.9775e-02 0.0000e+00 3.5767e-01 3.4610e-01 3.4610e-01 3.1252e-01 -2.3752e-02 7.0732e-01 -3.7182e-01 -3.6775e-01 3.6569e+00 3.6569e+00 -2.3961e-02 2.7563e-01 1.6579e-01 1.6579e-01 3.8000e-01 -3.7857e-01 -3.7970e-01 -1.7578e-02 -7.5214e-03 -6.4422e-02 -8.0545e-01 -4.0067e-01 -8.0039e-01 6.8062e-01 3.6553e-01 3.6963e-01 3.9079e-01 -8.5372e-02 -8.4879e-03 -2.7157e-01 4.7455e-01 -3.7215e-01 6.5657e-01 0.0000e+00 1.5326e-02 -3.8597e-01 3.4610e-01 3.4610e-01 3.4610e-01 3.1252e-01 3.1156e-01 -3.9022e-01 6.9229e-01 -3.8082e-01 -7.8628e-01 -4.1842e-01 -3.7734e-01 -5.3794e-02 5.0484e-02 7.7380e-01 1.6579e-01 3.8000e-01 2.3065e-01 6.9177e-05 0.000 0.000 0.000 0.346 0.313 0.000 0.707 0.000 -0.368 -0.353 -0.353 -0.353 0.000 -0.388 0.000 0.276 0.276 -0.380 0.264 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.317 0.000 0.000 -0.401 -0.401 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.346 0.313 0.000 0.707 0.000 -0.368 -0.353 -0.353 -0.353 0.000 -0.388 0.000 0.276 0.276 -0.380 0.264 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.317 0.000 0.000 -0.401 -0.401 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 0.000 8.7516385 12.9622167 3.3568762 9.3218291 4.2774343 11.0725864 2.8714494 NA 8.6329937 6.4074955 -1.4504787 7.7319089 1.5495213 10.7531684 9.5296541 3.5939035 8.8804315 9.8504391 10.4144745 10.6455708 9.8953799 7.9418317 10.5203394 2.2499610 8.1401017 9.8731323 8.3439305 -1.4504787 11.0644751 2.4564119 12.7363252 12.2341536 7.1307147 10.4431953 6.9673669 9.5544373 8.2499544 4.4321577 1.1344838 8.3060708 9.1688175 9.8492950 10.4004826 3.8349134 9.7262737 7.2977078 10.1122340 6.7686832 9.1960731 NA 10.0448699 2.8714494 4.5037113 10.0409167 7.0809348 6.1568456 8.8871365 8.6979910 7.1568446 2.7974488 13.2254165 0.5495213 11.1443057 -1.4504787 6.4443325 4.5718831 8.2289947 10.3835905 11.818327 5.871442 8.636977 16.607554 10.332513 10.841549 12.908028 11.258167 9.312660 10.772611 12.972762 9.120319 8.840685 7.100262 3.073083 7.731909 11.182055 11.997631 5.915836 8.496421 8.713164 8.701799 11.306719 7.546694 8.905966 10.093030 5.719441 -1.450479 5.816300 6.983642 10.007408 11.365098 8.182328 8.478773 10.013550 6.768683 12.188008 9.294348 9.806313 10.148498 11.554262 9.948793 11.192469 9.216626 5.593909 9.998261 7.029295 10.212628 6.825639 11.708440 11.187950 7.130715 13.284542 9.482467 10.364097 12.763758 10.884067 10.122215 2.134484 TCGA-A2-A0ST 62 0 NA 3017 breast stage iia t1c n1a m0 female 2003 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 4 4 2 4 2 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.040392e-07 10.5611490 9.6125073 11.5253770 9.5053495 8.6651437 9.4744519 9.1191754 10.6148704 10.6129014 12.9773858 11.0073003 10.7731172 -0.2251602 12.0949747 2.5822429 10.0363867 5.0786611 9.5163463 9.5255864 9.1618197 1.7748819 11.5664493 7.4959789 9.4538139 10.4688018 5.5950590 0.7748398 11.5067838 10.8413050 1.9448210 9.1832091 7.5364306 2.0968016 6.9597551 9.8503585 10.0322671 9.4631297 10.6613380 10.1401082 11.3699037 3.7748819 8.7888997 14.8190813 7.7387293 9.4813322 11.4090097 10.6911320 4.9843341 0.3598585 9.3052857 10.8399588 NA 11.4328676 6.3895892 8.5297667 6.0036989 9.6359662 11.9166672 10.2757212 11.3720008 13.0377817 6.2506130 10.7979406 10.5494234 11.1794887 11.1658544 4.5822368 11.8194442 8.8288051 -1.2249916 10.7030276 9.5205537 3.8223325 6.8301615 11.6649536 10.0204321 10.3724664 10.0024952 3.2984384 6.5562393 12.9728639 12.3717679 10.4155762 9.7854075 0.0136250 0.1367200 0.1365100 -0.0164720 -0.0164720 -0.0654540 -0.0279510 0.0702900 1.7435000 0.0196360 0.0196360 0.0196360 0.1287300 0.0395130 0.8321400 0.0051509 0.3624700 0.0991350 -0.0566610 0.1919200 -0.0608890 -0.0542920 -0.0487550 -0.0077695 0.0044235 -0.0457770 3.0890000 0.0420170 -0.0015312 0.0136250 0.0136250 -0.0087988 -0.0164720 -0.0654540 0.0498170 -0.0279510 -0.0279510 0.0702900 0.0702900 0.1026300 0.0492140 0.1362700 0.0196360 0.0000000 0.0000000 0.0000000 -0.0522680 0.0395130 0.0395130 -0.0388570 0.0051509 -0.0621660 -0.0621660 0.0991350 -0.0566610 -0.0566610 -0.0631730 -0.0608890 -0.0542920 0.0448500 -0.0487550 -0.0077695 -0.0600830 -0.0457770 0.0420170 -0.1660000 0.2031900 -0.0680000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.8804605 12.4037805 -0.2251602 9.7685254 7.5364306 10.7759357 6.7692322 3.9041661 9.1639729 8.7056168 1.0968016 7.7348810 4.2667341 10.1417479 8.9988809 1.7748819 9.8951172 8.7944701 8.8951172 9.3812845 8.6913412 7.4543593 10.5591052 3.9843341 8.2219626 10.4744518 3.4753184 -0.2251602 11.1299551 3.3598444 13.5827373 12.2627194 8.1863901 9.9622315 11.3696705 9.8840571 4.9246273 4.0228028 -0.2251602 0.3598585 8.0180533 9.8179067 8.1455669 5.5692966 7.8596876 6.3294681 10.1296797 5.3140366 9.6069781 4.7056186 11.5403727 4.5297647 4.0228028 9.7010642 6.9892957 10.1163982 10.3733971 9.7840081 11.2071602 1.0968016 14.0002374 2.0968016 10.8382744 NA 9.0717956 5.6937434 7.8596876 8.0036978 11.6694717 10.6010306 8.5095890 12.0949747 10.3347344 10.3385523 9.1618197 10.3135533 9.7783972 11.4934122 13.7369168 12.1647795 9.3052857 8.0346224 0.3598585 7.5692951 11.0680636 10.923356 4.904161 9.023993 9.157503 8.425931 9.996303 9.451718 8.256679 11.007300 10.520133 1.582219 8.194840 8.740938 13.338374 11.632860 7.290579 8.575779 10.383596 10.336167 11.160521 9.463130 10.622720 9.758586 11.111386 10.954166 10.744985 8.997674 1.096802 9.601134 10.815854 11.432868 4.266734 10.962850 9.635966 7.974552 14.519526 10.209508 10.592662 12.832194 11.011193 9.350419 4.201148 TCGA-A2-A0SU 66 0 NA 1662 breast stage iia t2 n0 (i+) m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 6 3 1 1 1 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 10.1682549 9.6271468 11.8231012 9.5153299 8.8406486 8.7938393 10.5182971 9.6137337 10.5530221 12.9166712 11.8455508 10.5305251 1.5913443 13.2440187 4.0694100 9.0259941 8.2678265 8.3270428 9.4844505 13.5286870 2.2434558 14.6199625 5.0319377 8.8284050 10.6188769 7.7726953 -0.2159149 9.5841019 8.7670045 1.7840014 6.6969008 7.3036474 1.1059462 4.1059378 9.7162256 10.4818473 9.6349791 10.6141299 9.8467316 10.8784185 1.5913443 11.9963552 14.6018439 6.9255046 10.4831495 11.5474307 11.2798658 4.2434406 0.3689359 8.9539360 11.3883324 NA 10.8741232 4.5913683 4.9934660 4.4844475 9.9775362 12.0357891 10.8070721 11.1706817 12.9267561 7.0031794 11.2149860 10.9187965 11.3016802 10.7025015 4.6419910 11.9235622 12.1154877 NA 10.3149048 9.0647816 3.4278609 4.2434406 10.5275831 10.3031556 10.3904161 9.3385998 2.1059462 7.7352954 11.8912279 11.2574629 10.4524526 9.7577082 -0.01587900 -0.01587900 -0.01587900 0.00319100 0.00319100 0.00000000 0.00152550 0.00000000 0.00000000 0.00104850 0.00104850 0.00104850 -0.00069303 -0.00069303 0.00470050 0.00470050 0.00875280 0.00083195 0.00083195 -0.57071000 -0.00110870 3.33140000 -0.00207840 -0.00207840 0.52083000 -0.00899060 -0.00899060 -0.00899060 0.00458000 -0.01587900 -0.01587900 -0.00304750 0.00319100 0.00000000 0.00000000 0.00152550 0.00152550 0.00000000 0.00000000 0.00000000 -0.00055444 -0.00055444 0.01056400 -0.53794000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.55417000 0.00470050 -0.54472000 -0.54472000 0.00083195 0.00083195 0.00083195 -0.01106000 -0.00110870 -0.55707000 -0.57600000 -0.00207840 -0.00207840 0.00597000 -0.00899060 -0.00899060 0.52370000 -0.55146000 -0.57615000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7162255 13.2577166 8.3405169 9.1470505 4.1433199 11.3860137 1.7840014 0.3689359 8.5719134 7.9413575 NA 7.8311349 3.0319421 10.2279903 8.8105344 -0.2159149 7.8872986 10.4861835 11.0265896 10.9388290 10.3053119 7.0080128 11.4464567 2.1059462 10.5472232 9.4546672 4.8284031 -0.2159149 10.5759877 3.5388982 12.9528396 12.1283067 8.5422341 10.8392932 6.9688856 9.1260855 2.7840014 3.1059462 -1.2159149 7.7980311 9.0647816 9.7184389 10.6220329 4.8925367 7.0601350 6.6788283 9.9977226 5.0694143 10.8348798 1.3689918 12.8267817 2.6909087 5.3538667 10.1973372 6.5064084 2.8714691 9.1070656 7.6512892 6.0413985 0.7840014 14.2644224 0.7840014 10.2853504 NA 8.8886096 6.1503322 8.4078923 9.0682567 14.2691147 5.6419910 8.2393379 13.2440187 10.1373727 10.1677152 13.5286870 15.4511917 8.9327415 10.7741148 13.0368980 11.0443423 8.9539360 8.4792391 0.7840014 7.9413575 10.6388792 10.8484168 8.0531374 9.3153923 9.5280037 8.3192864 10.3912903 5.9132940 8.3424316 11.8455508 6.4350618 1.9539357 7.9861344 5.1647742 11.4766263 10.3834588 9.2808647 8.1633890 11.3289753 5.1763268 9.5871249 9.6349791 10.5157541 9.9407260 11.8780885 9.7367522 10.5388984 8.8820429 -1.2159149 7.8383436 5.0877895 10.8741232 7.4809784 10.4608494 9.9775362 6.8008197 14.5961631 10.3825287 10.2207223 12.8511090 10.1644719 9.1036831 -0.2159149 TCGA-A2-A0SV 63 1 825 NA breast stage iv t2 n2a m1 female 2006 NA yes infiltrating ductal carcinoma 8 white not hispanic or latino 1 3 1 2 1 5 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 6.589149e-07 3.81477e-07 10.0505764 9.3269427 11.2017564 8.1417710 8.8654558 9.1702275 9.2112021 10.1807557 10.6332409 13.1958430 10.8678467 10.6750465 6.5668319 12.7224764 2.2577046 10.3136108 5.8355629 7.7074461 9.4199336 12.2672721 1.3401634 13.5865633 1.8706606 9.8098667 10.7403204 4.8284386 0.7552294 9.6224688 13.0096774 -0.8298185 8.7803295 6.6048556 NA 2.2577046 9.2988663 9.9171617 8.8470661 9.6874047 8.2550361 10.1388943 1.4921608 8.3148859 15.0532168 7.1226489 9.3821158 10.5601277 10.2790787 3.7248140 NA 8.8203816 9.9388255 0.1701815 10.1667010 6.8671947 6.3698992 5.7248167 9.4434403 11.6614543 11.4383309 11.2943488 12.2357278 6.9743584 10.4659965 9.6271313 10.4243704 10.3833318 3.8981503 11.4752918 8.6869126 -0.2448560 10.5340886 9.9670784 2.1943708 6.4370146 11.0436716 9.3269427 10.3426551 9.7329470 7.6540431 7.2708896 12.6287623 11.8140837 10.0616315 8.9775825 -0.222810 0.641390 1.239100 0.106830 0.109640 -0.204230 0.723380 -0.245330 -0.546330 2.849000 -0.556770 1.806000 0.090141 -0.573180 0.071248 0.071248 0.071248 0.000000 0.000000 -0.573000 -0.569120 -0.172210 -0.598080 0.089127 0.089127 0.052668 0.015899 -0.224900 3.656900 -0.249580 -0.222810 -0.106700 0.120380 -0.256990 -0.204230 0.055800 0.063795 -0.245330 -0.546330 -0.570830 0.083920 0.082909 -0.591460 -0.568330 -0.568330 0.083342 0.083342 -0.573180 -0.573180 0.071248 0.071248 0.071248 0.059080 0.000000 0.000000 -0.597500 -0.552560 -0.569120 -0.172210 0.104970 -0.598080 0.089127 -0.568830 0.052668 -0.224900 0.704760 -1.292900 0.028336 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.219 1.811 -0.568 0.000 -0.022 -0.313 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.219 1.811 -0.568 0.000 -0.022 -0.313 8.5657617 14.1827211 6.7514276 9.6219539 2.6627296 10.0868534 0.4921096 NA 8.8149852 8.9175812 NA 8.0772686 7.5189560 10.9654555 9.3563417 3.8140787 6.8068525 9.5084069 8.9433667 11.0260693 9.0368574 6.1981326 10.4811243 1.8706606 9.8311148 10.0540164 1.1702456 NA 10.8953808 2.0771062 12.7619252 12.2909514 7.8758599 9.2610016 11.0280142 9.4205260 5.0405944 2.7551867 -1.8298185 11.0402069 9.0157175 9.7612823 8.5700394 2.1702135 8.1572358 7.4228931 9.9767772 5.0771191 9.9379981 -1.8298185 10.7159160 3.1702295 3.6620801 8.9573139 7.8134343 1.7551867 10.1984789 9.1460755 4.6131721 2.0771062 13.6623311 -0.8298185 11.2163284 -1.8298185 8.8689321 3.0771233 7.5123020 8.1200543 12.416318 7.034414 8.447515 12.722476 9.312335 11.831560 12.267272 10.291113 9.535456 10.513136 13.289412 12.041074 8.820382 8.244369 1.340163 7.545267 11.936860 11.317432 5.799585 9.055924 8.345153 9.720974 10.332062 7.034414 8.677031 10.867847 7.083117 NA 5.579618 9.205906 10.644440 10.030927 8.371126 10.035574 9.194675 5.257690 11.659798 8.847066 10.361904 10.164227 9.878880 9.822176 10.563618 8.513413 1.492161 9.311626 3.455636 10.166701 7.401449 10.531897 9.443440 6.915062 13.385078 10.616277 10.722657 12.902289 11.087040 9.156069 1.170246 TCGA-A2-A0SW 82 1 1365 NA breast stage iv t2 n2 m1 female 2006 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 6 3 1 2 1 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 10.4525435 9.6748068 11.7417627 8.8571546 9.0711381 9.4820512 10.1551358 10.4611002 9.8761377 13.8482125 9.1479014 10.8808447 -0.1885290 10.3693372 1.9813047 9.5005193 5.6187496 9.0933249 9.7728447 12.5406970 NA 11.9570087 3.3349544 9.5350901 10.6615818 5.4696060 0.8113888 10.1601065 10.2957143 1.8113888 7.4767308 7.5222017 NA 8.0353968 9.1117476 10.4284032 8.8666774 10.1923970 9.5737771 11.3619012 2.2708279 10.3236416 14.9022103 9.4718187 9.8516847 10.5837096 9.8000797 2.9813230 NA 8.3659838 11.3638239 -0.1885290 11.0311685 5.6940388 7.2830698 5.8337630 9.4952668 11.9192658 10.1157462 11.4729504 12.7832977 5.6817585 10.7688598 10.1681110 10.9400338 11.3263555 4.3659864 11.4389288 10.1157462 NA 10.0851905 9.1523576 2.8826430 5.8882099 10.5222013 9.5031384 10.6859922 9.9061324 2.1333334 9.3935370 12.2338540 11.2173342 8.6631439 9.9074512 0.2336500 1.0136000 0.4961400 0.0062481 0.0114000 -0.0022168 0.5271300 -0.0136770 -0.0046477 0.5095000 0.5095000 0.5362600 0.5067200 -0.0250720 -0.0081624 0.5222300 0.5222300 -0.0030475 0.9856400 -0.5967800 0.5422400 -0.5437100 -0.5619600 -0.5619600 0.7092600 -0.0179410 -0.0179410 -0.0179410 1.0146000 0.2643500 0.2336500 -0.3594300 -0.5559700 -0.0022168 -0.0110590 -0.0056757 -0.0094046 -0.0136770 -0.0046477 -0.0069195 0.4980500 0.5283600 0.5095000 -0.5690200 -0.5690200 -0.0202860 -0.0099565 -0.0147780 -0.0205490 -0.0137070 -0.0110600 -0.0132640 -0.0146410 -0.0030475 0.5032500 -0.0369460 -0.5377400 0.0050795 -0.5728900 0.0917350 -0.5619600 -0.5619600 -0.0283550 -0.0364010 -0.0179410 0.5281800 0.0054139 0.0079175 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.134 0.404 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.134 0.404 9.5579092 12.8060135 7.4588536 8.9001830 3.3963513 11.0347933 1.3963787 -0.1885290 9.1231432 6.8000793 -1.1886934 7.5198579 0.8113888 10.6982346 9.6155259 2.8113888 9.8351493 9.5057528 9.5721149 10.7908202 9.9440682 7.5960294 10.4891146 1.9813047 9.5902934 9.8014988 0.8113888 NA 10.9601893 0.8113888 12.5735693 12.9937893 7.0734893 9.4758422 9.9419655 9.7750135 8.5494871 3.2037180 -1.1886934 0.8113888 8.8337626 10.4877928 10.8410273 4.2037102 8.9004216 7.1467855 9.3944777 5.7886753 10.4316148 -1.1886934 11.1106030 3.8557904 3.3963513 10.1741990 6.1569325 9.9015074 9.4251844 9.6098667 11.8011442 1.1333005 13.9243231 0.3963787 10.9922365 NA 7.5256406 4.6940388 9.1254117 8.0012196 11.962191 6.403852 9.146785 10.369337 10.096179 11.236873 12.540697 10.059322 9.421091 10.170595 12.856131 8.522201 8.365984 7.448020 3.203718 7.721288 10.957645 10.4584035 7.9962701 9.2533017 5.2207865 7.9458213 10.4514636 7.7684967 7.0545685 9.1479014 8.4425720 -1.1886934 4.6187496 8.9012558 10.3236416 10.6086512 8.1534694 8.9146826 9.4722822 9.9894372 11.6114859 8.8666774 11.1601231 9.8747901 10.3515230 9.9869445 10.7854510 8.5528620 0.3963787 9.7478120 10.4001095 11.0311685 7.4767308 10.5692016 9.4952668 8.0995456 13.5075475 10.8693866 10.8053948 11.7423170 10.9319568 9.1645417 5.6940388 TCGA-A2-A0SX 48 0 NA 1534 breast stage ia t1c n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 10.3327746 10.1148657 12.1375613 10.1111005 8.2484518 9.3399415 10.1157011 10.7400678 11.2669941 12.5444787 11.3939656 10.9928629 2.1685779 12.0402713 4.0336521 9.8041746 7.0616704 8.5803995 10.7275533 8.3499159 2.5311444 9.6500971 9.7790835 9.7744041 10.9336944 3.7187781 0.9462068 10.5755502 10.6655824 2.7535404 9.0668634 8.2469272 5.2560482 6.3154268 10.0481693 10.7476324 9.2261911 10.7814545 9.5858357 11.8969924 0.9462068 9.0005719 15.0947363 8.3646083 9.1244269 11.2298607 11.1182043 3.9158172 -1.6389054 10.0801920 10.2323662 2.1685779 11.4325258 6.1026980 8.1111007 7.2860439 9.4599211 12.0335459 10.2438741 11.5808534 13.2465461 7.3555846 11.0290079 10.5742107 11.7586383 12.0241219 4.8369643 11.9635820 9.2277372 NA 10.1409504 9.5761572 4.0815101 6.5160498 12.1610186 10.6952249 10.3302578 9.9643937 4.4056248 6.4486945 13.8889219 12.0046363 9.7220781 10.0154195 0.097996 0.583920 1.397900 -0.420390 1.308000 -0.403890 -0.300000 0.024917 0.048919 -0.262920 -0.262920 0.382640 0.146910 0.146910 -0.181030 -0.120090 -0.120090 0.023336 0.000000 0.174470 -0.154560 -0.419630 -0.123100 -0.118820 -0.116960 0.639680 1.534600 0.065460 0.728040 0.106960 -0.037176 0.154660 -0.421710 0.425470 -0.329290 -0.588760 -0.287550 0.024917 0.048919 0.018290 -0.459540 0.148100 -0.489380 0.468210 0.488480 -0.124650 -0.124650 0.146910 0.137310 -0.263300 -0.155660 -0.445490 -0.445490 0.023336 0.000000 0.000000 0.089618 -0.154560 -0.093716 -0.092262 -0.123100 -0.118820 -0.402560 -0.574510 -0.524430 0.148850 0.102290 -0.430000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.489 0.102 0.344 -0.125 0.000 0.000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.489 0.102 0.344 -0.125 0.000 0.000 10.06599929 13.71551487 5.95368895 9.80106195 3.61598121 10.93440482 5.23159753 6.18141070 8.66729289 9.97317802 7.71658216 10.05745961 6.28009519 10.58070214 9.98556959 3.60916396 10.56090340 10.03939108 8.45794635 8.66729289 8.60551174 7.63269427 11.29326121 2.60916396 9.19728133 10.24310982 3.31542132 NA 10.63677359 4.00508554 12.44179878 12.25339437 8.25453263 10.41888439 10.78092791 11.01832615 6.87693066 2.82066914 -0.05379317 2.60916396 9.28381554 9.08744932 8.20672087 5.15564805 5.74493607 6.44869451 10.21219918 3.82065893 9.75783583 0.68320237 12.75482261 4.42731787 4.64663503 9.21869884 5.37044330 8.75997471 9.97640087 9.02300911 10.43704439 9.75730066 13.85783521 0.36120689 10.64026121 4.29197185 9.53490824 4.00508554 7.80831425 7.96856139 13.144691 9.095094 7.789591 12.040271 10.571598 11.241006 8.349916 11.083398 9.159703 11.429673 14.334233 11.693687 10.080192 8.212980 2.168578 7.689906 11.333672 10.9480708 5.2067214 9.0976329 9.7843469 8.9978558 10.6381638 8.5559879 6.9869399 11.3939656 10.9461935 2.4486896 6.1621315 9.3457634 13.5646555 10.8031377 8.4956572 8.6055947 9.5633549 9.2215422 10.7371801 9.2261911 10.4553087 9.7556938 12.7805988 12.8887081 10.9515842 8.8145017 0.6832024 9.4472942 10.0547180 11.4325258 7.5135160 10.7852949 9.4599211 8.0426274 14.1082174 10.5358447 10.0555890 12.8130217 11.0711764 9.7313735 5.5706845 TCGA-A2-A0SY 62 0 NA 1347 breast stage iiia t3 n1 m0 female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino 8 2 2 2 NA NA 3 4 3 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 4 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.155855e-06 1.005712e-06 9.61722115 9.48106095 12.06167931 8.98376832 8.91461953 9.21281200 10.64856116 9.92603249 9.92964500 10.21830797 11.80832515 10.68565839 1.28628976 14.65108373 3.52334867 9.94094017 5.23383822 8.18975588 11.19833809 13.59841730 1.64887955 13.69300271 4.92189329 8.16166300 10.70896970 5.03353753 NA 11.75750181 9.22041630 2.72687480 8.61080635 7.31815322 NA 4.68840419 9.92861386 10.31183923 9.64322776 12.45452858 10.09825216 11.28408851 9.62679009 11.40820765 14.87202124 8.42251895 10.44653581 10.59691698 11.04286051 4.83649983 3.68840419 8.77701197 12.20261022 NA 11.24609920 6.13716125 6.71735427 4.97080305 10.64887425 12.40004634 10.74133780 12.51546634 12.71600981 7.94042871 11.01422465 10.79106641 11.50010277 11.01227898 4.93837990 12.08454453 12.90998975 0.06391705 10.33498563 9.03641294 3.35325271 6.28630455 10.58158117 10.24340620 10.28992251 9.54167009 5.26030799 9.70114043 13.71047047 12.40459641 10.21111675 9.83374968 -0.00588010 0.62702000 0.63536000 0.00000000 -0.01230000 -0.01050800 0.01922100 0.00441480 -0.01009400 0.00930980 0.00930980 -0.00923180 0.01307400 0.01000600 0.00638710 0.00638710 0.00638710 -0.00650500 -0.00650500 -0.00193990 0.00263570 0.02146300 0.70326000 2.86080000 0.00597000 0.01153900 0.01153900 0.00970630 0.02482900 0.02988800 -0.00588010 -0.00373950 0.00000000 -0.01050800 -0.01050800 -0.01409000 -0.01409000 0.00441480 -0.01009400 -0.01009400 -0.00421700 -0.00526100 0.00930980 -0.00025184 -0.00025184 -0.00025184 0.00652620 0.01000600 0.01000600 0.00638710 0.00638710 -0.67947000 -0.67947000 -0.00650500 0.00249690 0.00249690 -0.00193990 0.00263570 0.01659000 -0.66541000 -0.66504000 -0.65594000 -0.70603000 0.01153900 0.01153900 0.02482900 0.00841480 0.03646600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7125690 12.8163621 8.5396451 10.0464301 5.1083070 10.7807312 4.5664133 2.1793837 8.7005365 8.0469052 1.6488796 8.5493118 4.7827283 10.0176233 9.4740097 2.0639171 10.2623568 9.1991936 11.6810731 11.1048863 9.5466526 7.4389515 10.6479347 3.5233487 7.4067271 10.0807200 4.8187994 NA 10.6223325 2.6488796 13.0546658 12.2696032 8.4316906 10.2367559 7.9322201 9.2838868 6.1371613 0.8009103 -0.5209764 5.3493157 9.0248790 9.7637734 10.5134044 6.1442850 7.0219816 6.1010008 9.7357476 4.9867431 9.7872883 NA 11.1409500 1.8008688 4.1228052 9.9631075 5.4224012 6.2271423 9.4411224 9.3615923 10.2810617 NA 14.6003007 1.6488796 10.1961972 -0.5209764 7.9301601 5.8712670 7.7386929 9.2822732 13.386779 4.938380 8.447616 14.651084 10.316037 10.686879 13.598417 12.235818 9.169820 10.629649 13.197857 11.194053 8.777012 9.220416 2.063917 7.048805 10.615940 11.21809699 7.18630840 8.77357014 8.96276503 7.59786410 10.50034228 7.75739868 7.71974064 11.80832515 7.04500276 0.47892005 6.91357759 7.01709903 10.65325084 10.25332455 7.71017068 8.30708557 11.98884794 6.61337547 11.14166212 9.64322776 10.54167000 9.84308392 10.94502575 9.58943262 10.43387260 8.60307067 0.06391705 8.84851403 8.63503243 11.24609920 6.59269174 10.48991086 10.64887425 7.10465850 15.07222366 10.19104626 10.20346314 12.33644435 11.05708603 8.86911816 3.28630455 TCGA-A2-A0T0 59 0 NA 533 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 4 5 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.022849e-06 1.005712e-06 10.18666199 9.15922803 10.71495982 8.53104648 8.78789146 8.83316018 9.56264426 10.39619203 11.69755982 12.84849511 9.92889066 10.74419053 -0.02488345 11.73908314 3.09065022 9.01043663 5.80806836 9.61301165 8.73673035 8.93807521 -0.02488345 12.19716901 6.56014174 9.08232657 10.41501010 5.03407482 -0.60977256 11.34985642 11.29560371 1.56012798 9.80648647 7.06969680 0.39022744 3.03407482 8.39162468 9.36678074 9.53932867 11.04530010 9.93179739 10.72783862 0.71211150 7.63814409 14.80303458 6.51314803 9.73284697 11.18137958 10.41327790 3.03407482 3.59967485 9.08892124 10.71552217 6.09065657 9.38810191 3.51950416 5.87403214 4.41258509 10.18463252 12.30963869 10.16500369 10.87705172 12.43264556 7.09411992 11.08021468 10.76974670 10.84913585 10.02048387 3.39021368 11.28162065 7.48824907 2.47767733 10.06440893 9.13840953 2.73576044 3.14510678 11.47784527 10.73949786 11.01820644 9.57385203 2.39022744 6.49350484 12.48429437 12.04853977 8.99754702 9.62802406 -0.55917000 0.50168000 0.77868000 0.01028500 -0.02205800 -0.00387790 0.02806000 0.72263000 0.52853000 -0.00484610 -0.00484610 1.48410000 0.99509000 -0.55717000 0.50099000 0.00083195 -0.00526100 -0.55367000 0.55904000 0.47959000 0.03157700 -0.54875000 0.00249690 0.00249690 0.71340000 0.47152000 -0.00415460 0.20660000 0.01391100 -0.56634000 -0.55967000 -0.00774820 -0.53987000 0.00194180 -0.58235000 0.01460200 -0.57130000 -0.56396000 -0.02109800 -0.57704000 0.02974700 0.00000000 -0.56618000 -0.55607000 -0.55607000 0.01883300 -0.58706000 -0.86192000 -0.57910000 -0.61949000 0.00083195 -0.00526100 -0.00526100 -0.55367000 -0.55595000 -0.54784000 -0.04888300 -0.55587000 -0.03607400 -0.56753000 0.06436800 0.00249690 0.00972760 -0.04820700 0.20660000 0.01106600 -0.00318590 0.39330000 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.409 -0.556 0.000 -0.316 -0.316 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.409 -0.556 0.000 -0.316 -0.316 7.14176077 13.31632732 3.78253438 8.79854632 NA 10.96030956 -1.60999274 7.18463239 9.51692108 9.32906124 -0.60977256 7.85241215 1.39022744 10.91304340 9.62323716 1.39022744 3.97518076 10.24157530 6.90196984 11.39373457 9.03796282 6.69855605 11.10767891 -0.60977256 8.32685459 9.67561889 -0.02488345 NA 10.27285976 2.63814336 13.39193273 11.66415792 7.19434811 9.40493462 6.96386365 10.31391561 2.84963904 0.97518994 NA NA 9.71045312 9.23570672 9.19030768 1.19755091 9.43568964 7.51433770 10.02593476 6.46167916 10.69399739 3.39021368 13.21567239 2.47767733 2.84963904 10.81174243 6.47353692 3.47767733 9.53551198 7.40423726 5.28503595 6.67098759 13.18351516 3.88206586 11.39531488 -1.60999274 9.82380205 3.63814336 9.30982488 8.30460185 11.656620 8.178119 8.672147 11.739083 10.211604 12.205300 8.938075 10.009061 9.494160 9.754351 13.076279 13.280101 9.088921 8.980804 2.849639 8.298609 11.543769 11.0663942 2.9137798 8.4656958 8.6756187 8.9562707 9.4401809 6.1384090 3.9137798 9.9288907 5.9448046 3.6381434 7.3001100 7.7676224 11.6459829 10.5654543 8.2774371 9.4542857 8.0502127 4.8331583 10.5915596 9.5393287 9.7200130 10.6033209 9.9404825 11.2478090 10.7383916 9.0705761 2.4776773 9.5107203 4.4563068 9.3881019 7.1215356 10.2563364 10.1846325 7.7300666 13.7309013 10.0670553 10.6999772 12.4545384 11.2916493 9.2644297 -0.6097726 TCGA-A2-A0T1 55 0 NA 521 breast stage iiic t3 n3 m0 female 2009 NA yes infiltrating ductal carcinoma 10 american indian or alaska native not hispanic or latino 6 3 2 4 1 6 2 6 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-07 1.733986e-07 9.807181 9.467350 11.466013 8.761844 8.295706 9.480268 10.474203 9.700173 11.410125 12.559922 9.898895 10.335560 1.905120 17.180843 3.627572 9.868581 2.670636 8.349708 4.465824 12.156708 2.670636 11.627744 8.246737 9.514884 11.112122 7.528623 1.753091 12.986669 9.909609 2.168129 8.869737 7.602770 NA 7.034391 9.715036 10.664663 9.468113 9.493822 9.483291 11.102078 2.168129 9.220710 15.556103 6.251922 9.542457 11.023529 10.134407 4.042609 6.050785 8.695619 10.680882 -1.416962 10.534464 5.670642 7.459696 6.168143 9.524960 11.240051 9.536648 11.712301 12.563854 7.075032 10.837322 9.893792 10.659327 10.745885 3.338068 11.315983 9.398562 1.390558 10.573992 9.784690 2.754717 6.304279 11.135128 9.551126 9.759352 11.009444 2.670636 10.433366 12.495320 11.492135 9.471922 9.141600 -0.0556340 -0.0556340 0.1640000 0.0708850 0.1717400 3.5601000 0.1134500 -0.0082211 -0.0089906 -0.3888400 -0.3848100 0.5958400 0.1293300 0.1293300 0.1630900 0.1630900 0.1630900 -0.0103370 -0.0078863 0.0221640 -0.0092868 0.0049969 -0.1026300 3.6569000 0.0892720 0.0659420 0.0659420 0.0659420 0.0983120 -0.0556340 -0.0556340 -0.0029091 0.0398350 -0.1941200 -0.1829500 -0.1172900 -0.0045695 -0.0082211 -0.0089906 -0.0089906 0.3543000 0.3508800 -0.3858900 0.1685000 0.1561600 -0.1899000 0.1670000 0.1293300 0.1293300 0.0000000 0.1630900 -0.1907400 -0.1818100 -0.0103370 -0.0078863 -0.0118250 0.0221640 -0.0052610 0.0049969 -0.1932500 -0.1026300 0.0892720 -0.0116110 0.0659420 0.0659420 0.0983120 0.7750200 0.2415600 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 -0.141 -0.141 0.000 0.000 0.000 0.000 0.270 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.191 -0.191 0.000 0.000 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.318 0.000 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 -0.141 -0.141 0.000 0.000 0.000 0.000 0.270 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.191 -0.191 0.000 0.000 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.318 0.000 9.9516857 13.7854943 5.2556027 10.0492557 6.0426115 11.2661737 2.1681285 NA 9.1387269 8.7593523 NA 7.9363258 8.1203976 10.5543634 8.9776420 1.7530910 10.3484653 8.9851252 10.2396040 12.0755331 8.6650754 6.8915176 12.0876258 2.5831821 9.2740501 10.3901315 3.5373706 -1.4169624 11.2982832 1.3905576 12.5736377 12.5675086 8.3178888 9.6533001 9.3355599 10.0415858 1.1681285 3.3905301 -0.4167698 7.4442662 8.7816243 10.0250858 10.0929541 5.2270363 8.2189337 9.2449572 9.5540040 6.9495011 9.2270354 -0.4167698 9.7987122 3.5831821 3.9754926 9.5652316 6.9104173 8.4192296 10.2814497 9.9652628 10.8316998 2.7531124 13.3783057 1.5831821 10.2723035 NA 9.3856955 4.9051054 7.2161745 8.2661737 10.658053 5.338068 10.461230 17.180843 9.657321 10.584235 12.156708 9.064978 9.392143 10.051803 12.646153 9.283619 8.695619 7.886960 4.390537 7.034391 10.872910 11.824716 4.583182 8.792633 8.807181 8.786809 10.849837 8.416069 6.831107 9.898895 6.882387 1.583182 9.207061 7.438235 12.278299 10.901157 7.393751 9.834662 9.038506 9.245848 10.750754 9.468113 10.314498 10.277972 10.652629 10.556159 10.914936 8.537376 6.873198 9.674714 9.257371 10.534464 6.831107 12.092954 9.524960 7.022179 13.623555 10.599987 10.241837 12.220823 10.615914 9.600684 4.773005 TCGA-A2-A0T2 66 1 255 NA breast stage iv t3 n3 m1 female 2009 NA no infiltrating ductal carcinoma 10 white not hispanic or latino 4 4 4 5 1 3 2 5 1 2 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 4.855162e-07 2.774378e-07 10.3737292 8.5539591 11.7463369 7.8485910 8.8132810 8.1744204 9.0931365 9.8548559 11.7498896 13.0165767 9.6491529 9.8492883 1.6419159 11.9031807 1.6419159 11.4916655 7.9843176 8.7519423 7.5522472 3.3581290 NA 11.9388415 10.2681559 10.5342773 10.5276217 7.9689968 0.4195389 9.0693877 11.2410412 2.5350078 8.9060328 7.6987567 NA 2.9220265 8.3163698 9.3561709 9.1621229 10.6253261 8.4326229 11.2993713 3.4195389 3.4784283 14.8569382 6.1848020 10.3374021 10.5641911 9.4520377 3.2940031 NA 8.9919172 11.2650229 -0.1653697 8.9233587 5.1383517 6.3423645 4.2940031 9.1257410 11.5195381 9.9925488 11.3244183 11.9215359 6.8118499 11.7998135 10.9130548 10.1649270 10.6547493 3.6925499 11.8186327 8.6658777 NA 10.5505324 8.8789644 3.7429009 3.6419275 11.0320942 9.3669263 9.9535114 9.5768798 2.2939884 8.6894386 13.0326317 13.3850166 9.9140551 10.4954576 2.9355000 2.7996000 -0.0317680 -0.0257560 1.2730000 0.0000000 -0.1185800 1.2526000 1.2526000 1.2456000 1.2456000 1.2456000 3.3495000 1.2161000 1.2254000 -0.0418290 -0.0418290 -0.6627200 -0.0027707 -0.0195160 -0.0291790 1.1481000 -0.0415670 -0.0415670 -0.0415670 -0.0276710 1.2210000 1.1624000 1.1839000 1.0960000 1.1030000 -0.0086008 -0.0217840 -0.0770780 0.0000000 -0.0210980 -0.0210980 1.2526000 1.2526000 1.2535000 1.2257000 1.2504000 1.1495000 1.2125000 1.2237000 -0.0305400 -0.0456730 -0.0373540 1.1868000 1.2254000 -0.0418290 -0.0399370 -0.0399370 -0.0321740 -0.0052967 -0.0463650 0.0072217 -0.0291790 -0.0614200 -0.0903420 -0.0415670 -0.0415670 1.1807000 -0.0257560 1.2210000 1.1932000 2.0158000 -0.0748110 2.213 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.180 0.000 0.000 0.000 1.165 1.165 0.000 1.162 1.112 1.112 1.193 0.000 2.016 0.000 1.229 0.000 1.270 1.270 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 0.501 2.213 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.180 0.000 0.000 0.000 1.165 1.165 0.000 1.162 1.112 1.112 1.193 0.000 2.016 0.000 1.229 0.000 1.270 1.270 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 0.501 7.4455951 12.9750807 2.9220265 8.4748152 1.9572460 11.9890721 -0.1653697 7.8679934 9.2182748 9.0513164 1.4195389 6.7829379 5.6289864 10.4363411 8.6737741 0.8345494 5.8232551 10.0954899 9.0317872 10.1666069 8.4540385 7.0488890 11.8276857 0.8345494 7.0681903 9.3042121 1.4195389 NA 10.5886227 2.1564937 13.0587228 13.1989103 7.6674607 10.4015758 8.6483515 10.0937251 5.6547506 2.9220265 -1.1655315 -1.1655315 8.7248348 10.4566222 7.8652378 2.5350078 9.9253510 9.2193542 9.6964328 6.2775143 9.1598759 9.3284259 10.6867097 0.8345494 3.7414562 10.7346824 7.4549737 1.1565261 9.8686815 7.2225872 4.8569359 11.2608351 14.0310188 3.6925499 10.4784265 -0.1653697 9.6167495 5.0243950 8.7593829 8.0268631 10.6019148 8.6515540 8.1406319 11.9031807 9.8039569 10.5718178 3.3581290 10.1036971 8.7712082 9.9286481 13.4128841 9.7110874 8.9919172 7.5726623 0.8345494 7.0729751 11.1423404 10.482029 4.192123 9.451119 8.560789 7.029327 9.414263 5.342366 7.478427 9.649153 10.380983 NA 9.463016 7.850543 11.343603 9.961275 7.554438 9.659529 7.396813 3.741456 10.454231 9.162123 10.218814 10.199799 11.546882 10.531538 10.430760 7.932602 -1.165531 8.476586 3.641927 8.923359 4.922031 10.134923 9.125741 7.702189 15.024877 11.013857 9.621657 11.953998 10.622473 8.289898 2.641916 TCGA-A2-A0T3 37 0 NA 1516 breast stage ib t1c n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 1 NA 2 4 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 3.467973e-07 10.4558252 9.9135631 12.0014109 9.3255587 8.9658971 8.7175750 10.9119260 10.4991489 9.6696621 14.0677677 11.7812163 10.8662808 2.4094996 12.6290281 2.9070060 8.8937936 7.4894586 9.0337077 8.5770692 12.5578307 NA 13.2549937 3.9658951 9.4532418 11.4852188 6.0635073 0.3220435 9.2907075 12.0407877 2.5699771 8.4590320 7.2762370 0.3220435 3.7483002 9.7778817 10.6801425 9.6529577 10.2733255 10.1091272 11.5892664 3.4919685 11.8362617 14.2924613 8.4939307 9.2549936 11.8029572 10.8945042 5.5508607 6.0769289 9.0827609 11.6578498 -1.6780719 10.8730280 4.0224832 5.2645552 3.8766250 10.3437148 12.1060621 9.7367261 12.4184266 12.9029471 7.4666989 10.8458478 10.8156436 11.4830152 11.4317082 4.9658951 11.5511600 10.6754634 -1.6780719 9.8861903 9.7148949 3.3224906 3.4094996 8.7143582 10.3877935 11.0735849 10.7814724 1.4919557 10.6638375 12.9177062 13.0347290 9.6773920 9.3691648 -0.0254830 0.6441400 0.5983600 -0.3513300 0.3210900 1.4653000 0.3448600 -0.3586300 -0.3411300 2.8821000 0.6198800 1.2657000 0.5670300 -0.3484700 0.9119800 3.6569000 -0.3775200 -0.0256200 -0.0250170 0.0183830 2.1119000 -0.0412090 -0.1141700 0.4602400 1.8520000 0.3933000 0.5547800 1.4281000 1.9870000 -0.0254830 -0.0254830 -0.0711360 -0.3513300 -0.7958600 1.4576000 -0.0332690 -0.0332690 -0.3586300 -0.3411300 -0.3803300 -0.7021700 0.9277200 -0.7602100 0.6443300 -0.0444150 0.5827400 0.5708500 -0.3484700 -0.3493900 0.9119800 -0.4512500 -0.3775200 -0.3775200 -0.0256200 -0.0250170 -0.0250170 0.0183830 0.5807700 -0.7313400 -0.0818710 -0.1141700 -0.2162700 -0.0059522 -0.2511600 1.4281000 -0.3740300 0.5661400 -0.1101100 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.837 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.161 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 -0.712 1.461 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 0.181 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.837 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.161 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 -0.712 1.461 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 0.181 7.83774082 13.38189223 10.54634399 10.19663802 3.16803223 10.62124887 2.84561048 0.32204351 9.22742774 7.99092594 NA 7.81297177 1.32204351 10.50536608 9.59525356 1.64394852 6.92566718 9.51925745 9.71435818 9.46797290 8.76434151 8.51309986 10.83231045 -0.09295553 8.83379331 9.95821223 4.55085758 NA 11.52293941 3.74830021 12.04260573 12.26308841 7.61895733 9.18002177 8.10340060 10.68014253 4.29931793 0.90696754 -0.09295553 2.78146463 8.67959270 7.95139721 9.56996836 4.51186648 6.26338189 4.58882855 10.79219122 5.27623609 10.86241102 0.32204351 11.51725920 4.45132323 6.76083303 8.93186592 5.54507567 2.64397160 8.32626139 7.05675042 6.32204170 2.64397160 12.90735549 0.64394852 10.73487522 NA 7.44098209 4.12939843 7.56996798 8.89758018 15.723540 7.648470 9.358901 12.629028 10.330329 10.513100 12.557831 11.222530 8.556858 10.917065 12.743317 11.782113 9.082761 6.990925 1.781486 8.692728 11.884641 11.5410580 6.8138940 8.7711893 8.7143582 9.7737671 10.6964528 5.0769267 10.6735322 11.7812163 7.9604770 1.3220435 6.4409821 8.5430960 12.8408169 9.7089811 10.8548837 9.6275326 11.5851633 4.6258199 11.3609838 9.6529577 10.7608327 9.9975569 10.1481921 9.5693751 11.3341415 8.9376704 1.1294149 9.2514694 4.5314938 10.8730280 7.0668749 10.8876189 10.3437148 8.0051406 13.3184702 10.0702337 9.7947317 13.0428729 10.9105212 10.2871035 0.9069675 TCGA-A2-A0T4 62 0 NA 624 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 1 2 2 2 1 4 3 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 6.242351e-07 2.427581e-07 9.3466230 9.6689835 11.2136006 8.8011305 8.6410369 9.4142286 8.7692111 9.6818995 9.9874478 10.7586834 11.4669172 10.3082658 2.8719619 12.9981588 3.8230564 10.3121477 7.1745333 8.4142286 6.7266310 12.5674309 0.5500141 13.9038326 5.2130089 9.3372267 10.4337040 5.0311702 0.9651009 10.6206107 9.7107543 4.6375059 7.6724395 7.0418957 NA 4.3226348 9.4286043 10.2870081 9.6507048 10.9039245 9.0108397 10.6989428 2.2869994 9.8484870 14.5271137 6.9696375 9.5714853 10.8947083 11.0200234 4.7464418 5.6655207 9.1487153 10.8319725 NA 11.2274685 5.7724347 6.1449885 5.1745343 10.0108397 11.9617300 10.4357389 11.7782600 12.5956884 8.7594958 10.6676856 10.1604522 11.3718165 10.1920942 3.9650824 11.8867350 11.8166339 0.9651009 10.5330361 8.7132727 2.6666203 5.8958164 10.3876705 9.9337469 9.8980330 9.6480746 4.1745343 8.4925570 12.6509238 11.9516332 10.1052707 9.5187094 -0.50266000 0.51385000 0.51385000 0.00722170 0.00467120 0.00055459 0.00624810 -0.51074000 -0.51146000 0.00423500 0.00423500 0.00423500 0.00610900 0.00610900 -0.00581400 3.65690000 3.65690000 0.00000000 0.00000000 0.01014600 -0.01285100 -0.01945200 0.01173200 0.01173200 0.01028500 -0.00315840 -0.00221680 -0.00221680 0.01476900 -0.50266000 -0.50266000 -0.00443120 0.00722170 0.00055459 0.00055459 0.00624810 0.00624810 -0.51074000 0.05779600 -0.51280000 -0.00041585 -0.00041585 0.00423500 0.01195800 0.01195800 -0.00374990 0.00680440 0.00610900 0.00610900 0.08189900 -0.49788000 -0.50173000 -0.50173000 0.00000000 0.00000000 0.00000000 -0.50318000 -0.00722000 -0.02971300 -0.50380000 -0.50277000 0.01173200 -0.49830000 -0.00315840 -0.00221680 0.04755200 0.01126100 -0.22392000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.50132728 13.49310672 8.88543282 10.40127100 4.21300504 9.65507790 2.28699940 2.66552921 8.48668059 10.09242959 NA 7.97910046 5.97630635 10.44939939 9.02982279 2.66552921 9.01220382 9.08920125 10.63794727 10.40491089 9.34821183 6.69978897 11.55285754 2.55003873 8.96508008 9.90465916 4.32263484 0.55001409 10.85762284 3.21300504 12.76040946 11.82442065 8.35739761 10.45392433 9.66725279 9.49255704 4.05254632 2.55003873 -0.03489914 7.73656970 8.69129826 9.30604277 10.02374826 6.74643908 7.33898947 7.97350853 10.03385836 5.67932527 9.95234405 -1.03504695 10.56173567 2.28699940 5.56499390 10.03102790 7.20934906 4.05254632 9.92942087 8.68275657 6.74643908 -1.03504695 14.01904831 1.28699940 10.34066251 NA 7.08402067 5.79797013 7.87197052 9.35309741 14.3174656 6.5119740 8.3638238 12.9981588 10.3345302 11.1739240 12.5674309 10.4654240 11.2118206 10.6542044 13.2909476 11.4576843 9.1487153 8.7497149 0.5500141 7.1148272 11.0482269 11.299912 6.706547 8.444860 8.754614 8.966488 9.806495 6.816829 7.804284 11.466917 7.919276 5.231866 4.665518 7.245387 11.285881 10.137507 8.969300 9.240040 11.448896 6.542509 10.918320 9.650705 10.568706 8.124952 11.470892 9.901718 10.428604 8.300470 1.286999 8.858609 5.391345 11.227469 7.416291 10.751758 10.010840 6.448896 13.673248 10.052543 10.169651 12.676639 10.542981 9.282493 1.286999 TCGA-A2-A0T5 39 0 NA 531 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 3 3 1 1 4 3 4 NA NA 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 5 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3.547736e-05 1.127091e-05 9.9166797 9.2972836 11.7450353 9.1061910 8.5728090 9.6082981 9.7767242 9.2513991 10.8713324 12.6565277 11.1204422 10.3856809 3.8668289 13.2681373 3.1887649 9.2322787 7.6844541 8.2981199 9.5271836 12.5913449 4.0043306 13.8553737 4.7543584 9.6450396 10.7291585 5.8022915 NA 10.6616401 9.6566907 3.7148280 9.0226613 8.7963852 1.7148390 4.7148280 9.3401309 9.9084902 10.0312353 10.9603807 9.9112252 10.7919404 8.7916435 11.5068952 15.4912267 7.6142453 9.8679578 10.6326973 11.1986438 4.9199407 2.1298765 8.6984550 11.2781302 NA 10.9839547 4.3777901 4.1596130 4.9542940 10.3638845 12.2994774 10.9617005 13.0077886 12.7952754 7.1373601 11.1912367 10.6579940 10.9574728 11.1533888 4.2997868 12.3283105 11.9682816 -0.4550201 10.1819806 9.3825309 3.7547486 3.0684645 11.7791216 10.3678721 10.2880543 9.6709621 5.7928293 9.7975685 12.7030393 11.9034168 10.0782327 9.9595882 1.27340000 1.58380000 1.59730000 -0.00235530 -0.00235530 0.00221930 0.00652620 -0.01092700 -0.00429290 0.57156000 0.57156000 0.57156000 -0.00806000 -0.00170300 0.00000000 0.00000000 0.00000000 -0.00429290 -0.00429290 0.00249690 0.00427280 0.00069327 0.00097064 0.00097064 0.00097064 0.00277450 0.00277450 -0.00415460 -0.00055444 0.00127730 -0.00346270 0.00319100 -0.00235530 0.00221930 -0.01362800 -0.00352130 -0.00352130 -0.01092700 -0.00429290 -0.00832100 -0.00124730 -0.00124730 0.58148000 -0.00083160 -0.00083160 -0.00226280 0.00041593 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 0.00000000 -0.00429290 -0.00429290 -0.00429290 -0.00124750 0.00958830 0.00069327 -0.60931000 0.00097064 0.00097064 0.00624810 0.00277450 -0.00415460 -0.00055444 0.01056400 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 0.000 8.7676978 12.7360393 8.0645391 9.8134450 0.5734715 10.9667049 2.3522500 3.6741894 8.9068467 8.2914171 -0.4550201 8.0765965 2.4518046 10.3958712 9.2796127 1.1298765 6.3903925 9.1194965 9.9372203 10.5547316 9.3917018 6.6793295 11.2246030 3.4517914 9.9468491 9.9237397 9.7821130 NA 10.8509646 2.5449057 13.8069978 12.6541623 7.7047745 9.7549655 7.0043351 9.4910782 3.9711664 2.0043216 -1.4552179 8.2243833 8.6638441 10.0487287 9.9532326 3.2997868 7.8285472 7.1778979 10.5030932 7.3554744 9.6008633 0.5448810 10.3646830 3.6323613 4.7148280 10.1469569 6.9463800 2.8668289 8.8577860 7.6481907 5.6323671 1.1298765 14.8450231 -0.4550201 9.8707705 -0.4550201 8.3888241 5.9112242 7.7421194 8.7371956 13.750815 5.556129 8.911225 13.268137 10.393033 11.575915 12.591345 12.196515 9.610992 10.594411 13.232825 11.763012 8.698455 8.849825 3.499093 7.380954 11.267284 11.231841 6.778523 9.142024 9.271973 8.703513 10.644704 6.600185 7.816366 11.120442 7.248806 4.299787 8.900254 6.579756 12.957671 9.872456 9.603571 8.546311 11.253771 4.377790 10.156071 10.031235 10.407928 10.392352 11.040758 10.487051 10.956943 9.460782 -1.455218 8.858568 5.036754 10.983955 7.380954 10.518213 10.363885 7.650811 15.121742 10.200881 10.453671 13.241219 11.086000 9.584507 -1.455218 TCGA-A2-A0T6 50 0 NA 575 breast stage iib t3 n0 (i-) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 2 2 2 2 3 4 2 4 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.843738e-06 7.282743e-07 10.6202775 10.4218817 12.1934628 10.1578296 8.2768558 8.8005402 10.1597371 9.8353287 10.0926229 11.5711003 11.2231379 10.5939951 5.6663589 13.5771793 4.1069345 10.0554005 7.2018191 8.7738866 9.5124456 12.8377137 -1.7259471 13.7024337 4.8887530 9.4897619 10.7216406 8.1824336 -1.7259471 10.5022491 8.6116626 3.8590054 8.3825652 7.7334723 -0.7259471 5.1929043 10.2216777 10.1699946 9.9196993 11.7912180 8.9951399 12.0278843 NA 9.5801025 14.9381408 7.6950744 10.5142299 11.8865638 11.6429564 5.2513214 2.6663476 9.5703834 11.3505224 -0.1409846 11.4776946 6.4489670 7.5124458 5.5594429 10.8566532 11.8193673 10.6596336 12.3277121 13.0085916 7.9640387 11.4123126 10.9530436 11.4452176 11.3573539 5.5869238 12.2020964 12.1586883 0.8590154 10.4228351 9.1604995 3.7364209 6.1688586 10.5712436 10.2648539 10.3009100 10.1265703 4.8739559 8.7024009 13.3513989 13.6205545 10.2383817 9.5903223 -0.00235530 0.53696000 0.53925000 0.00000000 0.00000000 0.00374650 0.22191000 0.00013863 -0.56724000 0.22237000 0.22237000 0.22237000 0.00027728 0.00650530 -0.03749000 -0.03749000 -0.03749000 -0.01216200 -0.01216200 -0.00360110 -0.00287000 0.00388540 0.02188400 0.02188400 0.02188400 0.46084000 0.46084000 0.51054000 -0.00249380 -0.00235530 -0.00235530 -0.00069303 0.00000000 0.00374650 -0.00110870 0.22191000 0.22191000 0.00013863 -0.56724000 0.00513590 -0.00027724 -0.00110870 0.22237000 -0.00147970 -0.00147970 0.00221930 -0.01865500 0.00650530 0.01670500 -0.03749000 -0.03749000 -0.03749000 -0.04307400 -0.01216200 -0.01216200 -0.01216200 -0.00211550 -0.00287000 0.00388540 -0.56414000 0.02188400 0.02188400 0.00232880 0.46084000 0.49905000 -0.00249380 -0.00027724 -0.56664000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 0.000 10.0083269 13.8966360 10.7182792 10.3333853 4.7334737 10.3320325 3.9464689 0.2740529 8.3588490 8.9900027 -1.7259471 8.8362928 4.8286316 9.9653481 9.6982070 4.5959690 10.3952505 9.3279666 12.1104857 10.1745303 9.3042664 8.2003366 11.1291039 4.2740380 8.9169949 9.6961055 3.9178995 NA 10.5495833 3.2282338 12.6190994 11.9493363 8.6049575 10.1861816 8.5501654 9.5577080 4.5219678 1.0814078 0.5959810 7.8552416 9.1108802 8.9169949 9.9644753 5.4834934 7.9341974 5.8362827 10.2128852 6.5172143 9.4483422 NA 11.0523233 4.8739559 4.5028588 9.5606389 5.8045647 5.7252531 9.7221571 9.3232086 7.2224076 NA 13.7141313 0.8590154 10.0011103 NA 8.8228627 5.2740417 7.8813710 8.8324616 12.020881 4.700307 8.216555 13.577179 10.301256 10.553071 12.837714 11.191786 9.299872 11.349687 13.737374 11.129104 9.570383 9.716984 NA 7.251320 11.465408 11.3921707 7.4514601 8.8034712 9.2950207 7.6337901 10.6796875 8.0846123 6.9142859 11.2231379 6.7658940 3.7976045 5.8286290 5.8611812 13.6693406 10.8972364 7.9848474 8.2810681 12.3796219 7.3102147 11.7352260 9.9196993 10.2644994 9.5495833 11.2514996 10.0822005 10.8059096 9.3753599 0.2740529 9.5354657 7.1320215 11.4776946 8.6469057 10.2183611 10.8566532 7.7169840 14.0144013 9.7951503 10.5013558 13.2524831 11.0922235 9.7472392 2.7334628 TCGA-A2-A0T7 51 0 NA 631 breast stage iia t2 n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 1 2 2 2 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 10.7590047 10.3868521 11.7182735 9.7471724 8.3467703 9.1025584 10.2221701 9.6827115 10.6096446 14.2311914 10.3180027 10.8056199 4.9898565 12.8468778 2.6008168 10.7219793 5.8738353 8.7408544 11.0122260 12.7256142 2.9089474 13.2235214 7.8914933 9.3141713 11.8578669 7.2718934 0.2085173 11.4084775 10.8401303 2.9089474 8.9406660 7.6535137 1.2085173 3.9089378 10.5128498 11.0983826 9.7816723 11.3518817 9.4682418 11.2320796 2.4564382 8.5975919 15.2328915 9.0935847 9.3202861 11.3108023 11.5434700 4.9089378 3.9633816 9.2866492 12.0775139 -1.7913579 11.3450090 6.2906474 6.0602485 7.2197261 10.5137052 11.7919339 10.6255598 12.3911256 12.7243830 8.4469034 10.9943596 10.5375015 11.3015859 11.1950516 5.1742826 11.9629685 10.4682417 0.2085173 10.5780958 10.1048309 3.0931038 5.4276665 11.0140408 10.1462401 10.2339841 10.8910542 3.7934590 7.8667102 13.3762694 12.7931674 10.0884646 9.7068491 0.1091600 0.6752400 0.4117300 0.2258700 0.1994900 -0.1622200 0.6334700 0.1363800 -0.3828300 -0.3751900 -0.3751900 1.9980000 0.1334200 0.1169700 0.1325300 0.1325300 -0.2567600 -0.3511400 0.4486200 0.1762800 -0.0638810 -0.3431200 0.3529400 0.1811600 0.2314300 -0.2827900 -0.2827900 -0.2827900 0.4812500 -0.3113500 0.1178000 -0.0529450 0.2258700 -0.1619600 -0.1622200 0.2089600 0.2089600 0.1363800 -0.3828300 -0.3828300 0.0900930 -0.3819400 -0.3751900 -0.2047000 -0.0445950 -0.0445950 0.0773830 0.1169700 0.1457300 0.1325300 0.1325300 -0.2750100 -0.2750100 -0.3656400 0.4486200 0.5828100 0.1762800 -0.0638810 -0.3435800 -0.3234100 -0.2029000 0.1811600 -0.2044300 -0.2827900 -0.2827900 0.2166300 -0.0088976 -0.2520500 0.117 0.117 0.133 -0.124 -0.351 0.097 -0.384 0.000 -0.344 -0.062 -0.323 -0.062 0.141 -0.198 -0.198 -0.283 -0.283 0.109 1.092 0.188 0.188 0.000 -0.277 0.000 0.000 0.203 0.203 -0.162 -0.162 0.612 0.237 -0.383 -0.383 0.000 0.000 0.432 1.954 0.000 0.000 0.177 0.000 0.117 0.117 0.133 -0.124 -0.351 0.097 -0.384 0.000 -0.344 -0.062 -0.323 -0.062 0.141 -0.198 -0.198 -0.283 -0.283 0.109 1.092 0.188 0.188 0.000 -0.277 0.000 0.000 0.203 0.203 -0.162 -0.162 0.612 0.237 -0.383 -0.383 0.000 0.000 0.432 1.954 0.000 0.000 0.177 0.000 9.0703609 14.4028129 7.3480500 10.5273236 3.1091265 11.5961119 0.7934381 1.7934798 8.7428012 9.3784234 0.2085173 10.2659216 3.5660479 10.3173495 9.3416407 3.2529000 8.2906474 10.0815580 9.7505630 9.4799615 9.1611888 7.2474177 11.0388156 2.3784284 9.6013526 10.0065652 4.1626934 NA 11.0730716 4.4752860 12.1127567 12.1534850 7.9158579 9.7549107 8.4973645 8.8195232 5.8232093 2.2084860 -1.7913579 9.5360512 7.8949990 9.3821757 10.1052092 5.2084978 9.4855882 7.8809236 10.0366349 6.8084108 9.9550128 1.9089282 12.1281067 3.4564251 4.0664767 8.8747758 6.1944535 3.4939035 9.9342908 7.9227438 5.4939003 1.3784006 13.6419209 -0.2065619 10.3690002 NA 7.3038958 6.4752843 8.1407132 8.5759132 12.276108 5.306532 7.986575 12.846878 10.157596 10.584081 12.725614 11.259027 8.668954 10.686257 13.528735 10.792286 9.286649 8.278620 2.667938 7.451673 12.879265 11.451524 7.130339 9.436716 10.377797 8.814904 11.060101 7.019070 8.813052 10.318003 6.908938 4.475286 6.789699 8.072189 11.858877 10.472941 9.023882 9.216927 11.219726 4.976684 10.895043 9.781672 10.406636 10.202145 11.232772 11.437317 10.943843 8.767876 5.548347 9.055031 5.684232 11.345009 7.931306 10.505701 10.513705 8.092669 13.795426 9.683725 9.902421 12.821137 10.533242 9.730590 1.793480 TCGA-A2-A0YC 59 0 NA 990 breast stage iib t2 n1mi m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 5 5 2 3 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 6.935946e-08 11.1125197 9.8989440 12.1839158 10.1831210 8.9096609 9.8088432 10.5735696 9.4644132 10.0840395 12.9579581 11.3315686 10.6176369 -0.2273542 13.8308305 3.3971595 9.2142307 7.4284984 8.3053504 9.1469846 13.4455001 4.6139736 13.6360171 4.3169929 9.0194737 11.2302216 8.5960369 -1.8124856 9.4643667 9.8079271 1.5096452 7.1331515 6.5800249 NA 4.9821220 9.9946595 10.5556679 10.1114061 10.8012664 10.2107684 12.0132623 -0.8122323 11.3245381 14.4098417 8.4721843 9.6342736 9.8618994 12.1171505 4.4914876 4.8601335 9.2279968 11.2500906 -0.8122323 12.2312472 5.1877084 6.3676157 5.2429911 10.5391986 11.9467631 10.4287966 12.1315040 13.0302539 7.6368559 10.9200866 10.6632354 11.3560659 11.6063504 5.4261104 13.2503015 6.5928487 NA 10.6458574 8.8387589 3.2781335 5.1649874 10.0094811 10.2128468 10.3620087 9.6290952 4.5275583 9.0316282 12.2431591 10.7122488 10.5278354 9.4171268 0.00416320 0.64359000 0.64359000 0.00513590 0.00513590 0.00569190 0.01590400 -0.01563400 -0.00055444 0.02539000 0.02539000 0.02539000 -0.01464100 -0.00110870 -0.07267500 0.50290000 -0.75011000 0.00000000 0.00000000 -0.07254100 0.00083195 -0.00443120 0.61462000 0.61462000 0.61462000 -0.04319500 -0.04319500 -0.04319500 -0.00705320 -0.02382800 0.00416320 -0.00013862 0.00513590 0.01195800 0.00569190 0.01349200 0.01237600 -0.01563400 -0.00055444 -0.00055444 0.00332990 0.00332990 0.02539000 -0.00083160 -0.00083160 -0.00083160 -0.00083160 -0.00110870 -0.00110870 -0.07267500 -0.05590300 -0.74664000 -0.75733000 0.00000000 0.00000000 -0.00899060 -0.07254100 0.00083195 -0.00443120 -0.74133000 -0.74133000 0.61462000 0.01754400 -0.04319500 -0.04319500 0.00402430 -0.00443120 -0.02027500 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3182775 12.8465880 6.1820606 9.9002342 3.7422973 10.7566133 2.1877044 NA 8.1635551 7.4427354 NA 7.3719378 3.3576365 10.2324428 9.1184446 1.6471303 8.1360745 8.8539311 10.6233774 10.6491866 9.9271966 7.8548185 11.3102116 2.8315733 7.9308585 9.8689455 2.7112746 NA 10.6435481 1.1877044 11.9901225 11.8766131 8.2279971 10.3971606 10.0592274 9.1147444 3.9425990 2.3576365 0.5096452 4.8601335 8.8477032 9.6558221 9.5225392 4.6634414 9.3314092 6.5496507 9.7321886 7.3246981 10.0343728 -1.8124856 11.6532736 3.1877044 8.5896534 9.5465231 6.7886231 4.1184428 9.1599689 8.4914880 6.8097591 -0.8122323 13.4586594 -0.2273542 9.9926448 -0.8122323 8.3676161 5.5970991 7.5430581 7.4615024 13.8156459 4.3374542 8.7394154 13.8308305 10.3507278 10.5501989 13.4455001 13.1000820 8.3812323 11.1132616 12.9538219 9.9723420 9.2279968 8.9926450 0.7726458 7.4213268 11.4995973 11.1391740 7.0945982 9.0611514 9.2169944 9.2817849 10.3373717 6.8060933 7.5670853 11.3315686 6.6181594 NA 4.5452580 6.5274238 10.5856491 10.1516870 9.1206601 8.4320708 12.6772416 5.3775333 12.2546128 10.1114061 10.9373671 10.1524089 11.5001647 9.6491866 10.7331543 8.9088063 -0.8122323 8.6336840 4.6306501 12.2312472 8.2870548 10.7166496 10.5391986 7.5276459 13.3502558 10.2972114 9.6624272 13.5349825 10.1978855 9.9122210 0.7726458 TCGA-A2-A0YD 63 0 NA 769 breast stage iib t3 n0 (i+) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 5 2 2 3 3 1 1 4 3 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 6.242351e-07 10.58680789 10.12541102 12.00870267 9.91963207 8.27541591 9.52286985 10.23241541 10.11287668 10.20865881 9.08918377 11.28977869 10.62908554 -0.04945693 12.61100132 3.53544336 10.15790647 7.05552106 8.45563546 9.97516342 12.70342350 3.06596860 13.58469142 5.94295077 9.69588527 9.90128431 6.65092536 NA 12.25476920 7.89885287 2.27241144 7.65092536 8.54169603 NA 5.99488063 9.93774942 10.39929000 10.33382968 12.14544740 9.83719806 11.44250544 -0.63441943 11.03551518 15.06413262 8.73766953 9.47582339 11.64701831 10.44966691 4.66930462 3.72307795 9.55039819 12.16044638 NA 11.15097536 5.51527091 6.71866986 5.43161293 10.75757194 11.67868939 10.40066568 12.92053136 13.04351775 9.15587140 11.18530282 10.52795831 11.22680370 11.41605182 5.13370736 11.69853843 9.88072990 NA 10.60631424 9.01477901 3.37451093 5.94295077 10.99487950 10.55503866 10.09216686 9.79440644 3.17287150 10.15749966 14.18440785 12.26336836 9.99396838 9.70704174 0.93223000 1.55240000 0.86592000 0.00138680 0.00138680 0.00166420 0.00694350 -0.01254000 -0.00609040 -0.00180140 -0.00180140 -0.00180140 0.00180300 0.00180300 0.01740400 0.01740400 0.01740400 -0.00526100 -0.00526100 0.00305220 -0.00691950 0.00041593 0.00694350 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.45139000 0.00291330 -0.00290910 -0.00159390 0.00138680 0.00166420 0.00972760 -0.00340870 -0.00340870 -0.01009400 -0.00609040 -0.00609040 -0.00318590 -0.00318590 -0.00180140 -0.00297520 -0.00297520 -0.00297520 -0.00249380 0.00180300 0.00180300 0.00652620 0.01740400 0.01740400 0.01740400 -0.00526100 -0.00526100 -0.00526100 0.00000000 -0.00691950 0.00041593 -0.47279000 0.00694350 -0.00027724 0.00610900 0.00249690 0.00249690 0.45139000 0.00597000 -0.46621000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6964397 13.9646221 7.4922273 10.8399893 4.2235075 10.4970583 2.4529907 0.3654686 8.1534254 8.2992135 -0.6344194 8.7895633 4.5152709 10.0201589 9.5931388 1.9504684 10.0206064 9.8777696 11.3865028 9.3146199 9.6498728 7.7296574 11.8868780 4.7578393 8.1468828 9.9191522 5.3989454 NA 10.6610049 2.4529907 12.5627396 11.9241827 8.5304297 10.0511478 9.9907751 8.9967000 4.2481629 1.8249715 0.3654686 3.3655246 8.5366999 9.1145542 9.6323095 5.6784072 8.5442002 6.5991422 10.2697811 7.0968416 9.5559649 NA 10.8631252 4.2235075 4.5749734 9.3556482 5.2918798 4.0379444 9.4747007 8.7263701 5.9654357 NA 13.4241911 1.9504684 9.9880323 NA 8.7075976 5.2235036 7.6986783 8.3327491 13.594041 4.594340 8.096842 12.611001 10.484140 10.753540 12.703424 11.894343 9.291077 10.971697 14.116910 10.641647 9.550398 9.015677 NA 7.016574 11.967294 11.432789 6.889085 9.209444 8.863375 7.918192 10.221174 7.547917 8.138662 11.289779 6.998518 5.009379 8.427569 6.498409 11.734439 10.075468 8.431383 8.540449 12.473230 6.308037 12.674153 10.333830 10.282895 9.847322 11.160345 10.945310 10.727467 9.744901 NA 9.686182 5.494806 11.150975 8.547917 10.859878 10.757572 7.639318 13.400923 9.861378 10.496737 13.231304 10.667305 9.432957 2.365525 TCGA-A2-A0YE 48 0 NA 554 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 4 5 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 3.81477e-07 8.90890806 9.89457194 12.32996610 9.88154625 8.69945481 10.07322189 9.60341011 10.48624234 9.59693142 12.44363232 10.00768285 10.34928057 -0.07308969 12.47488441 1.51182222 13.79954017 5.62730625 8.57911263 8.69725395 4.95661429 NA 7.99295476 7.75341400 9.86593026 10.83200158 5.08337082 2.04232915 7.28734670 12.19988380 -1.65790044 9.21841963 8.59101624 3.42936155 4.60869098 9.56650752 10.44223659 9.99832767 9.02226238 10.11215368 11.21380802 0.92683442 5.97125844 15.16915865 7.51362970 9.64568347 11.28990494 11.69504964 4.88106256 NA 9.21303810 12.02138291 NA 7.83775785 4.55135605 5.11008757 6.90032343 7.98936100 12.15918627 9.50366457 12.47118581 13.92897707 8.64682436 10.67309968 10.09676522 11.58849498 10.53327054 5.37532447 11.83450712 6.43465992 1.14925937 10.34331099 9.26225555 3.04400935 3.34190038 7.63652385 9.39379135 10.27596221 9.18739290 2.14925937 7.66383061 12.87340610 12.72067179 11.23349667 11.18051583 -0.306390 0.365920 0.333680 -0.329940 0.578440 -0.335830 3.245600 0.154420 0.612990 0.106010 0.570060 0.088692 0.170310 -0.576430 0.343740 0.441050 1.365500 1.239600 -0.335370 -0.340440 -0.537030 0.974200 -0.129400 0.740050 -0.108540 0.052383 0.089272 0.089272 0.583630 -0.323330 -0.316810 0.468780 0.566320 -0.149010 -0.335830 -0.344230 -0.344230 0.154420 0.612990 0.544730 3.319200 0.110080 0.110850 -0.550460 -0.550460 -0.550460 -0.550460 -1.061300 -0.589020 0.371660 0.441050 -0.346560 -0.363630 0.431080 -0.335370 -0.335370 -0.340440 -0.537030 -0.368500 0.596740 -0.129400 -0.144380 -0.386800 -0.894190 0.089272 -0.335030 0.562680 -0.353270 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.610 0.610 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 0.000 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.610 0.610 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 0.000 7.21534661 12.99239363 4.80133458 9.50932095 1.66384555 13.21544303 -0.07308969 3.04234666 8.27854052 8.13143669 8.98846145 8.22578344 4.66382847 10.90676676 9.21149655 4.36427126 6.04234229 9.71476788 7.70822518 10.03800097 8.90753816 7.75341400 12.32987733 -0.37706965 8.12326268 10.35522543 2.14925937 NA 10.46343630 6.11668913 12.17142734 12.89918698 8.53296210 10.74011205 10.42870248 9.64397052 1.66384555 0.34187192 -1.65790044 -0.65812808 8.48401000 9.78588235 8.07999510 3.55135605 9.77909832 6.51182854 10.25740871 6.98936157 10.78484633 3.86546357 13.44830216 3.51182222 3.09678472 9.45236007 8.38491625 6.06982244 8.37944985 6.09009548 7.48656073 2.42937494 13.00662784 -1.65790044 10.52460753 -1.65790044 8.94552928 4.58982939 8.75447267 8.18425302 12.92541460 9.17953071 8.52801684 12.47488441 9.49164990 9.98305145 4.95661429 10.32097064 10.38616374 12.03091797 12.95787721 9.20763618 9.21303810 8.22301654 -0.07308969 7.82773203 10.83024510 10.930149 5.341904 7.921219 9.212268 9.101791 9.874488 4.817639 8.489108 10.007683 8.941816 6.035391 8.552574 9.529453 12.654644 8.835758 7.426711 8.816623 9.484648 6.049263 11.226192 9.998328 9.348930 11.109880 12.167060 10.743582 10.070249 8.973989 NA 9.016722 6.641111 7.837758 8.478894 9.955328 7.989361 7.881061 13.188275 9.378076 10.032337 13.365397 11.014328 8.379450 2.429375 TCGA-A2-A0YF 67 0 NA 1535 breast stage i t1b n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 5 5 2 3 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.121176e-07 11.19968406 10.43922480 11.42911320 9.79595506 8.86169674 9.82074875 9.48005079 9.70841143 8.83340784 14.43887967 11.19609448 10.78990609 4.11010428 12.71115766 3.44528970 8.03756013 7.13212747 8.48967940 10.40118331 13.56700840 1.89506991 13.67761855 5.08773438 9.79968847 11.02676154 6.83927687 -1.91212987 7.76545319 8.48326761 NA 7.22215925 6.67269547 NA 5.45405413 10.51058656 9.97837770 11.57217866 10.27322832 10.20082432 11.57758135 NA 12.12725222 13.23239162 8.28450766 8.72345139 12.25577865 11.43549312 3.44528970 4.70244146 9.32434551 12.39976543 1.08773438 11.23430204 3.48004534 6.17519523 4.37313312 10.96578428 11.66090714 10.05855827 12.10567268 13.06380518 7.54921248 11.33803180 10.94016925 11.71264302 10.56296016 3.37313312 11.76214635 8.36734398 0.08773438 9.89307426 9.14437120 2.61254123 5.71708963 10.97304840 10.60367956 9.90631551 10.13792216 1.67269688 11.08544212 11.94045793 11.47022229 9.61667583 9.43313869 0.00124810 0.61498000 -0.65687000 -0.00027724 -0.00027724 -0.01784600 0.00000000 -0.00366030 -0.00366030 0.01517100 0.01517100 0.00652620 0.01852300 0.02398700 0.00791750 2.89630000 -0.00719580 -0.70442000 0.01140000 -0.01133500 0.00638710 0.03580600 0.04471500 0.04471500 0.04471500 0.04443200 0.04443200 0.04443200 0.05409100 -0.60052000 0.00124810 -0.00622860 -0.00027724 0.05508800 -0.01784600 0.00000000 0.00000000 -0.00366030 -0.00366030 -0.00332430 0.00777830 0.00777830 0.03933700 0.01028500 -0.32774000 0.02216400 0.02216400 0.02398700 0.02398700 0.03467700 0.02412700 -0.74054000 -0.74054000 -0.73343000 0.01140000 0.01140000 -0.01133500 0.00638710 0.03580600 -0.71167000 0.04471500 0.04471500 -0.00589940 0.04443200 0.04443200 0.05409100 -0.01312700 -0.68497000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.016 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.016 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5348164 11.7216368 2.9457201 9.0842067 3.8383367 10.9130897 -1.9121299 -1.9121299 7.7724822 6.8723683 NA 7.2014751 1.6726969 10.5848367 9.2349383 NA 7.9047171 10.1045416 11.1239070 9.5538097 9.1802660 8.3949342 11.0249233 2.9457201 8.5624535 9.0989606 3.3731331 1.4096353 10.0520743 2.4800583 11.8323570 11.7191378 8.0065965 11.3026595 7.8071224 9.1059336 2.8950893 4.1962608 -0.9124014 7.9779977 7.8139517 7.3661832 11.0073416 3.3356548 6.9782105 6.6346281 10.7851354 5.4800518 9.7799130 -0.9124014 11.2807966 2.6112904 7.3237474 10.0055046 5.4710931 3.8950893 9.6853203 8.0607132 4.9332233 NA 13.5586146 0.8950699 9.4253552 NA 7.8190525 6.4971237 8.2849499 7.8224427 15.877721 4.657589 8.878896 12.711158 10.669875 9.949596 13.567008 12.701753 9.370243 10.220233 12.862932 10.754623 9.324346 8.110101 2.087734 7.736990 11.852916 10.383789 7.036101 9.613254 8.929298 9.457876 10.390983 5.958098 9.515570 11.196094 6.829200 2.611290 6.252641 7.064154 10.009574 10.878896 8.797679 7.067873 12.151381 5.098963 11.103861 11.572179 11.177680 9.892671 12.012268 9.349241 10.921414 8.885395 NA 8.522518 4.920622 11.234302 9.239384 10.461305 10.965784 7.082087 13.422002 9.944159 9.867863 12.820537 9.449129 9.423124 1.895070 TCGA-A2-A0YG 63 0 NA 666 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino 6 3 1 1 1 6 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 9.79165163 10.68842963 12.08944995 10.14684382 8.12369258 9.86709368 10.42407494 11.12326843 9.89818537 15.31122537 10.27501683 11.47917346 -1.60779250 16.92917875 2.91594151 8.27195691 7.87013227 8.52036803 8.31718647 12.95640415 NA 12.86207917 1.85179900 8.61882192 11.69629721 8.44358262 0.97731656 10.73444849 11.55790893 0.71431147 9.00708363 6.80176526 0.39242734 4.29926664 9.81233392 10.61244972 9.35960001 11.56386335 10.08934136 12.27864192 -0.02268344 10.28643359 14.97818723 8.46339358 9.21175448 11.53687269 12.15942020 4.29926664 4.99228806 9.60182723 11.68383231 NA 10.55947824 4.60182723 5.49040647 4.78469242 10.91446481 11.90708783 10.25268483 11.84061917 12.85634508 8.39237367 10.82125731 10.05770965 11.37304892 10.93757958 5.18678973 12.47875883 10.27463475 -1.60779250 9.30451469 9.06921236 3.29203076 4.81864097 8.77607799 10.24568330 11.04095604 10.13678725 5.36965492 10.37928240 12.90338514 10.71852234 10.31644401 8.91200998 -0.41684000 2.66570000 -0.04386700 -0.01779700 1.16850000 -0.03176200 1.38090000 0.35056000 0.06380200 -0.00179530 -0.00179530 0.64580000 0.57684000 -0.54189000 -0.43222000 -0.02095500 -0.02095500 -0.00040981 0.36691000 0.00000000 -0.02164100 -0.00815640 1.12190000 3.65690000 3.65690000 -0.03285400 -0.10249000 0.20795000 0.82197000 -0.39974000 -0.41684000 0.38767000 -0.02520300 -0.02465500 -0.03408000 0.35758000 0.35758000 0.34991000 -0.01862200 0.02048900 0.63628000 0.63628000 -0.02807500 -0.41058000 -0.42155000 0.35725000 0.35725000 -0.54189000 -0.13690000 -0.42276000 -0.00511670 -0.02095500 -0.02095500 -0.00040981 0.35758000 0.35758000 0.01880900 -0.02026900 -0.00815640 -0.00040981 -0.41618000 -0.40561000 -0.26648000 -0.38391000 -0.13535000 0.82197000 0.56046000 -0.41794000 0.427 -0.137 -0.399 0.000 0.000 0.000 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.140 0.297 0.427 -0.137 -0.399 0.000 0.000 0.000 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.140 0.297 7.99228636 12.20835740 6.70978689 8.90708775 2.78469242 12.01442560 0.39242734 NA 8.93733821 6.77607766 NA 6.90621959 0.97731656 10.74331299 9.06568297 3.67777883 7.49040567 10.19489016 10.01030039 10.08498931 10.06765606 8.04521852 10.28529598 2.29927397 8.77499785 9.78469128 1.71431147 3.52165383 9.49106381 0.97731656 11.80361994 12.42183357 7.28415782 10.13215434 8.35815799 9.32532659 5.84358444 1.56227906 -0.60757266 4.25035527 8.80494348 8.17373359 11.59587471 2.64029700 9.56595107 6.31718647 9.91446481 6.39237410 9.56292487 NA 11.81351816 1.71431147 4.39237238 9.84344578 5.90854634 4.47983846 7.98483084 7.46115199 5.85180650 -0.02268344 13.15719355 -1.60779250 10.77148138 NA 7.88622943 3.85180900 8.62719132 7.53448109 12.475905 7.417513 8.450365 16.929179 9.773917 10.287192 12.956404 12.611542 9.515202 10.906841 13.944533 9.287949 9.601827 7.334888 2.977335 9.924730 12.329564 11.7073818 8.8558982 8.4354011 9.2849166 9.5152017 11.4132982 5.4798352 8.7846911 10.2750168 5.7052564 -1.6077925 8.0487985 8.8430593 9.8415224 9.7216095 7.6091196 7.8186384 10.7785057 5.4798352 11.9619161 9.3596000 9.4264849 9.7383333 11.3869040 9.8862293 11.2215019 9.8852284 10.6172798 9.7784519 5.3696549 10.5594782 6.7499257 11.4138744 10.9144648 7.4718589 12.6118343 10.1655130 10.4530698 12.1421385 10.3011417 9.8353173 0.9773166 TCGA-A2-A0YH 53 0 NA 659 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 1 2 1 1 5 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.456549e-06 4.161568e-07 10.2277520 9.6502399 11.6191748 8.7481184 8.4533118 9.0402198 10.0176849 9.2648327 9.9654003 12.6502398 10.4645842 10.1085708 -0.4951254 12.7852803 3.5049381 9.1159693 2.8268637 8.7635105 9.1488007 12.4956689 0.8268434 13.3290579 6.4936297 9.4441490 11.2764340 7.3566932 2.4118330 12.3308533 10.6521494 1.9643617 9.1542007 7.3566932 NA 5.9143349 9.9705109 10.3330810 9.6147752 10.8453509 9.8509041 11.1062510 5.2598336 10.4426861 14.2254025 7.3893594 9.7174286 11.3249239 11.8847289 3.9312103 2.8268637 9.1923202 11.4818665 -0.4951254 11.2445142 6.6898205 7.2531374 6.0823726 10.9330429 11.6662339 10.0899070 11.2627511 12.4095791 8.8064407 10.5049445 10.0278643 10.7670393 10.8910764 5.1487999 11.6264780 10.0719498 0.8268434 10.3974873 10.6212884 1.6748674 7.3058447 10.9364421 10.0913152 10.2539758 11.4647654 4.9643755 8.6660763 12.4109895 11.3102853 10.5551332 9.1702804 -0.3227300 0.5786200 0.5786200 0.0448570 0.0342600 0.0225850 -0.1433500 0.0013868 0.0013868 3.6569000 3.6569000 2.1800000 -0.0085706 0.0000000 -0.0029091 -0.0029091 -0.0029091 0.1171200 0.1171200 -0.0212350 0.3004200 0.0133530 -0.2815600 0.0931850 0.0931850 0.3044100 0.3265600 0.3265600 0.3068100 -0.2864400 -0.3227300 -0.2675700 0.0448570 -0.2415600 -0.0066432 -0.1433500 -0.1433500 0.0013868 0.0013868 0.0013868 0.2577700 0.0059700 -0.6464000 0.2879100 0.2879100 -0.3207700 -0.2969100 0.0000000 0.0000000 -0.0029091 -0.0029091 -0.0029091 -0.0029091 0.1171200 0.1171200 0.1171200 -0.0212350 0.3004200 0.0133530 -0.6213100 -0.2815600 0.0931850 -0.3007200 -0.2682900 0.3265600 -0.3284300 -0.0977590 -0.2256400 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.643 0.628 -0.009 -0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.643 0.628 -0.009 -0.297 0.000 0.000 8.9185723 12.6501602 7.6186865 9.2166115 NA 10.8324971 1.3123167 NA 8.5588703 8.7961152 NA 8.1738115 3.0899049 10.2226209 9.2830217 2.5049508 7.9312091 9.2731289 8.1067152 10.1311098 8.9011638 7.5844289 10.0017983 3.9967955 8.2123038 9.8052970 2.0899049 -0.4951254 10.3613700 1.6748674 12.6462534 11.9821968 7.7457355 10.4996515 10.9540931 10.0285064 4.1773677 5.0127385 NA 5.9143349 8.3566936 8.9468513 10.6212884 3.7528770 7.8256546 6.6186865 9.9912768 6.5870934 9.4481919 -1.4949221 10.6981618 5.4474602 3.7903446 9.5175481 4.8362221 7.5411183 9.0917842 9.6212883 9.1011342 NA 12.9254311 1.0899049 9.9159257 NA 6.7670390 4.5049445 8.0974017 8.1738295 13.401298 6.781069 8.339415 12.785280 10.066232 10.558531 12.495669 11.694923 9.661660 11.064800 12.844029 11.179357 9.192320 8.535612 1.826884 7.623886 11.893365 10.555813 6.785715 8.476488 9.411083 8.935397 9.776197 7.654692 7.331493 10.464584 5.743348 1.674867 4.790345 7.578925 11.502830 10.120574 10.333874 8.912212 12.107063 7.546604 11.210944 9.614775 10.811861 10.101600 11.784555 9.629712 10.609871 9.224333 1.964362 9.350615 8.358254 11.244514 9.011748 9.884323 10.933043 7.829125 12.738065 10.231163 10.704617 12.403735 9.928586 9.310688 3.897260 TCGA-A2-A0YI 62 0 NA 1505 breast stage i t1c n0 (i+) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 2 4 3 2 1 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.387189e-07 10.4544029 10.2170133 11.1468499 10.1748423 8.5091459 9.7683382 9.3936687 10.2108565 9.4641798 14.0062627 10.6785461 10.8713552 2.1610170 12.5723776 3.7135529 9.1557384 6.8614480 8.7114983 9.6693308 13.1470395 -1.7456478 13.6714095 6.1549841 9.3353877 10.2961186 8.7155969 NA 9.4032294 11.0319890 4.1367574 8.4252940 7.8852943 1.2541102 5.6635069 10.2576352 10.7749815 11.0424278 11.4664617 10.3039659 11.7699403 0.5760867 11.2104935 14.3828971 8.7301648 9.6006089 11.6168831 11.4259196 5.3093981 2.2541102 10.0921394 11.9423676 0.2541102 10.9194532 4.8979713 8.0206461 4.6291584 10.6171569 11.6337664 10.1186904 12.3873398 13.0087439 7.7638922 10.5194393 10.4624827 11.5426950 10.6091931 4.9265403 11.7624073 10.5412525 -0.7458898 10.1074269 9.1980973 3.4340277 7.4114644 10.6730240 9.7464713 10.2604434 10.2068586 2.8390727 9.6824774 13.1293387 12.4026733 9.8433004 8.9096480 0.41373000 0.41373000 0.40861000 -0.00013862 -0.00013862 0.00402430 0.00000000 -0.00083160 0.00097064 0.00278820 0.00278820 0.00278820 0.00069327 0.00069327 0.64983000 0.46776000 -0.41696000 -0.00586190 -0.00263220 -0.42963000 0.00055459 0.00208050 -0.00995650 -0.00995650 -0.00995650 -0.01119800 -0.01119800 -0.01766600 0.00319100 -0.45297000 0.41373000 0.00319100 -0.00013862 0.00402430 0.00402430 0.00000000 0.00000000 -0.00083160 0.00097064 0.00097064 -0.00055444 -0.00055444 0.01419000 0.00277450 0.00277450 -0.00415460 0.42016000 -0.00093836 -0.00093836 0.00694350 0.01223700 -0.41696000 -0.41696000 -0.00586190 -0.00263220 -0.00027724 -0.42963000 0.00055459 -0.00208170 -0.00097017 -0.00995650 -0.00995650 -0.32994000 -0.01119800 -0.02098800 0.00319100 0.00694350 -0.00512270 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.8948141 12.5837034 6.0223012 10.0786783 4.4022378 10.6351194 2.8979761 NA 8.2155670 7.8048641 -0.7458898 7.6815561 1.9545686 9.7708023 9.2024846 1.2541102 9.5279129 9.2902910 9.9471686 8.8163597 9.6823257 8.5103259 10.4259196 5.5209031 9.7648815 9.9997916 3.8688250 2.2541102 10.0014711 3.7135529 12.4729076 11.5032308 8.3255798 10.0448730 9.4006861 8.8825630 5.0996066 1.4240621 0.8390727 0.5760867 7.9922093 8.5406752 10.2028495 5.0090067 7.3344548 6.4829354 10.5035271 5.6549968 9.4984811 NA 11.7596808 3.6464392 5.2653431 9.6859962 5.0433270 7.4439423 9.4895333 8.8798261 8.5533252 NA 13.7216910 1.0614997 10.4892340 NA 8.3026042 6.0614716 7.9666445 8.8324901 12.6942727 3.5760504 8.6980969 12.5723776 10.1911233 10.8353179 13.1470395 12.5784385 8.8669858 11.1165609 13.2455063 10.1113208 10.0921394 8.7698170 -0.7458898 7.2957763 11.5200253 11.485038 6.684571 9.452562 8.671970 7.416509 10.853247 8.337596 9.367208 10.678546 6.919453 1.576038 5.341580 6.243086 10.498481 10.931176 7.441469 7.301241 13.253236 8.549886 11.734155 11.042428 10.824922 9.661916 11.205038 9.899776 11.134849 9.023129 NA 9.055834 8.459911 10.919453 6.717642 11.246096 10.617157 7.744025 14.131569 9.685093 9.965784 13.260443 9.949781 10.080269 3.298512 TCGA-A2-A0YJ 39 0 NA 566 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 4 4 4 5 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.560588e-06 2.080784e-07 10.4916411 9.3907655 11.1303517 10.8388654 8.6124082 7.5130864 9.1721569 10.7158378 12.2699959 13.7221492 10.4981489 10.5870672 -1.2976084 15.5366775 2.9504498 11.8023560 5.3172245 8.3481735 6.8873900 3.6094004 -1.2976084 5.2103109 10.1161430 9.3549746 10.9207756 3.7469039 2.8724348 7.4304358 10.5005818 -0.2974311 10.7753176 7.8420662 NA 3.4029541 8.5290635 10.6420943 10.2142678 9.5667012 10.8538488 11.6363901 8.8535316 10.6369431 15.1397470 7.0831059 9.5636020 12.0038684 11.2638030 1.2874723 NA 9.2571040 11.4081475 -1.2976084 10.3144620 3.0244438 5.2416724 4.6094063 11.2370611 11.1888473 8.4540591 12.1532109 12.3342605 7.6183943 11.8084236 11.2231780 10.6822976 10.7465676 4.6567137 11.5933493 9.4822344 3.0948272 9.8768167 10.5487890 3.1691393 2.2874723 9.6213783 9.9873392 10.3784721 10.7144411 2.7899796 7.7137425 12.4574026 12.9438280 9.3373262 9.0356704 -0.31213000 0.59476000 0.59476000 -0.00152430 -0.00152430 -0.22625000 0.00041593 0.32334000 0.29047000 -0.64283000 2.20820000 1.51350000 0.79820000 3.65690000 -0.21528000 0.28200000 0.28200000 0.42805000 -0.00010264 0.27379000 -0.30944000 -0.20970000 0.20932000 3.65690000 -0.29638000 0.22978000 -0.31949000 -0.60071000 0.37693000 -0.28346000 -0.31213000 -0.14605000 -0.00152430 -0.32100000 -0.23374000 -0.62325000 -0.62379000 0.32334000 0.29580000 -0.33918000 0.99800000 0.29915000 -0.64283000 -0.00304750 -0.00304750 0.88406000 -0.00443120 -0.32623000 -0.61961000 -0.29801000 0.28200000 0.28200000 0.28200000 0.00402430 0.00000000 0.00000000 0.58847000 -0.30944000 -0.20970000 -0.02562000 0.20932000 -0.27512000 0.59458000 -0.17234000 -0.56406000 0.37693000 3.65690000 -0.09894500 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.601 -0.601 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 0.113 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.601 -0.601 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 0.113 5.8317987 13.2700553 2.4029677 7.9646100 3.0579527 14.1025606 -1.2976084 3.2874723 8.5713378 6.7632110 9.4295846 8.7819999 1.0244615 10.4046877 8.8395062 0.7024802 2.1619522 11.7112938 7.0423653 8.6926190 8.7342026 6.6508823 11.2841865 -0.2974311 10.0829761 9.9040264 1.8724348 NA 10.0644589 1.0244615 12.7910549 12.4476642 8.2299921 10.0639106 5.0600690 10.0942957 -0.2974311 2.0244261 -0.2974311 NA 8.6139069 8.9119684 4.4838738 4.0948357 8.7856221 6.7739779 10.2113003 6.7899783 9.5034149 6.2723704 13.6148899 4.1287800 2.0244261 9.9691963 7.7523639 3.7469039 7.0775549 5.8110394 4.6094063 11.5721089 13.4851038 -0.2974311 10.8143028 -1.2976084 9.4657274 3.6567137 8.1392265 8.9228933 10.563990 6.457402 8.296840 15.536677 9.771293 11.026696 3.609400 10.735250 9.427029 11.483055 13.200741 12.630663 9.257104 7.844622 3.226077 7.867422 12.253021 10.922893 5.457404 8.695453 8.894808 8.686934 10.389059 4.060065 5.389016 10.498149 4.430432 -1.297608 8.607902 8.642961 13.780874 9.622123 8.452385 8.425323 8.340951 3.872445 11.541085 10.214268 9.800547 10.627328 11.604890 13.409766 10.630293 10.065007 NA 9.917836 4.024444 10.314462 4.702513 10.334242 11.237061 7.877441 13.274623 9.776657 10.677288 12.226077 10.909835 9.593539 1.024462 TCGA-A2-A0YK 61 0 NA 588 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 2 4 2 4 3 3 2 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4.543045e-06 1.838026e-06 10.7773678 10.3728815 11.9507527 10.3803292 8.0485937 9.6876394 10.4873003 10.0061509 10.0850333 11.8382673 11.1781577 10.5845106 2.4378136 12.0751641 4.4135670 9.8111149 6.3701277 9.6190498 10.2920598 12.4380026 1.3382818 12.8173375 7.6183870 9.1061135 10.4336761 5.7883125 -1.4691302 9.8494669 8.6315863 4.9903559 8.7476700 7.9924036 0.8528778 5.6806704 10.3350552 10.4043682 9.6653505 11.8846223 10.1502271 11.6401018 6.5024675 10.2507408 14.7348265 8.5292607 10.3826614 11.5379514 11.2440958 5.7788525 5.8347036 9.5539854 12.8071213 0.8528778 11.4198576 6.2313633 7.9780074 4.6183855 10.8108249 11.9138183 10.0797461 12.0692344 12.9508185 7.0227773 10.7296761 10.7333480 11.4699523 11.7553781 5.1891366 11.6422229 11.1995876 1.1158989 10.1570895 9.0826323 4.3125490 6.3511035 10.7491846 10.1377919 10.1493097 10.0222763 4.3122803 9.5670978 13.2485470 12.9835515 10.1092968 9.7818147 0.14221000 0.14221000 0.14221000 0.00000000 0.00000000 -0.00277070 0.00055459 -0.00069303 -0.00069303 2.20700000 -0.00332430 -0.00567570 0.00499690 0.00499690 -0.00610030 1.31910000 -0.31389000 0.00277450 0.00277450 -0.00027724 0.00722170 0.00708260 -0.29886000 -0.29886000 -0.30659000 0.00249300 0.00249300 0.01427600 0.02146300 0.14221000 0.14221000 -0.00318590 0.00000000 -0.00277070 -0.00277070 0.00055459 0.00055459 -0.00069303 -0.00069303 -0.00069303 0.00208050 0.00048091 -0.31914000 -0.06742300 -0.06742300 -0.06742300 0.01014600 0.00499690 0.00499690 0.01433000 -0.00610030 -0.31389000 -0.31389000 0.00277450 0.00277450 0.00277450 -0.00027724 0.00722170 0.00708260 -0.30122000 -0.29886000 -0.29886000 -0.31307000 0.00374650 0.01427600 0.02146300 0.00374650 0.02511000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 11.0064043 12.2166585 3.1747739 10.2369885 7.2398353 10.9859945 6.5365487 2.8528578 8.4332992 9.7293692 -1.4691302 8.8690478 4.5082068 9.5024677 9.3904590 0.8528778 10.9116558 9.8906738 10.4150946 8.8573537 9.5907283 8.5238626 11.9127374 4.4378136 8.9498308 10.3939489 5.6704750 NA 10.4181447 4.0227761 12.9941292 11.9396519 9.3015881 10.5543319 9.2139188 8.8785454 5.9403148 0.8528778 NA -0.4691302 8.1855603 8.4660891 10.3052995 6.5588309 8.4301903 6.1382554 9.8950588 6.0623052 9.4348061 2.7788604 12.1370980 5.7693301 5.4497858 9.3850602 5.5017767 7.8774381 9.8757748 9.7723114 8.2908123 1.1158989 13.8405426 2.3382818 10.2265874 NA 8.0797461 6.8392630 7.8906735 8.5463393 13.183719 5.022776 8.575318 12.075164 10.571214 10.318419 12.438003 12.170604 8.851725 11.076371 13.170830 11.042924 9.553985 7.192702 1.115899 7.185560 11.245814 11.134087 5.948776 9.181078 9.324527 7.623681 10.498064 8.814013 8.876329 11.178158 5.496708 1.700839 7.347907 7.123194 11.903245 11.312284 8.313922 7.899431 12.045885 9.074923 11.316483 9.665350 10.670156 9.456479 11.594656 10.682575 10.758540 8.933936 2.231371 9.358283 9.281631 11.419858 6.634211 11.215015 10.810825 7.754926 14.227266 10.060355 10.540753 12.644178 10.533739 9.967115 4.720749 TCGA-A2-A0YL 48 0 NA 1474 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino 2 2 2 3 2 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.733986e-07 10.65054172 10.47203808 11.95523204 9.97005281 8.30455120 9.33921223 10.57226764 9.78443397 10.46975861 11.71258306 11.12438093 10.64593434 2.05807401 12.12510530 4.46617029 9.49655662 7.62910813 9.24410358 9.48692791 12.52600372 4.33492576 13.45592387 7.07532190 9.11502674 10.83616187 3.56709514 -0.05739166 11.12810242 8.98882213 3.71520150 8.46355339 8.26152705 2.44511751 5.39106654 10.17182693 10.31619768 9.70913638 12.37218860 10.59425723 12.01295211 7.07874431 11.61988670 14.85903126 8.29554855 9.75477412 11.03404290 10.93483779 5.53755389 1.81709110 9.49014470 12.54197799 -1.64250430 11.59575115 5.61503368 5.85749089 5.31184094 10.36326954 12.14013138 10.21368143 12.80110661 13.08205227 7.92939749 10.87875461 10.75570455 11.50770957 11.87445303 5.36887309 12.41207974 11.73241282 1.16497931 10.12417393 9.18101233 4.14162897 6.11919638 10.80730952 10.05765117 10.29022890 9.86939767 5.07189135 9.61797650 13.39033648 13.25582121 9.99788993 9.87777262 0.00221930 0.31520000 0.31835000 -0.00318590 -0.03163200 0.00110930 -0.00248630 0.00138680 -0.00152430 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00541390 0.00305220 0.00305220 -0.33248000 0.00332990 0.00972760 -0.32333000 -0.32333000 0.77502000 0.00305220 0.00305220 0.00305220 0.00460500 0.00221930 0.00221930 -0.00041585 -0.31681000 0.00110930 -0.00195720 0.00000000 0.00000000 0.00138680 -0.00152430 -0.00152430 -0.00488750 0.00186010 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00541390 0.00541390 0.00305220 0.00305220 0.00305220 -0.33248000 0.00332990 -0.00661150 -0.32620000 -0.32333000 -0.32333000 -0.15157000 0.00305220 0.00305220 0.00917050 0.00110930 -0.00055444 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.42843681 13.37310360 9.12995964 10.18459062 3.83175566 10.76570935 2.26453643 1.35766460 8.60794351 9.28394098 -1.64250430 9.35312962 4.35764349 9.84146072 9.21873201 -0.05739166 9.59306090 9.87235907 10.98973140 9.20078093 9.47177782 8.15043528 10.75317913 3.35765053 9.47073594 10.24866920 4.60557137 -0.05739166 9.75103551 4.46617029 13.67939697 12.02386900 8.64189062 10.13119628 9.17782388 9.22492369 5.80885609 1.94260834 -0.05739166 3.21563201 8.33349306 8.20939390 10.33241805 5.73268436 7.56763443 6.25246297 9.71189441 6.66142611 9.91319281 NA 11.62164770 4.28838071 4.62443433 9.75031122 6.01821131 4.24029143 9.77285855 8.29281027 6.32918819 -1.64250430 14.21907120 2.60556545 10.05548133 NA 9.37793040 6.01585657 7.84548503 8.21873177 12.8109709 5.2645364 8.4984747 12.1251053 10.0795986 10.4888589 12.5260037 12.3277509 9.5990323 11.3254116 13.4304894 11.9687851 9.4901447 9.1083520 -0.6422791 8.5474695 11.4242388 11.33062478 7.74134900 9.12002710 9.60141406 8.24334157 10.32053737 6.60081833 6.43979432 11.12438093 5.94260834 4.94260834 8.03183737 6.60258010 12.91085429 10.54437826 7.79643682 7.89680404 13.11513918 5.76703501 11.78344180 9.70913638 10.43278981 9.86593505 11.57014137 10.62326003 10.94893354 9.69582422 -0.05739166 9.05564632 6.90839142 11.59575115 7.61738812 11.07731191 10.36326954 7.47398899 14.58149588 10.08130594 10.47658603 12.55632025 10.78259859 9.93176548 2.52757084 TCGA-A2-A0YM 67 0 NA 965 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.595268e-06 5.895554e-07 11.5583982 9.6151660 11.8755569 10.1086193 8.2107439 8.7191372 9.8801855 10.2013920 12.0652591 12.9112939 11.5624778 10.3758806 2.9912089 12.0024440 4.4457797 10.3546214 6.3077910 9.0485065 10.4149940 5.5401110 -1.7636605 8.5389680 10.2075136 9.2991782 11.1322831 6.3448533 0.2363395 9.7923563 12.0334841 -1.7636605 10.9746326 7.6771981 -1.7636605 3.3237880 8.5298010 11.5652846 9.6998537 9.9131678 9.7156043 10.7882778 1.2363395 9.2384410 15.6625285 10.0875160 9.0525129 11.9708272 11.6112328 3.0436770 -1.7636605 10.0829950 9.2745624 NA 10.6334691 5.2136078 7.2697523 7.1281129 8.5275001 12.1846965 9.4298547 10.9930940 13.0698618 7.2164684 10.7284328 10.3932624 11.9231580 11.6519390 5.4340377 12.4546654 8.1876139 -0.7636605 9.4925380 10.6425343 4.3492379 5.7520287 10.7569479 11.0040999 10.8786066 10.4276970 -0.1786980 2.8801761 13.2254132 11.0786795 10.3832161 9.6135398 1.30880000 1.04220000 0.35512000 0.01754400 0.57905000 0.05128600 0.37792000 0.82645000 -0.05482500 -0.02452400 1.10150000 1.08010000 0.38982000 -0.00055444 -0.07427700 -0.01409000 -0.01409000 1.04150000 -0.04183800 0.73492000 -0.42298000 -0.39408000 1.36780000 0.36657000 0.73303000 -0.00816240 1.42590000 -0.43148000 0.00013863 0.01474900 -0.03040400 0.39297000 0.01754400 0.05128600 0.27498000 -0.43279000 -0.43550000 0.90593000 0.72716000 -0.03422300 -0.02728700 -0.41388000 -0.41805000 0.36628000 0.37002000 0.00485790 0.38899000 -0.02375700 -0.01349400 -0.44070000 -0.01409000 -0.41509000 -0.41509000 1.04150000 -0.42953000 -0.03040400 -0.41542000 -0.01161100 -0.38884000 -0.40030000 -0.01119800 -0.01243800 -0.46121000 -0.00816240 -0.39697000 0.02777800 3.65690000 -0.00484610 0.390 0.000 0.000 0.000 1.042 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.360 0.360 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.074 0.365 0.390 0.000 0.000 0.000 1.042 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.360 0.360 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.074 0.365 7.5446685 13.2683750 4.0943121 9.4597277 3.2807188 11.5956670 1.0436945 7.1641074 8.3237920 8.2820890 4.3448569 9.2613649 1.2363395 10.7591559 9.0810349 2.2363395 6.2021140 9.8528781 6.8620385 8.5905784 9.3919002 6.4699495 10.8154094 3.0943036 8.6688712 9.7779098 0.5582676 NA 10.0822113 2.6286570 12.3275167 12.4230625 7.0307455 9.0644658 12.0610891 9.5683658 5.1905240 2.1432301 -0.7636605 3.5938796 8.2983756 8.2738762 6.9744215 7.0242321 8.8773875 6.7480815 10.1273534 4.8362423 9.8579233 1.5582676 12.3201409 4.5582554 4.3237952 8.7487933 7.3292187 4.1670688 9.5789595 8.6026514 5.5492133 8.0927545 13.5354657 2.4842671 10.0485065 -0.7636605 8.7161095 1.2363395 8.0628778 6.9912168 10.986199 11.123359 7.972731 12.002444 10.075533 10.616790 5.540111 11.015433 8.617872 11.601259 13.785603 12.737047 10.082995 7.170020 3.851039 8.923705 11.191616 11.8726140 5.2136078 9.7822590 10.0368247 8.3158139 11.6142541 7.2078724 6.4457830 11.5624778 11.0672405 1.2363395 10.1905256 9.2569689 13.5718243 11.0515123 8.6307920 7.8510394 9.5722779 6.4310864 9.1822193 9.6998537 10.0731686 10.1577982 12.4246090 12.7301222 11.3836932 9.4137487 -0.7636605 8.9568727 5.2250127 10.6334691 7.1788441 11.4878117 8.5275001 8.0655131 13.7342434 10.0221904 9.5401100 12.7296218 12.4019429 9.9987113 0.8213020 TCGA-A2-A0YT 56 1 723 NA breast stage iiib t4b n2a m0 female 2008 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 1 1 1 2 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.352509e-06 2.774378e-07 10.1748721 10.7257751 11.5449961 10.3442735 8.9997202 8.8801198 10.6381543 9.8747421 10.0856621 15.2962667 11.5180511 11.2161826 -0.3056101 12.5965424 5.9982000 8.1387433 3.3948571 8.4559699 9.1748723 12.3797514 0.4313555 13.0513290 1.4314090 9.3227608 11.6829849 8.0327836 1.9168206 8.0073015 11.4248887 0.6943899 8.6755100 6.4714005 NA 4.6640447 10.3963025 10.4650824 9.7474393 10.2636413 9.7636444 10.9970574 8.4768709 10.8605816 14.7318082 8.6089334 10.2598316 11.4648071 11.2978903 2.6944122 3.5357171 9.9859730 10.0490352 -0.8905726 10.8852720 6.9360042 5.2793821 3.6944234 10.6174983 11.4217718 10.0413016 9.7937663 12.7238783 8.1009776 10.3826689 9.5484869 11.0061669 11.4155177 4.9674361 11.9157035 9.5060608 -1.8905726 10.2393830 9.2264498 3.0650552 5.2490091 10.8460694 9.1435671 10.8566001 10.1896074 2.4313823 4.4844926 11.1778984 10.9886564 10.1404680 8.2438823 -0.3080300 0.5574400 0.5574400 0.4307500 0.4263800 0.3362600 0.6688200 0.1095000 -0.2831100 2.1814000 2.2542000 2.5062000 0.0000000 0.0000000 -0.5208200 2.9492000 -0.5285900 0.0213230 1.0797000 -0.6674400 -0.2613100 0.0666270 -0.2716400 -0.2716400 0.5318600 -0.2414300 -0.2414300 -0.2415600 0.7198700 0.0297470 -0.3080300 -0.2614300 -0.6130700 0.3346400 0.3209300 0.0324220 0.0427320 0.1095000 -0.2831100 -0.2831100 -0.2660000 -0.2822700 -0.6487400 -0.2760700 -0.2760700 -0.2760700 -0.2760700 0.0000000 0.0000000 -0.5208200 -0.4967300 -0.5289000 1.4046000 0.0037465 -0.2907100 -0.2907100 -0.3011000 -0.2405800 0.0627940 0.1316900 -0.2716400 -0.2716400 -0.6199700 -0.2414300 -0.2414300 0.0806010 -0.6286500 -0.2591400 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.100 0.372 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.100 0.372 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 0.000 7.4692055 11.6111688 5.9486592 9.0730747 3.4313823 10.8799135 0.9167823 -0.8905726 7.9280380 6.0519702 NA 8.4406529 0.1094274 10.8887650 9.1882741 3.2387410 8.2257998 9.6157637 6.4537513 10.7156298 10.3662220 7.5230836 10.3544145 2.6944122 8.3298345 9.3508433 5.1755446 0.4313555 10.6626053 1.5689077 11.8089200 12.5433022 7.3091280 9.7968317 10.0913800 9.3042128 4.2387410 1.4314090 NA 4.4132353 7.8825954 8.1741987 10.5598940 3.6013043 8.6119101 7.7019129 10.2101184 6.5399079 10.4650824 NA 10.4375699 3.5017703 3.6944234 8.9515470 5.0929051 2.5688834 8.5294161 8.1470029 9.9557300 2.4313823 14.0971197 0.6943899 11.2092969 NA 8.0193489 5.0636539 8.3430755 9.0178487 13.5848678 6.5892362 9.1975816 12.5965424 9.2881209 10.9711246 12.3797514 10.2699578 8.2451652 10.7156298 13.0629250 10.3478607 9.9859730 8.1955922 0.9167823 7.8643434 13.3023653 10.8388643 6.2743623 8.7497009 8.6897146 9.1699290 10.3315325 5.3189097 10.0716290 11.5180511 7.6388869 2.5688834 2.9674453 9.3352117 9.6162595 10.1952604 8.9798207 8.5760425 12.5241413 3.7533157 10.8507397 9.7474393 9.9296349 9.0931621 12.9720450 9.9087377 10.6551446 9.3514393 6.8973590 8.6521882 4.2992813 10.8852720 4.6486150 10.0324121 10.6174983 7.9863717 12.5778255 10.9332213 10.0170978 11.9882733 9.9829002 9.2140548 0.1094274 TCGA-A2-A1FV 74 0 NA 714 breast stage iib t3 n0 (i+) m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 5 1 NA NA 1 4 3 1 3 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 1.733986e-07 11.6723328 10.8804329 12.2274826 10.0407505 8.4486842 6.6803820 10.6777040 9.0838683 9.1625945 9.7047902 10.9010151 10.5596108 1.4537019 12.4515874 5.2837773 7.1816224 8.1495104 8.6835891 7.4130600 13.4277982 3.9562054 14.7171182 3.3712382 8.4078987 10.9575280 9.8984871 -1.7164338 5.9702785 5.7267195 2.6760868 8.2894020 6.4736019 -0.1313132 5.1039550 10.4499404 11.2054323 10.0634966 12.5133472 10.7718685 12.8140007 4.6760925 10.9119949 14.1071943 9.4014594 10.7058420 11.5771052 11.9677588 4.9842156 5.9772639 9.8989472 10.2581918 NA 11.2640954 11.0119104 3.9842156 2.2837736 10.0527886 12.4458539 9.9455553 11.4075754 13.6929361 7.1071449 11.9093720 11.5992538 12.4725206 11.8994069 5.0651371 12.6035905 13.5819473 1.8687263 9.4593269 9.7324098 3.6107473 3.8073343 9.6787758 9.8209957 10.2703305 10.8041504 4.4932310 8.9103990 11.9098285 11.1814337 10.5122953 9.1831341 -0.0033243 0.8031500 -0.0044312 -0.0276710 -0.0351760 0.0416000 0.0000000 0.0151680 -0.8742400 3.6569000 1.4293000 1.5993000 -0.0037232 -0.0078863 0.0106490 -0.0065961 -0.0065961 -0.0136770 -0.0136770 -0.8978200 0.0108420 -0.0378980 0.7997500 0.0329860 0.0329860 -0.0084385 -0.0084385 -0.0084385 -0.0027707 -0.0033243 0.8031500 0.8327400 -0.0276710 0.0416000 -0.8406600 0.0000000 0.0011093 0.0151680 -0.8754100 0.0054139 1.2768000 1.2777000 0.0052749 0.7364400 0.7364400 0.7364400 0.7364400 -0.0078863 0.0242680 0.0339720 -0.0065961 -0.8668800 -0.8909000 -0.0136770 -0.0136770 -0.0136770 -0.8309800 -0.8621600 -0.0378980 -0.8930400 -0.8667200 0.0329860 0.7964600 -0.0031859 -0.0084385 -0.0027707 -0.8359200 0.8188400 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.246 1.246 0.000 1.574 0.736 0.736 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.246 1.246 0.000 1.574 0.736 0.736 0.000 0.000 8.0453283 10.8656839 9.4007710 8.7595107 2.9680354 10.2953540 0.6056840 0.8687658 8.7595107 8.9570864 -1.7164338 8.8821836 3.1417597 10.6371999 9.1944200 1.4537019 9.6006245 10.1838893 9.5059685 8.0911323 9.3701126 8.3512118 11.0490634 1.6829328 8.7544363 9.6577300 2.8073343 -1.7164338 9.6275182 4.9419889 12.1610614 11.4268416 10.6211204 10.1766995 6.8229366 8.8287417 8.8200245 1.0911243 -0.7161967 5.2724637 7.4980961 6.0781935 10.7409016 6.4537019 7.3808351 4.3498677 9.4574543 6.4486846 9.6208417 -0.7161967 9.6006245 4.1664182 6.1906682 10.6512111 4.7132284 1.9842248 8.4143478 8.1055513 3.1417597 NA 14.0059711 0.8687658 9.2085897 -1.7164338 7.6347167 7.6653203 8.6023199 6.2262927 12.5158204 4.1664182 9.0919370 12.4515874 9.2204153 9.9776998 13.4277982 13.9250106 9.7715169 11.1087360 13.1048038 12.3391445 9.8989472 6.9876813 -0.7161967 8.0911323 10.8860122 11.410320 9.207105 9.040334 10.383125 9.243779 11.058935 3.984216 5.522181 10.901015 5.605705 4.065133 4.927636 5.659077 10.981614 9.297100 8.221887 7.352556 12.456517 3.984216 13.989071 10.063497 9.866860 9.601755 12.602038 8.782626 11.077177 9.026929 1.605684 7.664995 3.676098 11.264095 5.522181 11.460106 10.052789 7.707944 15.274701 10.023558 10.200403 12.628073 9.922666 10.931461 3.328176 TCGA-A2-A1FW 62 0 NA 528 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 7.976338e-07 11.6348925 10.8837690 12.4010922 10.2636045 8.8055653 8.6221840 10.9829120 10.3326169 8.3172652 14.0775606 12.1813881 11.5416216 -0.7529232 11.5355779 4.9475820 7.3530533 6.2071471 9.1947812 9.0136733 13.7934058 5.2915373 14.7376349 1.8321204 9.2113914 12.3577908 8.2129287 2.2471376 8.5186075 10.5299432 7.9406313 9.3299586 6.6351623 0.2471984 4.6394637 10.9462830 10.2453822 10.2583717 9.8828625 10.3667340 12.0758759 7.4245636 11.0492568 13.6803386 11.0009649 10.5869916 12.2679507 12.3242104 4.5869929 6.8728534 10.2973331 10.8997654 -1.7529232 11.2846913 7.7167865 5.3024251 3.9195689 10.8860328 12.4964801 9.7529559 10.2531197 13.0420679 7.8636932 11.2235295 10.8105790 11.3527256 11.9302486 5.7147511 12.4475066 12.2775529 -1.7529232 10.0095265 9.8521609 2.7775986 5.6394608 11.0762725 9.9388880 10.4079612 10.8393678 3.5690779 9.0561085 11.4996620 10.6859362 10.2439709 9.2414977 -0.235330 1.738600 -0.193870 0.169260 0.166470 0.231790 0.179200 0.197860 -0.272620 -1.240100 -0.246670 1.927200 -0.278580 1.144200 1.013400 1.325100 -0.224530 0.407440 0.628250 -0.254310 0.212530 0.188590 -0.304510 -0.782690 3.656900 -0.311670 -0.311670 -0.311670 1.211400 -0.291770 -0.255510 -0.239600 0.089468 -0.239850 0.256680 0.621140 0.172570 0.197860 -0.272620 -0.272240 0.665120 -0.747770 -1.292900 -0.285010 -0.269850 -0.276070 0.132430 0.196190 -0.293670 1.013400 1.325100 -0.312700 -0.312700 0.407440 0.628250 0.595500 -0.254310 0.117410 0.195120 0.158610 -0.315990 -0.782690 -0.276670 -0.311670 -0.311670 3.656900 -0.816630 -0.298630 -0.264 -0.264 0.780 -0.233 0.628 0.628 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.257 -0.257 0.166 0.166 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 0.000 -0.264 -0.264 0.780 -0.233 0.628 0.628 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.257 -0.257 0.166 0.166 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 0.000 7.9318928 10.5400411 5.9613895 8.1704719 3.1540323 11.0585191 -1.7529232 -1.7529232 7.7608723 6.1955110 NA 7.6565350 1.2471376 10.4732555 9.1175091 3.4950683 9.1947812 8.8093868 7.4735564 11.5919950 9.6289037 8.5290744 9.3425414 2.1540323 9.3451766 9.4547689 1.5690536 -0.7529232 11.2322747 2.7707022 11.8680515 11.5665343 6.8358584 9.7444973 9.6817727 9.0520822 5.9613895 2.5690779 -1.7529232 0.2471984 7.8302274 8.0973311 11.3091905 5.0800351 6.8282698 7.9818538 10.4989227 5.6308481 10.3911653 -1.7529232 9.3873352 2.4170829 4.1051249 8.8215014 4.2069167 6.2414970 7.3790014 8.9044627 6.4220698 NA 13.7969291 1.4170559 10.7853333 NA 9.2035205 3.2915446 8.4711460 9.3186068 15.367483 5.166008 8.726925 11.535578 10.504019 10.034639 13.793406 14.651804 9.049661 11.774844 13.597393 11.130742 10.297333 4.988612 2.054501 9.271591 11.895277 11.6638100 10.2304944 8.5701992 10.6016693 8.3621880 11.1617949 5.4759636 11.0217256 12.1813881 4.6046941 -1.7529232 2.7065748 8.1343652 12.1373136 10.3135700 9.4873394 9.6581256 10.4455894 5.0153281 14.5363751 10.2583717 10.4690336 10.4953685 12.2094982 7.8855805 10.7588970 9.6096362 0.2471984 8.5998719 7.1984293 11.2846913 6.3712661 11.1903918 10.8860328 7.4687316 13.4374321 10.1708433 9.9881900 11.9553661 10.3186068 10.5463524 0.8321204 TCGA-A2-A1FX 61 0 NA 1847 breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 1 NA NA 1 1 3 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 10.017303 10.313442 11.258209 9.424212 8.625079 8.545757 9.867685 9.302038 10.283350 12.617515 9.552016 10.437796 1.815739 12.302424 3.022190 9.452926 6.075306 8.623099 7.921048 12.480055 1.700262 13.836377 2.574731 10.296012 11.322471 7.796543 NA 8.413367 9.558248 1.437228 8.719858 6.893382 NA 3.700262 9.860138 10.371808 10.164813 11.342469 9.062211 11.262668 1.285225 10.548890 14.913650 7.238003 9.731853 11.798738 11.148899 3.948199 3.400702 9.097585 12.684092 -1.884700 10.675876 6.932288 6.208061 4.922659 11.076392 11.747845 10.121981 10.848532 12.542093 8.265051 10.344424 9.866095 10.946414 10.992205 5.202766 11.156964 12.609160 NA 10.226440 9.605654 4.456754 6.016171 11.164472 9.966663 10.911344 10.429888 7.490344 5.707762 12.394842 10.574224 10.104344 8.963927 -0.3750400 0.7545200 -0.3805500 0.0065814 -0.0055730 0.0197830 0.2093200 1.1346000 -0.6991000 1.1154000 1.1154000 1.1154000 -0.2469100 -0.2469100 0.4939600 3.4080000 2.2196000 -0.0012473 0.0072217 -0.0368100 0.0241270 0.0000000 0.1448800 0.1448800 0.1448800 -0.0850590 -0.0850590 -0.0850590 0.4437600 -0.3750400 1.5093000 -0.2980400 0.0065814 0.0197830 0.0197830 0.2093200 0.2093200 1.1346000 -0.6991000 -0.7428800 -0.0369690 -0.0055018 -0.7135500 -0.6995600 -0.6987500 -0.6987500 -0.7675500 -0.2469100 -0.2469100 0.4679300 -1.2381000 -0.7024800 -0.7219000 -0.0012473 0.0072217 0.0072217 -0.0368100 0.0171810 0.0000000 -0.7796500 0.1448800 0.1448800 -0.5956500 -0.0850590 -0.0850590 0.4437600 0.0210430 -0.0125290 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 0.000 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 0.000 8.5215094 11.6222318 6.8398185 9.2329475 4.4190871 10.7505691 1.1152996 NA 8.8312664 9.7978601 -0.2997379 7.3604292 1.7002621 9.9825831 9.2355423 5.0695003 9.3045113 9.5772953 7.9258760 10.6329738 9.6009727 7.6011334 10.8639166 4.5910391 10.6834980 9.7939045 2.7591558 NA 11.1135422 3.2027625 13.3057078 11.8591921 7.7189308 9.4338473 9.4903439 9.3344729 5.8966642 2.3632272 0.4372277 5.7002677 9.7221723 8.6001274 10.5744798 3.1152996 7.4791327 7.5119092 10.4745049 5.3149756 10.2103717 NA 10.3750477 4.7735164 4.2650543 9.4902841 5.7519296 2.1152996 8.9048381 8.6476602 4.0925880 NA 13.5780303 1.9226546 10.1335046 0.1152996 8.5623874 6.0636712 8.0636717 9.7641114 15.114625 5.638867 8.871026 12.302424 10.064402 9.461264 12.480055 12.015700 10.528668 10.680168 12.704487 10.749435 9.097585 8.537369 1.922655 7.384432 11.753288 10.5062794 7.4903439 8.4247806 9.1223316 9.9374768 9.2158484 7.0251972 9.6437584 9.5520160 7.2133366 -0.2997379 3.4728516 7.8535828 10.9664678 8.8626581 10.3335650 9.3602629 11.5191153 4.8157445 10.0768300 10.1648127 10.3522155 9.5246953 10.9137762 9.9879794 9.8432248 8.5225721 NA 8.5598742 3.9481990 10.6758761 6.1096573 10.2257878 11.0763923 7.7152173 13.1308937 10.1376722 9.9330875 12.0695916 9.9572618 8.9918214 1.2852246 TCGA-A2-A1FZ 63 0 NA 683 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 3 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 10.267395 10.346086 12.267758 9.712624 8.009871 8.638175 10.764673 10.234082 10.155666 14.141468 10.170244 10.983286 1.534161 13.083991 4.311743 9.246419 7.356139 8.296638 9.403621 13.526267 2.048724 13.834939 6.030563 9.295119 11.000287 7.478326 NA 9.223636 10.361140 4.749148 7.300429 8.112645 NA 4.250348 10.251324 11.003779 11.229614 12.353746 10.493311 11.755897 1.311736 12.185445 15.292628 9.123730 9.531720 11.826130 11.616857 4.771178 4.218634 9.471616 11.478117 NA 11.096380 5.454702 6.075511 5.835308 10.793881 11.627083 10.264486 12.483339 13.077722 9.148847 11.201502 10.612242 11.702093 11.024272 5.370639 12.781472 11.238782 NA 10.337807 8.816895 3.214778 5.945952 10.815239 10.499097 9.753997 9.923999 2.427231 9.628404 13.811300 11.509371 10.149373 9.818218 3.8854e-03 8.3764e-01 8.3930e-01 8.5087e-01 8.3959e-01 -9.4046e-03 -7.3339e-03 -8.0771e-03 -8.0771e-03 3.6076e-03 3.6076e-03 -1.1575e-02 4.3682e-05 4.5800e-03 1.4297e-04 2.6357e-03 2.6357e-03 -3.3243e-03 -3.3243e-03 -4.7079e-03 0.0000e+00 5.9047e-03 2.1323e-02 3.8854e-03 3.8854e-03 1.6286e-02 1.6286e-02 1.6286e-02 1.0842e-02 3.8854e-03 3.8854e-03 1.3772e-02 -4.6142e-01 -9.4046e-03 -9.4046e-03 -7.3339e-03 -7.3339e-03 8.7528e-03 -8.0771e-03 -8.0771e-03 -4.7079e-03 -4.7079e-03 3.6076e-03 -2.2168e-03 -2.2168e-03 5.8309e-03 5.8309e-03 4.5800e-03 4.5800e-03 6.9435e-03 2.6357e-03 2.6357e-03 2.6357e-03 -3.3243e-03 -3.3243e-03 1.6705e-02 -4.7079e-03 0.0000e+00 8.0567e-03 1.9503e-02 2.1323e-02 3.8854e-03 -2.7707e-03 1.6705e-02 1.6286e-02 1.0842e-02 3.5579e-03 2.5250e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2659413 14.4189621 7.8891736 10.4542776 3.0927487 10.5537282 0.7267440 1.8966981 8.3173696 10.1142613 -1.2733431 9.0588192 5.2659432 9.9953245 9.2552366 1.5341612 8.9519899 9.6918452 11.9286001 10.0716332 9.9278651 7.5276826 11.2997196 3.7711778 7.2464185 10.0396655 4.7711778 NA 10.3602319 2.5341363 12.1835220 12.0992395 8.3211073 10.1324559 8.2065626 9.0430639 4.8142479 2.0487244 0.7267440 2.1862153 9.0610558 9.2678792 11.3234382 6.3117447 9.4757300 6.1530473 10.3547724 5.7711778 9.4758139 NA 12.5483572 2.0487244 4.3992053 9.6077742 4.7467051 3.1191071 8.6736889 8.4866705 5.4816703 -0.2731688 13.0022523 0.7267440 10.6549307 -1.2733431 8.2601122 4.6336753 7.8992101 9.0644043 13.0396194 5.6692961 8.3561390 13.0839909 10.3957118 10.6674632 13.5262665 12.2311050 9.3051552 11.0613351 13.4069772 9.9459510 9.4716163 9.1923490 0.3117356 7.2266280 10.9903452 11.194643 7.296638 9.024845 8.688232 8.483339 10.130285 7.066633 8.334113 10.170244 6.434141 3.311750 5.621601 7.405629 12.043064 9.980039 7.587870 8.009871 13.634894 5.218634 11.607831 11.229614 9.933797 9.673689 11.507732 10.211102 10.911348 9.672226 3.896708 9.419119 5.030561 11.096380 7.732407 10.870485 10.793881 7.423750 13.131591 10.107244 10.365671 13.130394 10.567167 9.765016 1.896698 TCGA-A2-A1G0 49 0 NA 616 breast stage iib t2 n1a m0 female 2010 NA yes other specify 2 white not hispanic or latino NA NA 5 3 NA NA 3 4 2 3 1 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 11.09606968 10.61686905 12.71331081 10.15943682 8.72028531 8.74702312 11.37333283 9.52361860 9.36436647 13.22495027 11.46022765 10.60838790 1.85439468 14.20331562 3.85441463 9.39357022 7.19588005 9.01244744 9.69132251 12.65898253 2.30188025 13.60523263 4.62379664 8.89424785 11.26976914 4.39498051 NA 11.55882606 7.36939407 4.03884000 8.28676335 7.95340028 -0.02004784 5.76130123 10.21076338 10.67835762 8.60321425 13.36153036 10.30412289 11.33253760 7.34042340 11.81520327 14.26134116 8.94732221 10.35461965 11.47179545 12.01920415 5.10922682 2.56491466 9.52297417 12.70608953 -1.60515664 10.98650217 5.87879644 6.90673309 4.88683300 10.47546432 12.11501028 10.90895413 13.88633192 13.15834785 7.53197090 11.05698053 10.77381654 11.16275051 12.07929017 5.64290658 11.81638727 12.28970291 -1.60515664 10.29282534 9.98743684 3.75604120 6.50872179 10.21276301 10.59096713 10.70984624 10.76157525 3.64290947 8.79051402 13.33377837 12.07621826 10.25529088 9.36004268 0.4768400 0.4768400 0.4584500 -0.0204120 -0.0204120 0.4424000 0.4653600 -0.0216470 -0.0216470 0.9569600 0.9569600 0.9314200 -0.0041546 -0.0117300 -0.0203090 -0.0143660 -0.0143660 -0.0129890 -0.0129890 -0.0260300 -0.0076101 0.0091705 -0.4940200 0.5077600 0.5077600 0.4429100 0.5129800 0.5129800 0.4959700 0.4768400 0.4768400 0.0000000 -0.0204120 0.4424000 0.4424000 0.4601500 0.4601500 -0.0216470 -0.0216470 -0.0283770 0.4629700 -0.5144500 0.9569600 -0.0099490 -0.0099490 -0.0099490 0.0116150 -0.0117300 -0.0033243 -0.0203090 -0.0143660 -0.0143660 0.4892300 -0.0129890 -0.0129890 -0.0129890 -0.0260300 -0.0076101 0.0091705 -0.5487100 -0.4940200 0.5077600 -0.0036011 -0.4682300 0.5129800 0.4959700 -0.0077482 0.4069400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 0.173 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 0.173 9.37440507 12.31263162 7.10233899 9.78192012 4.00968756 10.67806821 3.60443907 1.39495308 8.47845901 8.55862964 -0.60493720 8.24292970 2.39498051 9.73092843 9.68326923 1.71690312 9.53644850 9.96150960 12.27924577 11.94992838 10.40060090 8.92538620 10.52747955 4.56490247 8.71465182 9.48310554 4.06740639 NA 10.21276301 3.85441463 12.19587974 11.98299169 7.58727272 10.48707629 8.39497966 9.49629896 4.14986903 0.71694701 -0.02004784 6.49301160 9.16894333 8.66176634 9.52747955 5.74370884 7.84917613 4.52426431 9.55674150 6.00968980 9.88131207 NA 11.11693346 3.56490247 4.17633873 10.02382628 6.10206388 7.07446048 8.72925297 8.50872219 8.42840289 -0.60493720 13.55866883 0.71694701 10.01428275 -0.02004784 8.27149664 6.40620671 7.61414811 7.57737444 13.668302 3.918539 9.829087 14.203316 10.452633 9.978063 12.658983 12.952743 9.465101 11.149450 13.729288 11.604129 9.522974 8.584804 1.202324 7.947649 11.710978 10.818884 7.725897 9.059427 8.653546 8.735942 10.186570 7.337494 6.498268 11.460228 5.053190 4.325717 5.584803 6.036888 11.649566 10.320534 10.285624 8.126299 14.882773 8.004159 12.274586 8.603214 10.122475 9.868686 12.678068 9.927823 10.852104 9.242037 NA 8.682946 8.513921 10.986502 7.009690 10.877989 10.475464 7.623799 13.964682 10.441081 10.349903 13.338365 9.275329 10.099748 2.787307 TCGA-A2-A1G1 85 0 NA 584 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.548757e-07 3.121176e-07 10.3430522 10.2287195 11.0924219 10.8164337 8.0011396 9.2428621 9.0962310 10.9307601 10.3049989 14.4258737 10.3822092 10.4770819 2.7219194 17.4109290 2.9949417 8.7256682 7.2217621 8.3561222 6.4407346 6.0498420 -0.8630212 9.7129654 5.4130795 9.8494806 10.8565563 6.2084158 0.1369788 8.3267782 11.1029182 2.3848787 9.0034597 8.2164384 1.9442962 6.2244166 9.9289305 12.7253169 10.0907862 10.2134353 10.5577034 11.4863731 3.1369460 8.1662409 15.7260195 8.3945536 9.1048860 11.6360521 11.4910652 5.2968245 NA 9.8729326 11.1406472 NA 11.1816892 5.4856812 7.5271227 7.3801277 10.5754855 12.1051704 10.4266843 12.0495623 12.9159547 6.7143829 11.0689838 10.5095984 11.0176851 11.2087511 5.4856812 12.1332505 7.3872522 -0.2780587 10.5681900 10.1714086 2.4624712 6.4037398 9.0050044 10.9428990 10.2107605 10.4647869 3.2662318 4.5632192 13.3731921 11.9274039 10.0613950 8.6035399 0.0975420 0.0975420 0.4069400 -0.2265000 0.1290400 -0.2321400 0.1536700 0.0790150 0.5001200 0.4951000 0.4951000 3.0662000 0.3952900 -0.2690100 0.1300700 0.1300700 0.1300700 2.0626000 0.0051359 0.1104400 -0.2246500 -0.2366700 -0.2454500 3.6569000 -0.2446000 0.2288500 3.6569000 -0.2611900 0.2367400 -0.2466700 0.0975420 -0.2188500 -0.2265000 -0.2368000 -0.2301500 -0.2332500 -0.2332500 0.0790150 0.5001200 0.5001200 -0.2331200 -0.2182400 0.4302400 -0.2331200 -0.2331200 -0.2362300 -0.2362300 -0.2690100 -0.2690100 0.1300700 0.1300700 0.1300700 0.1300700 1.9938000 0.0051359 0.0051359 0.1283000 -0.2358200 -0.2409500 -0.0193140 -0.2454500 -0.2498200 -0.2354500 0.4111100 -0.2611900 0.2200600 -0.3745900 0.1439900 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.240 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.500 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 0.000 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.240 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.500 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 0.000 8.8708163 12.7470557 4.8093784 8.4130778 3.8648696 12.0629715 1.8373782 5.3366262 7.5484644 8.0911497 1.9442962 8.4725227 1.7218976 10.3121913 9.4577541 0.4589069 8.6614952 10.4815269 7.4361618 7.1027379 9.3874119 7.4723440 10.8212639 3.2244108 9.2237534 10.7735782 2.0438344 1.3069038 8.9972647 4.3068819 13.1727407 12.3699740 8.1551537 10.9340071 9.5757455 9.1586276 3.1813411 3.1813411 0.7219413 NA 7.2376163 7.4945052 7.8129108 2.9949417 8.0389519 4.7951643 9.9999783 5.2030445 9.1745005 2.9949417 13.1975651 3.8093836 5.4768029 9.8305669 7.7976090 7.9964882 8.8181920 8.7461324 7.4315745 10.2047241 14.1868234 -0.8630212 10.1837366 NA 11.2384369 4.8511993 8.4656284 8.2297110 12.810106 10.750513 8.174501 17.410929 10.507167 11.172955 6.049842 9.096231 9.544221 12.455779 13.261196 11.272983 9.872933 9.394341 2.306875 7.998040 10.499445 10.432149 4.751662 9.446998 8.784412 9.398461 8.880585 6.608629 5.114234 10.382209 9.639288 2.944315 9.544221 8.913724 13.062554 11.785648 8.382506 7.368175 10.412205 8.464506 11.540872 10.090786 10.128475 9.882628 12.868591 9.768131 10.634057 10.314996 -1.863021 9.140675 8.345188 11.181689 8.109934 10.027598 10.575486 7.790300 14.723911 10.307505 10.815554 13.381355 11.117807 9.349450 2.837398 TCGA-A2-A1G4 71 0 NA 595 breast stage iiia t3 n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 1 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 3.467973e-07 10.6946016 9.7782561 12.3906484 10.4593080 8.2253550 8.8286960 10.7276220 10.4909742 8.1632647 13.0599590 12.3380091 11.1880496 -0.2824387 11.8504883 3.1769929 9.3420511 7.0514613 8.8182227 10.1311882 13.3692473 1.5920144 14.1228125 0.4544918 8.8444883 11.8149340 7.4386596 -1.8672258 10.0198184 9.7605874 0.7175613 8.5356098 7.8468430 NA 5.3710012 10.3441818 11.1164820 9.6654406 13.5991203 10.5254517 12.3161555 15.9075906 12.5678773 14.4828463 8.5862284 9.5130588 12.3219590 11.9691412 4.3420498 5.4454817 9.1141650 10.8330374 -1.8672258 11.8335792 5.3224221 5.7100267 4.5588615 10.7603595 12.1574776 10.3611157 12.3163106 13.1526227 7.2094134 11.1836367 11.0395822 11.5064145 11.5971435 5.6244519 11.5933096 13.1296007 -0.8674890 10.0353497 9.6537073 2.6586685 5.9843478 9.9192757 11.0614862 10.6507591 10.3718978 1.5920144 10.7140336 13.9937573 9.8575379 10.3347216 9.1605038 -0.00973160 -0.00973160 -0.01020700 -0.01805300 -0.01805300 -0.02367700 -0.01447800 -0.01530300 -0.01530300 3.65690000 3.65690000 0.69974000 0.00836090 0.00072342 0.00127370 2.10030000 -0.75278000 -0.00473650 -0.00473650 -0.02189600 0.00168990 0.01812900 0.01365800 0.01365800 0.01365800 0.01156500 0.01156500 0.01156500 0.01435600 0.02822600 -0.00973160 -0.00546150 -0.01805300 -0.02367700 -0.02367700 -0.01447800 -0.01447800 -0.01530300 -0.01530300 -0.01530300 0.68706000 0.68053000 -0.78174000 0.00321670 0.00321670 0.00321670 0.00321670 0.00000000 0.00794330 0.00127370 -0.77700000 -0.76499000 0.01351800 -0.00473650 -0.00473650 -0.00473650 -0.02189600 0.00168990 0.72455000 -0.77140000 -0.75394000 0.01365800 0.00335560 0.01156500 0.01156500 0.01435600 0.00780410 0.01037400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 0.000 8.3383910 10.1855053 8.7408524 7.6756297 4.6403896 9.9383415 2.5920384 NA 8.7555646 6.5163020 -1.8672258 6.7979338 -0.2824387 10.1878802 9.1005443 0.7175613 8.0454872 9.5070939 11.1679123 8.4409368 9.8817339 8.4352364 10.3831922 3.1325933 9.9302592 9.6644665 1.7175613 NA 10.0659195 5.5163020 12.4853308 12.0921469 6.9527762 10.6465719 7.3757719 9.2266754 5.3517661 1.1325768 0.1326426 3.0868007 7.6344350 9.1070122 10.1542717 4.2200590 8.6204075 5.1986867 9.9253880 7.3590098 9.5302723 NA 7.9654876 0.9399788 7.7194374 10.0406074 7.7510385 7.3050248 9.1466181 7.7546497 8.8252132 -1.8672258 13.7149455 -0.2824387 10.3447901 NA 8.6214420 4.9270146 7.5419887 7.2848824 15.854250 6.002963 8.929448 11.850488 10.511976 10.118084 13.369247 12.605860 8.311997 11.558207 12.410611 10.581230 9.114165 8.624451 -1.867226 7.174257 12.434380 11.032332 7.307523 9.068499 8.974948 10.027415 10.330269 6.327355 7.612378 12.338009 6.235886 -0.867489 10.420310 8.722633 11.515762 9.869000 7.734368 8.402893 12.023432 6.691019 11.753888 9.665441 10.252187 8.667873 11.680095 9.566183 11.043240 8.797045 NA 8.508929 7.941562 11.833579 5.380525 10.789023 10.760360 7.302523 13.813946 10.113094 9.623449 13.041084 10.896018 10.039864 1.302524 TCGA-A2-A1G6 50 0 NA 501 breast stage iiia t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 0 10.614445 9.710046 11.406813 9.238570 8.755850 9.227374 9.653210 10.191198 10.380701 13.961839 11.403264 11.004480 2.939565 12.462015 3.545277 10.157467 7.170887 9.359247 10.804555 12.556031 7.685127 12.549784 8.121632 10.011257 10.884114 4.088421 NA 8.607059 8.215281 3.842265 8.220131 8.806169 1.223361 4.248892 10.151556 9.890213 10.268919 11.072871 10.131104 11.401486 6.907853 11.939684 14.440533 8.380369 9.424428 11.449939 11.156413 5.875431 3.585924 9.065256 12.921501 -1.583809 11.589833 5.663928 6.273980 4.565749 10.726328 12.228177 10.109487 12.738139 12.893695 8.067051 11.227374 11.523888 11.505616 11.199816 4.719780 12.045015 11.468228 NA 10.226973 9.346737 4.323132 4.891735 10.887929 10.464146 10.421273 9.707170 6.015912 9.575871 14.135576 13.104742 10.150709 10.040795 4.7190e-03 5.5459e-04 5.5459e-04 -4.1585e-04 -7.6280e-04 -2.7724e-04 -1.3858e-03 -5.6516e-05 -5.6516e-05 -1.1087e-03 -1.1087e-03 -1.1087e-03 8.2683e-04 4.7190e-03 2.6357e-03 2.6357e-03 2.6357e-03 0.0000e+00 0.0000e+00 -1.5243e-03 8.0663e-03 4.0243e-03 -8.3160e-04 -8.3160e-04 -8.3160e-04 2.4969e-03 2.4969e-03 1.5447e-02 1.9418e-03 4.7190e-03 4.7190e-03 6.9435e-03 -7.6280e-04 -2.7724e-04 -9.7017e-04 -1.3858e-03 -1.3858e-03 1.1093e-03 -5.6516e-05 -5.6516e-05 -8.4385e-03 -8.4385e-03 -1.1087e-03 2.6357e-03 2.6357e-03 2.6357e-03 2.6357e-03 4.7190e-03 4.7190e-03 2.6357e-03 2.6357e-03 2.6357e-03 2.6357e-03 0.0000e+00 0.0000e+00 0.0000e+00 -1.5243e-03 8.0663e-03 4.0243e-03 -4.3967e-03 -8.3160e-04 -8.3160e-04 4.0243e-03 2.4969e-03 2.4969e-03 1.9418e-03 4.5800e-03 -1.2024e-02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.0056507 11.9639786 6.0884257 10.3176207 2.6324544 10.5654292 1.2233608 4.6639252 8.5871763 10.0403382 2.5859240 8.8723027 3.9705868 9.7152077 9.4110601 2.5034505 9.4881322 10.2321833 9.8056310 9.6550013 9.6911173 8.2583498 10.7466364 3.3701922 10.2345818 10.5258303 6.2425473 NA 9.8651482 5.7735507 13.6560456 12.0125388 8.1841841 11.0325484 7.8190116 9.1989979 5.0159123 2.8083233 -0.5840251 0.7379463 8.0616579 7.6082925 9.7530639 5.9782414 7.4311357 5.6544040 10.5809066 5.2488915 10.1704697 0.7379463 11.9461621 2.6639366 5.5555524 9.7573738 5.0032154 6.4658488 9.2047179 7.7888645 7.7558496 NA 14.0825288 0.7379463 10.5433491 NA 8.1692165 7.8610143 8.4780456 8.8661798 11.435114 3.170886 8.719780 12.462015 10.411498 10.162514 12.556031 12.137206 9.390787 10.773277 13.025871 11.401486 9.065256 7.899815 -1.583809 8.345258 11.550105 11.069516 6.600875 9.368741 9.274758 7.603352 10.234658 6.164193 7.652014 11.403264 5.438366 2.939565 6.654404 5.094633 11.957580 10.693287 8.954188 7.827510 10.800244 7.421624 12.574972 10.268919 10.738491 9.689212 11.764451 10.374915 10.586864 8.689795 NA 9.504013 7.751390 11.589833 6.081335 10.836694 10.726328 6.644818 14.756910 10.398993 11.062333 12.753831 10.191610 9.878502 3.000955 TCGA-A2-A259 70 0 NA 1596 breast stage i t1c n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 6 NA NA 3 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 11.2932204 10.2266170 11.8414797 10.5065927 7.7540169 8.4066604 9.9169958 9.7863922 9.1978681 13.4399522 11.2151483 10.3840033 0.6371929 11.8104555 3.6371581 9.8597065 6.3541436 9.0974043 7.9464022 12.2873971 4.0965823 13.3777772 5.2810083 8.7973875 11.1300077 7.2251178 NA 9.8613622 9.0268919 1.7746711 9.2518630 8.8348613 0.9001809 4.8850813 10.1249931 9.9622336 10.0887763 12.6273280 10.0717813 11.6814106 8.0949444 11.7083473 15.1279413 8.1612795 9.8673418 11.3703380 11.6262637 4.4445081 0.9001809 9.7346585 11.6420758 0.6371929 10.8409905 5.7828305 7.1544293 4.7075414 10.1685346 11.6451615 9.7853755 12.5572082 12.9672297 7.1669745 10.8108303 10.6242551 11.7549261 11.9222085 5.4851499 11.5631526 12.9936601 1.4851692 10.5428409 10.3933759 3.3622454 6.3973734 11.9679580 10.7240854 10.3309885 11.5122881 4.4445081 7.1825036 12.8253710 12.5432921 9.0965847 8.9527555 0.00694350 0.00694350 0.02763800 -0.00968060 -0.00968060 -0.01780300 0.00033849 0.00000000 0.00000000 -0.41135000 -0.41135000 1.70920000 -0.00830050 -0.00968060 -0.00207840 0.00027728 0.00027728 -0.16494000 0.00471900 -0.01216200 0.00388540 0.01558700 -0.26817000 -0.29508000 0.38700000 0.02496900 0.02496900 0.02496900 0.00777830 0.00694350 0.00694350 -0.00176440 -0.00968060 -0.01780300 -0.01780300 0.00033849 0.00033849 0.00000000 0.00000000 0.00000000 -0.00609040 -0.00609040 -0.41135000 -0.01310000 -0.01310000 -0.01310000 -0.00097017 -0.00968060 -0.00968060 -0.00207840 0.00027728 0.00027728 0.00027728 -0.16494000 0.00471900 0.00471900 -0.01216200 0.00388540 0.01558700 -0.42909000 -0.32170000 -0.29508000 0.00750000 0.02496900 0.02496900 0.00777830 0.00805670 0.01516800 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.706 0.000 0.000 0.000 0.000 8.85728964 12.02656933 8.43286798 9.72832394 5.42374959 10.13540392 4.80707666 0.63719289 8.21760007 8.07178144 -0.09974179 7.81905054 3.56315813 10.53409089 9.66561182 1.48516918 9.97700309 9.21004275 10.85486854 9.17941127 9.39760020 8.08506290 11.08071835 4.04314324 10.18366180 10.21533703 7.87364589 NA 10.54404367 4.17320740 13.37042271 12.08402964 8.58084005 10.46274795 8.47383480 9.42113344 3.74148856 2.01567597 0.90018091 -0.68478159 8.92163032 8.61214125 10.01999332 6.30957821 7.34136137 6.47509624 10.99558451 7.21307019 8.99206368 1.12260646 10.72885297 4.07011450 5.05669190 9.89054686 5.57919825 5.76643615 9.85244337 8.35002379 6.24003760 -0.68478159 13.64218109 -0.68478159 10.21835375 -1.68454970 9.50566708 5.45477799 7.99294457 8.81407419 13.368793 4.869812 8.697849 11.810455 10.173595 10.156789 12.287397 13.429130 9.100882 10.996024 13.102668 12.085166 9.734658 8.070112 1.122606 8.765405 11.933152 11.260486 7.692436 9.311699 9.544645 7.109641 10.299850 7.116125 7.423750 11.215148 5.741489 5.281008 6.332033 6.004176 11.930165 10.216469 9.808990 8.631507 12.758816 7.070112 13.113436 10.088776 10.569073 9.458608 12.597517 10.475096 10.710759 9.375245 NA 8.985447 7.312405 10.840990 6.846606 11.015881 10.168535 7.869814 13.962569 10.528025 10.259937 12.909783 9.981005 9.806577 1.315218 TCGA-A2-A25A 44 0 NA 3276 breast stage iia t2 n0 (i-) m0 female 2003 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 6.242351e-07 10.8038006 10.0920772 11.7962880 9.6933103 8.3095009 9.4323262 9.9923277 10.2230355 10.3395637 11.4137659 11.3454765 10.7229931 4.0271806 11.5502022 3.6121519 10.2832625 5.8851668 9.3571057 10.1687244 12.0450758 3.2148087 13.2640627 7.2059877 9.3372169 10.3939927 7.5524877 0.4422269 12.2441879 9.5450730 2.5577042 7.8041659 8.2991663 0.8572644 6.3729591 10.1675886 10.5212626 9.7554833 11.9717342 9.7607652 11.4969397 4.0470846 10.1904152 14.6941978 8.1631278 9.9267096 11.1899957 10.9579221 5.5715039 4.3650556 9.5358599 12.5612715 -1.1427356 11.6905453 6.0371691 6.6020931 4.7641497 10.8214202 12.0493985 10.3573548 13.0455782 13.0246388 7.7291653 11.1465583 10.9714707 11.7676215 11.5572660 5.0764266 12.0116033 11.4135264 0.1791288 10.4254534 9.3105305 4.3003727 5.6320471 10.7680899 10.3408237 9.9155899 9.7066649 3.7641550 10.0199658 13.9053209 13.0006032 9.9852542 9.7535922 0.05346500 0.05346500 0.34730000 0.00000000 0.00000000 -0.00532640 -0.00622860 0.00847430 -0.34044000 -0.00332430 -0.00332430 -0.00332430 0.00604400 0.00604400 0.00485790 0.37693000 -0.00070529 -0.00439500 -0.00439500 -0.00470790 0.00180300 0.00402430 -0.29154000 -0.29154000 -0.29154000 0.02239100 0.02239100 0.02426800 0.00138680 0.05346500 0.05346500 -0.00871460 0.00000000 0.00861350 -0.00816280 -0.00622860 -0.00622860 0.00847430 -0.34044000 -0.35175000 0.03312700 -0.00136390 -0.00332430 0.00680440 0.00680440 0.00680440 0.00680440 0.00604400 0.00294980 0.00485790 0.00485790 0.00263570 0.00263570 -0.00439500 0.00235810 0.00235810 -0.00470790 0.00180300 0.00402430 -0.34200000 -0.29154000 -0.29154000 -0.02712400 0.04684200 0.02239100 0.00138680 0.01976300 -0.33629000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6443461 12.8156766 8.3218055 10.3879100 4.8086631 10.3815567 2.4422269 3.9447273 8.6500501 9.0740058 0.4422269 9.2939661 3.6121519 9.9964914 9.5890031 1.5576797 10.3795962 10.0495526 10.2021105 9.1246319 9.4656164 7.9513378 11.8635859 3.2148087 8.9820273 9.9739286 5.8516141 -1.1427356 10.3355239 4.7520795 13.2794560 12.1468465 9.4553124 10.2439307 9.3832699 8.9858986 4.6516774 1.1791925 1.1791925 7.4847939 8.2527941 8.7835559 9.8302396 7.0271850 7.4947900 6.4608867 9.9064277 6.1791886 9.6929155 -0.1427356 11.6098495 3.4719678 5.6386184 9.6506680 6.0128368 5.4866178 10.1461259 9.1322203 7.4403426 -2.1430541 13.9233280 2.3166961 10.2618693 -1.1427356 8.0992431 7.3451000 7.9605476 8.7330092 12.7805367 5.1426626 8.3491131 11.5502022 10.3795962 10.2843108 12.0450758 12.5780385 9.2304893 10.9546336 13.6754425 11.3092436 9.5358599 8.8677881 -0.1427356 7.4327991 11.3679004 11.297091 6.764151 9.504718 9.096262 7.585180 10.426408 6.957923 8.482969 11.345477 6.438461 4.027181 6.907108 6.829321 11.655124 10.516141 8.345964 8.473809 12.209579 6.658160 12.445300 9.755483 10.673844 9.293451 11.110664 10.765089 10.578573 9.456243 NA 9.338842 7.170142 11.690545 7.916604 11.145985 10.821420 7.316692 14.469092 10.259739 10.740476 12.525757 10.611939 9.817624 2.442227 TCGA-A2-A25B 39 0 NA 1291 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 1 1 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.768666e-06 7.629541e-07 10.8892929 10.4147792 11.9764937 10.2461736 9.2449453 8.4500301 10.0062813 10.9483439 9.2457642 14.5590488 10.8795636 11.3475090 -1.5374241 11.5107420 4.2956569 7.0211865 6.6575228 8.5791100 9.4220435 13.2831944 2.1632089 13.9105273 -1.5374241 8.8679076 11.2004359 9.7195644 3.1066163 8.2604275 10.9982844 0.4627853 7.3994044 8.0626787 0.4627853 4.8721590 10.5791100 10.8095568 9.7931227 11.2443307 10.0714829 12.2412539 2.1632089 11.1376204 14.2032584 8.0824541 8.7981004 11.4382558 11.2982244 3.6722217 3.9221978 10.6261012 10.7183848 0.7846715 11.6858628 6.2375522 7.1562530 5.0477303 10.7662615 12.2050755 9.8864073 12.2064434 13.2644239 6.8378058 11.1000702 10.3867508 11.8792997 11.3072757 5.4052810 12.7177208 11.2600223 NA 10.1174021 9.8290883 2.5510730 6.7295528 10.8369905 10.6301842 11.5362382 10.5621139 5.0173563 8.2717301 12.4454923 11.2387878 9.5693289 8.9354568 0.4158300 0.8776700 1.8291000 -0.0645080 0.6753000 -0.4106800 1.2290000 0.5301100 -0.5474400 -0.3319100 -0.3240300 1.1910000 0.4809600 -0.1080200 -0.0865180 -0.1729700 -0.1729700 -0.4693500 0.5283600 -0.1706900 3.5906000 3.6569000 0.3445300 -0.5037000 3.6569000 -0.0358570 -0.0358570 -0.0358570 0.3810500 -0.1888600 -0.0280810 0.0879690 -0.0645080 0.0000000 0.1452700 0.0790350 -0.0861200 0.5122800 -0.5474400 -0.6008000 0.2466900 0.7081900 -0.0041546 -0.4947500 -0.4947500 0.3649300 0.3649300 -0.1080200 -0.4840700 -0.4389700 -0.1729700 -0.5342900 -0.5342900 -0.4693500 0.5283600 0.2500500 -0.0631660 -0.1143000 -1.1841000 0.0751280 -0.5585700 -0.5037000 -0.5488500 -0.0358570 -0.0358570 0.0668020 -0.1628100 -0.5720900 0.373 -0.108 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.416 0.416 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 -0.324 0.464 -0.130 0.365 0.326 0.000 0.373 -0.108 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.416 0.416 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 -0.324 0.464 -0.130 0.365 0.326 0.000 8.26204785 12.35767854 6.23755225 8.63644337 3.98632901 10.97920481 0.04767798 NA 8.89007880 5.92219785 NA 8.58005840 0.04767798 11.33755534 8.83454279 0.04767798 7.49618909 10.51431492 8.92526839 10.03024682 10.02782059 8.57780985 10.29010872 2.55023579 8.86044081 9.14136611 0.46278526 -1.53742411 10.86897106 3.74817138 12.16331415 12.11706643 7.00966069 10.11022450 9.08847502 9.46065125 4.61251174 0.04767798 0.46278526 4.61251174 7.16666926 6.86790758 11.19980213 0.78467148 6.80252670 4.48513697 9.87480665 5.13519008 10.76340460 NA 10.08710464 3.21764950 4.90571191 10.44608746 7.52564843 5.70117198 8.98828675 8.39350329 6.53958225 NA 14.14493771 -0.53721474 10.54091690 NA 9.66305174 4.07747374 7.87850772 7.01351251 13.029257 5.217653 8.400876 11.510742 9.949601 10.625472 13.283194 17.107055 9.151016 10.765691 13.628419 10.576183 10.626101 9.768828 2.632687 10.141806 11.831273 11.082298 7.457120 8.911915 9.295656 8.108425 11.408193 6.237552 8.568674 10.879564 5.244126 NA 4.691584 8.770741 11.259211 10.665502 6.677085 8.448608 11.914750 5.880619 12.012036 9.793123 10.348081 9.258806 10.202125 10.319970 11.207600 9.317634 NA 8.137770 6.270121 11.685863 9.194934 10.986818 10.766261 7.473993 13.547990 10.506135 9.944566 12.142796 10.437181 10.045849 1.632687 TCGA-A2-A25C 50 0 NA 523 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 10.4845515 10.4934079 11.5546659 10.7326660 8.1411436 10.3143211 9.3299797 10.4825514 9.0653623 14.5139952 10.4039433 11.4603642 -0.1808223 12.8936080 4.4339276 8.8960311 5.5940021 8.7521685 11.5881236 13.3280627 2.4630731 13.0960307 6.9277400 9.4151863 10.9093280 10.0408027 0.8191777 10.4444678 10.9563669 3.4339209 7.0600074 7.5657297 NA 4.9891390 10.8795738 10.2365407 10.8057688 11.5439426 8.9172476 11.5345342 0.6265793 10.1977814 13.8361544 8.7684804 9.1264164 11.9586071 12.0066450 5.0286708 4.8636114 9.3359006 11.4410385 -1.1808223 11.7388239 7.1092341 6.3110689 5.1411426 11.5182458 12.0432173 10.4827737 12.8825264 13.5158300 7.5707597 10.5368921 10.3968380 12.1761490 10.8408896 5.4116737 11.8692343 9.4814388 -2.1804953 9.7181948 9.5330316 3.9730234 5.6329981 11.4782081 10.6239517 9.8318402 10.2029199 2.1411385 8.0766035 12.1906520 10.7056743 10.1773174 9.0712897 -0.60613000 0.57202000 0.57202000 0.02314500 0.00694350 -0.59063000 0.01023600 0.54947000 -0.59439000 0.00875280 0.00875280 0.00875280 0.00402430 0.00402430 -0.00180140 -0.00180140 0.01363200 -0.61124000 -0.00470790 0.02890300 0.57113000 0.49217000 -0.03435900 -0.03435900 -0.03435900 -0.06450800 -0.06450800 -0.06450800 -0.02304800 -0.65724000 -0.60613000 0.00805670 0.02314500 -0.59063000 -0.57970000 0.02172200 0.02118300 0.54947000 -0.59439000 -0.64010000 0.00930980 -0.65305000 0.00875280 0.00000000 0.00000000 0.00000000 0.00000000 0.00402430 0.00402430 -0.00275140 -0.00180140 -0.61383000 -0.61383000 -0.61124000 -0.00470790 -0.00757310 -0.00581400 0.57113000 0.49217000 -0.00541840 -0.03860600 -0.03435900 -0.64354000 -0.06450800 -0.06450800 -0.02808100 -0.00027724 -0.66661000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2131424 12.9740337 4.8526381 9.8100287 3.8415807 10.3617639 2.5196677 -0.5957508 8.2693960 7.5874002 NA 8.1764709 1.7260901 10.5168348 9.1590655 3.9066790 9.0818977 9.5931790 10.1648980 10.0492361 9.1811319 8.9388054 10.4576515 3.1411385 8.7163047 9.1506924 2.5741015 1.7260901 10.3284958 0.9891390 11.6041571 11.4094518 8.1579522 10.5373203 10.3065532 8.8704245 3.9484981 1.2786390 -0.1808223 2.5741015 7.6313932 8.3020238 10.4517565 4.4485706 7.3052464 6.5437294 10.1718108 5.3890711 9.6987989 NA 10.4827737 3.6265676 4.0860024 9.7848449 5.2102447 5.8526381 9.6857219 8.4079301 6.8471213 -1.1808223 13.3281245 1.7260901 10.7397545 NA 8.2837611 5.4265466 7.9651476 8.3871717 12.7636806 6.5092129 7.9394535 12.8936080 10.6810876 11.0656593 13.3280627 12.9690024 9.4903144 10.7598614 13.0591870 9.9504295 9.3359006 9.9198780 -0.5957508 7.4246954 12.2590465 11.148451 6.400417 8.536035 9.367556 9.906347 10.765360 7.189903 9.991643 10.403943 4.491641 3.404181 7.864975 8.192244 10.677002 10.861046 8.512616 8.301015 13.150692 6.480994 10.989031 10.805769 10.609157 9.301519 10.810915 9.587814 10.822382 9.225952 NA 9.094176 6.943336 11.738824 8.136628 10.069218 11.518246 7.165729 12.582791 9.793989 9.703768 12.624657 9.733227 9.772685 1.819219 TCGA-A2-A25D 90 0 NA 552 breast stage iiic t2 n3a m0 female 2010 NA yes infiltrating lobular carcinoma 22 white not hispanic or latino NA NA 5 2 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 5.201959e-07 9.5540393 9.0459248 11.4655027 8.3367538 9.2953835 9.3452254 10.2116864 9.2617691 10.8606851 7.7795605 11.0226108 10.2328419 1.1920679 13.2295281 2.0665714 8.5200222 7.2653450 8.7808101 11.0818530 11.5443229 1.9290714 12.8743587 2.9994589 9.0818530 10.2360343 7.5729177 2.1920995 10.0726995 9.1424086 0.6071054 8.4080329 6.6569811 NA 3.9994499 9.4604426 9.5467124 8.9414063 10.3782099 9.7299611 10.4732529 0.1920679 10.3376032 14.6588943 6.0380037 10.4419991 10.5718349 10.1365636 3.9646851 0.6071054 8.7351275 10.2559401 -1.3928946 10.5714739 6.9865111 6.8550603 5.0500750 9.7969577 12.0828665 10.4201125 10.9840724 12.6223739 8.2346670 10.1024885 9.4937900 10.6985685 10.2005242 3.6945905 11.8191734 12.5544047 2.5140212 9.9536468 8.9919169 2.5255177 6.6071335 10.1741385 9.4604426 10.7035188 9.8580236 3.7770620 8.4305002 12.6199322 11.9983767 9.7826826 9.0048078 2.2193e-03 -1.2851e-02 1.3882e+00 -3.7082e-02 4.7358e-01 -1.1198e-02 -5.4017e-01 5.5514e-01 -1.9399e-03 1.0074e+00 5.1368e-01 1.3762e+00 2.9133e-03 7.9175e-03 2.2193e-03 -9.2666e-03 -3.8615e-05 -2.1098e-02 -2.1098e-02 -5.1695e-01 4.1034e-02 4.3021e-03 -5.2930e-01 -2.8052e-03 5.2118e-01 3.3299e-03 3.3299e-03 5.1368e-01 1.3772e-02 -5.5226e-01 2.2193e-03 -7.3339e-03 -4.1609e-02 -4.9289e-02 -8.8526e-03 -9.9565e-03 -4.2929e-03 5.5514e-01 -5.2379e-01 -5.4189e-01 1.2795e-02 -4.9844e-03 -5.3896e-01 5.2923e-01 5.1089e-01 9.4491e-03 4.6133e-02 7.9175e-03 2.1463e-02 2.2193e-03 -9.2666e-03 1.5255e-03 1.5255e-03 -2.1098e-02 -2.1098e-02 -2.4524e-02 2.5812e-02 -8.0244e-03 4.3021e-03 -5.5936e-01 -5.2930e-01 -3.3677e-02 -4.5088e-01 -5.2981e-01 3.3299e-03 1.3863e-04 1.6146e-02 1.9783e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 0.521 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.556 0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 0.521 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.556 0.501 0.000 0.000 0.000 9.5613294 11.7493997 6.5786761 8.9832584 3.7746500 10.6600407 4.7156573 0.6071054 8.8371536 10.5872726 NA 7.6866182 2.1920995 10.4724797 9.4305002 2.1920995 8.4031727 8.8419505 9.0428033 11.9140492 9.8477336 7.3982956 11.6364203 2.6937434 6.9200157 9.9657843 4.5613322 NA 10.9188814 1.9290714 14.1076638 11.9667454 8.3636893 9.6329647 11.6066047 10.1084727 4.2218462 2.6071291 -0.3928946 3.1307003 8.7695245 9.1238180 10.3393005 5.8359519 8.5910956 7.2901276 10.3490213 4.5844154 10.1390018 -1.3928946 9.8668763 2.6071291 4.2795604 9.5476230 6.0508216 6.0665650 9.7221767 8.9908375 7.5259960 -0.3928946 14.3437993 2.9290524 10.4144880 NA 7.9245459 6.0249867 7.3041003 8.8055782 11.3733245 4.8739214 9.1385145 13.2295281 9.7901481 11.7640062 11.5443229 11.6241154 9.3396567 10.4581012 12.8974400 12.8984477 8.7351275 7.7920087 0.6071054 7.4867160 10.8867437 10.9450337 6.2144629 8.7770580 9.2107595 7.9290613 9.9854821 7.9063411 6.6998903 11.0226108 5.7466836 0.1920679 3.8165895 7.8944528 11.0979840 10.6902799 8.4092615 9.1297147 10.3847994 7.5019510 12.9238714 8.9414063 10.7935569 10.0904450 10.5140237 9.5064901 10.3324994 8.4958762 NA 9.3133787 7.5642349 10.5714739 3.5613261 11.1250485 9.7969577 7.2689115 14.9791139 10.1793596 10.8954224 12.5523940 10.1394891 9.3561645 2.1920995 TCGA-A2-A25E 34 0 NA 3204 breast stage iiia t2 n2a m0 female 2004 NA yes infiltrating ductal carcinoma 6 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 2.774378e-07 10.05506073 9.96260498 11.61391683 9.18817662 9.14475433 9.54346959 9.96986163 10.50058508 9.17253752 14.86489606 10.30035977 10.75828610 -0.08405849 12.81900162 4.08585801 7.43163549 6.21971645 8.38896485 8.74882582 13.01605050 1.08583252 13.06969886 3.88556460 9.85060942 10.95165124 8.78732765 NA 10.27641710 9.36852021 1.13835577 8.36577214 6.87013165 -0.66909746 3.46025765 9.91264463 10.71710514 10.17959614 10.10534847 9.32956361 11.16998017 2.13832300 11.02967788 13.84392970 7.92513010 10.45832274 11.77508224 11.27073607 3.33097423 5.97482984 8.99897171 10.08502557 NA 11.49682238 4.68852728 5.87786692 4.55979158 9.71197527 11.94660287 9.34917351 11.78385792 12.99847290 8.10905021 11.72248536 11.59424244 11.33677321 10.81403324 4.59775760 11.69401284 10.19554630 -1.66886808 10.07874658 9.61983940 3.08639315 5.26171133 10.46828466 10.28880080 10.47276109 10.58895032 2.72329643 9.63703490 12.08492117 11.21361630 10.13065962 9.00251435 0.0056919 -0.0040162 0.6021400 0.6289700 0.0150280 0.0221640 0.0234260 0.0037465 -0.6458400 -0.0056757 -0.0056757 1.1674000 -0.0099565 1.0538000 -0.0038779 -0.0038779 -0.0038779 -0.0001422 1.9556000 -0.6703900 0.0580810 -0.6329200 -0.0556340 0.6131700 0.6131700 -0.0607480 -0.0607480 -0.0607480 1.1351000 -0.0297210 0.0056919 -0.0117490 -0.6156600 0.5447100 -0.0345840 -0.6149900 0.0169850 -0.3565800 -0.6458400 -0.6674400 0.0195030 0.0031910 -0.6673500 -0.6308200 -0.6277900 -0.0175290 -0.0175290 1.0538000 -0.0128510 -0.6653100 -0.0038779 -0.6488100 -0.6718200 -0.0001422 0.5508900 0.5508900 -0.6516500 -0.6594700 -0.0215100 -0.7102400 -0.0556340 0.6131700 1.4976000 -0.6393500 -0.0607480 0.0055529 -0.0157410 -0.0502350 0.000 0.000 -0.649 -0.649 0.000 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 0.236 0.000 0.000 -0.649 -0.649 0.000 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 0.236 8.09418539 12.08627813 8.60593355 9.79755956 4.11233316 10.62099211 1.91594151 NA 8.62444493 7.30251647 NA 7.41045814 1.13835577 11.49964536 9.31894766 1.50090401 8.15274724 9.65852588 8.01045314 10.04693518 10.67705195 7.66412867 10.13187316 0.91594151 7.48579148 9.45767780 4.05889657 -1.66886808 10.17607115 3.23786960 11.85600456 12.65620840 8.09086137 10.40377579 8.54893093 9.55376809 3.23786960 -0.08405849 0.33101724 4.23786195 8.42505095 7.61406122 10.22541208 2.65289945 8.53523882 7.53554445 9.85306435 7.93645303 10.37570891 -0.66909746 10.02967788 3.23786960 4.52079937 9.65325640 6.29444798 4.43949681 8.34080169 7.70383853 10.47467534 NA 13.77750733 -1.66886808 10.60476883 -1.66886808 8.37809714 4.57890249 8.36714694 8.68412022 13.064465 6.231839 9.270553 12.819002 10.369206 10.739568 13.016050 11.642580 9.128635 10.578011 12.872009 11.692506 8.998972 8.600100 3.085867 7.714678 11.359915 10.672492 7.444715 8.994531 9.566389 9.923897 9.775445 5.449915 7.834799 10.300360 5.953025 -1.668868 5.757239 7.669710 10.061868 10.119284 9.213616 7.407789 11.080633 5.661889 14.600906 10.179596 10.897979 10.111513 10.882441 8.673048 10.627603 8.632469 NA 8.327263 5.490846 11.496822 6.195159 10.813781 9.711975 7.038332 13.481473 10.513988 9.758286 12.465881 9.131873 9.769765 1.500904 TCGA-A2-A25F 66 0 NA 322 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 10.8990593 10.1253100 11.4813603 10.6050707 8.4351456 9.9254714 7.8307307 10.9066274 9.8204946 11.4388979 11.0251089 10.7417499 0.6277936 9.9919254 3.7707445 10.0339958 4.5506237 9.2492322 10.3940437 4.2522794 NA 8.5114522 6.9616916 9.1933753 9.2127534 6.3602414 NA 12.2070879 10.3588269 4.1721114 8.5761582 8.3305405 0.3647965 6.1249774 10.0428283 11.0145515 9.8461523 10.7317342 10.0872224 11.4182750 1.7432564 7.1721114 14.9559865 8.4067548 9.4935241 11.4822696 11.2650194 4.3282333 NA 9.9897345 11.5106885 -1.9573557 11.1830190 7.6667097 9.3113703 6.7639281 10.7282341 11.8078035 10.2740495 11.8891022 13.0072143 6.4479692 11.0035543 10.6047916 11.6028028 11.4679131 5.2292880 12.3336391 8.3568450 1.8501993 10.4561918 10.1881236 2.0634339 8.0114951 10.3854585 10.4919769 10.4386302 11.0389487 6.0028308 5.7775381 12.8157098 12.3293139 9.8299146 8.9831418 2.9103e-02 1.2329e-01 6.6315e-05 1.0206e-03 1.3632e-02 -3.5312e-02 -3.0033e-02 -3.9396e-03 5.6919e-03 7.4265e-02 7.4265e-02 7.4265e-02 -2.8628e-02 -2.8628e-02 -2.1510e-02 9.3098e-03 9.3098e-03 2.7745e-03 2.7745e-03 -6.1286e-02 -3.2450e-02 -3.5585e-02 -2.6167e-02 -2.6167e-02 -2.6167e-02 4.8830e-02 4.8830e-02 4.8830e-02 -1.9687e-02 2.9103e-02 2.9103e-02 5.5459e-04 1.0206e-03 -3.5312e-02 -3.6677e-02 -3.0033e-02 -3.0033e-02 -3.9396e-03 -3.9396e-03 6.2481e-03 -2.4434e-02 4.3015e-02 7.4265e-02 -1.6567e-02 -1.6567e-02 -1.6567e-02 -1.6567e-02 -2.8628e-02 -2.8628e-02 -2.1510e-02 -2.1510e-02 9.3098e-03 9.3098e-03 2.7745e-03 2.7745e-03 2.7745e-03 -6.1286e-02 -3.2450e-02 -3.5585e-02 -3.7626e-02 -2.6167e-02 -2.6167e-02 -4.5635e-02 4.8830e-02 4.8830e-02 0.0000e+00 -1.3862e-04 -3.5312e-02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.4251821 12.8551560 1.5022797 9.1944791 6.4393040 9.8229579 5.4774572 1.2127561 8.5386833 8.0258217 3.4351485 9.7650168 4.4003808 10.9935665 9.0064470 2.3647685 12.2155683 9.4129707 8.4617352 8.1021726 9.1811321 7.8741355 11.5873098 4.4178660 8.1539639 10.2267738 5.4522198 NA 10.9158878 2.5022542 13.3964921 12.0749601 8.7749959 10.2960849 10.0564999 9.8657974 5.2227389 3.8241874 0.0427844 0.0427844 8.1421760 8.4960988 8.1408604 7.1849358 5.0773541 5.3737456 9.9628088 4.8757162 9.5109431 2.6866798 10.6760506 5.6126828 4.0651931 9.7129843 5.6736412 8.9489673 10.5195745 11.3417500 9.4548689 4.0201110 13.6334446 2.6277936 10.4508927 NA 9.5431722 4.7010389 8.2351210 8.6193125 10.7596477 9.2534996 8.4722351 9.9919254 10.3771016 10.4251821 4.2522794 10.0662361 9.3804502 11.3620770 14.0522633 11.0463462 9.9897345 8.2692403 0.3647965 7.8820322 11.3808682 10.875125 4.328233 9.453804 7.814318 9.093228 9.759961 9.496613 8.261997 11.025109 8.511452 2.949722 5.300215 8.555322 12.404429 11.940957 8.157494 7.875718 11.367993 10.384069 11.688057 9.846152 10.720768 9.024396 11.139214 10.781554 10.750187 9.882032 NA 9.581551 9.555569 11.183019 8.102173 10.826389 10.728234 8.450638 14.369346 10.366446 11.359817 12.929382 9.977993 9.526644 5.612683 TCGA-A2-A3KC 55 0 NA 1102 breast stage iib t2 n1a m0 female 2011 NA yes infiltrating lobular carcinoma 2 black or african american not hispanic or latino NA NA 2 2 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 10.4779992 9.7670161 11.5457010 9.5194192 8.4353548 8.8746030 9.8070211 9.6021529 11.1053120 10.5819099 11.9154875 10.5549240 1.6760417 13.8546864 3.7915015 10.0496117 7.9386387 8.5201169 8.9207819 12.7706124 0.5060941 13.7061522 5.6146215 9.8030528 10.5862479 3.6760191 NA 11.8171863 8.9469656 2.5060941 8.8235093 7.1749816 1.3134781 5.5935599 9.9878960 10.3061875 9.9747206 11.1125017 10.1161986 11.3132502 10.6986975 11.0882385 15.2108918 8.6872735 9.5988537 11.6129866 11.1851367 5.7634833 4.9154874 8.9655280 11.5777265 NA 10.9591099 5.6760219 6.0606851 5.5935599 10.5839136 11.8578640 10.4544638 12.4201079 12.7046183 9.8822219 10.8209630 10.7791083 11.4011037 11.0776122 5.2340184 11.4513574 11.6229278 NA 10.3527622 8.6959211 3.7881637 5.9323612 11.1540046 10.2927746 10.1705438 9.5915689 3.8636511 10.0529910 14.2304238 12.3503119 10.2008897 9.9297377 -0.46238000 0.84613000 0.41346000 0.00180300 -0.00193990 0.00750000 0.00000000 -0.00105560 -0.00105560 0.00291330 0.00291330 0.00291330 0.00124810 0.00124810 0.01321300 3.65690000 2.76010000 0.00083195 0.00083195 0.00291330 0.00444110 0.00069327 -0.00691950 -0.00691950 -0.00691950 -0.00512270 -0.00512270 -0.00512270 0.43176000 -0.46238000 -0.46238000 -0.00055444 -0.01904000 0.00444110 0.00750000 0.00000000 0.00000000 -0.00105560 -0.00105560 0.00000000 -0.00193990 -0.00304750 0.00291330 -0.00332430 -0.00332430 -0.00332430 -0.00332430 0.00124810 0.00124810 0.01321300 -0.02890100 -0.45779000 -0.45779000 0.00083195 0.00083195 0.00180300 0.00291330 0.00444110 0.00069327 -0.46513000 -0.00691950 -0.00691950 0.00666530 -0.00512270 -0.00512270 0.43176000 -0.00332430 0.00291330 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4840918 13.4427345 7.3795404 11.1778587 2.8963494 11.0780861 2.0910566 1.0910566 8.7337126 9.7486752 -1.4937027 9.4242144 3.8280222 9.7155499 9.7415125 3.6353829 9.6621797 9.9665525 10.5576454 9.9969474 9.5228283 8.4368339 11.2276230 3.8280222 8.6146211 10.4122355 5.3005118 -0.4939059 10.8138665 3.5060941 12.2156112 11.6105315 8.6353797 10.3266744 8.6054443 9.3523703 6.8548248 2.2065495 1.8280222 5.5173229 9.1925971 9.8223780 9.9752295 5.3134527 8.9118974 7.7057685 10.2259132 6.7008530 9.4653740 NA 11.7807659 2.4129983 5.4009136 9.4207731 6.5561627 5.2609854 9.8347714 8.6583815 7.4919389 0.5060941 13.3109334 3.0910566 10.3114374 NA 8.1553526 6.9939370 7.4976188 8.8098774 14.436530 5.715550 8.250930 13.854686 10.279236 10.275934 12.770612 11.647246 10.903343 10.641164 13.142438 12.010171 8.965528 8.417488 2.506094 7.157148 11.991800 11.4489775 7.6405226 8.1372735 8.5463863 8.8724188 10.6869537 7.3887397 7.1281480 11.9154875 6.9531802 5.9490399 7.2134552 7.0688728 11.2327404 10.6087284 7.9798024 8.8930366 12.0744090 5.9069772 12.3628061 9.9747206 10.2030641 10.2726255 11.7574310 10.8206797 10.8158571 8.5131239 0.8280628 9.2365498 6.5829127 10.9591099 6.6959215 11.0939819 10.5839136 7.1827946 13.4425951 9.2800599 9.7845460 12.6486025 10.9823364 9.8252042 2.0910566 TCGA-A2-A3KD 47 0 NA 1206 breast stage iiia t3 n1mi m0 female 2010 NA yes mucinous carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 1.387189e-07 10.6071104 9.9215051 11.9848202 10.2218371 8.4736051 8.6013403 10.5497698 9.1626149 10.1961804 13.7423748 11.3974814 10.4174786 -0.7538960 13.1262900 3.9184149 10.8146578 7.1767267 8.4456613 11.9294223 13.3850607 4.7378436 13.5835064 9.4566604 9.0317847 10.8398470 9.9368601 -1.7538960 9.2752762 9.9958584 3.9184149 9.0597703 9.0930464 0.5679348 4.6035433 9.8808001 10.6353516 9.5537591 11.0647709 10.1377727 11.7311894 17.6839829 11.9039774 15.0033791 8.0124681 10.5127668 11.8159633 11.6916506 4.4939163 4.2232681 9.1811540 11.1109490 NA 11.8457857 5.0404059 5.3440224 4.2459900 10.2537172 11.4325676 10.3916029 12.6667388 12.7721215 8.7478261 10.8447395 10.6113875 11.2893582 11.6007894 5.3957346 11.6576325 11.7713875 -1.7538960 9.9971147 8.7567531 3.2006456 5.3012730 9.9010725 10.8144202 10.2927721 9.9950205 2.0533547 8.8110911 13.8605264 12.3522248 10.0129320 9.3681699 -0.00412210 0.88111000 0.88111000 0.00239060 0.00239060 0.00906390 0.00650160 0.00000000 -0.48741000 0.00725440 0.00725440 0.45687000 -0.00072958 -0.00072958 0.44600000 0.44600000 0.44600000 -0.00633440 -0.00633440 0.00600260 0.46148000 -0.00301510 -0.01557200 -0.01557200 -0.01557200 -0.00882030 -0.00882030 -0.00882030 -0.00675390 -0.00412210 -0.00412210 -0.00052195 0.00239060 0.00906390 0.00369380 -0.00251550 -0.00251550 0.01017800 -0.48741000 -0.48846000 -0.00421870 0.00086446 0.00725440 0.00308470 0.00308470 0.00308470 0.00308470 -0.00072958 0.01827600 0.44600000 0.44600000 -0.48005000 -0.48005000 -0.00633440 -0.00633440 -0.00633440 -0.00297060 0.43965000 -0.00301510 -0.49577000 -0.50295000 -0.01557200 0.00572450 -0.04966300 -0.00882030 0.00030978 0.49530000 -0.01323200 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.450 0.000 0.000 0.000 0.000 8.4903527 11.6849108 5.6553805 10.2866213 3.3752758 10.2603583 2.3334524 NA 8.4603080 7.7054209 1.2459824 7.3597311 1.9464314 10.0903025 9.4134073 1.2459824 9.0199523 9.3726936 11.5783054 10.1228897 10.0468323 8.3307972 10.4033360 2.7695602 9.3314616 10.1000783 5.6296947 NA 10.6688423 2.7054250 11.7364639 12.6788572 6.7577420 9.6585589 7.2459890 9.1293961 7.1528801 -0.1690957 -0.7538960 3.9464314 8.6648959 10.8419458 9.8110911 4.4554456 9.1778199 8.3701102 9.3810571 8.3187918 8.4008073 0.2459824 10.5721376 3.9464314 8.2074385 9.4026915 6.7156710 4.6553805 9.9223870 8.5531900 7.9840812 NA 13.0862261 NA 9.9546418 -1.7538960 8.6992598 5.9670879 7.7217226 9.0629727 14.0453699 5.5497708 8.4639469 13.1262900 10.4499488 10.9305186 13.3850607 12.3219695 8.5116040 10.9717813 13.2455928 11.2775180 9.1811540 8.7567531 0.8309854 6.9464291 12.2517890 11.196363 7.082039 8.913101 9.074919 8.324140 10.245073 6.701316 9.156632 11.397481 5.939476 3.830955 8.783207 6.181566 12.264537 10.512190 9.417560 9.151376 12.553403 6.217533 11.413032 9.553759 10.482900 10.934458 10.826248 10.689192 10.650332 8.759717 NA 8.991403 6.838446 11.845786 7.668054 10.717156 10.253717 7.785148 13.547307 9.621029 9.538311 13.190655 10.362333 9.581379 2.415921 TCGA-A2-A3XS 62 1 1032 NA breast stage iiia t1 n2a m0 female 2003 NA no infiltrating ductal carcinoma 9 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 9.5319958 8.1907457 11.2990351 8.5529553 8.6784864 8.5081275 9.4175312 10.3130646 12.1914546 12.6597242 11.1307539 10.1858743 3.7854041 12.6737098 1.9780492 10.4337162 5.1874986 8.5159119 9.1269468 6.5779590 NA 9.5939826 10.3311934 10.2388916 10.6718239 4.6025400 -1.6069133 8.8810950 11.1877030 2.9780492 8.8224908 5.8277123 0.9780492 4.4805495 9.2580440 9.8718537 9.1818025 9.6761724 9.7071008 11.0315199 3.0935264 12.0324248 15.0350934 8.0711910 10.4112808 10.6954374 10.0378416 5.2634476 0.7150147 8.6586992 9.6164825 0.7150147 9.5152650 5.3817679 6.1875005 4.8849349 8.3689320 11.7151530 10.3089634 10.9440713 11.9819158 8.2772544 11.0094032 10.6340662 10.0619691 10.1947924 4.5223697 11.2148580 10.0256249 NA 10.5988773 9.7042647 4.3657765 4.7681261 8.9657843 10.4140640 10.5129979 9.4950597 4.2757297 8.8939258 12.3032583 11.5393345 10.3778585 10.0288022 0.2956500 3.6569000 0.1140400 -0.2891000 0.3386900 -0.0092666 0.0130190 0.6907300 -0.1852100 -0.4553300 -0.4553300 1.8047000 1.2510000 -0.4760700 -0.2398500 -0.2398500 -0.2398500 0.2780500 -0.2614100 1.1139000 -0.2974500 0.4273800 -0.0047079 -0.0047079 -0.0047079 0.0068044 0.3530000 0.2817100 0.4493500 -0.5254200 0.2956500 -0.5736700 -0.2436300 -0.4942300 -0.5134200 -0.7681700 -0.7681700 -0.2617900 -0.1859700 0.0249690 -0.0276710 0.2100800 -0.4553300 0.3769300 0.4107800 -0.4449100 -0.4551100 -0.4760700 -0.6804000 -0.2537000 -0.2398500 0.2956500 -0.2807300 0.2780500 -0.2614100 -0.2593800 -0.0918160 -0.2974500 -0.5182500 0.0000000 -0.0047079 -0.0047079 0.1716600 0.0068044 0.2817100 0.3739700 -0.0018491 -0.2097300 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 0.000 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 0.000 9.0031862 13.4446754 4.3472830 9.7918277 4.1726075 12.0318593 5.5223665 6.9205613 9.3407209 6.6692082 6.6831027 7.4320031 3.8525183 9.7654050 9.6738548 5.7329339 8.7950302 11.1008745 6.8235367 9.9404606 8.6760336 6.9515050 11.2609419 2.5630117 9.1488063 9.9303024 5.0655077 NA 10.8634887 2.2999773 12.6871304 13.4598460 8.5667611 9.7262395 10.2448331 10.0165083 6.1678717 1.8525183 0.3930867 -1.6069133 9.1809867 10.2287397 7.5878413 6.5326349 10.2153044 8.3119472 10.3432755 6.1277942 9.9543720 4.7150147 11.7458172 2.6410142 5.3119463 9.5761300 6.9743974 5.9629400 9.6308916 8.0278949 7.6146708 9.6657138 13.5414017 2.2999773 11.2082672 -1.6069133 9.8606896 8.0637402 8.7626813 9.1645736 8.888179 9.376078 8.117598 12.673710 10.519466 11.072564 6.577959 11.441911 8.816652 10.570192 14.290646 11.402913 8.658699 8.488481 3.678489 7.781101 10.478556 10.5748575 5.6025371 8.8277123 9.5655115 8.5223669 9.6680737 7.7615905 7.7637714 11.1307539 9.8969098 3.1479742 10.9483921 9.3579447 12.0192494 9.8566084 7.5655119 9.8209207 7.3355985 6.4320023 11.1231657 9.1818025 10.1976185 10.1874999 12.2164513 11.6806522 10.0169655 7.6831027 4.3472830 9.5365501 7.5197888 9.5152650 5.3588674 10.9055875 8.3689320 7.4494508 14.3512742 9.8794163 10.1801704 12.4157986 11.6507665 8.9827352 0.9780492 TCGA-A2-A3XT 45 0 NA 2770 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-06 4.855162e-07 8.9679965 8.2976371 11.0128331 9.2167830 9.1349586 8.6426272 8.4370042 9.1125909 12.1293031 11.2906118 8.6512146 9.3644405 0.8395565 10.3944810 3.0094905 9.9327699 7.0555102 7.5284057 10.1311268 2.2546243 0.2545940 10.0867088 8.0211388 9.5170806 9.8752880 4.6639992 2.4245459 12.6832416 11.3420727 2.0619490 9.4906241 7.7683372 NA 4.0359669 8.7771915 8.6798260 8.3979933 9.3447222 9.7369136 10.4885291 -1.7451641 8.4469026 14.0579843 8.8947193 10.6184654 10.1801644 9.4610138 3.3420711 -0.7454060 8.6372338 10.2211153 0.8395565 9.9020683 5.7859925 6.7262849 5.8912345 8.4220282 11.9262615 9.8596264 11.1693687 12.0614616 9.4018148 10.0498379 9.6397442 10.9831682 11.3088750 4.4444352 11.7399361 10.4232820 1.4245459 10.7132728 9.9778442 4.0920467 5.1734713 11.4295356 9.3186791 11.5713157 10.2211153 0.8395565 5.1125917 12.7711718 11.6948302 8.8367520 9.3473671 0.653620 1.038000 1.338100 0.000000 0.243330 0.124080 -0.474230 -0.082826 0.450100 1.006800 1.006800 1.236700 0.628140 -0.450350 0.185620 0.185620 0.185620 0.399180 0.093971 0.184070 -0.148570 0.324210 -0.452180 -0.452180 0.514370 0.128950 -0.446590 -0.472640 0.135750 -0.045359 0.653620 -0.651420 0.000000 -0.444110 -0.430030 -0.447880 -0.447880 -0.082826 0.450100 0.546900 0.106200 0.095509 -0.330700 1.166000 -0.079687 -0.079687 -0.455710 -0.450350 -0.450350 -0.396040 0.185620 0.185620 -0.764890 -1.067800 0.093971 0.093971 -0.504180 -0.148570 0.311200 -0.754230 -0.452180 -0.452180 0.107220 -0.370490 -0.446590 0.135750 0.118500 0.791180 0.120 -0.450 0.114 0.114 -0.253 -0.253 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 -0.106 0.120 -0.450 0.114 0.114 -0.253 -0.253 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 -0.106 9.230458 12.371279 1.424546 10.455508 4.612164 11.075387 3.680876 -0.745406 9.210260 7.149428 NA 6.493015 1.955052 11.155477 9.720176 4.112592 7.799574 11.362971 6.680874 10.455815 8.593469 6.439485 10.910811 2.161501 8.911928 10.175335 3.424532 -1.745164 11.558819 5.714042 13.687641 12.294557 6.185347 9.629649 9.229741 9.850800 1.254594 4.061966 0.254594 -0.745406 9.560102 10.156608 8.330089 3.299010 11.668047 8.007827 9.995234 3.383898 11.039245 4.087497 12.955808 3.680876 4.778172 9.738743 8.858672 4.576540 9.206623 9.021139 7.399269 0.254594 13.511519 -0.745406 10.144494 -0.745406 10.534511 3.383898 7.594460 8.164503 8.860201 7.296269 9.050649 10.394481 9.339418 12.680350 2.254624 10.740691 8.486539 10.279057 12.475970 12.590000 8.637234 9.152455 4.424532 8.044144 11.435296 10.1719820 5.6383143 8.7564472 7.7722796 8.6415500 9.5357112 7.3314258 5.7937685 8.6512146 11.1945564 2.0619490 4.2769805 9.7887960 11.5305889 11.1218886 8.6756226 9.0474002 8.5595316 5.9056614 10.6885187 8.3979933 10.6358824 11.1505638 11.9912232 11.7885480 10.1868246 8.7089094 NA 9.7771914 6.0490252 9.9020683 5.6975542 11.2701992 8.4220282 8.6353307 14.9230794 10.9912232 10.9380432 11.8423874 10.6782511 8.5376983 0.5765705 TCGA-A2-A3XU 35 1 912 NA breast stage iib t2 n1mi m0 female 2006 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 3 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4.855162e-07 1.733986e-07 7.9632493 8.6044424 11.0136775 4.7537971 9.2064611 8.6349998 9.7702764 9.6907801 11.3460330 12.3163750 9.7643651 9.5281952 3.0586455 11.6546626 0.6663021 9.4920867 8.0216840 9.1711520 6.5489760 3.9882575 -0.3336979 12.0861615 3.0586455 10.3568461 11.0973081 3.6663362 NA 6.9095067 10.2620567 3.7107238 10.3422901 5.2361903 NA 5.5366964 8.1481323 9.2161177 9.1800606 8.2883849 7.8999526 9.3466926 NA 6.1898957 12.6217104 6.9416662 11.0033973 9.6810509 9.0554264 3.9882575 0.6663021 7.4245560 10.3878594 NA 11.4825167 1.8362473 1.4736830 4.9701128 6.0238852 12.2088812 12.4555609 10.2961449 11.5245083 8.9735338 10.1056444 9.8635496 9.1206324 8.8806522 0.2513252 10.6252481 7.1339385 NA 9.6747616 9.7865709 0.2513252 1.4736830 12.0463881 8.9701137 10.0645422 9.2006358 4.8160825 4.8757850 11.7678163 11.1445970 9.3281110 9.3119914 0.6688900 1.7720000 1.7720000 0.0087689 -0.0184350 -0.0815510 1.0979000 -0.0298020 -0.0298020 -0.8747800 3.6569000 2.4820000 0.0163470 0.0728850 0.0369920 0.0369920 0.0369920 0.0053310 0.0053310 -0.0321220 -0.8821700 -0.8415100 0.1284500 0.1284500 0.1284500 0.1326400 0.1326400 0.1326400 -0.8195500 -0.7782600 -0.9087800 -0.0360740 0.0784970 -0.0160980 -0.0815510 0.5007100 0.5007100 -0.0298020 -0.0298020 0.0013041 -0.0005067 -0.0170610 -0.8979100 0.0471830 0.0471830 0.0471830 0.0471830 0.0291870 -0.8471200 0.0369920 0.0369920 0.0000000 0.0000000 0.0053310 0.0053310 0.0053310 -0.8819800 -0.8821700 -0.8278600 -0.0926890 0.1284500 0.1284500 -0.2757800 0.1326400 0.1326400 -0.8382200 0.9154900 0.2718100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.133 0.133 -0.846 0.926 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.056 0.524 0.000 0.000 0.000 0.000 -0.867 2.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.133 0.133 -0.846 0.926 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.056 0.524 0.000 0.000 0.000 0.000 -0.867 2.411 0.000 0.000 0.000 0.000 5.0757251 12.5974398 5.0925965 7.1898947 1.4736830 10.1982018 NA -0.3336979 9.9927625 5.2662468 8.0194795 9.3624311 7.5672001 11.2477689 9.5619082 1.2513252 3.3101947 8.0693450 3.9142583 10.7035367 8.7381842 5.2361903 11.4509678 NA 10.7790982 9.9272525 4.2810454 NA 10.2750498 2.5732291 14.1880561 11.9481181 5.5366964 8.9071244 6.9284284 10.3545833 0.2513252 1.6663476 -1.3335161 0.6663021 9.9331195 10.9363362 5.0061813 1.2513252 9.8891761 10.6733602 10.8055645 3.8362574 9.6719575 0.9882666 11.4748950 NA 2.6663249 10.1516743 8.4398018 4.5489791 8.4897003 5.3387596 7.9237209 6.5792224 14.9432389 -1.3335161 11.6843592 NA 9.4086425 4.0586542 7.7243249 6.9284284 11.266824 9.013954 8.140039 11.654663 9.590403 12.795535 3.988257 7.084185 8.781181 9.725677 13.983675 14.148952 7.424556 9.191854 4.023885 7.870904 8.623435 10.206945 2.125750 7.277358 9.470464 8.528970 8.926688 5.058650 6.075723 9.764365 11.452398 8.273663 4.220918 9.046112 9.511039 10.313342 7.724325 11.411167 1.666348 4.732421 10.234289 9.180061 9.992201 10.869681 10.765023 11.600577 10.355457 7.010629 NA 9.429628 5.561152 11.482517 3.573229 11.762981 6.023885 7.366772 14.463133 10.448922 10.323651 11.991498 11.567766 9.068279 7.454235 TCGA-A2-A3XV 46 0 NA 996 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 2 NA NA 2 6 1 2 5 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.080784e-07 8.0727881 8.1534568 9.7614798 4.4266271 10.2257128 8.2360400 8.9261525 9.0055642 10.1114443 13.3566531 9.0067710 9.8086010 1.5901469 15.2270401 9.2564750 10.3516755 8.9861174 7.5140883 2.8702266 11.9517547 NA 10.0894007 NA 10.3926544 10.5731178 10.4202999 4.6156576 8.5376568 10.8751961 -1.2172560 7.0542320 5.7369647 NA 7.3141509 8.8448153 8.9030072 8.0163888 8.5140883 7.6745532 9.0876909 7.4374050 8.1772321 13.2517115 2.7295093 9.4727672 8.6546747 9.0460386 3.7827650 3.7369620 6.6282589 10.5538460 0.3677065 10.0079767 3.3063352 3.7827650 4.2746195 8.6577507 11.4536468 10.5347317 11.1281745 11.4423193 6.5509530 10.0831219 9.4944362 9.1534568 8.9133397 NA 12.0513113 8.3900997 NA 9.6148681 7.7252838 1.5901469 1.1046721 10.0652785 8.7340542 10.4338210 8.2215610 1.7827860 8.9750621 11.9779877 12.0983434 8.6851444 8.7742913 -1.8014e-03 -1.8014e-03 2.4689e-02 9.2892e-04 1.6286e-02 1.4190e-02 1.0982e-02 6.4564e-01 -6.6798e-01 -1.4455e-03 -1.4455e-03 -1.3127e-02 -8.7146e-03 -8.7146e-03 -5.5375e-03 -2.0824e-02 -2.0824e-02 -1.5243e-03 5.4247e-03 9.3098e-03 -3.3243e-03 -2.1784e-02 -6.9622e-01 1.5920e+00 5.8901e-01 -7.1338e-02 -7.1338e-02 -7.1338e-02 -4.9262e-02 -5.3739e-02 -1.8014e-03 8.4743e-03 2.9133e-03 1.4190e-02 1.4190e-02 1.0982e-02 1.0982e-02 6.4564e-01 9.8706e-02 -6.9323e-01 4.5225e-05 4.0243e-03 -1.0158e-02 -6.6669e-01 -6.5715e-01 6.3134e-01 6.0573e-01 -8.7146e-03 -8.7146e-03 -5.5375e-03 -2.0824e-02 -1.8014e-03 -1.8014e-03 -1.5243e-03 5.4247e-03 5.4247e-03 7.1814e-03 -3.3243e-03 -2.1784e-02 -3.2314e-02 -6.9622e-01 5.8901e-01 0.0000e+00 -7.1338e-02 -7.1338e-02 -2.6441e-02 -1.3953e-02 -5.9135e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 0.000 7.5575564 11.8898228 3.7827650 8.0306969 0.3677065 10.6945358 3.0306892 NA 10.0001212 7.3863954 NA 5.6654127 3.0306892 10.7643365 9.4797368 1.1046721 5.7252831 7.9799859 11.3634989 14.9129175 10.1320394 5.7016322 10.3267678 -0.2172560 8.0933822 9.8002737 9.2329495 NA 10.1836488 1.5901469 14.1323270 13.0888310 7.4516546 8.9451605 7.8106751 10.9967848 2.2422061 2.4832096 NA 2.1047057 10.6368585 12.8378822 9.1889743 2.2422061 8.1931784 11.3905619 9.5409924 6.8595845 10.2701069 -1.2172560 10.1921603 NA 3.6407482 10.2177102 8.4890752 1.1046721 8.1447133 8.3199877 4.5106898 4.6654098 14.9011426 -0.2172560 11.7300409 NA 6.8106757 5.6282603 7.6926622 8.0259435 11.593140 7.537657 9.639973 15.227040 10.555496 11.926471 11.951755 8.244249 8.231918 9.140321 12.077103 10.533476 6.628259 8.423014 NA 8.373356 7.924877 10.0704816 3.9922246 8.5690387 7.1403216 8.8244283 9.5889563 5.3063315 8.5869002 9.0067710 10.2339804 0.7827440 5.8808006 7.9083896 6.8965116 10.7586172 8.0023008 12.2280429 1.7827860 4.6156576 9.9264204 8.0163888 10.1616059 10.6843904 7.4587265 9.2615388 10.4297779 5.8595845 NA 10.0184844 2.1047057 10.0079767 5.8702315 10.7866385 8.6577507 7.7589900 15.3820138 10.8312562 10.5455666 12.4691604 10.4740766 9.1359160 0.3677065 TCGA-A2-A3XW 42 0 NA 1712 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 2 6 NA NA 2 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 1.040392e-07 8.43991979 8.37210456 10.83867237 6.80706249 9.05978815 8.23460095 10.87913598 9.21494901 11.89237554 13.46690062 10.10505285 10.32505603 2.31063096 13.28740560 1.08827731 10.27848070 7.02684431 9.08165466 11.14307493 10.91981565 NA 13.22518223 8.60788065 10.68879240 10.78056938 4.80706120 0.08827731 10.40641071 9.06170277 3.50328512 8.77474490 7.42214552 0.82521576 3.50328512 8.96986825 8.61702403 8.96271356 9.92587247 7.94207401 9.80934370 -0.49675305 8.97495715 14.63473710 6.21484558 11.17504418 9.84646777 9.43771005 4.96271558 7.31706343 6.78405242 10.77562016 -1.49654949 10.03271263 4.63256487 4.56936957 3.50328512 8.24643327 11.25796080 10.57071641 10.38439599 11.38133291 8.99212629 10.12533378 9.87287938 9.43844714 10.79675364 3.67320588 10.01947453 9.01404614 2.31063096 11.03904337 8.27477136 4.21588047 5.04244298 10.89156842 8.36126305 10.21408849 7.72245031 6.80706249 10.64251359 13.33012839 12.90975278 9.89129933 10.48556258 0.00041593 0.00041593 -0.00318590 -0.00083160 -0.00083160 0.00346870 0.02468900 0.26279000 -0.11926000 0.00130200 0.00130200 0.00097064 -0.00484610 -0.00484610 -0.05632100 0.00305220 -0.11254000 0.11125000 0.11125000 -0.12148000 -0.07013500 0.01279500 -0.10590000 -0.00470790 -0.00470790 0.00471900 0.00471900 0.00471900 0.09463700 0.00041593 0.00041593 -0.00054926 -0.00083160 0.00346870 0.00346870 0.00265910 0.01014600 -0.10618000 -0.11926000 -0.11926000 0.11561000 0.02189800 0.03651200 -0.00286070 -0.00286070 -0.00286070 -0.00286070 -0.00484610 -0.00484610 -0.05632100 0.00305220 -0.11254000 -0.11254000 0.11125000 0.11125000 0.11125000 -0.11900000 -0.10605000 0.01279500 0.00263570 -0.10590000 -0.00470790 -0.00235530 0.00471900 0.00471900 -0.00816240 0.12108000 -0.00277070 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.41242504 12.99507248 2.41017826 10.10365958 3.45747610 10.31545936 2.41017826 3.78868571 9.65810006 13.06784834 3.59074572 6.36746892 6.63770877 9.66189173 9.79962469 3.08824338 8.52148227 8.48199232 9.22779594 11.25210380 9.47968145 6.48056242 11.18078147 2.96271558 7.34248541 10.81133656 7.44872589 NA 11.36048549 2.82521576 13.66543728 12.42084056 7.54494126 9.30013288 10.44249393 10.18978256 2.67321719 NA 0.50324695 6.81616448 9.49338595 11.04219842 7.31063732 5.07313899 7.99789754 10.06790783 10.33498507 5.39810064 9.64921414 NA 12.74987418 3.89560315 5.91267381 8.98329463 6.70305224 0.82521576 9.75417249 8.13809308 9.29200038 15.10079631 14.53105845 0.08827731 11.68101298 NA 8.73450336 5.27146676 7.31706343 9.10876149 13.307030 5.323460 7.520091 13.287406 10.014541 10.285871 10.919816 10.922452 8.902325 10.017996 12.267221 13.444742 6.784052 7.739296 1.088277 6.865226 9.671954 10.89291335 3.92954485 8.54357167 9.55517061 6.96680650 10.11382706 8.13445918 9.44945717 10.10505285 7.77006852 3.67320588 7.85422136 7.99343095 10.08306933 10.49904920 8.15970688 11.27456510 6.98709799 7.54220077 11.76282670 8.96271356 11.98760144 10.39809979 9.38974081 11.70525274 10.53118805 6.60131470 0.08827731 9.75881816 3.99513172 10.03271263 3.31063096 12.13035984 8.24643327 6.99913751 14.17249927 10.53842477 9.88590605 12.40414882 11.18737311 9.01700964 -1.49654949 TCGA-A2-A3XX 49 1 1439 1168 breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 9.079939 8.354501 11.576353 7.960955 8.900159 7.926819 10.316618 10.551529 12.591814 14.334200 10.561707 10.650824 6.812696 12.855556 2.455150 9.108885 6.654816 8.974780 9.983109 5.803873 NA 6.821465 9.303767 10.213442 10.355633 5.740547 -1.544982 9.276918 11.037050 2.978708 10.064322 6.141643 -1.544982 5.821465 9.055986 9.364287 9.379214 9.044795 9.179658 10.850678 4.409343 7.801657 15.929499 6.761615 10.735914 10.701291 10.156883 3.703067 7.688764 8.080853 9.586358 NA 9.926311 5.615016 6.183064 4.542605 9.235684 11.929357 9.862412 10.013086 12.268223 9.803872 10.979685 10.747750 10.313513 10.856557 4.432425 10.887686 12.093919 2.262493 10.512459 10.570838 4.703450 5.374007 12.029382 9.379956 10.466021 9.846387 3.914574 8.950999 12.890423 12.053894 10.405700 9.886641 0.7260300 1.5118000 1.4902000 -0.2786700 -0.2480200 -0.0012473 0.6053900 0.5147200 0.2501200 -0.3807800 2.3814000 2.2828000 0.1498500 0.0813220 -0.2834600 -0.2834600 -0.2526100 -0.2630000 -0.2755500 -0.2761800 -0.2896400 -0.2806100 0.1051200 0.1064300 0.1064300 -0.2705700 0.4527800 -0.7012700 0.4864700 0.0000000 0.0043027 0.0874580 -0.2786700 -0.0284420 -0.0294060 -0.3063300 -0.3063300 0.5143800 0.2501200 0.2501200 -0.0094630 0.1165300 -0.0120240 -0.2964600 -0.2964600 -0.2964600 -0.2964600 0.0813220 0.0813220 -0.2834600 -0.2834600 -0.2537900 -0.2537900 -0.2630000 -0.2755500 -0.3032200 -0.2572100 -0.2896400 -0.2806100 0.4321100 0.1051200 0.1064300 0.4116100 -0.2705700 -0.0899640 0.0639020 0.5192600 -0.0101750 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 0.296 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 0.296 8.2166949 12.9685012 3.7770725 10.2166949 3.9787082 13.5516530 4.7770725 4.8814101 8.9599628 7.7101721 9.0010735 7.9660463 3.3620350 10.9482486 9.4223699 3.8814101 6.9943025 10.7419902 8.9549896 10.1932359 9.3861397 5.4324250 11.7128262 2.0401209 9.1932361 10.5252646 4.9145741 NA 11.2458995 3.4551496 12.1342939 13.5006474 7.9125247 9.6010758 9.7411238 11.5687231 1.9145645 1.7770725 NA -0.5447714 9.2982796 9.5818481 6.1762430 3.8474658 10.2139749 9.3567649 10.1594797 5.3499632 12.1108980 7.4324233 12.1260212 3.3131297 4.0698568 9.5830284 7.2962995 7.4005875 9.0447949 7.4858108 9.8060830 11.7937408 13.2666188 3.4995398 11.5810415 0.4551233 9.1284527 8.6572677 8.3454079 8.3590256 8.954501 8.134624 8.562361 12.855556 9.290405 11.857223 5.803873 10.656349 8.831269 9.729522 13.353273 12.820509 8.080853 8.535961 6.313124 7.868772 11.223535 10.6727985 5.2365041 8.4266874 9.2405963 9.1873112 9.9704000 7.3469276 6.6498999 10.5617067 6.7266065 0.4551233 9.7341739 10.2505462 11.9624429 9.3888344 8.1381381 9.1813620 6.4775122 7.2397789 10.3385201 9.3792139 9.9634337 10.3339610 12.1647661 12.4655844 10.4252496 7.8038722 NA 9.9077402 9.0363443 9.9263108 5.9145765 10.7598230 9.2356835 7.5870004 13.4351940 10.5165149 9.8840273 12.2759210 11.5943753 8.9698579 2.0401209 TCGA-A2-A3XY 49 1 1093 1064 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 2 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.81477e-07 9.1420606 9.0310023 11.6654471 8.6157227 8.3425832 8.8747171 10.3419981 10.4335521 12.1116583 12.7522357 10.8862016 10.3758366 2.3965431 12.0231759 2.0746424 11.1292305 4.2039059 8.5330330 11.9883571 5.9994386 -0.3404407 7.7346222 8.6708159 9.5326022 10.6555914 4.8295147 0.8819778 9.3571354 10.5709807 2.7184822 9.2344975 7.1434046 NA 4.2840773 9.5724780 9.7785297 8.7845717 9.1380214 9.1142306 10.6023476 1.8819778 6.6137850 15.5525742 8.6693985 10.2962073 10.5188647 9.8559860 4.0288255 -1.9252206 11.3327505 11.4228011 -1.9252206 9.8678231 5.9449919 7.1380209 5.5422333 9.8617126 11.4885185 10.1288914 11.5876135 12.4088995 7.6330468 11.4554931 10.5833940 10.7263507 11.1649040 4.8025448 12.2860582 11.3831074 3.7470543 11.1154296 10.3657968 4.6935985 5.5744709 9.3823962 9.6406802 10.6701168 9.3588720 5.8884072 9.7910170 13.6425526 12.4173954 9.9660302 10.3812575 0.00000000 0.69746000 -0.04346600 -0.07107100 3.65690000 -0.08359800 0.16610000 0.23923000 0.23923000 -0.42844000 -0.42844000 1.15710000 0.07282700 0.07282700 -0.01230000 -0.01230000 -0.01230000 -0.03952900 -0.03952900 -0.03163200 0.01307400 0.10351000 -0.16548000 -0.16548000 -0.16548000 0.04897200 3.65690000 0.05337900 1.65530000 0.00000000 0.00000000 0.05473000 -0.07107100 -0.08359800 -0.02412000 -0.23815000 -0.19087000 0.23923000 0.23923000 0.23923000 -0.05388100 -0.05388100 -0.48899000 -0.17069000 -0.17069000 -0.17069000 -0.17069000 0.07282700 0.18117000 -0.01230000 -0.01230000 -0.01230000 -0.01230000 -0.03952900 -0.25114000 -0.25114000 -0.03163200 0.01740400 0.10351000 0.08710000 -0.16548000 -0.16548000 0.20457000 0.04897200 0.00010027 0.02890300 0.31883000 -0.52061000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.203 0.088 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.203 0.088 9.22564271 15.37959242 4.07462531 10.58192533 4.93260926 12.54484020 6.15677480 5.57447092 8.91933204 8.91461714 5.50925562 8.93619387 8.25204565 10.50010441 9.88238368 3.82951472 9.40217877 11.19810103 8.87552606 9.42390734 8.84911669 6.15677480 12.64204759 1.53406160 9.12515513 10.72859086 5.62152151 NA 11.00942276 1.53406160 13.20350663 12.55497465 7.71306202 9.74970119 11.16556560 9.90909728 2.93260926 3.02881665 -1.92522057 0.07464244 8.86660296 9.96527045 6.84941386 5.58242052 8.82072912 7.70398314 9.91382992 5.80254738 11.03625674 5.60600687 12.76156436 4.18315300 5.19356676 9.21317325 7.61415327 6.62921526 10.17331635 8.67917957 8.08725066 5.98151705 13.43783699 0.65955927 11.28757849 1.77505054 9.16738327 5.08585376 7.36924661 8.42777292 12.126410 10.554659 8.633047 12.023176 9.843638 10.228811 5.999439 8.975493 9.049837 10.615933 13.490698 11.823867 11.332751 7.691175 1.981524 7.598188 11.556552 11.5091241 3.8025448 8.4189219 9.6035687 8.0576198 10.2128436 8.2064830 7.9603223 10.8862016 9.6045447 4.1831530 8.3897759 8.7607416 12.8193024 10.3875091 8.3692470 9.1594347 8.6263344 7.5340577 10.9940035 8.7845717 10.3166093 10.5154953 11.5645996 12.2879583 10.2398473 8.9897586 0.3965979 10.3735250 7.7974339 9.8678231 6.7148706 11.0108960 9.8617126 7.3461591 13.9236892 10.3666602 10.5260949 12.4759724 11.3945805 8.9263752 2.6595821 TCGA-A2-A3XZ 46 0 NA 1532 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 4 NA NA 2 4 2 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 9.2950514 8.9756929 10.9835712 8.5209443 9.5004993 9.7797996 9.2855234 10.7675890 10.2157513 13.4400982 10.5035847 10.6610905 1.4629423 17.6384161 1.6328731 9.0831724 7.0479146 8.0628654 6.4797609 12.6075311 -0.5370054 11.9007046 5.1068089 9.5893085 9.6736239 6.9305576 3.2178356 10.8616962 10.9645409 1.6328731 8.0886616 7.0479146 -1.5370054 4.2703047 9.6114291 9.6133344 8.9234083 9.8166507 9.6570937 10.8420600 9.5209441 8.6114291 14.4058793 8.4359036 10.3452096 9.9801297 10.1655581 5.1494545 5.8723437 7.7506648 10.5172176 NA 10.2966333 5.2178395 6.9386857 5.1494545 9.5609845 11.9145500 10.6322512 10.8630314 12.8850830 7.8996639 10.6187194 10.1441909 10.8116806 10.3739699 5.5609839 11.0263871 10.3017624 -1.5370054 10.2303093 8.7712914 3.7131569 5.6821210 10.3228755 9.9437426 11.4842795 8.8702201 3.3209323 9.7495103 12.8165818 11.5532303 9.7114731 10.3509347 0.25230000 0.49787000 0.49787000 -0.00249380 -0.00249380 0.00485790 0.50632000 -0.00166290 -0.00787140 -0.16688000 -0.16688000 -0.00166290 0.00750000 0.00750000 -0.05023500 -0.05023500 -0.05023500 0.00777830 -0.00041585 -0.00484610 -0.00290910 0.00000000 -0.16675000 3.65690000 3.65690000 -0.22810000 0.00471900 0.00471900 0.00221930 -0.24952000 -0.27129000 -0.26035000 -0.00249380 0.00485790 0.26388000 -0.01133500 -0.01133500 -0.00166290 -0.00544560 -0.00387790 0.25140000 0.25699000 -0.26901000 -0.00557300 -0.00557300 0.00000000 0.00000000 0.00750000 0.00750000 0.00277450 -0.05023500 -0.05023500 -0.05023500 -0.00418090 -0.00041585 -0.00041585 0.00069327 -0.00290910 0.00000000 0.01042400 -0.16675000 -0.01285100 -0.00167810 -0.22810000 0.00471900 0.00221930 -0.01102100 -0.13510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.167 -0.167 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.167 -0.167 0.000 0.000 0.000 0.000 10.4240404 12.0097264 6.4054666 9.5838383 6.7660942 12.7243863 7.7575734 1.0478873 9.8428723 7.6253436 NA 6.8160992 2.7848808 10.4880921 9.2352671 3.6724027 8.5004993 9.7792339 8.7758354 10.2224246 10.0107242 6.7344156 9.8536589 3.3209323 9.1282885 9.9766801 5.0628643 -1.5370054 13.9815134 5.3455951 12.3546413 13.4583663 6.9627989 9.2799360 8.2573685 10.2056829 5.4171504 2.2703196 -1.5370054 2.0479222 8.7297390 9.8970595 9.6234543 3.4629554 10.1136363 8.3068737 9.8531214 4.9223834 10.3459776 -1.5370054 9.4664703 4.1908756 3.9548012 10.0034244 6.5576107 7.9038216 9.8248962 8.2990028 10.7678742 -0.5370054 13.7061265 -0.5370054 11.1276220 NA 8.7814955 3.7848808 8.2751300 8.8444955 11.835903 7.861696 8.704936 17.638416 10.198932 11.089118 12.607531 8.596095 9.159607 10.044153 13.693911 9.504612 7.750665 7.632877 3.922388 10.955056 11.030671 11.3450223 4.8028033 8.9786524 9.4395166 8.1754797 11.2230715 9.0394367 9.2686964 10.5035847 6.9141639 1.9223882 10.1229483 7.9612830 12.2543189 10.6237693 7.8227021 10.0817968 8.0977635 8.5344149 10.9286541 8.9234083 10.4626002 10.5678788 10.8227020 10.5192515 10.5844860 7.9079674 0.4629946 9.7374297 9.3840496 10.2966333 4.3209323 11.2321705 9.5609845 7.0886611 13.4784982 9.5870737 9.7792339 12.2261648 10.9751991 9.7191612 2.9223882 TCGA-A2-A3Y0 57 0 NA 1546 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 0 0 0 0 0 4.161568e-06 1.24847e-06 9.03898043 7.12124236 11.26945528 6.84040532 9.01628905 9.23724319 10.06397838 10.29192351 12.53119378 13.34287525 11.09657681 10.72255781 2.39333382 11.22046624 -0.02165791 9.17057732 6.61732346 8.26214466 7.82168216 6.02994754 -1.60647397 10.96127814 7.89515900 9.46814585 9.72199700 6.53287329 4.09376298 10.52999288 11.92567801 1.20069267 8.23094990 6.76836167 NA 4.62213970 8.89814092 10.15528881 9.03447078 9.54497293 8.62694173 10.21469748 1.20069267 9.67698930 14.34792736 7.84990233 10.40454586 9.64776025 9.36126875 2.30021160 -1.60647397 7.76400970 9.58067407 -0.60669364 7.74646864 4.03718013 8.49003736 5.83626501 7.52774832 12.05776938 10.46980368 11.08593759 12.11879485 6.32995954 10.80536260 9.97263795 11.04885281 10.43498125 2.20069267 11.63277142 8.31367486 1.39330636 10.03447064 9.44044605 4.54449157 4.20067697 9.59238098 10.10369800 10.52163871 8.38484374 1.71523446 10.25712120 12.16078238 12.64421263 9.19260376 10.33436972 0.256830 0.256830 -0.113810 0.018943 0.015727 0.129710 -0.116390 0.404440 -0.058058 -0.407050 0.949360 1.232800 0.567560 0.083487 -0.391960 0.155620 -0.388280 0.480450 0.202890 0.620790 -0.383690 -0.250790 -0.239960 -0.239960 -0.239960 0.168950 0.218370 0.218370 0.073115 -0.165610 0.256830 0.190560 0.024408 -0.421780 0.095653 -0.412230 -0.628930 0.404440 -0.058058 -0.015054 -0.111870 0.531860 0.030732 -0.362380 -0.464190 0.311610 -0.267330 -0.871270 -0.090361 -0.391960 -0.375720 -0.321000 -0.321000 0.480450 -0.382590 -0.407880 -0.662440 -0.383690 -0.250790 0.047552 -0.239960 -0.239960 0.031859 -0.382800 0.218370 0.224220 -0.645460 -0.238020 0.000 0.000 -0.321 -0.321 -0.383 -0.383 -0.702 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 0.506 0.885 0.000 0.000 0.000 -0.114 0.000 0.000 -0.321 -0.321 -0.383 -0.383 -0.702 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 0.506 0.885 0.000 0.000 0.000 -0.114 8.2293726 12.5251790 5.6027746 8.0989543 -0.2731688 11.1970496 2.4807821 1.7152345 10.6688646 10.2474112 2.4807821 6.0226785 6.2325265 11.1036981 10.3876755 5.4045489 3.6412454 8.9941642 7.4701374 10.9346608 9.5841406 6.5831460 11.7093207 1.6563591 8.0728020 10.5421164 1.7152345 NA 9.9867133 0.3933064 13.2673428 12.8583145 6.4966093 9.4411276 10.6682825 10.7337286 5.2006770 2.7152564 -1.6064740 -0.6066936 9.2904113 10.4486045 6.5226051 0.9782689 10.4080435 10.6006415 10.0907240 3.6412454 9.4627718 2.3933338 11.6415462 3.9479092 4.4156911 10.2871128 8.5922459 6.1812238 9.6364961 7.7618284 8.5669993 14.2965449 14.3576178 -0.6066936 11.3574824 NA 9.4253678 3.3002116 6.9555651 7.6554169 10.412548 10.237636 8.262145 11.220466 10.553193 10.857868 6.029948 8.309202 8.229373 10.260601 12.478712 11.684493 7.764010 6.664786 4.065745 8.071042 10.520994 10.634411 4.393320 9.118688 8.455368 8.467464 9.645721 7.657765 5.733173 11.096577 11.845306 NA 7.985779 9.779632 10.610371 10.817226 8.360548 11.080041 5.669446 6.789927 9.682920 9.034471 10.385552 10.227398 10.009871 10.124641 10.226608 7.327013 NA 10.280569 7.429495 7.746469 4.733170 10.696001 7.527748 8.235672 14.654995 10.932238 10.398596 12.419673 11.745366 8.684493 1.563256 TCGA-A2-A4RW 49 0 NA 222 breast stage iiic t2 n3a m0 female 2011 NA NA infiltrating lobular carcinoma 27 white not hispanic or latino NA NA 4 6 NA NA 1 4 3 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.318999e-06 5.867347e-07 10.0951671 9.2005988 10.8914159 9.1630070 7.6978509 9.0815303 10.4742314 9.3986144 11.0485132 9.0555056 10.9753588 10.2299826 0.8607642 13.3737361 3.6681078 10.5588747 5.5795664 8.1523031 7.7145780 12.3774338 1.2757818 14.1258266 5.4050700 9.2297645 10.6761321 8.9304225 1.2757818 9.4381776 10.1204920 4.5611856 9.9033202 6.7515200 NA 3.4457135 9.9968855 10.5052060 8.9322112 10.3875741 10.1916657 10.6681037 1.2757818 11.0398285 15.1770539 8.2199129 11.8962352 10.5858310 11.1271450 5.5795664 7.5611886 9.1306547 10.6729261 0.8607642 9.6200821 6.8380290 6.2065241 5.6851777 9.8226808 11.6554354 10.6519117 12.0260746 12.5705506 8.6333382 11.0290031 10.4421503 11.4717736 10.7741370 4.7993464 11.1515357 12.6029179 1.2757818 10.2630504 8.8110616 4.4867980 4.8607493 10.4723885 9.4985812 9.9313171 9.5738488 2.7352189 8.5308148 13.5020480 12.8748855 10.3921303 9.6978511 0.00360760 0.51542000 1.03000000 0.01070300 0.01498900 0.00889200 0.47753000 0.98991000 0.01028500 -0.52502000 0.00694350 0.49459000 0.54101000 0.01126100 0.01084200 0.01084200 0.52801000 -0.00292170 0.00597000 -0.51424000 -0.00761010 2.35870000 -0.00968060 -0.00968060 0.00597000 -0.01477800 -0.01477800 -0.01477800 0.00930980 -0.51774000 0.50950000 -0.00097017 -0.52317000 -0.51918000 -0.38123000 -0.53399000 -0.53399000 -0.53124000 0.01028500 -0.51177000 0.53977000 -0.50639000 -0.52502000 0.00000000 0.00000000 0.00000000 0.00000000 -0.98449000 -0.48313000 -0.52348000 0.01084200 -0.52164000 -0.52164000 -0.00292170 0.00861350 0.00861350 -0.52409000 -0.00761010 -0.53525000 0.01586600 -0.52675000 0.00597000 0.01768400 -0.01477800 -0.01477800 0.00930980 0.00708260 -0.51053000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 9.3960242 14.1058063 6.9339975 10.9160313 4.4457135 12.0985563 4.9196404 NA 8.9622867 10.0563261 1.2757818 9.5371644 3.7352189 9.8120335 9.9437848 6.0959645 9.1007451 9.6936389 9.0406580 9.3201805 9.7314731 7.9762261 10.7192480 2.7352189 6.7596019 10.5571368 5.2530665 0.2758414 11.1920390 3.9196452 11.5492906 12.1187259 8.6245144 10.1599568 8.4656109 9.6616488 7.0037068 -0.7242777 1.2757818 1.2757818 8.9464425 9.5343523 10.3908300 4.9762261 8.7823319 7.1149906 9.6519117 6.2065241 8.8812657 -0.7242777 11.1534539 3.9196452 5.5795664 9.5533294 5.2392605 4.8904953 9.3269952 7.9268380 7.6809277 4.0831453 13.1654804 0.2758414 10.1368732 NA 5.6156370 5.3843123 8.0571459 7.7796123 11.906270 6.597714 8.438178 13.373736 9.807655 10.351934 12.377434 13.258334 9.714578 10.570407 12.850971 10.781598 9.130655 8.908781 1.275782 7.561189 10.661649 11.840412 8.185679 9.122844 9.360595 7.347248 11.066843 7.547249 6.912410 10.975359 6.121277 3.083145 6.767639 7.708787 11.133767 10.366560 7.363249 8.272966 10.843742 6.158430 11.776130 8.932211 10.695220 10.566957 10.812034 10.597714 10.957903 8.435658 6.926838 9.402942 6.475459 9.620082 7.194650 11.614244 9.822681 8.099154 13.785499 9.267308 9.627830 13.211780 11.861218 10.105509 2.083145 TCGA-A2-A4RX 67 0 NA 742 breast stage iia t2 n0 m0 female 2012 NA NA metaplastic carcinoma 0 black or african american not hispanic or latino NA NA 2 5 NA NA 2 5 1 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.080784e-07 10.7997743 10.6074934 11.4294245 9.5576996 7.8255510 9.0219483 10.9990338 10.6300406 11.9854223 12.7651955 10.0776907 10.2857111 0.3336527 12.4505291 3.0341453 10.2688629 5.9919095 8.4885158 8.1665879 6.6646151 NA 8.7849090 7.4935689 9.5355155 10.7065629 5.3109762 -0.6663473 11.1955602 10.7195603 0.3336527 8.7683259 9.4304130 0.3336527 5.6004839 9.7931295 9.8660538 9.0530866 10.3294651 10.0201984 9.2420906 3.5036286 6.9847500 16.8261222 8.6940841 9.7280748 10.9923557 11.0100958 5.2405891 NA 8.9612318 13.5700111 -0.6663473 10.7833624 8.7557625 6.9557499 4.7931312 8.8767297 11.7393712 10.0114175 12.1691562 12.8014308 7.1084847 11.2148118 10.9988206 10.8689732 11.7176721 5.4211593 11.2330548 10.5474096 NA 10.7000201 9.5036228 4.2916109 4.6556266 11.4812208 9.7065630 10.4815388 9.8796277 6.5816254 10.0743219 14.3605671 12.8232950 10.2285157 9.8902039 -0.0011843 -0.0011843 0.0139110 0.0962340 0.0966700 -0.4617400 0.2878700 0.0984760 0.1241800 0.3646800 0.3646800 0.3402600 -0.4724700 -0.4724700 0.0462750 0.0462750 0.0462750 -0.4911100 -0.4692900 -0.2257600 0.2537100 -0.0008316 -0.2259400 -0.2126800 -0.2126800 0.0300290 0.0300290 0.0300290 0.2331800 -0.0533410 -0.0011843 -0.2419200 0.1007400 -0.4930300 -0.4617400 0.3312400 0.3312400 0.0984760 0.1241800 0.1064300 -0.4975700 -0.8031900 0.3429700 0.0560850 0.0560850 0.0530370 0.0303810 -0.4724700 -0.4801800 0.0462750 0.0462750 0.0462750 0.0376560 -0.4692900 -0.4692900 -0.4692900 -0.2257600 0.2537100 -0.0024926 0.0000000 -0.2259400 -0.2126800 0.0680910 0.0300290 0.0300290 0.2331800 0.0359470 0.0386300 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.226 -0.226 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 0.000 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.226 -0.226 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 0.000 9.3698715 14.7382740 6.0885847 10.6016549 5.6190990 11.8767297 6.9990337 8.3280515 8.0616185 9.3849068 0.3336527 9.3652612 7.0616185 9.7462677 9.8405013 3.2405891 9.8873271 10.5352092 8.7473260 9.0650170 8.8052309 8.4238101 12.3777504 1.3337100 9.2209185 11.4014683 4.4211627 NA 10.8988000 3.7260137 12.1010547 12.4173434 7.3671212 10.4071700 8.5649192 9.6109853 6.0479440 1.9186534 0.9186915 5.1916771 8.6283187 9.1378288 6.4105141 6.3449243 10.0164204 6.7599627 9.9584933 7.2102145 9.4051602 0.3336527 13.4628199 5.4211593 4.8882854 8.4154743 7.1811940 7.4264551 10.1862274 8.1216003 8.3365128 9.9757495 12.8604416 0.3336527 10.6323333 1.6556266 8.5601100 5.1410526 7.7807812 7.7130765 11.6571664 7.0061230 7.8215380 12.4505291 10.1220981 10.3273439 6.6646151 10.5595078 9.1281137 10.3449251 13.1185372 11.7073787 8.9612318 7.3052419 0.9186915 7.4158465 10.7714499 11.705475 7.013177 9.157065 8.511117 8.845451 10.592735 7.628319 6.911127 10.077691 10.720099 3.034145 7.673548 9.437209 13.188858 10.636337 9.023696 9.273277 10.229273 7.518573 11.997694 9.053087 10.303084 9.989229 12.003469 12.197110 11.003469 9.551656 8.506125 10.163032 8.367121 10.783362 9.379457 11.218250 8.876730 8.115058 13.938367 9.981156 10.821035 13.343789 11.448416 9.764150 2.503629 TCGA-A2-A4RY 46 0 NA 648 breast stage iiic t3 n3a m0 female 2012 NA yes infiltrating lobular carcinoma 18 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 10.345606 9.364040 11.852465 8.993908 8.169392 9.103804 10.844378 9.850544 11.074803 12.423149 11.566985 10.535999 1.562084 13.320424 3.784452 10.578870 7.831968 8.921080 10.672763 11.660314 4.186556 12.475201 7.554528 9.623127 10.523994 6.243886 -1.022977 9.902654 8.332451 5.531687 8.698199 7.725293 2.147014 4.784457 10.042516 9.677539 9.153273 11.345879 9.862796 11.274302 11.071837 10.546006 15.202721 8.611711 10.401791 11.260188 10.972513 6.205918 4.907838 8.805236 12.475076 -0.022830 11.052913 5.334651 6.308017 3.977097 10.049902 11.984828 10.505065 13.268774 12.957864 8.191419 10.686614 10.796081 11.130335 11.570024 4.835080 11.760916 11.404150 -1.022977 10.579335 8.909314 5.650655 5.186552 10.765818 10.096689 10.599609 9.148276 3.977097 10.288848 14.415437 13.277953 10.319730 10.161975 0.0616290 0.0616290 0.1592000 0.0031910 0.0026683 0.0063871 0.0027745 -0.1097200 -0.1097200 0.7571900 0.7571900 -0.0128510 0.0030522 -0.0022174 0.0011093 0.0011093 0.0011093 -0.0019399 -0.0019399 0.0045800 -0.0552290 0.0015255 -0.0349040 -0.0349040 -0.0349040 0.0075000 0.0075000 0.0075000 -0.0045695 0.0616290 0.0616290 -0.0133830 0.0031910 0.0063871 0.0019833 0.0027745 0.0027745 -0.1097200 -0.1097200 -0.1097200 0.0019418 -0.0075193 -0.0305400 0.0000000 0.0000000 0.0000000 0.0000000 0.0049969 0.0049969 0.0011093 0.0011093 0.0011093 0.0011093 -0.0019399 -0.0019399 -0.0019399 0.0045800 -0.0552290 0.0015255 -0.1094600 -0.0349040 -0.0349040 0.0079175 0.0075000 0.0075000 -0.0045695 -0.0011087 -0.1656100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7804235 13.1897480 7.8381866 11.0950673 4.6412975 11.2546776 5.4848954 0.9770967 9.0077668 10.0869302 -0.0228300 8.9756901 4.6209558 9.2613453 10.1147311 3.5620592 9.4538457 9.6810031 10.7948827 10.3737044 9.7046031 8.0672122 11.6105490 2.8839922 9.7311520 10.4704547 7.0431892 NA 10.7940833 5.7452831 12.7208821 12.0643967 7.8989405 9.9728668 8.4987000 9.2843004 6.2532235 1.7844621 0.5620836 4.8839922 9.0118987 9.3737043 9.2107193 6.8959630 9.9100451 6.3258271 9.8967078 6.3080168 9.8304092 0.5620836 12.0163614 3.4365350 5.7452831 9.2636112 5.9391866 7.4769454 9.9041368 8.2321283 8.9063579 0.5620836 13.6111165 2.5620592 10.6784060 NA 8.0539150 6.2717207 7.4365308 8.7319873 12.0486290 4.8597410 8.6245579 13.3204241 10.5055538 9.8366344 11.6603136 11.9421624 9.3488762 10.7007606 13.2378722 11.7886750 8.8052360 7.3694168 0.9770967 7.3737048 10.7976775 11.683164 6.663601 8.819450 9.440624 7.126847 10.665053 7.691345 8.184114 11.566985 6.452833 5.677539 7.862796 6.697310 12.087257 10.469954 8.093443 9.367269 11.036782 6.765002 12.747119 9.153273 10.207720 10.129384 11.311652 11.199291 10.737404 8.647756 -0.022830 9.845320 8.321396 11.052913 5.919614 11.710539 10.049902 7.225027 14.169662 9.461922 10.268270 12.873621 11.283161 10.225620 1.977097 TCGA-A2-A4S0 77 0 NA 706 breast stage iia t2 n0 m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 1 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.387189e-07 10.72534061 9.60823227 11.78734304 9.80953069 8.08370589 8.78414536 11.72311593 9.80869169 9.19576417 13.26292574 11.91990170 10.53352091 2.06132691 11.89106054 4.23126343 6.79604740 7.36967673 7.98615036 10.74125773 13.74224671 0.06129234 15.10579598 0.06129234 9.97683631 10.71283803 8.20854262 NA 10.42656668 10.96747680 2.52077424 7.20599651 5.80280584 -0.93870766 4.06133555 9.47072882 9.95008109 11.43365877 9.12473291 9.89343669 11.20949662 14.26215981 11.58954774 14.67452297 8.35333741 10.83530119 11.61232504 11.28352897 3.45364927 NA 8.51666486 9.46434991 0.06129234 10.82039375 2.64630093 3.76177460 3.14880398 10.00970505 11.60267646 10.37308613 12.88699229 12.72889293 8.64442053 10.34268829 10.40402922 10.70022616 11.08405237 5.01553325 11.30183105 12.63805836 NA 10.17898086 8.41006587 3.76565143 4.45365585 9.94245175 10.19640578 10.91620619 9.22750091 1.06136147 4.70519277 11.46381697 11.27140029 10.33338437 8.82786665 -0.00041585 -0.00041585 -0.00041585 -0.00368400 0.00277450 0.00027728 -0.00152430 0.00268340 0.00198680 -0.00201180 -0.00201180 -0.00201180 0.00000000 0.00000000 -0.00152430 -0.00152430 -0.00152430 0.00138680 0.00138680 0.00055459 0.00235810 0.00527490 -0.00307200 -0.00307200 -0.00307200 0.00124810 0.00124810 0.00124810 -0.00401620 -0.00041585 -0.00041585 0.00694350 -0.00368400 0.00027728 0.00027728 -0.00152430 -0.00152430 0.00889200 0.00268340 0.00198680 -0.00097017 -0.00097017 -0.00201180 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00000000 0.00000000 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00138680 -0.00674380 -0.00812090 0.00055459 0.00235810 -0.00192230 -0.00263220 0.00194180 -0.00307200 0.00097064 0.00124810 0.00124810 -0.00401620 0.00223830 -0.00290910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.40118758 11.65962300 7.20088880 9.89738823 1.49697358 11.49126758 1.06136147 NA 8.42766022 8.32343267 NA 5.71955037 1.06136147 9.77128312 9.43963269 0.64625484 6.25116235 9.43637716 13.23149762 10.30451184 10.47565309 7.50842073 10.95084178 3.96822902 10.01771400 9.81622529 2.76177460 NA 10.78158208 3.23126343 11.96050588 12.01970928 7.05002275 11.11526368 7.26100983 9.22372903 7.06133771 1.06136147 1.38327574 3.64630093 9.95918330 11.62143177 9.32812444 NA 10.74609959 7.08370589 10.24683274 4.58490239 9.29854789 NA 13.84908737 0.06129234 11.56018703 9.21210067 7.88158081 0.06129234 7.93785459 6.54515292 8.20088929 -0.93870766 13.04370757 1.38327574 10.78158208 NA 8.75656600 6.14879991 7.36967673 9.85818868 13.8833205 3.1488040 8.8426976 11.8910605 10.2493084 9.9637130 13.7422467 13.4954448 8.8095305 10.4933576 12.3933744 11.6605533 8.5166649 6.0837048 -0.9387077 7.6387668 10.8459726 11.05569125 7.84597296 9.05427627 9.03431753 8.13547946 10.51154384 6.80280455 9.15805295 11.91990170 7.23626395 7.21108522 8.67972323 6.02816024 11.07291452 9.38776727 8.10299714 9.29375878 10.36739946 2.86868677 12.22595724 11.43365877 9.98169071 10.27261777 11.75830534 9.48655369 10.48917441 9.39895976 NA 9.65305643 0.06129234 10.82039375 3.91932101 11.38896624 10.00970505 7.07256461 13.59970866 10.12877219 9.96597240 13.02558843 9.98540807 9.79095852 1.06136147 TCGA-A2-A4S1 66 0 NA 820 breast stage iia t2 n0 m0 female 2012 NA yes metaplastic carcinoma 0 white not hispanic or latino NA NA 2 5 NA NA 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.872705e-06 2.080784e-07 8.6187199 8.7669711 10.7830828 6.9666427 10.2161195 9.4108272 6.2427035 11.0041809 11.6175485 3.0889048 9.0196363 10.3253917 NA 7.2747658 2.9368923 14.3607705 4.8544346 8.9957898 7.9764244 -0.2331081 NA 5.4674099 3.2264006 9.7299392 0.7669767 7.4674107 0.7669767 11.9211562 8.2427044 3.2264006 8.8003939 8.3594280 NA 4.0888963 9.3311205 9.1742386 8.6124609 8.2866072 9.1001264 10.1657146 NA 2.3519392 14.2412473 6.6766243 10.1168050 9.3387237 8.8330602 2.9368923 1.3519110 8.4604579 11.5063297 -0.2331081 9.4760548 6.4674099 7.2099144 4.8962525 10.4393962 11.4936149 10.6265058 10.7226208 12.2981087 10.2036825 9.9567955 9.7934944 10.8431185 10.1278181 3.2264006 11.7841273 8.2866072 2.0888879 11.1436390 8.3853564 4.4257547 6.4534715 10.3090355 9.4198159 10.3603621 8.9368958 5.4393971 10.0956458 13.3983754 13.0896033 9.3631608 10.3339763 -0.0354480 -0.0354480 -0.0354480 -0.4422100 0.2183700 0.2036600 1.3028000 0.2382900 0.1802600 0.2626300 0.2626300 0.2590200 -0.3950800 -0.3942500 -0.0952520 -0.0749450 -0.0749450 -0.4305100 -0.4305100 -0.3371000 -0.1230400 -0.4392900 -0.3853300 -0.3853300 0.2532400 -0.1561800 -0.7587400 0.0084743 0.0207630 -0.0354480 -0.0354480 0.1832800 -0.4356100 0.2088600 0.1904100 0.2067100 0.2067100 0.2382900 0.1802600 -0.4960000 0.8508700 0.2114600 0.2626300 -0.4487800 -0.4487800 0.0871000 -0.0873140 -0.4019000 -0.3877200 -0.0952520 -0.0749450 -0.1084900 -0.0870490 -0.4305100 -0.4305100 -0.3975300 -0.3371000 -0.0976270 0.2434200 -0.0903610 -0.3853300 -0.3853300 -0.4365900 -0.1561800 0.0084743 0.0241270 0.1734700 0.0417410 -0.395 -0.395 0.000 0.000 -0.431 -0.431 -0.337 -0.119 -0.400 0.712 0.712 -0.385 -0.385 -0.421 -0.421 -0.156 0.000 0.000 0.000 0.000 0.000 0.170 0.000 0.149 0.149 -0.436 -0.436 0.209 0.209 0.207 0.207 0.238 0.238 0.219 0.219 0.253 0.253 -0.383 -0.383 0.000 0.000 -0.395 -0.395 0.000 0.000 -0.431 -0.431 -0.337 -0.119 -0.400 0.712 0.712 -0.385 -0.385 -0.421 -0.421 -0.156 0.000 0.000 0.000 0.000 0.000 0.170 0.000 0.149 0.149 -0.436 -0.436 0.209 0.209 0.207 0.207 0.238 0.238 0.219 0.219 0.253 0.253 -0.383 -0.383 0.000 0.000 8.8464557 15.4709826 -0.2331081 10.3206002 2.1891920 9.9666433 0.7669767 4.3519322 9.4126293 10.7774990 NA 9.1827127 4.0888963 10.8256392 9.4534715 2.3519392 8.9065224 9.1112669 7.1848238 10.0419314 9.7845868 6.3668834 12.9598802 4.0148998 3.5743316 10.6813561 1.7669767 NA 11.1387476 1.7669767 12.5147444 12.5966937 8.5711019 9.9629583 10.9312494 10.4144293 2.0888879 0.7669767 -0.2331081 NA 8.8517793 11.2648228 5.6977071 7.4180229 9.0963636 6.9957898 9.4358559 4.0148998 10.9078007 NA 11.2502829 -0.2331081 2.0888879 9.4497900 6.4491222 -0.2331081 11.3056449 11.2978649 3.2264006 2.9368923 12.6813561 1.3519110 11.3963276 NA 8.6218394 6.2905331 8.1506754 8.9192558 11.9471288 5.3215602 8.8330602 7.2747658 10.0325861 9.9580302 -0.2331081 8.0384340 8.7298668 9.4072159 12.4015551 10.7690828 8.4604579 7.9518465 -0.2331081 7.2983522 9.5855532 10.7204399 2.0888879 8.5871501 6.3215602 6.7556554 8.7620315 8.6434879 5.9567955 9.0196363 9.7823860 2.3519392 6.6617881 7.4409514 13.2166355 9.9167180 5.9764232 10.0911514 7.0053753 5.0523724 12.0343838 8.6124609 10.8735339 9.6991857 9.5727148 10.0787192 10.0029851 7.1420100 0.7669767 10.8221178 3.8544346 9.4760548 11.2553132 10.2036825 10.4393962 6.7370188 13.2706725 10.2222981 10.6648164 11.6006517 10.2578218 9.3080675 0.7669767 TCGA-A2-A4S2 62 0 NA 643 breast stage iiia t3 n2 m0 female 2012 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 3 3 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 9.8916248 10.2546934 11.7016483 9.1046918 8.0440766 9.5449926 10.8468099 9.4887516 10.7973682 13.0630448 11.5132627 10.5421368 2.1479253 12.8842203 2.2999187 9.1764325 6.9379893 8.0733843 10.5638888 12.8615853 -1.0220973 14.1064651 4.1479091 9.9275150 10.6200391 8.9723408 0.5629628 10.2948345 12.3622315 2.5629384 7.8359683 6.4537200 -1.0220973 3.5015538 9.8187653 9.7420296 9.9524020 11.2956826 10.2294698 11.1730519 4.4374208 11.4211899 14.9024751 8.3523096 10.4643196 11.3423956 10.5709115 4.7593476 NA 8.9538353 11.8470028 NA 10.1391192 6.4126156 6.5402304 5.1072694 9.8629211 11.3963671 10.5161763 11.8394620 12.3018865 7.9609808 10.3595303 10.2193747 10.8250447 10.8908767 4.7328770 10.7245017 12.3604763 -1.0220973 10.1603817 8.6784269 3.5635487 6.0969281 10.4902340 9.0100332 10.1207327 9.5954548 1.7853413 9.5161763 12.9444027 12.5861266 10.1008154 9.8069172 -0.6112400 1.1956000 1.1974000 -0.0067813 -0.0067813 0.0000000 1.2680000 -0.0044312 0.0305910 0.6059300 0.6059300 0.6059300 -0.0348310 -0.0132250 -0.0245240 -0.0245240 -0.0245240 -0.0131270 0.0016642 -0.6870200 -0.0205490 -0.0383550 -0.0650450 -0.0650450 -0.0650450 0.5190900 0.5190900 0.5190900 0.5605500 -0.0783180 -0.6112400 0.0018030 -0.0067813 0.0000000 0.0061090 1.2680000 1.2680000 -0.0044312 0.0305910 0.0029133 -0.0235660 0.0073609 0.6059300 0.6053900 0.6053900 0.6053900 0.5798000 -0.0125760 -0.0349570 -0.0245240 -0.0245240 -0.6342400 -0.6342400 -0.0131270 -0.0288260 -0.0288260 -0.6052600 -0.0205490 -0.0359930 -0.0465830 -0.0650450 -0.0650450 -0.0107840 0.5190900 0.5190900 0.5344100 -0.0062286 -0.0817380 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 0.107 8.96667213 13.44959907 8.15041497 10.42351956 4.21409371 10.77199696 4.29991866 -0.02195084 8.52295182 9.17643249 -1.02209733 6.88223097 3.78534130 9.66273601 9.69480673 3.37030380 8.32671530 9.06013631 12.45258056 10.38472386 9.67499833 7.87280537 11.01964653 2.56293841 9.41052916 10.33443934 4.59269622 NA 10.70079489 2.29991866 11.35356987 11.69480682 8.21160703 9.47683651 11.69523538 9.75688585 3.78534130 2.29991866 1.29988936 4.73287698 9.28176802 9.61189071 10.22056600 4.78534130 8.44063292 7.23537477 10.05480290 6.46984040 9.00727456 NA 11.57743534 4.10726939 4.22591499 9.37692348 6.06788821 4.86063014 10.42403671 8.20920867 7.10210904 2.29991866 12.85229637 1.29988936 10.84449354 NA 7.52101932 5.29991499 7.49762354 8.14791210 12.452323 4.860630 7.887880 12.884220 9.472843 10.410007 12.861585 11.786750 8.798166 10.229470 13.305189 10.979044 8.953835 8.540230 1.562963 6.629039 10.281768 11.720297 6.977987 8.225915 8.664488 7.762622 10.727635 8.256437 5.989214 11.513263 6.949531 2.678433 6.890877 6.876921 10.285757 10.606433 8.324501 8.664488 12.836648 6.107269 11.779142 9.952402 11.112735 9.849122 11.886192 10.120733 10.952760 7.854504 -1.022097 9.028530 5.835970 10.139119 7.387378 11.503508 9.862921 7.348675 12.329755 10.058139 9.569510 12.851528 11.028516 10.102755 2.437414 TCGA-A2-A4S3 59 0 NA 666 breast stage iib t2 n1a m0 female 2012 NA NA infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 1 NA NA 2 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 7.282743e-07 9.8291341 8.8299872 10.9700463 8.4519871 9.8678552 10.0640260 8.9509632 9.4564123 9.9735240 13.1646487 10.8740711 10.2250628 -0.8945901 12.2691229 0.1054099 8.2113817 6.0479876 8.9063732 7.4453236 12.9534114 1.4273916 12.9726554 5.5649055 9.5341893 11.5254334 6.9063735 2.6904394 9.6810124 10.7831929 1.1054769 9.1208882 7.1167006 -0.8945901 3.4274050 9.1250639 10.4257097 9.4160860 9.4115349 9.8503070 10.7252347 3.7493305 10.1614335 14.2999223 8.1428555 9.3450719 10.7067798 11.0078483 4.4273983 6.3908757 8.4783385 9.7538308 -0.8945901 10.2996144 4.4977912 6.3051461 5.4274017 10.0093550 11.5233257 10.6339274 10.9240554 13.1473035 7.9819902 11.0074714 9.1661691 11.0078483 10.3124875 4.2754019 11.2697517 10.0640260 1.1054769 9.9850565 10.2087611 3.9045612 4.9128271 10.4143810 9.5233257 11.1929361 11.7972167 2.1054769 7.0884671 13.5184399 10.9387587 10.2533141 8.4408638 -0.49767000 0.05722600 0.02216400 0.23086000 0.01684500 -0.46195000 0.44833000 0.00000000 0.00000000 1.02740000 1.83840000 0.48389000 -0.48386000 0.02862200 0.02721600 0.02721600 0.48303000 0.07484000 0.01506800 -0.50877000 0.20289000 -0.48790000 0.00013863 -0.48081000 0.49614000 0.00346870 0.00346870 0.00346870 0.07225300 -0.47131000 -0.49767000 -0.05940400 -0.48743000 -0.49871000 -0.51928000 -0.51208000 -0.51208000 0.06222300 0.00000000 0.00000000 0.17242000 0.02834100 -0.50422000 -0.52205000 -0.52205000 -0.48176000 -0.48176000 0.02862200 0.03467700 0.02721600 0.02721600 -0.49089000 -0.50116000 0.07484000 -0.43083000 0.06422500 0.04783600 0.07829400 -0.48050000 -0.47681000 -0.42538000 0.79181000 -0.53397000 -0.48932000 0.00346870 -0.50572000 0.01572700 0.09928800 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 -0.162 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 -0.162 8.4891776 12.6981638 6.8059128 9.3498370 5.1278396 11.4194899 2.5649147 NA 9.4750705 7.7636844 3.2753945 7.0818370 3.1929358 11.1132013 10.0018056 6.7420979 8.1742516 8.8214353 11.0228453 11.6786470 9.0402993 7.1769361 10.2928253 1.6904171 8.7884678 9.9987747 4.3149285 NA 11.9921224 0.1054099 11.7728066 12.3677149 6.5484166 9.9696593 9.0002910 10.7007307 6.8197193 2.8059115 1.6904171 1.9128414 10.3599114 10.1539601 9.7805481 2.2753945 9.5870204 9.2841382 10.2514054 6.0362110 11.0813212 NA 11.1233255 3.4977912 3.8059115 10.2595887 4.8648943 5.0827537 9.0168651 7.7565250 7.6446322 1.6904171 13.4173634 NA 10.5556535 NA 8.8802603 4.2347542 8.0712575 9.2166089 11.498630 7.846940 8.242464 12.269123 9.031769 11.077017 12.953411 9.777014 9.861195 11.119145 11.994026 10.009355 8.478338 8.376936 4.427398 8.469608 11.524380 10.3821793 5.0123631 8.1982304 9.1862908 10.6724786 9.3340274 7.6446322 8.6092988 10.8740711 7.9128283 2.2753945 8.3534009 9.9552380 11.9862047 9.9055642 8.0884665 9.9071817 9.7411914 6.3908757 10.9584201 9.4160860 9.6781735 10.7393766 11.3798514 9.6951244 10.1809524 7.8966364 0.1054099 8.9695511 6.4717955 10.2996144 6.4977912 10.3365804 10.0093550 7.5063528 12.8611954 10.1047686 10.0273141 12.4029627 10.4875568 9.0726994 0.1054099 TCGA-A7-A0CD 66 0 NA 1165 breast stage i t1 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 10.9580001 10.3380201 11.8408255 9.4687289 8.9907450 8.9766538 10.5688172 9.0662709 10.5159200 13.7916042 9.8837664 10.6294117 0.8033924 13.8859856 5.2628240 8.1462082 8.0639203 8.1550682 9.4363882 13.6107143 2.6107473 14.6799099 1.9188823 9.1169337 10.8748554 7.5847528 NA 8.9522931 9.7968031 1.6778465 8.1298224 6.0764116 -1.7814048 4.8183444 9.9188702 10.9012056 9.6541007 11.5253466 9.4064010 11.1069835 3.2628240 11.9743612 15.0296295 7.0773755 8.9907450 11.5740568 12.1476889 4.5934673 -1.7814048 10.6997254 11.5287592 -0.7816528 10.9979447 4.2845215 4.1726235 4.8183444 10.2682791 11.8028058 9.9598975 11.7444406 12.8221727 8.4639833 11.3060590 11.3632623 11.2698093 10.9940407 5.5582799 12.5624489 12.6110833 NA 10.0552698 9.1380388 3.3927570 4.3883549 10.0505293 9.4980410 10.9380332 10.6171741 2.2184402 7.1372935 13.4372207 11.8986801 9.9322465 8.7082783 -0.052801 1.110100 1.207200 0.550180 0.550180 0.000000 0.593860 1.471400 -0.683050 0.573260 0.573260 0.562020 -0.065624 -0.053881 0.527480 0.527480 0.527480 0.542590 0.542590 -0.752030 -0.073877 -0.089302 1.436900 1.436900 1.436900 0.362150 0.362150 0.362150 0.475640 -0.180120 -0.052801 -0.049154 0.550180 -0.125940 0.000000 0.593860 0.593860 1.471400 -0.683050 -0.683050 -0.785520 -0.700730 0.567740 -0.078278 -0.078278 -0.078278 -0.078278 -0.053881 -0.067486 0.527480 0.527480 0.527480 0.527480 0.542590 0.542590 0.542590 -0.673430 -0.073877 -0.089302 -0.807080 -0.765610 1.436900 0.560450 0.268120 0.362150 0.475640 -0.084926 0.969250 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 0.127 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 0.127 7.1041270 12.0335135 6.4327490 9.0209469 0.2576141 10.8924020 -0.7816528 -1.7814048 7.7222563 7.3958503 NA 7.5244924 7.0290022 9.9808125 9.4651711 1.5403745 6.0128457 10.1613114 10.7358538 11.0982051 9.5906971 8.1813262 10.7517602 1.0258084 10.4910602 10.2366306 2.1253205 NA 10.8941670 3.3883549 13.1250393 11.5461234 7.8961501 11.1014555 8.8739611 9.4805253 3.8331431 1.2184092 0.8033924 1.0258084 9.0607808 9.8672373 10.4989112 4.6778634 6.1714631 6.8766422 9.8336003 9.0128463 10.3977175 NA 12.3567823 1.2184092 4.1010701 8.8942906 5.2205699 3.4278877 8.4532480 7.7787632 5.6530600 -0.7816528 14.0144194 -0.1966076 10.1439849 NA 9.3864758 5.3477117 8.0497375 9.1748066 13.229299 5.063921 8.304567 13.885986 9.662177 10.870827 13.610714 12.809544 9.381451 11.170808 12.761100 11.845394 10.699725 9.304567 1.025808 8.214198 11.690867 10.958211 8.184215 8.866788 9.166798 9.956455 10.046634 5.718277 9.126823 9.883766 7.009594 1.218409 4.773020 7.342991 11.390233 7.784484 8.468729 8.652016 13.748379 4.284522 11.140623 9.654101 10.682210 10.006741 11.079517 9.415647 10.648099 9.515920 NA 8.684344 4.305890 10.997945 5.979982 10.099544 10.268279 6.979982 13.820926 9.791604 10.542892 12.513984 10.424834 9.670672 1.540375 TCGA-A7-A0CE 57 0 NA 1074 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.899903e-06 5.58795e-07 9.3304316 9.9080314 11.4681768 9.1144823 8.9110824 8.4023035 9.1267829 11.0125811 10.5308427 13.4073540 11.1105060 10.6140210 -0.5606428 12.8757935 3.3463045 12.0306959 4.7248085 8.8035419 9.2051078 7.8967883 0.4393572 10.2503805 8.3745722 10.1897626 10.6682260 4.1118326 0.4393572 7.9590433 11.6591809 0.4393572 6.8100947 8.3994091 1.2467729 4.2973895 9.3863137 10.6555469 9.3914204 9.5453159 10.2563909 11.2858771 2.6873295 9.6944359 14.4432765 8.0568013 8.9775865 11.3317604 11.5659505 5.4394070 0.4393572 9.5367811 10.7522902 NA 10.5235514 4.8656714 4.5686888 8.2042787 8.2595860 12.0598563 9.1741170 11.2172790 12.5308427 8.0092632 11.4268490 10.9664175 10.6378524 10.9622340 4.8144479 11.7727025 7.3701442 NA 10.0135277 10.4492359 3.7336580 4.6682269 11.4919754 10.5165568 10.4113100 9.4776405 3.7248140 7.9997402 11.8733839 11.9531349 10.4834598 9.9292553 1.1380000 1.4767000 0.9013600 -0.5080200 0.5158200 0.0076799 0.0548450 0.6673900 0.5753200 0.0796330 0.0796330 0.1493900 -0.0276310 -0.0535720 -0.4639500 -0.4639500 -0.0106060 0.6255700 -0.0340460 0.4584200 -0.4919000 0.4449900 0.0000000 0.0000000 0.0975850 0.4841100 -0.0909840 -0.0909840 -0.0078458 0.0638370 0.0423490 -0.4268800 -0.5080200 -0.4813100 -1.0586000 0.0178900 -0.0485640 0.6673900 0.0473160 0.0938080 0.6146700 0.5409300 -1.2929000 0.0297880 0.0297880 -0.4662300 -0.4561500 -0.0535720 -0.0535720 -0.4639500 -0.4639500 -0.5914300 -0.5914300 0.6255700 -0.4671400 -0.4671400 -0.4624500 -0.5101600 -1.0325000 -0.4766700 0.0000000 0.0000000 0.0278200 -1.0369000 -0.0909840 -0.4367700 -0.2012100 -0.4745900 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.635 -0.477 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.635 -0.477 7.0504320 12.5849415 2.2467729 8.9580605 3.8676791 10.5341448 0.7613704 NA 9.1484911 9.7775866 6.4166878 7.6802224 3.0832644 10.6979733 9.4195469 1.8988275 5.0092621 10.8212206 12.3046573 9.3462979 9.5234649 7.0243696 13.3878202 1.6093295 8.3994091 10.4817507 4.9785663 -1.5606428 10.6494698 3.2973822 12.6675496 13.6722779 7.5162232 10.1250321 9.4878943 9.8111839 4.9472033 3.2973822 -0.5606428 4.4617774 9.3782517 9.7190179 8.1791881 7.5188923 9.7730883 8.2419236 11.2123404 6.1188871 10.5789587 2.3463045 11.7429027 2.1398624 9.6664214 9.8987672 5.8699429 5.1808759 8.9590436 8.7178567 7.2240422 4.4838029 13.4577379 NA 10.8755983 NA 8.7892415 4.2973895 8.6464215 5.9312599 9.879622 9.215840 8.587884 12.875794 10.429036 12.318799 7.896788 12.001173 9.571264 11.435351 13.367694 11.486702 9.536781 7.941244 1.609329 7.489256 10.652815 10.940249 5.334225 8.681391 8.606825 9.835477 9.536498 4.547931 5.259585 11.110506 9.960026 1.761328 7.867767 8.678886 12.623663 9.123279 8.001650 9.233011 10.068764 12.131914 10.034870 9.391420 9.718437 10.016836 11.685554 10.259985 10.781204 9.288030 -1.560643 8.837756 6.322051 10.523551 5.687335 9.987251 8.259586 8.034254 13.802036 11.246360 10.755689 12.663409 10.164347 9.084165 4.648862 TCGA-A7-A0CG 78 0 NA 1043 breast stage iia t2 n0 (i-) m0 female 2010 NA yes mixed histology (please specify) 0 white not hispanic or latino 8 2 2 NA 3 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 9.8872470 9.9915975 11.7946556 10.0669045 7.8305437 9.7327837 10.1479876 9.6527466 9.5279189 12.6417136 10.7721682 10.6506347 4.9174222 12.5563038 4.0081910 8.9993628 6.2726858 8.6520429 11.1197677 13.0068115 0.9725456 12.6812157 7.9566962 8.9103780 10.7018437 5.4055227 NA 9.5886706 9.7167240 5.0935771 7.5515014 7.4515342 0.6506727 5.8404582 10.2238085 10.4648166 9.4992577 12.4560763 10.3870367 11.8127113 6.8003822 11.5968099 14.1952974 8.4014756 9.4409831 11.3068361 11.1031334 5.4450513 0.6506727 9.4835248 12.8281321 -0.3494192 11.4136396 5.6048304 7.2128767 4.6279161 10.7663286 11.9572661 10.5144339 12.0304192 12.8530647 7.5393783 10.7184052 10.4308218 11.6792315 11.2025833 5.2355969 12.3001155 9.1324342 NA 9.9250129 9.3545383 2.8333354 6.0343390 10.4740020 10.2542611 9.4827336 10.2033038 4.2052205 10.0642626 13.1608426 11.8961874 10.2204903 9.3648803 -0.0170910 0.4817600 0.9559700 -0.0027352 -0.0092068 -0.0130370 0.0274480 0.0057822 -0.0071970 0.0302610 0.0302610 -0.0328320 0.0098254 0.0269260 0.0135830 0.0135830 0.0027939 0.0524750 -0.0101430 -0.0126240 0.0188120 0.0285730 -0.3977800 -0.3977800 -0.3977800 0.0840140 0.0840140 0.0840140 0.0558930 -0.0170910 -0.0170910 -0.0210090 0.0063384 -0.0130370 -0.0185380 -0.0157900 -0.0157900 0.0057822 -0.0071970 0.0082863 0.0151190 0.0110420 0.0000000 0.0332180 0.0332180 0.0332180 0.0332180 0.0269260 0.0399940 0.0135830 0.0135830 0.0027939 0.0027939 0.0053675 0.0060603 -0.3838500 -0.0126240 0.0188120 0.0285730 -0.4119400 -0.3977800 -0.3977800 -0.4298900 0.0840140 0.0840140 0.0516220 -0.0123480 -0.3841800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9736895 12.6800945 5.3088450 9.8186800 5.3678987 10.4783744 1.9725456 0.9725456 8.4450504 8.3301147 -1.3492354 8.9252458 2.8985566 9.8955932 8.8180529 1.9725456 10.5552694 9.5916824 10.9736895 9.5109457 10.1010315 8.1324339 11.3190766 2.7380977 9.4953404 9.3528075 3.2356045 1.4580145 9.9921535 4.0429507 13.3114663 12.2717708 9.2944909 10.3195197 8.2598134 8.9255951 5.6164195 1.6506267 1.2356045 -0.3494192 8.2166886 8.9348806 11.1437396 6.6279147 7.6224370 4.6950306 9.8594787 5.8890403 9.1263681 -1.3492354 12.3205163 3.6048304 4.5086188 10.0500195 6.1558120 6.8105061 9.5370933 9.4038514 8.2926865 -0.3494192 14.2306282 1.9725456 10.1751764 NA 8.0831767 6.2726858 7.7824918 8.8305437 12.198782 5.431994 8.485106 12.556304 10.636832 11.526000 13.006812 12.359180 9.260986 11.020232 13.204024 9.532513 9.483525 8.917421 NA 6.835510 11.451535 11.220016 7.126368 9.177134 8.507060 7.828054 10.507706 7.695029 8.287259 10.772168 5.716725 2.235605 4.738098 6.739158 11.579338 11.078733 7.877047 8.140483 12.203184 8.014769 10.379316 9.499258 10.529835 9.492199 11.289749 9.298093 10.780884 9.680612 -1.349235 9.569468 8.085263 11.413640 7.593149 10.599732 10.766329 7.492985 14.457839 10.028930 11.093837 12.327143 10.001574 9.834270 2.110063 TCGA-A7-A0CH 79 0 NA 1079 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 2 NA 3 1 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.7254110 10.0465956 12.0340477 9.7750884 8.2374547 9.1811214 10.6210092 9.6938507 9.6004881 13.2338670 11.4378645 10.4385447 3.1951428 12.8989652 4.0122826 9.3351824 6.6976446 8.2724684 9.9152660 14.0811671 1.1247252 13.9205102 7.0649216 9.4587419 10.7932851 7.9877017 NA 8.8362495 9.7482704 1.6101803 7.6451771 7.0835974 NA 3.8472253 10.2090316 10.2021045 10.6041307 12.4122362 10.4534296 11.6416366 6.9926506 11.7915113 14.4969123 8.8251945 9.6069415 11.8238065 11.6303677 4.0122826 2.7097097 8.9100436 10.9714986 NA 11.1451791 5.1951428 4.8028291 4.2946796 10.2891589 11.7511938 10.4143125 11.5990690 12.9375737 8.4752519 11.0216925 11.0387212 11.6002855 10.9889408 4.9727524 12.5124489 11.8024743 -0.1971037 10.0256214 8.8321137 3.3270118 4.2946796 10.8746241 10.4525318 9.9557452 10.0412313 3.5577164 9.8776371 12.7568411 12.3489976 10.3783659 9.7164640 -6.7813e-03 1.4257e+00 1.4405e+00 9.4491e-03 -5.3709e-03 -4.8461e-03 1.4190e-02 -5.8841e-03 -1.3880e-02 2.0203e-02 2.0203e-02 1.3074e-02 3.0522e-03 1.0006e-02 -5.5444e-04 -5.5444e-04 -5.5444e-04 -7.4720e-03 -7.4720e-03 4.1632e-03 9.7064e-04 4.5800e-03 6.9725e-05 6.9725e-05 9.3098e-03 -8.8526e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -6.7813e-03 -6.7813e-03 -8.6588e-03 9.4491e-03 -4.8461e-03 -4.8461e-03 -5.2610e-03 -5.2610e-03 9.1705e-03 -1.3880e-02 -1.3880e-02 6.1090e-03 6.1090e-03 2.0203e-02 0.0000e+00 0.0000e+00 0.0000e+00 0.0000e+00 1.0006e-02 1.0006e-02 -1.7505e-03 -5.5444e-04 -5.5444e-04 -5.5444e-04 -7.4720e-03 -7.4720e-03 -7.4720e-03 -4.2554e-03 9.7064e-04 1.6632e-02 -7.7744e-01 6.9725e-05 6.9725e-05 8.4743e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -3.0418e-02 -1.0460e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.777 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.777 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3106214 13.3956923 6.0219949 9.4285354 2.8902910 10.4189159 0.8028136 2.8028343 8.2519751 8.5759658 NA 7.4248784 2.7097097 10.4138514 9.2936774 -1.1972691 6.3952839 9.2069037 10.7975335 10.0316452 9.5665867 8.2143376 10.1515547 0.7212414 9.6545755 9.3612473 3.4466797 NA 10.2866423 2.9727478 12.7246675 11.7553858 7.4858213 10.3444072 7.7772408 9.0183596 4.3263863 1.3878037 1.6101803 8.0951480 9.0696130 9.8396871 10.7508287 2.5032724 7.7865042 5.9525735 10.5192173 6.4466830 9.4430716 -0.1971037 13.1244729 2.6101803 4.2946796 9.7551892 5.9030672 0.8028136 9.0086199 7.8635222 4.1603797 1.6101803 13.7220158 -0.1971037 10.0116706 -0.1971037 8.9589096 3.3263935 8.3400450 8.8417455 13.259031 5.142675 8.711219 12.898965 10.279573 11.417306 14.081167 12.940378 8.946210 11.022600 13.887801 8.814054 8.910044 9.879642 -1.197269 7.561050 11.905950 10.8856409 7.9321096 9.1962170 9.2343241 8.3458585 10.3534435 5.7335631 6.7036932 11.4378645 5.7801053 4.4175353 5.9321084 5.2322770 11.0171457 10.3244270 8.4928246 8.2986817 13.3951084 3.0507455 12.3973716 10.6041307 10.4216709 9.8438011 11.2246284 8.9139623 10.5489209 9.3224629 -1.1972691 9.1968605 2.7097097 11.1451791 7.9474850 10.2780533 10.2891589 7.2540375 13.4809315 10.0707836 10.6273876 12.9520974 9.8390001 9.8916148 0.8028136 TCGA-A7-A0CJ 57 0 NA 931 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 1 1 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 9.223500 9.556317 11.712598 8.923940 9.121621 9.582118 10.007243 9.498778 9.101938 13.332342 10.986461 10.398275 2.501031 11.804663 3.117712 7.662922 7.652136 8.612344 11.444331 13.411127 NA 14.173312 2.294577 9.238901 11.563350 3.638537 -1.405834 9.622050 11.612518 NA 7.016209 5.933993 NA 3.638537 9.278016 9.562091 8.923940 11.530230 9.091996 10.931766 10.922258 12.692011 14.191061 4.979403 10.778399 11.318018 10.138142 3.238007 NA 9.291980 10.972980 NA 10.075943 4.822965 4.743892 4.681607 9.866190 11.946739 10.442375 11.257702 13.085997 6.884163 11.660906 11.071902 11.199160 10.994756 3.401494 13.246429 11.275602 NA 9.669623 9.633063 3.805158 4.208853 10.717942 9.734335 10.492367 9.842664 2.916075 9.778399 11.442375 10.686571 9.809677 9.328853 -0.104870 0.413790 0.413790 -0.716400 0.927360 -0.118020 1.410800 0.312740 -0.160770 0.415800 0.415800 1.417400 -0.074277 0.458370 0.423350 0.407610 0.407610 -0.694860 -0.094724 -0.667530 0.471180 -0.667720 -0.656960 -0.656400 0.986590 0.369860 -0.128880 -0.128880 1.159900 0.497010 -0.104870 0.283060 -0.674440 -0.688340 0.300950 0.385180 -0.177900 0.312740 -0.160770 -0.144770 -0.685790 0.431760 -0.652020 -0.633680 -0.637570 -0.072274 -0.113360 -0.974730 -1.279700 0.385180 0.407610 -0.676920 0.446300 -0.666700 -0.094724 -0.094724 -0.668640 0.450540 -0.091023 -0.613470 -0.660680 -0.656400 1.457000 0.803640 -0.128880 1.120100 -0.118870 -0.148110 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.561 -0.561 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.263 -0.123 0.313 0.168 -0.130 -0.130 0.670 1.322 -0.551 0.000 -0.537 -0.537 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.561 -0.561 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.263 -0.123 0.313 0.168 -0.130 -0.130 0.670 1.322 -0.551 0.000 -0.537 -0.537 7.4919893 11.5927342 7.3853068 7.7864363 2.6816067 10.7935093 0.1791288 -1.4058337 9.0391587 7.9160717 -1.4058337 6.8821796 4.6385373 10.6845870 9.4325599 5.4143216 6.9115562 8.5642497 8.4317717 10.3109632 8.3461228 7.8396964 10.6514586 0.5941663 8.3237646 9.6137344 2.0535632 NA 10.5764244 3.7640701 12.5735689 12.3752985 6.5010346 9.9138159 9.8673566 9.6289427 0.5941663 2.5010314 -0.4058337 7.8157310 8.9800062 9.6275667 10.2963164 -0.4058337 7.8163834 6.6109525 9.0556233 6.0119965 10.2496744 -0.4058337 10.2384507 3.4521210 4.8795440 9.5227139 6.6190065 2.4014939 8.7552755 7.6895410 4.7234275 -0.4058337 13.1250377 0.5941663 10.4317717 NA 9.5592065 3.7640701 6.8933513 8.2014741 13.374017 5.037088 8.363981 11.804663 9.538124 10.278892 13.411127 12.074682 8.480648 10.219853 12.307638 11.474301 9.291980 9.892779 7.524881 8.359016 10.180514 10.8274639 6.6548394 8.2823939 9.7046270 8.2612553 10.2172159 5.1940555 3.8420737 10.9864611 6.3885598 -1.4058337 6.2945840 8.6123024 10.4771688 9.1049080 8.0879990 10.0673421 11.0177850 3.7640701 10.8731681 8.9239401 10.8142197 10.6011710 10.0072427 9.1477730 10.4111274 8.2701009 0.1791288 8.4988987 2.5941424 10.0759432 6.2088528 10.7712518 9.8661903 7.0245967 13.3576570 11.1504103 9.6018718 12.0942387 11.9705405 9.3075303 1.5941663 TCGA-A7-A0D9 37 0 NA 1139 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 1 2 4 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 10.5302092 10.1953710 12.2322545 9.9460498 7.3008385 8.6694641 9.7823583 9.8044458 10.3661962 15.2121323 10.6994199 10.9315258 2.7196435 12.3694550 3.7640276 9.8630207 6.7364452 8.8044460 6.9484560 12.7387069 -0.2803346 14.3172245 5.0234195 9.2391066 11.1149039 5.3343466 0.3046279 7.8097501 9.3840848 1.3046279 7.1459026 7.6325271 2.1790651 4.3045987 10.5438007 9.8864282 9.3814155 10.1215836 10.3598824 12.1857140 6.6083805 10.1872431 15.1273202 8.6906060 10.4573074 11.9593852 11.6078100 2.6265326 7.5745057 9.2144930 11.3592043 1.0415934 11.1664623 5.0050406 4.2114873 4.5009996 10.5022263 11.6345831 10.1999228 12.3168753 13.1021264 8.6220126 11.3248855 10.5549458 11.8049440 11.3603344 5.3778491 11.1783005 11.4021933 -1.2803346 10.1469503 9.7971208 3.5305952 3.9290903 9.7019181 10.7213975 10.2104883 10.3172246 3.3045987 7.2510193 11.9031178 11.3389405 9.9014109 8.9057516 0.00305220 0.00305220 0.00305220 -0.00549140 -0.01900800 -0.00572120 -0.01064600 -0.00802440 -0.00802440 3.65690000 -0.77431000 3.19280000 0.00612280 0.00416320 -0.00830050 -0.01601700 -0.01601700 0.00000000 0.00000000 -0.00843850 0.00527490 3.65690000 -0.70899000 -0.74133000 0.07988000 0.03848900 0.03848900 0.03848900 3.65690000 0.00305220 0.00305220 -0.01087800 0.00346870 -0.00484610 -0.01106000 -0.01064600 -0.01064600 -0.00802440 -0.00802440 -0.00802440 0.75522000 0.73910000 -0.83638000 -0.78975000 -0.78975000 -0.77795000 -0.77795000 0.00416320 0.00416320 -0.00830050 -0.01601700 -0.01601700 -0.01601700 0.00000000 0.00000000 0.00000000 -0.00843850 0.00555290 -0.81570000 0.02706800 -0.76723000 0.04075100 0.00432110 0.04649100 0.03848900 0.00027728 -0.00574930 0.03637000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 -0.767 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.836 -0.836 -0.778 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 -0.767 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.836 -0.836 -0.778 -0.778 0.000 0.000 8.5666949 13.1770184 6.0683656 9.6174829 1.3046279 11.1046910 0.7196654 NA 8.7308648 8.2333651 -1.2803346 7.7299979 2.8895709 10.4522290 9.5116143 1.3046279 7.0683656 9.1718788 8.0256994 8.9945981 8.8990242 7.4845087 10.9186963 0.3046279 9.0313858 9.8104116 3.3634935 -0.2803346 10.7894229 3.6738391 12.8464226 12.4462814 7.9436389 10.4021933 6.9193103 9.3426045 5.0594894 1.3046279 -1.2803346 0.7196654 9.0760895 10.0102324 9.9657843 5.3195493 8.8064504 6.8333797 10.6280302 5.4611029 8.9793809 NA 9.1385442 2.9675560 4.0771917 10.1881291 7.2430816 2.4200781 8.1646525 7.8437590 7.0004080 5.5269921 13.6283585 NA 10.7711864 -1.2803346 8.6068582 4.7857284 8.2607342 8.9734850 14.341871 7.392063 8.850208 12.369455 10.390316 10.484095 12.738707 17.220884 8.995762 10.683256 12.241606 11.103072 9.214493 8.399118 4.077192 6.796454 15.375657 10.569824 5.348994 9.002726 9.489475 8.032520 9.948029 4.243197 10.149044 10.699420 6.145902 2.041558 4.363494 7.257050 11.845858 9.782358 9.168786 8.625025 11.072233 3.673839 12.833293 9.381416 9.711868 9.941225 12.006773 9.585371 10.407451 9.535821 4.111958 8.714260 4.304599 11.166462 7.644450 10.214993 10.502226 6.938806 13.794072 10.789087 10.121584 12.076777 10.389851 9.507540 1.889551 TCGA-A7-A0DA 62 0 NA 1085 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 4 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.682216e-06 4.749757e-07 11.1500157 8.8596118 11.2323953 9.3959514 8.2346010 7.8884255 9.6204922 10.0104710 11.7181660 13.0724322 10.0230547 10.3026985 3.0646759 12.2980081 2.8802545 10.0174756 7.1108174 8.7371013 9.3829929 4.7958604 NA 10.1112544 9.0583503 9.3675506 11.1966359 6.3456323 -0.5792751 9.0592558 9.8990839 4.6302715 10.3213093 7.1790432 -1.5790595 3.1212641 9.7833116 10.2807428 9.2741293 10.0095345 10.0488096 11.6783550 8.1923091 6.1073196 15.4575623 7.8341303 9.0281503 11.0121084 10.5335852 3.5082765 2.4208327 9.3574579 10.0184069 -0.5792751 11.0707496 3.9754101 5.8131373 4.9126738 10.3790101 11.3135524 9.7991147 11.4853942 12.6000292 8.0914761 10.2477656 9.9474609 10.8352409 11.2834572 3.9443806 12.6124189 9.9201675 NA 11.1273159 9.5832112 3.8138222 5.0646759 11.2325959 10.6302732 10.7416204 10.6829147 4.0646759 8.8099134 12.6413493 11.6622072 9.4151732 9.8115263 1.070800 0.916220 1.244700 0.184720 0.169260 -0.263820 -0.691150 0.168050 0.184500 -0.272960 -0.272960 1.644700 0.987010 -0.268170 -0.252610 0.153380 0.153380 -0.236920 -0.236920 1.108000 0.707570 0.767340 -0.291540 -0.291540 0.230240 0.537490 0.521880 0.474260 0.152330 -0.246030 1.070800 -0.766890 -0.270210 0.473750 -0.724230 -0.741680 -0.724110 -0.275830 0.190410 -0.271640 -0.288100 0.391310 -0.271520 0.978530 -0.252730 -0.275950 -0.279290 -0.268170 -0.748980 -0.734680 0.153380 0.470840 -0.744470 -0.236920 -0.045364 -0.047666 0.354630 -0.274160 -0.421120 -0.279770 -0.291540 -0.287030 -0.721280 -0.298270 0.034959 0.707760 0.505330 0.183440 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 0.721 -0.398 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 0.721 -0.398 8.0501762 14.4494166 5.3750151 10.2846189 1.4511715 11.6697851 2.0057952 8.1840323 8.9706046 8.7337028 7.4009597 9.8434470 3.9443806 9.8894439 9.5558878 0.4208327 5.9286143 10.6905309 9.3065163 8.8365617 9.8012971 7.6829145 11.3704642 2.2281722 9.5584515 10.5835259 4.7958604 NA 10.3894867 1.2281722 12.9367044 12.2964732 7.2568701 10.1761248 9.5155573 9.5273828 4.3034593 2.0057952 0.7427823 -1.5790595 7.9384893 9.3426607 8.9226569 4.7246012 9.5260146 6.0057817 10.9904381 6.0501773 9.6699333 6.8088368 12.5145675 3.0646759 5.0355315 10.2573673 5.8308891 2.2281722 8.9384893 7.6056951 4.8802496 10.6457260 13.0509163 1.7427392 10.6529409 NA 10.1177874 6.5857272 8.1055686 9.3239485 13.641992 6.644821 7.773967 12.298008 10.823299 10.841570 4.795860 12.825230 8.565478 10.359297 13.744543 11.582896 9.357458 8.766225 -1.579060 8.447343 11.118005 10.950494 4.778372 9.328462 9.949762 8.015145 10.108257 5.872031 7.437628 10.023055 7.898578 7.366264 8.396668 7.340637 12.780638 10.219697 7.838673 7.946341 8.341173 4.035527 10.904520 9.274129 10.070525 9.710262 11.706078 11.279384 10.244585 9.432746 -1.579060 10.082843 4.253709 11.070750 8.553962 11.286553 10.379010 7.598389 14.509318 10.126020 10.897819 12.741761 10.791507 9.827025 -1.579060 TCGA-A7-A0DB 56 0 NA 1007 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 3 NA 3 1 3 4 3 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.81477e-07 10.3516444 9.7891409 11.8212707 8.9413939 8.1396506 9.0672996 10.4592243 9.2224935 9.4161794 13.2897839 11.1049327 10.1099438 4.3440118 13.0371670 3.6604837 10.1114437 6.2085446 8.1337577 9.4670565 12.7959975 0.6160753 13.5111429 8.4910698 9.5821900 10.5597021 7.1474695 NA 12.2118447 8.8734761 3.3709733 8.1079415 6.8352571 -1.3838305 3.0755155 9.6515748 9.9675798 10.1312955 10.0062573 10.1716362 11.6287129 1.2010692 11.2765300 14.1535495 7.2023648 9.8527005 11.3941655 10.8808242 4.5933657 4.2010535 8.7709067 12.2137918 NA 9.8758317 5.8544919 5.9470045 5.8352571 10.3579766 11.6698446 11.0548802 11.9471453 12.5777189 8.4833672 10.8866757 10.5663855 11.1610528 10.7950644 4.6821800 12.1469824 10.7369742 -1.3838305 10.1029234 8.6047730 3.9018613 5.1859458 10.8598575 10.0836939 9.8273683 9.6556930 2.8640177 9.1591203 12.8385060 13.6538069 10.3953974 9.4402517 -0.0182120 1.3420000 1.3420000 0.5781000 0.5781000 -0.0262920 0.6411500 -0.0225950 -0.0225950 -0.0157300 -0.0157300 -0.0157300 0.0000000 0.0023697 -0.0101840 -0.0101840 -0.0101840 -0.0150420 -0.0150420 -0.0111860 0.6597800 0.0135040 0.0089037 0.0089037 0.0089037 0.6188200 0.6755000 0.6304500 0.6967200 0.0249810 -0.0182120 -0.0052494 0.5781000 -0.0262920 -0.0279690 0.6411500 0.6411500 -0.0225950 -0.0225950 -0.0157300 0.6544200 0.6451600 -0.0157300 0.3007600 0.3007600 0.3007600 0.3007600 0.0023697 0.0023697 -0.0091308 -0.0101840 -0.0101840 -0.0101840 -0.0150420 -0.0150420 -0.0150420 -0.0177180 0.6597800 0.0135040 -0.6776500 0.0089037 0.0089037 -0.0037279 0.6188200 0.6304500 0.7385400 -0.0096690 -0.6553700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 0.187 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 0.187 8.3491038 12.9062513 8.1435654 9.9637098 3.1396496 10.2071432 -0.3838305 0.9380223 8.9049546 8.6019305 NA 7.8377724 3.9014945 10.1054346 9.0662687 1.2010692 8.4740693 9.2876295 11.3071776 10.6143262 9.7280848 7.7935077 10.5750036 2.7035437 9.8059130 9.2920455 2.7860108 NA 10.3495275 2.5229848 13.0592262 12.1774957 7.7035513 10.1706772 7.3130562 9.6167927 3.3165223 2.7860108 0.6160753 8.3925214 9.7447272 9.6433034 11.1438097 6.8497078 7.8230538 6.7193765 10.3647006 5.9648168 9.3801307 -1.3838305 11.9743275 2.0755326 3.6160871 10.1050933 7.8329311 1.9380223 9.2832000 8.2160013 6.2743008 2.3165223 13.8994662 0.9380223 10.0887792 NA 7.8991768 4.4489802 7.7008967 9.3676325 12.514406 6.259945 8.133758 13.037167 9.986231 11.251353 12.795997 12.430771 9.034995 10.556035 13.276586 9.364281 8.770907 9.610442 -1.383831 6.735029 11.626966 11.060586 6.309575 8.826760 8.925565 7.955938 10.385439 5.947004 5.461578 11.104933 6.593369 2.786011 3.973639 6.431728 10.114439 10.557136 7.564456 8.423443 12.442736 4.170678 11.093260 10.131295 10.637415 9.946445 10.693238 9.519970 10.801893 9.340602 NA 9.350857 4.201054 9.875832 6.924428 9.738658 10.357977 7.470957 14.141242 10.144543 10.802512 12.432772 10.476011 9.756918 2.316522 TCGA-A7-A0DC 63 0 NA 906 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 NA 3 5 NA NA 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-08 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.3001600 -0.3001600 -0.3001600 0.0020241 0.0000000 0.0092186 0.2276400 0.2256100 0.2371000 3.1330000 1.1320000 2.1838000 -0.0085766 -0.0085766 0.7294300 3.6569000 1.0022000 0.2157600 0.2157600 -0.7890800 0.0104240 -0.2801300 0.1790500 0.1790500 0.1790500 0.1305100 0.1305100 0.1392400 2.1116000 -0.3001600 -0.3001600 -0.2546500 0.0020241 0.0092186 0.0120970 0.2334900 0.2334900 0.2256100 0.2371000 0.2371000 -0.2882200 -0.2882200 -0.8931800 -0.2727200 -0.2727200 -0.2749700 -0.2800300 -0.0085766 -0.0085766 0.7294300 -0.9351900 -0.8637000 -0.8637000 0.2157600 0.2157600 0.2157600 -0.7890800 0.0104240 -0.2801300 -0.8733800 0.1790500 0.1790500 0.0083351 0.1305100 0.1392400 1.0026000 0.2103900 0.1431000 0.000 0.000 0.188 -0.854 0.216 0.216 -0.789 0.000 -0.280 1.514 0.641 0.179 0.179 0.000 0.000 0.131 0.131 -0.300 -0.300 1.003 2.112 0.210 0.143 -0.205 -0.205 0.000 0.000 0.000 0.000 0.233 0.233 0.237 0.237 -0.288 -0.288 1.310 2.176 -0.273 -0.273 0.000 0.000 0.000 0.000 0.188 -0.854 0.216 0.216 -0.789 0.000 -0.280 1.514 0.641 0.179 0.179 0.000 0.000 0.131 0.131 -0.300 -0.300 1.003 2.112 0.210 0.143 -0.205 -0.205 0.000 0.000 0.000 0.000 0.233 0.233 0.237 0.237 -0.288 -0.288 1.310 2.176 -0.273 -0.273 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-A7-A13D 46 0 NA 965 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 5 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.150143e-06 6.242351e-07 9.3094945 9.1442952 11.4633206 9.4890341 8.7488027 8.3002285 9.9333361 9.5989171 11.9265774 13.2785705 9.6932542 10.1669021 0.2852246 13.3656517 2.2852838 10.9197868 5.6661004 8.8889046 9.8645941 7.4849509 1.0222613 10.1422225 9.8513323 9.3585273 10.1102370 4.8702414 1.5076678 7.1181687 11.1294609 2.5076678 9.3806753 9.4350253 -1.2997379 4.3441752 9.0401659 10.3214518 9.1689398 9.4742791 8.8538678 11.2128093 -0.2997379 9.0786106 15.7297647 8.3074609 9.8270201 10.8169846 10.5951335 3.2852838 1.0222613 8.9799264 10.1070523 1.0222613 9.8107991 5.0040968 3.7447101 5.3296726 9.5180988 11.9036637 9.5324146 12.0315126 12.9259751 7.7528837 10.5383378 10.0977872 11.0443342 10.5359715 5.2852764 11.6277234 9.5752970 NA 11.0029546 9.3656516 3.4013164 3.7447101 8.7864520 10.1976686 10.8586099 9.6939619 3.3441752 6.8702402 13.1036607 12.8014707 10.1365067 10.0340301 0.388990 1.621800 1.409800 -0.173480 0.501340 -0.199500 1.581600 0.408780 -0.195410 -0.585300 -0.146050 2.619700 1.292300 -0.228100 -0.228590 -0.233490 -0.187350 0.243890 -0.200870 0.221450 -0.152080 -0.247430 -0.134840 1.222500 -0.193150 -0.353050 1.507200 0.747270 0.668080 0.067375 0.388990 -0.077745 -0.167900 -0.339980 0.222530 -0.472680 -0.364880 0.408780 -0.158600 -0.210570 0.692040 0.716970 -0.661550 -0.176120 -0.155790 -0.182440 -0.212180 0.438510 0.246380 -0.213540 -0.226250 -0.185210 -0.221580 0.243890 -0.203610 -0.233980 -0.160640 -0.164720 -0.195250 -0.199250 -0.165740 -0.168280 -0.183950 -0.467220 0.827250 0.683100 0.630070 0.026233 0.955 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.163 -0.163 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.000 0.000 0.955 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.163 -0.163 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.000 0.000 7.1961703 13.5657107 5.4007565 9.0278684 2.7003065 10.4510227 -1.2997379 5.9194831 9.4552033 8.3223676 7.1139432 10.3113405 7.1349437 10.9351331 8.8727432 3.4552023 4.2549039 11.3892216 5.5582983 10.2006597 8.7920950 7.6011824 12.1247445 0.5682267 8.2179853 10.1453306 0.7003509 -1.2997379 10.2620810 3.5582921 12.3436083 13.0794233 7.3076462 9.6057027 9.7983479 10.5879172 3.9857190 3.2238704 1.0222613 -0.2997379 7.8576626 9.4154198 8.2510624 6.3868161 9.7094795 6.1921685 9.5068653 5.9194831 10.5403068 3.4552023 11.4963553 2.9482457 4.7664043 10.1682423 7.1398971 1.7003065 10.8823997 7.9339355 3.9097731 3.6072119 13.0430849 1.5076678 11.0273069 NA 9.8620775 4.6545100 8.3094945 8.0446116 11.255830 9.801635 7.455203 13.365652 9.628094 11.086987 7.484951 10.376714 8.572221 10.691838 13.232611 11.705589 8.979926 8.816660 1.022261 7.689001 11.376714 10.9212986 5.2701701 8.7717780 8.6369537 8.4816755 9.7162604 3.4552023 7.7254556 9.6932542 10.5614026 -0.2997379 7.9949366 8.4920158 13.1582096 10.3894401 6.6855884 9.4367176 8.6530572 2.9482457 10.7830403 9.1689398 9.5882979 9.0435014 11.5218904 11.5004067 10.3364871 8.8244369 NA 8.9625516 2.7877877 9.8107991 7.5332059 10.1556430 9.5180988 7.7087446 13.7689261 10.3731830 9.6861577 14.2839274 11.0963853 9.0677304 -1.2997379 TCGA-A7-A13E 62 1 614 326 breast stage iib t2 n1 mx female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 2 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 5.548757e-07 10.7163928 9.5045803 11.9284960 10.3559658 8.7610977 7.9246979 10.3569057 10.2359373 11.2764871 12.1679471 11.3774294 10.3178602 2.7724136 13.0550670 1.0943712 9.0875626 5.9016948 8.4745857 9.1818040 1.3573831 NA 4.7496952 11.6815560 9.6841271 10.9126036 2.6793112 -1.2276920 8.0807520 9.9769841 1.5797594 9.4606633 5.5668273 NA 3.2318471 8.6210357 10.8835486 9.3018435 9.4297314 9.4658998 11.8565570 3.2959728 9.6603951 14.2420230 7.3909454 9.4780454 11.8442105 10.9677851 3.7266133 -0.2275231 9.6108290 11.0988424 0.7723924 10.7149275 4.5797655 5.8704461 5.9818663 10.1211411 11.4630657 9.8525643 11.4379709 12.3365624 7.9964147 11.8732395 11.6244430 10.5517219 11.2640155 3.9818618 11.5185073 5.8058367 4.9423362 9.5749293 9.6838049 2.9503378 5.0203422 10.7853866 10.3246017 10.7327769 9.8997625 3.3573690 9.3935490 13.4024525 10.9297599 9.4457219 9.3270017 0.55886000 0.90070000 0.90070000 0.01505000 -0.00387790 -0.00498440 0.41212000 0.02906500 0.03016900 0.82236000 0.82236000 0.88686000 2.33880000 -0.48439000 -0.48963000 -0.48963000 2.93690000 0.83962000 -0.48554000 -0.00221680 -0.49638000 -0.49819000 0.00000000 0.00000000 0.00000000 0.41999000 0.41028000 -0.50795000 0.44088000 0.03679400 -0.47628000 -0.48502000 0.00213950 -0.53068000 -0.01340200 -0.50546000 -0.50546000 0.02906500 0.03016900 0.03016900 0.46443000 0.49431000 -1.07300000 0.78987000 0.78987000 -0.02219500 1.85010000 -0.48439000 -0.48439000 -0.48963000 -0.48963000 -0.49621000 -0.49621000 0.83962000 -1.29290000 -0.49361000 -0.47955000 -0.48722000 -0.49819000 0.00027728 -0.01037000 0.00000000 0.86553000 -0.49454000 -0.49099000 0.41949000 0.44524000 -0.50978000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 0.000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 0.000 6.6853025 12.8517310 1.0943712 8.1604301 3.9818618 10.3540843 1.0943712 NA 8.7695923 6.6303938 6.3573761 8.6288385 6.5603160 9.7674734 9.5668289 2.5797594 5.3422703 10.9363771 5.6793027 8.5909953 8.8481059 7.3834373 10.5314689 -0.4619585 10.1272133 10.4243616 2.2318317 NA 9.6897850 2.4728516 12.4958606 12.7650858 5.9119648 10.0949045 9.1934258 12.9099645 1.0943712 1.3573831 NA 1.0943712 11.4232403 9.1711565 8.3460602 3.1647380 8.6780557 6.1211418 10.5201863 9.9554279 9.8337841 0.3573831 14.2885438 1.9423456 3.7724136 10.5819922 8.6248177 4.6053047 7.6702583 7.4341912 4.9818663 12.1744923 13.2453576 -0.2275231 11.1255597 NA 9.0601252 4.2642662 7.4797722 7.6272814 13.759527 7.020340 8.790613 13.055067 10.258987 11.351021 1.357383 11.092085 10.706491 11.708867 13.301538 12.632918 9.610829 7.822262 3.772414 8.443069 11.191320 10.7291521 6.1299650 8.0485376 8.9572884 8.8651700 11.3006399 4.2959728 4.5003304 11.3774294 5.5668273 -0.2275231 10.1855119 8.8162605 13.8711853 9.0566586 7.6365992 8.1711568 8.3797431 4.2318471 10.8973226 9.3018435 9.9246978 9.5364551 12.5486403 13.8648810 10.5011837 9.1507077 NA 9.2554325 4.9016972 10.7149275 6.5989621 12.2504393 10.1211411 7.4763169 13.4304570 10.5214443 9.6979673 12.0824576 11.0069310 9.6005495 -0.2275231 TCGA-A7-A13F 44 0 NA 765 breast stage iiia t3 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 3 1 1 3 3 5 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 9.6957804 9.6344101 11.2232555 8.7646719 8.8525264 8.4337235 9.2499082 10.0414063 10.5805651 14.7712135 7.7145217 10.8262805 1.0057593 13.4663918 2.7713151 7.7364222 5.5907457 7.6639935 9.4395764 12.5625758 1.0057593 13.6378688 3.0761657 9.9500551 10.5948716 7.3877580 0.2687937 8.8956816 9.0057823 1.2687937 7.6838543 7.2874806 NA 4.8933088 9.9311884 10.0990678 10.1636346 10.9186717 9.1027610 11.1777097 2.7713151 10.8981734 15.4996628 7.6491189 9.7479234 11.4723687 11.4705323 4.4117720 4.9317823 7.9198686 11.5393068 NA 10.8890366 5.0237034 5.0588922 5.0414051 9.9186717 11.5365788 10.3968111 11.9210642 12.6299381 8.9830623 10.8198841 10.0783170 11.6349568 10.4307884 4.9506410 11.2962620 11.6269185 -0.3161688 10.2398812 9.2201014 2.1432955 5.1595888 10.9576498 9.5664972 10.2336390 9.8926982 0.6838312 9.6696961 13.5495392 12.2470505 10.1580672 9.0825980 0.218990 0.896060 1.002600 0.205090 0.226630 -0.158600 0.230550 0.206410 -0.611140 0.619740 0.619740 0.629160 -0.235170 -0.202730 -0.190990 -0.215770 -0.215770 0.165200 0.209930 -0.613350 -0.576670 0.578980 0.529410 0.529410 0.529410 0.097252 0.097252 0.097252 3.656900 -0.724560 0.218990 -0.182820 0.205090 -0.259980 -0.158600 0.230550 0.230550 0.206410 -0.611140 -0.653990 0.220310 0.207570 0.611720 -0.205850 -0.205850 -0.205850 -0.238150 -0.202730 -0.236060 -0.227660 -0.215770 -0.215770 -0.215770 0.209930 0.209930 0.209930 -0.613350 -0.654770 0.592880 -0.250830 -0.285130 0.529410 -0.214380 0.097252 0.097252 -0.250790 0.202740 0.150040 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 0.000 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 0.000 8.1309376 12.8016597 5.7282471 9.4244783 2.2760202 10.9961700 0.2687937 -1.3161688 8.6725388 6.9222585 NA 7.5869831 5.9784748 10.4968337 9.1330029 4.7713151 6.8437251 9.2659964 9.0125293 10.8653171 10.2420453 7.4684888 10.7589991 3.3842985 8.8027952 9.9790491 2.5907457 -0.3161688 10.4092206 2.1432955 12.5923407 12.2986791 7.5695503 9.7145213 6.5603711 9.5832112 5.7713178 1.2687937 NA 1.4911861 8.9796233 9.5088131 10.5100054 5.0932432 8.6604613 6.7818869 9.8575313 6.3059067 9.9447738 NA 8.9956027 1.0057593 3.5907457 9.6407603 8.7661230 1.6838761 8.7404918 7.3059058 5.1101210 1.2687937 13.6370958 1.4911861 10.4766446 NA 8.8525264 5.3420640 7.5786723 7.9246457 12.0914925 7.1595878 8.7526325 13.4663918 9.2846964 11.2000467 12.5625758 12.0557670 9.1876799 10.6725389 12.6307605 10.9570671 7.9198686 7.0588933 0.2687937 7.6056951 13.2732128 10.6431318 6.6263690 8.5771557 7.7391366 10.5344318 9.5876532 5.4253217 7.5907450 7.7145217 5.7818869 2.4912118 4.9506410 8.3749521 10.5187203 8.0588939 7.4815161 8.3527391 12.5937473 3.2074087 10.0383736 10.1636346 9.3411728 10.0203608 9.7296139 9.6234334 10.8893420 9.1247233 NA 9.1760579 3.8537761 10.8890366 5.5907457 9.8393051 9.9186717 7.0331135 13.5135770 9.6467502 10.1747051 12.7955605 10.8515860 8.8786110 -0.3161688 TCGA-A7-A13G 79 0 NA 718 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 11.6094114 10.3016382 11.8994601 10.2942381 8.5489020 9.6334354 11.6586274 9.0263112 10.0296572 13.2047718 10.9935598 10.3524020 4.3154141 13.0339215 4.3727432 8.3251269 7.9977423 8.2696078 12.4978061 12.9947016 4.5653900 13.3794626 8.7040108 9.9650388 11.2130119 8.9028092 -0.8940538 7.0248216 9.0300284 1.2759010 7.9639393 6.2858682 NA 3.2352369 10.3416735 10.1513767 11.5858649 11.4168551 10.3774214 10.9897471 0.4279279 12.0700284 14.4300861 9.0019728 10.3428575 11.9886969 11.5391526 4.0366967 7.1448774 8.7443942 12.3302616 -1.8937857 10.9828589 2.5653778 4.6295198 4.2758861 10.4480331 11.9689830 10.5902778 11.5478651 13.2001598 8.0068254 10.6045582 10.5489070 11.5437104 11.2761964 5.5068368 11.6169697 10.4040209 -0.8940538 10.1496693 8.9809398 4.0606181 3.8608436 10.3701077 10.2774479 10.1841092 9.9072625 1.9133011 5.3347756 12.0562409 10.6866880 10.2920725 9.5912845 -0.00743570 1.72690000 1.75240000 0.00277450 -0.00346270 0.00430210 -0.00055444 -0.00235530 -0.00235530 -0.00415460 -0.00415460 -0.00415460 0.00000000 0.00000000 0.00346870 0.00346870 0.00346870 -0.00138580 -0.00138580 0.00444110 0.00240510 -0.00180140 -0.00526100 -0.00526100 -0.00526100 -0.00221680 -0.00221680 -0.00221680 0.00319100 -0.00290910 -0.00743570 0.00277450 0.00277450 0.00430210 0.00260040 -0.00055444 -0.00055444 -0.00235530 -0.00235530 -0.00235530 -0.93585000 -0.91883000 0.01544700 -0.00290910 -0.00290910 -0.00290910 -0.00290910 0.00000000 0.02146300 0.00346870 0.00346870 0.00346870 0.00346870 -0.00138580 -0.00138580 -0.00138580 0.00444110 0.00240510 -0.00180140 -0.90510000 -0.00526100 -0.00526100 0.00763920 -0.00221680 -0.00221680 0.00319100 0.01265500 0.00791750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 0.699 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 0.699 0.000 0.000 0.000 0.000 0.000 0.000 7.8029260 12.3165536 3.1059630 9.4091684 4.0601512 10.5707593 0.9133394 -0.3090019 7.3154114 6.7641696 NA 6.5792993 2.0128547 10.4632354 9.4826265 0.9133394 6.2455090 9.0359565 9.9623839 10.3529958 9.7972612 8.5121633 9.9253392 2.9133203 9.6734391 9.7516169 1.6909087 NA 9.9627728 3.0128547 12.6494131 12.1367117 6.7169827 9.9376614 6.6984158 8.9490942 5.9639388 2.1934248 0.6909087 3.6909199 8.9954622 9.4744648 10.9145204 2.8608436 8.5144896 6.1774215 10.2777606 5.2557047 9.3739155 NA 13.3607655 3.5978172 4.5816947 8.6270286 6.4372777 0.1059462 9.0396489 6.5937989 3.4278877 -1.8937857 13.8114557 -0.8940538 10.1108810 0.4279279 8.6480228 4.4982764 7.8625146 9.3867291 13.6924569 3.9886029 8.5551071 13.0339215 10.6405044 11.2791670 12.9947016 13.4755557 9.5524524 10.8176253 13.2443901 7.5633389 8.7443942 8.8055308 0.1059462 7.5025629 11.5305183 11.032810 8.117185 9.131098 8.938057 8.752517 10.030444 5.847426 8.020343 10.993560 5.295782 8.526971 3.463505 5.912734 9.700283 10.304710 8.552948 8.416571 13.488245 2.913320 12.895467 11.585865 10.274004 10.004938 12.183191 8.902809 10.712132 9.571525 -1.893786 9.617632 2.193425 10.982859 6.325127 10.847590 10.448033 8.344470 13.926709 10.563852 10.500421 13.039280 9.594803 10.532747 1.565402 TCGA-A7-A13H 61 0 NA 899 breast stage iib t2 n1a mx female 2010 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 6.935946e-08 10.0524446 9.2246727 12.1043057 9.2271810 8.4316815 9.1205870 11.1203622 9.3458035 10.5402269 10.0272378 11.8390410 10.3338277 1.2804813 13.5809996 2.5605927 10.2095306 6.6279468 8.5405632 10.1451119 12.8344556 3.0580913 13.8038705 8.0315496 9.3321120 10.5773997 6.6126798 NA 13.0413859 8.8129785 0.7950188 8.8295807 7.1097534 -1.5269924 4.9488625 9.8018036 9.9376744 9.1543670 11.2551030 10.1539277 11.1585345 -1.5269924 11.7421092 14.5330223 8.2052791 10.2107986 10.6069131 10.8182566 4.7769094 6.2869107 8.5894725 11.0806902 NA 9.4171086 6.3800194 6.9609692 5.4156438 9.9009652 11.8099141 10.8138133 12.2609292 12.6996161 8.9559367 10.6174683 10.7152012 11.1526088 11.3471495 5.2145950 11.8659827 11.7106374 -1.5269924 10.4892405 8.7387439 4.4843573 5.7492527 10.5270545 10.3056231 10.3971989 9.4850546 5.0878404 10.2820928 13.4875415 12.7973092 10.2988825 10.5099891 0.00917050 0.83962000 0.84041000 0.42385000 -0.00705760 -0.00069303 -0.00387790 -0.00290910 -0.00290910 0.00763920 0.00763920 0.00763920 0.00374650 0.00073819 0.01377200 0.01377200 -0.44405000 -0.01050800 -0.01050800 -0.00138580 0.00663030 0.00847430 0.46553000 0.01430400 0.01430400 0.01880300 0.01880300 0.01880300 0.03369000 0.00917050 0.00917050 0.00430210 0.01656500 -0.00069303 -0.00972740 -0.00387790 -0.00387790 -0.00290910 -0.00290910 -0.00290910 -0.00512270 -0.00512270 0.01349200 0.00263570 0.00263570 0.00263570 0.00263570 -0.87984000 0.01126100 0.01377200 0.01377200 -0.44405000 -0.44405000 -0.01050800 -0.01050800 -0.43637000 -0.00138580 0.00663030 -0.44307000 -0.42963000 -0.44028000 0.01430400 0.01826500 0.03031000 0.01880300 0.02035400 -0.03473100 -0.41630000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.840 0.840 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.840 0.840 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4461084 13.0941503 8.2196429 10.1587534 5.9959842 11.3448414 1.6430712 1.7950604 8.9067142 8.2296850 1.0581086 7.4561219 3.6024094 9.5512795 10.0093759 1.4731115 9.3837715 9.5338246 10.9266565 10.2788726 10.2162548 7.7700447 11.0855365 2.7950604 10.1070321 10.0702500 5.5065512 -1.5269924 11.1264216 4.1169885 11.8936153 12.1173229 8.1822126 10.0924316 9.1259736 9.2740286 4.8481672 2.9966961 -0.5267846 6.0655852 9.4396341 9.6660379 10.0730415 5.5392178 8.8675379 6.3679459 9.8611460 5.1596292 9.4717191 0.4731115 11.4121568 2.7950604 4.6228777 9.3879921 6.5444297 6.0429835 10.0425096 9.4808568 8.6983362 NA 13.2487904 0.4731115 10.3732407 -1.5269924 7.7043498 5.7210554 7.4127079 8.7871454 13.220567 5.027716 8.621605 13.581000 10.482607 10.399054 12.834456 12.666500 8.411238 10.531120 13.135129 10.676783 8.589473 9.004510 1.473112 7.283701 11.246680 11.4351209 6.3800194 8.9376745 8.4996522 7.5868706 10.9538356 7.9305097 7.0915137 11.8390410 7.0391823 0.7950188 8.2724105 6.8238907 10.6511710 10.8006813 7.9927650 9.0238755 11.6141182 7.0277180 11.2099513 9.1543670 10.5718188 10.2458556 11.2491504 10.2929086 10.6798378 8.0142253 NA 9.4324352 7.4532682 9.4171086 5.4156438 11.2380334 9.9009652 7.2869735 13.5120905 10.0069451 10.0557411 12.6063512 11.4253239 10.0453552 1.2804813 TCGA-A7-A26E 71 0 NA 954 breast stage iiia t3 n1a mx female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 10.827419 10.810458 12.244878 10.729764 8.137793 9.605237 10.851456 9.740772 8.778328 12.524596 10.695763 10.815780 1.086580 13.001950 4.730439 9.080230 5.932073 8.783552 9.724567 13.490228 NA 13.481616 8.055251 9.060998 11.401309 8.721395 NA 7.782874 8.665900 3.730444 8.340431 8.073848 -1.913216 4.981401 10.758567 11.283032 11.197720 13.293522 11.376891 12.644466 1.787014 12.241323 13.909055 9.203058 9.838960 11.899563 12.013251 5.708637 5.602285 9.694839 13.172015 -1.913216 11.694492 4.814504 6.158046 4.086580 11.067616 11.974281 10.655015 12.541654 13.586679 8.347504 11.375306 11.299712 12.076599 11.827313 5.656439 12.662360 10.821294 NA 10.365033 9.034951 3.646070 5.780071 10.542682 10.626227 9.607694 10.408512 3.334511 9.896754 13.626742 11.722642 10.789190 9.342203 -0.24588000 0.43831000 0.41806000 0.04223800 -0.00076094 -0.01736600 0.06072400 0.05316700 -0.00512060 0.02331400 0.02331400 0.05018100 -0.25691000 -0.25691000 -0.66457000 -0.66457000 -0.65968000 0.13576000 0.02882300 -0.06671900 -0.09029300 -0.23367000 -0.20641000 -0.20641000 -0.20641000 0.11836000 0.11836000 0.11836000 -0.18754000 -0.24588000 -0.24588000 0.04153000 0.04223800 0.05146000 -0.01736600 0.01727500 0.02055400 0.05316700 0.01180000 0.00145750 0.03658400 0.02964200 0.02331400 0.06001000 0.06001000 0.06001000 0.06001000 -0.25691000 -0.25691000 -0.66457000 -0.66457000 -0.67846000 -0.66730000 0.02882300 0.00740760 0.08746400 -0.12576000 -0.09029300 -0.23367000 -0.64842000 -0.20641000 -0.20641000 -0.09901000 0.11836000 0.11836000 -0.22487000 -0.08764400 -0.62155000 -0.257 -0.257 -0.665 -0.665 0.000 0.000 -0.126 0.000 -0.234 0.139 -0.509 -0.206 -0.206 0.000 0.000 0.118 0.118 0.172 0.418 -0.225 -0.225 0.000 -0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.257 -0.257 -0.665 -0.665 0.000 0.000 -0.126 0.000 -0.234 0.139 -0.509 -0.206 -0.206 0.000 0.000 0.118 0.118 0.172 0.418 -0.225 -0.225 0.000 -0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.84063632 12.47836458 7.02322208 9.69206342 2.64177721 10.87754327 1.54601778 -0.32843487 7.72501990 7.30817154 -0.32843487 9.42267768 0.08664791 10.29298783 9.27455450 NA 9.27083936 9.40907542 12.06081929 9.19967504 10.14707045 8.69483876 10.13677277 4.64117028 7.39492308 9.18000162 2.73044432 NA 9.64452617 3.08657998 11.89192478 11.66978431 8.43531230 10.74412577 8.11172359 8.89474381 6.04078067 0.08664791 1.25652763 -1.91321623 8.57643182 7.25149093 10.71137944 4.73043889 8.78649476 4.54601778 9.98367313 7.32975778 9.39549172 NA 11.85941400 2.47889417 4.84147000 10.05791918 5.39173336 2.40852166 9.26711486 8.08517446 4.37198394 NA 13.67442007 0.40849449 9.71502951 NA 8.04803342 5.28625649 8.54293822 8.21586688 12.0909853 4.9569488 8.6402131 13.0019499 10.5605433 10.5769334 13.4902285 13.0471290 8.8899079 11.5497251 13.5238809 9.1905275 9.6948388 9.1493048 0.4084945 7.2590116 11.9545383 11.1369428 8.0879921 9.2887078 8.8704008 8.6994524 11.0012774 6.3345111 7.5107499 10.6957627 6.4659630 4.4959765 7.1282429 6.7335740 11.2470857 10.9893359 8.5643423 6.9904659 13.6249548 4.7304389 12.0761869 11.1977196 10.4336516 8.8963521 12.3091525 9.2325161 10.9692270 9.5191259 -0.3284349 8.4508830 3.9194736 11.6944922 7.4659622 10.1829697 11.0676160 7.3486786 13.5480634 9.7839860 10.1438988 13.1823106 9.9115427 10.0904532 1.4084945 TCGA-A7-A26F 55 0 NA 738 breast stage ia t1 n0 m0 female 2010 NA yes other specify 0 white not hispanic or latino NA NA 2 5 NA NA 2 5 1 6 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 2.774378e-07 10.5805468 10.7985023 11.3800473 10.3367986 7.2291053 9.1269460 8.6360928 10.4718327 10.2245109 13.6757614 10.0090047 10.6410575 1.9321746 11.9364097 2.8863941 10.9692213 5.2631058 8.8163597 8.4723172 11.2642258 NA 10.2586187 7.1942841 8.5706250 11.7782672 6.3751333 -2.0679388 8.7674502 11.1847068 3.2541102 7.6702816 9.6757614 -2.0679388 5.9656112 10.6105693 10.8653266 9.9314847 11.1903135 10.2706470 12.3960329 2.2541102 8.3148134 14.9937819 8.7727154 9.6208767 11.2834045 11.4247935 3.4240487 0.7395025 9.3191295 14.5195859 -2.0679388 10.9986148 6.2222076 8.0666156 4.7135474 11.6373896 11.8363534 10.8847485 12.1990489 12.8030837 5.7839385 10.9455119 10.3601096 11.7417564 11.1173744 5.3916200 11.9840779 8.6515781 -0.4827747 10.6763923 9.7654746 2.6945459 6.2359702 11.3386600 10.8437685 9.8484419 10.2385357 2.5171497 8.3875163 13.3117030 12.6635082 9.6160610 10.2957765 0.2307200 0.2307200 0.0938870 0.1333300 -0.2398400 -0.0959030 0.0279290 -0.0309400 -0.0309400 0.1885200 0.4285700 0.4285700 1.3281000 0.0221610 0.2744300 0.2744300 0.2744300 -0.0732000 -0.0732000 0.3438900 -0.0441350 -0.2538100 -0.2617000 -0.2617000 -0.2516300 -0.0107740 -0.0107740 -0.0107740 0.0255410 -0.2920000 0.2307200 -0.2902200 -0.2578000 -0.0959030 -0.0959030 0.0279290 0.0279290 -0.0309400 -0.0309400 -0.0309400 0.4939100 0.4939100 0.1885200 -0.0679840 -0.0679840 -0.0679840 -0.0679840 0.0221610 0.0975530 -0.3035600 0.2744300 0.2744300 0.2744300 -0.0732000 -0.4435000 -0.1035400 0.3438900 -0.0441350 0.0167150 -0.0279350 -0.2617000 -0.2617000 -0.2995600 -0.0107740 -0.0107740 -0.1530100 -0.0749350 -0.0095329 0.000 0.000 0.274 0.274 0.000 0.000 0.344 0.000 -0.254 0.000 0.000 -0.262 -0.262 -0.300 -0.300 0.000 0.000 0.137 0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.189 0.429 0.000 0.000 0.000 0.000 0.000 0.000 0.274 0.274 0.000 0.000 0.344 0.000 -0.254 0.000 0.000 -0.262 -0.262 -0.300 -0.300 0.000 0.000 0.137 0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.189 0.429 0.000 0.000 0.000 0.000 8.5939673 13.4118748 5.1513596 8.9022952 2.6326405 10.5697198 1.1021206 7.7217226 8.9663004 9.9992874 NA 8.7170447 8.6169377 10.9183868 9.2507321 2.5171497 5.4944316 9.6887455 8.4230403 7.5651844 10.0672731 7.5190292 11.7166196 3.3584525 8.1083624 9.6588331 0.5171245 NA 10.0103400 2.6870831 12.7741957 11.9935604 8.9144697 10.3634256 11.5793103 9.3072286 4.5760444 3.1416453 -0.4827747 -0.4827747 8.0063306 8.7217230 7.6987179 1.9321746 9.0132666 5.5975252 9.6643566 5.9265427 8.7792466 6.5096183 10.2282451 5.3245082 4.5171497 10.7096356 5.9554453 7.7587376 10.3444944 8.9080371 7.9806760 10.0695007 13.2256968 0.7395025 10.4550159 NA 10.2990578 4.1610089 8.2831282 8.8428318 11.764673 8.134313 8.843581 11.936410 10.322713 10.340254 11.264226 9.695402 9.737933 11.380047 13.538826 10.463327 9.319129 7.944814 2.739546 7.294133 11.270508 11.529194 6.557899 9.699546 8.829278 9.259180 10.115099 7.599301 5.597525 10.009005 7.855517 1.254110 5.112100 8.396776 13.446379 10.321821 8.118304 7.556071 11.081778 8.128176 11.370040 9.931485 9.706153 9.477154 11.795020 9.682059 10.760722 10.160106 9.380305 10.360023 8.644716 10.998615 8.587720 10.352939 11.637390 7.975216 13.871331 9.873970 10.559267 12.931485 10.418018 10.074934 4.272038 TCGA-A7-A26G 50 0 NA 722 breast stage iia t2 n0 (i+) m0 female 2010 NA no other specify 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 2 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 5.201959e-07 10.6569336 10.4491459 11.5515231 10.0692774 8.5373730 9.4037979 8.9766581 10.8548290 10.2318304 12.0633828 9.9320680 10.8119671 0.1311944 10.0007619 3.6547334 9.4898193 4.6703248 8.7614352 10.3560741 9.7987232 NA 9.9600980 2.3010901 8.3450499 11.1129137 5.2186301 0.4531224 11.6369437 9.8324745 2.7750295 7.6290200 10.1027117 -1.8688056 6.5574331 10.3488229 10.4821072 9.3773149 10.2419776 10.2639891 11.4161367 2.7161349 7.3979544 14.8701443 8.5666611 8.7875928 11.1747081 10.9461510 4.6230240 NA 10.1938889 12.1053137 NA 11.2813913 6.2396921 7.9026573 5.2910399 11.1861115 11.6918591 9.3950240 12.7494962 13.4287292 7.1999461 11.2807564 10.8804677 11.4717136 11.5018555 5.7161294 12.5484932 9.5304459 4.4887207 10.0061495 10.2941887 2.5269202 6.4165695 11.1813568 10.7918325 10.8307405 10.9650464 2.8860623 7.7587023 12.8732669 12.4796888 10.1287004 9.8522673 0.0207630 0.0207630 0.2334900 -0.0040162 0.2616900 -0.2060200 0.0818990 0.0868500 0.0300290 -0.3092100 -0.3092100 0.4648500 0.7372000 0.1625000 0.3512000 0.3690400 0.3690400 -0.0604430 -0.0604430 -0.0553640 -0.3047500 -0.1850900 -0.1748700 -0.1748700 -0.1748700 0.0622230 0.0622230 0.0622230 0.1992300 -0.0499770 0.0207630 0.0278480 0.0451630 -0.2060200 -0.2599800 -0.2930700 -0.3026300 0.3001100 0.0300290 -0.0203890 0.0556580 -0.3226300 -0.3388300 -0.2633600 -0.3033400 0.4439200 0.0000000 -0.2961500 0.1992300 0.3590400 0.3690400 0.3013800 0.2766300 -0.0604430 -0.0507760 -0.0507760 -0.1182200 -0.3047500 0.3729800 -0.0011087 -0.1748700 -0.1748700 0.0076392 -0.3264600 0.0622230 0.2021300 -0.1246000 -0.0096806 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 -0.309 0.156 -0.300 -0.300 0.000 0.000 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 -0.309 0.156 -0.300 -0.300 0.000 0.000 10.0221923 13.6037955 6.9860366 9.6659573 4.9242852 11.4048180 2.5906020 3.3010901 7.7384983 8.5341799 1.5905781 9.3072290 0.9385493 10.6159910 9.5595283 1.1311944 10.3222273 11.9090398 7.5213374 8.9883714 9.0066102 8.3743423 11.3427522 3.2186262 8.6576672 9.9620793 2.7750295 NA 10.0168644 3.0853567 12.9166205 13.5445646 8.8393899 10.5018555 9.0633829 9.0692774 4.6389600 2.3790941 -0.2838431 0.1311944 7.8692601 7.9043071 8.1241063 5.7677925 8.2171847 4.0619058 9.3289991 7.7786265 10.8983180 6.1700873 12.4509107 3.7161349 4.3790941 10.1912256 7.4024911 8.3623892 9.4592820 8.9907028 8.5792843 -0.2838431 13.2981157 0.7161569 10.3861966 NA 10.2252458 7.2809155 8.6048738 8.5595281 12.2824225 7.3719596 8.8044773 10.0007619 10.2967786 10.5296446 9.7987232 11.2326514 9.0373070 11.3635890 13.4140031 10.7659791 10.1938889 7.5616209 -0.8688056 7.4096175 11.2076497 11.149020 7.273275 8.977442 7.421187 8.401463 10.055494 7.234456 6.397955 9.932068 7.425789 4.670325 7.762345 7.839735 12.761549 10.703158 8.345487 7.439507 11.024849 8.695317 11.566422 9.377315 9.892304 10.020292 11.155269 10.492838 11.125168 9.971946 -1.868806 9.335274 9.184415 11.281391 9.268800 11.019103 11.186111 7.855682 13.909682 9.982136 11.527773 12.637848 9.730151 9.827266 4.731080 TCGA-A7-A26H 72 0 NA 724 breast stage iia t1 n1a m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.392901e-06 8.669932e-07 11.0113879 10.3949719 11.9799344 10.3265116 8.1540910 8.9190811 10.5249022 10.1925826 8.9859831 13.5905907 11.1464673 10.9085376 1.0626744 13.4718808 4.5862183 9.3288564 5.1287429 8.2400753 9.5509978 13.0075049 2.9206363 13.2612158 5.5464716 7.5401707 11.3373250 7.5444552 -0.9373256 8.9878910 10.3099898 3.1501210 7.3958109 8.4013920 NA 4.6625701 10.2347705 11.0964227 9.5979309 11.6864228 10.5837652 12.0511628 8.9837526 11.7460889 14.9158189 9.7628222 9.4213068 11.1051700 12.0164883 4.8175414 2.0626398 9.6201194 11.4462249 -0.9373256 11.5394018 5.2623279 7.1287450 6.0626549 10.9807734 12.3001643 10.1986854 12.6974100 13.5158298 7.6792042 11.0271770 10.7520574 11.7729239 11.4834054 5.5464716 13.4802774 11.3986042 0.3846025 10.2149404 9.6220328 3.5577164 6.0284410 9.8513740 10.7076385 9.9167447 10.8655758 3.4889263 9.4251475 13.2012474 11.4295242 9.9669139 9.2884656 -0.03395000 1.11040000 1.11040000 0.03326700 0.47667000 -0.01277200 0.02160300 0.00346870 -0.00650500 0.65627000 0.65627000 0.66235000 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.05751100 -0.51599000 0.77329000 1.59880000 0.01866300 0.01866300 0.01866300 0.00402430 -0.03395000 -0.03395000 0.00000000 -0.53226000 -0.01023200 -0.01277200 0.02160300 0.02160300 -0.00013862 -0.00650500 -0.00650500 0.48475000 -0.01202400 -0.24995000 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.05751100 -0.01615400 -0.51599000 0.77329000 0.00736090 0.01866300 0.01866300 0.00402430 0.14622000 0.02272500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 0.000 9.2313278 13.6434147 7.6588456 9.6555797 3.9933936 10.1685641 3.1070517 0.6476369 7.1737910 8.1448045 NA 8.9876017 2.3845748 10.6750634 9.4013920 3.0168528 8.6709104 8.7587539 11.1634822 10.0909070 9.5916127 8.5822918 10.0132116 2.5220809 7.8812376 9.2319543 3.1501210 -1.9373256 10.5469751 2.9206363 12.7004692 12.0557709 8.3492135 10.1669268 9.8399109 8.8635554 4.7208694 1.8700293 0.6476369 5.6476167 8.2275625 8.7674237 10.7907887 5.2721091 8.8942797 5.5383892 9.5459676 7.4910161 9.1874231 -1.9373256 11.3516658 3.9933936 4.8308384 8.8769979 5.5296898 4.7905740 9.8221277 8.3352854 5.7561426 -1.9373256 13.8182735 -0.9373256 10.3988831 NA 8.2830342 4.8440140 8.0499199 8.8505582 13.7337366 5.3572775 8.7751826 13.4718808 10.6262047 10.7121364 13.0075049 13.3054576 9.5644929 11.2065171 13.2665771 9.8562590 9.6201194 8.7101142 0.3846025 8.3070195 11.7492655 10.850558 7.915965 8.971799 8.642914 9.723988 9.985311 7.298670 8.259872 11.146467 6.720867 3.790574 5.062657 7.970042 12.639081 10.327098 7.509160 8.262328 12.822596 6.442034 13.421325 9.597931 10.217157 9.491539 11.956715 10.136128 10.836001 9.725324 6.945299 8.869882 6.117938 11.539402 8.795671 10.182676 10.980773 8.378982 13.658962 9.972174 10.354114 13.687337 10.304937 10.367007 1.870029 TCGA-A7-A26I 65 0 NA 661 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 1.387189e-07 10.0423368 9.9158422 11.9236706 10.2906626 8.1218521 8.6388591 9.9609873 10.4302501 9.2288187 13.1000189 10.3093396 10.5226724 2.4679315 12.3780505 4.7005951 9.3814203 7.0914481 8.4383261 7.5079484 5.0286487 -1.8541269 11.6019737 10.7034680 9.1000915 10.2746431 6.1628122 -0.2689906 10.3757244 11.0111576 5.1794274 8.6705461 8.0024297 10.3861994 4.2752902 10.4136689 10.6535513 9.9042276 10.4060418 10.0179095 12.0391162 NA 5.2440346 15.1274044 8.4942568 8.5628018 11.2409067 11.0927279 4.4127883 NA 9.7839876 10.3657779 -0.8538662 11.8600352 6.8705176 6.5297085 4.9008910 9.5559256 12.0949191 9.7867012 11.7528722 12.8886822 6.9757276 11.6691987 11.0406308 11.4563331 11.4254698 4.9788958 11.7377604 7.5638567 3.2752902 10.9442736 9.6841933 4.3372116 7.0972895 11.0377880 10.1621162 10.2626732 10.0374083 5.8464432 10.4391885 12.0435662 13.6576026 9.8726483 9.3945249 0.01377200 3.39120000 0.68742000 -0.37189000 0.02496900 -0.36204000 0.33027000 0.35790000 0.00027728 0.35186000 0.35186000 0.35871000 1.98620000 0.32898000 0.01768400 0.01936300 0.01936300 -0.35761000 -0.35761000 -0.37338000 -0.36352000 -0.37200000 -0.36604000 -0.35236000 0.00000000 -0.36011000 3.65690000 0.45820000 -0.39519000 0.02373400 0.01377200 -0.00981850 -0.37040000 0.41030000 -0.36204000 -0.37876000 -0.36386000 0.35790000 0.00027728 0.38072000 -0.40340000 0.69540000 0.35430000 0.39562000 0.39562000 2.43240000 -0.77337000 0.32898000 0.37199000 -0.77753000 0.01936300 -0.00092117 -0.80823000 -0.35761000 -0.38640000 -0.38640000 -0.37234000 -0.36352000 -0.38616000 -0.38403000 -0.36604000 -0.35236000 -0.01835300 -0.35544000 0.45820000 -0.39063000 0.38717000 -0.39018000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 0.000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 0.000 7.7808153 13.4709232 6.5383224 8.6597319 1.2586998 14.2475492 -0.8538662 5.9008910 9.1910814 10.4628515 3.1903936 9.1627151 7.1849229 11.0379778 8.3663825 0.7310094 4.7005951 9.6090178 7.9306392 8.2347925 9.5803877 8.5553952 11.9945295 2.5383147 7.2649455 9.6498301 5.4314057 -0.2689906 8.8086727 3.9533584 12.8268034 12.3905912 8.5057540 9.4157156 10.9442736 11.7935752 4.3358262 1.7309660 0.9533770 -0.2689906 6.9597852 7.2675377 7.3748230 1.6054469 8.3218032 6.4947324 9.7889586 5.8464432 9.8060003 5.0528940 9.3401456 3.8464432 4.6217354 10.4961756 6.2693493 4.6217354 8.3844091 7.9867824 5.1460035 8.0240553 13.0893433 0.4679055 10.4512111 -1.8541269 9.9269542 3.7005951 9.0309380 8.9765194 10.440625 9.867958 8.113231 12.378050 9.550081 11.083562 5.028649 8.941232 8.445212 10.536173 14.587862 10.487801 9.783988 7.740329 NA 8.027118 10.136817 10.462852 4.335826 8.962988 8.584796 9.123957 9.171116 6.179427 4.028649 10.309340 10.264297 2.669571 6.657757 8.339764 12.436887 9.771257 6.814889 7.605436 10.360323 5.449786 11.660165 9.904228 9.726263 9.223488 12.288351 9.914189 9.763472 9.993453 NA 9.378162 5.775361 11.860035 8.314677 9.475733 9.555926 8.079695 13.648308 10.661950 10.633091 12.153470 11.111248 8.838620 7.499151 TCGA-A7-A26J 49 0 NA 627 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 3 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 11.3128517 10.9390413 12.2804864 10.5125827 8.9057736 9.1165077 9.8823005 9.8319512 8.6046492 13.1702711 11.8761562 10.6578988 2.0779607 13.0793157 4.1710627 9.3334553 4.3208096 8.6778673 9.5703417 12.9906442 4.4929940 13.4342597 5.1822911 9.9326317 10.7194041 9.3112545 0.1710787 8.2003508 10.1791423 0.9784153 7.4839471 7.9832410 NA 4.3998820 10.3356565 11.4302186 10.6077754 11.4874868 9.8925903 12.0119401 0.1710787 10.4349199 14.2319708 9.6754658 8.8766962 13.0126773 12.3751764 4.4189927 3.3003434 9.8140181 11.9643623 -1.8287932 11.1715921 5.7179588 6.7746896 4.9259520 10.7607150 12.0601875 10.7316355 12.3476266 13.1979330 8.1512033 11.1826405 11.2185951 11.4900302 11.7907107 5.6629176 12.0223249 9.7063392 NA 9.8198708 9.7092527 4.2728817 6.2478801 11.1939518 10.3905349 10.3722688 10.8223398 2.8715086 7.6709097 12.6515385 11.7017140 10.0594265 8.9679147 -0.0193140 1.0686000 1.0686000 0.0237060 0.0237060 0.0000000 0.5615200 0.5711300 -0.6432500 -0.6463100 0.5552600 0.5613400 -0.0121620 -0.0121620 0.5546000 3.3815000 -0.6315000 0.5424200 0.5343200 -0.0342230 -0.0085766 -0.0128510 0.5503600 0.5503600 0.5503600 -0.0514510 -0.0514510 -0.0514510 0.5634700 -0.0289010 -0.0193140 -0.0258930 0.0237060 0.0000000 0.0000000 0.5615200 0.5615200 0.5711300 -0.6337700 -0.6432500 0.0100060 0.0100060 -0.6463100 -0.0183530 -0.0183530 -0.0183530 -0.0183530 -0.0121620 -0.0121620 0.5546000 -0.6542600 -0.6434900 -0.6419800 0.5424200 0.5343200 0.5343200 -0.0342230 -0.0085766 -0.0083005 -0.6468700 0.5503600 0.5503600 0.0112610 -0.0514510 -0.0514510 0.5634700 -0.0142280 -0.6181500 0.000 0.000 0.555 0.000 0.534 0.534 0.000 0.000 0.000 -0.028 -0.607 0.550 0.550 0.000 0.000 0.000 0.000 0.000 1.069 0.563 0.563 0.000 -0.618 0.000 0.000 0.000 0.000 0.000 0.000 0.562 0.562 0.559 -0.075 0.000 0.000 -0.091 0.555 0.000 0.000 0.000 0.000 0.000 0.000 0.555 0.000 0.534 0.534 0.000 0.000 0.000 -0.028 -0.607 0.550 0.550 0.000 0.000 0.000 0.000 0.000 1.069 0.563 0.563 0.000 -0.618 0.000 0.000 0.000 0.000 0.000 0.000 0.562 0.562 0.559 -0.075 0.000 0.000 -0.091 0.555 0.000 0.000 0.000 0.000 8.5042191 12.8569076 8.3926510 9.7107073 4.1934327 10.5469178 0.1710787 0.1710787 8.3409890 7.7522642 0.4930324 9.0133514 3.7857702 10.1597485 9.2092969 1.9784153 8.4355065 9.9638541 6.6098554 9.8448145 9.7009872 8.4118550 10.1501317 3.1710627 7.8310595 9.1084377 2.8715086 NA 10.4240248 1.6304987 11.5910240 11.9231308 7.8363995 10.3789933 11.3131709 8.8549357 5.4378503 0.7559985 0.7559985 8.0719305 8.3384819 7.2532131 9.9040791 4.7560252 6.9378246 5.7857728 10.7378314 7.4046835 10.0609480 -1.8287932 11.1258054 4.6140089 3.7560305 9.6239691 5.8163616 3.2585340 9.6356097 7.7275699 4.8292762 -1.8287932 13.5872016 -0.8290494 9.8505440 -1.8287932 7.8113085 4.1018013 7.7409195 8.5275157 14.231572 6.131067 8.424911 13.079316 10.397410 10.962227 12.990644 12.693339 8.540399 11.871898 13.538513 10.948525 9.814018 9.231760 1.871489 7.634588 12.286920 11.114678 8.249214 8.905774 9.859314 9.773299 10.750762 6.550442 8.070421 11.876156 5.836399 4.800418 6.678858 7.734603 11.174757 9.861935 9.360271 8.741868 13.973100 5.290004 11.661191 10.607775 10.737594 9.004745 11.088809 9.531911 10.849664 9.128166 -1.828793 8.546429 4.563384 11.171592 7.463385 10.018513 10.760715 8.094391 13.492957 10.261838 9.730441 13.226389 9.988047 9.920095 1.492981 TCGA-A7-A2KD 53 0 NA 679 breast stage iiia t2 n2a mx female 2011 NA yes infiltrating ductal carcinoma 8 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 2.774378e-07 11.47143522 9.88103838 11.26491134 9.56958698 10.90673820 10.28325820 9.54350884 10.07628424 10.13259342 13.23075068 10.23646739 10.46504770 2.26429621 16.87040449 3.18181815 9.77998506 7.42751567 8.97929400 10.32917776 12.78495852 0.09437121 13.14003463 6.00125054 8.59945728 11.08481882 3.18181815 -0.32066629 10.17284475 10.67226108 NA 8.11949988 7.68868463 0.09437121 4.64894856 9.74675716 11.67084463 9.05073649 11.00350330 10.46177502 11.74249311 4.04855880 11.32453088 14.79827737 7.90560663 9.77207996 10.85029101 11.99031418 4.92725174 -1.90562879 8.67650226 10.69148173 0.67933371 10.93139682 6.40270001 6.88226276 5.10558590 10.42247417 12.28580512 10.17850427 11.84160920 12.78140785 7.08020249 10.51300350 10.24017466 11.53963381 10.57590744 5.52062654 11.91144386 11.57779819 4.09436276 9.83245255 9.27177978 2.73820578 6.11116906 8.64414506 9.98348389 11.57439310 9.92408296 1.90172613 9.15032053 12.73821646 12.03118223 9.99598149 9.42975069 -0.301930 0.077430 0.077430 -0.317160 -0.315170 0.033408 0.678340 -0.319490 0.022725 -0.708180 -0.656220 1.049900 -0.696400 0.068665 -0.024251 -0.041838 -0.041838 1.324400 0.128550 -0.344000 -0.313070 -0.321930 -0.540880 3.656900 0.243260 1.197000 -0.267390 -0.265280 1.439000 -0.686240 -0.297090 -0.329710 -0.320370 -0.301110 0.034076 -0.339290 -0.351840 -0.319490 0.022725 0.348760 -0.334100 0.110120 -0.755900 -0.661950 -0.648280 0.343560 0.343560 -0.313770 -0.364650 -0.024251 -0.041838 -0.410910 -0.410910 -0.684780 0.128550 0.128550 -0.327090 -0.313070 -0.340570 0.676410 -0.703700 1.064400 0.352670 -0.656680 -0.527570 0.015444 0.023987 0.310010 -0.300 -0.300 0.000 0.000 0.129 0.129 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 -0.004 -0.680 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.317 -0.648 -0.305 -0.446 0.193 -0.300 -0.300 0.000 0.000 0.129 0.129 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 -0.004 -0.680 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.317 -0.648 -0.305 -0.446 0.193 8.9922056 13.2418435 8.8051667 9.3505691 3.2642812 10.7823920 2.0012618 -1.9056288 8.6354569 8.1778396 -1.9056288 7.3910468 3.6179214 10.4837228 10.2303901 5.9081404 8.6383588 9.2498110 10.3904161 10.5947043 9.4474850 8.6422189 10.6206150 3.3038100 8.2479123 10.0936556 2.4162993 NA 10.5227205 3.3038100 12.1959257 11.6532593 8.0072499 9.5496875 10.1428471 9.4634124 6.8154589 1.4162993 -0.9056288 8.7436166 9.3699029 9.5756551 9.7861038 3.4162858 6.2433968 6.8459040 9.9815808 8.5164249 10.6616034 NA 9.4009917 3.0485501 3.9272517 10.5234872 6.9711837 4.8757211 9.2523388 7.8324527 7.0858824 -0.9056288 13.4182595 1.9017261 9.9359247 NA 8.5650190 4.6489486 8.8567424 7.7327963 13.354111 6.088714 8.733701 16.870404 9.769435 9.763245 12.784959 12.889284 9.077924 11.739118 12.886083 10.331271 8.676502 7.817168 3.952343 8.039804 11.808284 11.4689923 8.0929505 8.5352295 8.9647250 10.7917623 10.9206187 7.5781764 9.4666812 10.2364674 6.8984913 0.6793337 10.5984344 9.7768370 11.2066369 9.8695590 7.8575724 9.3546917 11.8462181 6.1277839 11.3464521 9.0507365 10.2564368 10.2576954 11.5909644 10.2268600 10.9341546 8.9967353 1.4162993 9.5814718 6.4430878 10.9313968 7.7632456 10.5214112 10.4224742 7.3255816 13.4174854 9.4963063 10.0855278 13.8280377 11.1569124 9.7422683 2.4866886 TCGA-A7-A3IY 71 0 NA 345 breast stage i t1c n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 1 1 2 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 10.6005055 9.0090369 10.8232225 7.2104580 8.7161575 8.9793918 9.7245210 10.1650935 10.2806046 12.9807638 11.0163542 10.3769766 1.2898935 11.0656206 2.2898935 11.2979212 7.3248880 8.3027166 10.6615138 12.9994074 1.0675010 13.5920421 7.1155327 9.8027968 9.9409444 9.3003210 3.9088033 12.7016368 10.2061988 2.6524635 8.1064195 9.0552380 -0.5174615 3.4367349 9.2357546 10.3444002 9.8929891 9.8667819 9.4147527 10.3905551 13.6076688 11.4949878 14.5792118 6.1664443 10.7499098 10.8858162 10.4722871 3.6524635 4.9419702 8.2256895 10.9381219 0.4825385 11.1980709 5.8748560 6.3590555 4.1263947 10.7708271 11.6689616 10.7032185 11.6970088 12.3966426 8.3894283 10.7574984 10.6143948 10.7931506 10.1920525 3.9419702 11.3739418 10.8828837 -1.5174615 10.2931095 8.7292785 2.4217754 6.4073511 10.7705387 10.4334582 10.0265363 9.2556770 5.2104590 7.3682340 12.5991255 12.1764603 9.3636519 9.4381878 0.0011093 0.0011093 0.0011093 -0.0486130 -0.0486130 0.0144700 0.0020805 -0.0044312 -0.1659200 0.0065960 0.0065960 0.0065960 -0.0008316 -0.0008316 -0.0030475 -0.0030475 -0.0030475 0.0033299 0.0033299 0.0036076 0.0011093 0.2848500 -0.0083005 -0.0083005 -0.0083005 -0.0107840 -0.0107840 -0.0107840 -0.0121620 -0.0064957 0.0011093 0.0058309 -0.0486130 0.0144700 0.0144700 0.0020805 0.0020805 -0.0044312 -0.1659200 -0.1659200 0.0000000 -0.0140900 0.0065960 -0.0030475 -0.0030475 -0.0030475 -0.0030475 -0.0008316 -0.0008316 -0.0030475 -0.0030475 -0.0030475 -0.0030475 0.0033299 0.0033299 -0.0080970 0.0036076 0.0011093 0.2848500 -0.0081624 -0.0083005 -0.0083005 0.0033753 -0.0107840 -0.0107840 -0.0121620 -0.0049844 -0.0400730 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.45408128 13.03784595 7.60924228 9.37432160 2.16848158 10.28019938 1.06750105 3.06750105 8.79768746 8.58451347 0.06750105 7.26717246 2.80446664 10.48921456 9.28666888 2.38942914 5.95827198 9.29631905 9.82849751 9.30032098 10.17835773 7.00217368 12.19689070 4.52693267 9.28666888 9.85158977 2.87485597 NA 10.28908748 3.48253855 13.61491707 12.94593449 8.01586772 10.05476438 9.68343645 9.48675821 3.12639474 3.61182156 -0.51746145 5.34051954 8.73402028 11.07779530 8.16903857 3.84009055 8.34692499 7.27370050 10.52624873 5.51596155 9.39093052 0.06750105 11.40233228 3.90880330 7.85322533 9.81932331 7.03589879 0.06750105 10.21767071 8.67236240 5.63228567 0.80446664 14.10564772 1.48253855 10.89933540 NA 9.47051246 5.11189517 8.05049408 9.36975851 13.1751032 5.7586630 8.8834174 11.0656206 10.5300026 10.5087155 12.9994074 12.0788441 8.8944513 10.1096157 13.0632086 10.6076283 8.2256895 10.0366470 0.8044666 7.3682340 10.7484459 10.616322 5.591063 9.497953 8.160258 8.279502 9.389857 7.758662 8.593673 11.016354 6.799950 1.067501 10.289893 7.177070 12.352035 10.068439 8.532386 9.627833 8.973389 4.632286 11.707049 9.892989 10.770250 9.503518 10.539514 9.451205 9.892989 8.230731 NA 9.659166 2.804467 11.198071 7.404379 10.659646 10.770827 6.696856 14.648936 10.565020 10.438914 12.681673 10.356751 8.897223 NA TCGA-A7-A3IZ 62 0 NA 322 breast stage iia t2 n0 (i+) m0 female 2011 NA yes infiltrating lobular carcinoma NA white not hispanic or latino NA NA 1 3 NA NA 1 1 3 3 5 2 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.872705e-06 6.935946e-07 11.00574804 10.21902110 12.38109639 9.08159954 8.56741235 8.52827711 11.52364154 9.35047935 10.19047647 8.88289122 12.52040430 10.55448496 3.29482657 13.31527602 4.41412200 7.05522711 5.50293202 8.57639327 10.60049157 13.83334631 4.34373470 15.53876626 0.43680147 9.82835930 10.99812984 7.08069816 -1.56319853 8.07346626 9.77446373 1.43685476 7.21162941 6.79439377 4.74062000 3.96040050 10.32634578 9.76045966 11.01356240 11.35607766 10.37531882 11.13467826 13.13868978 11.82741392 14.15307187 9.12072258 10.51298938 12.24339150 11.95917819 4.36758074 NA 9.15280376 9.70421388 0.02176397 10.52098584 7.21820188 5.00669747 4.64629517 10.21532975 12.34072370 9.70479901 11.29423975 12.97696990 7.23774152 10.72973858 10.83887064 11.00313382 11.91939778 5.98373697 11.78280148 12.15291107 -0.56319853 10.09505332 9.01804241 3.14226638 5.15108759 10.01615781 9.89062696 10.47678903 10.00003818 2.60677384 4.29481922 12.30720659 10.45469421 10.17408915 9.66986228 -0.0167530 0.6345200 0.7397900 0.0052258 0.0000000 0.0182650 0.0142810 0.0064771 0.0170750 3.6569000 -0.0207350 0.0113510 -0.0011444 0.0028643 0.0099570 2.4647000 3.6569000 -0.0179890 -0.0071751 -0.3129900 -0.0029580 -0.0101430 -0.0531190 -0.0531190 -0.0531190 -0.0828480 -0.0828480 -0.0828480 -0.0146890 -0.0509140 -0.0167530 0.0443820 0.0052258 0.0182650 0.0205730 0.0142810 0.0142810 0.0064771 0.0145600 -0.8690100 0.0074509 -0.8534000 -0.8432600 0.0074509 0.0074509 0.0074509 -0.0168900 0.0028643 0.0028643 0.0099570 -0.8572900 -0.8324700 -0.8324700 -0.0071751 -0.0071751 -0.0071751 -0.3153400 -0.0029580 -0.0203120 -0.8696500 -0.0531190 -0.0531190 0.0208530 -0.1194400 -0.0828480 -0.0146890 -0.0010191 -0.0483900 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 -0.107 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 -0.107 7.8140524 11.7154365 3.9286925 9.1021778 3.1917363 11.0764087 0.7587296 NA 7.5916600 8.9730892 NA 6.2306718 -1.5631985 9.3194849 9.5872238 3.7943951 6.4866902 9.7446119 12.8986410 10.3380859 9.6197451 8.5453665 10.9747883 3.4368414 9.4839659 10.2132749 0.7587296 NA 10.4508623 3.3910390 11.8125601 11.6846211 7.2570210 10.7494412 7.5763929 9.1908943 5.6462952 2.7587722 0.4368015 1.2442173 8.8931962 9.1215905 10.3716385 2.6847739 7.3705322 6.7987854 10.4491172 6.5243051 9.8113381 NA 10.5869065 6.3072063 7.3997376 8.5558606 6.3526614 NA 9.1707045 7.6680631 7.3377084 NA 13.6698248 0.4368015 10.1553747 NA 7.7106377 5.4702635 7.9044474 8.7463181 17.295221 5.051550 8.176622 13.315276 9.714710 10.492124 13.833346 13.096671 12.320705 10.879526 12.417963 11.836921 9.152804 8.938679 1.606774 7.648730 11.605044 11.137932 8.363138 8.474389 10.132505 9.107498 10.949217 5.854694 5.524305 12.520404 6.924682 3.566121 8.850470 7.476666 9.646904 9.963341 9.816762 8.976001 13.007943 1.896272 10.791331 11.013562 9.955495 9.258616 11.602220 10.448768 10.733758 8.592925 NA 9.028299 2.244187 10.520986 4.829159 11.214508 10.215330 7.663254 13.994665 9.848353 9.439657 12.405689 10.542750 10.531909 1.021835 TCGA-A7-A3J0 62 0 NA 313 breast stage iia t2 n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 1 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 4.855162e-07 10.387789 9.930719 11.562372 9.928809 8.743516 8.551368 11.615455 10.021680 9.929574 13.792853 10.797883 10.557807 3.331949 11.257828 3.216470 10.070996 7.847448 8.019528 9.399695 13.736956 3.175828 13.611770 7.165490 10.437429 10.551616 8.140626 1.046561 10.670430 9.556818 2.505993 8.486379 9.320927 NA 4.134007 9.366221 9.744385 10.398316 9.225213 9.730859 11.232508 13.446227 11.939850 14.442049 9.089035 11.205933 12.168244 11.427010 3.368475 1.046561 8.848257 9.343465 -1.953439 10.890862 3.438865 5.585708 5.123364 10.876073 11.680111 10.057776 11.970062 12.518097 6.715434 10.449827 10.301480 10.851285 11.058125 4.840967 11.183700 11.194707 NA 10.182258 8.994916 2.368489 4.690406 10.943070 10.601617 10.899663 9.988696 1.216486 7.399695 10.613078 10.410957 9.780411 8.955691 -0.01078400 0.29803000 0.29803000 0.00000000 0.00000000 0.00097064 -0.01367700 -0.01037000 -0.01037000 0.78510000 0.78510000 0.79084000 -0.01711600 -0.01711600 0.76312000 0.76312000 0.76312000 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.02753500 0.70455000 0.70455000 0.71039000 0.62497000 0.69148000 0.65433000 -0.05185600 -0.05576900 -0.01078400 0.00097064 0.00000000 0.00097064 0.00097064 -0.01367700 -0.01367700 -0.01037000 -0.01037000 -0.00193990 -0.01078400 -0.01585100 0.78510000 0.63372000 0.63372000 0.63372000 0.63372000 -0.01711600 -0.01711600 0.76312000 0.76312000 0.76188000 0.76188000 -0.01601700 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.02753500 -0.03653800 0.70455000 0.70455000 -0.00940460 0.62497000 0.69148000 -0.05185600 -0.02603000 -0.05415100 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 0.153 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 0.153 7.76079378 10.74068872 5.60113787 9.14523852 5.28495454 10.87646937 3.29447372 -0.95343909 8.63526321 6.66493361 1.04656091 6.17747934 3.53840159 10.23328173 9.36960323 2.04656091 6.83118308 9.57792991 11.63432603 10.21866349 9.74166804 8.07030291 10.81493961 2.29448842 9.96130730 10.32499799 2.90452263 NA 10.83036523 3.33194880 12.72740247 12.19946709 6.55830131 10.68882587 7.21897583 9.56618479 6.39527706 4.38639711 0.04656091 4.02383196 9.78969991 11.07997151 8.74264662 2.57009857 10.13679327 7.49156373 10.75455459 5.29447739 9.42375904 NA 13.84164960 3.90453227 9.86991581 9.21993832 6.90564814 4.63151177 8.33310614 7.72602874 8.92459935 -0.36847659 13.05410144 0.36848900 10.89693070 -0.95343909 9.90102737 4.00074820 7.45169001 9.72206448 13.204578 5.675906 8.788858 11.257828 10.809346 9.881809 13.736956 13.350044 9.442875 10.628690 12.709328 11.430928 8.848257 7.629631 2.046561 7.818038 11.029898 11.160128 7.944394 8.843399 8.723387 9.099796 10.957557 6.722506 9.256002 10.797883 6.554343 NA 8.315675 8.307668 12.053751 10.251425 8.522282 10.177119 9.884571 5.601138 10.507427 10.398316 9.901027 10.542903 11.217725 9.854708 11.032390 10.296847 NA 10.012466 5.668601 10.890862 9.837304 12.139884 10.876073 7.338916 13.718753 10.033813 10.350900 13.783400 10.612840 9.770636 2.904523 TCGA-A7-A3J1 63 0 NA 343 breast stage ia t1c n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10.4606846 9.9361763 12.2233110 9.8475671 8.3034497 9.4508259 10.9825946 9.4862150 10.7109163 8.7912437 9.4007727 10.4786295 3.0975434 13.5553615 3.3750811 9.5222843 6.4582934 8.2998916 10.7055482 12.8344597 0.8605259 14.4152321 7.5268568 10.1487098 10.5151422 5.8986413 NA 13.4824674 8.4074008 2.8605060 8.7878608 7.2747388 0.6381202 5.1084325 10.1226010 10.4054706 10.0185748 11.4472119 9.7457667 11.8790044 0.6381202 10.4494884 14.6872674 8.0492436 10.1865857 12.1099583 11.2051191 5.6305802 7.3592128 9.3437462 11.2279209 -1.9467496 10.6847831 5.5529979 7.2155427 4.8213378 10.4230212 11.4748216 10.3770504 11.4423793 12.5853245 8.9258262 10.6498069 10.5013759 11.0886377 11.6813689 5.6970065 11.2505216 10.8785076 -0.9467496 10.5046200 9.0261311 3.7558063 6.7912437 10.8495965 9.8291730 10.6997099 10.0218181 2.4454619 9.6362340 13.5022999 12.6227696 10.3809846 10.0051644 -0.5355100 0.5290600 0.5345000 0.0000000 0.0000000 0.0088920 0.0420240 0.0068044 -0.5484400 -0.5372300 0.0079175 0.0079175 0.0127950 0.0127950 0.0026357 0.0026357 0.0026357 0.0019418 0.0019418 0.0059123 -0.5340900 -0.3977500 -0.0105080 -0.0105080 -0.0105080 -0.0309290 -0.0087146 -0.0202750 0.0120970 -0.0023553 -0.5355100 -0.1914900 0.0000000 0.0088920 0.0026357 0.0420240 0.0420240 0.0068044 -0.5484400 -0.5484400 -0.0037395 -0.0343590 -0.5372300 0.0111210 0.0111210 0.0111210 0.0111210 0.0127950 0.0127950 0.0026357 0.0026357 -0.5374400 -0.5374400 0.0019418 0.0019418 0.0019418 0.0125160 -0.5340900 -0.3977500 -0.5490500 -0.0105080 -0.0105080 -0.1950000 -0.0309290 -0.5647500 0.0120970 0.0070826 -0.2132100 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.480 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.480 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 -0.121 10.11012765 12.60245463 5.42818930 10.45962198 5.68694587 11.09069818 6.03043099 -0.94674962 8.64467361 8.77766497 -1.94674962 7.97649367 5.19270312 9.72425002 9.82793840 3.09754338 9.57229606 9.46836480 9.27231975 10.56737213 10.03642283 7.84105354 10.99162820 5.55299794 10.33942025 10.35207301 3.09754338 NA 11.08002049 3.54500460 11.88247760 11.98591965 8.19908337 9.51463063 10.90118730 9.21491308 5.95401713 -0.94674962 0.05311134 5.47941490 9.22870087 9.79082106 9.98129941 6.32927611 8.97856490 7.56687907 10.54249748 7.23057098 9.57671316 NA 12.56731052 4.00734802 5.23305974 9.40328370 6.15921744 6.52888539 9.97981786 8.83778623 6.92043027 0.37506724 13.19529821 2.22308269 10.40932814 0.05311134 7.35921279 6.36149116 7.11654670 9.05033082 11.776916 5.223075 8.465721 13.555362 10.494280 10.505135 12.834460 11.859802 9.319229 11.056494 12.923082 10.382387 9.343746 8.757055 2.445462 7.370564 11.289913 11.62324411 7.36603452 8.28437254 8.99786340 8.58842682 10.85436849 8.91501350 8.69339635 9.40077272 6.63058021 3.69700646 7.70060964 7.22827614 9.91617595 10.65376111 8.60068195 8.85405114 12.68943600 7.59230977 11.73353827 10.01857479 10.36348004 10.34662287 10.96248186 10.50100934 11.15430624 8.31053917 0.05311134 9.65548368 7.98978900 10.68478307 6.46254153 11.28721722 10.42302123 7.84113533 12.79950550 10.12494881 9.86050614 12.82752652 10.96697568 10.17306508 2.37506724 TCGA-A7-A3RF 79 0 NA 408 breast stage iia t2 n0 m0 female 2012 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 1 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 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10.293712 9.852636 10.297226 9.284298 0.00055459 0.00055459 -0.01917700 0.00291330 0.00147530 -0.01133500 0.00666530 0.00083195 0.00083195 -0.00078398 -0.00078398 -0.00027724 -0.00110870 -0.80923000 0.00332990 0.00332990 0.00332990 0.00041593 0.00041593 -0.00346270 -0.00774820 0.00000000 0.00332990 0.00332990 0.00332990 0.00388540 0.00388540 0.00388540 -0.00069303 0.00055459 0.00055459 -0.00124730 0.00291330 -0.01133500 -0.01133500 0.00666530 0.00666530 0.00083195 0.00083195 0.00083195 -0.00567570 -0.00567570 -0.01952500 -0.00747200 -0.00747200 -0.00747200 -0.00747200 0.00097064 0.00805670 -0.00137270 0.00332990 0.00332990 0.00332990 0.00041593 0.00041593 0.00041593 -0.00346270 -0.00774820 -0.00949930 0.00138680 -0.00041585 0.00332990 0.00777830 0.00388540 0.00388540 -0.00083160 -0.00802400 0.00805670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.70640070 11.72768434 2.90373245 8.83555022 2.76479199 11.32866786 0.44434902 NA 8.51978562 8.63536588 NA 6.16540550 -1.55554495 10.27164919 9.09266413 2.25165851 5.32695074 8.18408735 12.82002477 11.45063263 9.59083066 6.81499383 12.16700736 1.44429601 10.17689793 10.16668720 1.90373245 NA 11.26268901 2.14473165 12.84184747 12.84478576 6.26448576 10.42408901 7.61923252 9.61485760 5.39850429 8.60669798 -0.55575701 1.76621350 9.74523094 11.17795746 9.31235727 -1.55554495 10.81698386 9.61985608 10.17052475 4.69223189 9.34894122 NA 13.19339031 2.02927618 9.47221257 9.37164750 7.93102112 0.02927618 8.57230080 7.86004841 11.90271314 1.61423868 13.91229410 1.02927618 11.54677439 NA 8.16711402 4.67312672 7.16540550 10.12158571 12.737093 3.614227 8.907831 9.505678 10.307718 10.717519 13.644362 12.492112 8.872667 9.808441 11.743944 12.050827 7.806251 10.594371 -1.555545 6.766235 10.467714 10.8571409 9.2708550 8.4086473 9.2427783 7.4968745 10.1436620 4.5940528 5.4215869 8.0479331 8.8632134 NA 6.8579350 6.5575280 9.8758042 9.5009442 8.5291150 10.0400302 6.3022880 1.7662135 10.7470482 9.8473186 11.0944607 10.6254588 11.3908474 9.8867317 10.4393669 8.8160832 0.7662135 9.7099216 2.9037324 10.5006055 5.3868213 11.5280916 9.8489160 6.3269489 14.0912303 10.8141764 10.2464189 12.1612332 9.8679477 9.1034106 NA TCGA-A7-A425 70 0 NA 447 breast stage iiic t3 n3a mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 3 3 NA NA 3 4 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.040392e-07 9.0604457 8.8755365 11.4845443 8.1024875 8.4985668 8.6748391 10.9608582 9.3557581 11.0360010 10.6786339 11.3462457 10.4751196 1.1062813 12.6795022 2.5212769 10.6899591 6.4221539 8.1081266 9.9480759 12.6390112 0.5212518 13.6109030 6.4638023 10.2192145 10.4123112 5.2077875 1.5213021 12.9597540 10.1950377 3.5212895 7.7950825 5.6912131 1.1062813 3.1651402 9.5927493 10.3529901 9.4431280 10.7132715 9.2398200 10.6454083 5.4161033 11.4669137 14.6569362 9.2136496 10.1071837 10.7576002 9.5974345 4.6912103 3.0448487 7.3667768 11.5372247 NA 10.0151424 6.9559149 5.0911413 5.1506450 9.2415313 11.6893323 11.0568054 11.3034662 12.0617783 8.0777931 10.0295770 9.9285548 10.4304301 10.8213535 3.1062478 10.3136707 9.3494234 NA 10.4191324 7.8544421 4.1971026 5.4638023 10.5081956 9.2269193 10.4568204 7.7036814 2.8432201 9.5940896 12.3574360 12.1725630 9.8147587 10.2715753 -0.0115880 1.4339000 1.4428000 0.4737500 -0.0302670 -0.0274540 0.9565200 0.4817200 0.4650200 -0.0305400 -0.0305400 -0.0305400 -0.0165670 -0.0165670 0.4179800 1.5045000 -0.0612860 0.4703200 0.4703200 -0.0226060 -0.0105080 -0.0066432 -0.0020784 -0.0020784 -0.0020784 0.0132130 0.0132130 0.0132130 0.4945900 -0.0115880 -0.0115880 0.0000000 0.4737500 -0.0109220 -0.0274540 0.9565200 0.9565200 0.4817200 0.4650200 0.4650200 0.4643400 0.4643400 -0.0305400 0.4785600 0.4785600 0.4785600 0.4785600 -0.0165670 -0.0165670 0.4179800 0.8479000 -0.0816070 -0.0853240 0.4703200 0.4703200 0.4844000 -0.0226060 -0.0105080 -0.0181430 -0.0140900 -0.0020784 -0.0020784 -0.0128510 0.0132130 0.0132130 0.4945900 -0.0151890 -0.0388840 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.000 0.401 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.000 0.401 8.8832307 12.9874910 4.9642323 10.7974114 3.6289719 12.1332339 2.2217224 3.0448487 9.6962126 9.2803430 -0.4787482 7.6290272 5.3157039 9.2894714 9.8854217 2.7692216 8.7997365 8.7763156 11.1237539 11.0066132 9.7449208 6.9683707 11.8429333 3.5656825 9.0030864 9.8130332 5.4401516 1.5213021 10.8227832 2.6087383 12.7797794 12.1661572 7.2795103 9.7833818 8.1415069 9.7398503 2.1062478 -1.4787482 NA 3.6505693 9.5450413 11.0035908 9.5035676 6.7974112 8.7791934 8.5170540 10.0633515 5.4520254 9.3502168 -1.4787482 12.0555899 3.5656825 4.4985700 9.1370270 5.4822158 3.3792744 10.1700939 8.5914079 7.3124501 2.9807200 13.7202308 0.1062143 11.1020166 NA 6.2007672 5.4401516 7.3414663 8.1777120 12.751177 5.852204 8.058505 12.679502 9.955394 10.896598 12.639011 11.779117 8.965422 9.875536 13.339520 10.782500 7.366777 8.547810 4.165140 7.083529 10.579955 11.3951156 7.7135797 8.2644384 8.8533236 8.1705430 11.2245028 7.4161050 9.7061624 11.3462457 7.1249133 1.5213021 8.1972442 8.3142887 10.1020166 10.6268682 7.7404554 10.1786055 9.6930893 4.9306758 12.9362490 9.4431280 10.4352983 10.6576373 11.4774816 10.6937145 10.8821341 7.7476989 0.8431799 9.9494064 5.3541771 10.0151424 5.1937126 11.2763039 9.2415313 6.5212863 13.3348678 10.1006029 9.9533069 12.4384726 11.0497411 9.9944854 1.9807200 TCGA-A7-A426 50 0 NA 364 breast stage iiic t3 n3a mx female 2012 NA yes infiltrating lobular carcinoma 13 white not hispanic or latino NA NA 2 3 NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 9.6736525 8.6414535 11.4923698 7.7825960 8.7550802 8.8158245 10.8798584 9.4344247 10.9783321 11.1828515 10.4078722 10.4049243 1.7345687 12.4334124 2.1495846 10.8131587 7.4894506 8.7457903 10.3298206 12.3242143 1.4715517 13.8071982 7.0921154 10.0654650 10.5909886 7.1297405 0.9569488 11.8851566 8.6751215 1.4715517 8.2489484 6.8707001 -0.8504805 4.7194573 9.7298591 9.3031526 10.1618760 11.2329137 9.0466897 10.5826644 12.5306703 11.2469744 14.5816205 8.3883514 10.5579303 10.4442214 9.8028935 5.5504790 5.7420574 7.9044883 11.9616776 -1.8504805 10.6245740 5.6172074 5.7194573 3.7345579 9.5142825 11.9166470 10.7142265 12.5351260 12.6427055 8.4361585 10.5010920 10.6885170 10.9621790 11.0126253 4.9697814 11.3686178 10.4289210 0.4715517 10.5104477 8.9919509 5.0340748 4.6414535 10.8374136 10.0572424 10.6230527 9.1524157 4.0322419 10.1754323 13.6136677 13.0902812 10.0095235 10.4977755 0.00680440 0.40928000 0.42688000 0.00000000 0.00000000 0.00152550 -0.00512270 0.00416320 -0.42767000 0.45309000 0.45309000 0.45309000 0.00583090 0.00583090 0.00610900 0.00610900 0.00610900 -0.00857660 -0.00857660 -0.02903800 0.00013863 0.00541390 -0.07947600 -0.38739000 0.08796900 0.01209700 0.01209700 0.01209700 0.00027728 0.00680440 0.00680440 -0.00360110 0.00000000 0.00152550 -0.00097033 -0.00512270 -0.00138580 0.00416320 -0.42767000 -0.42767000 -0.00180140 -0.00180140 -0.42702000 0.00249690 0.00249690 0.00249690 0.00249690 0.00583090 0.00583090 0.00610900 0.00610900 -0.00110230 -0.00110230 -0.00857660 0.40144000 -0.01700800 -0.02903800 0.00013863 -0.00465050 -0.43680000 -0.07947600 -0.38739000 0.00055459 0.01209700 0.01209700 0.00027728 0.00346870 -0.41652000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.010 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.010 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 0.000 9.1726618 13.3909507 5.5842289 10.5721911 3.7203660 10.9779355 4.4350018 1.6090457 9.1608279 9.5483443 0.1496496 8.1411226 5.3687683 9.5831860 10.2260822 3.7643143 9.3201516 9.3350955 9.7794126 11.0596812 9.8014685 7.5289791 11.4281953 2.8500393 10.1407680 10.3129358 5.8149374 0.1496496 10.6524324 5.3492733 13.0950444 12.0108814 8.1254486 9.7916523 9.0199654 9.4447956 4.4894530 -0.8504805 NA 4.8638443 9.5413813 10.4751871 9.6202594 7.4046290 8.8257427 8.3170186 10.2779172 5.3094709 9.8162685 0.9569488 11.9792242 3.9044841 5.4442198 9.3269081 6.4622110 5.6414535 10.4827559 8.9119827 8.2775947 0.1496496 13.7669820 1.9569488 10.6434561 NA 8.0122379 7.0654797 7.2633424 8.8317173 12.4835966 4.8500393 8.4704010 12.4334124 10.5624351 10.4468034 12.3242143 12.0003735 9.1309466 10.2456568 12.8064165 11.3052094 7.9044883 8.4670133 0.1496496 7.7495135 10.6697281 11.236898 5.425724 8.472656 9.405809 6.963382 10.593958 7.252889 9.039105 10.407872 7.641454 1.149585 8.727973 6.635268 10.310102 10.429791 8.013787 9.901981 9.947667 6.160827 12.358153 10.161876 10.703710 10.048580 10.830839 10.769820 10.465882 7.907824 -1.850480 9.750689 7.623306 10.624574 5.829081 11.178543 9.514282 6.511544 14.184936 10.147486 10.414336 12.023525 11.306790 10.121144 1.319502 TCGA-A7-A4SA 40 0 NA 454 breast stage iib t2 n1a m0 female 2012 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 1 4 NA NA 3 4 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.525908e-06 6.935946e-07 9.7173592 9.5806119 11.6493669 8.2788114 8.3944854 9.6634204 9.8142453 9.5981744 10.1361734 10.1786804 10.7064459 10.0267537 1.7267876 13.5112811 2.9491801 9.6236194 5.8283193 8.4272223 10.7973507 12.6512239 1.7267876 13.4520068 5.6336724 9.3520529 10.3760387 4.2711044 -0.8583056 10.1779936 10.7314712 3.2292803 8.6653821 6.8353064 NA 3.7267876 9.5059546 9.1957460 9.5628329 9.6012517 9.7711766 11.7888287 4.5680868 10.4220108 14.6522752 9.2569288 10.7675288 10.5336006 10.6648918 5.8560644 0.1418251 8.4614921 11.9499798 NA 10.1800531 5.9998016 7.1916683 5.5341363 9.5743619 11.9647891 9.3897475 11.7856762 12.6620704 8.8387876 10.0843346 9.8758267 10.9535961 10.5591451 4.8697382 11.4968958 9.2079092 -0.8583056 10.5357467 9.0562052 3.4823837 7.1474441 10.4872253 9.5059546 10.6371754 9.7784447 0.1418251 7.3609884 13.0046511 12.2060575 9.8883343 9.7838717 0.02440800 0.01992300 0.44342000 0.01558700 0.01405100 0.01391100 -0.03079500 -0.01161100 0.00041593 -0.41481000 -0.41481000 0.43952000 0.26726000 -0.40528000 0.01153900 0.01153900 0.01153900 -0.02370300 0.01126100 -0.40628000 0.40561000 0.88486000 0.09277500 0.21699000 0.21699000 0.04471500 0.04471500 0.04471500 0.69279000 -0.41619000 -0.38470000 -0.02013800 -0.40849000 0.01391100 -0.44048000 -0.43040000 0.00791750 -0.01161100 0.00041593 -0.02016500 0.00235810 0.60882000 -0.40937000 -0.40694000 -0.40694000 -0.00581400 -0.00581400 -0.40528000 0.32221000 -0.41267000 0.01153900 -0.39619000 -0.39619000 -0.02370300 0.01126100 -0.40329000 -0.40628000 0.31851000 -0.01697900 -0.40760000 -0.42123000 0.21699000 -0.40108000 0.04471500 0.04471500 0.69279000 -0.03081300 -0.02999400 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.124 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 -0.233 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.124 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 -0.233 9.6545605 13.2864783 4.7267822 10.8688896 5.5491732 10.1418200 4.4637467 0.1418251 8.6692972 7.8765298 NA 8.3298403 4.1418170 10.1704168 9.4949668 5.1418210 9.4260657 9.3826113 8.6094255 10.8146873 9.7845306 7.6575200 10.9588037 3.1418251 7.9491748 10.2444520 4.2711044 1.4637271 11.0168014 3.2292803 12.0162251 11.6792811 7.7675290 9.6306643 10.5894199 9.6624387 5.5512115 1.9491614 0.7267440 5.2079085 8.9667788 9.8151292 10.0236988 6.0843343 8.6822580 6.8832872 9.7445189 4.8422598 9.9683686 NA 10.8624918 3.6653814 4.2292803 8.4629590 6.7933744 5.5847641 10.1875797 8.7766311 6.9998005 NA 13.0731116 1.4637271 10.3766375 NA 6.9747106 5.1418210 7.9747100 8.3754396 12.2204779 6.8071565 8.3634072 13.5112811 9.8294932 10.0252271 12.6512239 13.6684415 9.1119259 10.0989220 12.5782713 10.6089160 8.4614921 9.1076042 -0.8583056 7.3609884 11.2880705 11.3915261 6.3609893 8.7192488 8.1446348 5.5680838 10.4873916 8.5889031 8.7002406 10.7064459 6.3706386 1.9491614 7.4637483 7.5258269 11.4395961 10.6180599 7.0244626 8.2890248 10.2877522 7.4993724 11.9623979 9.5628329 10.8265687 9.8992101 11.3733413 10.4507278 10.6471354 8.1641879 0.1418251 9.4966093 6.9935691 10.1800531 5.4993708 11.1648813 9.5743619 7.5125074 13.0812156 9.5899363 9.8195397 12.3541644 10.9394816 9.5774902 2.1418251 TCGA-A7-A4SB 56 0 NA 418 breast stage iiia t3 n1mi m0 female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.387189e-07 9.4078063 9.4756404 11.2430886 8.0375568 8.6162055 8.5448667 11.2307431 10.3140468 10.0787018 10.8024428 11.8857286 10.3442850 1.1983684 13.7467534 3.1983527 9.6402596 6.5559051 8.8511978 9.4307739 12.9058199 0.1983684 13.9728312 4.3682795 9.5180703 10.3801264 4.7833152 -0.8016316 8.6329810 9.2193329 -0.8016316 7.5292697 6.9330627 NA 4.3682795 9.0185318 10.9603196 9.4952692 10.2393275 9.9739632 11.2262589 12.3277970 12.0808049 14.1380699 8.4116275 11.3308527 10.1283510 10.9232931 6.4744766 0.7833309 8.0501022 9.5613926 -0.8016316 10.1276114 3.8422045 4.4462827 4.9532420 10.0524421 12.2558371 10.6214689 12.8361099 12.5701296 8.9125984 10.4616222 10.3055700 11.1905832 10.6387031 4.5906679 11.6572721 12.6654490 3.7833204 10.1919989 8.7605952 4.4124767 3.1052423 9.6547073 10.3912622 10.9939868 9.4872190 1.5202965 6.2644426 13.0236099 12.0155365 10.3682779 9.5981649 0.0171240 0.9587700 0.9733700 -0.0022168 -0.0154660 0.4780400 0.5089800 -0.0142280 -0.0246200 -0.0012473 -0.0012473 -0.0012473 -0.5066000 1.3092000 0.0157270 3.6569000 3.6569000 0.4801800 0.4801800 -0.0118870 -0.5077300 0.0000000 -0.4754300 0.3759400 0.3759400 -0.0060904 -0.0060904 -0.0060904 0.0533790 0.0171240 0.0171240 -0.0012473 -0.0154660 0.4780400 0.4780400 -1.0539000 0.4849200 -0.0142280 -0.0142280 -0.0246200 0.4881300 0.4881300 -0.0012473 -0.5022500 -0.5192500 -0.4948200 -0.4948200 -0.5019400 -0.4784900 0.0175440 -0.0120240 -1.0375000 -1.0375000 0.4801800 0.4983900 0.4983900 -0.0118870 -0.5077300 0.0091705 -0.4782800 -0.4754300 0.3759400 -0.5038000 -0.0060904 -0.0060904 0.0533790 0.5089800 -0.4767000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.499 -0.499 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.470 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 0.000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.499 -0.499 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.470 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 0.000 7.2372721 11.6882009 9.1983530 9.7982657 3.9532373 11.3493695 0.1983684 NA 9.1813466 7.2095801 NA 7.1583552 2.1983684 9.8987927 9.7355714 6.0438432 8.6098639 9.6267131 8.5202812 10.1806335 10.2203254 8.1320437 10.8931461 1.5202965 8.7510221 9.8547779 4.9262746 NA 10.8286201 2.6577772 10.9536578 11.7297344 7.3582239 10.1481796 7.9532402 9.5874464 3.8422045 -0.8016316 1.5202965 2.0057233 8.8258867 9.7179893 10.2214142 5.4462794 9.4844949 7.7644072 9.9952037 4.9797144 9.7710531 NA 10.6480175 2.7833100 4.7219140 9.9130192 6.9148635 4.0057054 8.7510221 8.7889401 8.3682781 0.1983684 13.7402965 NA 10.5292698 -0.8016316 6.7982657 5.9532396 8.4150986 7.4367573 16.653416 7.594958 8.781436 13.746753 9.958241 10.577731 12.905820 12.550534 13.124659 10.337265 12.847609 9.890968 8.050102 8.659833 NA 7.670028 11.382608 10.3900291 6.8056833 8.4814414 8.4053674 8.5021337 9.6072452 5.0563321 5.7682081 11.8857286 7.9698424 NA 7.0687181 8.0249014 11.5340224 9.6140947 6.7982657 9.6991949 8.8404047 4.4078082 14.1653103 9.4952692 9.9305203 10.1720503 12.0704506 10.7051564 9.7258299 6.7757815 NA 8.8989139 5.8848543 10.1276114 5.3276371 11.1644979 10.0524421 6.5733927 13.3661631 9.6811609 9.1684588 12.4000174 11.0640862 9.4580963 0.7833309 TCGA-A7-A4SC 62 0 NA 446 breast stage iib t3 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA NA 2 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 2.427581e-07 9.6227152 9.6866621 11.5613147 9.4960335 8.2188833 9.5635140 11.2424096 9.0890333 10.8033805 9.7440215 11.3331793 10.1244710 2.2048606 14.3806461 3.4527931 9.6384482 7.3897380 8.4786584 9.7116661 12.3994657 2.0122111 12.8839029 7.8414876 9.0573455 11.1963846 3.7284212 NA 8.9344835 11.2966287 5.2048645 8.6142538 6.7440211 0.7898544 4.2923253 10.2355299 10.4977594 9.2118900 10.5869463 10.6886785 11.5651611 2.0122111 9.2104873 14.6353153 8.5767481 9.5324153 11.3763523 11.2216710 6.7671052 5.8342182 8.5864056 12.2886744 NA 10.3192557 5.0875053 6.0503537 4.5971795 10.4698917 11.7464434 10.3990040 13.0499607 12.8339916 8.5132017 10.6876707 10.4357478 10.9614190 10.9467510 5.2272289 11.2756545 12.5545586 NA 10.5891068 8.6457319 3.8492988 5.7126563 10.5006317 9.4264499 10.3653645 9.4681320 2.7898336 10.7474110 15.1250760 12.8242803 10.4954576 9.4240313 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0361700 13.3764305 6.5447126 10.3068383 4.9053028 10.9899064 3.5267950 NA 8.8966061 7.9730470 NA 8.2808765 4.6967172 9.6110678 9.9605848 2.6643008 10.4698917 10.2709519 10.9821180 9.5820733 10.3746562 7.9496966 11.2427528 3.5267950 9.9935811 9.8451077 4.9053028 NA 10.8653043 4.9597516 12.0844459 11.9649589 7.9664137 10.1267037 7.8948608 9.4960335 7.5535909 0.2048919 2.3747891 0.7898544 8.9208247 9.4167511 10.6509121 6.0996802 10.2677386 6.9327829 9.7037119 6.9191076 9.2923255 -0.7951081 12.1799942 3.2923253 5.3341463 9.3611354 6.7444087 4.4902620 9.1102497 7.8983499 5.7440211 0.7898544 12.8111522 1.5267700 10.3068383 NA 7.8451074 6.4622503 7.2048626 8.2763250 14.424075 5.313387 8.364734 14.380646 10.365995 10.983351 12.399466 11.551930 9.155973 11.237253 13.781996 11.461956 8.586406 8.040913 1.204892 6.999278 11.246864 11.5346590 6.1590600 8.4902649 8.8559143 7.7047088 10.3543876 7.6142534 6.9327829 11.3331793 7.8983499 0.7898544 5.3546108 6.9897589 12.1460938 10.5296059 8.0472128 8.4480366 11.5936872 5.4527898 12.6154479 9.2118900 10.2729691 10.5502679 11.5228405 10.6200763 10.9972463 9.0250415 NA 10.5296002 6.4240319 10.3192557 6.3341463 11.0357740 10.4698917 7.2655588 12.8899400 9.0202460 10.5982532 13.1671261 11.0409130 10.1949667 2.5267950 TCGA-A7-A4SD 52 0 NA 441 breast stage iia t2 n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 3.467973e-07 9.495636208 9.415920457 11.349256456 9.124661575 8.006824799 8.908683833 11.034805839 10.391548210 12.924373060 13.639981819 10.716891980 10.240138633 -1.007231569 12.324980953 1.800164779 10.575416906 6.152676269 8.167730236 10.114985369 5.058892246 -0.007231569 9.666996725 9.827275530 9.905177430 10.637111448 6.893671639 3.636659419 12.882280897 10.454283972 -1.007231569 7.380822072 8.583391588 0.992768431 6.964347800 9.743511434 11.124661446 9.057547207 9.191249504 10.293729012 10.918729767 4.992804679 5.636659419 15.303115503 8.055120259 9.774155990 10.972229677 10.771292365 3.800154423 NA 9.152675762 11.277339480 -1.007231569 8.627615592 6.806585709 7.427432697 6.806585709 9.322600820 11.649229363 9.526134167 11.336267820 12.741940672 7.926495260 10.903447240 10.767817979 10.886485217 11.429255768 5.435748591 11.915388914 6.700163638 NA 11.031380584 9.482652488 4.223159937 6.090836497 11.349256456 10.426389937 10.266017328 9.566451771 4.240734100 7.700163638 13.151808567 12.690532290 10.348155609 9.808187774 0.34809 0.72090 0.18115 0.72648 0.76789 -0.61480 1.90060 1.18280 0.81569 0.28800 0.28800 0.28800 1.14050 -0.18812 0.32686 -0.13318 -0.13692 1.00280 -0.14710 0.49330 -0.24358 -0.20972 -0.16512 -0.16512 0.30551 -0.17906 1.04760 0.76386 0.78039 0.28388 0.34809 0.00000 -0.17527 -0.63870 -0.61846 -0.63775 -0.15031 0.78811 0.34123 0.30623 0.28673 -0.10974 0.20736 0.52833 0.52833 -0.26818 -0.23913 -0.83713 -0.67216 -0.56943 -0.13318 -0.13692 -0.13692 1.14070 -0.14710 -0.17337 -0.28673 -0.23510 -0.19438 0.69500 -0.16512 -0.15492 0.18690 -0.57734 0.76386 0.76042 -0.61519 -0.20049 0.039 -0.179 0.190 -0.137 0.843 -0.160 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.750 0.750 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 -0.396 0.351 0.039 -0.179 0.190 -0.137 0.843 -0.160 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.750 0.750 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 -0.396 0.351 8.568343783 13.737112787 0.577730931 9.312476630 4.665227889 11.810787420 NA 2.693252762 9.362401943 10.080930221 -0.007231569 7.796935781 5.240730285 10.329868863 9.379744843 1.992804679 6.172713519 9.193703007 7.570233697 9.431596427 8.395390180 8.350356684 12.022436825 -1.007231569 8.672284602 10.746439077 1.992804679 -1.007231569 9.814578461 0.577730931 11.849619065 13.467524447 7.197375946 9.936051909 11.129154843 10.434711201 5.863170328 3.385127280 -1.007231569 4.850784424 8.847672827 9.116925861 8.772523745 2.162725653 11.136465124 6.800159601 9.592717334 5.760990001 9.524185944 0.992768431 12.152202848 4.800159601 4.080265388 9.142449944 6.963485684 8.727514129 9.512440833 7.402195189 10.282823294 4.080265388 12.837608323 NA 11.220119575 NA 8.819353007 4.162725653 8.088201503 7.480644814 12.160310 9.134912 7.468538 12.324981 10.396882 10.797339 5.058892 6.952806 9.039929 11.290867 14.012265 11.901385 9.152676 7.226424 4.636659 8.122088 10.480142 11.027260 2.314726 9.758505 8.512441 8.770882 9.833047 8.042653 5.838294 10.716892 11.793907 6.734272 5.577767 10.290976 11.912413 10.381898 7.984326 8.085562 9.401134 7.581519 10.496506 9.057547 10.100675 9.678429 11.605443 11.415395 10.796532 8.908684 NA 9.852999 10.024161 8.627616 7.296585 10.548832 9.322601 7.926495 13.531600 10.853504 10.659028 13.811586 10.806986 9.037199 5.182629 TCGA-A7-A4SE 54 0 NA 644 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.219503e-06 4.855162e-07 9.635518 8.941183 10.902802 9.072727 7.761758 9.243001 8.563532 10.037731 11.459496 11.871977 10.226850 10.413391 1.552328 11.720475 3.137274 10.826100 7.280225 7.088357 8.605416 7.236001 NA 8.596699 9.207656 10.392585 11.024792 4.985264 -0.769551 10.654018 10.838169 3.622696 9.916877 8.971843 0.230326 6.252745 9.939460 11.194717 9.231784 9.840478 9.797382 10.904127 4.137266 8.359660 15.224111 8.200482 10.921247 10.632856 10.636050 5.252745 -0.769551 9.161114 9.728228 NA 10.410907 6.263799 5.359658 6.359660 8.603241 11.714696 10.122160 12.720600 12.859847 8.288368 11.446516 10.533164 11.330053 10.855629 4.587929 10.673320 9.528439 1.815329 10.415871 9.190378 4.809615 4.689808 12.356435 9.905451 10.349966 9.320489 2.037734 8.991928 13.319661 12.380758 9.853343 11.201561 0.400110 2.218700 1.039600 0.642490 0.472380 -0.372450 -0.388730 0.776560 0.426620 -0.396420 -0.396420 0.782670 -0.387160 -0.374930 1.097500 0.338530 -0.363400 0.385510 -0.348360 -0.057520 -0.371320 1.163400 -0.250230 -0.250230 -0.211310 0.562940 1.464600 -0.410030 0.802860 -0.799120 0.402110 -0.389730 -0.347100 0.502030 -0.430900 -0.388730 -0.390740 -0.819740 0.431930 0.411110 0.337230 0.468320 -0.368630 0.698770 -0.079077 -0.053206 -0.138710 -0.374930 -0.376200 0.267650 0.338530 -0.367270 -0.365560 0.392630 -0.348360 -0.348360 -0.084323 -0.376620 -0.371780 -0.359650 -0.250230 -0.250230 -0.789920 -0.425170 -0.388060 -0.358680 0.162350 0.321090 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.250 -0.250 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 0.000 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.250 -0.250 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 0.000 8.387723 14.192143 4.622696 10.243699 3.686523 12.268095 3.815340 7.819091 9.685703 11.165910 8.946338 10.163838 5.515779 10.624303 9.885907 4.784965 8.520395 9.632322 8.056925 8.015011 9.929168 7.285658 11.923210 0.230326 7.807805 10.814399 6.024792 0.230326 10.276818 4.515776 11.541557 11.184573 8.224730 10.010096 10.764193 10.122919 4.622696 3.317839 NA NA 8.897488 9.074298 6.579105 5.552303 7.713305 6.420201 10.312525 4.088354 9.193272 1.815329 12.251183 3.985264 4.689808 10.628901 6.994651 2.815329 9.538715 7.552305 4.689808 6.449545 13.634254 0.230326 10.787840 NA 8.883221 4.137266 8.835856 7.024792 13.066670 9.023167 7.596699 11.720475 10.121401 10.710157 7.236001 12.312692 8.415252 10.743117 14.955290 12.395911 9.161114 8.236001 3.037734 7.930816 10.999801 11.634187 4.088354 9.039340 8.813459 7.125194 10.353049 7.395283 5.113021 10.226850 10.960422 2.552303 10.043356 8.641782 11.762732 9.396539 6.263799 9.504172 8.695943 5.622693 11.087969 9.231784 9.981083 10.457992 11.710662 12.065045 10.891264 8.579104 NA 9.235636 4.784965 10.410907 7.444695 10.772925 8.603241 8.122828 13.884565 9.309861 10.064847 11.988391 11.017054 9.530729 1.552328 TCGA-A7-A4SF 54 0 NA 545 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 NA NA 1 2 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1.629947e-06 6.935946e-07 8.2966873 9.1272417 11.3690241 8.0458792 8.9931861 9.8206939 9.6816775 10.1836592 8.2551679 14.7451183 11.1408420 10.5435373 NA 15.1290385 0.7420925 7.8117716 3.9120271 7.8260209 9.6757889 12.2302732 NA 13.2666400 0.7420925 10.1287440 10.5229114 5.9515505 1.1571084 8.4285989 10.2577981 NA 9.2617346 6.2339513 -0.8429563 1.9644726 9.6479867 10.3401508 9.4250929 10.2001631 9.7439755 11.5155122 10.3075178 10.6860782 14.2595626 6.4378136 10.3793269 11.0378672 10.2386192 2.7420925 4.7420979 7.4192304 10.4014996 NA 10.9564174 3.5494474 5.7718460 6.4517568 9.1069625 11.8191365 8.9979136 10.2564836 12.5068317 8.8260209 9.8189138 9.7298360 11.1232807 10.4074342 4.6806957 10.4303486 10.9608633 NA 9.6875421 8.3568080 4.0161130 4.5146904 10.7083634 9.3081524 10.5681171 9.4700188 1.1571084 7.3617070 11.9725191 11.2442671 10.2238977 10.0435945 -0.5989600 0.1238800 0.7205100 -0.5671500 -0.5204100 -0.4906800 0.7220600 0.2151400 0.2151400 -0.5156800 -0.4856500 0.1860100 0.5182100 0.0000000 0.0555150 -0.0408880 1.0680000 0.2193100 3.6569000 -0.5195000 0.0572260 -0.5542700 -0.4004800 3.6569000 3.6569000 -0.5977900 -0.0687970 -0.0687970 1.7412000 -0.6556600 -0.5989600 0.0342140 -0.5338900 0.0972790 -0.4906800 0.1898000 0.7788700 0.2151400 0.2151400 0.0395220 0.5374900 0.5553800 -0.5386500 -0.3327200 -0.3327200 -0.3327200 -0.3327200 0.0000000 0.0000000 0.0303030 -0.0195890 -1.1139000 -1.1302000 0.2193100 -0.3077200 -0.3077200 -0.5258300 0.0304670 0.5788000 0.0318590 -0.2435000 -0.4546900 -0.5354100 -0.5977900 -0.0687970 0.0094491 0.0963800 -0.5713000 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.519 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 -0.222 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.519 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 -0.222 7.8713810 12.0399698 6.8644945 8.3738818 3.4254190 11.6283029 3.4050666 NA 9.6499905 4.9644911 NA 6.5494536 1.4790753 10.4722854 9.0923007 6.3665897 7.6688885 8.7955718 7.2656600 11.9141090 10.1007568 7.5146880 9.1286793 1.4790753 9.2259140 9.7231898 2.4790753 NA 10.6514914 0.7420925 11.5179829 11.9462618 6.4332599 9.7718456 7.8644951 10.2922037 6.5234585 1.1571084 0.1571731 3.9120271 9.0489195 9.6698763 9.6777545 0.7420925 10.2026020 8.5014316 10.2252423 5.0878744 10.0610177 NA 10.4198179 3.1571407 3.6806957 10.4257596 7.5688165 4.6806957 8.4402243 7.1905586 7.3518924 NA 12.6765263 NA 11.0823193 NA 7.2708784 3.4790624 7.6962943 6.2232256 13.068715 6.951552 8.806392 15.129039 9.650991 10.652991 12.230273 10.593327 10.136561 10.382946 12.163462 8.941771 7.419230 9.826021 2.157141 10.543537 11.134416 11.113149 7.157136 8.395541 6.376304 8.732921 10.603444 7.070025 4.857578 11.140842 5.286419 1.157108 1.964473 9.373748 8.137276 9.038250 4.442539 9.541920 10.018223 5.951550 12.059008 9.425093 10.464337 10.644473 10.567587 9.528912 10.363540 7.371455 NA 8.527649 6.223226 10.956417 5.223226 10.799639 9.106963 6.970917 12.346960 9.511385 9.152903 11.458060 11.018610 9.070025 1.964473 TCGA-A7-A56D 84 0 NA 448 breast stage iia t2 n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 1 NA NA 2 2 3 3 3 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.670339e-06 1.28315e-06 7.4448683 7.0463186 9.2162441 4.0019283 8.8092797 7.7478794 8.3682471 9.2194788 11.6849195 12.4764758 10.5597077 9.5705144 2.0019103 12.6815516 2.4169748 10.9083145 6.5462447 7.1718503 9.8484600 10.6825774 NA 13.8545194 8.2687113 10.6030766 8.4640862 8.2339460 NA 10.0399293 12.8349467 NA 9.2275341 4.9405239 NA 5.4393306 7.1785135 8.9227741 8.0608186 8.5228710 7.6837491 8.2275341 2.0019103 9.6672608 13.9969853 2.4169748 8.8411287 8.7745143 8.6190861 4.7023639 4.8763942 5.7388894 7.5768335 NA 10.2498524 6.0316731 1.7388975 4.9715528 7.9365985 11.2040487 10.3616744 10.8982573 11.0293702 10.0000451 9.9078133 9.3462207 8.7920019 9.0390142 1.0019463 10.6872577 8.7501177 NA 10.1260462 6.9168086 -0.5829441 1.7388975 9.2577402 8.2593125 9.2545903 7.4776587 5.1448825 8.7321118 12.1599033 11.0581109 8.6625149 9.4239897 -0.2648200 0.4937700 0.5088000 0.2013600 0.7661800 -0.6210200 0.3810500 0.1094900 0.0922170 0.0695210 0.0695210 0.0695210 0.6108100 -0.1425800 -0.4558700 0.0290390 0.0290390 0.1435400 0.1435400 0.0052704 0.7856200 -0.1323900 -0.6747200 -0.5870600 3.6569000 -0.5075400 0.4417200 0.1857700 3.6569000 -0.6253200 -0.2648200 -0.4260400 -0.6367100 -0.6210200 -0.6210200 -0.3896800 -0.3898500 0.1094900 0.0922170 0.0922170 0.7949000 -0.0380380 -0.6366700 0.1203400 0.1203400 0.1203400 -0.0290420 -0.1425800 -0.1378100 -0.5425500 0.0290390 -0.6190200 -0.6190200 0.1435400 0.1435400 0.1435400 0.0000000 0.7856200 -0.5380500 0.0592180 -0.6800400 -0.5870600 -0.8042700 -0.6117900 -0.1565600 0.7546800 -0.0284960 -0.8101400 0.444 -0.138 -0.456 0.000 0.144 0.144 0.000 0.786 -0.106 -0.096 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.266 0.810 0.810 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.057 -0.324 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 -0.159 0.444 -0.138 -0.456 0.000 0.144 0.144 0.000 0.786 -0.106 -0.096 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.266 0.810 0.810 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.057 -0.324 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 -0.159 8.4937778 13.8223033 4.0019283 9.9365986 -0.3566055 11.2648028 2.2243182 NA 9.6373407 8.6409639 NA 6.3827468 4.1718473 10.5705144 8.7138786 3.6648924 6.9405239 7.5307044 9.1634766 12.2132048 8.4281897 6.1448825 10.1130605 1.0019463 6.0608191 10.4106084 NA NA 9.8916823 0.4169478 12.8681735 12.5329814 7.1851470 8.8284732 11.0385564 10.9128174 2.4169748 2.0019103 NA 4.1718473 9.3117801 12.7097154 9.6660759 -0.5829441 8.6291428 10.2186708 8.9007781 5.2749437 8.9599941 NA 9.9868179 1.0019463 3.5044297 10.1337219 5.8263527 6.0316731 10.0390142 8.2530126 11.0933603 2.5868848 13.8870492 NA 11.9732289 NA 5.4169613 4.0019283 7.7963408 8.1174021 13.241069 7.959994 6.940524 12.681552 9.792002 10.813567 10.682577 9.804980 8.761258 9.464086 12.334894 7.765691 5.738889 10.865079 4.224318 10.092919 7.994391 9.711583 4.702364 7.761258 8.249853 6.655368 9.170196 6.596871 7.888637 10.559708 9.353600 1.416948 7.851590 7.836880 8.522871 9.449008 5.546246 11.791459 2.001910 6.299606 10.987449 8.060819 11.088061 10.368976 9.883549 9.422587 10.149130 4.626416 7.884568 9.769867 6.868173 10.249852 7.765691 10.106087 7.936598 7.376964 14.088116 10.539143 9.264020 11.223915 10.841654 8.606787 3.416961 TCGA-A7-A5ZV 62 0 NA 368 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating carcinoma nos 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.404326e-06 1.387189e-06 9.9127072 8.3390821 9.5105749 8.1524745 9.2741174 8.1620816 8.6839775 10.5592547 11.0955374 12.3489301 9.9974336 10.2689400 1.6638455 13.0801006 NA 13.1026227 5.7681684 8.4052981 11.2233992 0.3418719 0.3418719 9.5513562 8.0900955 9.8655726 10.0458063 6.3642713 2.6638228 8.6411107 11.1387536 4.8964898 9.3062436 8.5242972 NA 3.2487929 8.3808216 10.5211899 9.0967903 7.3475275 9.6513791 11.0638564 0.9268344 2.3419004 14.2972803 8.0335766 12.2435240 10.2014376 10.2367205 3.5118222 0.9268344 8.5945683 6.5898309 NA 10.1249010 3.1492594 6.1232627 4.0423467 9.2060888 11.2574088 10.0706736 10.6273050 11.8873500 9.1117405 9.5610714 9.5969314 10.2570353 9.5981115 4.1492594 11.7555307 9.2029897 NA 10.4859237 9.8810616 4.9788180 5.1998843 7.7470443 9.4903794 11.0072387 9.8936111 10.2222516 7.7597551 13.1527756 12.4438785 8.9785274 8.3808216 0.0080567 1.6128000 0.7488000 0.8643300 0.7883300 -0.0055375 2.6232000 -0.8488300 0.6987700 2.4757000 2.7727000 3.4336000 1.6205000 -0.0110600 0.8356900 3.5171000 0.8215700 1.7064000 -0.0171160 -0.0204470 -0.8100500 -0.0092666 -0.0490190 -0.0490190 0.7177300 0.6384700 -0.0960440 0.6961500 0.8252900 -0.8842600 2.3598000 -0.0662190 -0.8488300 -0.8413100 -0.8479500 -0.8194200 -0.8067500 -0.8654200 -0.0630320 -0.0329960 0.7769500 2.0047000 -0.8424300 0.8500800 -1.2929000 -0.0366740 0.6511700 -0.0110600 -0.0125760 -0.0131270 -0.0734470 -0.8205600 -0.8423500 1.6902000 -0.0206870 -0.0206870 0.0153080 -0.8238300 -0.8285500 1.7451000 -0.0490190 -0.0490190 -0.8188400 -0.9954800 -0.0960440 -0.9309300 0.0553730 -0.9396100 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.834 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 0.138 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.834 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 0.138 7.6365238 13.6672083 -0.6581281 10.6856437 3.3722417 11.7201977 0.9268344 7.6502418 9.3206133 7.4399347 2.5118222 10.0397391 7.4133648 10.1419938 9.7256071 4.9857600 4.1998843 8.3944708 6.5118285 10.9835030 8.3694220 7.4240520 10.3248963 2.5054083 8.1779532 9.8327536 1.3419288 NA 9.6468245 0.3418719 11.5634899 12.7539433 7.6861987 9.6353744 7.7723555 9.7125903 6.4079917 0.9268344 NA 0.3418719 9.4916499 9.6928420 5.3419039 4.9268676 9.9986584 8.6994548 10.3327159 5.3862971 10.8382573 NA 12.7650187 2.9268724 2.8013242 10.3494908 6.8777222 0.3418719 8.2306459 8.2184199 1.6638455 10.4079920 12.9299146 NA 11.9886865 NA 6.7512937 2.1492594 9.0867365 8.5218120 12.8164555 7.7555306 7.9003234 13.0801006 9.6353744 10.7000045 0.3418719 10.1191581 9.2184196 10.9816957 12.7342202 10.9920570 8.5945683 7.4763290 1.9268724 7.9748981 9.4891078 10.758173 3.589835 8.079995 8.010788 8.266715 9.602458 5.956612 7.561071 9.997434 4.149259 3.149259 5.407992 9.317163 11.652800 10.731534 5.149259 8.855630 6.881061 4.248793 13.962626 9.096790 9.866445 9.993851 11.253669 9.405298 10.917442 6.768167 5.511829 9.432002 2.663823 10.124901 9.612198 10.219187 9.206089 7.455645 14.378291 9.531727 9.829743 12.031246 9.720198 9.909859 1.663846 TCGA-A7-A5ZW 47 0 NA 326 breast stage iia t1c n1a m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 10.2493471 9.5008646 11.1436531 8.1501895 8.5220554 9.1005759 10.2812861 9.8274105 10.6166156 12.5943840 11.1810475 10.2025354 2.6446639 13.0915971 1.8372974 10.0449311 8.0172154 8.4185071 8.8344859 12.7543056 6.9510492 12.9807695 6.1592356 9.4975253 10.5711693 5.7561693 NA 10.1954083 9.3618482 1.1592417 8.6654432 8.2551589 NA 2.6446639 9.8224370 10.0637188 10.2977624 10.9241063 9.9749382 10.7494474 9.1915560 12.3688099 14.5265948 6.9461963 9.4250841 10.3657607 10.7823846 5.0072314 3.6952923 8.5720161 11.0549614 0.8372974 11.1552844 5.2123475 6.9087685 4.2967364 10.4311645 11.9667506 10.7739445 13.0843440 12.8120796 8.6170259 11.2719348 10.9231308 11.4964105 9.9921247 4.2967364 12.1690633 11.5077415 0.8372974 10.2161433 9.0864200 3.1599520 5.0271319 10.8436326 9.9902251 9.8548109 9.7516917 4.0072314 9.2583194 13.1711607 13.1739526 9.5299220 10.1180774 -0.00346270 0.55957000 0.55957000 -0.00124730 -0.00521510 0.00152550 -0.00429290 -0.00726080 -0.00742690 0.13865000 0.13865000 0.13865000 0.04741000 0.04741000 0.00305220 0.00305220 0.00305220 -0.00512270 -0.00626340 -0.00745670 -0.00338720 -0.00304750 -0.00304750 -0.00304750 -0.00304750 0.00291330 0.00291330 0.00291330 0.00416320 -0.00346270 -0.00346270 0.00249690 -0.00521510 -0.00166290 -0.00719580 -0.00429290 -0.00429290 -0.00726080 0.00000000 -0.01009400 0.04996600 0.04996600 0.13865000 -0.00191870 -0.00191870 -0.00191870 0.00291330 0.04741000 0.04741000 0.00305220 0.00305220 0.00305220 0.00305220 -0.00512270 -0.00626340 0.00374650 -0.00771960 -0.00166290 -0.00304750 -0.39964000 -0.00304750 -0.00304750 0.00097064 0.00291330 0.00291330 0.00416320 -0.01292400 0.00138680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.220 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.220 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 0.000 8.7709972 14.1467119 8.0072314 10.3593976 3.0072314 10.2025354 1.4222868 0.8372974 8.7168898 8.7709972 NA 7.8624464 3.3608699 10.3150649 9.5481129 2.6446639 9.3880535 9.6087961 9.7878624 10.2895478 9.5099353 6.9300631 11.1093531 3.0072314 9.4847649 9.7936828 7.2677596 NA 10.3985945 3.2967364 13.1709511 12.0302158 9.0673271 10.8478346 8.0876050 9.2413838 2.4222599 2.1592417 -0.1626218 4.0467617 9.0009563 9.8330737 9.6526899 5.3451018 7.5744187 5.8373075 10.7434455 5.5787727 9.5394793 NA 10.4085851 3.5921939 4.0072314 10.2164899 5.5434216 3.0852377 9.1261727 8.0540524 6.0369780 NA 14.1296282 -0.1626218 10.3564513 0.4222330 9.3559598 6.1040934 8.2740179 9.2274756 12.274822 4.618667 9.015971 13.091597 10.463928 10.899015 12.754306 12.085382 8.895298 10.208539 13.266779 11.381788 8.572016 11.287229 -1.162622 7.548113 10.769890 11.098520 5.768044 9.536879 9.192658 7.317087 10.274086 6.263572 7.488358 11.181047 7.444637 2.924765 8.115756 4.481738 11.394770 10.483865 8.479358 8.673357 11.039737 6.203628 10.802799 10.297762 10.567777 9.317087 10.953975 9.670197 9.501754 8.349059 -1.162622 9.537027 5.407162 11.155284 8.542939 10.656288 10.431165 6.682797 14.697787 10.338646 10.890893 12.530576 10.994338 9.299809 1.837297 TCGA-A7-A5ZX 48 0 NA 336 breast stage iiic t2 n3a m0 female 2012 NA yes infiltrating lobular carcinoma 21 white not hispanic or latino NA NA 2 6 NA NA 3 3 3 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 10.0662544 9.0215161 11.2707583 7.5688841 8.5843473 9.4000277 10.6863930 10.0152546 10.3757950 11.9124147 11.2776709 10.4565776 2.1703417 13.7522630 3.1703417 10.4578374 7.8606506 8.9505019 9.8510941 12.7140698 3.1032291 13.2748741 6.3475275 9.6135497 10.5342706 3.9963074 NA 9.0249200 8.4320023 4.3256167 8.1266451 7.9870275 -1.2891219 3.2344707 10.0198111 9.6177938 9.3108161 12.0902817 10.0601845 10.8504546 9.2520000 11.7825333 14.6407396 7.7839202 10.0908231 10.0701038 10.5665504 5.7443253 4.9007268 8.5750895 12.6648269 NA 10.9732918 5.9105768 4.9776921 3.7109001 10.1626296 12.1426620 10.7228294 13.0142560 12.8491751 8.6087486 10.8498150 10.9331458 11.2515157 10.5146308 4.3833310 12.3361555 12.1680276 -0.2891219 10.2290646 8.7094936 4.8995430 3.7983616 10.1261170 10.1053660 9.9922538 9.2817078 5.0328326 10.1460526 13.6792551 13.4780532 10.0815908 10.3529550 0.0045800 0.4826300 0.4825100 0.0058309 -0.0063629 -0.0058140 -0.0016629 -0.0089906 -0.0089906 0.0000000 0.0000000 0.0000000 -0.0227440 -0.0167520 0.0049969 0.0049969 0.0049969 -0.0150320 -0.0150320 -0.0078863 0.0040297 0.0076392 -0.3776300 0.0171240 0.0171240 0.0125160 0.0125160 0.0125160 0.0144700 0.0045800 0.0045800 -0.0071958 0.0058309 -0.0058140 -0.0058140 -0.0016629 -0.0016629 -0.0089906 -0.0089906 -0.0089906 0.0059700 0.0038098 0.0000000 -0.0033243 -0.0033243 -0.0033243 -0.0033243 -0.3956400 0.0097276 0.0049969 0.0049969 0.0049969 0.0049969 -0.0150320 -0.0150320 0.0120970 -0.0082788 0.0040297 0.0076392 -0.3689500 -0.3776300 0.0171240 0.0043021 0.0125160 0.0125160 0.0144700 0.0010384 -0.0195890 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6267826 13.7181496 8.0101113 10.6792101 2.9776829 10.7863824 1.7109221 -0.2891219 8.9846990 9.2432592 0.7108781 8.7058508 1.2958406 9.7408807 9.8707747 3.4113449 9.1610835 9.5912521 10.9136394 10.7066704 9.5886706 7.6475412 10.4208487 2.5698799 9.3457144 10.1387399 5.4113415 -1.2891219 10.4910329 5.0328326 13.1473546 12.0765423 8.3547594 10.7158259 8.1266451 9.4607727 5.1202939 1.8808422 0.2958406 -0.2891219 9.0271847 9.8926767 10.2422848 5.8504544 8.2531615 7.2186979 10.1972355 5.0684559 9.9776898 NA 11.3873012 2.4113449 5.2186998 9.7897480 5.3030610 4.3833310 9.2383804 7.0772259 7.3938975 1.7109221 14.0724016 0.7108781 10.5516813 NA 8.2635725 6.1947194 8.0574172 8.8555615 11.6322087 3.7109001 8.7890540 13.7522630 10.4963558 10.4527915 12.7140698 12.2931629 8.9404913 10.1413559 13.0650149 10.7525625 8.5750895 9.0009222 0.2958406 7.9540771 10.6636446 11.194467 6.568885 9.251031 8.872035 7.145532 10.440112 6.479088 7.662188 11.277671 7.840186 5.699588 8.592017 5.389539 11.376683 10.216219 8.122414 9.548531 9.804981 4.819428 11.539062 9.310816 10.552861 9.991674 10.945721 10.415672 9.925222 8.222656 NA 9.720123 7.077226 10.973292 6.727712 10.869197 10.162630 6.332955 14.647886 10.051866 10.904121 12.646345 11.166487 9.832437 1.295841 TCGA-A7-A6VV 51 0 NA 313 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1761002 9.4197567 12.0119121 8.9798582 8.1373995 9.0607781 11.1405054 10.2124280 11.8529200 11.8310528 10.6199534 10.4106818 0.1638851 12.3200243 1.3863143 10.9986756 3.1639334 8.5346285 9.9761186 7.4307277 NA 9.7325307 8.0788244 9.5294837 11.4937376 8.3636135 4.8827604 10.4259264 10.7585768 1.7488905 10.0718333 7.6717357 NA 4.8269044 9.1258732 9.9745128 8.9387283 10.7344294 9.4700030 10.6972710 NA 6.2083358 16.5607355 8.4315394 9.3263326 11.0660650 10.2970834 3.3338674 6.1564067 9.0837976 12.0923362 -1.4212062 9.6068847 5.4369613 6.7539040 6.2300300 8.9989390 11.6056751 9.8713003 13.0070771 12.7487472 7.3068993 10.5609027 10.3918861 11.2115196 11.3742067 4.6664442 11.5339020 10.3187594 1.1639495 10.3818989 9.7108357 3.1044205 5.3991574 9.8516085 9.4933639 9.6130900 9.6888094 6.4493435 8.6082659 12.9310222 12.5898564 9.6671044 10.6158392 0.1751300 1.2481000 -0.7827700 -0.2795300 0.6434100 0.2067100 1.1464000 0.3399900 -0.0642400 -0.3178600 -0.3178600 1.0308000 0.3336700 -1.2787000 3.4930000 0.1057000 -0.6902400 -0.3480200 -0.2920500 -0.3043700 -0.1199100 0.5438300 0.4720400 -0.3360600 -0.3360600 0.0094364 0.5164700 0.4823400 0.6492800 0.1269700 0.1751300 0.0959440 -0.3071900 -0.8403400 -0.2827500 0.6710400 -0.2859600 -1.2379000 0.0366530 0.1017600 0.1299200 -0.3894000 -0.3743700 0.5795200 0.5510700 -0.2911300 -0.3076800 -0.2953200 -0.3434300 -0.7951900 0.1057000 -0.2910600 -0.3131900 0.1644500 -0.2887600 -0.3395200 -0.2993300 0.7160300 -0.3203000 1.0342000 -0.0675070 -0.3360600 -0.3071000 -0.4036200 0.4823400 0.5048100 1.7521000 0.5364300 0.072 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.123 -0.295 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 1.146 0.167 0.102 0.102 0.112 0.112 0.642 0.959 -0.299 -0.299 0.000 0.000 0.072 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.123 -0.295 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 1.146 0.167 0.102 0.102 0.112 0.112 0.642 0.959 -0.299 -0.299 0.000 0.000 8.5170879 15.1052640 5.7688036 10.4158181 3.6290418 11.9077939 2.4858647 5.6124026 8.4291657 10.0842941 NA 9.2742069 4.6875031 10.1681616 9.8035834 4.5331771 8.1469347 11.6134338 7.3733942 9.6848873 8.3829162 7.5185580 11.7418421 1.9009151 8.4616219 10.6298477 3.9712952 -1.4212062 10.7063283 1.3863143 12.0136070 12.3811921 7.2046875 9.5074972 8.9626829 10.0151697 5.8457660 2.4858647 NA -0.4210130 8.8017737 9.6199533 6.5331755 7.6206377 9.8692684 7.2156029 9.6829221 6.2443144 10.1049888 0.9008765 12.9931354 3.7082645 5.6450675 9.3922309 7.3176451 5.7884325 9.9523877 8.4888717 7.6124019 3.7489013 13.0242523 0.1638851 10.4650563 NA 7.2228345 4.9712952 7.3733942 8.2619731 11.547667 8.479846 7.921054 12.320024 9.661128 9.931574 7.430728 11.400753 8.983056 10.330941 13.352169 11.702615 9.083798 6.573332 1.386314 7.133568 10.908775 11.258899 2.038401 8.838722 8.862067 8.597179 10.567493 7.790867 6.222835 10.619953 11.764629 NA 7.584603 10.260200 12.761140 10.649771 7.452422 8.506757 10.100579 6.405528 10.582191 8.938728 9.808999 10.124426 12.164763 12.279960 10.365657 9.159237 2.900915 9.627956 6.949666 9.606885 7.887318 10.965992 8.998939 7.868998 13.860257 10.535355 10.298795 12.603166 11.409296 8.954018 1.900915 TCGA-A7-A6VW 48 0 NA 285 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2796408 8.4455111 9.8653179 6.2071061 9.3187638 7.5611352 9.1043469 9.7037605 11.9742976 11.3356163 11.0830093 9.6517072 0.4700943 11.8313535 1.4701464 11.1316220 7.6632557 7.7799957 9.2261410 9.4616626 NA 10.0336548 8.9699865 10.5726589 9.7965702 4.2427321 1.6925165 9.5181734 11.3532931 0.8851839 9.0183204 7.4663791 -1.1149724 3.9726375 8.0921926 10.4368865 8.8552840 8.0576057 9.2591310 9.6868865 0.8851839 7.6062771 13.8148528 5.9425192 10.0934065 9.4980468 9.0860768 5.9619937 1.4701464 8.0750025 9.9930492 0.4700943 9.7746821 5.7920693 4.6131014 5.0946330 8.7890602 12.0112374 12.1456568 10.7400466 11.3520195 7.6130984 10.2547755 7.3487025 10.2149746 9.5380232 2.7920640 11.2517737 7.7860448 0.4700943 10.4846263 9.0272854 5.0636928 3.7431595 11.4170470 8.8070193 10.4277265 8.0675726 1.2070807 8.6467293 12.4236097 12.5050543 10.2300290 9.4028477 0.110270 0.110670 0.349240 -0.604000 0.094637 -0.620250 1.951000 -0.017254 0.089224 -0.021098 -0.021098 0.012376 0.761400 0.078582 0.095798 0.102200 0.102200 0.658460 -0.605840 -0.604580 -0.582740 0.134650 -0.531440 -0.531440 -0.531440 0.006109 -0.036129 0.013353 -0.584930 -0.517720 0.110270 -0.525120 -0.589900 -0.590970 -0.627600 -0.615080 -0.466850 -0.017254 0.054803 0.637000 0.143840 0.087390 -0.613740 -0.056307 -0.024388 -0.024388 -0.579200 -0.596240 0.098124 -0.595650 0.102200 -0.590290 -0.621100 0.983070 -0.592920 -0.592920 -0.580090 -0.582740 -0.594480 -0.596720 -0.531440 -0.531440 -0.624270 -0.495380 0.022725 0.147260 0.063366 -0.578750 0.000 0.000 0.000 0.000 0.946 -0.606 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 1.231 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 -0.178 0.000 0.000 0.000 0.000 0.946 -0.606 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 1.231 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 -0.178 7.1889587 13.5451741 5.3281220 9.2764218 NA 11.9215236 2.6925388 7.5786655 10.4116775 9.8070192 2.5856116 7.4351168 8.0921926 11.2950995 9.8232876 4.9512661 2.4701464 9.3820321 7.8218161 11.0657091 8.7336448 5.7053559 10.1630468 2.6925388 7.5959847 9.7478157 5.0750020 NA 9.8077627 2.3446013 13.6211044 12.3407623 7.2205689 9.0437880 12.1136963 10.8166545 3.7920640 NA -1.1149724 1.2070807 8.8144367 11.0361948 8.5236141 0.8851839 8.6124859 8.7117268 9.9532847 4.0144624 10.4994280 1.8851839 9.1259695 1.8851839 2.3446013 10.0025162 7.2611302 3.8851741 10.0964582 7.6599652 7.4776352 8.9937027 13.8401015 NA 10.8981519 -1.1149724 9.3899972 1.4701464 8.3093445 7.5994234 11.079477 8.952613 7.104347 11.831353 9.067573 11.544505 9.461663 8.113997 9.578569 10.335359 12.829707 10.849519 8.075003 9.361924 5.961994 7.705357 8.503564 10.481834 3.692528 8.651707 8.969987 7.188959 9.076731 6.633372 7.089749 11.083009 12.518968 1.692516 8.004119 9.324947 10.253685 9.272118 6.890803 9.842280 3.929573 4.862456 10.408647 8.855284 10.043157 10.488805 11.416560 10.554506 10.058231 6.743159 2.972638 9.437636 5.514536 9.774682 5.613098 9.831353 8.789060 7.989437 15.012749 10.953957 11.065709 11.665103 12.186817 8.879532 1.207081 TCGA-A7-A6VX 68 0 NA 317 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 3 NA NA 1 2 3 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7318017 9.7790602 11.0314301 8.7448446 7.9160514 8.4846928 10.8302692 9.9198900 11.0183604 13.6086839 11.9120419 10.6221962 1.7790496 12.5761138 3.0269948 9.7470070 6.8770927 7.7215750 11.9383009 12.8748693 1.5864045 13.8557506 8.1842019 9.0426112 11.2284669 7.3937705 1.1009776 9.1410041 10.6218034 2.8665322 8.8558757 6.4933063 -0.2209504 3.8234539 10.9808779 10.7588427 8.4655607 10.2354147 10.4877131 10.6012327 2.5864045 10.8892173 15.3243415 8.0232337 9.9166919 10.1995468 10.4332488 4.8234539 3.9083422 9.6594091 10.5222116 -0.2209504 10.7829295 4.8234539 5.7790601 5.4514848 8.0851219 11.7256011 10.5505498 11.2011250 12.5906357 9.3593189 10.2888353 10.2903632 11.3850027 10.9486722 5.3489158 12.6140250 11.4109194 -0.2209504 11.0919432 9.5222117 3.9889028 5.7332567 9.8737978 9.8035073 9.8179793 10.3001700 5.3789728 8.9664123 13.0747575 12.4561192 10.0644626 9.4102374 0.2151400 0.2151400 1.7513000 -0.4526500 1.6363000 -0.4790200 0.4522400 -0.0031859 -0.0865180 -0.0210980 0.7042000 0.8546200 0.5355500 0.0826210 1.2353000 0.0965250 -0.0052610 1.0390000 0.6224200 -0.1475900 0.3327000 0.4099400 -0.3508800 -0.3508800 -0.3644700 -0.3148200 0.8954700 1.0420000 0.0538010 -0.3757700 0.2151400 -0.3433100 -0.4055000 -0.8475500 -0.4854800 0.0391950 0.0535210 -0.0031859 -0.0865180 0.9075400 -0.3911800 -0.3429700 0.6240600 0.7891000 0.7891000 0.8942700 -0.3046300 0.0826210 -0.3812300 -0.8605800 0.0965250 -0.4479900 -0.4576800 1.0390000 -0.4430200 -0.4430200 -1.2929000 -0.4228700 0.0565130 0.0840650 -0.9148500 -0.3644700 -0.2356900 -0.3148200 0.1503900 0.4634800 -0.4599300 0.1285900 0.000 0.000 0.444 0.444 0.596 -0.443 -0.911 -0.423 -0.392 0.594 0.000 -0.915 -0.364 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.460 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 0.000 0.000 0.000 0.444 0.444 0.596 -0.443 -0.911 -0.423 -0.392 0.594 0.000 -0.915 -0.364 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.460 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 0.000 8.7776508 14.0152240 6.9439670 10.7695189 1.9280102 10.9802653 -0.2209504 NA 8.1009882 9.2466658 0.3640121 7.7068386 5.6370421 10.3850027 9.1778040 4.5339495 7.1799399 9.8062752 11.0443823 10.7634787 8.8961450 8.5587796 10.5542590 1.3640121 8.6385952 9.6143211 2.3640121 NA 10.1054898 3.5339495 12.0640289 12.0334984 8.1032406 10.0018551 10.5306043 9.6095755 5.0644604 -0.2209504 -0.2209504 4.5339495 8.8316284 9.6678034 11.0177635 2.3640121 9.7573060 7.8875850 10.0144762 6.4864199 9.1670776 NA 11.7332566 4.2053221 3.4795022 9.6499028 6.8065793 0.3640121 10.3177342 6.8234539 4.1009861 1.3640121 13.0007984 -1.2209504 10.9651745 NA 5.4514848 6.0078795 8.2507357 8.7038728 9.326765 7.853202 7.563695 12.576114 10.206268 11.890848 12.874869 9.527253 9.279205 11.347966 12.541442 9.168154 9.659409 9.380831 3.422919 6.685951 10.694566 10.910274 7.246666 8.831628 8.367775 8.276912 9.876842 6.254794 6.913487 11.912042 10.426519 3.026995 3.908342 8.845284 11.021043 9.886277 7.493305 8.096473 11.349153 3.586416 11.571198 8.465561 10.042329 10.025801 12.018808 9.755624 10.433696 8.624550 10.724870 9.475489 2.238481 10.782930 7.861209 10.433728 8.085122 7.998326 13.657734 9.731801 10.671224 12.630517 10.264386 9.465561 1.948975 TCGA-A7-A6VY 48 0 NA 266 breast stage iib t2 n1 m0 female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.05995386 8.69484364 10.82047481 7.82378247 9.21997533 9.13020939 10.12082832 9.97771152 11.67666573 12.25347510 10.25306626 10.13509925 0.05338942 10.66349593 2.05338942 11.20165861 5.98413132 8.56909382 8.53586594 5.91964280 NA 10.58834520 8.68153571 9.40339002 10.54491296 5.95224736 1.46842692 12.89036470 12.43033321 1.63835192 7.96428657 8.29020551 -0.53157308 7.20314143 9.07853352 10.40874497 8.90514297 8.92888726 9.28701348 10.39990764 0.05338942 6.06834406 14.74168063 7.85111999 8.53452039 10.14879089 9.82102662 4.49080115 0.05338942 8.04207849 11.79976827 NA 10.14262365 4.82598401 6.95627160 5.56646205 8.05151404 12.28801177 9.90410170 11.56102339 12.46030750 8.04586011 10.29458261 9.88131880 10.60638310 10.83092316 4.39917109 10.56514655 9.04113153 -0.53157308 10.66841036 9.51623700 2.89536079 5.36324819 8.86289395 9.08681693 11.41387525 8.98905014 0.05338942 6.20314046 12.29686543 12.56382842 10.59481323 9.55589417 -0.48428000 1.01950000 0.51002000 -0.41091000 -0.48691000 -0.49235000 0.02314500 0.09550800 0.01070300 -0.51352000 -0.51352000 0.14399000 0.34112000 0.09928800 0.03425400 0.03425400 0.03425400 0.06938200 0.04315700 -0.51032000 -0.49423000 -0.02698800 -0.51125000 -0.51125000 -0.48942000 -0.00083160 -0.00083160 0.05808100 0.05494500 -0.51548000 -0.48428000 -0.13678000 -0.41091000 0.02384700 -0.47585000 -0.49902000 -0.49141000 0.05936600 0.03651200 -0.52045000 0.00013863 0.05922300 -0.51352000 0.48045000 -0.50328000 0.03228100 -0.05320600 -0.40041000 -0.51434000 -0.51496000 0.03425400 -0.50598000 -0.50598000 0.05195600 0.04471500 0.00055459 -0.49392000 -0.49934000 0.01042400 0.03820600 -0.51125000 -0.51125000 0.03171800 -0.51784000 -0.46387000 0.01810300 0.01098200 -0.52379000 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.491 -0.491 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.491 -0.491 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 -0.369 8.6483403 14.4851526 2.9278585 9.6124522 4.2886096 11.7410612 2.7903550 5.0382869 9.7056414 8.6181784 6.1895301 8.2183007 7.9319560 10.7807472 10.0895675 4.4457135 5.1826764 9.8936472 7.8671749 10.5052918 9.9380529 7.1408563 11.0191782 1.2757818 6.9482119 10.0263736 0.4684269 -1.5315731 10.6833576 3.9602800 11.5152144 12.9899091 8.4313275 9.6656481 10.4894114 9.4620775 3.0533894 3.0533894 -1.5315731 6.0230202 9.6687170 10.0780719 5.8434714 3.9602800 11.2940799 8.4880221 9.9642864 5.9522474 10.4663165 1.0533894 12.4334039 4.7903602 2.7903550 9.5629115 7.6562532 9.0739110 9.4449956 8.6028577 11.1952882 7.9299111 13.3047284 -0.5315731 11.0316277 -1.5315731 8.0849800 1.7903550 9.2925945 7.5264233 12.18852598 8.98905014 8.23496014 10.66349593 9.60028834 11.72714463 5.91964280 9.49909844 9.08491599 10.43817764 13.61324893 11.21871967 8.04207849 8.12664305 0.05338942 6.89888431 10.29020539 11.407092 4.735593 8.363249 8.935018 5.326412 10.353872 7.803822 6.154931 10.253066 10.669943 NA 8.848892 9.511397 11.532332 10.249791 5.927863 9.479659 7.550581 9.354890 10.377758 8.905143 10.162354 10.559867 10.464552 11.956899 10.526085 7.974243 NA 9.742594 9.517599 10.142624 7.387294 11.362870 8.051514 7.646025 12.755639 10.013396 9.700253 12.131545 11.636163 9.347249 5.007590 TCGA-A8-A06N 66 0 NA 0 breast stage iiib t4b n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 3 1 1 NA 2 5 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7.282743e-07 2.080784e-07 10.7186842 10.1515854 11.6505031 9.6674967 9.1931811 7.3067863 10.8065168 8.6412053 8.2117243 14.1701287 6.1051521 10.5392246 1.5767640 13.4264793 4.0857900 5.1982623 6.1147376 9.1260398 8.8735133 14.1952296 1.4613190 15.0439872 -2.1234339 9.1713450 11.6426556 6.8678557 -1.1237483 7.8363357 8.2524592 -0.1235911 9.1663527 6.7123839 NA 3.1617426 9.8664377 9.9991618 9.5129585 10.6078649 9.9753528 11.8148107 1.8763303 10.8314388 13.9975030 8.2198969 12.3617845 11.2931313 12.2061302 4.1431240 -2.1234339 9.2133981 9.3403689 NA 9.7004969 11.4810029 3.6042493 2.3357691 9.6383005 11.8269808 10.4133094 7.0184406 13.0073869 7.6576936 10.6977092 10.7795265 11.3402413 11.6479264 6.0906523 11.5447756 13.1004862 NA 10.2352596 10.5329822 3.4621963 4.2338881 9.5165788 9.3661819 11.1778300 11.7380023 0.1982427 1.6836965 9.9241394 8.7076411 10.5593284 9.4631737 0.4709800 0.5004700 0.5089800 -0.0169790 -0.0583270 0.4978700 0.4949300 -0.0633010 -0.0997410 1.0134000 0.8882200 2.3893000 -0.5953600 -0.5893100 0.3388000 0.5470000 -0.6236100 0.4779500 0.4779500 -0.6332000 0.0253900 -0.0202750 -0.0705360 1.0321000 1.0321000 -0.0027707 -0.0027707 -0.0027707 0.8726900 0.0162860 0.4709800 -0.0212350 -0.5680300 0.4978700 0.4838900 0.4949300 0.4776700 -0.0633010 -0.0997410 -0.6500600 0.4476500 -0.0407520 -1.2165000 -0.0381700 -0.0381700 -0.0381700 0.0157270 -0.5893100 -0.5893100 0.4655300 -0.6200700 -0.6180600 -0.6180600 0.4779500 0.4779500 0.4779500 -0.6332000 0.0253900 -0.0202750 -0.5840200 -0.5917500 1.0321000 0.2526100 -0.0027707 -0.0027707 0.8726900 -0.0468540 -0.5747600 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 0.000 1.032 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.000 0.000 -1.217 1.085 0.000 0.000 0.000 0.000 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 0.000 1.032 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.000 0.000 -1.217 1.085 0.000 0.000 0.000 0.000 6.3998957 8.7155375 3.4309275 6.4077147 4.9165674 10.8487752 -2.1234339 -2.1234339 8.5255901 8.4537628 NA 5.7418202 NA 9.9508099 9.2338859 2.6836965 2.1982741 9.5061457 6.1003364 10.5916524 9.6990161 8.3801597 9.7681175 1.9638070 10.4748516 9.3424103 -0.5386810 -2.1234339 10.6042543 3.3998957 11.4365472 11.5273855 8.3357655 10.2912833 11.2796122 9.1965702 5.4309242 -0.5386810 -2.1234339 4.5056877 9.4655168 8.1778301 10.5336522 -2.1234339 3.5916794 7.3439390 10.1375472 8.2782799 10.1177211 NA 9.4261184 2.7343086 3.3998957 9.3762893 5.4983849 0.1982427 8.1123478 6.8791482 5.4612961 NA 13.5597397 -0.5386810 10.3319179 -1.1237483 6.9343254 2.8305393 9.3875924 8.0209922 13.578205 4.446190 8.784726 13.426479 9.640376 9.773423 14.195230 13.664007 8.850748 11.348517 12.658974 9.672373 9.213398 8.185810 1.046282 7.772666 11.886774 10.5036397 7.9111325 8.9186772 10.0453193 9.1937464 9.9904632 4.7466997 2.3999093 6.1051521 5.3275437 0.1982427 4.8875594 8.3490246 6.8593273 8.9618062 9.7056602 9.1784014 13.4468122 2.3357691 12.8544047 9.5129585 11.0015858 9.5398920 12.3201839 6.8217778 10.6861019 9.1605796 NA 8.4705649 2.0462466 9.7004969 -2.1234339 10.5965781 9.6383005 8.1195196 13.4058559 10.3153855 9.9070009 12.4002020 8.7513151 10.5974330 -0.5386810 TCGA-A8-A06O 60 0 NA 396 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma NA NA NA 3 3 1 NA NA NA 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 0 0 0 0 0 0 1.387189e-06 2.427581e-07 10.7092333 10.4870362 11.7993646 9.1463637 9.3748015 8.7264137 10.6148149 9.3252040 9.9396798 13.4411664 11.0005497 10.6047722 0.4432884 13.0482839 4.3259692 9.7165381 4.4206037 8.4656933 10.1489577 12.9007062 3.4877179 12.5859111 1.2506585 9.2217394 12.2558035 6.5307887 1.0282862 9.7820617 11.1539166 3.1982112 8.7077681 6.4986083 0.7652801 4.1157491 9.7413879 10.1236848 9.5771099 10.9299090 9.8069125 11.4986078 3.0282862 11.3080919 15.0801482 8.1957561 9.7703165 11.6118408 10.9962346 5.2377396 6.1086604 8.9959943 12.3597647 -0.5566055 9.9175383 5.0726804 5.7379463 5.6232348 9.9703136 11.7752220 10.3202260 11.6370047 12.7909467 7.7054202 11.2698738 10.2439098 10.5758251 11.3127264 5.5094140 12.5696265 11.9492609 -0.5566055 10.2514851 10.7851221 3.8732718 5.3259692 10.4341384 10.0589550 10.7382332 11.8869165 3.3013096 5.8945365 12.8069126 10.8210781 10.2340810 8.5026699 -0.182950 0.949520 1.207400 0.227620 0.211920 0.113890 0.219450 1.563300 -0.286940 -0.597010 1.685100 3.656900 0.221450 0.221450 -0.605840 3.656900 -0.599440 -0.072675 -0.072675 -0.612010 0.235810 0.233950 -0.611620 0.584710 0.584710 0.021323 0.753950 0.753950 0.225150 -0.182950 -0.182950 -0.079343 0.214530 0.069525 0.107870 0.219450 0.219450 -1.043100 -0.286940 -0.208340 -0.199740 -0.174110 -0.618150 -0.610850 -0.610850 -0.593800 -0.611530 0.237210 0.237210 -0.599640 -0.605840 -0.599440 -0.599440 -0.072675 -0.072675 -0.072675 -0.612010 1.075700 0.233950 -0.590190 -0.611620 0.584710 0.014888 0.021323 0.753950 0.216800 0.172720 1.018400 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 0.000 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 0.000 8.33054585 12.30605955 3.61324874 9.36887986 4.17124687 9.75620837 2.25068877 -0.55660553 8.37406267 7.18479205 NA 7.48498477 3.83564117 10.02405506 9.51008726 3.61324874 8.41486871 9.37627823 9.95211046 11.50114791 9.53250438 8.54004045 10.06171086 2.25068877 9.40622138 9.95606580 3.76524830 NA 11.05088685 2.69124381 12.12060453 12.26828408 7.78983878 9.70952621 8.99214726 10.27502847 8.12280522 0.02828624 -0.55660553 2.53079491 9.27858629 9.03391244 10.47537109 4.74710807 8.27361892 7.81401265 10.19695996 6.35621425 9.82810903 NA 11.46950293 0.44328837 4.53078866 9.19363032 6.62700997 5.61325169 8.78094717 8.73334417 8.41343118 2.61324874 13.44156318 -0.55660553 10.32175947 NA 7.11575116 4.67214243 7.84846708 8.41343118 14.106534 6.546614 8.704245 13.048284 9.273841 11.446316 12.900706 12.557230 8.444734 10.784844 13.092469 11.970436 8.995994 9.655822 3.530782 7.839930 11.894150 10.586709 7.949137 8.751664 8.916016 10.289991 9.762981 6.288816 8.512104 11.000550 6.191517 2.613249 2.966892 8.239446 10.732480 9.882117 10.469354 8.409110 12.336532 7.191518 12.637617 9.577110 10.768912 9.352468 11.125442 9.332829 10.431655 8.462916 7.484985 8.696771 6.737946 9.917538 5.974706 9.977142 9.970314 7.844205 13.494449 10.286069 9.575182 12.753512 10.245034 9.491131 2.613249 TCGA-A8-A06P 63 0 NA 396 breast stage iiia t1c n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 5 2 NA 2 4 1 1 3 5 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 6 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.387189e-07 9.9681661 9.8193856 11.8189897 9.9398065 8.5071869 8.5824969 10.2814053 9.1159745 9.7233886 13.5835461 10.6943343 10.5793845 1.8620347 12.7154001 2.2099524 10.3827276 6.6505161 8.4524365 9.1773752 12.1065997 3.6879901 13.3151032 6.5674953 9.9393209 10.7418813 5.5421404 -0.5974961 9.2235647 9.3184673 2.6505118 8.1855861 7.0607997 1.4026130 5.4025892 9.7727304 9.7825078 9.7000774 11.8682819 9.8609946 11.2022744 8.8045341 11.4120668 15.3617183 8.3493918 9.7819663 11.7468839 10.8576583 3.9571810 3.7601358 9.2798722 11.0108428 NA 10.9823753 6.7245166 6.3214519 5.0319465 10.1330582 11.4139900 10.5267093 12.1516194 12.9121775 8.1790208 10.9764718 10.3761061 11.0328551 11.4722056 4.8288550 11.1392013 10.4524366 0.7244757 10.6311061 9.4727089 3.7993671 6.1507810 11.2683213 10.2605690 10.7368613 10.4524366 4.9261513 8.3348029 13.0045329 12.0799773 9.9748145 9.7109271 0.0158660 0.0158660 0.0158660 -0.0111980 -0.0518960 -0.0139530 0.0813220 0.0112610 -0.0564980 1.2687000 1.2687000 1.2707000 -0.0012473 -0.0627640 0.0080567 0.0080567 0.0080567 0.0049969 0.0049969 -0.0092666 -0.0940640 0.0311550 0.0589370 0.0589370 0.0589370 -0.0242510 -0.0242510 -0.0242510 0.0813220 0.0158660 0.0158660 -0.0085510 -0.0111980 -0.0139530 -0.0139530 0.0813220 0.0813220 0.0112610 -0.0564980 -0.0564980 -0.0100940 -0.0100940 -0.6881500 0.0158660 0.0158660 0.0158660 0.0158660 -0.0627640 -0.0627640 0.0080567 0.0080567 0.0080567 0.0080567 0.0049969 0.0049969 0.0049969 -0.0092666 -0.0940640 0.0170130 -0.6550100 0.0589370 0.0589370 0.0143300 -0.0242510 -0.0242510 -0.0047133 -0.1253800 -0.6364200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.583 0.000 0.000 0.000 0.000 9.01361272 13.97101921 8.94851792 9.98848943 4.13051085 10.22356470 1.20995237 -1.59727782 8.28675873 7.72226040 NA 8.01355773 4.01729839 10.46057978 9.20833192 -0.01246084 9.17572718 8.51893203 10.32368508 10.37161473 9.45789753 7.85173655 11.33110639 2.92615127 9.44287779 9.64754639 4.61203986 NA 10.88942304 2.86201490 13.18947020 12.20550822 7.45787004 10.12582233 7.65997592 9.50390721 1.86203474 -0.01246084 -0.59749610 5.88640382 8.74910180 9.91680892 8.83512983 5.47940520 7.78873073 6.87426336 10.75269842 7.17737469 9.61325943 -1.59727782 10.23468680 1.40261304 4.70637031 9.16943150 6.44402760 5.15747629 9.70465569 9.35314396 7.56245919 -0.59749610 13.72462177 -0.01246084 10.18394770 NA 8.72451624 5.44698070 7.51893164 9.27295281 13.4851758 5.4686778 8.3229408 12.7154001 10.6086866 10.2243619 12.1065997 12.3673801 9.0346744 11.0066779 12.3713448 9.9034298 9.2798722 8.7991929 -0.5974961 7.1904904 12.1227254 11.1562227 6.5006204 9.2690942 9.2644503 7.7177374 10.6189489 6.4632840 8.8257039 10.6943343 6.5058751 0.9875392 4.9417449 6.1309165 11.7893936 10.3823705 9.2225515 8.9866109 12.4262557 6.3392265 12.1510052 9.7000774 10.6490318 9.9523727 12.1478422 10.6208486 10.7163213 9.9729181 NA 9.6070736 6.6314070 10.9823753 8.6587967 10.5354090 10.1330582 7.2667744 13.7959785 10.4148633 9.9927071 12.8323216 10.0714730 10.1790211 0.9875392 TCGA-A8-A06Q 63 0 NA 31 breast stage iiia t3 n2 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 6 3 1 NA NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 5.028561e-06 1.387189e-06 10.2583956 10.1404280 11.8884111 10.1439459 8.9622020 9.4095547 11.1358418 9.6897312 6.6242442 13.5567637 10.3725491 10.3268518 0.1403860 12.5885442 7.1460523 6.4118906 4.1404269 7.9827780 9.3626191 12.7172075 0.7253485 12.3884296 8.2515638 8.8354735 11.4004653 7.4001716 -1.8593522 9.9082649 11.5668238 2.7253922 7.9003162 7.7007608 NA 2.6639821 10.0596638 10.5818160 10.3299436 11.9576115 10.5279068 12.3311786 12.0556538 11.6918959 14.1514586 9.6623472 10.1631426 11.3112919 11.6026746 2.5327409 5.0711663 8.9550105 12.4764463 -1.8593522 10.4584058 2.6639821 4.8818946 5.6795871 10.9758863 12.1581933 10.8884111 11.4152429 12.6493988 7.9119174 10.8121901 10.1581550 10.5559057 11.3043921 5.8953147 12.3162893 10.8503733 -1.8593522 9.8413011 10.0077067 3.0497179 4.7697823 10.9473803 10.2825350 10.8291153 11.2928712 1.1404515 9.0061611 11.8056528 11.5854428 10.5750562 8.2278907 -0.0063668 0.4056100 0.9045200 3.1128000 0.4868200 0.4978700 0.4226500 0.0984150 -0.5203000 0.4854400 1.3323000 0.4727200 0.3996100 -0.0116110 -0.0797420 0.8554100 0.3603500 -0.0400730 3.6569000 0.0000000 -0.5117700 0.4502000 0.4204900 -0.5916600 -0.5511600 0.3239800 -0.1123400 -0.1123400 3.6569000 -0.0477320 -0.0063668 -0.4453400 -0.5256300 0.4935500 -0.5193800 0.3874900 0.2687800 0.0984150 -0.5178400 0.4888900 -0.5159900 0.4706800 -1.2929000 0.9735800 -0.5223500 -0.5212500 -0.5423500 0.0041632 -0.5173300 -0.0797420 -0.1154800 -0.0096806 -1.0776000 -0.0400730 3.4125000 -0.0536110 0.0000000 -0.5487500 0.4347900 -0.4777600 0.4204900 -0.5916600 -0.0642400 -0.1295300 -0.1123400 -0.5707100 -0.0142280 -0.1526300 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 -0.445 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 0.000 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 -0.445 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 0.000 6.8199083 9.1219953 1.7253922 8.1627956 3.9332799 10.2476450 -0.8596140 NA 8.8278038 3.3883549 -1.8593522 5.2285263 0.9477784 10.5595981 8.9669763 0.1403860 6.6950167 10.7433587 10.4606644 11.0559339 10.5550498 8.2424034 9.1697151 0.4623665 9.0659823 8.7188007 6.4623567 NA 9.5967824 2.5998652 13.5470980 12.8810520 5.3002995 9.6467355 7.3740475 9.5962688 8.2838111 -0.8596140 NA 4.1177117 8.7542174 9.6600642 10.4609465 3.0946246 9.1748623 7.2876330 10.5588076 6.9315909 9.8155029 -0.8596140 9.8088698 -0.2745642 3.5327409 10.2820434 7.0834410 2.7253922 6.9606067 8.0138720 7.9234261 -0.8596140 14.1049493 -0.2745642 10.0157933 NA 6.9669760 2.7842946 7.9036403 9.4171339 12.6960794 6.9637955 9.4891561 12.5885442 10.3679958 11.5958836 12.7172075 13.0541121 9.9576635 10.5381026 12.5548489 9.6337830 8.9550105 9.6447504 0.7253485 6.9119168 12.1925714 10.4287172 7.9542091 9.0015149 8.9843490 9.2071898 9.0431949 4.6322799 8.4453497 10.3725491 6.5957558 -0.8596140 3.4258352 8.1300495 7.1875520 9.3234430 8.4407803 8.3954566 11.4017884 4.2697139 12.7341949 10.3299436 10.5487577 10.3898377 11.1196745 7.8818952 10.4203287 9.4107233 4.4979827 9.9722854 4.4442099 10.4584058 -0.8596140 9.3529242 10.9758863 7.8004418 14.3857392 10.7498376 9.4724644 11.4651710 10.2068536 9.7486828 -0.2745642 TCGA-A8-A06R 69 0 NA 547 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 6 3 1 NA 1 5 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 10.6262153 9.6847264 10.8056033 8.8195200 9.2614286 9.3535818 9.4939807 10.3702238 9.9464930 13.4215018 10.0211539 10.5758603 1.3391374 11.2711664 4.0863932 8.9486052 4.6192721 11.0614822 11.6334551 12.4589375 0.1167640 12.2622778 3.4386921 9.8463910 10.9326871 5.7017320 NA 10.4867310 10.1428326 1.9912452 8.7714063 7.9994132 NA 6.5597136 9.7903737 10.7007932 9.3670687 9.9459643 9.9454356 10.7200875 6.5033519 10.6066181 14.8828677 8.0300187 8.7761714 10.7145124 10.3975409 3.8172139 6.2933594 8.5938538 10.1783664 1.1167640 11.1134791 6.5148008 6.5486154 5.7216324 10.4266255 12.0985753 10.4002445 11.5376077 12.7502953 7.3455889 10.6513973 10.0034829 11.3648954 10.4133041 4.9241236 12.3382566 8.8937514 NA 10.3956069 9.0336449 0.5317682 5.6610911 8.8056033 9.5624748 10.7284098 9.9433188 4.8716564 6.7509762 12.4806312 10.5741511 9.1130084 9.2631267 -0.24606000 -0.17208000 -0.06231900 2.25780000 0.57661000 -0.36533000 -0.55887000 3.65690000 -0.21057000 1.00840000 0.09159000 1.63460000 0.32302000 0.43772000 -0.02616700 1.09360000 0.00069327 3.65690000 0.45496000 -0.77711000 1.65940000 3.24340000 -0.42287000 -0.49282000 0.77195000 0.64928000 -0.79536000 1.01590000 2.24450000 -0.43138000 0.22022000 0.32675000 0.16415000 0.60467000 -1.15150000 -0.21837000 0.13273000 -0.00733390 -0.14361000 -0.32065000 0.18787000 0.10468000 -1.18520000 -0.44627000 -0.44627000 -0.42996000 0.28850000 -0.17610000 0.41898000 -0.63309000 0.06365200 0.00069327 -0.01958900 -1.16580000 0.45496000 0.45496000 -0.26336000 -0.09221300 -0.12681000 -0.08837400 -0.42287000 -0.46908000 -0.28204000 -0.53167000 -0.49527000 -0.13432000 -0.34126000 -0.45726000 -0.111 -0.111 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.449 -0.449 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 0.000 0.000 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 0.000 -0.111 -0.111 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.449 -0.449 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 0.000 0.000 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 0.000 8.9902143 13.9729039 5.7412620 9.4461929 NA 10.6665549 NA NA 8.9079332 8.8137376 NA 8.8783213 NA 11.1857723 9.8866081 3.7412620 5.9326872 9.3827760 8.3631150 11.1402935 9.6371597 6.8716576 11.8244170 NA 7.1864441 9.5360282 2.9241189 0.5317682 11.0105773 -0.4681320 12.9366832 12.1246151 8.2077645 9.7491596 9.5714123 9.8942995 3.1756683 0.8537562 NA 4.9912406 7.6005857 10.3123475 9.4588448 2.3391659 8.7740767 6.8446907 10.1638942 6.7461273 9.4258675 NA 8.8660811 3.1167640 3.8172139 9.3975409 6.8316113 8.4129216 9.0386112 8.3551749 10.0538987 1.9912452 13.6345626 0.1167640 10.4805399 NA 6.7702119 3.4860064 8.1409867 7.7142022 12.812793 4.531806 8.696715 11.271166 9.452503 10.740347 12.458938 12.891351 8.903584 10.501194 12.444884 8.266517 8.593854 6.978891 4.554177 7.286695 12.055492 11.090946 5.932687 8.893751 9.103560 7.628707 10.643925 6.438699 9.774982 10.021154 6.023661 6.559714 7.921977 7.640828 10.891008 9.843556 7.345589 8.974751 8.866081 9.054389 12.357898 9.367069 10.401016 9.186444 10.546177 9.747341 10.386287 8.475788 NA 9.044894 8.676466 11.113479 8.157517 10.615952 10.426625 7.342380 14.133346 10.162985 10.149275 11.556774 10.898949 9.536028 3.817214 TCGA-A8-A06T 74 0 NA 1614 breast stage iiia t3 n1a m0 female 2007 NA no infiltrating ductal carcinoma NA NA NA 5 1 1 NA NA NA 1 1 4 5 NA NA 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 11.59921810 10.39164927 11.86289391 7.52964841 9.21006346 8.94442481 10.71890134 9.32923843 8.49162465 13.19752870 10.49055399 10.44816670 0.41694780 13.51741317 4.72437742 9.75501574 4.98983838 8.18909759 6.32383840 13.34034970 3.64960396 13.93488792 2.95300443 9.97308989 11.37012586 5.13941219 0.09504672 8.74965594 10.97402862 0.09504672 7.90237451 7.01388317 NA 3.82294424 10.32534054 9.72346539 11.76135480 10.60553674 10.32173309 11.94050987 4.32383840 12.23000758 13.95746348 7.81223379 10.42649666 12.79686774 11.36837834 4.28484723 2.48733199 9.19107600 10.66748326 -1.90508835 11.39580139 4.96538258 6.14486826 4.45256908 8.86568379 11.43459153 10.45586690 10.33402160 12.36794117 8.25110269 11.01853306 10.84916408 10.68232854 10.80668680 5.01388205 11.55483564 11.24429063 NA 10.06764073 9.34176053 3.48870780 4.20354573 10.64480454 8.85989130 10.31721101 10.93146471 -0.90508835 8.89915085 11.22446384 10.05248464 10.49082170 9.52285651 -0.3611300 0.0967980 0.1110800 0.0000000 0.0000000 -0.3415900 -0.3451500 0.0290440 -0.8069100 -0.1638300 -0.6846000 0.5374900 0.0387710 0.0387710 -0.3304000 -0.3304000 -0.3304000 -0.7903400 0.1243200 -1.2098000 0.0339720 0.0423070 0.0256710 0.0256710 0.0256710 -0.3902900 -0.3902900 -0.3902900 0.0488300 -0.3611300 -0.3611300 -0.7519300 0.0000000 -0.3415900 -0.3415900 0.0689520 0.0689520 0.0290440 0.0833420 -0.8033900 0.0408920 0.0391950 -1.2105000 0.0836060 0.0836060 -0.7782100 -0.7840600 0.0387710 0.0387710 0.0660860 -0.3304000 -0.7830200 -0.3248400 -0.7903400 0.1243200 0.1243200 -1.1784000 -0.7860600 0.0423070 -0.7980300 0.0256710 0.0256710 0.0441480 -0.3902900 -0.3902900 0.0488300 0.0070826 -0.7936900 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 0.000 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 0.000 0.000 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 -0.268 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 0.000 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 0.000 0.000 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 -0.268 8.2371268 12.0037877 1.7954761 8.8615488 5.7495852 10.6070195 2.6799867 -1.9050884 8.7771366 8.3153982 NA 6.9429226 3.2649417 9.8971322 9.1711673 2.0950130 7.5379631 9.3635618 5.1284419 10.8191073 9.7307018 7.5888750 9.8808809 1.9023824 9.1187742 9.2636920 2.3429529 0.9023438 10.4851888 2.9023824 12.1992090 11.6958620 7.5605866 10.5851186 9.6161294 9.2210791 0.9023438 1.2649567 -0.3199458 3.8499092 9.6827973 9.3459104 11.8508463 3.0950130 8.1598839 7.7727395 10.8853683 6.6224970 10.2012556 -1.9050884 13.0749362 3.2243027 4.3044745 9.8002159 6.9118749 5.1173875 8.1557158 8.0433872 8.8967281 0.4169478 13.6815371 -0.9050884 10.4784542 1.6799642 5.9653849 5.2548926 8.5452000 8.9247424 13.3717985 5.7023500 9.1950252 13.5174132 9.0250991 11.2891611 13.3403497 13.8071706 9.1864552 10.5014906 13.2809793 9.7603557 9.1910760 8.8524100 0.6799642 7.9389409 10.9590125 10.154702 8.350049 9.538999 9.322034 9.223659 9.403683 6.452572 6.430411 10.490554 5.352409 NA 5.234570 7.548249 9.547261 9.907197 9.543007 8.696791 12.981812 6.554451 11.998093 11.761355 9.931859 9.933042 11.821664 9.119467 9.994377 8.470059 2.487332 8.494565 6.066563 11.395801 6.645766 9.983763 8.865684 7.558544 12.871965 10.556755 9.990974 12.395301 9.565170 9.045576 3.182486 TCGA-A8-A06U 80 1 883 NA breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 3 1 NA 1 5 2 1 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 9.4760866 10.1777985 11.0743819 9.7823286 9.6142344 8.4058545 10.3105377 9.2905154 9.2851289 14.0219482 11.2044380 10.5983964 -0.3623434 13.6164255 2.0971051 8.5684076 3.9595940 9.1729457 10.1666128 12.9784941 NA 14.3118351 5.0806150 9.5539157 11.4470366 6.2815258 0.2226809 10.1739176 11.7204847 -0.3623434 8.2018201 7.3065557 NA 4.0639343 9.9097169 10.0597352 10.2860279 9.5632249 9.9996142 10.3933925 0.2226809 10.7458681 14.1761019 7.2056261 9.7138180 11.0329368 11.6245790 4.4450248 3.2815202 10.3346379 10.3096537 NA 10.6267100 5.4190298 5.9322904 5.4831612 9.9311420 12.2128551 10.1444738 11.3634627 12.7347972 8.1395074 9.2615520 8.9267787 11.4064750 10.8434636 6.1999138 11.1874551 9.9924708 -0.3623434 10.8262592 8.8459046 3.0334230 4.8274939 8.4108096 9.1234996 10.6956621 10.1782828 2.0971051 5.1768294 11.7674364 10.2801734 9.7257960 8.7238067 -0.74398000 0.15811000 0.37331000 -0.80368000 1.98730000 0.43868000 0.11204000 -0.02955300 0.31081000 0.65443000 0.07024300 0.84376000 0.27080000 -0.35795000 -0.02233200 1.97260000 0.00000000 0.02964100 0.48113000 -0.75262000 0.07829400 -0.34927000 -0.39297000 1.47740000 0.60666000 -0.15023000 -0.08479300 -0.08479300 1.31060000 -0.37403000 -0.74398000 -0.10473000 -0.78707000 0.02272500 0.04315700 -0.06088300 -0.02753500 -0.01849000 0.01147600 0.33150000 -0.84499000 -0.75780000 -0.75633000 -1.08740000 -1.29290000 0.00093255 -0.06645100 -0.35795000 -0.41887000 -0.82725000 -0.06437400 -0.26143000 -1.19400000 0.02964100 0.03232400 0.42486000 -0.75262000 -0.40318000 0.05836700 -0.38739000 -0.39297000 0.06680200 -1.18050000 -0.15528000 -0.08479300 1.10610000 -1.19460000 -0.40405000 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.744 -0.407 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 -0.354 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.744 -0.407 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 -0.354 8.4008829 12.6965077 8.6956623 9.3250461 2.3688521 10.6844534 -0.3623434 0.2226809 8.1748887 7.9908170 1.2226191 7.6550913 4.0639343 11.3787160 9.2235719 3.8855939 6.8664889 9.9397380 11.0940248 10.6352027 9.2945867 7.9595986 10.1454650 0.6376566 7.6263552 9.4618336 1.4450380 0.9596218 10.3043382 1.8076022 12.4242463 12.2262679 7.3311570 9.8778654 9.5542963 9.8330427 4.1612347 1.4450380 0.6376566 -0.3623434 9.1414961 9.9764067 10.2169864 3.2226346 9.3415826 8.2905152 10.1690519 5.1454655 10.0971021 -0.3623434 11.4751012 1.6376566 3.8471250 8.9077788 5.7888397 5.8950578 8.7343855 8.4141034 7.5172536 2.0971051 13.8123230 NA 11.0473265 NA 8.9764069 4.0971051 9.2851289 9.1315260 14.0549556 6.0470606 8.4434144 13.6164255 9.3415740 10.8832231 12.9784941 13.0250819 8.9734626 11.0202944 12.7178217 10.4749040 10.3346379 9.0083577 0.2226809 8.6404854 11.3189088 11.1634359 6.0888815 8.4768742 8.8688917 9.0018051 10.0748242 6.3992224 7.6572613 11.2044380 6.2958828 -1.3621579 6.0806129 8.0839680 10.0078129 10.0602608 9.3398431 8.4353319 12.6921899 6.5801847 12.6275119 10.2860279 10.4784483 10.2231025 11.9934344 8.5918668 10.5210773 9.6299006 9.0449380 9.2685563 6.8422410 10.6267100 6.0888815 10.5680381 9.9311420 8.1999128 12.7008969 10.6915963 10.4108096 12.8597860 10.1305250 9.4578493 0.9596218 TCGA-A8-A06X 77 1 943 NA breast stage iib t3 n0 m0 female 2006 NA yes infiltrating ductal carcinoma NA NA NA 3 1 4 NA 1 5 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.196247e-06 1.560588e-06 10.1964461 9.3732769 11.7314876 9.2515724 8.5737354 9.6099558 10.0728019 9.8353585 10.0466130 13.8082861 10.7854748 10.5186184 2.6910874 12.9643502 1.9906645 8.8809172 4.4825063 7.8044337 9.8337887 12.4689169 5.3656925 14.6157623 NA 7.9272909 10.2800954 4.8486330 -1.0092629 9.7338043 11.2612402 1.3126071 7.1199361 6.5220338 NA 3.2385729 10.0560689 9.8937814 8.4377363 9.7321198 9.9390201 10.2800954 NA 13.0168304 14.5208458 7.9568408 10.1237950 11.0050221 10.2621159 3.7455385 7.4704327 9.7430335 10.1693177 -1.0092629 11.4772365 5.2760537 5.4825063 6.3035360 9.9162073 11.8449369 9.8267032 10.6195540 12.8798716 8.5961323 11.1014624 10.2526361 11.3989826 11.0916436 4.2760574 11.8024289 10.1915514 NA 10.4021638 8.6771534 3.0975097 5.0991774 9.9206509 11.4392854 9.8322172 9.6648451 0.5756028 6.4335971 11.7816122 10.6122469 10.2915773 9.4315220 -0.0077672 0.6311400 -0.0372370 0.4461000 -0.0012663 1.4814000 0.4371400 0.4464400 0.4469500 -0.4349700 0.0073418 0.9281400 1.0567000 0.4527300 0.0144500 0.0144500 0.0126900 -0.0065240 -0.0132830 -0.9349800 3.6569000 0.4432200 -0.4511600 -0.4402800 1.7763000 0.6267600 0.4417000 -0.0460600 0.0049722 -0.0077672 -0.0077672 -0.4720600 -0.4474000 -0.4515900 -0.4617500 -0.4527700 -0.4406100 0.4379800 0.4469500 0.4224800 0.4685000 0.0227050 -0.9396200 -0.4559900 -1.2929000 -0.4303000 -0.4314200 0.4527300 -0.4168600 -0.5858000 0.0144500 -0.4260500 -0.4387700 -0.0065240 0.0483840 0.0173850 -0.4412500 -0.4476200 -0.4375800 -0.5478500 -0.8804800 -0.4570600 -0.4447100 -0.4889100 -0.0460600 -0.4416900 0.3947700 -0.4303000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.448 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.871 0.000 0.000 0.000 0.000 -0.409 0.000 0.000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.448 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.871 0.000 0.000 0.000 0.000 -0.409 0.000 0.000 7.666609617 12.933442219 4.382971528 8.474468492 0.575602777 10.959679535 1.312607093 -0.009408127 8.007461272 7.312580774 NA 8.988044136 6.190324475 11.221273778 9.486507840 1.798009028 6.088684372 9.008852964 6.829857169 9.681523760 9.474166283 6.663078431 10.332727511 1.575602777 7.478492984 9.088684901 0.575602777 NA 9.738845677 0.575602777 12.297426565 12.315817730 7.433596290 10.381359196 10.653321163 9.584043993 3.848637962 2.160565278 NA -1.009262921 9.662193926 9.513234311 6.013020004 1.575602777 8.950857672 9.236205582 10.684575329 6.285272740 10.682396320 NA 11.509797614 2.691087441 4.276057388 9.642206788 5.589374003 3.382971528 9.191551547 8.433596290 6.490497930 2.450089496 13.855322630 -1.009262921 10.562879378 NA 9.332727399 5.013020004 8.668372329 8.902044930 13.168360 7.195224 9.074132 12.964350 10.991709 10.559559 12.468917 12.055227 9.096561 10.758837 12.953549 11.099177 9.743034 7.474468 NA 8.592424 13.354582 10.3035358 5.9793372 9.2967146 9.1250792 8.3495895 9.8808259 5.8108312 6.5528950 10.7854748 5.9793372 1.9906645 4.6053639 8.2949814 10.2362056 9.8877420 7.4211055 8.4418640 9.1718050 6.1404003 11.0785598 8.4377363 10.2445004 9.8290689 12.8291674 9.5365825 10.0157923 9.8274921 1.7980090 9.7079523 4.9906509 11.4772365 6.8610174 10.3293893 9.9162073 7.7785555 13.4793089 10.9693633 9.8664022 11.5305386 10.4875066 9.0647942 0.5756028 TCGA-A8-A06Y 66 0 NA 791 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 5 1 3 NA 1 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 9.4577469 10.0889733 11.0429926 9.0455388 8.8651174 9.4946550 9.5915381 9.8886279 9.8116056 14.6339597 10.7823913 10.6761283 2.5354807 13.1600155 3.3719770 8.3280389 7.8022675 8.4040831 11.6357679 13.0242537 1.3130717 14.3911283 6.1118305 9.6671618 11.0062852 6.6046437 -0.2719489 6.9326978 10.9008662 2.0500489 6.8208835 6.5610160 NA 4.0135248 9.2369114 10.3773823 10.3974542 10.2817555 9.9228830 11.2655873 1.5355056 11.9409265 13.8155890 7.5774689 8.9569450 11.4443026 11.2349296 4.1543888 6.7834082 9.0713119 11.6094314 -0.2719489 10.4679068 2.3131007 3.5861042 4.1543888 9.9689174 11.4473011 10.4255281 11.4417275 12.6481068 9.2269754 9.9689174 9.9134661 11.1077753 9.9271851 4.2516888 11.9078798 11.2563361 1.0500489 9.9837449 9.0612815 3.3136957 2.5354807 11.3674669 10.4560466 10.2413603 9.9742729 1.8980535 7.2199797 12.3716442 9.2038596 10.2841532 8.9351406 0.450200 1.620800 1.643500 0.098997 0.098997 -0.282510 0.107890 -0.255640 -0.255640 0.391810 0.391810 0.376440 -0.050100 -0.050100 0.000000 0.000000 0.000000 0.117410 0.088982 -0.281560 0.091300 -0.854160 0.096670 0.096670 0.096670 0.078727 0.078727 0.078727 0.616970 -0.858920 -0.865540 -0.360090 0.098997 -0.282510 -0.290200 0.091925 0.086984 -0.255640 -0.255640 -0.258660 0.105700 0.105700 0.391810 0.077142 -1.292900 -0.868390 0.094201 -0.050100 -0.050100 0.000000 0.000000 0.000000 0.000000 0.117410 0.088982 0.118290 -0.281560 0.091300 -0.854160 0.359530 0.096670 0.096670 -0.869470 0.078727 0.078727 0.616970 0.104970 -0.875000 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 -0.866 0.778 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 -0.866 0.778 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 -0.107 5.7168099 12.5523888 2.7281164 9.6107693 3.2180527 10.8323973 NA -1.2719489 8.9533336 8.0455385 1.7281382 7.4695930 2.0500489 10.0545556 9.1554391 -0.2719489 3.8155857 9.7649867 4.8778718 10.0347576 9.4219878 7.5954052 10.7755909 0.3131297 10.7298862 8.8274739 2.8980535 2.1875461 10.3561160 1.0500489 12.7263640 11.7834086 7.3168408 10.2677696 8.7504940 9.4076062 2.1875461 1.0500489 NA 2.1875461 9.8791427 9.8122702 9.6654999 1.3130717 9.9291718 7.4492254 10.3298970 4.7942131 10.1512421 NA 13.4433911 NA 5.4963089 10.0785184 6.7303791 NA 9.5845516 6.8155895 3.8574138 2.3131007 13.9336140 NA 11.1630150 0.7281382 8.2516883 5.9375798 8.3683711 10.1783064 13.051844 6.522542 8.890518 13.160015 10.475060 11.821048 13.024254 12.133534 8.948504 11.087327 13.770341 11.618010 9.071312 9.225978 -1.271949 6.903052 11.788991 10.7025408 7.4763193 8.3017733 8.6632912 7.8261582 10.1285414 2.8980535 7.4560463 10.7823913 4.6107709 -1.2719489 6.8676778 7.2651893 10.9984215 10.5241658 9.1834533 7.8340349 13.9793497 2.3131007 11.5990726 10.3974542 10.6484790 10.1026223 11.4047445 9.6888521 10.7459785 9.1139885 NA 9.0359417 0.3131297 10.4679068 4.4005516 10.4969308 9.9689174 6.9855141 13.5107661 9.4813429 10.6570146 12.6899376 9.9098995 10.3805231 -0.2719489 TCGA-A8-A06Z 84 0 NA 31 breast stage iib t3 n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 3 1 1 NA 3 5 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.31783e-06 4.508365e-07 11.05805980 10.41074993 12.19303678 8.90923367 9.16744600 8.79786770 10.86817898 9.35100590 8.96806655 14.20672738 11.40658285 10.48962823 1.47840238 13.38300140 3.37652655 9.89048956 5.48657602 7.65196439 9.94674738 13.25718748 1.01899018 12.83084576 1.34090403 10.30319202 11.60111135 7.74859004 0.34084708 8.24417686 10.93167161 1.34090403 7.51881522 6.72632853 NA 4.58882255 10.03403588 10.62166821 5.43682146 10.55521663 9.70809375 11.41717863 -0.39611852 11.27576776 14.30111665 8.69463543 10.23783531 7.35212466 11.39658664 3.30436501 7.25976115 9.32901413 9.84710591 0.01891898 10.81338520 10.25139033 5.18889540 5.12749297 10.20570260 11.58097324 10.49698057 10.87617281 12.48159943 8.55618759 10.51906427 10.10941267 10.58025734 11.76148936 5.45359659 12.66715841 10.59521747 NA 10.34061567 9.88663428 2.41129065 4.39400645 7.89395067 9.52180123 10.89010457 11.08303847 0.34084708 9.07289523 11.22796575 9.60580913 10.01402982 8.50479873 0.583400 0.583400 0.589190 -0.573030 0.538010 2.482800 0.597100 -0.581030 -0.567140 -0.952750 -0.952750 1.637400 0.041741 0.034966 -0.314820 0.593860 1.755000 0.028763 0.812980 -0.565250 -0.489630 -0.538040 -0.509290 0.583990 0.583990 -0.533680 0.010146 0.010146 0.658850 0.583400 0.583400 -0.545490 -0.577430 -0.076278 -0.563760 0.577010 0.577010 -0.563060 -0.567140 -0.603220 0.558330 0.037641 -1.164900 -0.546330 -0.546330 -0.543000 -0.578320 0.034966 0.052383 -0.314820 -0.596240 -0.571820 0.322050 0.028763 -0.339410 -0.339410 -0.565250 -0.489630 -0.538040 -0.552940 -1.292900 0.583990 0.218830 -0.533680 0.010146 0.047410 0.616790 -0.339820 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.573 -0.098 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.573 -0.098 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 0.000 6.36769780 11.07848282 3.97316122 8.30783559 1.90650583 10.48453574 NA NA 8.66282572 6.46605280 NA 5.44674256 NA 11.21079972 8.82067776 0.01891898 5.10643208 9.32103696 7.92435647 11.33539231 9.88119596 8.00623350 10.94489460 2.01895458 10.45568086 9.36714432 -0.98108102 4.94970767 10.93129738 2.34090403 12.15347591 13.22926021 6.29509299 10.47146804 7.98331002 9.83914835 1.34090403 2.10644883 NA 6.69139458 8.71071278 9.81946494 10.31760481 0.82635527 9.39026678 6.90771270 9.61002416 6.43259702 9.97352920 NA 11.35114579 -0.98108102 6.42836017 9.70797146 6.61538245 -1.98108102 8.77385691 7.03019701 5.63367823 -0.98108102 13.79118083 1.01899018 10.75769502 NA 5.09578521 5.29509483 8.53368326 5.32275020 14.791498 5.691395 10.790046 13.383001 9.765903 10.974801 13.257187 13.944014 9.620740 10.444710 12.351985 9.353801 9.329014 8.978247 -0.981081 7.801968 11.156601 10.1225850 7.6610213 9.4325972 8.3820092 9.6015818 9.5880986 5.0850592 3.6914002 11.4065829 6.0904322 2.2669064 5.1988791 7.6300494 8.5503509 9.5459576 8.3588195 9.2519898 12.5450406 1.6039289 11.7368835 5.4368215 9.8569914 9.7888072 11.6560470 9.1288001 10.4517722 9.1540373 NA 9.0035873 0.8263553 10.8133852 4.2284262 10.2585679 10.2057026 7.8664963 14.1031134 11.1720463 9.3089883 12.8145525 9.1229129 9.2435741 -0.9810810 TCGA-A8-A075 42 0 NA 518 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 6 3 4 1 1 3 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.733986e-06 5.548757e-07 10.5110651 9.9975044 11.6331802 9.7076042 8.7394205 9.7388153 10.3559078 9.9694008 10.3440173 12.7091499 10.1285068 10.7925902 3.2206859 12.2173282 3.1641105 9.0661818 3.4744490 8.9663015 7.5863414 13.1808051 1.9796961 13.5192391 7.0438136 9.0788641 12.2694930 7.5174316 1.5202462 8.7586570 10.1261945 3.2751412 8.6248506 6.8689805 NA 6.7776393 10.6258332 10.2659264 9.6559614 9.7592539 9.7987015 11.0243262 10.1248053 10.4413491 14.7320643 9.1749506 9.8909394 11.0993322 10.7125449 3.2206859 1.6901936 9.3146680 10.1997322 NA 11.2332089 5.4150691 6.6339949 5.9211316 10.4740847 11.5917144 10.6339942 11.3300202 12.9237302 7.7466641 10.4120357 9.7649132 10.8617709 11.1070918 4.4271435 12.3299197 9.1595929 NA 10.5213083 10.1326599 3.3296690 5.6598047 8.6248506 9.6090404 9.9007132 10.7041975 0.1052758 10.3097857 12.1280447 12.3176096 9.8257438 8.7538716 -0.4559700 -0.0049844 1.2027000 0.3375500 0.3056900 0.3590400 1.0498000 0.3356300 0.3301100 -0.4889000 -0.4889000 2.1150000 -0.4764900 0.3535900 0.3440600 0.3664100 0.3664100 -0.4922500 0.7385300 -0.4500700 0.1873700 -0.0280810 -0.4360700 -0.4360700 -0.0089906 -0.3917400 0.3841900 0.4051100 0.4056100 -0.4559700 -0.0354480 -0.0789430 -0.0496950 0.3521800 -0.0557690 -0.9248800 -0.0770420 0.3356300 0.3301100 -0.5081500 0.3416100 -0.4808100 -0.4889000 -0.4553300 -0.4553300 -0.4553300 0.0840650 0.3386900 0.3473000 -0.4745900 0.3664100 0.3210900 -0.5018300 -0.4712000 -0.0804850 -0.0406160 0.3972800 0.5967400 -0.0280810 -0.4295300 -0.4360700 -0.4360700 -0.4830200 -0.3917400 0.4051100 -0.0377620 0.1604000 -0.4383200 0.354 0.354 0.344 0.344 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.236 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 0.168 -0.135 0.354 0.354 0.344 0.344 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.236 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 0.168 -0.135 8.7598506 13.4753116 6.3016114 9.8500483 4.2751412 11.1855880 -1.4795526 NA 8.1926775 8.1623037 1.1052087 7.6626143 2.3276011 10.3007918 9.1377195 3.8778031 8.0477292 9.2942155 10.3606366 10.6294298 9.9196048 8.1070920 10.2788917 2.2207014 8.6826435 9.6385443 2.8421743 NA 11.0090964 0.1052758 12.5705259 12.2262084 6.5426202 10.2464702 7.9125696 9.2999715 4.3782342 2.8421743 0.8422146 8.6339942 7.7442540 9.1331206 10.5478125 3.2206859 8.6845432 8.3531420 9.9616401 6.2684456 9.3727815 NA 10.0839250 3.2206859 3.2206859 8.7902788 6.1808182 8.3766776 9.6469565 8.6725371 10.3475948 1.1052087 13.6972043 1.5202462 10.4719010 NA 9.6004034 3.2206859 8.7975396 9.2198246 12.541584 5.903957 9.067147 12.217328 9.963714 11.434076 13.180805 11.405948 9.472826 10.307338 12.348389 10.743047 9.314668 10.141846 1.327630 7.545392 11.054798 11.4435796 3.2762138 8.6248506 8.7681797 8.3308237 10.6938980 7.1312767 8.9465168 10.1285068 7.1238783 -0.4797538 5.6287765 8.2300767 10.4480301 10.3971526 9.4322431 9.2566541 9.5775669 9.0786728 10.6988297 9.6559614 10.5223639 10.2655062 10.4454356 9.8843867 10.8841130 9.5598566 0.5202462 9.4442331 8.8931170 11.2332089 8.0181039 10.2460444 10.4740847 7.8867928 13.6325694 10.1482418 10.4594640 12.2774337 10.7714385 9.9412649 3.5646464 TCGA-A8-A076 66 0 NA 1642 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma NA NA NA 6 3 1 NA 2 3 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-06 2.427581e-07 9.7696837 9.9081305 11.2353472 9.7173443 8.7642367 9.6940954 9.2640496 10.3986159 9.1832376 14.7576482 10.5913009 11.0589206 2.1653010 15.7722221 3.3028162 8.8629782 5.3245154 8.4370900 7.7741248 12.8797902 2.1653010 12.9798448 0.5803385 8.9271151 11.0831850 7.1441218 0.5803385 9.0568726 11.3121814 2.5803626 7.0817923 6.8244789 NA 4.4678794 10.1456457 10.8666800 9.2213213 10.0821904 10.3442295 11.3590875 2.5803626 10.1023462 14.7678445 7.9222680 9.6043848 10.8050785 10.4902463 3.4678794 3.4678794 8.7280671 10.8084504 1.5803385 11.0064083 5.3773667 6.6635666 5.8950505 10.1082211 11.8597317 9.4107100 11.9616799 12.7503409 7.7280668 10.5051658 9.8262957 11.4772911 10.5374553 5.2918466 11.6518156 9.6038303 -1.7417826 10.2449782 9.3298876 3.5017958 6.9657843 10.4751710 9.4189270 10.0928963 10.5879412 1.5803385 9.6170764 12.5856269 10.7915115 10.4135596 9.7452602 -0.02972100 0.69858000 0.00227710 0.00138680 -0.02315400 0.02496900 0.05922300 0.36264000 -0.35704000 0.53907000 0.53907000 1.69300000 -0.37076000 -0.34733000 0.00013863 0.00013863 0.00013863 0.36149000 0.36313000 -0.73573000 0.36559000 -0.35768000 -0.73389000 3.65690000 3.65690000 -0.12875000 -0.12875000 -0.13678000 2.56620000 -0.73705000 -0.02972100 0.00000000 -0.00013862 0.02496900 0.02496900 -0.69178000 -0.30798000 0.36264000 -1.10330000 -0.35704000 0.42553000 -0.29627000 -0.72367000 0.00638710 -0.73652000 0.01377200 0.01377200 -0.34733000 -0.34733000 0.00013863 0.00013863 0.00013863 0.00013863 0.36149000 0.40094000 0.36264000 -0.73573000 0.36559000 -0.35008000 0.01195800 -0.73389000 -0.72332000 0.00638710 -0.12875000 -0.13678000 1.08190000 0.50012000 -0.35578000 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 0.316 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 0.316 8.3992548 13.7947027 2.4283568 9.7260308 1.9499457 10.9359246 -1.7417826 NA 7.9675087 7.8950499 NA 8.7602622 -0.7415414 10.3973369 9.2471098 3.1163980 6.9692311 10.2594814 10.2260117 10.6394273 9.8604836 8.8254304 10.2615917 -0.1566593 8.9255366 9.3702129 3.4283568 4.1653171 11.9157436 2.7819891 12.2072486 12.1147534 7.6399679 9.5357126 10.2527786 9.6099165 9.5775327 2.0657791 -0.7415414 7.3564573 9.1630599 9.4420606 11.0837815 3.4283568 8.4072703 6.4920454 9.5673329 6.6115723 9.2987149 NA 10.0120598 3.0657791 3.1653171 9.1588164 5.3406798 5.5713067 8.6752228 8.8452648 9.2256514 NA 13.5139701 0.5803385 10.8386837 NA 7.7219495 3.8130115 8.5993881 8.1023463 12.8601379 5.9931354 8.5915807 15.7722221 9.7951580 10.3261956 12.8797902 11.9073444 8.9536535 10.6992943 13.1577821 9.4239603 8.7280671 9.0897325 0.2584586 8.8072470 12.3844036 11.181195 6.084974 8.913956 9.271748 8.203869 10.977031 6.730101 9.814931 10.591301 4.930851 1.258398 4.580351 8.437849 10.451951 10.140686 8.186203 9.249947 10.320134 6.443300 10.437606 9.221321 10.742996 9.966647 10.549596 9.105482 10.841508 9.584855 -1.741783 9.628360 5.958866 11.006408 8.944050 9.806125 10.108221 7.627368 13.332734 9.550172 10.338577 11.860312 10.662236 9.902281 3.467879 TCGA-A8-A079 69 0 NA 274 breast stage iiib t4b n3 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 2 5 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 3.81477e-07 10.1597731 9.6315831 11.6922259 9.4939563 8.6972400 9.3545533 10.1661690 8.4980182 9.3174911 12.4131781 11.1889621 10.6226194 1.0236102 12.2052028 0.7606042 9.8374176 7.6505621 8.8028084 9.2849478 12.8454768 NA 14.5546725 8.2492453 9.8892253 12.3804551 4.4830676 1.0236102 9.7136285 12.3055664 0.4387187 7.7918206 5.7054610 4.1110981 3.7962240 9.3612582 10.5061082 9.6469082 10.5432726 9.1382462 11.0556821 3.7240718 11.2812206 14.7077823 8.3035721 10.0137355 11.8107227 10.7642604 4.6085964 -1.5614942 9.1682945 11.2480401 NA 10.3312167 4.1391175 5.3928703 5.9144067 9.0897256 12.0643827 10.0883791 12.1520604 12.7539650 8.9103492 10.9853272 10.2428049 11.5519277 11.1520604 4.8309905 12.0469287 10.2379555 -0.5612813 10.2927630 9.1597730 3.1402224 5.8480645 10.2676037 9.2958773 10.6578424 9.6680936 2.9622344 9.6142234 11.6412569 9.6254071 10.6076593 8.8363486 -0.415970 0.242500 0.242500 0.129250 0.064953 0.297580 0.245750 -0.396750 -0.943490 -0.755480 -0.755480 2.148500 -0.084262 -0.084262 0.285960 3.656900 3.656900 0.162650 0.162650 -0.775690 0.086956 0.000000 -0.313070 -0.367370 0.475980 -0.015054 -0.015054 -0.015054 0.732270 -0.487990 0.746700 -0.490260 0.129250 0.297580 0.159950 -0.015191 -0.015191 -0.937100 -0.452110 -0.415460 -0.184710 -0.301890 -0.353390 -0.270210 -0.270210 -0.270210 -0.270210 -0.084262 -0.084262 0.285960 -0.831300 -0.388730 -0.080275 0.162650 0.162650 0.162650 -0.775690 0.086956 -0.054960 -0.782100 -0.313070 -0.367370 0.172110 -0.775070 -0.015054 -0.405840 -1.179500 0.219140 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 -0.391 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.104 0.633 -0.270 -0.270 0.000 0.000 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 -0.391 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.104 0.633 -0.270 -0.270 0.000 0.000 7.8607388 12.1649985 6.0897248 10.6517781 3.9531162 9.5406496 2.5261440 NA 8.9942216 5.9385187 -1.5614942 7.1594657 0.4387187 10.5890559 9.5640874 4.5261377 6.3515630 9.8400868 11.8015766 11.2550576 9.6081042 8.3455645 9.2540571 2.9622344 9.6260260 10.1733834 2.3455667 -1.5614942 10.7191547 1.4386655 12.8515083 12.0630124 4.9932622 8.9001534 7.6358908 10.1088874 4.6481260 1.8980922 0.7606042 6.4216677 9.3979514 9.6716943 9.5221533 2.8981116 8.0188762 7.5020688 10.2672071 7.4073409 10.7124695 -0.5612813 10.8234576 3.1391093 3.8981019 9.3500808 7.1436148 5.8898848 9.0047278 7.7807484 10.9467162 0.4387187 13.9438341 -0.5612813 10.2403822 1.0236102 7.2428045 2.9622344 7.5287862 8.2950994 15.33584065 6.08253016 8.10578544 12.20520277 9.03393143 10.61764983 12.84547676 13.36659069 11.91444908 10.73673644 11.93027648 11.20520280 9.16829454 9.22249064 0.02361022 7.48852224 11.41326769 10.519491 7.966151 7.972004 9.466580 9.096885 10.087000 6.672294 4.166595 11.188962 8.511476 -1.561494 5.796227 8.057096 9.316725 9.258853 9.987977 9.944485 11.984483 6.252455 13.618633 9.646908 10.588738 9.608599 11.310579 9.091519 10.601380 8.590959 NA 8.798972 7.012321 10.331217 5.392870 10.401570 9.089726 7.896055 14.683168 10.426648 9.141712 12.001393 9.653600 9.968592 1.438665 TCGA-A8-A07B 69 0 NA 1308 breast stage iia t2 n0 m0 female 2007 NA no infiltrating ductal carcinoma NA NA NA 6 3 1 NA NA NA 2 2 4 1 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 5.201959e-07 10.969438 10.616308 11.322652 9.353740 7.281112 7.603040 10.783382 9.336866 9.169061 7.866075 11.176457 10.286980 NA 15.219829 3.079481 7.499017 6.024337 7.876491 11.876815 12.653693 NA 13.255651 6.664440 7.824607 12.009920 6.866075 2.927479 9.233283 11.255901 NA 9.729094 6.249404 NA 2.927479 9.834365 10.640193 8.679391 11.762824 10.561681 11.939013 9.072699 10.223116 14.216149 6.600655 9.504064 10.715378 11.994760 5.042951 6.590440 9.355602 12.107384 NA 11.393721 6.166940 5.640193 4.512435 9.704456 12.187480 9.834365 11.707012 12.847828 6.327405 11.112901 10.296709 11.162691 10.873244 5.149869 12.833530 12.500912 NA 9.609299 10.913633 4.216982 5.986368 8.141254 10.049872 10.374099 12.658228 6.149867 9.694188 12.144759 12.318838 9.623283 8.532337 -0.34618000 -0.34618000 -0.02425100 0.04174100 0.01241400 -0.42303000 0.04060900 0.02349100 0.08966300 -0.55957000 3.13330000 3.36990000 1.35150000 0.07254000 0.00000000 3.34390000 3.09650000 0.03002900 0.02004900 -0.83025000 0.06579900 -0.44113000 -0.81186000 3.65690000 0.57755000 -0.04888300 0.80305000 1.50450000 -0.35316000 -0.34618000 -0.34618000 -0.19358000 0.04174100 -0.34756000 -0.82032000 -0.00579470 0.00027728 0.02349100 -0.40252000 0.11404000 -0.84971000 -0.00733390 -0.55957000 0.01042400 0.01042400 0.00257000 -0.82773000 0.07254000 0.10862000 0.00000000 -0.84355000 -0.81359000 -0.81359000 0.03002900 0.02004900 0.07325800 -0.83025000 0.06579900 -0.44113000 -0.81318000 -0.81186000 -0.83752000 0.01670500 -0.04888300 1.50450000 0.42940000 0.01810300 -0.85082000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 0.000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 0.000 7.8073987 12.5226288 8.8343655 8.6793907 5.0598701 11.0929403 NA 0.7575354 8.1838145 9.0636116 NA 9.0429521 2.9274793 10.4562546 9.0636116 1.7575354 6.2004926 10.6014710 9.9803448 10.8269997 9.0425590 8.8423582 10.4211080 NA 9.4246614 9.8634584 4.4014052 NA 11.9302899 NA 12.6481942 11.9541521 7.2573954 9.1477188 8.8236392 9.3140559 7.7519035 3.4579882 NA 6.3722591 7.1921784 8.1584294 11.0307627 2.9274793 7.7801395 4.5124355 9.6232833 5.9863677 9.8101180 NA 10.8926179 2.3425263 4.7575514 9.7802922 6.0340462 NA 8.3005818 7.8608374 7.8555818 0.7575354 13.7183664 1.7575354 9.8343655 NA 7.5713310 2.5649147 7.9022081 6.7117468 13.497120 6.327405 7.596754 15.219829 8.998341 10.269303 12.653693 8.216982 10.690503 11.130415 12.978382 11.168001 9.355602 10.034837 1.757535 7.551966 11.020232 10.947374 5.216982 8.952307 9.007848 7.855582 9.803760 5.886833 1.342498 11.176457 4.845013 2.757557 6.652367 5.683312 12.402758 7.751904 6.167789 9.202565 11.950767 4.149869 12.495988 8.679391 10.471795 8.047569 11.208761 8.983962 9.200493 8.700064 NA 8.670768 2.342526 11.393721 8.288932 9.555211 9.704456 7.876491 13.764928 9.946139 9.609299 11.999831 10.862149 8.525734 NA TCGA-A8-A07C 57 0 NA 1034 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 4 4 NA NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.502653e-06 8.669932e-07 9.9014447 10.7292863 11.5485709 10.4831940 8.8714466 9.4095038 9.0786619 10.2049612 8.1660827 11.6724676 10.6260002 10.4424142 3.6742346 11.7893819 5.8307345 8.1687523 5.1660847 9.1607296 15.4028059 8.1990981 NA 5.5071191 9.4890793 8.7421123 11.3766912 5.6128302 0.4112093 9.8722655 11.5147455 1.2591821 8.6245429 8.0593731 -1.9105018 6.3228872 10.1889439 10.9931492 9.4853369 11.2388557 10.6344732 8.9331884 2.2591821 10.9863565 14.8262373 9.1247745 8.2852547 12.1863118 12.2689432 3.3371973 NA 10.6123391 11.9331884 NA 10.2932270 4.6438562 7.0948916 4.7331211 8.8958170 12.0762648 9.9829481 11.9281758 13.1298139 4.8574536 10.2111245 10.7860133 11.8098323 12.0105504 5.4616955 12.5488911 9.4440678 NA 9.2383794 10.3513622 3.6432444 5.2691753 7.9253177 11.6461326 10.4920130 11.3970374 -0.3257201 3.5811222 11.3407497 11.7061607 10.1710836 9.0807893 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4912134 11.9888131 6.2236928 8.1486118 2.5222316 11.6827752 2.4111822 -1.9105018 8.5801183 8.3072249 1.8966206 9.2870493 1.8966206 11.3858968 8.9795315 4.1553526 7.6303640 11.8356767 6.9749640 8.4965351 9.4340070 8.5113320 10.7625764 1.0892947 6.2491381 9.4173812 1.4112093 NA 9.4869420 5.3371937 12.2466932 12.5010431 7.3204883 11.4854707 7.6380890 9.5171040 6.1281862 3.1336622 0.4112093 0.6741894 8.9550006 8.7195346 8.8763536 6.1767297 5.8107773 3.8441546 10.6012670 7.9764879 10.4027173 -0.3257201 12.9942782 2.6742346 5.6049668 10.0446774 4.4284037 6.8474909 7.9810512 9.0913791 8.0434637 2.7897084 13.0198199 -0.3257201 9.5801182 -1.9105018 9.3998801 4.2987243 7.8804302 7.4201843 8.991680 8.145905 7.888549 11.789382 10.868166 11.120452 8.199098 11.232969 9.565507 12.048001 13.361095 10.935345 10.612339 8.175403 3.043467 9.236472 11.232332 11.540994 4.934757 8.973438 9.768308 5.197791 11.300136 6.662915 4.718625 10.626000 9.761693 4.411196 10.479705 8.847182 12.630485 10.802439 7.971910 8.192555 10.124066 7.955001 10.463043 9.485337 9.157374 10.480242 8.042008 11.833576 10.790141 10.158046 NA 8.701205 7.925318 10.293227 6.171417 10.667508 8.895817 8.399414 14.194971 10.738523 11.026641 13.052841 10.872675 10.999723 3.259197 TCGA-A8-A07E 81 0 NA 608 breast stage x t4b n3a mx female 2008 NA no infiltrating ductal carcinoma NA NA NA 8 2 2 NA 2 4 3 4 3 3 NA NA 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 2.427581e-07 9.9306356 10.0893158 12.1928050 10.0260993 7.5847904 9.0233213 10.5090887 10.1476934 9.8802063 13.0072442 11.4844853 10.7186188 3.2411690 11.9197939 2.8972211 10.1819034 4.3260555 8.2709143 9.5147507 12.5183488 2.9516624 12.5604286 8.4600422 9.1647197 10.6035094 4.2191375 -0.8031412 11.4252911 10.9067184 4.8406294 8.3890660 8.0233213 NA 5.5718133 10.2432149 10.9501986 9.4553389 11.4553390 10.4019553 11.9440219 6.1911263 10.4153362 14.8342469 9.1493394 10.3231516 11.2566244 10.8293138 5.2735868 5.2948045 9.2908506 11.4024135 0.1967329 10.8784506 6.3816485 5.5630940 5.3865971 10.6605527 12.0203392 10.0133567 12.8474321 13.0365180 7.7723119 11.0539764 10.6828990 11.3710745 11.7637783 5.4062271 12.2129719 10.5793970 2.2842476 10.0866572 9.2581441 3.2498852 5.3666964 10.6846130 10.0824694 10.4962672 9.9331749 4.4821771 10.7964534 12.5943808 11.9499897 9.6177859 9.4890945 -0.00346270 0.45479000 0.45479000 0.00152550 0.01488800 0.91299000 0.00194180 -0.00060118 -0.00060118 -0.49350000 0.00180300 0.46280000 1.30370000 0.47907000 0.00694350 3.24810000 -0.07401000 0.00000000 0.00000000 0.00346870 0.00138680 0.00416320 -0.47723000 -0.47723000 0.08565400 -0.00083160 -0.00083160 -0.00083160 -0.00041585 0.00064225 -0.00346270 -0.00719580 0.00152550 0.01167900 -0.48461000 0.00194180 0.00194180 -0.00060118 -0.00060118 0.00069327 0.00017132 0.00763920 -0.49350000 0.00249690 0.00249690 0.00249690 0.00249690 -0.49162000 -0.01409000 -0.50204000 -0.02712400 -0.49527000 -0.49527000 0.00000000 0.00000000 0.00000000 -0.00152430 0.00138680 0.00416320 -0.49761000 -0.47723000 -0.47723000 -0.00083160 0.01531700 -0.00083160 -0.00041585 0.00666530 -0.48586000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 0.000 9.3228320 14.0661981 5.6146245 10.2121880 2.9387751 10.5352309 0.5187365 0.7817374 8.7252272 9.3921452 NA 8.2024956 5.4913946 10.4772537 9.0817066 2.3666999 11.5448095 10.0446134 10.0659813 9.7789149 9.6546616 7.8954777 12.1969491 3.1509658 8.1156362 9.7242500 7.2023972 NA 10.2540878 2.1967644 12.5373185 12.3896052 8.6521003 9.7005987 8.7173916 9.5096559 5.5890893 1.8972017 NA 7.0201399 8.0885566 8.8876441 10.4384583 6.1156367 8.2719980 6.5187004 9.7475198 7.1509688 9.3026814 -0.8031412 11.4479595 2.3666999 4.1967723 9.7578127 6.1391113 1.1967959 10.0217316 10.2343199 6.5321626 1.1967959 13.5406180 1.8972017 10.3414312 NA 7.9399241 6.2411671 7.6562046 8.9449659 15.454395 6.495981 8.860331 11.919794 10.184037 10.689127 12.518349 12.309050 9.067908 11.175126 13.257933 10.152423 9.290851 8.660297 2.518711 7.320894 11.350483 11.6784463 5.9246938 9.1726210 8.9748502 8.3704503 10.8599708 6.8077980 8.6240859 11.4844853 5.1392894 0.7817374 6.1334115 7.2438699 11.7180053 10.4270936 8.0547541 8.5265693 11.9511386 5.9246938 10.9810725 9.4553389 10.4053122 9.7178825 10.9834510 10.9651641 10.7225384 9.2212200 1.7817374 9.4314466 4.1740548 10.8784506 5.7045677 10.7349619 10.6605527 7.2815814 13.9716372 10.3085607 10.1647197 12.5957838 10.8667652 9.5658251 2.1967644 TCGA-A8-A07F 65 0 NA 577 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 5 3 3 NA 2 4 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6.242351e-07 2.080784e-07 11.1654148 10.6245153 11.9024845 9.9175957 8.5236815 8.9245801 10.1407527 10.1509485 9.1304843 9.3081274 11.3967725 10.7533225 1.3131297 12.4279000 5.3231286 9.4969187 6.1544475 8.7579303 10.3816251 13.1844518 2.4651386 13.3814012 6.4146835 9.0429097 11.6252720 2.9505804 -1.8567372 9.3660153 10.0000349 0.9505431 8.9673836 7.2333330 12.0976894 4.6823767 10.3112657 10.9184192 10.2753988 10.8185160 10.9078847 12.7610322 5.2306834 11.6710639 14.5089619 10.0640125 9.3532829 12.2451140 11.5629173 4.4286248 3.9245845 9.4152668 11.4542591 -0.2717747 11.5400927 5.3526738 6.1432199 5.3623892 10.5755013 12.0080836 10.2123345 12.9129033 12.5050957 7.8677340 11.3338168 11.0471926 11.7327545 10.8702900 5.6026528 12.1718172 11.7937112 NA 10.2412526 9.6608898 3.9251069 5.8643199 11.3361297 10.2598893 10.0816974 11.1807674 0.9505431 9.6510151 14.2354201 11.5918530 10.5686986 9.0650614 -0.51714000 1.51440000 1.51440000 -0.51487000 -0.52233000 -0.00057549 -0.00507240 0.51836000 0.50455000 0.50913000 0.50913000 0.50913000 0.02621200 0.01990100 0.51574000 0.51574000 0.51574000 0.00970650 0.00000000 -0.52830000 -0.51806000 -0.50486000 0.01500700 0.01500700 0.01500700 -0.00168390 -0.00168390 -0.00168390 0.02916300 -0.50143000 -0.51714000 -0.49570000 -0.52233000 -0.00057549 -0.00057549 -0.00334540 -0.00334540 0.51836000 0.50455000 -0.02118700 0.52483000 0.52921000 0.50913000 0.52973000 0.52973000 0.52973000 0.52973000 0.01990100 0.01990100 0.51574000 0.51574000 0.51574000 0.51574000 0.00970650 0.00000000 0.00000000 -0.52830000 -0.51806000 -0.49966000 -0.52786000 0.01500700 0.01500700 0.01780200 -0.00168390 -0.00168390 0.01740000 0.01347100 -0.51302000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 0.000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 0.000 8.8880543 13.4109215 10.0391743 9.6765502 2.5674724 10.8440936 -0.8567372 -1.8567372 8.9031085 8.1683602 NA 8.8219790 -1.8567372 9.5731501 8.7625232 2.7281817 6.7689293 9.6687412 9.3532829 9.5333893 9.7113333 8.5642333 10.3702346 2.3131588 9.7852721 9.4600676 2.7870772 0.1432628 10.3723397 4.2517418 12.1115272 11.4643029 7.7762159 10.2173618 8.5323138 9.1197846 4.0501098 1.3131297 0.4651909 4.6189551 9.0478552 9.1024980 9.6934863 2.5355305 8.3257264 5.3428925 10.4452881 6.9980883 9.4105923 -0.2717747 11.3738414 3.0501186 4.3330444 10.2276635 5.2257955 3.8156472 8.7281828 8.2517447 6.9080923 1.1431975 12.7764995 0.7282253 10.2066155 NA 7.6390751 4.3526738 8.7253625 8.5149972 12.426992 6.056109 9.213341 12.427900 9.367825 11.462893 13.184452 12.090949 9.597520 11.394407 13.749134 10.602652 9.415267 8.082799 1.143197 7.471895 12.026818 11.813213 7.485295 9.323751 9.129062 9.434391 11.541105 6.779845 4.483068 11.396772 4.292966 1.465139 4.728182 7.766261 12.855532 11.015895 7.645057 8.213341 13.875361 5.757930 11.771672 10.275399 9.667272 10.368729 11.428912 9.878777 11.349930 10.453833 4.884686 10.141102 4.787077 11.540093 7.891413 10.566260 10.575501 8.380490 12.628295 9.375042 10.624515 13.156543 10.757240 10.416725 2.391135 TCGA-A8-A07G 65 0 NA 577 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 3 1 NA NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 9.52003579 10.60773680 11.84236869 9.84815861 8.65274640 9.16621130 9.96776461 9.61470488 10.11038647 13.47575500 10.14755093 10.54744009 -1.54203806 13.66133765 3.98155130 9.20198249 5.27816693 8.13922799 8.83628458 12.70976790 0.04292445 13.22369014 7.69400400 9.46150748 11.03068989 5.63790001 NA 12.04414685 10.18165059 4.43526854 8.33450660 8.10544813 NA 4.36488055 10.61943649 10.56814662 9.62415282 11.60598946 10.30387171 11.53330165 0.45796194 11.09416110 15.32491839 8.19640295 9.36262418 11.04154260 11.88254963 4.85030938 3.62791029 10.87320323 12.45816573 NA 11.07958372 5.58727197 6.35885688 5.29088144 10.61659929 11.56062154 11.03045306 12.69160932 12.69669293 9.46221002 10.91537054 10.29253572 11.10859267 11.11083464 4.98155130 12.19734836 10.85886911 -0.54203806 10.91177471 8.83302921 2.46519089 5.13041612 9.21787775 9.33986826 10.45587481 10.26333048 4.13041200 8.88530255 13.13763467 11.49227277 9.73643914 9.30347962 -0.1206900 0.6905500 0.7124800 0.0000000 2.5410000 0.5180400 0.3680500 0.0212060 -0.0749360 0.0713910 0.0713910 0.1444400 0.1206400 -0.0696190 -0.0758780 0.1746500 0.1746500 -0.1352300 0.2243700 -0.4366900 0.0540910 -0.0431950 -0.3063900 0.3490900 0.3490900 -0.1247300 -0.1247300 -0.0989450 0.5392500 -0.1588600 -0.1206900 0.1140400 -0.4390800 0.2445100 -0.2446000 -0.1357400 0.3593700 0.0451410 -0.0749360 0.0469840 -0.1284900 -0.1284900 -0.5342900 -0.4094800 -0.4094800 -0.4094800 -0.4094800 -0.1392300 -0.1387100 -0.1453000 0.1746500 0.1190200 0.1490500 -0.1352300 0.1505400 0.1027800 0.0304510 -0.4233100 -0.0237030 -0.4371300 -0.3063900 0.3490900 -0.3879500 -0.1247300 -0.1247300 0.0144700 -0.0042929 -0.0912870 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 0.000 8.96280869 14.10797552 8.86844108 9.94984276 3.92526839 9.44951144 1.91743176 NA 8.05604209 8.05417938 NA 8.16450271 3.21288057 10.68168969 8.55996514 1.45801446 8.35280751 9.14273839 10.99131939 10.60995751 10.45107312 7.47479781 11.01856129 2.85029937 8.45516897 9.83248578 2.36488055 NA 10.81168785 2.54544950 12.60416051 12.31927044 8.75834216 10.39903722 8.53614035 9.15756219 4.18590618 2.36488055 0.04292445 1.45801446 8.60519465 10.03683408 10.16707349 4.01257761 8.03724878 5.64781528 10.12021299 6.34673356 10.07866774 -0.54203806 11.79700450 3.31597191 4.41218536 9.55765305 4.79230877 5.08734827 9.12332554 8.50511365 6.38872683 4.04295070 13.94790031 1.45801446 10.37050477 0.45796194 9.38872705 4.96578428 8.65643452 9.93776986 12.78343566 5.30348122 9.13394671 13.66133765 9.73991964 11.41907755 12.70976790 12.64619212 10.09629889 10.68259436 13.01299810 8.82212433 10.87320323 9.42953312 0.04292445 7.15147630 12.13052549 10.802840 6.858869 8.671094 8.933723 8.426656 9.067722 6.896782 5.788908 10.147551 6.811137 6.012578 5.534806 6.363917 12.933153 10.285729 8.802286 8.587273 12.913510 6.480357 12.029189 9.624153 10.544789 10.266552 11.536307 9.000054 10.177378 9.551407 NA 9.834359 6.880055 11.079584 8.958832 9.623525 10.616599 7.610503 13.752072 10.048109 10.749448 13.216005 9.733532 9.225347 1.265317 TCGA-A8-A07I 69 0 NA 426 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 3 1 NA 1 6 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 10.260126 11.151334 12.442391 10.306076 7.986157 9.341320 10.774388 9.880110 10.372848 14.537940 10.374286 11.288380 2.519190 16.820537 3.140664 9.153012 5.326534 8.380981 7.003613 13.295042 -0.181313 13.369485 3.462589 9.620164 10.920058 9.325542 -0.181313 11.081943 11.138410 1.818728 9.093699 7.657942 0.403704 5.689103 10.237118 10.201903 9.586923 11.105585 10.277658 11.245527 2.278163 10.957010 14.923440 7.719877 9.986784 11.484962 10.970389 6.037907 7.334439 9.462594 11.038814 NA 11.394278 5.638917 6.632520 5.342299 9.971023 11.993196 9.569445 11.846644 13.019331 7.202442 10.786685 10.195851 11.755192 11.958609 5.085527 11.691413 12.311968 -0.181313 10.363220 9.693720 3.213798 6.484074 10.337883 10.584853 10.139539 10.113359 2.403704 5.176291 12.947136 11.842839 10.170230 9.499098 -0.7080100 1.3214000 0.6627200 0.0000000 0.0000000 -0.0018014 0.0027745 0.6582900 -0.0040162 -0.7004600 0.8558100 0.6719200 -0.7010900 0.0111210 0.0049969 0.0049969 3.6569000 0.0058309 -0.0041546 0.6229700 0.0083351 0.0228650 -0.6862400 3.6569000 1.9253000 -0.0087146 -0.0087146 -0.0087146 0.0258120 0.0137720 -0.7080100 -0.0257680 0.0000000 -0.0018014 -0.0018014 0.0027745 0.0027745 0.6582900 -0.0040162 -0.0040162 -0.7241100 -0.7103300 -0.7073800 0.0095883 0.0095883 0.0095883 0.0095883 0.0111210 -0.6988400 0.0049969 0.0049969 -0.7059400 -0.7059400 -0.0041546 -0.0041546 -0.0041546 -0.7066600 0.0083351 0.0314360 0.0339720 -0.6862400 -0.6866100 0.0137720 -0.0087146 -0.0087146 0.0258120 0.0056919 -0.6916900 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 0.000 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 0.000 8.9441519 14.1575444 6.6891034 9.9008875 4.5466599 11.6383188 2.8187483 NA 7.4260685 8.4205094 2.9886665 8.7093827 4.0281890 10.3544998 9.0913682 0.8187688 8.2554497 9.4688926 9.8438779 8.8271671 9.5062715 8.1087570 10.6871751 2.8313098 8.8411061 9.6309158 2.2781632 NA 12.6684367 2.2781632 11.7650964 12.1909233 7.9811300 9.7361105 10.4733745 9.0642912 4.7729361 1.8187279 -0.1813130 3.7729308 7.5087360 9.5694453 9.8424927 1.9886665 7.3064582 5.3265338 9.3471926 5.6389166 9.1905151 NA 11.2588289 3.5736290 3.4625890 8.3935591 5.6520074 6.9886631 8.6389173 8.5364147 8.3005379 -0.1813130 13.0050848 1.6261120 10.9386522 NA 7.7758407 3.6767187 8.4279170 7.8928797 14.1433718 6.7196051 8.1959489 16.8205369 10.5951755 10.6654041 13.2950416 11.3381289 10.4785916 10.8386765 13.9576901 10.3828879 9.4625945 10.6867892 0.8187688 8.5398377 11.5875430 11.5945544 5.0855266 8.1630342 9.2046007 8.6066410 10.5272231 6.9008873 8.0523583 10.3742862 5.6767187 NA 5.9684848 8.5484952 12.7052924 10.1762904 9.0451505 8.7902820 11.3198291 8.1828730 11.8368116 9.5869227 10.4796257 9.7308792 11.5700732 10.3847924 10.9668972 9.0878651 0.8187688 8.7071013 7.7316279 11.3942776 7.8928797 10.6405124 9.9710233 7.5534481 12.3998212 10.1490951 9.1991995 12.2731662 11.2402773 10.1350200 2.9886665 TCGA-A8-A07J 35 0 NA 365 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 8 2 2 NA NA NA 1 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.81477e-07 9.5828523 10.2510461 11.5413694 9.6879738 8.1675265 9.0843851 9.8812221 9.5442613 9.7323435 12.8960129 10.7288281 10.4577148 -1.1202942 12.9369596 3.5802540 10.2833587 7.2017417 8.1790218 10.4491950 12.1767302 0.8797842 13.5102518 7.1229884 9.3732891 10.2624380 9.4591299 NA 10.8976663 8.3575722 2.4647728 8.3776656 7.8105511 NA 4.4344014 9.9955080 10.0910939 9.9337399 11.1657941 9.8201276 11.1553566 -1.1202942 8.9350964 14.7295367 7.6606163 10.6321904 11.8748744 11.3759187 5.1835937 5.2196642 9.8812221 11.2138078 -0.1201374 11.5548889 8.4722709 7.0396857 6.1559374 10.5940595 11.3364251 10.7547953 11.5324349 12.7715028 8.6128294 11.0333660 10.5456340 11.0045815 11.1666605 5.3555484 12.5554403 10.7647476 -1.1202942 10.6284261 8.6628122 3.5248285 6.8910412 10.7662726 10.0714901 9.7776594 9.7986772 3.2017436 6.2721315 12.9126346 11.9781751 9.9111705 9.7331235 0.00833510 0.00833510 0.00833510 -0.66513000 1.10440000 0.00360760 0.00013863 1.87930000 -0.67435000 0.00299830 0.00299830 -0.00388300 -0.00144600 -0.00144600 -0.00152430 -0.00152430 -0.00152430 0.00000000 0.00000000 -0.01503900 0.01000600 0.01614600 0.01167900 0.01167900 0.01167900 0.00069327 0.00069327 -0.00014023 0.01852300 0.00833510 0.00833510 -0.01216200 -0.66513000 0.00360760 -0.00541130 -0.00516750 -0.00516750 -0.65901000 -0.67435000 -0.67594000 -0.00203970 0.00263570 0.00299830 0.00724840 0.00724840 0.00724840 0.01852300 -0.00144600 0.02637300 -0.00152430 -0.00152430 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 -0.00346270 0.01000600 0.00624810 -0.65817000 0.01167900 0.01167900 0.00388540 0.00069327 -0.00014023 0.01852300 -0.00166290 -0.64415000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3826459 13.6651643 5.2017436 10.2023056 2.4183519 9.5415921 1.4647728 1.4647728 8.2329610 8.1253665 -1.1202942 8.1173584 4.8340083 10.3201641 8.8193932 0.8797842 9.5949180 8.6951973 8.9063375 10.0428346 9.8079992 7.3060790 11.2434012 4.5802540 8.1372017 9.7198050 4.1277406 NA 10.9804763 3.2017436 12.8725753 12.2960837 7.8628078 9.8692084 9.8296406 8.9499349 3.5802540 2.3392514 -1.1202942 4.8340083 8.6145236 9.2667542 10.1342521 5.9672770 7.5388462 5.4033768 10.3243113 5.9132365 9.3382205 NA 11.2274353 2.7867009 3.3392514 9.6563045 6.0847765 3.0497353 9.3994501 9.1170238 5.5522387 3.3392514 13.3505364 0.8797842 10.1194125 -0.1201374 8.3060786 5.4797253 7.8340102 8.7700781 12.619810 4.127741 8.409245 12.936960 10.517091 10.162902 12.176730 12.291854 9.302930 11.052866 12.890517 8.341293 9.881222 8.726871 NA 7.322757 10.983102 11.144257 8.274277 9.055987 8.590620 7.882629 10.220560 7.753258 7.029561 10.728828 7.103815 3.834013 4.272128 5.597078 10.780303 10.179022 7.759398 8.153610 11.874344 6.079487 10.352830 9.933740 10.528621 9.881222 10.209050 9.779171 10.749793 9.526373 NA 9.611727 4.879814 11.554889 7.715865 9.969264 10.594059 7.545150 13.479378 10.230201 10.585446 12.761215 9.928301 9.930343 2.786701 TCGA-A8-A07L 58 0 NA 975 breast stage iiia t3 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.219503e-06 6.242351e-07 10.3641631 10.1739810 11.2514654 9.5855907 9.4753056 9.3300015 9.5291615 9.4301516 9.4500806 13.5011210 10.4461877 10.5713640 NA 12.7132181 2.3619087 9.7461908 4.0697279 9.1666871 7.1415207 13.0584726 4.5843011 14.0058270 4.8812829 9.6309251 11.6862413 6.5894459 1.2623730 8.0229764 9.9468732 2.3619087 8.5062290 6.7814502 0.0399806 4.5424809 9.7264832 10.0352787 9.8164157 10.0952650 9.7386873 11.6205553 0.0399806 10.4189999 14.2709037 7.6208818 9.8670606 11.4376573 11.3883420 3.6249431 6.2165713 9.0277203 10.0993270 -1.5449819 10.6333737 8.7182894 4.1554578 4.6448427 9.8037483 11.8789239 10.2425146 10.4022918 12.7248043 8.9195659 11.2655917 10.2182325 11.1714109 10.7238545 4.7029456 11.1278874 7.6022252 NA 10.2392460 9.4994142 2.3619087 4.4322980 11.3901852 9.5635447 11.1419583 9.8278852 3.8125701 6.6981935 11.1163529 10.1897297 10.3505954 9.1132317 -0.7853000 1.1403000 -0.7530500 0.0602290 0.5968800 -0.0182160 0.0000000 -0.0055375 -0.8316300 3.6569000 0.7640800 2.4395000 0.0471260 0.7970400 -0.0194520 0.0539480 0.0539480 1.5564000 0.0353830 -0.8054200 -0.0579240 -0.7421200 -0.4526500 -0.3233300 0.7171600 -0.7362600 0.0607940 0.0607940 0.8486900 -0.7490700 -0.7853000 -0.7510100 0.0447150 0.7715600 0.6275200 -0.0105080 -0.0105080 -0.0058140 -0.8316300 0.0233300 0.0029133 0.0343950 0.7833100 -0.7275600 -0.7275600 0.0221640 0.5044600 0.0273570 -0.7816900 -0.0189020 0.0539480 -0.7769400 -0.7769400 0.0221640 0.0420130 0.0921700 -0.7862400 -0.7597800 -0.7832800 -0.7578000 -0.4526500 -0.3233300 0.7469600 -0.7591700 0.0607940 -0.7631200 0.7786800 0.1376100 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 0.000 0.000 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 0.286 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 0.000 0.000 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 0.286 7.8408824 13.2290350 5.4437061 9.4980474 2.0399806 11.1722681 1.0399806 NA 8.5477772 7.5021444 NA 8.2720036 2.1554578 10.8540310 9.4099435 1.9144497 6.5264820 9.2559201 8.0952651 10.7513628 9.8009465 7.7053186 10.5700637 2.0399806 8.1221317 9.1990129 3.4994122 NA 10.7864970 0.7769462 11.7752566 12.6589798 7.5318360 9.2510598 7.8059592 9.8257076 3.4994122 0.0399806 -1.5449819 8.5596188 7.9647948 9.4704352 10.8691768 2.6249431 7.8795643 7.2526815 10.0158305 7.5184155 10.1939567 NA 9.4236870 2.6249431 3.4550181 9.7563448 5.3408400 -1.5449819 8.7159397 7.8896481 4.4773859 1.4550181 13.9262825 NA 10.5543679 NA 8.2575363 5.1692676 8.1897297 7.7171150 14.469338 6.415022 8.422246 12.713218 9.232612 9.884427 13.058473 10.961080 9.161516 11.672069 12.478081 10.405576 9.027720 7.683839 4.542481 7.972690 12.619456 11.737240 5.749642 7.954866 9.752510 4.477386 10.979488 5.499415 10.086652 10.446188 6.294224 -1.544982 5.024874 8.703588 11.284148 10.370900 8.191422 10.452553 11.599838 3.584301 11.143303 9.816416 9.809821 10.156327 12.383261 9.717115 11.266997 8.710049 NA 8.868278 3.262373 10.633374 7.172697 10.845458 9.803748 7.306769 13.110383 9.869177 9.572663 11.504188 9.991267 10.354377 NA TCGA-A8-A07O 51 0 NA 304 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 9.8096527 8.9709523 11.7662198 10.1928531 8.4908461 8.2485291 9.4611612 10.6956570 12.8773268 12.5932571 10.2804461 10.3429014 5.5622058 11.4915954 3.4678794 10.0609415 6.0266098 8.5169914 7.4775940 7.4482493 NA 9.4781987 7.2038687 9.1469250 10.8804770 8.2668540 1.2583983 7.7402247 10.3315626 2.1653010 8.6593045 8.0641688 -1.7417826 4.0913190 8.9709523 10.3505216 8.5193445 9.8555466 10.4454679 11.0581115 0.8434211 9.0833839 15.2639072 8.6946995 10.7890753 10.2545455 11.4092831 2.1653010 0.2584586 9.7716593 10.8325456 0.2584586 10.8795613 5.8433885 7.3590871 4.2807930 10.0377342 11.9410906 9.8139729 11.6099166 12.5463539 5.8053208 11.1492594 10.8447841 11.1105645 11.5945132 4.4081752 12.7323845 9.5814799 0.5803385 9.9605979 11.0845764 2.7191615 3.4678794 8.8216216 9.6027211 11.6382096 11.5444053 -0.7415414 5.9237601 11.6702009 11.0879497 9.8864149 8.7432480 1.6417000 2.1742000 1.1018000 -0.0036011 0.5647200 0.0000000 0.5088200 0.0253900 -0.0018014 -0.6044800 1.1009000 3.5071000 0.0056815 0.0041632 0.0062481 0.0062481 0.6142600 0.0167050 -0.0065050 -0.5915600 -0.5797700 0.0287630 -0.5295100 0.6255100 0.0308730 -0.5385500 1.1694000 -0.5440100 0.0063871 0.0345360 0.5613400 -0.0160170 0.0070826 -0.5743700 -0.0060904 -0.5886300 -1.0266000 0.0253900 -0.0018014 0.0030522 0.6540600 0.0139110 -0.6032200 -0.0259010 -0.0230180 0.0120970 0.0397610 0.0041632 0.0225850 0.0062481 0.0062481 -0.0037395 -0.0037395 0.0079175 -0.0065050 0.0073609 -0.5850000 -0.5462300 0.0126550 0.0204830 -0.5634600 0.0431570 -0.0256200 -0.5057700 -0.5440100 0.0047190 -0.0231550 0.0317180 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.562 0.562 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 -0.587 2.088 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.562 0.562 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 -0.587 2.088 0.000 0.000 0.000 0.000 7.0944757 12.4482497 4.1410649 8.7137525 2.9022859 10.4648291 -0.7415414 NA 9.0099691 9.3096341 -0.1566593 8.8768475 2.2584285 11.2844298 8.6214647 2.9022859 3.3028162 10.9660000 5.5622058 10.0166484 8.9015958 6.0332115 10.9527830 1.7178683 9.9040836 9.7147796 1.4283568 NA 10.9181981 8.1007753 12.7664675 12.0936861 7.1070486 9.1585372 8.0512155 9.0149815 1.8433809 2.3458789 -1.7417826 0.5803385 7.7975837 8.6442875 6.2918485 2.1653010 7.5043344 7.5915807 9.7351713 4.9308509 10.7525307 2.9588612 11.8353818 3.4678794 5.0657791 9.9162303 8.8251929 3.6507416 8.1683181 8.3643339 5.3979775 3.5803505 13.4498700 -0.1566593 10.5806350 NA 10.6132255 3.4678794 8.2499468 6.4727444 10.510011 10.689662 8.097629 11.491595 8.604939 11.433663 7.448249 11.499813 9.455027 10.817563 13.354729 13.929109 9.771659 7.482427 6.052842 8.404357 11.594932 10.7617540 6.6291132 9.4507180 9.1015610 9.8827636 10.4230430 5.7341595 6.1039151 10.2804461 10.3747691 0.8434211 6.2752343 10.6228170 12.7405398 11.4330388 7.9215208 9.4401985 9.2548987 5.8508819 9.8710817 8.5193445 9.7607597 10.5333856 12.1539058 11.9543059 11.1952471 10.1924845 NA 9.1118360 4.4482468 10.8795613 5.3458895 11.1309808 10.0377342 8.8734847 15.0021857 10.8339644 10.5952107 13.5299976 10.5158130 9.4926438 -0.7415414 TCGA-A8-A07P 68 0 NA 334 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 2 2 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 4.161568e-07 8.90780431 9.46199545 11.10785784 9.29109839 8.82668449 8.93962593 9.44349912 9.11079126 9.53302422 13.53436943 11.47851179 10.12693092 0.78885273 14.86352314 4.48930529 7.84414584 5.32491499 7.66660749 8.04813590 12.70690647 0.78885273 13.08784218 2.78887360 9.11393460 10.38281443 8.84631341 -0.53303362 11.44260398 9.91039674 0.05185930 7.73137742 6.29348268 0.05185930 3.82448275 9.81344885 10.90987854 11.00682087 10.44743166 10.36402420 11.18503981 4.05189409 10.86460968 14.63144923 7.76252024 10.43524187 11.99159922 10.65212022 3.71486094 6.29982527 9.26864352 10.69274503 -0.53303362 11.22744712 5.36175433 5.56496647 4.95878701 10.18289710 11.37457689 9.54441835 11.23532618 12.53125683 8.30298522 11.06382365 9.23346390 11.05095805 10.29705405 3.92636954 11.77513188 11.40908300 NA 9.83489574 9.04813563 0.06626144 5.78886317 10.00463889 9.42548784 10.11843526 11.25422548 2.63686819 9.31399245 11.34153228 10.37532772 9.77242692 8.92020575 0.0019418 -0.0178410 0.0028264 -0.0248620 -0.0988140 -0.0205490 0.0132130 -0.0056156 -0.8181900 0.8262700 0.7101900 0.8110300 0.0054139 0.0054139 0.0033299 0.0033299 0.0033299 -0.0205490 0.6154400 -0.8114500 0.0052749 0.1015400 0.8079200 2.1875000 3.4543000 -0.0926100 -0.0926100 -0.0926100 0.9356900 -0.8351000 0.0019418 -0.3058000 -0.0360880 -0.0651790 -0.0291950 0.0132130 0.0132130 -0.0056156 -0.8181900 -0.0012473 -0.0023553 0.0023581 -0.8036800 -0.0123000 -0.0123000 -0.7960300 -0.0466390 0.0054139 0.0054139 0.0033299 0.0033299 -0.8052600 -0.8052600 -0.0205490 0.6154400 0.6154400 -0.8003600 0.0052749 0.2665500 -0.8222200 0.8079200 0.7235700 -0.8370400 -0.2098900 -0.0926100 -0.8111200 -0.0022168 0.0866660 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 0.106 8.0798037 12.4230389 3.8244827 9.2243252 1.0519289 10.7933646 1.2742915 NA 8.5235729 8.2532046 -1.5332424 7.5943104 0.7888527 10.7304977 8.5477525 4.0518941 6.3372990 9.3472839 10.2990340 11.6533589 9.3952833 7.2450126 9.8710122 3.2218152 9.4767636 9.5610127 -1.5332424 1.7888527 11.8253116 2.9263600 12.3251104 11.7041450 7.9181465 11.1630332 8.5276310 9.9446933 6.9627896 0.4669664 0.0518593 4.3249186 9.4356019 9.3318951 10.6632299 3.4669403 6.1483139 7.3311212 10.1130437 7.1982545 10.4962223 NA 10.2970540 4.6763859 5.5543985 9.8727201 6.9408844 1.4669142 9.2050274 8.1035595 11.8314802 NA 13.3804790 0.7888527 10.0579898 NA 7.9667811 3.8244827 8.1863238 9.4527770 13.892467 5.724323 8.777548 14.863523 8.919176 10.752048 12.706906 12.104466 8.767288 10.815387 13.098283 10.512354 9.268644 9.187179 -1.533242 8.602644 11.207559 10.6797355 6.7978521 8.7695741 9.1188837 8.7372304 10.1402220 6.3798237 5.4781629 11.4785118 6.6166826 3.1673740 4.6957545 7.0703013 9.7809518 9.9592890 8.8277822 8.7511808 13.3193183 4.8244878 9.8752490 11.0068209 10.5410766 9.5517434 10.8354415 8.7569539 10.6496398 9.5656252 0.0518593 7.8446010 2.5543924 11.2274471 6.8112308 9.7820846 10.1828971 7.2713893 13.5510376 10.0085157 10.4046767 12.3714756 9.5003581 9.3029854 2.5543924 TCGA-A8-A07R 80 0 NA 273 breast stage iiic t2 n3a m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 9.294168e-06 2.288862e-06 9.6359325 9.5628196 11.6670231 9.1262489 8.9536095 9.0201680 8.7822647 10.2408915 11.2978947 12.5893387 10.5824368 10.7709107 0.2636354 12.5226192 2.5855395 8.8783213 3.4335337 8.0933341 9.8653824 4.4924301 1.0709388 10.1854526 8.6730027 8.8993297 11.4689467 4.5115376 -1.7364848 6.8560682 11.0218348 4.9501138 9.7896217 8.7291778 1.7230342 4.7871712 9.5645361 10.3543856 9.5133176 10.7537103 9.6304801 11.3961113 1.4335471 7.1854523 15.5482460 7.0359263 8.9966269 10.8172409 12.4274971 3.2636054 3.0184917 10.4095438 9.4453851 NA 9.9417716 5.6898750 5.5397358 4.7554645 7.5651082 12.1753781 9.8906894 10.6438021 13.0324679 7.6473159 10.5570832 9.6704916 11.5052969 11.9874858 4.3721372 13.5602052 8.3890251 NA 11.0996620 10.1102772 2.7269620 3.7871712 11.3160098 10.9636178 10.9253897 10.3590086 4.0449711 5.0050766 12.7158528 10.3025306 9.7235555 8.8551338 -0.134910 1.403200 1.013300 -0.088374 1.796800 1.017000 -0.123170 2.535000 0.459220 -0.051046 0.995710 1.342200 2.246900 -0.174800 1.265000 0.766380 0.766380 0.539600 0.822200 1.420200 1.375000 2.146800 -0.175250 0.447480 0.447480 -0.206720 0.905330 0.691850 0.212230 -0.139360 -0.134910 0.379730 -0.078949 -0.108280 -0.750280 0.278520 -0.130050 0.606840 0.459220 -0.775750 -0.132120 0.449520 0.000000 0.957950 1.087600 -0.202240 -0.127840 -0.138970 -0.112340 -0.125900 -0.023977 0.250580 0.250580 0.318830 0.822200 -0.160520 -0.139490 -0.112470 -0.143610 -0.091816 -0.175250 0.447480 -0.753310 -0.206720 0.691850 -0.073088 -0.800610 0.568280 0.144 -0.139 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 -0.142 -0.142 0.000 0.874 0.364 -0.128 0.354 0.354 0.144 -0.139 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 -0.142 -0.142 0.000 0.874 0.364 -0.128 0.354 0.354 6.4184295 13.0300888 3.5855395 7.7534595 2.5145768 9.9083692 NA 7.3188943 9.5115392 8.0251628 2.3510629 8.0980826 3.3928944 10.4534362 9.1231463 5.3080040 2.9074676 10.7832478 4.4335337 9.7812810 8.0136487 7.5719506 12.2592904 1.5855395 7.9588398 9.8076101 7.0869790 NA 10.9527360 -0.7364848 12.4727603 12.2107919 7.2970346 10.1591869 12.6925606 11.2618494 5.0050766 -0.7364848 -1.7364848 7.5536308 8.4509638 8.7158529 8.5639642 6.1584299 6.6496902 6.9002365 10.2537156 5.7065554 11.1305042 4.7714050 11.6602164 3.0709732 3.8181961 9.3936286 6.3412813 6.4285193 8.8296657 6.4972307 7.6386509 4.5115376 13.4230494 2.7871817 11.2522963 1.0709388 9.9696759 6.3457601 8.4184299 6.8143582 9.7085851 9.5934079 8.1385928 12.5226192 10.4478671 11.9398993 4.4924301 12.8053737 9.8934235 10.8716354 13.1098365 11.5054458 10.4095438 8.6483953 0.8485578 8.6473159 11.2999569 10.7273914 4.5855395 8.7013636 9.5501694 9.4755000 9.8389711 4.6898750 4.7714050 10.5824368 10.3263324 4.8635222 7.7271363 9.5011204 12.2705513 9.4497258 8.1043896 9.6719414 9.1408957 7.5020163 11.2194050 9.5133176 9.9110700 10.4209586 10.5064880 10.3090299 10.7815270 9.7250910 -0.7364848 9.1720041 7.6793534 9.9417716 5.3825531 10.0229880 7.5651082 8.3866984 13.5355123 10.7778325 11.1561544 13.6308216 10.5162770 9.3986796 1.7230342 TCGA-A8-A07S 73 0 NA 243 breast stage iia t2 n0 m0 female 2009 NA yes mixed histology (please specify) NA NA NA 5 5 2 NA 3 1 1 1 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.451607695 9.805724367 12.143854787 9.775190003 8.437748744 9.771327364 10.799235393 9.451607798 10.484335638 13.268780914 10.659046683 11.578761148 0.005902957 12.819417057 2.880372075 9.756889188 6.432167712 8.138616879 10.886761988 13.396878070 1.420940456 14.278314156 8.819684148 9.707838973 10.575442245 8.341293312 0.005902957 11.493240672 10.391765465 2.420940456 7.195727516 6.169133306 NA 3.590865458 9.627954959 10.409980199 9.869573178 10.896420658 10.074233535 11.446426216 2.121380174 11.256004066 15.030148165 8.786410132 9.484335739 11.967473341 11.556810129 4.064796646 1.228295378 8.356105506 11.430594253 NA 11.329145521 3.121380174 4.912793552 4.960099267 9.980317689 11.843662395 10.267606255 11.778767462 13.021782675 8.605815799 10.806263713 10.447996403 11.069298172 11.428318294 5.035650300 11.692257660 12.825350378 -1.579059544 10.126140963 8.738353070 2.518560317 5.795979887 10.923275111 10.028733236 10.257779934 9.699390088 3.005902957 7.890582273 12.140864081 10.267997919 10.400008434 9.400365865 0.8641400 1.3099000 1.4082000 0.0063871 0.0063871 0.0143650 0.0093098 -0.0100940 -0.8636100 -0.8397800 -0.0091286 0.0068044 0.0037355 -0.0020233 0.0000000 0.0000000 0.0000000 0.0074601 -0.0029091 0.0054477 0.0042387 -0.0146560 -0.0282200 -0.0282200 -0.0252090 -0.0440090 -0.0440090 -0.0440090 -0.0110600 -0.0129510 -0.0041429 -0.0036011 0.0063871 0.0135770 0.0116570 0.0093098 0.0093098 -0.0100940 -0.8240700 -0.8515400 0.0048619 0.0013965 -0.8397800 -0.0011087 -0.0011087 -0.0011087 -0.0011087 0.0136320 0.0120970 0.0000000 0.0000000 0.0000000 0.0000000 -0.0016629 -0.0029091 -0.0029091 0.0069435 0.0042387 0.0081959 -0.8290300 -0.0282200 -0.0282200 0.0113810 -0.0440090 -0.0440090 -0.0110600 -0.0045695 -0.0268180 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.679 -0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.679 -0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 0.000 7.6712389 13.1590856 3.5908655 10.5524760 3.1029436 10.7190031 -0.5790595 NA 8.6795065 7.5136976 NA 6.5915164 NA 10.3561056 9.0719921 0.4209405 4.9127936 8.6352596 9.2843524 9.2936153 9.9360490 8.0096551 10.9659050 3.4653346 9.8046449 9.7850753 1.0059030 -1.5790595 10.3093033 1.5908655 12.7300616 12.3177460 7.2632908 9.5340316 8.7773924 9.2617184 3.1213802 1.0059030 -1.5790595 3.6303938 8.5946176 10.2125105 9.4293693 2.3278311 7.9840413 5.5908655 10.3104445 10.0434500 9.7646815 NA 12.3397107 1.4209405 5.2153563 9.5026636 5.6413668 -0.5790595 9.5732255 7.6033348 4.4870296 1.8803721 13.7060538 0.7428686 10.4950820 NA 9.5508676 4.9127936 7.7109593 8.7729839 13.116512 5.339804 8.533380 12.819417 10.177914 11.326516 13.396878 13.074178 9.218602 10.885486 13.004317 9.597114 8.356106 10.712687 2.327831 7.064797 11.598983 10.9685582 8.9474397 8.8196841 9.0245668 9.2768602 10.0311211 5.8132579 7.4349609 10.6590467 4.0059030 NA 7.8638840 7.0918447 9.9400854 8.9277439 9.1863923 8.8132579 11.8711208 3.2282954 11.0084907 9.8695732 10.1916045 9.8154033 10.0584711 9.4356586 10.5952421 9.3693077 NA 9.4312868 2.8132579 11.3291455 11.3131039 10.6062465 9.9803177 7.4735085 13.9227156 10.3623550 10.4802850 13.4516939 9.6753788 9.4646515 0.7428686 TCGA-A8-A07U 66 0 NA 760 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 4.508365e-07 3.121176e-07 9.7947973 9.4418457 11.5390844 9.7303716 7.8601981 9.2218019 8.5771607 10.5236856 11.7374860 14.1434338 10.7032893 10.7999845 0.2627939 12.6606190 3.2627639 9.8866475 6.7810908 8.5217245 8.1310745 7.3747709 NA 10.8808457 8.7371479 9.1040682 10.1998946 8.0506687 -1.3222888 10.7259499 10.8555346 1.2627939 9.0342556 7.8477289 NA 7.3537608 9.7098493 11.2700270 9.6622221 9.8218245 9.2514507 11.6721570 2.5846980 6.7276523 14.9667237 7.9316511 8.9952162 11.1459185 10.6629339 4.4057269 NA 9.5764050 9.9357806 NA 10.8067645 6.3643045 7.9929531 5.7546203 9.6579431 11.6339982 9.8458488 11.1066871 12.6701224 6.3502285 11.0898441 10.2666260 11.1598552 11.5458544 4.9815833 12.1030195 7.2998555 -0.3221084 10.7807635 9.5083187 4.0036922 6.6026157 9.9304690 10.0154255 10.5642623 10.1841112 -1.3222888 8.1040682 12.6279038 11.9812990 10.1560677 9.6070619 -0.045600 1.070800 0.268480 -0.043296 0.338240 -0.086528 0.321450 0.192570 -0.035686 -0.066217 -0.066217 0.894120 1.353900 -0.062382 0.031613 0.031613 0.031613 0.710250 -0.042618 -0.056674 -0.038249 0.128520 -0.063207 -0.063207 -0.063207 -0.081438 1.063900 1.496800 0.123620 -0.045600 -0.045600 -0.243720 -0.043296 -0.057889 -0.086528 -0.157970 -0.157970 0.192570 0.192570 -0.059402 0.147750 0.139940 -0.080369 0.334200 0.334200 -0.046277 -0.197200 -0.062382 -0.061386 -0.248090 0.031613 0.031613 0.031613 0.726640 0.079002 0.118470 -0.050336 -0.038249 -0.254640 0.197360 -0.063207 -0.063207 -0.052767 -0.094076 -0.078510 0.123620 0.150280 0.460630 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.120 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 0.000 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.120 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 0.000 9.7459101 12.2706110 3.2627639 9.0154254 5.8367674 10.3847312 5.1535378 7.2739932 8.8811516 9.0364547 -1.3222888 7.6766757 5.4722181 10.8395654 9.1954729 2.6778014 9.3440275 9.0131940 7.6946121 8.4867679 9.3747102 6.9724238 11.1024948 3.4326922 8.8969720 10.1816293 3.4326922 NA 10.6159129 1.6778014 12.3224485 12.5250567 8.5558545 9.6312726 11.5140512 11.1870837 6.0786824 2.3782342 0.2627939 -1.3222888 8.4360269 9.8608187 6.7599521 5.0176547 8.1696364 5.9539287 9.8527292 3.9632059 9.4217964 1.8477164 10.6309088 3.8477264 4.3216612 9.5748926 5.7112278 9.2814300 10.0031090 9.7180932 10.8796212 6.9492664 13.0437842 -1.3222888 11.7079534 NA 10.1382595 5.4722181 7.8799275 7.6693252 11.492524 10.081881 8.215022 12.660619 9.934602 10.694960 7.374771 9.647190 8.945761 11.429138 14.028363 11.467337 9.576405 7.799337 2.925734 7.281430 11.417373 11.0081603 5.7330858 8.4293477 9.5154316 8.9781562 9.0746866 8.7745186 7.5106938 10.7032893 10.2674547 0.2627939 8.6188513 9.9922283 11.9025590 11.1152956 7.8460996 8.1555620 10.1072103 10.6392532 10.4181873 9.6622221 10.2842088 9.5573869 11.2450467 9.7646033 10.8990886 9.1656437 NA 9.7980674 11.0056369 10.8067645 6.1207480 9.9867114 9.6579431 7.9678222 13.1725342 10.2256621 10.5846942 12.8149548 10.4360268 8.7758358 6.2851340 TCGA-A8-A07W 76 0 NA 304 breast stage iv t2 nx m1 female 2009 NA no infiltrating ductal carcinoma NA NA NA 3 3 1 NA 1 5 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.907385e-06 6.589149e-07 9.7629349 10.1143217 11.8711688 10.2466270 9.0732070 8.3433168 9.4142440 10.1242145 8.6937587 14.7791686 11.5226223 11.2339292 0.6680283 12.6363003 3.3461343 9.1502685 4.9899927 9.0431050 6.7512789 12.7198862 -1.6538090 12.9138559 -1.6538090 9.2805212 11.9975255 5.5940648 0.9310779 10.1845536 11.2644417 2.1534811 8.2165019 7.1307723 7.5725494 3.7036877 9.6815278 10.6945889 9.0185627 10.3829979 10.0070247 11.5913930 6.1978870 10.2507720 15.1526241 9.0217240 9.7660977 11.3326906 11.8297013 4.2041172 5.8852961 9.6954187 10.9318042 -1.6538090 10.7069845 5.2287802 5.9385940 4.9899927 10.0642421 11.5863325 9.9502272 11.1110090 12.5758575 8.9348520 10.6020512 9.9828571 10.5104159 11.4494252 5.1534933 11.7642536 9.7713533 NA 10.4866477 10.9067091 2.0410327 5.9159941 10.6097001 10.3090335 10.5088435 11.6381714 3.8379937 6.1143212 12.3183993 10.7257866 10.5907986 9.2849818 -0.0127130 0.7305700 0.7604400 -0.0296530 0.5870400 0.1319500 0.8251000 0.2535500 -0.5303200 2.9461000 2.1843000 3.6569000 -0.0136190 -0.0224890 0.2459100 3.6569000 -0.2839400 -0.0098185 0.5973200 -0.1689100 2.2056000 0.0000000 1.2887000 0.2373600 0.8465200 -0.1863000 0.0279190 0.1439100 1.6105000 -0.0127130 -0.0127130 -0.1084100 -0.0919560 0.2039600 -0.1747400 0.5334600 0.2354600 0.2535500 -0.5303200 -0.2913000 -0.0843860 0.1995900 -0.9025900 -0.2678300 -0.2678300 -0.2678300 -0.0306770 -0.0224890 -0.0318130 0.0774300 -0.2888100 -0.3058400 -0.3058400 -0.0098185 0.5805900 0.5805900 -0.1689100 -0.3810000 0.7991700 0.5861400 -0.6957800 0.8573900 -0.1191300 -0.1863000 0.1439100 0.1374600 0.1949700 -0.4538300 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.208 0.000 0.000 0.134 -0.903 3.657 -0.237 0.000 0.169 0.169 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.208 0.000 0.000 0.134 -0.903 3.657 -0.237 0.000 0.169 0.169 8.9301604 13.6855699 7.2886520 9.5665157 4.8696987 11.0571590 -1.6538090 NA 8.5543717 7.4122269 NA 8.4287521 1.3461343 10.3726608 8.7523425 4.3685030 4.7555286 9.1931949 10.4425232 10.1014423 9.8970044 7.5964358 10.6801313 2.7384652 9.1679113 9.0335130 0.9310779 -1.6538090 11.3266341 0.9310779 11.9831018 12.4241214 6.4229528 10.2934091 8.0431050 9.3918970 6.1663158 1.5160656 -0.6538090 8.2871851 8.1242144 9.1502685 9.5322517 2.8696938 7.7345850 7.0943300 10.4850492 6.5653062 10.1336320 NA 9.5555907 4.8055711 3.0465784 9.1542490 6.3593771 2.8055607 9.0833847 9.1877017 5.4546629 1.1534811 13.5862207 NA 11.0878151 NA 6.0603825 3.9899927 8.1324072 8.8578902 16.1832891 5.6770543 9.0025622 12.6363003 9.6051274 10.6456317 12.7198862 12.4383165 8.5761578 11.0770321 12.5811793 9.3698917 9.6954187 9.0352618 0.6680283 7.9235664 12.3429640 10.8831131 8.8228837 8.8409931 9.6280675 10.3479994 10.2106640 6.8137427 9.7655710 11.5226223 7.8137427 1.9311157 9.7211768 9.5258040 11.0441910 9.6158486 7.9497637 9.2226544 12.3643376 5.0043486 10.5723599 9.0185627 9.8359853 9.8178127 10.8504599 9.5916901 10.8354837 9.3712770 1.6680737 8.8739663 4.5160593 10.7069845 7.4202786 10.2941396 10.0642421 8.2103236 12.8039672 10.4226190 9.6590205 12.2266776 10.2842468 9.7744977 0.9310779 TCGA-A8-A07Z 85 0 NA 1371 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 5 3 NA 3 1 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4.508365e-07 1.733986e-07 8.73626188 9.23091941 11.52617863 8.89357396 8.45651007 8.48646339 10.69538247 10.08649838 10.56576547 14.79306818 9.35192112 10.68465606 -0.02532386 12.84777023 1.29666297 8.19629770 6.36702852 7.22737624 10.20292810 13.21281684 0.55963864 14.78402665 1.97471285 9.61661794 10.48646339 6.98593754 1.55968759 8.96481476 10.05152627 -1.02532386 8.70772597 6.45044422 NA 2.67516104 9.91722527 10.20533166 9.10270510 12.36635705 9.48250527 10.41454159 1.29666297 11.81194439 14.96795870 5.59059903 9.18172500 10.98488907 10.61676238 4.33226396 1.78207302 8.15213017 11.74640649 NA 10.52305094 4.40097504 3.78206253 5.60406836 10.01500044 11.51822589 10.37078024 11.81902414 12.04634065 8.89208284 10.38144713 9.98033526 10.51532305 10.96906413 5.72959899 10.82685002 12.09072970 -0.02532386 11.31149619 8.52737965 2.15104699 4.33226396 10.67037397 9.34103284 10.56108141 8.71786215 0.97467614 4.58942194 11.63604344 10.56810186 10.94193695 9.24850637 -0.0305500 1.6422000 1.6805000 -0.0054097 -0.0054097 0.0000000 1.1138000 -0.0342330 0.0016935 -0.0177160 -0.0177160 -0.0111060 0.5728900 0.5954500 -0.0378750 -0.0378750 -0.0378750 1.0589000 1.0589000 -0.0512820 -0.0078967 -0.0478110 -0.0840070 -0.0840070 0.4151700 -0.0943380 -0.0943380 0.6693600 1.5846000 -0.0305500 -0.0305500 -0.0380440 -0.0054097 -0.0638480 0.0136210 1.1138000 1.1138000 -0.0404030 0.0016935 -0.0313690 -0.0238500 0.8429800 -0.0415580 0.9936200 0.9936200 0.9936200 0.9936200 0.5877400 0.5877400 -0.0378750 -0.0378750 -0.0239870 -0.0421200 1.0589000 1.0597000 1.0597000 -0.0071910 -0.0370570 -0.0469990 -0.0590100 -0.0840070 -0.0840070 -0.0285860 -0.0943380 0.6693600 1.5846000 1.6792000 -0.0886490 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.642 1.585 1.585 1.566 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.994 0.994 0.330 0.330 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.642 1.585 1.585 1.566 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.994 0.994 0.330 0.330 7.4300377 12.5368338 3.4982764 9.8256788 1.1794474 10.7699386 2.1446338 NA 9.3872805 8.5331315 NA 5.3841016 2.2966336 10.0568597 8.7511437 3.8816059 5.5445658 9.0621735 7.3234385 11.0661460 9.7562753 6.3755903 10.7523770 1.9747128 9.1231874 10.1890299 2.6751610 0.5596386 10.6642720 -1.0253239 12.2793472 11.9962112 6.6889566 9.7245802 9.6022446 9.9142899 1.9747128 0.5596386 NA 6.3755903 9.4331174 10.6742831 8.4009755 1.7820730 5.8349286 8.9069255 10.1389891 5.0621735 9.9491253 NA 12.6545206 2.5596631 3.4982764 9.6902610 7.8674962 2.1446338 9.2670324 7.2226384 5.0191059 2.9747128 13.5890755 1.5596876 10.9347126 NA 7.9113488 4.7560679 7.4217939 9.2943827 13.5254148 6.1446358 8.2368054 12.8477702 9.5359987 11.2038299 13.2128168 12.4896712 8.4565101 10.6122413 12.7314755 8.9803353 8.1521302 9.2391534 0.9746761 7.1295293 11.5528475 11.289294 7.269331 8.605888 9.538860 8.374715 10.923939 6.762613 8.724580 9.351921 7.826460 -1.025324 10.485475 9.077579 8.864975 10.210127 9.003998 9.272773 12.305067 4.857354 9.176981 9.102705 11.077671 10.025240 12.538979 10.301140 11.053195 8.917225 NA 9.614829 3.434148 10.523051 4.222635 11.223406 10.015000 7.124457 12.779749 10.821768 9.841217 12.305768 9.969064 9.315674 1.296663 TCGA-A8-A081 80 0 NA 0 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 6 3 1 NA 1 5 1 2 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.011424e-06 4.855162e-07 10.1163609 9.5672861 11.7582146 10.4597620 8.8043702 9.7461408 9.4255229 9.7245715 9.1224325 14.1025628 11.4694539 10.7073950 5.9273821 13.8713986 4.6268713 7.6268720 4.2067604 8.6230705 8.9951258 13.0996590 2.3049490 12.9027515 1.8643744 9.2275924 10.7766192 7.2664699 -1.9428617 11.7568718 11.8284027 0.8643347 8.1824301 5.4748676 -1.9428617 4.6569311 10.8373511 11.2585278 9.7426412 10.1759574 10.1112815 11.7023371 13.6270500 11.3616529 14.3948822 8.4053351 9.4498490 11.3173479 12.4208774 5.4916447 8.5707441 9.7250150 10.3797896 NA 10.5033243 5.1014106 6.9118845 5.1655422 10.6733355 11.9833124 9.1464668 11.0357269 13.2285060 8.5458607 10.8404240 10.2605785 11.3463149 10.7496319 5.7080686 12.9932402 10.8276803 -0.3580841 10.0367988 8.7849368 3.1912310 5.3607962 10.6959048 10.2517733 10.1917636 10.6790683 0.6420084 7.7626485 12.1672550 10.5357861 10.5307222 8.5020314 -0.486600 0.057927 0.600240 0.052155 1.765100 -0.488580 -0.484610 -0.467920 -0.432150 3.656900 -1.064100 0.643580 -1.079600 0.078571 0.085065 2.040700 -0.500900 0.614970 0.614970 -0.495490 -0.375680 -0.490370 -0.530330 0.775390 0.775390 -0.088120 -0.088120 -0.088120 1.072500 -0.518770 -0.486600 0.019212 0.052155 -0.517540 -0.481870 -0.484610 -0.484610 -0.467920 0.378070 -0.467070 0.041730 0.041730 -1.073900 -1.064800 -1.060900 0.062211 0.062211 0.078571 -0.027421 0.069379 0.361810 -0.500900 -0.500900 0.614970 -0.501530 0.019212 -0.490160 -0.390360 -0.477330 -0.547350 -0.530330 0.775390 -0.405620 -0.088120 -0.088120 0.778470 0.184330 0.023976 0.000 0.000 0.000 -0.499 0.596 0.000 -0.490 -0.390 -0.478 0.105 -0.478 -0.530 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.184 0.000 0.589 0.589 0.630 0.630 -0.489 -0.489 -0.485 -0.485 -0.419 -0.419 0.000 0.000 -1.074 0.557 -1.061 0.000 0.000 0.000 0.000 0.000 0.000 -0.499 0.596 0.000 -0.490 -0.390 -0.478 0.105 -0.478 -0.530 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.184 0.000 0.589 0.589 0.630 0.630 -0.489 -0.489 -0.485 -0.485 -0.419 -0.419 0.000 0.000 -1.074 0.557 -1.061 0.000 0.000 0.000 8.7746929 10.4325989 0.8643347 9.6822687 5.8203628 10.3412622 2.8119025 NA 8.7522448 3.9396591 NA 8.5093502 -0.3580841 10.7375957 9.2948238 6.3144047 8.5776350 9.8210587 10.6943205 9.3354658 9.7517138 8.4780294 9.4520149 2.0569996 10.4285208 9.6130433 1.3789555 -0.9428617 11.0534899 2.2269400 12.0644817 12.3079809 6.7539842 11.1791973 8.3630782 9.6499405 6.4493336 3.3049490 -0.9428617 9.0703391 9.1830756 9.6532062 12.4915143 2.8643744 9.2558175 7.0849221 10.2288187 7.7223526 9.6513409 NA 7.8579163 4.2067604 5.6643463 9.6207990 6.5368378 6.6039111 8.6249723 9.1785498 8.6763192 -0.9428617 13.5216898 -0.9428617 10.0759120 -1.9428617 9.3090904 3.4493369 8.6790683 9.1384999 15.0435453 6.2566880 9.2400314 13.8713986 9.9672843 11.2629623 13.0996590 11.5919272 8.6202125 11.5759043 12.1508466 7.4255231 9.7250150 6.9995310 -0.3580841 8.2858350 11.4071268 10.9755070 6.8835646 8.7232404 8.8859462 10.5400764 10.9622887 7.0199120 5.1862985 11.4694539 6.9818287 -1.9428617 8.8707975 7.9752089 11.0173804 10.3073148 8.8048570 8.9518343 12.2159416 8.0793840 11.2696405 9.7426412 10.3530723 10.4955484 11.0247830 8.0570164 10.8974009 8.9980640 0.3789555 8.8315483 7.8285059 10.5033243 4.5327471 10.0879938 10.6733355 7.6000482 12.6228325 9.9250673 10.1895161 13.0956782 10.6983908 9.8119038 2.5805797 TCGA-A8-A082 58 0 NA -31 breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 1 5 NA 3 5 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 10.2588016 9.9454438 12.1360940 10.4038642 7.8379432 8.5759174 10.7940909 9.7983098 10.4830096 14.3226887 11.7450020 10.8626374 1.0000000 12.3018391 2.6780719 9.5690961 5.2927817 7.8529976 8.2384047 12.7904300 0.6780719 14.0843766 0.6780719 10.3510762 10.8360504 7.5453506 -1.3219281 9.5827065 9.8728288 3.7224660 8.3905989 7.4594316 3.8073549 4.2630344 9.8195405 10.4773535 9.7628803 12.5483403 10.1517777 11.8551799 9.1282522 11.9654957 14.9719566 8.3140802 9.9507017 12.1184220 11.2998949 4.8678965 6.1456775 8.9436870 10.7628803 0.2630344 10.4994473 4.9818527 5.1538053 4.3219281 10.3566720 12.0829474 10.3500552 11.1525384 12.8907203 8.0356239 10.8838652 10.2565012 10.8385737 11.7019995 5.2172307 10.8486229 12.7382612 0.2630344 10.2592725 9.5857137 3.0007212 5.9541963 10.6596392 10.8558029 10.5853382 9.7807038 1.0000000 10.5898384 11.7890445 11.7548875 10.2914010 9.5282587 0.01080600 -0.00630980 -0.00630980 0.00000000 0.00000000 -0.00719580 0.00027728 -0.83009000 -0.84131000 3.65690000 3.65690000 0.80442000 -0.00056779 -0.00180140 0.80675000 3.65690000 -0.83793000 0.00305220 0.00305220 -0.01174900 0.01712400 0.00966470 0.01056400 0.01056400 0.01056400 -0.00885260 -0.00885260 -0.00885260 0.00944910 0.01391100 0.01080600 -0.00719580 0.00000000 -0.00719580 -0.00719580 0.00027728 0.00027728 -0.83009000 -0.85005000 -0.00443120 0.01391100 0.00447920 -0.84483000 -0.00595220 -0.00595220 -0.00595220 -0.00595220 -0.00180140 -0.00511310 0.80675000 -0.82513000 -0.83793000 -0.83793000 0.00305220 0.00305220 0.00305220 -0.00429290 0.01375700 0.02230400 0.01894300 0.01056400 0.01056400 0.00402430 -0.00885260 -0.00885260 -0.78707000 0.00569190 0.00485790 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 0.000 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 0.000 8.5652925 13.4862820 8.6205864 10.9983084 5.1375035 10.3196721 -1.3219281 NA 8.3715589 9.5407093 2.2630344 6.8224752 1.8479969 9.7675224 9.1466959 1.4854268 4.7655347 8.8034854 10.9280742 9.3101583 9.4670593 8.6220518 10.7455063 4.5360529 9.9194593 9.6617781 -1.3219281 NA 10.6183855 4.0356239 12.5765788 11.8192211 7.3819755 10.1644042 8.0443941 9.4536822 6.1779178 2.2630344 0.2630344 2.2630344 9.0895829 9.6395216 9.0443941 0.2630344 8.8720777 6.8579810 10.5747827 9.1927860 9.3219281 NA 7.2249664 4.2016339 3.8479969 8.8368457 7.3751785 NA 8.4195389 8.1415963 7.7734689 -1.3219281 13.3660490 -0.3219281 10.7625481 NA 7.9795681 3.9259994 7.8654240 8.7224660 17.904351 6.161888 8.217231 12.301839 10.414698 10.275193 12.790430 12.378295 8.357552 10.684398 12.001690 10.439623 8.943687 7.104337 1.678072 6.426265 12.261390 10.9212459 7.3957483 8.6146951 8.9212459 9.8354188 10.0051249 7.0312187 7.9092931 11.7450020 6.5728897 -1.3219281 10.6355368 8.5456904 11.1069555 9.1074786 9.5751610 9.6532034 12.1549447 1.0000000 10.2182775 9.7628803 10.1644042 9.0938137 12.1313425 10.3636967 10.7248549 9.1689228 -1.3219281 8.9239930 0.2630344 10.4994473 5.9909549 10.4594316 10.3566720 7.4296160 13.8163837 10.3522642 8.8579810 12.0902448 10.3527056 9.8442350 1.6780719 TCGA-A8-A083 67 0 NA 0 breast stage iib t3 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 5 5 2 NA 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 0 10.3192909 10.0356382 11.8027052 9.5196874 8.6030002 9.4787828 10.8293109 9.1472380 9.0947459 13.7027405 11.2099597 10.3341717 6.0209266 13.2554655 2.9131288 8.5227471 4.8495590 8.1239196 10.8919809 13.5252602 1.0551262 15.1486932 7.1558039 10.1847143 10.6169068 6.1844251 NA 10.6677797 10.7070902 NA 8.9961893 5.0775079 NA 2.7555713 9.6207196 9.7235833 11.8174198 11.3187042 10.1636660 10.3042550 4.0775079 11.4573543 14.1024998 8.8310893 10.1465736 12.1900491 11.2730993 2.1426095 9.1406141 8.6116475 12.1322076 -0.3599344 10.9318503 3.4814023 2.3030793 3.3030647 9.9843999 11.9446455 10.8158615 11.0291976 13.0051506 8.5688693 10.6730681 10.3558373 11.4593518 11.0102465 5.2048880 11.0956025 10.2866628 NA 10.3457364 8.9416002 4.2115807 3.1844231 10.7860362 10.2730993 9.9657843 9.2023465 1.8625109 8.8745222 12.4954917 10.8810941 10.1002186 9.7003497 3.4428e-03 8.1978e-01 8.1978e-01 6.2221e-03 0.0000e+00 6.9175e-03 8.1217e-01 8.5875e-03 8.5875e-03 -4.8719e-03 -4.8719e-03 -4.8719e-03 2.0546e-03 2.0546e-03 -5.1485e-03 -5.1485e-03 -5.1485e-03 -8.5745e-04 -8.5745e-04 -9.9602e-04 -8.5745e-04 2.8874e-03 -2.5861e-05 -2.5861e-05 -2.5861e-05 3.4428e-03 3.4428e-03 3.4428e-03 7.8973e-01 3.4428e-03 3.4428e-03 -5.8029e-04 0.0000e+00 6.9175e-03 -3.0213e-03 8.1217e-01 8.1217e-01 8.5875e-03 8.5875e-03 8.5875e-03 -7.0834e-03 -8.4444e-01 -2.1042e-03 2.5141e-04 2.5141e-04 2.5141e-04 -6.3765e-03 2.0546e-03 2.0546e-03 -5.1485e-03 -5.1485e-03 -5.1485e-03 -5.1485e-03 -8.5745e-04 -8.5745e-04 -8.5745e-04 -9.9602e-04 -8.5745e-04 -1.3838e-03 -8.6642e-01 -2.5861e-05 -2.5861e-05 -6.2544e-03 3.4428e-03 3.4428e-03 7.8570e-01 -6.6689e-03 -4.8719e-03 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 0.000 6.39053184 11.01333175 3.09953086 9.68085036 1.79605778 10.70888230 -0.35993442 NA 7.64759873 8.43560276 NA 4.94995974 3.78305847 10.46876953 9.46187803 -0.35993442 3.44746018 8.96653343 10.36944151 10.75623139 9.73622179 7.85604138 10.35119743 2.57869724 8.91001005 9.62024366 4.03241827 NA 10.48376349 1.86251090 13.41482250 12.10957630 6.38605906 10.44557929 11.16578798 9.40608082 NA 0.86251090 -1.94508208 10.05514155 9.44906815 10.52019769 10.25051374 2.69899630 7.42340757 6.34516038 10.22130460 4.93778693 9.73945187 NA 11.66985139 2.64011187 3.66985449 8.67867548 4.96154925 -0.94480435 9.70034972 6.78306240 6.75210898 NA 14.05441491 0.05519565 9.96465970 NA 7.84793178 4.68449898 7.03813544 8.13994983 13.78435707 4.09953928 8.56985561 13.25546547 10.42310225 10.74732110 13.52526020 12.58219087 9.45233495 10.49627019 12.93959829 8.47193894 8.61164749 8.34516038 0.05519565 8.11177939 11.09491739 11.203300 9.661084 8.932426 8.979212 7.999122 10.073067 4.640106 8.432352 11.209960 4.769386 NA 6.184425 6.429834 8.122576 9.891586 9.781785 8.581641 12.985879 2.142609 12.219594 11.817420 10.519943 9.889613 11.661200 8.727567 10.694256 9.298316 NA 9.815371 1.055126 10.931850 4.546993 10.433978 9.984400 6.901509 13.856218 10.422010 10.642685 12.818250 9.847932 9.901415 -1.945082 TCGA-A8-A084 81 0 NA 458 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 6 3 3 NA 2 4 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 1.664627e-06 2.774378e-07 10.289413 9.523477 12.077146 9.771524 7.771524 9.865431 11.118011 9.918283 11.108692 13.604683 10.872889 10.728436 2.436775 12.479311 2.716881 9.268758 6.129262 8.545297 10.892980 13.209911 NA 13.466454 8.080628 9.105151 11.019855 8.589419 0.951364 8.055682 10.470588 2.088854 8.505934 6.924038 1.436748 3.088854 10.686394 10.266042 9.250553 11.875118 10.198798 11.949230 9.050430 11.280469 15.235432 8.967652 10.266037 11.163963 10.817079 3.273277 4.779165 8.338501 12.482824 NA 10.836126 4.357341 4.877347 4.512063 10.485843 12.257521 10.229795 11.912216 13.087952 8.296529 10.163234 9.613259 11.754346 11.341084 3.914823 12.097023 9.467045 -1.370713 10.280917 9.038808 3.490878 4.799341 8.260594 10.378868 10.043574 9.588695 0.951364 10.150036 13.251126 11.501322 10.038808 9.866029 -0.3905100 0.9043200 2.0999000 0.9279700 0.0288200 -0.4487800 -0.4159700 0.0280290 1.7125000 -0.0952520 -0.0952520 -0.0952520 -0.4191500 -0.0910230 0.0448570 0.0306920 0.0306920 0.0291330 0.0130740 0.0044411 0.0332670 -0.8682300 -0.8534500 -0.8534500 -0.8534500 0.0045800 0.0045800 -0.0393940 0.0891270 -0.3905100 -0.3905100 -0.0045695 0.0493980 -0.4250600 -0.4487800 -0.4159700 -0.4223300 0.0280290 0.0221990 0.0063871 0.0052749 0.0000000 -0.3441600 0.0181030 0.0181030 0.0181030 0.0181030 -0.4453900 -0.4523700 0.0448570 0.0306920 0.0306920 0.0535210 0.0291330 0.0329860 0.0558750 0.0044411 0.0332670 -0.3929700 -0.7250900 -0.8534500 -0.8534500 -0.9207700 0.0045800 -0.0588570 0.0774300 0.0115180 -0.2562400 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.256 0.000 0.000 0.000 0.000 -0.449 -0.449 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 -0.265 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.256 0.000 0.000 0.000 0.000 -0.449 -0.449 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 -0.265 8.2624125 13.8821565 4.5363078 10.0666491 2.3298699 11.4154826 -0.3705268 NA 8.7778937 8.4367723 NA 8.0161202 4.1529784 10.7460861 9.3759315 -0.3705268 5.5601555 8.6223557 10.7628805 10.3302904 9.6791500 7.7842350 9.9603340 1.4367482 7.1763118 9.9303417 0.6293799 -0.3705268 10.0393384 2.3298699 11.8854784 12.0614370 7.2624125 10.1377072 11.5419324 9.0847444 6.6237703 0.9513640 0.9513640 3.9513453 8.5512580 9.6427398 10.9394619 0.9513640 9.9558017 7.2876284 9.4238330 6.3505167 9.3115340 NA 12.3982218 3.2732772 3.3298555 9.6198757 6.3245064 0.9513640 9.7215136 6.8582359 4.7586976 1.7993360 13.6253610 -1.3707133 10.0960035 NA 5.9055410 3.5363016 8.0577773 7.6009610 13.2219385 6.3708844 7.8266336 12.4793109 10.4760829 11.5156854 13.2099113 11.4660594 8.9953460 10.7993422 13.0687936 7.1252719 8.3385011 7.7817020 -0.3705268 5.7483593 12.3102162 11.3049332 8.5616320 9.0066276 9.1685761 8.4827269 11.0265303 4.9513453 8.3725687 10.8728888 6.0723610 0.2143735 6.0044564 8.9381317 10.4551710 11.0777917 8.3725687 9.4222076 11.5874261 3.4873963 11.3461595 9.2505533 10.7218440 9.9360485 11.4581488 9.5280186 10.8609384 9.3641268 0.6293799 9.9675463 2.9513453 10.8361264 7.5332994 10.6697069 10.4858427 7.3367761 12.6005116 10.0302966 10.7823357 12.2183660 10.8582359 10.0179727 -0.3705268 TCGA-A8-A085 44 0 NA 1124 breast stage iib t2 n1a m0 male 2008 NA no infiltrating ductal carcinoma NA NA NA 3 1 1 NA 3 5 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 4.855162e-07 10.57970004 9.94239677 12.23900125 9.77888386 9.09914316 8.98811175 10.85129516 9.76732159 9.48429425 14.62219337 10.67794343 10.91862394 0.27381424 13.10287547 3.83457976 8.12686396 4.92921816 8.64803647 9.21755330 13.08744713 -0.04811385 13.98944228 -0.46315135 9.14147877 10.47255692 6.23734000 -0.04811385 7.03142277 9.60298997 1.41137201 7.81147296 7.34640115 NA 5.91194080 9.25799992 10.53266791 9.54905958 11.84912193 10.08475923 11.42018041 1.85881652 12.57576258 14.61224060 8.08976189 9.83113858 10.81612439 11.29706620 4.37820641 4.77211791 9.01802738 10.50340618 -1.04811385 11.31894336 5.16139192 2.70681785 5.62436414 8.97499958 11.92787576 9.83953970 11.90813284 12.69240416 8.30066646 11.07298604 10.66618378 11.03691263 11.41852456 5.19034226 12.74919444 13.36880172 2.27387391 9.64673132 8.79350252 3.12985998 2.99633451 10.20903134 9.61771833 11.30880283 10.30618761 2.03938409 10.70745180 10.93849135 10.53924694 9.88304508 9.60657418 -0.0018181 -0.0018181 0.7786600 -0.0020950 0.1451600 0.0047022 0.0134760 -0.0028613 -0.8560000 0.0072050 0.0072050 0.8254600 -0.0011254 0.0040654 0.0161290 0.7472500 0.0148720 -0.8648500 -0.0026489 -0.8503700 0.0158500 0.8087500 -0.8796200 -0.0506570 2.7660000 1.3223000 -0.0697500 -0.0697500 0.8174500 -0.0666700 -0.0018181 0.0164090 -0.0020950 -0.8796400 0.8180300 0.0134760 0.0134760 -0.0028613 0.0052581 -0.0196050 0.0123590 0.0083183 -0.8518700 -0.0153450 -0.0153450 -0.0045862 -0.0163080 0.0040654 0.0187860 -0.8599600 0.0161290 -0.8502800 0.0338140 -0.8648500 -0.0096972 -0.0096972 -0.8384200 -0.8620300 0.0027578 -0.8755700 -0.8796200 0.7096200 -0.8775200 -0.9130500 -0.0697500 0.0000000 -0.0022335 -0.8793900 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 -1.293 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 -1.293 7.6083628 13.4570054 2.1998765 9.1698959 3.6378768 11.0365805 0.9519607 NA 8.7487889 8.1318472 -1.0481139 7.6239217 4.3094891 10.3839580 10.0760596 3.0394016 5.9292182 9.6225946 11.5568389 10.8847067 8.8652390 7.7911420 11.8634238 0.2738142 9.7155657 9.6322977 0.7593263 NA 10.9363567 3.3782064 12.1028755 12.1429203 7.2940132 10.0695813 7.1193562 9.6114882 3.4755000 0.9519607 -2.0481139 NA 8.5065270 9.0624215 10.4988327 2.5957901 8.8361851 6.4317182 9.6900305 7.7528382 10.6190498 NA 12.6881816 1.7592837 4.4910963 9.3477562 6.8367498 -2.0481139 9.0024671 8.0552260 2.2738739 -2.0481139 13.3474054 1.4113720 11.0465108 NA 9.0139845 5.0812203 8.1565094 5.8467566 14.487894 6.365567 8.445794 13.102875 9.225151 10.386045 13.087447 14.077029 8.990116 10.282855 11.926174 11.424121 9.018027 9.251146 2.273874 8.391769 12.120062 11.183009 7.034087 8.997015 6.415463 9.791142 10.845786 4.291788 4.595796 10.677943 6.813026 -1.048114 4.081220 8.218385 10.574219 9.325347 7.271362 8.648036 15.107913 -2.048114 12.713686 9.549060 9.415463 9.884522 9.171712 9.795859 10.787397 8.833817 NA 8.649280 2.039384 11.318943 7.940623 10.823266 8.975000 7.551851 13.327894 10.600071 9.529367 12.276189 10.012634 10.314978 -2.048114 TCGA-A8-A086 59 0 NA 396 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 3 1 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 10.77762486 10.36267305 11.52247968 9.67849275 9.26967770 8.72505297 9.87374908 9.38543600 9.26015013 12.97538975 11.67863033 10.24870750 -1.67807191 12.07337565 3.99446206 10.27040805 5.66189208 8.29502042 8.28493697 12.22723976 3.22892641 13.37052768 2.32204351 9.12214802 11.10810616 3.36643413 -1.67807191 9.22781880 9.79422398 1.64394852 8.22290742 8.15493099 -0.09295553 4.27623609 9.43448041 10.14182079 9.56402389 10.55506120 9.77376710 11.25166910 3.18002052 11.35288032 14.93515400 8.10731334 9.70628499 10.80333571 11.38661520 4.40950635 0.90696754 9.35683972 11.83206315 1.12941491 11.31851428 5.57942758 5.37732160 5.18002052 9.96092925 12.00996319 10.32661240 12.50296006 12.50156118 7.83576810 11.54453388 11.38051458 11.00262011 11.11787754 5.04996178 11.77556868 12.38636257 -0.09295553 10.35752726 10.63605749 1.76829021 5.66189208 10.65099615 9.70898108 10.52905509 11.41809706 3.87662499 7.31356240 12.13451899 11.02161325 9.92288287 9.08276086 -0.00691950 -0.00691950 -0.00512270 -0.00664320 -0.00664320 -0.00910890 0.68645000 -0.00456950 -0.00456950 3.65690000 3.65690000 3.58580000 0.00666530 0.00666530 -0.00263220 3.05670000 3.05670000 -0.00290910 -0.00290910 -0.78501000 0.00485790 0.02104300 0.72716000 0.72716000 0.72716000 0.02272500 0.02272500 0.02272500 0.69335000 0.02132300 -0.00691950 0.00027728 -0.00664320 -0.00910890 -0.00553750 -0.01684100 0.69970000 -0.00456950 -0.00456950 -0.00456950 -0.01068500 -0.00747200 -0.76757000 -0.01428400 -0.01428400 0.00000000 0.01228700 0.00666530 0.00666530 -0.76544000 -0.81112000 -0.76689000 -0.76689000 -0.00290910 -0.00290910 -0.00290910 -0.75305000 0.00485790 -0.01718800 -0.75037000 -0.73722000 0.72716000 0.78157000 0.02272500 0.02272500 0.69335000 -0.00871460 -0.01849000 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.737 -0.010 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 0.122 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.737 -0.010 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 0.122 8.5339293 14.1039640 7.4768588 9.7732520 2.5669369 10.1017601 0.3220435 -1.6780719 8.3732497 9.2251696 2.6439716 9.0845060 0.6439485 10.3807091 8.8288442 3.7143554 7.4068496 9.9690494 8.6360576 10.0263768 9.2232698 7.7835202 10.9158987 2.9658951 9.9172982 9.8033357 0.6439485 0.6439485 10.5475495 2.9070060 12.4263938 11.9887086 8.1784662 10.5127914 8.7711893 9.3318693 5.8298343 0.9069675 0.6439485 2.2289418 8.1800220 8.7783952 10.4743256 3.6074487 6.0902247 6.1675305 9.8971073 6.5888270 10.1831277 -1.6780719 10.3647262 2.9070060 4.3444095 9.7263948 6.7947719 2.1293819 10.0893976 8.2498189 4.4513232 -0.6780719 13.8187074 0.3220435 10.2464822 -1.6780719 8.4240163 3.8766250 8.1017604 8.0968279 15.707564 5.821886 8.158091 12.073376 9.266753 10.080680 12.227240 13.030963 10.778968 10.689456 12.440414 11.444384 9.356840 9.165962 2.643972 7.750401 11.302537 11.245368 7.151763 8.617798 9.089398 9.804849 10.130293 6.360959 8.694906 11.678630 6.398857 2.322044 6.360959 7.663071 11.270591 9.616087 9.945465 8.788627 13.083800 3.531494 10.823607 9.564024 10.447777 8.985599 11.684943 9.825370 10.484117 8.885237 NA 8.632517 4.129398 11.318514 8.481912 10.203155 9.960929 7.461592 14.020610 10.317101 9.708442 12.545062 10.052511 9.653518 1.129415 TCGA-A8-A08A 89 0 NA 30 breast stage i t1c n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 5 5 2 NA 3 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 9.3089296 9.4816866 11.8429378 9.2432647 8.1182818 9.4439621 10.9403215 9.3630420 10.8373854 12.8820475 11.2447713 10.1276440 3.1182767 13.1407075 3.8187177 9.2484234 7.3503028 7.6881377 10.8181435 13.4587811 0.1182268 14.0075957 6.3975052 9.5953722 10.4209208 8.3471004 0.5333640 13.3735087 10.8285143 1.7032336 8.5459441 6.9762628 NA 2.9927503 9.4991036 10.6438027 10.0075323 11.4252929 10.2969467 10.7910018 4.4875185 11.2728890 15.0417177 8.0694696 9.9464184 11.4009842 11.0556557 4.1182850 0.8552722 8.0666489 10.3940185 NA 9.0341612 4.1771763 5.6522599 4.9256387 10.0450720 11.5050425 10.4911469 12.1075581 12.5765176 8.8798332 10.5892796 10.6873653 10.8848108 10.9519626 5.0724789 11.8977276 10.3889666 -0.4667357 10.3309809 8.6626025 2.7128379 5.1182808 11.2413255 9.9988858 10.4140508 9.5220041 -1.4667357 6.8776154 13.2627277 11.1917540 10.3027440 9.9293889 0.00041593 1.32790000 1.32790000 -0.00221680 -0.00221680 0.00000000 -0.00041585 -0.00733390 -0.00733390 0.00889200 0.00889200 0.00083195 -0.00456950 0.00763920 0.01297600 0.01297600 0.01297600 0.00000000 0.00000000 0.00180300 0.00249690 0.00958830 -0.00429290 -0.00429290 -0.00429290 -0.01752900 -0.01752900 -0.02810600 0.01768400 -0.00394630 0.00041593 -0.00387790 -0.00221680 -0.04263500 -0.00861270 -0.00041585 -0.00041585 0.01098200 -0.00733390 -0.00456950 0.00374650 0.00374650 0.00889200 0.00471900 0.00471900 0.00471900 -0.00468790 0.00763920 0.02623300 -0.70899000 0.01297600 -0.70935000 -0.70935000 0.00000000 0.00000000 0.00000000 0.00180300 0.00249690 0.00958830 0.70251000 -0.00429290 -0.00429290 0.01042400 -0.01752900 -0.02810600 0.01768400 -0.00072693 0.00875280 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.687 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.687 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7669390 13.7590540 7.2714117 9.8123495 3.1182767 10.6257462 -0.4667357 NA 8.7366674 8.7633399 NA 7.4904217 1.8552323 10.2902926 9.0311713 1.7032336 6.0090537 9.0955619 12.3992459 11.5705231 9.9156192 6.8642357 10.2539912 3.8908747 9.1192208 10.2246267 7.5191613 NA 11.0049946 1.9927684 11.9908285 12.0956811 7.6677460 10.0080393 7.2781530 9.6580868 3.4875121 1.9927684 -1.4667357 3.8908747 9.7119842 10.2363577 9.7699315 3.1182767 8.4756139 7.5940155 10.5059402 6.1332327 9.3788094 NA 13.6989723 4.2882035 3.2882109 9.4798966 7.4284096 2.2337654 9.3113964 7.7157136 6.0490186 -0.4667357 13.7098042 0.1182268 10.3748837 0.1182268 8.0029612 3.7032447 7.6392278 9.7723212 13.074753 4.742772 9.302331 13.140707 10.109331 11.378613 13.458781 13.105724 9.060796 10.435695 13.235276 9.998375 8.066649 9.900188 1.118293 6.588602 10.921337 11.1959877 8.0049946 8.6496632 9.0617735 8.0371450 10.0906874 7.6856045 9.2535636 11.2447713 7.1257761 6.1915311 7.0724778 7.8341752 10.7880528 10.1017505 8.9384608 8.0705380 12.9084267 4.6830676 9.9985133 10.0075323 10.4454602 10.2402471 11.5141730 9.8410894 10.7185045 8.3835060 0.1182268 9.0041308 3.2882109 9.0341612 7.1626763 10.5098834 10.0450720 7.3015035 13.9700960 10.1494086 9.4521825 12.5082716 10.5591511 9.5473399 1.8552323 TCGA-A8-A08B 52 0 NA 1156 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 6 3 4 NA NA NA 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 4.161568e-07 9.819716 9.791232 10.799836 8.446835 8.006001 8.950409 9.933566 9.304942 10.357373 12.905104 11.219335 9.844880 2.143067 16.528714 5.213444 8.903275 6.786910 7.843494 11.264588 12.713100 2.821118 13.372954 8.049945 9.757602 11.433534 5.549047 3.143051 10.438594 11.745567 NA 7.187448 7.589310 NA NA 9.495318 9.947831 8.538802 10.846958 9.833751 10.734763 11.470831 10.887215 14.964031 8.095201 10.378590 10.083221 12.481568 4.865518 NA 8.903275 11.518094 NA 10.657176 4.775325 4.950408 5.549047 10.253668 12.092881 10.213444 10.751124 12.699177 6.087913 10.193991 9.811230 10.931609 10.269242 5.728016 12.383368 11.134009 NA 9.811230 8.973411 2.991046 5.178679 7.775323 9.900611 9.314982 8.725008 5.679106 10.153163 12.861587 11.604943 9.570995 9.059531 -0.118870 0.973580 1.491100 -0.105390 0.179660 -0.560470 0.215760 0.578170 0.612080 -0.039394 -0.039394 3.656900 0.555330 0.815910 0.321570 0.321570 0.321570 0.000000 0.434630 -0.190740 0.379900 0.297400 -0.584120 3.656900 -0.580380 0.010564 0.010564 -0.221820 0.455470 -0.118870 -0.118870 -0.120820 -0.563660 -0.575550 -0.562900 0.073833 0.073833 0.580590 0.612080 -0.587840 -0.114950 -0.102990 -0.039394 0.151590 0.151590 0.151590 0.151590 0.227000 0.227000 0.321570 0.321570 0.321570 0.321570 0.000000 -0.558670 -0.558670 -0.194120 0.323120 0.297400 -0.585950 -0.584120 -0.589480 -0.554570 0.139540 -0.221820 0.455470 0.296120 0.273950 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.140 0.140 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.163 0.269 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 0.289 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.140 0.140 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.163 0.269 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 0.289 7.821126 11.888224 6.010950 8.751863 4.280556 10.381459 3.406088 NA 8.582677 7.500606 NA 5.576014 3.280556 11.052347 9.300906 3.143051 5.312981 9.452303 9.193991 9.734015 9.027628 8.417316 8.792670 NA 8.006001 9.215589 6.087913 NA 10.035445 3.821129 13.990894 12.475538 6.960677 10.136276 11.644095 8.766570 1.406101 1.406101 NA 6.960677 8.622026 9.308966 11.209143 2.143067 6.521011 6.493551 9.685312 6.960677 8.020798 NA 9.409841 3.143051 2.628470 9.748326 7.963539 5.654017 8.589310 7.940067 8.725008 2.821118 14.020568 NA 9.535372 NA 7.213444 5.679106 8.143054 7.798406 12.124855 4.406088 7.685312 16.528714 10.097250 11.339779 12.713100 10.534513 9.320972 10.217731 12.976577 10.981628 8.903275 8.493551 3.280556 7.078514 10.686859 10.9152037 3.9910547 9.1180422 7.9452472 8.4504826 10.0915499 6.0690534 6.3129791 11.2193353 5.4935513 0.8211387 6.1961664 7.2425177 10.4658837 9.3249519 7.1520424 8.5859976 11.1836178 6.9809975 13.2602777 8.5388024 10.5950894 9.2866924 9.8831722 8.6090287 10.3029255 8.3757150 10.1340090 8.1426483 6.9085884 10.6571764 4.2134406 10.3229632 10.2536680 8.0925891 14.2381214 9.9085888 10.6814371 12.3294160 10.7444535 9.0109507 NA TCGA-A8-A08C 65 0 NA 881 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 5 2 3 NA NA NA 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.5159694 9.9971957 11.9086046 10.1155383 8.2722897 9.7870999 10.1914532 8.5541625 9.5741691 11.5127963 11.2039334 10.3941948 3.3447149 12.8850311 5.8215240 8.4739922 9.2699175 7.9574550 12.5132142 13.2193320 1.7597524 14.3783846 4.7776669 9.2168567 11.3316889 6.5875660 -1.5623461 11.9151975 8.9416445 2.3447149 8.1278164 6.8215227 NA 3.1382575 9.8290623 11.3594737 9.9890463 11.2123998 10.9798832 11.7691555 6.0451481 12.7201108 14.7576848 8.6215658 9.5862953 11.6628754 11.8329511 4.1382575 -1.5623461 9.8577789 10.1049302 -0.5621331 10.9069517 3.4822158 4.9456124 4.4822158 10.2623797 11.7162681 10.7304278 13.3788204 12.9873627 8.0133579 11.5728866 11.4451473 11.2338582 11.5299151 5.0525289 13.0999863 10.9572092 6.8682707 10.0543674 9.5272692 3.0275787 4.9924059 11.5314012 10.5961128 10.3563092 10.8109557 NA 8.7732091 12.2125028 10.2926870 10.5242866 9.4043241 1.48580000 2.73970000 2.76240000 0.89464000 0.84019000 -0.08657500 -0.05902500 0.77172000 0.71944000 0.84846000 0.84846000 0.84846000 -0.02605500 -0.02605500 -0.02523400 -0.02523400 -0.02523400 -0.03724300 -0.03724300 -0.05997900 -0.03003700 0.00914520 0.02171800 0.02171800 0.02171800 0.04639100 0.04639100 0.04639100 0.02710200 0.00233290 -0.05053000 -0.03639500 0.89464000 -0.04944900 -0.08657500 -0.05902500 -0.07161200 0.77172000 0.71944000 0.71944000 0.67540000 0.66710000 0.84846000 0.72335000 0.72335000 0.72335000 0.78269000 -0.02605500 -0.02605500 -0.02523400 -0.02523400 -0.02523400 -0.02523400 -0.03724300 -0.03724300 -0.03724300 -0.05997900 -0.03003700 0.00000000 -0.94013000 0.02171800 0.02171800 0.81213000 0.04639100 0.04639100 -0.00030243 -0.02743000 0.03408800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 0.000 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 0.000 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 0.265 7.3536982 12.6716630 5.6177275 9.2451736 2.2858165 10.4920838 NA -0.5621331 8.4971632 6.4546267 -1.5623461 6.7665832 0.0227584 10.0288734 9.0852770 0.4378669 4.9296727 9.1631850 12.6664870 9.7704146 10.0367411 8.3447091 10.2655583 1.6077209 10.0395894 9.4072051 5.9535190 NA 10.6411667 3.3920151 13.6071956 11.6217641 7.5463427 11.0605569 7.8386978 8.9346725 1.4378136 0.0227584 1.6077209 4.7597471 8.7069452 9.3484613 9.4307569 3.5671073 8.0910397 5.2579987 10.7133612 6.9013436 9.2903481 -0.5621331 13.2342132 1.7597524 4.1102463 10.3639775 6.0495066 -1.5623461 7.1417219 7.0562042 2.6857384 -0.5621331 14.0988451 -0.5621331 9.8242200 0.0227584 9.3035520 4.6077446 7.6952067 8.4808459 13.4819275 2.8972598 9.0086230 12.8850311 10.3412675 11.4973321 13.2193320 13.8242874 9.5025613 10.9413960 13.5801651 11.3114550 9.8577789 8.8161136 0.7597524 7.3655963 10.5176367 11.2903481 4.2451762 9.0038726 9.0180772 8.0095711 11.3608136 5.8640846 8.1708339 11.2039334 5.6569882 -1.5623461 9.6678391 5.0828303 11.0607856 10.2876146 8.6509228 7.6423897 14.8107687 3.3920151 9.7261945 9.9890463 10.4715858 9.9928871 11.4217029 9.9211306 11.0347072 9.7815595 0.0227584 9.1802543 0.0227584 10.9069517 6.6618208 11.2257783 10.2623797 7.6738327 13.8052334 9.9226415 10.3124158 13.0019086 10.0960301 10.9153239 -0.5621331 TCGA-A8-A08F 59 0 NA 1004 breast stage iiic t2 n3a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA NA NA 1 2 NA NA NA NA 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 7.976338e-07 9.8236437 9.6329307 12.1457071 9.4521525 9.7169367 9.5786314 9.8517882 9.6702866 9.6740446 14.2926096 10.0510542 11.2610074 3.0135873 12.6581948 2.2250898 9.0591235 4.9944711 7.8767877 5.3048104 12.2422716 NA 13.0911682 6.0040564 10.2223658 11.0242180 7.6963896 3.0875816 9.8270232 11.0864525 3.5730109 7.8819961 7.0088264 NA 3.8531174 9.6244100 10.2474514 9.6360166 9.4910183 9.9640971 11.7348586 -0.2342955 11.4036353 14.8616052 8.6529944 9.8018255 11.5073296 9.4773189 5.5338374 7.3950088 8.9787562 9.7761800 NA 10.1892932 8.2615068 7.0324381 6.0694337 8.8570874 11.8407968 10.1792799 10.6364019 12.8673815 8.7443623 9.9896536 9.7970086 10.9729714 11.1439469 5.3655631 11.0645737 11.0719985 -0.2342955 10.5874259 9.7198483 2.3518262 6.0785351 10.0937659 9.9842152 11.1782218 10.1808656 0.3506104 8.5953746 11.6018996 10.4171522 9.8975089 9.4755973 -0.86397000 0.07124800 1.22510000 0.42085000 0.51856000 -0.44232000 0.86553000 0.44392000 -0.44262000 3.08270000 1.07900000 2.00670000 0.82823000 -0.45511000 -0.45168000 1.33690000 0.81825000 -0.50743000 3.65690000 -0.97551000 0.66456000 0.47512000 -0.51094000 0.25246000 1.53940000 0.18616000 -0.08956700 0.56418000 1.01380000 -0.52215000 -0.45018000 0.09985000 0.45825000 -0.47755000 -0.49965000 -0.50234000 -0.46449000 0.44392000 -0.42025000 -0.01986300 -0.38313000 0.76083000 -0.90434000 -0.00152430 -0.46174000 -0.45351000 -0.45351000 -0.45511000 -0.48187000 -0.97622000 0.35332000 -0.44868000 -0.44868000 -0.43767000 -0.41058000 0.91986000 -0.93909000 0.00097064 0.02462200 -0.44469000 -0.51094000 0.88406000 -0.43929000 -0.23606000 -0.57437000 -0.47046000 -0.93526000 -0.09036100 -0.455 -0.455 -0.449 -0.449 -0.451 -0.451 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.159 -0.159 0.000 0.915 -0.470 0.000 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.414 0.308 -0.455 -0.455 -0.449 -0.449 -0.451 -0.451 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.159 -0.159 0.000 0.915 -0.470 0.000 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.414 0.308 8.9368287 13.5098551 6.0417774 10.0004694 4.8422548 10.9166685 1.0875986 NA 8.0064433 9.6134922 NA 8.3202410 3.6725385 10.0722834 9.6352458 6.5470117 6.2575048 8.3913609 9.6375572 10.3298015 8.7770889 8.5937885 10.9699175 3.5205354 9.9902566 9.9878431 1.7656620 NA 11.5433183 -0.2342955 12.7873260 12.3721728 7.9077590 8.8451369 8.7768791 9.1898181 5.0510545 2.3506104 -1.2344653 1.5729867 8.7628315 10.4786088 9.8458033 1.9355729 8.6945404 5.8100472 10.3449679 4.7656514 10.5754201 NA 10.4004630 3.4095131 3.9355729 8.2457961 7.9099789 1.9355729 9.8209344 9.7817638 8.1536691 2.0875647 13.1084906 -0.2342955 11.3732135 NA 7.2654978 5.7768804 8.0717139 9.0123927 14.211356 6.459138 8.160114 12.658195 9.977546 11.079669 12.242272 12.739529 10.017501 9.995672 12.128692 10.697128 8.978756 8.055671 2.573011 7.834430 11.601900 10.767764 7.774081 7.943072 9.496971 6.402277 9.358539 7.663498 4.672544 10.051054 6.690465 NA 8.510486 8.853804 10.654015 9.873523 10.751850 7.391360 11.153400 5.191918 11.107474 9.636017 10.555186 10.589019 11.257255 9.582636 10.806284 8.876788 4.123203 8.992377 4.225082 10.189293 7.601702 10.320720 8.857087 7.573007 12.651444 9.969612 9.282337 12.118385 10.242904 9.470420 2.573011 TCGA-A8-A08G 41 0 NA 607 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 3 5 1 1 3 5 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 9.8022814 10.1911787 12.2238389 9.4425886 8.9360719 9.0166810 10.9989940 10.0439025 9.4128035 14.0505050 11.9476701 10.5840246 1.7999162 13.2041010 4.1218609 8.0255443 4.1691714 8.8296825 9.7257367 13.0537334 1.6744155 14.6734594 2.6744155 8.8064948 11.6225060 6.4292912 1.6744155 9.2877752 9.4539743 2.7999369 7.1218629 7.8092974 -0.2000838 3.5368984 9.3545240 10.6051416 8.8306024 11.1884906 10.0643778 11.5217464 2.0223323 10.7669212 14.5422972 9.3930834 10.0787718 12.1079897 11.8353070 4.0729547 4.6744042 8.8406816 10.4326275 0.2149951 11.0349521 5.7618677 6.1278623 5.0351532 10.6407131 12.1294512 10.6856315 11.9273922 12.7783477 8.9110708 11.1951122 10.8732533 10.9729876 11.3914575 5.7463531 11.7719576 11.4421373 2.1218774 10.7202880 9.5003748 3.0754471 6.0158722 9.7800747 10.5357732 11.0557506 9.8534086 2.8588364 7.5681195 11.8542003 10.8800864 10.8904886 9.1560204 -0.608060 1.467100 1.655800 -0.067056 -0.073743 0.322050 0.454450 -0.155410 -0.155410 3.656900 0.130950 0.615840 0.476150 -0.059939 -0.382690 2.987900 -0.599930 0.475640 0.453940 0.434460 -0.055769 3.656900 0.136720 0.669560 1.427800 -0.197000 -0.197000 -0.466000 1.433500 0.000000 -0.608060 -0.078231 -0.067056 0.322050 0.400940 0.453940 0.453940 -0.155410 -0.155410 -0.155410 0.932040 0.419490 -1.146000 -0.601480 -0.601580 -0.040269 -0.035857 -0.059939 -0.052126 1.552200 -0.578020 -0.597010 -0.597010 0.475640 0.453940 0.453940 0.430920 -0.185720 -0.581270 -0.571200 -1.110400 0.132280 -0.083672 -0.197000 -0.174240 -0.040480 -0.221450 -0.575160 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 0.000 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 0.000 8.6672138 12.9269084 7.9084599 9.3898982 2.4628899 10.3820771 1.2149951 -1.7848806 9.0596784 7.7886198 NA 7.0430776 1.0223323 10.5278556 9.3097101 4.6243641 6.3077291 9.7829288 8.5278554 9.6354593 10.4720776 6.9631654 10.1025740 3.0223323 8.9180111 9.4041796 2.2149641 -0.7851292 11.3355346 3.2593629 12.1274878 11.9756926 6.9930493 10.6571386 10.4497901 9.2366466 3.6072948 0.7999162 -1.7848806 6.3234980 9.3300163 9.3195714 9.2219998 2.7385301 11.2797727 6.6328251 9.3867750 6.0093875 10.0596784 NA 10.5752711 2.7999369 6.5503636 9.8554570 7.5775957 3.2593629 9.3221898 8.7355912 9.4910971 0.7999162 13.8883093 -0.2000838 10.6219748 0.2149951 7.9309348 4.0478612 7.9831572 9.2435694 15.341761 5.989759 8.833358 13.204101 10.551758 11.206494 13.053733 18.563874 8.598202 10.805092 13.027401 10.272288 8.840682 8.793345 2.214964 8.667214 13.292665 11.046874 7.956439 8.504991 9.318260 9.397988 10.645122 6.670299 7.157487 11.947670 6.662056 1.536898 7.470002 8.906228 9.773872 10.279715 10.112818 10.892032 11.809647 4.956438 11.093219 8.830602 10.507869 9.564254 12.074507 10.329366 10.700047 8.857024 1.384879 9.673841 4.169171 11.034952 7.318261 10.332616 10.640713 7.439046 12.723565 10.585932 9.654804 12.548338 10.387713 9.737064 2.738530 TCGA-A8-A08H 66 0 NA 0 breast stage iia t2 n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 8 2 2 NA 2 2 3 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 10.1257668 10.1246160 11.1437740 9.7463346 8.4333580 9.3909088 7.7934472 10.2586611 10.3667750 10.7952566 9.9761905 10.3152447 5.9729959 11.1266294 2.9209030 10.8397713 5.6278607 8.7388323 7.0380169 9.7649215 NA 10.8863528 4.5338872 9.5549717 8.7612231 4.9419702 NA 10.6204826 9.4782027 3.8334467 7.9882632 8.1553733 1.1553607 5.0033684 9.5681549 10.3117093 9.4987812 10.0459416 9.6213477 10.7711869 3.2928701 7.2805286 15.3105552 7.7663686 9.2160692 11.3101914 10.9761905 4.4184059 0.8334164 9.6726490 11.3813037 -1.1665027 11.3451979 8.1621204 7.3609226 8.3091785 11.1095696 11.7363855 10.4174682 11.7375153 12.7079464 7.9729964 10.8506016 10.4397116 10.9812861 10.9380440 4.6408002 11.3013054 9.5476908 1.4184059 10.8277986 8.9819217 1.8388308 7.8306249 10.1732952 10.3041041 9.8207092 9.8819321 2.2928701 6.7876414 13.0144421 12.2409785 9.6115223 9.5647642 -0.0035982 -0.0035982 -0.0276640 0.0036091 0.0021932 -0.0021044 -0.0071747 0.0244470 -0.0218100 -0.0330430 0.1896200 0.1896200 0.0021932 0.0021932 0.0055267 0.0055267 0.0055267 0.0340870 0.0340870 -0.0027967 -0.0874720 0.0110100 0.0270490 0.0270490 0.0270490 -0.0062421 -0.0011348 -0.0011348 0.0351330 -0.0263980 -0.0035982 -0.0030269 0.0083089 -0.0021044 -0.0021044 0.0042760 0.0042760 0.0244470 -0.0218100 -0.0218100 0.0037204 0.0037204 -0.0330430 -0.0649360 -0.0649360 -0.0649360 -0.0649360 0.0021932 -0.0093229 0.0055267 0.0055267 0.0055267 0.0055267 0.0340870 0.0340870 0.0340870 -0.0027967 -0.0874720 0.0161200 -0.1096100 0.0270490 0.0270490 -0.0294730 -0.0062421 -0.0011348 0.0473830 0.0016381 -0.0824980 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 0.00 0.00 0.00 9.7320466 13.9778247 5.2257608 10.7410870 2.9627341 9.7160882 4.3570100 -0.1665027 8.6343450 9.6391891 -1.1665027 9.0350055 1.6408060 10.5032161 9.0562402 1.1553607 10.8309776 9.5690013 7.2763887 8.8078598 9.3471038 7.2300502 12.5928133 5.4847826 7.9262023 10.2763887 3.9209126 NA 11.4333581 1.4184059 13.1251915 12.7168522 8.9209081 10.1514230 9.9755522 9.2897997 3.5883369 4.5338872 -0.1665027 0.4184598 8.1755201 9.4352160 8.6631681 7.0477641 6.2142084 5.7759592 9.9646591 5.6408002 9.6294849 1.6408060 11.4310323 4.5338872 4.5883309 9.3791626 5.9857304 4.1553769 10.5054285 10.7995901 5.6016282 4.3570100 13.8184421 2.1553607 10.6363654 -1.1665027 8.5933332 5.0232687 7.8723640 9.4370717 11.649029 6.380340 8.514684 11.126629 10.318429 10.411346 9.764922 10.716470 9.138367 10.761223 12.798237 11.348159 9.672649 8.263898 NA 7.109570 10.773024 11.278977 5.081374 9.199768 7.491657 9.012110 9.268396 7.858585 7.150858 9.976190 7.123464 -1.166503 6.128067 7.630263 11.560515 11.016770 8.162120 8.659994 11.131508 7.057447 10.413266 9.498781 10.419816 9.422160 10.843973 10.946536 10.578279 9.216069 NA 9.910007 5.325300 11.345198 7.372604 10.336774 11.109570 7.380340 14.244493 10.419816 11.065866 12.532150 10.207398 9.616443 3.920913 TCGA-A8-A08I 53 0 NA 365 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 7 3 1 NA NA NA 1 4 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 2.774378e-07 11.553311 9.937091 12.578400 10.518803 8.708952 9.269628 10.315303 10.490768 7.628412 14.392844 11.312678 11.151484 2.463309 11.681213 3.245709 8.684408 6.241512 8.724083 9.282461 12.806268 3.796733 12.686775 5.519888 9.844594 10.682473 9.929279 5.019119 13.700651 9.913855 1.626813 7.550767 7.291123 1.989357 5.441500 10.828577 10.112920 7.660226 11.098623 10.969513 11.914350 7.526807 12.028597 13.878940 9.545662 10.394514 11.705049 11.635732 5.389305 3.491879 9.332188 11.880903 -2.180495 11.062919 5.847353 8.363446 5.825073 8.570155 11.898349 10.164576 11.404763 12.749169 7.878792 11.799320 11.438282 11.309672 12.246761 6.159298 12.420406 13.077204 6.495404 10.903758 9.498048 4.092216 6.885537 10.564492 11.650755 10.109179 10.785773 2.574344 7.813801 12.978689 11.482005 11.010970 9.912535 -0.453080 -0.021921 0.794330 0.133620 0.158760 -0.438830 0.228700 -0.754180 -0.925400 0.043015 0.043015 0.467590 -0.315060 -0.318230 0.082476 0.127120 0.164000 0.038530 0.038530 0.399940 0.510540 -0.501730 -0.115740 -0.115740 -0.115740 -0.546230 -0.553070 3.656900 0.768880 0.683470 -0.475660 -1.292900 0.133620 -0.405280 -0.432680 0.228700 0.022259 0.713770 -0.911910 -0.973240 -0.464080 0.000000 0.020996 -0.232760 -0.204730 -0.482180 -0.522690 -1.041600 -0.332140 -0.585590 0.132140 -0.482180 -0.482180 0.038530 -0.023703 -0.089332 -1.292900 0.505110 -0.521340 0.382550 -1.292900 -0.115740 1.259200 -0.568730 0.079880 0.768880 -0.936810 -0.602640 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.447 -0.233 -0.482 0.195 -0.395 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.447 -0.233 -0.482 0.195 -0.395 9.8552779 11.8108812 3.1048566 9.9341663 8.6967322 10.7774568 2.7263299 -1.1804953 8.2850142 7.4524431 3.4044127 5.3487990 5.3740379 10.0821300 8.9755310 3.4044127 9.1988264 9.9516263 9.0386164 10.1229433 9.6157674 8.2309590 8.5776713 4.0862318 9.6215603 9.3361330 6.1002187 -2.1804953 10.4745314 3.9487317 11.8390386 13.0714480 5.9943738 10.0273773 10.5066048 9.9351419 8.3032638 3.1413837 0.1414328 5.7020923 8.4651064 9.5892858 9.2921387 2.4633086 6.9165579 6.0142057 10.5522513 8.3262515 9.4909890 NA 10.8480447 4.3430098 3.6523373 8.8878366 6.8129243 7.8638418 9.4341578 10.6181222 8.7180492 -0.5955328 12.9564390 2.0673634 11.1405304 -0.5955328 6.8665717 4.8306762 8.4128391 9.0410351 9.4251219 6.9253562 8.1140687 11.6812133 10.9802648 10.6551036 12.8062677 10.9885900 9.3158024 11.4793323 12.6460460 9.4341578 9.3321883 8.1681762 -0.5955328 7.4230739 11.3374863 10.5714103 8.2351895 8.5843195 8.2675644 9.7612291 10.1839628 8.1481227 6.9968678 11.3126779 8.3692326 -0.5955328 7.5991675 10.1840614 10.5625993 10.5695268 8.9532323 8.0117405 13.3212540 8.9135255 11.5996842 7.6602256 11.4990380 10.1695584 10.2055798 9.2314883 10.5703642 9.1868628 1.9893570 8.9149504 8.8320726 11.0629195 5.7263381 10.4006815 8.5701547 8.4669064 12.8223508 10.6973071 10.4401259 13.2379594 9.8798061 9.2992282 3.5473635 TCGA-A8-A08J 52 1 1127 NA breast stage iv t4b n3 m1 female 2005 NA no infiltrating ductal carcinoma NA NA NA 6 3 1 NA 1 6 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 6.935946e-08 10.0268648 9.8146342 11.2241317 9.0296224 8.9298244 8.9288399 9.3235471 9.9872215 10.1540433 13.9689604 11.0999680 10.8170304 -1.5877062 16.8475607 3.2701402 8.8446970 4.1400751 8.7708063 7.1502469 12.8706898 0.7340484 13.8348440 0.4121854 9.8258411 11.1976075 8.2033177 2.8715874 9.6588422 10.3354825 0.7340484 8.5631715 6.7159359 NA 5.0703679 9.8499070 10.6594892 9.8478253 9.9777331 9.2917382 11.1741217 1.4121312 8.8685093 14.6778799 7.8290789 9.6379650 10.9077602 10.8170304 5.0120680 5.6975570 8.7385844 10.5190450 -1.5877062 11.0881120 5.0560112 6.2130556 5.3894360 10.9025045 11.5690281 10.3565010 10.6276880 12.5378913 7.8613034 10.9209402 10.5536235 11.0467392 10.4562076 4.7520046 11.7486616 10.6636374 NA 10.5786320 8.9258826 2.3190398 6.1670427 10.1229614 9.9566365 10.2697472 10.3269138 2.4996291 7.2855992 11.9362069 10.7113630 10.4181304 8.8331678 -0.36771000 0.39894000 0.45939000 0.41680000 0.17422000 -0.00277070 0.04939800 0.03589400 -0.50846000 -0.48418000 -0.14695000 2.35540000 0.32414000 -0.09973600 -0.51270000 3.36020000 -0.42189000 0.32728000 0.66069000 0.40541000 -0.03925800 -0.05926900 -0.24837000 3.65690000 3.65690000 -0.48932000 -0.01023200 -0.03667400 1.31130000 -0.51393000 -0.36771000 -0.02589300 0.41680000 -0.02931100 0.00000000 -0.00066427 0.00083195 0.03863000 -0.50846000 -0.54003000 -0.09485600 0.10772000 -1.05670000 -0.38625000 -0.38625000 -0.39022000 0.08419400 -0.09973600 -0.10513000 -0.51270000 -0.56744000 -0.45045000 -0.45045000 0.66069000 0.66069000 0.85878000 0.86731000 -0.03925800 -0.04926400 -0.00346270 -0.24837000 -0.44059000 -0.25431000 -0.48932000 -0.03667400 -0.13729000 -0.84010000 -0.51285000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.476 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 0.000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.476 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 0.000 8.3100006 13.9311462 8.2000575 9.1195141 3.7882368 11.3484249 0.7340484 -0.5879231 8.7926159 7.8797603 NA 8.3165037 1.4121312 11.3670783 8.6313237 2.8044666 5.0120680 9.8050090 8.4982912 11.1548855 9.7050690 8.1177875 10.7044766 2.6600843 9.0396890 9.5485054 0.9971117 2.3190398 11.8958448 -0.5879231 11.9118763 12.0784900 7.3487928 10.0836960 10.7650261 9.5022673 6.5770617 1.8715677 -0.5879231 4.2947972 8.5141305 9.4694699 10.5375684 3.1670367 8.5817542 7.7430719 10.7230517 5.6409737 10.0254840 NA 9.8741459 2.3190398 2.9971117 9.2136693 5.5415396 6.2825195 8.7352097 8.6754243 8.2339288 1.7340918 13.6908948 0.4121854 11.2458358 -1.5877062 8.2902060 4.3190470 8.2701360 8.3779393 13.6683338 6.4400602 8.4442007 16.8475607 10.2940337 10.9996981 12.8706898 10.2102217 8.4205835 10.6935055 13.0715935 8.4275701 8.7385844 8.3546695 0.7340484 9.6130537 11.8294801 11.047420 8.601979 8.727304 8.969619 8.589574 10.128670 6.985802 8.402259 11.099968 6.650559 1.412131 7.915981 7.757494 10.407922 10.092954 8.893954 9.664229 10.027325 6.959049 10.561953 9.847825 10.157829 9.421284 10.889660 9.103899 10.683910 8.688279 2.499629 9.258711 6.834219 11.088112 8.249783 10.247416 10.902505 7.000870 12.874402 10.231137 9.933755 12.031573 9.714794 10.004145 2.112600 TCGA-A8-A08L 89 1 304 NA breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 6 3 4 NA 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-06 1.491228e-06 9.3799062 9.5731522 11.7352446 9.4358288 9.2063697 9.2332364 10.6684756 11.1100543 10.1446324 14.8101117 10.5622957 11.3470747 2.8031650 13.4303248 3.3881206 8.2935590 6.6291351 7.8275485 5.9211602 12.7410728 0.9287304 12.1738515 6.3324179 9.6189316 11.2022963 7.6924607 1.3437489 8.5598237 10.7673737 4.4311950 9.8445743 6.1316348 NA 4.5916615 10.2256111 10.4512765 8.8896621 11.4268793 10.9345534 11.4796020 12.3741410 10.9347872 14.5139901 8.6525378 10.3622804 10.7639559 11.2761318 6.2202487 4.2017123 9.5304658 11.1139834 -0.6563079 10.8517748 5.4522561 6.2385500 5.0161575 8.3799060 12.0472035 9.2818417 10.7231108 12.9929325 6.0441711 11.2073380 10.8980167 11.3276167 11.4915733 4.9584437 13.0782833 12.1034126 -1.6560806 10.0192485 9.3224429 5.1429484 4.5725502 8.7908157 10.7411397 10.4723713 9.6679131 3.8672936 9.5659237 12.6231980 11.8040604 10.3922193 10.1361161 -0.68915000 0.63810000 0.69167000 0.67845000 0.82060000 0.03693500 0.03284500 -0.02316300 1.35570000 0.03214000 0.03214000 0.86374000 0.67233000 -0.67122000 -0.68013000 0.02412700 -0.68579000 -0.68779000 0.72659000 0.64546000 0.05608500 0.45173000 -0.67499000 0.01321300 0.70082000 0.02525000 0.02525000 0.00097064 0.73057000 -0.00443120 -0.68915000 0.00000000 -0.69396000 -0.70316000 -0.71229000 0.03284500 -0.70388000 -0.01849000 0.71246000 0.62188000 -0.70729000 0.01819400 0.04613300 -0.69929000 0.04698400 0.04698400 0.04698400 -0.33399000 -0.34584000 -0.68013000 0.02412700 -0.68579000 -0.68679000 0.03778200 -0.68906000 -0.68906000 -0.69812000 -0.67848000 -0.67407000 -0.67536000 -0.67499000 -0.65043000 0.01167100 -0.04807200 -0.69541000 -0.67536000 0.68012000 -0.00609040 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.000 0.000 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.000 0.000 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 8.7155090 12.4050193 2.0441843 9.7398020 3.6656656 12.6152684 3.9584437 NA 8.8983214 8.0319829 1.5136423 8.3521609 4.4311950 10.8535075 9.2979287 4.5916615 8.9602812 9.4165349 11.8703540 10.7681612 9.2260699 8.1970422 11.5111506 2.9578589 8.3238722 9.7856391 3.8672936 NA 10.6667872 3.3437347 11.7988028 12.5146746 7.4704368 10.5638084 8.0459049 9.1678958 6.5677340 2.6656656 -0.6563079 6.7783610 8.5713484 9.4820042 11.0929734 4.3881275 9.9709517 5.9875892 9.9455032 6.7531231 10.4205481 -0.6563079 10.7204005 3.6656656 2.7360420 9.8808441 6.7925925 4.2744704 9.7220272 8.8867644 6.7908163 1.9286925 13.3409119 2.5916555 11.1674977 -1.6560806 8.2339968 4.2506206 9.0690988 7.8983214 8.647890 8.204820 8.831573 13.430325 10.266688 11.320655 12.741073 9.938057 8.889662 10.205982 12.713466 7.879008 9.530466 9.294288 1.513642 8.192355 12.116666 11.879251 5.553185 8.143014 8.935255 9.115222 11.012602 7.163911 7.253625 10.562296 9.109433 NA 8.265573 8.629435 10.846813 11.126935 7.433845 10.141799 9.046771 6.859433 11.130016 8.889662 9.925404 10.722027 11.517253 10.021452 10.631156 8.761585 7.962118 8.593794 6.226376 10.851775 6.030232 11.644371 8.379906 7.774707 12.592105 10.729864 10.169884 12.288445 11.988941 9.918799 2.431195 TCGA-A8-A08O 45 0 NA 943 breast stage iv t2 n3a m1 female 2008 NA no infiltrating ductal carcinoma NA NA NA 2 2 1 1 2 4 3 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 10.9410860 10.3799201 11.9810273 9.9725290 7.7051817 8.5145918 10.6914381 9.8925979 9.1480258 13.4097687 11.7221789 10.6918014 2.1959460 13.4013510 4.0940671 9.2610566 7.0984585 8.7166545 9.3082676 13.4557432 3.5438670 13.8994961 5.3512255 8.8358625 11.2094595 6.8292724 -0.2634384 9.4584683 9.4352196 3.4914042 8.3401412 8.1690566 NA 3.3803693 10.5650480 10.3530637 7.5851376 11.5207407 9.8696571 12.1085637 4.5178741 11.9108164 14.6257573 9.1556956 10.1033834 11.3767598 11.8783027 3.9064385 5.8450384 9.6107277 11.3962878 NA 11.3167734 7.7999097 4.4914042 5.0219150 10.2590964 12.1529165 10.2766429 12.6907111 12.7229791 7.7671820 11.4464602 10.9734767 11.1115543 11.5236012 5.4644363 11.9223194 11.8020992 -1.2636116 10.2536921 8.9288076 3.7419199 3.5438670 10.2678962 10.3158308 9.5843552 10.3373570 2.6433945 8.3785667 12.1036565 11.0184449 10.2482675 9.3785665 0.0212550 0.0212550 0.0212550 -0.3118400 -0.3104400 0.0251810 0.0232610 0.0326350 -0.7730700 0.7807100 0.0146810 0.0343260 0.0000000 0.0000000 0.0174760 0.0174760 0.0402570 0.0135640 0.0135640 -0.3616400 0.4423200 -0.3627800 -0.7690700 -0.0072632 0.3261600 -0.0374200 0.6968000 0.6968000 0.0219550 -0.3790400 0.0212550 0.0530250 -0.3118400 0.0104960 0.0251810 0.0270070 0.0270070 0.0326350 -0.7730700 -0.0218510 0.0812510 0.0773600 -0.3499000 -0.2452700 -0.2452700 -0.2452700 -0.2509700 0.0015547 1.8218000 0.0174760 0.0174760 -0.7605900 -0.7605900 0.0135640 0.0128660 0.0050680 -0.7545600 -0.7664200 -0.3627800 -0.7646800 -1.2929000 -0.0072632 0.0392680 -0.7851400 0.6968000 -0.7671000 -0.3669700 -0.7736700 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 -0.247 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 -0.247 8.2659455 13.9247173 9.3195976 9.5796506 1.0085586 10.8391467 0.7364750 1.3214664 8.5080043 8.3640488 NA 8.5841361 0.7364750 10.3200677 9.0448539 2.4369613 8.0425765 8.9349599 8.0196030 9.8371772 10.0583415 8.8747865 10.5231929 0.6624790 9.4930711 9.4273858 4.5944948 0.3214664 10.5878735 2.5438670 11.8057967 11.4284764 7.9484029 9.7726884 7.7644211 9.8332299 4.1288295 -1.2636116 1.3214664 0.3214664 9.6914382 9.4972347 10.4269493 4.9653318 7.9837301 6.6731522 9.6598423 6.4089394 9.0896615 -1.2636116 10.3758555 3.1288378 3.8239735 9.7335603 5.5354714 4.7809085 8.4997271 7.2403401 6.6191577 NA 13.4525304 -1.2636116 10.2576245 NA 8.8463454 4.3512255 8.3006642 7.5566938 14.4954667 5.9064409 8.7080582 13.4013510 9.7222500 10.3717795 13.4557432 12.8881657 9.5005571 11.3070371 12.9337315 10.8677287 9.6107277 8.6598422 0.3214664 8.1585794 12.2331190 11.094891 7.461028 9.512125 9.329906 9.194922 10.782998 5.791798 7.606880 11.722179 5.543870 1.321466 7.137394 7.470343 12.088696 9.761654 8.767058 8.730868 13.239409 5.993903 12.815747 7.585138 9.759576 9.843078 11.929886 9.684152 10.709136 9.509654 NA 9.201326 5.876065 11.316773 7.328972 10.112488 10.259096 7.457614 13.635730 10.930964 9.765802 12.644626 10.075251 9.835863 2.321466 TCGA-A8-A08P 70 0 NA 943 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 7 3 1 NA 1 3 2 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.080784e-07 10.5172966 9.7058789 11.2485514 9.3294497 9.0714559 9.4471448 9.5605749 9.5758578 9.7737191 13.0957136 10.9195127 10.5279439 0.2705887 13.5127873 2.4929555 9.2554490 3.3294537 8.1653738 8.0052658 12.2901467 1.8555114 12.0588665 5.8950457 10.2180614 11.5043754 6.8045350 NA 10.1839441 11.2091555 2.2705588 7.9168146 7.1572691 NA 4.2705588 9.5271579 10.6978688 9.6513777 10.5447400 9.5582684 10.3442513 7.4929483 10.4392281 14.6432170 8.4129352 9.1160460 10.1306084 11.0628040 3.3294537 3.1450252 9.7114252 10.1993211 NA 10.9242968 6.3076453 7.1531994 5.6163312 10.2530743 11.8098764 10.2174623 10.9370759 12.6785318 8.4945576 10.7172947 9.9335210 10.6408802 10.5279439 4.6855926 13.0716581 9.6310373 0.2705887 10.4118117 9.1754415 1.6945682 6.1368045 8.6295734 10.2052297 10.2444925 10.1592992 3.0075185 6.2554497 12.1451532 10.8852659 9.3321523 8.9686818 -0.2368000 0.8413400 1.2103000 1.3603000 2.1951000 -0.0261670 0.4031400 0.3828700 2.5980000 -0.2223800 -0.2217000 3.1755000 1.0536000 0.3013800 -0.1658600 2.2850000 -0.2494600 0.6500100 0.4547900 -0.1129900 1.9660000 0.1613500 0.0459910 1.2641000 0.6226000 -0.3879500 0.0698550 0.0849320 3.6569000 -0.2167600 -0.2368000 -0.0053992 -0.2364300 0.0963800 -0.2879800 -0.0261670 -0.0261670 -0.0095426 -0.0346310 -0.0560220 0.6570000 -0.1290100 -0.1805500 -0.2267500 -0.2267500 -0.2267500 -0.1983700 0.3013800 -0.1849600 -0.1658600 0.5068900 -0.2494600 -0.2494100 0.3933000 0.4547900 0.4547900 -0.1129900 -0.1468200 0.1613500 -0.2949700 0.0459910 0.4479800 0.0918800 -0.0554990 0.0698550 0.4963500 -0.3612500 0.0969610 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.301 0.000 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.301 0.000 8.9617179 13.3718752 NA 9.4579080 5.1450252 10.8187357 2.9335160 NA 8.5513268 7.5435748 NA 8.4015554 2.6856038 10.6632312 8.8213027 5.2554479 6.8097154 9.3606685 8.5544162 9.9269809 9.4746135 7.3113024 10.7892091 3.8555213 7.1653733 9.4961651 2.9335160 2.2705588 11.0738799 1.2705289 12.3708898 12.0804581 7.5834386 10.0508223 10.3007633 9.3527051 5.0431476 2.0075185 0.6856262 7.4832547 8.7757061 9.9364841 10.0917985 -0.3143738 7.8082145 7.7079616 10.5857055 6.0431454 9.9041567 NA 9.6214951 3.4404872 3.6855926 9.0040572 5.4024459 3.9709917 9.4808215 9.5357804 8.6628734 1.2705289 13.6198372 1.2705289 10.4404810 NA 7.6014729 3.6855926 7.7516826 8.3703422 13.562350 6.292923 8.259240 13.512787 9.821950 11.247120 12.290147 10.852384 8.743585 11.344474 12.842072 10.089138 9.711425 9.272433 -1.314374 7.775706 12.070107 10.6372424 6.2091550 8.4864936 9.0120230 9.3583723 9.5023213 7.7489885 5.2091570 10.9195127 5.7516833 1.6855814 6.6628734 7.3813439 9.8642583 10.4796031 7.8778865 8.5819259 10.7901922 7.4169123 12.4679324 9.6513777 10.2738396 10.1909089 10.9104996 9.0018751 10.2067032 8.6251726 NA 9.0099316 6.0779116 10.9242968 6.8704683 10.0805920 10.2530743 7.2554488 13.3443071 10.3289988 10.1316429 12.4787903 10.6115188 9.5017771 -0.3143738 TCGA-A8-A08R 52 0 NA 30 breast stage iib t2 n1a m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 6 0 0 0 0 0 0 0 0 3.84945e-06 1.387189e-06 10.3090965 9.3215694 11.8692569 10.2226988 8.6849824 8.7303839 8.5642219 10.3889658 12.3741569 13.2669922 9.7839459 10.5412981 0.8765661 13.3287099 2.8765464 8.7954176 5.0860067 8.7703616 11.4264996 6.7713719 -1.7083964 6.7551159 9.0892534 9.3448391 11.2512318 6.7874468 -0.1234339 9.8218959 11.6930049 2.8765464 9.7115522 8.1037693 NA 5.9989514 8.8896445 8.8989224 8.6924715 9.6219487 8.9426438 12.2636743 3.0989416 6.3250158 16.5086741 8.3618070 10.5990775 10.8557415 11.5662613 6.8229736 3.6839098 10.2508696 10.2609786 -0.7083964 10.5925165 5.4814152 7.5442574 5.2457885 10.2282300 11.8179690 9.5053038 11.3780600 12.8355905 8.4615171 10.3010708 10.1795399 10.9386007 11.5749698 4.6491441 12.6709704 9.5677164 -1.7083964 10.0663790 9.7309035 4.1035732 5.7178573 9.0949159 10.0835688 12.1973551 10.6073077 3.5769937 4.8151553 12.8901680 11.1260631 9.4508327 10.0028288 -0.124730 0.577190 0.078438 0.045829 1.385100 0.144880 0.547350 0.770990 0.486130 0.118000 0.349250 2.530900 0.460070 -0.076145 -0.265640 1.055700 0.348760 0.116090 0.484230 0.022304 -0.039258 0.260430 -0.364990 1.112600 0.271900 2.512100 0.363790 0.025956 0.488710 -0.204230 -0.124730 -0.552160 -0.036308 0.226690 -0.640570 -0.483230 -1.013600 0.640850 0.486130 -0.185840 0.429570 1.159100 -0.442320 -0.549950 -0.549950 -0.177650 -0.190840 -0.076145 -0.260110 -0.398190 -0.259140 0.348760 -0.161920 0.116090 -0.229820 -0.229820 -0.051312 -0.039258 -0.048915 0.414290 -0.364990 0.068040 -0.397970 -0.351450 0.025956 0.495620 -0.251480 0.720180 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 1.462 1.462 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 0.000 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 1.462 1.462 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 0.000 9.128431 13.907825 1.992043 9.793927 4.750531 11.715102 2.876546 3.751024 8.552512 9.453354 5.717857 9.435804 6.400116 10.459951 10.251594 5.420876 7.832689 11.550894 6.216404 9.791936 9.769654 7.231171 11.918784 3.420873 9.561303 10.043973 2.198494 NA 10.872086 2.198494 12.378392 12.676241 7.386989 9.654632 9.980716 9.491264 3.846182 2.291604 NA 4.335983 7.638106 9.077862 8.411830 2.379066 8.195158 6.683910 9.659553 6.683910 10.619706 2.198494 14.059544 4.174239 3.783446 9.678344 6.616087 8.298619 9.200735 9.513783 9.472123 2.815145 13.420875 1.291604 10.692205 2.815145 9.839451 3.717857 8.778427 7.893363 13.550649 6.257377 7.799387 13.328710 9.733499 11.303693 6.771372 11.900309 9.084130 10.873960 12.932345 12.290535 10.250870 7.696733 4.198486 8.309792 11.660098 10.545439 4.481415 8.223807 8.480181 10.096933 9.454235 7.400116 5.510759 9.783946 6.850013 1.876566 8.482651 9.076791 12.809753 11.641564 8.315347 7.935448 8.955150 9.280277 10.358341 8.692471 10.062669 9.760725 12.418861 11.572363 10.289124 9.694071 NA 9.552506 9.226757 10.592516 7.423449 10.157828 10.228230 8.014399 13.393978 10.263854 10.729084 12.947793 10.297217 9.224545 3.649144 TCGA-A8-A08S 71 0 NA 1004 breast stage iia t1c n1 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 5 1 1 NA NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.81477e-07 10.6049418 10.2222106 11.6948634 9.7739368 8.7887448 8.9759866 8.9998182 8.4749491 9.2473149 13.5465911 12.1023356 10.6174378 3.2746195 15.3979894 4.0401560 8.5389086 6.4121261 8.7621943 12.3946874 14.1809368 4.8434664 14.3899912 5.3901002 9.3705468 11.3982265 7.9601891 -0.6321817 10.9695026 13.0971932 5.9676436 8.0366165 6.0819765 NA 3.5376564 9.8834316 10.6746479 6.2319181 10.7343272 10.1045564 11.6192142 2.4552023 9.6292391 14.4677575 8.3924561 9.4277522 11.1859145 12.0324013 4.5965476 3.1226230 9.1831150 12.2793110 0.3677065 11.3065762 3.9824460 5.4551957 4.5376564 10.1138261 11.6268865 10.2925442 10.6516883 12.6077032 8.4432109 11.0221440 10.9636302 11.3367585 11.0599114 5.3450131 11.5425014 9.9494032 -0.6321817 10.6534230 9.6755018 3.2827808 5.0115896 10.6989287 9.5899230 10.1706519 10.9683416 2.1750774 9.8065237 12.5093600 10.9986814 10.0603472 9.3065762 -0.7243900 0.1557700 0.1557700 0.0233640 -0.0056064 0.1754000 0.1481600 0.3938000 0.3601300 -0.7176400 1.4795000 1.4795000 0.0000000 0.0000000 0.1575100 3.6569000 -0.7186200 0.4429100 0.4191800 -0.3382500 0.9474400 -0.0725410 0.6485600 3.6569000 0.1866200 -0.1942500 -0.2155700 -0.2155700 0.4380100 -0.6877000 -0.7243900 -0.2501900 0.0252500 0.3071300 0.1754000 0.0431080 0.0451410 0.3938000 0.3601300 0.3601300 -0.5427000 -0.5445800 -0.7372000 -0.1042100 -0.1042100 -0.1042100 -0.0679900 0.0000000 0.0000000 0.1901000 -0.2927200 -0.7186200 -0.7186200 0.4429100 0.4975300 0.4975300 -0.3382500 0.9963400 -0.0725410 -0.6969400 -1.2929000 0.1866200 -0.0319020 -0.1942500 -0.2155700 0.3972800 -0.2509200 -0.2088300 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 0.054 0.710 0.000 0.000 -0.216 -0.216 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 0.000 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 0.054 0.710 0.000 0.000 -0.216 -0.216 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 0.000 7.66922807 12.83947049 7.75359451 10.01878354 3.48043317 10.83533735 0.36770654 NA 7.92615246 7.42301419 NA 7.12261889 1.95270631 10.18671336 8.99344057 1.82716865 6.16214759 9.12678783 9.23655432 10.63217441 9.03657257 7.91076384 10.21008209 0.68965699 7.33062741 9.44187331 2.36773449 -1.63218166 11.09501414 2.82716865 11.57321962 11.20831302 7.45254025 10.61980584 10.78795519 9.18950585 5.60613719 0.95270631 -0.04736823 6.72528445 8.43651001 9.83329825 9.72308290 2.17507743 6.72484396 6.31609867 9.73569242 7.38454029 9.36067022 NA 11.09968714 1.82716865 4.09565442 9.08918138 4.60766173 0.95270631 9.66579442 7.75574885 6.88343143 0.36770654 13.52357776 -1.63218166 10.47560273 -0.04736823 6.33927459 4.34501308 8.31901632 9.54639657 15.5687644 6.0115873 8.3131755 15.3979894 9.9657843 10.4250467 14.1809368 11.9505794 8.3873225 11.4085352 13.1184911 9.0286192 9.1831150 8.1226194 0.3677065 7.5376572 11.0992630 11.192691 7.171862 8.214789 9.465106 9.044570 10.236331 5.883433 3.689657 12.102336 5.967644 -1.632182 4.859587 7.656298 10.146220 9.752515 9.732862 9.320473 12.523103 4.321928 11.781966 6.231918 11.601801 9.736784 12.110041 9.528864 10.637735 8.571080 10.312810 8.522170 3.615663 11.306576 6.657750 10.148682 10.113826 6.982441 12.688603 9.520017 9.800274 13.056201 9.436510 9.680048 2.175077 TCGA-A8-A08T 64 1 3409 2830 breast stage iv t2 n1a m1 female 2002 NA no infiltrating ductal carcinoma NA NA NA 5 2 2 NA 3 1 1 2 3 1 NA NA 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 11.138853177 10.024121009 11.844002014 9.821495459 8.224812540 8.143954056 10.442957280 8.448808468 9.878711396 13.422944560 11.412458862 10.397409491 1.582556003 13.002344674 4.140557818 9.576284604 5.716414798 9.065479954 10.283384967 13.100830676 3.872070284 13.809574206 8.137148954 9.220987928 10.928334862 6.473330722 NA 9.781687070 10.137148826 4.435001779 8.264383953 6.908489898 NA 3.967223953 9.819371529 10.417908619 10.019040231 10.788217503 10.181232901 11.693695680 5.912479816 10.696880788 15.178956858 7.249032840 10.385255867 11.706968551 11.539178154 4.872065357 5.041992001 9.239977709 9.867962236 -0.002454669 11.018808848 6.951794086 5.193996408 4.872065357 10.262040097 11.882658294 10.566187072 10.846220466 12.736534186 7.796339476 11.532062534 11.593516991 11.333546055 11.147767899 5.207049472 12.307358051 11.928334862 -0.002454669 10.051975772 9.055589111 3.419835490 4.770189468 11.479228793 10.232015764 10.326646325 12.101103883 2.500088176 6.655808324 12.199210940 12.051410272 10.032854897 9.523770700 0.9069400 1.4946000 1.5734000 -0.0167040 -0.0391710 0.7218800 -0.0283550 -0.0124380 -0.0441440 3.6569000 0.0881130 3.5151000 0.0119580 0.0322810 -0.0042929 0.0019418 0.0019418 -0.0175290 -0.0173910 -0.0521260 -0.0339130 0.0471260 0.0461330 0.0461330 0.0461330 0.0603650 0.0603650 0.0490810 0.0555150 0.0270760 -0.0350460 -0.0255430 -0.0391710 0.8036400 0.7047600 -0.8598300 -0.0676250 0.0181950 -0.0441440 -0.0441440 0.0791590 -0.0125760 -0.8380600 -0.0274220 -0.0274220 0.0150280 0.0150280 0.0322810 0.0827650 -0.0042929 0.0019418 0.0019418 0.0019418 -0.0175290 -0.0173910 -0.0173910 -0.0521260 0.0120970 0.0296060 -0.7194200 0.0461330 0.0461330 0.6860800 0.0603650 0.0603650 0.0555150 -0.0042929 0.0869560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.218 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.218 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 0.132 8.3682851 12.5860779 7.7141315 8.8648764 2.4420942 10.5897431 1.5825560 NA 8.4800692 8.9891194 NA 10.0823572 2.7345687 9.9824907 9.3059366 2.6605636 8.1354425 9.4887825 10.0241210 9.7038057 9.7685201 7.9653041 10.3769759 1.5825560 10.3558824 9.6378424 3.1130670 NA 10.6954339 3.6605636 13.1064486 11.7102678 6.8346998 10.4304874 6.5623829 9.2455251 3.7345579 0.7345687 0.7345687 4.2952749 9.2431502 9.2478960 10.5044009 3.7701842 7.6624832 6.3956284 10.9715340 8.1165384 9.7811415 -0.5872727 11.3021390 3.1130670 4.0564882 9.6788534 5.7871529 4.6794238 8.4055734 7.9975973 7.0456297 0.7345687 14.1672616 NA 10.2690605 NA 9.0153339 3.9672240 8.1026329 9.2518388 13.633303 4.716415 9.182473 13.002345 10.222403 11.187216 13.100831 12.758733 9.098260 10.990064 13.089804 11.940601 9.239978 9.431531 -1.587273 6.993835 11.734563 11.109820 6.140556 9.230418 9.758595 8.145650 10.844892 6.207051 7.569982 11.412459 6.765781 2.997600 7.651039 5.745253 12.798767 10.844133 8.563791 8.394202 12.237295 5.967224 11.115704 10.019040 10.131168 9.826263 12.126666 9.879221 10.356615 9.189068 -1.587273 8.864650 5.990063 11.018809 6.536757 10.486107 10.262040 7.904568 14.588068 10.093873 10.403448 12.622088 10.439158 10.477041 1.412619 TCGA-A8-A08X 42 0 NA 1308 breast stage iiic t4d n3a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 4 3 4 NA 1 6 2 6 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 10.2090924 9.4980001 11.5772633 9.5986537 8.5311670 9.1862212 9.8285299 9.5543991 12.1401297 12.7800802 9.9438604 10.5868719 4.2643788 17.2886002 3.2643863 10.3787734 6.7562334 8.8809291 8.0813641 11.3104812 NA 9.4380574 8.3115045 10.2980511 11.3441984 5.0972695 1.5863084 9.6307025 11.8962395 1.2643563 8.7977102 6.9154325 0.2643563 8.5497827 9.6609851 10.1477874 9.3663561 9.6459234 9.9871878 11.1496954 2.5863084 8.0058474 15.7694631 8.0864733 8.9368058 11.2654366 10.3742109 5.6394203 2.0717284 9.4280299 11.3797492 NA 10.8001417 6.3411959 7.2587337 5.4141288 10.5364268 11.6548181 9.8642933 11.8192090 12.4064874 7.3465297 11.0817638 10.3026409 10.8721730 11.4780921 4.7238097 11.3043275 9.0342182 0.2643563 10.4274010 9.8698598 4.1268325 6.1098703 11.8587050 9.8035391 10.3564767 9.7227870 5.1470217 10.4374328 13.2810146 11.2964261 10.2452339 9.8827659 -0.152220 0.629780 0.661800 0.172610 0.335130 0.067948 0.260590 0.467410 0.038630 -0.477020 -0.477020 0.872090 0.455640 -0.111160 -0.136520 -0.136520 -0.136520 -0.256840 -0.123000 -0.479130 0.105550 -0.265400 0.285960 3.656900 0.020903 0.143250 0.143250 0.143250 0.264510 -0.149820 -0.152220 -0.150190 0.086171 -0.474590 -0.295440 -0.327740 -0.327740 -0.203980 0.038630 0.038630 0.120930 -0.189990 -0.477020 0.627150 0.627150 -0.266850 0.130070 -0.111160 -0.111160 -0.318400 -0.136520 -0.136520 -0.136520 -0.256840 -0.123000 -0.162080 0.284690 0.061126 -0.265400 -0.406410 -0.178660 -0.287500 0.127410 0.143250 0.143250 0.054945 0.205340 0.028341 0.322 -0.111 -0.137 -0.137 -0.257 -0.123 -0.479 0.000 -0.265 -0.151 -0.274 -0.288 -0.288 0.127 0.127 0.143 0.143 0.516 0.659 0.000 0.210 0.205 0.000 0.000 0.000 0.000 0.000 -0.475 -0.295 -0.067 -0.328 0.000 0.000 0.121 0.121 -0.171 0.306 0.566 -0.267 0.000 0.000 0.322 -0.111 -0.137 -0.137 -0.257 -0.123 -0.479 0.000 -0.265 -0.151 -0.274 -0.288 -0.288 0.127 0.127 0.143 0.143 0.516 0.659 0.000 0.210 0.205 0.000 0.000 0.000 0.000 0.000 -0.475 -0.295 -0.067 -0.328 0.000 0.000 0.121 0.121 -0.171 0.306 0.566 -0.267 0.000 0.000 10.2243823 14.6877261 5.1223621 9.7217612 4.2643788 11.5355515 0.8493588 4.2185797 8.7360555 9.5567020 NA 8.4354319 8.9973957 10.2359239 9.2784009 2.2643863 8.0652804 9.5051716 9.0092142 10.1690150 7.9618693 7.7602356 11.1055515 2.8324040 7.2127473 10.2010182 0.8493588 -0.7355236 10.9999364 2.8493388 13.7441606 12.5352597 7.8864319 10.1378245 8.4689514 9.8919143 3.7238097 3.5123027 NA -0.7355236 8.9332655 10.6822328 9.6263241 2.7238206 9.1676296 7.7319856 9.9648201 5.6219317 9.0125731 2.0717284 12.6667263 4.1223580 4.0717369 9.4239237 7.2255410 10.2002820 9.5170457 8.9208051 12.1069271 6.3624120 13.7766887 NA 10.4805199 1.2643563 8.8973757 5.0192660 8.3465292 8.6737712 11.499380 7.731986 8.990598 17.288600 9.808987 11.157303 11.310481 9.686445 8.807412 10.216394 13.128470 11.641591 9.428030 7.982057 1.849359 7.454205 12.127018 11.402972 5.493199 8.879090 9.105158 8.750210 10.237403 7.177270 6.740114 9.943860 6.230165 NA 7.281188 6.865706 12.605482 10.998667 8.789901 7.795762 9.388502 11.206162 10.421740 9.366356 10.473834 9.975187 11.179886 12.688678 11.018015 9.147023 8.035870 9.336794 10.708360 10.800142 8.628515 12.047379 10.536427 7.613109 14.118664 10.245948 9.798683 11.995487 11.540505 11.138978 5.834236 TCGA-A8-A08Z 76 0 NA 1217 breast stage iiib t4b n3a m0 female 2004 NA NA infiltrating ductal carcinoma NA NA NA 1 2 2 NA 3 1 1 1 4 4 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.774378e-07 11.01234554 10.36007342 11.82584202 10.03832451 8.30791116 9.06494319 10.31605996 9.94920953 9.97610611 11.89126318 10.07370805 10.39441232 6.21747308 12.61955077 3.99929651 10.30344697 4.61340199 8.74433335 8.97048529 12.37451033 3.02844539 13.30944259 5.47204580 9.43074587 10.74817096 5.01394010 NA 10.20356519 10.37504226 2.55451518 8.09366739 8.08328837 -0.03047188 4.98449821 10.03204214 9.95158911 9.78919306 10.98379916 10.10867120 11.91132745 5.96201219 10.64079235 15.37275800 9.11112550 9.71885135 11.82428476 11.55872917 5.08502517 0.70655265 9.60375225 10.85422549 NA 11.42127249 7.78972534 7.07807073 6.92374226 10.64755943 12.01302925 10.73635111 12.01291532 13.11415135 7.96766664 11.25031695 11.01173225 11.50206447 11.38511196 5.49310930 12.24246752 11.06164263 2.47204580 10.43749128 9.17248627 3.81185118 6.99560888 10.70510221 10.54413972 10.17003620 9.85524256 4.40695157 6.68379188 13.28945348 11.92240876 9.91499004 9.63251125 -0.00152430 1.10350000 1.11230000 0.00708260 -0.00636680 0.00485790 -0.01170300 -0.00241290 -0.00241290 0.85146000 0.85146000 0.01377200 0.01460900 0.01460900 0.01433000 0.01433000 0.01433000 -0.60352000 0.01656800 -0.01491600 -0.00609040 0.01289100 0.00624810 0.00624810 0.00624810 0.00332990 0.00332990 0.00332990 0.02188400 0.03439500 -0.00152430 -0.00912860 0.00708260 0.00485790 -0.00843850 -0.01170300 -0.01170300 0.02553100 -0.00241290 -0.00241290 -0.00857660 0.00291330 -0.61652000 -0.00221680 -1.17640000 0.01488800 0.01488800 0.01460900 0.01460900 0.01433000 0.01433000 0.01433000 0.01433000 -0.60352000 0.01656800 0.03679400 -0.01491600 -0.00152430 0.00589500 -0.59400000 0.00624810 0.00624810 -0.00069303 -0.00930140 0.00332990 0.02188400 0.00527490 -0.59273000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.38246883 14.17689105 8.73552285 9.89534792 3.42897314 10.28733561 -0.61550806 NA 8.20954256 8.35612708 -0.03047188 9.65429482 2.08501667 10.15813502 9.27332706 1.55449062 8.24100927 9.46806294 10.05568238 9.46473503 9.44322496 7.91206060 11.13256682 3.99929651 6.72887966 9.59403716 1.70650845 NA 10.50999713 2.38457483 12.73773053 12.06911319 7.78972534 9.96766649 8.33295090 8.95538808 5.60375095 2.47204580 -0.03047188 10.41421599 8.18871494 8.94968579 8.82233565 3.33878094 7.67404958 6.13947154 10.37539680 7.18224536 9.44999977 NA 11.45956138 4.87643836 3.47204580 9.65950344 7.12581432 1.70650845 9.85828940 9.31310206 5.02844097 NA 13.70904556 -0.61550806 10.03024213 NA 8.25956486 4.24256440 7.93533068 8.63724905 11.9940984 5.0850252 8.1659436 12.6195508 10.0565670 11.0100642 12.3745103 11.9861224 9.2087470 10.5557605 13.4969418 10.7104513 9.6037523 8.2503169 0.7065527 7.4425753 11.4425754 11.392312 7.204763 9.015761 9.032941 8.712136 10.714055 7.384583 4.554509 10.073708 6.390209 3.594035 5.632513 6.993172 13.626120 10.590377 8.971423 8.618203 11.817256 4.632513 11.384897 9.789193 10.278264 9.889403 11.452858 10.095390 10.535600 9.889899 NA 9.502090 4.165944 11.421272 9.014851 10.405997 10.647559 7.915965 14.017494 10.075891 10.398953 12.937013 10.775021 10.084590 1.191942 TCGA-A8-A090 74 0 NA 0 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 3 1 1 NA NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 3.121176e-07 10.4253517 10.5048920 11.7077119 9.7726540 8.8728106 9.0595048 9.8808995 9.6229263 9.6146349 12.5361416 10.4122561 10.2446214 -1.4092782 13.5270125 4.4735207 9.4673977 5.7608064 8.1777205 8.4962678 12.9848743 0.9128031 13.6118606 1.7608171 9.0777157 11.3134748 7.3390732 -0.4090866 9.6542757 10.5544993 5.0503101 7.6187863 7.5245715 -1.4092782 3.6783424 9.6049012 10.9321215 10.2161329 9.8803232 9.3607185 11.4672057 -0.4090866 11.0544050 14.4820710 8.8567536 9.6836379 11.3561668 11.6630133 3.6352784 3.5450788 9.8268948 11.1866044 -1.4092782 11.2019054 4.4488613 7.1569345 5.8482674 10.0307115 11.3687524 10.5717343 12.3936999 13.0242053 8.0129452 10.7220945 10.5397042 11.5401603 11.1384982 4.8576675 12.1105169 10.4589315 NA 10.5000237 9.3795991 3.2376249 6.4363701 9.4917475 9.9954900 10.3808217 10.5308271 0.5909134 5.8100497 11.8377697 10.5289900 9.7707897 8.5936955 -0.3270400 1.8836000 0.0276380 0.0000000 0.0000000 0.0066653 0.0249690 0.0256710 -0.7216300 0.5187400 0.5187400 0.4946100 0.0100060 0.0041632 0.0125160 0.0125160 0.0125160 0.0086135 0.0086135 -0.7214300 -0.6927800 -0.1557900 0.3531600 0.3531600 0.3531600 -0.0235660 -0.0235660 -0.0272610 0.3427500 -0.3336500 -0.3270400 0.0027745 0.0000000 0.0066653 0.0066653 0.0249690 0.0249690 0.0256710 -0.7144400 -0.7216300 -0.0069519 0.0000000 0.5187400 -0.6997800 -0.6911500 -0.6911500 -0.6911500 0.0041632 0.0041632 0.0125160 0.0125160 0.0125160 0.0125160 0.0086135 0.0086135 0.0143300 -0.7046900 -0.6927800 -0.1557900 -0.6803100 -0.6583600 0.3531600 -0.3234400 -0.0235660 -0.0272610 -0.3377900 0.0120970 -0.3536200 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.531 -0.149 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 -0.172 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.531 -0.149 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 -0.172 8.1493015 13.4766247 6.7507525 9.2765055 2.8425967 10.3111249 0.9128031 -1.4092782 8.2019053 7.2947843 NA 7.2164801 4.8576675 10.6256796 9.5566649 4.1144420 6.7201635 8.4046618 9.4788628 11.1178688 9.3715434 7.8946614 10.5505205 3.5450788 9.1377750 9.3482707 3.9484326 NA 10.8196993 2.3982409 12.1199451 11.8219518 7.5245715 10.4573868 9.7595528 9.1578860 3.3457654 -0.4090866 1.1758120 6.9128091 9.3136882 9.3247433 9.8262966 3.4977656 8.6082877 6.9615678 9.7905530 5.6461627 10.1193348 -0.4090866 11.5620649 3.1758439 3.0503101 10.0386923 6.1189826 3.8003305 9.4727593 8.8124677 5.2202371 1.7608171 13.1484042 0.1758120 10.2115587 -1.4092782 9.5624243 3.8003305 8.1026335 8.7633083 14.3674437 6.9440280 8.9082932 13.5270125 9.3763331 10.4716121 12.9848743 13.3896056 9.1290697 10.9716122 13.8805394 10.7114426 9.8268948 8.0847361 -0.4090866 7.3188013 12.0700293 10.433624 8.177721 8.794229 9.042092 10.224330 8.918590 7.401452 6.843545 10.412256 6.160737 -1.409278 6.515694 7.885341 10.854737 9.631170 8.828091 8.800334 13.068576 5.175844 11.757971 10.216133 9.698752 10.206510 9.367314 9.679006 10.087734 9.487970 0.175812 9.175956 4.568160 11.201905 6.730432 9.637323 10.030712 7.328973 12.754294 10.110517 10.567803 13.588325 9.805807 9.095700 1.175812 TCGA-A8-A091 61 0 NA 1004 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 1 5 NA 3 5 1 1 3 5 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 11.408586 10.325290 12.185500 10.402728 7.815154 7.565854 11.025455 9.168723 10.212838 13.412445 12.461767 10.463269 1.139600 12.968959 3.946946 7.987864 5.697585 8.594459 4.958351 13.701725 0.554638 14.851519 2.613532 9.024689 11.911995 8.489300 -0.445362 9.057790 8.428070 1.876566 10.022232 7.344703 7.062421 5.649144 10.216701 10.006868 10.319774 11.200585 10.371877 12.717437 3.291589 10.957816 15.131455 8.302048 10.813192 12.203808 11.940489 3.946946 6.724552 9.489300 10.693112 -0.445362 10.756138 10.680901 5.003085 5.024945 10.412607 11.819460 10.139589 11.090226 12.887083 8.007211 11.121632 11.290448 11.409365 11.796709 6.046480 12.054389 13.414646 -2.030325 10.127958 9.658351 3.294474 5.649144 10.138336 10.395667 10.628322 10.906486 2.361993 6.558378 10.993765 10.728720 10.601296 9.734536 -0.00830230 -0.00830230 -0.00553750 0.22762000 0.21823000 0.49165000 -0.05366500 -0.01560400 -0.01560400 3.65690000 3.65690000 1.47110000 -0.00968060 -0.00968060 0.49580000 3.65690000 -0.55897000 -0.00761010 -0.00692580 0.48069000 0.50361000 0.00000000 0.01056400 0.01056400 0.00138510 0.00175060 0.00175060 0.01614600 3.65690000 0.00041593 -0.00830230 -0.00830050 0.22762000 0.49165000 0.49165000 -0.02274400 -0.02274400 -0.01560400 -0.01560400 -0.01560400 -0.56366000 0.49909000 -0.56892000 -0.01147300 -0.01147300 -0.01147300 -0.01147300 -0.00968060 -0.00968060 0.49580000 -0.55136000 -0.55897000 -0.55897000 -0.00761010 -0.00692580 -0.00692580 0.48069000 0.50361000 0.00000000 -0.58316000 0.01056400 0.01056400 0.48096000 0.00175060 0.01614600 -0.01711600 0.49510000 0.51089000 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.929 -0.579 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.218 0.281 -0.569 3.657 0.000 0.000 0.172 0.172 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.929 -0.579 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.218 0.281 -0.569 3.657 0.000 0.000 0.172 0.172 8.4912643 12.0114942 6.1495724 10.0696691 3.7510245 12.0505647 1.9696755 NA 8.3095141 9.0963683 -2.0303245 7.2215011 1.2916036 9.6774543 9.2591065 1.1396005 8.0085827 9.8911330 11.3410322 10.0703263 10.2373694 8.4249914 11.2972166 3.9696663 11.2298484 9.8888997 2.4932374 -0.4453620 11.3403514 4.1594919 11.6036808 11.3194980 8.0438054 10.3748054 6.9296656 8.8944764 6.0518136 4.2550626 0.9696755 -1.0303245 8.4814164 9.6809006 10.5433111 4.4932246 8.6792563 6.6873407 10.4799336 7.6544126 9.5667853 NA 9.1002345 4.6278753 4.9121804 10.0364359 5.6038222 4.5843733 8.9303899 8.5880493 6.7312158 0.7770304 13.8166478 1.2916036 10.2425852 NA 7.1320555 6.2411270 8.1557781 6.6385489 16.258641 4.255063 8.923133 12.968959 10.181248 9.576069 13.701725 13.064855 8.545581 11.212689 12.353098 9.323913 9.489300 7.700983 2.724541 7.171787 12.663478 10.9294848 8.6008410 8.6126183 10.1800308 8.7665147 11.0086498 6.8088677 8.8545976 12.4617675 6.3662680 0.2916036 9.2417105 6.5826057 11.9999862 10.3737411 9.1213146 8.4833914 12.1116912 6.2915925 11.3934548 10.3197744 10.2140278 9.4182964 12.1427945 9.9798423 10.3103485 9.1168690 -1.0303245 8.6182464 5.9808913 10.7561378 7.4146785 11.4824044 10.4126074 7.7428362 13.5477712 9.8450293 9.5418904 12.1044913 10.0027427 10.3584885 1.6701152 TCGA-A8-A092 48 0 NA 942 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 6 3 4 NA NA NA 1 2 4 1 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.907385e-06 4.855162e-07 9.9587947 10.0449018 11.7076976 9.1031845 9.5182222 8.3186129 9.6519312 9.2393541 9.8382965 13.6894651 9.4144208 10.6702830 1.4050666 13.5445035 3.8789901 8.9022452 4.4639494 8.3746852 10.1603172 13.2715649 2.5570669 13.2597540 6.9040192 9.3211770 12.0675293 3.9630579 1.2351143 9.2372456 12.6937967 0.2351143 8.3950049 6.3172824 -0.1798415 3.4445876 9.7742926 10.9002475 9.4372575 10.8392236 9.7983300 11.4601905 5.1054979 10.1074239 14.6413886 8.2351900 9.1322229 11.1781979 11.9796522 2.6945682 1.5570424 9.3727654 10.7481210 NA 11.1284352 4.4445876 6.0993205 5.1539958 10.1618004 11.9463705 9.8364402 12.0988360 12.2811493 7.8933452 10.5306157 10.1654792 10.8606142 10.9935652 5.4543009 12.6154595 12.0690121 NA 10.1215924 10.6344117 3.2319699 5.2685579 11.1320337 9.8906645 10.5228461 11.5122758 1.4050666 8.9749144 12.5906913 12.3283862 10.4400105 8.6434634 0.7410000 1.4776000 1.4776000 0.0000000 0.4533000 -0.1522100 0.0189430 0.4331100 -0.0128340 -0.9880800 3.0079000 3.5301000 0.4723800 0.4723800 0.0111210 0.0111210 0.0111210 0.4007700 0.3785800 -0.4626900 0.3875000 -0.4578400 -0.4915200 0.9467000 0.9467000 0.0575110 0.8153200 0.4780400 0.8627500 -0.4528600 -0.4416700 -0.4322500 0.0000000 -0.1587300 -0.1522100 0.0189430 0.0189430 0.4331100 -0.0128340 -0.0092666 -0.1929500 -0.1329000 -0.9880800 -0.0679930 -0.0705070 -0.0705070 -0.0654470 0.4723800 0.4723800 0.0111210 0.0111210 0.0111210 0.0111210 0.4007700 0.3785800 0.3697400 -0.4626900 0.3875000 -0.4491100 -0.4717400 -0.4915200 0.9467000 -0.4624900 -0.5309300 0.4780400 0.8627500 0.4508800 -0.0062286 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 0.000 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 0.000 7.7973762 12.6858295 9.6041857 9.3311899 2.3276874 10.5937849 -0.1798415 NA 8.6676757 7.4901626 NA 7.6925144 2.2351450 10.3049192 9.4506667 1.9355729 6.0424889 10.3176154 9.7374683 11.0917538 9.2403091 8.2252378 9.6624466 2.0425043 9.9159327 9.6702830 3.7269838 NA 11.3987834 -0.7648857 12.5600877 12.0514174 6.9251319 9.8617554 9.2575015 10.0911701 7.8717580 -0.1798415 NA 6.1299506 8.3225965 9.0303617 10.7342322 1.6945682 8.4223991 8.2808932 10.0919482 7.2181273 10.1936864 -1.7646406 10.3836103 2.4050666 2.9900291 9.2569257 5.2931240 1.0425043 8.0977709 8.2519420 5.3436565 3.0931207 13.6802456 -0.1798415 10.1035704 NA 8.9013578 2.5570669 8.2602732 8.1223544 12.159833 7.657198 8.082191 13.544503 9.255030 11.203980 13.271565 11.357638 9.020586 11.130898 12.905845 11.985841 9.372765 9.168824 3.093121 8.759676 12.064856 11.1054984 6.0931143 8.3772409 9.3132846 11.0471104 10.5373670 6.0230357 7.2066774 9.4144208 5.6529855 1.5570424 6.9528100 9.3257028 11.4031790 9.5727555 9.5548058 8.9390373 11.7550157 4.1658718 10.6142819 9.4372575 10.4442824 10.2802107 10.8789899 9.1695618 10.8399186 9.1606880 NA 9.1970174 2.9355729 11.1284352 6.8498442 9.9626288 10.1618004 7.5948829 13.2954919 9.9394698 10.1673485 13.2529860 10.2767929 9.7017201 -0.7648857 TCGA-A8-A093 61 0 NA 546 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 5 5 3 NA NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 4 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.323542e-06 8.323135e-07 10.08140674 10.30274058 12.05635399 9.80462523 8.53428771 9.00030231 10.69612548 9.34473154 10.11542502 13.32917373 11.27785942 10.49295423 2.19572555 13.37881403 4.00306247 8.71927244 7.07134973 8.03581413 10.41867772 13.09360984 1.97331738 14.09436574 2.71028297 9.02407362 10.87970753 5.14324238 -0.61153490 9.09312358 9.18601690 2.19572555 8.35413961 5.93524993 NA 3.74590420 9.76448085 10.15032218 9.95155166 12.11542502 10.28468786 12.22203620 NA 11.89837782 14.86166484 9.90932759 9.35125155 9.34690815 11.67462444 4.95821165 3.14324646 9.42315437 12.27414714 -0.02664588 10.77637274 3.81462220 3.63628819 4.84778650 10.31909278 12.24283428 10.52662727 11.85290121 12.60396429 8.55953235 10.59689462 10.78586168 11.17237675 11.52197937 5.38835488 12.81179969 13.57601682 -1.61175535 10.03085843 8.98547681 3.04656091 4.69213702 10.11670121 10.28884497 10.15239767 10.14616209 0.38835488 7.86408893 12.52966434 10.93452645 10.72262876 9.16067015 1.1190000 2.0317000 2.0365000 0.5351800 0.5156900 -0.0197230 0.5415100 -0.0185070 -0.0185070 0.5316700 0.5316700 0.5316700 -0.0072421 -0.0027871 0.5381700 3.6569000 -0.5758600 -0.0162920 -0.0162920 -0.0161700 -0.0091450 -0.5690100 3.6569000 0.5173000 0.5173000 0.4624200 0.4624200 0.4816300 0.5512200 -0.0228260 -0.0176820 -0.0056921 0.5351800 -0.0197230 -0.0217270 0.5415100 0.5280600 -0.0185070 -0.0185070 -0.0189190 0.5299100 0.5299100 0.5316700 0.5371100 0.5371100 0.5371100 0.5371100 -0.0027871 -0.0027871 0.5381700 -0.5961500 -0.5758600 -0.5758600 -0.0162920 -0.0138840 -0.0094210 -0.0184860 -0.0091450 -0.5778300 -0.5747800 -0.5647600 0.5173000 0.0088755 0.4624200 0.4816300 0.5512200 0.5346500 -0.0077646 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.047 0.000 0.000 0.462 0.462 0.000 1.967 0.551 0.551 0.535 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.542 0.542 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.202 0.202 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.047 0.000 0.000 0.462 0.462 0.000 1.967 0.551 0.551 0.535 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.542 0.542 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.202 0.202 7.7370837 13.7238854 5.2463359 10.1141477 2.2952528 10.5660864 -1.6117553 NA 8.5645287 8.5595323 NA 7.8787652 1.9733174 9.4784679 8.8529012 -0.6115349 6.8104200 8.9040553 11.3853584 10.6867045 9.4129826 7.5304625 10.2133142 1.1957255 9.3425519 9.5253466 1.5582676 0.7102609 10.7990718 3.0322067 12.3208470 11.6681111 8.2338454 9.9362139 7.1892553 9.5639050 8.9060247 -0.6115349 0.9733541 5.9956858 9.1876371 8.7998664 10.6786624 5.1565382 7.2909717 6.6691260 9.7348691 6.8842108 9.7287620 NA 12.1188256 1.5582676 4.2709998 10.0165139 6.1360786 2.1957255 9.3176139 6.4811132 4.5781779 -1.6117553 13.7299785 0.3883549 10.3932781 -1.6117553 4.8146222 5.2212468 7.8600304 8.8891973 15.3496616 4.6737599 7.9505979 13.3788140 9.9133869 10.9887330 13.0936098 12.5773306 8.7337607 10.5975042 13.1971688 10.1000224 9.4231544 10.4668399 0.7102609 7.4624965 11.9710855 11.463166 7.985067 8.949643 8.977070 8.942944 10.690994 5.088795 7.550747 11.277859 7.240104 4.896151 6.558280 7.145579 10.289599 10.979176 8.764003 8.717030 13.162679 4.032215 9.515131 9.951552 10.427274 9.556401 11.527587 9.757408 11.167254 9.143243 NA 8.609943 2.911922 10.776373 7.671444 10.376330 10.319093 7.673758 13.985244 10.036263 9.700671 12.700104 10.631827 10.192083 1.710305 TCGA-A8-A094 75 0 NA 0 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 6 3 4 NA 1 3 2 6 1 1 NA NA 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.404326e-06 1.213791e-06 10.1227351 9.9503833 10.8253491 9.7608576 7.7388793 9.3708753 9.4503098 9.6697548 11.3602885 13.6926672 10.3877886 10.2744957 NA 12.2147074 3.0214620 8.4783737 3.8445865 8.1283816 6.8367270 12.1493616 NA 10.5872276 3.4084945 8.6148431 10.9251165 8.6179431 4.0759176 10.2393085 11.7696593 -0.6789955 8.5034211 7.3978423 NA 5.7804571 10.3783416 10.3640540 9.4859335 10.1154426 10.9787917 10.9241894 6.9430786 10.1766738 14.9176241 6.7766831 9.2473228 10.6642124 10.5813582 3.7133439 4.9934525 8.4321623 11.8028261 1.9060055 10.5268199 5.0214664 7.9283573 5.4909519 10.5790038 11.3965058 9.3871159 11.1215222 12.5897149 6.8984551 10.4315100 9.0493043 11.1825014 10.8960931 4.7804571 10.9653337 9.9458222 NA 10.1594428 9.4295511 1.9131862 5.3654196 8.3125486 9.8514330 9.5426138 9.7133441 2.1283924 7.2635415 12.0627043 11.3146727 9.4631338 8.9648829 -0.418940 -0.125650 -0.162430 0.371900 -0.422010 0.126220 0.484380 0.089833 0.483010 0.000000 0.153510 0.786760 0.753920 0.117100 0.073960 0.018086 0.068504 0.199210 0.199210 -0.339880 0.069221 0.117390 -0.477320 -0.477320 -0.460470 0.049052 -0.247810 0.068217 0.680100 -0.263130 -0.418940 -0.166720 -0.424410 -0.434210 -0.438440 -0.144530 -0.418400 0.089833 0.089833 -0.142600 0.136410 -0.086269 -0.161170 -0.413900 -0.413900 -0.413900 0.144120 -0.442120 -0.065464 -0.450520 0.018086 -0.442180 -0.442180 0.199210 0.199210 0.199210 -0.351690 0.179640 0.087517 0.245270 -0.482310 -0.477320 -0.430630 0.049052 0.024812 0.072954 -1.051300 0.221740 0.754 0.000 -0.414 -0.414 0.199 0.199 -0.352 0.000 0.117 0.129 0.129 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.270 -0.270 0.118 0.118 0.754 0.000 -0.414 -0.414 0.199 0.199 -0.352 0.000 0.117 0.129 0.129 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.270 -0.270 0.118 0.118 8.6785787 13.1885950 3.2279105 9.3735947 3.9746578 11.5936565 1.3210045 0.3210045 8.0523458 9.0145137 NA 7.9559102 4.6429557 11.7799459 9.2249085 -0.6789955 5.5498447 9.7987849 10.8203743 9.6631014 9.1343270 7.2810287 10.4758448 2.6429557 8.9756629 9.4922035 3.5689563 -0.6789955 10.0650196 3.2279105 11.9965427 12.6200916 7.7133439 11.4252978 8.6960662 9.2983066 4.2752231 2.7804571 1.9060055 4.4503073 7.9097413 10.4990690 10.6669863 0.3210045 9.6183328 8.2398901 9.7977729 7.4084894 8.8208727 0.9059670 8.3654209 3.0214620 3.8445865 9.7567803 6.1864510 7.5157834 8.4528837 9.4947038 9.4360704 2.7804571 13.6233086 -0.6789955 10.3399224 NA 8.0958137 1.9060055 9.2279172 9.4959523 12.0303755 7.3924892 9.5182434 12.2147074 10.0326936 11.2150865 12.1493616 8.4682318 8.9097413 10.5848828 12.4127926 7.3489326 8.4321623 6.3210261 0.3210045 7.0283857 11.5904456 11.004460 7.069220 8.432162 9.482159 8.197544 10.452954 7.121926 4.905991 10.387789 7.102386 2.642956 6.530480 9.245661 10.216602 11.077583 7.946736 7.828821 10.257665 8.405835 10.257893 9.485934 10.056583 9.365421 11.149163 9.227917 10.576055 8.704731 9.651944 8.649522 8.188305 10.526820 6.836727 10.618516 10.579004 7.021466 13.177258 10.266471 10.229419 11.811125 10.354450 9.121927 3.321033 TCGA-A8-A095 45 0 NA 1277 breast stage i t1c n0 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 5 3 2 NA 2 4 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-06 1.005712e-06 10.3000505 10.0563311 11.9535342 9.9155282 8.1601926 9.7018945 10.6106435 10.3133185 9.4886715 13.3131728 11.2819031 10.9026767 3.9781224 12.2748391 5.1410608 9.2659352 7.0692704 8.3264654 11.1534820 13.2631727 3.7024913 13.6317463 7.2127833 9.3487414 10.9844789 5.0544752 -0.5454029 9.7955231 10.5963482 0.4545971 7.6833793 7.4769284 0.7765252 3.6640163 10.0348189 10.7668761 11.2749388 12.6725938 10.5179554 11.7066344 9.0460828 11.8808251 14.8133833 8.9228383 9.2497478 11.6057355 11.3911983 4.2874501 1.9139904 9.6169516 12.9004159 -0.5454029 11.4950213 4.3614526 5.3734220 5.2619144 8.9524122 12.2354077 10.5741500 12.4278093 12.8608318 8.1428106 11.0158484 10.9685519 11.6014472 11.2346900 5.0544752 12.4518281 10.4907340 NA 9.7960792 9.2432787 3.3416015 4.8296010 11.4170950 10.6965435 9.6517772 9.8850130 0.4545971 10.9759154 13.1312337 11.9271243 10.2830936 9.6749387 -0.00599710 1.21270000 1.18740000 -0.00346270 -0.00346270 -0.00802440 0.37808000 -0.00830050 -0.00830050 -0.01188700 -0.01188700 -0.01188700 -0.00940890 0.00000000 -0.00747200 -0.00290910 -0.00290910 -0.00110870 -0.00173080 0.38221000 0.37578000 0.00263570 -0.00290910 -0.00290910 -0.00290910 -0.01931400 -0.01931400 -0.01931400 0.38006000 0.00610900 0.00110930 0.00041593 -0.00346270 -0.00802440 -0.00802440 0.37808000 0.37808000 -0.00830050 -0.00830050 -0.00830050 0.37759000 0.37759000 -0.01188700 -0.00857660 -0.00857660 -0.00857660 -0.00857660 0.00000000 0.00000000 -0.00747200 -0.00290910 -0.00290910 -0.00290910 -0.00110870 -0.00173080 -0.00173080 -0.25586000 0.37578000 0.00263570 -0.25322000 -0.00290910 -0.00290910 0.00000000 -0.01931400 -0.01931400 0.38006000 -0.00277070 0.00903120 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 0.107 8.190962 13.451343 7.072946 9.307870 2.441882 10.326081 1.776483 -1.545403 8.903709 7.476928 NA 8.096612 4.287450 10.075238 9.112772 3.846874 8.148047 10.160625 9.777615 9.814310 9.728205 8.564391 10.473108 2.172648 9.713715 9.786037 5.692966 NA 10.186304 2.261922 13.045557 12.065009 7.428975 9.931307 7.300050 9.048885 5.182482 2.261922 1.913990 8.472761 8.460185 9.087556 10.468581 4.520649 7.805212 6.851166 10.445019 6.846878 9.496904 -1.545403 12.220572 2.542035 4.182478 10.068336 6.275759 3.583844 9.045148 7.899575 5.739961 2.039524 13.582434 1.039489 10.060040 NA 8.266738 4.739961 7.364453 8.659131 12.054473 7.426104 8.769710 12.274839 10.620723 11.467010 13.263173 12.761121 9.387513 10.803289 13.240983 9.465088 9.616952 9.034819 2.542035 7.361451 11.636489 11.262519 7.825248 9.258683 8.839344 10.244094 10.711692 6.255461 9.088464 11.281903 6.493479 4.235918 4.993720 8.483792 10.167087 9.935855 8.326465 8.242463 13.054822 5.408756 10.385726 11.274939 10.384558 9.941395 10.459834 9.869774 10.573826 9.682176 -1.545403 9.344992 4.664016 11.495021 7.343304 9.821429 8.952412 8.047018 13.908892 10.057723 10.467883 12.957516 10.764605 9.737070 1.624475 TCGA-A8-A096 73 0 NA 0 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 5 5 2 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 10.78672883 10.38217796 11.79778010 10.35065978 8.09683215 9.67147915 10.58009412 9.59790655 10.32550402 12.25261600 10.79896520 10.55486144 0.06336488 12.56951836 3.44192164 9.42271951 7.22328063 8.34510758 9.51585632 13.14139315 3.41390544 13.56882378 7.19886244 9.99269721 10.11434607 6.51955763 -0.67346265 12.62580999 9.90198280 2.20091233 8.48883471 7.20908680 -2.25842515 5.43496843 10.07910299 10.48568423 10.88629864 10.71499904 10.18597838 10.90842873 -2.25842515 10.61223112 15.40931334 8.65975548 9.80991681 12.27815325 11.53701344 4.34139517 -2.25842515 9.32126836 11.38375845 -0.25859773 11.58373320 6.64234779 7.67369563 5.56802906 10.84427697 11.86390466 10.43757929 12.42770801 13.05956485 8.11434620 10.99975265 10.61789250 11.19539472 11.59644682 5.79132962 11.98055743 10.57476655 NA 10.56504732 9.05152573 1.20219828 6.85000551 11.02572684 10.26749120 9.86527921 9.45099572 2.98941153 8.61184590 13.24247852 12.26962990 9.98762784 9.86366191 0.00638710 0.62333000 0.62333000 -0.00055444 -0.01010800 -0.00609040 0.00471900 -0.00678130 -0.00678130 0.00485790 0.00485790 0.00485790 0.00198020 0.00791750 0.00666530 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.01113900 -0.00083160 -0.00083160 -0.00083160 -0.00415460 -0.00415460 -0.00415460 0.01684500 0.00638710 0.00638710 -0.00816240 -0.00055444 -0.00609040 -0.01542600 0.00471900 0.00471900 -0.00678130 -0.00678130 -0.00678130 0.00750000 -0.60226000 0.00485790 0.00138680 0.00138680 0.00138680 0.00138680 0.00791750 0.00791750 0.00666530 0.00666530 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.01113900 -0.61575000 -0.00083160 -0.00083160 0.00000000 -0.00415460 -0.00415460 0.01684500 -0.00332430 0.01209700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.60411841 14.01104611 4.37084082 9.95123910 3.69707320 11.11175983 0.32642230 NA 7.81963178 8.41479008 -1.25842515 8.34930158 2.38534820 9.99916359 9.19217690 0.91142315 7.40859299 9.19988775 12.57560642 9.47957334 9.68127338 8.12734335 11.26173142 4.39969064 9.29030298 10.08160939 0.06336488 NA 10.71230594 1.74148856 13.32729452 12.32779311 8.10561575 10.28741088 9.56643978 9.09407637 4.35619312 2.59946063 0.06336488 5.07239740 8.38262965 10.03466528 8.93130573 1.98939336 8.09585165 5.93130484 10.22856740 6.73016577 9.68069304 NA 11.55626381 4.59946063 3.87075925 8.75619202 4.96837650 4.24927846 9.73123043 9.53060707 6.22932066 0.54883115 13.76646920 0.54883115 10.09076228 -2.25842515 9.07575429 3.29607557 7.86689438 9.16879395 13.76652826 5.05436229 8.17819275 12.56951836 10.61353064 10.26308149 13.14139315 12.90379373 9.33253586 11.04683037 13.15613329 10.51996898 9.32126836 9.04469110 0.06336488 7.33206789 11.38025634 11.092696 7.090209 9.250266 8.471951 9.079660 10.050744 8.478728 7.365363 10.798965 8.044120 -1.258425 6.994146 6.634965 13.176142 9.942992 7.822059 8.288376 12.761289 6.284512 11.285669 10.886299 10.865441 9.786900 11.955724 10.127883 10.815455 9.691308 NA 9.748968 5.516267 11.583733 8.870764 10.508010 10.844277 7.900091 14.135525 10.080217 10.443437 13.262407 10.188564 9.972102 1.200944 TCGA-A8-A097 65 0 NA 365 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 3 1 NA NA NA 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 1.942065e-06 8.669932e-07 10.0786058 10.4016935 11.3491723 10.0669594 9.2723380 9.3608445 9.0944678 10.0366790 10.0731583 13.1555826 10.1496855 10.7695339 2.6436253 14.9880075 4.9274082 9.4504098 4.2899746 8.4181157 8.2363969 12.5726162 NA 12.3286686 4.1644484 9.4030084 11.4828189 6.9144689 -1.8799135 9.6362456 10.8892712 3.9014172 7.9873317 7.4863757 -0.8799135 4.0026935 9.9981041 10.4975348 9.2698002 11.9380361 9.7343028 11.3392217 2.5123786 9.9229734 14.9555485 9.2562240 9.6784642 11.2238327 12.4710614 6.5166582 6.8170207 9.2774002 11.3939944 -1.8799135 10.8859608 8.5080705 6.6119056 5.0507890 10.4948210 11.8117967 10.2833883 11.9224686 12.8595701 8.4204058 10.7402730 10.5658440 10.8900976 10.9483880 5.3392229 12.0555866 9.9394339 0.1200865 10.3261518 8.0684204 3.5449799 5.6357544 9.4809002 10.6507034 10.7573573 9.4988899 3.9014172 7.7439343 12.8542335 10.7955692 10.3536729 9.0720664 0.610220 0.776370 0.945470 0.333510 -0.012257 0.298190 0.330860 -0.329940 -0.407160 3.339900 -0.830980 3.656900 0.866520 -0.417510 -0.428330 3.172600 -0.432080 -0.419150 -0.051244 0.309530 0.477180 0.227000 -0.412340 2.987100 0.831760 0.836080 0.356750 0.946290 0.345830 -0.395300 0.610220 -0.129790 0.333510 -0.051181 0.292940 0.285170 0.262380 -0.329940 -0.374260 -0.735560 0.563180 -0.055364 -0.836480 -0.424290 -0.424290 -0.043941 -0.037082 -0.417510 -0.417510 0.229010 -0.457040 -0.422740 -0.404700 -0.419150 -0.051244 0.000000 -0.047019 0.477180 0.204570 -0.411350 -0.412340 0.787860 0.389820 -0.472890 0.261690 -0.051586 -0.041974 -0.045228 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.200 0.350 0.000 0.419 0.832 0.390 0.390 0.246 0.246 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.000 0.295 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.200 0.350 0.000 0.419 0.832 0.390 0.390 0.246 0.246 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.000 0.295 8.738439 14.524114 6.952943 10.320952 3.772825 10.566878 2.579494 0.705049 8.479803 8.476505 1.289952 8.781065 5.792478 10.267576 9.678474 3.329511 8.393849 9.586130 8.748499 9.428961 9.921798 8.210166 11.044309 3.901417 8.869923 9.792036 3.763911 NA 11.511431 3.289982 11.584982 11.683964 7.841152 9.532094 8.317270 9.724606 4.734764 4.269804 -0.294951 3.820496 8.438596 8.770207 8.778265 4.441981 8.340516 5.587659 9.820926 6.731077 10.344658 -1.879914 11.630817 2.874935 4.990419 9.245157 7.301504 3.763911 9.950172 8.503757 5.771104 0.705049 13.107672 1.120020 10.662601 -1.879914 6.631806 4.329504 8.621890 9.411224 14.9702850 6.3961783 9.2980956 14.9880075 10.2055256 10.6106534 12.5726162 13.0650854 8.8199466 10.3209518 13.0597701 9.7195011 9.2774002 8.3488720 -0.8799135 8.7693093 11.4614330 11.085296 8.216768 9.485282 8.340431 10.041522 10.122678 7.405456 4.927408 10.149686 7.708768 3.405461 7.210166 7.836153 11.752480 10.015628 9.595123 8.991188 12.085567 5.486377 10.948874 9.269800 10.993497 9.814846 10.316963 9.505376 10.774689 9.061101 NA 9.239228 5.377440 10.885961 8.649484 9.816712 10.494821 8.680415 13.913199 9.507532 9.842861 12.946353 9.629828 10.078968 -0.294951 TCGA-A8-A099 76 0 NA 304 breast stage x t4b n3a mx female 2009 NA yes infiltrating ductal carcinoma NA NA NA 5 5 3 NA 3 1 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 10.9456767 10.7731940 11.1628865 9.5250472 8.7005209 9.6935816 10.3231396 8.7917252 9.4308253 13.6227748 8.5772540 10.4109374 1.5498663 13.2669427 3.8717747 9.0055513 5.9730625 8.2949901 7.8552902 13.5170440 1.0904470 13.5548051 6.6139810 9.7147528 10.9290319 5.5082702 -0.9096885 10.7797617 10.2594043 2.0904131 7.2325255 6.0676989 NA 4.8848323 9.5343984 10.3586685 10.6004412 10.5592974 10.6312734 11.3061036 NA 11.8471837 14.4909315 9.2313254 9.5250472 12.3324765 11.7319062 3.9730602 6.8717784 8.1884509 11.5775052 -1.9094175 11.5554751 3.9973105 4.9973105 3.5166834 10.0974462 11.9829617 9.9980606 11.4817968 13.0951660 8.5722182 11.0202321 10.9567377 11.3768322 10.4263675 5.5822730 11.6158173 11.0748373 -0.3246357 9.8697279 8.2414355 2.0922074 4.5661515 10.4269255 9.6387592 9.7808534 9.2261282 0.4122938 9.7786692 11.7386641 10.6597998 10.2640961 8.5436896 0.57362000 1.59430000 1.58010000 0.03073200 0.02366200 -0.01422800 0.00471900 0.00081885 0.00000000 0.03383100 0.03383100 0.03059100 0.01279500 0.01279500 -0.00968060 -0.00968060 -0.00968060 0.00346870 0.00346870 -0.81597000 0.03480600 -0.02644100 0.02511000 0.02511000 0.02511000 0.00194180 0.00194180 0.00194180 0.05209900 -0.81614000 -0.83082000 -0.04360200 0.02366200 -0.01422800 -0.02016600 0.00471900 0.00471900 0.00081885 0.00000000 0.02048300 0.03510000 -0.82944000 0.04075300 -0.04102400 -0.78950000 -0.04642700 -0.04468600 0.01279500 0.01279500 -0.01436600 -0.00968060 -0.00968060 -0.00968060 0.00346870 0.00346870 0.00346870 -0.81597000 -0.82952000 -0.02644100 -0.81310000 0.02511000 0.02511000 0.00777830 0.00194180 0.00194180 0.05209900 0.02034300 0.02202400 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.764 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.764 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 -0.111 8.0122597 12.0539472 3.1778859 9.4474209 0.3169567 10.5302498 NA NA 7.5457460 6.7450544 NA 6.9673346 0.8977825 9.9452873 9.3276288 0.4122938 7.2350770 9.4589254 12.4953608 9.3787082 9.3281249 8.6218002 9.7904251 1.5498663 10.5369853 9.5762481 -1.9094175 NA 10.1320780 2.6753869 12.5518344 11.5275207 7.5333624 10.2235611 7.0358625 9.4095265 3.2998747 -1.9094175 -0.3246357 2.0904131 9.1265925 9.9225178 11.0396985 1.0904470 8.7616769 6.1672355 10.3050415 7.2528102 9.5061606 NA 13.3590705 1.8977825 7.0329328 8.8847453 4.8771455 -0.3246357 8.9950534 8.2925425 7.9201414 NA 13.5419842 0.4122938 9.5575150 NA 8.8725979 4.9483999 8.2067629 9.1745630 10.5169457 4.0676989 8.7707785 13.2669427 9.9280468 11.5847745 13.5170440 12.0927944 9.4385937 11.2195409 13.1714862 7.6678474 8.1884509 8.7654936 -0.9096885 7.9654005 11.4972882 10.9724887 8.3560337 8.2080622 8.2145401 8.8144722 10.3071799 6.5498509 4.3941986 8.5772540 4.8453044 -1.9094175 4.0446127 5.3322604 12.0451604 10.1255616 7.0387862 7.1963277 13.0248008 3.1348124 10.7130519 10.6004412 9.6995976 9.9460660 8.7908587 9.3838904 10.8687014 9.5590430 NA 9.3254519 3.1348124 11.5554751 4.4827386 9.1950175 10.0974462 7.1805308 12.7236412 9.4123469 10.6478826 12.9161727 9.5847744 9.7557549 -0.3246357 TCGA-A8-A09A 40 0 NA 304 breast stage x t2 nx m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 2 2 1 NA 1 5 3 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.60098e-06 6.935946e-07 10.3853904 9.8004279 11.5760181 10.7344303 9.5259119 8.6144699 9.6588133 9.9949045 9.4981583 14.7934468 11.4400554 10.9367313 0.4428639 14.1583732 3.6652677 9.2480822 4.4428772 8.8351933 9.4661683 12.7856913 1.6652563 13.3909997 4.7648026 8.7096625 11.2231422 9.2010991 NA 8.0203049 9.9539696 2.4428639 7.5824273 7.5373931 1.6652563 4.2502340 10.6644630 10.6963295 9.4990620 10.5587865 10.0070253 12.3621117 4.8351914 10.2356662 14.9946442 8.1255194 10.0152603 11.5428811 11.8017102 3.7158934 5.9559451 10.0234485 11.1963712 NA 11.3495160 5.4872709 5.9559451 4.7648026 10.4306136 11.6229922 9.5712999 12.1099874 12.8411742 8.1129420 10.7255783 10.3873879 11.3152943 11.0719289 4.6908026 11.9503402 11.1685261 NA 10.4895451 9.4105824 3.0286399 5.5017703 10.0630957 11.0465022 10.7689308 10.7037954 3.6652677 8.3557651 12.3271736 10.8837451 9.5409080 9.5522712 -0.1298400 0.4312400 0.0284740 0.3747800 0.4278800 0.1334600 0.7095400 0.7094400 -0.3839400 1.8882000 2.6499000 0.6791900 0.6292700 -0.1135200 0.3924600 0.4188100 0.4188100 0.1911600 0.1911600 0.0831910 0.8916500 -0.0399510 -0.3444700 0.4573400 1.0030000 -0.1654700 -0.1654700 0.3106400 0.4369800 -0.1298400 -0.1120800 -0.5011100 -0.3337600 0.0370690 -0.0208310 -0.4677000 -0.6242700 0.7094400 -0.3839400 -0.6689200 0.2794600 0.1413100 -0.3529400 -0.4277900 -0.3384900 -0.0073408 0.0577890 -0.1135200 -0.1135200 -0.1732300 0.4188100 -0.5650600 -0.2314200 0.1911600 0.1911600 0.2087000 -0.0890140 -0.3346900 -0.2436300 -0.1466700 -0.3444700 0.4573400 -0.3373400 -0.2483700 0.3106400 -0.0127200 -0.3459600 -0.0863920 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.204 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.000 0.000 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 0.000 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.204 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.000 0.000 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 0.000 8.8265803 13.4749790 6.5721590 9.9566034 3.7648026 10.9029904 1.1798295 1.6652563 8.1616942 7.8294570 -1.1420986 9.3844812 1.6652563 10.1548296 8.5035718 1.8579014 8.8844367 9.9407278 12.2202682 10.3666986 9.8624920 8.7065364 10.6178015 2.5583411 8.1707964 9.6612373 2.6652791 3.7158934 11.1985980 3.8121080 11.9196221 11.8141080 7.8968325 10.8624850 8.1317088 9.7700541 6.8004276 0.8579014 -1.1420986 -0.1420986 8.4689380 9.1375240 11.0855293 5.5993803 7.6591368 5.9240025 10.2198571 6.8802815 10.7752854 NA 10.1764562 3.1798454 4.2841810 9.5574599 4.3271484 3.6128007 9.3834341 8.7557589 5.9453759 -1.1420986 13.3909389 0.4428639 10.6111301 NA 9.8394806 4.6652677 8.7018346 8.6077827 13.131128 5.728277 8.761795 14.158373 10.534069 9.903673 12.785691 12.248620 9.120502 11.199710 12.736156 9.848017 10.023448 7.976854 1.179829 8.400945 12.892454 11.318113 6.891337 8.913196 8.561817 8.856504 10.480967 6.955945 8.627751 11.440055 5.086733 4.501770 5.516125 7.112517 11.934395 10.376566 8.105841 8.671695 11.372874 6.427769 11.587264 9.499062 9.822254 9.934061 10.904696 9.886510 10.755759 9.130543 NA 8.745408 5.585834 11.349516 7.202209 10.120595 10.430614 7.317345 13.360807 9.652329 9.753489 12.769961 10.128209 10.261458 2.317333 TCGA-A8-A09B 58 0 NA 365 breast stage iiib t4b n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 5 5 3 NA 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 10.2211432 10.3085318 11.8888641 9.4311541 8.7096339 9.0829660 10.7215867 9.4376903 10.0019747 13.5953252 10.2642738 10.5492046 3.1222751 13.2303752 4.0019733 9.4201939 7.1718993 8.4542606 8.5145862 13.0547199 3.7638152 13.6407254 4.0330000 10.4778949 11.5670354 4.6076972 -0.5215976 8.2873767 10.0958803 2.0633649 8.7156226 7.6025341 NA 3.2857721 9.8359648 10.0353976 11.7791943 12.1623943 10.4934793 11.8000590 8.9057254 12.2903894 14.7311151 9.0562852 9.7186079 11.7247080 11.5815366 6.2663162 5.6878669 9.2548458 12.2719145 NA 10.7938454 4.8707297 4.8182626 4.1222669 9.5241724 11.8520936 11.1075417 12.4200106 12.7063295 8.7060287 10.7045239 10.4500749 11.0624357 11.2305843 4.7821936 12.0283177 11.5347118 NA 10.5698481 9.2198798 4.4358619 4.6878669 11.1204644 10.2720161 10.3610558 9.8957378 4.7638152 9.1849088 13.5459732 11.3922371 10.5289416 9.2905901 -0.26741000 1.18730000 1.19470000 0.21530000 0.39413000 -0.40407000 0.43800000 0.34502000 0.34502000 0.43902000 0.43902000 0.43902000 0.15263000 -0.34056000 -0.35886000 -0.36352000 -0.36352000 -0.07641200 -0.07641200 -0.36420000 -0.07080400 -0.04441500 0.23519000 0.23519000 0.23519000 0.20900000 0.20900000 0.21299000 -0.00013862 -0.23667000 -0.26741000 -0.24423000 0.21530000 0.10818000 -0.39286000 0.43800000 0.43800000 0.34502000 0.34502000 0.34502000 0.19536000 0.21330000 0.43902000 -0.54159000 -0.54159000 -0.54159000 -0.54159000 -0.34561000 -0.00027724 -0.35886000 -0.36352000 -0.36352000 -0.36352000 -0.07641200 -0.07641200 -0.07641200 -0.86153000 -0.07080400 -0.02205800 -0.54964000 0.23519000 0.23519000 -0.34194000 0.20900000 0.20900000 -0.00013862 -0.26893000 -0.23594000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 0.000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 0.000 8.81044921 12.79469429 7.72871100 9.96976481 3.90635189 10.89098263 1.47840238 -1.52159762 8.59085236 8.76727872 NA 7.43412111 5.96222741 10.00637840 9.38605453 2.72632989 7.83596449 8.93784429 12.04077444 11.17971923 9.96987012 7.96021224 10.34684955 2.72632989 9.46922584 9.85018934 2.47840238 NA 10.83266212 2.93785282 11.97751119 11.60592351 8.12407115 10.27160962 7.50355228 9.65146524 5.68786694 4.38530678 0.47840238 2.47840238 9.36181967 9.31997711 10.18921919 4.23329755 8.95715197 6.42092699 10.58987451 5.93784341 9.67193817 NA 10.97576566 1.80033047 7.61026968 9.93406869 7.31392604 1.80033047 8.68664724 7.88992371 4.40915330 1.28575730 13.32635095 0.06336488 10.27647945 -1.52159762 8.44130876 5.66823829 8.14552411 7.86643017 12.5283464 5.5336942 8.2921942 13.2303752 9.6508403 11.1032082 13.0547199 12.9112808 8.8909826 10.7138287 13.1668270 10.6645270 9.2548458 10.5231484 0.8003305 7.6433194 11.5097694 10.956677 7.285767 8.785614 9.078326 9.152605 9.942606 6.565876 8.543156 10.264274 5.986208 3.835964 5.500780 6.983350 10.866161 9.967759 9.775902 8.495221 12.119448 4.285765 12.168040 11.779194 10.027235 10.005401 11.546519 9.879826 10.457123 8.908865 NA 9.173284 4.544504 10.793845 7.246597 10.256272 9.524172 7.196090 13.156408 9.794694 9.756281 13.008575 10.880092 9.642062 1.063365 TCGA-A8-A09C 69 0 NA 31 breast stage x t2 n0 mx female 2009 NA NA infiltrating ductal carcinoma NA NA NA 5 1 1 NA 3 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 3.467973e-07 10.8805404 9.6513034 11.2377592 9.6665903 8.2702280 9.4866516 10.1075296 10.1633771 9.4340245 14.2805112 11.5131433 11.0932234 6.4084894 12.3204228 3.3716564 8.5824499 8.3449789 8.1098615 8.8174525 13.4803124 3.8712227 13.7261302 5.1135838 9.3052743 11.3461663 9.7285979 -0.4864082 7.4938114 12.1340062 2.6011260 7.6532234 7.2415923 NA 2.6011260 9.8048425 10.6694387 9.3418083 11.8988601 9.8355998 11.6806194 2.2141248 11.9152180 14.2907729 7.5981612 9.2492277 11.4118952 11.0802016 3.7231216 1.8356007 10.2888705 10.7541650 -0.4864082 11.3115359 4.0986301 4.7990718 4.9894070 10.8384149 12.2402092 10.2184400 11.3687349 12.9727191 7.9081344 11.1012149 10.8348276 11.5959872 10.9888985 4.8535217 12.6810115 11.6932699 NA 9.7822138 9.3646398 5.2842365 4.7424913 11.5035984 11.0137667 10.5199979 10.8034025 0.5136929 7.8288213 12.2235095 10.6640537 10.0323249 9.5415778 -0.5356100 1.0521000 1.0964000 0.0072217 0.4876800 -0.5260400 -0.5714000 0.4132900 -0.5442100 0.5253800 0.5253800 0.5207500 0.0256710 0.0256710 -0.5603700 2.7266000 3.6569000 0.3670900 0.3670900 0.1813200 0.5460300 -0.5217400 -0.5334800 -0.5251200 0.0855100 -0.1508000 -0.1508000 -0.1508000 0.2869100 -0.5181500 -0.5356100 -0.1545200 0.0072217 -0.6305500 0.0132130 0.7614000 -0.5566700 0.4132900 -0.5442100 -0.5511000 0.0108420 -0.0015171 0.5102600 -1.1477000 -1.1253000 -0.1179600 -0.1144300 0.0256710 0.0269350 -0.5449200 -0.0065050 -0.5516600 -0.5635400 0.3670900 0.3588800 0.3588800 0.1813200 0.5460300 -0.5164800 0.0203430 -0.5308300 -0.5251200 0.0000000 -0.5123900 -0.1508000 0.2869100 0.0290440 -0.5219400 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 0.000 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 0.000 8.01550872 12.93126061 6.73284036 9.68859739 2.42056325 10.79878493 0.09868904 NA 8.84458871 6.96075495 -1.48640819 7.26186456 2.97309692 10.11822500 9.53603949 3.42056325 8.53187189 9.64488573 9.90007326 10.89359156 9.51537559 8.21757535 10.11683439 0.83560075 9.88272374 9.22705825 2.68360663 -1.48640819 10.67101874 1.83560075 12.59939319 11.89521472 7.51648641 9.37165273 7.12100193 9.57908792 5.42056325 -0.48640819 1.97309692 9.82712164 9.12192664 9.27854331 10.22361719 4.79907176 7.70394094 6.96488261 9.94203191 4.97310151 9.99193575 0.09868904 11.65514035 2.09862168 4.53604046 9.95284300 6.33939397 1.09862168 8.21757535 7.84010126 5.06826236 NA 14.46425045 0.83560075 10.68453571 NA 8.52210049 4.12838414 7.22791721 8.79791762 14.005042 6.128382 8.094873 12.320423 10.867466 10.878901 13.480312 11.448653 11.745343 11.170544 13.190015 11.782798 10.288870 9.283510 2.420563 7.752076 11.792992 11.0197314 8.1952792 8.6810897 9.4780126 8.0214664 11.1550146 5.2001708 9.0095269 11.5131433 5.7034967 3.0986385 3.6429557 8.5088877 10.2892821 10.2483814 9.4965013 8.8930500 11.9731034 4.2141093 12.6927800 9.3418083 10.7813363 10.1288416 11.1995156 9.9283570 10.7056563 8.3258491 NA 9.1987885 2.5136676 11.3115359 6.8712239 10.6390853 10.8384149 7.6117036 14.4992914 9.8635058 9.9320514 12.3032054 10.5794245 10.0725708 0.8356007 TCGA-A8-A09D 47 0 NA 1522 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 3 1 4 NA NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 4.508365e-07 9.2758631 10.1270708 11.7957689 9.8520895 8.3217834 8.5580556 10.3763317 10.2735282 10.0711699 14.5158367 10.3424259 11.0177661 2.3819755 12.1710102 3.8108235 10.0186029 6.4162486 8.2361276 8.0717074 12.2570778 2.0034583 13.2683783 3.1409749 8.9933551 11.2606187 8.7066780 0.2665167 10.5495894 10.1913135 3.6357312 9.7449335 6.9898781 NA 5.0034673 9.9294660 10.0489533 9.7469546 10.2953280 10.2182714 11.6339158 13.3179366 10.0813505 15.1434815 8.7977264 10.8719774 11.5865494 11.6028216 4.1733913 6.9715573 9.2138945 11.1151240 NA 11.1368657 7.1450630 6.1653552 6.0565770 10.4800103 11.4015690 9.9995164 11.6573865 12.6330965 7.3610182 10.7045998 10.1160729 10.8079204 11.5420436 5.0390901 11.5704720 10.6955590 0.6814942 10.3054200 8.8185298 3.2826474 6.2051012 11.2987764 10.2627391 11.2437809 11.5936794 2.3819755 7.8787554 11.9085527 10.9890240 9.7011293 9.2119450 -0.12733000 -0.12733000 0.00930980 1.17220000 0.01824300 0.01126100 0.00110930 -0.00166290 -0.02479800 0.00388540 0.00388540 3.42380000 0.49995000 -0.04292400 0.00388540 -0.05226100 -0.49923000 -0.01560400 3.65690000 -0.00609040 3.10250000 -0.00871460 -0.03435900 -0.55677000 0.93895000 -0.03585700 -0.03585700 -0.03585700 3.65690000 -0.12733000 -0.12733000 0.01978700 -0.53906000 0.01126100 0.01098200 0.00332990 0.00332990 -0.00166290 -0.02479800 0.00527490 0.00569190 0.00513590 0.00388540 -0.04251700 -0.04251700 0.44172000 0.00277450 -0.04292400 -0.04292400 0.00388540 -0.05226100 -0.53296000 -0.53296000 -0.01560400 -0.54179000 -0.54945000 -0.00609040 -0.45329000 -0.00429290 -0.00027712 -0.03435900 -0.54865000 -0.54623000 -0.03585700 -0.03585700 0.00000000 -0.03313200 -0.56744000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 0.000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 0.000 9.3932055 13.7060722 4.0738545 10.4213191 2.3941300 11.1224077 1.0034583 0.2665167 8.6152290 8.6983470 NA 8.9749873 5.1733913 10.0297133 9.0169289 2.8514592 8.0522257 9.6100568 8.0888063 10.9085527 9.5716357 7.1327496 12.0611877 2.0034583 6.3397503 9.4848624 2.4889006 NA 11.3026747 2.2664867 12.0594269 12.6787180 8.5426253 9.7703268 8.9282791 9.8101773 6.0213887 1.6815392 -0.3185058 0.2665167 8.7341067 9.3136250 10.3397500 6.2206975 6.2361271 6.8762959 10.3728459 6.3253954 10.1613189 NA 10.5914316 3.0034583 4.2962518 9.4900522 5.5944291 1.4888749 9.4808201 10.1270708 7.5549825 0.2665167 13.3589278 1.4888749 10.8233264 NA 8.6342796 5.7368213 7.9103573 9.5641815 12.8771860 5.9669403 7.8414096 12.1710102 10.0728466 10.3181632 12.2570778 11.8193302 8.2361276 10.8423554 12.5176875 10.1109452 9.2138945 7.7610233 0.2665167 7.9483252 13.0067737 11.394280 4.747629 8.857712 8.778254 7.551904 10.183525 6.976160 9.036890 10.342426 6.934204 1.488875 5.073855 7.893451 11.356613 10.625152 8.461258 9.591432 12.104786 5.266502 11.603952 9.746955 10.011895 9.783514 11.582217 10.621852 10.763688 9.283309 6.980746 8.939563 2.588421 11.136866 7.650205 10.451789 10.480010 7.495319 13.168311 10.650925 9.952418 11.831444 10.561887 9.670933 2.003458 TCGA-A8-A09E 73 0 NA 1492 breast stage iiib t4b n1a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 3 1 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.387189e-07 9.1480576 9.6365782 11.1060635 8.8826562 8.7719090 9.0948599 9.2580666 9.6110682 10.4703798 14.2877487 9.9643943 10.7801986 NA 13.7448380 3.0917844 8.9964924 7.6181997 7.2248150 8.3704498 12.9752658 2.0918014 13.8319534 4.0917929 10.2830057 11.1634955 8.7525957 -0.3677318 7.9632747 10.5952538 -0.3677318 6.5630956 5.0753016 NA 2.0918014 9.8665764 9.9441060 10.6825465 10.0643777 9.1191927 11.1184386 NA 10.2976937 14.5727631 6.3434398 9.6883180 11.7537294 10.9783173 5.9632753 6.1637382 8.4620805 10.3034564 -1.3677318 9.4856673 3.8802839 3.8802839 4.1242123 10.6906878 11.6321816 10.1060635 11.1156697 12.6908569 9.7622847 10.2603475 10.0835688 10.9105168 10.0887122 5.4397129 11.3731926 11.3142550 0.2173548 10.2243475 9.2580666 3.7257521 4.1559192 10.9674689 10.1724858 10.1191927 9.6498622 -0.3677318 10.0182202 13.1248995 10.0073972 10.6135682 8.5850989 0.79588000 1.35780000 1.48800000 0.49683000 0.54030000 -0.43588000 0.03524200 0.51560000 -0.53195000 0.61843000 0.61843000 0.99156000 0.40377000 -0.57851000 0.01195800 3.65690000 3.65690000 -0.00041585 -0.00041585 0.01810100 -0.05886600 0.30956000 0.39363000 1.30830000 0.42402000 0.32914000 0.32914000 0.32914000 0.47907000 -0.57723000 -0.54603000 -0.17787000 0.49683000 -0.75124000 -0.35738000 0.03115500 0.03115500 0.51560000 -0.53195000 -0.58711000 -0.08603000 0.03425400 0.61843000 -0.53946000 -0.53946000 -0.00304750 -0.13083000 -0.55870000 -0.56495000 0.01195800 3.65690000 -1.13020000 -1.13020000 -0.00041585 -0.00041585 -0.04410200 0.00073049 -0.05886600 0.52660000 -0.02096100 0.39363000 0.42402000 -0.54552000 0.32914000 0.32914000 0.47907000 -0.00401620 -0.12240000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 -0.577 1.538 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 0.000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 -0.577 1.538 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 0.000 6.9677485 11.9408390 5.1559192 10.2892295 3.8768607 11.2557821 3.2173238 NA 8.5865542 6.5088755 NA 6.4778473 4.1869442 10.5660484 9.4715616 3.5865486 7.0544220 9.5065706 11.1948387 11.1284625 8.5744176 7.1441106 9.2516606 1.9542708 10.8044727 9.9131285 2.8802937 NA 10.8372345 1.8022759 11.0628103 12.1671470 6.1161734 8.9832969 10.3534569 9.8725528 5.6435849 1.4397295 -0.3677318 5.0073974 9.4445350 8.2905691 10.5271755 3.7616363 9.8836390 7.2433825 10.7751031 4.3328010 10.1642265 NA 11.8758293 0.2173548 3.5865486 9.6140677 7.2590888 2.5392581 8.8707626 6.9361385 7.5150012 1.4397295 13.1833450 0.9542708 10.8469804 0.6323613 5.9632753 3.5392457 8.1984116 10.5934457 13.6563312 7.2135582 8.1141572 13.7448380 9.9497704 11.5959764 12.9752658 11.0260163 9.3208003 10.5616162 13.6153068 10.4182188 8.4620805 9.3353962 -0.3677318 7.8921008 11.3461739 11.1037790 6.9632741 7.9223769 8.9200702 9.6781173 10.1684932 5.1715151 7.6740171 9.9643943 8.4699857 0.9542708 4.4903391 8.2587968 8.6505578 9.1811796 6.5027220 9.1608118 11.0517913 4.6984463 9.5317750 10.6825465 10.3876626 12.9992263 10.8013432 10.7024787 10.6305956 7.4809808 -0.3677318 8.3644065 3.9542894 9.4856673 5.3602765 10.6114828 10.6906878 6.6323584 12.6329740 9.6869622 8.8743408 12.4457381 10.3431642 8.8122668 -0.3677318 TCGA-A8-A09G 79 0 NA 0 breast stage iiic t3 n3a m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 6 3 2 NA 1 6 2 6 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.172992e-06 1.560588e-06 9.8961235 10.1742944 11.9771108 9.5634966 8.3648359 10.0402264 10.9767822 9.9850848 10.6781655 13.0750829 9.9475643 10.4325438 0.2920749 15.6019983 2.5399529 8.2316129 4.3794962 8.0199543 7.2607003 13.0522337 4.6139618 11.8197549 5.6495867 8.7003634 11.8436216 7.0733929 1.8769982 11.7809532 11.4317448 2.7514637 9.7888873 7.0766681 NA 5.7182986 10.5929581 10.4038213 9.1296614 11.8182883 10.6424203 12.3286365 7.3391579 10.9723930 14.8636381 8.2468114 10.5579415 9.6462829 11.2107105 4.0469188 0.6140030 9.1800158 11.4869443 NA 11.7671336 4.6318842 6.8580879 4.4619607 10.1650930 11.7841371 9.4917058 11.6371615 12.7955488 4.9213887 10.3884192 10.0339218 10.2632178 11.4846346 5.0864484 12.4907088 10.0709320 4.2920308 10.0593904 8.7535129 3.0549179 5.3032620 10.7923775 9.5154320 10.2049228 10.2385743 1.0993625 10.3230454 12.4781478 11.5573556 9.9551468 9.8047740 -0.5624600 0.5367800 0.5367800 0.0025811 0.0055529 -0.5537700 -0.0136770 0.0146090 0.0146090 0.0181030 0.0181030 0.0181030 0.0034687 0.0034687 0.0023734 0.0052749 0.0052749 -0.5964300 -0.0019399 -0.5828400 0.0237060 -0.0080244 -0.5896000 2.5891000 3.6569000 -0.3189100 0.1653500 -0.0789430 -0.0202750 -0.3083900 -0.5720000 -0.2257600 0.0025811 -0.5537700 -0.5537700 0.0173180 0.0173180 0.0146090 0.0146090 0.0034057 0.0129710 0.0094064 0.0181030 0.0238470 0.0238470 0.0048579 -0.0034658 0.0034687 0.0034687 0.0023734 0.0052749 0.0052749 0.0000000 -0.5530200 -0.0019399 -0.0019399 -0.5530700 -0.0113570 -0.0080244 -0.5689200 -0.5896000 0.9436400 -0.5576700 -0.6108500 -0.6073800 -0.0202750 0.0033299 -0.0425170 0.000 0.000 0.000 0.000 -0.551 0.000 -0.553 0.000 0.000 0.000 -0.544 -0.546 -0.546 -0.558 -0.558 -0.240 0.000 0.000 0.535 0.000 0.000 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.554 -0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 -0.551 0.000 -0.553 0.000 0.000 0.000 -0.544 -0.546 -0.546 -0.558 -0.558 -0.240 0.000 0.000 0.535 0.000 0.000 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.554 -0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 9.0216543 11.1602774 1.7514637 8.6993014 4.2462333 10.9227557 3.2462256 NA 8.6484856 7.3500251 NA 6.2276121 1.7514637 10.0807519 9.0131328 4.8466237 9.2870941 9.9622472 10.7923775 11.2678815 10.3914339 9.1430018 10.3343769 2.6843475 9.2041745 9.5286457 3.7182959 2.1989341 9.7863892 2.4619476 12.7689696 13.3824355 7.3309527 10.0929335 9.0402264 9.7308254 7.0896952 2.6139559 0.2920749 3.1500072 8.3432426 9.8609397 11.2205519 4.0469188 10.0653747 6.4619590 9.3933527 7.1406570 9.7093587 NA 11.9366785 3.3364262 4.1746781 9.3723847 6.5023640 7.4519051 8.3213207 8.9030585 8.8418181 1.9924784 13.4462583 2.4619476 10.0909103 NA 8.3046580 5.5681568 8.0519218 8.4818579 12.507718 6.835065 8.109017 15.601998 9.893340 11.293090 13.052234 9.246957 9.210897 10.165862 13.046921 7.821464 9.180016 6.935890 4.935889 10.734459 12.160181 11.582340 8.131238 8.445586 9.052754 11.146707 10.518142 7.964459 8.233081 9.947564 5.246229 0.614003 6.899364 8.123942 12.241313 10.719608 7.823415 9.150015 9.826823 8.464461 11.816589 9.129661 10.649586 10.205297 11.853083 10.370851 11.002194 9.758620 NA 10.169697 8.257818 11.767134 5.658357 10.920023 10.165093 8.240401 12.898497 10.064761 10.881685 14.072291 10.033922 9.710940 3.684347 TCGA-A8-A09I 84 0 NA 1371 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 6 3 1 NA 1 6 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.017137e-06 9.363527e-07 10.3743797 10.1900738 11.2067924 9.2703911 9.1610991 9.3815438 9.3424725 10.4384438 10.2607693 13.9709029 10.9969341 11.1329462 -2.3204861 17.5108856 3.5624500 8.1676444 6.2797164 8.7738820 8.8874287 12.8418414 NA 13.7807334 0.2647166 9.4543647 10.7687580 4.5866927 -0.3201259 10.1146930 11.9703271 0.4871776 7.7526068 6.9205958 -2.3204861 4.1060719 9.8257363 11.2043459 9.3539965 11.4144080 9.8324059 11.1430731 -2.3204861 10.7228314 14.1570249 8.5041266 8.4446758 9.6332732 12.1230715 4.7132284 3.3802446 8.9019952 10.9329130 -1.3201259 11.0296383 4.1555388 7.3991933 5.3732898 10.6924287 12.1221646 9.8196752 11.8248606 12.9293991 7.8621984 11.2780894 10.6999160 11.2419273 10.7381342 4.8090851 11.9961564 8.6952192 -1.3201259 10.1681465 9.1417952 2.6335242 6.3415820 10.8040870 9.4995840 10.1105180 9.8106965 0.2647166 8.0039844 11.7463139 11.2400176 9.9477613 8.7519366 0.2969200 0.9875400 0.8951600 0.3833400 0.0260340 0.0250150 0.0372170 0.0228510 -0.3475700 0.0508190 0.6763400 0.7543300 0.2296200 -0.1260300 2.1319000 0.4076100 0.7021400 -0.2165100 0.3661800 -0.6655900 -0.2944900 0.0892720 -0.7100600 3.6569000 3.6569000 -0.3099600 -0.3099600 -0.3099600 0.5647200 -0.6888700 -0.6907000 -0.4005200 -0.7015400 -0.3228600 -0.3407900 0.0372170 0.0372170 0.0228510 -0.3172700 -0.3475700 0.1000200 -0.2950300 -0.0077482 -0.2918900 -0.2918900 -0.3012600 -0.2819200 -0.1260300 -0.1260300 -0.2927200 -0.0223320 -0.7131000 -0.7131000 -0.1033300 0.3661800 0.3661800 -0.2980400 -0.3344500 0.0892720 0.0468420 -0.7100600 -0.6978500 0.0243520 -0.2897600 -0.3099600 0.5647200 -0.2934300 0.0128800 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 -0.689 0.206 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 -0.689 0.206 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 0.000 8.0494015 12.5859902 5.9512661 9.2295889 3.0721230 10.8343058 -0.3201259 -1.3201259 7.9904172 7.7337299 NA 7.1386210 0.8497591 11.1096032 8.8929083 3.2647616 6.5158543 10.0011686 11.2668785 10.9952368 9.1902025 7.6223184 9.9941042 3.2945178 6.7431999 9.7361032 0.2647166 -0.7352834 10.4434316 1.9277448 11.8515283 11.6925160 7.2534514 9.7364418 11.0311576 9.2449063 5.9605743 1.7672734 -0.7352834 2.0017302 7.5470827 8.4313484 10.6236010 1.9277448 8.0111244 7.5655005 9.9597050 7.8989726 9.5095268 NA 9.4758439 3.2033735 3.3802446 8.7578550 5.7389867 5.6455893 8.9599950 8.7125387 6.9465905 -1.3201259 13.9731321 0.2647166 11.1237837 NA 8.2305508 3.5126946 8.1616035 8.1726590 13.320356 7.588197 8.669199 17.510886 9.517602 11.628171 12.841841 12.346749 9.574243 10.453356 13.407379 9.503569 8.901995 8.725564 1.139208 10.758122 12.087072 10.9747121 7.4823207 8.2972717 9.0886645 9.0079181 10.3485917 6.8244624 3.5624500 10.9969341 4.3663012 -2.3204861 8.7207788 9.2879434 10.0414738 9.9471761 7.6670682 8.9949539 11.5640701 6.6769838 10.7218842 9.3539965 10.0825499 10.0905206 11.1734095 9.2067924 10.5346726 9.2899061 2.2033578 8.3479801 6.4839351 11.0296383 7.7007844 10.3839239 10.6924287 7.5409688 12.9888897 10.0053907 9.7801380 11.5572800 10.3566428 9.0580989 0.8497591 TCGA-A8-A09K 68 0 NA 912 breast stage iia t1c n1 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 1 1 NA 2 5 1 1 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 10.9567803 9.5620113 12.3417307 10.0822091 9.5859638 8.6433999 11.1722453 9.3005862 10.5244943 13.4867709 10.2952689 10.8407927 NA 12.9370508 3.5620104 7.4128679 5.2303913 8.5938602 9.0989524 13.2106900 4.1122080 15.2114440 1.9245940 9.2868664 11.7906583 8.9005885 0.3395935 10.9726142 8.7059413 -1.2453690 7.4376514 5.6853936 NA 3.1469810 10.4706184 10.2079271 9.6742647 10.2012229 10.0475532 11.8016099 4.2465069 11.8834564 14.9898106 9.0073929 11.5368356 11.8038243 10.6001465 3.2782227 0.3395935 10.0995072 9.8010983 NA 10.1777723 4.9834771 6.6434002 4.3092417 9.4341365 12.0149880 9.2762568 9.9561678 12.9130295 8.2263317 11.0970090 11.0953495 11.0190990 11.6439703 5.6853936 12.3306683 12.0196854 NA 10.2253153 9.4944370 2.6625018 5.0945063 10.3306683 9.6971711 11.7269183 10.5903121 2.5620104 8.8592552 11.2460086 9.6357704 10.8996333 9.4411571 0.01405100 0.23303000 0.36838000 0.39612000 0.44122000 0.01070300 -0.09538400 -0.44848000 -0.43810000 0.75108000 -0.90107000 0.98783000 -0.01367700 -0.01615400 0.36723000 -0.44534000 -0.44534000 0.14414000 0.01698500 -0.40362000 -0.43929000 0.25730000 -0.45586000 -0.44145000 2.12360000 -0.05859600 -0.05859600 -0.05859600 0.36381000 -0.03245000 0.00069327 0.00000000 0.39612000 0.40794000 0.01028500 -0.43225000 -0.43225000 -0.43409000 -0.44129000 -0.44512000 -0.44814000 0.07742500 -0.94005000 -0.01725400 0.51612000 -0.01794100 -0.06665400 -0.01615400 -0.00664320 0.40144000 -0.44534000 -0.44534000 -0.44534000 0.00986690 0.00930980 -0.01078400 -0.43539000 -0.43453000 0.25730000 -0.46253000 -0.45586000 -0.44145000 0.38320000 -0.16841000 -0.05859600 0.31691000 0.32060000 0.38056000 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.317 0.317 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.922 0.004 0.000 0.000 0.000 0.000 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.317 0.317 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.922 0.004 0.000 0.000 0.000 0.000 8.692766 10.373959 5.293816 7.434137 4.623293 10.699002 1.562035 NA 8.407501 3.708849 NA 5.390702 0.754631 10.334444 9.380365 1.924594 7.922075 9.444654 8.894208 9.878131 10.019855 7.842120 8.320710 1.924594 8.526146 9.901861 2.924575 1.339594 10.287012 3.883943 12.079821 11.282378 5.496124 9.485976 7.332085 9.151261 1.076559 2.754652 -1.245369 3.214094 9.689822 8.805865 10.052146 2.076593 8.381844 7.081086 10.220223 7.782563 11.088650 -0.245369 9.790143 1.754674 3.799046 9.525461 6.125955 7.081086 8.316899 8.792203 7.697171 -1.245369 13.271157 0.754631 10.576430 -1.245369 7.578024 3.002577 8.855319 8.448144 13.275091 6.085573 8.723323 12.937051 9.855319 10.106148 13.210690 14.901762 8.272326 10.964719 12.412868 11.112483 10.099507 7.809939 -1.245369 8.430614 11.313795 10.782217 7.906941 8.919551 9.938292 8.414652 10.591799 6.618842 8.123163 10.295269 6.455095 3.076576 3.661544 7.489637 8.491059 10.544598 10.527383 9.343371 11.619616 8.226332 13.048232 9.674265 11.051859 9.443781 12.396144 7.720441 10.491481 9.181969 NA 9.094963 7.571640 10.177772 2.562010 11.309245 9.434137 7.373042 13.194033 10.124254 9.879424 11.260220 9.817377 10.435895 2.339622 TCGA-A8-A09M 75 0 NA 1006 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 1 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 7.976338e-07 9.45177901 9.43334424 11.20680223 8.59864398 9.36728981 9.57596594 9.75051489 9.04088750 8.72285090 13.06437898 11.11030249 10.19328029 3.15239437 12.88912801 3.03210084 8.15599001 6.65827862 8.23815248 10.47323350 12.49009896 5.10844500 12.90453432 3.93479954 9.49579568 11.23368486 8.54195462 -0.49146993 12.02483742 9.51134667 0.09356018 6.63781453 6.65827862 NA 4.48581321 9.70943022 10.09208465 9.26425375 9.25672457 10.08501601 11.17519953 0.83049873 11.41879961 13.97680569 9.77796227 10.28660882 9.94002929 10.89385484 2.90085715 0.83049873 8.92110155 10.78057823 0.83049873 9.42515756 5.30294776 6.40334954 5.23645052 9.68781884 11.85241137 10.21200276 10.46272801 12.90466815 8.40637723 10.52533992 10.34069778 11.06072045 10.71463027 3.75645758 12.43037260 10.79422284 -1.49126712 10.43742012 8.99837972 4.00230647 5.95147590 10.26758765 10.93846143 10.97026691 9.86112693 2.09349257 9.07648775 11.24746835 10.53988831 9.53089944 8.79508929 0.1536700 -0.1785300 0.7309400 -0.1757500 0.4288900 0.1149800 -0.0070576 -0.1680200 -0.6703900 0.1923800 0.1923800 1.7244000 -0.3362900 -0.0408880 0.1677500 0.1647500 0.1647500 0.1398400 0.1398400 0.5233100 0.1933000 1.4907000 -0.6395400 0.1757300 1.0986000 0.1303600 0.1700100 -0.2072200 1.3797000 -0.3802200 0.1536700 -0.6646700 -0.6591900 -0.3706500 0.3236600 -0.3509000 -0.3509000 -0.1680200 -0.6703900 0.3119300 -0.1893600 0.2139200 -0.6957700 -0.4745500 -0.3360600 -0.3360600 -0.1739800 -0.5170200 0.4376700 -0.1835800 0.1647500 -0.6571500 -1.0275000 0.1398400 0.0536640 0.0536640 -0.6634600 -0.6529500 -0.2923600 -0.6552900 -0.6420800 0.1757300 0.4361400 -0.3203000 -0.2072200 0.0038854 -0.0883740 -0.6521100 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 0.000 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 0.000 8.8134535 11.7317792 3.7179889 9.4146707 2.2634251 10.6009585 2.0934926 NA 8.6274726 6.7611975 NA 7.3382541 1.9679801 10.6624004 9.5752936 4.4858132 6.4510462 8.9812225 6.2767163 10.0783873 9.2831046 7.4886709 9.5658466 2.3158850 6.1451557 9.1541900 1.6784776 -1.4912671 11.1333271 2.0934926 12.3368665 12.2580869 7.0242310 9.8737605 11.2584011 9.4436968 4.3911766 2.6784551 NA 0.8304987 9.3888805 10.0217658 10.3942281 -0.4914699 8.9750670 6.7082038 10.3021350 4.9679617 10.2841420 NA 10.0698196 2.6784551 3.5529303 9.6135956 6.1200720 7.2193380 10.1658502 8.6557364 9.6803340 NA 13.7105407 -0.4914699 10.4865270 NA 6.5583809 3.9008475 7.7729743 9.0953714 13.7719931 6.7277000 8.9730774 12.8891280 10.3146785 10.5288171 12.4900990 14.2200642 9.0764877 10.2158908 12.1496803 10.6006281 8.9211016 7.7421511 0.5085301 7.8461535 11.3251154 10.91260878 7.30943179 8.61050740 8.72648930 8.86608362 9.80612440 7.01235748 6.15238829 11.11030249 7.32871083 0.09356018 3.09349257 7.77882687 9.22019861 10.24620154 8.83158657 9.28907134 11.08217885 8.13424045 12.50282499 9.26425375 10.18272395 10.40864372 12.37899273 9.36651259 10.75021699 8.33349037 NA 8.76268633 7.66840282 9.42515756 5.27671625 10.85836579 9.68781884 7.51724026 13.50637271 10.06743060 9.74813028 12.42692910 9.66334978 9.86937870 2.83045816 TCGA-A8-A09N 57 0 NA 31 breast stage iiic t2 n3a m0 female 2006 NA NA infiltrating ductal carcinoma NA NA NA 6 3 4 NA NA NA 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 8.669932e-07 10.159059 10.100050 12.198974 9.182002 7.558595 8.161260 11.471706 9.419337 9.018027 13.695918 11.247687 10.908634 3.125635 12.236380 2.611054 9.767326 4.585065 8.452964 9.038525 13.320454 2.803702 13.463704 8.234160 8.902437 11.373326 5.636599 NA 8.139098 10.977073 2.973630 9.011942 6.187411 NA 3.196025 10.459238 10.526942 9.301560 10.851172 9.242500 12.034779 -0.196277 10.673687 15.188323 8.852835 10.273350 11.314472 10.404085 2.504137 2.611054 8.790972 11.371664 NA 11.320885 4.051633 5.598124 4.932992 10.130699 11.602584 10.605012 11.045393 12.368572 6.891170 9.922000 9.775970 10.939417 11.800358 5.107487 12.084478 11.432381 2.504137 10.379720 9.235205 2.803702 4.734444 11.157957 9.318422 10.667507 10.342382 1.388686 9.901740 11.596905 10.377828 10.457896 9.159059 -0.2426500 -0.2426500 -0.0066432 -0.0237030 0.0000000 0.0702430 0.1333200 0.1389500 0.2073300 -0.7449900 -0.7449900 0.5364300 0.0655130 0.0619370 0.0607940 0.0895610 0.0895610 0.1284500 0.0957980 -0.7641500 -0.7276500 -0.1840800 -0.6976700 -0.6780200 0.1144800 -0.6440500 -0.2002500 -0.1743600 0.1813200 -0.2176300 -0.2426500 -0.6919700 0.0132130 0.3533200 0.0891270 0.0726320 0.0726320 0.1578600 0.9758500 0.1926900 0.1025300 0.0803120 -0.7582600 -0.7394100 -0.7394100 0.5770100 -0.2543100 0.0458490 0.0363230 0.1626500 0.0895610 0.0580810 0.0653700 0.1284500 0.1121300 0.1059800 -0.7380100 -0.6986600 -0.7551900 -0.6916000 -0.6976700 -0.6780200 -0.7374900 0.2145300 -0.1743600 0.1884400 0.1260900 -0.6859700 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.150 -0.150 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.150 -0.150 8.2955610 12.6214908 8.3621284 9.1335039 2.6110543 11.4982832 1.3886855 -1.1962770 8.8508316 8.3773550 -1.1962770 6.9174497 0.8037230 10.0699086 8.5569244 1.1256511 6.7285205 8.9304121 9.0468817 10.1868719 9.8454148 8.0204533 10.0076674 -0.1962770 8.9083064 9.3389830 3.6616926 0.3886855 9.7307449 1.6110779 12.3982656 12.0125517 8.0107222 9.3525297 8.6222898 9.1557513 1.6110779 0.8037230 NA 7.9885830 8.5485414 9.7180929 11.1140365 1.6110779 8.7704872 7.5850677 9.5702365 5.1435567 9.0867960 NA 10.5426444 1.3886855 2.2631246 10.0803323 5.7940961 2.3886580 9.1491130 8.0349288 10.4529638 NA 14.5187849 1.1256511 10.2641637 NA 6.3194084 4.5316310 7.9355646 8.3697618 13.471735 5.388672 9.058736 12.236380 10.016204 10.868787 13.320454 12.977775 9.381136 11.083318 13.015216 9.642124 8.790972 8.167843 2.504137 7.555252 11.813711 11.458791 6.722571 9.749152 9.296562 8.744755 11.104135 6.152435 9.084478 11.247687 6.598124 -0.196277 2.611054 7.909538 9.871142 9.949003 7.388670 9.099477 12.048963 5.125635 11.900686 9.301560 10.005219 10.319900 10.245614 9.902398 12.087953 9.714350 9.877849 9.972668 4.826076 11.320885 5.901741 10.179833 10.130699 7.757904 13.622190 10.402691 11.017723 12.034779 9.938776 9.256978 NA TCGA-A8-A09Q 83 0 NA 761 breast stage iiib t4b n2a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 3 4 NA NA NA 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.462261e-06 7.282743e-07 10.1790463 10.0217869 11.7987322 9.5496451 8.4254304 8.2505206 9.7316243 9.5677926 10.0700002 12.5128125 10.5665483 10.6322473 0.7098200 11.9709662 3.9114423 8.8452642 5.9424723 8.4005080 11.7299581 12.7705075 NA 13.2461559 0.9728397 9.4425419 11.4600161 6.9309147 2.0883112 12.6389960 9.8802374 1.8473155 8.6893795 6.5677918 0.9728397 5.7277326 10.0638405 10.2172097 9.9280115 11.2682323 10.7232738 11.2370931 2.5578022 11.0521085 14.9009942 8.8308061 9.3991106 11.8412827 10.9219431 4.6916626 5.0743855 9.8088963 11.1591666 -1.6121963 11.0536634 5.2458645 7.5603107 5.7972750 10.1729271 11.5011373 10.1498501 11.3145501 12.8799870 6.9915094 10.1486034 9.8661778 10.9986777 11.4407911 4.8178330 12.5507468 12.5249546 -1.6121963 10.0554385 9.7081200 3.2463625 6.7188000 9.0943794 10.1847343 9.9643677 11.4957544 2.5578022 7.3906986 12.3126032 10.9709662 10.1225930 8.7940883 -0.0542860 0.4208300 0.4790700 0.9676100 0.9049200 -0.1741100 0.6636400 0.6831000 -0.3362900 0.2180600 -0.0579240 2.8625000 0.2133000 0.2133000 0.2262300 0.8055800 0.2259200 1.0063000 1.6333000 -0.5677300 0.0287630 0.0097276 0.0086135 -0.0655810 1.1221000 -0.0915520 0.4407100 0.4407100 0.0884160 -0.1218800 -0.0542860 -0.2864400 0.9426200 -0.0110600 -0.0761490 0.1695600 -0.2901100 -0.0395290 -0.6249300 -0.0604800 1.2009000 -0.5886300 -0.8541600 -0.3036900 -0.3036900 -0.3162200 -0.2892800 0.2133000 0.2695400 0.2262300 0.2262300 0.2259200 0.2259200 -0.2881000 -0.5725900 -0.5628800 -0.5691200 0.0287630 0.0000000 -0.5353100 -0.0189090 -0.0655810 -0.3001600 -0.1126000 0.4407100 -0.8657000 3.6569000 0.8882600 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.289 -0.289 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 0.177 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.289 -0.289 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 0.177 9.4905154 12.3683801 3.7802051 9.3252573 4.8473155 10.0303864 3.7454310 NA 8.5325418 7.9671992 NA 7.3685370 1.3878588 9.7694265 8.8737126 1.3878588 9.3565503 9.2620965 11.1488113 10.4099044 9.0311534 8.2176064 10.0922195 3.6732850 10.8326395 9.4693669 7.5653032 -1.6121963 10.5979459 0.7098200 13.6907365 12.0900561 7.2427521 8.8130994 7.9539374 9.5584345 7.5900076 2.0883112 -0.6121963 1.1952216 8.6570100 9.2834588 10.1749697 4.3420782 8.2500250 7.6893795 10.3274627 5.7715872 9.4878887 NA 10.4580044 4.2705289 3.5578144 10.0277804 7.4107507 7.7366116 8.8666530 10.2290547 9.3486095 -0.6121963 14.1613833 0.3879139 10.2731985 NA 8.6847998 4.5777068 7.9424723 8.7243900 13.678956 5.557808 8.480641 11.970966 9.437051 10.753932 12.770507 12.115910 9.310468 11.609286 12.819250 11.952033 9.808896 8.800453 -1.612196 8.139428 10.776977 10.6796297 6.2520693 8.5439664 8.7131889 8.9347780 9.9221815 7.3794052 5.9114447 10.5665483 6.5376300 0.3879139 3.7098089 7.6376371 10.6908079 10.2012638 9.1469393 9.0181507 16.6420678 7.7887627 12.3065334 9.9280115 10.3241533 9.9975239 10.9082566 9.8261555 10.1903998 9.4329605 0.7098200 8.8912023 8.2597885 11.0536634 6.6405486 10.6721292 10.1729271 7.7054091 14.3447814 10.1643165 10.6295687 12.1877721 9.9544133 9.3355203 3.6358124 TCGA-A8-A09R 82 0 NA 273 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 1 1 NA 1 5 1 2 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 2.427581e-07 10.9654728 10.7966637 11.7511236 10.2594663 8.9558867 9.3353631 9.5084277 9.7363490 9.9164629 14.1437508 10.5831552 10.4923722 -0.2115649 13.6022832 4.0363978 8.7270682 5.0236856 8.1591559 6.3633779 13.0152320 1.6629346 13.9078961 1.0108514 9.2540349 11.4723404 7.9449732 NA 12.4429756 9.3557909 5.9848650 8.4419109 7.1043734 0.2035144 4.5785463 10.1208782 10.4664817 10.0968076 10.6508477 10.1305433 11.6657527 3.2909699 7.9399083 15.1343820 9.4150781 9.7152587 11.3077772 12.5226842 5.5163903 6.5785448 9.3765585 10.8264730 NA 10.8945953 4.6464507 7.1013517 4.8182166 10.5706477 11.6768313 10.0707848 11.5526491 12.8581421 8.8246422 11.3074495 10.8480000 10.9218249 11.0624584 5.7192053 12.1769344 10.8585895 -1.7963603 10.4894861 9.3302106 2.5326411 5.7504002 10.1868560 10.3535706 10.7132811 10.2819905 5.8545568 7.7959630 12.0832808 10.4912185 10.8170654 8.7647940 -0.4260400 1.2418000 1.1864000 0.2287000 0.2101100 -0.4098100 0.4778700 -0.2227300 -0.2227300 1.8379000 -0.1451500 0.7836900 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.4385400 -0.0051227 -0.0165670 -0.0072379 0.6877500 0.0199230 1.0426000 1.0426000 1.0426000 0.0216030 0.0216030 0.0216030 0.4337800 -0.4260400 -0.4260400 -0.0019399 0.2287000 0.0523830 -0.4098100 0.4340200 0.4340200 -0.2227300 -0.2227300 -0.2227300 0.0441480 0.0087528 -0.6401000 -0.4023000 -0.4023000 0.0482620 0.0482620 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.4385400 -0.4385400 -0.0051227 -0.0034627 -0.0034627 0.0000000 -0.4298100 0.0199230 -0.4109100 -0.4264800 1.0426000 0.3124100 0.0216030 0.0216030 0.4337800 -0.4383200 -0.3985300 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.667 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 0.000 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.667 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 0.000 8.7103095 13.8632233 8.6433371 10.0513464 3.8137915 10.2516524 0.7884351 -1.7963603 8.2230967 8.5915235 NA 7.3595387 4.7113022 10.5313393 9.1957364 3.5254300 6.8328622 9.9470783 12.1725328 10.1793540 10.1961930 7.8237258 10.7013579 3.5254300 9.4975523 9.7363490 1.3734533 NA 11.2742979 1.5254174 11.5231782 11.6254394 8.2203145 10.5180893 8.6933542 9.1312841 7.7348877 3.0614824 0.2035144 5.2587903 8.4912186 8.6863139 9.4969778 2.1103967 9.7398213 6.6670306 9.7875289 6.7152592 10.1518733 NA 11.0892024 3.5254300 6.4702928 9.1522237 6.9112446 4.0614911 9.5952868 8.7561753 6.0044070 1.2035144 12.8445417 0.7884351 10.2560741 NA 8.5731033 2.5254425 8.4359269 9.1118988 13.364008 6.561059 8.262850 13.602283 9.856454 10.785883 13.015232 12.931852 8.650589 11.043694 13.341858 8.903079 9.376558 8.640217 -1.796360 7.827388 12.741756 11.3540467 7.7523278 8.4538044 8.6649855 9.7348876 10.3826501 7.5936750 7.6065177 10.5831552 7.0108615 2.7270709 8.9633944 7.6133423 11.2408814 10.3269808 8.5388962 9.2628505 11.6505893 6.0427100 10.7558534 10.0968076 10.0669180 9.2020964 11.4166103 9.6396970 10.7542528 9.5333025 -0.7966109 9.2041258 5.1342415 10.8945953 8.5422426 10.4238844 10.5706477 7.7506896 12.4094520 9.7265779 9.6716210 12.9647976 9.9483399 10.1850734 1.2035144 TCGA-A8-A09T 68 0 NA 579 breast stage x t1c n0 mx female 2009 NA yes infiltrating lobular carcinoma NA NA NA 5 5 2 NA NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-08 10.5888030 10.0203161 11.2935982 9.2017233 8.5077697 8.5954160 9.7535636 9.4505628 8.9220280 8.6613299 10.3833714 10.4342610 3.1123332 12.6136273 3.3533374 9.6641287 5.1123332 8.1842828 9.3602605 13.0208620 5.0104531 12.8292303 7.4602560 9.4620906 10.8070866 5.6529023 NA 11.8144426 10.7988334 1.2378696 7.5046506 7.2676116 NA 3.3533374 9.2094073 10.2740374 10.5101048 7.1286347 9.6669218 10.9966423 9.9849379 11.3662878 13.8606783 7.8914970 9.6500808 11.5976134 11.2908846 3.1123332 2.4602445 8.9102892 11.8430346 NA 10.0027354 3.1123332 5.5836394 5.2676107 10.6222879 11.5435456 10.7423518 12.0470960 12.9301887 7.4210853 11.2194311 10.9608022 11.0164886 10.5522582 4.0452158 12.2831684 11.1230518 NA 10.2639261 9.4243908 NA 5.6529023 10.9161705 10.4186018 9.8538000 10.3463883 -0.3470317 8.5567831 12.3617697 12.2437223 9.5865919 9.2132343 0.0171240 0.0171240 0.0171240 0.0186630 0.0035368 0.0000000 0.0111210 -0.3339900 -0.3433600 -1.0488000 -1.0488000 0.9700800 0.0349590 0.0239100 -0.3034100 -0.3034100 -0.3034100 0.0484040 0.0157270 0.0295700 0.0189430 0.0207630 0.0404680 0.0404680 0.0404680 0.0311550 0.0311550 0.0311550 0.0620800 0.0363700 0.0171240 -0.2957900 0.0111210 0.0315770 -0.0015243 -1.2929000 0.0174040 -0.3339900 -0.3339900 -0.3269300 -0.0066432 -0.0055375 -1.0805000 -0.3021600 -0.3021600 -0.3021600 -0.3021600 -0.2921300 -0.2639600 -0.3034100 -0.3034100 -0.2963800 -0.2963800 -0.7457700 0.0157270 0.0157270 -0.0047079 0.0189430 0.0041205 -0.7177400 0.0404680 0.0404680 0.0221640 0.0146090 0.0311550 0.0512450 -0.0063668 -0.7008200 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -0.079 0.970 -0.302 -0.302 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -0.079 0.970 -0.302 -0.302 0.000 0.000 8.4698848 13.2831685 11.1336915 8.7509334 2.9442025 9.8972652 NA NA 7.5836387 8.0958448 NA 7.0875297 3.1123332 10.4334411 9.2036480 NA 5.6529023 8.8228264 10.2237057 10.5062109 9.2602687 7.3533409 10.2877124 3.8228219 9.9008288 8.8936926 5.6070965 NA 10.1968997 2.8228321 13.1157870 12.0838765 6.6415865 10.1347007 7.9838185 9.2284407 5.0452202 NA NA 8.5657906 9.3842204 9.2676112 10.0071508 2.4602445 7.4616726 6.1447541 10.9938641 6.8026482 9.3825220 -0.3470317 9.2546722 NA 3.3533374 9.6269717 5.7926576 1.2378696 9.6358949 7.2074898 3.3533374 2.2378696 13.9338895 0.6528765 9.8152927 NA 8.3909935 2.8228321 8.1326817 8.7350503 12.899373 4.862357 8.610003 12.613627 10.168601 10.549234 13.020862 12.294953 8.864790 10.973138 12.739038 8.737710 8.910289 8.180378 NA 7.332381 11.146757 10.623726 6.434261 8.871997 9.215144 8.900615 9.738931 6.832810 2.237870 10.383371 6.267611 4.353344 6.407790 5.128636 10.775729 9.835296 8.935990 8.647255 11.047900 1.974823 11.874156 10.510105 10.576229 9.407789 11.188663 9.595416 9.879314 9.032280 NA 8.740921 2.822832 10.002735 7.641586 9.867221 10.622288 6.010453 14.239682 10.579939 10.243488 12.656946 10.820319 8.986057 NA TCGA-A8-A09V 51 0 NA 457 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating lobular carcinoma NA NA NA 5 5 2 NA NA NA 1 4 NA NA NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 11.1811328 10.3184033 12.2860454 10.3669712 8.1030354 9.2825464 10.9492278 9.7033051 9.4865324 9.7574709 7.8736533 10.8270307 5.8514967 12.6373460 5.1596171 8.6301058 8.0987006 8.6947148 10.3964058 13.4785961 5.9890005 13.6528277 6.4364584 9.5295953 10.9860696 5.0076171 -1.8624965 10.4107407 9.1230930 3.5295711 8.6657051 7.0650294 -0.8627588 5.0198931 10.3539970 10.5268824 10.9762579 13.2930180 10.7822339 12.0990625 12.0801321 12.7119037 14.7340669 9.3239658 9.6613030 12.2049375 12.0249477 5.3564185 2.3851825 9.4804368 12.4783529 0.4592218 11.0874424 3.6918356 5.6129835 4.6608146 9.9546344 12.5535868 10.6754400 13.1520562 13.4661363 8.4341674 11.3495954 11.4742066 12.1673147 11.9313623 5.7883020 12.8051388 11.9485254 -0.8627588 10.2260393 9.0950786 4.4783441 4.7222146 10.8357387 11.1582310 10.6403314 10.5632537 2.5966728 7.4226535 12.9909992 12.1064577 10.0369856 10.0676188 0.00402430 1.26050000 1.26050000 0.00055459 0.00041593 -0.00055444 -0.00360110 -0.00691950 -0.00691950 0.00000000 0.00000000 0.00000000 0.00416320 0.00416320 0.00249690 0.00249690 0.00249690 -0.00387790 -0.00387790 0.00583090 0.00013863 -0.00110870 -0.01147300 -0.01147300 -0.01147300 -0.01986300 -0.01986300 -0.01986300 0.00541390 -0.01146600 0.00402430 -0.00207840 -0.73530000 -0.00055444 -0.00055444 -0.00360110 -0.00360110 -0.00691950 -0.00691950 -0.00691950 0.00110930 0.00110930 0.00084678 0.00485790 0.00485790 0.00485790 -0.00325840 0.00416320 0.00777830 0.00638710 0.00249690 0.00249690 0.00249690 -0.00387790 -0.00387790 -0.00387790 -0.03272300 0.00013863 -0.00110870 -0.73512000 -0.01147300 -0.01147300 0.00736090 -0.01986300 -0.01986300 0.00541390 0.00360760 -0.00249380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5561577 12.8131530 6.7222133 9.5827833 3.3851825 10.4526837 0.9446336 -0.8627588 8.3491392 7.3246027 -1.8624965 8.2223250 1.9445961 9.6671696 9.5889773 2.6608146 9.1287728 9.5471724 10.4779357 9.1001472 9.9628260 9.0463942 10.0892643 3.4947996 10.8958907 9.6375950 2.7811079 -1.8624965 10.0568593 4.1372494 12.3349285 11.5008383 7.5166298 10.6074015 7.7278381 8.7052073 4.5295711 -1.8624965 2.6608146 3.2247195 9.1173906 8.9169704 10.5236525 2.5295711 7.3861513 4.1816433 10.5101161 6.7033056 9.4603058 NA 12.2465104 3.4226501 5.7883020 9.6869347 5.0501403 4.4410319 9.3606496 7.3851782 6.3612525 -1.8624965 13.3873274 0.7222037 9.9823491 NA 7.9120378 5.6291030 7.9120378 8.2587846 12.518895 3.596685 8.345486 12.637346 10.492877 10.437890 13.478596 14.027183 9.358234 11.401400 13.215444 9.366671 9.480437 9.297122 2.995231 8.203340 12.554378 11.1037565 8.6220738 9.1999719 8.9004635 9.1273550 10.9402581 6.1925335 7.2844558 7.8736533 6.8237519 5.8921384 8.1130988 6.6521624 12.4575580 10.2847740 7.1344304 8.0501403 14.2902092 6.2194009 12.2054432 10.9762579 10.4327330 9.7203339 12.1759986 9.0724162 10.8285584 9.7175097 -0.2777089 9.2225377 6.1202441 11.0874424 8.3816148 10.6876540 9.9546344 8.0665984 13.7488811 9.7860580 10.2411945 12.8211778 10.5564213 10.9282104 0.7222037 TCGA-A8-A09W 70 0 NA 30 breast stage iiib t2 n3 m0 female 2007 NA NA infiltrating lobular carcinoma NA NA NA 6 3 1 NA 3 5 1 2 NA NA NA NA 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 5.201959e-07 10.633383 9.804154 10.883153 9.707612 9.772685 9.851416 8.017625 8.281437 8.312216 7.229978 10.037333 10.416376 1.331132 12.839332 2.916094 9.408830 4.446600 8.092676 9.686475 12.814184 2.653060 12.765405 5.591652 9.813596 11.026063 6.729156 2.553508 11.472593 10.789531 2.205580 7.477481 6.790556 1.746141 5.501051 9.496031 10.364089 9.849450 9.839580 9.816954 10.570325 NA 10.276081 13.659893 8.652436 9.548678 11.484888 11.187031 4.031563 3.390021 8.948286 10.784738 1.331132 10.984865 6.534065 5.974981 4.676899 8.927314 11.859579 8.955615 11.286048 12.878822 7.371871 10.220882 9.536510 11.280708 10.327833 4.103716 11.212493 7.833625 6.520949 9.614985 10.162959 NA 6.094891 11.757214 10.184434 10.542202 10.913894 2.916094 9.909812 11.721114 11.158732 9.275593 9.045370 0.4498600 0.6562700 0.6899900 0.1451800 -0.0073339 0.0000000 0.0034687 -0.0310860 -0.7429900 -0.0103700 -0.0103700 1.4328000 0.0025021 0.0645110 -0.0308380 0.1670000 0.1670000 0.0052749 0.0076392 0.0026357 0.6606900 -0.7291400 -0.0681270 -0.0681270 1.8024000 -0.0033243 -0.0033243 -0.0135530 0.0144700 -0.7385400 -0.0806740 -0.0247980 0.0087528 0.0151680 -0.0436020 0.0034687 0.0034687 -0.0310860 -0.7429900 -0.0242510 0.7368200 -0.7282600 0.7077600 -0.7366100 -0.7366100 0.0043021 0.7239500 0.0645110 1.3533000 -0.0308380 0.6257000 -0.7508000 -0.0305400 -0.7290600 0.0076392 0.0076392 -0.7295800 -0.0549600 0.0153080 -0.7271200 -0.0681270 -0.0681270 -0.0417020 -0.0404800 -0.0033243 -0.7465500 0.0265140 -0.7337200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.716 -0.737 0.000 -0.311 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.716 -0.737 0.000 -0.311 0.265 8.0129485 12.0606036 3.6041425 8.9905258 4.0680860 9.4604076 -1.2539453 NA 7.8625059 5.9845666 NA 7.5010498 0.3311319 10.3627109 8.8494498 2.5535080 8.0499427 9.4595484 9.0129485 11.6120885 9.4011560 6.9988273 10.7823356 1.9160944 8.7119464 8.6103479 6.5077138 NA 10.9091826 -1.2539453 12.2306073 12.0872638 8.0567748 8.3141182 9.2814375 9.7580881 8.5043852 1.0681205 -1.2539453 2.9940909 8.8149403 9.4706758 11.3000312 4.5275208 4.7461623 6.8651035 10.3534922 6.9009803 10.7549407 NA 10.2096863 -0.2537732 3.7905531 8.9000432 6.9032564 3.4466003 8.4740823 9.7775185 6.2380149 NA 13.7943934 NA 10.0035498 NA 7.4638382 5.4604084 7.8309702 9.7713016 9.675420 7.129866 8.927314 12.839332 10.060745 11.360182 12.814184 9.404374 8.965331 10.892731 12.719770 9.506050 8.948286 7.974981 NA 8.800088 11.085177 11.233500 5.906034 8.682800 8.902245 9.111391 10.380133 6.012949 6.880589 10.037333 6.670975 2.653060 3.875446 6.942395 11.807533 10.625745 8.806858 9.093783 12.409831 4.790558 9.601046 9.849450 10.545444 10.357187 11.204312 9.161904 11.304344 8.808208 NA 8.700983 3.916085 10.984865 7.415047 10.228133 8.927314 7.706164 13.711631 9.924204 10.881871 12.169934 9.676160 9.812251 2.994091 TCGA-A8-A09X 62 1 426 NA breast stage iiic t2 n3a m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 6 3 2 NA 1 5 2 6 4 1 NA NA 0 0 0 7 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 9.822926 9.987272 11.364607 8.638921 8.276351 9.502316 9.033591 9.296435 11.584538 8.176677 10.197171 10.488665 2.186976 12.677264 6.825561 10.125738 7.475722 8.333008 8.538100 12.149462 1.534908 11.560221 5.441776 9.487517 11.162418 7.124134 -1.272297 12.617793 11.478236 2.727528 8.304958 6.846469 NA 5.946698 9.889920 11.071270 9.168398 10.256471 9.863238 11.759575 4.681725 7.585510 15.181394 8.075084 9.243229 11.704809 10.367774 4.049457 1.534908 8.735957 11.760263 NA 10.180285 5.399954 7.389307 6.145382 10.092758 12.071686 10.615511 10.647882 12.618553 6.186960 10.369129 9.397061 10.829833 10.742944 5.012931 11.099850 6.867080 NA 10.537297 9.661957 1.727528 6.489080 10.965635 9.874097 9.930265 9.638921 3.814991 10.066265 12.088102 11.101481 9.818303 9.087279 -0.2791800 0.0086135 -0.1069900 0.2174500 -0.0320410 -0.1146200 0.2285400 -0.0176660 -0.0346810 0.2111500 0.2111500 0.2111500 0.2179100 0.4651900 -0.0241140 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.1652000 0.2189600 -0.0085766 0.2220600 -0.2931900 0.2384500 -0.0468540 -0.0468540 -0.0468540 -0.0077482 0.0075000 -0.2791800 -0.0184900 -0.3148200 -0.1131200 -0.1154300 0.3361000 0.2520600 -0.0176660 -0.0346810 0.4875100 0.2172900 0.2162200 0.2111500 0.2180600 0.2180600 0.2180600 0.2180600 -0.0302670 -0.0165220 -0.0241140 -0.0241140 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.4080400 -0.1652000 0.2189600 0.0000000 -0.3048700 -0.2946100 -0.2931900 -0.3347300 -0.0468540 -0.0468540 -0.0201360 0.2117700 0.1190200 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.077 0.218 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 0.000 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.077 0.218 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 0.000 9.4948858 12.5647625 2.8974534 8.8911786 4.0136677 10.6897019 3.8149913 NA 9.1930953 7.1241337 NA 8.0718914 2.1869759 10.3082585 9.0335907 2.7275284 8.4656211 8.8399684 9.6215887 11.5934554 9.9528809 7.2666872 11.1363892 3.3903100 7.2471652 9.6344194 4.6344190 NA 9.9748630 2.3124909 13.9178937 12.2200080 7.7882250 9.4357505 8.9860949 9.6246180 4.9754559 3.4279681 1.0494914 4.7498989 8.2878615 9.8924358 9.5667326 3.3713916 8.1725435 9.4061289 9.8016704 6.9943150 9.7841666 NA 9.7140820 4.8149913 4.0494565 9.8575781 5.5725168 7.3459144 9.1787400 9.6449009 8.8399684 1.0494914 15.0054155 0.7275284 10.6265080 NA 7.3641530 5.7936176 7.1411569 9.5113457 12.129639 7.071825 8.836053 12.677264 10.333934 11.417090 12.149462 8.647882 9.137980 10.875052 12.777462 11.017548 8.735957 6.211345 3.814991 7.790924 10.195644 11.293821 7.566733 8.672973 9.503962 8.329299 10.796562 7.713371 8.166321 10.197171 7.304957 1.312491 2.049457 8.129454 11.676079 11.113930 8.816317 8.443491 10.353694 8.371385 10.239469 9.168398 10.764733 10.118235 11.650113 10.097126 10.895574 8.830817 NA 10.318336 7.970703 10.180285 7.941848 10.766791 10.092758 7.239282 14.292631 10.972784 10.905882 12.220759 10.861313 9.385740 3.856816 TCGA-A8-A09Z 83 0 NA 0 breast stage iib t3 n0 m0 female 2008 NA NA infiltrating lobular carcinoma NA NA NA 3 1 2 NA 1 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 1 0 0 0 0 0 4 0 0 0 0 6 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 4 0 1 0 0 0 0 0 0 0 1 0 0 0 0 6 0 4 0 0 6 1 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 1 0 0 0 1 6 0 0 0 0 7 0 0 0 0 0 0 1 4 0 0 0 0 6 0 0 0 6 4 0 0 6 0 4 1 0 0 4 0 5 0 0 0 4 0 0 0 0 0 2.718891e-05 9.328847e-06 9.4053268 10.2821409 12.1610015 10.0966258 8.6181417 8.9471284 11.5722113 9.2329320 10.6000110 11.9829305 10.1784347 9.8842305 -1.4864082 13.4176131 2.9058515 9.7126018 7.5769378 7.5469662 12.5767696 11.9560978 0.5135918 14.3946809 -1.4864082 9.8399388 9.7919924 7.1681787 0.5135918 10.8558427 9.6010060 1.5135413 9.0380847 7.5135429 NA 4.6220694 9.6434700 9.4807694 9.0757856 11.6145338 10.5181146 10.8853197 -0.4864082 10.5317433 16.0711189 8.0118338 10.8210285 11.1298622 10.8531147 4.3715240 6.4083603 9.4648277 9.0233180 NA 9.7638414 5.0985038 7.1859686 5.0371054 10.3047059 10.9031744 9.1171693 10.7214725 12.4850866 6.0833985 9.7211676 8.4244703 11.1576246 11.6056395 5.3337207 11.1947815 12.1844206 -0.4864082 10.7644336 8.3652923 1.4862510 5.3337207 11.0331793 10.1659399 10.6903395 9.9356078 -1.4864082 1.0984869 12.5145113 11.2435885 9.0410201 8.3621661 0.01228800 0.77220000 0.79537000 0.02361800 -0.00230410 0.00741230 -0.00202720 -0.00811140 -0.00811140 0.00000000 0.00000000 0.00000000 0.02530200 0.02239200 0.00827780 -0.00030116 -0.00030116 -0.01293800 -0.01293800 -0.00728280 0.00894340 0.03081400 0.00922200 0.00922200 0.00922200 -0.00091897 -0.00091897 -0.03390000 0.03614000 0.01228800 0.01228800 -0.01087100 -0.84472000 0.00741230 -0.02173300 -0.00202720 0.76991000 -0.00811140 -0.00811140 -0.00811140 0.00018986 0.00018986 0.00000000 0.01429700 0.01429700 0.01429700 0.02081500 0.02239200 0.02239200 0.01284600 -0.00030116 -0.00030116 -0.00030116 -0.01293800 -0.01293800 -0.82738000 -0.00728280 0.00894340 0.06785800 -0.82372000 0.00922200 0.00922200 -0.83370000 -0.00091897 -0.03390000 0.03614000 0.00924630 0.05884700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.97910961 11.04735946 NA 8.01538048 4.63455842 11.96165935 -1.48640819 NA 8.22434952 6.28172792 NA 6.02133758 -0.48640819 9.95804036 9.11624180 1.32088898 7.00939756 7.37772937 8.48939120 11.00088063 10.29526752 7.95025435 10.09474357 1.83547948 6.97706694 10.65085447 -1.48640819 NA 10.64732746 2.60100709 13.01637484 13.15582042 6.06043655 10.19609872 8.04102006 9.70583591 5.42043524 2.32088898 0.83543905 6.37152401 8.63118615 10.84137635 10.45385665 1.32088898 6.85174405 7.58500533 10.65692623 5.56882561 9.47932738 NA 10.06525132 3.42042850 2.97296830 9.60988273 6.15675053 NA 9.15288385 8.27009953 4.29490007 -1.48640819 13.82717012 0.09855431 10.31403858 NA 4.72299601 3.68347189 7.55520187 9.97808878 8.1118561 3.0985038 8.1592013 13.4176131 10.7414597 10.4215603 11.9560978 12.7435635 9.4597183 10.8138155 13.3765678 11.1567228 9.4648277 9.1555947 -0.4864082 7.6530944 11.0695701 10.45165241 7.93139527 10.60332452 7.75194769 7.74716246 9.45357026 6.94399515 8.53313386 10.17843467 7.43240660 NA 0.51359181 8.28447110 8.72177730 9.77681216 6.76620820 8.42043356 11.89440990 4.90586111 9.74571818 9.07578557 10.29449290 9.91655502 10.66582790 10.69841836 10.92187277 9.75373806 -1.48640819 9.58868784 3.37153098 9.76384144 4.57963273 11.30897394 10.30470588 8.82537097 13.44898437 10.47173323 11.27613272 13.21165081 9.89021107 9.68158824 0.09855431 TCGA-A8-A0A1 84 0 NA 365 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 5 2 3 NA NA NA 1 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 10.6821802 10.4466515 11.9389197 10.1656537 8.0691774 9.7234587 10.5836832 9.3500782 9.7985726 8.4487259 10.5622884 10.3781033 1.5907218 12.5676669 3.7062211 9.8544053 5.5603726 8.2201016 10.0071906 13.0233737 1.0057593 13.9926910 5.7871425 9.7193922 10.2842319 4.6782072 -0.9942407 11.1456119 9.2772453 2.0057952 7.8512724 8.2608109 NA 4.2911836 9.9894886 10.3004031 10.4921146 11.3660808 10.3004031 10.9175488 1.3276874 11.0674910 14.8054434 8.5698176 9.6387776 11.7592081 11.4037243 4.2537095 3.8637601 9.3840772 11.9672321 NA 11.1825788 5.7200267 7.1656537 5.6782072 10.3422889 11.8575314 10.6360495 12.4393678 12.7969452 7.8637632 10.8327280 10.3864220 11.1694321 11.5036342 5.4320474 11.9391042 9.8267590 NA 10.3338963 8.9141749 2.3000358 5.7871425 10.5366764 10.1968416 9.7260267 9.9636099 1.5907218 9.6360494 13.1491656 10.9257629 10.0121084 9.4445741 -0.00636680 0.84179000 0.83711000 -0.00539510 -0.01243800 0.00180300 0.24156000 0.00527490 -0.00249380 -0.00498440 -0.00498440 -0.00498440 0.00152550 0.00152550 0.21622000 0.20916000 0.20916000 0.16205000 0.17091000 -0.00443120 0.00000000 0.00723540 -0.00830050 -0.00830050 -0.00830050 -0.01656700 -0.01656700 -0.02675500 0.25683000 0.00444110 -0.64499000 -0.00222300 0.00194180 0.00180300 0.00039394 0.23473000 0.23295000 0.00527490 -0.00249380 -0.00249380 0.24047000 -0.64523000 -0.00498440 -0.00055444 -0.00055444 -0.00055444 -0.00790610 0.00152550 0.00819590 0.21622000 0.20916000 -0.63840000 -0.65573000 0.16205000 0.17091000 0.19131000 -0.00443120 0.00000000 0.00569190 -0.64443000 -0.00830050 -0.00830050 -0.00069303 -0.01656700 -0.02675500 0.24018000 -0.00698830 -0.02384000 0.000 0.000 -0.422 -0.638 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.422 -0.638 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 9.5459105 13.1498829 3.5907457 10.1162657 8.7068983 10.0759033 NA 0.5907218 7.5214819 7.9006000 NA 7.0673967 4.3633323 10.2719833 9.1517145 -0.9942407 9.6223312 8.7044871 10.2519291 9.6622073 9.7323581 8.2394019 10.5584514 3.2911910 8.3322120 9.9365197 2.5907457 0.5907218 10.4294236 2.1757162 11.7743802 11.7268815 7.8853657 10.4018519 8.9201676 8.8227658 5.0057817 2.7062211 1.8131552 6.2441868 8.5603711 9.9628844 9.3231949 4.8386745 6.3366994 5.2911836 10.3095631 6.5135776 9.4299486 NA 10.7997920 3.5293462 4.0501795 8.9450824 5.5251042 NA 8.8001981 10.1894178 4.5907457 NA 13.6850425 -0.9942407 10.0336884 NA 7.6922828 2.1757162 7.6639935 8.5352128 13.449827 4.678207 8.050176 12.567667 10.523944 10.742184 13.023374 12.453382 9.365532 11.036105 12.999782 9.107758 9.384077 9.166914 1.590722 7.477458 11.178210 10.987350 7.816354 9.110381 8.535213 9.186935 10.170501 7.809913 8.263170 10.562288 6.234601 2.005795 5.560373 7.315077 11.715082 10.629207 7.263171 8.142773 13.778045 6.253709 12.125678 10.492115 10.589335 9.953419 11.618651 9.742184 10.862208 8.735403 NA 9.278179 3.005777 11.182579 7.135065 10.413581 10.342289 7.150441 13.089760 10.133777 10.149803 12.828751 10.101839 10.037139 NA TCGA-A8-A0A2 66 0 NA 579 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 5 2 3 NA NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 3.467973e-07 10.7032604 10.3010982 12.2273107 9.5275808 8.5206446 8.5241170 10.6280772 9.3776264 10.0492863 12.9375821 10.6845056 10.5888252 1.2387257 12.8790161 4.3472404 8.7904231 6.9632290 8.8133082 9.1575778 13.3029523 1.2387257 14.0889748 4.8680694 9.2941532 11.3713751 6.7504672 NA 11.9003459 8.7642357 4.0966920 9.0716047 6.6395939 NA 5.1090805 10.1113896 10.8476626 9.6240378 12.2290847 10.6307637 11.3153633 2.3261634 11.7933036 15.2022656 7.6972442 9.9759620 10.0460696 11.3686417 4.7465116 2.0460719 9.0143249 11.4064465 -0.1762506 9.5066718 9.3871913 6.3101765 3.9391513 10.2523863 12.2773766 10.9404543 12.4715853 13.1450886 7.3654196 11.0298776 10.9111865 11.5755002 11.5910341 5.3261778 12.9366597 12.8902149 NA 10.2929799 9.3808219 4.7715000 5.7144489 9.7275591 9.8194443 10.4618114 10.3165318 2.6310344 9.3446233 13.0465727 11.8296526 10.1808627 9.7205141 -0.3297600 0.4385100 0.9994500 0.0022932 0.0012481 -0.0163810 0.0833420 0.0181030 -0.0090478 0.4513900 0.4513900 0.4081300 0.0259520 0.0216340 -0.3547600 -0.3547600 -0.3547600 0.0000000 0.0000000 -0.6754500 0.3320500 0.0458490 -0.7472500 -0.7511500 0.0445740 0.0555150 0.0555150 0.0555150 0.0907200 -0.2955600 -0.3297600 -0.2679300 0.0022932 0.0143300 -0.0127130 0.0833420 0.0833420 0.0181030 -0.0090478 -0.0090478 0.3757800 -0.7680000 0.4513900 -0.3211200 -0.3211200 -0.3211200 -0.2721200 -1.2464000 0.0894160 -0.3547600 -0.3547600 -0.3547600 -0.3547600 0.0000000 0.0000000 0.0000000 -0.6733400 0.2801000 0.0458490 -0.7491600 -0.7483500 0.0445740 -0.2823900 0.0555150 0.0555150 -0.2941400 -0.3947500 -1.0972000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 0.000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 0.000 8.9084857 12.7328828 8.4420627 10.0684374 2.5990797 11.2518629 1.8236678 -1.7612131 8.9977706 7.8293016 NA 7.6438562 1.0460719 9.6597277 9.7831962 1.8236678 7.9700340 8.8843732 12.9044947 9.9159939 9.9319272 8.7942625 9.9615222 4.4285377 9.3705717 9.8861732 1.5606660 NA 10.6942989 2.6981518 12.1643619 11.6295554 7.4359311 10.3644511 8.0282481 9.3041309 4.9111403 -1.7612131 2.3261634 0.5606171 8.7022392 9.1943646 10.1819621 2.6310344 6.3628363 5.7700969 10.8159075 5.3884617 9.7831962 -0.7612131 11.1086941 2.8236678 5.2721389 9.7742720 5.9686760 6.5379235 9.2450409 8.1635274 8.3705719 -0.7612131 13.7962383 0.5606171 10.1263161 NA 6.4866420 5.3576540 8.1885414 7.7365663 12.943472 4.121355 8.796179 12.879016 9.762767 10.828834 13.302952 12.788499 8.858559 10.921490 13.377906 10.869209 9.014325 8.660780 NA 8.234482 11.337734 10.982077 8.367998 8.870792 7.726555 8.167973 10.145440 7.285839 5.006899 10.684506 6.823677 4.853427 3.853427 6.440495 10.571311 9.851122 7.762276 8.119829 12.748984 7.956391 13.434430 9.624038 10.673604 9.873072 12.445958 8.773990 10.573267 8.912907 8.612667 9.531859 7.664980 9.506672 7.362836 10.407732 10.252386 7.556195 13.982547 9.745518 10.094751 12.678740 10.684247 10.362513 3.524114 TCGA-A8-A0A4 73 0 NA 396 breast stage iia t2 n0 m0 female 2009 NA no infiltrating lobular carcinoma NA NA NA 2 2 1 NA 2 5 3 3 3 1 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 10.2987498 10.4527455 12.0793661 9.8524686 8.3273775 9.0945214 10.9269276 9.0430746 10.0026367 11.5130723 11.4012072 10.8069278 2.2593328 13.1991118 3.1922257 10.1127835 7.0572889 9.2209135 10.6394981 12.6000927 -1.2002495 13.4916986 7.5107072 9.6130564 11.1184434 7.8847090 -0.2000838 11.4586097 9.5664295 2.7067957 8.2997465 7.6640867 -0.2000838 5.7999007 9.9547188 9.9432839 9.0454533 11.5865786 9.6764176 11.1833349 10.4269785 11.3434158 14.9299482 9.0761414 10.6702537 11.2992482 11.3501664 5.5278210 4.1218277 9.3116532 13.2328339 NA 11.1237998 5.6453904 4.1574561 2.7998955 10.3062082 12.1547009 10.6640868 11.7293439 12.9661422 7.0478285 10.8477062 10.6866755 11.5072597 11.9499652 5.2261655 11.7322999 12.5630092 -0.2000838 10.4942585 9.1684071 4.0501011 4.5812608 10.1347325 9.9578791 10.6875020 9.9717029 8.7885852 9.4536414 12.9876393 11.7974329 10.2756340 10.1981098 -0.6354700 0.3259100 0.0195730 0.0043021 -0.0023553 0.0033299 0.6476300 0.0022193 -0.6363200 -0.0041546 -0.0041546 -0.0041546 0.0090312 0.0105640 0.0000000 1.2427000 0.6182400 -0.0046748 0.0105640 -0.6389700 0.0000000 0.0101460 -0.0060904 -0.0060904 -0.0060904 -0.0162920 -0.0162920 -0.0162920 0.0102850 0.0143300 -0.6354700 -0.0069195 -0.6481200 0.0033299 0.0012481 0.6476300 0.6238000 0.0022193 -0.6321600 -0.6695700 0.0024969 -0.6438700 -0.0041546 0.0045800 0.0045800 0.0045800 0.0043021 0.0105640 0.0105640 0.0000000 -0.0309500 -0.6456500 -0.6456500 -0.0046748 0.0276380 0.0033299 0.0038854 0.0000000 0.0101460 -0.6413300 -0.6397200 -0.0060904 -0.0949880 -0.0162920 -0.0162920 0.0102850 -0.6425500 -0.6502400 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9860149 11.3224821 3.6578801 9.9785655 5.1218277 11.8758811 2.9698228 1.9698228 8.7526419 9.0466411 -0.2000838 9.1906714 4.6825452 9.7180184 9.8160124 2.2593328 9.5192895 9.3697561 10.2766468 10.4621239 10.0337898 8.3175700 12.2793020 2.3848511 10.5771559 9.7112925 7.7828941 NA 10.6351615 3.6072593 12.3793344 13.2978771 7.9798099 9.5886189 8.7942540 9.5244144 5.5812608 -1.2002495 -1.2002495 4.5547853 8.7857424 10.9372120 9.4201204 5.8333228 8.6781814 6.2511112 10.5354567 6.1486291 9.6547690 NA 12.1009680 4.5812608 7.0760246 9.6496887 6.7255435 1.9698228 9.3914230 9.3429325 11.2156424 0.7999162 13.8912120 NA 10.5033717 NA 6.8713632 6.3697561 7.3923578 8.0690270 13.716725 5.066688 8.414610 13.199112 9.821575 10.347759 12.600093 12.406537 9.595664 11.245174 12.550817 9.684834 9.311653 8.459896 1.384879 7.727679 10.583717 11.434712 7.192218 8.087613 8.963550 9.250081 10.982528 6.066688 8.586170 11.401207 4.844295 3.969823 6.827806 7.438699 11.844465 11.141419 7.255228 9.198644 13.108097 6.076025 11.533007 9.045453 10.672960 10.089919 9.896616 10.188994 11.050495 8.994658 3.192226 8.796290 4.887364 11.123800 5.226166 10.289749 10.306208 7.135291 13.585966 10.059644 9.759902 12.829274 11.071364 10.484211 1.384879 TCGA-A8-A0A6 64 0 NA 640 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating lobular carcinoma NA NA NA 2 2 1 6 NA NA 3 4 2 4 NA NA 0 5 0 4 0 0 5 0 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 1 0 5 0 4 0 0 5 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 4 4 0 0 0 0 0 1 0 0 0 0 5 0 4 0 0 0 0 5 0 0 4 0 4 0 0 5 0 0 0 1 0 0 4 0 4 0 0 0 1 4 0 0 0 0 0 4 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 7.053857e-05 3.089964e-05 10.61007788 9.86012308 11.36471074 9.33382309 8.52200120 9.37138919 9.83681301 10.22195898 9.73961338 12.04110818 11.61326615 10.50678430 NA 13.46402327 4.84434548 8.97667982 5.49885080 8.90163654 8.20580302 13.06808029 2.25939302 13.25577922 6.49033908 9.03782641 10.42373247 4.97210443 0.08949815 12.38723527 9.42037608 3.94744174 7.40687166 7.74767070 0.08949815 5.53240424 10.04656118 11.00794979 9.61791334 11.72812136 10.51467510 11.35448814 8.61693621 10.03490307 14.28847967 9.25686489 9.64212825 11.56088038 11.37976612 5.39324114 5.48177683 9.37601705 12.28621498 0.08949815 11.37890178 5.74766936 7.88387493 5.33738641 10.93494922 11.94530099 10.56062631 11.78272835 12.90253892 8.13658310 11.09121923 10.92125333 11.33501193 10.88549879 5.23920708 12.02830365 10.83807140 0.08949815 10.03855635 9.19798355 3.17777431 6.25938360 10.01723713 10.32128043 10.05452197 10.26687870 3.89681433 10.06100281 12.57679680 12.20092094 9.79509157 8.89035914 0.457860 1.122700 1.126200 0.038630 0.031001 0.074840 0.037862 -0.203860 -0.200960 0.050941 0.050941 0.034612 -0.109870 -0.103030 0.695770 3.656900 3.656900 0.039478 0.035586 -0.014916 -0.193620 0.061365 0.053948 0.492510 0.047836 0.429230 0.000000 0.446130 0.060365 -0.185840 -0.446740 -0.191990 0.038630 0.074840 -0.011874 0.037862 0.037862 -0.203860 -0.200960 -0.199870 0.032563 0.032563 0.050941 -0.190610 -0.190610 -0.190610 -0.190610 -0.103030 -0.086253 0.683110 -0.467380 -0.444050 -0.451660 0.039478 0.035586 0.060936 -0.014916 -0.446090 0.061365 -0.444420 -0.426580 0.047836 -0.190640 -0.011473 0.000000 0.060365 0.050961 -0.432030 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 9.62764806 12.26391680 6.52408719 9.48284969 5.27928556 10.78468751 3.08946425 1.08943035 8.38866743 8.71516820 NA 8.17426758 2.54888046 10.56569913 9.42819558 0.67446065 9.10626744 10.34861397 11.08910695 9.84267593 10.22936861 7.44701130 10.70646744 3.41138557 9.18089451 9.30134757 3.73331095 NA 10.52773121 4.44701047 12.58493951 12.15571660 8.33501199 10.41082358 8.60515909 9.07387752 5.33738641 2.89681433 -0.91050185 4.54889279 8.46883743 10.98541312 11.05848589 4.84434548 9.01825889 6.68937185 10.67207161 6.62861760 9.59030110 -0.91050185 10.43984594 2.67441545 4.87081842 9.84422149 6.60822968 7.50731181 9.65931487 8.75657067 9.24933061 NA 13.78637240 0.08949815 9.93259509 -0.91050185 7.54478674 5.49885080 8.54272971 8.45796564 14.4434702 4.7041693 8.9598240 13.4640233 10.3206804 11.4538675 13.0680803 11.6657073 11.7635124 10.7911989 14.0218124 8.6517015 9.3760170 10.3823560 -0.9105018 7.6324907 11.4796282 10.6076206 5.7759592 8.6517015 8.4557813 7.9096381 10.0345665 7.9286629 6.7188164 11.6132662 7.2792837 4.3748586 9.3909555 5.9340706 11.1386271 10.1973301 7.1769221 9.5550256 11.3585859 9.0113002 11.4057237 9.6179133 10.1802333 8.7601155 11.2315663 9.7050889 10.2174536 8.9427687 -0.9105018 8.9737060 8.4203759 11.3789018 5.5972541 10.4979428 10.9349492 7.3794780 13.7052612 10.1676099 10.6036801 12.8031679 10.6223021 9.5427299 3.6130247 TCGA-A8-A0A7 57 0 NA 30 breast stage iib t2 n1a m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 7 3 2 NA 1 6 2 6 1 2 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.254182e-06 6.242351e-07 10.4235156 9.6742624 11.6706180 9.7159438 8.5863662 9.4537174 9.2941552 10.1649287 10.5300183 12.4812210 10.5215658 10.4907985 NA 15.7651060 3.7804886 10.0910319 6.2732529 8.9446728 8.1649285 11.3611464 0.2362171 10.5959131 1.8211387 9.5068483 10.3160927 7.1629542 1.4585395 10.6345510 10.4915856 3.1747579 9.3209720 7.4456166 NA 8.0021405 9.9331310 10.1520429 9.7913918 10.0931077 9.5922487 11.5995683 1.9731337 7.8679471 14.8321397 6.8958976 9.5708094 11.0774658 10.8104417 4.4585592 3.9366003 9.1903598 11.0289538 NA 11.0188888 6.9085884 8.5951810 6.3859107 10.9050486 11.5564000 10.0186158 11.5446922 12.5527279 7.2134435 10.6266908 10.3346694 11.1067851 11.1274409 4.6053995 11.7261787 8.6610295 3.8606550 10.5017786 9.2594559 2.8998910 7.0349057 10.3930893 9.8848207 9.8890085 10.9885442 4.9179854 7.4259879 12.4533135 11.7428017 9.8248783 9.1678860 0.070817 0.070817 0.070817 -0.038170 -0.038170 0.051956 -0.052126 0.055373 -0.133850 -0.132380 -0.132380 0.729050 -0.127270 -0.066386 0.111840 0.111840 0.111840 -0.061286 2.295100 0.044715 -0.066190 -0.041702 -0.127970 3.296400 0.365590 -0.011749 -0.011749 0.335450 0.325110 0.070817 0.070817 -0.023292 -0.038170 0.051956 0.051956 -0.052126 -0.052126 0.055373 0.055373 -0.141610 0.096961 0.088013 -0.132380 -0.126420 -0.126420 -0.126420 -0.126420 -0.066386 -0.114710 0.111840 0.111840 0.111840 0.111840 -0.061286 -0.118870 -0.123400 0.046842 -0.066190 -0.238170 -0.107750 -0.127970 -0.149780 -0.094134 -0.011749 0.335450 0.312660 -0.023977 -0.133550 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.322 0.322 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 0.000 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.322 0.322 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 0.000 10.6976430 12.8231597 3.5091764 9.0669427 7.0393040 10.5737855 4.0774652 4.0087558 8.7213221 6.6455547 NA 8.7399892 3.3516425 11.2441252 8.9062295 2.5580962 10.0894731 9.7804840 10.4206257 10.9118266 10.3956523 7.9595401 9.7446186 4.1106305 5.9910501 9.9714375 2.2361558 NA 12.5422252 1.8211387 13.0033824 12.3689846 7.9203278 10.4605673 9.8649129 10.3684491 5.4966924 2.3516283 0.6512239 2.6512010 8.7078388 10.2709626 10.4892231 6.0774652 6.3859107 7.7675449 10.5138384 5.7386652 9.5467764 NA 11.0303086 4.3236295 3.4060876 9.4124697 4.7693116 10.1380361 9.9538400 10.5138384 11.7590720 1.9731337 13.6752152 1.9731337 10.6890911 NA 8.5520677 4.0435195 8.7714390 9.0920702 12.228630 6.309413 8.417730 15.765106 10.113233 10.837625 11.361146 9.264070 9.260380 10.759726 13.398555 8.145056 9.190360 9.177700 1.236156 7.943523 11.834526 10.5349898 4.1430505 8.9446728 7.7649432 7.7199795 9.6543464 9.0605919 7.6053973 10.5215658 7.3129791 0.9731337 4.1106305 7.4770499 11.2314596 11.1000917 8.3022528 9.8404078 10.6427229 10.6270490 11.1960061 9.7913918 10.5041206 9.6928603 10.4177300 10.1435550 10.4629771 9.5414653 NA 9.5295202 10.3555370 11.0188888 7.5399443 10.3363878 10.9050486 7.6583965 13.7804841 10.6013924 11.0010352 12.1927817 10.1659151 9.1619653 5.3654476 TCGA-A8-A0A9 80 0 NA 822 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 5 1 1 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 2.080784e-07 10.6828363 10.4829751 12.0796027 9.6699250 8.7520989 8.4464945 10.1039024 9.5527175 9.9983748 9.0221403 11.7802452 10.6902722 1.2285417 13.3097291 3.9834223 10.7045236 6.3212950 8.7153721 9.7623533 13.4703339 -0.1865574 14.0662634 3.8432503 9.9517115 11.2444746 4.1111816 -0.7715199 9.6246065 11.7332318 1.8134836 7.4549490 7.1943215 2.0359054 4.0614306 9.2299452 10.6450706 9.7078119 11.5443941 10.0590521 11.2409869 1.0359054 11.4448281 15.2640986 8.6048794 9.7383120 11.7814461 11.4618570 4.0865205 4.1592740 9.3591076 10.9117509 NA 10.9022877 4.8723954 6.0740280 5.3265697 10.1986428 12.0314571 10.8676515 12.3304306 12.9067519 7.9834246 11.0084615 10.8835801 11.2521181 11.5163936 4.8867501 12.2658265 11.4792795 0.2284801 10.5185558 9.3133454 3.6433483 5.7831266 11.0657707 10.2616158 10.3636049 9.9556065 2.9289766 7.6100799 12.7236425 11.1207002 9.8528754 9.4788353 -0.17942000 1.28910000 1.25710000 0.00000000 0.00000000 0.51141000 0.78331000 -0.10145000 -0.10145000 0.64249000 0.64249000 0.64249000 -0.05967300 -0.05967300 0.00097064 3.65690000 3.65690000 0.25636000 2.28150000 -0.22256000 0.16595000 -0.04088800 0.03354900 0.03354900 0.03354900 0.41329000 0.41329000 0.41329000 0.78234000 -0.17942000 -0.17942000 -0.17752000 0.00000000 0.51141000 0.51141000 0.78331000 0.78331000 -0.10145000 -0.10145000 -0.10145000 0.65259000 -0.52440000 0.64249000 -0.34561000 -0.31506000 -0.31506000 -0.31506000 -0.05967300 -0.05967300 0.00097064 0.00097064 -0.85773000 -0.85773000 0.25636000 -0.56783000 -0.58350000 -0.20423000 0.16595000 -0.04088800 -0.55066000 0.03354900 0.03354900 0.27868000 0.41329000 0.41329000 0.78234000 -0.24849000 -0.31085000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.244 -0.896 0.642 0.642 -0.315 -0.315 0.000 0.000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.244 -0.896 0.642 0.642 -0.315 -0.315 0.000 0.000 8.0229525 13.5800974 6.3629625 10.3344455 3.2729339 10.9543292 -1.7715199 NA 7.6143992 7.2592037 NA 6.5530778 4.3370617 10.2821235 9.9367586 2.2285417 7.8002897 9.5948592 11.1524215 10.2787257 9.8001758 9.0318608 9.7850431 3.1354199 9.3186495 9.8321633 2.3160009 NA 10.9135047 1.6879565 12.0990943 12.1011156 7.3291990 9.9470698 9.0653763 10.0025003 4.8867501 1.5504574 2.2285417 6.9632464 8.7898248 10.0759858 8.4282094 2.6879789 6.0502470 6.2000806 10.2327574 7.0771597 9.6889928 NA 11.3595900 3.7203879 4.0358878 8.6122736 5.7294984 NA 9.7057893 8.8822777 4.0358878 -0.7715199 13.8889507 0.2284801 10.3725578 NA 8.1096510 2.9289766 7.5162492 8.4232937 15.900810 4.970002 8.299999 13.309729 10.267113 10.826124 13.470334 12.805317 11.722415 11.290077 13.554299 11.078528 9.359108 9.854702 3.357819 7.671480 12.190167 10.9587948 6.8759950 8.9547550 8.3066879 8.8991932 10.4841970 6.6797475 8.5583335 11.7802452 6.2564427 2.3160009 5.1111816 7.7132188 10.3620003 9.6976699 9.1035184 9.3033474 13.7048718 3.7203879 12.8184356 9.7078119 10.4525386 9.9708463 11.7287564 10.3490988 10.4693283 8.6003136 -1.7715199 8.7981267 1.5504574 10.9022877 7.4158888 10.0740388 10.1986428 7.9462133 13.5282100 10.0294369 9.3416280 12.9189169 11.3545961 9.6951233 0.2284801 TCGA-A8-A0AB 54 0 NA 518 breast stage iia t2 n0 m0 female 2009 NA no infiltrating lobular carcinoma NA NA NA 5 2 3 NA NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 10.4772237 10.3733957 12.2806974 9.9218276 8.4493014 8.8131713 9.9495469 9.7652591 9.4535509 8.8040481 11.3214474 10.6882416 3.4017124 13.7420777 4.4192018 7.3524990 7.1760165 9.0157036 8.2596929 13.4214044 1.8515192 14.2683312 5.6215889 8.6308026 11.5095988 3.6880125 -0.9559557 7.0748276 9.3989604 4.0441580 8.6551847 7.8943467 -0.9559557 3.9268060 10.3427954 10.9429503 10.1888182 11.6894806 11.0926468 12.1959693 7.2487312 12.2154931 14.7730105 7.5730048 9.7852056 11.4442389 12.4414335 5.4450380 3.1316224 9.9544280 10.9963552 -0.9559557 10.5541823 3.3295685 3.6588741 4.4192018 9.6263019 12.3782936 10.6835007 11.8684226 13.0094933 9.1309597 11.5252025 11.1352565 11.4510293 11.5946662 5.8833642 12.3401441 12.6225916 -0.9559557 10.2389168 9.4819120 4.3800852 3.5677280 11.1294664 10.9542405 10.6335771 10.4380867 0.3661403 10.2422980 12.9382672 13.2479285 11.1289684 9.5035916 0.538720 1.512000 1.509700 0.011400 0.011400 0.068309 0.000000 0.095653 0.252230 0.229950 0.229950 0.239850 -0.328320 -0.328320 -0.792440 0.130360 0.130360 0.078727 0.078727 0.106280 -0.784780 -0.314010 -0.525940 0.305530 0.338040 0.086233 0.086233 0.086233 -0.274040 -0.315170 -0.335600 -0.315290 0.011400 0.105260 0.073115 0.000000 0.000000 0.095653 0.252230 0.303780 0.049966 0.049966 0.262630 -0.368840 -0.368840 -0.368840 -0.368840 -0.328320 -0.315990 -0.797700 0.130360 -0.792600 -0.783190 0.078727 0.078727 0.078727 -0.968960 -0.784780 -0.310700 -0.796040 -0.521740 0.338040 0.103070 0.086233 0.086233 -0.296430 0.118140 -0.313300 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.194 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 -0.109 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.194 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 -0.109 7.9525526 12.8881301 9.4159365 9.4327154 3.7990458 11.0108456 -1.9556758 -1.9556758 8.6025808 7.8849379 -1.9556758 7.3624997 4.1316224 10.2090669 9.3138712 1.8515192 6.7990471 9.7001378 12.0000822 9.4343288 9.9950475 7.6440726 9.7315356 1.6291001 10.7350310 9.4699004 2.9021315 NA 10.9204851 2.7990458 11.6071178 11.8646381 7.3202843 9.8639398 5.5519558 9.4082947 6.8833642 -1.9556758 2.2140937 2.2920749 9.5642875 9.3156231 9.8279767 3.8770473 9.0136903 5.2339839 10.3859567 6.8833642 9.9469118 NA 11.6566829 0.3661403 4.0441580 10.0366628 5.1401897 1.5036032 8.4881394 6.1837108 4.2140859 2.1316224 13.7233376 -0.3708999 9.9870410 NA 9.0292903 3.7446024 8.3851225 8.5509634 13.3394378 6.1102484 8.6835007 13.7420777 10.0926468 11.2731289 13.4214044 12.5810749 9.7923529 11.4940540 13.4213366 11.1606664 9.9544280 10.0689533 0.6291001 7.4725203 12.1097444 11.5164700 8.9555520 8.9382199 9.9760056 10.0406334 10.4476833 4.8123442 3.0441668 11.3214474 3.7990458 3.2536112 9.9367027 7.2611725 11.6073562 9.8019666 8.5677219 7.2801741 13.6341914 2.7445917 13.5096562 10.1888182 9.2663511 10.3312951 11.6547235 9.4912432 10.6902686 9.1856285 -0.9559557 8.6714841 3.0885487 10.5541823 6.3479402 10.3297211 9.6263019 7.8500487 13.6635489 9.5963487 9.7467656 13.2267483 11.1840310 10.2240691 -0.3708999 TCGA-A8-A0AD 83 0 NA 1157 breast stage i t1c n0 m0 female 2007 NA no mixed histology (please specify) NA NA NA 5 5 2 3 NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.121176e-07 10.7170118 10.1830488 11.6930997 10.3018499 7.8376796 8.6625929 10.5750572 10.1568569 9.6587094 12.6658855 11.6929099 10.7687321 NA 13.5018914 5.9913314 9.6664658 6.4949931 8.5002105 9.4032767 12.6727373 -1.1985930 12.6753344 5.9512521 8.9027067 10.4743732 7.0303250 NA 10.5647058 9.0949776 0.8014898 8.6391337 7.6375559 -1.1985930 4.6343958 10.4849392 11.8364767 10.8404248 11.6377535 10.0140022 11.7850339 13.9785360 9.8231800 15.0163372 8.1905561 10.2634968 11.0845942 10.4381304 4.2933558 6.3013517 9.0612491 12.2210711 0.3864799 11.2670722 4.9307894 6.7787855 5.7322421 10.5019455 11.3779902 10.2812861 12.5860385 12.9643692 6.9359323 10.8969029 10.7996414 11.6709069 11.2298660 4.5563926 11.5920580 12.4281275 -0.1984274 10.2345696 9.2371760 3.3275724 6.3092999 9.8190103 9.7196238 9.8141304 9.9080688 1.6088565 4.8238716 13.0608078 12.4245871 9.8015058 9.3732584 0.00194180 0.00194180 0.10045000 -0.00041585 0.00055459 0.01480200 0.01140000 0.73587000 -0.79736000 0.01102200 0.01102200 0.01102200 -0.77753000 -0.77753000 -0.00163890 -0.00163890 -0.00163890 -0.00027724 -0.00027724 -0.78933000 0.00861350 0.02244400 -0.78159000 0.63865000 0.66456000 -0.02890100 -0.02890100 -0.02890100 0.00220810 0.00194180 0.00194180 -0.03844200 -0.00781760 0.01516800 0.01480200 0.01140000 0.00276040 0.00069327 -0.80109000 -0.00968060 0.00597000 0.00597000 0.01810300 0.01126100 0.01126100 0.01126100 -0.00534730 -0.77753000 -0.77753000 -0.02195000 -0.00163890 -0.00163890 -0.00163890 -0.00027724 -0.00083160 -0.00083160 -0.78083000 0.00277910 0.01363200 -0.77116000 -0.78159000 -0.80459000 0.01112100 -0.02890100 -0.02890100 0.00777830 0.01000600 0.02412700 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 9.3892833 13.7165916 7.8404248 9.6007875 1.1234013 10.5999776 -0.1984274 NA 8.1098448 8.3445378 NA 7.2205389 1.6088565 10.3435704 9.0434889 0.8014898 7.3713611 9.8662486 12.9222297 9.2288187 9.5043711 8.7263183 10.5208946 5.1413551 9.7128979 10.0932521 6.6088610 NA 11.2506545 2.9714240 12.8081826 11.7903680 7.7351965 10.3240874 8.3618385 9.2392579 4.1938269 -0.1984274 -1.1985930 4.6088625 8.8622018 8.6216849 11.1691936 3.5563926 0.8014898 5.6088595 9.5918544 4.8675950 9.9695511 NA 10.9572728 2.9714240 9.5959217 9.6786672 6.0734347 -0.1984274 8.9826582 7.2527165 6.9204469 NA 13.4817555 -1.1985930 9.9537906 NA 6.2023844 4.1590559 8.5260199 7.5696901 14.285369 5.445363 8.870284 13.501891 9.599289 10.525593 12.672737 13.123434 9.487131 10.859498 12.895996 8.938497 9.061249 10.223571 1.386480 7.231958 10.604022 11.138570 7.720369 8.907414 8.653255 8.793028 10.170072 7.393963 7.123434 11.692910 6.653255 3.501949 5.595921 6.649878 10.505409 9.076466 7.624873 8.187368 12.552841 4.010959 12.128375 10.840425 10.266562 9.191675 11.855601 9.320159 10.300853 9.671100 NA 9.117968 1.971442 11.267072 8.894263 10.461056 10.501946 7.495237 13.126454 10.263497 10.690629 13.016432 9.995031 9.190599 2.123434 TCGA-AC-A23C 62 0 NA 29 breast stage iib t2 n1 mx female 2010 NA NA infiltrating ductal carcinoma 1 white NA NA NA 4 2 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 4 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.392901e-06 6.242351e-07 10.210843 10.599179 12.023315 10.160922 8.466535 9.893028 10.529838 10.422313 9.495080 14.634994 10.801409 11.053949 1.851839 15.249845 3.693130 9.185726 7.408970 8.740568 8.614484 13.149649 NA 13.038043 5.888914 8.946448 10.976377 8.700448 2.967298 12.457772 9.005799 2.436775 7.370150 7.770688 -1.733124 5.466536 10.562058 10.689978 9.641359 11.073412 11.138575 12.094106 6.514790 10.676784 14.733194 9.067892 9.942820 10.092219 11.540950 5.782563 4.495682 9.007487 11.572782 -1.733124 10.279138 6.505267 6.566071 5.542989 11.150079 11.959260 10.407373 11.593292 13.217737 8.406414 11.529251 12.251930 11.683528 11.294769 5.844290 12.524987 10.641630 -1.733124 10.237688 9.152559 4.150243 6.131048 8.730387 10.221059 10.059246 10.173753 3.173751 9.806021 12.752503 11.382394 9.983682 9.180500 -0.0243880 -0.0243880 1.2576000 0.0023581 -0.0111980 0.0122370 0.0505340 3.1028000 0.1079900 0.0178240 0.0178240 0.0235660 0.4101100 -0.3690600 0.2417100 -0.2027400 -0.2027400 0.0203430 0.0319990 -0.0113350 -0.1497800 0.0026357 0.0210430 3.6569000 0.4344600 0.0447150 -0.4211200 -0.0495590 2.1290000 0.0055529 -0.0243880 -0.0040162 -0.4138800 -0.4546900 -0.0220820 -0.0131970 -0.0131970 -0.4748000 0.0056919 0.1079900 0.5056800 0.0145640 0.0178240 -0.0103700 0.0000000 0.0000000 0.0000000 -0.3690600 -0.3690600 0.2417100 0.2384500 -0.2087100 -0.1958700 0.0203430 0.0319990 0.0502500 -0.0113350 -0.1497800 -0.0113050 0.0410530 -0.4300700 -0.4068300 -0.4714100 0.0447150 -0.4211200 0.0663720 -0.0263040 0.0390540 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3576367 12.4773057 7.2384067 9.6155908 3.7587189 11.0568037 1.7263081 -0.1481610 8.4000050 7.1060666 -0.7331235 7.9845392 2.8518190 10.8623532 9.3622597 -0.7331235 8.5487926 9.1510330 7.4714338 8.6494865 9.3961456 8.4504978 9.9441418 2.1737671 8.9664351 9.3616002 2.5147787 2.3543393 10.0420614 4.6244168 12.1379015 12.0707919 7.5568815 10.2714342 9.7751526 8.3503421 4.5522664 1.4368015 0.5888046 3.4367882 8.0514977 8.7597171 10.4436591 3.9392924 8.6803106 4.2441412 9.5927302 6.1677292 9.3766932 -1.7331235 11.5245451 2.2668765 4.8060198 9.8402826 6.9910354 6.8442915 9.5441500 9.0620907 8.6100482 0.5888046 13.3277696 0.5888046 10.6773140 -1.7331235 8.0284139 4.5706451 8.3002857 9.0620907 12.862213 5.149507 9.032563 15.249845 10.776885 11.682340 13.149649 12.288970 9.146086 10.942158 12.723089 7.728342 9.007487 9.682604 1.074231 8.309890 13.033599 11.025294 8.151033 9.063714 8.811827 8.303036 10.631068 6.974222 8.056396 10.801409 6.654879 4.048219 4.514791 7.107420 10.983468 10.594135 7.218148 9.274591 12.194270 8.436788 12.206518 9.641359 10.271785 9.345681 12.191026 9.657569 10.977454 9.331605 6.197600 9.330689 8.364895 10.279138 7.829105 10.521891 11.150079 8.151033 13.308222 10.274591 10.322484 12.309548 10.380605 10.345347 2.790418 TCGA-AC-A23E 50 0 NA 698 breast stage iib t2 n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 white NA NA NA 2 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 10.6497433 10.3070766 11.7324342 9.9924409 8.2775324 9.0740850 9.6144487 9.9072765 9.9377266 13.6024776 9.9300611 10.7484185 1.7497059 12.6202748 3.3346684 9.5232887 7.3482599 8.4714204 10.0988302 12.9355326 0.6122109 13.3215818 2.4601921 9.1231582 10.1828111 4.8294285 -1.7098115 9.5482453 11.4907071 1.6122109 7.7700487 8.1971587 -1.7098115 4.3346612 10.0304706 10.5857502 9.4495090 12.7105575 10.6206250 11.7209821 1.9907008 11.5259833 15.4350260 8.4254518 9.2488209 10.2180462 11.6480951 4.6121991 2.3777346 9.6356735 11.6086698 0.8752296 11.4385859 7.4425529 6.1667857 5.3455490 10.7468793 11.8820243 10.5937637 12.4168114 12.8689947 8.3764046 11.0767421 10.7728998 11.1255292 11.4822528 5.3777311 12.4167307 8.8883207 -0.7098115 10.4208388 9.2902682 2.3709175 6.8410145 10.6048515 10.5250857 9.8686409 9.5417506 6.2386359 8.2386355 12.7541757 12.0159540 9.9587100 9.1858435 -0.114780 0.638710 0.638710 0.000000 0.054773 -0.129890 0.228130 0.286330 0.286330 0.209140 0.209140 0.225660 0.219650 0.212480 -0.178490 -0.178490 -0.178490 0.268330 0.268330 -0.110730 0.278260 -0.487820 -0.497950 -0.055339 -0.055339 0.186510 0.186510 0.186510 -0.057074 -0.114780 -0.114780 -0.115440 0.000000 -0.123390 -0.131310 0.228130 0.228130 0.286330 0.286330 0.286330 -0.128290 -0.130010 0.209140 0.248650 0.248650 0.266290 0.266290 0.212480 0.236790 -0.178490 -0.178490 -0.178490 -0.178490 0.268330 -0.518020 -0.518020 -0.113060 0.278260 -0.501920 -0.510080 -0.506150 -0.055339 -0.059093 0.186510 0.186510 -0.057074 0.066560 -0.097058 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 0.000 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 0.000 9.6178208 14.3046811 7.5848889 10.0919767 1.9907008 10.2495457 -1.7098115 0.8752296 8.1263188 8.7165331 -0.1246917 8.5457808 1.6122109 10.0543105 8.8371627 0.2903064 7.7373515 9.1247394 11.2515370 9.8728808 9.2317633 7.8099044 11.7367054 4.4601921 7.4501398 9.8859919 2.7497059 2.4601921 10.3154078 1.6122109 13.0230186 12.3602214 7.9872356 10.6017327 8.6985981 9.1136354 5.6825845 2.4601921 -0.1246917 1.0976108 7.9068173 9.1986609 10.1915123 2.7497059 6.0747730 4.8752296 9.9309651 6.8752308 9.5106465 0.2903064 11.1016429 3.9907099 3.4997184 9.9846131 5.3544169 1.9907008 10.0173378 8.7102286 6.2618110 1.2902474 14.2525995 1.6122109 10.3620658 NA 7.0451557 5.0846851 8.0960119 9.1482493 11.981122 4.962692 8.192643 12.620275 10.290663 10.701779 12.935533 11.967327 9.285329 11.085090 13.100288 9.712859 9.635674 9.162943 -1.709812 7.197159 11.373249 11.4174566 6.3346630 8.9287040 8.2283776 8.3948669 10.4947232 7.0079445 6.8294272 9.9300611 6.4551760 4.2210032 7.7435392 7.1679821 12.0298379 10.6815118 8.6825856 8.1466939 12.8179285 3.8448576 10.0064231 9.4495090 10.4384270 9.5328470 11.4633207 9.4899407 10.7280203 9.6082461 2.9907008 9.2170683 3.6478210 11.4385859 10.1314394 10.2986969 10.7468793 6.9159773 14.3519348 10.0749030 10.4592537 13.1650095 10.2338820 9.4831775 -0.7098115 TCGA-AC-A23G 76 0 NA 2248 breast stage iia t1c n1 mx female 2006 NA no infiltrating lobular carcinoma 2 white NA NA NA 2 4 NA NA 3 3 2 4 4 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 9.9531475 9.7131966 11.5107038 9.4403863 8.4878866 8.2877124 10.0223274 9.7206718 11.4915327 10.3323098 10.8810384 10.3573027 5.5618882 12.7139771 2.9989537 11.4790988 6.7094450 8.3339353 9.2119450 11.6173366 NA 13.1981773 5.2119467 9.7459968 9.6713765 5.5168000 NA 12.6494122 9.3850097 3.9318343 8.3533008 8.0512720 -0.4605682 5.8249206 9.4313033 9.8098149 10.0883415 10.4516603 9.2468786 10.9036542 1.5395311 9.6662240 15.4270258 8.0903819 9.8782002 11.2334420 10.9226838 5.1542308 0.5395311 8.8109825 11.6832216 NA 11.0066156 6.1093752 6.4343380 6.0941094 9.9058417 11.4739475 10.3842253 12.8421585 12.1155314 9.3323098 10.7910019 10.5329462 11.0413567 10.7945481 4.2944075 11.2185597 10.4643320 0.5395311 10.5839136 8.6401820 3.7142455 5.6056099 11.0478095 9.4628470 10.1905713 9.2571959 5.1542308 10.0020217 14.0045119 12.4867912 9.9210624 10.1244821 0.0026945 0.7969900 0.8207900 -0.0016629 -0.0016629 0.0038854 0.2174500 -0.0145810 -0.1972500 0.2111500 0.2111500 0.2111500 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0044312 -0.0044312 -0.0027707 -0.0048461 -0.0058140 0.1910200 0.1863000 0.1816400 0.1761800 0.1761800 0.1634700 0.1977100 -0.0161860 0.0026945 -0.0079285 -0.0016629 0.0038854 0.0038854 0.2114600 0.2114600 -0.0145810 -0.1972500 -0.2221900 0.2120700 0.2094700 0.2111500 -0.0085766 -0.0085766 -0.0085766 -0.0085766 -0.0092666 0.0020805 -0.0092666 -0.0092666 -0.0092666 -0.0143320 -0.0044312 -0.0044312 -0.0044312 -0.0027707 -0.0088526 -0.0092666 -0.2265000 0.1910200 0.1863000 0.0016642 0.1761800 0.1634700 0.1977100 0.2038100 -0.2504300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 0.000 9.1150587 14.8940444 9.2225141 10.8631373 NA 10.7019109 1.8614393 1.8614393 8.6506551 9.6493501 3.2399632 8.8546689 5.0941094 9.5395194 9.3708269 2.9989537 9.2207580 9.4820341 11.6049357 9.8726749 9.2422116 6.9489103 12.4851463 2.9989537 8.9253820 10.5451440 4.9657843 NA 10.9615843 3.2399632 12.9088442 12.2181197 9.3110090 9.6176704 8.0152528 9.6015656 4.7094450 3.1244770 1.1244605 9.0669965 8.9699721 9.7969074 8.9403991 5.0941094 8.1822210 7.4464101 10.1797644 7.1977308 9.6042623 -0.4605682 12.4369869 5.5168000 4.8970710 9.3779356 6.6906881 2.1244936 10.3904877 9.1761442 4.8249206 1.8614393 13.6716176 -0.4605682 10.6129917 NA 8.5423347 6.4937162 7.7779240 9.2189996 12.8977353 4.6687999 8.1394321 12.7139771 9.8272319 10.5893681 11.6173366 11.7556591 8.7731392 10.6342570 14.2189996 12.0035547 8.8109825 9.4893462 -0.4605682 7.2674403 10.7568714 11.690536 6.748972 9.213712 9.135709 7.694338 10.056697 7.070901 7.482034 10.881038 8.592088 4.493718 6.397500 7.167418 12.159510 10.260619 7.865140 8.883815 12.032875 5.294408 10.516871 10.088341 10.194156 9.650655 10.661700 11.162486 10.462847 9.072849 NA 9.508849 4.583916 11.006616 9.311009 10.886211 9.905842 7.626982 14.255750 9.830690 10.170697 12.983758 11.100807 8.982463 1.539531 TCGA-AC-A23H 90 1 174 81 breast stage iia t2 nx m0 female 2009 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 1 1 NA NA 2 2 4 1 1 1 0 4 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 4 0 1 0 4 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 0 0 0 0 4 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 0 4 0 0 4 1 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 4 4 6 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 4 0 7 7 0 4 0 0 0 4 0 0 4 0 0 4 0 1 0 0 0 4 0 4 7 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0.000115865 3.64484e-05 9.8732686 10.2292121 11.7010103 9.9209877 8.3293676 10.5003302 9.5521413 10.7080845 11.3263616 15.7998129 8.8778384 11.4151808 2.8361867 16.4579450 2.1581108 8.2068669 4.2956128 9.9196586 4.8361817 13.5548905 -0.7487960 13.0846011 0.5731806 9.2267065 10.8757838 10.6743326 4.9791382 7.3701582 10.6688056 2.3386811 8.7855195 6.9236424 NA 4.4410385 11.0511055 9.5737083 9.8855741 11.6935124 11.9828540 11.4758215 13.3079391 9.5492793 14.9367869 7.4492692 10.2925336 11.6967490 11.1475491 2.8361867 5.4009648 9.6004980 11.1793650 -1.7485536 10.7327640 4.5550001 5.1338594 4.4800324 10.1749157 11.6900086 9.7629695 11.2290333 13.3429827 7.1849071 10.6845414 9.8944596 11.9540388 11.0233251 5.4009648 11.8660416 10.5779272 NA 10.2578935 9.6065679 2.2521128 4.4410385 11.2095882 9.8441410 9.7029430 10.0019238 1.9516624 9.9058528 13.0640459 11.4737098 9.6520962 9.1959288 -0.01752900 0.36395000 0.86037000 0.61027000 0.52923000 0.03284500 0.00000000 -0.03763100 -0.00491770 -0.97630000 -0.49277000 0.88190000 -0.00899060 -0.47363000 0.45700000 3.65690000 -0.00443120 -0.50339000 0.43210000 -0.00498440 -0.01144400 -0.01119800 -0.02657700 3.65690000 3.65690000 -0.08604900 -0.06531300 -0.06531300 0.83888000 -0.06324900 -0.01752900 0.37858000 0.58695000 0.03284500 0.03750000 0.00000000 0.00000000 -0.01945200 -0.00491770 -0.00097017 -0.01395300 0.31466000 -1.01590000 0.00791750 0.44510000 0.44647000 0.42351000 -0.44663000 -0.49434000 0.45700000 1.20410000 -0.00443120 -0.03258700 -0.50339000 0.43210000 0.41881000 -0.02726100 -0.01144400 0.01712400 0.45837000 -0.02657700 -0.53185000 -0.47997000 -0.08604900 -0.06531300 0.88206000 -0.01505400 0.98349000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.587 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 -1.006 0.449 0.424 0.424 0.428 0.000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.587 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 -1.006 0.449 0.424 0.424 0.428 0.000 7.5595561 12.9147749 2.5731564 9.0035975 2.1581108 11.5528559 -0.1637527 NA 8.1261980 6.8399319 NA 8.0697988 1.7106577 11.0896329 8.7320069 3.3386811 5.2624444 9.5966219 10.8262832 10.5053596 9.8375828 7.8229697 10.3236844 1.0585936 8.3037849 10.0625915 1.4211560 NA 10.1815845 2.2512040 11.6353260 12.7635869 7.0777653 9.7903755 7.2763561 9.0793533 5.4896200 1.4211560 -1.7485536 4.2735830 8.1819543 8.6153516 10.5694771 2.1581108 9.0744169 6.4991443 10.3613738 6.5319880 10.0670003 -1.7485536 8.5446886 2.6435330 3.5731442 9.6927863 6.7292577 2.4211290 8.2241966 7.2680254 5.0585719 0.8361665 13.6871800 0.5731806 10.9594385 NA 8.7490686 3.2512192 8.2270648 8.2915064 13.640578 7.228496 8.666959 16.457945 9.961007 11.253856 13.554891 10.016917 9.294928 10.301065 12.668872 6.630595 9.600498 9.368210 -1.748554 9.263841 12.337519 11.0759767 6.4060349 8.8905573 9.0745841 8.5168319 10.9287382 4.4991443 9.0649979 8.8778384 6.8659262 NA 6.8134593 8.8752720 11.7858844 10.5643832 7.9429601 9.9568492 10.4734079 3.9791382 12.5233581 9.8855741 9.9174407 10.7106484 10.8837577 9.7956983 10.5652335 9.4465889 3.5366249 8.9113198 3.6435330 10.7327640 8.0276500 11.3095468 10.1749157 7.3386793 12.7502529 10.5938471 10.5812933 12.0256950 10.1084203 9.4267663 -0.1637527 TCGA-AC-A2B8 84 0 NA 45 breast stage iib t3 n0 (i-) m0 female 2011 NA NA infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.323542e-06 8.323135e-07 10.77526664 10.41476915 12.03601783 10.55594745 8.15205409 9.32240501 10.12951666 9.84569546 9.76025588 12.43184262 11.38204802 10.37289411 0.01120936 12.57989314 4.16096858 10.11680568 5.82500455 8.49100486 10.24514361 12.46847704 2.01120936 13.07571460 5.44585248 9.51665895 10.86180195 7.05288318 NA 10.83123384 9.32126904 4.14050874 8.15715642 8.19237666 -1.98850436 5.15077493 10.08536596 10.46706536 10.13921878 12.37214008 10.31728609 11.88754953 9.54211834 10.86648226 15.17105636 9.00999820 10.11746025 11.98267816 11.63201700 4.93008916 4.05562083 9.52149405 11.78075238 NA 11.35843055 7.27566732 6.75269106 5.35107350 10.48594440 11.92093004 10.57155727 12.27801098 13.18349566 7.43748910 11.14115137 10.83183624 11.34856761 11.59865040 5.22067820 12.17879940 12.04628123 0.01120936 10.38544883 9.00628484 3.36489455 6.32863723 10.80929120 10.29199521 10.07664059 9.71166422 4.59618976 9.29604849 13.59089393 12.77739097 9.97231226 9.46192017 -0.00407200 0.44936000 1.32510000 0.00722170 -0.00968060 -0.00152430 0.46656000 -0.00166290 -0.00277070 -0.00705760 -0.00705760 0.46656000 0.01992300 0.00419030 0.00360760 0.00360760 0.00360760 -0.00010703 -0.00010703 0.45598000 0.00555290 0.00885360 0.01488800 0.01488800 0.00638710 0.01293400 0.01293400 0.01293400 0.01209700 0.01391100 -0.00407200 -0.00238860 0.00722170 -0.00152430 -0.00152430 -0.00138580 -0.00138580 -0.00166290 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00705760 -0.00083160 -0.00083160 -0.00083160 -0.00083160 0.00419030 0.00419030 0.00360760 0.00360760 -0.49663000 -0.49663000 -0.00010703 -0.00010703 -0.00010703 -0.00761010 0.00555290 0.01014600 -0.48984000 0.01488800 -0.46642000 -0.01422800 -0.47807000 0.01293400 0.01209700 0.00930980 0.01992300 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.4706560 13.4083977 7.3621639 9.8934854 2.5889484 10.2001223 0.8186052 0.8186052 8.3229728 8.2989369 -1.9885044 8.6701322 3.4706540 9.8792752 9.2466404 0.3331947 10.1151679 9.4737266 10.6113697 9.1698341 9.6826328 8.0460233 11.3115770 4.1811503 10.1905115 9.9697772 4.0986890 -1.9885044 10.1301655 4.0773114 12.0574106 11.9196171 8.1079394 9.9207426 8.7185836 9.1151678 7.5600462 1.3331375 1.0112094 3.2591519 8.5848716 8.3742640 9.9686893 6.7459338 8.4254232 5.6111370 10.1317864 7.0880398 9.5080782 -1.9885044 10.4401080 3.5658165 3.9181190 9.6366090 5.3010571 2.9654149 9.9924349 9.6787795 6.2543975 NA 13.4742698 1.8185643 9.8999677 NA 9.0112245 4.5961898 7.9030081 8.2662529 12.87022530 4.71166560 8.81050609 12.57989314 10.42788740 11.14693373 12.46847704 12.65011283 9.46444875 11.25542620 13.21671226 10.76819764 9.52149405 10.08000270 0.01120936 7.43118500 11.06124312 11.35232625 7.67300230 8.70992919 9.30641947 7.52889398 10.15413874 7.47883028 6.93603718 11.38204802 6.47474914 2.71167110 5.94786249 6.68689966 11.97493335 10.43565318 7.56964526 7.91359973 12.81303382 5.63327717 12.73075498 10.13921878 10.27331924 9.39762586 10.62155723 10.39330808 10.64308360 8.94712610 -0.40373271 9.18996388 4.31500823 11.35843055 8.17989665 10.51703598 10.48594440 7.80238711 13.93749726 10.22615061 10.39276734 12.70285893 10.17801518 10.07056885 0.01120936 TCGA-AC-A2BK 78 0 NA 2222 breast stage iiia t2 n2a mx female 2006 NA yes infiltrating ductal carcinoma 6 black or african american NA NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699307e-06 5.895554e-07 10.1995342 9.4973277 11.5357516 10.8677143 9.3224471 9.1617703 8.7709625 10.8545684 10.6570027 10.5062374 10.7600963 10.6184899 0.3552418 10.6202497 0.3552418 10.4970086 6.3495741 8.2606077 10.3474511 9.5005161 NA 10.2572189 8.2859579 9.6027033 10.4179415 5.7475378 2.0556469 8.2439642 11.4273534 2.2621024 7.6055195 7.9212751 4.7302595 4.2378620 9.6061113 10.4142272 9.7045020 9.7122230 9.9504783 10.5561194 1.9401668 8.8289267 10.7833192 9.9943218 9.0214447 11.5728756 11.1987493 6.9439354 NA 10.0526228 10.4426836 NA 10.6669691 4.9250785 6.2621118 4.1625726 7.3996146 12.3284697 8.6417787 11.6654075 12.5678692 7.5049675 11.0651661 11.0217200 11.5025847 10.9972725 6.9514106 10.9597740 3.2132073 7.4186158 9.6481176 10.5188705 5.9773463 3.7127718 11.5237362 9.5579568 10.9486119 9.9490788 -1.6447582 7.2770614 12.6367162 13.0071133 10.8296872 9.7373043 0.6360900 1.7803000 0.9253300 -0.7910400 0.0736900 0.0495400 0.4021100 1.1661000 -0.1080200 0.0706730 -0.0043527 0.6883100 0.3111300 0.0000000 2.2669000 -0.0225710 -0.0225710 0.0586520 0.0623660 -0.4823900 -0.3768500 -0.7926000 -0.0103700 -0.4055000 -0.3807800 0.4337800 -0.0030475 -0.0820040 0.0182430 -0.3634500 0.0472680 -0.0374900 -0.7910400 -0.8126000 -0.8145900 -0.8147400 -0.7980300 1.1661000 -0.1080200 -0.8235000 0.0479780 -0.3530500 0.0744080 1.2852000 1.2852000 -0.0537460 -0.1352300 0.0000000 0.0000000 -0.7967000 -0.0225710 -0.7999500 -0.7999500 0.0586520 0.0623660 0.0623660 -0.7944400 -0.3683900 -0.7930500 -0.3297100 -0.0103700 -0.4055000 0.0219550 -0.8235000 -0.0820040 0.0182430 -0.0237030 0.1577100 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.413 -0.815 -0.108 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 0.427 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.413 -0.815 -0.108 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 0.427 5.82282700 12.70408723 -0.05979566 8.75289541 1.18097530 13.22438083 -0.64475816 NA 9.26960594 3.30942360 6.23786387 10.06214843 6.73459854 11.17898603 9.70726421 3.96993327 4.13657695 11.39190957 9.85755543 10.02676189 8.18622717 8.46374505 10.07075385 -0.20656186 7.88465103 9.39688002 3.64062093 NA 9.73730431 -1.64475816 12.09763548 12.41211246 8.99636926 8.04172157 7.98457739 11.59779945 7.46374505 1.52516685 0.35524184 2.74753778 8.94206051 8.37342114 8.86202420 8.65442874 9.62349379 6.20696940 9.98912424 6.96624587 10.69507079 1.35524184 10.64466333 5.87878173 4.39961546 10.02999128 6.37481171 4.48450553 7.13000830 6.36644812 5.99184606 NA 13.81430014 NA 10.82129726 -0.05979566 9.70947020 6.47934214 8.87878265 6.57922240 9.938952 9.184151 8.635992 10.620250 9.264364 10.916747 9.500516 10.294433 9.288912 10.883186 13.342662 11.300116 10.052623 9.041721 5.925076 7.880742 11.996144 11.139447 5.515091 6.902116 10.334289 8.983666 10.264990 3.564671 2.055647 10.760096 11.663844 NA 11.155514 9.058389 12.457278 10.938539 8.115109 8.958847 8.846072 4.285957 9.122147 9.704502 10.241679 10.054793 10.995466 10.373769 10.462438 8.545045 NA 8.178030 5.162577 10.666969 8.272593 11.044345 7.399615 8.542573 14.944009 9.848075 9.593028 11.702565 10.825625 9.920323 1.525167 TCGA-AC-A2BM 41 0 NA 3022 breast stage iib t2 n1a mx female 2005 NA no infiltrating ductal carcinoma 1 black or african american NA NA NA 1 1 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 10.90504367 10.14681023 11.68990094 9.77700934 8.10131810 9.59590734 9.85969209 9.69291098 9.56798136 12.97755740 12.42061580 10.49259950 2.98824840 11.52758291 4.04965690 7.63712114 6.40720827 8.64708781 7.81120705 12.34934103 0.04963077 14.58683396 1.27202319 9.54654300 10.67445147 9.27446156 0.04963077 11.82282820 9.95704747 0.46466827 7.17893868 6.12290459 NA 5.06460698 10.42614323 11.04848149 10.89592989 10.44946800 8.96154722 12.12669425 -0.53533173 9.93586059 15.12854344 8.27622865 10.05481267 12.05855144 11.25055460 3.98825749 2.71261779 9.34886401 11.76447392 -0.53533173 10.89775729 5.39542960 6.84407175 5.00385406 10.08216102 11.66237095 10.39727738 10.51249910 13.79728957 9.07017301 11.24461804 10.84924792 10.38019945 11.33177916 5.63461940 11.62928621 11.52842564 -1.53533173 10.33929074 9.74023613 3.75194568 5.97248818 9.73265062 9.78831132 10.79505024 10.73001552 5.41888818 2.92411889 12.16100906 10.65049810 10.04636487 9.11574518 0.609190 0.433610 0.422510 0.036229 0.047552 0.072684 0.067661 -0.278700 -1.027100 3.656900 1.692200 0.406570 -0.273680 0.061651 0.049966 3.389300 -0.663460 0.094346 0.094346 -0.630740 -0.640850 0.000000 -0.295440 -0.281920 -0.281920 -0.427350 -0.427350 -0.094196 0.648730 -0.308150 -0.259860 -0.656500 0.036229 0.072684 -0.034631 0.079591 0.094637 -0.289280 -1.032700 -1.076200 0.073833 0.073833 0.072844 -0.663370 -0.663370 -0.663370 -0.881570 0.061651 0.061651 -0.309790 -0.666330 -0.669700 -1.088200 0.094346 0.094346 0.067088 -0.630740 -0.658640 -0.349620 -0.668090 -0.295440 -0.281920 -0.084262 -0.427350 -0.094196 0.648730 -0.094856 0.031999 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.295 -0.295 0.000 0.000 -0.427 -0.427 0.430 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 -0.183 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.295 -0.295 0.000 0.000 -0.427 -0.427 0.430 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 -0.183 8.6668173 11.7136588 7.8000839 9.4689140 4.3715867 10.0655357 1.2720232 -1.5353317 8.7843656 6.6545186 NA 7.3538931 0.4646683 9.4072081 9.1564371 3.4646944 12.9826089 10.3602688 7.8222458 9.8998428 9.5980862 7.7291360 9.0729483 2.3715867 10.4337202 9.9897249 8.1926139 -1.5353317 10.6689590 4.9241236 12.0464825 11.6691118 7.0231145 9.0812424 10.1255807 8.6886951 2.1651402 2.1651402 0.7865964 6.3715833 10.0211996 9.3180031 8.9931476 2.0496656 8.4605878 7.1926144 10.3331303 4.2975803 9.5097707 -0.5353317 9.8194938 3.5521557 4.1371182 10.3822334 6.7631234 5.9076382 10.0197620 7.2460536 7.4562156 -1.5353317 13.1709737 0.7865964 10.4661018 NA 6.0940502 4.3226781 8.2361831 7.5888151 15.4979175 6.5090877 9.2061604 11.5275829 9.3373683 10.7584525 12.3493410 11.8039868 8.8602275 11.2712432 13.4065664 10.1026768 9.3488640 7.7149921 0.7865964 6.9605488 12.2717465 10.448756 8.487061 8.390990 9.785494 9.435518 9.661505 7.086746 7.797849 12.420616 6.822246 1.634640 7.639619 7.739631 10.851634 9.713214 9.685676 8.751251 13.896354 6.992170 11.907320 10.895930 10.269228 9.057150 10.230394 8.788874 9.901925 8.712621 NA 8.399136 6.839733 10.897757 5.219583 9.771894 10.082161 7.811207 12.964913 9.983838 9.723260 11.952408 9.625195 9.079403 1.049631 TCGA-AC-A2FB 65 0 NA 1234 breast stage iia t2 n0 mx female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 10.8157156 10.0834993 12.1704803 10.2540468 8.2219037 9.6245524 10.4589904 9.7958593 10.1409611 11.5142379 11.6953649 10.6351779 4.4192422 16.1648194 4.2328296 9.0168982 6.9101222 8.9616861 11.2380647 13.4635933 1.6967951 13.2653007 6.4246954 9.3413518 10.2382584 5.0042047 NA 10.5547556 8.9101219 3.3290375 8.1805905 7.4082694 0.6967951 5.4301280 9.9447021 10.5646710 9.3268595 12.5190267 9.9941493 11.9318314 11.6023120 11.4656205 14.5920090 8.3942702 9.9950663 10.9306339 11.7677005 5.8586624 2.7671675 9.4442962 12.3034573 NA 11.2550039 6.2574897 7.9275155 4.3055839 10.7199744 11.8102562 10.3100115 12.3045672 12.7561190 7.5891657 11.1840116 10.7279519 11.4781342 11.5934097 5.1950247 12.7754591 11.6987456 0.9598443 10.2116857 9.2673893 3.5471783 7.7389813 10.3221181 10.3660140 10.2187675 10.2881098 4.3748447 10.5973394 13.3824432 13.4274569 10.2230781 9.2749584 -0.00241120 0.02589300 0.22731000 0.00027728 0.00027728 0.00041593 0.00444110 -0.00193990 -0.00193990 0.00000000 0.00000000 0.00000000 -0.00083160 -0.00041585 0.00277450 -0.00606510 -0.22084000 -0.01326400 -0.00449390 0.00722170 -0.00124730 0.00402430 -0.22231000 2.99330000 0.01656500 -0.00862340 -0.00862340 -0.00843850 -0.00069303 -0.00607870 -0.00241120 -0.00387790 0.00027728 0.00041593 0.00041593 0.00444110 0.00444110 -0.00193990 -0.00193990 -0.00498440 0.00013863 0.00013863 0.00000000 0.00249850 -0.00207840 -0.00207840 -0.00546390 -0.00041585 -0.00041585 0.00277450 -0.00606510 -0.22158000 -0.22158000 -0.01326400 -0.00449390 -0.00449390 -0.00087896 -0.00124730 0.00402430 -0.15669000 -0.22231000 0.76772000 0.00194180 -0.00405710 -0.00843850 -0.00069303 -0.00055444 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.65300545 11.45433122 7.76716415 9.55288885 6.82972147 10.14054695 6.23282765 -0.62504400 8.43283834 8.15620597 NA 8.16274881 4.25748590 10.08608313 9.26587051 2.54478210 10.13056863 9.37976910 12.13056857 10.35605696 9.81745298 7.65793506 10.70127587 4.74988819 8.26358987 10.16966837 5.25748968 NA 10.42605536 4.88264305 12.95068108 12.00192427 8.60846627 10.45399787 10.84041280 9.12889885 5.54477283 0.95984433 1.95980724 6.92943478 8.13473485 8.86870189 10.70436252 6.55972123 7.98280538 6.01870316 10.14096113 6.97475873 9.39652044 -1.62504400 10.88808057 4.74988819 4.66024981 9.54472126 5.97043956 6.27571295 9.98955629 9.00602362 8.76608990 NA 13.75395399 2.28172792 10.23864549 -0.04022984 8.06309680 6.25136311 7.77145117 8.81363820 13.043662 5.004205 8.438242 16.164819 10.576278 10.414794 13.463593 12.900918 8.918845 11.127227 13.541637 11.481900 9.444296 8.534718 -0.625044 7.349261 10.872199 11.054327 7.715208 8.790588 8.877678 9.466943 10.245261 9.028587 8.097654 11.695365 5.493788 -0.625044 7.248291 6.869503 11.729784 11.318277 8.487104 8.027692 13.767600 9.017801 12.393447 9.326860 10.619805 9.585518 11.784105 9.975689 10.649225 9.132236 8.166009 9.003502 8.296687 11.255004 4.281735 10.903362 10.719974 7.576970 14.159865 10.145510 10.872948 13.298638 10.201792 9.937566 3.281743 TCGA-AC-A2FE 62 1 2636 2240 breast stage iiic t3 n3a mx female 2005 NA yes infiltrating lobular carcinoma 18 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 9.7955244 9.3924928 11.0721414 9.0600650 8.3006225 9.3112022 9.8194370 9.6086089 10.6911187 11.7721025 10.8531316 10.1566985 2.5556199 13.0835518 4.0625708 9.8870003 6.6870621 8.5365033 9.1903274 12.1619684 3.4369613 13.2364803 7.1687714 9.8968861 10.1683834 5.6652364 NA 12.7196263 7.5697789 3.9801076 8.6619338 7.5436985 -0.6922218 3.8926436 9.5472829 10.5674277 9.8095215 11.3319584 10.0504149 11.1739974 4.5744709 11.1627475 14.7724535 7.6626171 9.9703528 11.3197851 10.8898264 6.0081238 5.0356063 8.6408396 10.7982846 -1.6924549 10.6408398 6.4625023 7.1625525 5.0890447 10.4007718 11.5839542 10.7793596 11.8947587 12.6112511 9.1037240 10.8390659 10.5204209 11.0684043 10.2123190 4.6114675 10.7042892 11.4978177 -1.6924549 10.4523427 9.1278633 2.5563804 6.3244920 11.1258671 10.2358326 10.1198617 9.8075303 2.6296131 9.6685315 13.3946914 13.3118171 10.0799990 9.1238682 -0.3703800 0.3512600 0.3512600 0.0000000 -0.0048636 -0.0071504 0.3589300 -0.0012017 -0.0012017 0.3597900 0.3597900 -0.0239320 0.0042089 0.0017755 -0.0017558 -0.3612100 0.3756700 0.0050426 0.0050426 -0.0081171 0.0001842 0.0149340 0.0208090 0.0208090 0.0208090 0.0312010 0.0312010 0.0312010 0.0153530 -0.3703800 -0.3703800 -0.0096352 0.0097734 -0.0071504 -0.0071504 -0.0129440 -0.0129440 -0.0012017 -0.0012017 -0.0012017 -0.0093593 -0.0093593 0.3735300 0.0073026 0.0073026 0.0073026 0.0161920 0.0017755 0.0017755 -0.0017558 -0.3612100 -0.3808500 -0.3895300 0.0050426 0.0050426 0.0050426 -0.0081171 0.0001842 0.0149340 -0.3672200 0.0208090 0.0208090 0.0012936 0.0312010 0.0312010 0.0111670 -0.3839900 0.0369490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 0.000 10.0089909 13.3298354 9.3670290 10.8449028 4.4776126 10.8055362 3.3076908 -0.1073370 8.8593925 9.6723663 NA 7.4135932 6.0423948 10.0002999 9.3824948 1.7671039 9.0491513 9.2799462 13.3783085 10.5899041 9.2505213 6.9871639 10.9796677 4.1954500 9.4719629 10.3643221 5.1405742 NA 11.0005178 3.5930908 12.1750597 11.9062022 8.5814801 9.9306513 9.0874037 9.6886865 6.6652364 0.3076617 1.1150332 2.7671251 9.2160770 9.3230994 10.0107228 6.2025020 9.5440394 7.8429600 10.3891679 5.5838079 9.3744464 -0.6922218 10.9790043 4.3076835 3.8622728 9.4738662 7.1495317 4.5171371 10.1691591 8.5826448 7.5627133 -0.6922218 13.6245669 1.1150332 10.2175775 -1.6924549 8.2130716 5.3520770 7.9818766 9.3452314 11.5788556 5.6114645 8.5567980 13.0835518 10.0841174 10.5349995 12.1619684 10.9913370 9.5030567 10.3241445 13.5457905 10.7464763 8.6408396 8.3424832 -0.6922218 7.5292712 10.5721270 11.5395056 7.1021006 8.5942421 8.3369715 8.0339025 10.3167082 8.9470253 6.8584311 10.8531316 7.0287835 3.2145756 8.6284849 7.0990427 10.4719628 10.6948939 7.4851040 9.0037827 11.6012997 7.1021006 10.3794853 9.8095215 10.5425018 9.4593353 10.9333932 10.4462762 10.4099883 8.1765068 1.1150332 9.3793411 5.9515412 10.6408398 6.9623200 10.9705752 10.4007718 7.4776093 13.3913299 9.4719629 9.9578386 12.6926030 11.2871096 9.4863493 0.6295665 TCGA-AC-A2FF NA 0 NA 2759 breast stage iib t2 n1 mx female 2006 NA yes infiltrating lobular carcinoma 3 asian not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 0 10.4885582 10.2846425 11.9337192 9.9228704 8.3137742 9.3773329 10.2380816 9.6310219 9.6805563 10.1719564 11.1077162 10.6505199 2.0658480 13.3414338 4.4314959 9.5815463 7.4921112 9.0967257 10.2116806 12.3547125 3.6133313 13.2142741 5.8166176 9.1202941 10.1140190 4.0378302 -1.6344194 11.9831715 8.9559939 4.7747976 8.6345334 7.8948372 -0.6346434 6.4098016 9.7937668 10.2507218 10.0984221 12.1793883 10.3811702 11.9246643 4.3426898 11.0033900 14.4360937 8.3339009 9.6280888 11.8788876 11.6584472 6.7141342 2.9503751 9.7240580 12.1362771 -1.6344194 11.1335911 5.9874596 7.1791876 5.4946908 10.6782896 12.0719027 10.3272181 11.9991966 12.8309094 7.8083503 11.0325183 10.7865117 11.3855186 11.7149644 5.4206879 12.2223185 12.2878053 -1.6344194 10.3773328 9.3491129 3.9898021 6.4739314 11.3747105 10.6519645 10.2965136 10.0847955 4.3426898 8.5663053 13.8169720 12.3225088 10.4189932 9.6198449 0.0081244 0.0081244 0.0107030 0.0113140 0.0171240 -0.0081624 0.0251170 0.0000000 0.0000000 0.0204830 0.0204830 0.0161460 0.0036427 0.0036427 -0.0510460 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0090984 -0.0193140 0.0217440 -0.0742770 -0.0742770 0.0070826 -0.0051227 -0.0051227 -0.0051227 0.0144700 0.0153080 0.0081244 -0.1124700 0.0113140 -0.0081624 -0.0081624 0.0251170 0.0284810 0.0000000 0.0000000 -0.0074720 0.0040243 0.0040243 0.0197830 0.0056919 -0.1767700 -0.1767700 -0.1767700 0.0036427 0.0036474 -0.0510460 -0.0510460 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0329960 -0.0013858 -0.0193140 0.0217440 -0.1654800 -0.0742770 -0.0742770 -0.1260300 -0.0051227 -0.0051227 0.0141900 0.0037465 -0.1188700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 10.4375393 12.5404104 8.2677820 10.2226102 4.9378434 9.9522465 2.2722920 2.6873295 8.6496525 10.2801656 -0.6346434 9.2040671 4.8889672 9.6929594 9.1194592 0.9503938 11.1925509 9.6426942 10.8355572 9.9997640 9.8929814 8.1085579 11.8235570 4.2448642 9.3540913 10.0204901 5.5252796 NA 10.2647637 4.3877761 13.4837395 12.5518305 9.6554255 10.4940455 9.1919552 9.2685355 4.5748584 1.9503564 0.6873295 -1.6344194 8.6239729 8.4985489 9.6720381 7.1951291 7.9969112 5.3311893 9.8751817 6.2171551 9.3569286 -1.6344194 11.7890479 2.9503751 5.9428359 9.6706819 6.4223154 7.5023982 9.8472062 9.4515429 9.3703293 -1.6344194 13.9309254 1.9503564 10.2342293 NA 8.5978276 7.6646151 8.0289647 9.2069711 13.0715250 5.4098016 9.0404815 13.3414338 10.7485710 10.1537172 12.3547125 12.0900272 9.0997691 11.0675794 12.8091273 10.5227536 9.7240580 8.3863868 -0.6346434 7.7769179 10.8360656 11.421367 6.757725 9.024511 8.359760 8.694082 10.173104 7.423398 7.356928 11.107716 5.555230 1.824849 7.244990 6.665393 12.194337 10.907955 8.656578 7.910371 12.705396 9.137721 10.957647 10.098422 10.477846 9.794814 11.139988 10.154125 10.853498 9.599026 NA 9.475029 8.807313 11.133591 7.530313 10.609506 10.678290 7.396074 14.714429 10.153309 10.686207 12.474666 10.059329 10.165093 3.722958 TCGA-AC-A2FG 79 0 NA 1853 breast stage iib t2 n1a mx female 2007 NA no infiltrating lobular carcinoma 1 white NA NA NA 2 3 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 4.161568e-07 10.282394 9.662798 11.784470 9.614969 8.506072 9.186841 10.945643 9.487964 10.697657 11.818923 9.611150 10.604922 3.337169 13.110864 3.666484 9.910143 6.967653 8.776287 10.302367 12.832774 1.958657 12.688284 8.014669 9.418729 11.177993 6.507100 NA 11.057924 8.601558 1.051790 8.318560 7.711769 1.221692 4.666484 10.025470 10.463813 10.240362 11.585103 10.163235 11.437096 5.738273 12.216523 14.521717 8.077660 10.039740 11.466722 11.096509 5.337176 1.752192 8.829028 12.465599 -1.948419 11.061951 5.017557 5.606362 4.970637 10.155061 12.051156 10.447039 12.356552 12.995661 8.112469 10.889992 11.081890 11.614612 11.317974 4.946591 12.120047 10.900005 6.211645 10.131924 9.031913 4.055829 5.005970 10.915766 10.392736 10.300590 9.716665 4.651683 9.748306 13.024977 12.387582 10.093090 9.881496 0.00402430 0.94936000 1.01610000 0.00138680 -0.00398100 -0.00041585 0.00249690 -0.00360110 -0.00360110 0.00069327 0.00069327 0.00069327 -0.00051335 -0.00051335 0.00041593 0.00041593 0.00041593 -0.00138580 -0.00138580 0.01502800 0.00527490 0.01695700 -0.00346270 -0.00346270 -0.00346270 -0.02303000 -0.00013862 -0.00013862 0.01349200 0.00402430 0.00402430 -0.00152430 0.00138680 -0.00041585 -0.00041585 0.40894000 -0.00041585 -0.00360110 -0.00360110 -0.00360110 -0.00415460 -0.00415460 0.00069327 0.00129690 0.00129690 0.00129690 0.00610900 -0.00051335 0.01824300 -0.54462000 0.00041593 -0.54239000 -0.53348000 -0.00138580 -0.00138580 -0.00138580 -0.00136550 0.00527490 0.00615690 -0.54179000 -0.00346270 -0.00346270 0.00805670 -0.02303000 -0.00013862 0.01349200 0.00124810 0.07656600 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9352181 12.2007261 5.3463932 9.7228717 2.2728891 10.6897562 0.8590949 1.5112150 8.6479627 9.2508318 -1.9484191 8.4702159 4.3916234 9.8941234 9.7737266 1.5112150 9.3999478 9.4494477 10.8777255 10.7504776 10.1003994 8.0074226 10.9450745 2.1392403 10.0153916 10.0570466 5.9765859 NA 10.0934321 4.7932404 12.7417163 12.4022288 8.0602014 10.4120714 7.3982871 9.1305909 6.5436258 1.7521920 -0.3632710 4.9586617 9.0817502 10.0233165 10.4397903 6.5595683 8.7045103 6.1655160 10.4840538 5.2996989 9.6192538 NA 13.2462990 4.0290553 5.4005004 9.6718232 5.0367055 5.7728727 9.1687666 7.9854634 8.0432947 -0.3632710 13.8837234 1.8591347 10.3252772 -0.3632710 7.8166445 5.7171088 8.1165155 9.0110505 12.1676416 4.2805926 8.8909768 13.1108639 10.6109111 10.9580999 12.8327740 12.9024482 9.4594656 10.8435464 13.2764153 10.8054076 8.8290282 9.6651021 -0.9481407 7.8671564 11.2799904 11.141885 7.475939 8.755676 8.849435 7.811661 10.083447 6.364656 7.798287 9.611150 5.890977 -0.363271 7.895694 5.986290 11.792397 10.388280 8.081060 7.777991 12.293533 6.575335 11.818933 10.240362 10.439790 9.737836 11.413580 9.498339 10.591659 8.799966 NA 8.844832 7.057397 11.061951 6.734768 11.014308 10.155061 7.330222 14.273435 10.220132 10.205008 12.579433 10.128589 10.043649 2.806654 TCGA-AC-A2FK 45 0 NA 2650 breast stage iiic t2 n3a m0 female 2006 NA yes infiltrating lobular carcinoma 3 white hispanic or latino NA NA 2 6 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.820466 10.311002 11.791442 10.341480 8.324572 9.036510 10.237453 10.049885 11.163033 13.708911 10.866203 10.829659 2.290159 13.328506 5.306448 10.752929 7.192660 10.133926 10.058332 11.543673 0.971516 11.695289 8.551816 9.264406 10.795418 5.896805 NA 9.524386 8.748089 5.430630 9.034064 8.752557 1.415705 5.306448 10.439433 10.037120 10.165548 12.489486 10.663606 12.286044 7.423173 10.006266 15.178805 7.942008 9.573026 11.989484 11.895964 6.188268 4.188266 9.757754 13.797492 NA 11.477950 5.585603 7.445426 5.517216 10.509316 12.153349 10.238515 12.954999 13.124978 7.839145 11.278316 11.207572 11.472768 11.962734 5.598901 11.870664 11.583515 1.152638 10.150953 9.367935 4.810741 4.761455 10.826484 10.512394 10.237984 10.064935 5.306448 9.616986 13.637266 13.583515 10.166107 9.834234 0.00479840 0.01776400 0.01776400 0.00132730 0.00132730 -0.00061384 -0.00308880 -0.00061384 -0.00061384 -0.00213770 -0.00213770 -0.00213770 -0.00435220 -0.00435220 0.00188230 0.00188230 0.00188230 -0.00379880 -0.00379880 0.00257620 -0.00094188 0.00118860 0.00000000 0.00000000 0.00000000 0.00841460 0.00841460 0.00841460 -0.00095537 0.00479840 0.01776400 0.00316160 0.00132730 -0.00061384 -0.00352200 -0.00308880 -0.00308880 -0.00061384 -0.00061384 -0.00061384 -0.00877380 -0.00877380 -0.00213770 0.00313150 0.00313150 0.00313150 0.00313150 -0.00435220 -0.00435220 0.00188230 0.00188230 0.00188230 0.00188230 -0.00379880 -0.00379880 -0.00379880 0.00257620 -0.00094188 0.00118860 -0.00144520 0.00000000 0.00000000 0.01092200 -0.00511750 0.00841460 -0.00095537 -0.00075242 -0.01731300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.3532979 12.0103145 7.0155912 10.5654260 3.9731337 11.1039291 1.4157046 3.8751116 8.4250409 9.9715461 1.4157046 8.2751724 4.3542758 9.3853053 9.3948659 1.1526377 9.2952620 10.3295655 10.9902723 10.0000151 9.5534897 8.2611688 10.9855344 2.9181763 10.0068894 9.9657843 7.7102995 -1.1694201 10.4076730 5.5989011 12.9072814 11.8863377 8.6202499 10.7629311 8.0595348 8.9008372 6.8968059 0.4156505 1.6380738 3.2901442 8.4100324 9.2358577 9.0168306 7.3464162 9.4979875 6.0205400 10.0637367 7.3967700 9.9015082 -1.1694201 12.1192941 4.4156776 6.2901479 9.4474213 5.2007044 6.4817688 8.9431560 7.7315831 8.6620235 1.4157046 13.8323884 1.1526377 10.7251552 NA 8.0106254 7.6251324 7.7790837 8.4287688 11.748918 3.531157 8.830716 13.328506 10.580623 10.002519 11.543673 12.253964 9.198961 11.355503 13.241896 11.475023 9.757754 7.923474 NA 7.650895 11.105386 11.223839 7.499601 9.054718 9.410975 7.205756 10.424495 7.092811 7.170566 10.866203 3.638074 5.306448 9.239046 5.688323 13.034370 10.945109 8.602206 8.218734 11.931050 7.438047 11.186004 10.165548 10.114962 9.557786 12.334294 10.352807 10.793974 9.677774 NA 9.387519 7.449102 11.477950 6.298321 11.225447 10.509316 7.663606 14.384706 9.733845 10.401046 13.312957 10.263258 10.277283 2.415678 TCGA-AC-A2FM 87 1 792 NA breast stage iib t2 n1mi m0 female 2004 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 3.467973e-07 9.800491294 9.414174865 11.183901009 9.146328100 9.191546859 7.873735083 11.439561223 9.304866470 9.000549641 13.708102442 11.015296287 10.627556409 3.173287369 14.443136186 2.877842389 8.688703157 9.352098395 8.476399511 10.441122292 13.503091560 0.418459838 13.657297557 1.877822762 9.715713743 11.565930652 4.199766559 -1.581648112 10.219307579 10.222942183 2.003386356 9.228979302 6.319274704 NA 4.372603915 10.052311141 9.966747972 9.990634273 9.593333414 9.774309376 11.064516375 1.003386356 11.656215192 13.562826981 9.947013267 9.638786137 11.521203595 11.329986947 4.793448547 6.999608841 8.812870403 9.684022708 -1.581648112 10.658602814 9.362387696 3.173287369 3.062259894 10.578909474 11.637727516 9.799950676 12.096127351 12.052878462 7.974913567 10.067663856 9.851993217 10.490540348 10.531173035 4.861349980 11.142495192 12.325110459 0.003314389 10.363485734 9.528238423 3.595133630 3.877842389 11.053445559 10.197716634 10.789912119 10.471654895 1.877822762 9.079294901 11.437303332 10.066765295 9.713028503 9.134369587 -0.655680 0.326560 0.302980 0.273630 0.257690 -0.026767 -0.021235 -0.123300 -0.123300 1.857100 1.857100 1.827800 -0.093453 -0.093453 0.388490 0.986380 -0.661420 1.876900 0.492860 0.365640 0.787750 -0.155280 -0.123690 0.857000 0.857000 3.372500 2.644100 3.656900 0.388660 -0.643580 -0.655680 -0.581060 0.273630 0.452410 -0.022332 -0.021235 -0.029922 -0.123300 -0.123300 -0.098682 0.273480 -0.127460 1.857100 0.253240 0.253240 0.253240 0.287070 -0.093453 -0.073076 0.388490 -0.651830 -0.661420 -0.661420 -1.161300 0.492860 0.582020 0.559390 0.782580 -0.158090 -0.649030 -0.123690 0.857000 0.417470 -0.623220 -0.654450 0.388660 0.254490 -0.638590 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 0.000 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 0.000 7.8128704 11.3296124 3.4184059 9.9657843 1.5883249 11.4853378 3.5476966 NA 8.7781573 7.7176154 NA 6.9142631 3.7403340 9.8336213 10.6220616 5.2128222 8.4750456 9.8171514 12.7259643 11.4047831 9.9262668 10.4250844 10.9249632 1.7403232 10.2144474 9.6621768 4.6851945 4.1732954 11.6590500 4.0331146 11.2353913 11.4610931 7.3432204 9.9667480 6.3372704 9.2281758 4.3491459 1.8778228 2.1188580 3.6663362 8.5617908 9.0784036 10.2124173 4.3726039 7.3192747 8.0961274 10.5493000 5.5782776 10.3722404 NA 10.7806256 7.6991782 5.0033684 9.5874747 5.3772487 0.7403663 8.2732762 8.9662664 4.3491459 -1.5816481 13.1875740 1.7403232 10.6110087 NA 7.5085198 5.9419702 8.2903129 9.0987672 14.221774273 6.827798705 8.841523779 14.443136186 10.190095286 10.410283858 13.503091560 13.509305805 8.292943215 11.095907151 12.131686836 11.632878632 8.812870403 8.198127245 0.003314389 8.137796541 11.866524024 11.5003904 5.8277987 8.2528787 10.6202253 9.1632416 10.8274592 5.2763887 9.6863648 11.0152963 7.5005567 2.1188580 9.3565171 7.5517298 9.2880016 10.3139830 8.9172569 10.2791068 11.8718070 3.4184059 10.4882099 9.9906343 10.8623872 9.9458848 12.2380879 9.9604723 10.6772682 8.8991980 -1.5816481 8.8603039 3.8107207 10.6586028 4.0908365 11.8140757 10.5789095 6.5833145 12.5441440 10.1373686 9.5553988 12.2050857 10.5605147 10.0358751 0.7403663 TCGA-AC-A2FO 65 0 NA 2255 breast stage iib t2 n1 mx female 2005 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 9.8804884 9.6491627 11.4810009 9.2999718 8.6365626 9.3479933 9.9618616 9.6706081 9.9551121 12.7178087 11.5511198 10.5357459 -1.3662433 13.5625437 3.3341821 9.4555216 6.5644849 8.7118985 9.4273510 12.2823300 -0.3662433 12.9535610 4.8816744 9.3591139 10.6060096 8.7973973 NA 10.3079400 8.6110277 2.4411116 8.1395595 7.2484580 NA 5.0600128 10.1084677 10.0415466 9.5755290 11.4151075 10.2224624 11.0893318 0.9556848 11.1117589 14.8103884 8.4795200 11.5374413 11.3752147 10.9733194 4.9735975 7.2521337 9.1873771 11.3859193 NA 11.1724217 9.0931793 7.1135276 4.6337451 10.4427119 11.7312861 10.1738757 11.6971428 12.7364616 7.9005342 10.8706589 10.8276550 11.1597578 10.3865465 4.9005336 11.8669180 11.2352864 7.8721522 10.2443113 9.1738757 4.1172379 6.6726672 10.3432623 10.2364466 10.3890526 9.7973974 3.5406349 7.3785818 12.9634039 12.7950371 9.5179183 9.1873771 -0.01078400 -0.01078400 0.47101000 -0.12603000 -0.12603000 0.03409500 -0.00401620 -0.05145100 -0.05145100 2.76610000 -0.32729000 0.10322000 0.56401000 0.02502500 0.01369300 0.01369300 0.01369300 0.07915900 0.19725000 -0.05185600 -0.01023200 -0.00097017 0.03171800 0.03171800 0.03171800 0.13776000 0.13776000 0.13776000 1.73390000 0.04131700 -0.01078400 0.02226400 -0.12603000 -0.03232000 0.05979400 -0.00401620 -0.00401620 -0.05145100 -0.05145100 -0.07214000 -0.06498400 -0.02342900 -0.36181000 -0.37850000 -0.00747200 -0.00747200 -0.04083900 0.02502500 0.03919500 0.01369300 0.01369300 -0.37865000 -0.37865000 0.08204300 -0.33918000 -0.33918000 -0.05185600 -0.01023200 0.00791750 -0.32331000 0.03171800 0.03171800 0.04623700 0.13776000 0.13776000 0.09304000 0.00208050 0.01112100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.228 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.228 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 0.000 10.1988498 12.3562351 7.3582617 9.8124125 5.6998375 10.7268351 5.0931798 0.2187192 8.4808051 7.9846867 NA 9.0215175 4.3886373 9.8934910 9.6045727 1.8036817 10.3505672 9.4289756 12.4745257 9.9724842 9.7525136 7.7078892 10.7468387 3.0931714 8.5179181 9.7923574 5.8625655 -1.3662433 10.7955095 3.6781395 12.3207953 11.9676019 8.6781420 10.4511311 8.9203055 9.1940806 5.1573106 1.6337567 NA 1.8036817 8.8769218 9.2158897 9.7917262 6.5995320 6.1013538 5.8911348 10.4602963 5.3752132 9.5784599 0.2187192 10.8887763 3.9191494 5.1415431 9.7704442 5.6671712 7.2299378 9.9785984 9.6052913 8.7198840 1.4411116 13.6486400 1.4411116 10.4559202 NA 7.4666377 5.8529152 8.0388894 9.1988499 13.062929 5.060013 8.592300 13.562544 10.460296 10.389053 12.282330 12.321779 9.292852 10.801479 13.473198 11.470981 9.187377 9.029282 1.633757 7.788566 11.359753 10.9688589 6.0346273 9.0011624 7.9098721 7.6561152 10.1519336 8.3079398 8.4745257 11.5511198 6.4539274 -0.3662433 5.2336619 6.6270829 9.9657843 10.7617420 8.3919709 8.4183827 11.6875040 7.8625667 12.0214703 9.5755290 10.5861250 9.6442758 11.1089745 9.5893976 10.4224661 8.5224909 NA 9.0377822 8.8529162 11.1724217 6.2036025 10.7716995 10.4427119 7.2703720 13.9315231 10.3612428 10.3986193 12.7293096 10.1548573 9.8074248 3.0931714 TCGA-AC-A2QH 58 0 NA 1005 breast stage iib t3 n0 mx female 2011 NA yes metaplastic carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 2 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 8.8532774 10.1413807 11.4582452 9.0921078 8.6785223 7.1137380 5.6756155 10.9038148 10.7444817 3.7214164 10.5431945 10.6469749 3.4218561 10.2162760 2.7214164 11.5011398 6.5027809 9.2702423 8.7129424 6.9112446 NA 7.3434727 4.9308745 9.6814224 2.8913414 4.0433445 1.3063789 8.5384039 11.1142745 3.7214164 7.5223202 10.8869556 3.0433445 4.8913463 9.1849447 10.7430945 11.2027154 9.1518730 9.1890259 9.3867564 NA 5.2760090 13.9838090 8.7635722 9.6565856 12.6816034 10.3157451 4.3652796 6.8609715 9.3471292 10.2625170 -0.2785836 10.2062433 4.8088844 6.3938452 5.5287745 9.4270528 12.1424333 10.0456011 11.6697877 12.4922908 8.8377645 10.6987004 10.6700797 10.7610250 11.0166154 4.8507044 12.0972744 8.8988399 1.3063789 10.3498660 9.8403616 5.1140796 6.0433489 12.3075565 10.1705691 11.1471609 9.2988494 2.7214164 5.0433489 13.2009481 11.6951178 9.7424004 10.6055910 0.086050 0.086050 0.098270 0.035383 0.240930 -0.036674 0.084643 0.709830 -0.051991 -0.747770 -0.629030 1.249500 -0.676210 -0.256380 -0.407160 -0.670390 -0.670390 0.792200 -0.056307 -0.331790 -0.621500 -0.064374 3.656900 -0.689880 0.230240 -0.245570 0.063509 0.063509 0.146680 0.024548 0.086050 -0.264800 0.048688 0.129180 -0.081339 0.084643 0.027778 0.709830 -0.446520 1.102400 0.581120 -0.965770 0.111550 -0.228590 -0.466770 -0.427460 -0.415990 -0.278920 -0.268530 -0.636610 -0.670390 -0.394360 -0.394360 0.792200 -0.071155 -0.056269 -0.336300 -0.621500 0.334960 -0.055634 3.163000 -0.689880 0.569520 -0.245570 0.063509 0.112720 0.658660 -0.148360 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -0.375 0.063 -0.421 -0.421 0.000 0.000 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -0.375 0.063 -0.421 -0.421 0.000 0.000 7.2760090 15.4555743 7.9975448 10.2988492 3.7214164 11.9687546 0.7214164 -0.2785836 10.3480420 10.0478500 1.7214164 8.9259917 5.1476852 10.7072624 9.0545758 3.7214164 12.0707017 10.8609718 7.3361307 9.3398059 9.3682312 7.2912757 11.8397127 2.5287713 6.6283114 9.4270528 5.3063826 NA 11.7399684 10.9217060 12.6983425 13.4768297 7.0433489 8.7794121 9.5287754 10.3129428 5.2449822 4.3063862 0.7214164 3.1808480 8.7072625 9.3231913 5.0068231 6.9502386 5.9029201 4.7214219 10.4738011 5.4493402 9.9764490 NA 11.6466040 5.9693485 6.5027809 9.3925192 7.1344561 NA 9.9050559 8.2172753 0.7214164 3.3063789 14.4186052 -0.2785836 11.0456010 NA 10.4339475 6.6756170 8.0160411 8.0343032 10.525455 7.692964 8.950239 10.216276 9.530385 10.668327 6.911245 9.400901 8.113738 11.621533 12.240811 11.221764 9.347129 9.354416 2.306379 8.168504 10.858412 11.6268075 0.7214164 8.1726315 8.9740859 7.8351624 10.7176609 4.6756184 6.8088831 10.5431945 3.3063789 6.9210923 10.5117690 8.7383122 15.0479904 9.4879493 7.9740859 9.1664353 10.2400736 3.3063789 10.3311995 11.2027154 9.6447479 9.8875836 9.9645944 10.1581320 10.0021913 8.4729645 -0.2785836 9.6056062 NA 10.2062433 10.5392036 10.8186757 9.4270528 7.7326477 14.4644666 10.0365700 9.7603394 11.3026210 11.7069067 9.7821164 0.7214164 TCGA-AC-A2QI 76 0 NA 588 breast stage iiia t3 n1a mx female 2011 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 6.242351e-07 10.0535841 9.7715340 11.5949071 9.5442387 8.1531487 9.4232769 11.1904994 9.6346597 11.0811381 11.1236654 9.5132118 10.3112172 -0.6542630 13.6196985 2.9896477 10.3068815 7.7251720 8.2720895 8.0634700 12.9079764 -0.6542630 13.9807181 6.7928775 9.4044146 10.2394743 8.3792168 NA 10.6288560 9.4484255 3.8693582 8.5107005 7.2941612 NA 4.6677219 10.0057896 9.7604788 9.3479055 11.2732012 10.1446704 11.0927277 0.9307752 10.9593529 14.9405410 7.3255042 11.3752534 10.5479175 10.9733275 4.1271545 1.1531568 8.5031404 11.1753182 -1.6542630 10.7923600 5.3344789 6.1205800 5.4647336 10.4831050 11.5903061 10.6646188 11.8970212 12.5770148 8.3415606 10.5509760 10.7061524 11.3250402 10.9694465 3.8693582 11.3415608 11.7292279 -1.6542630 10.3450891 8.8859218 3.4349484 5.8133990 10.1487139 9.8902751 10.1778925 9.4802199 3.2999919 8.3344784 12.9449510 12.4624625 9.7699600 9.9833241 -0.0177000 1.0446000 1.0446000 0.0180690 0.0180690 -0.2260400 0.0070482 0.0066886 0.0316830 -0.0080585 -0.0080585 -0.0080585 -0.2343800 -0.2343800 0.0116440 0.0116440 0.0116440 -0.5769600 0.0193280 0.0249350 0.0135970 0.0259170 -0.5816900 -0.0155000 -0.0155000 0.0051015 0.0051015 -0.0029067 0.0000000 -0.0177000 -0.0177000 -0.0327570 0.0180690 -0.2250500 -0.2285000 -0.0039529 0.0168100 -0.6289600 0.0316830 0.0316830 0.0119230 0.0072549 -0.0080585 -0.2254200 -0.2254200 -0.2254200 -0.2254200 -0.2343800 -0.2343800 0.0116440 0.0116440 -0.5778500 0.0173690 -0.5769600 0.0193280 0.0193280 0.0249350 0.0135970 0.0165310 -0.6070600 -0.5816900 -0.0155000 0.0076231 0.0051015 -0.0029067 0.0194680 0.0478010 0.0221290 -0.234 -0.234 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.030 -0.584 -0.566 0.000 0.000 0.000 0.000 0.000 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.225 -0.225 0.000 0.000 -0.234 -0.234 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.030 -0.584 -0.566 0.000 0.000 0.000 0.000 0.000 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.225 -0.225 0.000 0.000 9.2765309 14.6860958 6.3681607 10.3007169 2.7449576 11.4337536 3.0462291 -0.6542630 8.7793789 8.5269460 -0.0693005 8.0686010 3.0462291 9.8535882 9.4365677 -0.6542630 8.5281880 9.4431673 10.0208686 10.1209923 9.9143815 7.4332566 11.8423978 4.3016169 9.4132281 10.4189310 3.6677219 NA 11.0790208 2.4332533 12.0350272 11.9335711 8.4776506 9.9377834 7.9932520 9.4647346 8.9549724 1.5157125 0.9307752 2.3457938 8.6811839 9.5595054 10.3929176 3.5552517 6.8366450 6.0805042 9.8873743 6.4438254 9.5423958 0.6677559 11.5581380 3.2999919 5.1402101 9.7855259 6.6851987 4.4332533 9.8351399 8.6392655 6.1073447 3.9307563 13.2868412 1.3457938 10.3643415 NA 6.8810687 4.8849544 8.1385841 9.1148050 12.313684 4.299992 8.377840 13.619698 10.315899 10.664054 12.907976 11.398531 9.143260 9.640414 13.346058 9.936848 8.503140 8.435906 NA 7.354222 11.478454 11.5107005 6.9568187 9.0703075 7.9715027 7.7230042 10.4810733 8.1255132 7.4464556 9.5132118 7.9769707 -0.0693005 6.1271524 5.5227149 11.0559543 10.2620463 8.3202080 9.0788089 11.2151947 6.0737131 10.1429039 9.3479055 10.5390109 10.1619773 10.7902909 10.8798533 10.2330142 8.3570210 1.6677105 9.4153171 6.4543174 10.7923600 6.4172568 10.6799048 10.4831050 7.2099797 13.4836653 10.0918880 10.0186609 13.2161583 11.1842097 9.2824315 1.1531568 TCGA-AC-A2QJ 48 1 446 69 breast stage iiib t4b n0 m0 female 2011 NA yes metaplastic carcinoma 0 white hispanic or latino NA NA 2 5 NA NA 2 5 2 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 7.4655411 7.3508623 9.8594554 4.1388145 9.1282540 7.8649166 6.8318342 9.4030983 12.7995212 8.6047867 8.5561021 8.8036743 1.2319239 11.1810187 NA 14.1325054 5.8017769 6.7788157 5.2091999 3.1388145 NA 6.8466312 3.4798514 10.7864961 5.6913527 5.3193831 2.8168864 12.7491960 10.5817556 3.8168864 8.6790046 6.4018472 NA 4.1861202 8.8901329 8.1626587 8.0648117 7.0132814 7.0584702 8.0961079 1.5538520 3.4798514 14.7221457 3.3312179 10.7287754 8.8865575 7.5080459 3.5538520 NA 6.6497735 9.0505039 NA 10.0663926 5.9461671 6.7476210 6.6581858 8.1358032 11.0871794 10.4285237 11.2632782 10.7451557 10.2056189 9.6391893 9.2206061 8.6434327 9.7691400 -0.7680761 10.1259814 7.8972574 -0.7680761 10.9427280 8.8539735 1.5538520 4.1861202 8.6913530 8.1832061 10.4118306 7.9254085 0.8168864 8.4559231 12.0065027 11.9254085 9.2912660 9.9166703 0.314020 0.264200 0.236590 0.298380 0.290340 0.152030 0.281840 -0.016292 -0.016292 -0.173860 -0.173860 1.789200 -0.272600 -0.272600 -0.054825 -0.054825 -0.054825 -0.102370 -0.121200 -0.218370 -0.109780 -0.160080 -0.384810 0.164000 0.164000 -0.060748 -0.060748 -0.060748 0.275050 0.396450 0.314020 -0.030813 0.363130 0.173320 0.145950 0.281690 0.252610 -0.016292 -0.016292 -0.016292 0.298510 0.283270 -0.173860 0.862150 -1.223700 -0.433820 -0.415970 -0.272600 -0.272600 -0.054825 -0.054825 -0.067847 -0.055271 -0.102370 -0.121200 -0.102890 -0.218370 -0.102770 -0.182570 0.026654 -0.396790 0.164000 -0.176890 -0.060748 -0.060748 0.275050 0.262470 0.356590 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.120 -0.120 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 0.000 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.120 -0.120 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 0.000 8.8612783 16.3209789 3.1388145 11.4374094 3.8168864 10.1678233 1.2319239 1.5538520 10.4340454 9.4762855 NA 6.8539732 7.8685460 9.9984505 9.2459420 3.9323636 8.6434327 8.0457029 7.4364925 11.3502138 9.0094236 5.2091999 12.5527221 2.9323636 6.4413756 11.3637785 1.5538520 NA 11.6460783 0.8168864 13.5269012 13.9435348 9.7237746 8.3508627 10.1130355 11.1331656 3.5538520 3.2319239 -0.7680761 0.2319239 9.1582176 12.2990197 4.8757801 8.0165565 7.6377435 9.4438099 9.3778536 6.1022865 9.7662244 2.2319239 10.3127391 3.2319239 3.2319239 8.0537272 7.7422508 -0.7680761 11.1890236 11.8105301 5.5173229 12.2686103 13.8098814 0.2319239 11.8587713 NA 7.6581865 NA 7.3612043 9.1492937 11.119961 7.831834 8.089903 11.181019 9.184663 10.917108 3.138814 6.809350 9.042493 9.184663 12.511967 12.629329 6.649774 9.921046 5.276314 6.517325 7.376580 10.2556759 3.8168864 8.3791266 6.8685460 7.2708410 7.8479556 7.8539732 6.7633027 8.5561021 5.4018455 1.8168864 8.6954458 8.3975570 10.2248599 9.8963689 7.3612043 11.4471512 3.9868114 4.0392788 9.7136604 8.0648117 10.6172448 10.6226280 7.4118304 10.6655070 10.1183802 5.3816675 NA 10.6681646 4.4413772 10.0663926 7.2319220 9.8594554 8.1358032 7.5583511 14.4591238 11.0548907 9.8972575 11.6631580 11.3682719 8.3033840 0.2319239 TCGA-AC-A3BB 46 0 NA 987 breast stage iiia t3 n2a mx female 2011 NA yes infiltrating lobular carcinoma 5 black or african american not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 5.548757e-07 9.1365939 9.0227393 11.3035263 8.1687062 8.5367100 9.5714419 10.4123291 9.5444232 10.9946068 11.7691613 10.7056973 10.3460723 1.9933121 12.8103102 2.7818213 10.6618893 7.4646323 8.2481406 8.7187702 12.4158693 0.1188913 13.2731482 6.2133745 9.8924253 10.1113238 6.8914471 -1.4659384 12.6595563 8.7000582 3.4407795 8.6567230 6.4287136 -1.4659384 4.3667838 9.6286325 9.6120458 9.3217976 11.7206283 9.0476226 10.5728140 5.7138030 10.5289554 14.6576931 7.3234610 10.1541148 10.7921666 10.1586905 5.4165391 6.8376759 8.4362701 12.1885310 NA 10.7933440 5.4764109 6.4467839 5.3667838 9.7711050 11.6053573 10.7720011 12.4954351 12.3993383 8.3234286 10.3000098 10.0222423 10.8027294 10.3246508 3.1777584 11.1976754 10.5918867 0.1188913 10.6407850 8.7603071 3.7054250 5.7237196 10.8172728 9.5638724 9.9278217 8.9747642 3.1777584 9.5486129 14.1872439 12.8708896 9.9612079 9.6187034 -0.2123100 0.4164700 0.4077700 0.0169850 0.0200630 -0.1914900 0.0058309 -0.2131600 -0.3233300 -0.0041546 -0.0041546 -0.0041546 0.0093098 0.0066653 0.0072217 0.0072217 0.0058053 0.0088378 0.0101460 -0.1957500 0.0079175 -0.0056757 -0.2223100 -0.2223100 -0.2223100 0.0087528 0.0087528 0.0087528 -0.0022168 -0.2123100 -0.2123100 -0.0044312 0.0169850 -0.2051000 -0.1914900 0.0058309 0.0058309 -0.2131600 -0.3930100 -0.2313400 0.0077783 0.0077783 -0.0041546 0.0227250 0.0227250 0.0227250 0.0126550 0.0066653 0.0036576 0.0072217 0.0072217 0.0058053 0.0058053 0.0088378 0.0025198 0.0066653 -0.1957500 0.0079175 -0.0056757 -0.4407000 -0.2223100 -0.2223100 -0.4221100 0.0087528 0.0087528 -0.0022168 0.0291840 -0.4292000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.2098520 14.2602728 6.4764092 10.7584996 5.7627129 10.4826272 5.4527569 NA 9.1495246 9.9262124 -0.4661377 8.5338950 5.9933256 9.7883332 9.7883332 1.5339121 9.5817005 8.8204528 10.5762384 11.2728317 9.4243341 7.1885315 11.7850815 3.9933302 8.7212472 10.2871117 7.2686047 NA 10.9427554 2.7038095 12.9357078 12.0482392 8.8692854 9.5999842 8.6187034 9.8152454 5.1037494 NA -1.4659384 2.1188580 9.0446591 9.9422248 10.0980445 6.5111755 9.0889634 8.1338080 9.6689630 4.7237169 9.2584089 0.1188913 11.3337837 3.2887867 4.1486088 9.6235375 7.4479511 6.7912827 10.2373661 8.4851796 8.9758015 0.8558303 14.1023856 2.5338872 10.5566095 -1.4659384 8.5714421 6.2618147 7.2133755 8.8692854 11.9659018 4.7038205 8.3730987 12.8103102 10.2063203 10.6676794 12.4158693 11.5056182 9.2854390 10.2472815 13.0520563 11.7119373 8.4362701 8.9401001 0.8558303 6.6734462 10.7569917 11.4751260 6.9851065 8.8204528 8.6721668 7.3667847 10.3669352 8.5810190 8.9304996 10.7056973 8.2820876 4.4165358 4.9432837 6.7894424 10.1028011 10.7378547 7.7794475 9.2273820 9.5183134 7.7912827 11.3507287 9.3217976 10.8493276 10.2032229 10.3727050 10.1929989 10.4738414 8.2635157 0.8558303 10.0726078 8.3037328 10.7933440 7.2652137 10.9283577 9.7711050 6.5168882 14.1122382 10.0247459 10.5079510 12.6196164 11.3809523 9.0106411 1.1188248 TCGA-AC-A3EH 79 1 197 17 breast stage iiic t3 n3 m0 female 2011 NA no infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 3 2 NA NA 1 2 3 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.467973e-07 8.7124878 9.1143936 12.1248117 7.9078040 8.2168045 8.2499331 11.0174414 9.0999303 11.7129334 8.9963656 10.9855882 10.3147755 5.7978508 14.1194160 1.2742915 9.0779599 7.8549525 7.2998253 8.2950714 12.7635646 1.2742915 14.2180083 4.2218230 9.3380702 11.1415688 5.3495776 0.0518593 12.5415775 9.5092784 1.7888527 8.4906893 6.0962914 -0.5330336 2.4669403 10.2071375 10.1318267 8.9015632 11.2168045 10.2007978 11.0253558 2.2742915 10.9240594 15.5225988 6.1828293 11.2654048 10.1260391 11.2402804 4.8932020 -1.5332424 8.0310847 11.1293809 -1.5332424 8.8624691 4.3738291 3.6763915 5.2482957 10.5434167 11.5638149 10.8837326 11.4797342 12.5104751 8.2318068 9.8511792 9.6020030 10.9784407 9.6715062 4.9426693 11.9107852 11.8138643 -1.5332424 10.8062283 9.1534355 3.5607516 4.8067829 10.5783968 9.8294269 9.9036466 9.2058717 1.0519289 10.2147085 12.7269725 12.3568193 10.6659939 9.7752741 0.66309000 1.16990000 1.17600000 0.01335900 -0.00774820 -0.41784000 -0.00180140 0.00000000 0.00000000 0.81318000 0.81318000 0.78910000 0.42587000 -0.41410000 0.00999360 0.01153900 0.01153900 0.00235810 -0.01519100 0.00013863 -0.40285000 0.04032600 0.03171800 0.03171800 0.03171800 0.03622900 0.03622900 0.03622900 0.02651400 -1.27930000 -0.41036000 0.07282700 0.02693500 -0.41784000 -0.41784000 -0.00180140 -0.01074500 0.00000000 0.00000000 0.00000000 0.06651500 -0.00294190 0.81318000 0.02104300 0.02104300 0.02104300 0.07455200 -0.41410000 0.02890300 0.00527490 0.01153900 -0.00029200 -0.00029200 0.00235810 -0.00609040 -0.82806000 0.00013863 -0.40285000 0.03199900 -0.81942000 -0.81589000 0.03171800 -0.82529000 0.03622900 0.03622900 0.02651400 0.02174400 0.05879500 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 0.000 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 0.000 8.4641144 14.6308599 7.8847878 10.2835188 0.9651748 11.4771135 NA 0.0518593 8.6763884 9.4704531 -1.5332424 7.6242822 4.1948593 10.2458336 9.6109560 2.8592540 6.5490838 8.9222624 13.1164719 11.3693102 9.4417727 6.5003575 10.5440845 1.6368682 7.3061392 10.5228953 2.8592540 NA 11.2556534 2.0518941 12.0572882 11.0675449 7.8178746 10.1529978 6.7430598 9.6993561 4.1673740 0.4669664 -0.5330336 10.8239372 8.9904971 10.0287004 9.9109146 3.8244827 9.0565020 8.4384787 9.8233870 5.5113289 9.4534882 -1.5332424 9.7154557 2.9905011 4.3495776 9.5344031 7.2106587 NA 9.8250368 6.9904966 4.1393631 2.9263600 13.4428278 0.4669664 10.4993252 NA 8.0500179 4.8244878 7.5357132 9.3526314 12.220093 5.208400 8.059392 14.119416 10.062659 10.872343 12.763565 11.817322 9.485135 10.335372 12.933904 10.118435 8.031085 9.053775 1.051929 6.893200 11.270663 11.845365 6.331121 8.253205 8.796731 7.982635 10.688649 6.775274 5.421132 10.985588 7.364781 1.274291 6.349578 6.458797 11.143333 10.453488 8.208402 9.908323 10.984112 3.636857 9.865492 8.901563 10.437401 10.671506 10.840616 9.535713 10.635294 9.175157 1.926379 9.949415 2.714861 8.862469 6.538397 11.284718 10.543417 6.355679 12.997829 8.638112 10.322582 13.298638 11.858447 9.225991 1.788853 TCGA-AC-A3HN 87 0 NA 496 breast stage iib t2 n1a mx female 2011 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.733986e-07 10.5868081 10.1343999 11.4066722 9.8110346 8.3253540 8.7430541 10.8438601 9.7211641 10.6113027 9.8992187 11.1243935 10.3362689 5.6064363 13.2422384 3.4326120 10.3788362 6.9939189 8.5749015 9.7107736 12.9253888 0.8824474 13.6642677 7.7171075 9.7374747 9.9542558 7.1438342 -0.3398928 12.1002366 9.1598638 3.6296480 9.3347986 7.1465178 -1.9246727 5.6219493 9.9075499 10.1611917 10.2062693 11.2003075 10.0873308 11.4979087 0.6600159 9.6842342 14.7749532 8.8478895 9.8127254 11.7908030 11.1022703 5.5749008 5.3324430 9.0771671 12.3969131 -1.9246727 10.9967105 5.6296451 6.9909344 5.8232475 10.3394981 11.5191644 10.6351495 12.0538553 12.7915534 8.3662260 10.7089588 10.6589585 11.0785733 11.3724017 4.7615566 11.1418174 9.1015789 NA 10.4746004 8.9142592 3.9099651 5.8029764 10.5439340 10.0226924 10.2314546 9.5185170 3.4673708 9.9890668 13.8481174 12.2868677 10.0343329 9.7184608 -0.00758830 0.40744000 0.40333000 -0.00912860 -0.00912860 -0.01523000 0.43277000 -0.00995650 -0.00995650 -0.00799570 -0.00799570 -0.00470790 0.00708260 0.00708260 0.00000000 0.56632000 -0.42236000 0.00041593 0.00041593 -0.00401620 0.00263570 0.01572700 0.02232000 0.01998000 0.01998000 0.03552400 0.03073200 0.03073200 0.02862200 0.03764100 -0.00758830 -0.00387790 -0.00912860 0.03298600 -0.01523000 0.32527000 0.36166000 -0.00995650 -0.00995650 -0.00995650 0.02048300 -0.00979960 -0.00172860 0.00305220 0.00305220 0.00305220 0.00305220 0.00708260 0.00708260 0.00000000 -0.40639000 -0.42236000 -0.42236000 0.00041593 0.00041593 0.00041593 -0.00567570 0.00263570 0.01572700 -0.42484000 0.03608800 0.01998000 -0.00337760 0.03552400 0.03073200 0.01082400 0.00791750 -0.39419000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.68238579 14.33564427 6.07505550 10.96075184 4.50115249 11.17325207 3.98194396 2.16253232 8.75277501 8.92914476 -0.33989283 8.23473745 4.88240829 9.87190632 9.65907845 2.77549308 9.94965267 9.33597491 11.15487354 10.19334769 9.65850499 7.71891161 11.79946272 3.64399468 8.68515736 10.16979300 4.50131812 NA 11.04588038 2.46738383 12.27150391 12.28504182 8.40597237 9.80891818 8.80552560 9.32535381 5.06374021 1.66001587 1.39698146 4.32298088 8.62098515 9.28937456 9.47005402 6.64491041 8.41398116 6.87595572 10.04336228 6.56289569 9.48709599 0.07505336 12.50164783 5.50968318 5.47593442 9.11249945 6.33008328 6.86621811 9.94503482 8.79273174 8.96455949 0.88244742 13.35662333 0.07505336 10.39529195 NA 8.42820228 5.87595449 7.52420397 8.96455949 13.3150757 5.6219493 8.3947276 13.2422384 10.5499528 10.4939622 12.9253888 11.9543515 8.6494599 10.6842342 13.1354559 10.0701160 9.0771671 8.9039851 0.6600159 7.2990569 10.5401117 11.457544 7.708051 8.693441 9.078573 8.412677 10.405112 8.037952 7.990935 11.124394 7.146518 4.075053 5.754535 7.418596 11.427927 10.606924 7.648703 9.168473 11.837749 7.536535 11.469108 10.206269 10.505769 9.491325 11.343451 10.935754 10.760023 8.642061 NA 9.658735 7.582850 10.996710 6.888837 10.712738 10.339498 7.227341 13.718151 10.124904 10.005054 12.783062 10.695275 9.929145 3.629648 TCGA-AC-A3OD 68 0 NA 451 breast stage iib t2 n1mi mx female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 6 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6.242351e-07 6.935946e-08 10.8374434 9.9227243 11.2891546 9.8073214 8.5080832 9.1331738 9.6716527 9.6509813 9.5417725 10.8219031 11.5600480 10.5039156 3.2329523 12.9754200 3.9262841 9.7038461 7.3365717 8.6216080 9.2415568 12.8463666 -0.3215675 12.8620734 8.1275090 9.3371656 10.8890318 5.3926059 NA 10.9553688 9.6989932 3.2930761 8.5363416 7.5822421 -2.3219281 4.3648595 10.2661380 10.3020134 9.3289634 10.8040968 10.1601598 11.2726851 5.7605084 12.4188264 14.5241200 8.7068883 9.8978315 11.0866902 10.8815555 4.6895899 4.1540971 9.9170638 12.1270576 NA 10.8353915 5.8179123 7.7035001 6.5144111 10.4486114 12.2382752 10.5606214 11.7686383 13.0267429 9.1213040 10.9227243 10.6183785 11.4242448 10.8941968 5.3857209 12.0554354 11.5873159 -1.3215675 10.1095969 8.9131778 4.7276646 6.5363420 9.2223590 11.0002886 10.3260437 9.9056755 2.8878177 10.2343874 13.2866731 12.3548685 9.8018352 9.6923810 -0.3869400 0.3595300 1.0314000 -0.4081100 0.7372000 -0.0053992 0.0027745 0.0000000 -0.0099565 0.0133530 0.0133530 0.0024969 0.0108420 0.0108420 0.0066653 1.7892000 1.1091000 -0.0018014 -0.0018014 0.3588800 0.0087528 -0.3853700 -0.3900700 0.0127950 0.0127950 0.6965200 0.0127950 0.0127950 0.0220240 -0.3735800 -0.3869400 -0.0030475 -0.3959700 0.0068044 -0.0120240 0.0027745 -0.4090400 0.0000000 -0.0099565 -0.4032900 0.0026357 0.0000000 0.0133530 0.0133530 0.0133530 0.0047676 0.0185230 0.0108420 0.0108420 0.0104240 0.0066653 -0.3985300 -0.4011100 -0.0018014 -0.0018014 -0.0018014 0.0020805 -0.0227440 -0.3853700 -0.3839200 -0.3900700 0.0127950 0.0114000 -0.4227600 0.0127950 0.4051100 0.0019418 0.0260920 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.279 0.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.279 0.097 9.8872045 12.0431107 5.1782047 10.2479788 3.6090930 10.9327987 4.2930688 1.3787890 8.6677548 8.8526621 2.1377986 8.1815901 4.9821403 10.2919197 10.0588215 4.5363389 9.3476885 9.8737326 10.2396484 8.6902865 10.3371811 8.1520663 10.7937293 3.8482874 9.6871393 10.0257050 4.3788029 -2.3219281 10.6423403 5.4062816 12.5788500 11.9403085 7.7816482 10.1972595 10.2041259 9.3622323 5.6383635 3.5112530 0.6783424 7.3595985 9.4564376 9.5336182 10.8769590 6.0137503 8.8974322 5.5112498 10.0959493 6.3149847 9.6245358 -0.7367252 11.9533209 3.0706813 6.4432320 9.6338578 5.7726484 5.9866999 9.4621773 9.6860887 7.4113754 2.0706641 13.7676454 1.4857359 10.2560254 NA 7.7241202 5.5238505 7.9775684 8.7724383 14.807145 5.717279 8.180198 12.975420 10.843902 10.946902 12.846367 9.978141 10.100720 11.055435 12.883352 11.084300 9.917064 9.519925 NA 7.300412 10.867876 11.383777 8.694472 8.058821 8.971257 8.528547 10.296124 8.417297 6.681175 11.560048 7.148003 6.554877 8.078173 7.237891 10.768307 10.939574 7.364861 8.631102 12.360367 7.594239 11.810753 9.328963 10.430323 10.343696 10.687839 10.099899 10.825565 8.267075 2.963770 9.645551 6.956809 10.835392 5.935747 11.403514 10.448611 7.231202 13.728209 9.599830 9.947487 12.619683 10.363109 10.050681 2.678365 TCGA-AC-A3QP 79 0 NA 675 breast stage iib t2 n1mi mx female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 9.735561 8.573536 10.687231 6.340007 9.015098 8.727130 9.698886 9.465396 11.242581 9.092876 11.274309 9.787636 3.135650 13.291731 2.419431 11.250296 6.166675 8.191402 9.921562 11.751797 1.612069 13.950126 5.906708 10.436635 9.771957 5.380269 NA 10.461714 9.103939 2.312520 8.255942 6.751638 -1.387978 4.393444 8.600771 9.755469 9.376128 10.952493 9.112928 10.108441 4.860014 11.187389 14.358469 5.431626 9.902681 9.886464 9.882965 4.444978 4.226794 7.918148 10.860607 NA 10.503490 5.038353 5.951935 5.419441 10.042016 11.640856 10.997140 12.235053 11.966886 8.085792 10.596148 10.237338 10.169071 9.963025 4.312527 11.083253 9.580753 1.934026 10.404876 9.132705 3.007142 5.444975 10.764054 9.540604 9.810531 9.301210 3.419445 8.189515 13.129133 13.006549 8.997948 9.752277 3.1910e-03 3.1910e-03 3.1910e-03 -5.3992e-03 -5.3992e-03 -6.6432e-03 4.3021e-03 -3.1859e-03 -3.1859e-03 7.9374e-01 7.9374e-01 7.9762e-01 0.0000e+00 0.0000e+00 -2.6522e-05 -2.6522e-05 -2.6522e-05 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 3.6076e-03 1.2237e-02 1.2237e-02 1.2237e-02 1.8943e-02 1.8943e-02 1.8943e-02 2.4969e-03 3.1910e-03 3.1910e-03 -3.3243e-03 -5.3992e-03 -6.6432e-03 -6.6432e-03 7.5998e-04 7.5998e-04 -3.1859e-03 -3.1859e-03 -8.9224e-03 1.2934e-02 -2.8901e-03 -4.5768e-01 5.8309e-03 5.8309e-03 5.8309e-03 5.8309e-03 0.0000e+00 0.0000e+00 1.4749e-02 -2.6522e-05 3.6076e-03 3.6076e-03 1.3863e-04 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 3.6076e-03 -4.4102e-01 1.2237e-02 1.2237e-02 6.3871e-03 1.8943e-02 1.8943e-02 2.4969e-03 6.7438e-03 -3.8649e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0225373 13.6280673 7.5778706 10.4928175 1.3191555 10.1400517 2.5189883 0.9340258 9.3228926 9.1666750 -1.3879778 7.1159113 2.8600093 10.3644667 9.4909034 0.9340258 7.8858818 8.4162170 9.1079410 11.6415458 9.3656287 5.9608152 10.8694739 4.9519374 9.4433932 9.9032567 7.3090534 NA 10.6801926 2.6995516 14.2569845 12.4195416 8.0571009 10.1805173 8.8940162 10.1124300 2.1970476 -1.3879778 NA 3.8600093 9.7895056 10.9868539 10.2725277 5.0383528 7.5774666 8.9317581 10.8194055 5.5546011 9.8160457 0.1971105 10.1198807 0.1971105 4.2845141 9.7232870 7.6423391 5.2267975 9.8172685 7.9474762 8.9641294 0.9340258 14.7431593 0.6121166 10.6822070 -0.3879778 8.0320463 5.8215393 7.7179944 9.0182912 12.309124 3.934016 8.649633 13.291731 10.246897 10.562277 11.751797 10.917008 9.229195 9.916437 12.718731 12.086679 7.918148 8.488603 1.419431 7.694235 9.545777 10.7941700 5.6889021 8.9215625 8.7140617 7.4322654 10.0915026 8.2138571 7.8741810 11.2743094 7.6889014 3.0044115 7.3802706 5.4464945 10.3472190 10.1468753 8.5738108 10.1454158 6.3736378 6.4886034 10.7060549 9.3761282 10.7857632 10.2482575 10.3543955 9.6399920 10.0150980 6.9340140 NA 9.7874235 7.2304720 10.5034901 6.0715181 10.8483993 10.0420158 6.7310271 15.2498713 10.7713267 10.6700778 12.5125756 11.2180285 9.3220316 0.1971105 TCGA-AC-A3QQ 53 0 NA 734 breast stage ia t1c n0 (i-) mx female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 4 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.433109263 7.686395473 9.898772929 4.640256507 9.535556500 8.054389424 8.566253489 8.819764926 10.984727402 11.179412767 11.831658690 9.123102275 4.125684160 17.512259306 1.581351247 9.967941376 7.675878018 7.267860667 8.829287641 12.408702973 NA 14.051807311 5.535555333 10.640803917 9.481220623 2.455833513 -1.003466630 12.402602758 9.574770424 -0.003611254 8.123102275 5.455830226 NA 3.519956991 8.158788910 9.264354863 8.166322787 8.670590043 8.196069946 9.453778678 3.166329818 10.661733659 14.016639847 5.290649254 10.804557554 8.838748228 9.759610101 6.455828583 NA 6.938912659 9.123102275 NA 10.177549973 4.125684160 4.244323872 5.281798382 8.843455044 11.579950678 11.036344940 11.193614433 11.172882623 9.388715209 10.237785131 10.176306814 9.258492543 9.234802585 -1.003466630 10.711072567 10.735334483 NA 9.972245763 7.764582359 4.852388432 2.455833513 10.274847171 8.571936902 9.837962158 7.982239527 0.581399457 10.070539198 12.355186306 11.961280092 9.441412515 10.020844827 1.75440000 1.23130000 1.57070000 -0.00193990 -0.00193990 -0.00360110 -0.00055444 0.02104300 0.02104300 0.00388540 0.00388540 0.00388540 0.00000000 0.00000000 0.16047000 3.06270000 -0.71042000 -0.00319040 0.00374650 -0.02438800 -0.02763700 0.00110930 -0.71060000 3.65690000 0.15920000 -0.01684100 -0.01684100 -0.01684100 0.47495000 -0.71114000 -0.00622860 0.00791750 -0.00193990 -0.00360110 -0.00360110 -0.00055444 -0.00055444 0.02104300 0.02104300 0.01883500 -0.01230000 -0.00478720 0.00388540 -0.04373700 -0.04373700 -0.04373700 -0.04373700 0.00000000 0.00000000 0.17950000 -0.03135900 -0.71042000 -0.71042000 -0.00319040 0.00374650 0.00374650 -0.02397700 -0.02763700 0.00110930 -0.62998000 -0.71060000 0.15920000 0.01824300 0.62424000 -0.01684100 0.47495000 0.00180300 0.02300500 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.009 -0.675 -0.551 0.159 0.000 0.000 0.000 0.000 0.000 0.560 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.009 -0.675 -0.551 0.159 0.000 0.000 0.000 0.000 0.000 0.560 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.767887152 13.133468950 6.848147179 9.899526411 4.125684160 12.094594383 4.422663592 0.996388746 9.525828303 7.554818283 NA 6.007626092 4.388713056 9.952773857 9.339583480 4.973675557 6.156269186 8.115338663 9.507161935 11.786949887 9.605290233 5.535555333 9.846584672 1.996388746 9.207069000 10.234802465 4.488251485 -1.003466630 11.169450224 0.996388746 12.859131971 11.795476986 7.166322787 9.602802958 8.032571450 10.487749812 3.318331304 1.581351247 NA 9.014597991 9.309280798 11.663065618 9.742072084 3.244323872 6.402560178 9.707204155 9.741231518 6.253785097 9.562451752 NA 10.177549973 0.581399457 4.205853839 9.339916570 7.933448120 4.388713056 8.938912365 7.835601377 8.732799664 1.803764330 14.034802392 -0.003611254 10.678953508 NA 7.353949570 5.353951334 7.295605489 9.302459347 14.784689 6.205852 7.845021 17.512259 10.027754 11.475167 12.408703 10.547145 8.356147 9.636643 12.826913 10.754204 6.938913 10.539913 4.205854 7.002023 9.713217 10.3643585 5.3183241 8.8197649 8.6221067 8.6546092 8.8485528 7.8851411 8.9665037 11.8316587 8.9751082 1.9963887 9.8980189 6.9366815 8.7260185 9.8141809 7.9793915 11.0931129 4.2058538 5.2631847 11.3176946 8.1663228 10.6366427 10.7765274 9.3126792 9.2336077 10.2672771 4.3183241 0.5813995 8.4322972 6.8356020 10.1775500 5.5199601 10.3972772 8.8434550 7.7311072 14.1955716 10.0442033 9.0838606 11.9249161 11.8853312 8.6293931 0.5813995 TCGA-AC-A3TM 50 0 NA 762 breast stage iiia t3 n1mi m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 8.6567927 7.8465949 10.7226155 5.0702047 8.4287094 8.3283585 9.4410118 8.8003324 11.1125314 9.9744953 10.9922886 9.5198572 2.0306892 13.2923814 1.6681191 10.6896830 8.1983753 9.7023175 7.7403367 11.9463916 2.1826923 13.8115369 6.5260892 10.8892670 9.8515662 7.3283590 0.8607642 10.5387898 9.6081069 1.4457267 7.8061971 5.2530703 NA 3.3843123 8.0105001 9.3705281 9.6231353 10.3803894 8.3566082 9.1098667 6.1086813 11.2815029 13.6987260 5.0645423 10.1832447 9.4662327 8.4919300 5.0105024 6.1086813 6.7187342 10.2812398 -1.1392358 10.8719804 3.9051487 4.5046077 4.2183085 8.6355404 11.8733777 10.9999848 12.2385060 11.3513534 9.7743906 10.2546799 10.1257822 9.7241651 9.6106226 1.1826923 11.2072669 10.8441031 NA 10.1110517 7.9187452 3.3843123 1.6681191 11.4518080 9.1380406 9.4315576 8.0530462 3.6156399 10.8723299 12.8680433 12.1759027 9.9315449 9.7494964 0.00000000 0.95291000 0.98067000 0.00449060 -0.00161340 0.00074275 -0.01583000 0.00351830 -0.45197000 0.01061300 0.01061300 0.01061300 0.00324060 0.00324060 -0.00057188 -0.00057188 -0.00057188 0.00880240 0.00880240 0.01927300 0.00088144 0.00574150 -0.44109000 0.04519100 0.86997000 0.00240760 0.00240760 0.00240760 0.00365720 0.02053300 0.00000000 0.00588050 0.00449060 0.00074275 -0.00350780 -0.01583000 -0.01583000 0.00351830 -0.45197000 -0.45197000 -0.00479680 0.00088144 0.01061300 -0.00189050 -0.00189050 -0.00189050 0.00316360 0.00324060 0.00324060 0.00046541 -0.00057188 -0.00057188 -0.00057188 0.00880240 0.00880240 -0.01122300 -0.00488630 0.00088144 0.00574150 -0.63004000 -0.01651700 -0.00022778 0.00560250 0.00240760 0.00240760 0.00727140 -0.00880340 -0.40148000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.972 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.972 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6952241 13.0137510 9.3354732 9.6999569 1.4457267 10.9842280 2.1826923 -0.1392358 9.9065129 7.8691817 -0.1392358 6.6089467 4.4754611 10.0895719 9.4991892 5.8149503 6.7555713 7.8178554 10.7276457 11.5043839 9.1109804 6.0206244 9.6648842 -0.2594610 9.0967673 10.0567405 4.0702090 -0.1392358 10.5050601 3.5611917 13.6029079 12.5382526 7.0105001 8.6256248 7.7249394 10.6584147 2.8607443 0.8607642 -1.1392358 7.3364869 10.1104593 11.6559811 9.3047328 2.5612039 9.2952563 9.5629258 10.3339515 4.7187342 9.2172053 -1.1392358 10.1204965 -0.1392358 3.3201814 9.5296648 7.9035891 3.1086750 9.6264537 7.7187342 8.3586051 3.1086750 14.2849195 0.4457267 10.8979569 -0.1392358 8.4134223 4.1826844 7.5954626 9.2194043 13.294032 7.060426 8.072641 13.292381 10.186059 11.450404 11.946392 11.141234 9.154547 9.689683 13.015571 11.210587 6.718734 10.710549 4.287022 8.153075 8.967970 10.500094 5.518963 8.922799 8.761620 8.077499 9.327972 7.122848 8.084755 10.992289 8.374481 1.668119 8.526089 7.281134 9.892110 9.733428 7.571559 11.218305 4.718734 5.253070 12.133078 9.623135 10.587397 10.623135 9.203939 9.775886 10.207267 6.270144 NA 9.920375 5.883120 10.871980 5.430610 11.007322 8.635540 7.706243 14.703153 10.862513 9.916713 12.039262 11.555111 9.068988 1.860764 TCGA-AC-A3TN 75 0 NA 456 breast stage iib t3 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 5.895554e-07 9.3194917 7.9835261 11.1249102 5.8976640 8.9412343 8.9100877 10.8383342 8.9324035 11.0564574 8.4318394 11.4733352 9.9412341 3.9067078 13.7978864 2.4916735 10.0063210 5.4674262 7.7396004 7.8953947 12.9048070 NA 14.4425688 6.4239865 9.7755821 10.0841298 6.0846277 NA 10.8509831 9.0786376 0.5847701 7.8255732 4.3921388 NA 2.7547165 8.9078371 9.1744334 10.2077492 10.8051605 9.0214936 10.0052687 2.4916735 11.1577192 13.9385148 6.2463473 10.3554460 9.3194917 9.9268568 3.5847822 6.5904074 7.1659823 10.5088524 NA 10.4972973 6.3595686 3.9770967 3.3921388 9.0431889 11.6833078 10.7792312 12.5015947 11.9240755 9.1451149 10.2155044 10.1263629 10.3583335 10.0655723 2.2852246 11.2474506 8.3092958 -1.4150375 10.1772393 8.1258789 2.5528689 3.0442192 9.8568287 8.9587348 9.8643928 8.1902617 2.7547165 10.3459178 11.6998258 12.2931117 9.7281654 9.7578347 0.00485790 0.73019000 0.73019000 -0.00498440 -0.00498440 -0.00802440 -0.00166290 -0.00387790 -0.00387790 -0.76877000 -0.76877000 0.00055459 0.01400100 0.01400100 0.00819590 0.00819590 0.00819590 0.00124810 0.00124810 -0.00277070 0.00797120 0.02960600 -0.76072000 0.02160300 0.01765300 0.03481800 0.03481800 0.02022900 0.03495900 0.00485790 0.00485790 -0.00512270 -0.00498440 -0.00802440 -0.00802440 -0.00166290 -0.00166290 -0.00387790 -0.00387790 -0.00387790 0.00000000 0.00000000 -0.78572000 0.00900410 0.01894300 0.01894300 0.01894300 0.01400100 0.01400100 0.00819590 0.00819590 0.00819590 0.00819590 0.00124810 0.00124810 0.00124810 -0.00277070 0.00797120 0.02010000 -0.78827000 -0.76072000 0.02160300 0.02525000 0.03481800 0.02022900 0.03495900 0.01307400 0.04854600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 0.000 7.5677759 12.9625350 4.3661403 9.9401333 1.5847701 11.2006417 1.9066982 NA 9.4879108 6.6722457 NA 5.6828148 3.4916735 9.8261695 9.6434504 1.5847701 6.8184019 7.4612994 11.4101385 11.6483458 9.7452209 6.4551464 10.4349691 2.0442192 8.5960093 10.2642623 7.6828141 -0.4152299 10.3945503 2.7547165 13.0816360 12.3108939 7.2286388 9.9467259 7.4145051 9.9733376 1.5847701 2.0442192 0.5847701 4.1083404 10.0660771 11.5158890 10.5095947 3.7942391 9.5625201 8.5791356 9.7838410 5.4427644 9.7646913 NA 11.2277364 1.3921525 4.3921388 9.5801536 6.8729555 -0.4152299 9.7140652 7.8908437 6.2782692 2.6722443 14.0727792 0.5847701 10.7798467 -0.4152299 8.0047424 5.3396683 7.1584289 8.7807694 13.7931690 5.2286379 8.5462320 13.7978864 10.1541632 10.8315228 12.9048070 12.4275254 8.9630770 9.6959178 12.4665653 9.4589951 7.1659823 10.0068470 0.5847701 8.0068467 9.7856808 10.7392838 5.4302719 8.7783075 8.6209558 7.6209558 9.8162194 6.2358343 7.7597078 11.4733352 8.2747802 1.5847701 7.0442138 5.8602552 8.3245627 9.6078435 8.9078371 9.9957635 5.7646912 2.7547165 11.8394492 10.2077492 10.5634926 10.3092960 10.5099657 8.7721344 10.1355290 6.5620623 -0.4152299 10.0571379 2.5847942 10.4972973 5.9684871 11.1137246 9.0431889 6.4239865 14.2112042 10.6785298 10.4578417 12.4615869 10.8922676 9.5243613 0.1697968 TCGA-AC-A3W5 65 0 NA 504 breast stage iia t2 n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 4 1 NA NA 2 6 1 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.155855e-06 8.323135e-07 9.4590742 9.7594247 11.2306968 8.2595465 8.1962082 9.1941836 10.4386944 9.8223935 11.7971013 12.2506843 10.0170855 10.0732504 1.3034008 17.5130786 3.0403840 10.9583470 5.5764314 8.3220764 6.6010933 11.9648938 -1.2813863 11.1512530 7.3183629 9.8521832 10.1675988 6.0582992 -1.2813863 10.9890374 10.4480709 3.5258058 9.7716973 7.2653450 NA 5.5258058 9.2182961 10.4395493 9.0313332 9.8795820 9.4429640 11.3505365 5.3034118 8.7587399 15.1748045 7.5325196 10.5096049 10.3178981 10.2542115 4.7845406 5.1107683 8.2730389 10.9339831 -0.2815617 10.7226706 5.6132664 7.3478065 6.1107683 9.6871169 11.4582307 10.7149236 11.8204258 12.1246551 7.7324707 9.9887455 9.7673865 10.6609646 10.8012644 4.7628431 11.0335997 9.4049506 -1.2813863 10.5245970 8.6447461 2.9724353 6.0403774 9.3748749 9.5552895 9.8522345 8.8164823 2.8059115 8.6283431 12.9084291 12.2072944 10.0015385 9.7345620 0.2656200 0.8307900 0.8437700 -0.1715700 -0.0715980 0.1345600 -0.0093966 0.3265800 -0.2908200 -0.7952700 -0.4787000 0.3976200 -0.0058357 0.0263820 -0.4302800 0.2579400 0.2579400 0.2697100 0.2264300 0.1793600 -0.0344870 -0.1209500 -0.4395000 3.6569000 -0.4330000 0.1628100 0.1628100 0.0691040 0.4397000 -0.0803230 0.2656200 -0.7279100 -0.1715700 0.1910200 0.7351200 -0.0093966 -0.0093966 0.3307700 -0.2908200 -0.2908200 0.9786900 0.2649900 -0.4839600 0.3382100 0.3382100 -0.0887640 -0.1643200 0.0263820 0.0263820 -0.4302800 0.2579400 -0.7541700 -0.7541700 0.2697100 -0.4230800 -0.4230800 -0.4415600 -0.1236100 -0.0651710 -0.4606600 -0.4395000 -0.4648200 -0.7351200 0.1628100 0.0749350 -0.4578900 -0.0705370 0.3202900 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.433 -0.433 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.286 0.338 0.000 0.000 0.000 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.433 -0.433 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.286 0.338 0.000 0.000 0.000 9.9998006 14.9720945 5.4049508 10.9995108 4.6726460 11.8629490 3.8883731 1.7184383 9.2778272 9.0869565 NA 8.1283290 5.3623051 10.1473337 9.4940603 3.2420079 8.8783213 8.9781933 9.8237038 10.4518892 9.8438765 7.2022659 11.8838282 4.2246577 8.2556683 10.4870479 2.3034008 -0.2815617 11.0018279 2.4188916 11.7821822 12.6954616 8.8256670 9.7750878 9.0869565 9.8308896 6.2576085 3.2420079 NA 4.7845406 9.3891064 10.8451546 9.5795369 4.5258058 10.4644521 8.8858684 9.8295858 5.9082749 8.8412781 NA 10.4438164 4.4733388 4.3623086 9.6942982 5.7492285 6.1021542 9.9033254 8.5449984 9.5079837 2.6253406 13.5466362 1.5258183 10.6279682 NA 7.8833569 5.9181214 8.0222308 8.0176581 11.721531 7.190125 8.771018 17.513079 10.022351 11.211555 11.964894 10.317898 9.070273 10.148380 12.894078 8.738041 8.273039 8.310907 3.040384 6.660964 11.183761 11.487875 4.966380 9.006163 8.751873 7.947269 10.133738 8.108619 7.918123 10.017086 8.013071 1.718438 9.777795 7.531269 12.963557 10.782856 8.040378 9.335918 9.024512 7.322077 11.372742 9.031333 10.227730 10.206792 10.488701 11.109694 10.312308 7.506353 7.666818 9.748358 7.190125 10.722671 8.226245 10.912831 9.687117 7.604146 13.587032 9.995156 9.761477 12.117060 11.979811 9.391759 2.418892 TCGA-AC-A3W6 90 0 NA 602 breast stage iiia t3 n1 mx female 2012 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.771866e-06 1.11759e-06 9.2739995 9.2651935 11.4394739 7.9259876 7.8831442 9.2213515 10.6497321 9.6579783 11.3414129 8.3619789 10.8217439 10.1719534 1.5509499 11.9869159 2.0655378 10.2434390 6.2274080 8.3765882 9.0162230 12.3305502 1.5509499 13.7018287 6.9962588 9.8685028 9.8495016 3.7435904 -0.2563558 10.8882387 9.6594726 3.4440309 9.6376530 7.1572206 NA 4.9724124 9.6728515 9.9135182 9.0519321 11.0202992 9.3029701 10.7855944 2.5509499 10.1677595 15.2624614 8.7979941 11.3400135 10.0456608 9.6054554 5.3729486 2.0655378 8.2414450 11.9909273 0.7435581 10.7104591 5.8310564 6.4984807 5.3583013 9.4808405 11.7108194 10.5302711 12.2621234 12.3924001 8.4230730 10.0817723 10.0009810 10.6220273 10.9266081 3.9135213 11.3362838 11.3831599 -0.2563558 10.5237228 8.6231762 3.7884247 5.5380104 10.6368946 9.1164583 9.9141441 8.7194412 5.2513896 8.8586369 13.1495988 12.1212104 9.6794949 10.2060954 0.14533000 0.14533000 0.14533000 -0.00193990 -0.00193990 -0.00719580 0.05736800 0.00610900 -0.00968060 0.00041593 0.00041593 0.00041593 -0.00110870 -0.00041585 0.00610900 0.00610900 0.00610900 0.00000000 0.00000000 -0.33653000 0.00152550 0.00868930 -0.31473000 -0.31473000 -0.32310000 0.01447000 0.01447000 0.01447000 0.01670500 0.14533000 0.14533000 -0.00083160 -0.00193990 -0.00719580 -0.00719580 0.05736800 0.05736800 0.00610900 -0.00968060 -0.00968060 0.05530000 0.05736800 0.00041593 0.00208050 0.00208050 0.00208050 0.00208050 -0.00041585 -0.37067000 0.00610900 0.00610900 -0.00219420 0.00847430 0.00000000 0.00000000 -0.32391000 -0.33653000 -0.00151810 0.00277450 -0.30404000 -0.31473000 -0.31473000 -0.32426000 0.01447000 0.01447000 0.01670500 0.00277450 0.02904400 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.315 -0.315 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.315 -0.315 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.2518831 14.2111350 4.9135166 10.6170373 3.6504889 11.0191357 3.7879861 NA 9.0496547 9.3683886 0.3286067 8.4150281 4.2671537 9.6323364 9.7735705 2.5509499 9.8586367 9.1740458 10.2563336 9.7329877 9.6007578 7.2233733 11.8295635 3.6015777 7.1055367 10.6853744 5.7435931 -0.2563558 11.0243639 3.5509499 12.8092617 12.3767019 8.7534217 9.4509522 9.3601419 9.4318436 4.6977905 2.2030132 1.3285493 3.2030288 8.5200262 10.2875916 10.4151343 5.6977905 8.6480019 8.2981822 9.6231764 4.3285565 9.0208805 -1.2563558 11.7713264 3.1359124 5.4984807 9.3554570 6.4740287 4.2981817 10.2764361 9.4892676 6.6564821 0.7435581 13.7782202 2.9135118 10.8264075 NA 7.5669605 6.9034649 7.7093775 8.3982294 12.750501 6.074510 8.245431 11.986916 9.848192 10.292415 12.330550 11.803951 8.817735 9.892705 12.835524 10.029573 8.241445 8.174046 1.328549 6.601575 10.968499 11.4802065 6.4300929 8.9085001 8.3210221 7.3360504 10.6588638 8.7108195 9.2817822 10.8217439 7.3172407 4.6504831 5.9819987 7.5839305 10.3063126 10.7896940 7.1823854 9.6684057 9.1667092 6.4984807 11.1076457 9.0519321 10.6042922 10.0387882 10.8264075 11.2474189 10.4331544 8.1677593 0.3286067 10.1297575 5.9819987 10.7104591 6.9135178 11.6412495 9.4808405 6.6802315 14.1391942 10.2157763 10.2880746 12.3285556 11.3869984 9.4448995 2.6504889 TCGA-AC-A3W7 66 0 NA 471 breast stage iib t2 n1a mx female 2012 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 7.282743e-07 9.5623728 9.5028356 12.2205447 9.3913753 7.5537698 9.2141897 11.8785714 9.2796484 10.5554947 10.8129163 10.8445310 10.2561553 2.7208694 13.0719697 2.5093665 10.0619438 6.5188357 8.3621108 10.6096232 12.9813718 3.5093791 13.9776247 8.9276722 9.4726370 10.8534381 5.0296340 NA 8.9747146 9.0337630 3.9618918 8.3581633 7.2642634 NA 4.2387257 9.9021452 9.4150004 9.1914464 12.0675951 10.0012289 11.5544888 3.3058392 11.4265123 14.7057191 9.5182997 11.0893844 10.8165167 10.3758414 5.1683372 4.7532997 8.3515608 11.7859900 0.2614706 10.5497377 4.6190021 5.2614481 4.6877158 10.0217525 11.8759281 10.5543451 12.4693015 12.7196627 8.0784321 9.8998842 10.0403016 11.1387324 11.4810706 4.7850117 11.4488004 10.8417069 -0.7386497 10.3699727 8.5946038 5.0298990 4.0943374 10.4304337 9.9125000 9.9102552 9.0517968 3.8160364 10.5514672 13.3594804 12.2389071 10.4986583 10.0092217 0.0296060 0.5693400 0.5729100 0.0036076 0.0036076 -0.0095426 0.0000000 -0.0008316 -0.0008316 0.0260920 0.0260920 -0.0055375 0.0291840 0.0241960 0.0186180 0.0186180 0.0186180 -0.5742400 0.0794470 -0.0024938 0.0283410 0.0467000 -0.5383500 -0.5383500 -0.5383500 0.0891270 0.0891270 0.0891270 0.0672320 0.0296060 0.0296060 -0.0050315 0.0036076 -0.0095426 -0.0095426 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0095883 0.0114000 0.0260920 0.0186190 0.0186190 0.0186190 0.0461330 0.0241960 0.0241960 0.0471260 0.0186180 0.0186180 0.0186180 -0.5742400 -0.5558700 -0.5558700 -0.0024938 0.0283410 0.0467000 -0.5539700 -0.5383500 -0.5383500 -0.5628600 0.0891270 0.0891270 0.0387710 0.0332670 -0.5402900 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1022261 14.2691545 5.7208804 10.6115588 3.3266812 11.5258909 2.5093665 0.5834228 8.8435904 8.4463236 1.0688084 7.9841193 3.4313689 9.4282391 10.2369381 2.3489122 9.1256346 9.3395991 12.4548967 9.9610207 9.9737087 7.8482880 11.0511857 3.5468451 9.5194253 9.9692389 4.5833747 NA 10.3248434 4.0163359 12.4695302 12.2161899 7.4830354 9.8793748 7.6012984 9.2656687 5.1562672 0.5834228 -0.1536070 4.7371838 8.5957215 10.0058617 10.2490676 5.1562672 9.0155006 8.2430154 9.4938693 5.2039646 9.0911712 NA 12.0458787 3.7533050 4.5093728 9.3773698 6.2362075 2.0688084 10.0329378 7.3329111 4.9479466 -0.1536070 13.9822270 0.8463930 10.3745393 -1.7384090 7.9688073 5.8313047 7.5141136 8.4818265 12.990587 5.283814 8.300367 13.071970 10.600185 10.331569 12.981372 12.697835 9.239637 9.768252 13.002599 9.872934 8.351561 9.072020 1.431356 6.901694 11.186261 11.4856008 5.5093760 9.0155006 8.7422384 7.1100709 10.6985943 7.2444419 9.2893543 10.8445310 7.9071070 5.3803901 5.8761584 7.0621865 11.0530182 11.0415779 7.3829819 9.3119771 10.9976388 4.9338747 11.2439001 9.1914464 10.3640803 10.2765148 11.5569303 10.8782268 10.6703087 8.8798338 NA 10.1877258 4.9618872 10.5497377 7.1773278 11.2418164 10.0217525 7.4035558 14.0059663 10.1690901 10.3449277 12.3153742 11.7536771 10.0667891 0.2614706 TCGA-AC-A3YI 74 0 NA 707 breast stage iiic t1c n3a mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 10.202892730 9.284543051 11.665088710 8.930330783 8.113755187 8.539115762 10.111811074 10.197403715 11.429713452 11.693961070 10.275888552 10.241927514 3.240146387 13.644730345 1.314174451 11.673679508 6.713320522 8.867202741 9.569650199 11.127610067 2.314145441 12.524333817 5.992222333 9.425243393 9.780124041 5.384540295 NA 10.381842058 8.820358011 5.014587391 9.256663956 9.065024002 0.992188336 4.899112777 9.644170122 10.062342339 10.075700818 11.124078392 9.688319557 10.965560072 8.277623564 9.890822852 15.283608005 8.565262813 10.194957488 10.747108911 10.840844393 5.162145571 4.384540295 8.505948871 11.937482368 0.577150837 10.561602420 7.216222999 6.259008785 5.182044687 9.479056512 11.733056262 10.306804725 12.932626810 12.720354530 7.986574765 10.708183442 10.520763434 10.628392862 11.353891144 4.747108072 11.027364193 12.030283068 -0.007811664 10.624762289 9.501996370 4.742022384 5.100746428 10.815190497 9.860272251 11.026676556 9.639679860 3.636079338 9.748777694 13.480877527 13.375183137 9.059655682 9.491070623 7.6663e-02 7.6663e-02 7.6663e-02 7.8595e-04 -8.0237e-03 -1.8473e-03 -4.5978e-05 -4.6154e-03 -4.6154e-03 1.1058e+00 9.2750e-01 3.6311e-01 5.0860e-04 5.0860e-04 9.2653e-05 -6.9738e-02 -6.9738e-02 -4.6947e-03 -4.6947e-03 -3.7854e-03 9.2653e-05 1.8957e-03 1.4795e-03 1.4795e-03 1.4795e-03 9.2653e-05 9.2653e-05 9.2653e-05 3.1450e-03 7.6663e-02 7.6663e-02 1.8616e-02 7.8595e-04 -1.8473e-03 -2.8964e-03 -4.5978e-05 -4.5978e-05 -4.6154e-03 -4.6154e-03 -4.6154e-03 -3.0934e-03 -3.0934e-03 -1.7491e-01 -1.4318e-03 -1.4318e-03 -1.4318e-03 2.7850e-02 5.0860e-04 5.0860e-04 9.2653e-05 9.2653e-05 -6.9738e-02 -6.9738e-02 -4.6947e-03 -4.6947e-03 1.0657e-02 -4.6154e-03 9.2653e-05 1.8957e-03 -1.6374e-01 1.4795e-03 1.4795e-03 2.3121e-03 9.2653e-05 9.2653e-05 3.1450e-03 -4.0004e-03 -1.4411e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 0.000 7.709897835 14.253618560 8.637879727 11.050551488 2.329927262 10.764123517 3.162145571 1.314174451 8.978063460 9.249609361 -0.007811664 8.134328255 3.162145571 10.111811074 10.029768413 2.451646328 9.869505629 9.724388848 12.954756010 9.375925634 9.651022083 7.177096577 11.889877860 3.314145441 8.646857478 10.838103471 6.554464529 NA 10.950049006 3.692661528 12.854761949 12.199083185 8.965201318 9.922958816 8.595847868 9.676093359 4.720141633 0.992188336 -0.007811664 2.451646328 8.673459963 9.693527903 8.848647037 6.240148295 8.944598749 7.131772608 10.389361272 5.546811136 9.424763403 -0.007811664 11.055953526 4.201673064 6.058310001 9.203988080 5.920117002 5.367259224 10.529925163 7.455745582 7.868738614 2.992224599 13.826000997 0.992188336 10.933635926 0.992188336 8.451652921 5.664647808 7.767008513 8.431013212 12.610967 5.500015 7.884005 13.644730 9.932535 10.198015 11.127610 11.650210 8.897608 10.449602 13.439434 12.365086 8.505949 8.459827 -1.007812 7.447549 10.517742 11.841626536 5.546811136 8.595847868 8.716735452 6.806003050 10.157605890 6.812400673 7.216222999 10.275888552 6.090254300 4.240146387 6.928859430 6.208093863 12.120054580 10.165273837 8.044789713 9.841626614 10.808405083 6.569650579 11.934570976 10.075700818 10.661106465 9.603246150 11.510874615 11.050551488 10.460336298 8.069037241 3.240146387 9.708886614 7.507921465 10.561602420 7.925912214 12.396963858 9.479056512 7.225840782 14.404195774 9.976639872 9.941318655 13.383666429 10.844360779 9.949323503 -0.007811664 TCGA-AC-A3YJ 66 0 NA 754 breast stage iia t2 n0 (i-) mx female 2012 NA no other specify 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.121176e-07 9.3445223 8.4864747 10.8260624 6.3252155 8.9680337 8.8393559 9.7399821 9.7261451 10.0276466 13.0313746 11.2306647 10.1941757 0.9414820 12.8565494 2.1114320 8.5227110 7.2589231 7.5302253 9.2532587 12.9692436 3.1114320 13.8952066 2.4009477 10.3128132 9.9776839 8.1846845 NA 10.2996120 11.8325345 1.7488476 7.9044064 5.7359256 NA 2.6419390 9.4660520 9.0937952 10.1852793 9.5708668 8.9457309 10.1007510 NA 10.4537570 14.2235128 7.9264413 10.1655120 9.8226242 9.8737251 3.6419506 8.5283502 7.5075647 9.9386898 0.5264695 10.4318599 3.0289757 5.2452903 3.7488691 10.0102886 12.1162800 10.4728917 10.9108968 11.9211142 10.2211209 10.2401457 10.0409239 10.2217011 9.8355701 3.9415101 10.9439738 11.1790191 NA 10.8367069 8.2059530 2.2691828 4.5853652 10.7407919 9.3698706 10.3735302 8.3078324 2.4009477 5.5113668 11.6941001 11.1319524 10.0096167 9.0539498 -0.00816240 0.69260000 1.45430000 -0.00415460 -0.00705760 -0.00013862 0.00360760 -0.00387000 0.00000000 0.00958830 0.00958830 0.00958830 0.00152550 0.00152550 0.00287290 0.00287290 0.00287290 -0.00152430 -0.00152430 0.00110930 0.00208050 -0.00678130 0.00263570 -0.00013862 -0.00013862 0.00124810 0.00124810 0.00124810 0.00152550 -0.00816240 -0.00816240 -0.00041585 -0.00415460 -0.00277070 -0.00013862 0.00360760 -0.00229280 -0.00387000 0.00000000 0.00000000 0.00152550 0.00152550 0.00958830 -0.00180140 -0.00180140 -0.00180140 -0.00180140 0.00152550 0.00152550 -0.00058695 0.00287290 0.00287290 0.00287290 -0.00152430 -0.00152430 -0.00152430 0.00110930 0.00208050 -0.00678130 0.00499690 0.00263570 -0.00013862 0.00235810 0.00124810 0.00124810 0.00152550 0.01642500 -0.00429290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1751298 11.3604171 1.2634551 9.3423898 NA 11.1861715 NA NA 9.1436342 7.8898775 NA 4.7228704 0.9414820 10.1387271 9.4650723 0.5264695 5.9415101 8.8241533 11.4142011 10.8917017 9.9918011 5.9072945 10.7795324 3.2634401 9.8551477 10.0656317 2.8483976 2.9415195 10.7363323 3.3338244 13.3111758 12.5269424 6.8056962 9.7030616 7.9386898 9.8279690 1.2634551 3.2634401 NA 5.7743997 9.5562202 11.9441495 9.4333634 1.2634551 9.5772375 8.9721774 10.3402540 3.2634401 9.8438854 NA 11.9467840 1.5264695 9.3295275 9.5557600 6.4635816 1.2634551 9.4542508 7.8927948 7.6997335 NA 14.2991311 0.9414820 11.2916208 NA 7.6349976 5.1509617 8.4293502 10.0355880 12.44897175 5.31655126 8.57268734 12.85654939 9.95831868 11.88914728 12.96924358 12.32656381 8.47049172 9.34984006 12.42759111 11.10106638 7.50756474 12.45276882 -0.05844292 7.28580630 9.93868982 10.351962 5.007599 8.394781 8.128863 6.866323 9.838932 7.947135 6.299061 11.230665 6.350902 NA 10.444839 6.449543 7.599722 10.092527 8.376201 10.217053 7.217635 3.400948 11.242632 10.185279 10.860001 10.164909 10.215306 8.849903 10.128244 6.409116 NA 10.039918 3.263440 10.431860 4.556221 11.068215 10.010289 6.376139 14.747607 10.652747 10.103272 11.783468 10.136883 8.888417 1.263455 TCGA-AC-A4ZE 63 0 NA 890 breast stage iib t3 n0 m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 1 4 2 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.28102623 9.53558760 11.29112862 9.53166003 8.57492157 9.18843653 10.60824743 9.30806548 10.69567374 12.01197452 12.16062600 10.31188713 5.01268040 13.27956325 3.51518258 8.94144411 6.76310744 9.06434129 10.22821215 13.34797643 0.01264018 14.37398327 6.09305305 9.35527246 11.09527174 7.72692452 -1.57217932 8.97171512 9.62677550 2.59765035 7.62738870 5.15563591 NA 4.42771343 9.62124200 10.47654401 8.90648628 10.90066125 9.19341719 11.59497796 12.56342591 11.64446249 14.03588480 7.38057448 10.35993137 10.82378621 10.85319484 5.75863364 NA 9.02390651 12.18061991 0.01264018 11.01009390 3.85398567 4.71311840 3.88714505 10.03504691 12.14828155 10.07742194 11.14539304 12.97207741 7.57492119 10.94169088 10.94239618 11.51650487 10.69157264 5.07157391 11.41870691 10.72463288 -0.57217932 10.24029513 8.86858584 4.78738022 4.85398068 9.08682065 9.61135204 10.82859604 9.80221277 2.95127073 9.75245976 12.41515831 12.35067263 10.33685966 9.71888730 0.00810110 0.82902000 0.88912000 -0.00314180 -0.00314180 0.00907570 0.00365190 0.00392660 -0.91813000 0.00117370 0.00117370 0.00000000 -0.45251000 0.01214200 0.00073752 3.65690000 3.65690000 -0.00078739 -0.00078739 -0.44993000 0.01982700 0.00935420 0.02470800 0.02470800 0.02470800 -0.02543900 -0.02543900 -0.02543900 0.00156980 -0.94832000 0.00261650 -0.00701350 -0.00314180 0.00907570 0.00350960 0.00365190 0.00365190 0.01339700 -0.91813000 -0.91813000 0.00032152 0.00032152 0.04476100 -0.00161870 -0.00161870 -0.00161870 -0.00161870 0.01186300 0.01186300 0.00073752 -0.03581400 -0.91970000 -0.91970000 -0.00078739 -0.00078739 -0.00078739 -0.44563000 -0.00293870 0.00935420 -0.97338000 -0.92634000 0.02470800 0.00601430 -0.02543900 -0.02543900 0.00156980 0.03599200 0.02852600 -0.453 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 -0.453 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 9.43474393 11.03689540 1.88713530 9.75302215 4.02852495 11.13959867 1.42771343 NA 8.72463288 6.43334174 NA 7.81288901 5.98995869 9.80709502 10.02437232 4.74964689 8.14539317 9.16242633 11.67875514 10.24229905 9.77058015 8.57746357 11.60917952 3.12816140 9.65352655 10.35364187 4.74964689 NA 10.49178567 3.07157391 12.11520167 10.98230549 7.54145908 9.27399043 7.76310678 9.43754527 4.61753946 -0.57217932 0.01264018 9.50252713 8.88612332 11.40213122 9.90192957 6.40499676 8.18742186 7.44730726 9.73206802 6.61259136 9.87634919 NA 12.03389049 5.50453141 5.16918343 9.12404969 6.83812609 1.59765035 9.58569512 9.54341062 5.63716970 NA 13.83392164 1.42771343 10.09925772 -1.57217932 5.31035830 5.96687570 7.57492119 9.43824481 15.254218 5.169183 8.527064 13.279563 9.979905 10.555389 13.347976 13.143518 10.347198 10.928036 12.319216 11.914175 9.023907 8.525749 2.887155 7.228617 10.956903 11.02832651 7.57492119 8.27006681 9.81303978 8.80058157 10.61638582 6.52574943 8.27006681 12.16062600 5.92756228 -0.57217932 5.85398068 7.98017443 9.12207449 10.36913109 7.16242658 9.40571204 12.88849247 4.28569813 12.54441393 8.90648628 10.55989499 10.08637444 10.46766383 10.52443182 10.77672138 8.28102635 0.74966298 8.80202806 3.01267593 11.01009390 2.82003596 10.97990537 10.03504691 8.08972641 14.23911642 9.33159841 9.63899659 12.38509079 11.38608811 10.51551092 0.01264018 TCGA-AC-A5EH 76 0 NA 511 breast stage iib t2 n1mi mx female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 2 2 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.155855e-06 1.179111e-06 9.1388127 9.0861500 11.2295621 8.5722023 7.9628064 9.3739640 10.4093909 9.7901217 11.6369609 13.5574242 11.4588400 10.1170138 4.0074198 12.7496621 2.4224483 11.6268380 5.9604190 7.7664096 11.4592626 11.8044970 -1.2778838 13.5141446 4.9508323 9.5286776 9.8557996 6.2455774 0.3069621 11.9369414 11.6672762 1.0439744 9.0740588 7.2842578 NA 4.2138683 8.5675051 10.8081515 7.3293452 11.5815501 9.6153168 10.9888018 NA 9.5533225 15.3359773 7.8909628 9.8673106 10.6334072 9.9351195 4.5293712 7.1896210 8.5643656 10.3102614 1.3069621 10.7698208 5.3513704 6.1649592 5.1143337 10.4107027 11.5539162 10.3577333 12.0390038 12.6249556 8.0707435 10.5962282 9.6411690 10.8429011 10.5461784 4.4224550 12.0550308 10.4384061 -1.2778838 10.5973807 8.7513024 2.8983438 5.8200462 10.8341289 9.3404007 10.2387002 8.4752320 3.6762110 9.1409220 13.1282867 11.9648916 9.0085729 9.2118632 -0.2856000 0.0455070 0.0831980 0.0489720 0.0218840 -0.2572100 0.0427320 -0.6325600 -0.2566000 -0.5964300 -0.5964300 -0.2435000 -0.0033243 0.0216570 -0.6085400 0.0434400 0.0434400 0.0077368 0.0549450 0.0365120 0.0209030 0.0072217 -0.0131270 -0.6368900 0.0298880 -0.0372180 -0.0372180 -0.0372180 0.7057000 -0.2856000 -0.2856000 -0.2909600 0.0567980 -0.1725900 -0.2572100 0.0536640 0.0536640 -0.6325600 -0.6334900 -0.3055200 0.0454240 0.0606510 -0.5964300 -0.6077700 -1.2258000 0.0396190 -0.6720500 0.0216570 0.0216570 -1.0534000 0.0434400 0.0431570 0.0431570 0.0549450 0.0537740 0.0537740 0.0383470 0.0209030 0.0072217 -0.6161400 -1.2494000 -0.6368900 -0.6239800 -0.0372180 -0.0372180 0.6997600 0.0224440 -0.3105100 0.000 0.000 -0.609 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.616 -0.645 0.000 -0.288 -0.288 0.000 0.000 -0.286 0.000 0.706 0.706 0.000 -0.305 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.633 -0.262 0.000 0.000 -0.591 -0.244 -0.510 0.000 -0.204 -0.204 0.000 0.000 -0.609 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.616 -0.645 0.000 -0.288 -0.288 0.000 0.000 -0.286 0.000 0.706 0.706 0.000 -0.305 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.633 -0.262 0.000 0.000 -0.591 -0.244 -0.510 0.000 -0.204 -0.204 9.0439435 14.5484893 5.4499344 10.1592472 3.0439394 10.4806549 0.7220288 NA 9.2698738 8.6921210 NA 7.3367252 4.3658745 10.0927027 9.7346399 2.0439394 6.6527532 9.3293456 10.0751621 11.1073385 10.1814623 6.8869220 10.9329909 3.2455717 3.8512993 10.3753082 2.1814524 NA 9.9124572 1.7220288 12.9304782 12.5540152 7.3404011 10.0685289 8.5148056 10.3408595 4.5033742 1.5293712 0.3069621 9.9870443 9.4207199 10.0757135 10.2033102 2.1814524 7.9447138 9.2158708 9.6175905 5.0795658 9.8730319 NA 10.7564703 4.5799947 3.1814524 9.7150103 7.5090038 -0.2780587 9.4482334 7.4567248 1.0439744 6.0707435 13.8725559 1.3069621 10.5827142 NA 8.2937677 3.5800007 7.4499360 9.2436158 12.509102 7.152467 8.569073 12.749662 9.212866 11.107338 11.804497 10.196228 8.987630 10.018931 12.773309 10.024083 8.564366 10.082314 -1.277884 7.189621 11.120492 11.7645297 6.4702082 8.7092793 9.2048232 7.5799962 9.8653985 7.5862010 3.8919441 11.4588400 7.5033750 3.1814524 5.1977475 7.8233870 10.2761244 9.9858712 9.0082496 9.4224550 8.4085157 2.7220069 10.6104503 7.3293452 10.2655304 10.1972420 11.2048232 9.9161565 11.0674205 8.6586532 10.0506902 10.4302973 2.5293712 10.7698208 8.9155406 10.3404007 10.4107027 6.1732254 13.7424310 10.8051622 11.0959679 12.2801968 11.2604467 8.3837933 0.7220288 TCGA-AC-A5EI 88 0 NA 442 breast stage ib t1c n1mi mx female 2012 NA no other specify 1 white not hispanic or latino NA NA 2 5 NA NA NA NA 2 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.27363000 0.27363000 0.20886000 -0.00304750 1.03770000 -0.01363100 1.01680000 -0.01395300 -0.01395300 0.46810000 0.46810000 0.46810000 -0.00415460 -0.00415460 -0.01298900 -0.01298900 -0.01298900 0.00555290 0.00000000 -0.02562000 0.51228000 -0.00318590 -0.01285100 -0.01285100 -0.01285100 0.89267000 0.89267000 0.89267000 1.04510000 -0.00719580 0.27363000 0.00819590 -0.00163720 -0.01363100 -0.01174900 1.01680000 1.00990000 -0.01395300 -0.01395300 -0.02096100 1.59480000 1.59480000 -0.05320600 -0.00857660 -1.06770000 -0.01038200 -0.01381500 -0.00415460 -0.00415460 -0.00705760 -0.01298900 -0.01298900 -0.01298900 0.00555290 0.00000000 0.00000000 -0.00571210 0.51176000 0.00610900 -0.15067000 -0.03262500 -0.01285100 -0.00013862 0.89267000 0.89267000 -0.00318590 -0.00097017 -0.01340200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.235 0.235 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.235 0.235 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 0.211 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AC-A5XS 74 0 NA 588 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 4 NA NA 1 4 3 2 3 2 0 0 0 0 7 0 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.172175e-05 4.092208e-06 9.4349895 8.8216710 9.1118506 6.5012226 9.0410978 9.6115693 9.0296022 9.5751313 10.1027370 9.8201889 10.6850558 10.0575426 3.7012496 12.6126398 3.1418251 9.9155669 5.6218145 8.1559880 10.0359999 12.1171405 -0.1060942 13.0937953 8.2404069 10.4477382 9.7909821 8.1082118 0.4788165 12.3379967 10.1641883 NA 8.8495427 6.3451036 NA 4.1033466 10.1571621 9.1700174 9.8305309 10.7707935 9.6768911 10.0442748 7.4900823 11.2843306 13.8872736 4.2510904 10.4100854 9.6479453 9.9925831 4.3533233 6.1700172 7.7917385 12.4871673 NA 10.7491507 6.2602158 5.9051198 3.3533233 10.2634902 11.7839672 10.5773262 11.0947915 12.2702897 9.4993724 10.6008206 10.3932406 10.8116379 9.1465582 1.7012385 11.1054771 9.6939840 -1.1062495 9.8480893 8.7932499 3.1087921 6.2426216 11.2368009 9.3887486 9.8238910 9.2937050 2.2158339 8.2135650 12.6722781 13.0986169 9.2292834 10.1063893 0.00388540 0.60799000 0.92645000 0.01544700 0.02300500 -0.45018000 0.01223700 0.61498000 -0.36068000 0.01712400 0.01712400 0.01712400 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.00263220 -0.47986000 0.00000000 -0.04644800 -0.00221680 -0.01972600 -0.03789800 -0.03789800 -0.03789800 -0.03871400 -0.03871400 -0.03871400 0.43361000 -0.49830000 0.00388540 -0.02562600 -0.46855000 -0.46825000 -0.45018000 0.01223700 0.01223700 -0.40252000 0.11038000 -0.38470000 0.00833510 0.00833510 0.01712400 -0.00429290 -0.00429290 -0.00429290 -0.00429290 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.00263220 -0.00263220 -0.47986000 0.00000000 0.00000000 -0.04644800 -0.00221680 -0.01972600 -0.48995000 -0.03789800 -0.03789800 0.00958830 -0.05481200 -0.03871400 0.43361000 -0.00069303 -0.50826000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.663731 12.293304 4.385749 9.761944 4.141817 10.489617 3.981359 NA 9.043640 6.141821 NA 7.303284 3.701250 10.619259 9.568968 3.063814 9.227048 9.233743 9.307521 11.042370 9.111923 6.806783 10.860398 2.800786 7.033444 9.430140 5.043642 2.063814 10.538650 1.701239 12.928864 11.997017 7.785677 10.392742 10.716862 9.871888 4.179296 1.215803 NA 6.409593 9.287283 10.450878 10.790225 5.812755 7.195892 8.315958 10.458995 5.353323 9.692365 NA 10.174664 2.594334 2.893886 10.139232 6.161053 6.788711 10.324346 10.150102 9.531424 4.675251 13.689831 1.893906 10.450878 NA 8.846634 5.448481 7.984005 9.408607 11.2971234 7.7487611 8.0638179 12.6126398 10.4242993 11.4395814 12.1171405 11.3008951 8.7315210 9.2765169 13.4461417 10.9643493 7.7917385 9.7542041 0.4788165 7.4135289 11.4378914 10.3665837 5.7012468 9.4036680 8.5305175 7.8995176 10.2965054 7.9245602 8.8393367 10.6850558 7.2113053 -0.1060942 6.7826366 6.9858044 8.6587645 10.5476337 7.4484814 9.6175538 7.2292832 6.6286030 10.5533626 9.8305309 10.4975193 9.8509950 10.0263927 10.0550248 10.0656952 7.4291682 1.4788683 9.9009202 8.5214269 10.7491507 4.9813549 10.3822353 10.2634902 7.7393830 14.0559199 10.1088191 10.8455420 12.0142928 10.5030717 9.2558368 1.7012385 TCGA-AC-A5XU 74 0 NA 455 breast stage iib t3 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 2 NA NA 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 6.242351e-07 8.6978054 8.8182616 11.0957723 9.2135937 9.3547858 9.2655548 9.8139059 9.5693242 10.2154820 13.7802534 11.5561589 10.8330967 0.6371001 12.3624756 1.9590282 8.9869433 7.6923916 9.1259538 6.2881610 13.0784325 -0.3628999 13.6412420 -0.3628999 10.0027756 9.7331655 7.4282722 1.6371001 8.7072304 9.9420310 0.6371001 8.7219177 6.1684916 -0.3628999 5.4950907 9.7728186 9.7566989 9.4396256 9.0985888 10.0680846 11.0398550 -1.3628999 10.3730884 14.9933722 8.9644038 11.7395772 11.0088860 10.3336423 4.7032004 3.2220781 8.2444395 9.6828691 0.6371001 10.1498499 7.6650154 4.4444617 3.9225119 10.3161496 12.0938488 10.1042053 10.8953809 12.4920751 8.1108153 10.8796881 10.7153669 10.7292058 10.6859367 5.2518175 11.5426844 11.2580165 -1.3628999 10.2328330 8.2646434 4.7359824 4.3650276 11.9508427 10.2337650 10.3440370 8.2518194 3.8070354 5.0121485 11.0733004 10.4774939 10.8272427 9.6677765 -0.5249600 0.0543080 0.6413100 0.1681300 0.1579400 -0.0054654 0.2993900 0.3303600 0.3303600 3.6569000 0.0899260 3.6569000 -0.3503600 -0.4927200 -0.5255800 3.6569000 -0.5309800 0.3173100 0.2835000 0.0538800 0.0264490 0.3250300 -0.2302400 -0.2388100 -0.2388100 0.1953500 0.9305100 2.4437000 0.6541500 -0.5249600 -0.5249600 -0.0100800 0.2548800 -0.0054654 -0.0054654 0.2973200 -0.3072700 0.3303600 0.3303600 0.3303600 0.3137300 0.3473800 0.0741960 -0.5256800 -0.5256800 0.2339300 0.3062600 -0.5383000 -0.5770500 -0.5255800 -0.5344200 -0.5398100 -0.5398100 0.3173100 0.2968400 -0.3057400 0.2669500 0.0413900 -0.2722200 -0.2071500 -0.2340600 -0.2388100 0.1205700 -0.6084900 0.7441400 -0.0072618 -0.5152200 -0.2729000 -0.350 -0.350 -0.526 -0.526 0.284 0.284 0.267 0.000 -0.268 0.792 -0.207 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 -0.008 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 0.000 -0.350 -0.350 -0.526 -0.526 0.284 0.284 0.267 0.000 -0.268 0.792 -0.207 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 -0.008 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 0.000 8.1974423 13.2922487 6.5197526 10.0939771 2.8850276 11.6436108 2.2220626 -0.3628999 8.9488578 8.2295663 NA 7.5499987 0.6371001 9.9797397 9.5447512 2.5439907 6.9454485 8.8045276 8.1369552 10.5228057 9.3671804 8.1468843 11.8862228 0.2220626 9.3986605 10.2895062 3.1606782 NA 10.6974675 2.9590282 12.0644222 11.9626959 8.3392822 10.4428532 7.4668318 11.0337141 6.4763136 1.2220626 NA 9.4266430 9.8532489 10.3994913 9.0465003 1.6371001 10.5091032 7.3650302 10.4359862 5.6923909 10.2206622 -1.3628999 9.2908501 6.6815041 4.2518175 10.1558609 6.4639755 6.1993524 9.7265598 7.4825990 9.0379889 0.6371001 13.6260603 -0.3628999 10.8157742 NA 8.5529887 5.9680262 7.7403974 8.6787684 14.843643 5.012148 8.766392 12.362476 10.060225 10.524711 13.078433 13.006230 8.688318 10.592759 12.108658 12.269650 8.244439 8.246288 NA 7.112843 10.490809 11.635171 8.279161 8.545502 8.908572 8.428272 10.720486 5.875515 10.884740 11.556159 9.090380 3.160678 6.003431 6.688808 10.226761 9.921933 8.921355 9.379419 9.418469 7.195530 10.939831 9.439626 10.620103 9.934599 11.998642 10.242126 10.911779 8.212649 1.807025 8.929695 7.298887 10.149850 7.421744 11.676885 10.316150 6.176269 13.717565 10.053379 9.896853 12.072649 10.346624 9.637814 2.096532 TCGA-AC-A62V 58 1 348 2 breast stage iv t2 n1a m1 male 2013 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.6355803 7.8034912 10.5107349 5.1776547 9.7091278 6.4000494 8.9417276 9.8989916 10.7818370 13.3932594 11.5930828 10.2513981 NA 12.6338812 2.3196757 9.8684976 5.5291275 7.8008022 6.1776567 12.1731152 NA 15.0773434 NA 10.5093313 9.9276224 6.2893015 2.8221795 9.5620558 10.7462898 NA 8.3475815 4.9245370 NA 1.3196757 7.6565543 9.1302472 9.3466600 8.0178017 8.8327451 9.0339213 0.3196179 10.3350907 14.5076462 6.7018817 9.5809870 9.6264968 9.8882652 2.8221795 4.7791074 6.3420427 8.6355799 -0.2653446 10.1462241 4.6416038 3.7347096 4.5676002 8.5468906 11.4914779 10.0356377 10.6112301 11.2592548 9.6632315 9.7933814 9.3585947 9.1259566 9.2796777 1.9046190 10.2420122 11.0864806 -1.2653446 10.1583543 8.4437968 0.3196179 2.8221795 10.0137433 9.1879837 10.1499267 8.6295308 3.3785671 5.5548927 10.9450801 10.0189589 9.5532954 9.9459932 -0.4424300 0.0158660 0.8661200 0.0020805 -0.4871800 3.6569000 0.4510500 -0.0071958 0.0000000 0.9555000 0.9555000 0.9882500 0.4463000 0.4347900 0.4412200 0.4412200 0.4412200 0.0043063 0.0043063 -0.0457700 3.4957000 0.0196430 -0.0332690 -0.4940200 3.6569000 -0.4728900 -0.5054600 -0.5054600 1.0434000 -0.4944400 -0.4424300 -0.4897400 0.0020805 -0.5253200 0.0000000 -0.0246610 -0.0015243 -0.5132100 0.0000000 -0.0465830 0.4634800 -0.0178030 0.9555000 -0.4927700 -0.4927700 -0.4927700 -0.4927700 -0.0123000 -0.0387140 0.4027700 0.4412200 -0.5032800 -0.5032800 0.0043063 0.0206230 -0.0215100 -0.0457700 -0.0118320 0.0196430 -1.0774000 -0.0332690 -0.0325870 -0.3024000 -0.4757500 -0.5054600 -0.5115600 -0.0099565 0.6410300 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 0.000 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 0.000 8.0543851 14.4469446 6.1270307 9.6431058 0.2757223 10.9316226 -1.2653446 NA 9.3026693 8.3857649 NA 6.0834410 2.7347205 10.2464658 9.2592548 4.6173573 4.5676002 7.6081572 10.1525656 12.9487286 8.5339787 5.4626348 10.7581210 -0.2653446 9.7612366 10.0102558 0.7347421 -1.2653446 11.1596667 -0.2653446 12.4444432 12.6555312 7.3121424 10.0131626 7.6918154 10.5041378 2.1941501 0.7347421 0.7347421 0.7347421 9.7226877 12.1777862 9.4549575 3.0566355 9.2167546 11.0180910 10.1682985 4.8432352 10.6643414 NA 7.7872810 1.7346988 2.3196757 9.3232498 6.4129254 0.7347421 9.5250617 9.1745440 4.3494219 3.3196757 13.9632312 NA 11.7276515 NA 4.6889077 3.7347096 8.0339213 8.6713511 15.110798 6.056642 11.106490 12.633881 9.676494 11.044758 12.173115 11.536219 8.693266 9.087860 11.632748 9.736825 6.342043 9.157829 3.944165 11.032203 9.979077 9.6355799 5.9635319 7.7845616 8.7899956 8.1982373 8.5051129 6.5802028 4.1941422 11.5930828 8.7556931 2.3196757 8.7248170 8.1148927 8.1075780 8.2225529 4.5676002 11.9827890 3.0566355 1.7346988 11.7543664 9.3466600 9.7233978 11.0324892 10.7148527 8.8484552 9.2612123 6.3567653 -1.2653446 8.9667981 0.7347421 10.1462241 6.5988996 10.2104466 8.5468906 6.3640699 13.5581799 10.4190235 9.4035981 10.8287909 10.1178773 8.3803714 -1.2653446 TCGA-AC-A62X 72 0 NA 417 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 3.467973e-07 8.8365762 7.7074578 10.2866608 7.1066017 8.4118711 9.6570111 9.0465268 9.9058390 11.8260264 12.2323933 11.5137857 9.9773014 1.5432484 12.4981922 2.9838418 10.1891846 7.0846426 9.7160536 6.3797700 6.2116469 NA 11.9100595 8.3652708 9.0882996 11.7267271 9.2045381 -1.2639580 9.4874580 10.7662363 -0.2641313 9.1994385 6.9502328 0.7359554 3.2594834 10.2461837 10.1093229 9.2799126 8.3923389 10.2672955 10.9641315 8.3761588 6.2828086 14.4244922 5.9044359 11.1702816 9.4882947 10.6791614 5.9158220 3.6428055 9.1798937 12.3709519 -0.2641313 10.9401795 3.4908011 7.6842816 3.7803101 7.8496559 11.7646834 10.0544569 10.7288524 12.2159468 8.7762037 10.9608201 10.6589035 10.8938924 9.6570111 3.9034336 11.7825265 7.0802099 NA 10.8945237 9.8703404 3.4407795 3.0578488 11.3281374 8.5954488 9.7693370 9.9257385 3.1282274 7.4672330 11.2844951 13.1638815 10.3990273 10.5636537 0.48239000 1.47860000 1.47930000 -0.00816420 0.98390000 -0.12109000 0.09492500 1.16630000 1.90010000 0.82437000 0.82437000 0.52503000 1.06080000 1.57710000 -0.02822000 -0.00954440 -0.00954440 0.48475000 -0.04712600 -0.58520000 -0.55477000 -0.50753000 -0.51167000 0.03453400 0.03453400 0.00746030 0.00746030 -0.01123000 0.08045400 -0.47014000 0.48239000 -0.03204300 -0.04503500 0.00041411 0.50411000 -0.60129000 -0.60129000 1.16630000 1.90010000 0.85700000 -0.57861000 0.48475000 0.57898000 3.22850000 3.22850000 -0.12187000 -0.06115300 1.57710000 -0.53825000 0.01600400 -0.00954440 -0.04486300 0.02819800 0.48475000 -0.04712600 -0.04712600 -0.58520000 -0.55477000 -0.52716000 -0.51167000 -0.51167000 0.03453400 -0.02176200 0.02651200 0.00746030 -0.51476000 1.91310000 0.14860000 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.555 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.128 -0.128 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 0.000 0.151 0.151 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.555 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.128 -0.128 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 0.000 0.151 0.151 4.94536892 15.12551174 2.82338253 8.96593432 0.05783147 13.52865348 -1.26395803 1.73591204 9.07909966 9.22876868 5.45015880 9.10920330 2.54327315 10.40922311 9.43375046 3.69011534 3.94536424 10.05558613 9.00854375 10.25456712 9.79179291 7.05784230 11.21594682 -0.66955633 9.16217881 9.65253991 7.21164791 NA 10.48116814 3.82337234 12.37401049 12.20644580 6.87546554 11.58551458 12.87170345 9.50327081 4.16217780 0.73595535 NA 2.32088898 9.24964159 9.77483301 7.62769803 5.07576365 11.20202364 8.15587418 9.76243752 5.89578489 11.05812387 5.63073163 12.10673762 -1.26395803 2.98384184 10.40196489 6.19878486 NA 7.43288176 5.33582622 2.73591204 7.13679327 14.12598218 NA 10.34970352 1.32088898 8.16427442 4.12822740 8.34693872 5.95508260 9.879195 8.388759 7.818063 12.498192 9.484107 10.855179 6.211647 5.915822 8.000357 10.596225 13.427221 11.433750 9.179894 6.477381 1.905851 8.245689 9.065710 11.109595 4.463832 8.826026 8.902077 8.676962 9.619772 2.905832 3.780310 11.513786 12.743905 NA 11.743467 8.014247 10.230270 9.499126 5.974318 9.688655 6.796609 3.057849 9.791393 9.279913 10.082428 10.417592 11.471258 10.576692 9.878659 7.925738 4.713195 10.030879 8.807376 10.940179 9.094565 11.110138 7.849656 7.339540 13.927436 10.198927 10.380672 13.348552 11.669973 8.672552 1.735912 TCGA-AC-A62Y 79 0 NA 530 breast stage iib t2 n1 mx female 2012 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 3 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 4.508365e-07 10.1761531 9.2226631 10.9637023 7.8319615 7.7788177 10.0073836 10.0359755 10.5128027 9.9253970 14.5295387 11.7927909 10.5038241 -1.2792838 12.1396009 1.8907580 11.3921458 6.6156443 7.6126098 9.8838465 12.9579611 -1.2792838 13.5108689 7.6486042 9.6067052 10.0822214 7.7264505 -0.2791087 11.9785216 11.5815249 1.5281712 7.5378093 7.9253972 NA 3.5788059 9.8488202 10.4064507 9.7542488 10.3794836 9.6596704 10.9103416 2.1802434 11.4162717 13.8843183 7.0539367 9.8016101 9.8391181 9.8449472 2.9687543 6.3355351 8.1365677 11.5404063 0.3057955 9.7720348 4.9876119 6.7542488 5.1965598 10.2301061 11.7339741 10.5370096 11.8092829 12.8661212 8.5616038 10.3705311 10.3493216 11.5852055 9.7306546 4.4212637 11.5257636 10.6574639 NA 10.0838655 8.7080900 2.1213802 5.2443886 9.8175411 9.3888243 9.2541556 9.0404980 2.7208257 9.3619745 13.3795952 12.8391181 9.7073790 9.4020643 0.08710000 0.76102000 0.76102000 -0.00650500 0.01419000 -0.39432000 0.00000000 -0.22158000 -0.22158000 -0.02201200 -0.02201200 -0.02178400 -0.42117000 -0.42298000 0.37611000 0.24191000 0.24191000 -0.00512270 -0.00152430 -0.43669000 0.38833000 -0.04115900 -0.43778000 -0.43778000 -0.43778000 0.31386000 0.31386000 0.31386000 0.71246000 0.08710000 0.08710000 0.36231000 -0.00650500 -0.39432000 -0.38089000 0.00055459 -0.00299260 -0.22158000 -0.22158000 0.00346870 0.33383000 0.32785000 -0.03791700 -0.02246900 -0.02246900 -0.02246900 -0.02246900 -0.42298000 -0.42298000 0.29093000 0.24191000 0.24191000 0.24191000 -0.00512270 -0.02492700 -0.02492700 -0.39575000 0.38833000 -0.04115900 0.30557000 -0.43778000 -0.43778000 -0.00470790 0.31386000 0.31386000 0.71246000 0.34892000 -0.46121000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 0.000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 0.000 8.2868798 12.9896603 3.2443848 10.2787682 2.4212637 10.3239885 1.8907580 0.3057955 8.5281810 7.5473742 NA 7.0871477 2.9687543 10.4542649 9.5201075 2.5281712 8.3682843 9.1648054 10.4823771 9.9204983 8.9257271 7.8526831 10.6333410 4.1131420 8.4143127 9.3216679 2.7208257 NA 10.0849605 3.2443848 12.6980164 12.2903255 7.2286205 10.0062282 10.1751252 9.6604051 2.6277236 1.3057955 NA 3.0427494 8.2849754 10.0297336 9.5568762 5.4757140 7.5262152 7.1761532 8.9204982 6.5087281 8.5136163 0.7208038 11.7174759 -0.2791087 4.7208257 9.7317105 6.5410052 0.3057955 9.2365256 8.5678831 4.4212637 NA 13.5096971 -0.2791087 11.1518011 NA 8.2365256 4.3057882 7.9946216 8.8162230 12.529478 6.379037 7.880697 12.139601 9.978803 11.032290 12.957961 11.740938 9.245368 10.255615 13.679560 11.229859 8.136568 8.006228 -1.279284 6.585012 11.472579 10.3866059 7.1761532 10.3327728 8.1023689 7.3646819 10.1159744 7.2561011 9.9496446 11.7927909 6.2754150 NA 4.3057882 7.9343189 10.1653232 10.1072273 7.4890106 9.3565440 9.8208311 4.0062262 11.7272134 9.7542488 11.2585296 9.8907508 11.3142170 9.6179150 9.6757493 7.8029751 2.3057955 8.8657391 1.3057955 9.7720348 6.2677212 10.3221324 10.2301061 7.4622929 13.1403911 10.6822756 10.7239924 12.2745752 10.1596177 8.7963051 0.3057955 TCGA-AC-A6IV 47 0 NA 568 breast stage iib t2 n1 mx female 2012 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1696676 9.5693908 11.0124280 8.9219641 8.7777422 9.1624812 9.2924330 9.8056887 10.3063564 9.2404837 11.0312902 10.3002303 1.1017845 12.8226707 4.3497120 10.5175270 6.0942509 8.9283336 9.3281974 12.1211443 0.8387501 13.7876290 5.0714109 9.7792876 10.1448124 5.9005263 0.1017845 10.5329345 9.0206483 3.4710183 8.3685719 7.3654458 -0.4831780 5.1461786 9.7894525 9.6633914 9.8716230 9.7818516 9.2146591 10.8171752 2.9762536 9.8967424 15.0078929 9.4981046 9.6075835 10.8683141 10.8760232 6.5936376 5.1606782 8.9166346 11.9010668 1.6867470 10.9808578 7.1786011 7.2344994 6.2717095 10.1148752 11.9236920 10.5062172 12.0353529 12.6841624 8.2932555 10.8194616 10.9260333 10.8197471 10.7582101 5.0086751 11.7821447 11.1710112 0.5168220 10.8194616 8.6954876 4.1895320 7.0559819 10.8569510 10.1218391 10.6892502 9.4304601 5.0714109 8.6627549 12.7770807 12.7593269 9.9509297 10.1808254 0.1164900 0.1164900 0.2364300 0.0034687 0.0000000 -0.0011087 0.0034687 0.0921700 -0.0026784 -0.0103700 -0.0103700 -0.0103700 -0.0158790 -0.0318490 -0.0453640 -0.1566100 -0.1566100 -0.2574500 0.0946730 0.0140510 -0.0042929 0.0024969 0.0034687 0.0034687 0.6948400 -0.0070576 -0.0070576 -0.0070576 0.0068044 -0.2503100 0.1164900 -0.0136770 0.0000000 -0.0011087 -0.0011087 0.0034687 0.0034687 0.0921700 -0.0026784 -0.0033243 -0.0217840 -0.0217840 -0.0103700 0.0013868 0.0013868 0.0013868 0.0055529 -0.0318490 -0.0318490 -0.0453640 -0.1566100 -0.1566100 -0.1566100 -0.2574500 0.1789000 0.1789000 0.0140510 -0.0042929 0.0024969 -0.2458200 0.0034687 0.0034687 0.0015296 -0.0070576 -0.0070576 0.0068044 -0.0022168 -0.2478800 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.469 0.223 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.469 0.223 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9747166 13.5734604 6.5829112 10.9993786 4.4576928 10.7013882 4.0086751 1.1017845 8.7847798 9.7611865 -1.4831780 9.1722102 5.7359905 9.8160307 9.5371081 5.7647495 9.8177472 9.3425765 8.5584819 9.5523092 9.6491746 7.6383563 12.5590806 3.9091394 8.5488685 10.0564662 3.7647495 2.1017845 11.8907754 3.8022242 12.6502860 11.6299137 8.8183189 10.2608156 9.8285710 9.2344992 4.6461050 2.4237126 1.1017845 5.2981817 9.1552587 9.5280499 8.7262761 7.6174851 9.2107975 7.0637176 10.3548447 5.2850063 9.8793144 0.1017845 11.8716230 3.3748030 5.3241769 9.1054997 6.4239529 5.0403840 10.4622666 10.3310046 6.9346757 1.9762536 13.4547941 2.1017845 10.6243667 -1.4831780 8.0790650 6.2650149 7.6069352 9.2998209 13.955689 5.802224 8.528050 12.822671 10.391620 9.992050 12.121144 13.696965 8.565895 10.201571 13.096963 11.228275 8.916635 8.613538 2.838750 8.012678 11.852353 11.411830 6.943088 8.604286 9.201571 8.182158 10.474643 8.547490 8.498390 11.031290 7.978302 1.516822 7.365446 7.087324 11.054526 10.830839 8.448668 9.328197 11.511176 6.522447 12.239033 9.871623 10.574814 9.808569 11.142760 10.888599 10.468836 8.457870 NA 9.548738 6.086678 10.980858 7.778918 11.324918 10.114875 7.149818 13.895118 9.871623 10.137959 12.509761 10.818319 10.287899 2.217262 TCGA-AC-A6IW 73 0 NA 413 breast stage iia t2 n0 (i-) mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 5 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.056056 8.505890 10.714207 8.295122 9.192056 9.426720 9.131447 10.036796 12.276397 11.450732 10.315607 9.905887 1.944933 11.190869 1.681899 9.644782 9.046458 7.933605 11.115888 3.681888 0.681854 6.612622 8.733910 10.231328 10.579126 5.974667 1.529871 11.925317 11.030614 2.529871 9.627915 6.811169 NA 2.167326 8.312699 9.833663 7.272847 10.003814 8.998394 9.801864 1.529871 6.211707 14.510300 9.040599 11.774377 10.592079 9.709239 4.404351 NA 8.804973 9.069041 NA 10.127314 6.067316 7.519829 6.108150 10.635791 11.741636 10.825779 9.988859 12.128142 6.147860 10.337595 10.475616 9.945390 10.339025 4.087879 11.542507 8.386481 1.529871 10.314881 10.265345 4.857090 4.883518 12.318510 9.616756 11.273782 9.729555 8.129796 3.167310 12.278448 11.545298 9.486662 9.428736 2.86960000 1.20070000 0.28041000 -0.01572900 0.62405000 -0.30553000 -0.04089300 0.31963000 -0.01857300 1.23240000 1.23240000 0.93202000 0.18782000 -0.14824000 -0.00189610 -0.18102000 -0.17829000 0.70832000 0.00416720 -0.15529000 -0.17031000 -0.09684100 0.00374130 0.00374130 0.00374130 0.44952000 0.41747000 0.10307000 0.19583000 -0.19688000 0.23550000 -0.18232000 -0.00678650 -0.30553000 -0.15988000 -0.04089300 -0.68342000 -0.45469000 -0.01857300 0.09144000 0.18908000 -0.04170700 0.35707000 -0.22164000 -0.18811000 -0.18811000 -0.18811000 -0.17765000 -0.18761000 0.00805150 -0.18102000 -0.18867000 -0.24756000 0.01656000 -0.00459990 0.00041078 -0.17171000 -0.61422000 -0.10237000 -0.22215000 0.00374130 0.00374130 0.13198000 0.44952000 0.10307000 0.35138000 0.21115000 0.34664000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.417 0.417 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.000 0.115 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.000 0.000 0.756 0.756 -0.188 -0.188 0.000 0.000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.417 0.417 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.000 0.115 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.000 0.000 0.756 0.756 -0.188 -0.188 0.000 0.000 9.5116084 12.9076956 5.0603976 9.1624739 5.0742014 11.2574249 4.3372401 2.8835231 9.4159177 9.4036684 1.8193821 7.2817984 6.1543726 10.9399805 9.9373863 1.3599709 7.4125258 11.0512649 7.5815448 9.5292562 8.8729943 6.7086852 11.7914552 4.8677532 9.6049160 10.7891027 2.8193821 -1.6402540 10.9762766 4.5694121 13.5120443 11.9771954 6.4579898 9.2093627 11.0363554 10.9959024 4.4043514 2.5298709 -1.6402540 1.1672937 10.0359146 9.1239998 7.5173048 3.4043582 7.6521179 8.1785399 10.2709749 3.5694060 10.4115064 0.9449334 12.9073341 5.1801359 3.6818877 9.6291192 8.6080629 5.3024726 9.5065262 10.6688654 7.8173387 4.5097022 14.0936350 1.3599709 11.1343328 NA 9.2951226 2.0603933 7.9965820 7.0603976 11.568715 9.038558 7.581545 11.190869 9.642467 11.400419 3.681888 10.166104 8.419843 10.890537 14.276677 13.784157 8.804973 8.042952 2.752278 8.400247 9.908298 10.149491 5.325743 9.992498 9.377462 8.398877 8.904507 8.373978 6.167312 10.315607 10.584261 NA 9.110664 8.799238 13.118961 11.147044 8.397504 9.912627 6.974667 6.974667 10.383154 7.272847 10.465211 10.143365 11.599705 11.130415 10.133509 7.354311 NA 9.526290 7.074204 10.127314 2.266846 10.808107 10.635791 8.015005 16.254195 10.912867 10.355725 12.030503 12.094667 8.231863 1.944933 TCGA-AC-A6IX 49 0 NA 373 breast stage iiic t2 n3a mx female 2013 NA yes infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 2 6 NA NA 3 4 2 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1895849 9.7354360 11.3224540 9.1864285 8.5996592 9.6985621 10.0698977 9.5590948 10.2461165 9.0931989 11.6618577 10.5295073 1.5443865 12.5117833 3.4512639 9.6858454 7.1882328 8.7477247 9.6384546 12.4421278 3.0679312 13.4686791 6.5556045 9.5205399 10.7397491 6.9622297 1.1293490 12.0095160 10.0022707 4.4270228 7.9215875 7.4810147 -1.4556135 4.6941224 9.4868913 10.2487128 9.2756960 11.0796522 10.2348114 11.1927344 -0.4556135 11.0686737 14.3458579 9.7427667 10.6730156 10.6688214 10.4197423 4.9366945 5.8842267 8.7067681 11.2733602 -1.4556135 10.8814412 5.8389971 6.1517066 5.0201110 10.2769683 11.9966181 10.6401036 11.9180577 12.7667945 8.6463524 10.2735728 10.0254296 11.4444890 10.4050759 4.6736582 11.5925231 11.8252926 -0.4556135 10.5764226 8.4662176 4.1347384 5.5101613 10.2016954 10.0742954 10.2761202 8.7055087 2.6318493 8.7143019 14.2787954 11.5119634 10.4000240 9.6305130 0.0000000 2.6611000 0.4826500 0.0080301 -0.0077746 -0.0101680 -0.0036276 0.0088654 -0.0149100 0.5169600 0.0221370 -0.4914300 -0.4730200 0.0197560 0.0126280 2.1854000 0.8534000 0.0081693 0.0081693 -0.0084649 0.0021928 0.0309870 0.0526400 -0.4495600 0.0546330 -0.4161000 0.0624810 0.0723690 0.0387440 -0.4391000 0.0000000 -0.0072736 -0.4835700 0.0738060 -0.0210570 -0.0036276 -0.0036276 0.0088654 -0.0149100 -0.0149100 0.0084477 -0.0066696 0.0219970 0.0203160 0.0203160 0.0203160 0.0203160 0.0197560 0.0197560 0.0126280 -0.4631500 -0.4758300 -0.4721700 0.0081693 0.0081693 0.0081693 -0.0084649 0.0302830 0.0309870 -0.4693100 -0.4529900 -0.4495600 -0.4736600 -0.4161000 0.0624810 0.0387440 -0.0072221 -0.4499200 -0.473 0.000 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.473 0.000 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2731478 13.4128136 7.0989658 11.0213762 3.3858451 10.7513912 2.4512771 NA 8.9986762 9.7839753 1.8663146 8.1986906 5.5778004 10.2487128 9.2159178 2.3517414 9.8099919 9.5839814 11.0246622 10.1664287 9.9951345 7.6991949 12.0407314 3.8297785 6.3645567 9.6626691 4.0038091 NA 10.9519102 3.9019288 12.0561295 11.7283223 8.4677042 9.8808834 10.5650096 9.5373153 3.4512639 1.1293490 -1.4556135 2.9366850 8.5401439 9.0211230 10.5709003 6.9955885 10.0833757 6.4452433 10.5684777 5.3387916 9.6016917 NA 11.0630300 2.3517414 4.5887686 9.5016531 6.0252880 6.0600777 9.5094397 9.2577633 10.5788319 1.1293490 13.4766839 0.8663146 10.5252305 NA 7.7017237 6.9537681 8.3581580 9.4201261 13.489469 6.588772 8.419358 12.511783 10.536253 10.854422 12.442128 10.519508 9.840593 10.535190 14.161155 9.528083 8.706768 7.829779 2.129349 7.591501 10.977962 11.308626 6.678803 9.025167 8.731729 7.188233 10.688532 7.383581 8.534481 11.661858 7.504379 2.631849 5.244815 6.764320 11.131217 10.213705 7.414742 9.178280 10.636804 7.258623 11.190353 9.275696 10.687760 9.266330 11.119207 10.458014 10.614162 8.282469 8.848158 9.712729 7.417821 10.881441 7.209713 10.728815 10.276968 7.405464 13.936325 10.056623 10.055635 12.216913 10.614833 10.083536 3.451264 TCGA-AC-A6NO 43 0 NA 51 breast stage iib t2 n1a mx female 2011 NA NA infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 3 3 NA NA 1 4 3 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5954924 8.9606409 11.9404631 8.5348771 8.5758179 9.6789374 10.9302674 9.5705760 10.2126605 12.6246000 10.9566279 10.1069651 6.2160221 13.3597035 3.5683240 9.6955441 8.7044601 8.1928146 9.3523039 12.7362434 4.8902521 14.2836850 5.9282187 10.0070378 10.8134008 5.5069224 NA 8.1232399 9.5862455 2.5683240 9.3876512 7.0918860 0.2463473 3.8708874 10.0649777 9.5884701 10.3156215 10.5940168 10.0526766 11.0705587 3.1208661 11.7475692 14.5452456 8.8420385 10.3743897 11.1229124 10.8086379 4.2463929 6.3893534 8.2482730 10.9288049 -1.3386152 10.3644713 2.6614304 4.0189813 4.2761393 9.9839245 12.0967126 10.8995391 13.4864414 12.7904744 8.5194141 11.0126483 10.5770509 10.8216195 11.0104377 4.8512593 11.1749138 11.0073926 -1.3386152 10.3343002 8.7971424 5.4080155 2.9833676 11.3549199 9.9782802 10.1572879 9.3961426 1.6614304 9.9205878 12.2475690 11.2976044 9.9566279 10.1259787 1.10590000 1.56570000 1.62690000 -0.00636680 -0.01146600 -0.00387790 -0.00429290 -0.00722010 -0.00470790 0.22376000 0.22376000 0.22376000 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00691950 0.00052742 0.00527490 0.00736090 0.00736090 0.00736090 0.01223700 0.01223700 0.01223700 0.73322000 0.00285460 -0.00512270 0.00305220 -0.00636680 -0.00387790 -0.00387790 -0.00429290 -0.00429290 -0.00722010 -0.00470790 -0.00470790 1.01010000 0.49372000 0.22376000 -0.00097017 -0.00097017 -0.00097017 -0.00097017 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00263220 -0.00691950 0.00052742 0.00527490 -0.76492000 0.00736090 0.00736090 0.37680000 0.01223700 0.01223700 0.72002000 0.00527490 -0.50225000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 1.627 0.723 0.723 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.719 0.494 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 1.627 0.723 0.723 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.719 0.494 0.224 0.224 0.000 0.000 0.000 0.000 8.5116198 12.8392418 7.5653146 9.9223525 3.8313605 11.0497194 2.8313503 NA 9.3409132 7.8338603 -0.3386152 6.6755647 1.2464081 10.3718090 10.0012829 4.0537543 7.4296176 9.4550362 8.3601377 11.8487850 9.7332037 7.4816122 10.7071926 2.2464081 9.5029972 9.5022108 8.2274869 NA 10.7952174 2.2464081 13.0736058 11.9146896 7.3338584 9.7574892 6.4943228 9.6927895 2.3618806 1.6614304 0.2463473 10.2184179 9.4213211 9.7561705 10.0777027 3.9468338 8.6291059 8.3196446 10.5417818 7.0494500 9.4179892 NA 9.3088914 1.6614304 3.9093603 10.2781426 7.4725828 4.3338602 8.5698256 6.7907160 6.5743226 1.9833494 13.5541655 1.2464081 10.0819196 -1.3386152 8.6112598 4.7907147 7.4687877 8.1043765 13.484622 5.899838 9.116760 13.359704 10.277982 11.376108 12.736243 12.368792 9.021973 10.146256 13.069763 10.611624 8.248273 8.528712 3.519416 6.880601 11.431684 11.2669125 7.3444273 8.7932899 9.5022108 8.9363935 10.8899931 6.4558483 8.1712078 10.9566279 6.8263400 NA 8.5638079 7.9198579 10.9663546 10.4133954 9.1104165 9.4419727 10.8006646 4.6387110 11.6240543 10.3156215 10.1028210 10.5139624 10.7653764 10.0342980 10.7173932 8.9491453 NA 9.9915152 5.6156282 10.3644713 5.7382490 11.4047022 9.9839245 7.7436355 14.1166317 10.2701498 9.9543297 12.9766533 11.1822971 10.0233768 -0.3386152 TCGA-AC-A7VB 51 0 NA 250 breast stage iia t1c n1a mx female 2013 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 3 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6318791 9.1083838 11.7388989 9.0960924 9.6082718 9.2095504 10.9792322 9.0648977 9.1076186 12.7905852 9.5968671 10.3153954 -0.7727518 14.7510002 2.1341552 9.5946846 6.4318402 8.1505972 9.2223303 13.4484792 6.7271159 14.6499095 1.9277069 9.4590729 11.6965300 6.4893647 2.3972006 5.5033933 10.8049346 -0.7727518 6.8009167 6.5536999 NA 3.3565523 10.1148711 8.5241859 8.5748913 9.0281696 10.0569925 10.9135514 2.5492009 11.2665315 13.5800374 9.4278129 11.7897483 10.3996973 10.5036850 5.7191232 8.1416550 8.5693445 9.6125930 NA 10.5581866 2.6867022 2.7508423 2.6195773 9.2349980 12.2072308 10.4686571 10.6704723 12.9704211 7.9568907 10.3371004 10.4187670 10.9052096 11.1352870 5.2045516 11.3644210 11.8117625 -0.1877072 10.1675834 8.2202080 4.0384801 3.3972006 11.0165996 9.4590910 11.1870906 9.3047531 1.0346383 6.1281366 10.7571883 8.9509306 10.3968816 10.0968636 0.00152080 0.00152080 0.79050000 0.00558830 -0.00992130 0.00000000 0.01967800 -0.00340370 0.00058991 3.65690000 -0.84225000 1.53330000 0.02514500 -0.00079631 0.00642260 0.03854800 0.82123000 0.01813900 3.65690000 -0.85478000 0.86538000 0.01911800 -0.83120000 0.83063000 0.83063000 -0.78115000 0.03245800 0.03245800 0.02393400 0.00152080 0.00152080 -0.01019700 -0.87555000 0.00000000 0.00558830 -0.00987000 -0.01240300 -0.00340370 0.00058991 -0.00812730 -0.00268880 -0.00093488 -0.86024000 0.00556370 0.00556370 0.01182200 0.01182200 -0.00079631 0.00976310 0.00642260 0.03854800 -0.86874000 0.00878820 -0.86111000 -0.86285000 -0.86285000 -0.85478000 -0.85184000 0.01911800 -0.85359000 -0.83120000 0.83063000 0.02388200 -0.79451000 0.03245800 -0.87765000 -0.84889000 -0.83517000 0.000 0.000 0.000 0.000 -0.841 -0.841 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.826 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 -0.841 -0.841 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.826 0.000 0.000 0.000 -0.110 -0.110 6.1814664 10.7365499 1.0346383 9.2489437 NA 11.2246257 2.7508423 NA 9.1288909 6.2216239 NA 5.9619798 1.6867022 10.7481340 8.9534879 6.9102638 6.2716647 8.5671199 5.9551896 11.7011023 10.4448609 7.7664289 10.6774500 -0.1877072 8.8084703 9.1872716 3.3565523 1.9277069 11.7496061 3.9821539 11.8224107 12.6106366 6.2716647 9.7370448 10.5892135 10.4934707 4.1814683 3.6867022 -0.7727518 2.9821631 9.2152442 9.7340731 10.8359866 3.7508316 9.5785016 7.1311511 10.1247370 4.8854816 10.5395855 -1.7725053 8.5344706 0.5492256 5.1697847 9.3263875 7.3519083 2.5492009 9.6254791 7.2496378 6.4512721 0.8122107 12.6543861 -0.7727518 10.4686571 -0.1877072 7.5826207 4.7350618 8.0216857 7.8693212 13.580063 6.610975 9.096864 14.751000 9.941086 10.555384 13.448479 13.382207 10.159064 10.569622 11.701736 11.152268 8.569345 8.727116 1.812252 8.535609 10.471336 11.4079560 5.7350645 9.0743272 9.0554064 9.9329021 10.9622291 4.4367215 9.1022511 9.5968671 9.3597695 0.8122107 5.7971245 8.8388478 8.4488568 10.3484794 7.3693766 10.4671666 8.4158588 3.2272636 12.5990253 8.5748913 9.5178646 10.6345375 12.3168858 9.0546125 11.0398482 8.4656746 -0.1877072 9.2441685 3.0852547 10.5581866 2.9277069 11.1268155 9.2349980 8.2016843 13.5920644 10.5025213 9.4769758 12.0853479 9.7985484 9.7808991 -0.7727518 TCGA-AC-A7VC 56 0 NA 1 breast stage iib t3 n0 mx female 2013 NA NA metaplastic carcinoma 0 white not hispanic or latino NA NA 2 5 NA NA 2 2 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.7717153 8.8460250 11.0513987 6.4702505 8.7634478 7.5152607 5.1533960 10.2408570 11.5013457 6.4600561 9.4791139 10.1350865 1.6424243 10.5047596 3.1278644 12.5346715 6.7042080 7.8002845 8.8731731 5.4290301 NA 6.5872900 0.9055049 10.6091338 3.7799321 4.0209466 -0.6794576 8.7149667 10.7634476 5.2273945 6.6514206 7.6955436 NA 5.8282990 8.8499345 9.1549753 8.8596631 7.7881095 8.9893891 9.3247247 NA 4.5299583 15.6474076 8.0715793 10.4923065 10.1382873 8.9858399 4.8750920 -0.6794576 8.3892824 10.0295879 1.3204847 10.2739731 4.1278561 7.9425561 5.9643594 8.6955436 12.2063911 10.0594409 12.4985465 11.6840914 7.8401403 10.0287259 10.3070573 9.8203500 10.6271355 2.1278644 11.0783108 9.7520017 NA 10.4696161 9.2790568 8.9227206 2.9054664 11.5945910 10.0475737 10.3607939 8.2213711 -0.6794576 6.7128214 14.1936598 11.7240488 9.8322568 10.8932044 0.5362600 0.5362600 0.3218900 -0.0909610 0.0827650 -0.3269000 0.2071700 0.2274500 0.2381400 0.3649300 0.3649300 0.9614400 -0.3244200 -0.1074900 -0.1409100 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.1577100 -0.2649200 0.0782940 -0.0033142 0.0015391 0.0015391 -0.0178030 -0.0178030 -0.0178030 0.0706730 0.5362600 0.5362600 -0.5538000 -0.0909610 -0.3269000 -0.3162200 0.2071700 0.2071700 0.2274500 0.2381400 0.2082900 0.2741800 0.1766400 0.3649300 -0.2270600 -0.2270600 -0.2270600 -0.1574500 -0.1074900 -0.1074900 -0.1409100 -0.1409100 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.0198630 -0.1963700 -0.2649200 0.0719240 -0.1584800 -0.0033142 0.0015391 -0.3007500 -0.0689310 -0.0178030 -0.0091286 0.0632230 0.0059700 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 0.000 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 0.000 7.4954297 16.0312164 9.2977841 10.8577225 1.9030768 10.1197858 1.3204847 2.7799321 9.6692323 9.9250574 NA 8.3233192 6.5396722 10.0139910 9.5553215 2.7799321 5.5493242 9.5660569 8.6824479 10.4491430 9.0214120 6.3757867 14.1886997 0.3205424 3.4904289 10.3275314 4.3649016 NA 11.5432991 6.2862879 13.8266877 13.5923319 9.7404643 8.9073441 9.4381473 10.6093702 4.2273945 8.4854111 -0.6794576 0.3205424 8.9876156 10.7618922 5.7799347 4.2273945 7.7588388 7.6197123 10.3027848 6.9999842 10.3933067 NA 10.4185363 3.4079645 5.6242852 9.3066733 7.8908534 0.3205424 10.0131197 7.5684320 3.2274022 NA 14.4262899 1.6424243 11.2776062 NA 9.1116670 6.3757867 7.7881095 8.6059065 11.350381 8.784029 8.351171 10.504760 9.780960 10.859178 5.429030 10.819852 9.281954 10.057751 12.504140 12.494494 8.389282 9.449787 6.587290 7.855779 9.465162 11.1533941 8.3063461 8.8789249 8.5636783 8.5872907 9.7083599 5.2512419 4.9643617 9.4791139 11.3872661 2.1278644 7.7383564 9.7454683 12.2810492 10.4847826 8.4778509 10.2386220 5.7634488 2.4904418 10.7207058 8.8596631 10.3338268 10.7952241 9.1753724 12.4523611 10.4191942 7.1406836 NA 10.1697450 8.8922568 10.2739731 11.2360101 10.2333934 8.6955436 7.5636783 15.4618529 10.8208481 10.3899539 11.6653548 11.7504339 9.1326815 -0.6794576 TCGA-AC-A8OP 72 0 NA 614 breast stage ia t1c n0 (i-) mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 NA NA 3 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.20808496 9.61425599 11.64466441 9.30040496 9.84857834 9.12825731 10.33261586 9.63882124 10.04021053 13.00284778 11.70630792 10.04658000 4.85746352 13.49802919 4.00430363 9.48160410 5.69396360 8.87188060 9.34702269 12.82633393 2.22002033 14.90468277 5.07247458 9.03687308 11.05748425 5.83146687 -0.94981178 8.76726878 9.63882124 1.05011855 7.42514623 6.23001467 0.05004888 3.22003581 10.25773103 10.41205036 9.00284792 10.60085335 10.01155630 11.70496630 3.57366536 12.43489029 14.23075389 10.47423079 10.17034447 10.25651041 10.71277494 4.44242602 4.88299512 8.65001954 12.27591648 NA 11.13092405 5.02738852 5.57366839 4.69396081 9.27410811 12.20080581 10.03381267 11.98545578 12.84249015 8.78142562 9.94719566 9.88569119 11.05573111 10.89638047 5.02738852 11.11147772 10.53039190 -0.94981178 10.36071927 9.69125515 4.84270233 4.50953750 9.97788450 10.49718980 10.86629022 10.39938774 4.17939162 7.67946321 12.77334084 11.36582221 9.77462038 9.28132779 -0.201890 0.609660 1.126800 0.423310 -0.097162 0.000000 0.437800 -0.213150 -0.209110 -0.114720 -0.114720 0.860590 0.091272 0.100280 0.100710 0.089601 0.089601 0.089098 0.081368 0.108740 -0.056334 -0.102260 1.771100 -0.106340 3.218300 0.733180 0.058909 0.058909 0.389350 -0.513640 -0.201890 -0.021811 -0.097162 -0.196520 0.091127 0.125170 0.125170 -0.213150 -0.206000 -0.209110 0.375910 0.363650 -0.837910 -0.500400 -0.504960 0.085384 0.085384 0.100280 0.805350 0.100710 0.089601 -0.507030 0.129300 0.099405 0.091483 0.112400 -0.511510 -0.056334 -0.102260 -0.489020 -0.495710 0.030142 -0.493000 -0.031522 0.058909 -0.195020 -0.200150 -0.205870 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.709 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.861 -0.500 -0.500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.709 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.861 -0.500 -0.500 0.000 0.000 8.79494054 13.66061237 7.78819890 10.72164762 4.17939162 10.51209748 5.37203620 0.05004888 9.06691474 7.70474265 -0.94981178 7.59313861 3.50954384 9.70295150 10.71499818 4.85746352 9.78312184 9.62753534 11.13790084 10.21564171 10.08478169 8.03310029 11.28222763 3.37203271 9.29328058 9.75660252 4.54196081 NA 11.80687131 4.40765866 12.00611962 11.62091099 7.87982950 9.58926538 8.71010247 9.49201319 5.13756910 0.63505783 0.63505783 10.88062171 10.76306336 9.48473470 10.03238714 5.23993261 6.91608726 8.31689288 9.74097747 5.83146687 10.64349764 0.05004888 12.44389917 2.50954384 5.09450212 9.35332792 6.03537977 4.22002807 9.50953810 8.06691474 5.29803507 0.63505783 13.70418310 0.63505783 10.15993716 NA 6.37203446 6.06133339 7.63506872 8.84614601 14.5987960 5.6648156 8.3239023 13.4980292 10.4153354 10.3955118 12.8263339 13.3282656 8.7712059 10.6880899 13.1629533 11.8926533 8.6500195 8.4273170 -0.9498118 8.7083180 11.7056373 11.169372 6.998474 8.407659 8.960000 7.851006 10.639079 7.394403 8.414241 11.706308 8.247323 4.573671 3.693966 7.271791 10.616161 10.635069 8.482648 9.472171 11.474010 6.565806 12.673803 9.002848 10.273505 10.174874 11.937708 10.332037 10.699363 8.697565 NA 9.104290 6.158632 11.130924 5.956998 11.481082 9.274108 7.708318 13.311026 9.522797 9.546960 12.273052 10.766497 10.896772 1.372061 TCGA-AC-A8OQ 72 0 NA 34 breast stage iib t2 n1a mx female 2011 NA NA infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.33919441 8.79433366 10.94056460 9.05765442 8.68171946 8.97359033 9.30942246 10.26792081 11.78159585 13.39234830 10.23409135 10.24796963 1.40375854 12.43908358 3.32974074 11.37268934 7.97054999 9.43605583 9.00513412 5.01254186 NA 7.49965936 5.43935718 10.18152910 10.02651860 7.18509446 2.88916200 10.03381969 9.03017383 1.08181681 8.24671353 7.44812870 -0.91811503 8.09582687 9.13301554 9.79948287 8.97054971 9.21494877 9.33210504 11.06480008 3.88916200 6.92729679 16.11787279 8.50901447 10.21365057 10.55348175 10.59059173 4.91469845 -0.91811503 9.01549729 9.92022258 0.08174865 10.17786274 6.03600213 6.57365930 6.48268536 9.89799017 11.50754695 9.55449734 11.87926542 12.49133005 8.66676902 10.48694802 10.25035954 10.49860402 10.92258448 5.38558634 10.92376394 9.80972698 1.40375854 13.27963752 9.07898602 5.06342960 5.79605259 9.49013627 10.19619957 10.91706747 9.31901655 3.98869377 6.09303403 12.45833894 12.07615996 9.86234631 9.17588408 0.2171400 1.4305000 1.0926000 -0.1611900 0.2621600 -0.0254830 0.5383700 0.5771200 0.0018030 0.0000000 0.0000000 2.2874000 1.2201000 -0.1073600 -0.1210800 -0.1245700 -0.1387100 -0.2108200 -0.1227800 0.0663720 -0.1584800 -0.0935350 -0.0440090 0.1152100 0.0709600 -0.2559900 1.2914000 -0.2796500 1.2205000 -0.3262300 0.2226800 0.2362800 -0.2828700 -0.0978910 -0.1527200 -0.3577200 -0.3366400 0.5771200 0.0018030 0.1945100 0.0780060 0.1895000 0.0069435 0.0056919 0.1917800 -0.1256900 -0.3087400 -0.1073600 -0.1551500 -0.1340600 -0.0957800 0.4660500 -0.5112500 0.5374900 -0.1736000 -0.1736000 0.0697010 -0.1584800 -0.1122100 -0.3211200 -0.1534900 0.1152100 -0.3226800 -0.2798900 -0.2796500 -0.0053992 -0.1330300 0.4054400 0.089 -0.128 -0.134 -0.134 -0.174 -0.174 0.000 -0.330 0.000 -0.131 -0.131 0.000 0.000 -0.281 -0.281 -0.256 -0.256 0.232 0.232 0.617 0.617 -0.134 0.218 0.000 0.000 -0.263 -0.263 -0.123 -0.123 0.164 -0.351 0.575 0.000 0.211 0.211 0.000 0.000 0.186 0.000 0.000 -0.173 0.089 -0.128 -0.134 -0.134 -0.174 -0.174 0.000 -0.330 0.000 -0.131 -0.131 0.000 0.000 -0.281 -0.281 -0.256 -0.256 0.232 0.232 0.617 0.617 -0.134 0.218 0.000 0.000 -0.263 -0.263 -0.123 -0.123 0.164 -0.351 0.575 0.000 0.211 0.211 0.000 0.000 0.186 0.000 0.000 -0.173 9.81482180 13.86919899 4.21109009 10.18115437 4.97783400 12.01124987 4.91469845 0.66675659 9.96444961 8.40373468 6.52475012 9.33137045 4.29125728 10.17324189 9.34037266 3.98869377 9.62966498 9.58463823 7.71116310 8.54737309 9.83442965 7.36720854 12.72780261 2.42521758 7.79605194 10.40542434 3.83669169 NA 10.82790094 4.03600213 12.92425508 12.16295703 8.01254409 9.66394852 9.73285816 11.46847737 3.32974074 2.88916200 0.08174865 7.05335032 9.24167790 10.12209624 6.60536839 5.52475012 9.70706780 6.87622224 9.73912492 4.93978605 10.32498056 5.08180829 12.30656190 4.43935718 5.92729679 9.94476930 6.35727927 9.94599272 9.31182686 8.79261300 11.79905451 4.80972826 13.34096129 1.40375854 10.72295512 NA 10.42388119 8.27409949 7.45684557 8.20592762 11.735970 9.829999 8.390146 12.439084 9.839197 11.268849 5.012542 11.041808 8.935116 9.935116 13.746198 11.184110 9.015497 8.061946 5.474124 7.651662 10.927689 10.948313 3.889162 8.698355 8.166615 9.298552 9.751321 7.979652 7.718431 10.234091 10.505973 7.474124 8.927296 9.482291 11.943087 10.057654 7.711163 9.548393 9.041808 10.729715 11.558284 8.970550 9.893181 10.432193 11.934336 12.686244 10.886744 9.012544 NA 10.197188 10.882706 10.177863 6.740018 10.796481 9.897990 7.678406 13.917808 9.916278 10.585632 12.987664 11.345076 9.423881 5.104173 TCGA-AC-A8OR 75 0 NA 40 breast stage ia t1c n0 (i-) mx female 2013 NA NA mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.81805165 8.88516586 11.46610267 9.23427306 8.54503319 9.12106256 10.98279070 9.72594203 10.46811692 13.54711886 11.41193590 10.41272046 -0.01727104 12.01638579 1.56774013 10.85431098 7.70388973 7.97147515 9.96293027 13.17762450 2.88968769 13.98349498 6.27741202 10.18449814 9.88063609 8.69014992 0.56774013 9.45039617 9.07554787 2.88968769 8.28885224 9.52775516 NA 2.56776446 9.52678912 9.95505251 9.76415039 10.44835711 8.74267895 10.95971278 -0.01727104 11.80237108 15.11817936 6.43828287 11.05224049 11.15709223 10.74890547 5.73767865 -1.01712504 8.22834348 9.31258713 -0.01727104 10.84504063 3.07025192 3.88967796 4.76414973 9.88817778 11.70410357 10.35511166 11.09945959 12.59899492 8.23545615 10.48760975 10.52420201 10.52437138 11.12138251 4.91352614 10.86313950 12.95343590 NA 10.46559865 8.51026769 3.85955218 5.28657070 11.16611593 10.25133269 10.82120676 8.94713165 -1.01712504 3.93698650 13.36669746 12.73245068 10.06693478 9.29907222 -0.00013862 -0.00013862 -0.00013862 0.00600720 0.01544700 0.02132300 -0.02370900 -0.00387790 -0.88225000 0.00291330 0.00291330 0.00291330 -0.00415460 -0.00415460 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 0.01126100 -0.00609040 -0.02164700 -0.03708500 -0.03708500 -0.02794500 -0.04305900 -0.04305900 -0.04305900 -0.03163200 -0.04457700 -0.00013862 0.00000000 0.00979720 -0.03774700 0.02132300 0.00889200 0.00889200 -0.00387790 -0.88225000 -0.93378000 -0.01560400 0.00805670 0.00291330 0.00624810 0.00319100 0.00319100 -0.02134000 -0.00415460 -0.02671400 -0.01659900 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 0.00000000 0.01126100 -0.00609040 -0.02164700 -0.02949900 -0.03708500 -0.03708500 -0.00360110 -0.04305900 -0.04305900 -0.03163200 0.00917050 -0.05792500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.88365747 11.63406669 7.81251363 10.40222429 3.13254394 10.57571489 1.30474466 NA 8.92383821 6.41741880 1.30474466 6.48263696 1.56774013 9.99261932 9.60575766 1.30474466 2.79014646 9.06759919 11.37618119 9.35238800 10.11502049 7.47063041 11.14612587 3.44222695 10.80973638 10.30133351 0.56774013 -1.01712504 10.42262155 3.23072563 13.34685696 12.60518576 6.65521585 9.45548155 7.90165374 9.64812655 1.98280196 1.30474466 -1.01712504 3.79014646 8.73934689 10.30584550 8.91204922 -1.01712504 8.90772201 8.59381537 10.49553118 7.53353765 9.51806612 NA 9.97997016 NA 9.26240121 9.19543299 7.46865988 -1.01712504 9.67278862 7.63024892 5.26819108 -0.01727104 13.93548646 NA 10.72341479 NA 9.68236313 2.68322483 7.22596510 9.63384240 13.214503 3.683225 8.550747 12.016386 10.284287 10.155218 13.177624 12.563874 8.869707 10.142031 12.080329 12.539536 8.228343 9.114648 1.982802 7.096533 11.511245 11.04348662 7.62664720 8.97147544 8.54503319 7.61578558 10.22888998 6.97714366 6.35782996 11.41193590 6.20195921 NA 10.82396187 6.73887995 12.78298284 10.21521166 8.24723352 9.96364434 10.55691112 1.98280196 11.84775836 9.76415039 10.49849053 10.31370762 10.82984805 9.65698306 10.56210664 9.24253391 NA 9.64439061 -0.01727104 10.84504063 7.49849023 10.72046060 9.88817778 6.65521585 14.71442715 10.09718372 9.73014454 12.60724350 10.65698297 9.31370751 NA TCGA-AC-A8OS 71 0 NA 70 breast stage iia t2 n0 (i-) mx female 2013 NA NA infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.931822 9.755480 12.127523 9.700214 7.519591 9.330886 11.715926 9.609894 9.855943 10.304586 10.777656 10.206159 3.134155 12.294158 3.567119 9.461488 6.606648 8.614748 11.264474 12.627015 1.619601 12.953940 8.223743 9.343857 10.761329 5.116011 -1.187707 11.813366 8.614748 5.204552 8.312078 7.187272 -1.187707 5.484657 10.841519 9.860038 9.265503 12.420372 10.217906 12.621397 6.246860 11.869039 14.808882 9.231013 10.611894 10.926951 10.500920 5.382086 3.719118 8.665542 13.173491 1.134155 10.768608 5.540151 6.731095 5.079020 10.213112 11.829389 10.173628 12.858845 13.203879 7.221623 10.003291 10.076557 11.127382 11.756578 5.041050 11.936515 9.827647 -1.187707 10.429240 8.688749 4.902238 5.238496 9.854576 10.311580 10.094162 9.517000 4.567119 9.682597 13.507243 12.137257 10.304085 9.712344 0.00875280 0.00875280 0.00875280 0.00152550 -0.00598630 -0.01078400 0.00048022 -0.00533010 -0.00533010 -0.00193990 -0.00193990 -0.00193990 0.00917050 0.00853810 0.00479420 0.00479420 0.00479420 0.00000000 0.00000000 -0.00733390 0.00819590 0.02373700 -0.46834000 -0.46834000 -0.46834000 0.02791900 0.51054000 0.51054000 0.02946600 0.00875280 0.00875280 0.00277450 -0.00304750 -0.01078400 -0.01078400 0.01433000 -0.01023200 0.01126100 -0.00533010 -0.00166290 0.52731000 0.46732000 -0.00193990 0.01223700 0.01046500 0.01046500 0.01558700 0.00853810 0.00853810 0.02651400 0.00479420 0.00479420 0.00479420 0.00000000 0.00000000 0.00000000 -0.00733390 0.00819590 0.02637300 -0.48081000 -0.46834000 -0.46834000 -0.47300000 0.02791900 0.51054000 0.02946600 0.01964300 0.04726800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 0.000 9.4397661 13.2358734 6.0119048 10.6058355 4.9617761 11.2361360 4.8122312 1.6196008 8.8783213 8.1894426 NA 8.3162965 4.6451194 9.3706530 10.0542153 3.6702172 10.7351882 9.0987901 11.7529129 9.9318219 10.0312797 8.9733642 11.6921983 3.8996977 9.6244095 10.1302100 6.0601598 NA 10.5004826 4.2716647 12.7538301 11.8983685 8.5637763 9.8977047 8.9517836 9.6098938 3.7191177 0.3971458 1.3972006 3.4560833 8.7664285 9.8456553 10.3450752 6.7547472 9.2227048 7.8863739 9.5520129 5.1697847 8.9908970 NA 12.6461106 4.8566272 5.4560899 9.4762972 5.2110628 6.0314018 9.9581644 9.3357943 7.6131323 -1.1877072 13.6037513 1.6196008 10.3372636 NA 7.4632840 7.4488572 7.2468603 8.6514360 12.775920 5.221622 8.638781 12.294158 10.445682 10.031401 12.627015 12.362618 9.095529 10.497743 12.392020 9.789512 8.665542 7.663981 1.812252 6.682597 11.006681 11.449989 6.498733 8.740010 9.002057 7.204550 10.309221 8.171982 8.799496 10.777656 6.587020 1.619601 4.982159 7.322957 10.979023 10.941837 7.083695 9.077847 11.746845 6.772234 12.328080 9.265503 10.223743 9.921410 11.400010 10.834947 10.672155 9.303083 NA 10.110404 7.182920 10.768608 7.259316 11.137819 10.213112 7.456088 13.893921 10.119433 10.672155 12.202401 10.913880 10.251544 2.134155 TCGA-AN-A03X 74 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 5.548757e-07 2.080784e-07 9.124444 10.033421 11.077948 9.593288 8.339989 8.661917 8.451967 9.273145 10.911160 12.594181 11.000111 10.183403 NA 13.071014 3.158660 9.489576 7.613399 7.790096 7.764933 12.332337 2.936270 13.748244 4.905895 10.126092 9.702244 2.351317 NA 9.904934 11.870695 2.673240 7.501051 6.752184 NA 4.521227 9.709956 10.814318 10.461135 8.608692 9.503589 10.629754 3.051738 9.531214 15.199438 7.313160 9.025497 11.468623 10.796837 4.521227 6.459828 8.620431 10.648794 NA 11.203444 6.691154 5.560758 2.521227 9.506123 11.377828 10.182612 12.480426 12.163883 9.121142 10.563193 9.430789 11.321410 10.619846 6.106191 11.065121 10.628592 NA 10.148966 9.166688 1.936252 5.106193 10.141653 9.265690 9.116176 9.708856 NA 8.483162 13.586720 11.146532 9.650513 9.572892 -0.53489000 0.76240000 0.76389000 0.00694350 0.00083195 -0.00041585 0.01265500 0.00000000 0.00000000 0.64098000 0.64098000 0.64098000 0.00124810 0.00124810 0.00221930 2.00970000 2.84000000 0.01950300 0.00298490 -0.54088000 0.01274300 0.01321300 0.02006300 0.02006300 0.02006300 -0.00567570 -0.00567570 -0.00567570 0.43948000 -0.51764000 -0.53489000 -0.01285100 0.00694350 -0.00041585 -0.00041585 0.00882440 0.00882440 0.00000000 0.00000000 0.00000000 -0.00584080 -0.03199100 0.87767000 -0.47976000 -0.47604000 -0.47604000 -0.46834000 0.00124810 0.00124810 0.00499690 -0.03817000 -0.53774000 -0.53774000 0.01950300 0.00298490 0.00298490 -0.54088000 0.00851360 0.01321300 -0.52256000 0.02006300 0.02006300 -0.48806000 -0.00567570 -0.00567570 0.44901000 0.48923000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 0.000 9.665321 14.967020 8.668717 10.357631 1.936252 10.363929 NA NA 8.122794 9.065550 NA 8.079225 4.874866 10.014863 8.493412 2.158660 7.686695 9.114517 11.982027 10.700586 8.435767 6.305500 10.649367 NA 8.002356 10.143281 2.351317 NA 10.370200 NA 13.354559 11.625100 8.745767 10.368809 8.627429 9.788016 5.459828 NA NA 3.743623 8.820946 9.711054 11.028584 2.810731 7.152205 8.119489 10.226286 5.905892 9.527478 2.158660 11.302225 3.995159 3.874866 9.651874 6.585403 NA 9.417394 8.139207 5.580124 NA 13.683901 NA 10.135121 NA 7.299671 2.521227 8.112856 8.106192 13.573195 3.874866 8.116176 13.071014 8.599232 10.567444 12.332337 11.435448 10.330730 10.018416 13.208314 11.529347 8.620431 8.488296 NA 6.501052 11.266437 10.617505 5.305500 8.760695 8.395699 7.119489 9.296646 5.655086 6.521230 11.000111 8.568050 4.395700 3.874866 4.088447 11.113687 9.706656 8.203053 8.203053 11.747374 3.743623 10.558148 10.461135 10.335011 10.083472 11.222825 10.010408 10.047403 8.218583 6.608692 7.784556 2.351317 11.203444 9.359733 9.265690 9.506123 5.599231 13.219645 9.715439 9.267184 12.395699 10.370200 8.359733 2.521227 TCGA-AN-A03Y 66 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 1 1 NA NA NA 1 1 1 4 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 9.9228873 9.8884975 11.4663732 8.2293341 8.7049131 8.5388427 9.5284111 9.2310505 10.6193596 8.6482307 11.6242662 10.6015565 4.5374576 12.2248185 2.2155233 7.7511028 5.1149999 8.4736412 7.0149344 13.4118939 1.9745293 14.5174860 1.6849982 10.2382674 11.9714429 3.2699757 1.1000357 11.3908378 11.7042953 3.4219773 8.4007847 5.7147620 -0.4849941 2.9074099 9.2042129 9.9068691 10.0099441 11.4266677 9.8901279 10.4671016 2.4219907 11.2026829 14.3408423 6.1921744 9.6294816 11.5250920 10.8855035 4.3479774 3.2699757 8.4561363 11.5445483 NA 10.0624651 4.3224402 5.4692836 4.1298023 10.2133591 12.0320196 11.2968580 11.3078788 12.0550954 9.2276155 11.2809961 10.3568219 10.6353264 10.6642005 5.0228827 11.5464451 12.0737484 NA 10.2011512 10.6607023 4.3979740 5.3730705 11.5381498 10.9665572 10.4231058 10.8429218 7.3605785 9.1214936 11.9718279 11.0564272 10.6884533 8.8879535 0.4101400 1.2668000 2.7559000 0.3805800 0.3805800 -0.0751920 0.9196900 0.4146500 0.3675800 -0.5317300 3.6569000 3.4368000 -0.0416050 -0.0416050 -0.0539970 3.6569000 3.6569000 0.3898400 0.3898400 0.3949800 -0.0395100 -0.0031662 0.0050167 0.0050167 -0.0146400 0.4473400 0.4473400 0.4424600 0.4708600 -0.4683200 -0.5322400 -0.4853200 0.3805800 -0.0751920 -0.1008600 0.8120900 0.8302200 0.4146500 0.3490600 0.3675800 -0.0583080 -0.0753260 -0.5531100 -0.5512800 -0.5512800 -0.5157700 -0.5157700 -0.0416050 0.0000000 -0.0539970 -0.5290800 -0.5464700 -0.5465500 0.3898400 0.3898400 0.3898400 0.3624000 -0.0395100 -0.0031662 -0.4870000 0.0050167 0.0050167 0.3755200 0.4473400 0.4473400 0.4708600 0.3699500 -0.0411350 0.000 0.000 0.000 -0.480 0.390 0.390 0.362 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 -0.481 0.627 -0.516 -0.516 0.159 0.159 0.000 0.000 0.000 -0.480 0.390 0.390 0.362 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 -0.481 0.627 -0.516 -0.516 0.159 0.159 8.5932395 11.7573695 7.4309676 9.8971720 3.9060343 11.1967662 1.5151069 NA 9.3637114 8.6584718 0.5151069 6.9202302 2.3224474 10.0995814 9.9806549 1.5151069 7.2964482 9.0619830 9.2033387 10.2081398 8.9767726 7.5892302 10.1853021 1.3224474 9.8085601 9.5059016 0.1000357 NA 10.8120047 2.3224474 13.0040583 12.0508499 7.0887352 10.1052077 8.4721904 10.1122100 4.4458260 1.9745293 -1.4847922 8.7853838 9.5778093 9.6346782 8.4007847 3.2699757 8.9781427 6.6648355 10.5767972 5.1589429 9.1777569 -0.4849941 10.4601665 2.9074099 3.3730635 9.7925387 5.7268803 3.9074099 9.1857447 8.1607468 6.2832736 NA 14.9009678 -1.4847922 10.2906988 NA 7.0696775 4.9580306 8.2749768 7.3637116 15.579519 5.613122 7.692508 12.224819 10.292960 11.908881 13.411894 11.308895 13.545989 10.736676 12.600644 12.640663 8.456136 10.932941 NA 6.809709 10.910890 10.415201 8.314370 8.079238 9.613779 8.994869 9.358711 7.069677 5.054249 11.624266 5.581176 7.607846 7.984731 8.050150 8.973495 8.736676 9.567656 8.879223 11.843202 5.966299 12.624958 10.009944 10.141710 9.881957 11.292344 9.839832 10.323248 7.928716 1.100036 8.871562 5.613122 10.062465 5.445826 10.315179 10.213359 7.357439 14.035216 10.212491 9.826837 13.197699 11.252758 9.446565 1.322447 TCGA-AN-A041 29 0 NA 7 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 10.406104747 9.920536717 12.076057014 10.242168270 8.543704663 9.609563836 10.167501443 10.524321915 9.667844238 15.145376222 9.694680520 11.301631313 0.994217647 14.154164612 2.801593262 7.982925145 5.860488606 8.751352914 11.347019862 12.988829890 2.109728291 13.565005645 0.731183242 9.002669333 11.331676781 8.898122475 1.409255147 9.120084656 8.761321513 2.868706517 8.345916143 7.448197268 -0.005782353 5.328139932 10.055386837 10.088318392 9.271915608 10.142717329 9.557119213 11.693090075 2.316174712 11.208964606 15.257534388 8.343839056 9.216633105 11.365109732 11.221856665 5.081701790 7.584204135 9.477384696 10.438220274 -0.005782353 11.343153285 5.420505982 4.801593262 4.363472483 11.035899887 11.816545990 9.713058928 12.611478589 13.197792658 8.721026710 11.212198453 11.192896524 11.472504779 11.284451611 5.190638563 12.435888133 8.816545950 NA 10.295736912 10.739634983 3.063485685 4.340013855 10.879174352 11.098621085 10.832919437 9.919547908 1.731226696 8.474021038 12.177979470 10.561563091 9.897620566 9.736269326 -0.296690 0.609240 0.713670 -0.201310 0.264110 -0.268480 -0.308630 0.201280 -0.656920 -0.427630 -0.427630 1.395100 0.031657 0.031657 -0.288200 -0.069408 -0.679080 0.029997 0.059570 0.848190 0.056859 -0.024466 -0.682460 0.887340 0.958660 -0.354940 -0.198070 -0.198070 0.108830 -0.324560 -0.296690 0.011739 -0.201310 -0.288630 -0.249890 -0.289310 -0.281630 0.201280 -0.656920 -0.656920 0.058000 0.058000 -0.029389 -0.298560 -0.292910 -0.324230 -0.313020 0.031657 0.045910 -0.320100 -0.069408 -0.679080 -0.679080 0.059570 0.059570 0.059570 0.848190 0.056859 -0.069007 -0.282700 -0.682460 0.958660 -0.448410 -0.329080 -0.198070 0.505330 0.041377 -0.695910 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.268 -0.268 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 0.000 -0.168 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.268 -0.268 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 0.000 -0.168 8.6089504 14.2911330 6.2980222 10.2097737 3.2166256 11.2045062 1.7312267 -0.5907449 8.5792032 7.9867073 NA 8.3031108 0.4092551 10.6245079 9.2796428 2.4967435 7.5741848 10.0922729 6.2796422 9.7368310 10.1686879 8.8165460 12.0012680 3.0531287 9.4260865 9.5621968 2.2166411 4.9791336 11.6622393 0.7311832 11.8121570 12.2045062 8.7745071 9.8202596 7.7491279 9.2318490 5.3865592 1.9942539 0.4092551 6.5437047 8.4134989 9.3612913 9.5647289 4.1097199 8.1468298 6.0091904 9.7491283 6.1439872 10.4519636 NA 10.1951394 2.6572055 5.1097199 9.5088759 5.4498420 3.6572055 9.3605629 8.1939131 5.4536723 -0.5907449 13.3405698 0.4092551 10.7452268 NA 7.7864885 5.5488281 7.7107748 9.2719156 13.148079 5.852221 8.479399 14.154165 11.087399 10.129950 12.988830 13.740790 8.176651 11.323663 12.826537 10.425042 9.477385 9.063914 NA 8.237415 12.857395 10.9696111 6.5488296 8.8101577 9.4399453 9.7441101 10.4878794 5.9406601 10.2429590 9.6946805 6.6807407 3.6946796 8.0184567 7.7785266 11.5035209 9.8542931 7.6643065 9.0513300 11.6350882 5.1641668 11.4674865 9.2719156 10.9096222 10.0409101 11.6744537 9.8589428 10.4550379 9.2942118 NA 9.8664129 5.4753670 11.3431533 8.1422934 10.2210543 11.0358999 7.4260869 13.3504634 9.7107744 9.6338829 12.2126021 10.0781632 9.9051332 -0.5907449 TCGA-AN-A046 68 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA NA NA 1 4 3 1 NA NA 0 7 0 7 0 0 0 0 0 4 0 0 4 4 0 0 0 0 0 0 0 4 0 0 0 5 4 7 0 7 4 0 0 5 0 1 4 0 4 0 4 0 0 4 0 0 0 0 4 7 7 0 0 0 0 0 0 7 0 7 4 0 4 4 0 0 0 0 0 0 4 4 0 4 0 0 0 0 5 7 0 4 7 7 0 5 0 0 4 0 4 0 4 0 4 0 0 0 0 7 0 0 5 4 0 0 0 0 0 4 4 4 4 0 4 0 0 0 4 0 4 1 0 0 4 0 0 0 7 0 0 0 0 0 5 7 0 0 4 7 7 0 0 5 4 7 0 1 4 0 0 7 4 0 4 0 0 0 4 4 0 0 0 0 0 4 0 0.0001464872 3.249491e-05 10.5425294 9.6969477 11.8576289 8.3687535 8.1224776 9.3521324 10.7464387 9.7230370 9.7486628 13.0174272 10.3666863 10.4685095 0.1838358 12.9089604 3.2427702 10.0992597 6.9298324 8.0397849 8.4830862 13.1015611 2.1838676 13.3129465 2.4062645 9.4110929 11.1580538 8.7087463 -1.4012537 10.4444058 11.8468432 0.1838358 7.2606938 6.3268357 -0.4010632 4.1535054 9.8732938 9.6890281 9.5428957 10.2053209 9.7763353 11.3261980 2.6863885 11.9522004 15.1631247 7.3514305 9.9728684 9.7178568 10.1126433 3.8843146 4.4815573 8.3917059 10.0578349 NA 10.8920999 5.1838795 6.9782940 5.4444053 9.6350894 12.2956659 10.2117842 12.2496309 12.9943829 7.4631017 10.9183056 10.3438673 10.9429341 11.1368621 4.5761956 13.1794687 10.8068451 0.5989368 10.6636584 8.9782940 3.8087557 6.0827324 10.4773499 9.9772105 10.5370250 9.9723246 2.0583511 9.1429142 12.4562164 11.6665181 10.1390438 8.9531651 -0.1966300 -0.1966300 0.3752700 0.0027051 0.0027051 -0.1632600 0.0137020 0.0102810 0.0025663 0.0018723 0.0018723 -0.0018543 0.0092521 0.0000000 0.0025663 0.0025663 0.0025663 -0.0017321 -0.0017321 -0.1270000 0.0038159 0.0152380 -0.5272100 -0.2406400 -0.2406400 0.0333380 0.0333380 0.0333380 0.0212530 -0.2265600 -0.1966300 -0.0293790 0.0027051 -0.1632600 -0.1632600 -0.0027617 -0.0027617 0.0110510 0.0025663 0.0025663 0.0038159 0.0127250 0.0018723 -0.0171250 -0.0171250 -0.0140220 -0.0140220 0.0000000 0.0000000 0.0025663 0.0025663 0.0025663 0.0025663 -0.0017321 0.0146790 0.0146790 -0.1275900 0.0038159 0.0152380 -0.5235300 -0.5272100 -0.2406400 0.0031216 0.0333380 0.0333380 0.0092401 -0.0691310 0.0343250 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4022395 13.2389346 4.5531147 9.6837242 3.5058020 11.5879553 2.0583511 -0.4010632 8.2941442 7.6916730 NA 7.2461943 3.5531147 10.4246696 9.3445900 2.4062645 8.4286386 8.8083690 7.9564679 9.8946847 10.4235563 7.6157238 10.4518353 1.6778465 9.5177790 10.0345859 6.0746489 NA 10.5614503 2.5058147 13.6785255 12.3810949 7.8866282 9.5589177 9.2418700 9.6508044 1.7688407 1.4062645 0.1838358 2.5989130 8.2783960 10.6750632 8.4412660 3.4062645 9.2232451 5.7688407 9.8633584 7.3769927 9.2291829 NA 13.3529159 1.4062645 5.2136272 10.0097803 7.4724520 2.9912270 9.0786960 8.3654445 6.9432111 1.5989368 14.6106889 1.1838993 10.5340808 NA 7.9630504 4.7688407 7.7688407 9.4262585 12.6067787 4.1224739 8.9095286 12.9089604 10.2924026 11.3880417 13.1015611 11.8120199 8.9997951 10.5340808 13.6631532 11.4931651 8.3917059 8.3900787 -0.4010632 7.3302348 11.0985125 11.471783 8.141948 9.145810 9.146774 7.920843 10.789929 7.888934 8.375349 10.366686 5.058347 2.299362 4.973956 7.138191 10.797054 11.151104 7.978294 9.705479 11.239838 6.558918 11.019571 9.542896 10.974770 10.434966 10.961955 9.508059 10.614331 9.072621 5.469280 9.470983 5.367098 10.892100 6.832536 11.514422 9.635089 7.861011 14.593490 10.086756 10.467738 12.572523 10.708420 9.438907 1.768841 TCGA-AN-A049 62 0 NA 19 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 3 2 1 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 10.5729849 10.2045606 11.3927231 9.4170624 9.4754147 8.7881287 9.7874308 9.2749500 9.6544570 12.7221103 10.6613287 10.4421067 -1.2260037 13.9080129 3.5289963 9.0005203 4.7048443 8.4553465 9.8708233 12.9317709 2.5814718 13.6112926 3.7283015 10.0909553 11.0068289 7.5910914 NA 10.0190665 11.0615319 0.7740807 7.1491476 7.6195979 -1.2260037 2.9440338 10.0807395 10.6394548 10.8263365 9.8642205 9.7684616 10.3425393 1.0960594 11.5491010 14.9104184 8.0553893 9.8401839 11.6630416 11.0770326 4.0960341 3.0220304 10.0727436 11.1344066 -1.2260037 11.5816643 5.3740205 5.9339786 5.0595110 10.4771466 11.5978734 10.7195520 12.2332836 12.9206768 8.5701479 10.8361543 10.2260970 10.9771502 10.6944610 4.9639318 13.4193725 8.3665653 -1.2260037 10.5377355 9.3515369 2.5711186 6.0314967 10.9932767 10.3562501 10.4170624 10.5591518 2.2335507 6.8930491 12.3035387 11.1036242 9.6742202 10.3185897 0.0107030 0.0000000 0.0352420 0.6470800 1.3340000 -0.7115900 -0.0270630 -0.0152630 -0.0152630 -0.6851500 -0.6851500 1.2985000 -0.6908500 0.0178240 0.0085380 0.6732600 0.6732600 0.0165650 -0.0108820 0.0296060 0.0171240 -0.6797600 0.0562280 1.9978000 0.7040100 0.0338310 0.0338310 0.0228170 0.0384890 -0.5613700 0.0000000 -0.6867000 -0.7013300 -0.0131270 -0.7172200 -0.0237030 -0.0237030 -0.0152630 -0.0152630 0.0047190 0.6490500 -0.7005500 -0.6851500 -0.6038100 -0.6038100 0.0249690 -0.6511800 0.0178240 0.0178240 0.0085380 0.6732600 -0.6870600 -0.6870600 -0.6076700 -0.0108820 0.0298880 -0.0008316 0.0171240 0.0552300 -0.6541700 0.0562280 0.0125160 0.0705300 0.0338310 0.0228170 0.0384890 -0.1316000 -0.6338700 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 0.000 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 0.000 8.3979894 13.9224655 6.0778881 10.1426146 3.3888232 10.6375201 2.8615783 NA 7.7107458 8.1642769 -0.2258349 7.8535928 2.7741018 11.1483326 9.2076935 1.0960594 8.6974357 9.1338576 10.5447721 10.7867327 9.7832229 7.5814627 10.9371288 2.4745399 7.1664252 9.6344192 2.5814718 NA 11.0505234 1.3590713 12.1111725 12.3009741 7.9339798 10.2129000 12.0027766 9.5587429 3.2335353 1.5814477 NA 2.0960257 9.2528778 10.3472820 9.7434946 5.2659619 8.7610878 7.5750082 9.5636417 6.0220348 9.8401973 NA 10.9248075 1.9440338 3.7741123 8.8073659 5.7625667 3.9440338 10.6711973 8.3851329 6.6506253 1.9440338 13.7598167 -1.2260037 10.3758789 NA 7.8130269 4.7283069 7.6258571 8.8239566 13.4949717 5.7741071 7.5620104 13.9080129 10.3739420 10.9750067 12.9317709 12.0288415 9.8609079 11.1696423 12.8759197 10.8638896 10.0727436 8.7726986 0.3590713 8.0869912 10.7930038 10.496916 6.625858 8.548895 8.670441 8.988427 10.343356 7.036203 8.233540 10.661329 6.439444 1.359071 6.050232 7.488731 10.493925 9.532331 8.587889 9.551363 13.116808 4.882633 12.157721 10.826337 10.465852 10.644858 11.958983 9.455347 10.255403 8.691480 NA 9.088725 5.233539 11.581664 6.861571 10.513467 10.477147 7.644473 13.682923 10.203515 9.747088 13.008102 10.125600 9.635971 1.944034 TCGA-AN-A04A 36 0 NA 90 breast stage iiia t2 n2 m0 female 2008 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino 3 2 1 NA 3 5 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 9.95462804 9.87778458 11.63559239 9.24256035 7.72440880 8.27063873 9.75220500 10.48635619 10.80482920 14.51228970 10.19250008 11.41322643 0.07093882 11.92479588 3.48600637 9.46328404 5.72440744 8.41969478 7.30937085 12.70123365 2.07097316 13.60693035 3.34399047 9.13166253 10.80369928 8.44310600 2.29337048 10.51385479 11.80270982 2.18643717 7.04442472 7.71482248 2.48599349 4.46328241 9.28204358 10.44201705 9.68751531 10.98560083 9.73689453 11.21264794 10.56582210 11.04920028 15.80110935 6.90478393 9.77947560 11.06814599 10.91750165 4.07096457 4.24089434 9.13076154 10.66030553 NA 11.42888502 5.88688420 4.61528681 4.87832317 10.22536279 12.08765875 10.46292612 12.06201591 12.75381483 7.80341692 10.87912632 10.36597013 11.07401586 10.91697920 3.80793188 11.79718467 11.88434691 NA 10.51494607 8.78406649 1.29542917 4.84355680 11.12172213 10.05491019 9.94850624 9.56148309 1.07093882 7.35019046 12.19260795 11.27145649 9.59322116 10.13031096 -0.4089300 0.4042700 0.4042700 0.0102200 0.0273570 0.0098669 0.0175440 0.9462900 -0.4155300 -0.4386400 -0.4386400 1.3871000 -0.0243730 -0.0267960 -0.4200300 -0.4200300 -0.4200300 -0.4402700 0.0038854 -0.0313590 0.4267100 3.1996000 -0.4691800 -0.4691800 1.7500000 -0.4342000 -0.0635690 -0.0635690 0.4112900 -0.4658900 -0.4089300 -0.0364010 0.0102200 -0.4498600 0.0098669 0.0175440 0.0175440 -0.8791400 -0.4155300 -0.0395290 0.0139470 -0.0131270 -0.8988600 -0.4335500 -0.4335500 -0.4126700 0.3320500 -0.0267960 -0.0494100 -0.4200300 -0.4200300 -0.4200300 -0.4661300 -0.4402700 0.0038854 0.0038854 -0.4178400 0.3896500 -0.4159700 0.4248600 -0.4691800 -0.4691800 -0.4791300 -0.0183530 -0.0635690 0.7912300 -0.3980800 0.0657990 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 -0.402 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 -0.457 0.000 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 -0.402 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 -0.457 0.000 8.83251790 14.57835031 9.69910825 9.93412030 2.07097316 10.05823057 -0.51395501 1.65594710 8.09518284 9.13974472 NA 9.88367870 0.80793188 10.61721793 8.60624196 1.48599349 7.09333410 9.89220901 10.14421555 9.33462704 9.00991873 7.15488898 11.59811770 2.07097316 8.07096672 9.70819517 3.91226663 NA 11.60640392 1.07093882 12.82104538 12.12172213 8.62043026 9.53857211 8.01348124 9.66342361 4.55209421 1.48599349 -1.51416103 0.07093882 8.18470875 9.02030689 9.61721784 3.65592421 7.16977070 6.17949115 10.01005599 9.02225128 9.40188342 -0.51395501 9.70274982 2.87831336 7.58929160 9.32897510 6.91837908 4.29335577 9.77832572 7.48318375 8.96275028 2.39289439 14.26420951 -1.51416103 11.34028803 NA 8.07846093 5.04059439 8.77487006 8.52492286 13.148617 5.903855 8.410816 11.924796 10.075655 10.645875 12.701234 14.610751 8.711211 10.623594 13.228156 11.596487 9.130762 9.014458 -0.513955 7.916456 11.093103 11.622194 7.702750 8.597140 9.727987 7.729178 10.966582 5.852326 9.768513 10.192500 5.920632 3.530395 7.179491 6.785670 12.034344 10.099333 9.312235 9.116271 10.614643 4.343983 9.683976 9.687515 10.994542 9.378547 10.771984 9.769092 11.027827 9.647136 -1.514161 9.098725 5.714822 11.428885 7.933087 10.790355 10.225363 7.104389 14.279430 10.101174 9.932570 12.580659 10.202823 9.493732 1.807932 TCGA-AN-A04C 51 0 NA 54 breast stage iib t2 n1 m0 female 2008 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 6 3 4 NA NA NA 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1.28315e-06 4.855162e-07 9.974202 9.036916 11.875384 7.631265 9.283459 9.277700 10.134373 10.138918 11.170119 14.096375 9.355529 10.897146 3.205001 17.290983 3.789959 8.298977 4.694384 9.542108 3.205001 12.398810 NA 11.127299 6.476105 9.326335 11.455299 7.305461 2.411453 8.057230 11.398052 1.311910 8.623502 5.780685 NA 4.337454 9.295723 10.250235 9.242653 10.937885 9.920302 10.736682 12.575688 11.826771 14.711499 6.099632 9.644751 10.105867 9.541421 4.387204 3.896882 8.486128 12.378005 -1.495329 11.108882 4.435295 6.633844 4.633844 10.265696 12.147064 9.588040 11.537812 12.890760 6.331109 11.267150 9.983836 11.251915 10.684159 2.311910 11.935405 10.081045 1.311910 10.211057 10.023214 4.240894 4.362540 11.388540 9.774272 10.810337 10.273572 1.504570 10.814605 12.900831 11.301006 10.004407 10.087643 -0.149650 0.417310 0.417310 -0.120950 -0.151950 0.242640 0.976470 0.259340 1.711000 -0.673250 -0.589020 3.656900 0.192540 0.192540 0.260750 0.260750 0.260750 0.224990 -0.519590 1.757000 -0.278940 0.036935 -0.571490 3.656900 0.297240 0.076279 0.076279 0.418140 0.251050 -0.149650 -0.149650 0.219510 -0.560670 -0.988990 0.243110 0.213300 -0.576340 0.259340 -0.194870 -1.029500 -0.136260 -0.136260 -1.021900 0.241090 -0.136780 -0.136780 -0.125210 0.192540 0.192540 -0.154520 0.260750 -0.154390 -0.154390 0.224990 -0.519590 -0.519590 -0.233980 -0.278940 0.036935 -0.489840 -0.561960 2.021100 0.227000 -0.302630 0.436650 0.228230 -0.135490 -0.017693 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 0.000 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 0.000 7.3718394 11.6060440 2.5045695 7.6744854 3.0707671 11.4795129 2.2049858 3.0281271 8.9360584 6.5157881 NA 6.7429655 5.2050014 11.1949952 9.4241688 5.3247386 8.0475924 9.7291653 9.4204401 11.8297255 7.9892423 6.6183033 10.7663618 NA 7.9903899 9.9562870 3.2050014 NA 11.8134685 NA 13.6337632 12.6403501 7.0320380 8.3054608 7.9011656 11.8150314 2.7524917 3.5489544 NA 0.8265180 9.2752245 10.2540111 10.5192786 3.7899587 9.6678519 7.3215439 9.9792806 8.0300817 10.1654480 -1.4953288 11.1009834 1.5045695 4.2324842 9.9070664 6.4529281 5.5920234 9.2669427 8.0763132 9.0658485 3.2594533 14.7605666 -0.4955321 10.8574317 2.5920144 10.2904218 6.3054599 8.5045608 8.0437196 12.110336 7.992401 9.676988 17.290983 9.946467 10.854671 12.398810 9.482556 9.238423 10.628682 12.983393 11.073942 8.486128 5.374925 4.613084 8.342188 11.858121 11.081517 6.441198 8.394825 9.447808 10.398620 10.291908 5.654307 5.905440 9.355529 6.211919 -1.495329 10.125697 8.033269 12.873613 11.134828 6.537984 9.595996 7.478975 5.337451 11.357987 9.242653 10.266112 10.837436 9.323143 9.076313 10.452563 8.122946 1.089498 9.122873 7.051455 11.108882 4.771347 11.434928 10.265696 8.229603 14.863641 10.392162 10.188433 11.805771 11.688661 9.435298 1.674506 TCGA-AN-A04D 58 0 NA 52 breast stage iib t2 n1 m0 female 2008 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 8.323135e-07 9.3706083 9.3240554 11.1846712 7.2178385 8.6996727 7.9570341 9.0749528 10.1857416 10.5649389 12.4827026 11.1014740 10.4594363 0.5257682 12.0536136 2.2038276 10.1364015 4.4892218 9.5149982 13.1963577 6.0111736 NA 4.1107057 8.7165582 9.5559990 12.0809100 2.0111736 0.7887692 6.0612383 11.9479156 1.0111378 8.8267846 5.8762419 NA 3.4892218 8.9172041 9.6405291 8.4995864 10.0710963 9.8440625 10.7286041 4.9851771 10.7646281 14.7335531 7.8368854 9.8129963 9.7376340 10.5464479 5.0986343 -1.7963603 8.8682648 11.0263884 0.5257682 7.0680033 1.7887692 3.7887797 4.6956710 6.2482122 12.5389986 10.7071464 10.5522691 12.5304577 7.4564834 10.9670299 10.6838176 10.9427543 10.4990125 3.4132691 11.9316317 11.2478701 -1.7963603 10.2213220 9.3388854 5.7531017 2.9042529 10.9497020 10.9391621 10.8517257 9.0948417 3.9042529 5.1345536 11.9333321 10.2846351 9.9607909 11.4598788 1.2989e+00 1.2886e+00 1.3976e+00 -8.2864e-01 6.8812e-01 7.0101e-01 -8.3001e-01 7.2697e-01 -4.3885e-02 9.7064e-04 9.7064e-04 1.3060e+00 6.9453e-01 1.6006e-02 -5.5389e-05 1.1121e-02 1.1121e-02 -1.5191e-02 6.1552e-01 1.9201e+00 -1.6967e-02 3.3127e-02 -7.6962e-01 5.0819e-02 7.8080e-01 7.0817e-02 7.0817e-02 8.0745e-02 1.4207e+00 -7.4681e-01 -1.6567e-02 -7.9218e-01 -8.0003e-01 -7.9903e-01 -3.0540e-02 -8.3438e-01 -5.8862e-02 7.2697e-01 -4.3885e-02 -8.3276e-01 -1.1198e-02 -1.1198e-02 -8.2782e-01 7.1565e-01 7.1565e-01 2.3987e-02 -7.7592e-01 1.6006e-02 -7.8345e-01 2.6654e-02 1.1121e-02 3.7465e-03 2.6518e-02 -1.5191e-02 3.4395e-02 3.4395e-02 -1.2929e+00 -7.9603e-01 -7.9653e-01 7.6710e-02 -7.6962e-01 5.0819e-02 5.2749e-03 7.0817e-02 5.7653e-02 4.3157e-02 1.3868e-03 9.9870e-02 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 0.000 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 0.000 5.59613607 12.65412674 1.20382760 8.94359817 -0.03919177 12.22332145 -1.79636031 4.89032022 9.28330231 8.34208934 NA 9.25184807 7.30972644 11.07456758 9.45884622 6.47060356 3.37374564 9.89904584 6.99498017 9.85262454 8.65591456 6.32275921 10.76725223 NA 9.69917299 9.90339007 1.78876922 NA 10.78924964 1.66325352 13.11885664 12.56952489 7.12268100 9.79487232 7.67142289 10.14119136 4.29127939 1.90427213 -0.21123078 0.78876922 9.11296071 9.97241552 4.56136891 5.82586956 10.96857104 6.46591245 9.41692185 7.19533972 12.59398654 -0.79610977 13.11703426 -1.79636031 5.91117624 9.86355041 6.10546856 2.29127939 7.89730457 6.21504563 4.11070567 7.86559595 14.07104806 2.01117357 10.19958475 4.54366910 10.60149225 5.49843917 8.19108143 8.00147913 7.885056 9.378119 9.004717 12.053614 11.216091 11.652450 6.011174 9.087225 9.100771 10.086461 12.719579 9.141927 8.868265 8.991720 2.203828 8.664273 11.433087 10.657345 6.285966 9.085673 10.779120 9.294592 9.579378 3.203812 6.011174 11.101474 9.589141 NA 10.059465 10.089853 12.089228 9.706649 6.727380 9.818527 4.803728 1.663254 10.526154 8.499586 9.573415 10.564116 10.404410 9.874031 10.027185 8.614269 NA 9.737070 6.570140 7.068003 6.322759 10.281248 6.248212 7.740026 13.937813 9.520665 9.756006 11.892942 12.166804 8.729338 0.203765 TCGA-AN-A0AJ 79 0 NA 303 breast stage iib t3 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 7 3 1 NA 3 5 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.664627e-06 6.589149e-07 10.0886520 10.0142551 11.2871298 8.8472475 9.2257593 8.3800666 9.3400165 10.1169026 9.4655474 13.6016840 10.5352390 10.9391123 6.7781691 12.5113462 3.8732423 8.5600294 4.3878174 9.6215726 9.3199042 12.8885157 2.5064496 13.2250385 4.0658911 9.5783463 11.7238443 5.9796321 2.0658825 11.9598395 12.1243629 -1.7413002 9.1242663 6.5299958 -0.7415414 4.2585340 10.3624765 11.4250100 9.5554492 10.8283887 10.2988228 10.2833264 5.0267160 10.0378421 14.5408794 8.0107295 9.2988228 10.8990039 11.1794441 3.3029331 0.2585792 9.2010474 10.6267666 NA 10.6446650 5.9520190 7.1165145 6.0067266 10.2210676 12.5372002 10.4468127 11.6206138 15.0371235 6.8207751 11.0155062 10.6966179 10.9086872 10.6430470 4.9450317 12.6975198 10.8563528 -1.7413002 10.2141830 10.1223321 3.9035397 5.1040221 8.9424048 9.9589727 10.3512902 11.0437811 -0.7415414 4.9864519 11.7660799 11.7014765 10.1529719 8.6753304 -0.46312000 3.65690000 1.02140000 -0.00954260 0.41195000 0.08536500 0.39900000 0.73549000 3.65690000 -0.94445000 -0.94445000 2.30350000 0.00940730 3.65690000 0.32914000 3.65690000 -0.02315500 -0.01092200 0.40711000 -0.46982000 0.00000000 -0.26733000 -0.44674000 -0.01009400 0.97523000 1.13310000 -0.00097017 -0.00097017 3.15510000 -0.43843000 -0.46312000 -0.29449000 -0.00954260 0.69055000 2.12300000 0.39900000 0.42267000 0.73549000 0.77791000 -0.03758800 0.82177000 -0.47702000 -0.94445000 -0.52092000 -0.52092000 0.00315110 0.01698500 -0.46589000 -0.43875000 0.32914000 0.35626000 -0.47607000 -0.47067000 -0.94576000 0.00593730 -0.45854000 -0.50017000 -0.01270900 -0.24545000 -0.43333000 -0.44674000 -0.01009400 -0.02096100 -0.51208000 -0.00097017 0.22037000 0.39745000 -0.43561000 0.000 0.000 0.329 0.329 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.477 0.747 1.691 -0.488 0.000 0.697 -0.239 0.000 0.000 0.329 0.329 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.477 0.747 1.691 -0.488 0.000 0.697 -0.239 8.7302082 12.6483660 7.0234051 9.2061699 5.4082805 10.9362526 2.5064496 NA 8.5473989 8.7957514 NA 7.8270022 0.5804350 10.2479275 10.3346806 4.4082771 8.8769184 10.1851997 6.9023896 10.8872064 9.4182783 7.5276600 9.8978737 1.2585189 8.2571233 9.4624927 2.3459924 NA 11.8238731 0.5804350 12.3790139 11.6431819 7.2329475 10.0803070 8.8640125 9.6926399 4.3670565 2.4284640 NA 11.5990786 8.6324856 9.1048068 10.7084554 2.4284640 8.1852441 7.8621594 9.3631319 4.7820940 9.8690966 NA 10.3114407 3.3878174 3.7179670 9.3562953 4.9693393 5.5253203 9.7503861 8.9881538 7.7663275 -0.7415414 14.3599342 -0.7415414 10.4840417 NA 7.9502765 2.4284640 8.5983831 8.1533509 13.559519 7.094583 8.598383 12.511346 9.198112 11.504383 12.888516 11.014881 9.178886 10.757133 15.455010 11.094781 9.201047 10.381684 1.580483 8.704583 11.985709 11.229717 5.734265 8.609472 8.939771 9.763352 10.019623 7.189270 4.843497 10.535239 4.813119 1.428464 5.580462 8.750065 9.480724 10.590010 8.958105 9.655673 11.600191 6.801565 11.891293 9.555449 10.555449 10.562028 10.633844 9.246508 10.807355 8.316525 3.258534 8.879321 6.854723 10.644665 5.667923 10.648702 10.221068 7.665801 13.677769 10.326304 10.219621 12.470269 10.228639 9.308382 1.428464 TCGA-AN-A0AK 76 0 NA 224 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 NA 1 5 1 2 1 1 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 4 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 2.132803e-05 8.808651e-06 9.5854546 9.7534511 10.1272049 9.5830875 8.6471835 9.1009734 11.4551857 9.7583547 10.1031776 14.2680155 9.7743501 10.7340242 NA 13.4209700 3.9957558 8.2654960 6.0697537 8.1379958 13.2297521 13.1980713 0.3327366 13.7862741 NA 9.5719898 11.1824548 7.0424474 NA 9.2113510 10.7128893 -1.2522259 8.8379391 6.0697537 -1.2522259 4.1053764 9.2496639 10.2220396 10.0453161 8.7826255 9.8233058 11.0993180 12.8984465 10.5155972 14.3950320 7.9511990 10.0573030 11.4672154 11.5359331 3.0697537 5.4343280 8.9202540 9.4612132 NA 10.3858099 3.7020258 4.6785621 5.0146142 10.8058183 11.6277927 10.4787212 10.1347668 12.8474210 7.8112218 11.2456784 9.9899885 10.5913552 11.5743751 4.0697537 11.6919896 8.9850364 NA 10.1239520 7.9327020 1.9177373 4.5551842 11.8080159 10.5287764 10.3261992 9.6562193 -0.2522259 4.2713883 11.0043302 9.8854581 6.7701948 8.9742388 -0.3554400 0.4327700 0.3779200 0.0293250 0.0043021 -0.0662090 0.3396600 0.0365120 0.0114000 0.0886920 0.0452210 0.9027100 -0.3745900 -0.3750400 0.0294370 0.0294370 0.0127170 0.0346010 0.0209030 0.0454240 -0.3692900 -0.3498500 0.0577960 0.0577960 0.0577960 -0.3551000 0.3574300 0.3574300 0.0425900 -0.3554400 -0.3554400 0.0000000 -0.7917700 -0.4370200 -0.0927420 -0.4094000 -0.4020700 0.0365120 0.0114000 0.0114000 -0.0386620 -0.0369460 0.0886920 -0.5549800 -0.5401700 -0.1050000 -0.1050000 -0.3750400 -0.3358300 0.0523830 0.0294370 -0.8020700 -0.8020700 0.0346010 0.0209030 0.0209030 0.0329860 -0.3692900 -0.3498500 -0.7761700 0.0577960 0.0577960 -0.2315300 -0.3551000 0.3574300 0.0425900 -0.0238400 -0.3359500 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 -0.215 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 -0.215 7.2031542 11.4672154 1.9177373 8.4706341 2.9957558 11.0172455 NA NA 8.9933794 5.8031082 -0.2522259 5.7922203 1.5551781 11.5058416 9.0332289 3.7478278 5.6785649 10.0063926 8.5193162 11.7279662 9.2227594 7.5680055 9.8352895 0.8951475 3.3327938 9.0573030 4.8352875 -1.2522259 11.0823792 0.7478600 12.3850175 12.6408437 5.7136106 10.4158251 7.0742560 10.2406812 2.2072682 2.9957558 -1.2522259 1.9177373 8.8693600 10.2704082 9.9499504 0.3327366 8.7537880 7.3588516 10.9280466 5.9957536 9.9327020 -1.2522259 10.6730101 2.2072682 3.1401406 9.7828387 5.7006256 4.9572785 7.3024150 8.7729661 7.3988779 1.0697709 14.0625160 -0.2522259 10.4246652 NA 8.7293937 4.7701948 6.8771099 9.4220189 12.764388 7.959715 9.142289 13.420970 10.434327 11.006098 13.198071 12.807931 9.369878 10.641128 12.732423 10.600356 8.920254 8.308159 1.747817 7.902645 11.406038 11.5999659 5.7590546 8.4774474 10.0753793 9.8543895 10.5569315 5.0876750 9.3205269 9.7743501 7.0052147 -1.2522259 6.9957536 7.3587409 8.9838407 10.5328703 8.6274099 9.7136109 9.6312336 4.5291838 9.5310705 10.0453161 9.8751762 10.8605919 12.1332846 9.9039097 10.8202942 9.1119611 4.6304695 8.8344802 5.7812495 10.3858099 5.0146142 10.7453589 10.8058183 7.4859186 13.7042027 10.4808419 9.6441589 11.5406169 10.9766453 9.0742560 0.3327366 TCGA-AN-A0AL 41 0 NA 227 breast stage iiib t4 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.733986e-06 3.81477e-07 9.1115011 9.3038837 11.5760781 8.4472229 8.8845515 9.8185488 9.5653858 10.9239470 12.7418544 13.6761526 9.4480548 10.6429847 -1.3125809 11.3845196 1.4946716 11.9909729 5.2108953 8.6745987 11.1138617 9.2552909 -0.3125809 9.3374890 2.2722920 9.9688361 10.2895697 6.3738361 1.2723219 11.1650021 10.9888310 1.2723219 8.4736043 8.1135995 NA 6.4488861 10.2605087 10.9149507 8.7166219 9.2467119 8.7069256 10.4062957 NA 6.5265384 16.0111197 6.4701366 9.2628740 10.4101423 9.3148687 2.3877761 NA 9.2390431 10.7083148 -0.3125809 10.8793193 5.6298491 6.0623743 5.4686941 10.2481453 11.7769508 9.1364834 12.2863178 13.3958260 8.2797916 10.2638192 9.7339883 11.1879278 10.3020447 3.7747976 11.6344238 9.7055349 2.2722920 10.7276246 8.9681057 2.6293799 6.0271850 11.1582478 9.9933966 10.1716542 9.1406054 -1.3125809 6.3020448 13.1807525 11.9577762 9.3929671 10.1198767 0.1251000 0.1251000 0.5316900 -0.7291400 0.7294300 0.0063871 0.0549450 -0.6742600 -0.7445500 0.0210430 0.0210430 0.7192300 0.1404300 -0.7072000 0.3789100 0.3789100 0.3789100 1.9737000 0.6890600 1.1817000 0.0100060 2.4386000 -0.7180900 -0.7180900 0.0516720 -0.0013858 -0.0013858 -0.0013858 0.0091705 -0.7089000 0.1251000 -0.6732500 -0.7291400 -0.0423810 -0.7373100 -0.7434200 -0.7521900 0.0386300 -0.7537900 -0.0202750 0.7912300 0.0265140 0.0210430 -0.7220800 -1.2929000 0.0301720 -0.7156800 -0.7072000 -0.8003600 -0.7395000 0.3789100 0.3789100 0.3789100 -0.7226100 0.6890600 -0.0231550 -0.6106600 0.0000000 0.0086135 -0.0460410 -0.7180900 -0.7180900 -0.7515800 -0.6962200 -0.0013858 0.0091705 -0.0058140 -0.7359100 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 -0.584 -0.584 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 -0.731 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 -0.584 -0.584 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 -0.731 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 0.000 8.7694838 13.9271944 3.5942261 10.0047474 5.3877761 12.3093867 4.1467693 2.3877761 8.5912168 10.6527584 -1.3125809 8.2760495 5.5328250 11.1516253 9.3239595 -0.3125809 8.2571903 11.0143260 8.5453159 10.2380816 9.1087265 6.9209542 12.7559452 1.6873295 8.2666507 10.6978629 1.0092755 NA 10.5087102 4.6180742 12.9263366 13.2988784 8.8647544 9.7117819 10.1751749 10.0850095 2.9352711 4.2108953 NA 2.3877761 8.5343920 11.0753521 10.5783590 3.9352617 9.9905561 6.5390843 9.6781480 6.7747976 10.1072950 2.5942141 12.1655989 3.2109031 3.2722920 9.4726565 6.9123014 8.4271154 9.7138583 8.2438409 10.3843023 2.7747976 12.9746865 0.2722621 11.2814261 NA 7.2303664 5.0967257 8.3130435 9.0742750 12.099508 7.338386 9.054749 11.384520 10.250531 11.355998 9.255291 10.914349 9.435528 10.981094 12.868487 10.242883 9.239043 8.154941 3.009258 7.545316 10.898615 10.832630 5.146765 9.045986 9.081798 8.283525 9.551103 7.839620 5.785367 9.448055 3.687329 7.422045 6.726254 8.856633 11.396203 10.269947 8.549972 8.815329 9.296514 7.569978 10.026767 8.716622 10.331191 10.459649 11.695588 11.145229 10.051469 9.076428 NA 10.424045 10.025514 10.879319 7.641531 9.758797 10.248145 7.234229 13.494438 10.092476 11.542398 12.228552 10.305261 8.413553 3.687329 TCGA-AN-A0AM 56 0 NA 5 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 3 4 NA 1 5 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 3.467973e-07 8.6573871 9.3973396 11.2394397 8.7123884 10.5674304 9.3951001 9.8347679 10.1989285 11.4757347 13.6764160 10.0005863 10.5345718 5.4107040 11.4377951 3.4341612 9.9892477 6.7278946 7.7928508 10.5308365 12.2623516 -1.5199417 13.6509879 6.0649303 10.3055385 10.6808662 6.3065156 0.4799548 11.1537382 10.5574509 0.4799548 8.5270915 8.0268620 -1.5199417 4.2078850 9.9818047 9.5799728 8.9104200 9.8550070 9.0103740 9.8153578 3.4799678 11.2199591 14.8489343 7.5135555 10.4707771 10.1011036 10.1156856 4.2348538 4.3379465 8.4729061 11.8069587 NA 10.1510663 4.6697921 6.2078889 5.1804065 10.0422100 12.1371743 10.3124620 11.2210131 12.2944499 8.4771471 10.3928569 10.0858081 10.5450470 10.9559543 4.8294031 11.6805597 9.8419113 NA 10.5040684 9.0488737 2.7286607 4.6697921 11.0171860 10.3124620 13.6077604 9.3207455 1.6498913 6.6894208 12.4694508 11.4003204 9.7057775 9.1065891 -0.2274800 2.3657000 0.4819900 0.0516720 0.2090100 -0.0731370 2.0846000 -0.0673300 2.5231000 -0.3711000 -0.3711000 0.1509900 0.0224440 2.1540000 -0.0637030 -0.0637030 -0.0637030 3.6569000 3.6569000 0.2381400 0.2585500 3.6569000 -0.3799900 -0.3970800 0.5114100 0.5436500 0.1057000 0.1057000 0.6762300 -0.0760120 -0.2561200 0.0049969 -0.1961500 -0.3403300 -0.0731370 0.2581900 0.2581900 -0.0673300 1.0222000 -0.3316800 0.2152400 -0.2386300 -0.4041500 -0.2083400 -0.2083400 -0.2083400 -0.3721100 0.1203500 -0.3883900 -0.1643400 -0.0637030 -0.0637030 -0.0637030 0.1104300 -0.2968800 0.8510600 -0.0834650 -0.0441440 0.0297470 0.0062481 -0.3799900 -0.4082700 -0.1823100 -0.0778780 0.1057000 0.1212300 -0.1325100 0.1339100 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 -0.198 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 -0.198 8.2953506 13.4515560 5.3747856 9.5352499 4.2537019 10.6685564 1.0649518 NA 8.0854470 8.0872979 NA 7.3367047 6.7928501 11.3980854 9.7219507 3.2348538 4.7087887 8.5832554 9.3709918 11.9003226 9.5711318 7.3958468 9.5956614 0.4397827 8.8776421 9.8967651 3.2348538 NA 10.9597478 1.8019036 12.6002054 12.9641611 6.6845382 9.9083278 9.9156379 10.3849784 2.7278987 2.1804025 -1.5199417 5.2078889 9.3136483 10.2997474 8.2146771 0.4799548 7.8411875 7.2580449 9.5587856 6.1873263 11.2855099 3.6092467 11.9610101 3.4799678 3.9062364 9.3230485 7.3868584 5.6894222 9.0345563 7.6722606 8.6360507 3.8018933 13.8472799 -0.5199417 11.2947503 NA 8.9434918 3.9718194 7.3441539 9.0770889 12.975959 7.792851 8.696713 11.437795 10.512702 11.731894 12.262352 16.305777 8.711189 13.082716 13.849326 9.932724 8.472906 7.701555 4.287325 8.136392 10.424680 10.581615 6.513391 8.539312 8.169966 7.993695 8.513336 6.931178 8.709988 10.000586 9.557451 -1.519942 7.518887 9.334727 10.500600 10.132364 8.544710 9.463674 8.533893 6.769986 10.445939 8.910420 10.833666 10.558118 10.443225 9.729674 9.955701 8.398831 1.064952 9.045812 7.148853 10.151066 7.713587 10.071022 10.042210 7.613752 13.780356 10.694287 10.420281 12.245461 10.686371 8.496776 1.064952 TCGA-AN-A0AR 55 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 1 0 0 0 0 0 2.670339e-06 6.935946e-07 8.1323090 8.5621054 10.8873337 8.2221694 9.7995617 7.1098829 9.5265675 9.1913509 11.6672743 12.1624724 10.8506105 10.0448749 -0.4713287 11.1673446 1.9881211 8.6227602 8.4174255 9.8048069 12.8712433 8.9113066 -1.4711287 12.1321929 11.0374676 10.5513519 10.8258853 3.3866592 2.6986186 8.6280303 11.0712307 2.2291264 8.0620121 7.1098829 3.6161459 2.6986186 9.4995073 9.0344939 9.5482732 9.8889809 8.8884322 10.8598793 0.1137005 8.5907285 15.0719258 7.5827712 8.3741409 11.0087152 10.4408233 4.2011084 -0.4713287 8.5593496 9.7356968 NA 8.8347441 4.5947695 3.5730715 5.0044160 9.5510503 12.0667501 10.6582875 10.9679939 12.4074997 8.2151830 11.3633510 11.2480713 10.7332536 10.2523434 5.4475461 11.2037574 8.7694739 -1.4711287 10.5723933 9.1922405 3.1748378 3.4828741 8.4310575 10.5240963 11.1143492 8.9653941 0.5286713 8.5385110 11.7576514 11.2041985 10.2814812 9.4879600 -0.84659000 0.05850900 -0.90183000 0.02090300 0.01628600 -0.00097017 1.64700000 0.04826200 0.79491000 -0.03190500 -0.03190500 0.76178000 1.55860000 0.02482900 -0.00664320 0.03905400 1.63130000 2.17420000 -0.86137000 0.45037000 0.00388540 0.73360000 0.02174400 -0.80534000 -0.82931000 0.29867000 -0.04265200 0.01293400 -0.85979000 -0.81326000 0.03481800 -0.87424000 -0.84979000 -0.87634000 -0.87782000 0.04755200 -0.84887000 2.69360000 0.79491000 0.15338000 0.00360760 0.05067700 -0.96316000 1.47470000 1.47790000 0.84514000 0.07671000 -0.02432900 -0.08943400 -0.86955000 0.03905400 -0.02096100 -0.04780100 0.87587000 -0.00774820 -0.00512270 -0.86232000 0.15173000 -0.86024000 -0.86923000 -0.07214000 0.01796300 0.69727000 -0.82513000 0.01293400 0.04570800 -0.89312000 -0.04428000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.429 -0.855 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 -0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.429 -0.855 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 -0.220 6.6319700 12.8158898 2.9209983 10.2442155 3.1136505 11.9083316 1.6986186 4.5730776 9.8296070 7.8024782 11.3163810 6.7860709 8.6695123 11.4765020 9.9209999 2.9209983 5.8233035 9.7772030 7.1433924 10.5873507 8.3068091 7.0909254 11.7292746 1.1136338 8.4653203 10.5423541 4.3866661 NA 10.8914482 2.8506194 15.1836541 12.1833185 8.3851079 9.7048555 6.4886837 10.7405708 3.6161459 3.9549500 -1.4711287 3.3360405 10.7816435 10.4486630 5.5730776 6.0755776 8.6790645 7.8950045 11.9248858 6.2360410 11.7661912 5.9633100 12.4570158 NA 4.5730776 10.4763669 6.6875451 3.3360405 7.4082660 6.1285945 4.0832729 3.8140889 13.6907197 0.5286713 10.2186804 -1.4711287 9.8818293 3.3866592 7.9983241 10.6240795 12.994682 8.441572 9.260001 11.167345 10.327154 9.947589 8.911307 11.153021 10.319031 11.266141 12.001246 12.184772 8.559350 6.728355 5.877411 7.528682 9.040435 11.2442155 4.2835736 7.8278673 10.4204662 7.7526844 10.8080928 5.7478519 4.3615719 10.8506105 6.0600647 0.8506394 5.9633100 8.6682851 11.8293210 9.9845234 8.5994338 8.7884257 7.8301786 3.9549500 9.9399974 9.5482732 9.7789809 11.0839906 11.8198532 11.2538357 11.0394466 9.2403494 -1.4711287 10.8116174 7.3001722 8.8347441 7.0871032 11.0119944 9.5510503 7.9986903 15.6900703 9.8551119 11.2623334 11.1924629 11.4174257 9.7350863 6.9757654 TCGA-AN-A0AS 70 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 4 white not hispanic or latino 1 3 4 NA 1 5 2 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 10.7139515 9.5700096 11.7562801 9.2906345 7.9582900 8.9477973 9.9944236 9.8790525 10.6067385 13.1206446 11.0206292 10.7007334 -1.1500808 12.0176538 2.6571140 12.8646575 5.4347283 8.4663143 10.3976238 13.0764033 -0.1502409 13.3550186 7.4043539 9.5938423 11.1581043 8.2356275 2.1716872 8.9712987 10.5992158 2.0197019 8.3985872 9.7619062 0.4347750 3.6571255 10.3772423 10.6897564 9.2916719 8.4177213 9.3723469 10.8508215 8.3927970 9.1351675 15.3151723 6.5723683 9.0171834 10.5789612 10.5142126 2.1716872 NA 9.0334007 9.7385086 NA 11.0854804 5.8721343 6.4496786 6.2927081 10.4727323 11.1595258 10.4129615 12.5460809 12.0599800 8.3416184 11.3050925 10.9569431 11.5137681 11.4117692 4.5776886 12.4235308 11.4208069 2.1716872 10.6893628 9.9995124 2.7566604 5.6179508 10.7151119 9.9771149 9.9438430 11.2385898 3.8941581 5.9687060 12.6385856 11.4480505 9.6490469 9.5026103 -0.0392580 0.5352000 0.2873900 0.2999500 0.2156000 -0.1330200 0.3618200 -0.0036011 -0.1118200 -0.7740500 2.1618000 1.4117000 0.2660800 0.5516000 0.1386500 1.0536000 1.0536000 -0.0564420 2.7578000 0.0077783 -0.0762780 -0.0243880 -0.4039600 -0.4039600 -0.4266900 -0.1080200 -0.1080200 -0.1080200 1.0195000 -0.0392580 0.6048500 -0.1467000 0.2999500 -0.7285300 -0.1171700 -0.2579700 -0.1153500 -0.0036011 -0.1118200 -0.1118200 0.3185100 -0.4671700 -0.7965300 0.0835030 0.0940670 0.0501080 0.0501080 -0.3748200 0.7347300 0.1386500 0.1386500 -0.0630320 -0.0630320 -0.0564420 -0.4545800 -0.4545800 0.0077783 -0.4376700 -0.0243880 -0.0756120 -0.4039600 -0.4039600 0.2314800 -0.1080200 -0.1080200 0.8445500 0.1940600 0.2009100 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 0.000 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 0.000 8.0395897 14.5501779 6.1071522 10.1177223 3.1745822 10.6004722 NA NA 8.2226302 7.7476110 NA 8.4024344 4.7077456 10.0659048 8.8941593 1.6571369 8.1071532 10.0395899 10.2952975 9.8462388 7.9385005 8.1118602 10.1773180 3.6571255 8.9816224 10.2144471 2.9372314 1.1717192 10.8965483 0.8497591 13.5080884 12.5839457 6.8270454 11.4319073 8.1489732 9.2958146 8.0346405 2.3092053 -0.1502409 7.8637855 7.4043539 10.1489734 8.0346405 3.0976951 7.5711041 8.4215179 9.9687064 7.4081862 8.8941593 2.5502112 11.5095382 2.3092053 3.3733280 9.0912719 5.8308181 NA 9.5213064 7.8693557 4.4644722 0.4347750 14.6408519 1.4347216 10.7749488 NA 7.5502050 2.7566604 8.1328534 9.0713524 13.117408 4.577689 8.002050 12.017654 10.186272 10.118307 13.076403 10.363986 9.735462 10.687393 13.143524 10.797767 9.033401 8.964809 NA 6.597959 12.848003 11.099175 2.550211 9.559694 8.666749 7.009637 10.842013 6.442222 9.556261 11.020629 5.493622 1.657137 8.469985 7.401089 12.257697 9.998242 7.162648 9.401473 10.399550 2.550211 10.774062 9.291672 9.774578 10.048824 10.816992 10.861342 10.610901 8.993148 8.434728 8.900036 2.657114 11.085480 9.398587 9.880432 10.472732 7.404354 15.408126 10.124726 10.271304 12.721959 10.403395 9.599635 1.657137 TCGA-AN-A0AT 62 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.913097e-06 6.242351e-07 10.1795362 8.8717041 11.4637517 9.7456083 8.7552648 9.4088282 7.0352027 11.2287147 11.5173703 12.8827593 9.7412415 10.5575236 -0.2095616 10.8616815 2.1123665 9.2040705 6.8493363 7.6730857 6.8016696 6.8238653 -1.7943573 6.4908830 8.1509242 9.4167602 10.0770005 5.8421039 1.2054551 8.9093663 11.0509702 -0.2095616 10.5737137 7.7829091 2.3754009 4.2278489 9.0796930 10.6963310 9.1553068 8.5431022 9.9287145 9.5217618 3.0128368 8.6700259 14.4471654 8.0371993 10.5500535 10.5217617 6.9933823 4.5453321 NA 9.6359326 9.6212218 NA 8.1347384 7.3087677 6.1421173 6.8201905 9.7600690 12.5875637 9.3450315 10.7862098 13.1790430 8.4710952 11.3514123 11.0124264 11.2942684 10.5983342 5.1002965 11.7756917 7.1450589 4.7600666 10.4453770 9.7653352 3.6107945 3.9868387 8.5464431 10.0560577 11.0403462 9.7107956 0.2055176 5.6063593 12.3829776 11.0852548 9.9351009 9.6291214 -0.3407900 0.0389130 0.4648500 0.1632500 0.0567980 0.0298880 -0.6337900 1.7623000 0.0382060 -0.6483700 0.0223040 -0.0070576 0.8982900 -0.6420800 0.1402800 0.0254320 0.1626500 -0.0716060 -0.6459300 -0.5215400 0.0434400 0.6630900 -0.6850600 -0.4331100 -0.0572500 -0.3082700 -0.0396650 -0.0659840 0.0000000 -0.6750800 -0.3407900 -0.6992900 -0.6214000 -0.6761900 -0.6169100 -0.6337900 -0.6337900 0.1719600 0.0382060 1.2181000 0.0069435 -0.6595700 -1.2929000 -0.4207500 -1.2929000 0.0111210 -0.6629100 -0.6482800 -0.6622600 0.0026357 0.0254320 -1.2929000 -0.6626300 0.0176610 0.0012481 -0.6709500 -0.6088300 0.0083767 -0.6776600 0.0061090 -0.6850600 -0.4331100 0.6511200 -0.3170400 -0.6753600 -0.6848700 0.2861200 -0.7062100 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.661 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 -0.108 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.661 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 -0.108 7.8293619 12.5583512 6.2661756 9.6243868 3.2929437 11.7922027 2.4534122 3.2054864 8.3915946 8.3270136 5.7979364 7.4839294 3.8201892 11.6686213 9.5115418 3.9334027 6.8601161 11.1786394 6.9769696 9.1457939 9.0133179 7.9452606 10.3634586 0.5273707 8.7231496 10.6756306 4.2278489 -0.7946075 10.8663674 5.6317446 12.8086428 12.2821288 6.9197262 9.4020824 7.9570242 9.8307324 2.6649151 2.5274207 0.5273707 7.8902290 8.4722668 10.2107538 6.9128391 8.3205239 8.1403063 5.9736641 10.0088041 6.9334003 10.3536389 4.3754079 12.4468675 2.3754009 3.7904384 9.2958309 7.7879796 6.6191078 8.1376951 8.0431082 7.9265795 5.7290415 13.3727023 NA 11.5494986 NA 9.2742584 3.1596776 8.0743026 8.3640900 13.460093 9.022464 9.112371 10.861682 9.494923 11.498089 6.823865 11.918115 9.982324 11.133017 13.043601 12.545052 9.635933 8.991750 5.216707 8.175586 10.166568 10.402390 6.350138 8.767703 8.197002 5.545329 9.275601 6.429482 4.490885 9.741241 1.527421 NA 10.497514 9.840223 11.682353 9.967031 8.650971 9.943572 8.435501 7.213909 10.896890 9.155307 10.252604 10.644532 12.928661 11.518080 10.295593 8.905920 NA 8.433481 7.311389 8.134738 5.112371 9.833748 9.760069 8.371957 14.813186 10.327014 10.787152 12.320280 11.248678 8.818349 1.527421 TCGA-AN-A0FD 71 0 NA 196 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 NA 3 5 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 2.427581e-07 10.20302908 9.46644726 11.64783744 8.45875274 7.99666668 9.04242902 10.31167033 10.76360744 10.36049092 14.31733231 10.75499428 10.93318540 3.49682023 12.02982610 1.71922726 9.45585693 7.09176752 7.82474749 10.38200889 13.05108997 -1.08804003 15.25348146 0.49682023 9.20871721 10.18914579 6.41965349 1.23376538 8.51698587 10.90231700 0.91188329 8.84111677 7.43933557 -1.08804003 4.15978255 9.13223674 9.14307959 9.06414320 10.68623367 9.70057670 10.73999489 4.08178273 12.75047145 15.11478571 6.54194378 10.14187889 10.52426618 11.16422815 5.83072181 5.40371083 8.96578428 10.43296807 -1.08804003 11.28961122 5.62610325 5.40371083 5.32124987 10.48218850 12.41357121 10.42361105 11.81215917 12.40546372 8.87330814 11.10599962 10.94531580 11.13011889 10.58428373 3.91185453 11.72243003 10.27708720 -0.08819339 10.13586009 9.01645704 3.08258338 3.71921630 9.19262916 10.36718561 10.41319802 10.09673373 1.23376538 8.58428382 12.26058657 10.54848306 9.97120281 9.77216939 -3.4381e-01 7.2928e-02 1.0624e-01 9.6833e-05 7.7050e-03 -2.0510e-01 8.4323e-03 -3.2272e-02 -3.2272e-02 1.6881e+00 -6.7042e-01 -1.0119e-03 1.3311e-02 7.5641e-03 0.0000e+00 0.0000e+00 0.0000e+00 -7.1438e-01 5.2457e-03 5.7890e-03 2.5910e-02 -7.0750e-01 1.9040e-02 -5.7311e-01 3.6569e+00 1.3570e+00 1.8621e-02 1.8621e-02 1.3380e+00 -3.2789e-01 -3.4381e-01 -7.4082e-02 9.6833e-05 -7.1882e-01 -7.3137e-01 8.4323e-03 -6.0604e-03 -1.8944e-02 -3.2272e-02 -3.2272e-02 1.0595e-02 8.9893e-03 -7.7096e-01 7.9013e-04 -7.2564e-01 4.2602e-03 4.2602e-03 7.5641e-03 2.2122e-02 1.6383e-02 0.0000e+00 0.0000e+00 -2.5355e-03 -7.1438e-01 2.0861e-02 2.0861e-02 -6.8230e-03 -7.1304e-01 -7.0750e-01 4.2265e-02 -6.8873e-01 -5.7311e-01 1.7502e-02 -6.7014e-01 1.8621e-02 3.3225e-02 -7.2820e-01 -6.8426e-01 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 -0.290 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 -0.290 8.70302143 14.50285472 6.47410015 9.47123543 0.91188329 11.40446273 8.20417985 NA 8.67673003 10.09176752 1.23376538 8.47410097 2.37128005 10.32018815 9.94940536 1.49682023 8.19030768 9.07550803 7.43542024 9.73442918 8.44368828 7.23378646 11.15175521 1.71922726 9.65921227 9.98399100 0.91188329 -0.08819339 10.73522565 2.23379605 13.71765265 12.10799942 7.92308558 10.39466633 8.77759166 9.99334178 2.37128005 0.91188329 NA 6.93976490 9.42755820 10.12799793 10.15145689 4.81874833 6.12131179 7.31700010 9.95898227 5.52656966 9.60447391 -0.08819339 13.06738819 3.15979062 3.71921630 10.17314243 6.59393934 5.54121435 10.37384937 7.21106672 7.91185813 0.49682023 14.36718563 -1.08804003 11.36074905 NA 9.97929271 3.99932358 8.01776717 9.33812308 13.090972 5.541214 7.972554 12.029826 10.357908 10.292319 13.051090 11.018421 8.904797 9.933533 12.487043 11.809515 8.965784 8.844073 2.081783 8.852906 12.618354 11.210494 7.183322 9.101683 9.833699 7.265005 11.146113 6.286898 8.269411 10.754994 7.220197 3.666745 6.009891 8.043278 11.039530 10.623955 8.051410 10.011864 11.754012 5.639779 10.145736 9.064143 10.528407 10.464047 11.467167 9.353765 10.816493 9.232659 5.041142 9.248856 6.706274 11.289611 7.541215 10.928319 10.482189 6.900543 14.454376 10.267209 10.298799 11.973736 10.477912 8.943904 2.818748 TCGA-AN-A0FF 32 0 NA 172 breast stage ia t1b n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 5 2 NA 3 1 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.040392e-07 10.1454269 9.7559493 12.3210192 9.2064757 8.0134455 9.4384669 10.2978988 10.2581243 9.2995851 13.8275371 8.5510565 11.2485527 2.6455864 12.2535640 3.5581207 9.3598266 6.1801697 8.0318241 10.0738181 13.3008487 3.7675701 14.9237230 4.9331571 9.7452847 10.6630445 9.7460888 2.6455864 9.9648546 10.9888321 0.1431322 7.3492812 7.4769811 NA 4.7078671 9.9838586 10.1719076 10.4075232 11.1638292 9.2358379 11.0404220 2.7280511 11.1897500 14.5243307 8.8073739 9.5721386 11.4636932 11.1374341 5.2446169 6.1127064 9.3774990 11.4290608 NA 10.9605974 5.7869361 7.5210138 4.2585566 10.5318156 11.8101922 10.7709186 11.7010230 12.7403573 9.3146745 10.8769434 10.7208242 11.7971199 11.4472419 5.2305450 11.9443849 10.1663730 -1.4418303 10.2659087 8.9568620 3.6472800 5.9843820 10.7324197 9.9557929 10.3569949 9.7875379 0.5580717 9.8078242 12.8497925 11.3664791 10.1093458 9.5545917 0.83982000 1.19190000 1.60850000 0.00000000 0.47512000 0.00903120 0.00291330 -0.00304750 -0.69505000 0.00833510 0.00833510 -0.01001800 0.00374650 0.00374650 -0.00507460 -0.00507460 -0.00507460 -0.00208720 0.45581000 -0.03640100 0.00458000 -0.00581400 -0.00539920 -0.00539920 -0.00539920 -0.01271300 -0.01271300 -0.01271300 -0.00304750 -0.01183200 -0.00097017 -0.00069303 0.00000000 0.00903120 0.00696590 0.00291330 0.00291330 -0.00304750 -0.69505000 -0.70523000 0.00136280 0.00360760 0.00833510 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00374650 0.00138680 -0.00470790 -0.00507460 -0.00507460 -0.00507460 -0.48500000 0.45377000 0.45377000 -0.03640100 -0.00830050 -0.00581400 0.03326700 -0.00539920 -0.00539920 -0.00180140 -0.01271300 -0.01271300 -0.00304750 -0.27272000 -0.68433000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.681 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.681 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6783561 12.9501001 5.5915418 9.3402974 3.4422269 11.8343880 2.3654686 -1.4418303 8.6255525 6.5804862 0.1431322 7.1430811 3.6455864 10.4188173 9.4514197 2.3654686 9.7596296 9.8359867 11.9357354 10.5006327 10.2649983 8.0479664 10.7460888 4.2019710 9.7460888 9.3386580 2.8800390 0.8800194 10.9355999 3.9504311 12.1165389 12.1573337 7.6376030 10.2380380 10.7602420 9.0767712 1.5581207 2.0175656 -1.4418303 8.1728280 8.9407423 9.6659891 10.2498618 6.0895003 8.6842160 6.6242077 10.5482222 5.4407629 9.4461003 NA 11.4894097 2.2585491 3.9504311 9.5006840 7.3248790 5.3394795 9.7411332 8.8330786 7.6976696 1.3654686 13.6319669 1.5581207 10.9870017 2.1430668 8.0639300 5.4161000 7.6822397 9.3029521 13.2472754 6.0419329 8.4114279 12.2535640 10.4454454 11.7162545 13.3008487 12.1310552 8.9973881 10.6518658 13.3014800 9.8446760 9.3774990 8.6835315 0.5580717 7.0499716 12.1724830 11.143550 7.416099 9.178338 9.441525 8.656150 10.548261 7.720510 10.165448 8.551056 7.169143 -1.441830 7.526785 8.414653 10.361846 10.206476 10.070365 9.510859 12.568384 6.661406 11.513494 10.407523 10.709452 10.007783 9.243743 9.813737 10.943172 9.359827 -1.441830 9.752413 6.728043 10.960597 5.906847 10.854174 10.531816 8.228881 13.371649 10.668275 10.392984 12.227335 10.321745 9.600462 2.465008 TCGA-AN-A0FJ 59 0 NA 242 breast stage iv t2 n2 m1 female 2010 NA no infiltrating ductal carcinoma 8 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.046104e-06 5.548757e-07 10.2207136 9.5397360 12.6334815 9.5490137 7.7106949 8.7554648 10.0101259 10.8008300 12.4158964 13.8483980 11.1910192 10.1347468 4.4335337 11.4285185 3.4335337 9.3510744 8.2692361 7.8258543 11.9772129 7.2804200 NA 6.7230438 7.1091014 9.0580275 10.9597097 5.8334670 5.0965022 7.3025302 11.1165312 NA 7.6814640 7.7910886 NA 3.8485779 9.2192615 10.5239432 9.0033923 7.8746365 9.1293448 10.9662172 6.7312172 7.8296657 15.8394906 7.3022560 9.8902333 11.3280175 10.1637236 2.5855395 0.8485578 8.9983213 8.9430918 0.8485578 12.0455860 4.4730660 4.8485729 6.3928944 9.2090554 12.0911528 9.2322784 11.8481044 12.6851505 7.3616438 11.4574449 11.0462495 11.3815793 11.7421284 4.8182012 12.2297565 4.9074676 0.8485578 10.0996620 9.8076101 8.4209838 3.3510770 8.1794911 10.5221776 10.0965016 9.5350747 0.2636354 3.5115439 13.7200944 10.4165302 10.0050785 10.0539601 -0.2293900 0.1648200 0.0714590 -0.3753200 0.2388300 -0.6891100 0.8863500 0.1123500 0.6778000 0.0620040 0.0620040 3.6569000 0.0000000 0.0216700 0.9026000 -0.0087873 0.0454690 0.1598700 1.1587000 0.1190100 -0.7019500 0.8002300 0.0061749 -0.6936400 -0.4329500 -0.0311580 0.1016900 -0.0093393 -0.7655700 -0.1610900 0.5513300 -0.0540870 -0.6912000 -0.8072900 -0.6937400 -0.6979800 -0.6900200 1.6783000 -0.6950900 -0.7328900 0.0209690 0.8008200 0.0547280 -0.7020400 -0.6850200 -0.7054500 -0.8043900 0.7785800 -0.1261000 -0.0991460 0.0187290 -0.7054500 -0.7443400 1.7242000 -0.1261000 -0.2356400 0.0922700 -0.7048200 -0.8421500 0.3361700 -0.7654000 -0.5042700 0.3185900 -0.8276100 0.0620040 0.0674430 -0.2645000 0.0159330 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.200 -0.200 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.200 -0.200 7.0837910 12.8847477 NA 8.6730027 4.5490161 12.7465456 NA NA 8.6473159 7.9605789 8.8947887 10.3344034 8.8485741 11.3494160 9.0383986 1.2636354 7.1153610 10.5633920 4.9915309 8.4435209 8.3652984 7.6079073 11.9894039 NA 9.3928946 10.3168587 0.8485578 NA 9.7614635 7.3025302 13.4293822 12.9879123 8.9253898 9.4924303 6.3510753 10.1177008 6.2061255 2.8485779 0.8485578 6.1339765 8.9898299 9.1584294 7.4031629 7.6730023 9.2437512 5.5855395 9.2551334 5.0965022 10.6740629 5.9778569 12.5546384 2.8485779 3.9640474 10.1162270 6.6505951 0.2636354 7.7352866 7.7753640 2.8485779 4.5115376 14.2451343 1.8485578 11.4250585 NA 9.2466052 5.2636129 8.3377530 5.7393459 10.952115 8.983000 7.859801 11.428519 10.306639 10.859335 7.280420 11.984497 9.430239 10.849513 12.361479 12.583707 8.998321 7.771406 4.818201 7.647316 7.297035 10.781773 7.779312 8.889321 10.184709 9.088570 10.136086 4.878323 7.211979 11.191019 10.113798 2.848578 9.539736 10.203837 12.991000 10.691448 7.601590 8.791089 9.292899 4.351077 11.181241 9.003392 9.926280 9.735287 11.527761 9.983856 10.116921 8.710695 NA 8.501132 3.070973 12.045586 4.964052 10.626651 9.209055 7.525706 15.098255 10.628293 9.560528 13.955355 11.562247 8.574225 4.723045 TCGA-AN-A0FK 88 0 NA 213 breast stage iiib t4 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 3 NA 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 5.548757e-07 10.5326906 9.8824769 11.4084114 8.4054453 8.1961900 8.7340091 10.1828548 9.7872421 10.1763728 14.5085199 11.8960660 10.4046531 1.5741500 12.3310069 3.8220673 9.3406669 8.8173118 7.8756339 12.3856130 13.6233058 1.8960781 14.5702804 3.3814910 9.8245192 10.6256867 5.2034948 -1.4258500 10.4734948 10.5078285 0.1591125 9.1439936 6.7390447 NA 5.3814945 9.7945163 10.4305635 9.9078524 10.3113853 10.3505709 11.2952371 4.1287306 12.4932806 14.7410267 6.5809972 9.4258870 11.3231693 11.1763728 3.6616014 4.1591044 8.3206521 11.1045442 0.5741500 10.6741432 3.7034219 3.7034219 2.5741500 10.3697718 11.7545133 10.6476101 10.1050319 11.9918586 8.2483304 10.5871116 10.4491192 10.5699051 10.7719689 4.5965058 11.1906868 10.0654901 NA 10.0624802 8.7799311 2.4915709 4.5283338 11.7610259 10.0139688 9.9669919 10.1094133 -1.4258500 8.0639861 11.3227501 10.3923206 9.6307757 8.9491774 -0.4114600 1.1072000 1.2370000 -0.0045695 -0.0045695 -0.4182700 0.3713400 0.3690400 0.3690400 0.3595300 0.3595300 0.3595300 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3437200 0.3458300 0.3458300 -0.0013858 0.0020805 -0.3867400 -0.0097877 -0.0097877 -0.0097877 0.2827900 0.2827900 0.2827900 0.0000000 -0.3816800 -0.4058400 -0.3688400 -0.0045695 -0.4182700 -0.4182700 0.3713400 0.3664100 0.3690400 0.3690400 0.3644400 0.0000000 0.0000000 0.3595300 0.1986200 0.1986200 0.1986200 0.1986200 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3437200 0.3437200 0.3458300 -0.3997500 -0.3997500 -0.0013858 0.0020805 -0.3893300 -0.3832500 -0.0097877 -0.0097877 -0.0052610 0.2827900 0.2827900 -0.0088143 -0.0103700 -0.3773000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 0.000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 0.000 6.9919900 12.6239014 2.4810406 9.4414167 3.0335640 10.6675555 -1.4258500 NA 8.3472772 7.8938099 -1.4258500 6.4750054 -0.4258500 10.0942655 9.1229597 1.1591125 6.6721693 9.2287740 11.5490902 10.8170143 9.3548008 7.2641357 11.3406668 1.3815049 10.1525106 9.4521889 2.7440534 1.3815049 10.7731967 1.7440750 13.0495547 12.0339537 7.4689555 10.7605617 7.6482792 9.7213429 NA 2.4810406 NA 0.1591125 8.7945163 10.2256381 9.9610782 2.4810406 6.4066489 6.7238848 10.4336728 6.7034205 9.0888521 NA 13.8665315 1.1591125 6.5514176 9.8493486 6.0770891 5.0819318 8.9095283 7.8409245 8.3538574 0.5741500 13.8679328 -0.4258500 10.7034210 NA 9.3595904 6.1439933 8.1496770 9.0139688 14.018284 5.128726 7.776262 12.331007 10.097210 11.979013 13.623306 11.129925 9.501279 10.809554 13.258119 10.473872 8.320652 10.357136 3.661601 7.045813 12.047970 10.8841826 6.8315251 8.7848092 8.6602741 8.5992776 10.4103500 5.5514176 8.2412496 11.8960660 5.2745785 5.2323499 9.8635805 6.7885539 9.6839685 10.3071532 8.2901000 9.6253468 12.4772666 5.2034948 10.6946253 9.9078524 10.6718409 10.4712270 10.6209209 9.6388806 11.0597157 9.3604075 0.8960781 9.4888819 6.1363801 10.6741432 6.0170823 10.1925234 10.3697718 6.9448257 13.0519594 10.0030214 10.7005197 12.6788186 10.2157382 8.9535164 2.6615900 TCGA-AN-A0FL 62 0 NA 231 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4.161568e-06 1.213791e-06 9.0515652 8.4908192 10.5443087 6.9369229 8.8474245 9.0134972 10.9724143 10.0377233 12.1808483 13.4743309 9.0652756 10.5816464 NA 11.7232046 2.9691044 10.0763972 5.6231060 8.2545052 11.4338291 8.7990125 NA 11.5822967 7.6889951 9.3379947 10.6006012 8.3225096 0.4666532 7.1248141 10.1449094 -1.1184137 8.7930323 5.8241543 NA 4.0910905 9.7809972 9.0018782 8.4266048 9.0578133 9.6061540 10.4857301 -0.1184137 6.9849277 15.0742028 3.5848543 9.7734239 9.4871197 7.6498245 2.4666010 NA 8.5200761 9.6547794 NA 10.1571828 3.5254926 2.5820742 3.4052027 10.3889393 11.2167514 9.1331227 10.9631237 12.2368537 8.6809217 9.7042111 9.5155437 11.2479625 10.2734209 3.3410749 11.7947167 9.7089830 4.4052027 9.9150633 9.1531033 2.5842891 2.5820742 7.6825403 8.5663890 10.2819861 10.0377233 2.0515809 6.2303683 11.7359243 9.9816455 9.5864086 9.5191707 0.97152000 0.91743000 0.90452000 0.00083195 0.75375000 -0.01532900 0.02034300 0.62388000 -0.02109800 -0.87720000 -0.87720000 2.15180000 1.44710000 -0.01519100 0.65866000 0.03298600 0.03298600 -0.87557000 -0.87190000 -0.04495700 0.00166420 -0.87354000 -0.84659000 -0.84659000 -0.60177000 0.75108000 0.03397200 0.05722600 0.00763920 -0.85281000 0.22468000 -0.90320000 -0.85043000 0.00546450 -0.84891000 -0.90578000 -0.89794000 0.64886000 -0.02109800 -0.01519100 0.78176000 -0.01188700 0.04670000 -0.00830050 -0.00830050 -0.00830050 0.00055459 -0.01519100 0.75949000 0.05195600 0.03298600 0.38171000 0.41078000 -0.87557000 -0.86578000 -0.86727000 -0.02370300 0.00499690 0.82980000 0.03933700 -0.85480000 -0.60622000 -0.86452000 -0.77727000 0.77368000 -0.01807800 0.02412700 0.84081000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.873 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.873 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.749 0.000 0.000 0.000 0.000 5.8589209 12.3244542 5.0714667 10.9927759 2.5820742 12.3318205 NA 5.2035692 9.2203766 10.3219904 NA 7.4207990 -1.1184137 10.9260344 9.3654561 NA 4.1295715 10.7546998 10.0515653 12.5613403 9.0561291 6.8928670 12.3936399 0.4666532 9.1354877 10.5889994 1.6889860 NA 9.3482267 0.8816646 13.4441212 12.7265422 7.2867814 9.2718092 9.6390302 10.2463221 2.3410749 3.4666010 -1.1184137 0.4666532 9.9060874 11.2960612 11.7190711 2.8816450 9.4815252 8.5236921 9.8094183 7.5146352 11.7792967 7.4246719 13.3573104 1.6889860 3.8816450 10.4356966 5.3709280 -0.1184137 7.8816402 6.3245838 2.0515809 -1.1184137 13.9612917 0.8816646 11.4034860 NA 10.7220248 5.2910325 7.8182779 9.2147956 11.004769 6.307906 8.367470 11.723205 9.582947 11.428052 8.799012 8.552296 8.742929 8.919187 12.591263 10.532692 8.520076 6.051566 2.341075 6.365456 10.653542 10.592016 5.623106 9.457180 8.575127 4.662997 10.136238 3.926037 3.688997 9.065276 7.554065 8.225936 10.109256 7.046045 11.782507 10.286250 7.507349 9.604448 7.770384 2.466601 9.947400 8.426605 10.935566 10.695822 11.144909 11.060927 10.491281 8.669543 NA 9.763374 2.688986 10.157183 5.436228 10.525046 10.388939 7.265345 14.346920 9.896358 11.775511 9.212557 10.068992 8.659717 -1.118414 TCGA-AN-A0FN 61 0 NA 218 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 2 NA NA NA 3 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 10.58501885 10.02345664 11.21405557 8.91628973 8.46764060 9.47586088 9.20543015 10.76098285 10.49654634 7.99942281 11.08610284 10.67166189 1.75339060 11.94062325 2.89089412 10.46454565 7.03879721 8.70526225 8.32476831 12.13363949 0.01649632 12.40597104 5.57101841 9.76853122 9.08699760 5.48674976 NA 10.09369010 10.30529535 3.71687021 8.48403499 7.94716643 11.31487379 6.57101841 9.58691746 10.69708189 10.01595955 10.98821233 9.75395830 10.95967671 0.01649632 9.82807157 15.54182777 8.56736861 9.54716079 11.17903046 11.15683306 5.15938699 4.31410918 8.86191940 11.50108440 1.43146250 11.56235907 6.65546919 7.73296311 5.52949927 10.60919776 11.51361584 10.50292914 12.85792814 12.74774833 8.52025487 11.29371671 10.61623684 11.43340272 10.69854607 4.31410918 11.81152197 9.64213818 0.43146250 10.59919857 9.14485322 3.07992419 6.50292884 10.88190485 10.12277417 9.79121630 9.88782118 2.60138750 8.28633504 13.91691880 13.01148979 9.43498469 10.00558722 -0.16018000 0.23917000 0.23917000 0.00133980 -0.00732120 -0.00106130 -0.00115570 -0.00281760 -0.00281760 -0.00419420 -0.00419420 0.00592280 0.00052693 0.00000000 0.00120100 -0.00203940 0.00078495 -0.00627540 -0.00198680 -0.00101710 0.00244990 0.00439400 0.00508880 0.00508880 0.00508880 0.00217230 0.00217230 0.00217230 0.00564480 -0.16018000 -0.16018000 -0.00299790 0.00133980 0.00536680 -0.00106130 -0.00115570 -0.00115570 -0.00281760 -0.00281760 -0.00281760 0.00050760 0.00050760 -0.00419420 0.00522780 0.00522780 0.00522780 0.00522780 0.00000000 0.00000000 0.00120100 -0.00203940 0.00078495 0.00078495 -0.00627540 -0.00198680 -0.00198680 -0.00101710 0.00244990 0.00439400 -0.17138000 0.00508880 0.00508880 0.00078495 0.00217230 0.00217230 0.00564480 -0.00571470 0.00703550 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.60420683 14.90992046 6.94716702 10.60013890 5.73323773 10.15342042 5.17293549 1.01642500 8.39580787 9.66328804 -1.56832356 8.81568942 4.45383361 10.25004895 9.52488428 1.75339060 10.83501152 9.62991191 10.87077828 9.30106058 9.18188920 6.99370946 12.88409416 4.01642500 7.91326642 10.29255366 4.47586311 NA 11.15811072 2.33836736 13.23408415 12.10885611 9.74718244 10.33760585 9.20130476 9.25324074 3.56075163 1.43146250 -0.56853750 3.64092165 8.33985935 9.96187318 9.76518116 7.10389204 6.87150486 5.08968034 10.52323271 6.45937260 9.59574532 0.01649632 11.65184513 3.60138750 5.73524867 9.44413323 5.98421336 7.39725107 10.17714119 9.60576840 9.11796744 1.60141128 13.85244678 2.67940128 10.55688028 -1.56832356 8.92131463 6.75339461 8.12843415 9.18049824 12.553471 5.978360 8.462134 11.940623 10.487088 10.501252 12.133639 11.067412 9.185294 10.518598 13.661262 10.095025 8.861919 8.932309 -1.568324 7.437091 11.052832 11.170192 6.038796 8.996569 8.661487 7.744349 9.911999 8.452447 7.578672 11.086103 7.169559 3.475863 5.669871 6.307984 11.663738 10.986775 8.022054 9.115339 10.762384 7.933304 11.643763 10.015960 10.696789 9.289448 10.805691 10.349957 10.418020 9.075323 -1.568324 9.779171 8.595116 11.562359 9.291002 10.795875 10.609198 6.943219 14.024417 10.059001 10.701178 12.718818 10.378008 9.050770 3.560752 TCGA-AN-A0FS 55 0 NA 210 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 2 NA 2 5 3 4 3 3 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 4.508365e-07 10.1724260 10.0213724 12.0229534 9.4295386 8.6989168 8.8788685 10.3799529 9.7267791 9.8605148 12.1322995 11.7566496 10.5712265 3.4108702 13.0629942 3.1884801 9.1593872 6.8671799 8.5033801 9.3667322 13.5667471 1.4779881 14.4158476 6.1984667 9.6945144 10.7200805 6.7701009 NA 7.8624787 8.2485780 1.8259077 7.9418851 8.0588473 0.3405053 5.2853430 9.8788685 10.2114666 10.3410490 11.7965318 10.2903122 11.0707858 4.7867427 11.3940041 14.4758581 8.1691042 9.6346466 11.3173360 11.2949727 5.2182309 7.1984667 9.2377260 11.0033318 -1.9816507 11.2816798 8.9901008 4.1478439 4.4279480 10.3291701 11.6981474 10.4728567 12.2166954 12.6378030 9.1536252 11.1234837 11.0922672 11.7341977 11.3327158 4.9610723 11.7760516 12.9170643 -0.3964983 10.0836369 8.9901008 3.4197816 3.9727570 10.2655948 9.8605148 9.9507721 9.8387364 4.4615024 8.6479138 13.3599372 12.8592370 10.2664849 9.7879820 -0.00622860 1.04620000 1.62710000 -0.01025700 -0.01422800 -0.00445160 0.04898600 -0.00258210 -0.00646000 -0.63632000 -0.63632000 0.00097064 0.00300300 0.00861350 0.02370600 3.21080000 0.00736090 -0.00207840 -0.01931400 -0.20242000 0.00500770 0.00110930 -0.01409000 -0.01959300 -0.01959300 -0.03204100 -0.03204100 -0.04155300 0.01698500 -0.01703000 -0.00622860 0.00972260 -0.01025700 0.00819590 -0.00277070 0.00000000 0.00000000 0.00392020 -0.00646000 -0.00262740 0.00013863 -0.00483550 -0.63632000 0.00255010 0.00255010 0.00255010 -0.03289200 0.00861350 0.00861350 0.02370600 -0.01326400 -0.63916000 -0.62083000 -0.00207840 -0.00758760 -0.00758760 -0.20124000 -0.00373950 0.02301100 -0.63169000 -0.01409000 -0.01959300 0.01398300 -0.03204100 -0.03204100 0.01373400 0.00376530 0.03087300 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 0.000 8.57889004 13.38063818 7.89507415 10.34076720 2.41088378 11.12446591 0.01849175 2.01856296 8.70768180 8.48412363 1.82590771 8.32347906 4.18848005 9.90920171 9.18534823 1.60350173 10.69208732 9.78425793 10.40091123 10.17274264 9.73565536 7.17842882 11.12757183 2.10601324 9.40926385 10.02312905 5.41943776 NA 10.78135463 3.94929213 13.09345145 11.86473332 8.88969256 10.71639370 7.97275353 9.34891401 5.07384165 1.47798811 -0.98136583 2.60352546 9.24917841 9.89584153 10.56134743 7.45526885 7.83592471 5.38487870 10.76675026 5.41087360 9.82752150 NA 11.70494850 2.54210944 4.69098132 9.88226750 5.42582517 3.01856296 9.22190535 8.95224794 5.93741973 0.01849175 14.01820513 2.26648673 10.28006467 NA 7.76339099 6.08464684 7.86561451 8.75749402 15.082588 4.588415 8.039537 13.062994 10.084505 11.293227 13.566747 12.651098 9.036062 10.689435 13.311670 10.169574 9.237726 11.830133 -1.981651 7.717262 11.742112 11.224045 8.430068 9.096708 9.064317 8.333707 10.561043 5.573147 6.317765 11.756650 5.633268 1.018563 9.136850 5.761708 10.865615 9.998340 7.878092 8.486163 12.216388 5.690984 11.410398 10.341049 10.360354 9.941885 11.639694 9.445346 10.708337 8.649734 1.018563 8.743617 4.732801 11.281680 6.477990 10.585294 10.329170 7.404528 14.393121 10.100041 10.287099 12.489852 10.170842 9.860908 2.542109 TCGA-AN-A0FT 63 0 NA 214 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 4 NA 3 6 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.976745e-06 9.363527e-07 9.6074931 8.0514162 10.6143869 5.9985295 8.5163785 9.2464577 8.6610020 11.0130943 10.6170588 14.2315274 9.6852127 10.4841244 4.0171469 17.5466579 3.7317480 9.1035205 4.5131054 8.4799366 2.8191981 13.0696444 NA 13.7108117 NA 10.6344128 9.7582672 6.7924402 -1.2681217 13.2631862 9.4468478 1.3167250 7.7706626 6.2474434 NA 4.7541125 7.6654347 10.4160541 9.5204621 9.3510468 9.2805657 10.2245984 13.8391243 10.6307230 14.5983224 4.7496683 9.7720334 10.1165275 10.1569597 6.5065305 5.1746860 7.3353698 8.9725350 -0.2682954 10.4945410 5.5519220 5.0536718 4.2236002 10.8664910 11.5493271 10.0876454 10.9135172 12.1215096 8.6265614 10.8095609 10.0986288 10.8042114 9.9838178 2.0536674 11.2860928 9.8783124 0.3167250 9.5551110 9.2325857 2.9796778 4.5131054 11.3615558 10.2675051 9.5928307 10.0406517 2.6386299 9.8271409 11.8521437 10.6727914 9.6318559 9.8846623 1.2453000 1.7284000 1.4273000 0.0000000 0.0556190 -0.0241510 0.0387330 0.0425520 -0.0189950 -0.5573000 -1.0824000 1.2207000 0.0352030 0.0402880 -0.5525900 -0.4439700 -0.8017100 0.2231000 0.2231000 0.7065800 -0.0108220 -0.7859100 2.6235000 3.6569000 0.8084700 -0.4672000 0.6981500 -0.4775700 2.5299000 -0.4545000 -0.2334000 -0.2580900 0.0027365 -0.4955100 -0.0223700 -0.8061100 -0.8182100 0.0425520 -0.0189950 -0.0189950 0.7180500 -0.5183800 -0.5605000 0.1847600 0.2203300 -0.4976000 0.2106500 0.0514430 0.0514430 -0.5778300 -0.4956800 -0.8017100 -0.8017100 0.2231000 0.2231000 -0.2666400 0.8115400 -0.5084300 -0.7895300 0.0762390 -0.2153100 -0.2135800 0.0431180 -0.4777800 0.0996850 0.5071900 0.7472200 0.0110830 0.000 0.000 -0.778 -0.778 0.223 0.223 0.753 0.000 -0.537 0.000 0.000 -0.215 -0.215 0.000 0.000 -0.423 -0.423 0.921 0.921 0.000 0.000 0.747 0.000 -0.232 -0.232 -0.519 -0.519 -0.444 0.000 -0.806 -0.806 0.000 0.000 0.270 -0.448 0.657 1.214 0.211 0.211 0.165 0.165 0.000 0.000 -0.778 -0.778 0.223 0.223 0.753 0.000 -0.537 0.000 0.000 -0.215 -0.215 0.000 0.000 -0.423 -0.423 0.921 0.921 0.000 0.000 0.747 0.000 -0.232 -0.232 -0.519 -0.519 -0.444 0.000 -0.806 -0.806 0.000 0.000 0.270 -0.448 0.657 1.214 0.211 0.211 0.165 0.165 7.6446329 12.4910078 3.0536674 9.8005220 3.3628486 11.7958129 -1.2681217 NA 7.7679176 7.0936880 NA 7.1952679 2.3166961 10.8215253 8.8441832 -0.2682954 8.1283486 9.1993494 8.9190957 11.8603826 8.5189773 5.3899557 11.9100974 1.6596506 8.5455248 9.8396146 3.0536674 -0.2682954 11.5614665 1.0536674 12.5408085 12.6380707 8.4613644 11.4343494 7.5990224 11.3339787 4.4596611 3.2553043 -0.2682954 4.7090259 9.8706555 11.3386116 11.2484288 4.5390968 9.3709127 8.2977976 10.5717348 6.4999288 8.7720334 -1.2681217 10.1224501 -1.2681217 3.4866372 9.0795976 7.2965795 NA 9.0286600 8.2650735 5.3464535 0.3167250 14.3369050 1.7317480 10.3769519 -1.2681217 8.2728402 6.6975278 8.6595218 8.8827604 12.329457 4.316703 9.018301 17.546658 10.783041 11.282250 13.069644 10.689209 7.998530 9.932642 12.866892 9.708308 7.335370 7.683028 0.316725 7.076040 12.249536 10.781933 6.278639 8.921544 8.731744 7.239538 10.562897 6.293987 7.251380 9.685213 5.840269 -1.268122 9.610561 8.345147 9.634872 10.848737 8.151704 10.119761 6.513104 3.776136 12.176839 9.520462 10.251871 9.709024 10.144314 9.462214 10.684121 5.829776 8.895394 9.502482 2.191184 10.494541 7.479936 10.768604 10.866491 7.035525 14.183760 10.246951 9.764478 11.881173 11.266776 9.817216 1.053667 TCGA-AN-A0FV 58 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 1 NA 1 6 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 6.589149e-07 9.4641148 9.6327317 11.3541187 9.5300518 8.5545743 9.8385776 9.6658511 10.2605577 11.3709531 15.0310194 8.8264233 11.0119948 2.7893328 17.5444448 2.5262942 8.2632654 6.2341181 8.4427764 6.3336545 12.8899964 -1.3804461 12.6462783 2.4267746 9.7554004 11.0618342 6.4711582 -1.3804461 10.5770154 11.3267682 6.2632654 8.0202883 7.1390458 -1.3804461 3.4267612 9.8500301 10.0773030 9.8337282 11.0747363 10.0398956 10.9678606 12.0620934 8.3974864 15.1934112 8.5593997 9.6208173 11.0713928 10.8853170 5.9503261 6.1663037 8.9140299 10.7180991 0.2043912 10.6807802 5.0951438 4.6854973 4.9048116 10.5334204 11.6323827 10.1267082 11.1544414 12.6792605 7.7331509 10.9339923 9.9653687 10.9486448 10.5236673 4.8673381 11.3250415 8.3941960 1.2043912 10.5274264 9.5278017 2.1189245 5.2193234 11.1871275 10.4629376 10.3784650 9.5923888 4.1429688 10.7364028 11.9387989 10.2829671 9.9769610 9.7068719 -0.41487000 0.41932000 0.41201000 0.02146300 0.00000000 -0.41223000 0.00694350 -0.42287000 -0.41597000 -0.42582000 -0.42582000 0.01084200 -0.42615000 0.43634000 0.00597000 -0.44491000 3.65690000 -0.41245000 0.01950300 0.41597000 0.00541390 -0.42265000 0.38039000 3.65690000 0.41798000 -0.43333000 -0.43333000 -0.43333000 -0.01546600 -0.41970000 0.01014600 -0.00875150 0.02146300 -0.89350000 0.01237600 -0.41344000 -0.41344000 -0.42287000 -0.41597000 -0.43083000 0.00092013 -0.43076000 -0.42582000 -0.92025000 -0.42833000 0.40261000 0.40261000 -0.42331000 -0.43951000 0.00597000 0.00597000 -0.86105000 -0.86105000 -0.41245000 0.01950300 0.01950300 0.00235810 -0.00047564 -0.42265000 0.41965000 -0.43680000 -0.44156000 -0.44502000 -0.43333000 -0.43333000 0.59062000 -0.42876000 0.41446000 -0.423 -0.423 -0.861 -0.861 -0.412 0.000 0.000 0.000 -0.423 0.407 0.000 -0.442 -0.442 -0.421 -0.421 -0.433 -0.433 0.000 0.412 0.591 0.000 -0.429 0.000 0.000 0.000 0.000 0.000 -0.858 -0.858 0.000 -0.411 -0.423 -0.423 0.000 0.000 -0.426 0.000 0.403 0.403 -0.259 -0.259 -0.423 -0.423 -0.861 -0.861 -0.412 0.000 0.000 0.000 -0.423 0.407 0.000 -0.442 -0.442 -0.421 -0.421 -0.433 -0.433 0.000 0.412 0.591 0.000 -0.429 0.000 0.000 0.000 0.000 0.000 -0.858 -0.858 0.000 -0.411 -0.423 -0.423 0.000 0.000 -0.426 0.000 0.403 0.403 -0.259 -0.259 8.2560336 14.1432773 5.2341181 9.7678857 2.4267746 11.2880725 0.2043912 NA 8.0870146 8.2953663 2.3198491 8.3353711 2.6194130 10.7253176 8.7918365 4.9048116 5.2193234 9.7415900 10.2891800 11.8518300 8.4285340 6.6908710 11.3293544 0.2043912 8.3250414 9.9334258 0.2043912 1.2043912 10.7075348 2.4267746 11.6299372 12.2723660 6.7993179 9.9111554 8.4056789 9.5981195 4.5736048 4.7486920 -1.3804461 NA 7.5142272 9.8172400 8.1112619 2.0788489 10.3127436 6.8385774 9.9475230 6.8530288 9.3650834 -0.3806339 9.5765112 2.4267746 3.0117282 9.5876798 8.3921525 0.9413317 8.2414608 7.4427760 2.6194130 2.7068620 13.5224907 0.2043912 11.2412320 NA 7.2377941 3.7068731 8.6052510 8.3826214 11.9829197 6.3473290 8.3353711 17.5444448 10.3721368 11.2751634 12.8899964 9.9648143 12.3759007 10.3447754 12.5168764 8.5779616 8.9140299 9.1272038 0.9413317 7.6194093 11.6393472 11.9171851 5.2193234 8.6760466 9.2811871 8.4411830 11.5145905 5.9413364 8.5005228 8.8264233 7.0031131 7.5938236 9.9260405 7.1296982 12.4621522 10.6955566 8.3284927 9.8590076 9.2524043 2.7893328 11.0650318 9.8337282 10.3289237 9.8160112 10.8533283 9.3224474 11.2435191 8.4601868 6.2847455 8.4693300 2.7068620 10.6807802 8.6137626 12.1385538 10.5334204 6.6250337 13.8068771 10.4011786 9.5427365 11.7883945 9.9884610 9.9977040 0.9413317 TCGA-AN-A0FW 67 0 NA 11 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 1 NA 3 1 1 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 2.150143e-06 6.242351e-07 9.4542935 9.6899129 12.1415972 7.3107473 10.0505445 9.1030423 10.4635651 10.2832054 8.9711742 14.4605145 11.0388283 11.2110093 0.3192711 11.5540430 4.1265765 8.4106608 5.3960396 8.2110093 10.0347587 13.1812817 NA 13.2766904 1.9041950 9.0964809 11.0898894 10.5968036 4.7621681 11.3251588 10.5480443 0.9041950 7.2763273 6.2907690 -0.6808445 3.4485046 9.5371833 10.1694125 9.8486561 9.8457248 10.2075884 11.0096601 6.1895894 12.1546839 14.8153147 9.0327753 11.3225678 11.4783085 10.9756505 4.8583839 5.1772082 9.2170710 11.5871826 -1.6808445 10.8336931 4.4891511 4.8270213 4.0196663 11.0006836 12.4320723 10.0488463 11.4924342 12.6608834 7.7201047 10.3443652 10.4073513 11.4732525 11.5838148 5.1005867 12.3848941 9.1362091 -1.6808445 10.1314029 9.1584294 3.0805042 3.9916534 10.8063119 10.2189601 9.7126161 10.5531448 0.9041950 8.6657392 11.7647578 10.5453366 10.5519463 9.6817174 1.7208000 1.7128000 1.7128000 -0.1223900 0.3140200 -0.1742400 0.0072217 0.2831100 -0.0963080 0.3303900 0.3303900 0.3244700 -0.5521600 -1.0168000 -0.0912870 2.7823000 -0.5509600 0.2978700 0.3055300 0.3473000 0.3002600 0.3567500 -0.0768120 -0.5983800 2.6512000 -0.1830700 0.2183700 0.2183700 0.6827300 -0.1397500 -0.0964400 0.4153000 0.3357700 0.2381400 0.1740700 0.0072217 0.0072217 0.2831100 -1.0234000 0.3194800 0.2535500 -0.1035500 0.3512000 -0.1105100 -0.1068400 -0.1068400 -0.1162600 -0.5386500 -0.5376300 -0.1125300 0.2350000 -0.5556700 -0.5556700 0.2978700 0.3095300 0.2924700 0.3401500 0.3002600 -0.5521600 -0.6049700 -0.0768120 -0.5983800 -0.5335800 0.2009100 0.2183700 -0.0948560 -0.0985500 -0.1238200 -0.539 -0.539 -0.113 -0.513 0.298 0.298 0.340 0.300 -0.195 0.699 0.000 -0.143 -0.143 -0.528 -0.528 0.218 0.218 0.000 1.713 0.683 0.683 0.000 -0.124 -0.111 -0.111 0.336 0.336 -0.180 -0.180 0.000 0.000 0.283 0.000 0.319 0.319 0.330 0.330 -0.107 -0.107 0.000 0.000 -0.539 -0.539 -0.113 -0.513 0.298 0.298 0.340 0.300 -0.195 0.699 0.000 -0.143 -0.143 -0.528 -0.528 0.218 0.218 0.000 1.713 0.683 0.683 0.000 -0.124 -0.111 -0.111 0.336 0.336 -0.180 -0.180 0.000 0.000 0.283 0.000 0.319 0.319 0.330 0.330 -0.107 -0.107 0.000 0.000 8.2922052 12.5671531 4.2734189 9.0724424 3.4827192 10.9785526 2.0196663 -0.6808445 8.8359105 9.1273854 -0.6808445 7.4277503 4.0196663 10.1322050 8.6778768 -0.6808445 8.3443652 9.4459301 6.9004261 9.3980435 10.8338632 7.6252873 10.7040093 0.9041950 9.0505447 9.5848406 4.9630810 1.7786712 12.2716028 2.9630857 12.5807329 12.5643326 7.9987055 9.9476711 7.0403248 9.8467025 4.0196663 0.9041950 -0.6808445 4.9339361 8.8388620 9.9867807 10.4661124 7.1103883 7.9619092 5.4485079 10.5962223 4.2499610 11.8367720 0.3192711 11.0458695 3.0196663 3.6767752 9.7518458 7.3711145 3.5286838 8.8290006 8.2484841 8.0890632 2.7115390 14.0999704 -0.6808445 11.2110093 NA 8.2806752 4.8890792 8.0539351 8.9585663 14.05008494 5.73707830 8.11038830 11.55404299 10.49446321 10.76760001 13.18128170 14.40166572 8.58601221 10.99054550 14.03733028 10.65321949 9.21707097 9.37450810 -0.09588204 9.09976543 11.77699121 11.1314029 6.5623997 8.7683742 9.8265247 7.5504467 10.6032312 5.6767780 10.3509268 11.0388283 6.6986033 6.5999961 4.3192277 7.5699505 9.7496781 10.3636197 8.6405786 9.8025375 11.8162042 5.2261154 11.3132466 9.8486561 11.4762567 9.9787755 11.0905087 9.4600553 10.7441792 9.0411792 NA 8.8768902 4.9916488 10.8336931 6.6456556 10.6088382 11.0006836 8.1038606 14.0320481 10.5941860 9.9639831 11.8897929 10.9214605 9.3415933 0.3192711 TCGA-AN-A0FX 52 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 2 3 2 5 1 6 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.788144e-06 3.632167e-07 10.12961171 9.74116594 11.54736813 9.57915054 8.04850213 8.88486437 10.07690082 10.77937120 11.72126819 12.52443079 10.90468384 10.83836959 0.93651545 12.24833995 3.43899806 10.61245405 6.29404907 9.22574753 10.81070995 7.54135918 1.81097772 9.87852274 9.93602731 9.05886790 11.57115686 7.70908657 NA 10.27931249 10.32881448 3.25842847 8.12632142 8.14106845 0.35151526 4.70908657 10.27114282 10.32738254 9.08709045 10.15566563 9.25013590 11.08539730 5.44956798 7.56585380 15.84627297 8.13010460 9.83735387 10.79006653 10.63520170 6.64155325 3.93649661 9.57854875 10.71457421 NA 10.20250270 4.93649661 6.63693632 4.65531748 8.83030413 12.07988027 10.14269742 12.45899685 13.05916330 7.57070275 11.05954071 11.18161792 10.75401369 11.35540379 4.87509688 11.97621579 10.45678829 -0.06355993 10.40952629 9.69749410 6.65622748 3.77779842 11.51502702 11.58425526 10.48049547 9.67684002 3.25842847 9.52271138 12.75601091 12.13371375 10.17450367 9.98725264 0.0276380 1.2391000 0.6124400 0.3651000 0.6866300 -0.3894000 0.8922700 0.3870000 0.0070826 1.0375000 0.3209300 2.9444000 0.0000000 0.0000000 -0.0373540 -0.0576540 0.3386900 0.0140510 0.0169000 1.6871000 -0.3711000 -0.3147100 -0.3606800 -0.3606800 0.0420240 0.2621600 0.9348800 0.2604300 -0.0168410 0.0365120 0.6983900 0.3172700 -0.3931900 -0.3990800 -0.0708040 -0.4142100 -0.4305700 -0.7901700 -0.3919600 -0.4055000 -0.0587310 -0.0286440 -0.3798800 0.4139600 0.4139600 0.4139600 0.3047300 -0.4044000 -0.0264410 0.2059500 -0.0576540 -0.7605200 -0.0529360 0.4563200 0.3843600 0.0051359 -1.0509000 -0.3711000 -0.3665800 0.0272160 -0.3630600 0.0420240 -0.0167040 0.2621600 0.2604300 0.7113300 -0.0452280 0.3333500 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.089 0.452 0.414 0.305 0.139 0.139 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.089 0.452 0.414 0.305 0.139 0.139 8.3835803 13.8011669 5.0380366 10.0815801 3.2874723 12.4468492 2.0519637 3.9364966 9.0424055 10.1394371 7.6958303 10.2319369 6.5899387 9.7008158 9.5006465 4.3739057 7.8027458 10.1946704 8.4041027 7.8272677 8.7612966 7.8848641 11.4164457 2.0519637 8.7924038 10.3839247 4.1064237 NA 10.7352388 3.5214654 11.7160796 12.4383342 7.1097575 9.9994427 8.8711709 10.3437648 6.9625594 2.1588863 -1.6483717 1.3515153 8.7725475 9.0007907 8.1378042 5.5609870 10.1303591 6.5947083 9.7929225 7.5875488 9.7265739 0.3515153 12.9300252 2.1588863 4.3288149 9.5632342 6.9491777 4.8109674 9.8418840 7.3345281 7.0828537 8.5707031 13.1144875 -0.6483717 11.4950772 -1.6483717 5.8109674 5.0930023 8.2881726 8.8770552 11.0658874 9.5609879 7.6018332 12.2483399 11.1329844 10.9540015 7.5413592 11.7968081 9.5047129 11.0184243 12.7209956 11.8866884 9.5785487 8.1394373 0.3515153 8.1491958 10.2782012 11.894566 5.093002 8.410879 9.651315 7.264424 10.790721 5.743852 5.980891 10.904684 9.322359 5.980891 9.987253 9.109583 13.597050 10.607153 7.266219 10.106005 9.498103 6.058894 11.484595 9.087090 10.285594 9.794478 11.617296 11.003483 11.061265 8.065780 7.252401 9.053387 6.246353 10.202503 6.902281 11.072967 8.830304 7.829495 14.782493 9.959327 9.307911 12.932146 11.819395 10.296247 1.158919 TCGA-AN-A0FY 55 0 NA 10 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 NA 1 1 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 1.387189e-07 8.9850894 9.6342046 12.0909389 9.0568802 8.2465734 8.4170727 10.9999279 10.8613888 9.8727403 14.3040314 11.4183644 11.1025916 0.4443490 11.9644095 2.7074144 9.8198540 5.5981865 8.4101643 8.0142359 12.9935872 2.9804275 13.8152855 3.5818815 9.6674166 10.9636232 4.5818815 1.1224739 8.4147736 10.0979418 2.1224408 7.7353204 6.5941275 1.4444020 3.0293469 9.6674166 10.0766483 8.9249683 10.9476096 10.1743407 10.7902289 6.2973785 11.7395751 14.8828991 7.3161249 9.7599825 11.0864318 10.5289228 3.2099212 -0.8775261 9.1434319 10.2171895 NA 10.4731151 4.5818815 5.3798393 5.3319058 8.6072748 12.1723857 10.2955045 12.0219034 12.7257307 6.7149090 11.7420989 11.0867659 11.2327722 12.0250156 4.9168683 11.5455679 12.5714717 0.4443490 10.4055404 9.9119857 3.5624134 4.1885434 11.9104566 10.9121894 10.7799938 10.6087843 4.7806618 7.7390008 12.2031030 11.5937462 10.3810181 9.8580080 0.343230 0.343230 0.343230 -0.055061 -0.056038 0.389820 0.672150 0.371170 0.371170 0.421500 0.421500 1.179900 0.000000 -0.011321 1.734700 0.526780 0.526780 0.354470 0.354470 0.765610 0.806550 -0.534620 -0.507430 -0.508350 0.339180 -0.492870 1.843500 1.239300 3.656900 0.353370 0.343230 -0.049019 -0.058952 0.320440 -0.130180 -0.153240 -0.153240 0.371170 0.371170 0.371170 -0.345150 -0.346890 -1.078500 0.725670 1.754400 -0.494540 -0.041431 -0.011321 -0.066489 0.767530 0.526780 0.693670 0.928780 0.354470 -0.098023 -0.061958 -0.538960 -0.041567 -0.519180 0.386260 -0.547030 -0.508350 0.810310 -0.469610 0.202740 -0.110510 -0.485960 -0.519690 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.155 1.147 0.000 0.000 0.144 0.144 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.155 1.147 0.000 0.000 0.144 0.144 8.6032421 14.1418256 9.4432525 9.9322202 3.7663089 11.4835734 -0.2926519 1.1224739 8.6133029 9.1865211 7.5275935 8.1486433 8.5910761 10.5826520 8.8228917 6.4623027 7.1586258 9.5376657 8.2059315 10.5233315 9.4270373 8.6052599 11.1116691 0.9297910 8.4832991 9.2810618 4.6460128 NA 9.9095384 3.0293469 12.9301591 11.9459188 7.7645041 10.1465528 8.0517103 9.6247867 7.4147740 0.7074364 -0.8775261 7.4101647 9.1224519 9.6693464 9.1343781 3.9038096 5.9905964 6.7334764 10.0383314 6.8840032 9.8980623 -0.8775261 10.9285988 3.7948733 3.8503694 9.0977483 5.7363532 1.1224739 8.5685015 7.3245757 2.5147787 0.9297910 14.0755799 -1.8777911 11.3032936 NA 8.8435511 3.7948733 8.2886151 7.0678957 12.805432 7.963230 7.751808 11.964409 10.392455 10.532108 12.993587 12.035061 9.942132 11.048007 12.426447 11.951679 9.143432 8.489867 5.488775 8.135077 12.386015 11.1959242 7.5841771 9.1790898 9.9577130 8.5920937 10.8500790 6.0997328 9.7060050 11.4183644 9.5570803 0.1224739 6.1054455 9.7822919 11.9420324 9.9418329 9.0353413 10.8552554 9.6533460 4.0050945 12.7139715 8.9249683 10.3060874 10.0300938 11.5822678 9.3017392 10.5648772 9.3578680 0.1224739 9.6250502 2.2923695 10.4731151 8.2543092 10.4502853 8.6072748 8.2633711 14.1782005 10.4353350 10.5241316 11.8987823 11.0125263 10.2102464 1.8228933 TCGA-AN-A0FZ 45 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 4 NA 3 5 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 2.774378e-07 9.758677109 9.855892240 11.942271763 9.716154280 9.002872666 8.992220066 10.612157385 10.318418757 9.160877341 15.145256472 10.661175246 10.806685508 -0.990796173 13.653674419 3.053615323 7.772439289 3.764112567 8.625775315 11.582755491 12.697094343 2.653082953 14.231549853 0.331131922 9.002872666 11.648454253 4.963423259 -1.990796173 8.685183642 9.502081328 0.009203827 8.850004575 7.056350502 -0.405833672 4.501082408 9.978972808 9.619790069 9.077333004 9.977173292 10.333407185 11.224759614 2.764112567 10.746051291 14.209512225 9.434437246 9.235638755 10.746473928 11.505331386 3.179144757 6.169097218 9.350745410 9.554673838 -0.990796173 10.414368125 6.271321086 3.816579228 3.257161520 10.470194371 11.991061435 10.136898602 12.696547628 12.956635267 8.582873966 10.520237971 10.023100627 11.709666332 11.144294592 4.638583615 12.432079814 10.707714240 NA 10.311579972 10.057372828 2.180752571 3.468661510 10.241047775 10.674784587 10.779064495 11.161828366 0.331131922 3.867204595 11.897399082 9.828208220 9.858631771 9.545959491 2.282200 0.451900 0.451900 0.239690 0.137610 0.075259 -0.612580 -0.068665 -0.121040 0.930400 0.808110 1.984900 1.287600 -0.607290 -0.630930 -0.586180 3.656900 0.177840 3.656900 0.440120 1.672100 -0.183700 -0.838570 0.488200 0.488200 -0.312950 -0.328090 -0.328090 3.432400 0.028481 0.092025 -0.135100 -0.577430 0.108910 0.052852 -0.647800 -0.653610 -0.068665 -0.111420 -0.121040 -0.383920 -0.299920 -0.938870 -0.206850 -0.206850 -0.206850 -0.206850 -0.607290 -0.607290 -0.360010 -0.575350 -0.627280 -0.611620 0.177840 -0.410640 -0.368500 0.458200 0.052810 -0.183700 -0.473530 -0.838570 0.488200 -0.614790 -0.312950 -0.328090 0.245750 -0.385820 -0.552560 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 1.046 1.985 -0.207 -0.207 0.000 0.000 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 1.046 1.985 -0.207 -0.207 0.000 0.000 7.530826891 13.834259924 4.031598105 9.289417445 -0.434987819 10.340423516 -0.990796173 -0.990796173 8.334532076 7.662071594 NA 8.050721524 -0.405833672 10.645624661 9.341822786 4.031598105 6.671004578 8.961967930 7.867207684 10.843302554 10.024798509 7.301548323 11.400470206 1.468635446 8.490016900 9.202751957 1.009203827 5.517020522 11.245390364 0.594166328 12.084455044 12.443919990 7.735445004 10.090044122 6.977893511 8.903286574 8.336779229 0.009203827 -0.405833672 0.331131922 8.769946579 9.126869638 10.316427378 3.053615323 10.422113977 6.096689858 9.659829679 5.797129738 10.237744746 NA 9.622095210 1.594166328 4.331153425 9.548947681 5.169099223 NA 9.521967054 7.561895830 3.963418635 -0.405833672 13.687881774 -1.990796173 11.097352303 NA 5.418618374 5.238045454 7.755740844 7.317565468 12.738210 5.764115 8.590427 13.653674 10.419227 9.997556 12.697094 13.628702 11.496871 10.843105 12.266099 10.059756 9.350745 8.409039 1.709688 7.759096 13.437914 10.7570000 6.3842657 9.6891464 8.6063482 8.7515360 10.6202376 5.1177491 8.6930984 10.6611752 5.8918687 4.3490751 8.6230160 8.2864210 10.5018309 9.6873865 7.4143681 8.9757322 11.3401435 2.1791607 11.2158778 9.0773330 10.2885471 9.3929309 12.1975836 10.1046236 10.4090386 9.4809019 2.5327907 8.9596731 2.0092397 10.4143681 7.4563101 10.5333814 10.4701944 7.7150319 13.3662631 10.2786455 9.8953041 12.1396363 9.7443596 9.8815167 0.5941663 TCGA-AN-A0G0 56 0 NA 16 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 NA NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 8.669932e-07 1.387189e-07 10.1709025 9.4528866 12.2681499 9.7960179 8.2476883 9.1044693 8.8200752 10.6276973 11.3027928 13.3726321 10.3763749 10.7125481 NA 12.5567600 4.2067682 10.9249339 6.1243054 9.5321270 7.6661999 10.3664792 NA 9.6878948 3.5148923 8.7362917 10.8446579 2.4774183 -1.7705351 7.9471302 10.3610235 0.8144274 8.7598945 8.9316606 NA 5.0874671 8.3906200 9.7183323 9.1423774 9.8186710 10.0038633 11.7867124 9.6404693 8.9935303 15.6977700 7.6449976 9.5183542 11.2236647 11.6835303 3.9019095 -1.7705351 9.0239040 11.0506641 -1.7705351 11.1874970 3.3994172 5.2518554 5.7052204 9.8583892 11.9256949 9.0781110 11.4120376 12.8272497 8.4821533 11.2854483 11.0355120 11.1468601 11.5740614 4.9159893 11.4663992 5.6473404 -1.7705351 9.6309009 10.0800656 3.0904470 3.7530482 8.7273399 9.6325002 9.9142367 9.9484490 -1.7705351 3.4389448 12.6624214 10.4186949 10.1945508 9.9620795 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.9743217 13.3916040 6.5469006 9.4149830 1.6889412 11.3409498 -0.1855726 -0.7705351 9.1639161 6.7647628 NA 7.2361510 1.8144684 11.0263388 9.3912498 2.3169567 5.2955761 12.0422670 10.1010084 9.3683997 9.9522316 7.3169512 12.5259741 2.3169567 9.4248602 10.0050983 0.2294649 NA 10.0544468 6.3587707 13.2690497 13.2630401 7.2546281 9.9654671 8.4031650 9.5974489 4.7052204 1.2294649 0.2294649 NA 8.5137339 9.6950544 7.8125707 -0.1855726 9.3581397 5.8877007 9.3581268 7.7372825 9.9976723 3.9843797 11.5570407 0.2294649 5.1363801 9.5622630 6.4612371 6.3893586 8.8312588 7.8983728 7.7725198 NA 13.4134335 NA 10.8347361 NA 12.0647490 7.3380125 7.4118821 7.5782164 12.260069 7.356192 8.795542 12.556760 9.190279 11.447900 10.366479 11.476822 13.139519 10.730330 12.758308 10.733065 9.023904 8.431612 1.229465 7.409397 11.396122 10.846726 5.399414 8.502118 9.166126 9.771553 9.398248 5.638879 3.621806 10.376375 1.814468 5.894825 10.058814 9.649206 13.977681 9.587590 9.134123 8.971798 9.214619 6.887700 10.011290 9.142377 9.618582 10.313964 12.001390 10.247688 10.285787 10.465203 NA 10.368294 7.139381 11.187497 6.912482 10.050864 9.858389 8.598158 13.641462 10.199953 10.794590 12.802425 11.852684 9.645758 1.814468 TCGA-AN-A0XL 61 0 NA 163 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 1 3 NA NA 3 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 10.413052 9.972847 11.882350 9.251912 9.085967 9.243919 10.178796 9.450192 9.503982 12.975263 11.255450 10.480364 2.974456 13.395220 3.582146 9.243028 5.536336 9.009454 9.190396 12.721772 1.167101 12.631734 3.389498 9.054527 10.909974 6.885922 NA 8.815760 9.292086 3.904070 7.279108 7.282581 -1.417733 4.752063 9.997354 10.316427 9.045665 11.529960 10.289931 11.439344 5.151997 11.317697 14.753513 9.042197 10.479986 10.962061 11.079743 5.415032 0.167101 9.675558 11.676053 NA 11.488468 6.337028 4.791595 4.363501 10.114009 11.943536 9.913618 12.151522 12.787858 8.134810 10.946823 10.788731 11.374728 11.119844 5.008406 12.384152 9.417402 -1.417733 10.107662 9.706908 3.139191 4.690663 9.794637 9.836579 10.269954 10.723609 4.167101 9.680831 13.028578 12.549277 9.848342 9.567271 -0.00401620 0.78273000 0.51126000 -0.00373950 0.49573000 -0.00415460 0.80986000 -0.00857660 -0.00857660 -0.46929000 -0.00650500 0.81103000 0.00000000 0.00000000 0.40111000 0.40111000 -0.46142000 -0.01023200 -0.01340200 -0.45811000 -0.00581400 0.00000000 -0.46515000 0.40611000 0.40611000 -0.02013800 -0.02013800 -0.02013800 0.41881000 -0.00401620 -0.00401620 0.00027728 -0.00373950 -0.00415460 0.00000000 0.80908000 -0.00539920 -0.00857660 -0.00857660 -0.00857660 0.41580000 0.41580000 -0.46334000 -0.00069303 -0.00069303 -0.00069303 -0.00069303 0.00000000 0.00000000 0.40111000 0.40111000 -0.46142000 -0.46142000 -0.01023200 -0.01340200 -0.01340200 -0.45811000 -0.00581400 0.00000000 -0.47259000 -0.46515000 0.40611000 0.00819590 -0.02013800 -0.02013800 0.41881000 -0.00543130 -0.00235530 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.286 -0.133 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.286 -0.133 8.7101352 12.2209160 5.1213014 10.0052567 1.9040794 10.7611168 -0.4179258 1.5821224 9.0094536 8.9915318 NA 8.8400471 5.5363358 9.8241239 9.5069532 2.5821465 10.7492452 9.7558179 9.6265348 10.0624260 9.9448298 8.3100610 12.6313086 2.0415584 8.3049481 9.8151612 5.2114990 NA 10.7851828 2.9040601 12.2787823 12.3765566 9.7657761 10.2817132 7.7818128 8.7928121 5.4525065 1.7520635 -1.4177330 7.9999932 8.4799863 9.6636241 10.9023771 6.8157599 8.1563749 5.5821405 9.5128781 6.7165671 9.8916171 1.1671010 11.5576305 3.1056948 4.5821405 9.9166655 6.9611730 0.5821706 9.5572722 10.2367767 6.2895007 -1.4177330 13.6350059 1.1671010 9.8927535 NA 6.9175308 6.6100474 7.5450370 7.9440848 13.622191 4.337026 8.816958 13.395220 9.966924 9.937492 12.721772 12.630883 8.391105 10.779050 13.793763 11.435060 9.675558 8.236777 1.167101 8.180193 11.245476 11.1386468 6.3830407 8.8640707 8.4070995 9.0799927 10.5488156 5.7318892 6.5305078 11.2554498 6.1968509 4.3370260 7.5594207 6.4058256 10.9525557 9.9962974 8.3083591 8.6854286 11.5565553 5.0899345 12.9597512 9.0456652 10.5128781 10.3403640 10.8568100 10.4924087 10.5279503 8.5651345 -1.4177330 8.9778354 3.8300727 11.4884677 6.0167682 10.4946559 10.1140095 7.3830407 13.6210169 9.6121180 10.0619210 12.6420766 10.4939072 9.7854888 0.9040409 TCGA-AN-A0XN 68 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 3 4 2 2 2 2 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 2.947777e-06 8.669932e-07 10.0833882 10.0860354 11.1089931 9.7419538 8.3142724 8.6166518 9.4208647 10.4045213 10.5506270 12.2836102 10.2666465 10.4530067 NA 11.3650150 3.9487971 10.4013365 5.9487971 8.8999870 9.7208181 11.5337588 NA 12.2772541 4.4864505 9.2960962 10.1050834 4.9487971 0.9945797 9.6248671 10.4581244 2.9014945 9.0754176 9.0430869 2.1645289 4.6950417 9.4814350 10.1238830 9.6863435 10.6701161 9.9223779 10.9988205 NA 10.4182412 15.7209645 9.0082717 9.1682772 11.1395769 11.8488840 4.3869144 3.9487971 9.6000796 10.6915676 NA 11.4287069 7.1844241 7.4944460 5.7360663 10.3422214 11.6184815 11.1964176 12.5042513 13.2280699 8.3847691 11.5009076 10.7707780 11.7101331 11.2285192 3.9945978 12.6594917 10.6023927 -1.0054927 10.6661411 9.7088456 2.9955026 6.8019553 10.8871428 9.9675798 10.0559712 9.9319739 5.4208664 8.8463491 13.7874411 11.6985036 9.9868303 9.2742106 0.0162860 0.5189100 1.2616000 0.6092100 0.2993100 -0.0900270 1.3683000 0.1807100 3.3893000 3.6569000 3.5500000 0.9150100 0.3938000 0.7629300 -0.0019399 0.5020300 0.3573800 -0.3428500 -0.0179410 -0.3395200 0.6137100 -0.3332900 -0.2946100 0.0246890 0.0246890 0.3492500 0.0479780 0.0199230 0.6542400 0.0210430 0.0162860 0.5016800 -0.1015800 -0.3927400 -0.0344950 0.3565900 -0.7766000 0.1807100 0.3063300 -0.3783100 0.0715350 -0.3863800 -0.4165200 -0.4999600 -0.3774100 -0.0322200 -0.3280900 -0.3986400 -0.3436600 -0.7240300 0.5020300 -0.2995700 -0.2903500 -0.3581800 -0.0179410 -0.3498500 -0.2434600 -0.3524800 -0.3368400 -0.3096800 -0.2946100 0.0246890 -0.3971900 0.3492500 -0.0142280 0.0198290 0.1177000 0.1090600 -0.344 -0.344 0.000 0.000 -0.340 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.340 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 0.000 9.681100462 14.970336049 8.307483172 10.205879980 NA 10.015579942 -1.005492684 -1.005492684 8.176994391 9.200393267 NA 9.338052194 4.722520671 10.573915916 8.798730993 2.316522300 8.014190682 9.567300156 9.112243224 8.729309740 8.830224262 7.213768168 11.953877522 3.518157421 7.649236055 9.892445521 0.579566360 NA 10.189972279 3.386921282 12.731424705 12.328733599 7.433391817 10.373436694 9.801149600 8.846349140 5.994600088 3.518157421 NA 2.994597826 8.022505972 8.358734706 8.877243023 2.579566360 6.941915017 6.977593618 8.679348492 7.677594920 9.469319871 0.579566360 10.172642397 4.801955334 4.082063861 10.058911723 5.734717748 -0.005347871 10.121304533 9.218601740 2.164528861 -1.005492684 13.839256746 -1.005492684 10.343328201 NA 10.308050007 4.242526292 8.585187153 8.861878775 13.040871 6.184425 8.057995 11.365015 9.741954 10.942237 11.533759 11.921822 9.416665 10.721670 13.006875 10.907115 9.600080 8.682850 -1.005493 7.352152 11.191202 11.058669 6.729309 9.129026 8.506353 8.167028 9.675452 6.736066 3.994598 10.266646 7.334450 4.454031 7.466276 7.261667 12.812583 10.375602 7.970820 7.425052 12.762060 4.123881 10.988168 9.686343 10.222817 9.851804 10.570139 10.221012 10.451981 9.291516 5.316530 8.924909 3.695036 11.428707 10.500412 10.082726 10.342221 7.656378 14.170695 10.188125 10.421389 12.831341 10.732692 9.553021 NA TCGA-AN-A0XO 59 0 NA 375 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 5 3 3 3 3 1 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 9.5888917 10.2531174 12.3211365 9.5690513 8.5095276 9.1190376 10.6129217 9.4666975 9.7186767 13.3208559 11.3544891 10.7339282 -0.2297207 13.3475417 4.1853433 9.9687546 6.5776645 8.4380125 9.8165240 13.3433650 3.0922413 13.6366548 7.9064463 9.3675862 11.7260805 6.6406744 NA 8.1219852 11.0697084 1.6447792 7.0433281 8.6053073 -1.8145140 4.0922413 9.9568366 10.5655375 9.4093487 12.5040311 10.2684939 11.4772372 3.2297417 11.6137072 14.9078478 8.5440313 9.2807441 10.8289778 11.2087549 4.2728070 5.1965756 9.4129629 12.6755712 NA 11.8964762 5.6931412 3.5776584 4.2514389 9.8137926 12.4198651 11.1162692 12.8150452 12.8029867 8.4201645 11.4129630 11.0351665 11.4553503 11.3317566 5.3042883 13.6524431 12.2069343 1.3552982 10.5010627 8.9568364 2.1862470 1.3552982 10.2321300 9.4620531 9.8480154 9.9435702 4.5947396 10.7235360 13.5296083 11.5717485 10.4681460 9.7089090 -0.6267600 0.5607800 1.1737000 0.1716400 0.7696100 0.0109610 0.5766300 -0.0220790 -0.0220790 1.1558000 0.1755600 0.3724600 -0.0579440 -0.0579440 -0.0510660 -0.0510660 -0.0510660 0.2192700 0.2192700 0.2073000 0.0459700 -0.1079000 0.0811560 0.0811560 0.0811560 -0.0231750 -0.0231750 -0.0231750 0.1042200 0.0042812 -0.6267600 -0.0252300 0.1716400 -0.6038200 0.0000000 0.5766300 0.5766300 -0.0220790 -0.0220790 -0.0220790 -0.0268710 -0.0268710 -0.6477300 -0.1062000 -0.1062000 -0.1062000 -0.0762990 -0.0579440 -0.0257770 -0.0510660 -0.0510660 -0.0510660 -0.0510660 0.2192700 -0.4277900 -0.4055200 -0.5960600 0.0589160 -0.1079000 -0.5300300 -0.6498800 0.0811560 0.2057700 -0.0231750 -0.0231750 0.1042200 0.0577750 -0.5444300 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.139 0.139 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.544 0.000 0.000 0.172 0.172 -0.604 0.000 0.577 0.577 0.000 0.000 0.000 0.000 -0.604 -0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.139 0.139 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.544 0.000 0.000 0.172 0.172 -0.604 0.000 0.577 0.577 0.000 0.000 0.000 0.000 -0.604 -0.462 0.000 0.000 0.000 0.000 7.6951218 13.3615202 7.1937757 9.9276565 NA 11.0284830 NA 1.8857696 8.4415557 8.2118703 0.5073126 8.5633599 4.2077133 9.9621913 9.4033048 2.7703005 6.9765103 9.2494162 10.1475200 10.9522900 8.8105810 7.4868431 11.4162681 -0.3817613 8.7991365 9.6000322 2.8292001 NA 10.5340752 3.3948022 13.4227811 12.1936006 7.1568911 9.9335399 7.3223383 9.3757890 5.2187695 1.1853591 -0.2297207 6.2187695 8.3401652 9.1690534 10.3822564 2.0922413 9.3701418 7.0087143 9.7656057 6.8927067 9.5173836 -1.8145140 11.3734722 2.1853591 3.5072745 9.9824289 7.4754351 0.1853591 10.2194582 6.5162642 4.6282895 0.9926959 14.4786211 NA 10.0394362 NA 7.9251277 4.2728070 8.1042103 9.3268155 13.791204 5.507275 8.755203 13.347542 10.141723 11.303964 13.343365 12.667777 9.467856 11.098049 13.465973 9.364012 9.412963 10.281733 NA 7.389918 11.695740 11.2085816 6.8255923 8.4415557 8.9975244 8.6861888 10.4915056 3.8000612 7.3452181 11.3544891 6.7245057 4.2938707 7.4497900 6.9325998 12.1397251 10.3646341 8.9568364 9.1190376 12.9445591 2.2727996 11.9097138 9.4093487 10.2534535 10.1245590 11.4898410 11.2012847 10.6946272 9.3068806 10.0158623 9.3425676 2.6447792 11.8964762 7.4959597 10.2297411 9.8137926 7.6408183 13.7212603 10.2588192 10.6836977 13.3402838 10.8595393 9.4793933 -0.2297207 TCGA-AN-A0XP 69 0 NA 9 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 5 5 3 3 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 10.22611013 9.85092550 11.79888588 9.68219298 8.39788423 9.63571522 10.96763861 9.46506107 10.65108632 13.97814026 11.18346387 10.50774371 0.36311499 13.21033856 3.85494316 9.17686652 6.12463625 8.01234184 10.29308351 13.59201681 -1.63710936 14.23624112 6.10455263 9.02930932 10.81892635 7.75110281 -1.63710936 10.42984733 9.58225397 -0.05199728 6.28789703 6.92150655 NA 3.88664769 10.31582670 10.18963396 10.27035163 11.96717527 10.17526273 11.83818551 -1.63710936 11.36149955 14.51649891 7.96552458 9.19597549 11.21620002 11.61441990 3.26997568 -0.05199728 8.96485633 12.94021916 -1.63710936 10.68501356 4.51283368 3.68500944 4.14444616 10.46374771 11.68951491 9.98742391 12.07550495 12.68388597 7.91575452 10.08631977 9.75593942 11.07216926 10.98833767 5.09100582 11.76449831 9.48656013 NA 10.21053437 9.00964418 3.57292604 4.57253804 10.15424826 10.45253593 10.31837209 9.78515017 2.94804011 9.19042819 12.42723872 11.28474043 10.16842630 9.21170825 -0.34400000 0.89708000 0.89708000 0.01321300 0.01000100 -0.30569000 0.01279500 0.00027728 0.00898790 0.00000000 0.00000000 0.00000000 -0.31541000 -0.30094000 0.00013863 0.00013863 0.00013863 0.00041593 0.00041593 0.01377200 0.00221930 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10.29704900 5.19597352 8.34892729 11.18346387 7.34322481 -0.05199728 4.24573143 6.30964005 10.74678973 10.25714525 9.03727761 8.09610053 13.53687965 2.06353746 10.99591933 10.27035163 10.83552243 10.01234156 11.21580999 9.41497417 10.98788090 9.46111760 NA 9.38404462 2.36308695 10.68501356 7.33175179 10.37011272 10.46374771 7.10117731 12.40243291 10.18804418 10.62987195 13.50734534 9.81892627 9.82763121 1.68499822 TCGA-AN-A0XR 55 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 7 white not hispanic or latino 5 5 2 3 NA NA 1 1 3 5 NA NA 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 10.0236518 8.8829361 11.8446925 8.5505479 8.9592088 9.3855850 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5.9544080 NA 5.8445313 7.1634665 8.9532053 10.0825914 6.2801787 9.9411222 11.9044097 2.1850102 11.9898471 8.7071565 11.1429144 9.9405155 11.5716672 9.3161763 11.0779086 8.7396098 0.7256103 9.8197593 1.8954965 10.9110842 9.1911557 11.4074864 9.7135637 7.3292160 13.0961404 10.9483842 10.6169933 11.8503568 10.7930236 10.0587445 1.3105728 TCGA-AN-A0XS 63 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 8 2 2 3 3 1 1 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 10.368989 10.032723 11.494445 9.417042 8.767526 9.380003 10.395494 9.543780 10.105170 12.987094 9.095287 10.555110 1.708982 12.844061 2.293959 9.970148 3.972031 8.663189 10.051512 13.119232 2.474540 13.139655 1.708982 10.429179 11.802675 2.779386 NA 10.068251 9.715179 2.387059 7.406656 7.223116 NA 6.699947 9.237252 10.020968 10.567596 12.088588 9.926708 10.996705 3.030919 12.272380 14.879419 8.364001 9.892380 11.783803 11.294894 4.219958 -1.613079 9.073565 12.652460 2.387059 10.929129 6.317802 6.425985 5.128533 10.395844 11.694693 10.350684 13.272285 12.868738 8.043490 11.102383 10.734418 11.016649 11.149032 4.672465 12.052512 10.968265 NA 10.551029 9.648572 2.407652 5.986977 10.912830 10.757480 9.841364 10.819607 5.615884 9.655022 12.803401 11.448098 9.861278 10.049733 -0.208740 -0.208740 -0.207130 0.022259 0.022259 -0.265680 0.023521 0.010956 0.017499 -0.647160 0.931960 1.445200 -0.272160 -0.272160 -0.279090 -0.279090 -0.279090 0.023714 0.023714 0.028717 0.019447 -0.283300 0.052053 0.052053 0.052622 0.043536 0.043536 0.043536 0.051484 -0.180720 -0.208740 0.001342 0.022259 -0.265680 -0.271690 0.023521 0.023521 0.047506 0.017499 0.017499 -0.286270 -0.293360 -0.647160 -0.281120 -0.281120 -0.281120 -0.281120 -0.272160 -0.272160 -0.279090 -0.279090 -0.279090 -0.279090 0.023714 0.023714 0.033363 0.028717 0.019447 -0.274130 -0.615420 0.052053 0.052053 0.043394 0.061890 0.043536 0.051484 -0.262800 -0.257850 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 -0.647 0.798 -0.281 -0.281 0.000 0.000 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 -0.647 0.798 -0.281 -0.281 0.000 0.000 9.43009225 13.80547754 5.77076827 10.01960574 4.29395898 10.26166209 3.24503923 -0.61285807 8.25742980 8.41358816 -0.02796912 9.07531522 3.59651777 10.18553667 9.32222990 2.29395898 9.04438346 8.78473953 9.29620799 10.68941824 8.86390222 7.88092057 11.07203262 2.84649332 9.79114205 10.04527641 4.34125995 NA 10.96047537 2.84649332 12.40064927 11.85250372 7.38424412 10.21876797 8.05417667 9.62128358 7.30294411 1.97203088 NA 2.08749679 9.55636350 10.11965627 9.82585669 5.28188367 7.82035833 6.80069286 10.49983014 5.65385110 9.70164816 -1.61307872 11.22390426 6.85467019 3.74461321 9.44253716 5.03826058 8.32664430 9.72969517 9.11328298 10.27428554 NA 13.71272169 1.19440229 10.39268943 NA 8.61708539 5.48509832 8.15690269 8.63380535 12.40029333 4.47452690 8.55071447 12.84406092 10.30961959 9.95692046 13.11923231 12.46613294 9.16349798 10.76725537 12.55063593 8.50210859 9.07356534 9.16842467 -0.02796912 7.74021184 11.35339007 10.9392536 7.3814184 8.7566621 9.6805366 8.1030271 10.4187660 7.6086518 8.4625440 9.0952865 5.9569209 0.3870316 6.3118773 6.6422828 10.7221760 10.6341023 9.3207554 8.6158834 11.8026746 8.3514057 11.1073177 10.5675956 10.6605691 9.8561978 11.1804650 10.0634628 10.2943311 8.9262236 -1.6130787 9.7166034 9.0209683 10.9291294 7.8648231 10.5418830 10.3958436 6.7621043 13.5382797 10.1335792 10.3077900 12.8934964 11.0512899 9.6403214 3.4314625 TCGA-AN-A0XT 54 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 4 1 3 5 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.427581e-07 2.427581e-07 10.003259 10.116916 11.435926 9.005077 8.830147 8.665170 10.712674 9.594474 9.866604 14.169575 8.379576 10.789231 NA 12.069629 3.831512 8.060915 7.302819 8.183724 7.708960 13.582652 5.278973 14.350673 7.708960 9.256761 10.629470 6.356975 NA 10.090329 7.678903 2.246560 7.518438 5.809486 NA 5.487560 9.639649 9.847815 9.815025 11.908005 9.806015 11.341229 3.874581 12.288583 13.916845 6.311231 10.424197 11.142746 10.120275 3.787119 5.916403 9.729634 11.870599 -1.212902 11.373021 4.246553 4.764399 3.430981 9.488426 11.887289 10.446223 11.774916 12.726331 8.362659 10.365964 10.293645 11.310436 11.084322 5.126969 12.423178 12.944466 NA 10.202861 9.043328 4.753594 3.645102 10.790286 11.096880 11.113830 9.942570 3.916400 9.313619 12.075120 11.257270 9.481477 10.375366 8.3195e-04 8.3195e-04 -2.7707e-03 -7.6371e-05 7.5166e-01 -8.0169e-01 9.1705e-03 2.0805e-03 2.0805e-03 7.8099e-01 -6.3668e-03 -6.6460e-03 0.0000e+00 0.0000e+00 7.1999e-01 5.9700e-03 5.9700e-03 -2.2834e-02 -2.2834e-02 7.9026e-01 5.8309e-03 2.9133e-03 1.3961e+00 -7.8058e-01 -7.8058e-01 7.3303e-01 6.1090e-03 6.1090e-03 5.1359e-03 -7.8134e-01 8.3195e-04 -3.8593e-01 -7.9745e-01 -8.0169e-01 -8.0169e-01 9.1705e-03 9.1705e-03 2.0805e-03 2.0805e-03 2.0805e-03 -1.3953e-02 7.5000e-03 -8.0782e-01 6.0569e-04 6.0569e-04 6.0569e-04 8.3351e-03 0.0000e+00 0.0000e+00 -7.9344e-01 5.9700e-03 -7.9285e-01 -7.8522e-01 -2.2834e-02 -2.2834e-02 -9.4046e-03 -8.0269e-01 -7.9686e-01 2.9133e-03 -7.8606e-01 -7.8311e-01 -7.8058e-01 4.8120e-02 -5.1721e-02 6.1090e-03 5.1359e-03 -8.1269e-01 -7.8319e-01 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 -0.263 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 -0.263 7.7354870 11.8255241 4.0725175 9.7252287 NA 11.8164067 1.7871399 -1.2129019 7.7899346 9.1933245 -1.2129019 8.0725217 2.8745806 9.5528199 9.8949904 NA 7.4453311 10.5188627 10.7821799 10.0777143 8.8681101 8.0931809 11.8820219 1.7871399 9.3349780 9.6689981 4.1794394 1.3720606 9.5141889 1.3720606 13.2402614 11.3167940 9.3569750 10.6709082 7.6419881 9.4613116 3.4309810 3.3106746 -1.2129019 -0.2129019 8.5782825 8.9099474 11.0433281 5.5420073 3.8267010 7.3531733 9.3136186 6.9469905 10.6204049 -0.2129019 10.1479665 1.5944530 6.7814725 10.0484034 5.0861426 4.2133862 9.5807227 8.6326096 6.9965729 NA 14.3706430 0.7870981 10.3659638 NA 8.7658298 6.9317776 7.9368664 7.9419373 13.265155 3.109043 7.770113 12.069629 10.766187 10.078290 13.582652 13.947897 9.275964 10.897603 12.554994 10.922187 9.729634 7.929226 3.310675 6.758663 11.874251 11.145496 7.140266 9.011121 9.325308 7.379577 10.983383 4.764399 6.681937 8.379576 7.770113 NA 4.741316 6.254889 11.397221 10.564375 6.820543 7.170823 12.747574 5.109047 12.147913 9.815025 10.355076 9.622380 11.796248 9.785005 10.657099 8.412828 NA 8.258754 5.946990 11.373021 5.278973 11.195715 9.488426 7.238330 13.765830 10.224351 9.853209 11.967961 9.345540 10.121393 3.109043 TCGA-AN-A0XU 54 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2.358222e-06 5.895554e-07 9.1247306 9.6863508 11.3573913 9.8444955 9.0127371 9.6766643 9.5039271 10.7627329 11.0175414 12.2365038 9.8488149 10.6101574 -1.5370054 12.4326987 2.1634021 9.2253345 6.3995898 9.5411032 9.7684442 4.4629554 NA 8.7781021 7.6253436 9.3877649 11.5178959 4.8723412 0.4629946 10.0374419 11.1311727 4.2958406 7.6177708 8.1651251 -1.5370054 5.8379912 9.5303868 10.5623002 8.8871188 9.2077862 11.5509125 7.9786521 1.0478873 9.5831904 14.7639663 8.8982997 8.9386860 10.8125102 11.6633914 4.1068089 -1.5370054 9.3516957 10.9001844 -0.5370054 10.4323391 6.9507927 7.4430919 6.1633921 8.4258487 12.0477976 9.3683395 12.3596633 13.5069196 6.9264763 10.7755518 10.7879403 11.6974706 11.4352143 5.2178395 12.4565985 9.1993543 -1.5370054 10.7108800 9.7238720 3.6727987 3.6328731 10.2451317 10.3641965 11.2735241 9.8369051 6.5073459 8.7837529 12.5292099 11.8496233 10.1780565 9.4713812 0.1108600 0.7202400 0.0275430 -0.0023107 0.1708100 0.6383400 0.3368000 -0.3746700 0.8949400 -0.6412000 0.0674210 1.3372000 0.9160300 -0.1938300 0.6585400 -0.6757500 0.5335000 0.2664500 0.0822340 0.2869600 -0.1916100 0.3493000 -0.3370600 0.2027900 0.1951600 0.0500120 0.6546700 0.0101900 0.0881600 -0.3156000 -0.6528300 0.0604110 -0.6535800 -0.6636200 -0.2169300 -0.6705500 -0.6705500 -0.3451100 0.8949400 0.6119600 0.0000000 0.6379800 -0.6853500 -0.0352760 0.0030969 -0.6606500 -0.6485300 -0.9207500 -0.5003400 -0.6229000 -0.6670400 0.1323300 0.0800700 -0.5410500 0.0312000 -0.6626800 -0.3400600 0.0945380 0.7574500 0.7401100 -0.6812900 -0.3552700 -0.3550600 -0.6566500 0.0101900 0.0154920 0.0777650 -0.2263200 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 -0.113 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 -0.113 7.68936486 12.97902181 5.04791350 8.91930701 4.93868570 11.21930032 0.04795711 2.04792222 8.40253161 8.10500438 4.76673296 10.39347551 4.74835389 10.65647787 9.29425980 5.48532055 4.69176864 9.60888463 7.02519494 9.95730813 8.39950224 8.40546699 12.63834608 2.27031962 8.09048615 10.05260364 0.78483897 -1.53700539 9.50392708 4.19087556 13.12651059 12.53282178 7.90796741 9.95530641 9.88974138 10.42945790 5.16339407 2.04792222 0.04795711 5.93055758 8.63787828 8.04415310 7.13537788 9.42295450 8.92925338 7.08500392 10.39590542 8.19087310 11.12784418 5.03280615 13.47361170 2.27031962 6.90589600 8.57158163 7.06732034 7.58965714 8.57799598 8.33946924 8.24922204 9.03470516 13.84317678 NA 10.62187770 NA 9.67240589 2.98652016 8.69056830 7.17719826 10.545611 8.115797 8.890265 12.432699 10.071549 10.847197 4.462955 7.378832 10.180119 11.719898 13.191989 11.177842 9.351696 8.420055 1.632873 8.219509 10.671187 10.246769 6.032808 8.192573 7.088661 5.149454 9.244566 6.451636 5.652776 9.848815 10.517557 2.270320 6.807248 10.054358 13.274227 9.375093 8.462614 7.652777 9.321711 7.732079 10.880776 8.887119 10.340237 9.259803 12.714731 10.040853 10.337934 10.059142 5.345595 9.425899 7.759869 10.432339 8.032808 10.332932 8.425849 8.416087 13.028471 10.595131 11.327912 13.359379 10.595452 9.012737 8.341003 TCGA-AN-A0XV 67 0 NA 162 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 7 white not hispanic or latino 5 2 2 2 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 10.84162465 10.17648784 11.65113176 9.23066200 8.32073287 9.50509459 10.30690062 10.19763138 10.22057906 13.85234395 11.19977159 10.80778831 4.15237815 12.07975163 3.83750936 9.50440210 6.73734335 8.54738929 11.22394781 13.16453925 1.80190361 13.67744046 4.23484617 9.66843261 11.07847281 7.42832248 0.06488285 9.37021922 12.07649419 2.72787690 7.82425106 7.21466494 2.18040251 5.99565410 9.80638448 10.46045160 9.96578428 10.92238014 9.96477780 11.19505896 3.64987983 12.00265910 14.69552589 8.27503685 9.55876623 11.54469774 10.98774961 4.52435209 4.66978081 9.33092315 11.28428769 NA 10.97130708 5.93116535 6.07986874 4.23484617 10.09512481 11.93155247 10.12155514 11.76333277 13.02195905 7.43123934 11.02032523 10.62754784 11.51320588 10.81674049 4.66978081 11.71850899 10.61950637 0.06488285 10.00840915 8.79397162 3.33892353 4.98774834 10.81785561 10.25103166 10.18601925 12.44276063 3.68941099 9.14529100 13.44542364 11.95695424 8.84846145 9.33404418 0.02084500 0.02084500 -0.00573240 -0.00088838 -0.00088838 0.00535690 0.00271760 -0.00476140 0.00000000 0.66578000 0.52916000 0.21938000 -0.00434960 0.00221470 0.00077513 -0.00952590 -0.00952590 0.00368960 -0.00656160 -0.49972000 0.00119120 -0.00324260 0.00008183 0.00008183 0.00008183 -0.01662300 -0.01662300 -0.01662300 0.07466200 0.02084500 0.02084500 -0.00199660 -0.00088838 0.00535690 0.00306160 0.00271760 0.00271760 -0.00476140 0.00000000 0.00591300 0.05745200 0.05616900 -0.58180000 -0.50592000 -1.01420000 -0.00241200 -0.52250000 0.00221470 0.00221470 0.00077513 -0.00952590 -0.00476450 -0.00476450 0.00368960 -0.00711420 -0.00711420 -0.49156000 0.00119120 -0.00324260 0.05745200 0.00008183 0.00008183 0.02421000 -0.01662300 -0.01662300 0.08313900 0.01134300 0.01539000 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 9.11748545 12.78387840 8.19420035 9.45938018 4.48535598 10.52878237 2.47995483 1.93937705 8.20787529 8.60148853 NA 8.48013827 3.90621718 10.11839088 9.23317170 1.64989133 10.51715875 9.42246955 9.06491760 9.86095706 9.43392589 7.67471204 10.95213806 1.80190361 10.42539877 9.77572385 4.68941099 0.06488285 10.02395349 3.28730975 13.22971967 12.37059925 8.76882115 10.51784504 8.93013530 9.12831248 2.80188293 1.28729498 -0.51994173 -1.51994173 8.81311034 8.91978579 10.85906253 6.16645636 7.81015451 6.93528176 10.64329018 7.22142182 9.87227241 NA 12.98849257 2.80188293 5.57798767 9.98915590 6.05806318 6.15943544 9.95213813 8.17865987 8.04981044 0.47995483 13.98263141 1.28729498 10.68330301 0.06488285 9.26458991 5.83750684 8.53659264 8.73852095 13.55595465 4.58848079 9.20361596 12.07975163 10.19591694 10.76506817 13.16453925 11.78030756 9.27923657 10.73586873 12.99380592 11.86257901 9.33092315 8.29853735 0.06488285 7.08728568 11.33131362 10.661107 6.951630 9.031663 9.098341 8.356472 9.212106 6.145290 8.450061 11.199772 5.756079 3.689411 4.669781 7.080723 11.099487 10.498155 9.091902 7.916667 12.195381 6.718360 12.639476 9.965784 10.392844 9.822585 11.831722 9.792838 10.539975 9.076145 5.931165 8.999493 7.398818 10.971307 7.548733 11.095104 10.095125 7.131007 13.830376 10.551417 10.853364 12.417605 9.684526 9.765935 3.524352 TCGA-AN-A0XW 36 0 NA 170 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 3 1 4 1 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.583437e-06 1.699307e-06 10.1091181 10.1472311 11.4408712 8.8988704 8.5863181 9.7207653 9.1896593 10.5848573 10.0526362 13.6274785 11.2590871 10.7147666 -1.3621579 12.1452501 3.7672310 9.5205941 5.7672337 8.5236474 8.6932336 12.8095187 -0.3619725 12.8393857 2.5448316 9.4184662 10.2462058 8.3521966 0.6379348 9.6237930 10.2229135 3.7672310 7.2961628 8.1886976 -0.3619725 5.4834418 9.6999971 10.7425498 9.2609179 11.4801049 9.4428886 11.0534287 0.2229282 10.5002009 15.0611818 7.9935442 9.4881378 11.4891144 10.6813201 5.2818058 2.9598814 9.2294733 11.3762544 -1.3621579 11.5653586 5.9047370 7.9910978 5.5568156 10.5627635 12.0521077 10.0704929 12.1943373 12.9803035 8.6754980 11.4170548 10.8116281 11.4191057 11.4335848 5.2961637 12.4354099 12.2354217 1.2229282 10.2818072 9.0324136 2.5486832 5.8078752 10.1318064 10.7435321 9.8296271 10.0642157 3.7672310 9.3590502 13.0135335 12.0502562 10.0194940 9.3886580 -0.4983000 0.5124600 0.6503800 0.0053387 0.0157270 0.0449990 0.0189430 -0.0044312 3.6569000 -0.0077671 -0.0077671 0.0185230 0.0035840 -0.5224600 0.0141900 1.0429000 3.6569000 0.0000000 0.0000000 0.0181300 0.0169850 -0.0291750 -0.0651790 -0.1780300 3.6569000 0.3395000 0.3395000 0.3395000 -0.0626160 -0.0479360 -0.4983000 0.0026357 0.0157270 0.0171240 -0.4650400 0.0189430 0.0189430 -0.5392600 -0.4780700 -0.5361200 0.0069435 0.0108270 0.0107030 -0.5113500 -0.4875400 -0.0205490 -0.0453700 -0.5224600 -0.5224600 0.0141900 -0.5746700 -0.4991300 -0.5172200 0.0000000 -0.0069770 -0.0069770 -0.4900800 -0.0102080 -0.0291750 -0.0305400 -0.5806800 -0.1118200 0.0879690 -0.1741100 0.3395000 -0.5332700 -0.0099565 -0.0820040 0.000 -0.522 0.000 -0.459 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 0.000 0.000 -0.522 0.000 -0.459 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 0.000 9.6477797 13.4409721 9.1673815 9.7372987 4.1615169 10.9738996 -1.3621579 -1.3621579 8.4143842 9.2590872 1.2229282 8.4033201 2.5448316 11.0056387 9.0053657 1.4453029 8.2059071 10.5601637 10.3815232 9.4299279 9.3109508 7.9888903 10.7020201 2.0973748 9.1136844 10.2332085 1.4453029 NA 11.3789966 1.6379348 12.3208359 12.4746917 8.7280634 9.5373079 9.2001934 10.0281199 5.2526616 1.4453029 -1.3621579 2.5448316 7.8763555 8.1318066 10.5452172 2.8078701 8.3787942 5.1457467 9.6802943 6.6877998 9.7451681 NA 10.6428737 4.5205920 6.5144679 9.6448520 6.9526026 6.4323665 9.3869823 8.8715708 7.7927688 -0.3619725 13.7089524 1.2229282 10.6592780 NA 7.9140753 4.7040420 8.3470349 7.8498392 13.8668737 7.6037354 8.6561513 12.1452501 10.0173293 10.6470798 12.8095187 11.1583242 12.2024578 10.6141570 13.2066197 9.9012202 9.2294733 10.5709038 0.9598443 9.6066179 11.0099998 11.366084 6.192539 8.742550 8.531252 8.819103 10.239397 7.461318 6.671374 11.259087 6.767234 3.807880 5.746477 8.627644 12.385515 10.396174 7.574589 8.559792 10.617376 7.355628 10.638810 9.260918 10.708072 9.159551 10.252661 10.075183 10.749739 8.892980 3.847406 9.379671 7.419311 11.565359 9.255418 11.082448 10.562763 6.932571 13.244588 10.649528 10.060016 13.139975 10.879338 9.335787 3.682349 TCGA-AO-A03L 34 0 NA 2442 breast stage iiia t3 n2 m0 female 2003 NA yes infiltrating ductal carcinoma 4 asian not hispanic or latino 2 3 1 1 1 5 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 9.92428461 10.25736533 11.66605442 9.07962291 8.83620787 9.88091827 9.92526632 9.85693653 9.98956736 14.18466695 10.56762996 10.92330215 2.40367675 13.49671202 3.21102777 9.31505783 7.24286922 8.55087066 9.39518772 12.81702939 -0.59640505 13.49170876 3.98863016 9.73434196 10.88974670 6.09715356 -0.01144255 10.86155974 11.02800445 -0.59640505 7.22703345 7.23655576 NA 4.33440380 10.27634079 10.73206039 10.50235596 10.84271757 9.48248389 10.98298181 2.92723278 10.08534352 14.87542049 8.31019559 10.99120670 11.72672067 10.64415912 5.17185132 6.39801853 9.30226741 12.01238277 -0.01144255 11.47764009 8.75791532 5.55341273 4.33440380 10.15018024 12.30424972 9.82099105 11.95897401 12.92041241 7.63248489 10.56227563 9.51307873 11.37017137 10.96136895 4.91146150 11.34214286 10.00450799 -0.01144255 10.16188907 9.21182577 3.44894059 4.77870797 9.58046247 9.81676496 10.70058207 9.64505331 2.57359266 5.13158537 12.76608922 11.77421712 9.44258485 9.53359294 -0.3436600 0.3458300 0.3291100 -0.4972500 0.3052100 0.0019841 0.2926200 0.2654500 -0.4859600 0.0127950 0.0127950 0.0127950 0.0238470 0.0238470 0.2744200 0.9711100 -0.4922500 1.7756000 0.2571500 -0.5120900 0.2709600 0.9429400 0.2263800 0.8402100 0.6213300 0.1629500 -0.5249100 0.1779900 0.2621600 -0.4214500 -0.3436600 -0.0536090 -0.4894000 -0.0257260 0.0379240 0.2926200 0.2790000 -0.1252500 0.2958700 -0.5014200 -0.3476700 -0.4029600 0.0127950 -0.4800800 -0.4800800 -0.1061800 -0.1061800 0.0238470 0.0238470 0.2744200 0.2185400 -0.4922500 -0.4922500 -0.5063400 0.2571500 0.2571500 -0.4750100 0.2709600 -0.1101700 -0.5024900 0.2557400 -0.5461300 -0.4187100 0.1629500 -0.5249100 0.2123800 -0.0630320 -0.5284900 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.110 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 0.000 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.110 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 0.000 8.64445731 13.44767574 6.82151890 9.74407244 1.90573598 12.00415960 2.49113478 -0.59640505 8.19808156 6.63248489 -0.59640505 8.04106991 0.98863016 10.87711800 9.85229853 3.35786162 8.76780044 9.80667786 9.17762932 11.33956761 9.88044248 8.82783204 10.24129380 3.57359266 8.57983898 9.69541223 3.35786162 0.98863016 11.38558990 2.31054371 12.68798395 11.96721970 7.69137853 9.24365694 9.95056042 9.09715277 5.21101998 2.21101219 0.98863016 8.84349681 8.95056027 9.56290656 11.18502562 4.21101998 7.88560670 8.33144368 9.64743486 6.12476443 10.12305467 -1.59640505 9.74184514 3.76122144 2.98863016 9.44616668 6.32562567 5.41489322 9.21984952 7.71881574 10.16355408 -0.01144255 14.19121142 NA 10.44361307 NA 8.15520986 4.21101998 7.95441270 8.70058225 13.573475 5.532950 8.269399 13.496712 10.033478 11.050225 12.817029 12.577811 8.452153 10.840117 12.956815 10.795983 9.302267 10.127327 3.211028 7.827832 11.705876 11.1876872 6.5483241 8.3766455 8.8548771 8.7819606 10.8885744 6.7028736 10.1447115 10.5676300 6.9114603 2.7255885 5.6704523 7.5738410 10.7924904 10.0988942 7.9330963 10.0888528 12.2226475 6.1718493 10.6937107 10.5023560 11.1535353 10.1535353 10.3395676 9.7295336 10.5345581 8.8995210 NA 9.0569319 7.2142375 11.4776401 6.4535143 10.1489200 10.1501802 7.3344029 13.5930272 10.2977257 10.0760913 11.6700133 11.0355250 8.8763567 0.9886302 TCGA-AO-A03M 29 0 NA 1866 breast stage i t1c n0 (i-) m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 4 1 2 5 2 4 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.824154e-05 5.999593e-06 9.5330947 9.7963894 12.5575429 9.1041112 8.8736385 9.2556239 10.7472106 10.6962961 9.7469862 15.1524493 10.3030923 11.1341017 0.9037324 13.7601637 3.1838517 9.6799362 7.0300734 8.5362142 8.5173962 13.0870191 NA 13.8929299 3.7110984 9.5231616 10.8491820 8.0963831 3.1407787 10.0542107 11.0802675 0.4183519 8.0822252 7.1048115 NA 5.8972840 9.9636620 10.2797084 9.5289250 11.2486681 9.7929162 12.2116708 4.9911998 10.7905235 14.8293456 7.4802821 10.5771709 11.0478501 11.1492909 3.9543638 NA 9.1041112 11.4837275 -0.9037381 10.9790263 5.9543638 7.1651613 4.4714216 10.8283386 12.0165500 9.8695224 11.6819326 12.6824020 7.3537714 11.1035858 9.9153368 10.9531978 11.2076819 4.8777442 11.9674221 10.1668397 1.0963968 10.9465700 8.9410890 3.3765960 5.4539356 9.1691857 9.9125669 10.0917971 9.5200244 0.4183519 6.5517098 12.7778413 11.9732838 10.4760324 9.3466817 0.0000000 0.0000000 0.0000000 -0.4504800 0.0286220 0.0033299 0.2071700 0.8408100 0.0192230 -0.0031859 -0.0031859 0.4463000 -0.2187400 -0.2187400 -0.2282200 -0.2198500 -0.2198500 -0.0494650 0.0161460 0.0066653 0.0066653 -0.4587100 -0.4630200 0.0144700 -0.0024938 -0.4363700 0.0804560 0.4321000 3.6569000 -0.0239430 0.0000000 -0.1955000 -0.4429700 0.0033299 0.0033299 -0.2068500 -0.2068500 1.5677000 0.0192230 0.4425700 0.0076392 0.7137100 -0.0957800 0.0030522 0.0030522 0.0030522 0.0012430 -0.2187400 -0.2187400 -0.2282200 -0.2198500 -0.2198500 -0.2198500 0.0161460 0.0161460 0.0161460 0.0066653 0.0066653 -0.4551600 -0.0048461 -0.4630200 -0.4309400 0.0024969 -0.4363700 0.0804560 1.1921000 -0.1599700 -0.0186280 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3454966 12.7951964 7.1407776 9.0234203 4.4045421 11.8050361 3.4539389 -0.9037381 7.9165620 9.3082714 NA 7.6255993 1.2663368 10.7574933 8.6091237 1.4182979 8.5351750 12.5244162 8.8810182 11.7569363 9.1092313 8.8595957 10.2149999 2.1416617 7.2101258 10.2211507 6.1785314 -0.3186857 9.3312007 2.6199529 12.6506723 12.2787000 8.1298064 9.6610092 10.1072609 9.9347992 4.5721196 2.4182979 0.4183519 3.4183114 8.3690132 8.7083300 8.6916406 4.0505801 7.5522649 6.7723396 9.8678727 6.3678463 9.7184351 0.0963968 10.3143409 4.3817886 3.0032784 8.9510256 5.8512043 7.4001639 8.7110932 8.9889261 9.3846726 2.9037324 13.6239519 0.6813143 11.4359549 NA 9.4768442 3.6813481 8.1117982 7.6605329 12.615712 7.132557 8.524743 13.760164 10.027239 10.277535 13.087019 11.203273 9.000265 10.635057 13.012962 10.650972 9.104111 9.465981 2.418298 7.235935 12.920845 11.4109665 5.9543638 8.9045431 9.7284697 8.1930985 10.7106306 7.3276047 9.8475089 10.3030923 6.7220916 0.9037324 6.7863807 8.9366103 11.0516699 10.8002868 8.8818356 9.6056634 10.8174824 7.9101642 10.2541186 9.5289250 10.7659327 10.1904609 11.7826649 10.1128433 10.8327851 9.6865025 NA 9.3147285 8.3525917 10.9790263 5.8174826 11.3167616 10.8283386 6.8445765 13.6884314 11.0738421 10.2045809 12.5557508 11.0302583 9.2880593 3.3817817 TCGA-AO-A03N 59 0 NA 2031 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 6 3 3 3 1 5 1 2 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.288862e-06 9.710324e-07 9.776953 8.660377 10.823940 6.956362 8.996519 10.388567 9.007790 10.573444 9.924750 13.284313 11.069936 10.711680 6.944680 11.870024 2.809517 8.950533 5.660378 8.469771 10.865578 13.527136 2.002162 14.315793 6.259553 10.629700 10.458520 8.447180 4.287568 6.932903 11.769523 NA 7.278290 7.068255 NA 3.909053 8.400909 10.731362 9.778599 10.042455 9.245340 10.803066 11.051334 9.685160 14.177481 5.726270 9.577705 11.017929 10.317881 2.702613 NA 7.780243 10.819549 1.587125 9.998639 5.428431 3.324091 3.002162 10.416851 11.870602 10.306517 11.723692 12.515030 8.292184 10.501513 9.663053 11.266315 10.117860 3.002162 11.676137 9.174593 2.324091 10.163298 8.663944 5.268951 3.250098 11.476886 9.548095 8.806297 9.706069 4.089625 9.569171 13.021061 12.487618 9.972991 10.377748 -0.4537100 0.9061300 0.9428200 0.0098669 0.0000000 -0.4017400 0.0062481 0.3372300 -0.1094000 0.0291840 0.0683780 0.0656560 -0.4801800 0.5581500 -0.0229740 -0.0229740 -0.0229740 0.4208300 0.4175700 -0.4488900 1.5076000 -0.0756120 -0.2860000 -0.2860000 -0.2860000 -0.1773600 -0.1773600 -0.1658600 0.6124400 -0.4639900 -0.4537100 0.0655130 0.0098669 -0.4017400 -0.3957500 0.0062481 -0.0084385 0.7383400 -0.1094000 -0.1059200 0.7227300 0.2623200 -0.4194800 -0.1555400 -0.1555400 -0.1555400 -0.1570700 -0.7204800 -0.9655200 -0.0229740 -0.0229740 -0.0094046 -0.0094046 0.4208300 0.4175700 0.4175700 -0.4488900 -0.4901600 -0.0450930 -0.4617400 -0.2860000 -0.2860000 -0.4521100 -0.1694200 -0.1773600 0.5971400 0.3934600 -0.4657900 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.561 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.223 0.058 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.561 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.223 0.058 7.681646034 12.177871150 4.809522488 9.634252011 0.002162421 11.231885784 2.324090516 NA 8.598355527 9.140437417 2.809517343 7.763716973 1.587124922 10.580066509 8.679885405 NA 5.743633446 9.257194292 6.089629499 12.156983784 8.226167468 7.068254837 12.164714356 2.587124922 8.407307284 9.395556199 NA NA 10.427381572 NA 13.306374368 11.818949355 7.481946317 9.260731630 7.929943637 9.896983362 5.956361055 2.702613220 1.324119326 11.177091344 8.199382305 10.051333489 11.377476645 3.809517343 7.583366388 7.688666445 10.352552419 6.723265023 9.530619750 NA 10.865190341 0.587172939 4.359717939 10.549696506 7.082930334 NA 7.411556747 6.250093725 6.278289615 1.324119326 14.692763910 1.002162421 10.015488370 NA 8.233386718 6.436793147 8.583366388 8.953450337 12.237939 5.730086 8.926978 11.870024 9.776953 11.364109 13.527136 9.730937 8.609496 10.385330 13.163613 7.110690 7.780243 8.498021 NA 7.245340 11.150007 10.548095 6.477899 8.887862 8.870988 8.154451 10.649003 4.461594 6.688666 11.069936 7.750359 2.461607 4.884808 6.187833 9.874841 10.111343 7.121107 9.313914 6.587128 3.089634 12.508546 9.778599 11.888053 10.515400 9.756218 9.427382 9.700870 6.890909 NA 8.751918 1.002162 9.998639 8.543262 9.304805 10.416851 7.896983 13.574925 10.258374 11.087638 12.387219 10.706502 8.665724 NA TCGA-AO-A03O 69 1 2483 NA breast stage iia t2 n0 (i-) m0 female 2002 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 7 3 1 NA 1 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 1.629947e-06 2.427581e-07 9.9190455 10.0055510 11.8735986 9.0322684 8.1511663 9.0490162 10.1747949 9.3563606 9.1958960 13.3939524 11.0534695 10.8623058 3.6120104 12.5362896 3.6626385 7.8814682 4.0525811 8.1107140 10.8950957 12.9849501 1.9745660 13.7244934 4.2309177 9.2818338 12.0759695 6.1796922 NA 9.1533805 10.6552300 0.3895668 9.6587415 5.7115417 -1.1952856 3.9339314 10.2884682 9.8284067 9.6665148 10.0000247 10.3500996 11.3389553 6.9390784 10.9377946 14.8025375 8.0059675 9.8947649 11.4184419 10.7416583 3.1265765 0.8046318 9.9638931 11.8225047 -0.1952856 10.4294479 5.1445033 6.1175351 5.2803848 10.0929417 12.2160310 10.4138311 11.1129915 12.7797839 8.1015687 10.9566202 10.0836825 11.2161634 11.4668757 4.7588468 12.1730224 11.9800460 NA 10.3539557 10.0460397 2.9022666 4.8921141 10.9486733 9.7175417 9.6634104 11.0590906 9.2824106 8.6103963 12.3628339 10.4902772 10.4376476 9.5085560 -0.0062421 0.8026200 0.9003000 -0.0147780 0.4248600 3.0389000 0.4449900 -0.0103570 3.6569000 0.9162200 0.8647700 2.7800000 0.5936800 0.3631300 -0.0530710 3.6569000 -0.4844900 0.9017000 3.6569000 -0.5159900 0.2962800 -0.0024938 -0.1352300 0.0351000 0.0279910 -0.0712940 1.2850000 0.3264200 1.7051000 0.0018030 -0.0062421 0.0046683 -0.0147780 0.0080567 0.3906500 -0.0187650 -0.0187650 0.0000000 0.2483500 0.4268800 -0.0520220 -0.0149160 -0.9944400 -0.4881700 -0.0164290 -0.5033800 -0.5163000 0.3357700 0.2491800 -0.0530710 -0.0340900 -0.9745200 -0.9825200 -0.4891100 -0.1329000 -0.1061800 -0.4891100 0.3301100 -0.0024938 -0.4744800 -0.1352300 0.0351000 -0.0106460 -0.0733430 0.3664100 -0.0469890 -0.0465830 -0.0027707 0.594 0.405 0.000 0.000 -0.428 0.000 -0.516 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 1.164 1.164 0.349 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.380 0.380 0.000 0.000 -0.517 1.620 -0.483 -0.483 0.134 0.134 0.594 0.405 0.000 0.000 -0.428 0.000 -0.516 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 1.164 1.164 0.349 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.380 0.380 0.000 0.000 -0.517 1.620 -0.483 -0.483 0.134 0.134 8.1015687 11.1996509 4.8270213 9.1544865 2.6078866 10.5553594 1.6120222 -1.1952856 8.0478263 8.4998806 NA 7.6023136 1.3896219 10.7592123 9.2671547 2.2640860 6.9645234 9.4981393 10.6899675 9.8761148 9.3212487 7.5120119 9.9203463 1.8046318 9.0573179 9.2065985 4.1622020 NA 10.9752034 NA 12.4909341 12.3119515 7.0334715 10.4726509 12.5818050 9.9777048 5.4628638 2.2640860 NA 7.9969451 9.0466357 9.2161633 9.2722579 3.1969689 9.3368330 5.8158802 10.1422743 6.4557037 9.3242886 NA 11.0015618 2.5051033 2.7115390 9.9009921 5.2394477 5.6248320 8.4193623 8.7486323 8.8828032 2.1265765 13.8987301 1.3896219 9.9638931 0.3895668 5.7471672 3.3896081 8.0784481 6.4841333 12.898971 7.525752 9.177517 12.536290 9.838764 10.821461 12.984950 12.309347 8.556196 11.635710 13.003865 11.159177 9.963893 9.165499 NA 7.320352 11.447155 10.998486 5.954399 8.930066 9.273276 9.405494 10.124104 6.484133 4.162202 11.053469 5.328215 1.126576 4.892114 7.939053 10.627223 10.189436 9.241364 7.972071 12.868974 6.886801 11.707039 9.666515 10.934257 9.942284 11.458617 8.541054 10.143946 8.222505 7.900049 8.834602 6.933935 10.429448 5.404566 9.611202 10.092942 7.300507 13.455984 10.530445 9.152274 12.524469 10.940041 8.863997 2.505103 TCGA-AO-A03P 54 1 2911 2576 breast stage iib t2 n1 m0 female 2003 2576 yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 1 1 NA 3 5 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 3.81477e-07 10.010955606 9.573647566 11.715483729 8.522163275 9.337917323 8.846971189 10.855576548 10.240931660 9.325206273 13.623892027 12.411122033 11.180569283 0.002594517 12.931908645 4.002522510 6.913419624 4.118002497 8.714480795 8.766292691 13.541604943 2.665483733 14.754315043 NA 9.654062954 11.199948406 6.089989587 0.739502506 8.345342259 9.753512948 0.739502506 7.541685967 7.211980741 NA 4.925358606 10.001587359 9.867229001 9.845924676 10.909918353 9.843304909 11.248871660 5.046923175 11.705276810 14.420555200 7.973572246 9.522163275 11.153966351 11.077114391 4.775119039 -0.582512001 8.664305053 9.834889576 1.002522510 10.692815983 3.972150393 4.224920075 3.417569010 10.263838301 12.591709894 11.091315179 11.251837951 12.631883539 7.592489927 12.144314765 12.193233342 11.109744025 10.925359051 4.646381580 11.794774952 12.451675585 0.002594517 10.143782547 9.234548023 3.401698723 4.300204279 11.556955893 10.424591685 10.848278342 10.114966375 5.917410272 5.211981714 11.625798780 10.698045234 10.334936482 9.280201698 -0.3650200 0.4672400 0.4636500 0.0745060 -0.2374100 -0.0097548 -0.0631660 0.0297470 0.0143300 -0.7712400 0.0718220 0.4818000 0.0036076 3.6569000 -0.1072300 0.3904800 -0.7397600 0.1713600 0.1713600 -0.0861200 0.4314200 3.6569000 -0.1808100 0.4067700 0.4067700 0.2722200 -0.2375300 1.9020000 3.6569000 -0.3178600 -0.3650200 -0.3123700 0.0745060 0.0000000 -0.0097548 0.0130740 0.0109820 0.0297470 0.0143300 0.0143300 0.0171240 0.0297470 -1.2617000 -0.0069195 0.0059700 0.0059700 0.0298090 -0.7561600 1.0559000 -0.1072300 -0.0323140 -0.7577100 -0.7577100 0.1713600 0.1713600 0.1713600 -0.0654470 -0.3587400 -0.5242000 -0.3498500 -0.2002500 0.4067700 1.4805000 -0.6841500 -0.6263800 0.8295800 -0.3917000 -0.7663600 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.560 -0.560 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.560 -0.560 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 0.000 8.2070983 12.7574840 7.4231890 9.0514678 4.8431598 10.9367092 0.7395025 -1.5825120 8.8636139 8.0118892 NA 6.7969429 2.1179942 10.5155965 9.8227059 3.8098774 4.5673142 10.3446016 6.4231882 10.7778628 9.5286872 9.1707811 11.4016268 0.4175960 9.2313455 8.9855206 2.1179942 NA 11.2494654 3.8438331 13.3998005 11.9242439 7.7860709 10.6442777 8.9064087 9.0659220 2.8098877 2.9411251 NA 2.5874850 9.4856709 9.7877069 9.6595475 2.3244650 6.0318319 8.1989243 11.3564089 5.9489465 9.6896109 NA 12.6839850 2.3244650 5.0757765 10.5072069 7.3233728 4.4175623 8.3274574 7.2910086 6.4509869 2.6654837 14.5796803 -1.5825120 10.5445914 -1.5825120 9.0802329 5.2249201 8.6367330 8.5899919 14.931647 5.461957 9.129231 12.931909 10.544527 11.197079 13.541605 18.078561 8.228136 10.806120 12.495131 11.786480 8.664305 9.104940 2.002523 8.455111 12.485335 10.790429 6.775116 9.031354 10.030433 9.499714 11.059427 5.324454 10.013754 12.411122 6.306308 -0.582512 6.814170 7.640045 9.593738 10.067270 9.931637 9.743994 10.348671 5.198922 11.160369 9.845925 10.837788 9.893298 12.438544 9.754629 10.695433 8.669047 -1.582512 8.389280 5.287930 10.692816 5.809883 10.315032 10.263838 7.209053 14.524373 10.702678 9.874945 12.233948 9.857395 9.291009 1.002523 TCGA-AO-A03R 57 0 NA 2091 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 3 2 5 NA NA NA 3 4 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.976338e-07 4.161568e-07 10.1804156 9.2405705 11.4489044 6.8350562 8.5593102 8.5745500 9.8888784 9.5896307 11.2373821 13.1442727 10.7769527 10.4101415 0.4171639 10.7598334 2.7391352 9.5795945 6.8684139 8.1586703 8.0574481 12.2199215 0.4171639 14.3250796 5.3479420 10.1862145 11.1241308 9.0392549 2.5871249 8.7413837 10.7306531 4.4172044 6.7570526 6.9407646 -0.5827281 4.1720874 8.0355887 9.3464617 9.1019518 9.2293805 8.0282282 10.1586701 3.4172044 9.6290914 14.7299089 5.8735155 9.8570341 10.8180826 9.6544132 4.3713986 1.0021624 7.9130581 11.6384882 NA 11.3074675 5.4395699 5.0610590 2.8766250 9.4492489 12.0803165 10.1878671 11.3086072 12.6076452 6.9640971 10.6921636 10.1870410 10.9936875 10.9832572 3.0021624 11.1446983 12.3620982 NA 10.6478241 10.2309844 3.7398481 5.2500937 10.5701217 9.0520142 10.1072011 11.4097875 2.7391352 9.2500933 12.3939463 12.2130399 9.6686856 9.4058879 0.01126100 0.59458000 0.57416000 0.02216400 0.00263570 -0.00138580 -0.00581400 0.00944910 -0.62941000 2.73940000 2.23100000 2.20060000 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.00138580 -0.64246000 -0.00105080 -0.61987000 0.01279500 0.02496900 -0.60960000 0.03115500 0.53960000 0.02482900 0.02482900 0.02104300 0.01670500 0.01126100 0.01126100 0.00000000 0.00485790 -0.00138580 -0.00138580 -0.00429290 -0.00429290 0.00944910 -0.62941000 -0.62941000 0.00221930 -0.00010962 -0.62655000 0.00903120 0.00903120 0.00903120 0.00903120 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.00138580 -0.00138580 -0.62093000 -0.00105080 -0.00105080 -0.61987000 0.01279500 0.00059652 -0.60989000 -0.60960000 0.03115500 0.00944910 0.02482900 0.02482900 -0.62417000 -0.60555000 0.03947800 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 -0.228 8.6045551 10.6315223 4.2751859 10.0171160 6.0754150 10.4207211 3.8766348 1.4172179 9.2983172 7.1245618 NA 7.7255421 4.2245574 10.6296996 9.2829364 4.6651312 8.5152354 8.7987462 8.6168756 12.3297183 9.5354045 7.1037032 11.2967864 2.0021624 8.1072014 10.5198351 4.2751859 NA 10.6857452 2.7391352 14.1558232 12.1706289 6.9090566 8.9582998 8.1620368 10.0745216 2.4171909 1.7391136 1.0021624 6.1853869 8.7118239 10.5092996 9.8191492 5.6651312 7.5764692 8.1620368 10.4340114 6.3120207 9.9368395 0.4171639 9.5846213 1.4172179 3.8095173 9.6583402 6.0580264 5.2500937 9.5783351 7.3772053 8.4805984 NA 14.6268850 -0.5827281 10.4526896 NA 9.1886927 5.5046649 7.8518315 8.9870588 13.355978 4.971792 8.754825 10.759833 9.665131 11.356415 12.219921 11.857813 8.655608 9.302900 13.245042 12.352000 7.913058 9.156984 1.002162 7.262693 10.931917 10.9490719 5.5257275 8.2998463 8.9407652 8.3538411 10.0408378 6.5669506 5.7570526 10.7769527 7.8888784 2.0021624 5.7391325 7.7051001 9.9269782 10.4602304 10.4492488 10.4595466 7.9870588 6.1853869 11.9670456 9.1019518 10.7758544 10.4023336 10.0556391 9.3523681 10.5618614 8.0096601 -0.5827281 8.6944906 7.7072218 11.3074675 4.0021624 11.3240938 9.4492489 7.2051061 14.6026981 10.7954981 10.9095571 11.8526130 10.6162620 9.6745909 2.5871249 TCGA-AO-A03T 42 0 NA 1456 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 1 NA NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 6.242351e-07 9.5151353 9.2859681 10.8388871 6.5482100 9.4154547 8.8605941 9.1619489 10.4838769 10.4257384 14.1468964 10.0786484 10.5708216 2.4998586 12.2936719 3.1278809 8.6178443 7.6661239 8.1515509 8.9711527 12.4098763 1.0404015 13.2513910 5.3072026 10.3200259 10.5901999 9.0148298 NA 11.0025775 9.6102710 4.1278809 8.5969214 7.3668450 NA 3.5639757 8.0119590 9.5049610 8.2277675 11.2767285 7.9473061 10.0669387 6.4666793 10.1964984 14.5293538 7.3214646 11.5732582 9.6752263 10.1218987 5.7953020 7.5120902 7.8348313 11.1088577 NA 10.2871559 8.1437031 5.1065033 4.8733063 9.8348311 11.7453996 10.3211860 11.5008712 12.0715996 9.2847792 10.7334666 10.2296222 10.9766851 10.1748416 2.3623296 11.1873021 11.6180801 -0.9595985 10.4587950 8.6914668 4.2498700 3.9473015 10.0820745 9.9184661 10.7797740 9.9996928 3.2103421 7.7852491 11.1825224 11.7214340 9.6281929 9.7827247 0.0070826 0.0070826 -0.1226500 -0.5546700 0.0086180 0.0073609 0.0000000 -0.1162600 -0.5544100 -0.0162920 -0.0162920 2.4370000 -0.4624900 -0.5629600 -0.0142280 -0.0142280 -0.5624600 -0.4543600 -0.0048782 0.0037465 0.0153080 1.0298000 -0.0263040 -0.0263040 0.5640100 -0.0336770 -0.0336770 -0.0336770 1.0224000 -0.0113350 0.0070826 -0.5808800 -0.5546700 0.0073609 0.0073609 0.0000000 0.0066653 -0.1162600 -0.5544100 -0.5729600 0.5249800 0.0273570 -0.0162920 -0.0254830 -0.0254830 -0.0254830 -0.0320410 -0.5629600 -0.5629600 -0.5729900 -0.0142280 -0.5624600 -0.5624600 -0.4543600 -0.0048782 -0.0048782 -0.5468300 -0.5634600 -0.0040162 -0.0238240 -0.5795000 -0.0263040 0.0141900 -0.0336770 -0.0336770 -0.0208240 -0.0069195 -0.0187650 0.000 0.000 0.000 -0.548 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 0.000 7.84131525 11.13284208 5.91078062 10.14566905 4.65512281 11.63473991 3.28834380 1.36232961 8.86218914 8.89060203 NA 7.04604026 2.74086282 11.13449300 9.00764151 2.94731082 7.35782820 8.93977225 9.80528681 11.41219192 9.64182399 7.09569766 10.83807683 1.36232961 8.29071375 9.90692155 4.68426893 NA 11.58054331 3.21034210 12.71868531 12.25791868 7.67704023 8.93219910 8.27882019 10.31012639 5.10650327 2.04040152 0.62536402 4.87330630 8.64774550 11.23547984 9.73825172 5.59500529 7.73665290 8.61216780 9.83726603 5.64032882 10.37747963 1.62536402 10.70575117 -0.95959848 5.08480839 9.82331517 7.45641027 3.74085202 8.87488639 6.72691566 11.40974000 NA 14.35602483 2.36232961 11.39906650 0.04040152 7.92611153 6.66977231 8.31187816 7.49162625 13.136459 6.159357 8.950308 12.293672 10.469299 10.246209 12.409876 13.063910 7.979994 9.269234 12.432330 10.683370 7.834831 8.020555 1.362330 7.117231 10.333312 10.7425880 6.3258181 8.7563772 8.6824669 8.0375947 8.7591708 6.0848084 6.3350366 10.0786484 7.6914672 NA 8.5988360 8.2625821 10.0184107 10.5959631 8.8921642 10.1443587 8.2103402 6.2203242 12.5231224 8.2277675 10.5541429 10.5171615 10.4273556 7.8380769 10.3595228 6.8477702 -0.9595985 8.9496934 6.0290995 10.2871559 4.7683379 11.0101615 9.8348311 7.6403281 14.1457100 10.8307638 9.8772547 11.9274455 10.3930105 9.3025101 1.0404015 TCGA-AO-A03U 31 1 1793 NA breast stage i t1c n0 (i-) m0 female 2001 NA no other specify 0 white not hispanic or latino 4 4 2 4 1 3 2 5 4 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 3.467973e-08 10.4903603 9.8986491 11.2899120 10.1193274 8.1824420 9.3251712 9.5110228 10.2305053 11.7754644 13.3802576 10.1287955 10.3624348 1.2876496 11.9847005 4.1702696 12.7202315 5.1824420 9.6544928 5.3750881 6.2418211 -0.7124095 10.6216182 4.5730291 9.4656107 9.3141477 4.0155422 NA 13.0864100 8.0475128 3.0949792 9.1556751 10.0404230 -0.7124095 4.1205178 9.6274742 9.8484348 9.8645810 10.5919757 9.9915279 11.4119072 2.9880666 5.1078050 15.3233255 7.5752216 8.9050918 11.4311670 11.3170841 3.1456122 NA 9.6106790 13.1758919 0.2875905 11.6012160 6.1141733 8.7904560 5.1824420 11.0524959 11.3925506 10.0541532 12.0627202 12.5402158 7.7138889 10.9371050 10.7770735 10.7969045 11.1909414 4.6970176 11.0117118 7.3590863 -1.7121731 10.3836805 8.8772755 2.5544169 5.9169805 10.3849981 10.4055921 9.8796140 9.7154610 1.4575418 8.1687383 12.7893993 13.5869039 9.7017810 9.5649118 0.01265500 0.01265500 0.01265500 -0.00249380 -0.00249380 -0.01098300 0.00069327 -0.00401620 -0.00401620 -0.00290910 -0.00290910 -0.00408080 -0.10972000 -0.10972000 0.00069327 0.00069327 0.00069327 0.00027728 0.00027728 0.27316000 0.00000000 0.01056400 0.00763920 0.00763920 0.00763920 0.01098200 0.01098200 0.00877720 0.01223700 0.01265500 0.01265500 -0.00253290 -0.00249380 0.00152550 -0.01098300 0.00069327 0.00069327 -0.00401620 -0.00401620 -0.00401620 0.00332990 0.00180300 -0.00290910 -0.03163200 -0.03163200 -0.03163200 -0.03163200 -0.10972000 -0.10972000 0.00069327 0.00069327 -0.00173220 -0.00173220 0.00027728 0.00638710 0.00638710 0.27316000 0.00000000 0.01056400 0.01405100 0.00763920 0.00763920 -0.00263220 0.01098200 0.00877720 0.01223700 -0.00290910 -0.01546600 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3537134 13.3698565 3.5730230 10.4961635 2.7646434 10.3580807 0.6095659 2.5355553 8.5485437 7.9368805 0.2875905 7.7070160 1.7470436 10.0441807 9.0820402 1.0949792 6.3961492 10.5736044 12.7832296 9.9165255 9.8098625 7.4749762 13.0475645 5.7552294 8.8199801 10.0353978 5.2064869 NA 11.0202158 3.4169073 13.0776164 12.9905545 8.7128403 10.6171404 9.0010109 8.8847457 5.3099910 1.0949792 -0.1273682 NA 8.4995127 10.0994004 7.6863682 12.2369039 9.9497987 6.7096890 10.0763426 5.4169073 9.4958586 11.6702483 11.5285647 3.6799417 4.7470543 9.3860052 6.6200189 4.1205178 10.5025505 9.9811113 5.9169805 -0.7124095 13.9525993 NA 10.7112655 -1.7121731 7.8555805 4.9169829 7.6948920 8.8744641 11.7089002 5.0949792 8.7232947 11.9847005 10.7714401 10.2187312 6.2418211 11.2174375 8.9839313 10.7577341 12.7795400 10.6460008 9.6106790 7.7012524 -0.1273682 7.4600520 10.6103975 10.9536264 7.2242622 8.5152402 8.3333839 7.6863682 9.7026636 9.1338982 5.9458347 10.1287955 6.9206196 0.2875905 9.7480803 7.0019047 12.0774636 10.9682036 8.5284158 8.4181950 12.3237979 5.7874690 10.2073518 9.8645810 10.3134559 9.5736044 11.6777933 10.9185739 10.3800511 9.4091578 NA 9.6383150 4.4970758 11.6012160 7.3044326 11.5686850 11.0524959 6.9314810 14.2280962 9.9997214 10.3367922 13.0358172 9.4316451 9.2257336 -0.1273682 TCGA-AO-A03V 41 0 NA 886 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 2.427581e-07 10.3490752 9.9145316 11.9216951 9.5397670 7.3842122 9.8968369 10.7051242 10.2093578 9.3086066 14.6060377 11.7634077 10.9857303 1.4568587 12.3959121 2.8194229 9.5428044 6.8638220 7.8118942 14.1320586 13.1210510 0.9714424 12.8709388 6.0332071 8.8796313 11.1968793 7.2494159 -1.3503386 8.5443204 9.8393273 2.6495005 7.3706020 7.4664860 -0.3505225 3.5074775 10.2865804 10.5148494 8.1413556 11.3757209 10.2752116 11.2890695 5.5198690 9.7176093 14.3333472 8.3015410 10.1302929 11.0150050 10.2335257 3.9349033 5.2193583 8.9406733 11.4983213 -1.3503386 10.5835621 4.4823901 4.3499455 3.9349033 9.9854513 11.9542819 10.4043902 12.0482464 12.8191929 7.3324976 11.8757644 9.8783215 11.3710292 11.5631402 5.3360048 12.1214319 12.5834700 4.0757636 10.3786986 9.3740166 4.2077679 3.8589557 10.7223053 11.1081657 9.9068906 9.5912839 2.4568587 9.4776393 12.2574109 12.6269616 10.0950350 10.0663003 0.06365200 -0.00097017 -0.00263220 0.04528200 0.01507500 0.65875000 -0.78218000 0.00027728 0.00972760 -0.61959000 -0.61959000 0.34655000 0.82637000 2.91430000 -0.00940460 0.00235810 0.00235810 0.01349200 0.00133840 -0.75072000 -0.00193990 2.12070000 -0.72146000 -0.70181000 -0.72170000 0.03326700 0.03326700 3.64590000 3.65690000 -0.00176230 0.06365200 -0.71737000 0.04528200 -0.00207840 -0.70190000 0.00319100 0.00319100 0.00027728 0.00027728 0.00444110 0.00152550 -0.02393200 -0.07654500 -0.72341000 -0.72341000 -0.03095000 -0.66217000 -0.53906000 -0.51063000 0.65866000 0.00235810 -0.73954000 -0.75262000 -0.00290910 0.00166420 0.00166420 -0.00981850 -0.00193990 -0.65901000 -0.75582000 -0.75020000 -0.70181000 0.00041593 0.03326700 -0.68175000 1.29160000 -0.01050800 -0.00415460 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 0.643 0.643 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.723 -0.203 0.000 0.000 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 0.643 0.643 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.723 -0.203 0.000 0.000 8.4871306 13.2627167 5.0418212 9.6530206 2.1680322 11.5531963 1.2344400 NA 8.4696817 8.0588939 0.6494775 7.4242898 4.1413592 10.5214080 9.7658467 1.9714424 7.6095046 10.4139597 8.8467196 8.4176871 9.7477059 9.7632449 11.1684017 1.2344400 9.2184090 9.5167815 4.0418212 -1.3503386 9.6794801 4.0070519 12.2992080 12.8188014 7.9714309 10.5156226 8.7155921 8.4487845 6.1007149 -0.3505225 -1.3503386 4.3499455 7.9302737 10.1216858 10.0450369 5.1252378 8.2059320 8.1886615 9.8747101 7.1730645 8.7800732 -1.3503386 9.7409382 3.2344707 4.2344630 10.1264666 5.8206283 4.0418212 8.7007116 6.9937989 6.7369660 0.9714424 14.0292196 1.2344400 10.7445701 NA 7.6663114 5.3774223 7.8169209 8.6282133 13.166048 5.809373 8.946419 12.395912 11.523908 10.492246 13.121051 14.364312 9.386260 10.827234 12.807244 11.030775 8.940673 9.134326 1.971442 6.513688 12.916875 10.617089 8.024542 9.769741 9.458467 7.287360 9.713322 5.404389 8.813152 11.763408 5.075768 2.736973 5.704786 5.756039 9.946992 9.628928 7.571344 9.342990 10.478036 5.934906 11.447316 8.141356 10.481997 9.430042 11.248951 9.671871 9.775562 8.789054 1.819423 8.745954 5.819428 10.583562 5.704786 10.275668 9.985451 7.629642 14.008908 11.061278 9.718281 12.094000 11.123716 8.633921 1.649523 TCGA-AO-A0J2 41 0 NA 997 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 1 NA 1 3 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 6.935946e-07 8.6065869 9.1392904 10.9743913 8.3333929 8.9847742 9.8029842 9.4109255 10.2551601 11.0467155 13.6203953 9.3580331 10.3438689 0.7736588 13.1101106 2.8325863 10.2791778 6.7960643 8.0467153 7.6044761 12.4425081 NA 11.6571040 7.7811918 9.3597298 10.5410538 9.9622858 5.0342245 11.6308992 11.8048238 NA 8.7623817 7.4054802 NA 5.5016175 9.8167243 10.2006605 8.7821258 10.5416055 9.0690832 9.4301219 9.7713470 9.2262814 14.6078553 7.1789805 8.8891742 9.8112440 9.0389215 2.3586494 0.7736588 8.0263624 9.7881824 -0.8112193 7.9402784 4.1194724 5.9029804 4.9569209 7.4671841 11.9841654 9.6097474 11.0212290 12.1864432 8.4993472 10.1411118 9.3202829 11.0969394 10.9128220 3.5462895 11.2112757 9.3238024 0.1887807 10.3292447 9.2900536 2.1896348 4.2548208 11.6507254 9.8379907 10.5553300 9.3479752 -0.2263412 9.6254460 12.5844025 12.7679915 10.0827944 9.5664874 0.417310 0.426880 0.688120 -0.062764 -0.167900 0.400110 -0.050911 -0.508260 -0.534390 0.864530 0.864530 0.011679 0.463310 -0.509700 0.341450 0.031859 -0.500900 0.450540 0.390890 -0.090229 0.432600 -0.503080 -0.494650 -0.012438 0.891860 0.022024 0.332210 0.267810 2.059400 -0.092345 0.415130 -0.075878 -0.035585 0.462630 -0.528280 0.413290 0.388000 0.460750 -1.051100 -1.073100 -0.043195 -0.479340 -0.599060 1.756300 0.369040 -0.037762 -0.478180 -1.218200 -0.085457 -0.557770 0.031859 0.509330 -1.079900 -0.511660 -0.524430 -0.524430 -0.052801 -0.534190 0.390810 1.055100 -0.552660 -0.473950 -0.533170 -0.470350 -0.488690 -0.514240 0.422670 1.640200 0.436 0.436 0.000 0.000 0.391 0.391 0.000 0.000 0.391 0.000 0.000 -0.495 -0.495 0.421 -0.533 0.268 0.268 0.754 0.754 0.000 0.000 0.000 0.000 0.389 0.000 0.000 0.000 -0.526 -0.526 0.382 0.382 0.000 0.000 0.000 0.401 -0.535 -0.187 0.000 0.000 -0.268 0.301 0.436 0.436 0.000 0.000 0.391 0.391 0.000 0.000 0.391 0.000 0.000 -0.495 -0.495 0.421 -0.533 0.268 0.268 0.754 0.754 0.000 0.000 0.000 0.000 0.389 0.000 0.000 0.000 -0.526 -0.526 0.382 0.382 0.000 0.000 0.000 0.401 -0.535 -0.187 0.000 0.000 -0.268 0.301 7.6685149 12.8929083 -0.2263412 9.5134775 3.7433211 11.9076954 0.7736588 2.2761989 9.9238673 7.5174096 1.3586776 6.2922848 8.4054802 11.0428237 9.3302030 4.2548208 6.4695051 8.2534774 11.0941215 11.0943095 10.2419069 6.8752345 10.3736098 -0.7069827 7.4366624 10.2930057 2.7737010 -1.8114725 11.0616017 0.9960995 12.4898734 12.9119688 6.9700944 9.5783659 9.9306228 9.6522588 6.3933064 1.7737010 NA 9.3011740 9.1008754 10.3760865 8.0326557 2.7737010 9.4441113 8.2695522 9.7433234 6.0467159 10.4522972 0.1887807 11.8172940 2.3586494 4.1194724 10.7425198 7.8753052 3.7433211 8.9668117 7.5151637 8.3244439 5.2548245 14.2785160 0.1887807 10.5103807 NA 9.6181412 4.0216219 8.0184573 8.9855852 12.1145133 8.0529207 9.1436577 13.1101106 9.9498702 11.9473741 12.4425081 6.8926375 8.2628761 10.1109472 12.9007778 11.0103092 8.0263624 7.8943667 0.1887807 7.5528689 11.9706064 11.6079046 4.7122986 9.8690941 7.8995412 4.3384815 9.7070730 6.6925597 6.8397858 9.3580331 10.3070267 0.9960995 9.2255950 9.9570430 11.8527373 10.8391131 7.9901840 9.4467116 8.3548977 5.3884065 9.1818639 8.7821258 9.8280752 10.4865106 8.9502858 8.9098337 11.0496275 8.4103216 -1.8114725 10.2207147 5.2221593 7.9402784 7.1283140 9.7720430 7.4671841 7.9960893 14.1752654 10.9855853 11.0793788 11.9743913 10.7017218 9.5010502 0.1887807 TCGA-AO-A0J3 67 0 NA 651 breast stage iib t2 n1b m0 female 2009 NA yes other specify 1 white not hispanic or latino 3 1 1 NA 3 5 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 5.895554e-07 10.536789315 10.063568464 11.500628446 8.439217115 8.130652412 8.663526084 9.566167280 9.628631447 7.308513781 13.409315816 12.363761865 10.837178815 0.576086724 11.699645887 2.849078522 6.229505250 6.755971788 9.578409490 7.879844198 14.212234770 -0.008827391 15.253975624 -2.008682243 9.869431444 10.337614544 6.434044360 0.313013609 10.307806568 10.779819142 NA 6.870684050 4.434041023 NA 3.239031363 9.428852992 9.383418317 10.002328129 9.216308376 8.945297218 11.257594567 4.078567141 9.773689634 13.729984749 8.593975926 9.709205497 10.983862209 10.450532473 3.772455785 8.785516550 8.727502897 9.680225182 -2.008682243 10.650427824 9.142751658 3.348657345 3.576062531 9.837374690 12.045959468 9.921838111 10.718383119 12.770255884 9.834236692 11.021940351 10.459470350 11.197352108 10.604199600 3.921836178 11.246424536 12.843045023 -1.008972553 10.838745471 8.921838260 3.038120075 2.849078522 10.493186772 9.708348833 9.647525703 9.985100622 0.991100030 4.909965067 10.126168718 9.166650428 10.057526494 9.848304323 -0.5599700 0.8976800 0.0181680 -0.5648500 -0.0053992 0.5248400 0.2549600 0.0484040 -0.5732800 3.6569000 1.1180000 0.5900900 1.1396000 0.0582240 0.3088900 2.6012000 -0.5355100 0.0448570 0.5788600 0.0310140 0.5865000 0.0665150 -0.5117700 -0.4952700 2.5284000 -0.4736300 -0.4736300 -0.4736300 -0.0369460 -0.4796500 -0.5560700 -0.5269600 -0.5648500 -0.5633600 1.0285000 -0.0037395 -0.0215230 0.0484040 -0.5732800 -0.5699200 0.4051100 0.6417600 -1.2083000 -0.5589700 -0.5589700 -0.5435100 0.0957780 0.0582240 0.0582240 0.3088900 -0.4909900 -0.5510600 -0.5510600 0.0448570 0.0525250 0.0525250 -0.5763400 0.0610790 0.0665150 -0.5278800 -0.5117700 -0.4952700 0.0385890 -0.4736300 -0.4736300 -0.0369460 -0.1924900 -0.4453400 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 -0.113 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 -0.113 6.8828851 9.7001846 7.9640809 6.9394676 2.2121958 11.3345642 0.3130136 NA 9.1370329 5.8365907 NA 5.1173917 -2.0086822 11.1147373 8.9511028 2.7984653 5.2578856 9.6537693 5.4829547 9.1332080 8.5483923 6.4381847 10.0848485 -1.0089726 8.6573249 9.7143352 1.3130136 NA 12.0179700 2.9452893 12.4405074 11.6899140 5.8919684 9.4617598 8.8994935 9.1300124 1.7984653 3.5146651 -2.0086822 5.5835582 8.1956719 9.6837163 10.2888769 1.1610492 7.0536327 7.6776013 10.1178053 4.0996234 9.5882223 -2.0086822 7.3287225 0.7984238 5.6984602 10.0401257 6.3789035 0.3130136 7.0436693 6.7291925 2.8490785 NA 13.5253125 0.5760867 10.9503783 NA 9.0348116 5.3919808 9.0497691 9.0679164 17.096048 6.210270 9.469365 11.699646 9.905112 11.150341 14.212235 13.431451 8.483515 10.443085 12.724487 10.184626 8.727503 8.174736 -2.008682 8.754313 11.258180 10.9831540 8.2306992 8.2971625 10.7081345 8.1522326 10.8751969 4.4505316 4.5146651 12.3637619 6.6915411 NA 2.6915342 6.6545873 7.5166219 10.3242562 8.6975970 10.6978126 10.6712406 2.1610170 11.4893405 10.0023281 10.4497638 10.0798890 11.2238215 7.6564370 10.7623839 8.5656943 -0.4239133 8.9999425 2.5760625 10.6504278 3.8979955 11.8633909 9.8373747 7.0272746 13.1447716 10.3967742 9.6181786 10.9445698 9.8533507 9.8897021 -0.4239133 TCGA-AO-A0J4 41 0 NA 1587 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942065e-06 6.242351e-07 10.2253513 9.5556116 11.7350623 10.4212569 8.3790738 8.9874121 9.8066224 10.4444043 12.7726531 13.5009206 10.4998098 10.7133214 0.3500446 11.9457864 2.9350259 9.5453118 4.3679860 8.4627628 9.1766113 3.8861111 -1.9719967 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5.24730474 9.01610905 8.42901416 7.91077763 9.08477225 4.88611601 10.61074702 9.48140531 1.83547948 9.39281648 11.26639004 6.14707668 8.64008149 9.14806138 7.49573993 11.80959676 3.11559929 8.91535507 10.54899882 3.07253460 NA 11.00254916 4.33191298 12.45865250 12.72330850 7.12089206 9.95183342 10.19021112 9.50082535 2.61310727 1.72857360 NA 6.26175457 8.45335048 9.14837260 6.76960118 4.17787794 9.52177002 7.04772486 9.55756517 8.46276277 10.32074381 0.02814477 13.11845382 4.91077583 3.31353610 10.00976607 6.81747233 7.48961438 9.53245704 8.27843320 9.00970183 4.15741566 13.28216671 1.19805405 11.26355055 1.83547948 8.49879337 4.72857360 8.05604046 7.40099980 13.048588 7.499810 8.938777 11.945786 10.182636 10.838505 3.886111 13.171039 9.227194 11.541986 13.644683 11.716057 9.812360 8.196807 3.276065 8.531960 11.242606 10.618254 5.762843 8.927491 7.622459 6.237589 10.090852 8.253342 6.390078 10.499810 2.835479 3.115599 10.226580 10.143910 13.348477 10.762633 8.090181 8.149668 9.906185 8.427946 10.451327 8.955913 9.938777 9.886116 12.525986 12.485772 10.982331 9.701885 NA 9.528235 9.277248 10.785108 9.102276 10.370243 10.079004 8.508198 14.348565 10.469004 10.378245 12.776380 10.789478 9.646520 2.420455 TCGA-AO-A0J5 48 1 792 705 breast stage iv t4 n1a m1 female 2008 735 yes other specify 2 white not hispanic or latino 8 2 2 NA 2 4 1 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.467973e-07 9.855723 10.383549 11.863451 10.160703 7.281632 7.982273 11.393506 10.001339 10.962342 14.283013 10.573619 11.194058 2.920179 12.771405 3.750253 9.602000 5.657143 8.523940 10.401901 12.539717 NA 14.980234 0.165301 9.246226 10.700564 9.078926 1.335197 9.325160 9.303561 3.252749 8.811848 7.475901 -1.834956 6.101927 10.274793 10.408463 9.888950 11.079300 10.595218 11.803385 11.156279 10.420613 15.566977 9.170141 12.339824 12.018111 11.312335 5.632893 6.819925 9.704448 11.146321 -1.834956 11.317732 4.985469 6.330196 5.119485 10.265951 11.773775 10.870705 12.191466 12.831957 8.075182 11.288117 11.167198 10.555995 11.416919 5.374740 11.682958 12.097965 -0.834699 10.443157 9.129630 3.168899 5.487216 10.793507 10.012346 9.677041 9.897456 3.072174 7.250098 13.340058 11.719998 10.200432 9.676053 -0.3019300 0.5640200 0.8404100 0.0012481 0.0043021 0.0087528 -0.1257700 0.0012481 -0.6326300 0.1767900 -0.1945000 0.0811770 0.0109820 0.0109820 -0.0526660 -0.0526660 -0.6237900 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0044411 -0.0134020 -0.6328600 2.7338000 0.0715350 0.0715350 0.0715350 0.0590800 -0.3044000 -0.3019300 -0.0087146 -0.6333900 0.0087528 0.0087528 -0.1257700 -0.1257700 0.0012481 -0.6229300 0.0029133 0.0000000 -0.0062854 -0.6387200 -0.3073300 -1.2431000 -0.3088200 -0.3088200 0.0109820 0.0109820 -0.0526660 -0.0526660 -0.6237900 -0.0510460 -0.0038779 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0044411 -0.7303800 -0.0134020 -0.6328600 0.0097515 0.0801680 0.0715350 0.0590800 -0.0111980 -0.0109220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 0.000 9.3680249 13.8921721 5.6328934 10.4364599 3.0726546 12.7133280 0.1653010 -0.8346990 8.2907022 7.9661888 NA 8.4353973 3.7198734 9.9226788 9.1737174 NA 9.7726191 9.6344217 10.4624916 9.2560629 10.1353227 7.7521284 11.3006774 3.8377112 9.1475695 10.4090578 4.3747404 -0.8346990 10.5037466 3.6247209 12.2316303 12.1142947 8.3686370 10.3006774 7.7763133 9.2593664 4.1876569 0.1653010 -0.2498223 1.7502635 9.1652887 9.4132162 11.0074427 5.6410228 9.5360416 5.6651341 10.3658809 6.0294750 9.9482871 0.1653010 12.1566335 3.5576061 4.4690720 9.6073976 5.0761400 3.7198734 9.5056953 9.8381560 11.0454462 -0.8346990 13.8376312 0.1653010 10.8210431 NA 7.4553075 6.3844574 7.8482837 8.5586794 12.333605 6.182096 8.479305 12.771405 10.588336 10.407272 12.539717 10.063512 8.509585 11.216479 13.258335 8.453001 9.704448 8.612372 0.165301 8.734195 12.402872 11.164232 6.657141 8.247438 9.354496 7.350164 10.620996 6.482701 6.819925 10.573619 6.956452 5.823500 4.823500 7.673242 12.053271 10.290379 7.943366 8.767988 10.391099 5.801914 11.951501 9.888950 10.302600 9.962950 11.669239 10.114386 10.514570 9.136114 -1.834956 9.034744 5.809144 11.317732 9.282932 10.345350 10.265951 7.589455 13.696759 9.720837 9.995012 12.473770 10.811847 9.363120 2.557606 TCGA-AO-A0J6 61 0 NA 1140 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.496941e-06 5.895554e-07 9.28890897 8.73078259 10.29067448 9.26815037 9.14928401 8.33183910 7.80018096 9.96292680 11.89239907 13.43042185 9.56074934 10.26096386 0.61532212 11.99197350 2.35227830 11.55022487 4.50607506 10.21056299 9.15317098 5.23001467 NA 10.99287753 9.09036335 9.81997850 10.08698062 4.88832438 0.61532212 9.59687273 11.16043084 3.67420074 8.26516025 8.45660781 NA 2.73079210 9.34492612 9.42426960 9.97212425 9.61624447 8.42587719 10.26605810 0.03040671 5.25916324 14.48157016 7.99818873 10.78710567 10.96163447 10.79769978 3.75826053 -0.96973456 9.37685665 10.76208624 NA 8.73424660 4.68855525 6.92516037 3.70276835 9.76801275 11.74383689 10.68810796 10.92894431 12.49022278 8.35452357 10.86580131 10.37455005 9.79479988 9.80306991 3.88832438 12.43068875 8.55390494 0.35230655 10.38211040 10.17945494 1.92273067 3.93723138 8.24344726 8.86639339 10.97084007 10.19587808 0.03040671 4.09643054 13.16585185 11.67926223 9.54653548 9.27708348 0.43108000 0.65277000 0.02104300 0.48148000 1.10400000 0.00624810 0.13243000 -0.58853000 -0.62922000 -0.65501000 1.69440000 0.04188300 0.61643000 -0.07254100 0.00000000 -0.03274800 0.60088000 0.03495900 -0.00954260 -0.63510000 -0.62989000 -0.61479000 0.00762430 0.00762430 0.04287400 -0.01477800 -0.01406400 -0.01406400 0.00583090 -0.60051000 0.01950300 -0.40573000 -0.62503000 -0.62389000 -0.65873000 -0.63874000 -0.63874000 -0.58853000 -0.62903000 -1.29290000 1.52930000 -0.02041200 -0.65052000 -0.01574100 -1.29290000 0.00055459 -0.19081000 -1.02130000 -0.08890400 0.01014600 -0.03274800 -0.58735000 -0.61556000 0.03495900 0.58417000 -0.01601700 -0.63225000 -0.63074000 -0.62507000 0.01852300 0.00762430 0.00762430 -0.63991000 -0.01147300 -0.01406400 -0.26444000 0.58829000 0.48923000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 0.000 7.60777193 11.18294469 NA 8.01048279 2.87332106 10.66515397 0.35230655 4.94920807 9.16541078 7.57337453 -0.96973456 5.77180901 2.88832438 10.30413852 9.24587591 3.75826053 1.93723138 9.64597251 7.24223092 9.79976762 9.43085959 6.57337453 9.99792943 2.27828218 8.50911268 10.04471213 -0.38477206 NA 10.83002931 3.81170735 12.30697627 11.97706651 6.60398975 9.60114734 11.36055961 10.11879991 4.13886361 1.20025323 NA -0.38477206 9.48926214 9.32725914 8.08019129 0.03040671 10.04336200 7.96403352 10.58108974 4.99612658 10.36209966 4.53813460 10.44819551 4.77181165 3.73078123 9.70667473 6.50287157 3.23979517 9.24648243 6.94023606 5.56950324 10.50023909 13.94409724 0.03040671 11.80965194 NA 10.10314550 1.48979980 9.16861471 8.35001494 12.159552 8.872693 8.830434 11.991974 9.163485 11.106992 5.230015 9.464450 9.672846 10.445821 13.394375 12.278789 9.376857 8.007623 -1.969735 7.756561 10.848126 10.4537215 6.6039898 9.3064673 9.1576925 9.5371464 9.6179143 7.8376979 2.8377011 9.5607493 3.1596292 0.8377011 8.3341235 10.1430301 12.3535385 10.9547843 8.1983630 9.4015750 7.9266755 5.4226602 10.0869298 9.9721243 9.6482695 10.1240907 5.2687488 9.6890007 10.6802727 7.8457265 NA 9.5162981 4.8376960 8.7342466 3.7852262 11.1193001 9.7680127 7.5181826 14.0406088 10.0373703 9.6260667 13.1174743 10.7546436 9.2597626 0.3523066 TCGA-AO-A0J7 71 0 NA 618 breast stage iib t2 n1 m0 female 2009 NA yes other specify 3 white not hispanic or latino 3 5 3 NA 3 5 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 9.7011994 9.7080091 11.4772808 9.0259792 8.5990019 8.4235714 10.4054051 8.8888717 10.1153059 13.4515062 8.4592320 10.8831398 5.1031451 12.9228603 2.6056366 9.1374874 6.3125998 7.2630184 10.4441097 13.4201355 0.1031283 14.3084056 5.3636757 10.4103857 11.2029331 6.9857896 -1.4819685 7.6980934 10.6647531 2.2186262 7.7445964 5.0573420 -0.4817670 2.6056366 10.2229527 10.4429970 10.6551755 9.9481142 9.3020012 10.3028193 4.2461040 12.1945823 14.2678706 5.7102802 9.5467812 11.6647531 10.8162470 5.9939189 4.4954649 8.9528126 11.2840920 -0.4817670 9.9688802 3.6056484 3.6056484 4.9105024 10.4198056 12.7138642 9.9893515 10.9719695 12.9006734 8.4280775 10.4239475 10.1252974 10.8347488 10.4843293 5.1906109 11.5302851 10.8505007 NA 10.3154407 9.3846907 3.7276373 3.4723838 11.3939338 10.5195926 10.8096430 9.8139533 -0.4817670 6.1475408 12.3714940 10.3275506 10.5058037 8.8602592 -0.542290 0.423010 0.423010 0.449180 0.451780 -0.543810 0.435130 -0.561070 -0.561070 0.444600 0.444600 0.444600 0.000000 0.012934 -0.553870 -0.556180 -0.556180 0.234730 0.221530 0.216680 0.433280 -0.551660 0.373800 0.373800 0.373800 0.320930 0.320930 0.320930 0.197480 -0.562390 -0.542290 -0.049559 0.440230 -0.543810 -0.543810 0.435130 0.435130 -0.561070 -0.561070 -0.561070 -0.559870 -0.559980 0.444600 0.451390 0.451390 0.420230 0.420230 0.012934 0.012934 -0.553870 -0.553870 -0.556180 -0.556180 0.234730 0.221530 0.221530 0.216680 0.433280 -0.551660 -0.553620 0.373800 0.373800 -0.301690 0.281270 0.320930 0.213300 -0.552860 -0.309210 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 0.000 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 0.000 7.6293202 13.4302317 5.8757358 9.0993849 3.5625844 10.0050194 1.9776096 NA 8.1923767 7.8513399 NA 7.2220877 2.6056366 10.7592738 10.0960852 2.5181826 5.6980934 9.5209995 9.3494916 10.0524874 8.5795151 8.2896740 9.5612118 0.5182330 11.3030237 10.0446837 1.1031283 -1.4819685 10.6122621 0.8401208 13.4790914 12.2012887 6.6474671 9.1319740 6.4781872 9.9211965 5.7661128 0.5182330 1.3255591 9.4789103 9.6116019 9.4038808 8.9158591 2.6881132 7.5068693 7.6830915 11.1737152 4.3761653 9.8845067 NA 13.4095884 2.2186262 3.0417511 8.9654848 6.9722366 0.5182330 8.5011780 6.4665521 3.8757408 NA 14.2517294 -0.4817670 10.8082033 NA 8.5680329 3.2730682 5.9857896 9.7607632 11.581977 5.884508 8.179962 12.922860 10.606310 11.015288 13.420135 12.569818 8.557103 10.576514 13.158994 12.362596 8.952813 9.200301 -1.481969 8.132895 10.837857 11.1618152 7.7755721 8.3077181 9.7172432 9.7761614 11.1054978 4.6474699 8.4868511 8.4592320 5.0100368 1.6880908 6.7943093 8.1078170 9.3746100 10.6808904 9.6755314 8.3223153 12.5033148 3.3255447 11.1753242 10.6551755 11.7376555 9.5460903 11.3650460 9.0641141 11.0390486 8.1656427 NA 8.2638588 2.9776096 9.9688802 5.8580332 10.8409576 10.4198056 6.9486371 14.0470048 10.3585690 9.8691236 12.3312641 10.3966186 9.6956040 0.8401208 TCGA-AO-A0J8 61 0 NA 680 breast stage iia t2 n0 (i+) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 5 5 2 NA 2 2 1 1 3 1 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 10.218815 9.606605 12.172982 9.396369 8.422939 9.950250 10.765568 9.383981 9.332214 8.495833 10.992905 10.431077 1.462419 13.319861 1.703411 9.147637 7.994501 7.973084 10.296163 13.300253 2.587941 14.154847 7.360530 10.027772 10.869098 9.899311 NA 10.954992 8.319260 2.172903 7.462411 7.150184 13.892388 3.617686 10.180087 9.710338 10.465736 11.152249 9.577099 11.206938 -1.997117 10.353365 14.403541 7.742152 10.169769 11.639943 11.149547 4.897797 5.478713 8.186614 11.551198 -1.997117 11.099694 5.192802 6.283750 5.202653 10.364374 11.810535 11.025867 11.444885 12.905071 8.943292 10.941272 10.668257 11.264780 10.918671 5.306758 12.022656 9.983832 -1.997117 10.356125 9.136121 2.508226 5.526541 11.204490 9.905354 10.199888 9.465481 2.172903 10.758909 13.704177 12.357917 10.742970 9.663420 0.79329000 1.36720000 1.36720000 0.00064569 0.00064569 0.00258810 0.00564420 -0.76999000 -0.76195000 0.00156530 0.00156530 -0.00517020 0.00564420 0.00564420 -0.03349900 -0.03349900 -0.03349900 -0.00461700 -0.00461700 0.00793700 -0.00101770 -0.00129480 -0.00262880 -0.00262880 -0.00262880 -0.00323340 -0.00323340 -0.00392530 -0.00627600 0.00092306 -0.00046340 -0.01083100 0.00064569 0.00258810 0.00258810 0.00564420 0.00000000 -0.76999000 -0.76195000 -0.77331000 0.00161660 0.00161660 0.00156530 0.00286570 0.00286570 0.00286570 0.00578320 0.00564420 0.00564420 -0.03349900 -0.03349900 -0.03349900 -0.02210500 -0.00461700 -0.00337180 -0.00337180 0.00196000 -0.00101770 -0.00129480 -0.76221000 -0.00262880 -0.00262880 0.00369890 -0.00323340 -0.00392530 -0.00627600 0.00620040 -0.75464000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.712 -0.050 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.712 -0.050 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.541167490 13.831065521 6.058260207 9.958628546 4.042775645 10.650661896 1.002954498 NA 8.708611110 8.071756771 0.003026483 7.489693048 2.957171707 10.378832596 9.433953839 1.462418837 8.022569221 9.273273897 9.892482558 9.876807145 9.953622027 7.351706942 10.449286613 3.132264252 9.974881311 9.389918882 2.587940994 NA 10.791289160 1.703410828 12.642601965 12.270204235 7.371484809 9.113461933 9.531432734 9.336693105 4.823158305 0.587940994 -0.997117491 5.764529283 9.210603164 9.525560155 9.587941181 2.860962798 8.858602402 5.797394359 10.524333670 5.518679905 9.364374136 NA 12.559963586 3.090446980 3.250900955 9.832404130 7.490295748 3.212429265 9.407587926 7.331653271 5.632335113 1.324925784 13.977236359 -0.411963028 10.122568286 NA 8.580407447 4.757865995 7.606605085 9.232398381 13.069330 4.945495 8.423992 13.319861 10.575916 11.362591 13.300253 12.086209 9.347829 10.951528 13.627774 8.901580 8.186614 9.233600 -0.411963 7.322651 11.258007 10.976497 7.747812 8.967319 9.287803 8.133549 10.323793 7.058261 7.369301 10.992905 7.047373 3.288388 6.246153 6.351706 11.535335 10.587002 8.549873 8.594501 12.337601 5.260368 11.109594 10.465736 10.806504 10.356125 10.311886 8.985972 10.982582 9.086458 -0.411963 9.372080 5.025348 11.099694 6.983118 10.413078 10.364374 7.677171 13.955265 10.418456 10.547943 13.435227 10.227885 9.447476 2.324897 TCGA-AO-A0J9 61 0 NA 1613 breast stage iiic t2 n3 m0 female 2007 NA yes infiltrating lobular carcinoma 15 white not hispanic or latino 8 2 3 NA 2 5 3 4 3 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 5.548757e-07 9.686096 9.492636 10.490188 7.717123 8.660204 9.562637 8.508846 10.160483 10.268204 9.270107 9.271058 10.392663 4.431021 11.515681 3.951028 10.512468 7.015985 8.696040 9.675364 12.681544 2.403540 13.792222 6.779918 10.705566 9.913774 4.317811 -1.296899 10.267237 9.972813 3.988503 7.214854 6.795859 9.524876 4.346957 7.719910 10.572696 9.556412 10.976315 9.011441 10.183892 3.790564 10.581536 15.034789 6.885148 9.527265 10.780586 10.582685 4.951028 -1.296899 8.581153 11.593556 NA 11.717471 6.339727 6.361314 6.697456 10.407006 12.520785 11.228868 11.460284 12.586700 8.457990 11.147599 10.422491 10.736525 10.484462 3.226663 11.416274 10.592226 1.510456 10.687521 7.983873 3.660552 4.969887 11.611870 10.125167 9.720606 9.055145 2.951028 6.927104 13.300282 12.006883 9.737901 10.413048 0.00232990 1.01050000 0.99954000 -0.00484610 -0.00484610 -0.01202400 0.66427000 -0.00622860 -0.00622860 -0.33595000 -0.33595000 -0.33595000 0.01000600 0.35862000 -0.32368000 -0.32368000 -0.32368000 0.63993000 0.63993000 -0.00097017 0.01642500 -0.25783000 0.04103400 0.04103400 0.04103400 0.04244900 0.03693800 0.03693800 0.39463000 -0.30228000 0.00232990 0.01070300 -0.00484610 0.02777800 -0.01202400 0.66427000 0.66427000 -0.00622860 -0.00622860 -0.00622860 0.00000000 0.00000000 -0.33595000 0.36070000 0.36070000 0.02701600 0.02701600 0.35862000 0.39147000 -0.33352000 -0.32368000 -0.32368000 -0.32920000 0.63993000 0.63993000 0.63993000 -0.00097017 0.01642500 -0.24496000 -0.32396000 0.04103400 0.04103400 0.00554090 0.04244900 0.03693800 0.39463000 0.01098200 -0.30944000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.997 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 0.000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.997 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 0.000 9.3260690 12.3211434 5.7799189 10.3742008 2.4189995 11.0045984 1.8730257 1.5104556 8.6703284 9.3746433 NA 8.6323606 6.5296507 10.3944094 8.8929268 3.0954181 8.6932061 8.9581307 7.1989567 10.3613136 9.0722958 6.6219654 12.7565190 3.0954181 8.0672370 10.2374050 6.1293675 0.7031007 10.9815516 2.9510282 13.6518344 11.8428134 8.7971797 9.7310081 8.8654936 10.1676480 4.4035404 3.9125541 1.0250288 8.6485460 8.6129953 10.5517251 9.4621581 8.6558434 6.8371182 6.8323850 10.3447024 5.8426546 9.5895609 1.8730257 11.0085940 -1.2968993 5.0250288 9.8826443 6.1239041 3.9125541 9.3406326 8.5811531 6.9604897 2.0250288 15.6961290 1.5104556 10.3662154 NA 8.4173475 7.0473977 8.2128772 8.7664971 10.829600 5.941508 8.246134 11.515681 10.458407 11.177822 12.681544 10.102914 8.547023 10.273907 12.868637 9.833029 8.581153 9.914382 5.042951 6.857920 11.397460 11.036817 7.965197 8.965174 9.255771 7.969889 10.244784 7.272958 8.732389 9.271058 7.047398 3.162532 5.573465 7.569082 10.376853 10.830129 8.190942 9.225684 9.828516 5.444568 12.204851 9.556412 11.189686 9.521684 10.675005 9.470459 10.690721 7.639740 NA 8.836604 5.375526 11.717471 6.837528 10.595265 10.407006 7.389603 15.472927 10.346056 10.700987 12.228133 10.772216 9.871774 1.288063 TCGA-AO-A0JA 36 0 NA 655 breast stage iiic t2 n3 m0 female 2009 NA no infiltrating ductal carcinoma 11 black or african american not hispanic or latino 2 2 2 1 NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 9.79884859 10.66440097 11.77796979 9.98927613 8.24779368 9.39122554 10.16725204 10.13409551 10.12043346 13.62378142 10.94939274 10.82126034 0.49794442 12.29761041 4.02148861 8.99177947 7.42570183 8.89773596 9.28582664 12.84215058 0.08283881 13.16708593 4.62720993 8.10525430 11.33811188 6.58007311 -1.50225991 11.81347130 9.88701753 3.19836842 8.78563653 7.56401303 0.08283881 4.90731372 10.43750325 11.05059311 9.79082074 11.82126034 10.42496123 11.85959372 13.77346660 11.44866220 15.06470650 9.56208746 10.23474033 11.29781274 11.23517142 4.66784672 4.83777172 9.33791509 13.68093905 NA 11.01288463 6.91155138 6.63234966 5.33081293 11.27866887 11.98513603 10.39425646 12.51751478 13.06558310 8.82097893 10.85904537 10.50553658 11.71815122 10.91313767 5.21216853 12.71011643 9.45792605 -1.50225991 10.31650624 8.45792584 3.62761851 6.75058909 10.75590112 10.42829181 9.69636912 9.56670234 1.81987252 9.83554596 13.60644850 11.53512779 10.33870196 9.58140341 -0.65848000 0.62018000 0.59999000 0.03242200 0.00917050 0.00218630 0.00917050 0.00000000 0.00000000 0.66493000 0.66493000 0.01064000 0.00573840 -0.64790000 -0.66003000 0.01474900 -0.66040000 0.00221930 -0.01155800 -0.00013862 0.01782400 0.03521100 -0.63897000 -0.63897000 0.02707600 -0.00221680 -0.00221680 -0.00221680 0.03721700 -0.61383000 -0.65848000 -0.01037000 -0.65640000 -0.01188700 0.00218630 0.00917050 -0.00083160 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.66493000 -0.64959000 -0.65480000 0.01684500 0.02848100 -0.64790000 -0.64790000 0.01670500 0.01474900 -0.65892000 -0.65854000 0.00221930 0.00319100 0.00319100 -0.00013862 0.01782400 0.03397200 -0.63311000 -0.63897000 -0.63897000 -0.66633000 -0.00221680 -0.00221680 0.03721700 0.02848100 -0.61777000 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 -0.169 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 -0.169 8.97568234 13.61617572 7.34027473 10.41417677 3.38203083 11.48020462 2.81985208 -1.50225991 8.23263390 7.47806337 NA 9.52521501 1.95735747 10.71800005 9.16414793 1.30527016 9.10340348 9.36751784 10.27682255 10.85217343 10.16553677 7.81985208 10.39236294 3.35590428 7.59858629 9.75707877 2.89023266 -0.50205558 10.63811476 2.81985208 11.65068420 11.33200000 8.35434945 10.30729031 8.68898319 9.39803606 4.52029023 1.95735747 0.81983165 1.95735747 8.81194074 9.42050851 11.17740415 4.66784672 9.35369578 5.79254565 9.65084263 5.73632886 9.80170480 NA 12.42533352 3.95735747 3.78333092 10.19051770 5.77674621 6.07535292 9.82210457 8.57072666 9.37750728 0.08283881 13.47032053 0.08283881 10.50565219 NA 8.27928370 6.10525483 8.30527882 9.59595618 13.0088736 5.3052775 8.7255401 12.2976104 10.5060024 10.6568492 12.8421506 12.0115283 8.6489407 10.8902039 13.5148629 9.2258444 9.3379151 8.0057189 -0.5020556 7.1236331 11.6358758 11.460097 9.053472 8.436034 9.187048 8.077240 10.995871 6.953251 8.924189 10.949393 7.803986 3.989775 5.368290 6.808718 11.342826 10.878385 9.414550 9.123633 12.566786 5.463707 11.972089 9.790821 10.701884 9.749406 10.954535 10.063978 11.085467 9.011652 NA 9.156341 6.707377 11.012885 8.015593 10.233903 11.278669 7.029306 12.740726 9.406317 10.124546 12.495192 10.829121 9.410065 1.497944 TCGA-AO-A0JB 50 0 NA 1542 breast stage iiia t3 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 4 5 1 5 3 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.595268e-06 4.161568e-07 9.2268437 7.8783213 10.4688650 6.0667673 9.6018038 8.9950885 9.6712252 9.9795337 10.8550687 12.3392773 10.0388965 10.2658379 0.4520682 12.0142991 2.4520682 10.5248592 8.5127527 8.6517291 8.2722355 11.9533963 1.4520682 13.7927413 5.1524958 10.7677950 10.9667708 7.3346997 4.6999846 11.8276392 11.0621588 3.6219815 9.2432197 6.6808757 NA 4.3589448 7.7094444 8.7603956 8.9114882 9.8991400 8.4854796 10.3453582 12.7258523 11.2746275 14.2731331 6.5239477 10.4018834 9.5813398 9.2690404 4.8443756 NA 7.4062526 11.2626283 NA 10.7974620 4.9756164 4.0370219 4.4520550 9.6952307 11.9970211 10.2448470 12.3297243 12.4995215 7.6517291 10.0959128 9.4771963 10.5100484 10.9368796 3.0370132 11.6424987 10.0162062 3.4520550 9.9834381 8.6468136 5.0959118 3.6219815 9.9795337 10.4548717 10.9114883 9.3619497 2.0370307 10.0370192 12.3177900 12.1888814 9.3945712 10.5019052 0.00869270 0.51761000 -0.70383000 0.69373000 -0.03931600 0.00563190 -0.67641000 -0.00028722 -0.00324560 0.10054000 0.00768570 1.81200000 0.02182300 0.02701500 -0.68733000 0.04168000 0.04168000 0.05459900 -0.00255350 1.28040000 0.03518800 2.16600000 -0.67218000 -0.69387000 0.63181000 -0.00753150 0.00000000 0.00000000 0.69364000 0.00869270 0.00869270 -0.67411000 -0.63995000 -0.67522000 0.00410330 -0.00849810 -0.70212000 0.03988900 -0.00324560 0.02940500 0.60459000 0.61998000 -0.68090000 -0.38933000 0.03489900 0.03489900 0.03489900 0.02701500 -0.66859000 -0.67907000 0.60676000 0.01622500 0.09573600 -0.00311920 -0.70059000 -0.66794000 0.39724000 0.01678400 -0.67531000 -0.16388000 -0.67218000 -0.69387000 -0.67595000 -0.00753150 0.00000000 -0.02294000 -0.68058000 -0.58994000 0.000 0.000 -0.679 0.000 0.000 0.000 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.679 0.000 0.000 0.000 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 8.5288721 11.8609171 6.0066459 9.2399593 3.7739858 11.5560001 3.9114903 3.2594081 8.8400739 8.5073392 NA 8.3247008 4.4520550 11.2497182 9.4492362 3.2594081 7.5073388 8.4964508 8.7784862 13.7211834 8.9623460 7.5500888 11.2276670 1.4520682 8.3709201 10.0686055 8.1935239 NA 11.4098842 3.4520550 14.3827940 13.2580020 8.0142989 9.4548717 8.1935239 11.4548717 4.0370219 0.4520682 NA 7.5181456 9.2529565 12.5151147 8.9638093 5.8783207 7.4469757 9.2301338 9.9931532 5.3589483 9.5154517 1.4520682 13.0763952 NA 4.3589448 9.9630384 7.5706861 3.7739858 8.7649396 7.7281811 10.4646812 6.3827935 14.8819211 NA 10.7512647 NA 9.4464101 6.2594119 7.7829733 8.2849467 12.153991 6.259412 8.844374 12.014299 11.698797 10.457681 11.953396 12.858262 8.840074 9.510048 12.463983 11.072277 7.406253 8.915581 4.452055 7.998951 9.835761 11.032315 4.152500 8.601652 8.534206 5.037018 10.364976 6.621982 8.117393 10.038896 7.081413 1.452068 8.193524 7.990517 10.403341 10.433624 8.316243 11.297547 8.626982 5.310038 13.259053 8.911488 10.812904 11.355939 10.117393 10.090493 10.896036 6.791907 2.452068 9.051226 6.661510 10.797462 5.310038 11.455202 9.695231 7.927790 15.868161 10.423600 10.427905 11.293621 11.584556 9.735145 3.259408 TCGA-AO-A0JC 64 0 NA 1547 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 7 2 2 4 3 5 3 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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8.5914356 10.8238524 10.7892910 10.3915201 10.1996809 3.0563581 6.7332499 13.3177175 13.7352893 9.9441466 9.5175212 0.00416340 0.09521700 0.09521700 -0.00360110 -0.00360110 -0.00442340 0.10804000 -0.00013862 -0.00401620 -0.00069303 -0.00069303 -0.00069303 0.00388540 0.00388540 0.00000000 0.00000000 0.00000000 0.00819590 -0.00290910 -0.00055444 0.00569190 0.01195300 0.01307400 0.01307400 0.01307400 0.01416500 0.01029800 0.01576600 0.01153900 0.00416340 0.00416340 -0.00429290 -0.00360110 -0.00447360 -0.00857760 0.10804000 0.10804000 -0.00013862 -0.00401620 -0.00401620 -0.00138580 -0.00138580 -0.00069303 0.00708260 0.00708260 0.00708260 0.00708260 0.00388540 0.00388540 0.00000000 0.00000000 0.00000000 0.00000000 0.00138680 -0.00290910 -0.00290910 -0.00055444 0.00569190 0.01558700 -0.10434000 0.01307400 0.01307400 0.00750000 0.02749700 0.01576600 0.01153900 0.00805670 0.01824300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 12.9547674 10.7328788 0.8084262 8.7287902 9.6971198 10.1953776 10.4377940 0.3934162 8.8446110 5.9883461 -0.1914914 6.6349853 2.6157929 10.0221492 10.0081097 4.3002922 11.6312073 8.3002903 8.8154646 9.4540959 9.3306364 8.0705321 10.5881567 3.9377210 7.1076450 10.8196646 4.6910819 NA 11.8975567 3.8084365 14.0754800 11.8919167 7.3042920 10.4194621 10.1252846 9.0456472 4.0178863 3.4522923 0.8084262 3.9377210 8.8459842 9.9428637 9.2399350 5.5226835 4.8347972 6.2430654 10.4997447 4.1303626 9.3407932 0.3934162 9.0810671 5.6788015 4.7857179 9.1390855 4.9559497 10.5815766 10.1064999 9.7480165 10.0300245 5.9982610 14.3814928 4.8084365 10.3162320 -1.1916561 9.2167672 5.8852522 7.4949380 8.4102079 11.206275 6.183477 9.094995 10.019717 11.333958 10.009336 10.543147 10.164889 9.423147 11.101047 13.489676 10.566661 9.459489 7.750952 2.393389 8.008110 11.451617 10.459938 4.200755 9.191061 9.681881 8.415768 9.817405 11.330038 9.808437 11.503013 6.308283 1.978379 4.393402 8.832427 9.634191 12.423377 7.879900 8.410208 10.266331 10.505405 13.398553 9.930618 11.012703 9.957549 10.107645 10.568326 10.646853 8.247229 NA 10.531940 11.875031 11.173393 5.437794 11.726928 11.054287 8.089278 14.772327 10.102484 11.304043 12.151623 11.373301 10.318707 4.589799 TCGA-AO-A0JD 59 0 NA 2190 breast stage iiia t3 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 6 3 1 1 1 5 2 4 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.496941e-06 5.895554e-07 10.1761653 10.4171373 11.6340179 9.0150105 8.5497966 9.2586796 9.9340905 9.9223907 9.2569062 13.0159938 10.9108771 10.6355543 3.5897994 12.1920295 2.0492125 7.5056742 3.5897994 8.7177888 8.3177151 12.7620658 3.0492300 13.1334910 4.7597204 9.0356888 11.1032755 7.2971538 1.1747260 10.9790468 10.7805453 0.9117299 6.5381625 7.4035762 3.2336580 3.2336580 9.9810382 10.8711451 9.5461708 10.9001234 10.5756365 10.3963443 -0.4102365 11.4851806 13.9153109 6.9445727 9.3202647 8.3546664 11.0379109 2.8377213 NA 9.3662276 13.5038994 NA 8.6245937 4.1133588 5.6450762 4.8935758 11.2600082 12.4541742 10.7842437 11.2884992 12.5890900 7.6121623 11.6845321 10.3329460 10.6403235 10.9387993 5.2304720 12.4279152 10.4364602 NA 10.3409202 9.3825849 2.9138947 4.9473482 10.8013787 10.6464323 9.9991856 9.9190303 8.1691108 7.5026838 12.4556245 11.1008059 10.3104663 8.2354528 -0.4952400 0.1592500 0.7329000 0.0485900 0.0000000 0.1174600 0.0246320 0.1000600 0.0071387 0.1422600 0.1422600 -0.4957600 -0.0449150 -0.4898100 0.3913600 3.1799000 -0.4830900 0.1329200 0.1329200 0.0013824 -0.0480290 0.4975800 0.1872700 -0.4559400 -0.4695800 -0.1020600 -0.1020600 -0.4858300 0.1774200 -0.2798500 -0.5005600 -0.4627700 0.0485900 0.1174600 -0.2307600 0.0246320 0.0501530 -0.5477100 0.0371210 0.5870900 0.1670500 -0.5492200 -0.0254740 0.0446180 -0.5078100 -0.4733900 -0.4544400 -0.9425900 -0.4861400 -0.4845700 -0.4909600 -0.4998500 -0.4878200 0.1329200 0.1349900 -0.4889700 0.0359910 0.1489500 -0.1506300 -0.4606400 -0.4474600 -0.4559400 -0.7145900 -0.1020600 -0.1458800 0.1507600 -0.1859300 -0.4532600 -0.484 -0.484 0.000 0.000 0.133 0.133 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.484 -0.484 0.000 0.000 0.133 0.133 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 0.000 8.0055364 10.9574823 7.5954194 9.2675143 3.8752001 10.7830119 NA -1.4100448 9.5279039 7.6799072 NA 6.2345875 4.3971526 10.9434928 9.1915654 1.1747260 7.0034223 10.3575652 10.2475597 11.2869794 11.1536677 6.3842104 9.9351998 0.5897635 8.8890025 8.8647551 2.3971458 -1.4100448 10.0861491 2.3971458 12.7752121 12.3181403 7.5926095 10.4955577 8.7061385 9.6565566 8.1054942 1.7597098 -1.4100448 7.6531897 8.8222155 8.9853288 9.7061385 2.9821083 8.3769953 6.7190780 10.3459339 6.6010220 9.7572128 NA 9.8204155 2.1747579 3.2336580 10.8411320 6.2053143 3.9473482 8.1785090 7.5613384 5.8089642 6.6450776 14.4817444 NA 10.1980494 -0.4102365 7.3278867 3.5439907 7.1211760 9.3752471 13.531106 6.304040 8.947346 12.192029 10.292400 12.075121 12.762066 12.289150 8.788240 10.587934 12.467366 11.152991 9.366228 8.974578 2.049213 7.045122 10.714239 10.3130289 7.3842104 8.5982234 8.1803816 8.7857820 9.8663436 6.0160595 5.1747579 10.9108771 8.0956059 1.7597098 5.3177165 8.6864701 9.6759308 9.3931184 9.7678368 9.3321039 11.9872018 5.2336504 10.7515248 9.5461708 10.7575264 9.1123762 11.5783018 8.1785090 10.1099222 9.2954269 NA 8.7631094 5.3971492 8.6245937 4.5897934 9.3438470 11.2600082 7.9756571 13.8071844 10.8632988 10.6815606 11.9500930 10.7232579 8.5982234 0.9117299 TCGA-AO-A0JE 53 0 NA 2335 breast stage iiia t2 n2a m0 female 2005 NA yes infiltrating ductal carcinoma 8 black or african american not hispanic or latino 6 3 1 2 1 6 2 6 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 9.9035946 10.1252012 10.9060368 9.1204771 8.7012274 10.5699326 9.1516830 9.6105532 11.4576764 14.2954756 10.1019570 10.7718845 0.6983963 15.5637590 4.3708408 9.1392815 7.4126579 8.5625985 8.7332113 12.0087411 NA 11.4810011 4.0907264 9.9512433 10.7356161 8.5454696 3.3422703 10.7705450 10.9145519 -1.3015148 7.6022943 7.6899344 2.1578522 6.0907307 9.6518814 9.7911696 8.9212072 10.9383092 10.0998253 9.8270511 4.2219776 9.5672349 15.2463010 7.6593702 10.0163732 10.7228595 11.1130976 3.6053047 2.6984185 8.9090836 12.7766466 1.5057893 11.2158357 6.1162649 7.6053032 5.5313035 10.1568190 11.8954754 10.2190310 11.8422738 12.6566025 7.4160890 10.9233184 9.9592555 11.1270343 10.6431244 4.0203422 11.6276708 9.9175809 NA 10.3966829 8.7577567 2.2244725 6.4126579 10.9698754 9.8795646 9.7214737 9.7872006 3.6526127 10.0095930 13.0443027 12.2173113 9.4912027 10.3503610 0.01226700 0.41614000 0.80182000 0.00989710 0.03569500 0.05996800 1.18790000 -0.00440130 0.03146700 -0.48940000 -0.48940000 1.90580000 -0.00481630 -0.00481630 -0.01144300 0.75738000 0.75738000 0.03400300 0.00794760 -0.38412000 0.36169000 0.00141680 -0.51688000 2.65870000 0.07013000 -0.05533500 0.77276000 0.45585000 0.35875000 -0.52602000 0.01226700 -0.51247000 -0.48602000 -0.05290700 0.05511300 -0.02914500 -0.02914500 -0.00440130 -0.45798000 0.00419320 0.00058456 -0.47232000 -0.47382000 -0.47208000 -0.46736000 -0.02750500 -0.02750500 -0.00481630 -0.01282400 -0.01144300 -0.05937500 -0.49463000 -0.49463000 0.03400300 0.00794760 0.00794760 -0.40768000 0.34942000 -0.01846100 -0.12384000 -0.50565000 0.07013000 -0.04939500 -0.06463000 -0.51638000 0.78624000 -0.52281000 -0.05681700 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.349 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 0.000 -0.462 -0.482 0.000 -0.440 0.000 -0.377 -0.179 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.349 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 0.000 -0.462 -0.482 0.000 -0.440 0.000 -0.377 -0.179 9.3699535 14.3331100 7.0293292 9.5105897 4.1545589 10.7519989 0.2833292 1.2833884 7.8147561 8.5121937 -1.3015148 8.6255237 2.7858853 10.8344422 9.0636413 2.9463379 8.3866627 9.4665967 10.6079305 11.0135619 10.2988503 8.4928282 11.4092188 2.3988429 7.4632840 10.1761707 5.3849132 -1.3015148 10.6511536 4.2529984 12.8116662 12.6366136 8.8095479 9.4748455 11.3038919 8.8570221 4.3422703 3.0203422 NA 1.0203422 8.7180030 10.2553973 8.0021934 3.5057639 8.9747693 8.1700878 9.6075554 7.7536948 9.4993123 NA 10.4599636 4.6984130 4.1578441 9.4143658 7.1035543 7.2644661 9.4887608 8.7738915 8.8225335 6.1578441 13.7058777 -1.3015148 10.5269456 NA 8.0950172 5.3131225 7.4398791 7.8931692 12.6343104 8.5041564 8.6913506 15.5637590 10.1792025 11.5177931 12.0087411 9.2288187 10.1917674 10.6083055 12.7013153 10.4628693 8.9090836 11.7356161 0.6983963 7.5810552 10.3870998 11.106477 6.574930 8.923620 8.769875 9.174146 9.890539 8.139282 5.466598 10.101957 8.667079 7.206207 6.391900 7.804531 12.793067 10.388847 8.960190 7.993033 10.206702 8.031568 10.420904 8.921207 10.874586 10.013562 10.857968 9.853863 10.733555 8.875832 8.859544 8.983109 8.196264 11.215836 8.773892 10.527342 10.156819 8.123377 13.761934 9.825117 9.811503 13.469799 10.817678 9.005613 3.652613 TCGA-AO-A0JF 68 0 NA 1980 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 8 2 2 3 2 2 3 4 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 10.2669377 10.2601719 11.7156112 9.9540935 8.0148418 9.4115419 10.2058111 10.0249885 10.0324195 13.2965565 10.8632554 10.4345609 0.2053925 12.8103580 4.1439403 9.9075143 5.4907434 8.3819301 7.7393202 12.7771732 -0.3796951 12.8644455 6.5030227 9.2681972 9.9773811 7.6260039 0.6203987 12.9364484 9.7051874 4.6203811 7.6005188 8.0212587 1.2053299 5.5392426 9.8527999 10.9298554 10.2817118 10.5034041 10.2826023 11.4259214 9.3086294 10.5796566 14.8923526 8.0306605 9.5811051 11.4785544 11.4147949 4.5745738 4.1439403 9.4074654 12.3457453 -1.3796951 11.7877972 5.9691067 7.1517604 5.5976593 11.0089345 11.5070283 10.3639512 11.9960973 12.7414268 7.9034674 11.1385404 10.9736444 11.5958688 10.9916112 4.8871646 12.2942402 8.8419662 -0.3796951 10.1892852 8.8953396 2.3263648 6.1826208 10.3389119 9.9613417 9.6803994 10.0895121 3.3752619 9.6441333 12.5743935 12.1036910 9.8994092 9.3138660 0.00083195 0.43081000 0.36914000 -0.00443120 -0.00443120 -0.00678130 0.00499690 -0.00539920 -0.00539920 0.00019805 0.00019805 0.00624810 0.00100120 0.00142410 -0.02958400 -0.02958400 -0.02958400 0.00597000 -0.00423050 -0.00180140 0.00346870 0.00597000 0.00458000 0.00458000 0.00458000 0.00271080 0.00271080 0.00777830 0.01628600 0.00958830 -0.00163540 0.00000000 -0.00443120 -0.00678130 -0.00678130 -0.00138580 -0.00313310 -0.00539920 -0.00539920 -0.00539920 0.00083195 0.00083195 0.01084200 0.00195160 0.00195160 0.00346870 0.00346870 0.00142410 0.01474900 -0.02958400 -0.02958400 -0.36918000 -0.07454400 -0.00275590 -0.00423050 -0.00423050 -0.00180140 0.00346870 0.00597000 -0.41915000 0.00458000 0.00458000 0.00666530 0.00271080 0.00777830 0.01628600 0.00708260 0.01193700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1921318 13.0982005 3.7903029 10.3095034 3.4277402 10.2337081 1.4277134 0.6203987 8.2642352 8.7184113 NA 8.9078491 3.3752619 10.3393400 8.9321273 1.7903133 10.1566263 9.7921814 10.7088360 9.8912583 9.8472307 7.2460879 12.0017868 4.4277335 8.4131692 9.8401526 4.2928038 -1.3796951 10.5705704 3.3752619 12.5712994 12.0800668 9.3103769 10.7486956 8.1341064 9.0030031 4.9779301 1.9423081 -1.3796951 2.5272706 8.7535213 9.6260036 10.7631243 7.1634112 7.3500676 6.2857148 10.1821443 6.8491974 9.6196744 NA 11.6783708 3.9423081 5.4147952 9.8532556 5.9686645 3.0798048 9.6647731 9.7675840 4.9954167 5.5511161 13.3320998 2.3208312 10.1271825 NA 8.0674623 6.8002878 8.0550074 9.2714308 12.527645 4.112233 8.531771 12.810358 9.985608 10.728577 12.777173 12.314955 8.905099 10.940333 13.443199 9.500728 9.407465 9.874817 NA 7.275015 11.175208 11.2253955 6.4405586 9.0116225 8.4261230 7.9309916 10.4028285 7.0297698 8.3121224 10.8632554 6.9602290 0.6203987 3.3208168 5.3266344 11.6331782 10.2866030 8.0403390 8.4999623 12.8352294 5.6427478 11.3438757 10.2817118 10.4760262 9.4033772 11.1795171 10.5632601 10.5606926 9.6756614 -1.3796951 9.1625404 4.4277335 11.7877972 8.4564296 10.0979653 11.0089345 7.2642352 13.8177877 10.2114338 10.6575828 13.1139218 10.0638406 9.3852507 2.9423081 TCGA-AO-A0JG 49 0 NA 798 breast stage iiia t2 n2a m0 female 2009 NA yes other specify 4 white not hispanic or latino 8 2 1 1 3 5 3 4 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3942239 10.7041619 12.4929502 9.7728869 8.6469431 9.3836885 10.2461519 10.0803103 9.8258948 13.9769705 11.9226553 11.3422909 -0.7083964 12.5887949 4.9063038 9.0347434 5.6579143 8.7262202 8.6688024 13.4693230 -0.1234339 15.5094456 4.9920297 8.8197825 10.4627688 9.4362503 NA 11.4953988 9.3236378 2.1984942 7.3250149 7.0794944 -1.7083964 5.5583779 10.1553912 10.3994629 9.7723822 10.2588183 9.8447412 12.0408330 5.7510245 10.1323699 14.5085462 8.6766994 12.3933199 11.0175972 11.3480604 5.1117700 8.7632672 9.8292957 11.1296141 1.0989585 11.3702432 5.6666316 7.0827547 4.8614492 10.0452266 12.1935902 10.2074713 11.8679583 13.2297013 7.8307510 11.0647312 11.3191819 11.6796093 11.0933004 5.4413407 11.9439889 12.9163875 NA 9.8053195 8.6513416 4.5828992 5.2915925 10.4618301 10.2406891 10.6988598 9.5987928 2.1984942 8.0548045 12.8950445 11.6451524 10.3239821 9.7510236 0.00541390 0.47426000 0.48527000 -0.51187000 0.00805670 0.00283280 0.00346870 0.66974000 -0.51640000 -0.51692000 -0.51692000 0.00000000 -0.00166290 -0.00166290 0.00374650 1.43050000 3.65690000 -0.00097017 -0.00097017 0.00360760 -0.00263220 -0.00083160 -0.00055444 -0.50567000 2.23160000 -0.00166290 -0.00166290 -0.00166290 0.00402430 -0.51373000 0.00541390 -0.00705760 -0.51187000 0.00283280 0.00718710 0.00346870 0.00346870 -0.52808000 -0.51640000 -0.51640000 0.00263570 0.00263570 -0.51692000 0.00263570 0.00263570 0.00263570 0.00263570 -0.00166290 -0.00166290 0.00305220 -0.50525000 -0.51486000 -0.51486000 -0.00097017 -0.00097017 -0.00097017 -0.51702000 -0.00263220 -0.00083160 0.00194180 -0.52328000 -0.50567000 0.00469070 -0.00166290 -0.00166290 0.00402430 -0.00360110 -0.51897000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 9.8190691 12.4644883 8.2282300 9.8278392 5.6292138 10.9892112 4.4615155 -0.7083964 8.5700416 8.5059112 -0.7083964 7.8877817 3.0464736 9.9399495 9.6590067 1.0989585 9.8933628 10.3198435 7.8877817 10.0803103 10.2606331 8.2774339 11.4715011 3.0464736 9.2852381 9.6871261 3.7834462 NA 11.4610473 4.2223332 12.0828567 11.3250150 8.7209987 9.9163875 8.5839135 9.2311712 6.0597771 1.9920433 NA 2.4615286 8.4665178 8.4789439 11.1611859 7.7009827 6.4222650 7.4937162 10.7049555 5.9209483 9.9989511 NA 11.7838208 3.1984784 6.2688723 9.4115707 5.9140837 5.8765538 9.2738725 8.7094447 10.1788126 -0.7083964 13.6837753 2.7510137 10.9872553 NA 6.8952178 6.8033446 8.2074712 8.1879246 14.552703 5.529996 8.503480 12.588795 10.927083 10.633667 13.469323 13.232548 12.381671 11.172515 13.354987 9.907681 9.829296 9.738158 NA 9.203733 11.950138 11.0383163 8.2370359 9.3346192 9.6101347 6.7673251 10.8685156 7.6579143 9.8461808 11.9226553 6.0126916 0.2916036 4.3790525 6.2661212 10.7430607 10.0334803 7.3305109 8.8765544 11.5583786 6.5252123 11.4151767 9.7723822 10.8593104 9.1795742 10.0973358 10.1185377 10.8751450 8.9264030 NA 9.0747703 7.3710770 11.3702432 6.6752966 10.9274507 10.0452266 7.5653877 13.7925857 9.8092614 9.9794050 12.0668937 10.3090965 9.6197059 3.2457847 TCGA-AO-A0JI 56 0 NA 1528 breast stage iia t1c n1 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 1 2 5 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 10.740065 10.358388 11.994718 9.783791 8.865702 7.822917 9.596801 8.991233 10.258466 13.270346 10.496383 10.750884 1.768841 13.306221 6.033544 9.601731 7.138074 8.603136 8.570459 13.089829 3.686377 15.291967 2.058351 9.493036 11.132975 9.399816 NA 6.419094 9.932630 1.768841 7.309722 5.893537 NA 4.353803 10.423477 9.847436 10.368754 10.617811 9.337008 11.611366 2.299362 10.920280 14.120792 8.502963 10.362128 12.204395 11.240290 3.991236 6.535554 9.361298 10.553112 -1.401254 10.758787 3.728204 5.965237 1.406265 10.072621 11.514608 9.830137 10.348366 13.071607 8.703514 10.784101 11.042823 10.483849 10.742937 5.228272 11.349832 12.161158 NA 10.053729 9.580483 4.061292 4.380272 10.527804 9.533344 10.208556 10.790283 3.643314 4.686377 11.993914 10.663658 9.957017 8.545822 -0.78681000 0.00777760 0.00624810 0.00541390 0.01590800 0.03354900 0.00796650 0.00166420 -0.79494000 3.65690000 -0.08983100 0.70062000 -0.00788630 -0.00807840 -0.01064600 -0.01064600 -0.01064600 0.00000000 0.00000000 -0.79245000 0.00152550 -0.01046200 -0.03313200 -0.03313200 -0.03313200 -0.05118100 -0.05118100 -0.05118100 0.68141000 -0.81030000 -0.78681000 -0.78696000 0.00541390 -0.01945200 0.03354900 0.00796650 0.00796650 0.00166420 -0.79494000 -0.79494000 -0.07883500 0.01084200 -0.06477700 -0.01489800 -0.01489800 -0.01908600 -0.01908600 -0.00807840 -0.00636680 -0.01064600 -0.01064600 -0.01064600 -0.04615100 0.00000000 0.00000000 0.00000000 -0.78883000 0.00152550 -0.00656690 -0.81802000 -0.03313200 -0.03313200 0.00055459 -0.05118100 -0.05118100 0.68141000 -0.00595220 -0.03939400 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 -0.126 7.8034867 10.2323650 2.9208459 10.2717829 4.0655465 10.9026965 2.5989130 0.5989368 8.2906594 8.6676938 1.1838993 6.7432686 2.9208459 9.7365474 9.5392292 4.5531147 8.0167682 10.1254149 10.0423773 10.3088611 10.1081414 7.4967611 9.2163831 1.4062645 10.2145453 10.0277993 7.2571276 5.5414312 10.6939830 4.7688407 12.8305869 11.0270141 7.1458099 9.9570174 8.0786958 9.0665211 1.5989368 1.4062645 0.1838358 6.8657023 8.9443208 9.2463741 11.3058433 3.5989130 8.7753505 8.5012906 10.7087464 6.1611581 9.5406969 NA 9.6717183 0.5989368 3.2993619 9.6260131 5.4339543 4.8083696 8.9443208 8.2445741 11.6611305 NA 13.3978431 0.9208268 10.2259935 NA 7.0501273 4.0583511 8.1857556 9.3378524 14.2968335 5.5875990 9.4420517 13.3062209 9.2173012 10.8492141 13.0898292 12.7321382 9.0962985 10.6467212 12.7815428 11.6698752 9.3612977 7.9343060 0.1838358 6.9912327 12.1170770 11.1590097 6.9739556 7.5443594 9.7191537 9.1165852 10.6728965 5.5647013 8.1477376 10.4963831 7.7204495 -0.4010632 3.4568981 7.1294386 9.3412250 10.2218826 10.2377452 8.6212834 12.5821765 5.1687704 10.8400945 10.3687535 10.9278711 9.9885471 11.5449081 9.1244364 10.9679677 9.5840461 NA 8.8585294 6.0083076 10.7587870 3.5531147 10.9660574 10.0726214 6.1535054 12.7794465 9.2227971 10.4098889 11.9170348 9.3174486 9.6508044 0.5989368 TCGA-AO-A0JJ 54 0 NA 1887 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino 8 2 2 3 2 5 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 10.3086520 9.7588938 11.6631436 9.3346326 8.8949793 9.2821949 9.7732134 10.0607758 10.0519936 10.0273147 9.8679916 10.6463866 NA 12.0027127 3.6963945 9.6525320 7.2059525 8.4423522 9.7612903 13.1090853 1.5264695 13.7857747 7.3844540 9.3864424 10.2173438 7.9379840 NA 10.7026459 9.7001499 4.5488435 8.1039015 8.0042311 NA 5.8302528 9.6685799 10.4929783 9.8618631 11.6149298 8.5320976 10.9440616 3.6139323 10.6424918 14.8179673 7.3279550 9.3758779 11.3595605 11.0953790 4.4806723 1.6963945 9.3466518 12.1421025 -0.4735305 12.2930017 5.5264726 7.2746661 4.3844505 10.6560778 11.7636828 10.2967238 12.6056242 12.7026460 8.1594682 11.0307953 10.9237784 11.6455761 11.1804374 5.1558302 12.3359395 10.7938448 NA 10.1926968 8.7838606 2.5300707 6.7838613 10.3534185 9.7576940 10.2967238 9.9657843 3.1703257 9.9112566 13.3480475 12.7936984 9.5502271 9.6685799 0.00034819 0.49701000 0.49701000 0.00152550 0.00152550 0.00750000 0.00360760 -0.52148000 -0.52148000 0.01042400 0.01042400 0.00644710 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.47797000 -0.00235530 0.01042400 -0.02644100 -0.02644100 0.27833000 -0.03220600 -0.03220600 -0.01395300 -0.00027724 -0.02292700 0.00680440 -0.00443120 0.00152550 0.00750000 0.00750000 0.00360760 0.00360760 -0.54751000 -0.52148000 -0.14046000 0.00221930 0.00221930 0.01042400 0.00000000 0.00000000 0.00000000 0.00000000 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.00650500 -0.47797000 -0.00235530 -0.00733390 -0.53419000 -0.30710000 -0.03122300 -0.34744000 -0.03220600 -0.03220600 -0.02482300 0.01950300 -0.02068700 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.125 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.125 -0.059 9.9579704 12.6716885 4.4572134 10.1254558 4.3573338 10.7004622 2.2269092 1.1114320 8.5992754 8.9326778 NA 8.5550557 4.2269092 9.9495888 9.4029899 1.9859011 10.1980139 9.6165852 10.9776839 10.2637201 10.0053991 6.9776841 10.8447331 4.3844505 10.2208307 10.0563913 5.7838600 NA 10.7389692 2.7743970 13.5692437 12.1682988 8.2094675 10.1730316 8.9123352 9.1198640 3.9527343 1.8483976 -0.4735305 5.1703297 8.5885190 10.1806613 10.6486537 6.5708667 7.0263187 6.7838613 9.9427426 6.2611829 10.0544384 -0.4735305 12.4203431 3.2269092 4.1114320 9.7711578 6.1402245 7.8707685 9.8291118 8.8707688 9.9699344 NA 14.0339578 -0.4735305 10.0337719 NA 7.3370447 6.0102875 7.6685801 8.6336898 12.943450 4.848403 8.398378 12.002713 10.013308 10.537351 13.109085 11.701555 9.320889 10.708246 13.276499 9.818219 9.346652 8.943270 3.050031 7.247572 11.723382 10.6907513 6.6505937 8.7310440 8.7600925 8.9112781 10.0423205 8.0578542 8.2355567 9.8679916 7.1521814 1.6963945 8.8325344 7.4226232 11.0128051 10.1962437 7.7648776 8.2355567 13.0629022 8.2389998 10.9622967 9.8618631 10.7897420 9.8336736 10.5623029 9.9300174 10.7013985 9.1029573 -0.4735305 9.3224638 8.4453361 12.2930017 8.8049222 10.5243580 10.6560778 7.1151873 14.1698217 10.4627426 11.0774601 12.5771718 9.9981481 9.1365749 2.9187869 TCGA-AO-A0JL 59 0 NA 1683 breast stage iiia t2 n2a m0 female 2006 NA yes infiltrating ductal carcinoma 7 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 4.161568e-07 10.7041669 8.4498816 10.9437510 6.4192928 8.4624377 8.9157190 9.3985346 10.4574284 10.8373868 13.1542931 10.0565391 10.3952640 0.8749936 14.0756160 3.5379421 8.9120621 7.9482218 10.5544528 8.3151500 7.6298600 NA 10.3473252 8.3985346 10.6175629 11.5658438 5.0973664 1.6119278 8.3358517 11.2445701 3.4599299 7.7938361 6.8369050 NA 5.7162749 8.2586772 10.2073823 9.7667565 9.5915065 8.9904501 11.4180046 3.3774708 5.4397561 14.2755409 8.5975755 9.6017585 10.9800082 10.5473981 6.4896826 8.6343061 7.4649361 10.9024180 0.2899525 10.1534222 2.9904467 5.5188278 1.6119278 9.8455580 12.0925266 10.6409494 10.5690404 11.9109173 9.4611870 10.8834013 10.1886116 10.5254262 10.6376316 3.4599299 11.1768499 11.1268496 NA 9.9093132 10.5603056 4.4192962 3.7494377 9.1495449 9.2644248 9.5800290 10.6045935 1.2900115 8.2871897 12.3883714 12.1920084 10.2332576 10.6791038 1.5680000 1.7942000 2.4906000 -0.0146410 -0.0022168 0.3243100 0.5084600 0.7652300 -0.2929600 0.2212900 2.6422000 1.9343000 0.9721400 0.5593900 -0.2747600 -0.2747600 -0.2747600 0.6410300 -0.2840600 -0.5992600 -0.3240300 -0.3080300 0.5641800 3.6569000 -0.3102600 0.4283900 3.6104000 -0.2599700 0.5241500 -0.2916500 -0.0042929 -0.4593900 -0.0171160 0.0788710 0.0546600 -0.5943900 -1.2819000 0.7652300 -0.2929600 -0.2929600 0.0289030 0.5633000 0.2287000 0.6240600 0.6240600 -0.3051200 -0.2769100 -0.2941400 -0.2941400 -0.2747600 -0.2747600 -0.2833500 -0.2833500 -0.2706900 -0.2840600 -0.2840600 -0.5754600 -0.3226300 -0.3140900 0.2579300 0.1569600 -0.8353500 0.2714300 0.4283900 -0.2599700 0.3972200 -0.0283550 0.4651900 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.338 -0.338 0.319 -0.305 0.000 0.000 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.338 -0.338 0.319 -0.305 0.000 0.000 6.7738263 11.9560123 2.7494485 10.7262012 3.1208661 12.2151938 0.2899525 4.9904512 8.5915063 10.5188290 6.7329543 7.3932978 5.6823289 10.7973094 9.3614725 3.6823261 5.7978042 10.9410619 8.6519540 10.6158778 8.8710600 7.1292140 12.4295616 -0.7100475 9.0532227 9.8570156 3.3774708 NA 11.1615305 3.1969060 13.7421871 12.5050882 7.3774734 9.5903629 7.7818633 9.9686104 3.7494377 5.8291696 0.8749936 NA 9.4724045 11.1530350 5.9482224 4.9624333 10.2869357 9.6866150 10.0297909 6.9973692 10.7611774 6.3774726 12.9445344 1.8749543 4.5754152 9.8500565 6.8484314 3.9338653 7.9157193 7.6994010 6.3012383 6.6908892 14.2275680 1.2900115 10.6764116 1.2900115 9.4549172 6.0973643 8.3560993 7.8252857 9.9903633 9.5532795 8.7718097 14.0756160 9.4244365 11.4400748 7.6298600 9.5742559 8.5308015 10.0565391 12.7879868 10.8165095 7.4649361 8.7036382 0.8749936 6.9765103 11.9426312 10.4063542 5.7978042 8.3587883 8.9211873 6.4994632 10.0610705 5.1229005 4.7162776 10.0565391 5.4192928 0.2899525 7.8712110 8.7025377 10.3513814 10.3761464 8.1938920 10.0255662 6.2557953 3.9904467 12.2112357 9.7667565 10.1665272 10.3102957 11.2507363 11.5379378 9.9606665 6.5567972 1.6119278 8.9511649 5.4798352 10.1534222 9.2354540 10.4346685 9.8455580 7.6609158 14.5689315 9.6552391 10.1165588 10.7733222 11.5608895 9.0989745 5.5188278 TCGA-AO-A0JM 40 0 NA 2184 breast stage iib t2 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 2 NA hispanic or latino 6 3 1 2 2 4 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 9.8125584 9.9056131 11.3110953 8.4787850 9.6818547 9.1691937 9.2029187 10.3843535 9.8073058 14.1850161 10.5940928 10.9779128 -0.8764662 15.7323673 3.2109031 9.6252710 5.7233456 8.7762790 8.5808148 13.0804453 NA 13.8626872 0.7084080 10.2432116 10.4088361 6.5328250 2.1234344 9.2280327 12.0707056 NA 6.3618385 6.8445325 NA 4.1234344 9.4053640 10.0318266 9.3843536 10.5071382 9.7591520 9.9332020 3.2933558 10.1895231 15.0369545 7.8142005 9.8924452 10.2002496 10.5269786 3.6469921 3.0303184 9.4677298 10.6761031 NA 11.3181908 4.9307894 5.1895241 3.5828691 9.9186619 11.8436782 9.8436782 12.6058638 12.5296389 7.7381436 10.9328001 10.0501451 10.9716656 10.2933590 3.7672946 12.4883893 9.6042241 0.7084080 10.3286163 9.5746450 2.8238716 5.4088375 10.8453876 9.8368204 8.8547531 8.7252047 1.9307752 11.0560178 12.8935816 11.4557503 9.4385835 10.3594481 -0.00117720 0.93142000 0.93142000 0.39081000 0.40177000 0.41563000 0.43496000 0.36190000 -0.02021400 0.44206000 0.44206000 0.81893000 -0.01995000 -0.00283920 -0.00263220 0.72508000 -0.10171000 -0.02840900 0.52783000 -0.45104000 0.83019000 0.30202000 -0.91032000 3.65690000 3.21660000 -0.46206000 -0.45693000 -0.03463100 0.42318000 -0.46982000 -0.00117720 0.00000000 -0.45136000 -0.46109000 0.40644000 0.23473000 0.23473000 0.74651000 -0.02021400 -0.01986300 -0.00995650 -0.46291000 -0.48113000 -0.00263220 -0.00263220 -0.00868030 0.41429000 -0.00283920 0.01462400 -0.01450300 0.72508000 -0.10171000 -0.11384000 -0.02490000 -0.01064600 0.00015017 -0.45104000 0.79675000 0.30042000 0.00889200 -0.46408000 -0.46664000 0.00180300 -0.46238000 -0.03463100 0.43361000 0.40003000 -0.01601700 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.434 0.434 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.409 0.278 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.434 0.434 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.409 0.278 7.9372149 14.2809388 6.0776297 9.7672901 NA 11.4431060 1.4453559 NA 8.1541011 7.1787166 NA 8.3132586 0.1234013 10.7807524 8.4699478 2.1234344 9.1596075 9.5879796 10.7116801 10.7098046 9.1579302 7.1623531 10.9539491 0.7084080 8.1346614 10.6227816 2.5828691 NA 12.1688523 2.1234344 12.7881034 12.2839357 7.3280053 9.4809858 10.1057146 9.1192010 3.8783232 1.7084080 NA 2.2933705 8.3401799 10.2933590 9.8699482 3.5828691 6.4363168 7.4180550 9.8649010 4.4088341 10.2851957 NA 10.9064322 1.7084080 2.5828691 9.2110426 5.8639558 2.1234344 8.6970812 8.1948962 9.6420871 NA 13.5564977 5.6152868 10.6861534 NA 8.6132819 3.5828691 7.5200387 7.8479481 13.1631241 6.3902206 8.9243339 15.7323673 10.1114085 10.9464030 13.0804453 12.2265578 8.9763224 10.3492438 13.4963670 10.0863300 9.4677298 9.9642119 -0.8764662 8.7046344 11.1972408 11.480436 6.418055 8.790528 8.851354 8.218831 10.733601 5.599166 9.140242 10.594093 6.156858 1.123401 6.313259 7.515451 10.545499 10.272546 8.027316 9.373732 10.997262 4.515750 10.200570 9.384354 10.999183 10.688536 9.582866 9.465509 10.715424 9.255291 2.708386 9.083552 4.904792 11.318191 7.788770 10.494121 9.918662 7.432274 13.533819 10.183454 9.765486 12.249332 10.268729 8.891618 1.123401 TCGA-AO-A124 38 0 NA 3506 breast stage iia t2 n0 (i-) m0 female 2002 NA no other specify 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.467973e-06 7.282743e-07 10.4749570 10.0771330 11.7538182 9.6229494 8.0613701 8.4148053 8.4280574 10.7901945 12.0882743 12.9869013 11.0205953 10.8333935 1.5175781 12.9374196 2.7806041 11.1970448 5.5793401 9.9467621 10.0839994 5.8176872 NA 9.6839789 7.5943806 9.5613028 11.3997492 6.4435636 2.3655526 9.1182211 11.6554524 0.1955996 8.5062493 9.2005593 0.1955996 3.6550656 9.6182271 10.8220301 9.4038710 11.1747045 10.8766554 11.5874172 1.7806041 8.8830122 15.0722735 8.1107991 9.2956418 11.0477760 11.7504653 3.8960781 NA 10.6586500 11.5951816 -1.8044004 8.0158153 6.0158164 8.6344285 5.5965148 6.9638209 12.4921944 10.7413252 10.6872392 12.5900323 5.7113352 11.7585945 11.4812324 11.5075268 10.3885458 5.1025280 12.8051617 9.1657424 1.6550770 10.3129551 9.6571160 3.3675668 3.3249258 8.0949934 10.5641431 9.9197241 9.1388841 -1.8044004 8.9712469 12.7377616 11.6964785 10.6042318 9.7191985 -0.1480500 0.9828700 3.6569000 -0.1294000 2.1557000 -0.1705000 -0.1101100 1.9594000 3.6569000 -0.1355200 -0.1355200 1.2076000 1.1619000 0.4696400 -0.0030475 -0.1069700 -0.1234300 1.2592000 -0.1502900 0.4944100 -0.1325800 0.6386500 -0.1074900 0.9546800 1.3645000 0.4236800 0.6175200 0.4486700 -0.0789430 -0.7558200 -0.1480500 -0.0906260 -0.1294000 -0.7828600 0.3825400 0.4847500 -0.1565600 1.0466000 1.5132000 -0.1537500 0.9616500 0.5500000 -0.7941100 1.1279000 0.5523000 0.5909800 -0.0847930 -0.7645800 -0.0344950 0.7058800 -0.1069700 -0.7027100 -0.7473400 1.0380000 -0.1396200 -0.1197500 -0.1484900 -0.1455400 -0.7530500 -0.0013858 -0.1074900 0.5068900 -0.7390600 -0.0904930 -0.1065700 0.4381700 -0.1449000 -0.7602900 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.399 0.507 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.136 -0.136 0.000 0.000 -0.125 -0.441 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.399 0.507 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.136 -0.136 0.000 0.000 -0.125 -0.441 6.0158164 12.5731861 -1.8044004 8.7444585 2.7806041 13.3194751 0.1955996 4.1729195 8.7024401 10.3811315 8.3542463 9.8068228 5.9965356 10.5313061 9.5039756 5.3249186 5.3755469 9.7918264 6.2777858 9.5657792 7.8288860 7.9621655 10.6859861 1.1956626 9.0489462 9.9961321 1.5175781 NA 10.0855208 2.8394961 13.0891278 11.7375802 7.2318106 10.4939856 10.7997265 9.4804606 5.9167370 1.0030265 NA 6.0843790 9.3693138 8.5739315 7.4833490 7.3879294 10.0683115 7.4316505 10.0332645 5.9505244 10.6344285 2.7806041 12.8731911 1.8960781 2.5175529 9.8524324 5.5376222 5.5354869 9.3178176 6.5619584 5.1956350 6.5750143 13.6650877 2.7192053 10.1603385 NA 8.8094260 3.7502206 8.4694322 8.4014299 8.385461 8.907304 7.883887 12.937420 10.572847 12.419337 5.817687 10.511918 9.187159 11.810691 12.941783 11.376789 10.658650 8.257683 2.655077 9.035628 10.331346 11.126374 6.957188 8.577180 9.189283 10.426029 10.152684 4.655066 3.780604 11.020595 8.428057 7.269778 9.121933 9.589622 13.686895 9.470597 3.305839 8.686488 10.508520 5.149832 9.171950 9.403871 9.797407 9.601842 11.551263 11.578261 10.757163 8.528792 5.544365 8.307842 5.471760 8.015815 7.187158 10.047561 6.963821 8.259032 14.258378 9.446527 10.483349 13.822743 11.352194 9.133746 -1.804400 TCGA-AO-A125 72 0 NA 3019 breast stage iia t2 n0 (i-) m0 female 2002 NA no other specify 0 black or african american not hispanic or latino 5 5 2 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.774378e-07 10.5624933 8.9155651 11.2767527 7.7325785 9.1849923 9.7170936 10.6766369 8.3696418 9.8311729 12.4578814 10.4842301 9.8864418 2.9200836 12.6776373 3.3530409 7.9947573 7.8002761 8.4607897 9.8789233 13.3745855 -0.4018254 14.2953644 6.9775307 10.7794352 10.7251795 5.8742781 NA 7.0452354 9.1859300 NA 7.3696418 5.4183316 NA 1.9200646 9.4800312 9.6615476 10.9327051 11.7726101 9.9357744 11.3723218 11.5147784 12.3634386 13.7793436 10.1098557 10.1513018 11.2213481 10.8514091 3.2420079 3.1831212 7.7605437 11.0254653 NA 11.1469744 1.9200646 2.1831053 2.9200836 9.9807765 12.4683245 10.9197987 13.8440765 13.2141269 8.3663366 10.5797197 10.5925201 10.8786333 11.0862437 3.7274304 11.6961846 11.0887527 0.5981746 9.9818568 8.0032941 5.0941685 3.3530409 10.8534762 10.0834787 10.2142418 8.8707824 NA 10.4646587 14.1102757 10.8620085 10.3650954 9.9324258 1.22500000 1.78690000 1.78690000 -0.01194900 -0.01194900 -0.00981300 -0.01233600 -0.00733390 -0.02035000 -0.00346270 -0.00346270 -0.01466300 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00899060 0.00638710 0.01307400 0.00319100 0.00319100 0.00319100 0.00983100 0.00983100 -0.00340930 0.01978300 0.02244400 -0.01037000 -0.01271300 -0.01194900 0.00013863 -0.02268500 -0.01233600 -0.01233600 -0.00733390 -0.02035000 -0.02035000 0.94262000 0.94262000 -0.00346270 0.00108240 0.00108240 0.00388540 0.00388540 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00470790 -0.00899060 0.00180300 0.01307400 -1.04080000 0.00319100 0.00319100 0.01684500 -0.00111230 -0.00884420 0.01978300 0.00930980 0.03059100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 0.000 5.8173214 9.9490916 6.7780614 8.9655673 0.3029916 10.8611282 1.4055023 NA 8.8088239 7.3827874 NA 5.3123965 1.4055023 9.9952923 9.7805468 3.9200836 9.8431109 9.2820243 10.1584854 11.4133356 9.2519380 8.4530208 10.9327051 0.4581720 9.0545069 9.6232920 4.0900065 NA 10.4298556 4.2420079 13.4978398 11.7141715 6.6749676 9.6191324 8.2793910 9.4715966 4.1831133 2.7680784 0.9200646 4.2420079 8.6149608 9.7183904 10.0027619 -1.4020160 9.7807145 7.4807959 10.1646822 5.4310412 9.2365883 0.5981746 11.2883688 -0.4018254 5.5288901 11.1334983 7.0216885 -1.4020160 7.3020558 4.7066742 3.6856150 2.6856262 14.3017857 -0.4018254 9.5251898 -0.4018254 9.9829363 5.1527432 8.2563639 8.5406670 13.444725 4.326070 9.129534 12.677637 10.697500 11.400669 13.374586 12.388806 9.057584 10.101481 13.720333 8.041096 7.760544 9.549437 1.183137 7.790446 10.970746 10.4634991 7.1019778 9.2688000 8.8508179 7.8578958 10.0360241 3.7680784 5.2420079 10.4842301 6.3925682 -0.4018254 8.3158289 6.5494951 8.7364243 10.6298537 8.6301983 8.2898962 10.6726285 NA 14.3472507 10.9327051 10.7325788 10.7876682 11.4465798 8.7351437 10.4506820 7.6615472 -1.4020160 9.1744668 -0.4018254 11.1469744 1.7680784 10.8608052 9.9807765 7.4215196 13.8573073 10.0275592 10.0839819 12.4437405 10.3136855 10.6988148 2.5050525 TCGA-AO-A126 39 0 NA 3307 breast stage iia t2 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 asian not hispanic or latino 3 2 2 3 3 5 1 1 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 9.6439985 8.8237751 10.6397218 6.5043582 9.1676532 8.5338495 10.1602078 9.6742832 11.1426840 13.1082748 11.2040740 10.0893207 0.9808296 12.6707942 3.2438366 9.6311299 7.0767205 8.6375787 11.1975421 12.4256041 NA 14.9151322 5.6361490 10.2083545 10.3175260 6.4980721 -0.3411716 11.9713584 9.9268252 3.4137565 8.7209142 6.5353858 NA 3.1824381 8.1607054 10.0131176 8.9751498 10.9677760 8.8948823 10.1295271 8.0053820 10.6293336 14.8017131 6.1046281 10.8554703 10.3850863 10.6325655 4.9626508 5.0511850 7.1902494 10.0629453 0.2437909 10.7657582 8.1366267 5.5043598 3.6130601 9.0934965 12.1022003 10.6707942 11.5966098 12.2513252 8.5369190 10.8089327 10.1799779 10.6054090 10.4394080 1.9807931 12.1946295 12.7070144 1.4662356 10.5650071 8.7276465 3.7463343 4.2735756 10.4307702 9.4336553 10.0940175 9.3540964 5.2587827 6.7829890 12.9324453 13.7322148 10.2936792 10.6425743 0.00000000 0.00000000 0.00346870 0.00708260 0.00138680 -0.00097017 0.00541390 0.00138680 -0.00013862 -0.66467000 1.64290000 -0.01436600 0.00750000 0.00750000 0.60973000 1.71900000 1.69810000 0.00166420 -0.00443890 -0.00650500 0.00944910 -0.00124730 0.00499690 0.02567100 0.01474900 -0.00166290 -0.00166290 0.02370600 0.02006300 0.02763800 0.00000000 -0.02268100 -0.66716000 -0.00097017 -0.00097017 0.00541390 0.00541390 -0.00083160 -0.67884000 -0.01106000 0.00000000 0.00666530 -0.68479000 0.00666530 0.00666530 0.00666530 0.00666530 0.00750000 0.00750000 0.60973000 0.58524000 -0.66328000 0.00138680 0.00166420 0.01656500 0.01782400 -0.67481000 0.00944910 -0.00691950 -0.65482000 -0.65659000 0.02567100 0.00360760 -0.00166290 0.02370600 0.02006300 0.00610900 0.01880300 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 9.0230027 12.8665689 6.9396392 9.9774110 2.5657678 11.4542991 1.2438518 NA 8.9008514 9.2891352 -0.3411716 7.1626934 1.4662356 10.0147698 9.1696324 3.7463343 8.7868626 8.6616833 10.0420324 12.0731570 8.4002510 6.6246522 11.8944337 2.9067944 6.4402280 10.2818351 3.1824381 NA 11.0690545 3.1824381 13.3364227 12.4104122 8.6950417 8.9592207 7.9897850 9.9425353 3.9067944 1.6588741 NA 4.4137565 9.1882988 11.0626791 10.2763357 3.7463343 8.4868141 8.4516583 9.8616042 4.7032613 9.6268149 NA 11.4998427 3.1182933 4.7032613 9.9889952 6.1092540 2.1182933 9.0554731 8.1305433 10.2258736 -1.3411716 14.8826059 1.2438518 10.3130566 NA 7.3935775 6.3799675 7.8060733 9.2744979 14.677342 6.174568 8.498072 12.670794 10.474652 10.396960 12.425604 11.445342 10.100256 9.801613 12.540747 9.405383 7.190249 9.669396 1.466236 7.433656 10.368383 11.100775 6.692290 9.103883 8.943114 7.331293 9.781987 5.756901 5.577731 11.204074 8.811153 3.980793 9.935574 6.961095 10.808933 10.447994 8.512178 9.582196 7.142684 4.213456 11.853200 8.975150 11.007043 11.007596 11.088536 9.178505 10.318864 6.601383 4.658868 8.386295 4.051189 10.765758 8.779106 11.053599 9.093497 7.012015 15.276034 10.164680 9.781049 11.990065 10.520731 9.573253 2.565768 TCGA-AO-A128 61 0 NA 3248 breast stage iia t2 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 2 4 2 3 2 5 3 3 NA NA 0 0 0 0 0 7 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 7 0 0 0 0 0 0 0 0 0 7 4 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 5 7 0 0 0 0 0 0 0 0 2.039168e-05 8.288455e-06 10.1534782 9.6981228 11.9582281 9.8126933 8.2163676 9.4950033 9.2051352 10.0891603 9.1964861 12.8144879 10.3641851 10.6114403 3.1627257 12.3712964 2.0252415 11.4021472 5.5612803 8.8564277 10.9537937 9.4626313 NA 7.7889917 9.3290067 9.7636786 10.6853407 6.3471536 -0.2967221 11.9065439 10.1165732 2.2882700 8.1803816 7.4648488 NA 4.6418986 10.6455680 9.8782235 9.3192341 10.3798427 9.6843894 12.4156099 1.4402612 7.0252260 14.7978842 8.4730364 9.5731488 11.2664942 10.7355733 7.4129559 10.4813750 9.3763125 11.5319633 NA 10.0398045 8.2566074 9.3973655 6.1126897 11.4123817 11.7478058 9.9994493 12.7203963 13.4060478 6.1897969 10.6834374 10.2677935 10.9166047 11.4832907 5.5277272 12.0505501 4.8048383 NA 10.8375102 9.7454132 3.0757893 6.8931219 9.7358029 10.6731640 10.2350042 10.6176830 1.7032779 6.4626315 13.0625899 11.8937399 10.3137076 9.3892147 0.2449800 0.7254600 0.7290500 0.2299300 0.4720400 -0.0142280 0.1923800 -0.0217840 -0.0157480 0.7262200 0.7262200 0.7037100 0.2379800 0.1611800 -0.0156040 -0.0156040 -0.0156040 -0.0124330 -0.0124330 -0.0040162 -0.0077482 -0.0849260 -0.0154660 -0.0154660 -0.0154660 0.0827650 0.0827650 0.4610900 0.2404400 0.2512100 0.2449800 0.0042556 0.2299300 -0.0142280 -0.0142280 0.1923800 -0.0164290 -0.0199220 -0.0157480 -0.0156040 0.4947600 0.2270000 -0.0212350 0.2358100 0.2356600 0.2356600 0.2471600 0.1611800 0.2494900 -0.0156040 -0.0156040 -0.0156040 -0.0156040 -0.0124330 -0.0136770 -0.0136770 -0.0040162 -0.0077482 -0.0849260 -0.0124380 -0.0154660 -0.0154660 -0.0066432 0.2263800 0.4610900 0.2457500 0.2032000 -0.0136770 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.240 0.240 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 0.133 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.240 0.240 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 0.133 10.2304491 12.5202149 0.4403144 8.3106282 5.8256941 10.3830711 4.3081570 0.4403144 9.4464494 7.9979184 NA 6.7888853 NA 10.6526382 9.6026549 1.4402612 9.6251388 9.6066776 8.4901120 8.1978202 9.1693608 7.9111259 10.1620462 4.9127504 8.7302823 10.1403564 4.2476162 -1.8815074 11.0038411 2.2882700 12.4305093 13.1283826 7.0870024 9.7603871 11.5553071 9.7312040 6.9353195 3.4037313 0.4403144 1.1183597 8.8239678 9.4186879 6.6995364 2.7033001 9.2956117 8.0446313 9.7454132 3.2882552 9.9990669 -0.8817732 9.1998188 5.7693883 4.2476162 9.9932437 7.6765072 6.9763167 11.2304490 11.1417432 8.5519209 3.1183431 13.0977606 2.4402612 11.0059368 NA 8.5309053 2.0252415 8.0696200 7.9385146 11.836531 7.886520 8.176327 12.371296 10.265222 11.037012 9.462631 5.703297 8.973204 11.033468 13.554429 10.044631 9.376313 8.415252 2.762200 7.401424 12.125538 10.759710 1.577779 9.058649 7.688191 9.367449 10.445941 9.457072 5.866527 10.364185 7.583902 8.422116 3.544597 8.637932 12.802098 10.897850 8.535861 8.363888 10.792748 8.912751 10.598828 9.319234 10.727514 9.539348 9.686767 10.551921 11.091495 9.091315 4.288263 10.126750 8.381604 10.039804 4.327788 11.730422 11.412382 8.378078 13.304833 10.672445 10.498796 13.152619 10.932517 9.553485 4.247616 TCGA-AO-A129 29 0 NA 3286 breast stage iib t2 n1a m0 female 2002 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.150143e-06 7.282743e-07 9.8267202 8.4958706 10.9624383 7.9911828 9.4376196 9.2932718 7.9124499 10.5485170 12.0785166 12.4393255 10.3152982 10.1758699 1.6270465 11.5397502 1.7969715 10.8672430 5.9933709 8.5768747 6.8938342 5.5812428 0.6270465 11.4640844 8.0782592 10.7005870 10.7878648 6.8891425 0.6270465 11.8144000 10.6880815 1.4344014 8.7065326 7.3344074 -1.3729535 5.9668988 9.0321893 10.0736143 9.2518433 9.3727223 8.9136057 10.6221084 3.2709026 8.2269607 15.4158682 7.3367868 10.1973780 10.6043279 9.6666524 3.2709026 NA 9.1729777 10.2073065 NA 9.8193407 6.2343787 7.2082480 6.2044772 8.8316192 11.9395055 11.1444713 10.7527842 12.6429856 7.3100429 10.7303357 10.1269336 10.5150301 10.4950987 2.7145093 11.9910457 7.4756710 3.6714406 10.6768964 9.1338514 3.9856553 4.8364998 12.2029416 10.2564045 11.0616761 9.4559777 0.9489746 7.4756710 12.4322879 11.7691550 9.4520066 10.2171671 0.0817550 1.0979000 1.4562000 -0.0314960 0.5150700 -0.4165900 -0.2488500 0.3505500 0.1975600 -0.4781800 -0.4781800 1.2217000 2.4003000 -0.4689700 0.3544700 0.0139110 0.0139110 0.9308100 -0.1212100 0.2240700 -0.4506100 0.2978700 -0.2215800 -0.2768200 -0.2884500 0.0502500 0.1229900 -0.2544300 0.7583400 -0.3848100 0.0817550 0.0070826 -0.4438300 -0.2747600 -0.4687200 -0.4430700 -0.4430700 0.3505500 0.2113100 -0.0486480 0.0144700 0.3805400 -0.4781800 0.6597700 0.0670880 0.0670880 -0.4666300 -0.4553300 0.2099300 0.0891270 0.0139110 -0.1468200 -0.4941300 0.3779200 -0.4689700 -0.4689700 -0.4369400 -0.4621500 -0.4863000 -0.1456700 -0.2215800 -0.2884500 -0.0153290 -0.4796500 -0.2403400 0.0301690 0.0511030 0.0680910 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.139 -0.139 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.139 -0.139 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 0.000 9.421464 13.311577 3.533937 9.873195 5.922495 13.182056 5.341292 5.693138 9.056455 9.838936 6.368515 8.886544 4.327486 10.899678 9.769155 2.327486 8.799475 9.697169 8.027928 9.821805 9.268991 7.126893 11.526594 1.434401 9.003173 10.803844 2.874974 NA 10.146193 3.434401 13.816486 12.837415 7.914760 9.470969 10.072063 10.384855 4.693136 2.714509 NA 8.842581 8.785657 10.361758 6.575415 3.327486 9.362731 7.459938 9.964670 5.447225 9.375241 6.776795 12.685040 2.434401 6.044901 9.961623 7.015711 8.094654 8.697169 8.110864 9.571028 2.212009 13.809597 -1.372954 10.978263 -1.372954 8.935387 4.212009 7.674172 6.851049 11.820254 8.261859 8.084429 11.539750 10.561844 12.079418 5.581243 10.485806 8.972453 11.124650 13.092359 11.190244 9.172978 9.295933 3.714509 7.693137 11.313111 10.569929 4.533937 8.975776 8.440829 6.521866 9.315386 9.474888 6.166207 10.315298 10.303887 NA 9.261859 9.303525 11.500300 10.481916 7.727710 9.841367 7.799475 8.116896 10.899331 9.251843 10.102275 10.170080 10.673831 10.052264 10.393163 8.270904 NA 9.837427 9.294159 9.819341 6.545911 10.819957 8.831619 8.082375 14.771567 10.393577 10.332248 12.353798 11.266615 8.820573 2.796971 TCGA-AO-A12A 47 0 NA 2755 breast stage iia t2 n0 (i+) m0 female 2003 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 3 NA 3 1 3 4 2 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 1.387189e-07 11.3663521 10.0591706 11.6792280 8.8569368 8.2830782 9.1671399 10.0870430 9.4785844 10.3596244 13.3520653 10.8468163 10.5958120 3.2034988 12.5755534 3.7340050 9.8143827 7.2719747 8.7951208 10.8293386 12.7414319 6.5200702 14.2295312 6.4429601 9.8831519 10.5577848 4.9404581 -0.5513104 9.7089385 9.7682791 2.6965280 7.7973353 7.9202820 0.7705331 4.4028040 9.9755952 10.3400111 10.3711914 11.4797913 9.9979104 11.2219523 6.2299666 12.1316016 14.7592198 8.2229330 9.4401289 11.4554591 11.2679878 5.2299685 1.9080443 9.0660744 12.1548872 -1.5513104 11.4403060 4.4258889 6.4258873 4.5146967 11.0151368 12.0143042 10.9243404 12.8023052 12.7070258 7.4230218 11.3344940 10.8184770 11.1280871 11.0328650 4.5360716 11.5694929 10.8627637 -0.5513104 10.6325525 8.8290681 4.2575085 5.0335684 11.4654153 10.4974344 10.1236820 9.8690936 4.4709728 9.6941597 13.4552837 11.9973085 9.9711886 9.6689853 -0.21243000 0.99717000 0.99717000 0.00000000 0.00000000 -0.18534000 0.29676000 0.06265100 0.06265100 0.00013863 0.00013863 -0.00747200 0.25652000 0.25652000 0.30076000 0.30521000 0.30521000 -0.00166290 -0.00166290 0.27395000 -0.00567570 0.07067300 -0.02288100 -0.02288100 -0.02288100 0.21908000 0.22742000 0.23055000 0.28612000 -0.21243000 -0.21243000 -0.17988000 0.00000000 -0.20736000 -0.23994000 0.29676000 0.29676000 0.06265100 0.06265100 0.06265100 -0.00221680 -0.00221680 0.00013863 -0.02151000 -0.02151000 -0.02151000 -0.02151000 0.25652000 0.25652000 0.30076000 0.30076000 0.31803000 0.30649000 -0.00166290 -0.00932870 -0.00932870 0.27395000 -0.00567570 0.07067300 -0.36839000 -0.02288100 -0.02288100 0.31033000 0.21908000 0.22742000 0.27148000 -0.03558500 -0.35920000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.227 0.227 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.227 0.227 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1671399 12.7290878 7.7523880 10.1507797 3.7705331 11.0250914 1.4485838 0.7705331 8.2543507 9.3042541 0.4485838 8.1263617 3.0924612 10.0118032 9.7929030 2.3554956 8.6714020 9.4778942 10.3255076 9.4577359 9.5264975 7.7316951 11.4512463 3.5360653 9.7772819 9.9993539 6.6285155 NA 10.4205098 4.3554956 13.3047407 11.8470835 8.1900740 10.4709748 8.8925865 9.0861376 4.3793437 2.2559539 0.7705331 4.9080395 8.2381405 9.3991630 10.2527380 5.5146967 7.9188388 6.6726092 10.2184449 7.1455745 9.3494739 -0.5513104 11.1007798 2.9721780 5.0924612 9.7836624 5.9248268 4.3793437 8.8537484 7.9364471 6.4820302 NA 14.0626554 1.4485838 10.2937050 -1.5513104 9.1359827 5.6185323 8.2987939 9.0194114 13.5493523 5.0184606 8.5778899 12.5755534 10.7617735 11.2186514 12.7414319 11.8940099 9.0843253 10.6269606 13.4688491 10.9281347 9.0660744 8.4187128 0.4485838 7.4057091 11.2227764 11.233855 6.823646 9.375644 9.550583 8.286235 10.817564 6.810551 8.890514 10.846816 5.724732 2.255954 7.328190 6.787700 11.921932 10.577568 8.729378 8.778403 11.982058 5.924340 12.211519 10.371191 10.582391 9.896723 11.265391 10.776160 10.629449 9.266390 1.033582 9.379189 6.262388 11.440306 7.041064 11.094000 11.015137 6.924341 14.114332 10.055475 10.546639 12.931289 10.782321 9.692971 2.618521 TCGA-AO-A12B 63 0 NA 2989 breast stage iia t2 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white hispanic or latino 5 5 2 3 3 5 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 9.7917353 9.3042420 11.1700881 8.0598084 9.2531679 8.8230551 10.7413059 9.4938683 9.7183142 13.0878985 11.0468900 10.8474318 0.7583032 11.7260790 3.2818763 7.6860901 7.4622160 7.2380923 10.3409248 13.7223824 3.3432799 13.8693257 -0.2416115 10.4598051 11.5624434 5.4862317 0.3432372 10.1029911 9.6394263 -1.2416115 7.7917353 6.5975163 NA 4.5396737 9.1048260 9.2749973 9.7889794 8.7370228 10.1414766 10.7586645 5.4021696 11.6875707 14.3456797 8.3437445 9.7681410 11.7535495 10.6378956 1.5656459 NA 7.8510694 9.2033272 NA 10.5908068 2.7583032 3.1506247 2.0802483 9.9823140 11.4046460 10.7519584 11.5281502 12.2285899 4.7583138 10.5943627 9.9786907 10.4311796 10.6006627 2.9282377 11.2688293 11.0920268 -0.2416115 9.5198636 8.5065052 2.3432657 4.5656703 10.2896937 10.1452525 10.3633288 9.3498348 -1.2416115 9.0204072 10.1772191 10.4280832 9.4448128 8.9943266 -0.0213800 0.9513100 0.9532300 -0.0223400 -0.0239840 -0.0313670 0.9491400 0.4875500 0.4758000 0.4699000 0.4699000 0.4699000 -0.0191850 -0.0191850 0.4728800 0.4728800 0.4728800 -0.0318840 -0.0269950 0.4706600 -0.0250800 -0.0158710 0.4500200 0.4500200 0.4500200 0.4498500 0.4498500 0.4498500 0.4843900 -0.0213800 -0.0213800 -0.0084463 -0.0223400 -0.0313670 -0.0313670 0.9068500 0.9322200 0.4875500 0.4758000 0.4758000 0.4677500 0.4677500 0.4856000 0.0000000 0.0000000 -0.0045774 -0.0045774 -0.0191850 -0.0191850 0.4728800 0.4728800 0.4728800 0.4728800 -0.0269950 -0.0306840 -0.0306840 0.4706600 -0.0250800 -0.0106540 -0.6083600 0.4500200 0.4500200 -0.0113430 0.4498500 0.4498500 0.4843900 0.4795800 0.4876700 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 0.225 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 0.225 6.4448128 10.8247379 4.3432728 10.2646199 2.8457710 10.3124215 -0.2416115 NA 9.0086107 5.6652023 NA 5.4021696 NA 10.2596519 9.0145210 0.3432372 4.8027051 8.6470554 11.3338516 10.6405733 10.0954101 6.5132002 11.1360651 1.3432941 9.5157024 10.1075936 7.4165239 NA 10.7480616 1.9282377 14.1451179 12.6390438 6.8190077 11.0595227 9.6905271 9.3739420 -1.2416115 3.2818763 NA 4.7125077 10.4587520 11.7882897 11.2197918 2.9282377 7.8355818 6.6949498 10.5567841 4.7583138 10.0162893 NA 13.2215174 0.7583032 9.2340457 9.7450361 6.6617724 2.5656703 8.0483310 7.1929408 4.9282377 NA 14.0682860 -1.2416115 10.2867665 NA 9.8061180 5.3730217 6.9919322 9.5680804 13.671445 3.343280 8.384021 11.726079 10.084180 10.944117 13.722382 11.531658 9.431621 10.010978 12.588431 10.170353 7.851069 9.012160 1.080248 8.285789 11.007129 10.225918 7.671201 7.840461 8.744154 8.986578 9.633893 5.665202 8.524841 11.046890 5.689050 -1.241612 7.835128 5.793168 9.219792 10.239607 9.062983 10.170882 9.788979 2.845771 10.712578 9.788979 10.058665 10.159725 11.993579 8.784836 10.064374 8.742731 NA 9.246584 4.115866 10.590807 7.982314 11.763410 9.982314 6.635197 13.655543 10.796888 11.377845 12.963724 9.866183 9.296501 2.217758 TCGA-AO-A12C 42 0 NA 1994 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 NA 1 3 2 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.0078750 10.1028686 11.4830833 9.9640354 8.6445442 9.3640558 10.5375705 9.7323650 9.5997221 13.1125968 12.0430805 10.3645178 1.0777215 14.3771661 4.7330831 9.4014594 7.6106691 8.4440512 9.8991842 13.1420003 0.7558276 13.9700442 4.4562410 8.8406093 10.9689052 10.3089502 -0.2441724 10.4631601 8.9106190 4.1481206 8.0481228 7.5039934 0.3407332 5.0956502 10.3194739 10.0532904 9.3218551 12.0486977 9.9695127 11.7835342 1.0777215 11.6359584 14.9629869 8.4137269 10.1193773 11.2088143 11.3239946 4.8218888 5.5502173 9.6161121 11.4957925 -1.2443433 11.4832960 5.8850838 5.4422999 4.5631581 10.5127742 12.4031470 10.4981104 12.6125183 13.1929678 7.9846195 10.5094356 10.3819207 11.2421332 11.1045291 4.6626897 12.5180792 11.6951965 -0.2441724 10.2101002 9.0214162 3.5154854 5.1987456 10.7005131 10.7764338 10.4734774 10.0486977 2.0777215 8.3332296 12.6917027 11.8525161 9.9785959 9.4014594 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6924391 14.0685067 9.4484164 10.1497277 3.2623279 11.0293052 1.9257336 -1.2443433 8.5006348 8.1862534 0.3407332 9.7186969 2.5631581 10.0055071 9.3787680 0.7558276 8.5206725 10.0452435 8.1966700 10.0584399 9.8007893 9.4050572 11.1789169 2.9257336 8.7947200 9.5231579 4.0037282 NA 11.5749822 3.0777215 12.9676893 11.7387946 8.6338518 10.1253984 8.3256567 9.3501255 3.7099964 0.3407332 1.0777215 -0.2441724 8.3445156 9.1395053 10.3270796 5.0225853 6.2403410 6.1045296 11.8800839 6.4972675 9.8805684 NA 10.4295517 3.7099964 4.6626897 9.8384224 6.7713270 4.8001958 9.1545447 8.0572970 7.8137927 -1.2443433 14.4242982 NA 10.2847434 NA 8.6122264 5.9055483 8.2616126 8.6581761 13.952019 4.483719 8.702707 14.377166 10.871170 10.345452 13.142000 13.206497 9.043652 11.034776 13.371603 11.345920 9.616112 8.796091 NA 8.355714 11.854491 11.342172 7.533878 9.486271 9.482019 6.421137 10.659886 6.392426 8.612226 12.043080 6.476900 5.650618 7.287182 5.298988 12.132062 10.218303 8.493893 9.308470 12.479675 5.955473 12.424490 9.321855 10.841605 9.940056 11.416911 10.263100 10.722306 9.108948 NA 8.720199 6.190429 11.483296 8.764230 10.978970 10.512774 7.404446 14.611083 9.743065 9.706357 12.138830 10.913148 9.964035 1.563158 TCGA-AO-A12D 43 0 NA 1948 breast stage iia t1c n1a m0 female 2005 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 4 NA 1 6 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 10.2161091 10.0442155 11.9340639 9.7860322 8.0062913 9.2794028 10.5525368 10.5075222 11.6429025 13.8458367 9.4053987 10.8043710 4.1128252 17.6873361 4.6708177 9.1027678 4.6708177 8.5409490 7.0514210 12.6152112 NA 10.9714931 6.3691611 9.3618030 11.5167802 7.8285929 2.1128336 10.5217408 10.2921776 1.5278711 10.3544073 8.2580459 NA 6.2648254 9.8963653 10.1259114 9.9694198 11.0313534 9.9158761 11.0980308 12.3382966 9.9173109 15.2852662 7.8450001 9.7201517 11.0964484 10.7828874 6.4974846 3.8008792 9.0721795 12.8402692 -1.0570914 10.8426309 6.7566777 7.7340592 4.6708177 10.5174899 11.5334834 9.5740735 12.3862285 12.3171208 7.0566388 10.9425441 9.8072063 11.2622862 11.2137756 4.4664575 12.1049729 9.1178220 0.5278711 9.9180278 9.6197351 3.9674822 5.9981797 8.9173109 10.9180279 9.8669665 10.1620649 4.7757880 11.0954981 13.5562254 12.3709948 10.1265318 9.5993211 -0.0065050 0.3477300 0.3651000 0.2397500 0.2700100 1.1696000 -0.0031859 0.0731150 0.0731150 -0.2554000 -0.2554000 0.7068200 -0.0077482 0.3391800 -0.0056757 -0.0056757 -0.0056757 -0.2504300 -0.0030139 0.2384500 -0.0012473 1.1255000 -0.1932500 3.6569000 -0.2256400 0.4307500 0.4307500 0.2050300 0.0063871 -0.0065050 -0.0065050 -0.0931390 0.2397500 -0.2579300 -0.2481200 -0.0031859 -0.0031859 0.0731150 0.0731150 0.0731150 0.2350400 -0.2687800 -0.2554000 0.0133530 0.0133530 0.0133530 0.0133530 -0.2511600 -0.2511600 -0.0056757 -0.0056757 -0.0056757 -0.0056757 -0.2504300 -0.0125830 -0.0125830 0.2384500 -0.0012473 -0.2104500 0.0000000 -0.1932500 -0.2602300 -0.2443600 -0.2867900 0.2050300 0.0063871 0.4439200 -0.0123000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 0.000 9.75105610 13.04109298 4.07218299 9.46351497 4.33521168 11.49916289 2.40234017 2.11283356 8.15478470 9.33950109 NA 8.18583236 8.26932588 10.64939236 9.11532384 0.94290855 8.09771455 9.56586332 10.89308769 9.77736744 8.39723695 7.70111929 11.30319476 2.26483665 7.52785855 10.79854349 1.26483665 -1.05709145 10.33037521 2.52787105 12.23981256 12.75266450 8.30703091 10.30484012 9.84677818 9.10150616 5.40232653 1.52787105 -0.05709145 NA 8.71932926 9.75827969 10.95027411 4.03036257 10.71432392 7.04092859 9.39307657 6.78210054 8.72425599 -1.05709145 11.96838201 4.15234569 4.49748463 9.46700716 6.15205764 9.09897953 8.97356364 8.92160681 9.71768345 5.49748463 13.39326996 1.26483665 10.41152042 NA 8.96109657 6.28274559 8.70776807 8.49748503 12.472937 6.914440 9.663995 17.687336 10.370733 11.036314 12.615211 11.205285 9.104028 10.154176 13.238522 10.597085 9.072180 7.759880 -1.057091 6.608233 12.022881 10.981815 6.629397 9.200284 8.805534 8.326601 10.137819 7.934418 6.891264 9.405399 6.813260 1.942909 7.965264 7.890329 12.083886 10.832020 8.476226 8.223667 10.024380 8.537221 10.866291 9.969420 10.238091 9.624135 11.441995 10.494605 10.607788 9.035654 NA 9.705660 9.531611 10.842631 8.566778 10.884920 10.517490 6.959704 13.476591 10.271010 10.524568 12.483146 10.967344 9.145020 4.697785 TCGA-AO-A12E 51 0 NA 1743 breast stage iib t3 n0 (i+) m0 female 2005 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 1 2 2 5 3 4 2 4 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 1 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.496534e-06 4.959201e-06 9.6477926 10.0444090 11.7287662 9.5021090 9.0023692 9.6038898 10.1841166 9.4707866 9.6220117 12.2595311 12.0266633 10.3052643 0.4500631 12.9509263 3.8005790 9.7661396 6.2880281 8.5927022 9.0529687 12.9700155 2.9355163 13.0363613 5.4500829 10.4912179 10.8408983 5.0229758 0.1281614 9.8203360 9.2366808 1.7131239 7.6038896 7.5916809 2.0350608 4.5711003 9.7988126 10.8834612 10.5185941 10.8003606 10.2016285 11.4777141 10.9006771 10.4193270 14.5313848 8.3329232 10.4250726 12.1341317 11.3230671 4.6673131 1.2980717 8.7854747 12.3263711 NA 11.3415644 5.9610468 6.2209142 4.4857102 10.2043039 11.6496341 10.4991162 12.3605023 12.9058226 8.3241436 10.3151990 10.1121332 11.0778007 11.2516312 4.6038874 11.1937408 9.9724698 -0.2868321 10.2248715 9.2149560 3.7170238 6.3473255 10.6423773 9.6482839 10.0142339 9.9423383 2.8830342 9.0845326 12.3756389 12.6399090 9.8229495 9.4042807 -0.0047786 -0.0047786 0.4409600 -0.0074045 -0.0074045 -0.0033951 0.4731500 -0.0109920 -0.0188280 0.4504500 -0.0103030 0.4462300 -0.0021492 -0.0021492 -0.4755900 3.6569000 -0.0045019 0.4664700 0.4615200 -0.4912200 -0.0040869 0.0040922 0.4272900 0.4272900 0.4272900 -0.0312920 -0.0312920 -0.0517920 0.4526600 -0.0125730 -0.0047786 0.0000000 -0.0074045 -0.0033951 -0.0010789 0.4511300 0.4511300 -0.0109920 -0.0188280 -0.0188280 0.4397800 -0.0687310 0.0085423 0.0020096 0.0020096 0.0020096 0.0020096 -0.0021492 0.0010384 0.0011771 -0.4753800 -0.4837100 -0.4721000 0.4664700 0.4437800 0.4160500 -0.4764400 -0.0040869 0.0040922 -0.4954300 0.4272900 0.4272900 -0.4709900 -0.0802100 -0.0517920 0.4526600 0.0134210 -0.4877000 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.457 -0.038 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.440 0.440 0.442 0.442 0.000 0.000 0.000 0.000 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.457 -0.038 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.440 0.440 0.442 0.442 0.000 0.000 0.000 0.000 7.9720774 11.6228869 4.6200116 10.1560623 3.7696977 10.6682844 2.2156165 2.6517291 9.0069737 8.3093085 -0.8719706 8.2057600 5.0470192 10.2412473 9.3093085 3.1725515 9.8755102 9.6687687 10.8270780 11.0839878 9.8048540 7.8372400 11.6168752 5.0229758 8.9954351 9.5829697 7.0199398 0.9355352 10.3219896 2.9861378 12.4280798 12.0106084 6.9799053 10.0195603 10.8734105 9.3802303 4.2779029 0.1281614 -0.8719706 3.6200116 9.0222163 8.9037665 10.1487891 6.5544216 8.6375751 7.1505241 10.8096144 6.2209142 10.0320381 0.4500631 11.1658749 4.1505272 3.3376112 9.8044705 6.1863104 3.8286011 10.3229132 8.5824555 8.0350470 -1.8719706 13.7323910 -0.2868321 10.2366808 NA 6.9547047 4.8560744 7.7373352 7.9209465 15.3490241 5.8830440 8.6536770 12.9509263 9.7707316 10.7848047 12.9700155 12.2614592 8.9698073 10.9045894 13.1839895 11.4313663 8.7854747 8.4019521 -0.8719706 7.2905479 11.0935799 10.867304 7.186148 8.175280 9.072136 9.776064 10.171095 7.019940 8.304329 12.026663 7.169816 2.215616 6.122509 7.293265 11.395236 9.948335 8.237987 8.850964 13.501531 4.757514 11.978583 10.518594 10.864347 9.362375 11.685620 10.047392 10.789044 8.908696 NA 8.798653 5.948335 11.341564 4.337611 10.738028 10.204304 6.992466 13.352309 10.425359 10.040297 13.327637 9.672638 9.484058 2.298072 TCGA-AO-A12F 36 0 NA 1471 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.040392e-07 10.03304356 8.83281471 11.00942325 8.78909343 8.95753769 9.11456822 7.75541038 11.43117273 9.01370343 12.55642211 10.98104455 10.55299506 1.25217341 12.46647140 3.73019431 9.26258044 8.80124921 9.30820932 5.37553299 7.08504218 0.02970023 10.82255020 7.17950707 9.99966916 9.25134701 5.92053151 0.02970023 9.76841510 11.81016295 4.25215070 10.45672341 7.73941812 0.02970023 4.76672766 8.49055689 10.72208481 9.74457773 9.09315502 9.70454071 11.34641855 3.61472162 9.71684381 15.07977853 8.10757228 9.18542133 11.12735309 11.03561827 4.30277965 -0.55512094 8.64569590 10.29146301 NA 10.34453194 5.02976206 5.10301078 3.44479956 10.11766466 12.12515688 9.17781267 10.69953072 12.87014443 6.08142272 11.06616247 9.91113893 11.18921079 10.49736537 3.35168486 11.44796387 7.50007941 -0.55512094 9.58434866 9.72962142 5.20155545 5.08865469 10.40371253 9.50481780 10.50177370 9.40335018 2.14522094 7.65181160 12.10222746 12.58130793 10.31554732 10.00226103 2.0849000 1.4679000 1.7370000 0.0146090 -0.0114730 -0.3190200 0.0940560 0.0691670 0.0040284 0.0022193 0.0022193 0.9279200 0.5079400 -0.3695200 -0.6718700 3.6569000 -0.6724200 1.6323000 -0.3045100 -1.0522000 -0.3252800 -0.3928600 -0.0074720 0.0828270 0.0828270 -0.2710500 0.1692600 0.1692600 0.8826600 -0.6657100 -0.3108500 -0.3021600 0.0352420 -0.6521800 -0.3061600 -1.0373000 -1.0373000 0.0691670 0.9604200 1.0226000 -0.1963700 1.0629000 1.0857000 0.3580600 0.3580600 -0.6585400 -0.3042800 -0.3695200 -1.0688000 -0.6619800 0.3406400 -0.6756400 -0.6843300 1.6323000 -0.3045100 -0.3045100 -0.6638300 -0.3252800 0.0356650 0.0632230 -0.0074720 0.0828270 -0.7055900 -1.1472000 0.1692600 0.1041000 0.0000000 0.1204900 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.675 0.675 -0.196 0.246 0.986 0.986 -0.466 -0.659 -0.321 0.152 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.675 0.675 -0.196 0.246 0.986 0.986 -0.466 -0.659 -0.321 0.152 7.37257519 12.91151114 3.99938672 9.85100236 0.15846630 12.78353376 -0.55512094 1.02977090 9.14697005 7.84354110 3.93664736 9.44402925 0.02970023 11.22697658 9.18119923 5.25215070 6.72092140 10.38143534 10.34188648 10.29185469 8.38537538 7.12075420 12.04191879 1.90423359 8.53358554 9.87838280 3.53225461 NA 10.16803173 0.02970023 13.92943148 13.06696361 7.81330406 9.70571687 6.82850211 10.50684350 4.76672766 1.90423359 0.76672236 1.02977090 8.63832259 10.84460935 6.30898332 6.26497548 9.02286795 5.92861430 10.34867925 6.62967281 10.99770656 2.96836728 10.56633085 3.02975323 4.30277965 10.86344851 6.45025284 4.37553299 8.74743641 6.48371583 5.72092140 6.15904382 13.82424343 -0.55512094 10.37331575 NA 10.19550435 4.55332364 8.00513047 7.22287410 12.956016 7.966398 8.085042 12.466471 9.182045 11.418315 7.085042 11.071419 8.572792 11.241243 13.275511 11.539535 8.645696 9.114568 3.730194 7.604669 11.317087 11.13217305 6.16589586 8.93761187 9.27768749 9.15818376 10.32155982 4.32744306 4.67361861 10.98104455 4.95258984 -0.55512094 11.09360434 8.97422786 11.83657797 9.36067680 8.60466886 8.54677294 9.79959765 3.99938672 11.98573544 9.74457773 10.01275344 10.67271412 12.47330781 11.39407694 10.35469050 8.22451690 NA 8.97515496 4.85419019 10.34453194 7.65668585 10.38767832 10.11766466 6.76221060 14.50354889 10.29342026 9.92103727 12.89129916 11.09225581 9.61847452 0.02970023 TCGA-AO-A12G 75 0 NA 1266 breast stage iia t2 n0 (i+) m0 female 2006 NA no other specify 0 white not hispanic or latino 5 2 4 2 3 5 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 9.2973749 9.7231490 11.3527056 8.7575567 8.9283703 8.6467387 10.3228295 9.2297802 10.8246406 7.3327079 10.7465143 10.1292830 -1.3219281 13.3924784 2.4854268 8.7319978 6.2630344 7.6724253 10.4862317 12.8543230 -0.3219281 13.4443938 5.1375035 9.6040046 10.8981479 5.8176233 -1.3219281 9.3584314 9.3273281 1.4854268 7.8529976 7.2016339 NA 4.7865964 9.6794801 10.0709259 9.1487308 12.4862317 10.1497471 10.5853382 5.8176233 10.6875507 15.1913523 6.0631578 10.6865005 10.1744264 10.7282607 4.0703893 5.8278190 8.9212459 10.8685139 -0.3219281 10.1282522 5.5235620 5.2172307 3.9634741 10.4329594 11.3008101 10.0317701 12.0744091 12.4345240 8.6865005 10.9818527 10.5026329 11.0301153 10.6227840 4.5109619 12.2969162 13.2027360 1.0000000 10.4283602 9.9431008 2.3829439 5.1699250 11.2969162 9.7176764 10.2649117 10.7592224 3.3219281 5.9634741 12.5408061 12.2089659 9.6858000 9.6452982 -0.00263220 0.49352000 0.55319000 0.01209700 -0.00249380 0.02955900 0.03608800 -0.00479990 3.65690000 -0.61911000 0.00402430 1.13400000 0.00555290 -0.61585000 -0.61623000 0.80150000 2.03930000 -0.00761010 -0.00761010 -0.21404000 0.00000000 0.01586600 -0.60381000 -0.01491600 -0.01491600 -0.01587900 -0.01587900 1.02480000 0.00972760 -0.00263220 -0.00263220 -0.00456950 -0.61652000 -0.26107000 -0.61460000 -0.00362090 0.00291330 -0.00479990 -0.00479990 0.00055459 -0.63538000 0.00833510 -0.61604000 0.00513590 0.00513590 0.00513590 -0.61393000 -0.61585000 0.03877100 -0.61623000 -0.02274400 -0.61403000 -0.61403000 -0.00761010 0.00434160 0.00434160 -0.21404000 0.00000000 -0.00121540 -0.61498000 -0.62436000 -0.01491600 0.01377200 -0.38694000 0.53186000 0.00972760 0.00680440 0.58112000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 0.000 8.6865005 13.2555597 6.7708290 9.4362951 2.7467427 11.4161642 0.2630344 NA 8.8189017 8.3183168 -1.3219281 8.2094534 2.4854268 10.7176764 8.7018263 0.2630344 7.9588427 9.3065174 10.3544698 11.2290591 9.1426993 7.4329594 11.6562461 2.7655347 8.3146965 10.3219281 4.9068906 NA 10.7374164 1.0000000 13.1135468 12.7228075 8.8290884 10.2312212 7.5077946 10.0095487 4.8678965 1.6780719 -0.3219281 3.1375035 9.0628557 10.1719274 9.9738408 4.5849625 8.8674394 5.9541963 9.9852727 6.8278190 9.8105716 NA 11.1927860 2.3785116 4.8875253 9.8847505 6.6844260 3.7224660 9.4008794 7.6322682 6.6553518 2.1375035 14.4235887 1.6780719 10.0964516 -0.3219281 7.7602209 5.7114949 7.8972404 8.1022382 12.1296140 4.8073549 8.9068906 13.3924784 9.8041310 11.0476693 12.8543230 11.8044537 10.8083207 10.6340850 12.5867460 10.6308132 8.9212459 11.5605239 0.6780719 7.5391588 10.2728630 10.506605 6.694880 8.758889 8.419539 7.965784 9.709546 6.392317 5.733354 10.746514 8.037821 1.847997 6.104337 4.691087 11.056638 9.358431 7.979568 8.268659 11.702519 4.847997 10.473994 9.148731 10.343852 10.151778 10.946614 9.691395 9.806711 8.431289 3.584963 8.787341 5.523562 10.128252 6.177918 9.900867 10.432959 6.954196 14.560261 10.698705 10.523562 12.992443 10.161384 8.332708 1.263034 TCGA-AO-A12H 69 0 NA 1234 breast stage iia t2 n0 (i-) m0 female 2008 NA no other specify 0 black or african american not hispanic or latino 3 5 2 NA 3 5 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 10.36303185 9.72147144 11.72427987 8.42545301 8.52802309 9.12663608 10.73462385 9.81665266 9.23063702 14.21327456 7.96412192 11.01546893 NA 12.15968960 2.48362233 9.70051723 6.64409421 8.09487049 8.31204522 14.69948297 -1.21424023 14.81903560 4.95075301 10.04397969 10.72876201 8.95840829 -1.60384051 8.52283180 9.49419797 0.71808758 6.95075534 6.79277078 -0.60384051 3.15104699 9.52416028 10.03233741 10.56044442 9.46896854 9.64587203 10.77066216 -0.01887801 11.51947910 14.72364846 8.22714082 10.71046595 11.84505663 10.84737710 3.68157295 5.89601264 8.18895621 10.25686501 1.71808758 11.38626992 4.17752718 4.44056025 3.39615949 10.73907402 11.87909997 10.44737494 10.29816421 12.29164661 8.72484090 10.67083529 10.75128303 11.24889057 10.34234118 3.98113113 11.81954457 12.56507311 0.98112199 10.23615702 8.77770901 3.10269172 5.42958919 10.78794662 9.62438351 10.58011146 9.61412363 2.30305008 6.89202059 12.87638817 10.76930305 10.30942940 9.29098370 -0.00067222 -0.00067222 -0.00828820 0.00210140 -0.00229850 0.03964100 0.00432300 -0.00219600 -0.00219600 0.01253700 0.01253700 0.01253700 0.00224010 0.00224010 -0.00191910 -0.00191910 -0.00191910 0.00099147 0.00099147 -0.01048700 0.00279540 -0.01131500 -0.00108790 -0.00108790 -0.00108790 0.00974860 0.00974860 0.00974860 -0.00510200 -0.00067222 -0.00067222 -0.01592800 0.00210140 0.03964100 0.03964100 0.00432300 0.00432300 -0.00219600 -0.00219600 -0.00219600 0.00738180 0.00000000 0.01253700 -0.01172800 -0.01172800 -0.01172800 -0.01172800 0.00224010 -0.01548800 -0.00191910 -0.00191910 -0.00191910 -0.00191910 0.00099147 0.00099147 0.00099147 -0.01048700 0.00279540 -0.01131500 0.00196260 -0.00108790 -0.00108790 0.00335070 0.00974860 0.00974860 -0.00510200 -0.00261140 0.00571280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.74710539 11.12960508 3.20351441 8.72034653 2.45362293 10.46360039 2.09659921 NA 8.30004774 8.76576346 0.71808758 5.98862334 0.98112199 10.47731649 9.32985665 -0.01887801 3.30305008 9.29401138 10.60226460 11.62753717 9.65155457 7.72708318 11.47164514 3.82243444 9.87139274 9.69994666 2.48362233 2.48362233 11.06261190 3.15104699 13.20618525 12.33464291 7.28186235 10.53954920 8.47831500 9.22668120 2.56608449 2.98112199 -0.60384051 3.75372219 9.27037897 10.56546466 10.31540173 1.20351441 7.23111075 7.53315683 10.45246499 4.41853405 9.64052983 NA 9.94883501 1.98112199 8.72484090 9.86801905 7.03402198 0.39615949 8.86885681 7.22588897 9.48561641 -1.60384051 14.25482697 0.71808758 11.16517728 -0.60384051 8.57856026 5.48362878 7.92559657 9.87544097 13.444879 5.871900 8.874936 12.159690 10.669915 10.411232 14.699483 6.332805 8.789556 10.315774 12.673526 11.221721 8.188956 9.744341 0.981122 7.515107 13.277184 10.7073466 8.3342755 8.6031801 9.2734502 7.1376326 10.1124881 5.7537168 9.8234789 7.9641219 7.6297857 4.3734464 4.0966076 6.5855455 9.2703790 10.5970646 8.8463463 9.3157743 10.5424164 2.0965992 12.2994679 10.5604444 10.7349024 10.1593783 13.4597717 8.6345708 10.4504311 8.5318754 -1.6038405 8.5820324 2.0965992 11.3862699 5.4941980 11.5885081 10.7390740 6.7581099 14.2987060 11.0445236 10.3386805 12.3885733 9.5692184 9.3269033 -0.6038405 TCGA-AO-A1KO 46 0 NA 448 breast stage iib t3 n0 (i+) m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 11.2492669 10.5444584 11.7438141 10.1375851 8.4998220 9.3098410 9.9375143 9.9051600 9.7149579 13.3055091 10.5295148 10.7086265 3.1752212 11.7593520 4.3510770 9.8217499 7.7354870 10.1495330 11.2196187 10.1133883 4.7953773 11.5986907 7.8591291 9.1918266 10.6154017 4.6297879 NA 7.3540281 8.8466018 4.3029770 8.7579590 8.9091815 3.1207832 4.0053012 10.5767362 9.9136922 10.1727178 11.8889612 10.7337871 12.4063569 9.2991544 9.4118590 14.1581126 7.9944575 8.6551547 11.8587391 11.9826988 5.4427047 2.2276795 9.8899789 13.6923836 -1.5794906 11.7948333 6.1885216 7.1033319 2.8797646 11.0162939 12.5224769 10.0313618 12.4375805 12.9599806 6.7377503 11.4100864 11.6105785 11.4870991 11.7725185 5.7149571 11.6830192 10.2630803 0.4202937 9.6929669 9.7729323 3.5128842 5.9121900 11.1414363 10.5001552 10.5707191 10.1951241 6.1345824 9.5196850 12.8730288 13.1104988 10.1789768 9.7674047 0.04188300 0.04188300 0.04188300 -0.00550800 0.05067700 0.00000000 -0.00346270 -0.00137680 -0.02411400 0.00319100 0.00319100 0.00319100 -0.00069303 -0.00107180 -0.00401620 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.01062300 -0.00097017 0.00180300 -0.00373950 -0.00373950 -0.00373950 0.00277450 0.00277450 0.00277450 0.00221930 0.04188300 0.04188300 0.00360760 -0.00550800 0.00000000 0.00000000 -0.00346270 -0.00346270 -0.00137680 -0.02411400 -0.02411400 -0.00193990 -0.00193990 0.00319100 0.00362910 0.00362910 0.00362910 0.00362910 -0.00107180 -0.00107180 -0.00401620 -0.00401620 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.00512270 -0.00719580 -0.00137080 0.00180300 -0.01642900 -0.00373950 -0.00373950 0.00458000 0.00277450 0.00277450 0.00221930 -0.01739100 0.00388540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.8360788 11.5041488 6.0202510 9.9701217 3.1207832 10.2135339 -1.5794906 4.9281334 8.2548080 10.8892156 -1.5794906 8.3172145 4.6871223 9.4729052 9.3488554 1.5902427 10.2806482 10.8712905 10.2771516 9.8513123 9.7141478 8.6824318 10.2094631 2.2276795 9.3969012 10.0984971 7.4061786 NA 8.5444583 4.5700864 13.8289986 12.2473820 7.6563512 11.1279119 8.0962940 8.9091815 8.6491559 2.3272275 -0.5797063 -1.5794906 7.8466018 6.7286756 8.4076013 6.6824314 8.5584425 4.3510770 10.2179986 6.9977655 10.1168700 11.6491558 12.2640619 3.8797646 6.0927635 9.6810509 4.8249664 6.2147524 8.5077998 8.6212358 7.1584289 -1.5794906 14.5958477 3.0052922 10.1702065 NA 7.7888436 7.5827284 8.1380137 8.7456424 11.8338659 4.2016966 8.8190809 11.7593520 10.7153225 10.3875634 10.1133883 12.2871331 9.4749414 11.4998219 13.8083880 13.1507011 9.8899789 7.8169420 -0.5797063 8.3075579 11.3204491 10.979475 7.016526 8.979714 9.444784 7.737750 9.897564 5.920184 6.481032 10.529515 3.943903 6.742265 9.327979 6.374010 12.898222 10.951962 10.371258 6.590262 12.220630 6.497152 12.248041 10.172718 10.252436 9.279872 12.322335 9.729813 11.190175 9.215565 NA 8.573965 8.060582 11.794833 6.491800 11.321483 11.016294 7.230909 15.143838 10.130283 10.870260 12.837992 9.616324 10.268960 5.188520 TCGA-AO-A1KP 77 0 NA 2513 breast stage iia t1 n1 m0 female 2003 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 1 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 11.008460627 9.745565593 11.052143874 8.092135010 9.526975886 8.999843324 8.796479653 9.796479815 8.384666344 12.958253307 6.678849398 10.846437998 3.899243316 11.780795272 4.473475225 8.734938875 7.355753673 8.963892248 8.870910559 13.387525864 1.407407140 15.450883573 1.992333382 10.510713440 11.714587087 4.616839926 1.214746523 4.616839926 9.544377386 2.494850785 6.874992410 5.961975162 -0.007666618 2.577320055 9.524379905 9.732129428 10.895477433 11.380186624 10.422801383 11.710738946 2.494850785 11.189155799 12.845658342 6.926786991 8.979139057 11.667129553 11.395715934 4.515907950 7.459954501 8.984815181 11.049889312 0.407407140 10.972964426 6.271573210 4.384664618 2.577320055 10.610734292 12.796681518 10.631387987 11.900616314 13.194472611 8.564733311 11.481527766 11.354659759 11.703585549 10.141248973 4.028852006 11.492526748 12.669701409 -0.592701640 9.971059221 10.190793853 3.801417366 1.729313480 11.948240808 10.932907138 10.320649729 9.204237085 0.729356990 8.470781279 13.180628548 11.317091929 10.257573118 9.609510095 -0.86837000 0.83608000 0.82689000 0.01084200 -0.00142780 -0.01119800 -0.00318590 0.00027728 -0.56823000 3.65690000 3.25760000 1.83300000 0.02918400 0.04245300 0.00845470 0.01382600 0.01382600 0.01175200 0.01175200 -0.01050800 -0.02068700 0.06923900 0.09827000 0.09827000 0.08045600 0.06293700 0.06293700 0.06293700 0.16640000 -0.84563000 -0.86837000 -0.00980530 -0.00142780 -0.01119800 -0.01958900 -0.00318590 -0.00318590 0.00027728 0.00027728 -0.02356600 -0.01202400 0.79917000 -0.89603000 0.01630900 0.01630900 0.05736800 0.05736800 0.04245300 0.04245300 0.04004400 0.01382600 0.01382600 0.01810300 0.01175200 0.01175200 0.01175200 -0.01050800 -0.02068700 0.06923900 -0.86185000 0.09827000 0.08045600 0.01126100 0.06293700 0.06293700 0.16640000 0.00889200 -0.88604000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.278 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.121 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.796 1.692 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.278 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.121 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.796 1.692 0.000 0.000 0.000 0.000 7.413010950 10.475828662 8.311268321 9.763838284 3.764940573 10.590401321 1.407407140 NA 8.481527816 8.266920967 -0.007666618 7.836918867 1.407407140 10.785410127 9.746679575 3.051250277 10.195288904 9.928005013 7.954280659 10.629275466 9.260656838 7.626554489 9.214741181 -0.905628789 9.710596212 8.828399288 3.051250277 -1.592484088 10.329599033 5.891202864 13.565522577 10.775619910 7.168937820 10.479518878 7.690474366 9.190384483 2.930945449 2.930945449 -0.007666618 3.899243316 7.919139231 7.025771883 11.325504135 2.107821756 7.432221173 5.135305018 10.958133113 5.816776321 10.205452997 NA 8.665952307 0.729356990 4.022092565 10.303760317 5.910893325 0.407407140 9.378211175 4.407386744 3.799698664 0.729356990 14.349236293 NA 9.609510095 -0.007666618 7.901241619 6.072723231 8.993287712 9.584805825 13.605234 5.764938 9.263812 11.780795 10.035914 11.155579 13.387526 11.239881 9.145479 10.500143 13.396736 10.561571 8.984815 8.757220 1.992333 8.011013 12.286395 10.769330084 7.579813723 8.724798953 9.928005013 8.755007722 11.073079728 1.992333382 4.850329381 6.678849398 6.786764928 3.961975162 7.988586989 6.717317247 9.055743916 10.475156744 10.045822172 7.518521763 12.019333230 3.214746523 14.631286186 10.895477433 11.232941367 10.290793223 11.434255518 8.365939193 10.606445097 8.060231169 NA 8.227836362 3.314275980 10.972964426 6.332199500 10.250914807 10.610734292 6.747235656 13.510469159 9.897735813 11.212525567 11.489036141 9.769878166 10.654423726 -0.007666618 TCGA-AO-A1KQ 84 0 NA 1882 breast stage iiib t4 n1 m0 male 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 5 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.10538187 9.21485044 11.15097581 7.20772597 10.51770127 9.62365602 9.56167344 10.17765623 9.61739694 13.24959296 11.42475191 10.59481920 3.28648199 12.50710030 3.28648199 8.80217997 7.24995440 8.89824282 10.71484033 12.86438098 3.13448382 14.12138566 0.96458346 10.70135984 11.04503649 6.47234642 -0.03549047 8.72776427 10.37765097 0.54952132 6.86541903 6.01983533 NA 3.96455574 7.27289101 10.73232271 9.36969352 10.02592328 9.32868659 10.65236513 4.48811649 11.32347793 14.05313327 8.72488931 9.64930073 10.70896548 10.94968243 3.28648199 3.96455574 8.15437663 10.04536952 -1.03534261 10.70854490 5.53440717 6.57188307 4.24995346 9.56167344 11.70580835 10.16483768 11.26290108 12.47679867 7.96736692 11.11112073 10.61335899 10.81552019 10.13885363 3.35687624 11.98709326 9.09640893 -0.03549047 10.76423841 8.85177277 2.56149722 4.32210121 10.60162967 8.83645722 11.02254377 9.80217997 7.38661698 9.01167593 11.26175493 11.24908702 9.99659777 8.92020188 -0.3634000 0.4403700 0.4592200 -0.4350800 0.1158000 -0.1181400 -0.3916300 -0.0359930 -0.5088800 0.5162900 0.6351800 2.3169000 0.0942010 0.1197600 0.1099400 0.0445740 0.0445740 1.0515000 1.1936000 -0.8557500 -0.0223810 0.2065600 -0.4230900 0.7147100 0.7147100 -0.2273600 -0.2273600 0.6929700 1.2623000 -0.3634000 -0.3634000 -0.4156400 -0.4309400 0.3723200 -0.0533410 -0.0851920 0.4576800 -0.0359930 -0.5088800 0.1005100 0.3928000 -0.0094046 -0.3267000 -0.3876100 -0.3876100 -0.3876100 -0.3875000 0.1197600 0.1858600 0.0268060 0.0445740 -0.4368000 -0.4368000 0.0441480 -0.1758800 0.1999900 -0.4840700 -0.4248400 -0.2332500 -0.5157900 -0.4230900 0.7147100 0.2509000 -0.0060179 -0.2273600 -0.1534900 0.0164250 -0.8971800 0.000 0.000 0.000 0.000 0.652 0.122 -0.107 0.000 -0.233 0.136 0.136 0.292 0.715 0.251 0.251 -0.221 -0.221 -0.363 0.459 1.146 1.262 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.388 -0.388 -0.142 -0.142 0.000 0.000 0.000 0.000 0.652 0.122 -0.107 0.000 -0.233 0.136 0.136 0.292 0.715 0.251 0.251 -0.221 -0.221 -0.363 0.459 1.146 1.262 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.388 -0.388 -0.142 -0.142 8.79268847 11.95571953 7.34825632 9.06652758 2.96454650 10.72568765 2.96454650 NA 9.28873252 6.82253259 NA 6.96263462 2.54952132 11.13134280 9.32539923 4.05201586 7.50371048 9.08738010 9.54857495 11.39238864 9.99703859 7.24532262 10.02051234 0.89437155 8.62988806 9.63520824 3.54950900 -0.03549047 11.31935239 3.54950900 13.17818790 12.41434553 7.03601422 10.20295675 9.89455011 9.90266136 4.63697836 2.28646720 0.96458346 9.35794254 8.72610335 9.82253307 9.83722692 3.05201586 5.48811328 8.37817996 10.74427136 4.82253132 10.53630473 NA 9.39604964 NA 4.35686920 10.06979922 7.21527671 6.12442326 9.43927198 7.72610301 7.39500451 NA 14.13600252 -0.03549047 10.71274485 NA 9.58934741 4.54951516 7.28648014 7.36115687 14.2815869 4.9418340 9.2242952 12.5071003 9.1307152 11.1187372 12.8643810 12.1626901 9.0860855 10.4964208 12.6411703 11.3237525 8.1543766 8.6873596 0.9645835 8.0144005 11.3892432 10.3395915 6.0625837 8.7475338 8.7244402 10.1957733 9.3764549 6.9418317 8.0520148 11.4247519 5.6787987 3.2864820 6.6580386 8.4767790 8.9026615 9.8053300 9.2441626 9.8766928 8.2289947 6.1642251 13.2444694 9.3696935 10.6779386 10.5114465 11.2257655 9.2005661 10.0373546 7.3395917 NA 8.6049053 6.8287382 10.7085449 7.1344766 10.3110657 9.5616734 7.0413678 13.7202742 10.6200828 9.9121889 12.3010586 11.1104842 8.5644651 0.9645835 TCGA-AO-A1KR 51 0 NA 2141 breast stage iia t2 n0 m0 female 2005 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 6.589149e-07 8.4366628 7.9590131 10.5026688 6.5178867 10.3863599 9.1847261 9.5809864 10.1098525 10.8976128 11.9492851 11.1072302 9.7730014 4.2272097 12.9441514 2.5897875 10.1133415 7.2653450 8.6866409 8.1341003 6.5073174 NA 11.8596854 8.5231424 10.5986625 10.9056838 3.8792843 NA 9.2175160 11.7335879 1.0048250 8.5283791 7.0123117 NA 3.2272020 6.2400338 9.0726994 9.0400743 9.5935317 8.6244256 10.2708227 6.3505927 7.8627979 14.2169587 6.6381521 9.4156216 9.8955880 10.6977231 6.1880389 4.6677843 8.7190626 11.9739637 0.4198625 10.4429157 2.5897875 5.2527449 2.2272174 8.7350042 12.1611108 10.1613215 11.7270553 11.9744434 5.8955886 10.8040987 9.3942691 9.5809864 10.4394453 2.4198625 11.8369159 7.6438562 NA 10.6176856 8.6022490 5.3027431 2.7417905 11.8249960 9.1306609 11.3047882 7.8078720 NA 6.8292458 11.2723840 14.1192643 10.5119510 9.9286396 0.03533500 0.93752000 0.93549000 -0.00761010 1.14380000 0.00000000 1.09560000 -0.17398000 0.38982000 -0.34102000 3.65690000 3.65690000 0.30170000 1.16980000 -0.30500000 0.00027728 0.00027728 2.02750000 0.01126100 -0.34169000 -0.31622000 -0.02068700 -0.34343000 -0.02315500 0.33869000 0.21024000 0.21024000 0.23876000 0.07685400 -0.00968060 -0.28988000 -0.06356900 -0.33699000 -0.02534600 -0.36170000 -0.32530000 -0.32158000 -0.17831000 0.02286500 0.33804000 0.01377200 0.27789000 -0.34102000 0.10191000 -0.31494000 -0.31762000 -0.32434000 -0.00747200 -0.03054000 0.08319800 0.00027728 -0.01504200 -0.01504200 0.39621000 0.01126100 0.01126100 -0.31190000 -0.31622000 0.60955000 -0.29756000 -0.34343000 -0.33272000 0.02104300 -0.35396000 0.22314000 0.00958830 0.04089200 -0.00581400 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 0.000 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 -0.315 0.150 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 0.000 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 -0.315 0.150 7.0709066 11.3816659 5.0048160 7.8833789 2.6783649 13.3397420 -0.5801375 1.4198625 9.6725199 9.4099586 NA 7.6146112 4.3740518 11.0257969 9.6329587 4.0637100 3.3267387 9.1115981 9.5797259 12.4845973 9.0160444 6.5178867 10.5555638 0.4198625 7.2207546 9.8720957 4.0637100 NA 10.4771694 3.4198490 14.7190983 13.5616424 6.1063546 8.5922821 10.2264041 10.6665951 3.8121696 0.4198625 NA 1.7417905 9.3342395 10.8690032 8.5947803 3.1203022 10.7525513 8.7707937 9.6630284 4.2272097 11.2142704 1.4198625 12.4209108 NA 5.9434174 10.4705603 8.0224793 4.0637100 7.5387958 5.3505927 7.5491378 6.8627985 15.2463285 -0.5801375 10.7790550 NA 9.9667490 2.4198625 8.1847261 6.3623682 11.509047 9.645062 7.691318 12.944151 9.834540 11.702653 6.507317 7.639023 8.974443 11.847429 13.047616 11.046932 8.719063 8.663029 2.419862 8.137531 9.814317 10.259846 1.419862 7.899635 8.909703 7.943416 9.008906 5.147775 4.419856 11.107230 10.405696 NA 9.546559 8.490110 8.347632 8.326745 9.194642 9.560684 4.326746 5.201214 11.644962 9.040074 10.077173 11.032723 11.283266 9.460144 10.387081 6.338719 NA 9.410866 7.188039 10.442916 4.374052 11.157524 8.735004 7.464248 14.772139 10.417740 9.990659 11.722493 12.060551 8.841919 4.277836 TCGA-AO-A1KS 69 0 NA 16 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 4.508365e-07 11.393520 11.094669 11.919023 9.687531 8.544814 8.120384 9.640515 10.876413 8.597464 12.825757 12.285541 11.130628 4.402709 12.208552 4.972564 8.356904 6.866232 9.060919 12.168097 14.072450 3.210062 13.954235 5.368492 9.036611 11.864187 7.955376 NA 5.222886 10.499093 1.724650 7.882488 6.961128 12.906036 3.612164 11.164466 11.662156 10.333445 11.770122 11.080207 12.477016 11.768620 12.183247 13.003375 8.150934 8.855978 11.053759 12.801651 4.075130 5.447100 9.932138 11.811037 -1.597278 12.261660 5.511231 6.733624 3.210062 11.297146 12.516368 10.037065 11.501068 12.728575 7.032063 11.947068 11.474930 11.568870 10.992826 5.592532 12.248295 12.311850 NA 9.516449 9.717857 2.491879 6.260688 7.920377 10.609722 10.580438 10.789647 6.799311 9.865721 12.901120 12.242206 10.476179 9.078664 -0.553170 0.336170 0.367720 -0.153110 -0.075478 -0.168150 0.184340 0.198930 0.162800 0.414460 0.414460 1.794700 0.272530 0.272530 0.619330 0.619330 -0.612420 0.231070 0.231070 -0.160390 0.678580 -0.703970 -0.608440 0.306010 0.306010 0.176790 0.176790 0.176790 3.656900 -0.553170 -0.553170 -0.518050 -0.607190 -0.168150 -0.177460 0.184340 0.184340 0.198930 0.162800 0.162800 -0.108150 -0.108150 0.414460 -0.166250 -0.166250 -0.459660 0.429230 0.272530 0.272530 -0.629600 0.619330 -0.612420 -0.629600 0.231070 0.231070 0.258550 -0.187730 0.080976 -0.150780 -0.597010 -0.608440 0.306010 0.137170 0.176790 0.176790 0.285280 0.095798 -0.453290 0.273 0.273 -0.010 -0.630 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.182 -0.182 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 0.000 0.273 0.273 -0.010 -0.630 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.182 -0.182 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 0.000 8.37712201 11.04317811 6.19712231 8.91742131 2.35225005 10.23994096 -0.59727782 NA 7.82266770 7.62670852 -0.01231532 8.91155168 1.21007710 10.09095754 9.62005905 2.79501881 9.02567417 10.99912996 9.54800248 9.41742513 9.64023391 8.29903947 9.22288617 1.46445917 8.83315986 8.82372007 1.21007710 NA 10.09139466 4.59252880 11.51856371 11.69272608 8.37137416 11.33085544 9.10314694 9.34888237 6.86623171 2.10316189 0.40272218 7.01373246 6.85803447 5.04656527 10.16093040 4.63152341 8.21191262 5.59253179 9.72407160 7.22288665 9.64349854 NA 10.66127324 1.21007710 4.23559687 10.43016398 4.51332019 2.65062672 7.98579015 8.21809045 7.34228628 NA 13.20714078 1.40272218 9.09619411 NA 8.77883246 5.06092069 9.13487472 9.08833217 14.182059 6.858034 8.864187 12.208552 9.560143 10.786681 14.072450 11.768073 8.618240 11.629119 12.987846 10.882235 9.932138 8.035703 1.724650 7.812098 13.403455 11.195701 7.482192 9.281524 9.959213 9.842019 11.285259 4.531993 9.054656 12.285541 5.130626 NA 5.631526 8.146330 11.455105 10.685217 9.993762 5.333445 12.844484 5.886523 13.957696 10.333445 10.930917 10.198747 11.952011 9.263018 11.025217 9.174197 10.702488 7.823720 4.333445 12.261660 6.799311 10.601459 11.297146 7.306589 13.107259 10.006797 10.233222 12.660463 11.019486 10.050166 2.926265 TCGA-AO-A1KT 78 0 NA 541 breast stage iia t1 n1 m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 2 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 4.855162e-07 10.5616938 9.0959344 10.8274997 7.4926239 9.2116557 8.6713532 8.1085621 9.5034219 10.0581886 14.5982134 10.6499161 10.2334381 3.1241958 12.8947143 1.2662168 10.3292698 5.3642432 9.2941178 6.3160606 12.4387175 2.7897710 14.2688950 5.9666519 10.2520538 11.3480281 6.5329979 1.9666519 10.1613743 11.0397632 2.3536620 8.1427289 7.2233135 -0.7338431 3.1730954 9.6254122 9.9596987 10.6769281 10.2323568 8.6270589 10.9082635 8.2101916 7.8772369 15.0514983 6.8858818 9.1587546 11.2171322 10.5881400 4.4159614 5.0735675 8.3010109 9.4817447 0.2661569 10.7371249 8.1210802 5.7500276 4.6924774 9.5545012 11.5788112 10.5651336 11.6103690 12.3867737 8.5756882 10.3925937 10.1591492 10.7961303 10.1093478 3.8208019 10.9787388 11.9510700 -0.7338431 10.5303612 9.5277192 1.8523585 5.6325329 11.1203010 9.3187798 11.0530940 9.8398590 5.0735675 8.0895792 12.1716928 10.9896595 9.8707651 9.1700936 -0.0890140 0.4665600 0.4665600 0.6318900 0.0000000 -0.1723400 -0.0074289 -0.2396000 -0.6922400 3.6569000 -0.7239400 1.2492000 0.0224440 0.0224440 0.5768300 3.6569000 2.5441000 0.0046284 0.0046284 -0.7230500 0.0119580 -0.1924900 0.0234260 0.0234260 0.0234260 -0.7191500 -0.2360600 -0.2360600 0.6814300 -0.7330100 -0.0890140 -0.1894900 0.0000000 -0.1723400 1.0015000 0.0196430 0.0196430 -0.2396000 -0.6922400 -0.6922400 0.0061090 0.0061090 -0.7345900 -0.2165500 -0.2165500 -0.2165500 -0.2009900 0.0224440 -0.7233200 0.5768300 -0.7377500 -0.7117600 -0.7117600 0.0046284 0.0137720 0.0137720 -0.7230500 0.0119580 -0.1924900 -0.7419400 0.0234260 0.0234260 -0.5177400 -0.7191500 -0.2360600 -0.7253500 0.4403700 -0.0026322 0.000 0.000 -0.149 -0.726 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 0.000 0.000 0.000 -0.149 -0.726 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 0.000 8.5481418 13.3916253 9.0102047 9.6515350 1.3227935 10.4914192 -1.7336032 NA 8.9975309 9.3282580 -0.1488007 7.9350967 1.2662168 10.5940451 8.5188774 5.4361352 7.2087260 8.7520411 9.0998927 11.1079727 8.9167429 7.2492054 11.0475715 2.4361352 9.5004304 10.2809298 1.2662168 NA 10.6121714 1.9666519 12.3080421 11.7207682 7.7378868 9.3980688 8.4805309 9.2767400 3.3106019 -0.7338431 -0.7338431 7.4560365 7.9244236 7.5306545 9.7348359 2.7256539 8.5105636 7.5722735 10.5768246 5.3430276 9.9350968 -1.7336032 9.2492054 1.9666519 3.3955016 9.7042395 6.9627618 3.7256430 9.9688174 7.5790949 6.4411382 1.0735461 13.7427998 -0.1488007 11.3435283 -1.7336032 6.7419456 4.3747335 8.2899663 9.0646838 15.3741908 6.6237645 9.0606276 12.8947143 9.5556544 11.3289326 12.4387175 10.7018821 11.2817419 10.3146987 13.2407161 11.0753771 8.3010109 9.0068357 0.5881329 7.4805309 10.8994341 10.9279899 3.3536762 9.0855925 9.3838550 9.0076788 9.8726910 5.9527133 4.1241958 10.6499161 6.9907257 4.0210977 5.5971289 8.0383122 10.7687950 9.9302146 9.2571738 9.2021135 9.4229270 5.3214952 12.1373018 10.6769281 10.6803685 9.0951417 10.1457951 9.2913515 10.5165102 7.4336297 -1.7336032 8.7226382 5.7897736 10.7371249 7.6477549 10.7389027 9.5545012 7.1148345 14.3971041 9.9275447 9.4835637 12.5758303 9.7174230 9.5728433 0.8511993 TCGA-AQ-A04H 61 0 NA 754 breast stage iiia t2 n2a mx female 2009 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 3 1 1 2 NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.629947e-06 5.201959e-07 10.1576342 10.0521744 12.2566007 10.3153419 8.4559876 9.1460821 11.4424939 10.3781697 10.6672998 14.6369206 12.2585920 10.9091499 -0.1818039 14.9680480 3.6255160 7.9318975 7.3233052 8.4727916 8.7300465 13.3696634 NA 14.2861429 0.2331518 9.4921945 11.1628211 7.4426458 -0.7668482 7.6782079 10.3933794 1.9336482 9.4365408 6.7606694 3.6926281 5.1520576 10.3133442 10.2789525 9.5523004 9.7220371 10.4571945 11.4233262 NA 11.2243604 15.2740391 9.1165997 10.1165999 11.5018811 11.8331057 4.0405506 NA 10.6518361 9.7385083 -1.7666027 10.3328694 3.9336293 4.7877824 5.2666142 10.7142354 11.8796391 9.3553738 11.1402713 12.8270508 8.2303721 10.5885439 10.2951479 11.1297145 11.1114354 5.2331940 14.9587988 11.6095896 NA 10.5819210 9.0461723 1.8193412 4.7723502 10.6732834 9.5802605 10.3685815 10.3615095 1.5551290 3.4811181 11.4004542 10.4423415 10.4757715 9.5618678 -0.0058140 0.4696400 0.9826200 0.4977000 2.7364000 0.0019418 0.5482400 -0.0146940 -0.0035174 -0.0052610 0.4669000 0.5075900 0.5088000 0.0058309 0.0056919 3.6569000 0.0027745 -0.0041546 -0.0061750 -0.5228700 0.0164250 -0.5088800 -0.5365200 2.3678000 3.6569000 -0.0284910 -0.5274700 -0.5274700 1.4808000 -0.0058140 -0.5173300 0.0068044 0.4977000 0.0019418 0.0019418 -0.0024938 -0.0024938 0.0066653 -0.0033243 -0.0022168 0.0000000 0.0203430 0.0132130 -0.0073339 -0.5196900 0.4975300 0.4975300 -0.5280900 -0.5280900 0.0056919 0.0056919 -0.5316500 -0.5313400 -0.0041546 -0.5541700 -0.0102320 -0.5228700 -0.5286900 -0.5088800 0.0101460 -0.5365200 -0.0269880 -0.4997500 -0.0284910 -0.5274700 -0.5410800 0.0101460 0.0033299 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 0.000 7.6740623 11.7700471 2.4811181 8.9214432 3.3206580 11.3171707 1.4031041 NA 8.1668836 6.9813858 NA 6.8371523 0.5551290 10.4837874 9.3358247 4.0911751 6.9336328 9.8716288 6.9474382 10.2534783 9.9921155 7.6190549 11.8658473 1.6926057 10.2590246 10.0688485 3.1400915 2.6255043 10.5937656 3.3624699 11.4250232 11.7053760 8.2992822 9.9179414 7.0501762 8.8770491 2.1400915 6.1873897 -1.7666027 4.3417154 8.7547933 8.4254857 9.9223172 3.4031177 2.8874083 9.1960889 9.9830623 7.2360075 10.3627978 -0.1818039 8.8607267 2.8181552 5.5730442 9.6150493 8.3249852 2.9336293 8.8797517 8.2830416 3.7877772 -1.7666027 13.1388149 0.2331518 10.8540999 NA 7.1609706 5.7330397 7.9091496 8.4535711 15.100513 5.546076 8.971285 14.968048 9.622824 10.586064 13.369663 14.467281 8.805893 10.908268 12.919748 11.890400 10.651836 8.048576 2.933629 7.827517 12.749570 11.441275 6.027610 9.038937 9.440817 9.593491 11.616118 5.310009 5.320654 12.258592 7.011270 -1.766603 3.555117 9.264384 10.706138 10.103172 7.803049 8.781051 12.627455 4.066081 11.770751 9.552300 10.005095 9.956854 12.057555 10.059344 11.189751 9.810622 NA 8.724685 4.014552 10.332869 5.442645 11.435623 10.714235 7.109709 12.567396 10.090007 9.589095 11.977922 10.633539 10.702580 2.233182 TCGA-AQ-A04J 45 0 NA 819 breast stage iia t2 n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 4.161568e-07 10.08270472 9.80105791 11.58423618 9.77881850 8.63305625 9.37278694 9.57780985 11.04895850 11.03702366 13.10277784 11.22511294 11.15957356 1.51409700 11.78376144 2.66612030 9.70941902 7.83203047 10.22721533 10.05628736 7.86579079 NA 9.75570129 7.80362163 9.20450121 11.01152359 6.65252952 1.66612030 10.48946968 10.53339710 2.51412226 9.19359534 7.61798604 -0.65585325 6.33854386 10.11938899 10.38173717 9.41498199 10.23407446 9.76835654 11.02279036 5.42100444 8.62959231 15.41240171 8.47400116 8.70941920 11.11794765 10.85198487 5.12555192 0.66612030 9.29109655 12.25894909 -0.07081499 10.14225694 6.27492694 7.72356880 4.97354699 9.54508880 12.04083183 10.34911290 11.56502199 13.08744685 7.86382635 12.00808184 10.56226905 11.46717996 11.65522896 4.59211613 11.94363824 8.96715708 2.98804840 10.26417081 9.73543383 4.70525914 7.69291813 11.74666942 10.65423494 10.62293008 9.83904581 5.63881238 9.83554232 12.55120458 12.33118772 10.37140509 9.51786738 5.1868e-03 4.1352e-01 3.5322e-01 5.7420e-02 2.1234e-02 3.7808e-02 3.3601e-02 5.0444e-02 4.7570e-01 4.6309e-03 4.6309e-03 3.0751e-01 5.0772e-05 -4.0093e-01 1.4503e+00 3.1629e-02 3.1629e-02 4.0000e-01 -4.3275e-01 6.2740e-01 1.6076e-03 -1.3437e-02 -3.9837e-01 -3.9837e-01 4.5111e-01 7.8293e-03 7.8293e-03 7.8293e-03 -1.0765e-01 -3.8253e-01 5.1868e-03 -3.9782e-01 -4.0192e-01 -4.4595e-01 -8.3861e-02 -4.3492e-01 -4.3481e-01 5.0444e-02 4.7570e-01 -6.3162e-03 -2.5087e-01 -4.4163e-01 -5.8143e-02 3.9801e-01 -4.5189e-03 -4.5189e-03 -3.8141e-01 -6.6185e-01 -3.2770e-01 -1.9470e-01 -1.4011e-01 -4.0959e-01 -4.0959e-01 3.8276e-01 -4.3275e-01 -4.0325e-01 -8.0564e-01 -4.0297e-01 -4.3492e-01 1.0754e-02 -3.9837e-01 -3.9837e-01 -4.9576e-01 -3.6914e-01 7.8293e-03 -1.0765e-01 1.6337e-02 3.6422e-02 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.130460 12.871423 4.666120 9.481181 6.592118 11.194768 6.787133 7.603933 8.896859 10.007304 4.473475 8.963411 6.596856 10.401844 9.456630 3.701738 9.964868 10.485339 7.780902 9.516618 8.578792 8.107403 12.618714 3.736507 8.442222 10.028501 4.666120 NA 11.063365 1.803640 12.754509 11.997595 9.072111 9.989849 9.349815 9.644543 3.099076 2.988048 1.344204 4.610978 8.708325 9.349113 6.606285 7.330032 8.620384 4.944104 9.841044 6.404886 10.850994 2.431650 12.464347 3.629590 6.138606 9.045531 5.507386 8.037677 10.121034 8.988948 8.469604 6.606285 13.374469 2.044639 10.852728 -1.655626 8.553644 7.099077 7.945961 7.977185 11.138606 8.165964 8.476047 11.783761 11.349129 10.798747 7.865791 10.236354 9.455326 11.712969 13.724212 11.629159 9.291097 7.372096 2.151534 8.266031 10.621478 10.768881 5.553643 9.069548 8.685153 6.753582 9.677681 8.663862 7.688486 11.225113 9.676227 4.898779 7.347006 9.326200 13.155715 10.978548 7.973547 8.882379 10.631037 8.305640 11.126122 9.414982 10.557902 9.774120 11.917246 10.044630 10.527826 9.102414 -1.655626 9.681310 9.637662 10.142257 8.000615 10.325044 9.545089 8.081218 14.339737 9.624381 10.194768 12.730187 10.350867 9.099912 1.666120 TCGA-AQ-A04L 48 0 NA 3957 breast stage iia t2 n0 (i-) mx female 2001 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 4 2 2 4 2 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 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9.5727957 0.41462000 0.14348000 0.15876000 -0.38347000 0.44409000 2.78290000 -0.37471000 -0.82097000 0.11917000 0.03919500 0.85964000 1.07230000 0.35643000 3.65690000 0.40327000 1.40060000 1.15530000 0.01377200 -0.08837400 -0.34308000 0.06995600 0.22715000 -0.44027000 -0.44027000 0.00097064 -0.04265200 -0.41519000 -0.43322000 1.03310000 0.29024000 0.43024000 0.02505700 -0.36324000 -0.83519000 0.18192000 -0.31145000 -0.76698000 0.03199900 -0.75305000 -0.32861000 -0.38728000 -0.34779000 -1.26330000 -0.50169000 -0.45875000 0.77425000 0.26687000 0.00000000 -0.43018000 0.34209000 0.33674000 0.05551500 0.05551500 0.06995600 -0.24009000 -0.24009000 -0.76552000 -0.37932000 0.22715000 -0.00609040 -0.44027000 -0.44027000 -0.35909000 -0.46515000 -0.82301000 -0.01725400 -0.36318000 0.31225000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.965 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.375 -0.767 0.000 0.000 0.000 0.000 -0.404 0.860 -0.550 -0.550 0.000 0.000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.965 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.375 -0.767 0.000 0.000 0.000 0.000 -0.404 0.860 -0.550 -0.550 0.000 0.000 8.2687703 13.3536142 4.1180523 8.8316467 3.0476605 10.3298282 0.3106891 NA 9.2434077 9.0733597 NA 7.4839617 3.4806270 10.9327527 9.2600412 2.5330898 4.9736664 9.1902840 8.7850830 11.2493003 8.8564632 6.8237710 10.9671257 2.5330898 8.5234000 9.5483093 7.4330972 NA 9.9533543 1.7257412 14.1344330 13.0766085 8.2115676 9.2125735 7.7341670 10.1324748 6.1769490 2.8131963 NA 3.9351957 8.9254108 8.8342628 9.7660281 2.0476780 7.6876507 9.4459826 9.7945166 7.4016953 9.2716682 NA 10.7601934 1.5331148 4.9351910 9.6764328 6.1863163 -0.2742152 8.4604481 6.3256509 1.0476780 3.1180607 15.1354276 1.0476780 10.9816521 NA 10.1110616 5.3404483 7.8132014 7.4052181 13.172788 5.679933 11.396395 12.923032 10.169423 11.302459 13.016333 12.035641 9.660048 10.268287 12.426178 9.817835 8.327509 6.742547 NA 7.728553 11.756750 10.7982059 6.8498592 9.8277141 9.0408878 7.3550947 10.4679424 5.2803254 4.3981656 10.7519159 8.6667861 0.3106891 6.5837191 7.4921015 10.0672571 10.1856822 8.0226547 9.8401313 7.8342631 3.2492936 11.5774366 9.1707531 9.7087320 10.6367557 10.6121970 9.5883757 10.7411534 8.2195940 11.3890740 9.5373860 2.6326405 10.5864374 7.9473254 11.5489065 9.5355065 7.0655885 15.1211553 11.5665163 10.8649699 12.6289612 10.1499046 9.6929647 1.0476780 TCGA-AQ-A0Y5 70 1 172 NA breast stage iiia t2 n2a mx female 2010 NA no infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 2 NA NA 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 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0.02034300 -0.36567000 0.14607000 0.30665000 0.30665000 -0.38750000 -0.38750000 0.36690000 0.63499000 -0.04346600 -0.09353500 -0.01606900 -0.03121300 0.29931000 0.29931000 0.00889190 0.21899000 -0.00926670 -0.39375000 3.65690000 1.15230000 -0.37076000 -0.37561000 -0.32251000 3.65690000 -0.37279000 -0.37279000 -0.35133000 0.01586600 -0.36567000 -0.35088000 0.14607000 0.14801000 0.30665000 0.30665000 0.30665000 0.01964300 0.01335300 -0.37707000 -0.22490000 -0.22490000 -0.22490000 -0.39778000 -0.04346600 -0.10552000 -0.09379900 -0.01606900 -0.38662000 -0.00360120 0.29931000 0.29931000 0.29931000 0.00889190 -0.16434000 3.54430000 -0.00041589 -0.39286000 -0.37448000 -0.38381000 -0.75926000 -0.75547000 -0.02752700 -0.18898000 0.22314000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.307 0.307 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 0.000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.307 0.307 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 0.000 8.63478782 13.66521486 8.21032359 9.50412279 2.49779117 11.27134805 -1.50225991 -1.50225991 7.75989151 9.77275713 -1.50225991 8.75705759 1.95724601 10.58823997 9.37431356 1.81970905 7.83987143 9.46213762 10.20731137 10.19432965 8.86501499 7.04082888 11.59154437 0.08270259 8.33542475 9.64754387 1.08277070 0.08270259 13.54756020 0.81974992 12.49294555 12.03124813 8.35733162 11.51512713 8.17903525 8.53945585 6.63222313 5.46357995 0.49784226 2.40468518 7.90293821 9.65577524 9.96387318 4.05238981 8.33485695 7.43737590 9.89547137 6.74097072 9.06003900 NA 10.14075093 3.85535190 5.09770770 9.69023741 4.08516118 0.49784226 8.45199284 8.40468730 10.33503042 2.40468518 14.24436352 1.49779117 10.69961435 NA 8.11434568 4.52016449 8.67521609 9.37584768 12.994287 5.553078 8.879340 17.028112 10.148848 11.410499 12.514518 10.763119 8.996646 11.189976 13.264015 9.137137 9.103276 8.274230 -1.502260 8.430011 12.906525 10.8245071 7.7048111 8.5799457 9.5705992 7.6475441 9.7667480 5.1271545 6.5958289 10.6238558 6.4285344 -1.5022599 5.7551840 6.3575802 12.3675833 10.0442089 8.2188959 8.4432407 10.5350004 2.1982427 11.5893379 10.1216782 9.8564479 9.4054385 11.6259522 10.0065819 10.1092827 9.3346360 1.4977912 8.6477343 1.4977912 11.6780167 9.9541511 9.7637985 10.8191611 6.3986633 13.6645090 9.9876446 10.1244184 12.9939639 9.5469647 9.0667027 0.4978423 TCGA-AQ-A1H2 84 0 NA 475 breast stage iiia t2 n2a mx female 2010 NA yes infiltrating ductal carcinoma 13 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 1 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 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-4.1585e-04 -4.1585e-04 0.0000e+00 -3.5721e-02 -3.8145e-02 5.4233e-02 5.9937e-02 -6.2286e-03 -8.7821e-01 -8.6617e-01 -8.6617e-01 8.5245e-01 9.4491e-03 9.4491e-03 8.0383e-01 6.9858e-01 1.8761e+00 -4.2409e-02 9.5883e-03 -8.6586e-01 1.3868e-03 -3.8986e-02 -6.2023e-02 -6.2023e-02 -6.2023e-02 -8.3997e-02 -8.3997e-02 -9.2345e-02 7.8003e-01 -9.2047e-01 -4.1585e-04 7.6392e-03 -3.5721e-02 3.2516e-02 2.4829e-02 5.9937e-02 5.9937e-02 -8.9626e-01 -8.3810e-01 6.9956e-02 7.4442e-01 -8.5114e-01 -8.6617e-01 -3.3802e-01 -1.2929e+00 -4.0130e-01 -4.0130e-01 9.4491e-03 9.4491e-03 -8.6696e-01 -1.3083e-01 -8.7829e-01 -8.7135e-01 9.5883e-03 9.5883e-03 9.5883e-03 -8.3978e-01 1.3868e-03 7.4085e-06 -8.6900e-01 -6.2023e-02 -6.2023e-02 -8.5094e-01 -8.3997e-02 -9.2345e-02 7.8003e-01 5.1359e-03 -7.4010e-02 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.029 0.838 -0.401 -0.401 -0.198 -0.198 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.029 0.838 -0.401 -0.401 -0.198 -0.198 7.6049712 12.2988173 8.0671046 9.8426861 2.6598332 10.5388747 0.5900510 NA 7.2904603 9.1116214 NA 5.4807918 6.5711125 10.6153911 9.2817643 4.1948829 7.1924102 9.3382136 12.0697169 11.6026453 8.6168300 7.3757458 9.4797782 3.7599441 8.7372257 9.9719242 2.3269975 NA 10.4425503 -0.9948156 12.0270793 11.3605470 6.3930764 9.8815753 11.0913604 9.8031250 4.0050586 -0.9948156 NA 2.9592508 9.0885376 8.6234437 10.7022431 -0.9948156 8.3633358 7.7193039 10.5911944 6.5787048 10.1165201 NA 11.7449443 0.8123750 5.4644886 8.8801394 6.2219003 2.0050406 9.9581635 7.1998156 5.9357945 -1.9948156 14.0152148 -0.9948156 10.4644899 NA 7.4583287 6.1291800 7.9951623 9.4202719 14.1009633 3.7329746 8.5383880 13.2043472 9.5577273 10.9821593 13.6580713 11.5454286 11.2856957 10.6998514 13.0683691 7.6160834 8.7847778 8.1484415 0.3269975 7.8316068 10.7816969 10.5567666 8.2230161 8.7790216 9.0474018 7.3822687 9.4834033 6.1135817 2.6489256 11.6586871 4.3269831 1.8124161 3.8124161 6.1286625 7.8754232 10.3292389 9.7909194 8.0162857 10.8067666 2.4644853 12.4700832 11.3906511 10.6941827 10.2633299 11.5496606 8.5644353 9.9617974 7.8489790 0.3269975 8.1150978 1.3269975 11.2906050 5.6271107 10.2615618 9.7624483 7.1420499 14.0040894 10.1086739 9.7831354 12.7097185 9.4696040 9.3554449 NA TCGA-AQ-A1H3 49 0 NA 989 breast stage iiic t2 n3a mx female 2010 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 4 4 3 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.121176e-07 10.9827598 10.0392204 12.1690306 10.1348030 8.7878281 9.2918354 10.4817748 9.1629557 9.8351042 12.4980926 10.6001438 10.6799972 1.8662354 13.8862610 6.5794034 9.4529115 7.6252076 8.4649843 8.7526161 12.9358206 1.3357119 14.2823842 2.3357119 9.1640001 11.0594570 6.9372655 -0.2493078 7.8800218 9.1097562 2.7507351 9.2332105 8.0081266 -1.8344417 5.0605922 10.3272231 11.2705388 10.7848498 11.1268642 10.5559452 12.2393321 5.7126701 11.4446612 14.6807984 8.9479963 9.6231365 11.5824418 12.1475219 5.1544617 4.9471378 9.1257782 12.1728911 -1.8344417 11.1299366 5.3556013 6.3306839 4.7049328 10.7649917 11.6705952 10.5735751 12.9672825 13.0969293 7.2074351 11.2963468 11.0622354 11.8777658 11.6153118 5.2318663 11.9395336 11.2239371 -1.8344417 10.3691242 9.6480800 2.9481897 5.7878268 10.3142529 10.0484193 10.6277672 10.5172676 3.1199703 10.6505992 13.4272835 11.9505133 10.3797917 9.6981322 -0.00097017 1.13230000 1.13230000 0.00847430 0.00847430 -0.00830050 -0.01064600 -0.00981850 -0.60584000 0.56872000 0.56872000 0.56774000 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00636680 -0.00124730 0.00277450 0.39147000 0.39147000 0.39147000 0.00055459 0.00055459 -0.00223460 0.00110930 -0.00097017 -0.00097017 0.00000000 0.00847430 0.00458000 -0.00636680 -0.01064600 -0.01064600 -0.00981850 -0.60584000 -0.00476410 0.57592000 0.57077000 0.56872000 -0.00258990 -0.00258990 -0.00258990 0.01209700 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00567570 -0.00636680 -0.00124730 0.00277450 -0.62218000 -0.47120000 0.39147000 0.00875280 -0.01023200 -0.00223460 0.00110930 0.00374650 0.01628600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 0.000 9.4337334 12.9311659 7.3431955 9.5017247 3.8589856 11.3156821 2.6893439 0.7507780 8.8078279 8.3885710 NA 8.9482749 4.6252062 10.1759547 9.2782157 3.2532329 9.8791628 9.5293634 10.1265022 10.1452014 9.8251879 7.6374516 11.2222446 2.9731337 10.2908668 9.8060211 4.7203660 NA 10.0503284 2.5580962 12.8066425 11.9393276 8.4430637 10.3966974 9.2081197 9.0089121 3.8936923 1.6252237 -0.8341845 6.8024013 8.0831485 7.8382017 9.7160421 6.2372386 7.7237954 5.3556013 10.0322824 7.4831886 9.8949720 -1.8344417 10.4471267 3.3752341 4.5056242 10.3577545 5.3955564 5.5233267 9.5260747 8.1373196 6.1881437 -1.8344417 13.6290132 0.7507780 9.8709767 NA 9.4296323 6.0112653 7.8936965 8.3117084 13.5959298 5.2101706 8.7497991 13.8862610 10.1871032 10.7551933 12.9358206 12.4235324 9.5100722 11.1517960 13.7007782 10.4944512 9.1257782 8.4430637 0.9731337 7.9223323 11.9113455 11.282283 7.831112 9.177702 9.133002 9.599883 10.228625 6.604568 8.411329 10.600144 5.704936 4.750740 8.877443 6.968518 12.612924 10.661381 9.611826 7.679504 12.507990 6.558093 10.357933 10.784850 10.232874 9.937678 11.732068 10.166128 11.025699 9.592041 2.558096 9.322744 6.816828 11.129937 8.417258 10.880756 10.764992 7.258586 13.773858 9.852714 10.340702 14.002049 10.339453 9.863613 3.809631 TCGA-AQ-A54N 51 0 NA 78 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american hispanic or latino NA NA 4 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.733986e-06 3.467973e-07 8.8392035 7.8605768 10.6824073 5.4735532 8.2127371 8.5753074 9.0342688 9.8456487 11.7200205 11.9893750 10.6624661 9.6410107 1.0361165 11.5162656 1.0361165 10.8348904 7.5118823 10.6490171 10.5132322 5.3338280 NA 10.4412901 9.9218450 11.5419602 10.3759986 2.9106175 NA 8.1341809 10.5544739 -0.5487757 7.5010346 4.9430399 6.5172757 3.3580727 8.6557572 10.4313256 8.8774507 10.1782556 8.9550120 10.4162488 3.3580727 1.4511715 15.0813963 4.8161081 9.1977005 8.7062145 9.1585453 6.4846086 2.0361516 8.0361483 8.7179728 NA 12.8777129 1.0361165 4.7365886 5.4053832 7.9106175 11.9577416 10.5655792 10.3929673 12.1899117 9.1516257 10.8637560 10.1943375 9.5945693 10.0380259 2.4511979 11.4266759 9.9786631 5.2060727 10.6434789 8.9884046 3.8462526 -0.5487757 9.3745135 9.1671481 9.7073949 8.8795462 NA 6.3460030 12.2765424 11.4578628 10.5907375 10.7150421 1.1145000 3.3461000 2.2304000 -0.6044800 0.6166100 0.0325630 0.7222500 -0.6078600 -0.6101100 0.6616100 0.6390500 3.5485000 0.6640100 1.7974000 -0.5789100 -0.5772300 0.0607940 1.0887000 0.0481200 -0.6039000 -0.5977000 -0.5900500 -0.5570700 -0.5688300 -0.0316950 3.6569000 0.7064500 0.6764100 0.0959440 0.1084800 0.0450890 -0.1904900 -0.6044800 0.7560500 0.0269980 -0.6388700 -0.6357600 -0.6084400 -0.6101100 -0.6116200 -0.6137400 -0.0022168 0.0545180 0.6725200 0.6623500 -0.5929200 -0.5694200 1.1514000 0.6419400 -0.5845100 -0.5360200 -0.5702100 -0.5693200 1.0674000 0.0437230 0.0561850 -0.5920500 -0.6015800 -0.5951700 -0.5728900 -0.5802200 -0.5688300 0.1219600 -0.5942900 0.6730700 -0.5700200 0.0751280 -0.5762500 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.030 -0.611 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.267 -0.475 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.030 -0.611 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.267 -0.475 7.4901048 10.9470411 5.4284674 9.5333352 NA 11.6815068 1.0361165 1.7731102 9.5320036 10.5326696 8.8753525 9.4327534 7.1236114 10.1892784 9.8732509 3.4511847 3.0361516 8.0548127 8.2358209 10.1147442 8.9870835 6.1791069 10.6366810 1.8489984 9.0361486 10.8327290 1.0361165 NA 10.0520282 4.1516234 13.4391606 12.5782132 4.6211083 8.3759986 9.3338291 10.9450416 5.1791049 NA -0.5487757 NA 8.8175085 10.0575913 6.5064687 1.0361165 11.0304455 9.0267254 10.7406287 4.0361516 9.7526824 3.6211141 10.6041047 NA 2.6211024 10.0863237 7.7097993 1.7731102 5.6211112 4.8435015 5.3580762 7.9390261 15.1438016 NA 10.7319569 NA 9.6459430 7.6848061 9.1040310 6.1093982 12.309336 9.318465 8.663075 11.516266 10.095944 11.761799 5.333828 7.021042 9.777616 10.077808 14.828736 11.782943 8.036148 8.593293 3.843502 7.626112 8.503754 10.294322 6.407011 8.161992 10.626736 7.232546 8.692430 5.284077 6.680005 10.662466 11.768881 5.179105 9.321551 7.980812 12.031680 10.060365 7.302935 9.175700 NA 2.036152 13.267584 8.877451 9.885814 10.196860 11.497287 10.719143 10.289602 5.151627 NA 9.113730 4.660638 12.877713 NA 10.559711 7.910618 7.528002 15.464334 10.505790 9.720313 11.412998 11.863756 9.051099 3.258534 TCGA-AQ-A54O 51 0 NA 1001 breast stage iia t2 n0 m0 male 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 3 NA NA 1 1 3 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.427581e-07 9.0965070 8.1580295 10.0168793 3.3195312 9.0654800 8.5632287 9.3614890 10.3263971 9.7251399 13.8072540 10.6479512 10.5071526 1.7345687 12.3802215 NA 10.2639937 7.1211439 8.5758652 10.0542353 12.2043745 NA 14.4696255 2.7345687 10.6241684 10.7199307 7.1153850 1.1495846 8.3443576 10.0617415 2.4715257 6.7789576 6.5419175 NA NA 7.8707001 9.6682537 10.0781190 9.9585647 8.7970590 10.1781974 0.7345687 10.4004912 13.4334848 5.8494864 9.1566279 9.1037969 9.5547421 5.3784180 6.5246404 7.3927742 10.0130126 NA 9.9334174 2.6090221 5.4163871 1.9569488 9.5246400 11.4519539 9.9044882 11.2337446 11.5579303 9.5536777 10.0906482 9.4152157 10.0935805 9.3044186 2.0449186 10.9521169 9.8664201 NA 10.5992652 8.4602134 2.6090221 1.4715517 10.9681828 9.2502629 10.5268111 10.0044689 1.9569488 8.1802677 12.5948742 9.8681334 10.0466897 9.6293808 -0.097759 1.008200 1.012000 0.523800 0.575230 0.282320 0.358570 -0.809720 -0.856070 1.139500 1.139500 1.163500 0.249900 -0.393860 -0.017391 0.827840 0.355940 -0.250920 0.273630 -0.137810 -0.165230 -0.157200 -0.184330 -0.184330 0.740240 0.178840 0.396810 0.447820 1.891200 -0.189950 -0.097759 -0.180850 0.523800 0.270320 0.284380 0.151730 0.000000 -0.809720 -0.809720 -0.856070 0.528360 0.531340 -0.155280 -0.813840 -0.176130 -0.176130 -0.176130 -0.393860 -0.393860 -0.017391 0.291040 -0.692150 -0.700640 -0.250920 0.271590 0.271590 -0.137810 -0.165230 -0.157710 0.506370 -0.184330 -0.184330 -0.149260 0.156500 0.447820 0.515420 -0.316220 -0.185460 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.270 0.270 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.163 -0.176 -0.176 0.000 0.000 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.270 0.270 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.163 -0.176 -0.176 0.000 0.000 8.1382851 11.5123664 6.5333048 9.3891992 0.7345687 10.1912597 2.4715257 NA 9.0729282 7.5842289 NA 5.3784180 3.6090339 10.1333068 9.3832202 4.3195240 8.8826158 8.4692727 8.6672698 12.8201462 9.3808219 6.8638456 8.6172063 NA 10.2163626 9.9317798 3.3195312 NA 11.1895478 2.8500393 12.2285853 12.0786740 6.6964947 8.6790310 9.0684639 10.7725675 3.0564968 0.7345687 NA 7.6374407 10.4849909 11.5013680 9.2555090 0.1496496 10.3626015 8.9793234 10.3790202 2.7345687 9.7345631 NA 11.3693742 NA 3.7345579 10.5240587 7.9810980 3.2370589 7.1885196 5.2788843 6.2048821 2.1495846 14.1073828 0.1496496 11.7893935 NA 7.4069881 4.3195240 8.5504802 8.5987493 12.4781690 6.7862252 9.7679861 12.3802215 10.2177071 11.2788836 12.2043745 11.1957014 8.9044880 9.1733548 12.2581251 8.7420578 7.3927742 8.7364405 0.1496496 7.0744134 11.3838193 10.200809 6.319526 8.399899 8.416387 7.289152 8.817776 6.850041 9.153821 10.647951 8.339425 4.764309 6.541917 7.514873 8.346817 10.344357 8.721353 10.735502 6.911152 4.237067 12.804364 10.078119 10.562170 10.670710 9.909489 7.877521 10.138995 4.193992 NA 9.017914 4.673161 9.933417 7.278883 10.949287 9.524640 6.625333 13.419166 10.193995 9.152416 11.575865 10.574292 9.121144 1.956949 TCGA-AQ-A7U7 55 1 584 304 breast stage iiia t2 n2a m0 female 2013 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6542806 9.6867642 11.3849416 9.4893272 8.4664207 10.0310706 9.8549416 10.2355104 10.1152364 9.1567809 11.1088748 10.4763387 0.2279875 11.9174315 2.8909719 9.6812866 6.4948028 9.1802717 8.7023978 11.8291676 1.9649900 12.9417603 7.0310709 9.9046194 9.5566907 9.2373780 NA 13.3183268 9.9022081 2.2280183 9.1288826 7.6430531 -1.3569750 6.1428994 10.0278370 9.8814581 9.8500677 10.9313427 9.4861892 11.2012348 2.2280183 9.5745296 15.0313566 8.3415148 10.2669348 11.2651051 10.8604053 5.8814591 4.5737926 8.7877116 11.6244422 -1.3569750 10.6303174 6.3012657 8.3760685 5.2577650 10.2563824 11.7018907 10.4536250 12.4387887 13.0421977 8.5559427 10.8718721 10.7717373 11.2662490 11.4747564 5.3434931 11.1291342 11.0148300 -0.3569750 10.4865818 9.0682693 5.6688566 7.1587531 10.5298931 9.8537247 10.4723797 9.7966054 3.8525083 9.2392431 13.2554035 13.1082371 10.0017046 10.0299936 -0.28564000 0.53571000 0.56005000 0.01101500 0.01219800 -0.01178700 0.01024600 0.55686000 -0.28326000 0.00773970 0.00773970 0.00773970 0.28520000 -0.28616000 -0.00100860 -0.00100860 -0.00100860 0.00120960 0.00820070 -0.28556000 0.02563200 -0.00792460 -0.01825400 -0.01825400 -0.01825400 -0.03003200 -0.03003200 -0.03003200 0.28782000 -0.01797900 -0.28730000 0.00718310 0.01101500 -0.01178700 -0.01178700 0.01024600 0.09285500 0.56005000 -0.28326000 -0.29063000 0.00481940 0.00481940 0.00143410 -0.00183980 -0.00183980 -0.00183980 -0.00183980 -0.28159000 -0.29441000 -0.01316500 -0.00100860 -0.00100860 -0.00100860 0.00120960 0.00093216 0.00093216 -0.28338000 -0.26615000 -0.00792460 -0.30502000 -0.01825400 -0.01825400 0.00565330 -0.03003200 -0.03003200 0.28782000 -0.27658000 -0.31100000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.8214070 13.4784623 7.8957189 10.9613137 6.5559434 11.4769317 7.0651177 -1.3569750 8.8341126 8.2632730 -0.3569750 7.8451770 3.7305204 9.6619489 10.0481948 2.7305095 10.4967527 9.2429661 10.0865150 8.8933519 9.8064641 8.5619164 11.4289145 5.0353688 7.9215030 10.3870463 3.7723396 -1.3569750 11.2837502 3.9649808 12.6166610 12.0562846 8.6088377 9.6066719 11.5585593 9.0891027 4.0693155 2.1024902 -0.3569750 5.7723370 8.9027966 9.9376741 9.5325574 5.3434931 8.4404556 6.4568341 10.0963239 5.7723370 9.3650070 NA 11.6518321 5.6203342 6.1349068 8.9627029 6.8659930 9.4219518 10.7331658 9.6867642 9.9226639 0.6430250 13.1635493 1.2279875 10.4415252 0.2279875 8.7774796 6.6317387 7.5226365 8.5025880 12.149574 5.370973 8.252232 11.917431 10.264189 10.357299 11.829168 11.815481 9.063972 10.957920 13.556551 10.968640 8.787712 8.439093 1.227987 7.350412 11.269219 11.3341425 6.2280163 8.3811458 8.7010451 7.9168492 10.4737706 9.9474046 8.4979217 11.1088748 8.0202638 1.2279875 5.1349068 8.2318053 11.0651181 11.4574355 7.2869098 9.3278019 11.5831834 10.4350301 12.8441335 9.8500677 10.4873669 9.7619944 10.5195703 11.2923096 10.6335119 8.9168489 0.9649531 10.1894945 10.1443930 10.6303174 7.4079246 11.2362950 10.2563824 7.4916760 13.1215702 9.4608365 10.2429661 12.9318473 11.2207182 9.9962002 4.8525083 TCGA-AR-A0TP 43 0 NA 4275 breast stage iia t2 n0 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2673020 9.3632164 11.6838750 9.6763937 8.4486718 8.4531500 9.1220641 10.7290436 12.0700481 13.4051330 10.5963328 10.7247287 0.5342609 11.5002513 3.9937196 9.3156464 6.4108041 8.4590992 11.0248869 6.8196886 1.1192234 3.3416442 9.8668828 9.3284914 10.7600966 5.1041437 1.1192234 7.8539589 10.7622034 1.8562288 7.9605517 7.9563512 NA 3.4411780 9.3703369 9.6480289 8.4884829 10.2958379 9.6616361 12.2968764 -1.4655399 8.0850337 16.3478675 7.7411548 9.7110832 10.4203643 9.6070893 2.7822198 1.8562288 9.4701883 10.8522645 0.5342609 10.8374967 3.4884893 4.3156459 4.9937196 8.1471551 11.8647835 8.9114972 12.0501097 12.7927791 9.3400306 11.3973114 11.5460538 11.8925258 12.1267437 4.9436776 12.2919892 11.6085954 0.8562288 10.0430719 10.1794948 3.8583789 3.3416442 10.7576851 10.3303262 10.5997028 10.2732234 7.5759461 9.1499163 12.9013601 11.9924369 9.9793016 10.2528195 -0.0952520 1.3919000 1.5176000 -0.9055500 0.7394800 -0.8958800 0.8705000 0.9081500 -0.9424000 -0.9645200 -0.9645200 1.8592000 0.0084743 0.0084743 -0.9351900 0.0127950 0.0127950 -0.0018014 0.8390300 0.8972800 -0.8949400 1.6268000 -0.9069200 -0.9166500 -0.2822700 0.7400500 0.0359070 -0.0522610 -0.0150540 -0.0231550 -1.2929000 -1.0537000 -0.9055500 -0.9873800 -0.1296900 -0.9186000 -0.9149200 0.9081500 0.0126550 -0.9820000 -0.0109220 1.5468000 -0.9645200 0.1345000 0.1300700 -0.8888100 -1.0008000 0.0084743 0.0084743 -0.9841400 0.0127950 0.0352420 0.0352420 -0.0018014 -0.0070576 -0.0183530 -0.9076800 -0.8747100 -0.0951200 0.0237060 -0.9069200 -0.9015300 -0.9206200 -0.9429800 -0.0522610 0.7543300 0.0800240 -0.1563100 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.932 1.074 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.932 1.074 0.000 0.000 0.000 0.000 6.0656671 13.8697817 2.9937106 10.8929379 NA 12.9150183 NA 6.9308911 8.6712778 8.8685599 7.0965286 9.4854184 9.3400306 10.4449295 9.3197392 4.0888794 6.2416457 11.7221027 9.1969552 9.1924982 8.4781495 8.0018923 11.7394690 NA 8.7437401 10.2111253 3.7042080 NA 9.3789925 2.2347159 13.4987629 12.9883932 7.6057491 9.8133169 6.3156459 9.2774381 5.3797769 3.0578488 -0.4657391 NA 7.8652037 9.8369257 6.2553855 4.7437411 10.7577062 7.4260701 9.1781429 8.3480677 11.0074850 3.6217471 13.3501703 1.9937106 5.7042108 10.0105316 6.5794457 NA 8.4366620 6.4351535 -0.4657391 7.1599954 13.8888460 -0.4657391 11.1102986 NA 9.1690977 8.3287027 8.1599954 7.8607164 9.412384 7.619095 7.441177 11.500251 10.008500 11.529701 6.819689 13.354865 9.293343 11.081422 12.731964 10.791085 9.470188 8.416930 4.441178 7.716681 10.880246 10.239919 6.567710 8.470925 8.989614 4.315646 9.774374 3.341644 4.148999 10.596333 10.456871 2.993711 9.211125 9.396645 13.907764 9.743740 7.828908 8.305776 9.443430 1.704208 11.039317 8.488483 9.467240 9.893487 11.568914 10.139303 10.247673 9.615770 NA 9.248833 2.704208 10.837497 8.192498 9.243629 8.147155 8.024135 14.237217 10.219473 10.921227 11.427209 10.050972 8.423030 1.119223 TCGA-AR-A0TQ 27 0 NA 2991 breast stage iiia t3 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 1 1 1 1 6 1 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2239409 9.8575929 12.0802589 9.6879871 9.2429628 8.3240486 10.6090402 10.2960585 9.7566887 14.5881447 11.4682846 11.0684489 3.0847276 16.6665201 2.7743759 9.0101065 5.7378544 8.4603195 9.0001172 12.6730716 0.9378717 14.6793302 2.7154761 10.1176701 11.0721212 8.6393085 3.4159209 10.1359584 10.5716520 2.3784561 6.8787168 6.7994086 0.4524900 4.8719915 9.9131122 10.3914430 9.8745162 10.1045794 9.6248790 11.3525635 2.3784561 10.8439099 15.3793497 8.6364539 9.9069399 11.8999480 11.4372971 3.6851104 3.4524505 8.9507023 10.5614986 NA 10.7896273 6.1020660 6.5567881 5.3973101 10.6879871 11.7451182 9.3472692 11.3298890 12.8669253 7.4251437 10.7084242 10.6162822 11.0925156 11.1560090 4.8854133 11.3306557 9.5567881 0.1305356 9.4990299 9.1563552 3.3496908 6.4748189 11.3997962 10.2594844 10.9995388 10.3411947 1.5899552 5.2285571 12.0107765 11.7357714 10.1448926 9.1417506 -0.23202000 0.18980000 -0.25575000 0.00444740 0.01600600 0.01712400 -0.00097017 -0.15464000 -0.15464000 -0.04563500 -0.04563500 0.45564000 -0.00747200 -0.00747200 -0.01587900 -0.05068600 -0.01188700 0.22283000 0.22283000 -0.00448500 1.23010000 -0.01821600 0.17724000 3.65690000 3.65690000 -0.29154000 0.17211000 0.14480000 3.65690000 -0.26979000 -0.23202000 0.00861350 0.00444740 0.01712400 -0.00487380 -0.00097017 -0.00097017 -0.15464000 -0.15464000 -0.15464000 0.00000000 0.00000000 -0.04563500 -0.50826000 -0.46600000 0.01810300 0.01810300 -0.00747200 -0.00747200 -0.01587900 -0.01587900 -0.01188700 -0.01188700 0.22283000 0.22283000 0.22283000 0.00138680 -0.02110300 -0.01821600 -0.02996600 0.17724000 -0.29733000 -0.00940460 -0.29154000 0.17211000 0.20274000 -0.01958900 -0.04955900 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 0.000 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 0.000 8.9634134 13.1323274 7.3949659 9.3802294 5.0007662 11.7208765 5.1528892 0.7154541 8.8091234 6.5899552 -1.8693327 7.2422586 2.2179751 10.7060626 9.2285554 3.6851104 9.6178610 9.6937197 12.3105102 11.5408422 9.8217652 8.3399769 10.6027065 2.8309651 8.5796719 9.8799739 4.9249407 -1.8693327 11.1282321 1.9378717 12.0128799 12.3166376 7.0671611 9.8669253 10.3243567 10.1912193 6.7598802 2.5228342 1.1305356 4.3784492 8.7173632 9.8417601 10.1113770 4.4703742 6.5655682 7.4725982 10.9538906 6.1305232 10.3943794 -0.2845459 9.7364659 4.7887327 6.2179868 9.1414080 6.0411970 6.3104328 8.8318298 9.1563552 9.5351328 0.4524900 13.2029491 2.5228342 10.8609935 NA 8.9427007 4.9378764 7.5609763 8.4274394 13.505152 6.320347 8.037414 16.666520 10.296373 9.753948 12.673072 12.849805 8.907581 11.035534 12.701624 11.516521 8.950702 7.626379 3.130519 9.665313 12.553245 11.0710205 6.9216862 8.4580760 9.0590418 9.4199659 10.5065212 7.5837943 9.6817509 11.4682846 4.8447673 -1.8693327 4.9378764 9.1925088 11.8798691 10.4891746 9.0818080 9.4620002 9.8563156 7.2285551 11.7092463 9.8745162 9.7730264 10.0876254 11.2031584 9.6278762 10.6417818 9.4957521 -0.2845459 9.9261815 7.7851595 10.7896273 5.5899552 10.5025722 10.6879871 7.6104454 12.8273822 10.2126724 10.2862903 11.5986383 10.3653408 9.5729486 1.8309449 TCGA-AR-A0TR 68 1 160 NA breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 5 5 3 3 3 1 1 1 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1220664 10.2320767 12.4610667 10.5188552 8.4553630 9.4893892 11.6006196 10.1385060 7.5172340 14.7587723 10.8016931 11.4460198 1.1356662 13.1649351 3.3451409 7.5889619 6.5869028 8.1172582 9.5139859 13.9275915 2.3836075 14.9137040 5.4932438 8.8353241 11.1504089 7.8955789 0.1356662 7.9005293 10.3551621 NA 7.9526749 5.3645094 NA 3.0425743 10.2889264 9.4089037 10.4254217 12.0152743 10.1549343 12.2307583 0.1356662 12.5897332 13.2844456 10.3201604 10.2707557 11.2195027 11.5637894 3.9685792 6.0485806 9.1635971 13.4339684 NA 10.5052884 3.3056204 4.7055467 3.0425743 9.9256322 12.1735811 10.8859793 10.3509206 13.1454759 6.8567903 10.7376939 11.2994869 12.0341034 11.8921431 5.7867427 11.9540735 11.2954047 NA 9.6250372 9.4153015 4.4639167 4.1129670 9.6845130 9.8473579 10.9827484 10.0263353 1.4575943 10.2383229 11.7034095 10.3112406 11.1217108 9.4018920 0.0000000 0.8792100 0.9056100 0.0051897 0.0020965 -0.4348100 0.5147900 0.4458500 -0.4428000 0.0004301 0.0004301 0.0004301 -0.4473500 -0.4467000 -0.0060369 -0.0060369 -0.0060369 -0.9025600 0.4345200 -0.4360000 0.4506100 -0.4485300 -0.9228400 -0.0041010 -0.0041010 -0.0126600 -0.0126600 -0.0126600 -0.0156920 0.0000000 0.0000000 -0.0703510 0.0020965 -0.9553400 -0.4348100 0.4433100 0.4433100 0.4458500 -0.4428000 -1.2929000 0.4531600 0.4428000 0.0309270 -0.9036300 -0.4338300 0.4257600 0.4248300 -0.4467000 -0.4442200 -0.0060369 -0.0060369 -0.0060369 -0.0060369 -0.9025600 0.4345200 0.4345200 -0.4360000 -0.4611600 -0.4453000 0.4550300 -0.9228400 -0.0041010 0.0227790 -0.0126600 -0.0126600 0.0081192 0.0226390 -1.0209000 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 0.338 -0.008 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 0.338 -0.008 8.3487954 10.6405100 0.4576468 9.0045135 5.6979322 11.4304553 4.2442173 -1.8640712 9.2500840 2.9936744 -0.8643338 4.9256814 NA 9.8120889 9.3983732 0.7206287 8.7641365 8.6748497 11.5469372 9.9394185 9.0681643 9.9890006 7.6053328 2.5951217 10.8771580 8.8274345 2.1356990 0.4576468 9.9878303 2.5279961 12.7539044 11.9471661 4.7206561 9.8593520 6.7168922 9.4337536 2.4576206 -0.2792838 0.4576468 5.0898879 9.2494333 9.2258034 10.5445515 2.3836075 6.7897905 6.2337232 10.4741488 5.5450819 9.6093967 -0.2792838 13.2319944 1.4575943 4.1356908 10.0296599 6.4268149 5.8771577 8.9088303 7.0605036 6.7939024 -1.8640712 14.2359632 -1.8640712 10.9952258 -0.2792838 8.7026963 3.9685792 8.0395727 8.3081187 12.7552467 3.7795434 8.3705083 13.1649351 10.2264651 11.1074142 13.9275915 12.8512241 9.2585189 10.2248104 12.3991069 6.6395173 9.1635971 8.8567903 -0.2792838 7.3031095 12.1310165 11.1337525 7.9235937 8.9819648 9.2422540 7.7813492 11.5767275 6.5280086 8.9071806 10.8016931 5.6670718 -0.2792838 4.3451409 7.4097193 6.4976347 10.8561490 8.9307403 8.5215533 13.3162607 6.5619554 10.8925288 10.4254217 10.5835491 10.1946974 6.0485806 9.3156002 11.3188611 10.1154734 -1.8640712 9.9453184 6.7281477 10.5052884 1.3056204 10.8936123 9.9256322 8.2071535 14.3475603 10.5501120 10.3924894 12.3048331 10.1314582 10.8464975 1.9430586 TCGA-AR-A0TS 46 0 NA 2558 breast stage iib t2 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 2 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 10.8249702 10.0792980 11.9178762 10.2550332 8.5095379 9.1599639 9.0122670 10.4268469 11.4377868 14.5592054 10.6922244 10.9032742 2.5592226 13.0890350 3.4336939 9.4574063 4.8970952 9.3369370 11.9929263 4.0331587 NA 7.7157294 7.3021893 9.4824930 11.1849338 8.0722945 3.8487281 9.3977285 12.0779874 4.4553864 9.4289045 7.7665104 0.3893465 5.1307662 9.5333208 10.2433891 9.3288791 10.7949733 10.0254714 11.6364857 1.1966700 7.5987530 15.7543835 9.0716627 9.9901421 11.7479511 11.3747861 4.3892983 2.4767705 10.3387619 10.7864398 -1.6108738 10.7291500 6.1837168 8.0966593 6.1307662 9.4377868 11.8951115 10.4319853 11.0256980 12.7353288 8.5803592 11.0504099 10.6895123 11.2673509 11.7928446 5.3081643 12.9984209 8.4061080 2.4767705 10.1541715 9.6294951 3.9775639 6.4767624 9.5642255 10.2213987 10.5043436 10.3185584 6.7157300 7.2565786 12.7405153 11.6976390 10.1374928 10.0749248 0.310470 0.317850 0.321390 -0.178550 0.334620 0.189930 -0.066537 0.121500 0.108020 0.151550 0.151550 0.746110 0.345810 -0.143630 0.059347 -0.114490 -0.060038 0.216350 -0.117060 -0.087464 -0.041313 0.384340 0.026636 0.026636 0.026636 -0.101880 0.044130 0.044130 0.057751 -0.084280 0.310470 -0.120190 -0.178550 -0.126560 0.179940 -0.066537 -0.066537 0.121500 0.108020 -0.073128 0.058491 -0.026562 -0.303350 -0.122530 -0.122530 -0.122530 -0.122530 -0.143630 -0.143630 0.059347 0.059347 0.292760 -0.058614 0.070619 -0.284190 0.039884 -0.087464 -0.069885 -0.153760 0.276610 0.026636 0.026636 0.011939 -0.101880 0.044130 -0.141990 -0.348490 -0.131100 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 0.000 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 0.000 11.1940360 12.6108115 1.3892915 9.4794123 8.7994332 11.8655399 8.1103993 7.8322432 8.2642812 7.4607622 6.3836542 9.3496278 6.7246898 9.7285932 8.7402392 5.5491701 10.0897397 11.0584065 6.0687804 8.4807353 9.2055076 7.8731155 12.2972233 4.7112306 8.6770124 10.6452137 3.4336939 NA 11.2050835 3.1966543 12.3112338 12.1772025 9.2604350 9.6108870 9.3608436 8.8343149 5.5889724 2.1966700 -1.6108738 0.7112306 8.2810839 8.7224554 8.7213364 5.7468529 10.0119421 6.3200369 9.7853694 6.4172061 10.0479578 2.0897354 11.9933898 4.4116703 4.2961931 8.5684874 5.7578073 8.9197063 9.9957051 9.4012260 9.5498016 6.1374933 13.0790796 3.6746979 10.4804047 4.6372277 9.6890804 5.3081643 8.6665872 7.9686161 9.8579392 7.8322432 8.4925879 13.0890350 10.1576539 10.9697941 4.0331587 12.0122669 9.1558289 11.7346844 13.4026226 10.0340575 10.3387619 7.5815930 -0.6106535 7.7269218 11.2696488 10.792845 4.865033 9.325938 9.556091 7.183716 10.159580 9.299193 8.190200 10.692224 7.674702 2.296193 6.936194 9.907938 13.869333 11.213463 7.428219 8.315596 10.489962 9.542219 11.436139 9.328879 10.008144 9.987352 12.281843 12.213762 10.851291 10.180463 6.492587 10.415713 10.024565 10.729150 5.943889 10.270812 9.437787 7.940047 13.951125 9.665424 10.546647 12.744582 11.386656 9.809787 3.476758 TCGA-AR-A0TT 53 0 NA 3316 breast stage iiia t2 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 5 black or african american NA 7 2 4 4 1 5 1 4 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6155591 9.7968151 12.0233123 9.7401521 8.2158159 9.5978248 10.2123486 10.6323370 10.0978216 13.3285505 10.1063868 10.9581151 0.2910141 11.9707768 2.5133897 9.1122461 3.7504350 9.3986565 4.8759668 12.5343759 2.4064822 14.0654818 0.7060221 9.4952894 10.4721558 5.7284076 1.0280033 11.3228196 10.0586362 1.8759766 8.1217827 6.7558890 -1.2940663 7.4808282 10.9459379 10.1143708 9.5206234 10.8840833 10.2538995 11.2780306 8.6144338 11.0425476 14.7818962 7.9345230 9.6609643 11.3251147 12.0719533 3.8353279 4.6602384 9.3012984 11.1562213 0.7060221 10.3557463 6.0458907 8.1998966 6.3642520 10.7788435 11.7667369 10.0935199 11.0764560 12.9100007 7.5230248 10.7113146 10.0081202 11.0723632 11.4341741 4.7060387 12.0651042 11.0049628 -1.2940663 10.9584108 9.2128443 3.2308639 6.6947256 11.4769114 10.5085574 10.4267128 10.0442203 4.1654698 5.6947270 12.3830999 11.3749260 9.6241588 9.7221528 -0.1287500 0.6122600 -0.0918160 -0.1073600 -0.1073600 0.0094893 -0.0320410 -0.0140900 3.6569000 -0.2891700 -0.3454700 0.3450200 0.1622000 1.1349000 0.2498100 0.0881130 0.8920700 -0.0226060 0.7000800 0.4358100 -0.2476700 3.6569000 -0.2773900 -0.1642800 2.9496000 -0.2956800 0.0225850 0.5829100 0.3976100 -0.1287500 -0.1287500 0.0027745 -0.1073600 0.0094893 -0.6687300 -0.2203400 -0.2203400 -0.0140900 -0.0819770 0.2362800 0.3069700 -0.0308210 -0.5718000 0.0928950 0.0928950 0.0928950 -0.0162920 -0.1570700 0.8161000 -0.3306300 0.0881130 -0.3270400 -0.3270400 -0.0226060 -0.0150540 -0.0150540 0.4070900 -0.2355700 -0.2974500 0.1755800 -0.2773900 -0.1642800 -0.2863200 -0.2973300 -0.0080244 0.3976100 -0.6760900 -0.6480000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 3.657 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 0.000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 3.657 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 0.000 10.6950806 12.7470156 5.1817744 10.1164924 7.1654728 12.0565659 4.8145658 NA 8.4082138 6.9681357 NA 8.2870908 3.5133897 10.5740919 9.1047848 2.0279679 10.6389939 9.7538465 8.5702272 9.5825579 9.1900785 8.3766971 10.7130683 4.4609260 6.3133710 9.8952478 2.4064822 NA 11.1109164 2.4064822 12.1742832 12.2189049 7.1938811 10.0613921 9.3615717 9.4988313 4.5133960 2.8759569 -1.2940663 0.2910141 8.3977846 9.6412061 9.4525553 3.2909994 8.3268474 6.2374222 10.0843359 6.0723631 9.5748635 NA 9.6099228 4.5389292 3.5640245 9.2007567 4.9315838 9.4550724 10.1364935 10.3133714 11.0542159 -0.2938894 13.4966441 2.6129422 10.9792538 NA 8.3942912 3.9154922 7.5198226 8.3462859 11.079730 6.454233 8.597825 11.970777 10.595925 9.794167 12.534376 14.899239 10.148466 10.865282 13.177018 11.212844 9.301298 7.793504 1.706022 8.926419 10.840788 11.1554476 6.1898562 8.3960392 9.0403144 8.3244263 11.2400909 9.0657907 9.7263265 10.1063868 5.7060415 -0.2938894 5.6008585 9.0748640 10.5667400 11.1687989 8.0458912 8.7394640 9.6338190 10.1582822 12.2808438 9.5206234 10.3244265 9.8411089 12.1372774 9.9663725 10.7667369 8.9492151 7.6602370 9.5750719 10.3372180 10.3557463 7.4064805 11.2728086 10.7788435 7.5613147 13.3031042 10.3092037 10.0586362 12.3450425 11.0375179 10.1344012 5.0983564 TCGA-AR-A0TU 35 0 NA 709 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 NA NA 4 4 NA 5 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 6.589149e-07 9.9201335 8.5947053 12.0383333 7.0420861 9.7338009 7.2873061 8.8509091 10.8840259 10.1893698 12.1859814 9.7652790 10.3345883 1.7838338 10.5862110 1.3244074 9.3605835 9.1565086 8.3701695 8.0437989 6.3356369 NA 11.3380815 5.2786056 9.5876791 10.4082216 4.1573025 0.9093507 11.3443480 12.2547776 0.6463470 7.8961622 5.1188248 NA 3.0248515 8.4092182 10.8980571 9.3474710 9.1893697 9.9065518 10.6550467 NA 10.0274482 13.4924551 7.9194992 10.3398250 10.4065589 9.0809662 3.9968316 NA 8.3215895 11.8006498 NA 11.2818747 3.7838443 6.6463384 4.3016901 7.3300340 12.5577299 11.2813305 10.1777194 11.9518297 4.3904957 12.0337091 10.7478226 10.3735777 10.5237755 3.4943388 12.0253914 9.3009739 -0.6755350 10.1870472 10.0144079 2.7256321 4.2313018 12.0414436 9.9219969 11.0989910 9.7848658 -0.6755350 9.0178969 12.7681952 11.8052001 10.4671551 9.7005353 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.87180546 12.27460121 0.64634702 8.90561054 2.77660937 11.76047068 1.32440740 -0.09064930 9.99373790 6.44335137 9.56281462 7.53142435 NA 10.77459008 9.74226244 2.84797687 6.14458891 10.31628594 8.07929757 10.64379974 8.45010765 6.16361345 9.59820551 0.09841956 9.73114641 9.46204148 1.78383378 NA 9.79405173 3.90936990 13.63963020 12.49800892 5.59119768 9.77665115 11.48144093 10.20284401 3.27860928 1.78383378 -1.67576544 NA 9.26398908 8.45240435 5.40122428 8.43945359 6.97775616 7.84207938 10.63473864 4.89426483 10.11882573 2.23130952 12.49511736 0.64634702 3.53386232 10.77285658 7.16908419 3.23129415 7.41187278 8.19939114 5.23130183 2.57233188 13.89488821 0.90935070 10.78614512 -1.67576544 10.45658821 2.49433880 8.56877356 8.50182923 10.203610 8.530203 9.327225 10.586211 9.699992 12.357058 6.335637 7.163613 9.851398 11.249964 12.490102 12.636371 8.321589 9.036077 5.182390 8.290194 10.374258 10.917801 4.514236 9.793034 9.943254 5.194773 9.902202 5.543579 4.494332 9.765279 10.918734 4.024852 9.432934 10.452246 13.398802 10.927109 8.427016 8.278606 5.301690 5.664261 10.722745 9.347471 10.381725 11.228103 11.537514 10.104950 10.306690 7.789976 NA 9.050756 4.879000 11.281875 4.157302 10.986411 7.330034 8.070269 15.070465 10.695642 10.166367 13.289518 11.665234 8.891415 1.646347 TCGA-AR-A0TV 66 0 NA 2288 breast stage iia t2 n0 m0 female 2005 NA no infiltrating ductal carcinoma 0 NA NA 3 1 4 2 1 5 1 1 4 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.24344952 9.17609733 11.64683062 9.32521729 9.06076563 8.84497592 10.35713156 9.47106834 10.76715637 12.66668919 9.17085118 10.35751638 -1.51457317 11.80715440 3.18566043 7.89885408 6.15765212 8.37092275 3.07018321 12.36500100 2.94465233 13.51239799 3.43942367 9.97083425 11.50551182 3.77062822 1.48522071 11.65983993 10.80065897 1.94467107 7.78900733 5.91149026 NA 3.91149026 9.99648479 9.69589762 11.01245896 9.05792649 9.85209484 10.14254478 3.57268355 11.48487404 15.35204641 5.63355036 10.77120643 12.01172554 10.06689765 5.77062822 NA 9.19431019 10.03741503 0.07025192 10.27190429 5.48522715 6.55668844 5.14343832 9.60481599 11.68397829 10.07394097 9.02438507 12.49750165 8.33853584 10.19947187 9.73799816 11.02729085 11.67288769 4.21314506 12.05472593 11.90571293 3.34320882 10.51174979 8.86135184 2.84136935 5.49645276 10.42810731 9.52756966 10.29056713 9.57732270 2.65514571 4.94465702 10.70771933 10.59961935 10.38760143 9.22921922 0.0176840 -0.0426520 0.0120970 0.0206230 0.0206230 0.0141900 1.0561000 0.3215700 0.3215700 -0.7618400 -0.7618400 0.7719500 0.0091705 -0.3483600 -0.7411600 2.0880000 3.6569000 0.6492800 0.0154470 -0.7579000 1.3111000 -0.3555600 -0.0268510 -0.0268510 -0.0332980 -0.0571160 -0.0571160 -0.0734330 0.6931600 -0.0018233 0.0176840 -0.3389400 0.0206230 0.0141900 0.0183830 -0.7516700 -0.7480300 0.3624800 0.3215700 0.3215700 -0.7674000 0.0062481 -0.7618400 -0.7361700 -0.7361700 -0.0418380 -0.0757450 -0.3550500 -0.3451500 -0.7411600 -0.7411600 -0.7403700 -0.7411600 0.0154470 0.0154470 0.0154470 -0.7434200 -0.7496800 -0.3555600 -0.7666300 -0.0268510 -0.0268510 0.0225850 -0.0819570 -0.0734330 -0.0388500 -0.7396700 0.6989500 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.654 0.654 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.202 -0.734 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 -0.152 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.654 0.654 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.202 -0.734 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 -0.152 8.57930387 11.36653150 1.29260508 9.19775336 5.24011203 10.52105633 2.07018321 NA 7.47957981 5.40408906 NA 6.63695372 0.48522071 10.61128546 9.39811561 4.78900929 8.55668882 8.22500687 6.66015139 9.39211689 9.01169633 7.77062822 9.72601767 3.29257564 9.93746754 10.46536590 0.48522071 1.29260508 10.79810926 0.48522071 12.24999424 12.87539526 6.92401791 10.50203457 10.87378183 9.81165582 2.94465233 2.87754795 0.07025192 9.03308486 9.50481700 9.56003681 10.25877765 0.80719003 8.22500687 6.75668974 10.67721082 4.34320882 10.45856492 NA 11.81165578 2.18567629 4.24011585 8.85043315 4.88337155 5.91149026 9.88557208 8.96197256 8.46964467 -0.51477929 13.40367032 -0.51477929 10.39436933 -0.51477929 6.12908309 4.86026759 8.41596354 8.89355607 15.069294 5.415965 8.921938 11.807154 9.253411 10.618690 12.365001 12.214953 11.082972 11.221370 12.924668 12.021838 9.194310 8.977080 1.485221 7.482405 11.228167 10.7523055 6.7613504 8.8526409 8.6538984 9.6526444 9.8292226 6.9114915 5.3307161 9.1708512 7.7212407 -0.5147793 6.0087872 8.0182642 8.2233188 9.2292192 8.7888015 8.1109353 10.2434495 7.0009262 12.7790902 11.0124590 9.8737818 9.4538931 14.5853342 9.1620650 10.5710306 8.1380711 -1.5145732 8.4409779 7.1326848 10.2719043 4.6349707 10.9632375 9.6048160 7.2165451 13.5079409 10.7236311 9.8893035 12.2537208 8.9569014 9.9172462 2.2925756 TCGA-AR-A0TW 50 0 NA 3009 breast stage iiia t3 n1 m0 female 2005 NA no infiltrating ductal carcinoma 3 white not hispanic or latino 3 1 4 1 1 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.74847650 9.18320983 11.89985981 9.45369659 8.85413220 9.58658537 11.45605974 9.47449384 8.90937620 14.72005304 10.83012750 11.20223827 -0.02136504 12.97134107 2.78598988 9.19052696 4.17503750 8.34204355 9.71165407 12.51504784 -0.60625433 14.41957276 -0.60625433 9.26025976 11.18707631 9.52810262 1.39369076 12.05712314 10.60282494 -0.60625433 8.46513863 6.33031458 NA 5.32441460 10.03617925 10.16969793 9.57358528 9.37524344 9.53066734 10.99126326 NA 11.82465140 14.34058250 8.30557752 10.44454522 9.28013487 10.56140796 2.91724078 1.85311739 9.11392054 10.20223821 -1.60647397 9.83610150 6.29454356 6.92115304 4.60312781 10.50546394 11.32994609 10.91208351 10.77738051 12.52585460 7.21704358 10.04068480 9.45166796 10.42916264 10.38767606 5.05188974 11.45183711 9.57482850 -1.60647397 10.38590650 9.14605693 1.09410092 5.84488776 10.10362156 9.75287668 10.28545990 10.53674047 1.20100647 6.81574064 11.49860252 11.37649161 10.58874077 8.77845994 -0.00754390 0.15136000 -0.01732500 -0.00034939 -0.01003700 0.37438000 0.37717000 0.28638000 3.38950000 0.49069000 0.49069000 0.49069000 0.36961000 -0.39314000 0.32971000 0.37520000 0.37520000 -0.00034939 0.37882000 -0.01636300 0.37569000 0.00284110 -0.40501000 -0.03419100 3.65510000 -0.40102000 0.29493000 0.29493000 1.01460000 -0.41106000 -0.38867000 0.00631470 -0.00034939 -0.01801200 0.35145000 -0.39146000 -0.40865000 0.28638000 1.54470000 -0.80389000 -0.41778000 -0.00574770 -0.79398000 -0.80729000 -1.10260000 0.00000000 -0.00325800 -0.70760000 -0.38778000 0.21937000 0.37520000 -0.39135000 0.42074000 -0.00034939 0.69867000 0.69867000 -0.02000300 -0.00593250 -0.86378000 -0.08287000 -0.40501000 -0.03419100 1.23470000 -0.40102000 0.29493000 -0.17734000 0.41752000 -0.39068000 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 0.141 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 0.141 8.28394029 12.41795019 7.66513904 8.35077833 3.85244836 10.48246443 0.39363586 NA 8.79455558 7.89551348 NA 5.75210898 0.97863496 10.92457018 8.83142823 1.85311739 6.68369505 8.37238669 11.60160567 11.27651027 9.34817066 7.81784259 9.64811433 0.71562984 7.51002038 9.40839407 2.91724078 NA 11.37077725 1.85311739 11.59104650 12.45808218 7.62729603 10.19700015 7.92505768 10.50350686 1.71558591 1.85311739 NA 4.03753158 9.19133785 10.06300429 9.33692358 1.39369076 9.68673967 5.38235945 10.65488964 6.10103440 9.89551348 NA 11.33417338 3.52295966 1.97863496 9.41442014 6.40702637 7.32441370 8.80730404 8.97769922 10.31402906 -0.02136504 13.44237594 -0.60625433 11.89439364 -0.60625433 9.21704358 2.64159227 8.34204355 9.31030217 12.483229 6.459766 9.937192 12.971341 10.251269 10.796955 12.515048 12.653272 9.313284 10.942498 13.107170 11.890655 9.113921 7.390856 1.563597 8.530667 11.726832 11.0368560 5.5022001 9.2210189 9.7424044 7.9823907 10.5694565 6.8324685 8.7534257 10.8301275 4.0941178 NA 4.2516585 8.1469764 9.9162578 10.3456894 10.3738158 9.8638267 10.8407594 7.1147751 10.8519341 9.5735853 10.2094598 10.5494432 10.4563970 9.2477654 10.2655814 9.2422991 0.3936359 9.0206628 8.7324127 9.8361015 5.6224941 10.2356336 10.5054639 7.4215818 12.8654149 10.3336226 10.2740250 12.7130661 9.8623003 9.2578623 2.9786350 TCGA-AR-A0TX 64 0 NA 1972 breast stage iia t1 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 3 NA NA 6 3 2 4 2 6 2 6 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 7.144024e-06 1.976745e-06 9.885474 10.318721 12.073013 10.235314 8.663254 9.722822 11.173244 10.826473 10.565803 14.883537 10.969198 10.635594 3.928692 17.214197 3.391039 9.896274 5.675246 8.755385 9.988069 13.089463 -1.563199 12.725636 3.244202 9.171340 10.292878 6.591660 NA 10.850205 10.605514 3.436841 9.044172 8.301028 NA 4.846233 10.394669 10.143338 9.705384 10.518991 10.236124 11.729020 7.040468 10.300254 14.533125 8.264328 11.002182 11.628364 11.338652 4.414122 2.524314 9.074372 11.955126 -1.563199 11.387944 5.636514 7.767759 6.073467 10.079796 11.551072 9.510314 11.475246 12.611143 7.025556 11.025088 10.412801 11.258217 11.285660 4.811882 11.540130 11.054539 1.021835 10.473702 8.595451 4.081851 5.837721 10.436137 9.480553 10.613638 9.702457 3.137274 10.056145 12.940419 12.200677 9.570626 9.682989 -0.00069303 -0.00346270 -0.00346270 -0.41113000 0.01922300 0.02062300 0.00875280 0.01133300 0.01133300 -0.42254000 3.65690000 0.00499690 0.00000000 0.00000000 0.40577000 -0.00470790 -0.00470790 0.00013863 1.19500000 -0.42385000 0.00360760 -0.41586000 -0.02137300 3.65690000 -0.42200000 -0.03572100 -0.03572100 -0.03572100 2.88280000 -0.00069303 -0.00069303 -0.00539920 -0.40285000 0.02062300 0.02062300 0.00875280 0.00875280 0.01133300 0.01133300 0.01237600 0.00152550 0.00152550 -0.42254000 -0.00719580 -0.00719580 -0.00719580 -0.00719580 0.00000000 0.00000000 -0.42233000 -0.00470790 -0.00470790 -0.00470790 0.00013863 -0.41058000 -0.43446000 -0.40550000 -0.00696210 -0.41586000 -0.00069303 -0.02137300 -0.42985000 0.00708260 -0.03572100 -0.03572100 -0.01161100 -0.00899060 0.35235000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.385 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.385 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 0.000 9.8657254 13.0097197 7.6340588 10.0302330 4.7943951 12.2608061 4.8291595 0.4368015 8.4055087 9.1083831 NA 7.6535875 4.5453692 10.7551022 8.9446365 1.8962718 10.4244612 9.4347270 11.1879674 11.3316597 9.6662977 7.9952623 10.5612863 2.4368548 6.3793558 9.8849582 3.4812343 NA 10.8821154 1.8962718 12.4861799 12.4362254 8.6389658 10.2728922 7.7360501 9.2124521 6.6365144 2.4368548 -0.5631985 1.6067738 8.2633903 9.3025752 10.4791853 5.5453661 8.3924192 7.2602092 9.4785011 7.8735536 9.7711152 -1.5631985 10.9080090 3.9604005 3.9604005 9.6174100 6.1250931 7.2050259 9.2909310 9.4961863 9.3399704 -0.5631985 13.8320078 1.0218350 10.8644166 -1.5631985 8.0255565 4.0515548 8.2361233 9.3217755 12.165684 6.502930 8.763271 17.214197 9.624194 10.391402 13.089463 9.448768 9.200054 10.789989 12.630367 8.200054 9.074372 7.932697 1.244217 6.361654 12.250122 11.335065 5.492126 8.767759 8.684769 7.865202 11.009542 8.226376 9.213275 10.969198 6.867295 NA 5.080696 7.838596 12.626358 11.186921 7.596713 8.360169 10.748023 8.847293 10.940327 9.705384 10.669862 9.793294 11.388855 10.287810 10.338463 9.417695 6.244196 10.015946 8.200054 11.387944 7.964319 10.769292 10.079796 7.442467 13.606649 9.858381 10.494495 12.265375 11.110151 9.564836 3.722247 TCGA-AR-A0TY 54 1 1699 NA breast stage iia t2 n0 m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 NA 1 5 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.121176e-07 10.1922252 9.3559512 11.3127103 8.9025418 10.4725203 8.8225938 9.3594968 10.6798659 8.6812830 15.6813983 11.1192289 11.5000875 -1.6326289 12.1832501 3.2252441 8.2861299 6.3272688 8.1254899 9.4320092 12.8467310 NA 13.1850996 2.0677075 8.7038735 11.7998084 6.0951860 1.6892097 8.7226177 10.1304788 2.5371967 7.0883653 7.6664747 NA 4.5170111 10.5512119 8.6607383 6.6846785 9.1930204 10.3934441 11.0868692 4.8102117 10.6687627 14.1621138 8.0334907 9.2972646 10.6451350 10.6293614 3.3672732 7.3039040 9.4567170 9.7220669 0.3672592 11.4355409 4.3896356 4.5170111 4.1221509 10.2894792 11.7859097 9.2643556 11.7046096 12.4136231 7.9966232 11.1179735 9.6710529 10.8668632 10.5293431 5.0254762 11.4853964 6.7851189 NA 9.8318122 10.7737373 3.1818182 5.0396911 11.3423979 10.5176484 9.6509336 10.7909077 0.3672592 7.3039040 11.2907797 10.8220798 9.3868573 9.1624946 0.00000000 0.00000000 -0.00235530 0.02920700 0.02721600 -0.72721000 0.02202400 0.01488800 0.01488800 0.79026000 -0.13238000 2.83490000 0.06408200 0.01670500 -0.00290910 -0.00041585 -0.00041585 0.00138680 0.00652620 0.01684500 0.01419000 0.52941000 -0.74281000 -0.74560000 3.65690000 -0.01656700 -0.01656700 -0.02164700 0.66272000 -0.74560000 0.00000000 -0.72287000 -0.72376000 -0.72721000 -0.71347000 0.00221930 -0.71631000 0.00903120 0.01488800 0.01488800 0.01028500 -0.00622860 -0.75978000 -0.74699000 -1.29290000 -0.73735000 -0.73468000 0.01670500 -0.53073000 0.01726400 -0.00041585 -0.00041585 -0.00041585 -0.73558000 0.00652620 0.00652620 0.00291330 0.01419000 -0.15745000 -0.75487000 -1.29290000 -0.74560000 0.01558700 -0.03885000 -0.75866000 -0.76766000 -0.53002000 -0.76612000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.090 -0.766 0.000 0.000 0.000 0.000 -0.727 -0.727 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.737 -0.737 -0.218 -0.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.090 -0.766 0.000 0.000 0.000 0.000 -0.727 -0.727 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.737 -0.737 -0.218 -0.218 7.40618544 13.13555420 3.75958197 8.25753069 1.73322417 10.47219276 2.27414236 NA 8.79143284 6.74230539 -1.63262893 6.67560566 -0.04781556 11.36885062 9.85158587 5.10873353 7.48620754 9.33881013 7.08151220 9.29874262 9.53381872 7.37849342 11.22369199 1.36725922 7.27415728 8.76172907 0.95225901 NA 10.58915562 0.36725922 13.82954506 12.70272662 7.21275608 10.38477091 6.81434918 9.96112436 6.90254153 8.76065708 -0.04781556 -0.04781556 9.12465641 9.90594036 10.57305977 4.20015905 8.09637730 7.64803755 9.80865453 5.57671864 11.38859349 NA 9.75851006 1.82668068 4.45472864 10.05315411 5.60633858 4.84299894 8.19381510 7.64571607 8.11881029 1.36725922 14.23953253 2.27414236 11.19817778 NA 9.65958817 4.87506247 8.64803719 6.30978010 14.017320 8.429313 8.137104 12.183250 10.693415 10.826954 12.846731 12.126114 9.006290 10.790028 12.250292 10.566018 9.456717 8.737954 2.826701 10.142465 13.571455 10.047186 3.454729 8.995712 10.128818 8.697063 9.479289 5.333052 9.158429 11.119229 4.122151 6.724818 4.433353 7.884011 9.616380 9.928554 6.702656 10.008867 10.175426 3.826701 11.373733 6.684678 10.550592 10.386162 11.396899 9.170590 9.713226 9.822594 NA 9.146329 6.661888 11.435541 5.859120 9.772940 10.289479 7.491775 14.098028 10.562946 11.499927 10.640188 10.491388 8.143700 2.274142 TCGA-AR-A0TZ 43 1 3262 2316 breast stage iiia t2 n2 m1 female 2004 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 3 1 1 2 2 4 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8694261 10.5684740 11.9511243 9.8025755 7.8571954 7.6883860 10.7312581 9.5090687 9.1036330 14.3874091 12.0190745 11.0108164 -0.0631077 13.4115939 4.5807003 9.9414139 6.9198358 8.5274293 9.3962738 13.0429553 -1.0631077 14.7430646 4.2766902 8.5702735 11.3438444 7.1117679 -2.0631077 10.5664266 10.1291350 0.9368169 7.6933984 7.1535885 -2.0631077 3.1847722 10.5346620 10.6858736 9.4316977 10.7965711 9.5367550 12.5204539 0.5218548 11.2005516 14.3543157 9.1580547 10.8672100 12.1441617 11.7063702 3.9592137 5.1462968 9.5538504 10.8278664 -1.0631077 11.1629533 8.7482170 5.2129661 4.5218046 10.0450399 12.0978166 10.6562311 11.6005115 13.2164165 6.8346872 11.1725573 11.2665615 11.8314705 10.9370184 5.8437327 11.5762960 13.8699566 -0.4781452 10.3329117 8.9716413 3.7750400 5.2943928 10.6515171 9.4832545 11.3370546 10.3272799 0.5218548 6.2129661 12.5448082 10.9934800 10.1133271 9.1346733 0.01362700 0.01362700 -0.00047474 0.03998400 0.00980770 0.00716260 -0.03141700 0.01064400 -0.87825000 0.00660620 0.00660620 0.01510800 0.00327090 0.01329300 0.03025000 0.88697000 -0.90907000 -0.87318000 0.00000000 -0.87310000 -0.03645900 -0.04247400 -0.88761000 0.02062700 0.02062700 -0.02348700 -0.02348700 -0.02348700 0.48261000 -0.89797000 0.01362700 0.01410500 -0.87902000 0.00716260 0.00716260 -0.05213200 -0.05213200 0.01064400 -0.87825000 -0.88715000 -0.00172170 -0.00182290 0.00660620 -1.04370000 -1.04920000 0.22462000 0.25427000 0.01329300 0.01329300 0.03025000 0.01580700 -0.87666000 -0.89965000 -0.87318000 0.00000000 -0.00433110 -0.87310000 -0.03645900 -0.03445000 -0.89192000 -0.89629000 0.02062700 0.01580700 -0.02348700 -0.02348700 0.02434800 -0.86644000 -0.89660000 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.396 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 -0.276 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.396 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 -0.276 8.0661253 12.8556589 7.8240626 9.7353140 2.7948317 12.0748740 -0.0631077 NA 8.4885504 7.7776203 -2.0631077 7.2737285 3.9141244 10.2598971 10.0089748 4.6233401 7.4740604 9.1186157 11.2569376 9.9609430 9.7714792 8.9557379 9.6368484 2.7948317 8.4105480 9.2993340 2.1067838 1.6372856 10.5563744 2.9368358 11.2154369 11.1674632 7.7963771 9.8804560 7.7441974 9.4206580 6.2268611 0.7441611 1.1067503 4.6092704 8.4594238 8.7728925 9.6185199 2.4604018 4.6917296 7.3777112 9.7815481 5.4682249 9.8236820 -2.0631077 9.9442200 3.7948213 4.8557057 9.7307991 5.1664303 -2.0631077 8.1823949 7.2965914 8.7304457 -2.0631077 13.1637060 0.2588204 10.1948193 NA 7.5806988 4.3118809 7.6057269 8.5923729 14.829983 7.476001 8.702543 13.411594 9.714098 10.170162 13.042955 11.562437 9.519342 10.586547 13.055621 12.573920 9.553850 9.021651 3.222248 7.156011 13.302925 11.7842911 7.4545115 9.2976894 10.2688788 10.5225091 11.6740061 6.1511607 9.6250926 12.0190745 6.1656608 2.1847564 3.1847722 8.4688667 12.2056766 10.3636312 8.2877816 8.9276553 14.0567763 3.8675802 11.9022974 9.4316977 10.6736669 9.8819203 10.8133592 9.8456102 11.2291639 9.0002372 3.6647673 8.5062612 1.3962691 11.1629533 7.3053486 10.9171604 10.0450399 8.5227624 13.0725912 10.1930510 9.0163269 12.3073934 11.2288762 9.7998670 -0.0631077 TCGA-AR-A0U0 73 0 NA 1988 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA 4 4 4 5 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.7384427 9.6883358 11.4572484 9.7228243 8.6773437 8.7100718 9.3146752 10.4652589 10.5917547 11.8871699 9.5965034 10.4226984 3.1061138 12.1353955 2.9686069 8.6466768 6.6579043 8.0020279 5.5535663 3.7341351 NA 7.9618265 6.7447087 9.6289573 11.1452766 8.6662673 1.6466696 13.4317715 9.8178535 1.6466696 9.8002287 7.7234923 NA 6.4540311 10.4255752 9.7087228 9.5139555 9.0162740 9.7823860 10.9547313 3.8165997 6.8512481 14.0470892 8.1279515 9.9870721 11.5809204 10.8343381 4.3471199 -0.3532843 8.6239565 13.1877733 NA 9.0750368 6.9366956 7.9204726 5.0217151 10.5811047 11.4726293 10.1814659 10.7404244 12.6821632 5.2613879 11.2556245 10.2903841 10.9028854 11.0896202 4.0389980 11.4888306 8.7733812 0.2316782 10.0813049 9.8784979 3.0272602 6.2165325 11.7701515 9.9028855 10.1091790 10.6477330 1.4540179 7.7964238 12.9121453 12.9641600 9.5031022 8.4843045 0.1077400 0.1077400 0.2125300 -0.0899640 0.0353830 -0.1126000 -0.2873100 0.4861300 0.3302400 -0.3557800 -0.3557800 1.1795000 0.0012481 0.0012481 -0.2880100 -0.2880100 -0.2180000 -0.3002800 -0.3002800 -0.3233300 -0.2611900 -0.3333900 -0.0220490 -0.0220490 -0.0220490 0.3309200 0.3309200 -0.2131700 -0.0131470 0.0194100 0.1077400 0.0130310 -0.0899640 -0.1126000 -0.2704000 -0.6387600 -0.2913000 0.4861300 0.4861300 0.3481100 0.2997900 0.0266540 -0.3557800 0.2991500 0.2991500 -0.3191400 -0.3191400 -0.7049600 -0.5872600 -0.3079300 -0.2880100 -0.2180000 -0.2180000 -0.3002800 -0.3002800 -0.3002800 -0.3156400 -0.2611900 0.4057700 0.0000000 -0.0220490 -0.0220490 0.2087000 0.3309200 -0.2131700 0.4267100 0.4331100 -0.2745200 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.486 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 0.000 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.486 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 0.000 8.6124609 11.7620455 NA 7.3013124 4.3471199 10.7221559 2.3471270 6.0560676 9.5781530 9.5023238 NA 6.3401634 5.8946044 11.4791712 9.5899241 1.2316167 4.6910707 10.2673547 7.4378394 9.7499646 9.2913982 6.7913348 11.0317302 2.5429514 9.2003060 9.6445619 1.6466696 -0.3532843 10.1790326 2.5535571 12.6934597 12.3044417 7.3881439 10.6738916 12.6852528 10.6941415 4.4540311 1.9686069 NA 0.2316782 9.1224103 8.8327910 6.0303802 1.2316167 8.7733037 7.5231934 10.3142318 5.2465905 9.8096974 3.9686069 12.9108994 3.8165997 3.8561292 9.8526593 6.3196685 8.1385298 9.1395314 8.9424456 9.5655399 9.9887514 13.1061724 0.6467157 11.2505348 -1.3532843 9.7785337 3.9320801 8.1284759 6.6745821 12.812604 6.995405 8.547544 12.135396 9.694482 11.478578 3.734135 6.571489 9.455271 10.320869 13.455892 11.396127 8.623956 9.313788 2.816600 7.821602 10.932368 9.830312 5.038994 8.583314 8.462060 9.310173 8.791870 7.865845 4.691071 9.596503 9.422287 NA 7.485881 10.064097 11.425165 9.961826 8.239134 9.144528 8.632519 8.816602 10.384997 9.513956 10.432129 9.383079 12.002303 10.226464 10.453629 8.863422 3.170246 9.480682 9.017364 9.075037 5.836502 10.566657 10.581105 7.687460 12.934894 11.613903 11.056598 13.254585 10.732149 8.880296 3.504659 TCGA-AR-A0U1 36 0 NA 4052 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 NA 1 3 NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.733986e-06 3.121176e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0000000 0.1322900 1.1591000 -0.3295900 0.4522400 -0.2021200 1.0319000 -0.1238200 1.0247000 0.0637950 0.0637950 0.4610900 0.0091631 -0.3477900 0.0662290 -0.3110800 0.0873900 0.0846430 -0.3492500 -0.3506500 0.0513870 0.8451400 -0.3079200 -0.3079200 0.0982700 0.2756800 0.0606510 -0.3088600 0.1008900 -0.1731000 0.0000000 -0.2328800 -0.3295900 -0.2021200 -0.2021200 -0.3496200 -0.3525700 -0.1238200 0.4643400 0.0937660 -0.0284910 0.0852210 -0.3448100 0.4587100 -0.3373300 0.0712480 -0.3152900 -0.3767900 0.0619370 0.0943460 -0.3110800 -0.3752700 -0.3752700 0.0846430 -0.3361800 0.0989970 -0.3330600 -0.3341000 -0.3329800 -0.0295840 -0.3079200 -0.3079200 -0.3574500 -0.2262500 0.1144800 -0.3180200 -0.1363900 0.1105200 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.331 -0.331 -0.131 0.000 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.331 -0.331 -0.131 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AR-A0U2 47 1 2551 NA breast stage iiia t2 n2 m0 female 2004 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 3 1 1 1 2 3 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 10.6231284 10.2304209 12.1137329 10.1488347 9.0224796 9.6191518 10.8557771 9.0480601 8.4141004 13.0366049 11.1961277 10.4235780 -1.6891946 12.6416595 4.8653992 8.5563654 6.4193366 8.1405353 12.2379425 12.7620882 2.6327335 13.2027388 2.7702370 8.6901911 11.4843337 6.8768668 2.8957679 11.5685202 10.6137372 -0.1042321 9.3795909 6.4400951 NA 4.3108127 10.4445971 10.5248282 9.8663605 8.5348145 9.9654487 11.7567328 5.2177038 8.1181676 13.5576275 10.6438841 10.5141576 11.8421941 12.1296944 4.0921736 1.4807304 9.2873767 10.4307264 -0.6891946 10.7671671 6.6236957 6.5251324 3.7370810 10.6694639 12.0603679 9.2952312 10.8896570 13.1899651 5.9761482 11.2456093 10.9872150 11.5524980 11.6647865 4.9255248 12.3523007 9.3255306 -0.6891946 10.7186116 9.6037094 3.4511847 6.3220399 10.9949038 9.9328645 10.7244406 10.2646454 1.7702370 3.5202714 10.7228532 11.0558567 9.8205876 9.4304024 -0.348020 0.288810 0.288810 0.459730 -0.357950 0.074066 0.040326 0.054518 -0.356910 2.081800 0.049398 3.597600 0.332700 -0.300870 0.426030 1.217000 1.234200 -0.358060 0.377920 -0.350880 0.019083 0.353770 -0.372340 0.101030 0.101030 -0.358740 -0.358740 -0.360680 0.749180 -0.348020 -0.348020 0.000000 -0.821540 0.074066 0.073546 -0.835190 -0.348470 0.054518 -0.356910 -0.380490 0.088837 -0.333230 -0.864840 -0.375720 -0.326700 0.021603 0.021603 -0.300870 -0.300870 0.051814 -0.368460 -0.363860 -0.390870 -0.358060 0.377920 0.377920 -0.350880 0.019083 0.367390 -0.820150 -0.372340 0.101030 1.433300 -0.358740 -0.360680 0.749180 -0.833380 0.665120 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.391 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 0.149 -0.299 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.391 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 0.149 -0.299 8.0823024 11.3775746 5.0522811 7.7286654 4.3331804 11.5378269 1.1181604 NA 8.1261960 7.0421321 -1.6891946 6.8287179 NA 11.6542760 8.9310326 6.3108127 7.8126497 11.1060407 6.9474371 9.9176806 9.8226790 7.8787689 10.2259451 1.1181604 6.8499717 9.0615197 0.3108054 1.1181604 10.2195806 3.4401017 11.1195758 11.6492705 7.6100208 10.4659471 7.9419895 8.9920512 8.0042997 2.4807304 0.3108054 3.0112451 7.9564708 7.2177028 9.9955613 2.0112451 8.0712167 6.6145935 10.3758922 7.4554711 10.5982365 NA 8.2177033 3.3552136 4.7865441 8.9707194 5.1100291 4.6327393 8.2938064 8.6270943 8.2326536 0.8957679 13.2112078 1.3108054 9.6528873 NA 9.1578701 4.1687944 8.2041143 7.5611107 15.153792 5.925522 9.103603 12.641660 9.567021 10.715156 12.762088 14.321537 8.696675 10.645645 12.496308 11.510332 9.287377 7.371508 3.865404 7.832413 11.894248 11.073402 8.159435 8.607729 9.969917 10.815632 10.793946 5.842194 9.431699 11.196128 6.500638 NA 5.193456 8.656994 11.204873 10.063611 9.556942 9.333874 9.221455 6.600832 11.493258 9.866360 10.589843 10.069036 11.683950 9.800159 11.305166 9.892955 2.632734 9.058511 6.539632 10.767167 6.031911 10.777909 10.669464 8.737077 12.583224 10.029774 9.987651 11.646622 9.548023 10.545929 2.770237 TCGA-AR-A0U3 59 0 NA 4080 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 6 3 1 1 1 5 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 10.5722576 10.3091151 11.6114499 10.5355792 8.4261880 9.1000670 10.1038114 10.1038114 8.0071574 13.7368274 11.7078434 10.6242810 3.0970714 12.2304637 3.5121004 7.0666909 4.7447639 8.2263476 10.3271651 13.5256341 1.5121257 14.1826256 3.4381065 8.9567029 10.8919136 8.5974418 3.5824958 10.1378109 10.9817439 2.3601114 9.3065179 6.7524168 -0.8097012 4.1901723 10.1282833 11.2633114 9.4117612 11.3647877 10.6905180 11.9965222 3.2776426 12.2083742 13.8827350 9.1738517 9.7505069 11.4051002 11.0427035 3.4381065 4.9715344 9.2696588 11.2488423 NA 11.3415077 3.9450645 5.4569605 3.9975273 11.3456247 11.6248022 10.4014539 11.6174868 12.5992997 8.4870904 11.4607613 10.7032748 10.8465989 11.1108990 5.5824928 11.8537321 8.7826310 NA 10.2208412 9.9583583 2.0118892 4.7137343 8.3449922 11.0143372 10.0643870 10.3569648 2.6496155 10.5771143 12.4257395 11.0497088 10.4002365 9.0773947 -0.0626290 0.0578500 0.6355400 0.0083351 0.0068044 -0.7497400 -0.0056757 0.0171240 -0.7523600 3.6569000 2.4426000 1.2743000 0.0465590 0.0197350 0.0069435 2.7896000 -0.6685500 0.1469700 0.0376410 0.1527800 0.0352950 -0.0956480 -0.7032500 -0.6357600 -0.4307200 -0.6290300 -0.7207500 -0.6351900 0.0669450 -0.6582600 0.0241270 -0.7490700 0.0420240 -0.7318700 -0.7517600 -0.0094046 0.0000000 0.0171240 -0.7513200 -0.7735400 0.9591900 0.0418830 -1.1354000 -0.7444700 -0.7444700 -0.7060300 -0.7060300 0.0062481 0.7053200 0.0069435 -0.6927800 -0.7514200 -0.7595200 0.0253900 0.0376410 0.0376410 0.1527800 0.0352950 -0.0956480 -0.7404600 -0.7032500 -0.6357600 0.0267950 -0.6082500 -0.6412300 -0.7287000 1.0659000 -0.7207500 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 0.000 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 -0.196 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 0.000 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 -0.196 8.1530701 12.0547471 7.0103524 9.3246002 1.2708279 11.6626110 0.7751770 NA 8.6455014 7.0789172 NA 7.1673971 5.4569605 9.8158828 8.6659076 0.1901723 8.1000673 8.9383670 9.4153814 9.4105523 9.6207834 7.5867790 10.0458212 1.1901723 9.9959179 8.9682512 1.1901723 1.7751348 10.1127584 0.7751770 12.1123867 12.0274077 7.1385411 10.2097648 7.8661309 8.8854023 5.2125421 2.3601114 0.7751770 7.8122261 8.0910407 8.1443702 10.4950957 2.8906218 5.1277529 5.8906145 9.6780140 6.6820268 9.3738094 NA 10.5646702 2.8906218 3.9450645 10.0053492 6.3939618 3.3600973 9.8897464 7.3550806 8.2041945 1.9975453 13.3633046 0.7751770 9.9341669 NA 7.7938003 4.9180952 8.1674538 8.7844987 15.093659 5.475578 7.586779 12.230464 10.710793 10.979300 13.525634 11.813141 8.695985 11.525564 12.377062 10.478463 9.269659 8.327165 1.512126 7.240022 11.704395 10.684530 7.433348 8.676003 9.924037 9.046600 10.116848 5.565213 9.671973 11.707843 8.035664 NA 6.869654 8.302561 9.815883 9.756228 8.904024 8.843019 12.161538 5.512104 10.758909 9.411761 10.797967 8.790087 9.249518 8.828610 10.423794 8.974809 NA 8.790254 4.438100 11.341508 5.997530 9.637257 11.345625 7.466298 13.549237 9.917244 9.822260 12.700938 10.434538 9.428579 0.775177 TCGA-AR-A0U4 54 0 NA 3261 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 2 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3906999 9.1113300 11.8530818 9.9986131 8.6334109 8.9382655 9.0621115 10.7986135 12.7379506 14.9491950 10.3303904 10.8598981 -0.5416180 10.5800186 2.2658269 10.5561882 7.2976885 8.3980643 10.3472284 11.0314222 -0.5416180 10.1718717 5.2398448 8.7485042 9.7798497 6.4068530 0.4584870 9.9098560 10.4894971 1.2658569 10.7273195 8.2283228 -1.5416180 4.1589267 9.4090410 10.3357693 9.0121144 9.7622659 9.7235140 10.8033359 0.0434845 8.4170377 14.8652383 7.9744020 12.0434430 10.6495444 10.6421206 3.3653706 1.7803941 9.7070058 10.4732031 1.7803941 11.2171248 6.1309103 8.5630838 5.4584837 10.8459640 11.8816011 9.9677653 11.5523978 12.6467649 5.7894032 11.4459268 11.1220855 11.1515364 11.5858347 4.6264041 12.5727155 9.3921757 6.5617737 10.6983820 9.6439801 3.1092435 6.3713742 11.5086739 9.2802592 11.3321215 10.0283408 0.4584870 4.0731947 13.1706897 11.8108045 9.6891061 10.3574644 0.00000000 0.42943000 0.91362000 0.03469800 0.29392000 1.20920000 -0.00081083 0.06081500 0.03095200 0.10601000 0.10601000 0.90536000 1.40680000 -0.16315000 -0.35314000 0.41047000 -0.16238000 0.59389000 -0.37368000 -0.19310000 0.39482000 0.43938000 -0.38486000 -0.38486000 0.40113000 -0.00441050 -0.00441050 -0.38592000 0.05297300 0.01086300 0.00000000 -0.38457000 -0.36837000 -0.39239000 -0.17070000 -0.37424000 -0.37424000 0.24673000 -0.38020000 0.04351700 -0.17662000 -0.33316000 1.00410000 0.40863000 -0.78789000 0.02148400 -0.36916000 -0.07238800 -0.61344000 0.48736000 0.41047000 -0.16177000 -0.16177000 0.29742000 0.03738000 0.03145700 -0.24738000 -0.19748000 -0.37988000 -0.38815000 -0.38486000 -0.38486000 -0.00205760 -0.00441050 -0.38592000 0.31705000 0.00724260 0.00599080 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.647 0.647 -0.369 -0.369 -0.141 -0.141 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.647 0.647 -0.369 -0.369 -0.141 -0.141 8.4386247 14.1104338 0.0434845 9.0923885 3.5185351 12.6754583 2.2658269 NA 9.1458608 7.5191810 NA 8.3513620 1.2658569 10.8617636 9.3631198 -0.5416180 7.6183561 11.1936181 7.2463881 9.3457057 9.1383435 7.0434473 11.0340244 5.7622664 8.0207278 10.2295618 1.2658569 0.0434845 10.1388447 1.7803941 12.7546844 13.0188777 6.4009989 9.1889552 8.8572290 10.0791631 3.6679375 5.3164644 -0.5416180 -0.5416180 8.9158659 8.8784452 7.5164769 3.1589186 6.9911136 5.5459468 9.6433605 6.5406349 10.0396858 0.0434845 11.3661269 4.9342193 5.1999510 8.8141005 6.1211170 5.3164644 11.4128632 9.2577669 6.6776534 -1.5416180 12.7464139 0.7803941 11.5379699 NA 10.2565519 2.1589186 7.8443474 8.5366362 12.5749916 7.3623673 10.0528097 10.5800186 9.1537134 11.1838514 11.0314222 10.0690487 8.8868452 11.7134946 12.9735690 12.4247202 9.7070058 8.4485892 0.0434845 7.9483334 11.7698078 10.100988 5.524575 8.979104 9.466914 7.458485 9.963895 7.701659 6.715873 10.330390 4.239849 2.043450 6.486391 8.852883 13.213112 11.182146 7.772751 8.643361 10.624648 7.409770 10.636938 9.012114 10.618041 9.934725 12.030119 10.521206 9.970732 9.482239 NA 9.325161 6.179585 11.217125 7.259385 10.718817 10.845964 7.904100 13.602028 10.643670 10.538970 12.905116 11.208983 8.705226 2.043450 TCGA-AR-A1AH 51 0 NA 3807 breast stage iib t2 n1 m0 female 2004 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.768666e-06 9.710324e-07 9.5640460 9.2076720 11.3074531 9.0135064 9.4399671 9.2247552 8.8781546 10.5261590 8.7956319 12.1383154 9.4329840 10.5330329 0.7457967 12.6877846 2.2312173 8.1737246 8.5479765 8.8129487 6.9630140 3.1787465 NA 11.4387475 8.4939763 9.1795775 9.7830557 5.2052165 1.8832689 6.3722226 11.4238552 1.8832689 8.8965461 7.0125698 9.9875282 2.6717915 10.0591199 12.2181695 10.0509330 9.9726771 10.4451823 10.3740466 2.8832884 9.4448352 13.2901682 8.7436065 8.3262304 10.7567309 10.3744112 3.8832884 0.4238471 8.7803071 11.2953755 -0.5760454 9.7912700 4.5937780 6.1033361 2.7457751 9.2150182 12.1672170 9.9301628 11.3335608 13.4851420 5.3896391 11.3074531 11.2018830 11.3397346 10.6065599 4.4682510 11.3222677 6.2567446 0.7457967 10.2876543 10.3167774 4.8172037 4.4011321 8.3277372 10.0686128 10.8978146 9.2919060 1.0088454 9.5919004 12.4649154 14.1347154 10.1359523 10.1458089 1.451400 0.397490 0.971720 0.061508 -0.751150 -0.755130 -0.265400 0.759300 0.059651 0.222220 0.802280 -0.770730 0.053094 0.058367 0.058652 0.070243 0.070243 0.050677 0.041600 -0.763380 -0.748460 -0.766460 -0.760550 -0.745860 -0.745860 0.049540 0.049540 0.072971 0.069669 -0.732660 2.168700 0.052099 -0.744820 -0.786230 -0.765690 -0.765100 -0.757800 0.037076 0.059651 0.044715 0.066086 -0.783190 0.222220 -0.765340 -0.755730 -0.748380 -0.748380 -0.768600 -0.768600 0.058652 0.062223 0.070243 0.079015 -0.757800 0.028060 1.625800 -0.763380 -0.754610 -0.759030 -0.754440 -0.760550 -0.745860 0.022865 -0.719420 0.072971 0.079735 -0.794420 -0.719150 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.463 -0.463 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.463 -0.463 6.862647275 12.014208329 7.976524028 8.798894584 2.185137087 14.059374959 0.745796658 3.124295045 9.298836534 9.372222341 6.558281412 8.113853098 4.573604777 11.596126427 9.754772115 0.423847055 4.763703696 10.937829510 8.012569791 8.953285904 8.736919720 7.345696196 11.312408217 1.231186613 7.792361488 9.025626009 2.816169598 NA 9.159411215 3.281831758 13.807120747 11.885078826 7.409697264 9.756451244 8.227986015 9.915708366 5.709257546 -0.576045406 0.008773707 -1.576045406 7.976524028 9.029334718 4.306495572 4.378053772 9.749340510 7.001284328 9.849595571 5.521886202 9.589390296 5.053211279 11.905150122 -0.576045406 3.423860497 11.080610766 7.013731344 1.593784005 8.119083259 6.845920286 3.781412174 6.547977232 13.519458276 -0.576045406 10.378778527 NA 10.743809547 3.378053772 9.932145200 7.750284917 11.650014 9.435082 7.999395 12.687785 10.013506 12.086746 3.178747 7.120823 9.299605 11.183535 13.145221 11.137027 8.780307 8.451761 2.671792 7.237636 10.754772 10.370761501 5.244034582 10.264239788 9.804316268 8.960102454 9.473479081 2.883288450 4.205212634 9.432984036 9.232819502 0.008773707 10.559885052 8.547976461 10.968819622 9.221516797 8.511318199 9.509991491 8.292677776 3.378053772 10.911044606 10.050933021 10.322834454 10.883543001 11.828065419 9.002227975 10.492969250 9.610588418 -1.576045406 9.356704832 7.092740230 9.791270028 6.527142293 10.121257255 9.215018197 8.034879828 15.790587225 10.043158146 10.904140544 12.388015563 11.350707128 9.309551613 1.745796658 TCGA-AR-A1AI 47 0 NA 3296 breast stage iia t2 n0 m0 female 2005 NA no medullary carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 9.70667300 9.26534453 11.13210375 10.39024356 8.43668739 9.44305066 10.33124324 10.83183648 11.38547919 13.81989946 10.23061805 10.81394485 2.96873590 12.11427211 1.90458043 10.89379820 6.61007253 10.10783391 11.10516150 5.81148901 -1.55469706 10.38951164 9.27647294 9.15587747 10.49126648 5.54319890 0.44519698 10.57830777 11.09307365 1.44514400 7.94102060 6.32780950 NA 6.99975427 10.10203737 10.76286086 9.66312327 9.99591240 10.65735793 12.20474175 -0.55490899 8.61759309 15.12810534 8.43157658 9.98237916 11.92721722 11.72303416 4.57444670 0.03012416 9.83102802 10.02023202 NA 8.50450996 5.18663129 9.20005309 6.07452256 8.81585302 11.78640642 10.03247434 10.71925250 13.11294244 6.40516700 11.20588554 10.71385087 11.61007253 11.80560121 4.37590131 12.22046724 8.33086177 1.25253677 10.46579840 10.19209970 3.45414957 6.05249632 11.52548352 10.12816024 10.29222292 9.75804861 3.35205226 5.36402957 13.60979760 12.49399301 10.24687394 9.73172344 0.2925900 0.8397800 0.2557100 -0.2955800 0.2972100 0.0424230 1.4572000 -0.0159050 0.2897500 0.2488400 0.2488400 0.2632300 0.6448400 0.1808400 0.8291700 -0.3505500 -0.3061800 0.4854100 -0.2763300 -0.2961700 -0.2851500 -0.3123900 -0.1959000 -0.1615600 -0.1598400 -0.0330210 1.0835000 -0.0358820 0.2469700 0.6724800 0.2925900 0.8137300 0.3207300 -0.6719800 -0.0160560 -0.5910900 -0.5643700 -0.0159050 0.2791300 0.2648000 -0.0083262 0.4193900 0.1876500 -0.3074700 -0.2921100 -0.3032400 -0.3032400 -0.5888400 0.1770300 -0.3123900 0.0059440 -0.2931000 -0.3235500 0.0205970 -0.2872900 -0.3525000 -0.5595900 -0.3043000 -0.2981800 -0.0139780 -0.1959000 -0.1615600 -0.0487730 -0.0305660 -0.0358820 0.6459400 -0.0091544 -0.0885660 0.645 0.220 0.000 -0.259 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 0.000 0.645 0.220 0.000 -0.259 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 0.000 9.36029799 11.94849445 -0.55490899 7.51662823 3.93220294 12.32580140 1.44514400 4.74894420 9.19754624 7.28751570 2.61508666 8.43526938 5.38767961 10.87169244 9.11316419 3.76709329 6.35205579 11.65019515 7.15597180 9.09262396 8.08611552 7.40806135 9.70432041 2.90459970 8.01881274 10.16026966 -0.55490899 NA 9.34754076 0.03012416 12.28249787 13.55833800 6.91277080 9.92140553 10.89843625 9.60440626 5.32780950 2.76710388 0.44519698 2.83747908 8.90254636 7.76934595 7.83318295 1.25253677 8.38016838 5.70255227 9.93099496 6.38180421 9.72361504 4.25252163 10.83183648 3.08902350 5.55368919 9.94186955 6.72658603 8.38768004 8.91175179 8.64361055 10.34301112 5.64483689 13.03106705 0.76706150 10.44551774 -1.55469706 9.57830777 2.83747908 8.31398814 6.60503646 8.446574 9.977521 7.964802 12.114272 9.538583 10.693686 5.811489 6.711952 9.174277 12.202972 13.396678 11.808068 9.831028 7.582157 1.767104 7.707260 10.729122 11.171597 6.500448 9.608815 8.598718 9.490243 9.639559 8.096217 5.748947 10.230618 9.557605 NA 8.569287 9.702365 13.317889 11.057573 5.912772 7.312445 9.254934 9.246874 10.113058 9.663123 9.722453 9.894830 12.368122 9.209208 10.730279 9.447277 NA 9.195002 9.666149 8.504510 4.399363 10.460232 8.815853 8.365667 14.109973 11.658118 10.198382 13.810907 11.745375 9.468920 4.767093 TCGA-AR-A1AJ 83 0 NA 3072 breast stage i t1 n0 m0 female 2005 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 2 4 2 3 2 5 2 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 10.3399061 9.7096815 11.9242945 10.0505431 7.6629531 9.9247251 9.2625255 10.5949538 10.4952634 12.9031073 9.9654787 10.8094393 2.7169909 10.8331841 2.7994604 10.1826795 5.8193540 9.1183745 6.7639559 3.8774596 NA 10.9826770 9.3944018 9.1425965 10.5446626 6.0807408 0.6295665 11.1869939 10.6397086 2.8774498 9.2433197 8.1273820 0.6295665 5.3160299 10.2294430 9.9804694 9.5469022 10.8741913 9.8875073 11.8318071 0.9514386 7.1725615 14.2211694 8.6059080 9.3785615 11.3674113 10.8408102 3.7169909 NA 9.7894016 10.9635240 NA 10.9865323 6.4998953 8.6379587 5.8389845 9.9062363 11.9995364 10.4202860 11.4931357 13.1093736 6.2442401 11.3046051 11.0144461 11.3054872 11.7601007 5.3977140 11.5104529 8.0724735 -0.3705268 10.9409947 9.5632209 2.3221878 7.1293758 11.8207437 10.0828008 10.1343492 9.7003220 3.2733816 8.1802772 12.6596800 12.3032809 10.5386733 9.5152265 -0.00360110 0.48165000 0.49003000 -0.00010071 0.13806000 0.00000000 -0.10710000 0.07038600 0.06345800 0.61661000 1.09530000 0.10731000 0.26687000 1.15320000 -0.06826100 -0.06826100 -0.06826100 -0.09538400 -0.12953000 -0.16485000 -0.16485000 -0.15579000 -0.14768000 -0.14528000 -0.14528000 2.00420000 2.01830000 -0.18471000 -0.03231400 -0.00360110 -0.00360110 0.04722700 -0.00010071 0.00000000 0.00000000 -0.10710000 -0.10710000 0.07038600 0.06345800 0.06345800 0.07215900 0.14087000 -0.32935000 -0.00276090 -0.00276090 -0.00276090 0.12152000 -0.16967000 -0.17151000 -0.06826100 -0.06826100 -0.06826100 -0.06826100 -0.12953000 -0.12953000 -0.12953000 -0.16485000 -0.16485000 -0.15579000 0.03538300 -0.14768000 -0.14528000 0.13376000 -0.13147000 -0.18471000 -0.03231400 0.35484000 -0.17424000 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.359 -0.153 0.000 0.000 0.123 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.216 0.107 0.000 0.122 0.000 0.000 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.359 -0.153 0.000 0.000 0.123 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.216 0.107 0.000 0.122 0.000 0.000 10.3480631 12.5092091 0.6295665 9.3819108 5.1373232 11.2287457 5.5953157 3.5837237 9.1974863 8.5837267 NA 8.5589808 6.7275625 11.1343492 9.1917726 2.6295198 10.8159540 9.3256284 8.1233858 8.6518980 8.9543071 7.2368609 11.3118665 5.1686902 8.4043173 10.0325422 3.7169909 NA 10.2112016 2.2144979 12.3196373 12.1984364 7.7562347 10.0505431 11.8147154 8.7445739 4.3574535 3.0218528 -1.3703403 -1.3703403 7.8069498 7.6379587 6.4239462 6.5895328 8.9967811 8.3860867 10.0094501 5.3977140 9.3098897 3.3299703 12.1675978 4.8193565 5.0557943 9.7470110 6.5385832 8.2895260 10.4933293 10.1706268 8.0578905 0.6295665 13.1164281 1.4369081 10.7344565 NA 8.6601974 4.1841216 7.8679348 8.3282346 13.0608959 10.6358563 8.5676394 10.8331841 9.9793643 11.3166871 3.8774596 8.7575244 9.0930546 10.9166654 13.6902683 12.0468553 9.7894016 7.9218516 0.2144979 7.2841662 11.9255860 11.684304 4.357453 8.720966 8.973826 9.410070 10.458793 8.859551 7.309011 9.965479 9.518274 NA 7.872704 9.759451 12.609045 12.381283 7.745874 7.654670 10.610741 9.325628 11.268523 9.546902 10.423946 9.726245 11.948355 11.957223 11.309450 9.063116 6.690226 9.476243 9.140294 10.986532 7.113346 11.751933 9.906236 8.247916 13.545830 10.519794 10.228048 12.965967 10.809439 10.160424 4.629531 TCGA-AR-A1AK 70 0 NA 3159 breast stage i t1 n0 m0 female 2006 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 5 2 1 3 3 2 3 4 2 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 3.81477e-07 10.3509942 10.1879323 11.6208916 9.6322579 9.2706116 9.2435748 9.8660042 9.5862455 10.5371823 12.5706698 11.7078749 10.4570669 2.8313503 12.9616425 2.9833676 9.5825300 6.3052884 8.5622997 9.4935319 12.3218746 2.0877004 13.2191958 5.5317963 9.9948623 10.4179893 4.4943260 -0.3386152 11.1038582 9.2659863 1.4687918 8.3232111 7.6642482 1.2464081 5.4028995 9.8848314 10.2917001 10.2102549 11.1170171 9.7823188 11.2777520 8.4687877 10.6934787 14.8234702 8.7219939 9.6768479 11.6446047 11.8044973 5.8806023 2.4687918 9.4279619 12.2920414 0.9833858 10.8073651 5.5562516 7.3088914 6.3549193 10.3756785 11.5283255 10.1874430 11.9143940 12.8634802 8.7738724 10.7034343 10.6127941 11.2037394 11.5986229 4.9652117 11.3685764 10.7640649 -1.3386152 10.5884701 9.5914311 3.8393550 6.8708862 10.6145381 9.7574892 10.7268491 10.2270111 3.3618666 8.3549198 13.2260588 12.4648578 9.8206736 9.6236059 -0.0271240 0.7710600 0.7910800 -0.0109310 -0.0080164 0.0094491 0.4537700 -0.0113350 -0.0048461 -0.4421000 -0.4421000 0.8069700 0.7596000 -0.0011087 0.0016219 3.6569000 -0.4252400 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0103700 -0.0569810 0.7581500 0.7581500 0.6377400 -0.0619580 -0.0619580 0.7974300 -0.0271240 -0.0271240 0.0012481 -0.0064664 -0.0050410 -0.0034627 0.3942900 0.3942900 -0.0113350 -0.0048461 -0.0174440 -0.0191770 -0.0013858 -0.4421000 -0.0215100 -0.0215100 -0.0215100 -0.0682070 -0.0011087 -0.4547900 0.0016219 -0.5193800 -0.4424500 -0.4424500 0.3416100 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0103700 -0.4497500 -0.0569810 0.7581500 0.0123760 -0.5301200 -0.0619580 -0.0246610 0.0070826 -0.0381700 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 0.000 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 0.000 9.7508835 12.0980144 6.0960615 10.1717026 4.0877004 10.4542233 2.1208496 2.1208496 8.4079471 7.8561896 -1.3386152 8.3332922 4.2463929 10.0834977 10.0178849 5.5921700 9.4663706 9.2834848 9.1085161 10.7777769 9.5421644 8.3479336 11.3904164 4.7488959 8.5743222 10.2364994 5.5562516 -1.3386152 11.0032298 3.8313605 12.1982873 11.9384297 8.5240703 9.7024075 11.0740028 9.0101611 5.5317963 1.2464081 0.2463473 8.0771746 9.4623329 8.5100560 8.7607808 5.1043744 7.3135969 6.1290377 10.1285290 7.9560537 10.0467561 NA 11.7915208 3.5194161 5.8213046 9.0999753 6.1617567 4.2160202 10.4481110 9.2889669 6.0189857 -1.3386152 13.3466745 0.2463473 10.3395929 NA 7.8388522 6.1208641 7.6185353 8.1512809 14.828846 4.519416 8.333858 12.961642 9.949145 10.520579 12.321875 12.362739 8.554735 11.211218 13.253715 11.637639 9.427962 8.392752 1.983349 7.895053 11.296924 11.227487 7.389353 8.460715 9.092930 9.271535 10.173462 8.339153 6.672660 11.707875 6.785554 4.831360 5.870887 7.253666 10.712302 10.305289 8.394448 9.054824 13.039321 6.487981 11.744267 10.210255 10.841653 9.205431 11.493730 10.561168 10.838541 8.767342 3.053754 8.991039 5.727523 10.807365 4.705829 11.027905 10.375679 7.279819 13.178303 10.404163 9.756170 13.156601 9.617809 9.788137 3.053754 TCGA-AR-A1AL 60 0 NA 2971 breast stage iiia t3 n1 m0 female 2006 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino 8 2 2 3 2 4 3 3 2 3 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 11.01256623 10.31329631 11.99157184 10.18743645 8.10745772 9.45847880 10.50041130 10.05820270 10.73330197 12.02045803 10.64085967 10.57385534 3.15991976 12.74468649 4.13393336 9.15508663 5.80378241 8.99552466 9.54671160 12.30503862 4.13393336 13.05241389 5.95989995 9.37840194 10.59514902 4.63797534 NA 11.34123732 7.99281544 3.52249522 8.05992953 7.57173899 2.35256080 4.87613381 10.41394150 10.80403903 10.59007912 12.87619357 10.54301238 12.00910695 10.45520226 10.48217539 15.08882693 9.42595542 9.94456010 11.92858222 11.56065225 5.74488764 -1.64746744 9.31835458 12.43538469 -0.64746744 11.16655189 5.23521391 6.22908797 4.23521391 10.75771185 12.09771942 10.38771310 12.48346262 13.15387454 7.83839969 11.05863463 10.90065771 11.55408171 11.70019173 5.55224180 11.98249610 11.16855398 -0.06250494 10.28293805 9.20587998 3.88831464 5.56202257 10.61260776 10.48731751 10.35749306 9.77253051 3.15991976 10.63739443 12.90679945 12.79116731 10.18031000 9.43471933 -0.41014000 0.79510000 0.78138000 0.00000000 -0.00360630 -0.00160350 0.00152550 -0.00207840 -0.00207840 -0.00277070 -0.00277070 -0.00277070 0.00208050 0.00208050 0.00402430 0.00402430 0.00233120 -0.00110870 -0.00110870 -0.00083160 -0.00249380 0.00180300 -0.00539920 -0.00617870 -0.00617870 -0.01202400 -0.01202400 -0.01202400 0.00208050 -0.00290910 0.00499690 0.00583090 0.00000000 -0.00160350 -0.00160350 0.00152550 -0.00249380 -0.00207840 -0.00207840 -0.00207840 0.00208050 -0.00193990 -0.00277070 -0.00235530 -0.00235530 -0.00235530 -0.00235530 0.00208050 0.00208050 0.00402430 0.00402430 0.00233120 0.00233120 -0.00110870 -0.00110870 -0.00110870 0.00088926 -0.43344000 0.00180300 -0.45133000 -0.00539920 -0.00617870 0.00013863 -0.01202400 -0.01202400 0.00208050 -0.00345960 0.00346870 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2691964 12.9040984 7.3355636 10.0573386 3.5798439 10.0745240 2.9375327 1.5225078 8.2906797 8.2654599 NA 8.6181737 3.4818543 9.8941510 9.5479425 0.9375704 10.3309233 10.0425683 10.9114694 8.8150726 9.7388639 8.6134900 11.2308129 3.5224952 9.7095724 10.0351261 7.0285272 NA 10.0620850 5.3067653 12.7462289 11.5674965 8.9412851 10.3309233 7.9801042 8.9337709 5.0249978 1.6745058 1.8120053 4.6924216 8.5921688 8.7470332 10.0787885 5.9524827 7.4487317 4.2352139 10.2432147 7.2167565 9.7243471 0.6744607 11.1207547 3.3525749 5.3969643 9.6821536 5.0874162 4.3969678 9.4373788 7.9356530 6.6004972 -0.6474674 13.7865143 2.3525608 10.1157828 NA 8.9109910 6.7319489 8.1024398 8.7156099 12.063374 4.418662 8.588585 12.744686 10.438043 10.800687 12.305039 12.788436 9.450319 11.198060 13.997975 11.660625 9.318355 6.970956 NA 7.950623 11.653209 11.590378 8.047798 8.814050 8.862345 8.680123 10.178547 6.856396 7.156701 10.640860 4.259461 2.159920 7.182293 6.382797 11.688240 10.325550 8.198060 7.842418 12.707715 6.391489 11.842260 10.590079 10.102440 9.286261 11.445658 9.724891 10.539613 9.656922 NA 9.357030 6.864324 11.166552 7.753450 10.983065 10.757712 7.785112 14.145564 10.045622 10.437379 13.296779 10.548250 10.123647 3.396968 TCGA-AR-A1AM 52 0 NA 2991 breast stage iiia t3 n1 m0 female 2006 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.387189e-07 10.289032 9.449326 11.883338 8.850438 8.357480 9.233362 11.570961 9.509327 10.248530 12.804420 11.532750 10.255221 3.406387 13.814648 3.669424 9.439812 7.357480 8.661890 8.259387 12.872976 3.958926 14.341849 7.436137 9.623032 10.827613 6.870186 NA 11.544408 9.263541 3.958926 8.413884 7.704070 -1.500626 4.649248 10.108677 9.922089 9.536359 11.269750 9.804420 11.295335 9.348904 10.912333 14.402792 8.134419 10.703761 10.988845 10.619413 6.326047 3.958926 8.377550 11.467626 -1.500626 10.335154 5.618438 6.015199 4.821425 10.405262 11.680030 10.584971 11.830976 12.780994 8.763941 10.860072 10.660870 11.110293 10.997101 4.975231 11.569116 11.882258 0.499476 10.317282 8.965065 4.454163 5.069354 10.385195 9.210305 10.248949 9.404133 4.023060 11.512821 13.686387 12.578734 10.710474 10.225291 0.01078100 0.01078100 0.42714000 -0.01291100 -0.01291100 -0.15559000 0.44826000 0.00146480 0.00146480 0.02014100 0.02014100 -0.00029591 -0.00974090 -0.00452050 0.01008500 0.01008500 0.01008500 0.00354690 0.00021666 0.00104870 -0.11612000 0.00674360 -0.31569000 0.00493610 0.00493610 0.00521410 0.00521410 0.00521410 0.02280400 0.01036300 0.01078100 -0.15116000 -0.01291100 -0.15559000 0.27010000 0.00000000 0.00000000 0.00146480 0.00146480 -0.00245100 -0.00957260 -0.00019923 -0.43338000 0.02182200 0.02182200 0.02182200 0.02182200 -0.43999000 0.06931900 0.01008500 0.01008500 -0.43663000 -0.43663000 0.00021666 0.00021666 0.00021666 0.00104870 -0.11612000 0.00674360 -0.43175000 -0.31569000 0.00493610 0.01944100 0.00521410 0.00521410 0.00841340 0.00340800 -0.43218000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 9.1352168 12.9220892 7.8658211 10.4213397 4.4302384 11.5786502 3.8214245 0.4994760 8.9953536 8.7150319 -1.5006261 7.5638910 3.3574816 9.9681227 9.9888450 2.0844725 9.1397437 9.4796384 11.1802978 11.2537599 9.8851886 7.8055607 10.4460396 3.4063870 10.5187420 9.8696412 6.1215501 NA 10.6467037 4.1433526 12.2454881 12.3516381 7.6967151 10.1789789 9.2759317 9.5030167 5.9913518 2.8214245 0.8214653 4.8745363 9.3068537 9.6262033 10.4973838 4.6080226 8.7216416 6.6744239 10.2154608 5.5655880 9.5743091 -1.5006261 11.4022507 2.8214245 4.8214245 9.6251253 6.5984262 6.0072942 9.2223064 7.9893468 8.7126030 1.8214245 13.7357372 -0.5004220 10.3100704 -0.5004220 7.5411578 5.9833152 7.9046400 9.1586026 13.259189 4.747425 8.713818 13.814648 10.481779 10.572301 12.872976 12.568781 9.204267 10.578984 12.614624 9.964555 8.377550 8.491021 NA 7.351248 11.409767 11.637931 6.287402 9.457326 9.275109 7.073145 10.804189 7.578983 7.132494 11.532750 8.061741 3.669424 7.733118 6.781243 11.646067 10.458776 8.714826 9.311676 10.788077 6.766285 11.773321 9.536359 10.326444 9.957393 11.202970 10.029905 10.604425 8.145157 NA 9.784936 7.664405 10.335154 6.357480 11.001542 10.405262 7.473914 13.932139 10.209875 10.043980 12.840253 11.408454 9.964044 2.499502 TCGA-AR-A1AN 46 0 NA 2920 breast stage iia t2 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white hispanic or latino 2 2 2 5 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 11.08671903 9.34184569 12.04583422 9.08557018 7.67939354 8.58237987 10.49715536 10.13038214 10.31189791 12.90600134 11.18525902 10.41940247 -0.53011402 11.94199664 3.86225300 10.18804517 7.14942095 7.86868430 9.33644675 13.29559497 0.05491792 12.91954055 4.94567324 9.27709418 10.42667968 7.11379633 NA 9.17643648 11.09473592 3.22482749 7.62222537 6.66469758 0.05491792 4.27729298 9.86814981 10.90769257 9.86064689 11.82735505 10.91236567 11.72201456 0.46999014 11.63657437 14.94600632 8.63839935 9.98317461 11.19807358 10.68152464 3.51433691 1.92937441 10.09382199 11.66761795 0.79185574 11.62744533 4.75534161 7.23481168 5.15644111 10.17945519 11.69016764 9.95928678 13.72182968 12.55416756 8.05490273 11.05419838 10.54797116 11.05231773 11.62712952 4.75534161 12.95091999 10.82225987 1.92937441 10.40878498 9.65295555 2.47713330 4.75534161 9.43355915 11.52488393 10.40215521 9.94466038 2.27730042 8.74140361 12.53687057 11.71445298 9.71786797 9.98957672 -0.00968060 0.44139000 0.92837000 0.01181800 0.93650000 1.23510000 -0.00609040 0.01642500 -0.01161100 -0.41838000 0.00458000 0.48285000 -0.43496000 0.00013863 0.00000000 0.46724000 0.03340800 -0.00970170 0.00041593 1.46920000 -0.00263220 0.01866300 -0.44921000 -0.44921000 -0.44921000 0.02820000 0.02820000 0.02567100 0.46741000 0.05266800 -0.00968060 -0.46259000 0.01181800 -0.48655000 -0.49423000 -0.00609040 -0.48544000 0.01642500 -0.01161100 0.00291330 0.00083195 0.01279500 -0.50982000 -0.02425100 0.01084200 0.01084200 0.01084200 0.00013863 0.05096100 0.00000000 0.00000000 0.00360760 0.00360760 0.01530800 0.00041593 0.00041593 -0.01133500 0.01852300 -0.48565000 -0.48134000 -0.44921000 -0.44921000 -0.01943800 0.07484000 0.02567100 0.02454800 -0.03585700 -0.07200700 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.05114095 14.50316990 4.84497812 10.16124780 3.29877560 10.26841229 1.46993806 0.79185574 8.67328858 8.09016007 NA 8.77071641 2.63985727 9.89358170 9.02452940 0.79185574 9.14589751 9.43644588 11.35449266 10.20253196 9.22799708 8.13349880 11.43950689 3.22482749 9.20125942 9.48256497 8.77486216 NA 10.44543021 1.92937441 13.56092125 12.78968316 8.67083927 9.73965169 7.98957672 9.70595475 3.79186615 1.27727066 -1.52990571 2.46993806 8.57191605 9.45079411 11.81479116 5.92115066 6.64875447 5.09929520 9.80253656 5.23812573 8.93244273 -0.53011402 12.53594558 3.75534695 2.27730042 10.09731016 6.80251378 3.63986885 9.41684671 8.42849334 6.25130061 0.05491792 13.43093792 0.79185574 10.49265507 -0.53011402 7.52793203 5.32792085 7.99154112 8.39326817 13.3182495 5.6891090 10.1227854 11.9419966 11.5793402 11.1740603 13.2955950 13.2918639 9.0947359 10.9853940 13.2252976 11.0022964 10.0938220 9.3602047 0.7918557 7.0052158 11.3696750 11.4491870 7.3798332 9.1029357 9.4139205 7.7343831 10.6731661 6.4006780 8.2381248 11.1852590 4.4472221 0.4699901 6.4642942 6.8730380 10.8506721 10.4540029 8.6927354 9.1388255 13.3455939 5.5574040 10.1922784 9.8606469 10.4818665 9.7639868 10.9535044 10.0684583 10.6699195 9.5494252 1.7918557 10.0582663 5.1564411 11.6274453 8.3962366 10.9116501 10.1794552 7.1065650 14.7173856 10.8827749 10.6996606 12.2435949 10.5574033 9.8142364 2.6398573 TCGA-AR-A1AO 47 0 NA 2618 breast stage iia t1 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 2 4 1 3 3 6 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 1.040392e-07 10.14276225 9.79716217 11.38832673 9.66677984 8.30554195 9.85204395 9.12207061 10.32525699 10.92455645 12.99534057 10.35197775 10.52857650 3.97911076 11.54008226 3.88600379 10.85076122 5.62296841 8.93814844 8.66678002 10.42998025 0.39418485 10.83294198 7.42757349 9.51114383 10.14862008 5.43854570 -0.02092584 10.86150096 10.30479290 4.32488979 9.15570143 9.24667956 NA 4.78646568 9.94921858 10.02578199 9.50005869 10.68790918 9.58150227 11.11524931 6.91771220 8.88600318 14.81603416 7.51244261 9.10925424 11.16502047 10.51373973 4.67955329 0.39418485 9.79289390 12.17161095 -0.60581515 11.15570136 6.29501767 8.67376063 7.23020013 10.57343721 11.65301056 10.08152578 11.69921434 12.63925713 6.92942531 10.75060207 10.42898695 11.15362226 11.22565530 5.09459079 12.08086951 9.47629925 -0.60581515 10.70986579 9.20230997 3.65040844 7.26451485 10.46225666 10.08720146 10.17714829 9.75883198 3.48160894 8.40117733 13.01328111 12.64422644 9.70135100 9.59075227 0.0451410 0.0451410 0.0451410 0.0231450 0.1629500 -0.0076101 -0.0238400 -0.0143660 -0.0143660 -0.0220580 -0.0220580 0.0245480 0.0018030 0.0018030 0.0259520 0.0259520 0.0259520 -0.0280810 -0.0280810 -0.0751500 -0.0289010 -0.0062286 -0.0372180 -0.0372180 -0.0372180 -0.0062286 -0.0062286 -0.0062286 0.0793030 0.0188570 0.0451410 0.0000000 0.0231450 -0.0823940 -0.0076101 -0.0238400 -0.0238400 -0.0143660 -0.0143660 -0.0143660 0.0221640 0.0221640 -0.0220580 0.0237060 0.0237060 0.0237060 0.0237060 0.0018030 0.0018030 0.0021895 0.0259520 0.0259520 0.0259520 -0.0280810 -0.0700010 -0.0700010 -0.0102970 -0.0289010 -0.0062286 0.0217440 -0.0372180 -0.0372180 -0.0760090 -0.0062286 -0.0062286 0.0104920 0.0435820 0.0081959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.1502894 13.2148277 3.9177086 10.0906830 4.8860038 10.0060971 4.3248898 2.7864709 8.9706345 9.0106990 0.7160690 8.1459622 6.1423440 10.8133203 9.1023718 2.9177182 10.3874424 9.4158241 9.2466796 9.7278645 9.0231971 7.5815019 11.0152862 5.2683333 7.9563924 10.1610931 6.2706672 NA 11.1152493 3.1490317 13.1438101 12.4035414 8.9157506 10.3842541 10.6702745 9.4541705 3.9177086 4.3483457 -0.6058152 NA 8.6313601 10.0152862 8.6133187 5.5839733 8.7560829 5.7428793 10.1101121 6.3885030 9.6029941 0.3941848 11.2057255 4.6979295 4.4816154 9.4777558 6.7297635 6.4869074 9.8764539 10.1002144 8.0307747 8.5987214 13.6791188 2.4816089 10.8507612 NA 9.1615071 6.1220701 8.5260070 9.3785686 11.4819511 7.4303237 8.5876755 11.5400823 10.1824607 10.7759635 10.4299803 10.5381710 9.3025427 10.9142777 13.3074136 11.2197053 9.7928939 8.2505756 -0.6058152 7.4656121 10.9963850 11.525525 5.554021 9.218305 8.367130 7.861756 10.327136 8.466953 7.773528 10.351978 6.795029 5.348346 7.828778 7.957842 11.576700 11.091335 8.326365 8.619358 10.469295 7.886003 10.684212 9.500059 10.538490 9.935247 10.989641 10.804071 10.825125 9.392035 3.038015 9.676173 7.745089 11.155701 7.911820 11.228599 10.573437 7.608712 14.066382 10.680708 10.940804 12.570245 10.563136 9.787541 3.094591 TCGA-AR-A1AP 80 0 NA 2856 breast stage i t1 n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 1 2 2 5 1 4 4 4 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.01673e-07 6.935946e-08 9.7240090 9.8870966 11.8025970 9.8125549 8.3905237 9.5137161 10.1328942 8.7782293 9.7293708 12.2438292 11.8064072 10.4163982 1.4324784 13.0123204 3.8474959 9.4154481 4.9135836 7.9946968 9.0086239 12.6974835 NA 14.5230081 5.2904355 10.3220194 10.8753980 3.4913529 -0.1524841 11.3540476 10.3856810 3.3710570 8.1119348 7.3788731 0.8475159 4.5199193 9.6280319 10.1654698 10.2149068 11.1495597 10.4432157 11.6181560 3.6023737 11.1526988 14.6415017 8.5397067 9.4786691 12.0949746 10.8552201 3.4913529 4.8016864 9.3483340 11.1609420 NA 10.8764341 5.0954181 5.9664328 5.4768483 10.4102114 11.5260922 10.8035052 12.8182271 12.9040451 8.4059128 10.4305749 9.5961965 11.0927476 11.4663364 5.2050445 12.1551198 10.4446134 -1.1526444 11.0720968 9.5304867 2.7553363 5.7543825 8.9229712 10.2159985 10.6863021 10.2344323 2.8474959 8.1626416 12.6287493 12.2403461 9.7737880 9.4125942 -0.1881000 0.3892000 0.4041100 0.0488300 0.0260920 -0.0329510 -0.0146410 -0.5953600 0.0211830 -0.5941900 0.0597940 0.6421300 0.0570680 0.0485460 0.0345360 2.4837000 2.8814000 0.0549450 0.0377800 0.0000000 0.6220600 0.0716780 0.0814660 -0.5472400 0.0793030 -0.5396600 0.0803120 0.0803120 0.6995100 -0.1517000 -0.1881000 -0.0013858 0.0358060 0.0079175 -0.0351270 -0.0232920 -0.0268050 -0.5953600 0.0211830 0.0491140 0.0918800 0.0270760 -0.5941900 -0.5801600 -0.5801600 -0.5685100 -0.5603700 0.0485460 0.0485460 0.0649400 0.0546600 -0.5884300 -0.5884300 0.0549450 -0.5838200 0.0879690 0.0080567 -0.5693200 0.0690950 -0.5629600 0.0910100 -0.5472400 -0.5758500 0.0913000 0.0803120 0.6671500 -0.2546700 -0.5632600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.152 0.237 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.152 0.237 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 0.000 8.7900066 13.0274011 8.7943983 9.5199173 4.0954181 10.4732009 2.0174231 NA 8.6819633 7.3552868 -1.1526444 7.3766490 2.6548479 10.6604715 8.8190355 2.3069330 9.0942326 9.4722875 8.7737880 10.1682927 9.4432902 7.5021277 10.3272723 2.7543745 8.5039167 9.4722875 5.3069220 NA 10.8646484 3.1694280 12.1795286 12.0775125 6.8074940 10.1649047 9.6090433 9.7671002 5.2737583 2.6548479 -0.1524841 9.9520908 8.0397849 9.4529716 7.8726318 4.5754152 7.8996252 7.8864111 10.5838940 7.1649049 9.7278408 -0.1524841 9.7163146 2.9349505 3.8016864 9.4228612 7.5872052 2.3069330 8.9832014 8.6676711 4.9349552 0.8475159 13.7681240 NA 10.4159232 NA 7.9870434 3.3069184 7.9135812 8.3272724 14.230272 6.239809 8.100158 13.012320 10.293541 10.469086 12.697484 12.051452 11.287962 11.229846 13.732378 9.579660 9.348334 8.739276 NA 7.169420 12.200639 10.759633 7.343347 9.374969 9.136358 8.248372 9.278666 7.169420 7.565168 11.806407 7.810388 2.654848 7.836177 7.130442 12.283293 9.990875 6.976775 9.711678 12.517484 5.476848 12.178997 10.214907 10.492700 9.965784 11.925810 9.610704 10.136935 8.664476 1.169412 8.910995 4.095418 10.876434 7.526972 10.480487 10.410211 7.585585 13.398058 10.433863 9.536617 12.830575 11.284464 9.302819 6.355286 TCGA-AR-A1AQ 49 0 NA 3021 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 2 5 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 8.323135e-07 2.080784e-07 10.0083708 8.5246792 11.6447408 8.8249982 8.7334215 8.0940450 9.3125361 10.5402762 10.1203932 11.6726299 11.4197861 10.2642730 1.0469101 12.0981300 NA 9.4306252 8.8299193 8.5427761 6.9717332 6.6835463 1.3688242 11.2986993 6.2757390 9.5938156 10.9195959 4.8282812 -0.9531597 11.0584454 10.5904362 -0.9531597 9.3253704 7.8151053 7.2168458 7.7951137 9.0025709 10.7761169 9.0469210 9.7006618 9.4763278 10.7637405 4.1762031 8.6671410 14.2101776 8.1939989 8.8829713 10.7425843 10.1469263 3.7473659 -0.9531597 8.8670999 11.0577988 1.3688242 11.0658166 4.9295638 7.7508249 7.2218471 9.0441006 11.8694919 10.2342732 11.1842324 12.9663431 6.4731862 11.5633598 11.1568986 11.3452701 11.0658166 4.4044740 11.7523374 5.7748424 0.6318959 10.5787898 10.1606632 4.1766180 5.6616299 9.9118809 10.7197883 10.7997198 9.3665932 1.0469101 9.1475835 12.6396117 13.5524225 9.7024518 9.9111072 0.3692900 0.4764200 0.0499140 -0.3189600 0.0593620 -0.3617100 -0.4060300 -0.3499500 -0.3367700 0.3638800 0.3392100 0.3365100 1.7037000 3.0464000 0.0085532 0.0244870 0.0000000 0.2207800 -0.3585600 0.0317980 -0.3782400 -0.3748700 -0.3589100 -0.3589100 -0.3589100 0.0860250 0.0860250 -0.3848600 0.0439450 -0.0137740 0.3692900 0.0201420 -0.3072600 -0.3606100 -0.3628300 -0.3794600 -0.3794600 -0.3499500 -0.3367700 0.0595840 -0.3825100 0.0614460 -0.0914770 0.1982500 0.1982500 -0.3690500 -0.3616400 0.0674560 -0.3892200 0.0399820 0.0244870 0.0000000 0.0000000 0.2035900 -0.3585600 -0.3585600 0.0233650 -0.3782400 -0.3976600 -0.3872100 -0.3589100 -0.3589100 0.8088100 -0.3640200 0.5423400 0.0439450 0.0398410 -0.3859800 0.887 0.887 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.379 -0.379 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 0.000 0.887 0.887 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.379 -0.379 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 0.000 9.62717964 12.85618675 5.33232483 8.37335066 4.20234719 13.51050928 2.85427498 1.85427498 9.46688117 11.96466605 6.27573901 8.53476120 2.63187258 10.98245446 9.51859631 3.04692754 7.76459762 10.22993611 8.11569915 9.45099820 8.70409661 6.43923914 11.54202656 2.04691008 9.35412175 9.57439806 1.04691008 0.04697991 10.25515536 1.85427498 13.79747102 13.23697718 7.20173873 9.87426382 11.95475059 9.87426382 5.40447401 3.57048722 -0.95315975 -0.95315975 9.28293528 9.56950248 7.05254523 4.00111766 6.61776277 5.52265528 9.85427592 4.74736054 10.03915128 5.25637288 11.82602478 2.85427498 4.92956378 10.16667930 7.60212353 9.53073678 9.11569941 9.19539755 11.66530656 5.19666999 13.78400991 NA 10.80597702 NA 9.98134908 4.00111766 7.95681405 7.97173379 11.345574 9.523667 7.740408 12.098130 10.678603 11.094045 6.683546 7.201739 9.484673 11.393712 13.376998 11.488050 8.867100 8.083095 4.570481 7.439238 10.224341 10.630944 4.176203 9.487790 8.986500 8.970249 9.218098 7.811793 6.395649 11.419786 11.115028 6.705132 9.049736 9.171559 11.532750 10.407768 8.107617 9.731670 7.808473 9.697973 10.202511 9.046921 10.360938 10.479463 11.492195 10.396755 10.221847 8.982086 NA 9.658379 10.641712 11.065817 6.332323 11.214653 9.044101 7.373351 14.946585 11.119054 10.973958 12.115867 11.408317 8.774841 6.069290 TCGA-AR-A1AR 50 1 524 NA breast stage iiia t1 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 4 4 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 10.65813738 10.06565268 12.11383292 10.31777697 7.50117319 9.65990155 9.37796639 10.69129416 9.52508441 12.18516816 9.59360569 10.45949033 2.93770220 10.59198958 3.73838955 10.45314550 5.15342840 8.54860578 5.54574602 5.44293686 NA 11.69291064 8.43265213 8.48022755 10.64505917 5.26890593 -0.01654119 9.31554019 10.96667545 3.89039805 8.79246789 9.21051794 -2.01624935 3.47535731 10.20478875 11.77639561 9.79206567 11.04132623 10.39077149 11.47860917 -1.01654119 7.77140627 13.86722090 8.25573676 9.22310224 11.09170142 11.07063499 4.34105353 -0.43148140 10.18562748 11.27092752 -2.01624935 10.89227156 6.40976768 8.81560265 5.68394343 10.26224345 12.23372805 10.17610469 11.09104768 13.40198223 6.04959374 11.44472731 11.23674403 11.67175401 11.79628265 5.51488602 11.92244001 7.41604591 2.37581793 10.09887258 10.24265847 2.32550155 6.93187094 9.44395966 10.47510627 9.72749660 10.50215683 0.56842131 5.81005230 13.64422386 12.78379694 10.08153577 9.59129625 1.2921000 0.9604000 0.0224440 0.0147490 0.0546600 0.4517300 -0.4527600 0.0270760 -0.0031859 2.5673000 2.1102000 0.0252500 0.6066600 -0.4313800 0.0279630 0.0279630 0.0279630 -0.4311600 -0.4412400 -0.4512500 -0.5170200 -0.4194800 -0.4128900 -0.4128900 -0.4237500 0.0928950 0.0928950 0.0928950 -0.4113500 0.0520990 0.0203430 0.0172640 0.0000000 -0.4415600 -0.5353100 -0.4527600 -0.4527600 0.0270760 -0.0031859 -0.0625110 0.3230200 -0.8781300 -0.4369100 0.0199230 0.0199230 0.0199230 0.0406090 -0.8125200 -0.4232000 0.0287630 0.0279630 0.0188030 0.0188030 -0.4311600 -0.4353500 -0.4250600 -0.4427500 0.0099392 -0.4194800 -0.4812300 -0.4128900 -0.4128900 0.0876790 0.0049969 0.0928950 -0.4122300 0.0055432 -0.4040700 0.000 0.000 0.000 0.000 -0.435 -0.435 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 -0.435 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 0.000 9.08219376 12.40280554 4.26890593 8.31665896 3.88750577 10.45034493 3.34106065 -1.01654119 8.85232632 9.23498600 0.30544528 8.82270753 2.62735002 11.42761267 9.28041980 -0.43148140 10.98279904 9.64750646 6.59452914 7.87224701 8.34942145 8.33444269 10.80487904 4.72497217 8.33885491 9.57549349 3.76486628 NA 9.73462919 2.68394343 13.35156673 12.51956874 7.70460296 10.19903673 10.19051795 9.32668946 3.40977108 2.79085543 -0.43148140 -0.43148140 7.79407530 6.91424160 7.33001783 5.29638766 5.76230363 4.19295951 9.92784965 4.07096457 8.85848492 2.15341624 11.88153814 4.09202980 3.79085543 10.71762690 6.21745951 4.17332735 9.76609239 9.34873258 4.59821631 0.30544528 13.35932373 -0.01654119 9.91940534 NA 10.68199128 3.91423921 8.53232553 7.86614700 13.582283 8.718213 9.310495 10.591990 9.964636 10.188380 5.442937 8.215925 9.712275 10.787231 14.512339 11.998657 10.185627 7.518779 -1.016541 7.153428 10.982094 11.506698 2.683943 9.527019 8.523632 9.693449 9.947967 6.731696 5.960783 9.593606 9.716943 3.027897 5.202672 8.821723 12.312739 10.984736 8.630062 7.294116 10.614226 7.271216 10.990853 9.792066 10.554071 9.876426 11.997611 10.735675 11.485714 10.041157 -1.016541 9.273367 6.000311 10.892272 8.244423 11.503438 10.262243 8.317777 14.661512 10.828209 11.323215 12.581498 10.763838 10.602119 2.568470 TCGA-AR-A1AS 54 0 NA 1150 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 asian NA 5 5 2 3 3 1 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 4 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 4 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 3.467973e-07 9.7743451 9.3356257 11.6856300 8.9027164 8.5247478 8.9094866 10.0606789 10.0533617 9.6673727 14.2900165 10.4772361 10.9094865 -0.1512018 12.7212731 1.8487982 9.1202537 5.8260705 7.7129768 9.1639402 13.0281555 0.8487982 13.5654493 2.8487982 9.2486027 11.5383519 8.3703910 -0.1512018 8.3061715 10.6309698 -1.1513620 7.3000020 7.8232054 NA 3.3082152 9.6927117 10.9783956 9.5750088 13.3061715 9.7541777 10.7613057 7.0237167 12.2614928 14.4140415 7.8638988 9.1718453 10.4365681 10.8145749 4.7314331 1.4337607 8.8835897 11.0612870 NA 10.7876350 2.4337607 4.0967173 4.7556834 10.1185017 11.8806641 10.4912936 12.2284397 12.8223983 8.4524171 11.0597663 10.3184324 10.7920380 11.0551945 4.4033768 12.8487906 10.3255369 1.8487982 10.2994863 8.8102403 2.0187054 5.3082225 10.9135334 10.7743450 10.1964119 8.8794577 0.8487982 10.9050896 13.6624716 11.9661090 10.2581816 9.2411080 -0.00664320 1.35170000 1.38040000 0.59371000 0.57773000 -0.02767100 0.01894300 0.02146300 0.02146300 -0.71737000 0.05893700 0.04996600 -0.05394200 -0.04874800 -0.05239600 -0.05239600 -0.05239600 0.00291330 0.00291330 0.01242000 0.00000000 -0.04482200 -0.72367000 0.02020300 0.02020300 -0.05345000 -0.05345000 -0.05345000 0.06923900 0.00055459 -0.00664320 -0.12108000 0.59371000 -0.02767100 -0.02767100 0.01894300 0.01894300 0.02146300 0.02146300 0.02146300 -0.08320000 -0.06759200 -0.71737000 -0.02671400 -0.02671400 -0.02671400 -0.02671400 -0.04874800 -0.04373700 -0.05239600 -0.05239600 -0.05239600 -0.05239600 0.00291330 0.00291330 0.00291330 0.01242000 0.00000000 -0.04482200 0.01754400 -0.72367000 0.02020300 -0.03544800 -0.02479800 -0.05345000 0.06923900 0.02454800 0.00263570 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 0.000 7.4262195 13.2295898 3.9362516 8.7268414 NA 10.7765686 -1.1513620 -1.1513620 8.7810052 8.2107342 NA 6.9336517 2.7556781 10.2297927 9.1514296 3.3082152 4.1707183 8.8863377 9.8501989 10.3560898 9.7792840 6.8145748 10.0262101 3.2035301 9.8109636 10.0367612 2.5492256 NA 10.0299428 1.4337607 13.0767825 12.3961672 7.0582440 9.7661626 6.7067723 9.5578743 4.3082225 -0.1512018 -1.1513620 2.8487982 8.4505613 8.0800116 9.7971578 2.1707263 9.3454248 6.5212157 9.7743451 5.0386162 9.4989449 -0.1512018 10.8257127 0.4337073 1.4337607 9.7365215 7.5790232 -1.1513620 8.6235776 6.3879501 2.1707263 4.7795276 14.1036347 -1.1513620 10.5247477 NA 8.4393775 3.7556781 7.5733048 8.9832168 12.698854 6.348636 8.751166 12.721273 10.316906 11.578199 13.028155 12.387101 9.374311 10.642800 13.294969 10.434223 8.883590 9.262419 1.848798 7.124915 10.834633 11.1659205 8.0824104 9.1341927 8.8945504 9.1875270 9.7146321 6.1616741 8.5492302 10.4772361 5.4781467 -0.1512018 9.2205672 7.6610320 9.2886216 10.0594620 8.8403125 8.0967183 11.5205528 1.8487982 10.6455765 9.5750088 10.1479986 10.0836080 10.9780736 9.6879944 10.5348534 8.9256061 NA 9.5300641 1.6561302 10.7876350 6.6103413 10.4081677 10.1185017 7.4598152 14.2108029 10.5608876 10.5414061 13.2017306 10.5969835 9.4653395 0.4337073 TCGA-AR-A1AT 62 1 1272 NA breast stage iia t2 n0 m0 female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino 6 3 NA 2 1 6 2 2 4 1 1 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 10.68559620 9.32827123 11.27855905 9.08005295 8.52382224 9.08556992 10.33117694 9.48781713 10.63051951 8.97398774 10.92828008 10.21642528 0.63710012 17.58485282 3.37407963 9.86352161 5.09654018 8.29532079 9.68967743 12.92039067 1.63710012 13.14060386 6.73864761 9.35954116 10.79445632 4.00634291 NA 11.14663696 9.89135068 2.95902822 8.43152518 8.33291779 NA 5.54400000 9.78091766 10.45515890 8.80536372 10.81245097 10.17173650 11.26798318 3.57571168 9.90233366 14.34313764 7.48831737 10.94620668 10.86111103 11.13662309 4.63711172 0.63710012 8.81701849 12.76767991 1.05213762 11.14919133 5.42718711 7.04649979 5.33755055 10.64553802 11.68559624 9.94393055 12.00106155 12.77367332 8.28096559 10.86392289 10.03696399 10.92828008 10.44446426 4.69600494 12.48651445 9.28696429 0.05213762 10.09449024 8.89606776 3.12424541 7.08005322 10.69960525 10.02225281 10.54199478 9.45089059 2.05213762 11.35364303 13.57852383 12.68945098 10.26038116 9.26038116 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.18014115 12.08711771 6.32827101 9.19041856 4.75258805 11.28995432 3.51158189 NA 8.86753019 7.14490394 NA 7.05259739 3.05215502 10.40198099 9.00197362 3.44446830 8.27614861 9.84575018 11.07139009 10.24751909 9.54247630 6.96503620 11.41024855 3.13961683 9.95150373 9.90076977 0.05213762 NA 11.30747053 2.51156924 13.29524644 12.28531711 8.26646611 9.93096407 10.93593563 9.48155365 4.93479011 3.05215502 NA 3.44446830 9.00197362 9.20189405 10.29769961 1.85949255 9.60166198 7.05214632 9.74824502 7.59517840 9.83022394 NA 9.75345328 3.95903750 3.37407963 9.45027058 5.76968712 6.77324604 9.71837087 9.27614861 9.19041856 0.05213762 13.82852848 1.63710012 9.85627783 NA 9.71035841 5.44446499 7.21705425 9.28336807 12.609759 7.160671 7.900770 17.584853 10.411896 10.311302 12.920391 11.222385 9.160031 10.728545 13.385093 10.940510 8.817018 6.659477 2.752577 7.237023 11.545001 11.332628 6.096540 8.838416 8.780067 9.213279 10.011178 7.803691 5.934790 10.928280 6.222072 1.374066 9.463658 7.897292 13.607215 10.430442 8.110139 8.754320 11.002338 7.017931 10.146165 8.805364 10.243206 10.344468 10.985838 10.207598 10.576199 9.254271 1.374066 10.219051 7.800340 11.149191 7.465775 10.761976 10.645538 7.710358 14.065993 9.469999 10.208230 13.196327 11.264947 9.404190 2.752577 TCGA-AR-A1AU 39 0 NA 2868 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 2 2 2 6 2 2 3 4 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 10.5126724 10.4229542 12.1493587 9.9573283 7.8850807 8.8240795 10.2804577 10.0276916 10.1110784 14.1363593 11.8569534 10.9534994 -1.4096615 12.7852166 3.5446585 9.5432010 7.0903051 8.3453471 8.8595863 12.3788722 4.8192799 13.4116856 4.9998512 8.4343809 11.3887290 8.3848757 NA 10.7901658 8.7055035 2.3978030 8.6142140 7.7678792 0.1754288 4.0498921 10.0893089 10.3836566 9.2716981 11.2672983 9.8460785 11.6319478 10.2257244 10.8534354 15.4341477 8.9372505 10.0035587 11.4449386 10.8072056 4.4731050 6.0982553 9.3158259 11.8303565 NA 11.2806760 5.2628841 5.1903739 5.1603152 10.0570461 12.3331902 10.4623649 12.2892729 12.9950026 8.7852167 10.9646842 10.5262104 11.5468359 11.5761238 5.6672762 12.0811852 13.0731416 NA 10.5798543 9.2611159 3.9123912 5.2051696 10.2562397 10.4134288 10.4719561 9.6135210 4.6565479 8.5167559 12.8569535 12.2405017 10.4122337 9.3192307 0.00586770 0.00670210 -0.01405400 -0.00305350 -0.00508610 0.00148070 -0.02100400 0.49498000 0.49308000 0.44770000 0.44770000 0.89814000 0.00000000 0.00142350 0.44974000 0.46968000 1.34690000 0.00253360 0.00253360 -0.00218020 0.00531170 0.00531170 -0.48184000 0.00798940 0.00656300 -0.00425630 -0.00425630 -0.00425630 0.44889000 0.00392220 -0.46000000 0.00128480 -0.00305350 -0.00167870 0.00128480 -0.47646000 0.00086866 -0.49556000 0.00128480 -0.50232000 0.00524160 -0.00411790 -0.01006100 -0.00287250 -0.00287250 -0.00287250 -0.00037916 0.00142350 0.00142350 0.44974000 0.46968000 -0.47783000 -0.47783000 0.00253360 0.00253360 0.00253360 -0.00218020 -0.47636000 0.00531170 -0.00148940 -0.48184000 0.00798940 -0.00134910 -0.00425630 -0.00425630 -0.50004000 -0.93480000 0.00406110 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 0.000 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 0.000 8.9213765 14.2645416 9.1782373 10.5544395 3.2343174 10.9311444 0.5904344 2.3978030 8.4343809 9.9827772 3.4973441 9.0012821 4.6779197 10.0544948 9.4920809 2.5904583 8.2575712 9.4499944 12.6420085 10.2553514 9.5772190 7.8360125 11.0122616 2.5904583 9.8718102 10.0631506 4.7402044 -1.4096615 10.5684550 3.6348488 12.3351885 12.2463258 8.1922307 10.0256090 8.2288956 9.2079272 5.7402071 1.5904823 1.1754288 1.5904823 8.1622126 9.7338429 9.7357550 6.8804786 9.5392065 6.3386526 9.6686106 6.8192786 9.6369017 0.1754288 10.9380811 2.9827837 4.5211953 9.6535717 6.5427347 4.9123864 8.9425031 7.6321191 10.8102333 0.5904344 13.7622620 0.9124199 10.9771306 NA 7.3386526 5.7402071 7.8850807 8.7703689 13.515133 5.219815 8.488305 12.785217 10.122328 10.466977 12.378872 12.382538 10.207808 10.955415 13.421866 12.691779 9.315826 7.074275 NA 6.939188 11.719904 11.5147155 6.6457420 8.7197427 8.5648743 8.6858568 10.3437809 6.1829167 7.3783625 11.8569534 6.0083121 3.5446585 6.9123876 8.0762892 12.6516621 9.9843864 9.2522378 9.4631346 11.4905718 5.4106396 13.5545704 9.2716981 9.7913583 10.3222030 10.3243224 9.9061754 10.6746037 9.1286486 2.9123816 8.8395257 6.8096280 11.2806760 6.7197434 11.0980066 10.0570461 7.0250875 13.4610652 10.2795841 9.6280067 12.7178092 10.8195789 9.5627215 0.9124199 TCGA-AR-A1AV 68 0 NA 1864 breast stage iib t2 n1 m0 male 2007 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 7 2 3 2 3 1 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.733986e-07 10.5937163 10.7391986 12.1274774 10.3195163 8.3521189 9.0492158 10.6707240 10.6960929 8.8903716 14.4978507 11.7098580 11.2598606 0.5319678 13.2083821 3.8824376 9.0117204 5.1872927 8.1525267 10.6648254 13.4054489 1.9104641 13.3056975 NA 9.3321930 10.7108539 5.7018651 NA 11.1014161 11.4913626 3.1642070 6.2489314 6.9815011 -0.7901100 4.3597601 9.7242330 11.0393384 10.7945049 10.9111019 10.6550269 12.1181232 -1.7898605 12.1073849 14.5762831 10.0727618 9.3113246 12.1467420 11.7246029 3.9913722 5.5937153 9.4703437 11.2739127 -0.7901100 10.8113186 5.1048315 5.3597601 4.8682225 10.6681623 12.0444831 11.1422268 12.0939918 13.1354274 8.2198408 10.3139555 10.1506450 11.2114203 11.3891437 5.5937153 11.5742835 10.2170393 -0.2050643 9.9186649 9.0857614 3.1688506 5.1407500 10.9415432 10.7850785 10.7569065 9.9004466 1.6694350 8.6278647 12.0293929 10.9542152 10.1897945 9.1429650 0.9990400 1.2796000 1.2796000 -0.0354480 -0.0354480 0.0000000 0.3678900 0.3461600 0.3461600 -0.0094046 -0.0094046 -0.0094046 -0.0284910 -0.0284910 -0.0114730 3.1177000 -0.4299600 -0.0457700 0.6605000 0.0102750 -0.0310860 0.3375200 0.1971000 0.1971000 0.1971000 0.2451300 0.2451300 0.2451300 0.3254300 -0.0586630 -0.0273980 -0.0099565 -0.0354480 0.0000000 0.0000000 0.5327400 0.5327400 0.3461600 0.3461600 0.3461600 0.3395900 0.3460000 -0.0094046 -0.0271240 -0.0271240 -0.0271240 -0.0271240 -0.0284910 -0.0284910 -0.0114730 -0.4603500 -0.4299600 -0.4299600 -0.0457700 0.6584800 0.6584800 0.3412800 -0.0310860 0.3772600 0.3399900 0.1971000 0.1971000 -0.3919300 0.2451300 0.2451300 0.3254300 0.3408000 -0.4528900 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 0.140 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 0.140 8.0060517 13.1615245 4.5137939 9.3692527 3.1609524 10.9300425 -0.2050643 NA 8.2406793 7.6320770 NA 7.9237939 1.0173518 10.0964707 9.2968118 1.7949772 7.1786788 9.6658530 5.9242567 10.0003606 10.0135943 8.5023338 10.9169397 2.4579357 10.1191551 9.3386508 2.5319428 0.5319678 10.2509867 3.3392942 11.6516595 12.0227910 7.6998597 10.3208216 6.9615562 9.1887226 2.8538759 1.2100147 -0.2050643 3.2544126 8.4697554 7.8664370 9.8370899 2.5319428 9.3510781 5.6857468 10.1598388 5.7413942 9.3942676 NA 11.4693140 2.2100147 8.6857454 9.8202942 7.0265157 -1.7898605 8.9242576 8.0092934 4.3185338 1.3799536 13.5612619 -0.2050643 10.8724580 NA 8.4543758 4.4388318 8.0397350 9.2399894 14.579923 5.419465 8.626810 13.208382 10.365779 11.352917 13.405449 13.084321 8.994647 11.726943 13.336878 10.079220 9.470344 9.094182 1.379954 7.023793 12.029792 11.0691586 7.5409293 8.8744595 8.9607190 9.5426080 10.4324809 6.0987543 10.1127640 11.7098580 6.7607585 -1.7898605 4.8824376 8.2317833 12.0840328 9.4460262 8.6172797 7.7569065 11.9361238 2.2974849 11.2414703 10.7945049 10.1685648 9.0492158 11.1885438 9.7940350 10.9991381 9.4685780 -0.2050643 9.2358230 1.6694350 10.8113186 8.2720582 10.4642908 10.6681623 7.4603101 13.0898346 10.2149348 9.4994547 13.2515429 10.5506967 9.3126438 0.5319678 TCGA-AR-A1AW 65 0 NA 2632 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 2 4 2 2 1 4 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 10.968783 10.097670 11.964692 10.192615 8.495669 9.949315 8.858743 10.345177 8.995498 12.179730 10.611146 10.882359 4.270252 12.335599 3.455807 8.663913 6.575104 9.796882 8.730966 12.253131 NA 12.859992 4.430713 9.805747 10.821222 4.845751 -1.402016 11.398521 9.119424 2.057242 8.883226 6.690581 -1.402016 7.757695 10.164829 10.063900 9.979907 10.764928 10.419199 11.846492 1.597841 10.998703 14.688122 7.996011 8.980448 12.178200 11.579748 5.480465 4.528559 9.840998 11.389393 NA 10.927900 6.398723 9.305183 5.777733 10.449182 11.976389 10.306476 11.348740 13.226383 7.427547 10.704387 10.294074 11.389597 11.403164 4.919750 12.145200 10.928460 NA 10.103139 10.149532 4.728345 8.005091 11.384297 10.337604 10.276864 11.121386 8.071529 7.280818 12.583843 12.766496 10.102643 9.079623 -0.12356000 0.37545000 0.37545000 -0.00041585 -0.00041585 0.04499900 -0.01876500 0.06446200 0.06293700 -0.18949000 -0.18949000 0.94078000 0.19375000 0.19375000 -0.19325000 -0.14652000 -0.14652000 -0.05091100 -0.05091100 0.12859000 0.14803000 -0.19088000 0.17272000 0.17272000 0.17272000 0.49147000 0.16460000 0.16460000 0.12992000 -0.12356000 -0.12356000 0.00000000 -0.00041585 0.04499900 0.04499900 -0.01876500 -0.01876500 0.06446200 0.06293700 0.06622900 0.07067300 0.16355000 -0.19525000 -0.10592000 -0.10592000 -0.10592000 -0.10592000 0.19375000 0.19375000 -0.19325000 -0.14652000 -0.14652000 0.60666000 -0.05091100 -0.05091100 -0.05091100 -0.23408000 -0.09604400 -0.18496000 -0.19960000 0.17272000 0.17272000 0.44562000 -0.20523000 0.16460000 1.53990000 -0.31949000 -0.07107100 0.194 0.194 -0.147 -0.147 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 0.000 0.194 0.194 -0.147 -0.147 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 0.000 10.7608443 12.2885855 8.7826988 9.2088484 7.0109018 10.4168051 7.6034483 -1.4020160 8.6971712 5.8266425 NA 8.2396043 3.4558072 10.1524124 10.0034970 5.1676791 12.0956754 9.7752432 9.6793070 8.7488402 9.1349158 8.5388710 9.2317269 2.5978172 9.0177839 10.0402488 4.4307135 NA 11.2228474 2.9901380 12.7001274 12.0403784 7.1638781 10.3270195 10.9315380 9.3214846 5.7576954 3.7677501 0.9197596 1.4051755 10.0407671 9.7507422 9.6435833 5.2843253 6.6537021 5.7876492 10.7608443 6.8266425 9.6965136 -1.4020160 11.1778466 5.0896761 4.2982624 9.1899908 5.0392744 10.6267656 10.0013682 10.7922727 11.8531473 0.5977934 13.2622153 2.0572423 10.2312729 -1.4020160 9.0438730 6.6312469 7.5166865 8.5650499 10.905175 6.603448 8.781459 12.335599 10.282572 10.327869 12.253131 11.189112 9.241680 11.443706 13.617154 11.764301 9.840998 8.393863 1.767740 8.073557 10.869870 10.993893 6.392240 8.769000 9.376722 9.132126 10.346591 10.028276 8.254248 10.611146 5.007213 3.405176 8.280818 8.409134 10.223989 11.437815 7.486567 7.462010 12.510339 10.819411 11.718667 9.979907 10.633654 10.023564 11.121631 10.049550 10.735455 8.592177 4.325746 9.853094 11.730323 10.927900 6.227181 11.202015 10.449182 8.055204 13.428251 10.067465 10.564689 13.111551 10.804228 9.965784 6.711565 TCGA-AR-A1AX 64 0 NA 2629 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 7 2 2 4 2 4 3 4 2 2 NA NA 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 10.842582 10.187787 11.912872 10.261624 7.967420 9.810444 10.231543 9.753447 10.202212 12.549201 10.687837 10.574012 1.918653 14.975738 4.088583 8.857652 7.258510 8.870528 7.503623 12.230863 3.181691 13.151261 7.080548 9.094584 11.166113 6.539247 -0.403351 9.614932 10.877793 4.378095 8.697395 7.279727 -1.403160 5.269157 10.791797 10.307539 9.372343 11.880544 9.921475 11.839013 7.006123 9.774775 15.045671 8.182896 9.900502 11.470753 11.088335 5.166587 1.404086 9.354122 11.980976 -0.403351 10.915840 6.269158 8.141697 4.882134 10.666853 11.595499 10.037601 12.281262 12.940404 6.591085 10.838120 10.490785 11.309904 11.581685 5.416911 13.165282 11.315265 -0.403351 10.083065 9.962508 3.994190 6.877503 10.669200 10.196180 10.467097 10.880399 10.270041 9.677550 13.026139 12.565039 10.028230 9.075502 0.08744200 0.08744200 0.08744200 -0.00133600 -0.00133600 -0.00230550 -0.00189000 -0.00175150 -0.00175150 -0.17115000 0.71259000 0.76952000 0.00102050 -0.00161300 -0.00046438 0.01479900 0.01479900 0.00282450 0.00282450 -0.06450400 -0.19270000 0.19974000 -0.12468000 1.30660000 0.03924600 0.19335000 0.19335000 0.19335000 0.00074316 0.08744200 0.08744200 0.00000000 -0.00133600 -0.00230550 -0.00230550 -0.00189000 -0.00189000 -0.00175150 -0.00175150 -0.00175150 -0.00050458 -0.00098241 -0.17115000 -0.01047100 -0.01047100 -0.01047100 0.00476890 0.00476890 0.00337980 -0.00046438 0.01479900 0.01479900 0.01479900 0.00282450 0.00282450 0.00282450 0.00102050 -0.19270000 0.19974000 -0.19510000 -0.12468000 0.03924600 0.00741090 -0.17292000 0.19335000 0.00074316 0.14197000 0.00796760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.258 0.000 10.7669703 11.9801666 7.5006141 9.8303520 6.4609178 10.5047496 6.9498792 NA 8.5096214 9.2468864 0.5967444 7.9602539 1.9186534 10.5226575 9.6533700 3.5036286 10.6232557 9.1134171 10.1045269 10.4504317 8.9348446 7.6493000 10.3665701 3.8061900 9.1994311 10.2976054 3.6841904 NA 11.2634001 2.8446669 12.7945633 12.1882546 8.3976323 9.6329060 10.7382008 9.2779708 9.9354686 1.5967444 0.5967444 1.9186534 8.5639585 9.1045269 10.3144087 4.3246522 8.5438141 6.0805489 9.6016549 6.0561630 9.1722715 NA 11.2647308 4.1513231 4.7666588 9.2465632 6.0881840 7.9825949 9.9209129 8.9310055 8.9354686 NA 13.3738335 2.5967205 10.1339507 -1.4031602 8.2441907 6.0145852 7.5711466 7.9209126 11.913523 6.619100 8.479375 14.975738 10.182634 10.457431 12.230863 11.871110 9.195399 11.231770 13.123170 11.288476 9.354122 8.247784 1.918653 7.442222 10.729553 11.312480 6.652015 8.652015 8.860002 8.445355 10.491683 9.397632 7.761639 10.687837 7.018797 1.918653 5.980437 8.057168 12.114402 11.068915 7.969597 8.871693 12.218097 9.008243 11.929169 9.372343 10.294134 9.812872 11.193854 10.579013 10.830951 9.728589 8.755342 10.071371 9.479375 10.915840 6.766657 10.773834 10.666853 7.769235 13.488990 10.107002 10.537780 12.687176 10.166588 9.756604 3.726014 TCGA-AR-A1AY 65 0 NA 1026 breast stage i t1 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 5 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.144431e-06 3.467973e-07 10.5792198 9.6567845 12.4997199 9.5009092 8.0412950 8.1460523 8.6402739 10.1761435 11.4999945 13.2104370 10.3688458 10.3149376 0.8774302 11.6716469 2.7253922 10.4250592 6.9520703 8.3531270 8.5023716 5.4979795 NA 9.7854858 7.5778336 8.9743721 11.3480524 4.6847458 2.7253922 7.7697843 11.3700479 2.8033924 9.8586754 7.4653582 -0.4445765 3.7253922 9.4540669 10.8500862 9.0573027 10.7791656 9.7926755 11.8629509 0.5554235 8.3915160 15.8925821 9.5437596 9.4009554 11.1404280 10.5437951 4.0148998 -1.4445765 9.7483747 12.0940182 -1.4445765 8.4817615 4.5096642 7.0433051 6.4134468 7.8269285 12.1579324 10.7288303 12.5582805 12.5460126 5.0632613 11.3337480 10.9563876 10.7794671 11.3810206 5.8033924 12.2083104 10.3780363 3.3628205 10.3178475 10.5754036 4.1479253 4.0148998 8.4935749 10.9168610 10.8572474 10.3748463 2.6429326 6.0790282 12.4545391 12.2383503 10.1655675 9.8187346 9.1490e-01 1.1778e+00 4.5726e-01 5.6438e-02 6.5928e-03 -6.7256e-01 4.4638e-01 6.7539e-01 1.3958e+00 7.9842e-03 6.3256e-01 1.6227e+00 1.1304e+00 -6.8592e-01 2.1250e-02 1.3280e-02 1.3280e-02 8.2626e-03 6.6398e-05 4.9616e-02 -6.8984e-01 -1.5951e-02 -7.0635e-01 -6.6823e-01 -3.9314e-01 -4.5028e-02 -4.5028e-02 -4.9630e-02 6.3837e-01 -7.0904e-01 3.3899e-02 -6.7534e-01 2.1047e-02 -5.7478e-03 -6.7256e-01 -6.7724e-01 -6.7724e-01 8.2626e-03 1.4257e-02 -1.8375e-01 2.1946e-02 7.7058e-03 6.2578e-01 6.6059e-01 -6.8533e-03 -6.8100e-01 -6.8100e-01 -1.0020e+00 -7.5066e-01 2.4756e-02 2.1470e-03 1.3280e-02 1.3280e-02 6.6398e-05 6.6398e-05 6.6398e-05 -6.5515e-01 -6.8984e-01 -6.8711e-01 1.1467e-02 -7.0635e-01 -6.6823e-01 -5.4713e-03 -4.5028e-02 -4.5028e-02 -7.1297e-01 3.9263e-02 -1.5752e-01 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 -0.194 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 -0.194 7.0271408 13.2012364 5.7153361 8.7489908 2.1404188 11.7986394 1.5554726 1.1404515 8.6937371 8.4072146 5.5998593 8.7187377 3.0148908 10.2074140 9.6594089 2.8773909 7.0352456 10.8310080 5.0946246 8.0087362 8.8516703 8.0553112 10.7818776 0.8774302 10.3895414 9.7285178 2.0148908 -1.4445765 9.8245921 7.5441500 12.3579818 12.3550506 6.8315897 9.8175603 8.0473186 9.8251766 6.8818946 2.3628065 1.1404515 NA 8.4638582 9.3120218 7.4040882 2.2558935 8.7926156 4.1404269 9.3351849 8.0332237 9.8728780 0.1403860 13.5122953 3.6429326 7.0352456 10.0383943 7.9064710 2.0148908 7.7452898 7.5943843 3.6429326 8.2748543 13.4426384 -1.4445765 11.3756444 NA 9.6769990 1.8773909 8.3219944 6.0553106 12.160179 9.425830 7.561090 11.671647 10.329429 11.670346 5.497980 10.236264 9.484724 11.338054 12.890926 11.655635 9.748375 7.010792 5.388355 7.626927 11.987746 11.019756 7.170175 8.840868 9.803393 9.500177 9.697700 4.621554 6.994257 10.368846 9.691816 5.868348 8.818735 9.967908 12.790133 10.937819 7.661374 8.477307 9.897540 3.725392 10.831171 9.057303 9.479536 10.333543 12.131832 10.132894 10.471345 10.243716 NA 10.172024 4.110054 8.481761 8.071165 9.912468 7.826928 7.808131 13.550275 9.722884 10.181174 12.550526 12.378136 8.826928 0.140386 TCGA-AR-A24H 65 0 NA 4894 breast stage iia t2 n0 m0 female 2001 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 4 2 NA NA 1 2 1 1 1 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-06 7.976338e-07 10.5927657 10.0415173 8.3255838 8.5451259 9.8979005 8.6627503 10.5349524 10.2180634 8.9115954 12.2469511 12.0745917 10.7784190 4.1482996 13.4859176 5.4317500 8.9630888 4.9337898 8.9268916 9.4900193 13.3242063 0.9003355 13.8041794 1.4853238 9.0713698 11.5125455 5.9171763 -2.0997418 8.3253846 9.6291389 2.1482834 8.0244892 5.9664582 2.9878302 3.1482996 10.3656794 10.6888826 9.5338176 10.7415394 10.4874424 11.6935650 12.9157396 10.8945448 13.3107201 8.3316985 10.9821844 12.1469603 12.1855536 2.2926934 0.9003355 9.5347254 9.9881625 NA 11.0113408 5.6008079 6.4356436 5.8251801 8.6060006 11.6856163 10.1924022 10.9889908 13.3749930 7.6435193 11.2568201 10.9622186 10.7661014 10.8063192 4.6552545 12.1732166 8.9261999 -2.0997418 9.0702933 9.7948070 3.7092686 6.0399192 7.5990730 10.7181513 10.8842524 10.1822981 1.9878302 6.7799517 12.4442458 11.0070946 9.6085899 9.0062767 0.412520 0.154190 -0.367210 -0.268360 0.159720 0.156340 0.147480 0.185010 0.453330 0.123060 0.123060 1.671400 0.598290 -0.216960 -0.298340 -0.298340 -0.298340 0.452510 0.066863 1.060200 -0.260490 -0.098625 0.125710 0.763780 0.763780 -0.655620 -0.228170 -0.228170 0.544960 -0.676060 0.780880 -0.237350 -0.632970 0.305280 -0.942140 0.000000 0.000000 -0.691840 0.093828 0.582630 0.404180 -0.688930 -0.724160 0.100220 0.799700 0.072335 -0.215470 -0.216960 -0.681280 -0.689480 -0.298340 -0.692020 -0.692020 0.452510 1.403100 0.691910 -0.065390 -0.241750 -0.399140 -0.694100 -0.677890 0.763780 -0.284600 -0.219430 -0.228170 0.166620 0.061032 -0.690930 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 -0.295 -0.185 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.000 0.000 0.116 -0.065 -0.717 -0.594 0.100 0.100 0.408 -0.524 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 -0.295 -0.185 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.000 0.000 0.116 -0.065 -0.717 -0.594 0.100 0.100 0.408 -0.524 7.9583601 10.9843460 2.9003742 8.1171142 2.8922356 9.8794361 1.4853238 NA 8.6585914 5.9059934 NA 8.0310930 2.2926934 10.4175454 8.9838475 7.2177803 9.1303886 10.3972220 5.5798469 10.6768012 9.8736888 8.4424327 9.6623348 1.7077015 7.9502164 8.6535849 2.6008168 NA 10.5921116 -0.0995872 11.8946332 11.5480514 5.8428833 10.3224329 11.3366893 9.3720434 6.1339888 1.9878302 -0.5145732 8.2883853 6.7921513 8.4462980 10.6894942 3.3266380 3.8638394 6.6077268 10.3355175 8.1363821 10.3735665 -2.0997418 9.7458582 3.8776461 3.4549523 9.3906877 6.6072090 3.7830061 7.8890531 8.8883426 8.2155180 -2.0997418 12.8276369 -0.0995872 10.0808989 NA 8.5021388 3.6817304 7.0450268 8.8132576 8.679258 7.744289 8.329775 13.485918 11.091964 10.538351 13.324206 13.867279 9.398155 11.382168 12.429799 13.187864 9.534725 7.611175 3.681730 8.773812 12.245635 10.634019 7.723735 9.172998 10.029973 10.656507 10.801401 6.190388 3.707724 12.074592 9.035436 0.222310 4.911596 8.628561 9.322959 9.881935 9.778036 8.710940 11.313070 5.770734 12.388435 9.533818 10.090193 9.961739 12.608698 8.805755 10.880329 9.052653 2.148283 8.651444 5.318219 11.011341 5.801234 9.666069 8.606001 8.073021 14.168050 9.868315 9.673507 12.304911 10.131589 10.048527 2.070286 TCGA-AR-A24K 46 0 NA 1548 breast stage iia t2 n0 m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA NA NA 3 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 11.9825434 10.0904314 12.5645337 9.7722908 8.6075696 8.6609297 10.8319020 9.9683265 9.7756814 12.7064346 11.2644564 10.5823451 0.2336427 12.7105529 5.0537978 8.3525577 7.7939498 8.1524801 10.1569444 13.3661166 -0.7663573 13.7494707 6.6930478 9.6113696 11.7102365 6.1819851 -0.1814766 7.5756913 9.6619770 3.3629047 7.5911685 8.2545969 NA 2.5555462 9.9201174 10.4848034 10.3538548 11.8010977 10.3846334 12.5928860 7.8556690 12.5697747 14.3997603 8.0419214 9.1591713 10.0121048 12.0007668 4.8335277 4.5004005 9.6546298 10.7359515 NA 11.5805460 6.3628994 4.7254685 5.7254712 10.4666373 12.1562942 10.8602385 13.8992304 13.1403666 6.6344960 11.8476365 11.5178771 11.9217579 11.8901534 6.1702556 14.0388317 12.5534301 -1.7666027 9.7703497 9.2187473 3.6659044 4.4234437 8.4010348 9.9733975 10.7891646 9.9139763 -0.7663573 8.4147689 11.7718058 11.4138369 10.3789122 9.1001230 1.16810 1.18970 1.24200 0.19695 0.20060 -0.18156 -0.19087 -0.21948 -0.21948 -0.20112 -0.20112 0.92594 0.20503 0.20503 0.17886 0.17136 0.17227 -0.19725 -0.19725 -0.61508 0.82745 0.20231 0.15282 0.15282 0.15282 0.16385 0.16385 0.16385 -0.19262 0.20060 0.19033 -0.18484 0.19695 -0.18156 -0.18257 -0.19087 -0.19087 -0.22367 -0.21948 -0.21948 0.20030 0.20228 -0.20112 0.20580 -0.61037 -0.63102 -0.63840 0.20503 0.20503 0.17347 0.17136 0.17754 0.17754 -0.19725 -0.19725 -0.19725 -0.61201 -0.64696 0.21361 -0.65716 0.16055 0.15282 0.21514 0.16385 0.16385 -0.19944 0.19866 -0.65071 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.615 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 0.000 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.615 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 0.000 8.0166150 11.8611507 8.0473982 8.1101340 3.6598789 9.5745797 -0.7663573 NA 9.4521801 7.8279416 NA 7.0051069 0.8186052 10.3057494 9.6551557 3.3629047 5.8409466 9.3230674 8.7688923 10.4237502 9.3103056 7.6930485 9.1805231 1.9340635 9.1032107 8.7910805 5.2223023 NA 9.8989528 2.6930520 14.1803176 12.1625053 7.0051069 10.1109010 6.8483262 9.1636150 4.1405087 0.2336427 0.8186052 4.7727777 8.7144070 7.6806999 10.5100321 1.9340635 7.6189830 6.3473592 10.8709210 7.0247795 9.6323606 NA 10.6819913 2.1405169 3.6598789 10.2529991 6.9575850 2.1405169 7.2943129 5.4910033 3.1405006 NA 14.0317089 -0.1814766 9.9401129 -0.1814766 8.5316793 1.8185643 8.1702546 8.0931518 14.514841 5.913098 8.519019 12.710553 9.449787 11.681991 13.366117 13.372489 9.776649 11.050401 13.403698 11.849017 9.654630 8.577913 3.091598 7.580130 12.154621 10.2649735 8.4197310 9.9108960 8.9843239 9.9839051 9.5720580 4.7882054 2.4035404 11.2644564 5.8702414 3.3629047 6.2725365 7.7655440 11.8878053 9.2821038 10.2684158 7.9078094 13.7475603 3.6598789 13.2534908 10.3538548 10.1502428 10.0125153 11.6580456 9.2080314 10.4044808 9.7991950 4.0665112 8.0869419 3.6930520 11.5805460 6.8446417 9.8246716 10.4666373 8.4185294 15.1321474 10.7780984 10.5900688 13.2119698 10.3820934 9.5756914 0.2336427 TCGA-AR-A24L 26 1 2866 2221 breast stage iib t2 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 3.81477e-07 10.75847816 10.27613651 11.19713774 10.02737318 9.24542673 9.20130402 9.51527367 10.19874165 8.67313449 14.11373129 11.58487811 10.56636120 -0.93704939 12.86175725 4.31095808 8.21150872 5.99967085 8.98412932 9.11424129 12.96837234 0.38493395 13.50448521 5.62527341 8.77985164 11.00150925 7.03744702 NA 8.04317168 9.64140495 2.81790972 8.40843759 8.45642259 0.38493395 5.45535024 10.29904656 10.93146907 10.61738132 11.71800395 10.38946184 11.71397189 1.23296768 11.14201705 14.07482741 8.71139888 9.15314488 11.61281700 11.98691687 5.08539916 3.45534695 9.83823106 11.56412309 0.06308871 11.14933444 7.88958062 5.93339796 4.88321023 10.07879581 11.75379425 10.14418292 12.54426416 12.85815881 8.51835967 11.41424766 10.82694184 12.00380474 10.53952545 5.28761266 11.98291987 12.66370025 1.06301966 9.99155076 9.36624221 2.52311026 4.52246384 10.09542247 10.21055531 11.06637454 10.50442038 2.38496157 6.35305153 12.24286369 11.07931830 9.79943430 8.72925637 0.0154470 0.2428000 0.2428000 0.0186630 0.0034687 -0.0175290 0.0193630 -0.4875900 -0.0237030 0.0592230 0.0592230 0.0592230 -0.0328600 -0.4754300 0.0277780 0.5164700 0.0227250 0.0093098 0.0093098 -0.4942300 0.0185230 -0.0142280 -0.0575200 0.3802300 0.8178600 -0.0208870 -0.0208870 0.7124600 0.5385400 -0.4996500 0.0154470 0.0000000 -0.4927700 -0.0484780 0.5393900 0.0843540 -0.4162700 -0.4875900 -0.0237030 -0.0237030 -0.0074720 0.0158660 -0.4905700 -0.0193140 -0.0107840 -0.0107840 0.0059700 -0.4754300 -0.0351760 -0.4898400 -0.4868000 -0.4797600 -0.4797600 0.0093098 0.0093098 0.0093098 -0.4807100 -0.4739500 -0.0084385 -0.4377800 -0.4633400 0.3802300 -0.0824100 -0.0208870 -0.4496400 0.0176840 0.0062481 -0.0440090 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.472 -0.438 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 0.000 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.472 -0.438 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 0.000 9.11356117 13.54382254 10.30620629 9.81206368 2.06301966 10.77405400 1.23296768 0.06308871 7.83781965 8.61185439 -0.35199482 8.95166909 3.10742006 10.84152016 9.10742634 1.87038445 7.73014403 10.11831482 8.97292552 9.30143698 9.36612241 9.03816371 11.09920597 1.87038445 7.71228831 9.15776983 1.64800518 0.38493395 10.50156434 4.10742843 11.76238789 11.39744532 8.85419518 10.58438737 8.93185499 9.07146102 6.21785110 2.06301966 -0.35199482 2.38496157 8.04174292 7.05738528 9.98784481 5.09645584 9.43790330 5.91478216 9.82333651 7.27004672 10.32130388 -1.93677320 9.38946184 2.15049469 6.13984805 9.96876153 6.18756784 3.52247011 9.07005948 7.84930188 5.96992407 -0.93704939 13.09451817 0.87042391 10.12440349 -1.93677320 8.15446777 6.10195047 9.80070224 8.15974774 15.0716961 6.7738381 8.9893284 12.8617573 9.5234883 10.5126969 12.9683723 13.0989913 8.2975505 11.1952107 12.7516651 10.1884458 9.8382311 8.2651560 0.6480052 7.9654074 12.4689051 11.07931830 7.07984101 9.10057930 8.87761482 9.57033143 10.34649988 6.05738528 7.30382366 11.58487811 6.72480987 4.66294603 7.58463260 7.33829515 12.58082474 10.06162271 9.01868230 7.35535374 13.16943170 5.29185032 12.50997670 10.61738132 10.01431707 8.60703065 11.87530995 9.28522349 10.50390155 9.41065380 0.06308871 8.29697538 5.24294161 11.14933444 8.85744828 10.33303557 10.07879581 7.43393757 13.26369957 10.09507812 9.76477193 12.69307188 9.64893383 9.71811585 2.38496157 TCGA-AR-A24M 38 0 NA 3660 breast stage iiia t2 n2 m0 female 2005 NA yes mixed histology (please specify) 4 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.733986e-07 11.0427783 10.3503400 12.2117777 10.3587261 8.4177091 9.8300685 10.0200472 10.4128848 8.8673782 14.4686880 10.4275751 11.3712147 -0.3938421 12.7919746 4.5446647 9.3174470 6.0040968 8.6757404 9.2995538 13.3460583 2.5446585 13.7891335 5.9811060 9.1918868 10.6674379 6.3475346 NA 8.4968378 9.3725956 1.1910572 8.0309330 8.1910291 -0.3938421 5.1191362 10.5256750 10.3033239 11.3267386 12.7167132 10.6242669 12.0184602 3.2690331 11.3566342 14.5356180 8.5922406 9.1695808 12.2685126 11.9764817 4.9868887 4.8539956 10.0828130 13.5032820 -1.9788046 11.6718195 4.6935316 6.4177091 4.0434757 10.9300597 11.7746344 10.3373857 12.5767718 13.2012465 8.1059127 11.4158349 11.2695700 12.1341138 11.7408139 5.6649606 12.5198288 7.4723155 -1.9788046 9.7793275 9.2808475 2.9284840 5.2402723 10.5340916 10.5392656 9.6107554 10.0175778 3.9983851 10.1834956 12.7757830 11.7468965 9.8053302 9.6233392 -0.00526100 0.95222000 1.01150000 -0.00415460 0.49023000 0.00277450 -0.00097017 -0.01272500 -0.00581400 0.00069327 0.00069327 0.00069327 0.00069327 0.00069327 0.00291330 0.00000000 0.00000000 -0.01257600 1.00670000 0.01516800 0.49632000 -0.00041585 -0.01161100 -0.01161100 -0.01161100 -0.01684100 -0.01684100 -0.01684100 0.00652620 -0.00526100 -0.00526100 -0.00110870 -0.00415460 0.00277450 0.00277450 -0.00097017 -0.00097017 -0.01272500 -0.00581400 -0.00581400 -0.00041585 -0.00041585 0.00069327 -0.00124730 -0.00124730 -0.00124730 -0.00124730 0.00069327 0.00069327 0.00291330 0.00000000 0.00000000 0.00000000 -0.59585000 1.00670000 0.53626000 0.00388540 0.49199000 -0.00433580 0.00561340 -0.01161100 -0.01161100 -0.59915000 -0.01684100 -0.01684100 0.00652620 -1.23900000 -0.00055444 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6060668 12.8502323 5.2010143 9.5843006 0.1585956 10.2241463 -0.3938421 1.7215477 7.9983840 7.6739493 0.3430098 8.6010613 1.6060631 9.9617849 9.1367981 0.6060631 8.2690317 9.5966436 10.8085987 8.6917606 9.8495701 8.4283719 10.8658100 3.8024621 8.4774588 9.5747335 2.3430382 NA 9.7839015 3.1503810 12.8347853 12.0954966 8.0393046 10.7154621 8.5573515 8.6182258 4.5129601 -0.9788046 -1.9788046 1.0211243 7.9068004 8.6302831 11.6242669 3.9037517 7.2853588 5.2109304 10.2612993 7.9174365 9.5284033 -0.3938421 11.5001266 6.6284339 4.1708544 9.8979320 4.8714790 3.9279912 9.2170916 7.9444315 6.7111025 NA 14.0532146 1.4805236 10.2019459 NA 9.0274303 5.2972281 7.9955190 7.7659378 13.0205318 4.3065029 8.3271659 12.7919746 10.7124138 10.9031741 13.3460583 13.0508660 9.5043759 11.4998574 13.5836448 9.1112165 10.0828130 8.9414570 -0.9788046 7.7267366 11.5841813 11.0168714 7.8587320 9.3748024 9.7132837 8.9392222 10.4487628 6.5407403 8.6182258 10.4275751 6.8508269 5.2878896 7.3654003 7.4477048 11.8502324 10.1539253 7.7145910 7.9083248 13.3751814 5.8155191 10.4177946 11.3267386 10.8742189 9.4347323 11.6335120 9.2201631 10.8912763 9.9825540 0.3430098 8.9539982 5.5985320 11.6718195 10.7816163 9.9420451 10.9300597 7.1529612 13.8723897 10.1944690 10.6193894 13.1463159 9.7967145 9.6966204 -0.3938421 TCGA-AR-A24N 54 0 NA 3035 breast stage i t1 n0 m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 1 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 11.2776286 10.4006346 11.9424810 10.1727136 8.7100777 9.0680476 9.7799388 8.8131713 9.4201790 13.2639156 10.7315922 10.8378333 6.3770161 12.6814405 4.8566272 9.1749067 7.7818587 8.1887194 10.8185583 12.8116451 5.5581880 14.2196107 3.8122312 9.2075664 11.3835109 5.3462123 NA 8.9363276 10.6422192 1.5491763 7.0758930 6.8996953 NA 5.2045516 10.0991750 10.5817947 10.2655029 10.3266176 10.2726881 11.9790230 NA 11.3666612 14.5182425 8.7716545 9.5914043 12.1287966 11.4903922 5.1461338 2.3147255 9.3173821 11.2466867 -1.7725053 11.3578403 5.2496387 6.4560882 4.8122312 9.4373322 11.5700389 10.5458125 13.0459518 13.1490642 7.4940563 11.3809801 10.8754341 11.6661915 11.3774930 5.1099121 13.9891326 10.0680476 NA 10.2423363 9.1122033 2.8751510 5.1580057 10.1539364 9.7161141 9.7281117 9.9146454 0.8122107 11.1801929 12.3483176 11.1024431 9.4952269 8.8863736 0.00680440 1.17090000 1.21010000 0.00000000 0.00000000 0.00917050 0.00346870 0.00013863 0.00013863 0.00097064 0.00097064 2.15010000 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00124730 0.00722170 -0.00367330 -0.74243000 -0.00027724 0.00138680 -0.05212600 -0.05212600 -0.05212600 -0.01078400 -0.01078400 -0.01078400 -0.00387790 -0.01147300 0.00680440 -0.00069303 0.00000000 0.00917050 0.00917050 0.00346870 0.00346870 0.00013863 0.00013863 0.00013863 -0.00221680 -0.00221680 0.00097064 -0.10936000 -0.10936000 -0.10355000 -0.11066000 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00124730 -0.00124730 0.00722170 -0.00367330 -0.00367330 -0.68305000 -0.00027724 0.00138680 -0.34263000 -0.05212600 -0.05212600 0.01251600 -0.01078400 -0.01078400 -0.00387790 0.00610900 0.00041593 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 8.8774240 12.8067035 5.2384965 9.7340731 3.8419832 10.2627562 0.5492256 NA 7.8908279 7.4728224 NA 7.5715653 3.4367215 10.6856763 9.0094491 3.8711241 8.1461328 9.4668683 8.3909196 9.3140695 9.1789188 7.3946882 9.8037542 1.9277069 10.0261465 9.1683174 5.7664282 -1.7725053 9.7009754 3.1814683 12.5309792 11.9201032 8.0852510 10.5665631 10.7258697 8.7060394 2.9821631 -0.1877072 0.5492256 9.8974834 7.4536822 8.1887194 9.6984369 2.3972006 7.5555853 6.2216239 10.2798378 6.0151719 9.5458126 NA 9.9023447 2.8122312 4.0086303 10.0039084 6.3802636 7.0249313 8.2045496 6.9483684 7.9585887 1.3972006 13.4030922 -0.7727518 10.2276220 NA 6.1220867 4.5671195 7.8711259 9.2503311 13.897803 5.304084 9.090682 12.681441 9.558187 11.520023 12.811645 12.777896 9.273589 11.297183 13.315685 9.530480 9.317382 8.546942 2.227279 7.140159 11.192333 10.8543476 7.4071785 9.1037866 9.1770966 10.0208730 9.5431382 5.7895128 9.8652531 10.7315922 6.4656741 4.0601598 1.5491763 8.2596736 11.9189042 9.9888210 8.3228777 8.3120784 14.4119902 7.0378412 12.8601872 10.2655029 10.6104340 9.5553836 11.0581810 9.5010653 10.7999700 9.5356088 0.8122107 8.4283154 7.7251215 11.3578403 8.2920124 10.0902944 9.4373322 7.8801688 13.2476421 10.4899519 10.4766796 13.6319457 9.9080688 9.3655416 3.2272636 TCGA-AR-A24O 43 0 NA 3607 breast stage iiia t3 n2 m0 female 2005 NA yes mixed histology (please specify) 7 white not hispanic or latino NA NA 2 4 NA NA 3 3 2 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 10.929585 10.290257 11.910121 10.118081 8.349635 9.387418 10.245777 10.362712 9.962843 10.743025 11.557749 10.653435 1.611172 11.997389 4.441244 9.434889 6.606149 8.603634 10.055032 12.884186 2.964805 12.977975 6.336060 8.663421 10.428862 6.485636 -1.558942 9.201131 9.636615 3.485633 7.749582 8.011098 3.248596 5.781092 10.055032 10.702456 10.086451 12.087014 10.103466 12.016664 2.528696 10.857248 14.462157 9.153899 9.590355 11.394348 11.730109 5.560183 3.833558 9.632302 12.535403 -1.558942 11.933096 5.528706 7.155488 4.507332 11.150111 12.069346 10.272154 13.130039 13.130149 7.640915 11.265605 11.135189 11.679946 11.570526 5.248599 12.263315 9.482902 -1.558942 10.186497 9.155488 3.398227 6.209426 10.453518 10.454565 10.165330 9.664037 3.611172 9.745023 13.340458 12.316800 10.036034 9.609288 2.3581e-03 2.3581e-03 2.3581e-03 0.0000e+00 0.0000e+00 -1.9325e-01 -3.3243e-03 2.7728e-04 2.7728e-04 -6.9796e-03 -6.9796e-03 -6.9796e-03 6.2481e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.8394e-03 -2.7724e-04 2.2193e-03 5.8283e-03 2.7745e-03 5.2749e-03 5.2749e-03 7.2217e-03 7.2217e-03 7.2217e-03 3.0522e-03 2.3581e-03 2.3581e-03 -3.4627e-03 0.0000e+00 -1.9325e-01 -1.9325e-01 -6.7729e-03 -2.7707e-03 2.7728e-04 2.7728e-04 2.7728e-04 6.1202e-05 1.8030e-03 1.9418e-03 -5.1227e-03 -5.1227e-03 2.2595e-03 1.1261e-02 5.1359e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.8394e-03 -1.3818e-04 -2.7724e-04 2.2193e-03 7.3609e-03 -3.2681e-01 -3.6124e-01 5.2749e-03 9.0312e-03 7.2217e-03 7.2217e-03 3.0522e-03 5.5529e-03 -3.6329e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.65008652 13.28462389 5.78997177 10.12905565 2.57545756 10.62890398 2.02619807 1.90068329 8.15204902 8.85698445 0.02616265 8.94398489 4.63106935 10.09811435 9.13647083 1.02623349 10.66464096 9.80044308 12.02679197 10.16234173 9.44528742 8.26142174 11.75270708 4.44124443 8.52072749 9.70978465 5.54976773 NA 9.89451313 4.44124443 13.02332573 12.29338189 9.21931980 10.49006997 9.78387289 9.01772681 4.63106935 1.61117238 1.24859555 3.96480523 7.89656976 7.72433103 10.21231934 6.64091442 8.06925050 5.07059971 9.62859463 7.24537396 9.83355995 0.76315658 11.67755581 3.34813325 5.58079371 9.82197961 6.15967358 5.48563613 9.87430640 8.66644984 8.20611425 0.02616265 13.65882168 1.76315658 9.91240975 NA 8.18943518 7.18607659 7.97846108 8.81192983 13.311600 5.781092 8.106579 11.997389 10.325031 10.029489 12.884186 12.475612 9.267370 11.140381 13.595982 10.814108 9.632302 7.925058 1.026233 7.209427 11.143848 11.278279 6.360106 9.565364 8.835705 9.073429 10.280529 6.884186 7.991989 11.557749 5.980402 5.395440 5.127745 7.297668 11.789971 10.483586 8.500587 7.575669 12.590752 6.820621 12.884801 10.086451 10.543546 9.426373 11.447218 10.258226 10.719111 9.552378 NA 9.342291 6.698631 11.933096 8.445463 10.812633 11.150111 7.309201 13.997808 10.316992 10.667354 13.106190 10.088251 9.567947 3.528709 TCGA-AR-A24P 47 0 NA 84 breast stage i t1 n0 m0 female 2005 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 4 4 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.161568e-07 3.467973e-08 11.2528604 10.3566202 12.0908455 10.4069828 8.7537198 9.6416633 9.7676730 9.3463974 9.5621794 12.7412163 11.4198368 10.5281007 5.4103615 13.3621804 4.5326162 9.8764681 6.5007065 8.6473998 11.0134064 12.4900085 0.7956838 14.1146405 7.1965303 8.6772743 10.6274856 7.0018506 -1.7893618 11.0532977 9.7885890 3.5682389 7.7244156 8.0733254 -0.2043993 5.2875018 10.4002038 10.7972933 9.6432299 11.2705395 9.8450454 11.8190584 1.3806186 11.5333204 14.3858477 8.0542011 9.3139693 11.1115549 12.5257668 5.6030061 3.7956527 9.7681517 11.8060621 -0.2043993 11.2492642 4.4586182 6.3604345 5.1993740 10.6838864 11.9248262 10.7928301 13.4528574 13.1765625 8.1310410 11.3497597 11.1146885 11.9388212 11.5259792 5.5235714 12.6447950 10.8729114 -1.7893618 10.2834907 9.3623388 2.5333391 5.2106889 10.3585290 10.3702441 10.7005360 10.3331926 2.7956423 8.9513121 13.9196911 12.1139109 10.1597852 9.4201415 -0.0318360 0.9703900 0.9703900 0.0184530 0.0184530 -0.0148470 0.0887650 -0.5278200 -0.5278200 0.0540200 0.0540200 0.0540200 -0.0581980 -0.0581980 0.0000000 0.0000000 0.0000000 0.0277080 0.0277080 -0.0519240 0.0248990 -0.0051916 -0.5438600 0.5502700 0.5502700 -0.0096977 -0.0058828 -0.0058828 0.0535930 -0.0318360 -0.0318360 -0.0002077 0.0184530 -0.0148470 -0.0148470 0.0887650 0.0887650 -0.5278200 -0.5278200 -0.5388700 0.0698840 -0.0377640 0.0540200 0.0149590 0.0149590 0.0149590 0.0149590 -0.0581980 -0.0569130 0.0000000 0.0000000 0.0013176 0.0013176 0.0277080 0.0277080 0.0277080 -0.0519240 0.0248990 -0.0051916 -0.5492000 -0.5438600 0.5502700 0.0497530 -0.0096977 -0.0058828 0.0500920 0.0372880 -0.5708600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.006 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.006 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8454991 13.4301591 9.0364418 9.5455200 3.8831125 10.0818232 0.5325663 0.2106382 8.4680758 8.4358957 0.7956838 8.6400320 4.2106850 10.6719117 9.3047659 1.5326162 9.0132046 9.2713841 9.9689113 9.7055436 9.6679765 7.7362091 10.8857630 3.2106850 9.7005360 9.2720594 3.2106850 -1.7893618 10.3027844 2.9655811 12.9122111 12.1379105 8.0979089 9.9098266 8.6762544 9.0372367 4.0686708 1.9111163 1.0180644 9.0204561 7.8363969 8.1384659 9.7219466 3.2981451 7.2901728 6.0498921 9.9538395 8.1546678 9.9266500 -0.7893618 10.3787333 3.4201455 4.2550852 9.7211110 7.0027948 6.0372372 9.3572568 7.6369530 6.8688991 -1.7893618 13.6868647 0.2106382 9.9253629 -0.2043993 8.9904075 5.5505375 7.7729308 8.6411406 14.479086 6.074874 8.550538 13.362180 10.374338 10.937545 12.490008 13.007336 9.371820 10.949836 13.500923 11.150084 9.768152 8.718483 1.795642 7.834570 12.011992 11.228888 8.483318 9.337393 9.104748 10.014819 10.515490 6.420142 6.129551 11.419837 7.001851 5.339971 8.270033 7.394696 12.425007 10.564662 9.399277 8.026071 13.705762 6.653632 12.376638 9.643230 10.625109 9.856797 11.153752 9.992867 10.972032 9.753720 NA 9.205240 6.911128 11.249264 9.741582 9.896304 10.683886 7.930163 14.092137 9.850933 10.282486 13.731614 10.217365 10.350239 1.532616 TCGA-AR-A24Q 49 0 NA 3172 breast stage iib t3 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.225215e-06 1.31783e-06 10.2921576 9.6933957 11.3111253 9.9928292 9.7895455 8.6216362 8.3489729 10.7400630 11.1522737 12.7610891 11.4656882 10.8787938 -0.1952856 12.0875478 3.4676186 10.2242615 6.4958151 8.3770370 11.7311955 7.6077068 -1.7804133 8.6553601 7.5211858 10.3801917 11.2761583 6.3745074 -1.7804133 11.5595023 10.1351959 2.3896219 7.7095381 9.6237670 -0.7804133 5.9131766 8.8084047 11.0840695 9.7728391 10.5320057 10.4479074 11.6721885 1.6791085 7.0807770 15.8696197 7.4877404 9.5114362 10.9594705 10.8870232 3.4676186 NA 9.7155449 10.9484608 1.0270125 10.3272340 6.7155447 6.7471672 5.4388584 9.9531290 11.9297429 10.0954392 12.0275479 13.4109034 7.7607865 11.9580989 11.7675267 11.5725610 10.9922106 4.5947277 12.5790277 9.9442037 -0.7804133 9.7264934 9.9205631 3.5825078 5.5050906 12.4923197 9.3776684 10.7245089 10.2753113 9.1496879 8.7914426 12.5595399 12.2739550 9.4430884 10.0230138 -0.03517600 0.08276500 0.87977000 0.92046000 0.51438000 -0.43116000 -0.43007000 0.22499000 0.33141000 -0.07854400 -0.07854400 2.42600000 -0.43734000 -0.06866300 -0.00043078 0.00000000 0.00000000 1.38560000 -0.04996500 -0.83144000 -0.41915000 2.10820000 -0.44041000 -0.43680000 0.68382000 0.30777000 -0.03857800 0.35512000 0.31222000 -0.85591000 -0.03517600 0.31386000 -0.37808000 -0.43116000 0.30745000 0.41463000 -0.45469000 0.22499000 0.33141000 -0.44932000 -0.44059000 0.28802000 -1.14130000 -0.03435900 -1.16840000 0.58704000 0.43648000 -0.60322000 -0.36942000 -0.80815000 0.00000000 -0.34373000 -0.33445000 1.08710000 0.30314000 -0.45136000 -0.81299000 -0.44329000 0.34275000 -0.03885000 0.46981000 -0.43680000 0.78736000 -0.09102300 0.35512000 0.31964000 -0.03026700 0.39429000 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.312 0.312 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.689 0.689 0.000 0.000 -0.457 0.454 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.312 0.312 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.689 0.689 0.000 0.000 -0.457 0.454 9.1541179 13.3013814 5.9745775 9.6933957 4.2420613 12.9962257 1.3896219 4.0525811 8.6385966 8.9088144 7.3770370 10.2876452 7.5416178 10.3939914 9.7120439 2.9201218 8.7205319 10.2200421 7.4817849 9.1775175 9.0002541 7.4070417 11.3867944 1.3896219 7.9322171 10.0881266 2.3071662 -1.7804133 9.8435714 5.9745775 12.5337066 11.4621197 7.5097085 10.2048203 7.7393263 9.8412840 3.9476101 2.9201218 -0.7804133 6.1622040 7.3971099 8.4497103 7.4747183 4.1265765 8.4095390 5.7895467 9.6184336 8.8991699 11.4153697 0.5416140 12.6466753 2.4676186 4.1504297 10.6263387 6.0016401 8.0525800 8.9552460 9.4370419 9.4693960 NA 13.4023558 0.2197106 10.6540575 0.8046318 8.3592413 6.3071534 8.1926696 7.3541162 13.001408 6.369437 8.215457 12.087548 9.061254 11.165134 7.607707 13.170382 9.043853 12.792035 12.783780 10.881468 9.715545 7.758849 1.920141 9.426704 10.786695 10.717542 6.555080 8.908814 8.644906 7.441277 10.766782 6.841742 5.940789 11.465688 5.620569 2.467619 8.787646 8.528609 13.467210 10.713545 7.126581 7.725501 10.637279 7.904438 10.396430 9.772839 9.962841 9.693903 11.282411 11.947185 10.793810 9.311125 NA 8.973684 8.914918 10.327234 8.336034 10.584919 9.953129 7.317985 13.832155 9.822853 11.057909 12.772959 11.191772 9.336034 2.389622 TCGA-AR-A24R 45 0 NA 3430 breast stage iiia t1 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 2 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 10.508594 10.326469 12.148362 10.082778 9.428725 9.424140 9.896302 10.621048 9.308854 14.751512 11.149230 11.144708 5.151311 12.212674 3.555215 9.147841 6.850044 8.523407 10.885710 12.803965 1.713916 13.916006 2.376874 9.636066 11.286923 8.037338 1.298893 11.118872 10.255327 2.829383 7.660326 6.974435 NA 3.083145 10.101925 10.571370 9.889249 11.226483 9.376279 11.605818 1.829403 11.959064 14.195139 8.598312 9.696901 11.573183 11.643412 3.486496 2.521252 9.246588 11.443811 NA 10.774828 4.538333 6.640698 5.226979 10.871675 11.851005 10.106940 11.739854 12.820361 8.658375 10.931461 10.415341 11.421410 11.309009 5.910306 11.732571 7.858565 NA 10.339312 9.565656 3.040156 5.117629 10.901466 10.306987 10.189979 10.863019 1.128953 8.212424 12.016642 10.319387 11.046876 9.195034 -0.31509000 0.73544000 0.71805000 -0.00391550 -0.00391550 0.01499000 0.10975000 -0.69235000 -0.69235000 0.15676000 0.15676000 0.69404000 -0.10828000 -0.10828000 0.20072000 3.10980000 0.18900000 0.03294700 0.03944000 0.00563670 0.25695000 -0.39266000 -0.26322000 -0.24439000 1.38110000 -0.35991000 -0.35991000 -0.36826000 2.71830000 -0.33171000 -0.31509000 -0.14352000 -0.00391550 0.00010095 0.01499000 0.14172000 0.14172000 -0.69235000 -0.69235000 -0.71687000 0.00000000 0.00218160 0.15991000 -0.69108000 -0.69341000 -0.00764760 -0.00764760 -0.10828000 -0.13926000 0.20072000 -0.69525000 -0.70250000 -0.70901000 0.03294700 0.03944000 0.00689290 0.01806500 0.24925000 -0.42816000 0.03055300 -0.26529000 -0.24439000 -0.33367000 -0.35991000 -0.36826000 -0.02360300 0.66932000 -0.36479000 -0.108 -0.108 -0.480 -0.680 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 -0.144 0.104 -0.108 -0.108 -0.480 -0.680 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 -0.144 0.104 8.7482479 12.3193869 4.0831453 10.0335795 2.9869206 9.5115690 2.6525094 -0.8711787 8.6177892 7.0023886 NA 7.4120329 2.8293828 10.4415443 9.0758511 3.8013656 12.0273574 9.3298434 6.7288579 9.5330221 9.5503155 7.7288579 9.5724065 2.3768738 7.5677371 9.1936877 2.6525094 0.1289532 10.0418342 3.3383959 11.7224527 12.1742780 7.2582278 9.5703329 10.6630046 9.0932858 5.3673501 1.7139157 1.1289532 8.8987828 8.7546537 7.9539037 8.8996089 4.5039847 7.8822622 6.7101452 10.3883940 6.4952666 9.7115574 -0.8711787 10.0652148 3.1289367 3.0358350 9.8122335 7.8894985 4.4327256 8.4754586 8.1485356 6.8189426 -1.8709149 13.3234710 -0.2861283 11.4904775 NA 7.7835811 2.7139157 8.4919845 8.3347381 14.592627 5.459861 8.518039 12.212674 10.502354 10.739278 12.803965 12.837274 9.461541 11.076582 12.747158 9.998153 9.246588 8.568776 2.298864 7.941122 13.472478 10.804240 8.199066 8.894645 9.335959 9.149925 11.023766 6.652507 8.841472 11.149230 5.094730 2.035835 4.571889 9.879899 10.145753 10.283447 10.698563 9.204424 12.500245 6.516962 11.475107 9.889249 11.111582 9.172656 11.488420 9.306987 10.915827 8.868726 NA 8.722457 6.023763 10.774828 6.242686 10.663005 10.871675 7.856866 13.286803 10.262408 9.625299 12.102284 9.397487 10.013879 2.035835 TCGA-AR-A24S 61 0 NA 2976 breast stage i t1 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 1 4 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 3.81477e-07 11.1461869 10.1171624 11.6687426 10.4942968 8.0207239 9.5520525 9.3761297 10.3325209 9.7989420 12.3726253 10.6830889 10.6579212 0.5514914 11.7065603 3.5514914 9.4237023 5.4193872 8.7462459 10.8357349 12.4945167 2.8145299 13.6174101 8.0813098 8.8734174 11.2082715 4.0369165 1.5514914 9.4322970 10.7380986 2.1364539 7.9386445 7.5514891 NA 5.2629856 10.0604724 10.9286996 9.5327710 10.5983403 10.4637797 12.1368273 6.1661992 11.1573390 14.8990274 7.8882367 9.8557263 11.6089394 11.3924243 4.6725045 1.0368901 10.1308050 10.6859155 0.5514914 11.6943620 6.5287698 7.9489500 6.7133769 10.7662939 12.1028129 9.7946631 11.9491637 13.2160253 7.7841499 11.1129680 10.5884594 11.8746565 11.3954102 5.3994856 12.6853377 11.1976878 2.3994993 10.3578776 10.2277988 3.1846929 7.2068405 11.0541221 10.5528973 10.5551476 11.2775369 7.1364519 6.3170236 13.0593828 12.1658309 9.8971161 9.3183492 -0.267540 0.083130 0.083130 -0.532200 0.037998 0.025792 -0.574020 0.031370 0.031370 -0.884220 -0.884220 0.965660 0.223690 0.223690 0.943130 0.042949 0.042949 0.028134 -0.600940 -0.272880 0.036022 0.225690 -0.547790 -0.239910 0.339590 1.582700 -0.220150 -0.259320 0.153900 -0.549500 -0.267540 0.018597 -0.532200 0.073478 -0.565100 -0.574020 -0.574020 0.031370 0.031370 0.031370 0.044932 0.049331 -0.884220 -0.255210 -0.255210 -0.255210 -0.234410 0.223690 0.223690 -0.579740 0.042949 0.042949 0.042949 0.028134 -0.567940 -0.566290 -0.255090 0.036022 -0.561710 -0.547990 -0.547790 -0.239910 -0.313940 -0.548790 -0.259320 1.211100 -0.180990 -0.227170 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 0.000 -0.250 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 0.000 -0.250 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 0.000 9.0875421 13.3611769 8.7063071 9.8716127 2.8734195 10.6389520 2.3170146 0.5514914 8.1167816 7.1808460 NA 9.2678834 1.0368901 10.6135352 9.9806866 0.5514914 10.1706086 10.6560878 7.5010243 7.3818457 9.3981077 8.0687648 10.7951391 3.7214164 7.6992025 9.7658082 3.7214164 NA 10.1859371 1.6889860 13.3277576 11.8700319 7.5827080 10.2973315 11.0732858 9.0914232 4.1837564 2.2295572 0.2295879 0.5514914 9.2636723 7.8516129 9.9739744 6.1364519 8.4935461 6.0750512 9.6405423 7.8877726 9.4125760 -1.7705351 11.6537273 3.1837564 3.8442752 10.0161247 5.7901230 4.6889916 9.4851798 10.1194451 5.6218790 0.8145094 13.7617038 -0.1854086 9.8652792 -1.7705351 6.5241812 5.5056845 8.3932107 8.2889053 12.430303 5.737357 8.909041 11.706560 10.354377 10.086765 12.494517 12.474074 9.434132 11.438710 13.248109 12.068076 10.130805 8.712369 2.688986 8.288905 10.735869 11.0578959 6.4341328 9.0789660 8.2039754 8.9247893 10.8702172 7.1632522 5.4774895 10.6830889 4.4390114 -0.7705351 6.1243778 7.8639001 11.3450924 10.3950961 9.0141960 7.5056853 11.9735539 6.2295610 12.0445269 9.5327710 10.7418076 9.8698059 11.4913621 9.8359662 10.6584446 9.8761197 1.5514914 9.3106450 5.7452615 11.6943620 8.7531231 10.4813393 10.7662939 7.7415115 14.1798207 10.0580942 10.6205360 12.7833103 10.3073781 9.7580151 1.5514914 TCGA-AR-A24T 46 0 NA 3202 breast stage iiic t3 n3 m0 female 2006 NA yes infiltrating lobular carcinoma 15 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 10.4061551 10.3868500 11.5065124 9.7562292 8.7109280 9.5852965 9.3116981 10.0228413 9.8120894 9.9405893 10.1599388 10.7345749 3.1204183 12.7772325 3.9201122 9.4463404 6.5798424 8.6027330 9.3320283 13.1578048 2.3655246 13.8262667 6.3767505 8.9486055 10.9605472 7.8146715 -0.6344194 8.3064090 8.2633683 5.1204100 9.3989459 7.9783913 NA 5.8331279 10.3506533 11.0657458 9.8463131 11.2665783 9.7340294 11.5842375 1.5354558 10.4085502 14.8409714 7.7380619 10.0542103 11.3193556 11.6668762 5.1857001 4.3878933 9.4948060 11.8304515 -1.6344194 12.0980084 4.9802310 6.3255249 5.7492259 10.6967198 11.7589134 10.3106009 13.1188441 12.9873458 8.7042592 11.4073531 11.3643989 11.9870025 11.1105669 4.8573739 12.2089533 12.7946681 NA 10.2899643 9.1526091 3.4363351 5.8493388 10.6199611 9.8920221 10.0093791 10.1485211 3.8249511 7.3226249 13.5911822 13.2805619 9.9306250 9.5133638 -0.41769000 0.37533000 0.37533000 0.01157900 -0.00018183 0.00434170 0.00350830 0.00212010 -0.41715000 0.00087148 0.00087148 0.00087148 -0.01526900 0.00059412 -0.41110000 0.00212010 0.00212010 -0.00370010 -0.00425750 -0.41923000 -0.00065352 0.00309180 -0.41418000 -0.00425350 -0.00425350 -0.01776400 -0.01776400 -0.01776400 0.00434170 -0.41033000 -0.41769000 -0.00646560 -0.41857000 0.00434170 0.00000000 0.00350830 0.00074937 0.00212010 -0.41715000 -0.42851000 0.00156510 0.00156510 0.00087148 -0.00269880 -0.00269880 0.00614860 0.00614860 0.00059412 0.00059412 -0.41110000 0.00212010 -0.41429000 -0.41429000 -0.00370010 -0.00231580 -0.00231580 -0.41330000 -0.00065352 0.00073280 -0.41297000 -0.41418000 -0.00425350 0.00726140 -0.01776400 -0.01776400 0.00434170 -0.00217740 0.00253650 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.418 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.418 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.28587564 14.02896982 9.14606278 10.27878628 1.68746387 10.91891220 0.36546859 -0.04945693 8.43966427 9.58952457 -0.63441943 9.08919224 3.45299071 10.19683016 9.18250659 -0.63441943 8.98299044 9.75784033 8.92967237 9.24357388 9.91001890 8.07976849 11.18090619 4.09344186 8.69643972 10.05595739 3.31971908 NA 10.16156249 3.75784467 12.37910729 11.85436725 9.35775322 10.68038933 9.19841287 9.11539225 5.90468158 -0.04945693 0.68741908 0.68741908 8.15342536 7.61818799 10.60273282 4.98023099 6.51308327 6.04500386 9.75944965 6.23588786 9.73348366 NA 11.52649728 2.75783400 5.74922585 9.92732627 4.71655199 3.65092536 9.35916885 8.34280272 6.80015054 NA 13.69209282 0.36546859 9.96078043 NA 7.80431498 6.34280361 8.26940490 8.56027971 12.362791 4.705375 8.526655 12.777232 9.908071 10.613747 13.157805 12.362349 9.633480 11.192667 13.493356 10.993513 9.494806 8.480566 1.172872 7.565195 11.394983 11.515746 7.696440 8.916270 8.505074 8.435644 10.332872 7.005768 6.972853 10.159939 7.198413 5.365525 7.682936 6.298387 11.461414 9.623500 8.596744 7.055521 12.231546 5.841256 12.090213 9.846313 10.798065 9.655542 10.631138 10.114554 10.769068 8.916270 1.687464 8.865966 6.192072 12.098008 8.039715 10.421832 10.696720 6.762128 13.787719 9.557816 10.258445 12.878510 10.132880 9.798065 3.365525 TCGA-AR-A24U 47 0 NA 2363 breast stage iia t1 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 4 NA NA 2 6 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 10.5118938 10.0275131 11.5659780 10.3028491 7.4924661 9.5200474 9.5004007 10.1561292 10.5271845 12.1535110 10.1201077 10.4155318 3.5342858 16.3703821 6.8437955 9.7800431 3.6529339 8.6290054 7.7042115 11.8186316 -1.5950969 10.2123586 8.0897524 8.7246758 11.0950016 7.1598915 -0.5950969 9.9397928 11.3316703 3.3118954 7.7647535 7.7625555 0.9899383 6.7669476 9.9422221 10.3801352 9.5122208 10.2071161 10.2551905 11.8046821 0.7269184 6.7448540 15.1106091 8.6655353 9.2575097 11.1004495 11.6098804 5.1329223 4.8968579 9.6979005 12.2337352 NA 10.6805462 6.4871535 7.8122717 5.7269320 11.1804082 11.5853790 10.4408338 12.4009474 12.8200852 6.0844831 11.2629847 10.3210511 11.1073928 11.5002359 5.2504955 12.4402323 8.7559428 NA 10.3926230 9.1278112 2.4068087 6.8101449 9.2559718 10.6930046 10.2975465 10.8042816 2.4924685 7.1430964 13.3584272 12.7596663 9.9290555 8.3965256 -0.0151910 0.3776500 0.3665300 0.0200630 0.0200630 -0.0785000 0.3148200 0.0567980 0.0567980 -0.2543100 -0.2543100 2.3979000 0.5441800 2.2886000 -0.0782780 -0.0782780 -0.0782780 -0.0822690 -0.0822690 0.1820700 0.0566550 0.0344110 -0.1330300 3.6569000 -0.2265000 -0.0327230 1.0506000 -0.0278080 0.0652260 -0.0151910 -0.0151910 -0.0634350 0.0200630 0.0576530 -0.0011087 -0.2300600 -0.1909900 0.0567980 0.0567980 0.0473970 0.0579390 0.0579390 -0.2543100 0.0000000 0.0000000 0.0000000 0.0000000 -0.2464200 -0.2464200 -0.0782780 -0.0782780 -0.0996500 -0.0996500 -0.0822690 -0.0822690 -0.0822690 0.1820700 0.0741210 0.0382060 -0.1948700 -0.1330300 -0.1916200 -0.0295290 -0.0327230 -0.0278080 0.0425600 -0.2430200 0.8492900 0.544 0.145 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.037 0.629 0.000 0.000 0.000 0.000 0.544 0.145 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.037 0.629 0.000 0.000 0.000 0.000 9.948035432 12.424507524 6.589878814 8.970105603 5.212359222 10.441177290 3.989965504 3.896853073 8.084483678 7.559821399 NA 9.128766904 5.034360999 11.130369910 9.214771774 1.726918386 10.334262110 10.006310228 11.040721780 8.721285154 9.117616611 7.944162693 11.264538425 3.159887479 6.920702990 10.109771901 2.928559827 -0.595096878 10.733678622 2.652922393 12.178658036 12.040268313 7.799466197 10.599760477 9.456212706 8.975808139 7.699624504 2.212351440 0.405012083 4.814396610 7.967245860 8.217180783 7.479144853 5.048859556 8.551241449 7.777868762 10.728902871 5.959591662 8.881749953 2.105443420 9.862897515 4.574931031 6.735920163 9.491916012 6.060140360 9.164891846 9.121823063 9.409224168 9.759253058 0.405012083 13.100286342 0.989938264 10.088875540 -0.009989098 8.295267979 4.554748460 8.236310835 9.693293017 9.8986689 8.1498375 9.3290738 16.3703821 10.4252891 11.4078187 11.8186316 8.9305245 8.7114870 10.9953568 13.6477312 10.7311523 9.6979005 10.0547089 -0.5950969 7.3936882 12.1535110 11.2884106 4.4493963 9.0178721 8.3693443 8.5496619 9.8985440 7.7224162 6.5749280 10.1201077 6.8396321 0.9899383 7.7822139 7.5788308 12.7464530 11.0736671 8.5364621 8.4050036 10.8489832 9.2559718 12.4720254 9.5122208 10.2006375 9.3372185 11.7183119 10.2167797 10.5271845 9.5258896 -1.5950969 9.5099693 9.9993282 10.6805462 7.9805429 10.5642443 11.1804082 8.0252786 13.4212896 10.4633337 10.1485759 12.4876517 10.2239851 9.3965256 4.1329223 TCGA-AR-A24V 52 0 NA 3203 breast stage iib t2 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 10.3728913 10.7843623 11.3929633 9.7240771 9.2591802 8.8781567 8.5782372 10.1723670 10.2217715 13.2272800 11.6608909 10.4287864 1.0921398 12.6288534 4.0396561 10.4832106 4.0661236 8.3400481 9.4326064 12.1519477 0.6067265 13.0019064 0.6067265 9.4609387 10.6240588 3.0921228 -1.7150122 11.7152573 11.6657676 1.8697135 8.1176556 8.9331232 1.0921398 4.0126849 9.9159426 11.3335930 10.1935334 12.7009693 9.8911708 11.6875112 1.4547023 10.5362480 15.0013439 7.9241242 9.3175001 11.2434995 11.9032657 4.5326910 NA 9.5896873 11.3043563 -0.1302075 11.2656191 6.5655362 7.1795837 6.4395832 10.5503806 11.6784241 10.2066065 12.3692418 12.7584713 8.2875803 10.9263658 10.4679729 11.1409965 11.2092070 5.1427483 11.8954444 10.7853585 -0.1302075 10.8217412 9.7073560 1.8709368 7.3535438 10.2501891 9.8374346 10.6673896 10.6695493 6.6813706 6.3985077 13.0623805 11.7987398 9.3735538 9.0628427 0.00000 0.00000 0.00000 0.14935 0.14935 -0.13709 0.80247 -0.14605 -0.14679 0.72244 -0.75349 1.01840 0.14995 0.14995 0.16280 2.51300 0.14816 -0.48806 0.12800 -0.44178 -0.13005 -0.12784 -0.35099 0.53134 0.53134 0.10643 0.10643 0.10643 0.68549 0.00000 0.00000 -0.12828 0.14935 -0.13709 -0.12823 0.80247 0.80247 -0.14605 -0.14679 -0.14679 0.19786 0.14781 -0.80069 -0.13264 -0.13264 -0.13264 -0.13264 0.14995 0.14995 0.16280 -0.43442 -0.44825 -0.42626 0.12402 0.12800 0.12800 -0.44426 -0.13005 -0.12784 -0.43983 -0.35099 0.53134 -0.33318 0.10643 0.10643 0.69540 -0.12823 0.15054 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.801 0.915 -0.133 -0.133 0.000 0.000 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.801 0.915 -0.133 -0.133 0.000 0.000 8.3223126 14.4381394 9.1719861 9.9452072 3.7766199 9.7271908 -0.1302075 NA 8.1365144 9.0446537 NA 8.8295271 1.4547023 10.2847656 9.3508548 4.4140476 8.2677591 9.7731079 6.9642461 10.0860697 8.8114213 7.6489004 11.3083467 3.1916574 9.1450767 10.3199083 0.8697135 -0.1302075 10.6061300 3.0396473 12.4923900 11.9083042 8.2677591 10.6343233 10.5276419 9.2875806 5.0396517 1.0921398 -0.7152490 3.5701714 8.1396337 8.5620531 10.0321193 4.2155000 4.1347631 6.5039338 10.0583169 6.5421528 10.0747067 -1.7150122 10.2977392 6.0262335 3.8697234 9.5134880 5.9795772 2.7442042 10.1029482 9.1481776 4.7441988 1.2847510 13.5506369 -0.7152490 10.3305252 NA 8.4024088 3.5701714 8.4319706 8.6123182 14.6476093 4.7925587 8.3318892 12.6288534 9.6770829 10.1431351 12.1519477 12.0488078 9.1727478 10.3161221 13.1642531 9.8925581 9.5896873 8.8631381 -0.1302075 8.1081329 11.4175866 11.032539 7.588546 8.708932 8.626840 9.423677 9.707398 6.953651 3.744193 11.660891 6.689907 3.039647 5.964246 6.775015 11.550381 10.068582 9.464053 8.906817 12.703606 4.808328 12.368049 10.193533 10.210320 8.842229 11.312499 9.774613 10.311980 9.136515 NA 8.741079 4.414048 11.265619 10.343096 10.284413 10.550381 6.816147 13.299832 10.172367 9.921843 13.406501 10.036310 9.376862 1.284751 TCGA-AR-A24W 55 0 NA 991 breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 3 white NA NA NA 2 6 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 0 10.7449363 10.7134127 11.9039460 9.7563143 8.3813513 8.9428203 10.6927548 10.3443366 10.6019269 13.7895456 10.9708088 10.8565850 3.1986670 12.4149200 4.5991988 10.2686191 7.0978351 9.1676715 9.9857782 12.1816528 2.8027309 12.6985051 7.1170456 9.4556698 10.8577275 8.2465463 -1.4453620 10.5634942 9.5342282 3.4616988 8.0325615 8.3573193 2.2552288 5.0466569 9.8522924 10.7569269 10.4092819 11.6292790 10.1588929 12.1545997 9.0345833 10.9689597 14.5641505 9.2467646 9.1237091 11.8956267 11.5628814 5.6422655 4.1397642 9.7284801 12.5325301 -1.4453620 10.8871194 6.2895117 5.5548037 4.2552439 10.7219075 12.1430492 10.2604354 12.6354540 12.9364811 7.2962702 10.9216716 10.9719567 11.3510454 11.7557016 5.3229881 11.6628373 11.9669759 0.5548344 9.9540810 9.5923500 4.1736312 3.8402014 10.7803117 9.9810677 10.5974884 10.1218084 4.4127815 8.2254591 13.4646492 13.0733947 9.7020080 9.2886656 0.0000000 0.4176900 0.4324300 0.0069435 0.0069435 -0.1358700 0.1563600 -0.0426520 -0.0426520 0.1577100 0.1577100 0.1577100 -0.1533600 -0.1533600 0.0125160 0.0125160 0.0125160 0.1396900 0.1396900 -0.1369100 0.0037465 -0.1563100 -0.0088526 -0.0088526 -0.0088526 0.1152100 0.1152100 0.1152100 0.1486000 0.0000000 -0.3038100 -0.1463400 0.0069435 -0.1358700 -0.1358700 0.1563600 0.1563600 -0.0426520 -0.0426520 -0.0426520 0.5827400 -0.1488800 0.1577100 -0.3029000 -0.3029000 0.0139110 -0.0045754 -0.1533600 -0.1533600 0.0125160 0.0125160 0.0125160 0.0125160 0.1396900 0.1396900 0.1396900 -0.1369100 0.0037465 -0.1563100 0.0768540 -0.0088526 -0.0088526 -0.1370400 0.1152100 0.1152100 0.1486000 -0.1481100 -0.1827000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.303 0.000 0.000 0.000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.303 0.000 0.000 0.000 8.6032899 12.5699567 7.7421551 10.0670496 3.6737486 10.7932078 -1.4453620 3.2552439 7.5716116 9.5957776 NA 9.1099098 4.9641953 9.9705448 9.4034260 2.3621613 10.0340780 10.1759391 12.7669194 9.5827090 9.5541688 8.3312358 11.1029024 2.7247376 9.9073983 10.0406323 6.6475606 -1.4453620 9.4781305 4.4374475 12.7927598 12.1065113 8.8688198 10.5688235 7.2690481 9.3435213 5.8946529 0.5548344 2.2552288 5.8946529 8.2448010 7.6073710 10.4601901 5.2413025 8.2316417 4.8402064 10.1098714 7.0546488 9.8957658 0.1397314 12.6233294 3.1397642 5.4251672 9.5488595 5.2649192 5.4374475 9.3565114 6.6737444 6.7247280 -1.4453620 14.2054902 0.5548344 10.4624448 NA 7.4706825 6.8901937 8.8585838 9.0183273 13.6823686 4.6422684 8.3685842 12.4149200 10.1593562 11.1743353 12.1816528 12.1734179 9.2486907 11.3441329 14.2525851 12.3691852 9.7284801 8.3262924 -0.4451656 7.8121908 11.4984167 11.571263 7.724728 9.763037 9.630282 8.160282 9.876269 5.154717 7.557618 10.970809 4.336162 3.684089 6.532083 6.800736 12.616005 10.541356 9.270765 7.117046 12.562881 6.412783 14.448523 10.409282 10.133647 9.244801 11.816604 9.491441 10.983425 9.304672 9.836733 8.633914 6.959944 10.887119 7.097835 11.060629 10.721907 7.165828 14.302078 10.127503 10.508636 13.208824 9.691794 9.978969 4.046657 TCGA-AR-A24X 52 0 NA 3004 breast stage iia t2 n0 m0 female 2006 NA no mixed histology (please specify) 0 white NA NA NA 2 3 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.774378e-07 11.21182078 10.24927253 12.17429106 9.83307018 8.26433093 9.87969903 10.54511652 9.14923777 9.51347081 8.77197370 11.78086165 10.44089833 -1.02561753 13.24577506 4.52890258 8.53273267 6.25043676 8.46616499 9.65730666 12.85475652 3.06177620 13.58193133 5.16413460 9.06574732 11.10841743 4.61816816 -0.02561753 10.58856174 9.92559672 2.29625182 8.32966316 7.58902188 -1.02561753 4.64673870 10.07365986 10.80205166 10.48359220 12.25334219 10.70393281 11.58349078 9.36555563 11.95212859 14.73097260 8.84244023 9.99459754 11.83636818 11.73959815 4.52890258 -0.02561753 9.23875462 11.48927262 -1.02561753 11.34853646 7.09843324 5.74249673 3.22223269 10.93793063 12.34077087 10.91755945 13.81891974 13.26361051 7.72250496 11.32773457 10.92566963 11.31999449 11.32414611 5.34935112 12.08495846 11.90910865 0.55924706 9.75074500 9.43066643 1.78580162 4.61816816 11.53225432 10.49640313 10.09907963 10.10166163 3.22223269 11.06838975 13.64773155 13.28733677 10.31638676 9.66692751 0.0070826 1.2828000 1.3131000 -0.0071958 -0.0071958 -0.0110600 -0.0059522 -0.0111980 -0.0111980 -0.0057692 -0.0057692 -0.0057692 0.0038854 0.0038854 0.0058309 0.0058309 0.0024777 0.0144700 -0.0123820 -0.0084385 0.0023581 0.0115390 0.0167050 0.0167050 0.0167050 0.0255310 0.0245070 0.0245070 0.0204830 0.0070826 0.0070826 -0.0094046 -0.0071958 -0.0110600 -0.0110600 -0.0059522 -0.0059522 -0.0111980 -0.0111980 -0.0111980 -0.0083132 -0.0027605 0.0162860 0.0069435 0.0069435 0.0069435 0.0069435 0.0038854 0.0162860 0.0058309 0.0058309 0.0024777 0.0024777 -0.0063875 0.0000000 0.0000000 -0.0084385 0.0023581 0.0115390 -0.7007400 0.0167050 0.0167050 0.0083351 0.0255310 0.0245070 0.0204830 0.0083351 -0.7278200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.78166691 12.59762200 8.40894024 9.31416199 3.64277087 10.52072425 2.29625182 -0.02561753 8.51347101 6.99668024 NA 8.20072405 0.97430904 10.38793998 9.42758271 -0.02561753 8.82136933 9.34717709 10.41518116 10.15484279 9.59971948 7.29172510 10.41258414 1.55929601 9.55268466 9.03635827 7.76872821 NA 10.23228912 2.88119474 13.13094819 11.89819660 7.27351962 9.95302248 7.77844318 9.13039501 4.97431363 -1.02561753 NA 0.55924706 8.43987825 8.53655457 10.51831049 3.55927154 7.97245084 4.64673870 10.64097984 6.34063348 9.48606471 NA 9.08935567 3.43374733 3.92851245 10.00098067 6.60585283 5.40057550 8.81508992 8.20793189 7.01870649 -1.02561753 14.17260360 -1.02561753 9.73420018 NA 9.59086097 3.43374733 8.13921878 8.61274799 13.004577 5.259713 8.988332 13.245775 10.458631 11.251018 12.854757 12.006013 9.605917 11.208231 13.965169 11.297648 9.238755 7.664310 -1.025618 7.429639 11.288612 11.41310390 8.52890101 9.28037363 9.11641908 8.95380882 10.82233636 6.54416696 5.31416357 11.78086165 6.12405926 4.06177620 7.37945375 6.00497996 12.34608867 10.30074150 9.48111545 8.18132621 12.42139526 5.54416696 11.55305738 10.48359220 10.15359915 9.76139831 10.93937477 9.18498342 10.79528877 9.88570400 -0.02561753 9.36918203 6.74249673 11.34853646 8.37945332 10.82906354 10.93793063 7.89615315 14.56781988 10.17949438 10.57143345 13.43194942 10.67475176 9.84313465 2.67475440 TCGA-AR-A24Z 57 0 NA 3001 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white NA NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 2.080784e-07 11.0451332 10.2235250 11.4709145 9.8317772 8.4894109 9.8098679 11.0509043 10.8181229 9.0402801 14.4062982 12.2251814 11.1227162 2.3323069 11.9077469 4.6802174 8.8058148 5.3322926 8.7767439 10.4391539 13.3247814 3.4578307 13.2715389 3.0823109 9.1001530 11.8315960 3.8270568 NA 8.2071354 11.2304140 -1.1272106 6.9656192 7.1466573 0.4578569 4.2991274 10.3176181 10.4204796 9.7140332 12.3675926 10.6751764 12.0107337 0.1948435 13.0171219 13.8496275 8.8863593 9.8153729 11.6994105 12.2813908 4.0021444 5.5523433 9.1588422 11.9178537 -1.1272106 10.8926264 4.0427844 6.3727084 4.5452889 10.5696122 12.3667800 10.3771845 12.5968429 13.1316121 7.8966164 11.4041216 10.8840369 11.3841205 11.6069365 4.7917255 12.1316488 11.3020072 -2.1272106 9.7906070 9.9426473 2.8021725 6.0021444 10.2282131 10.1163336 10.4994837 10.7876208 5.6344132 7.4653191 11.7006017 10.5730850 10.0737607 9.5140106 0.2961200 0.5290600 0.4079400 0.5343800 0.0468630 0.0037465 0.0088920 0.0280600 -0.0647770 -0.5436100 0.4737500 1.0780000 -0.0403450 -0.0147400 -0.5296100 2.2275000 1.5509000 0.4653600 0.4653600 -0.5658500 0.0748400 0.3499000 0.3931800 0.3931800 0.4429100 1.1967000 0.2996300 0.2996300 0.4773500 -0.0986820 -0.5300200 -0.0120240 -0.5875500 -0.0392050 0.4799300 -0.3500800 -0.3472100 -0.5973100 0.7115600 0.2622400 -0.0060990 -0.0265770 -1.1448000 -1.2929000 -1.2929000 -1.1084000 -0.0580580 -0.0147400 -0.0060904 -0.5564400 -0.1193900 -1.1335000 0.3672300 0.4653600 0.4323900 0.4391900 -0.5258300 -0.5712000 -0.1162600 -0.0308130 -0.5926300 0.3931800 0.5022100 -0.0482070 0.2996300 0.3885800 0.4631400 -0.6140300 0.000 0.000 -0.530 -0.530 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 0.209 0.000 0.000 -0.530 -0.530 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 0.209 7.7616051 12.4490511 4.8386442 9.2554861 3.5452889 10.0056831 0.6802343 NA 8.1408190 7.0798762 -2.1272106 6.2770660 -0.1272106 10.7636962 10.1671956 2.2651668 6.4578241 9.3368973 8.1959169 9.5810838 10.2122054 8.6210548 10.3343415 2.2651668 9.0060043 9.3276755 0.6802343 0.6802343 10.1481135 3.1207832 12.9009839 12.9900181 7.0124134 10.7795647 12.0549459 9.5355305 6.3404679 1.4578044 -0.5422481 3.1947962 9.0034325 9.4341499 10.6988146 3.1947962 8.6992198 5.3566791 9.8572805 8.6335820 9.8840893 -1.1272106 12.3704644 2.2651668 4.0427844 9.5848128 5.9768310 1.1947805 8.1231602 8.1880117 7.5185202 -1.1272106 13.1879408 NA 10.6656523 -1.1272106 7.3033150 4.0823194 8.9911542 8.7017920 15.038040 6.861547 8.366717 11.907747 9.865446 10.535753 13.324781 13.155190 8.575900 11.551242 12.952180 9.899040 9.158842 7.532858 1.042784 7.824147 12.486997 11.0530820 9.0008563 8.4312828 9.0682341 9.9869297 10.9664166 6.1064823 9.7362739 12.2251814 3.9813869 10.8177571 8.7547406 9.3779887 9.8039688 9.8597707 7.7767436 8.0490350 12.5884487 3.9172599 11.5222103 9.7140332 9.6782029 9.7257815 11.6178009 8.6101094 10.6410463 8.4578245 NA 8.4036290 3.3322926 10.8926264 6.3924977 10.5521222 10.5696122 7.8994548 12.4544745 10.4524136 9.1267094 13.4199975 10.3939716 10.1190088 0.1948435 TCGA-AR-A250 58 0 NA 2707 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 5.201959e-07 10.4068597 10.1613127 11.2921642 9.7348740 8.6090032 9.6610701 9.7957100 10.9592007 9.6492204 14.9940807 10.7044209 11.4642042 1.9497590 15.7899738 2.9497777 9.3316239 4.6815786 8.7179564 9.4370377 13.0893233 -0.2726458 13.5887250 -1.8577826 8.8480495 11.2293826 8.8376453 2.8972985 9.4473387 10.0605349 1.3123167 8.6282465 7.6442543 0.1424788 5.0612794 9.6733110 10.3160941 9.9875150 9.9988426 10.2132089 11.5580268 2.3123457 10.7729117 15.0711436 8.8145860 10.2414360 11.2255639 11.2361647 4.9237767 6.3712365 8.9521853 10.5007935 -0.8575212 11.1531200 9.9023052 7.2404489 5.0250598 10.6074732 11.9307275 9.9910399 12.1468131 12.6811516 7.5997976 10.8547291 10.2299064 11.6124403 10.7797212 5.0372328 11.5821181 10.6284979 -0.8575212 9.9093600 8.8411218 3.0998675 6.4552993 10.5315106 9.9327656 10.2295484 10.6718476 5.0127832 10.0038917 12.5927906 11.1534696 9.9473547 9.3718367 -0.597210 0.503480 0.474430 -0.046854 -0.116060 2.978800 -0.284890 0.381050 -0.608440 1.092100 -0.627790 0.192540 -0.198370 -0.198370 0.413290 0.362330 0.984940 -0.087447 0.290560 -0.200000 0.192490 -0.212680 -0.445990 3.656900 3.656900 -0.293070 0.215300 0.445960 0.339820 -0.660870 -0.607570 -0.026714 -0.046854 0.063080 0.285010 -0.284890 -0.284890 0.381050 -0.608440 -0.092478 0.124170 -0.028659 -0.609310 0.143250 0.143250 0.121610 0.121610 -0.198370 -0.198370 0.351040 1.114300 -0.616810 -0.616810 -0.087447 0.290560 0.290560 -0.224660 -0.205480 0.084354 0.237670 -0.445990 0.569170 -0.356580 -0.293070 0.672890 0.339820 -0.488900 -0.226990 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 0.000 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 0.000 8.8728872 14.0916282 4.9368311 9.9364267 3.2298801 11.1236275 1.1424134 0.4643546 8.2125382 8.5185426 NA 8.5284842 -0.8575212 10.5832862 9.0849317 0.4643546 7.2896224 10.1353554 8.9352072 9.6728234 9.3002061 8.2704112 11.4741737 2.4643546 8.6452488 9.8139582 3.6342680 1.4643546 13.4191231 1.3123167 11.5827672 11.7555158 7.9481610 9.7022721 9.3903446 9.9184387 5.5686828 2.3123457 -1.8577826 0.7273542 7.9416985 9.1758399 9.7562065 2.3123457 8.8921861 6.0250598 9.9689655 6.8906096 10.0735238 NA 10.9167923 3.7273759 4.6018510 9.4089869 6.1984038 5.8218964 9.0582965 9.0605349 7.9561984 -0.2726458 13.4834493 0.4643546 10.9425081 NA 8.2205679 5.0372328 8.3938997 10.2411071 13.805781 6.495564 10.222568 15.789974 9.764011 10.681576 13.089323 12.221485 10.198377 10.834161 13.307756 8.516370 8.952185 9.374838 NA 9.564482 11.558819 11.1883473 5.6342709 8.2934335 9.5070989 9.5910495 10.8243407 6.8077529 10.0227659 10.7044209 6.6737981 0.7273542 6.9368334 9.0117486 11.8781846 10.5765239 7.9481610 9.2437362 11.2321985 6.2138799 12.9575586 9.9875150 10.1820216 10.5631668 10.7630951 9.9937757 10.4691274 9.1717042 NA 8.8853160 6.7534414 11.1531200 9.5185424 10.4670505 10.6074732 6.6893117 12.8761209 9.7003593 9.8402535 11.9815224 10.4223177 9.9043837 1.1424134 TCGA-AR-A251 51 0 NA 3030 breast stage iiia t2 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.88413e-06 9.363527e-07 11.4733576 9.8930183 11.6430935 10.2263747 8.8250290 9.0203380 8.6936152 9.7383438 10.7829475 12.0067554 9.9187865 9.7734612 4.0510588 11.3168954 2.7046064 8.7013824 4.4082159 8.7155138 10.2299592 5.5640092 -1.4246877 9.7734612 9.9923844 9.5812669 11.3274947 8.4129508 2.4333067 9.9563252 10.4093990 2.0988911 9.9764693 9.1845017 -0.4246877 4.8607245 11.6328072 10.2692456 10.8838043 9.9265384 10.3881020 12.0815067 0.7452804 9.5378577 14.3937680 8.8184317 9.5777864 12.0770981 12.2112112 4.5178363 NA 10.6256819 10.1275118 1.8232602 9.5262433 5.7502501 6.6441014 6.3201561 9.2304065 11.5757633 10.4627341 10.7823374 13.1274218 7.6720384 11.1638035 10.2494447 11.4562458 11.3743011 5.8745314 11.8713072 9.2831136 7.6306057 11.1586409 10.9760692 2.7456461 5.6627866 12.1561116 10.4644467 12.1458311 11.1366110 3.9676390 5.3891056 12.9642821 11.4777924 9.8333001 7.9847141 0.055943 0.043723 0.435470 -0.366910 0.813180 0.064225 0.058795 0.026514 0.417470 -0.393410 0.853240 0.983690 0.919050 0.035383 0.088113 0.029747 0.058081 -0.381230 -0.383690 -0.387050 -0.373240 0.489060 -0.010508 -0.010508 0.006109 -0.061017 1.778500 -0.464510 0.817270 0.403110 0.455810 -0.414540 -0.404840 -0.449110 -0.405730 -0.849390 -1.292900 0.462120 0.029606 -0.429420 -0.013815 0.036370 -0.390510 0.074121 -0.368270 0.442460 -0.431920 -0.392680 -0.444260 -0.871820 0.000000 0.526780 -0.874630 -0.656400 -0.381340 -0.414320 -0.814740 -0.388580 -0.856390 -0.436800 0.392970 -0.010508 -0.870250 -0.073076 -0.464510 -0.376960 0.056940 -0.929860 0.853 0.000 0.000 0.000 -0.384 -0.384 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 -0.350 0.853 0.000 0.000 0.000 -0.384 -0.384 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 -0.350 8.2335344 12.4417810 3.6838424 8.6707200 4.3955016 10.8808149 1.8232602 4.9676390 9.4301914 8.0078649 2.0347439 9.2417601 1.9676482 10.8954184 9.4176734 5.8607245 9.3766273 10.0454736 7.4223802 8.3705510 8.6275992 7.3778395 10.6631174 1.6627980 9.0373141 9.9863044 1.3826673 NA 8.7798943 2.6197182 12.0699912 12.5476298 7.4472287 9.7737681 8.8029389 10.7468127 8.2433216 1.5753123 0.3827226 4.3955016 8.1222177 7.6073688 5.2964207 4.8421089 7.5226827 6.1413776 10.3262394 5.8882050 9.6877625 6.5266072 11.6430935 4.5865486 5.9062388 10.1483998 6.1395861 5.3826776 8.2290639 8.1008436 6.2548038 8.8053434 12.7907044 5.0265345 10.1320686 -0.1026821 11.5569795 5.7601997 8.7187062 9.4568195 10.761578 9.021889 8.729508 11.316895 9.729154 11.246311 5.564009 11.556712 9.677259 11.630078 13.095543 11.253483 10.625682 8.309186 5.725070 8.412162 11.928952 10.560809 5.847253 9.684827 8.931225 10.072676 8.810063 5.546867 7.280955 9.918786 7.979400 -1.424688 8.070179 8.948890 13.560276 9.919064 7.902876 6.561166 9.826214 7.098885 12.045733 10.883804 10.065171 9.616298 11.982923 10.801284 10.920867 10.085345 -1.424688 9.220837 6.346813 9.526243 8.159346 9.861950 9.230406 8.254037 13.573429 11.018137 11.077285 13.237018 10.194855 9.846202 2.482203 TCGA-AR-A252 50 0 NA 2838 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 3.467973e-08 10.8180495 10.7344587 11.9696264 10.7157714 9.0540768 10.0851035 9.9126677 10.9095598 8.3935891 14.7833621 10.4389458 11.0688777 -0.7548695 10.5565770 4.5305140 8.8300750 6.1277550 9.2750899 9.8135438 12.3537186 3.3325791 12.5138007 4.8450233 8.7369657 10.8281953 7.4739314 -1.7548695 10.2774613 9.4811268 4.3536338 8.0684795 8.2295307 -0.7548695 6.6417180 10.4275069 10.6198803 9.7573592 11.0927571 10.5072073 12.1575341 11.9086706 10.7266597 14.1500763 9.0681852 9.2188100 11.4349371 11.8232493 5.0264725 6.2949607 10.1691827 12.2312212 NA 11.7476957 6.8263133 8.8356996 5.4250228 10.8939194 11.9272293 9.9991649 12.1327139 13.1656049 7.4324642 10.8934701 10.7730488 11.7773466 11.5101414 5.2895062 12.4557838 11.1141279 -1.7548695 9.8281952 9.6255735 2.9472173 7.3999307 10.4853076 10.4763337 10.6100679 10.5938407 3.3325791 6.1154765 12.6466587 12.1822104 10.5004362 8.8943688 -0.1186000 0.1303600 0.1303600 0.0153080 0.0153080 -0.0557690 0.0098669 -0.1175700 -0.1175700 0.0114000 0.0114000 0.0114000 0.0114000 0.0114000 0.0104240 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1982500 0.0072217 0.0091705 -0.1532400 -0.1532400 0.8810600 -0.1220400 -0.1220400 -0.1220400 3.3987000 -0.1186000 -0.1186000 0.0000000 0.0153080 -0.0557690 -0.0557690 0.0098669 0.0098669 -0.1305500 -0.1175700 -0.1175700 0.0095883 0.0095883 0.0114000 -0.1169700 -0.1146900 -0.1146900 -0.1305700 0.0114000 0.0114000 0.0104240 0.0104240 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1119500 -0.2290800 0.0072217 0.0091705 0.0081959 -0.1532400 -0.1532400 -0.2481200 -0.1170400 -0.1220400 -0.1166500 -0.1119500 -0.1391000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 0.419 0.419 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 0.419 0.419 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 0.000 10.9168747 11.3830642 6.1876272 9.2908722 6.7731366 9.5357073 4.0000000 1.4150555 8.3071584 8.7538976 NA 8.5349814 3.7686713 10.2622688 8.8244283 0.2451305 10.8447929 9.5777085 7.5165754 9.5709801 9.6408288 8.0443941 10.7891110 3.8598205 10.3523296 9.5993619 4.8300727 -0.7548695 10.1512515 3.4545707 12.8322454 12.3096869 9.0248319 10.6204235 9.6771324 8.7198323 5.0524681 3.0000000 -0.1699070 0.2451305 7.8925707 7.6818238 10.3958118 6.8561379 8.9037436 5.4835159 10.1353767 4.8300727 10.1189411 -0.1699070 10.5130695 4.2223950 6.7086370 9.9666261 5.8553992 8.9610746 9.6147098 9.8445605 10.5954993 -1.7548695 13.4483075 2.3325647 10.4772336 NA 9.1676969 5.8375699 9.2273931 8.5385843 12.842783 5.567040 9.230243 10.556577 10.522400 10.516284 12.353719 13.423349 9.561298 11.333073 13.331041 10.178434 10.169183 8.163976 NA 8.449684 12.622459 10.761059 6.278535 9.367293 8.748938 8.297681 10.043414 8.304457 9.809262 10.438946 6.115477 3.374400 5.867165 7.761797 11.281973 11.365512 8.711699 7.938599 11.790560 9.981937 12.127671 9.757359 10.758593 9.776006 11.097837 9.578268 10.728424 10.129665 NA 9.779600 9.819233 11.747696 6.780388 11.003544 10.893919 7.759195 13.831659 10.258086 11.004377 12.496743 9.482323 9.680262 4.078003 TCGA-AR-A254 50 0 NA 2605 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 1 6 NA NA 2 2 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 10.7041119 10.1845032 11.6708048 10.2524197 9.0318594 9.4532912 9.4358402 10.3446265 10.1855838 12.7466465 10.2299015 10.5504322 3.2616662 16.8577761 4.2833662 9.6894601 5.6519041 8.6042170 7.6456368 12.3706706 -1.7828934 12.5890536 4.6767075 9.3159669 11.4238335 4.2616737 NA 10.8202889 10.4963070 3.6095895 8.2927560 7.7427978 -0.1977654 5.4169478 9.2493226 10.0161536 9.3984293 11.5546201 9.9077115 11.8469751 3.1241627 9.1967022 14.6776848 8.7632838 9.2867266 11.3447877 12.0047714 4.2396424 -1.7828934 9.2826930 11.4397700 -0.7826452 11.3298793 5.8683287 7.6909827 5.9587429 10.1931249 11.8485677 10.1579576 12.1200289 12.9078752 6.6224179 11.5297345 10.5309110 11.1603411 11.1480143 4.8466337 11.5173434 11.7066232 -0.7826452 9.5786725 10.8157947 3.1798295 6.3310190 9.1196521 10.2620126 10.6690032 11.0828169 0.8022346 10.4643144 12.7871918 12.1189924 9.7015964 8.5846916 -0.32063000 0.87429000 0.70721000 0.00552810 0.00417130 -0.09022100 0.29980000 0.00125610 0.00125610 -0.33248000 -0.33248000 1.91120000 0.34666000 2.74300000 -0.00566770 -0.00566770 -0.00566770 -0.34503000 0.00333800 -0.00649690 0.00264380 0.31836000 -0.32588000 3.65690000 0.29391000 0.00347680 0.00347680 0.00347680 3.48240000 -0.32680000 -0.28963000 -0.00220880 0.01196600 -0.09022100 -0.09022100 0.29788000 0.00222740 0.00125610 0.00125610 -0.00524920 -0.00040777 -0.00040777 -0.33761000 0.00125610 0.00125610 0.00125610 0.00125610 -0.32181000 2.40550000 -0.00566770 -0.00566770 -0.33386000 -0.01008600 -0.31995000 0.00333800 0.00333800 -0.31037000 0.00264380 0.31836000 -0.31318000 -0.32588000 -0.30227000 -0.00165480 0.00347680 0.00347680 0.23830000 0.00514400 -0.05160100 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.702 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.298 0.298 0.000 0.000 0.000 0.000 1.573 1.906 0.000 0.000 -0.190 0.069 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.702 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.298 0.298 0.000 0.000 0.000 0.000 1.573 1.906 0.000 0.000 -0.190 0.069 9.3007564 13.2706089 7.2002709 9.0983909 4.3872040 10.2568814 1.3871971 0.2172307 8.4291653 9.4574720 -1.7828934 9.0079024 2.9721596 10.3965640 9.3663889 2.4652170 8.5049894 10.0608055 10.0564807 10.1988442 9.2852489 7.7427978 10.4209308 3.6767075 8.4472973 9.5465127 3.7718645 NA 11.3701955 5.1241668 12.6864736 11.8652974 8.2980947 10.4675754 9.2493226 9.5032571 7.9986367 2.0246388 -1.7828934 1.9176991 7.5988200 7.4267302 9.2066715 3.9451957 7.1121548 8.0374558 10.0623749 7.4652048 9.4657976 -1.7828934 8.8584256 3.8896974 3.7091252 9.6481476 6.8927043 6.9519864 8.9400845 9.7270519 8.7535240 -1.7828934 14.0247325 0.5392333 9.8324467 NA 8.1196519 3.5748281 7.4675754 8.3959419 13.055496 5.945198 8.416949 16.857776 9.928944 10.698824 12.370671 12.077200 9.618156 10.761517 13.657173 11.651254 9.282693 9.921181 2.304745 7.903778 12.003955 10.898296 5.817191 8.280672 9.073702 9.336866 10.048509 7.090721 4.740841 10.229902 4.124171 2.217262 6.539205 7.976316 12.761034 10.681567 9.334680 8.218685 11.158508 7.583599 11.927670 9.398429 10.209861 10.058448 11.399516 9.684373 10.832447 9.530160 3.889697 8.615754 7.389704 11.329879 8.423070 10.692876 10.193125 8.187670 13.895354 10.131288 10.369562 12.790036 10.945835 9.959165 3.574828 TCGA-AR-A255 62 0 NA 2161 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 3 4 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 3.467973e-07 10.9070678 10.8230549 11.4210579 9.9653364 8.4074407 9.4554267 9.5318171 9.8988832 9.4630600 13.6916588 10.7544687 10.5965784 5.0535111 12.8503537 4.5408642 9.2030678 5.7298953 8.8492618 9.7719874 12.5596002 4.0669330 13.3467565 5.9630949 9.2530911 11.3025021 7.0535100 0.3120843 9.6646277 9.8656728 2.8356007 7.3176677 7.9720395 1.3120262 5.1700252 10.2828685 10.6229402 10.0735948 11.7482345 9.9147424 11.5754595 4.9267538 10.8771456 14.4421515 8.3790881 9.8287285 11.6091030 11.7829565 5.1824063 4.0933996 10.0756709 11.9774905 NA 11.3821645 5.5018690 7.4515952 5.1322231 10.6109652 11.6485501 10.5318170 12.2858305 13.1372011 7.5092604 10.8521716 10.2007753 11.6948026 11.1534113 5.8512018 12.7837822 10.6895252 NA 10.3985115 9.4316332 3.7523311 6.3835056 10.7216996 10.1657429 10.2068613 10.7248780 3.5215031 8.3176681 13.0497134 11.8447647 9.7918238 8.6783656 -0.3291100 0.4543100 1.5096000 -0.3460500 0.6666300 -0.3291100 0.3460300 0.3307900 -0.3473800 -0.7094200 -0.6794700 0.7895200 0.6528100 0.0125430 0.0069705 0.2972700 -0.3362700 0.0248560 0.0000000 -0.3350300 -0.2563200 0.0014137 -0.3569000 0.3078000 0.3078000 0.1422400 0.1422400 0.1422400 0.7183300 -0.3578100 -0.3291100 0.0068313 -0.3665900 -0.3291100 0.0104510 0.3460300 0.3460300 0.3307900 -0.3473800 -0.3473800 -0.3476500 -0.3460500 -0.7094200 -0.3339600 -0.3339600 -0.3339600 0.0054408 0.0125430 0.0125430 0.0069705 0.2972700 -0.3362700 -0.3526700 0.0248560 -0.0036289 -0.0036289 -0.3265600 -0.2984900 -0.3316500 -0.3622500 -0.3569000 0.3078000 -0.3324600 0.1422400 0.1422400 -0.0254560 0.0047459 -0.3581500 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.256 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.689 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.003 -0.328 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 -0.148 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.256 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.689 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.003 -0.328 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 -0.148 8.9967921 13.0820363 7.9756015 9.8043974 4.0933996 10.2734932 1.4819705 NA 8.0365572 8.5516421 -0.6880319 8.3119027 5.2662393 10.5697259 9.3881910 3.1700212 9.7892958 9.5414631 8.8666323 9.9822572 9.1232575 8.2560232 10.8548336 3.8356007 8.1543938 9.7341082 4.5018658 NA 10.0781583 3.0124793 12.2036374 12.0453767 8.6979058 9.7482345 11.1973586 9.4592484 7.7632549 1.4819705 0.6339426 8.1962141 8.5552176 7.6914218 10.8842701 5.4100765 7.2921256 6.8550753 10.0505580 6.6827306 9.6613247 -1.6877995 11.2781884 3.3995129 5.1193977 9.2628108 4.7793228 4.4413241 9.7730113 8.7549870 6.4819689 -0.6880319 13.5143969 1.6339891 10.0275765 -0.6880319 8.8108926 5.4719158 7.6739874 8.8208287 12.7177999 5.6957489 8.3901943 12.8503537 10.0361310 11.5130953 12.5596002 12.4332532 8.8178551 11.4372955 13.3056453 10.8225605 10.0756709 8.7745459 0.3120843 8.0467530 11.1017809 11.366139 7.364612 8.740404 8.724613 9.311339 10.208145 7.103206 5.771476 10.754469 6.651894 3.441324 5.904501 7.830933 11.743672 10.466545 8.101088 8.117787 12.945606 6.712923 12.945895 10.073595 10.442292 10.179322 11.290754 10.054353 10.872376 9.394193 9.430985 8.910515 6.425785 11.382164 8.138592 10.509005 10.610965 7.651893 13.275752 10.086831 10.301793 13.549851 10.550448 9.991963 2.119389 TCGA-AR-A256 45 1 2854 NA breast stage iia t2 n0 m0 female 2001 NA no infiltrating ductal carcinoma 0 white NA NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.439005e-06 1.387189e-06 10.3823150 10.4095604 11.6668559 10.4479603 8.1972796 10.1287798 8.5907049 10.9701530 9.9343907 13.5047377 9.6735359 10.7834537 2.3305584 10.8878411 4.1972835 9.9650371 6.9504428 9.0712199 11.8964884 4.3091762 -1.7568184 10.9070862 8.6797950 8.7369390 11.4753545 4.4525361 1.5650122 10.3864666 10.5669826 1.2430597 7.8448545 7.4933815 11.2353137 3.4910065 9.8678789 10.6211074 9.3031038 11.0626638 9.2668378 11.1167198 1.0504669 4.1257255 14.3149857 8.5368770 8.6407579 11.2949721 10.9152878 4.0504407 -1.7568184 9.5795901 11.4037428 -0.7568184 11.3615379 4.8280476 7.4079900 5.1134463 10.7286613 12.3577205 9.8058029 11.8105643 13.5740703 6.1439505 11.0737967 10.7071314 11.4059468 11.5430069 5.1257255 12.2970094 8.0260819 3.0504320 10.0342464 9.8882915 1.2592424 5.6777112 8.8005473 10.9851823 10.5728798 10.8552609 -1.7568184 6.9979709 13.5237455 11.6972542 9.7764131 8.3051297 1.2668000 1.9128000 0.8486900 -0.4633400 0.5218800 -0.4669600 0.0000000 -0.9672100 0.5638300 2.3747000 -0.0725410 2.0702000 0.6967100 -0.0083005 0.0686650 0.0331270 -0.4679100 -0.5141400 0.1644500 0.5539000 -0.4733200 -0.4585400 -0.4285500 -0.4285500 0.4432500 0.3886600 0.4194900 -0.0216470 0.4505400 -0.2450900 0.0345360 0.3499000 -0.4462000 -0.4810700 -0.9808300 -0.4767000 -0.2823600 -0.4102500 0.2134500 -0.4815500 -0.3560100 -0.5236900 -0.3413100 0.9667800 0.5915000 -0.0081624 -0.4658900 -0.0083005 -0.5863700 -0.4802900 0.0331270 -0.4386400 -0.4234200 -0.2029900 -0.7899200 0.8948700 0.0593660 -0.4465200 -0.4706700 -0.3278500 -0.4733200 -0.4154200 -0.0084385 -0.4789200 0.4041100 0.4310800 0.0619370 -0.5315100 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.461 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 0.000 0.000 0.000 0.385 1.091 1.091 0.441 0.441 -0.482 -0.482 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.461 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 0.000 0.000 0.000 0.385 1.091 1.091 0.441 0.441 -0.482 -0.482 6.9504428 12.7067994 1.5650122 8.9996398 1.2430597 10.3512811 -1.7568184 1.2430597 9.0439834 9.1544754 -0.1720184 9.4282624 0.2430597 11.1636224 9.6343270 -1.7568184 6.2430826 11.2903778 5.8797082 9.1597094 9.4901032 6.6311014 11.7358129 2.0504320 9.1863309 10.0149855 0.8280628 NA 9.2487080 3.0504320 12.8487945 12.3971896 6.7548367 9.5695129 9.4123821 10.2857689 2.4129983 2.2430902 -1.7568184 -1.7568184 8.2765064 6.5377045 5.5192085 2.7025246 7.9143235 7.3278921 9.6709200 7.4054751 10.0435790 6.6818751 12.5692320 2.9435276 3.7025135 10.6957263 6.6937992 1.2430597 8.3024278 7.3411158 1.4129983 5.0244438 13.4671982 -0.1720184 10.8662791 NA 8.1855980 3.6006385 7.2088674 6.3979022 11.515904 9.172342 7.888742 10.887841 10.183397 11.543579 4.309176 11.110555 8.432908 10.401378 13.901602 13.514802 9.579590 7.440300 1.828063 8.590705 11.461647 10.0747865 6.5514222 9.1841310 8.7715377 9.0917064 9.5170829 5.9084190 3.9155113 9.6735359 10.6396883 6.8760785 6.4476552 8.7291241 12.9108049 9.6028330 8.6619900 7.1559728 9.2949722 4.9710055 10.9228230 9.3031038 9.9837075 9.5514226 11.9762047 11.5048846 10.8747153 9.5745602 -0.7568184 8.9060722 1.8280628 11.3615379 6.9811757 10.2007188 10.7286613 8.6269282 14.2825166 10.9684497 10.9489318 12.4930117 10.6953247 9.2501108 NA TCGA-AR-A2LE 69 0 NA 5062 breast stage i t1 n0 m0 female 2001 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.421462e-06 2.60098e-06 11.2295384 10.2187047 11.9030685 10.4233823 7.8674820 9.5362764 10.9219300 9.7669554 10.4212838 9.8873818 11.7921425 10.3883611 -1.0028883 13.0057212 3.9040120 8.1519354 4.9971162 8.3369675 9.0346645 12.8838619 0.9971117 14.0354364 7.9337556 8.3503965 10.4144427 6.2917380 NA 8.4107456 7.8519857 2.6975514 7.1720434 6.5970305 NA 4.6975570 10.3369675 10.7499163 9.3246702 12.3210167 10.1557272 12.0999134 0.9971117 12.1342688 14.5429266 7.5757540 9.3369675 10.1115105 11.6244234 3.5820742 -1.0028883 9.2650747 11.9208164 1.5820742 11.3607047 4.9513127 5.0632052 3.6975626 10.4080987 12.2597996 10.1838508 12.2481560 12.9494037 7.5895747 10.9932379 10.6954445 11.9951790 11.7010211 5.7113627 12.7341535 12.3036065 -1.0028883 9.4698083 9.0277847 3.8054988 4.8044718 10.0578135 10.4874670 10.4657416 10.2162861 1.3190398 6.4809340 14.2358954 10.8793784 9.8323783 9.0208719 0.0069435 0.6503800 0.6503800 -0.0045695 -0.0165200 -0.0137170 -0.0011087 -0.0047079 -0.0047079 -0.7026200 0.0230050 -0.0047079 0.0080567 0.0080567 0.0055957 0.0055957 0.0055957 0.0000000 0.0000000 0.0025651 0.0086135 0.0148880 -0.6740700 0.0161460 0.0161460 0.0297120 0.0297120 0.0256710 0.0301690 0.0069435 0.0069435 -0.0051227 -0.0045695 0.0055529 0.0033299 -0.0011087 -0.0011087 -0.0047079 -0.0047079 -0.0047079 -0.0008316 -0.0008316 -0.7026200 0.0111210 0.0111210 0.0111210 0.0111210 0.0080567 0.0080567 0.0171240 0.0055957 0.0133530 0.0133530 0.0000000 0.0000000 0.0000000 0.0025651 0.0086135 0.0193630 -0.6952300 -0.6740700 0.0161460 0.0179630 0.0297120 0.0256710 0.0036076 0.0119580 0.0397610 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 8.380821640 12.613896051 4.084583065 9.424430234 2.264656525 9.862850724 0.997111721 -0.002888279 8.191874496 6.771904061 NA 7.687115292 1.804466643 9.532392942 9.900999300 -1.002888279 8.888901206 9.660675529 10.601207340 8.520679569 10.108018379 8.167042243 11.176093531 2.697551439 8.984381430 9.577376142 3.084574562 0.582074221 10.399596660 4.423383199 14.328909185 12.096794039 8.412859415 10.636005905 7.464722988 8.780115837 2.697551439 3.167036722 1.319039816 NA 7.900999602 9.534335958 12.439283460 4.126402998 6.681655872 7.697556999 9.663341417 8.033290840 9.746986857 -1.002888279 11.731615432 2.319039816 5.300899788 9.821288645 6.251484304 3.997120756 8.822076199 7.683617862 5.167040738 1.582074221 14.744418866 1.582074221 9.722483785 NA 8.073933207 6.372156377 7.385135047 9.042877126 13.782621 4.904007 8.608142 13.005721 10.777247 10.968661 12.883862 13.917610 9.272078 11.248008 13.184933 11.927855 9.265075 7.791533 -1.002888 7.637362 12.216437 10.774372802 8.116058513 9.205351944 8.987221370 8.524594603 10.401274523 6.345845196 6.291737994 11.792142481 5.951312694 -0.002888279 6.683617862 5.351497593 12.953039782 9.977971049 7.516753488 8.578317964 12.451673834 5.336968862 13.336865222 9.324670215 10.051043314 9.632835656 10.300898187 9.718216733 10.627839627 9.779296661 -1.002888279 9.053890594 4.778476691 11.360704728 5.817295800 10.907760233 10.408098721 7.225936194 14.918168074 10.835927468 11.065223987 12.597495047 9.760329910 10.467776402 1.997111721 TCGA-AR-A2LH 55 1 616 NA breast stage iii t3 n3 m0 female 2007 NA yes infiltrating lobular carcinoma 29 white not hispanic or latino NA NA 2 4 NA NA 3 6 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.040392e-07 10.2666240 9.3864995 11.6368705 8.7867283 8.2474082 9.2436596 10.1506335 9.6451830 11.6986481 10.6289888 10.6342480 10.2247676 1.0724489 12.7110318 3.1599520 11.1542990 6.0948504 8.6816615 7.8340342 11.6123685 0.6574571 11.8864643 7.6309034 9.4786877 10.5758116 7.0554766 -0.9274140 13.9284705 10.6058125 2.3944044 7.8505600 7.0497625 -0.9274140 4.9053750 9.7607331 9.5050247 9.3227811 11.0204849 9.3977882 10.9827507 -0.9274140 9.1966041 15.1934496 6.7592637 10.6058077 10.8029529 10.3126778 5.1168762 5.1810071 8.4388052 13.8109973 -0.9274140 10.8248634 6.4388052 6.9913461 4.3204125 9.6337707 11.5444119 10.1953108 12.1238616 12.4235600 7.3671037 11.1072817 10.6279682 10.8410807 11.1764262 4.1599440 10.9619867 11.1114017 NA 10.4437149 9.1810071 3.2424043 6.0948504 10.7338155 9.5573057 9.9069539 9.6649398 2.6574342 10.8534325 13.0646245 12.8899661 9.8990312 10.0017412 0.0765660 0.0765660 0.0298760 -0.0879770 -0.0879770 -0.0226060 0.0444320 0.0041632 0.0041632 0.1058500 0.1058500 0.1058500 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0922130 -0.0257560 0.1111100 -0.0922130 -0.0922130 -0.0922130 -0.0176660 -0.0176660 -0.0176660 -0.0246610 0.0765660 0.0765660 -0.0204120 -0.0879770 -0.0226060 -0.0226060 0.0444320 0.0444320 0.0041632 0.0041632 0.0041632 0.0467000 0.0467000 0.1058500 0.0418830 0.0418830 0.0418830 0.0418830 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0580580 -0.0922130 -0.0257560 0.1111100 -0.0992090 -0.0922130 -0.0922130 0.1084400 -0.0176660 -0.0176660 -0.0246610 -0.0263040 -0.0221950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 10.07950998 11.84190741 5.35788625 9.31208131 5.94284758 11.20047707 6.08370908 -0.92741395 9.20047713 9.63663223 -0.92741395 7.94592660 4.93046296 10.29829265 9.59015212 1.87982337 10.15928241 9.48822457 10.48187368 9.58225773 9.85157010 6.54008773 11.30340382 3.97937603 9.25114768 10.25549778 7.19660409 NA 10.75152297 3.77292023 13.03844736 12.60142516 8.53600704 9.95130002 10.65462475 9.40563802 4.43003766 1.39440439 0.07244885 2.87984297 8.58027741 10.12301172 9.56132709 6.30130230 9.28479681 7.61551488 9.90932204 7.05547659 9.41121924 NA 10.60240130 2.53191789 5.09485255 9.26238148 6.34039314 7.39441125 10.92032308 8.91797290 9.79358201 2.53191789 13.59537074 2.07248315 10.53702849 NA 7.45618683 5.85384349 7.81394982 9.22603473 10.722803 7.196604 8.443170 12.711032 10.052622 10.559820 11.612369 10.341025 9.218415 10.316252 13.396312 11.389047 8.438805 8.764226 1.394404 6.997296 11.182966 11.328691 5.813950 9.281936 8.955126 8.209474 10.178444 8.705478 7.460500 10.634248 8.544158 -0.927414 6.853842 7.862082 12.028496 10.955508 8.221391 9.201766 10.248032 8.020850 11.353338 9.322781 10.430035 9.635679 10.966922 10.714534 10.619377 8.653683 9.454026 10.526633 9.092073 10.824863 5.853843 11.034656 9.633771 7.744979 13.905661 10.302503 10.398912 12.633890 10.769016 9.154632 2.657434 TCGA-AR-A2LJ 40 0 NA 2632 breast stage iiia t3 n1 mx female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 6 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 8.8651768 8.1447444 11.0512021 6.3254440 8.9065846 8.6865289 9.7695273 9.1957433 10.9221265 11.8974672 11.8000617 9.9817645 0.7632416 16.1612017 2.0851187 11.2369070 8.6133880 7.8899055 8.1030512 12.4671049 1.7631991 13.6530379 5.0486024 10.1659256 10.1878924 3.1555226 NA 11.4968522 9.0004113 1.5705601 9.6343364 5.8924833 NA 4.0851272 8.7042488 9.4142529 8.9331262 9.7883409 8.6894973 9.7064487 3.8924882 10.8792202 14.7036525 5.9806263 10.5535498 12.4688337 9.6633133 5.3925579 0.7632416 7.3254440 10.4164942 NA 10.6000407 6.2709961 6.2226326 6.8400163 9.4133554 11.7188512 10.7820969 11.7445902 11.6717816 8.9281082 10.3283033 10.2470170 10.3115416 10.1778865 2.3481758 11.7912800 12.4897388 1.3481758 10.8618913 8.2185284 4.2550550 5.3481651 10.6787073 9.4034463 10.0247086 8.3158705 3.4636355 7.3216224 13.3210239 12.5923294 9.7751273 9.9902155 -0.00650500 0.42654000 0.42654000 0.00013863 0.00013863 0.00166420 -0.00539920 -0.00842210 0.00847430 0.00000000 0.00000000 -0.02477000 -0.00207840 -0.00207840 0.00180300 3.65690000 3.65690000 0.00124810 0.00124810 0.00374650 -0.01064600 0.00346870 -0.03067700 3.65690000 0.34145000 -0.01945200 -0.01945200 -0.01945200 -0.00373950 -0.00650500 -0.00650500 -0.01064600 0.00013863 -0.03408600 0.00166420 -0.00539920 -0.00539920 -0.01700800 0.00847430 0.00541390 -0.00981850 -0.00981850 0.00000000 0.00875280 0.00875280 0.00875280 0.00555960 -0.00207840 -0.00207840 -0.00251950 0.00610900 -0.43756000 -0.44620000 0.00124810 0.00124810 0.00124810 0.00374650 -0.01064600 0.00346870 -0.56020000 -0.44749000 -0.01986300 0.00027593 -0.01945200 -0.01945200 -0.00373950 0.00138680 -0.00539920 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5889552 13.8380953 8.2630471 10.7663678 5.5445596 11.1414961 3.2226346 1.3481758 9.5976723 8.6850420 -0.2368434 7.0102271 4.3177888 10.2369070 9.1458252 4.4356286 8.4124576 8.8075955 12.4463056 11.5379883 9.6196034 5.9628729 10.7653130 3.5180945 9.2154425 10.5351034 4.9726559 NA 11.4407007 3.7631991 13.1931964 12.6334697 7.5608624 9.8506641 8.4178373 10.1113762 2.4636486 3.2867629 1.0851527 2.2226191 9.7862626 11.0848476 9.5511038 5.4356253 7.0387676 8.3158705 9.8957010 5.0851314 9.5632922 NA 10.8211930 1.9331194 3.1555226 9.4888827 6.8875289 5.0669804 9.5559915 9.3023602 9.1207532 5.2867629 14.4173897 NA 11.1058316 -1.2368434 7.7115686 6.0578228 7.7260976 9.8486738 15.852436 5.962873 8.208216 16.161202 9.904031 10.745482 12.467105 10.886999 12.028599 9.804860 12.916357 11.173918 7.325444 9.491122 2.463649 7.989614 9.305266 11.3013902 4.4636421 8.6164952 8.7159424 7.4705605 10.0046423 8.0555227 6.9281085 11.8000617 8.8034909 3.2867629 8.4016373 6.6379985 10.7372573 10.2857828 8.5608628 10.1333438 6.4566879 6.3779115 11.2763515 8.9331262 10.7515309 10.6674596 9.8506641 9.9817645 10.3700691 5.9823707 -0.2368434 9.2924268 7.0439722 10.6000407 6.8612333 11.1786790 9.4133554 6.5576169 14.7020457 10.3802095 9.9829748 12.3975586 11.3275890 9.0428118 1.9331194 TCGA-AR-A2LK 62 1 1649 1304 breast stage iii t3 n2 m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 1 2 NA NA 1 1 3 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 11.1287489 11.2160391 11.9594717 9.7960213 9.2323346 8.2388743 9.8276981 9.9487633 8.6235073 12.8853380 12.0473679 10.9898362 3.7397509 12.4549352 4.6378710 8.8931899 4.1872135 8.9606811 9.0924987 13.3541283 4.3026919 13.8211760 3.7721707 9.4746597 11.9701011 4.0082448 0.6022668 11.1460567 11.6690115 1.8652854 7.6897122 7.0014206 -1.7197563 4.5091384 10.2253995 10.9503138 10.0860653 11.7348778 10.2810258 11.5301757 0.6022668 11.8744128 14.7331258 8.8429933 9.2279583 11.9704286 12.2578698 3.6022549 NA 9.8922685 12.0828379 -0.7197563 10.7671565 5.0616812 6.4300695 5.8727795 10.3427050 12.0903910 10.5494482 11.6563112 12.7206716 8.3664577 11.2595680 11.0076804 11.2992171 11.4139454 5.7960214 11.9258673 11.7876206 NA 10.6926267 10.1724848 2.3686287 6.1005005 10.9885433 10.1736230 10.4973705 10.9549552 6.3247152 5.4096048 12.2432175 11.2097648 10.5332825 9.0141843 -0.346530 0.851060 0.851060 0.076937 0.048688 0.072253 0.752610 0.088258 0.088258 0.603770 1.499800 1.513700 -0.317100 -0.313190 -0.010922 3.656900 -0.483650 0.096670 0.096670 -0.379880 0.460240 -0.355900 0.482680 0.482680 0.482680 -0.298630 -0.298630 -0.298630 0.569880 -0.346530 -0.346530 -0.350550 0.080168 0.072253 0.072253 0.752610 0.752610 0.088258 0.088258 0.088258 -0.381900 -0.385930 -0.499020 -0.352590 -0.352590 -0.352590 -0.352590 -0.313190 -0.313190 -0.010922 -0.455760 -0.483650 -0.483650 0.096670 0.096670 0.096670 -0.379880 0.460240 -0.355900 -0.354070 -0.223420 0.482680 0.094346 -0.298630 -0.298630 0.569880 -0.340560 -0.297920 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 0.000 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 0.000 8.5223045 13.0495912 7.4897749 10.2073587 2.6595364 10.5622515 -0.7197563 NA 8.2080992 7.8194804 NA 8.3217067 1.6022668 9.9304757 9.0787934 3.9807657 7.8463755 9.7671565 8.1163720 10.6296027 9.3538404 7.8252857 10.1355794 4.0082448 10.4467985 9.4514984 1.2803031 NA 11.1547266 0.8652854 11.8057200 11.8076763 7.0150314 10.5240905 7.9842253 9.0575767 5.4300678 1.8652854 -1.7197563 7.5019088 9.1834503 8.9606811 9.9924185 2.9241759 8.2878393 7.1445073 10.3372979 6.6422655 10.2841908 NA 11.1516492 2.8038883 3.5657190 9.3047063 5.3009144 4.5091384 9.1210993 8.6201714 6.0082426 -0.1347938 13.3619298 0.6022668 10.2866476 -1.7197563 8.2489883 5.0616812 8.4664358 8.6971191 16.168949 6.193210 8.741801 12.454935 9.572643 10.936523 13.354128 11.921809 8.682268 11.301128 13.135093 11.908311 9.892269 10.020946 2.672629 8.001421 11.750345 10.883252 8.295736 8.542416 9.281730 10.383937 10.398192 6.880235 4.087675 12.047368 6.547107 1.087667 6.041874 8.496692 10.672102 9.496461 10.437984 8.691832 13.243759 5.074737 13.086116 10.086065 10.603095 9.634020 11.719893 9.845424 10.444600 9.163728 -1.719756 9.135984 5.021791 10.767157 7.760102 10.055109 10.342705 7.770170 13.630570 10.128944 9.763130 12.886264 10.291549 9.477538 1.280303 TCGA-AR-A2LL 70 0 NA 2012 breast stage iib t3 n0 m0 female 2007 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 10.2958145 9.8849144 11.6149224 9.2357464 9.5279991 8.8677359 10.2937414 9.0088838 8.5272936 9.4696933 10.8755193 10.4139028 2.6175806 14.0637783 4.1150749 10.0847029 5.7000401 8.5881056 9.0507327 13.4110367 2.7780403 13.9725716 4.4843122 9.2080539 11.5612983 4.8876666 0.1150332 11.6030003 9.5244675 1.9895387 7.6490549 6.5413414 NA 3.3880931 9.4564101 10.4081650 9.1820626 10.6804960 9.9143581 11.4158104 -1.4699293 12.1119031 14.3429932 7.7317480 9.5350368 11.2563322 12.0985452 4.4843122 NA 8.9267188 10.8537318 NA 9.9495476 5.0058491 6.5413414 6.5908101 10.3641899 11.8036182 10.7303997 11.8632694 12.8248066 8.7517010 11.1328129 10.6680178 11.7051957 10.6817649 5.1300289 12.3863450 12.2640826 -1.4699293 10.5583654 9.8677359 3.6676197 5.5073951 10.0663613 9.5510940 10.9487573 10.9389745 2.1150665 6.3502921 12.6669450 12.4803054 10.0526956 9.0078722 0.76964000 1.25920000 1.25920000 0.16640000 0.15084000 0.17106000 0.25805000 0.17935000 0.17935000 -0.54229000 0.84929000 2.28150000 0.81845000 3.65690000 -0.43105000 0.50116000 0.05850900 -0.10788000 -0.10788000 -0.67085000 -0.03081300 -0.08572200 1.23730000 1.23730000 0.52415000 0.00000000 0.00000000 0.00000000 0.38006000 -0.41080000 -0.44491000 -0.04061600 0.15084000 0.20916000 0.17106000 0.25805000 0.25805000 0.17935000 0.17935000 0.15906000 -0.04617700 -0.08638600 -0.54229000 0.09318500 0.09318500 3.65690000 -0.56157000 -0.73108000 -0.75323000 -0.43105000 -0.05334100 -0.77897000 -0.77184000 -0.10788000 -0.10788000 -0.10788000 -0.05563400 -0.03081300 -0.08572200 -0.74260000 -0.73885000 1.23730000 -0.06155500 0.00000000 0.00000000 0.38006000 -0.00013862 -0.05739900 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.671 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 0.000 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 0.000 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.671 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 0.000 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 0.000 8.4400070 12.3242252 9.5016575 9.7886800 3.4220177 10.3558678 1.7000401 NA 8.6347127 6.9563785 NA 6.4726291 3.8520388 10.1671917 9.5662876 4.7968988 8.1558231 9.3661644 9.2296865 11.3308118 9.7161788 8.1018664 9.1484995 2.0760802 9.1739701 9.7075336 2.9895387 NA 11.6587528 1.8520388 11.5614706 11.6514856 6.5131070 10.5141764 8.4035583 9.3732499 3.2305566 2.9224262 0.8520788 7.0339394 9.1874325 9.6471078 10.0012811 3.5745133 7.5976288 8.1207013 9.9315269 6.7248712 10.3358579 NA 11.3777587 1.5301207 4.7589321 9.5297759 5.6136466 4.6175747 8.3293954 8.7969004 6.9647417 -0.4699293 13.3455974 0.8520788 9.8599104 -1.4699293 8.8373148 4.1150749 7.9094923 8.6581083 13.978908 5.541341 8.527294 14.063778 9.297471 10.454927 13.411037 12.549010 9.307369 10.547270 12.985120 11.341288 8.926719 9.678591 2.617581 7.593509 11.445246 10.5009390 8.1374441 8.4142844 9.0209649 9.8126234 9.6896259 5.9895455 4.9224310 10.8755193 6.4370046 0.1150332 6.4958982 6.8847603 10.6255111 9.9024350 9.4784813 8.9384437 12.1502193 5.3630028 12.0814101 9.1820626 10.2309872 10.5607811 12.2971605 9.0259689 9.8497862 8.1337402 NA 8.6742241 5.6899840 9.9495476 6.4127578 10.2527722 10.3641899 7.4784817 13.2759984 9.8062385 9.6548816 13.0412490 10.7146795 9.3566626 1.9895387 TCGA-AR-A2LM 49 0 NA 1935 breast stage ii t1 n1 m0 female 2007 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 10.8531583 10.3565798 12.4700463 10.2466733 8.1198277 9.2589087 10.5714897 9.9172266 10.2182053 9.9486689 11.0012395 10.6327820 4.6236269 13.4553841 4.5317058 9.6910450 7.1906682 8.7058421 10.1576059 12.9507779 2.8073343 13.6122418 5.9632568 8.8866989 10.7821279 4.9131336 -1.7164338 9.6772642 8.5340756 4.8073395 7.8911075 8.2681958 -0.1313132 5.1039550 10.4433333 13.3098252 9.4461685 12.8836320 10.4962737 12.0473009 12.4111268 11.5490993 15.3438821 8.9698139 10.0544411 11.3659263 12.1012606 5.0781914 2.8687460 9.7478125 11.6446244 -1.7164338 11.5786852 5.4537019 6.2724618 4.9980240 10.4871252 11.9217606 10.7658289 13.1358678 13.2358815 8.6291825 11.3454860 11.1117590 11.7272389 11.5151485 5.7836243 13.0061579 13.0592332 0.8687658 10.2104439 9.0218694 4.1001198 5.4436497 10.1876591 10.7228290 10.0614436 9.9548760 3.5691751 9.7736252 14.8212384 13.1966666 10.4809940 10.1405918 0.00097064 0.96658000 0.96658000 -0.00581400 -0.00581400 -0.00622860 -0.00152430 -0.00761010 -0.00761010 0.00027728 0.00027728 0.00027728 -0.00138580 -0.00138580 0.00527490 0.00527490 0.00527490 -0.55607000 -0.02164700 0.01782400 -0.00429290 0.00277450 3.65690000 0.00791750 0.00791750 0.02370600 0.02370600 0.02370600 0.01712400 0.00097064 0.00097064 0.00000000 -0.00581400 -0.00622860 -0.00622860 -0.00152430 -0.00152430 -0.00761010 -0.00761010 -0.00761010 0.01698500 0.01698500 0.00027728 0.00058312 0.00058312 0.00058312 0.02104300 -0.00138580 -0.00138580 0.00527490 0.00527490 -0.49861000 0.01684500 -0.55607000 -0.00360110 -0.00360110 -0.02054900 -0.00429290 0.00277450 -0.55246000 -0.53916000 0.00791750 0.01405100 0.02370600 0.02370600 0.01712400 0.00513590 0.01670500 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3172003 13.5900170 9.1518281 10.3652607 2.5765705 10.8088086 0.2838033 NA 8.3268047 8.9058292 -0.1313132 9.1572444 3.3281758 9.5795462 9.7005748 1.8687263 9.3458235 9.8335620 12.7609031 9.3336259 9.7547157 7.9824820 10.2841295 3.9562054 9.1316175 10.0214471 4.5505621 -1.7164338 10.6244619 4.4130592 11.8675652 11.8272925 8.2350621 10.4354282 7.8229360 8.9526623 7.2724618 1.4537019 1.6056840 8.4599504 8.3909943 8.9772642 9.8752997 5.3923002 8.5659737 6.1166683 9.7406450 7.1448642 9.3632620 NA 10.9417655 4.0117014 5.1541417 9.7354469 6.1784139 3.8687361 9.5095872 7.6500996 5.6236269 -1.7164338 13.4137042 0.2838033 9.9526623 NA 8.5760988 5.1039550 8.0846771 8.4309823 12.4415190 4.6236269 8.1119139 13.4553841 9.8004622 10.4471125 12.9507779 12.7013002 9.3672566 10.8400438 13.6702797 10.4962737 9.7478125 9.4297095 -0.7161967 7.1785951 11.5963767 11.5408704 7.7287919 9.0781932 9.3103008 8.1510561 10.7064833 7.2495620 6.0184873 11.0012395 7.2581919 4.2837736 8.2233564 6.2922627 12.9967878 10.6760947 8.4036652 7.9473354 13.5974044 5.5029447 11.8023665 9.4461685 10.1103258 9.6658608 11.5229282 10.1622114 10.5564071 9.1951692 0.2838033 8.8829927 5.2262927 11.5786852 8.6236273 10.9115392 10.4871252 7.7756307 13.7841514 9.7173627 9.9911365 13.1121617 11.2137753 10.0810334 1.6056840 TCGA-AR-A2LN 65 0 NA 1161 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.161568e-07 10.8757612 10.3497948 11.8706271 10.0117886 8.4415200 9.1747876 10.9494414 9.6968394 10.6511605 11.0655741 11.7585925 10.4467043 6.4484286 12.7116302 4.4392109 9.6436555 6.8680533 8.9351674 10.2746934 12.6502869 3.0607046 13.9431884 8.0606981 9.4601085 10.2412704 4.6132370 NA 11.7091109 7.1368015 5.4757367 8.6987720 8.2882340 0.1538053 5.1982034 10.4363169 9.9906469 10.2662471 12.2549626 10.3766025 11.9209575 4.7387678 10.2610246 15.0811689 8.2461420 10.4432501 11.5613409 11.3981714 7.4392100 1.9611788 9.6234493 12.2822853 NA 11.1025398 5.8680521 6.4847246 5.1538094 10.2629853 11.8424950 10.2623320 12.3827766 13.0452116 8.1566226 10.5525512 10.5443098 11.4123736 11.6032142 5.1761751 11.6727066 10.2077334 1.7387678 10.4598693 9.0071173 4.9632198 5.5113605 10.4246869 10.2863073 10.3796175 9.6019240 4.6773673 8.9384425 13.9372663 13.2416848 9.7740275 9.6152870 0.0093098 0.3605100 0.3605100 0.0048579 -0.0076857 -0.0070576 -0.0008316 -0.0060904 -0.0060904 0.0000000 0.0000000 0.0000000 0.0052749 0.0052749 0.0036076 0.0036076 0.0036076 -0.0011087 3.0089000 -0.0049844 0.0013868 0.0151680 0.0175440 0.0175440 0.0175440 0.0140510 0.0140510 0.0140510 0.0181030 0.0093098 0.0093098 -0.0031859 0.0048579 -0.0070576 -0.0070576 -0.0008316 -0.0008316 -0.0060904 -0.0060904 -0.0060904 -0.0011087 -0.0070416 0.0000000 0.0058309 0.0058309 0.0058309 0.0058309 0.0052749 0.0125160 0.0151680 0.0036076 0.0036076 0.0036076 -0.0011087 -0.3757200 -0.3716600 -0.0049844 0.0013868 0.0151680 -0.3725600 0.0175440 0.0175440 -0.3947500 0.0140510 0.0140510 0.0181030 0.0038854 0.0373590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7462646 13.4528725 5.9992965 10.9514691 4.9086928 10.6173320 5.6616014 3.4757334 8.3534799 9.3149394 -0.8460650 9.3458909 5.4936569 9.2557832 9.8620293 3.0607046 10.4547320 9.4123736 11.9504556 9.9070243 9.5602252 8.2779290 11.7368903 4.8262332 9.5190364 10.1727033 4.6456613 NA 10.7103136 5.2198965 13.0324333 11.9357820 8.3534799 10.3993603 8.6396370 8.7886185 5.6773701 1.7387678 1.9611788 2.9611603 8.0874984 9.6203940 10.6541516 7.0786205 7.8295179 6.0606981 9.8628915 6.5884358 9.4757357 0.1538053 11.9312684 6.2830902 5.6295402 9.2569380 6.1658175 6.5201299 10.5631986 8.8935882 8.4415200 4.7083969 13.7513946 3.6773729 10.2616785 NA 7.7274549 6.4111957 7.7831639 8.9120309 12.558638 3.854245 8.045591 12.711630 10.419253 9.886823 12.650287 12.525856 9.181409 10.994979 14.044167 11.933937 9.623449 8.546125 1.738768 7.801266 11.737125 11.327797 8.535350 9.173398 8.439210 7.453015 10.624680 7.617332 7.406473 11.758592 7.176175 4.613237 7.131087 5.687525 11.669754 10.357767 7.723663 8.217203 12.657882 6.980356 12.927141 10.266247 10.335581 9.524495 11.689083 10.742054 10.686164 9.385029 2.854255 9.244463 7.613239 11.102540 8.093387 10.765390 10.262985 7.515751 14.152442 9.983530 10.555754 12.794843 10.491987 10.091181 2.323745 TCGA-AR-A2LO 46 0 NA 1198 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 6 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 10.41269982 10.03592655 11.51574640 9.99802466 8.31254266 9.26395458 9.82583348 9.50940607 10.35841923 11.02778673 12.15622788 10.39023851 3.79363582 12.92024350 3.68260700 9.82909558 6.36966365 9.07492068 9.06803444 11.80817176 3.03875222 13.30252979 6.55444764 9.29495588 10.91718125 7.02743165 0.03871711 10.88226781 8.49817865 4.03874344 8.74091980 7.84931877 2.49817426 5.41378700 9.77006621 9.98492239 10.18658796 11.42918483 9.66445600 11.58250397 3.03875222 10.48324443 14.73277846 8.27119221 10.10341581 11.64051790 11.39602422 5.24820084 3.43106128 9.21492036 12.02049276 NA 10.31195988 5.96948438 6.89672837 5.08314102 10.33852748 12.11205190 10.18276802 12.55801478 12.81723497 8.22362237 10.89439429 10.83250081 11.29495583 11.28578452 5.43106463 11.36882367 11.67786166 -0.96128289 10.26274884 9.07629400 4.92456550 5.72524763 11.32703644 10.29966663 10.58949386 9.78945409 3.43106128 9.80195954 13.34309843 12.19609405 10.11154964 9.75299255 -0.29508000 0.43294000 0.43294000 -0.12797000 0.00000000 -0.15452000 0.00249690 0.00208050 -0.30215000 0.20015000 0.20015000 0.20015000 0.02174400 -0.29768000 -0.15656000 -0.15656000 -0.15656000 0.00277450 0.00277450 -0.00332430 -0.00470790 0.00833510 0.00569190 0.00569190 0.00569190 -0.00041585 -0.00041585 -0.00041585 0.71980000 -0.28632000 -0.29508000 -0.00138580 -0.12797000 -0.15452000 -0.00678130 0.00249690 0.00249690 0.00208050 0.00208050 -0.29284000 0.00027728 0.22360000 -0.30298000 0.00416320 0.00416320 0.00416320 0.00416320 -0.29615000 -0.29296000 -0.15656000 -0.15656000 -0.15656000 -0.30463000 0.00277450 0.00277450 0.00277450 -0.00332430 0.00708260 0.00833510 -0.29213000 0.00569190 0.00569190 -0.00470790 -0.00041585 -0.00041585 -0.00387790 0.00597000 -0.28940000 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.288 -0.139 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.288 -0.139 10.0401553 12.9287263 8.2699682 10.6090772 5.3304257 10.9213901 4.1680322 0.6236796 9.4775389 9.1088681 NA 8.7454330 4.0831453 9.6915921 9.7269974 3.8967272 9.9290114 9.3538967 8.7529927 9.6996344 8.9734701 8.0045312 11.0889359 3.2086733 8.0387473 9.8716372 4.1680322 -0.9612829 10.8601225 4.8461021 12.6077720 11.6131041 8.0885959 9.9190959 7.9121912 9.2457614 5.2482008 2.3606733 1.0387171 1.3607014 8.8151802 9.1960941 9.5012494 6.0940291 8.4672746 6.1782983 10.3061190 6.2771516 9.4470768 1.8461122 11.4470769 3.8967272 4.9929451 9.8772972 6.4533908 6.5465411 9.8420710 9.0694143 8.1628686 NA 13.7030277 -0.9612829 10.3791536 NA 7.8810974 5.1472701 7.7461065 8.2236224 13.200850 5.623709 8.142035 12.920243 10.159873 10.481691 11.808172 12.438693 9.211175 10.991488 12.984374 12.565246 9.214920 8.443888 1.360701 7.638660 11.693383 11.4417592 6.9456381 8.5971680 9.2359637 9.2211414 10.3636927 8.2457614 7.4050691 12.1562279 6.0831410 4.6534556 7.3379554 7.9017871 11.7514890 10.6589669 9.2099239 8.2723666 12.2019250 7.5063528 11.5592627 10.1865880 10.7000799 10.0217407 11.3087504 10.8617162 10.9098823 8.8151802 -0.9612829 9.3091359 7.8461021 10.3119599 6.2285724 11.0113680 10.3385275 7.6789923 13.8005030 9.5435661 10.0443717 12.5309759 10.9091118 10.3142897 2.0387522 TCGA-AR-A2LQ 59 0 NA 1233 breast stage iib t3 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 10.5170555 10.3150991 11.3661272 9.7657346 7.9490417 8.9572158 10.4980388 9.6925503 10.9643302 11.2029967 10.8783451 10.3879597 2.6050913 13.3405133 4.1900538 10.8350155 6.7311968 9.1055463 10.4384641 11.9060559 2.8115327 11.3816470 7.5045608 9.1195131 10.0795734 6.8588439 NA 9.0287691 9.2027103 6.1525749 8.6941813 8.2731541 0.9046575 6.5841282 10.4360292 10.6929582 9.5054898 11.0826900 10.1807721 12.0630996 11.5525558 8.8100346 15.3611626 8.5330567 9.9827985 11.1122722 11.5082740 5.4124428 3.9490399 9.8797791 12.9858815 NA 11.8377851 6.5412717 5.7501375 5.9046479 10.4664130 11.4469541 10.0248856 12.6675488 12.6230736 8.2599988 11.0767626 10.6514853 11.1787346 11.5068826 5.4592382 12.0558228 10.3980028 3.0745739 10.3439592 9.1796081 3.6084071 6.3392764 10.2175306 9.9088681 10.1364689 9.7469981 4.4896072 8.9854651 13.8423434 12.8218333 9.6958106 9.8182851 0.14102000 0.14102000 0.14102000 0.03340800 0.03340800 0.00097064 -0.00263220 0.00249690 0.00050579 -0.00263220 -0.00263220 -0.00263220 0.00000000 0.00000000 0.00097064 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.00097017 0.00235810 -0.00207840 -0.03026700 -0.03026700 -0.03026700 0.11638000 0.11638000 0.11638000 -0.00041585 -0.03578700 0.14102000 -0.00995650 0.03340800 0.00097064 0.00097064 -0.00263220 -0.00263220 0.00249690 0.00050579 0.00050579 -0.02313500 0.00166420 0.00277450 -0.00942060 -0.00470790 -0.00470790 -0.00470790 0.00000000 0.00000000 0.00097064 0.00097064 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.01560400 -0.00097017 0.00235810 -0.00207840 -0.15029000 -0.03026700 -0.03026700 0.00291330 0.11638000 0.11638000 -0.00041585 -0.00145780 -0.00386270 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.04803097 14.27369972 7.55569961 10.92944106 2.29284063 10.51197803 1.90465750 1.71202343 8.41045941 9.39349214 -1.09541957 9.75187741 4.73753535 9.82500057 9.36612722 1.22657018 10.99707452 9.70958531 11.84917675 9.67861105 9.97956524 7.78116494 11.85137126 3.85884635 8.55569922 10.86718227 4.73753535 NA 10.60161528 4.48960716 12.77105732 12.16777018 9.85301490 10.35946110 8.23780317 9.32881403 5.05439268 -1.09541957 -0.09541957 1.71202343 8.74227575 9.18541836 9.79262991 7.82052683 8.64125266 7.06451860 9.74069807 7.06955503 9.12744267 NA 12.62820200 4.29696391 6.18077246 9.30912934 5.15674447 7.27533490 9.68354611 9.49710475 9.34551680 9.07206586 13.55210614 1.71202343 10.37428953 NA 8.32038945 7.07957332 7.91027215 9.21412408 11.769414 5.858844 8.343439 13.340513 10.171434 10.757957 11.906056 11.077388 8.885444 10.866459 13.772071 11.536507 9.879779 8.630866 -1.095420 7.064519 11.966188 11.6332060 6.5981344 9.0274756 8.7641826 7.6728319 10.1170346 6.5556996 6.7248262 10.8783451 7.1854186 2.9046382 6.4745026 5.7891241 13.4734351 10.6193225 8.8500915 8.4877303 11.6081188 6.6528407 10.6948129 9.5054898 10.0505799 9.6317173 11.0556643 10.6223241 10.6163147 9.1819352 0.9046575 9.6487162 8.9449375 11.8377851 9.8456953 10.6150237 10.4664130 7.5230334 14.0957443 9.9060558 10.7204313 12.9108861 11.0842458 10.0720659 3.1525728 TCGA-AR-A2LR 49 0 NA 1742 breast stage i t1 n0 m0 female 2010 NA no metaplastic carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 1.352509e-06 4.508365e-07 9.6956826 9.8425240 12.1079723 9.8147938 8.7633342 7.1174613 8.7552518 10.7729736 10.2001690 11.4149712 10.8531656 10.8783153 0.5425057 12.0750711 3.2795159 9.9951372 6.8524084 9.3380513 10.0984201 5.5575020 NA 6.9743985 9.2453026 9.0087992 10.4180462 7.5236443 -1.0424568 11.7633342 11.5633013 5.4653836 7.2149777 9.2126189 0.5425057 4.7904801 9.8069953 10.8716017 9.2567984 8.7633342 9.4333238 11.1758508 2.1275012 8.6545580 14.6706277 11.2480700 11.3415456 11.7366940 11.0064177 9.4180461 3.1275177 9.0608780 10.6131210 NA 9.6122262 5.6300152 5.4967499 5.0019823 8.9896360 12.6152437 9.7920613 12.2112901 12.7359755 6.7967937 10.2653604 10.2868316 11.2208595 11.3074244 4.1670448 11.7657501 10.0026674 3.9575896 9.7024241 9.9434322 7.1995261 6.0661150 8.6423388 10.7315537 10.3429135 9.2220329 7.0236790 8.5942149 12.4624093 11.0313971 10.0984201 11.6357503 3.6569000 3.1572000 0.5862000 0.5813000 0.5468300 0.5915200 1.1753000 1.1488000 0.5526600 -0.7044200 3.6569000 3.6569000 1.0821000 -0.6289300 0.5388900 0.7489900 0.7489900 0.5517700 3.6569000 1.2270000 -0.0577890 0.5208300 0.5086300 -0.0754780 0.5046300 0.4241900 1.4428000 1.3355000 0.6005200 -0.0357210 0.5822000 -0.0452280 -0.0165540 -0.0346310 -0.0184900 -0.7141700 -0.0984180 0.6238800 0.5526600 0.0077783 -0.0471240 0.5886500 -0.7260400 -0.0398010 -0.0344950 -0.6713100 -0.0293110 -0.6289300 -0.6395300 0.5388900 0.7489900 -0.0149160 -0.0149160 1.6407000 -0.0351760 -0.0546900 -0.0657160 -0.0452280 -0.6846900 -0.0418380 -0.0273980 -0.0754780 -0.6985800 -0.7552100 0.4321000 -0.0135400 0.5397700 0.5757600 -0.142 -0.608 0.496 0.000 0.552 0.000 0.518 0.000 -0.685 -0.615 0.000 0.000 0.000 0.000 -0.665 0.470 0.470 0.589 0.589 0.000 0.601 0.616 0.576 0.000 0.000 0.000 0.000 0.000 0.000 1.175 0.000 1.170 1.170 0.572 0.572 2.960 3.657 0.000 0.000 0.713 -0.163 -0.142 -0.608 0.496 0.000 0.552 0.000 0.518 0.000 -0.685 -0.615 0.000 0.000 0.000 0.000 -0.665 0.470 0.470 0.589 0.589 0.000 0.601 0.616 0.576 0.000 0.000 0.000 0.000 0.000 0.000 1.175 0.000 1.170 1.170 0.572 0.572 2.960 3.657 0.000 0.000 0.713 -0.163 8.9103315 13.5014075 6.1073385 11.2409681 4.0019823 12.7632334 2.4170288 3.4170153 9.2716071 10.2067038 6.3754426 10.1103125 5.6718368 10.1633835 9.7099709 4.7904801 9.4077706 11.1855070 8.3499079 8.5723000 8.9393859 8.7257746 11.8710407 3.7649406 8.6649493 9.6175861 5.5869478 -1.0424568 10.2918636 6.2885081 12.9297624 11.9994205 8.7422252 9.3007760 9.4723044 10.7145636 7.2055176 6.6300152 -1.0424568 3.9117874 8.9015702 9.2693385 5.8155703 7.2149777 8.0352604 5.5121795 10.1584889 5.7257739 10.9670690 -0.0424568 12.1671960 2.9575989 6.2613710 9.4200926 6.2186514 3.6014469 9.5160110 8.4811524 5.2429911 3.8155754 13.5254870 1.5425552 10.6005445 1.5425552 9.3680417 6.6300152 8.4850673 8.4190699 11.731438 9.310737 8.519833 12.075071 10.398460 10.523644 5.557502 11.936301 9.450445 11.290186 13.784288 12.049026 9.060878 8.249912 6.306319 7.834107 10.194800 11.523882 4.167045 8.001985 9.936301 9.287387 10.469728 5.815570 8.055622 10.853166 9.430281 8.195995 9.664086 8.740785 12.468107 9.754441 8.299421 9.541613 9.886109 6.745493 11.010056 9.256798 10.229637 10.306318 10.668397 11.603924 10.590131 9.295212 2.764941 9.080573 4.934870 9.612226 8.838704 11.027426 8.989636 8.408801 14.738899 10.198978 10.289627 12.588312 10.495779 9.619368 2.279531 TCGA-AR-A5QM 62 0 NA 2231 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 2 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 8.9501071 9.5467093 11.3599409 8.5346363 8.3716225 9.3570056 10.4430273 9.6301253 10.7657857 10.0229058 11.1074243 10.4645502 2.1543888 12.6612945 2.5329154 10.7749783 7.4763201 8.0564654 10.8614059 12.5535630 0.8324445 13.6599554 5.5739319 9.3767520 10.4613649 7.1767596 0.8324445 12.2226328 10.1811920 2.2918982 8.1408027 6.2503155 NA 5.6526414 10.0774222 10.1527002 9.3754956 11.0916186 9.6621866 11.1825743 4.1178696 11.0309089 14.6328077 8.1391410 10.1074242 10.1498764 10.2466205 4.8324647 5.0023875 8.4023193 12.3802019 -0.1674745 10.3461915 5.0222879 6.2754075 5.1543928 9.5224619 11.6734384 10.6736350 12.3751330 12.3304404 7.9514048 9.8863896 9.7942536 10.9162755 10.6313406 4.2247812 11.0191971 10.9212521 -1.1674745 10.2188653 8.6023017 3.4186217 5.2754057 9.7749784 9.1167097 9.8104592 8.8296435 4.5873530 9.2439749 13.7048020 12.4400253 9.9132814 9.6997427 0.0000000 0.8065500 0.8065500 -0.0041546 -0.0041546 0.0036076 0.8516600 -0.0126770 -0.0013858 -0.0096806 -0.0096806 -0.0096806 -0.0284910 -0.0143660 -0.0096015 -0.0096015 -0.0096015 0.3918100 0.3918100 -0.4035100 0.6780800 -0.0356380 0.7817600 -0.0529360 -0.0529360 0.3180300 0.3180300 0.3180300 0.3785800 -0.0575000 0.0000000 0.0127950 -0.0041546 0.0036076 0.0036076 0.8331400 0.8331400 -0.0126770 -0.0126770 -0.0013858 0.4790700 0.4790700 -0.0096806 -0.0077482 -0.0077482 0.8042200 0.8042200 -0.0143660 -0.0198630 -0.0327230 -0.0096015 -0.0096015 -0.0096015 0.3918100 0.3918100 0.3918100 -0.4035100 0.6780800 -0.0264410 -0.0548250 -0.4759600 -0.0529360 -0.4093700 0.3180300 0.3180300 0.3785800 0.7558600 -0.0526660 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 0.147 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 0.147 8.8589874 13.6300747 5.5189631 10.6669349 3.4174205 10.5565513 2.5329154 -0.1674745 9.3501332 7.9278609 NA 7.8408925 4.7393567 9.3422389 9.7143426 5.3560241 9.5730878 8.9847485 9.6138235 10.3989936 9.7204307 8.0636852 11.4232848 2.2918982 9.8261099 10.0492097 6.5603848 2.5329154 10.6530417 3.4174205 12.7540259 12.1702251 8.5467093 9.5145805 9.4708998 9.7105148 3.2247812 1.1543888 -0.1674745 7.4508492 9.0910299 9.7333306 9.7483432 5.7749794 7.6975473 7.9039264 9.5137023 4.6904450 9.2333433 -1.1674745 11.8471818 2.5329154 4.3870523 9.8871767 6.9825670 6.7212072 10.3721074 8.5276920 9.1600164 -1.1674745 13.5276377 0.8324445 10.5031201 NA 6.3638456 6.3638456 7.4727087 8.2795470 12.650347 5.613823 8.214007 12.661295 9.571401 10.395660 12.553563 11.808491 8.953997 10.248206 13.593080 10.881291 8.402319 8.959168 2.002378 6.843691 11.417191 11.774245 6.792466 9.192213 9.110913 7.946206 11.310139 7.185611 9.288818 11.107424 7.271256 2.154389 5.940989 8.671809 10.280580 10.673242 8.323495 8.665354 11.851881 7.324316 11.534985 9.375496 11.439563 10.002389 10.877541 10.759501 10.874123 8.520714 -1.167475 9.759879 7.795360 10.346191 6.696650 11.196598 9.522462 7.550140 13.637351 10.273852 10.496467 12.656826 10.802929 9.731821 2.154389 TCGA-AR-A5QN 68 0 NA 1013 breast stage iiic t2 n3 m0 female 2012 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 2 2 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 9.6901958 9.4108812 11.0990701 9.1929763 8.4938426 9.5456389 10.6688775 9.6981098 10.5788788 9.9887638 9.5362517 10.0920798 0.2771516 13.1468835 2.9775364 9.8340818 6.2827215 7.8991484 9.0755687 12.5377959 5.0050182 13.0220883 2.9209602 9.1880243 10.0020369 6.3592453 -1.7230865 9.7017512 8.3724938 3.2312942 8.0584567 7.6864879 -0.1379653 4.3431875 10.0143443 10.0609137 9.8904259 11.3976588 9.8109133 10.8613547 2.0844385 11.3903507 14.2321337 8.3280340 9.9362008 10.5800214 10.8264002 4.5808751 5.8006592 9.1060266 10.5306489 NA 10.9470891 6.8582969 5.5250259 4.0050137 10.3112080 12.0166666 10.2593775 12.0791083 12.6603961 8.5740129 10.6589102 10.5086601 10.6901958 10.3757870 4.8620595 11.3890476 10.7684489 0.5990321 10.2536610 8.8963999 3.0865120 6.2600897 9.7452118 10.2966876 10.3404919 9.1749424 2.9209602 9.7684490 12.2253728 12.0666305 9.3999249 9.0723248 -0.4629000 1.0283000 1.0283000 0.0108420 -0.0155850 -0.4767000 -0.0020784 0.0015255 0.0015255 3.6569000 -0.0127130 0.6295200 0.0179630 0.0185720 -0.0053992 -0.0053992 -0.0053992 0.0055529 0.0055529 -0.0047148 -0.0216480 0.0270760 0.0341130 0.0341130 0.0341130 0.0250100 0.0296060 0.0296060 0.0486880 -0.4239600 -0.4629000 -0.0058140 0.0108420 -0.4767000 -0.0034627 -0.0020784 -0.0020784 0.0015255 0.0015255 0.0015255 0.0850760 0.0834870 -0.6085400 0.0000000 0.0000000 0.0000000 0.0428740 0.0185720 -0.4619500 -0.0053992 -0.0053992 -0.0053992 -0.0053992 0.0055529 0.0055529 0.0055529 -0.0024938 -0.0216480 0.0270760 -0.5786100 0.0532370 0.0341130 0.0134920 0.0250100 0.0296060 0.0486880 -0.0022168 0.6836600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 0.000 8.4926299 13.0583029 7.0812278 10.2089424 3.6959604 11.1018567 4.2994645 0.2771516 9.0682597 9.2063553 NA 9.0828407 7.4470220 9.9064535 9.7528304 0.8620347 9.2756873 9.7694508 11.0547632 10.2876250 9.6157442 7.2883244 11.2457636 2.6694123 9.9464249 9.9294937 4.3645584 NA 10.4865503 3.7689465 12.2183279 11.9999044 8.1366318 10.3688628 10.8821133 9.4089538 4.4865471 0.8620347 -1.7230865 2.9775364 8.8954823 9.5711432 10.4121648 6.1412836 9.4049880 7.8026178 10.7259875 5.5532222 9.7272771 -1.7230865 11.1721041 3.4470237 6.4570065 9.2366933 6.3651431 3.5250290 10.3482240 8.1288460 5.6864865 0.2771516 13.1547165 1.2770921 10.3888846 NA 8.6779765 4.8469546 8.1020555 9.8945644 13.4934941 5.6434204 7.6629596 13.1468835 10.1443755 11.0183531 12.5377959 11.5867153 8.9504060 10.3448673 13.3097023 11.2714503 9.1060266 7.7138085 0.2771516 7.6564749 11.3221739 11.535368 6.271450 8.396038 9.033653 8.794766 10.396599 7.119447 8.824955 9.536252 8.307764 1.446997 7.113147 7.580467 10.284124 10.616112 8.026262 9.371834 11.152078 5.616946 11.143035 9.890426 10.550601 9.888583 10.588845 9.756372 10.534485 8.557868 NA 9.968980 5.634648 10.947089 6.153613 11.475953 10.311208 7.103646 12.885814 9.929942 10.475542 13.260224 10.709378 9.706504 1.277092 TCGA-AR-A5QP 54 0 NA 1185 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 9.8903825 9.3914840 10.7620230 8.2322852 8.7190855 9.0236133 10.3680391 9.8095328 10.5461117 10.8964647 11.5563278 10.7118608 3.7689994 12.7236254 2.1409749 9.9547513 8.3108949 8.6429881 9.7775948 12.5569039 2.8514592 13.2481278 6.2051012 9.2766374 10.7028655 4.8108235 NA 11.3624958 8.5503612 1.4888749 8.3592580 7.2888688 0.2665167 4.5641830 9.9553342 10.1843703 9.1942789 10.7173686 9.8595809 11.0197178 6.6588184 11.2601471 14.3431218 7.2533672 10.2163278 10.5676161 10.7108258 5.5763558 5.3253936 8.7163376 11.4043461 -1.3183259 10.6048660 5.6357341 5.2665017 5.4230066 9.9881699 11.8247623 11.2342077 11.9293177 12.6180845 8.7782536 10.7101353 10.6259102 11.1861093 10.0866800 4.1733913 11.5869255 11.9055402 NA 10.3280973 9.2456879 3.1370280 4.2361252 10.2613258 9.8922099 9.9853193 9.4069048 3.4888877 9.3289969 13.3802432 12.9310965 9.6342798 9.9778812 -0.0087876 0.4521500 0.7900200 -0.0271970 0.3509900 -0.0292350 0.1436200 -0.0194690 -0.0194690 0.3902300 0.3902300 0.3902300 -0.0010435 -0.0010435 -0.0058871 -0.0058871 -0.0058871 0.0310800 -0.0062911 -0.0013206 0.0014521 0.0145350 0.0257370 0.0208100 0.0208100 0.0346030 0.0346030 0.0346030 0.0152340 -0.3818500 -0.0087876 -0.0069926 -0.3931400 -0.0149890 -0.4117400 0.1436200 0.1436200 -0.0194690 -0.0194690 -0.0065781 0.3765700 0.3717700 0.3902300 0.0379900 0.0379900 0.0379900 0.1330400 -0.0010435 -0.0010435 -0.0058871 -0.0058871 -0.0058871 -0.0058871 -0.0062911 -0.0062911 -0.0062911 -0.0143010 0.0014521 0.0145350 -0.0056769 -0.3880100 0.0208100 -0.0057489 0.0346030 0.0346030 0.0152340 0.0070090 -0.3891200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 0.000 8.8539660 13.9760157 7.9876000 10.2332469 2.4428108 10.3312438 3.0034583 1.0034583 9.4111593 9.7913692 -1.3183259 8.1833758 4.4888941 10.1858610 9.5679973 3.3819755 9.2060803 9.0619997 10.8973748 10.4000714 9.6313433 6.6645326 10.3996432 1.8514792 10.3136250 9.6011468 4.5395187 NA 10.0824180 3.6357312 13.1382780 11.8282663 7.9055404 10.3325902 7.8688904 9.5778710 3.7259374 -1.3183259 NA 6.9007074 9.6878647 9.7156497 10.5293789 6.3325898 9.3106400 6.9294655 10.8159648 5.0390901 9.5356276 1.0034583 11.0821512 1.6815392 4.1733913 10.0537507 4.9567304 6.0738566 9.3172566 7.4791998 9.1151240 -1.3183259 13.9227769 0.6814942 10.7259327 -0.3185058 8.1813844 4.7900630 7.8004793 9.1109452 12.978112 6.402637 8.594428 12.723625 10.346559 11.043208 12.556904 11.398358 9.032433 10.251394 13.283831 11.514824 8.716338 7.439762 -1.318326 7.606351 10.760357 11.060375 5.736821 9.031373 9.035788 8.025834 10.145094 7.047861 6.375026 11.556328 7.416248 4.266502 6.846446 7.707647 10.887637 10.133265 10.450897 9.173392 9.843300 7.504906 11.737063 9.194279 10.579384 9.683650 11.244496 9.831286 10.353964 8.082418 -1.318326 9.687240 7.439762 10.604866 6.934204 10.777595 9.988170 7.371536 14.383468 9.703906 10.741221 12.637552 11.233727 9.853966 1.003458 TCGA-AR-A5QQ 68 1 322 NA breast stage iiia t3 n1 m0 female 2011 NA yes other specify 1 white not hispanic or latino NA NA 2 4 NA NA 2 5 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 8.7421969 8.4500845 10.5269000 7.4294444 9.0309427 9.4602947 8.6417046 10.3656922 11.2952893 11.9643502 10.1835621 10.0425415 0.9906645 10.9065322 0.5756028 11.2691023 5.4663857 8.4335963 7.9390202 6.4582590 NA 9.2679402 4.1199371 9.8558216 9.3514998 7.2290572 1.3126071 11.3412910 10.7609038 3.5756149 8.3678633 9.9176900 NA 6.2760555 8.9287620 9.4294446 9.0847305 9.4805008 8.6823963 9.4148190 NA 6.5905661 15.3559329 7.1353112 10.1903252 9.4734608 10.1056965 3.0781145 2.1605653 7.7421969 10.0520240 3.4500895 10.2320402 5.0350476 6.7455399 4.6630770 9.8869852 11.5093060 10.1108907 11.3015496 11.9666799 6.3743579 10.0472905 9.3968578 10.0164845 9.9878323 3.3829715 11.0428812 9.5737356 0.5756028 10.6718912 9.1327598 2.1000021 5.8975430 8.5680815 9.5652464 9.8945347 8.4784930 1.3126071 7.4541775 13.6414802 12.4540495 9.1225097 9.3249260 0.0174040 0.0174040 0.0174040 0.0073609 0.0073609 -0.1304400 0.0267950 0.0000000 0.0000000 -0.1552200 0.1383500 0.1383500 -0.2397900 -0.2397900 0.0604500 0.0604500 0.0604500 -0.0024938 -0.0024938 -0.1348400 -0.0376260 0.0162860 -0.0098185 -0.0098185 -0.0098185 -0.1511900 -0.1511900 -0.1511900 0.0329860 0.0174040 0.0174040 -0.0947240 0.0073609 -0.1304400 -0.1304400 0.0267950 0.0207630 0.0000000 0.0000000 -0.1696400 0.0182470 0.0342540 -0.1552200 0.0012481 0.0012481 0.0012481 0.0012481 -0.2397900 -0.2022400 0.0604500 0.0604500 0.0604500 0.0248290 -0.0024938 -0.0024938 -0.0024938 -0.1348400 -0.0376260 0.0162860 -0.0793430 -0.2702600 -0.0098185 -0.2592600 -0.1511900 -0.1511900 0.0329860 -0.0087146 -0.0931390 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 0.000 9.087367896 15.013367399 3.078114506 10.032996187 2.651729096 10.051348716 5.861017407 2.798009028 9.853290215 9.351499802 -0.009408127 7.632054413 1.798009028 10.951378851 9.490498732 2.798009028 7.817201131 8.900545939 10.062115234 9.905785308 9.200142861 5.758836147 11.750124934 0.990664477 5.798009028 10.262115875 2.798009028 NA 10.988537925 1.312607093 13.174288216 13.061360796 6.921389913 9.421105455 10.538993105 9.903542215 2.160565278 3.450089496 NA NA 8.977916973 10.563353024 6.620010097 5.160577378 9.052806850 8.508322079 9.829856693 5.119937123 9.933167325 -0.009408127 9.045935176 4.634506147 0.990664477 9.489033280 8.302469400 7.804433729 10.142937708 9.300129217 10.396326169 11.352322500 13.984166214 -0.009408127 11.153988004 NA 9.825123838 2.160565278 7.956437146 8.522034164 12.331076 8.716871 7.933167 10.906532 9.654211 10.969363 6.458259 9.836143 9.150524 9.946303 13.722926 11.508568 7.742197 7.839276 4.745539 7.645289 9.608120 10.9188010 0.9906645 9.7108972 8.9184307 9.6132080 8.9964037 8.5083221 6.3569748 10.1835621 5.5605071 NA 9.7736511 9.4940811 12.3590229 10.1536735 8.0971636 12.0809307 6.9154659 8.2597795 10.2089921 9.0847305 10.5770235 10.3410396 9.5970581 10.7559389 10.1823289 8.3700313 NA 9.9927364 9.0741321 10.2320402 5.2194706 11.0309425 9.8869852 6.8610174 14.3185212 11.0216647 11.1121863 12.2552420 11.2049719 8.7151668 2.7980090 TCGA-B6-A0I1 73 1 2361 NA breast stage iia t2 n0 m0 female 1998 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 10.43202674 8.92749917 9.64828064 6.48473591 8.89553499 9.34684124 8.45181074 10.29134605 11.90432291 13.13633107 8.94842213 9.93704714 5.52073967 12.76263953 1.54092000 11.07403158 7.30763071 10.16865470 8.24443710 3.65639340 -1.62905459 8.63777976 9.01665148 10.46989381 11.24116519 6.11246036 -0.04409209 7.93894911 11.90188716 2.07141946 10.39301413 5.42627482 NA 3.76330533 9.05486502 8.96811466 9.39613272 9.34397293 8.89749245 11.20684618 4.17834815 1.83041760 14.58883730 8.76026952 10.54435797 10.38954111 10.90845425 4.43708122 -0.62905459 7.72854503 8.95030918 -1.62905459 9.09635938 1.95594510 6.50027624 4.65639340 6.79305831 11.98800141 8.96904570 11.26883864 11.76666116 8.25363621 10.86509869 10.16622925 10.32736929 9.53527168 2.89454617 11.23033381 11.89859236 -0.04409209 11.00580424 9.81549041 3.07198571 1.95594510 11.54778965 8.61773376 10.59951130 9.89895881 -1.62905459 8.12754971 11.91414583 12.77467097 9.84622000 9.97924797 2.7657000 3.1053000 1.3795000 0.0112610 0.0108420 0.0190830 1.1427000 -0.0139530 0.0147490 -0.7309100 2.0452000 3.6569000 -0.0067813 1.3253000 0.0041632 -0.0591350 -0.0100940 -0.0412950 -0.0070576 -0.7282200 -0.6984800 -0.0252090 -0.0544200 0.5743400 -0.0182160 -0.0237030 0.5478800 -0.7350300 0.5397700 -0.7370500 0.0137720 -0.3556700 0.0195270 -0.7360800 -0.3541900 -0.7237600 0.0269350 -0.7629500 0.0147490 0.0071236 0.5477100 -0.0115720 -1.2929000 -0.0128510 -0.0128510 -0.0128510 -0.0128510 -0.7093500 -0.0147780 -0.0075340 0.4902700 -0.0100940 -0.0100940 0.0118180 -0.0070576 -0.0070576 -0.6934200 -0.7172000 -0.7203100 -0.0559030 -0.0544200 -0.0293110 -0.0026322 -0.7194200 -0.7148800 0.5585000 1.0316000 0.0172640 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 0.000 5.19117176 12.14114083 -0.04409209 9.04253436 2.83041760 10.78699896 0.37094541 2.69291813 8.88373352 5.79725687 7.30173030 8.30615832 7.60461253 11.45762702 9.42830803 4.95595440 3.17834815 10.49317406 6.66101131 10.56759526 8.63994443 6.39889928 10.42763089 NA 9.26201730 9.74494582 2.07141946 -1.62905459 10.17875061 1.83041760 13.37942179 12.88693934 4.92558174 9.87034083 9.52960293 12.22283978 4.59981170 1.37100119 -0.62905459 NA 10.92318195 10.34001987 5.86284561 0.37094541 10.33539181 9.07576151 10.57525862 5.96345100 9.69348469 7.10908574 13.39500735 -0.62905459 3.79726205 9.86782698 9.16072233 4.17834815 8.43438845 5.04341888 6.86684865 12.35469937 14.42684751 2.45846075 11.37486240 0.95598228 9.09465412 3.79726205 9.31936029 7.66790915 9.054944 9.542170 8.451811 12.762640 8.798306 12.090810 3.656393 9.552767 8.930370 9.654660 14.485081 11.980634 7.728545 8.919815 4.500273 7.983862 10.968347 10.5518347 5.0852377 9.0548650 8.4964068 8.6985460 10.0407463 4.6747713 6.1258804 8.9484221 10.4604436 1.3710012 9.1767371 9.3028091 10.2816359 10.5121423 7.4873368 10.3557677 2.6189199 5.8139376 14.4356012 9.3961327 10.0920923 11.0227176 11.3253712 10.5886480 10.8490044 7.2133434 3.5002794 9.2917108 5.7108422 9.0963594 2.8304176 11.5103847 6.7930583 7.8777369 14.6673000 9.9188516 10.3992446 14.4056632 10.1580795 9.2801363 0.3709454 TCGA-B6-A0I2 45 0 NA 4361 breast stage ia t1c n0 (i-) m0 female 1995 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 2 4 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.121176e-07 9.113161 8.306393 10.470827 7.487691 9.450979 9.600097 8.726047 10.263636 12.187293 12.223251 11.527243 10.080486 1.172999 12.129515 1.658417 8.726047 6.350911 8.831206 10.507044 6.530545 -1.148801 9.446323 8.790645 10.267863 10.471286 5.537566 NA 14.094333 10.830848 1.172999 7.159405 8.023493 NA 6.862293 8.221753 10.254611 8.509277 9.072653 8.855286 10.745126 5.990617 6.900914 14.120046 7.976402 8.691844 9.625853 9.657616 1.658417 NA 8.206417 10.576432 -1.148801 11.462782 5.040892 8.370702 6.884489 8.241235 12.041354 10.874474 11.298666 11.978093 5.390224 11.030042 10.389740 10.608873 10.166782 3.310500 11.872566 3.980345 NA 10.370702 9.245529 4.279679 4.805261 8.718345 9.291935 11.035011 9.230444 3.020982 9.115509 12.694791 11.843473 10.138201 9.427550 1.0151000 1.0151000 1.2161000 -0.0173910 0.8988900 0.0000000 0.8390300 0.8575900 -0.0048461 0.4566600 0.4566600 1.4531000 -0.0169790 -0.0169790 1.5998000 1.4548000 2.8122000 2.2059000 -0.0138720 -0.0593620 -0.0161540 -0.0245240 -0.0261670 -0.0261670 -0.0245240 0.4381700 0.4246900 0.8469200 0.8486900 -0.0286280 1.0151000 -0.0289400 -0.0173910 -0.0217840 -0.0084632 -0.0145030 -0.0145030 0.8575900 -0.0048461 -0.0250040 1.7761000 0.8764700 -0.5061900 1.6493000 1.6493000 0.4852700 0.4219300 -0.0169790 -0.0169790 -0.2013700 0.7209300 -0.0315520 -0.0315520 2.2791000 -0.0175290 -0.0175290 -0.0107840 -0.0161540 -0.0245240 -0.0351840 -0.0261670 -0.0245240 0.3544700 -0.5043200 -0.0372180 0.4883700 0.8964800 0.7079500 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.000 0.000 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 0.343 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.000 0.000 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 0.343 9.3308461 11.9077036 NA 7.9252073 3.5515037 10.9477811 1.8510794 -0.1489606 9.9131120 7.0507378 NA 6.2940086 3.9803453 9.7669453 9.5003221 2.3104855 6.7699291 8.9252073 7.6159378 10.5097236 8.8906431 6.0702347 11.0439751 1.8510794 7.8566907 11.6722419 0.4360552 NA 10.5331826 7.7519330 13.5838693 12.1559876 6.3588604 8.9158086 10.0804855 10.9087193 5.0989922 3.2433797 -1.1488007 0.8510394 9.1763714 10.6684494 8.1271901 -1.1488007 9.2674202 6.8510656 9.9471222 3.8510694 9.8269139 -0.1489606 11.6252352 1.8510794 2.7579620 10.3874977 7.6705104 7.7758782 8.7413301 9.0653849 10.4175957 4.0605230 14.2983752 -1.1488007 10.7695565 NA 8.3145905 3.3746222 8.3186716 6.1548465 14.666760 8.279426 8.342919 12.129515 10.162247 10.973570 6.530545 6.816851 10.665648 11.098896 13.151847 12.052884 8.206417 8.691844 8.672840 6.465775 10.256739 10.971952 -1.148801 9.043359 8.712153 7.956974 10.057042 7.865086 5.537566 11.527243 11.465776 NA 5.420920 9.379803 11.742280 10.576432 7.405655 8.736762 5.949098 7.943823 11.863392 8.509277 10.625853 11.119023 9.984208 9.541064 10.717572 6.889985 NA 9.563662 9.059300 11.462782 2.851059 11.312034 8.241235 7.867874 15.692999 9.862992 10.564452 12.263371 10.395064 8.994449 3.605957 TCGA-B6-A0I5 49 0 NA 8556 breast stage iib t2 n1b m0 female 1988 NA no infiltrating ductal carcinoma 5 white not hispanic or latino 5 2 2 NA NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4.508365e-07 1.387189e-07 9.6721378 8.3630252 10.6052595 5.8072081 8.6592078 8.7351055 9.2374942 8.9065040 10.8170935 12.1695035 10.1703800 9.8295767 6.0940904 13.6135974 3.2508100 9.9081866 7.8286887 8.2104765 9.1320195 12.8083356 -0.8367589 13.8538964 5.3332770 10.8437122 10.2692612 6.4852803 -0.8367589 9.3041825 11.3301435 0.1633699 8.1377673 6.4942700 NA 4.1633538 7.6671783 9.7844889 9.4017574 10.6622019 9.2653284 11.0115845 11.9263576 11.0344879 15.1559813 6.9992142 9.6094022 10.0135396 10.3987687 4.5556689 2.7483109 7.7632655 10.0236639 NA 10.6395927 4.0213376 4.8357776 4.1175454 9.6927832 11.9541085 11.1226303 12.9174051 12.0346805 7.7179416 10.9022894 10.1555830 10.1219054 10.3758491 2.3332806 11.3645578 10.7716076 NA 10.2186352 9.1276936 5.5375228 2.9707064 11.5126340 9.4591217 10.0041307 9.8895709 2.3332806 10.5104204 11.9336037 11.5448957 9.6145639 10.0135396 -0.00055444 1.16650000 1.15960000 0.00041593 -0.01006700 0.00000000 -0.00664320 -0.00484610 -0.00484610 1.08100000 1.08100000 1.08100000 -0.01243800 -0.00871460 -0.00934190 -0.00934190 -0.00934190 -0.00567570 -0.00567570 -0.00346270 0.60359000 0.57398000 -0.00304750 -0.00304750 -0.00304750 0.00527490 0.00527490 0.00527490 0.53837000 -0.00055444 -0.00055444 0.00124810 0.00041593 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00484610 -0.00484610 -0.00484610 0.52906000 0.52906000 1.08100000 -0.00207840 -0.00277070 -0.00277070 -0.00277070 -0.00871460 -0.00332430 0.01377200 -0.00934190 -0.00934190 -0.00934190 -0.00567570 -0.00152430 -0.00152430 -0.00346270 0.60359000 0.58399000 -0.68998000 -0.00304750 -0.00304750 -0.00140540 0.00527490 0.00527490 0.52695000 -0.00180140 0.00583090 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 0.146 8.2692614 12.8159737 6.7632655 9.2063800 3.4989274 10.8993318 3.1633538 0.1633699 9.3873544 7.4394769 0.7482895 7.1348965 2.3332806 10.4400587 9.0657279 2.7483109 7.3181713 9.2132012 10.6400989 12.5069549 9.0180964 5.7483163 10.8188835 0.9789278 8.4762359 9.8463473 8.9739243 NA 10.9958472 2.1633377 14.0617179 12.6180376 6.9315365 9.5241999 6.6552058 10.5922363 1.4852722 1.1633699 2.1633377 11.2881203 9.0732459 11.5324047 9.4017574 3.5556689 8.1220504 7.9048194 10.3715871 5.9962418 9.0505733 NA 8.4739655 NA 4.0213376 10.4471414 8.5314228 3.6227898 8.6471684 7.1520374 7.5769808 4.7179396 15.0514062 0.7482895 10.1555830 NA 8.9048197 5.5383923 8.1491948 8.3206995 12.777925 5.333277 9.213201 13.613597 10.141348 11.291669 12.808336 11.878671 8.692783 9.580857 13.216939 9.476236 7.763265 9.171781 1.163370 6.606296 11.017442 10.878886 5.250814 9.157678 9.011976 7.234816 9.451757 6.271878 8.271877 10.170380 7.748315 2.622790 7.547057 5.806631 10.876310 10.518704 9.140633 10.262043 7.529675 5.163354 11.405387 9.401757 10.963444 10.801336 10.220668 8.523102 10.572213 7.082216 1.970706 9.089248 6.021333 10.639593 6.448756 10.648176 9.692783 7.218960 15.337323 10.402951 10.189876 12.696196 11.397272 9.242838 2.333281 TCGA-B6-A0I6 49 1 991 NA breast stage iia t1c n1 m0 female 1990 NA NA infiltrating ductal carcinoma 6 black or african american not hispanic or latino 4 4 NA NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.358222e-06 6.935946e-07 10.2351651 9.7616927 12.1983568 9.1489407 7.6677169 8.5091705 10.1972266 11.0516163 11.9470802 12.3662719 11.3794108 10.7420639 1.8798234 11.8864907 2.8798234 9.8847366 7.2152039 7.9619630 10.6782858 7.1086332 0.4647728 6.6479980 9.0597230 9.0652470 11.9896446 5.4344014 1.6871503 7.7532582 11.0600339 0.4647728 10.0161644 7.8193929 2.9672793 6.9935566 9.6026215 9.7971860 8.4053347 10.4391910 9.9652865 11.0456631 2.0497353 10.8234277 15.9769202 8.6204885 8.9364516 10.5223170 10.7264797 3.6871727 NA 9.1014011 12.5305292 -1.1202942 10.2764187 6.3555467 5.0696377 5.5663159 8.4889925 12.2302007 9.4787969 11.9485922 13.2301317 6.7746316 11.3799089 11.3742371 10.8307343 12.0673207 5.0497397 11.7414825 10.8727523 1.6871503 10.6770702 10.0528665 3.2017436 4.2017436 8.7639845 11.0494259 10.6811181 9.5182499 3.0497353 9.9532862 12.5364623 12.1036649 10.3920606 10.6517161 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.8741674 14.7535945 5.2548548 9.8281812 2.4046307 12.4762367 NA 5.0295589 9.1407334 9.4170324 -0.1201374 10.0541155 6.5733003 9.8903421 9.5863101 6.7253035 6.1182185 9.9411851 5.7253049 9.2318574 8.6608295 7.7927031 11.4815848 0.4647728 8.9922535 10.2950275 1.4647728 NA 10.1949635 3.0497353 12.5172313 12.5549992 7.1835947 9.3636297 7.9214732 10.1588441 6.2892055 1.8798234 -1.1202942 1.2017593 8.8628075 9.1755830 7.8164519 6.7624565 9.4237158 6.1652165 9.4401468 9.8833318 10.2362660 -1.1202942 13.2511142 2.0497353 6.8798136 8.7970370 6.5254723 4.5802540 8.7409009 7.0745707 5.8105511 3.5802540 13.1087078 -0.1201374 11.5259226 NA 8.0168049 4.6871671 8.0116712 8.0696383 9.670472 9.209610 8.487144 11.886491 10.946240 11.005550 7.108633 11.133661 9.591808 11.896796 12.149379 11.552239 9.101401 8.351489 8.516439 7.566314 11.103816 10.8931366 6.2107317 8.3351411 9.3606042 4.0497353 11.4617701 6.3555467 5.2892037 11.3794108 9.9791618 6.2548529 8.9922535 10.7084067 13.4960182 11.2321333 7.8046267 9.1663717 8.9091013 5.2196642 10.6865126 8.4053347 9.9077199 10.1721356 12.1541921 11.7945728 11.2436750 8.6790954 8.3289625 9.5122004 7.0039350 10.2764187 6.8105511 11.3041771 8.4889925 8.0968021 14.9934341 10.3935416 9.7964399 12.3767925 11.9226703 9.6077344 -0.1201374 TCGA-B6-A0I8 46 1 749 NA breast stage x t1 nx m0 female 1992 NA no infiltrating ductal carcinoma NA white not hispanic or latino 6 3 NA NA 2 4 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 9.01673e-07 10.232687 9.862812 11.971189 10.368587 9.232312 7.736796 9.836896 8.957072 9.331597 14.105655 11.144145 10.678244 1.130536 14.190737 3.846734 9.015784 1.323197 7.825006 9.804463 12.942127 2.410640 13.104016 5.265684 9.151305 11.217418 8.836896 NA 7.522840 9.157639 1.130536 7.640581 6.373017 NA 5.091353 10.493406 11.892549 9.453739 11.070103 10.330196 12.365341 3.277360 10.715217 14.856970 7.348363 9.409305 9.900597 11.429241 3.532616 1.493084 9.910477 10.472280 -1.676688 9.000007 4.472917 3.532616 4.323168 9.703088 11.708626 9.773349 11.542337 12.693175 9.273724 10.732559 10.692463 11.228179 11.020788 5.671896 12.677142 8.876798 3.410626 10.384540 9.415926 3.684942 4.749432 9.831954 9.415265 10.979146 11.175113 1.493084 8.262747 11.443082 10.234186 9.809501 9.465276 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.94705010 13.04906721 6.50307677 9.37845093 NA 11.35469733 -1.67668758 NA 8.60393933 7.08472018 NA 7.53991409 1.32319711 9.68401552 9.44534930 2.02361022 7.78464793 9.64114625 8.14812724 10.82027176 9.22143729 8.30616197 10.19738135 3.07806326 8.15130480 9.41724620 2.71547609 -0.67691821 11.30312945 0.90812117 11.97746884 12.27454423 7.52038532 10.09795547 7.46271984 9.44081146 4.47291662 -0.67691821 -0.09187883 5.26568443 7.74102063 9.64171129 11.39747720 4.64509637 7.95950299 6.72830966 9.69167496 8.31752206 10.45855713 -1.67668758 10.15763949 2.57109428 4.15605678 9.49763232 5.41814271 2.41063960 9.41592553 7.54233699 8.34136849 -0.09187883 13.30923267 -1.67668758 10.46015955 NA 7.66079032 4.15605678 8.36619586 8.29901656 12.749302 3.908131 9.009669 14.190737 9.705793 10.571986 12.942127 10.734944 8.887318 11.044695 12.855220 10.271171 9.910477 8.515461 2.323168 7.817024 13.467030 10.9822724 5.7494324 8.5154613 9.2715356 8.3033081 11.1855675 5.1686581 5.9156261 11.1441451 4.2058147 3.0780633 6.1935332 7.3664691 10.1560584 9.6154901 8.5992929 8.7357384 12.2091507 4.8309651 13.9717103 9.4537390 11.5016777 10.6976646 11.6552050 9.9226164 10.8202718 9.5320124 NA 9.4703862 4.3231683 9.0000070 6.7025467 10.3668793 9.7030882 7.4160045 12.8100035 9.4773537 10.0671613 13.1075988 9.6137633 9.8289800 -0.6769182 TCGA-B6-A0I9 62 1 369 NA breast stage iv t3 nx m1 female 1992 NA yes infiltrating ductal carcinoma NA white not hispanic or latino 6 3 1 NA 1 6 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 1.733986e-06 3.81477e-07 10.36731100 10.17152998 11.80393970 9.69500534 8.87469647 8.97037455 10.15831443 10.55655855 10.46422226 14.37561867 11.16373546 11.35314545 -0.06491748 17.57079264 4.41624525 8.13805724 2.67208584 8.58616875 5.61693988 12.77287647 -1.64972908 13.93467680 3.20814265 9.59773209 11.45048845 3.99400941 -1.64972908 10.64190092 11.25591770 2.05060617 8.06440003 7.11833896 -0.06491748 5.03665718 10.46747309 10.20463350 9.74729441 11.75529612 10.67489773 11.37650517 2.99401847 10.04494787 14.72312170 9.03135797 9.56932323 10.99468692 11.64707085 3.87371478 7.19564485 9.13887308 10.63179494 -1.64972908 10.92356512 5.66303715 5.42696915 4.82588737 11.25384825 11.79788363 9.61107424 11.13703685 12.34768700 8.61107424 10.86560809 10.59923549 10.78712641 10.97220648 5.38357643 11.57731930 11.53053007 1.93512025 10.75582795 9.17590853 3.63667102 3.20814265 11.35735714 9.68330994 10.67995101 9.96899892 1.93512025 8.22820541 11.42077875 9.94494583 9.93417752 9.44555167 0.5356300 1.1962000 1.1962000 3.0762000 -0.0222710 -0.0336170 0.0090932 0.4106900 0.4347000 0.0306540 0.0306540 0.0113230 -0.0038163 0.0068663 -0.4597700 3.6569000 1.6519000 0.3321200 0.0040973 -0.0145800 0.5223100 -0.0162300 -0.0141670 3.6569000 0.5621700 -0.4760200 -0.0404200 -0.0678000 1.0924000 -0.4583400 -0.4461500 -0.4306700 -0.4428100 -0.0702090 -0.0215860 0.0090932 0.0090932 0.4106900 0.4347000 0.4120200 -0.9322000 -0.4549600 -0.4888500 -0.4621200 -0.4377300 -0.9238000 0.7204500 0.0068663 0.0074228 -0.5064500 -0.1696200 -0.4530300 -0.4534600 0.0081187 0.0040973 -0.0085151 0.4406100 -0.9217100 0.8296900 0.0061709 -0.4667000 -0.4498600 -0.0144150 0.6537700 -0.0404200 -0.4565700 0.0046419 -0.0280210 0.000 0.000 -0.437 -0.437 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.398 0.710 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 0.000 0.000 0.000 -0.437 -0.437 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.398 0.710 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 0.000 8.47039247 12.70578103 6.93511671 8.96578428 4.07807180 11.36190606 -0.06491748 0.93508252 8.06611664 7.56447344 NA 7.85533134 0.67210848 10.83623542 9.06868747 0.35015775 7.50243961 9.87322646 12.37918299 11.50275639 9.45649508 7.30725638 10.12946360 0.35015775 8.29559860 9.79723789 2.25704080 NA 11.21259828 4.18304181 11.87310393 11.71715978 6.71647653 10.19916866 7.67658406 9.26229549 3.25704080 2.59807931 0.67210848 1.93512025 8.66417134 10.02787435 10.79335726 2.59807931 8.66639090 6.86585450 9.97996659 6.75954602 10.07892546 -0.64995543 10.88104863 1.93512025 3.25704080 9.22869606 5.78586699 6.60282058 8.34167670 7.96486471 9.03227141 -0.06491748 13.75339973 -0.64995543 11.55396147 NA 7.20190336 3.70770147 8.75529621 9.84950222 14.63236891 6.94634487 8.74461725 17.57079264 9.86979092 11.62845889 12.77287647 11.51223123 10.41658021 11.28973385 13.22345456 8.19877750 9.13887308 9.33029419 -0.06491748 8.63440050 12.15398307 11.37182869 6.46389706 8.19564485 9.57475926 9.07210821 11.24175612 5.55960806 4.59807931 11.16373546 5.73385865 -0.06491748 6.45867893 7.74283690 9.93182604 9.99085150 7.54491113 8.19721178 10.97700438 7.19564485 12.55789044 9.74729441 9.09162156 9.88299757 11.60503562 9.77903822 10.75316668 8.61811162 4.79309994 8.49244047 7.60045338 10.92356512 4.99400941 10.80753549 11.25384825 7.58137611 13.41194772 10.00657953 10.09288515 12.33091901 11.34856877 10.15105460 2.25704080 TCGA-B6-A0IA 51 0 NA 8391 breast stage iia t2 n0 (i-) m0 female 1992 NA no other specify 0 white not hispanic or latino 5 2 5 NA NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 9.9254266 8.4551542 10.3357668 7.3404644 9.1257252 9.0242801 9.1047945 9.7808571 9.2214298 12.4109752 11.4598712 10.0614824 1.6159341 12.2818412 2.7034108 9.3741733 6.4168499 7.7808573 10.7129947 13.0141594 0.9378717 14.1211725 4.6820395 10.7514222 10.5889300 8.1686195 -0.3840188 9.7439446 13.4393672 NA 5.3841362 7.2489456 -1.3842071 1.4233092 7.4038531 10.7316441 11.4551540 11.1113056 7.8057748 9.6187652 4.6820395 10.3357668 14.8958509 4.7742072 8.0916834 10.2116739 10.7992754 2.3163775 -0.3840188 8.5860561 9.0630334 NA 11.5553457 3.9378811 5.0753829 4.8447673 10.0886410 11.8363285 10.5119041 12.9937708 12.7074682 9.4801362 11.2963097 10.0723047 11.0969928 9.8429644 1.6159341 12.9924826 10.4762613 1.7858853 10.4731536 8.3146548 0.6159812 1.6159341 10.4828427 10.1690995 8.8131668 9.4893942 -1.3842071 9.0926964 12.1646517 11.9193029 8.8839073 9.3907373 -0.01215100 1.39690000 1.52720000 0.77314000 0.78257000 0.00169090 -0.00038921 1.58540000 -0.90067000 1.66580000 1.66580000 1.60460000 0.00683110 0.00683110 -0.01057300 -0.01057300 -0.01057300 -0.00329770 -0.01237100 0.00989370 0.00446780 -0.00703110 -0.02175800 -0.02175800 -0.02175800 -0.02463500 -0.02463500 -0.02463500 -0.02006500 -0.01215100 -0.00495790 -0.00703110 0.77928000 -0.00592560 0.03456300 -0.00038921 -0.00038921 -0.92210000 0.14759000 -0.90067000 0.00000000 -0.00419530 -0.89103000 0.00127470 0.00127470 0.00127470 0.00127470 0.00683110 0.00683110 -0.01057300 -0.01057300 0.00502360 0.00502360 -0.01237100 -0.01237100 -0.01172200 0.00989370 0.00446780 -0.00703110 -0.88068000 -0.02175800 -0.02175800 0.00822260 -0.02463500 -0.02463500 -0.02006500 0.01031200 -0.00979200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.896 -0.896 0.000 0.000 0.003 1.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.896 -0.896 0.000 0.000 0.003 1.605 0.000 0.000 0.000 0.000 5.1858071 11.0689636 2.7858853 7.9888153 -0.3840188 10.2821742 -1.3842071 NA 8.4598713 5.2453055 0.2008810 3.7034108 3.6159459 11.3389711 8.4754850 1.4233092 4.1395104 8.4924673 12.2882650 12.8517401 9.0703421 6.4614402 9.0018127 -0.3840188 8.5137955 9.9468671 4.6820395 NA 10.1222578 2.3163775 13.9085235 12.4092487 4.2598073 9.5896476 6.5584651 9.7720333 1.2009437 2.3163775 NA 7.8756935 9.3849616 11.4938094 11.1688594 NA 8.7636894 8.7335933 10.7208765 6.8874132 9.1492799 NA 12.3130263 -0.3840188 3.0753786 10.4525529 7.3153489 NA 9.2552909 5.3301962 4.3163920 8.1686195 14.6754848 NA 9.9641251 -1.3842071 7.3574174 3.0082717 8.6173584 8.9524568 13.9191505 5.4863154 9.3146548 12.2818412 9.8943996 12.1491582 13.0141594 11.8387451 8.6833845 9.8026834 13.8697977 9.9390050 8.5860561 9.8501689 0.6159812 6.9778935 11.3183393 9.9844566 5.7244757 10.1067910 9.0285200 8.1705390 9.2991553 5.7139817 7.3540422 11.4598712 5.8254040 -0.3840188 9.1512256 5.4457995 7.2269747 9.8780451 8.4801362 10.0285200 11.9695106 1.2009437 9.7043078 11.4551540 9.9828188 10.0295781 9.8897458 8.5496407 10.1057981 7.8850771 NA 8.1753275 -1.3842071 11.5553457 5.4361285 10.0306354 10.0886410 7.1863748 14.8073565 11.1294311 11.2868277 12.2641954 9.7420092 9.1781925 -1.3842071 TCGA-B6-A0IB 64 1 3941 NA breast stage iv t3 n3 m1 female 1992 NA no infiltrating ductal carcinoma 8 white not hispanic or latino 5 1 3 NA 3 5 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 2.774378e-07 9.3528075 8.7036821 11.5682042 8.5578787 8.5872727 9.1994567 10.0305227 9.5329181 9.3831513 13.1475766 10.7714063 10.5951315 1.1778540 12.0373056 2.4579882 9.1608753 8.2269526 7.5848460 10.8255971 12.8636943 3.7628484 13.8412174 6.9741530 10.1086486 11.3861161 8.6708793 1.1778540 7.0708970 12.1699096 -1.6295009 7.8523260 6.1907057 -0.6295009 2.9554802 9.3326999 10.2195409 9.2455083 9.4770898 9.2676159 10.8683786 1.6924718 10.1649426 14.5472454 8.8157797 9.5379450 10.9613477 10.5395123 3.3247242 0.9554616 8.0394121 10.0674943 -1.6295009 9.1762707 6.8980039 1.3704991 5.4579882 8.7692706 11.8656323 10.0416255 11.3756250 12.1714267 9.9038565 11.0920533 10.7340045 11.0215785 10.7120456 4.3012657 11.8626303 11.5611231 -1.6295009 10.7181481 9.0125785 2.9638810 2.1778859 10.9289475 10.0552754 9.6657218 9.5010973 -0.6295009 9.0631424 13.9301130 11.2634490 10.3341454 10.0340849 0.7060700 1.1396000 1.1396000 -0.4711700 0.0265140 -0.4464200 -0.4575800 0.0083344 0.0093098 0.4616100 0.4616100 0.4616100 0.4624600 -0.4508300 0.2834300 0.2834300 0.2834300 -0.0062009 0.0088920 0.5749600 0.7435500 -0.4424300 -0.2896400 -0.2896400 -0.2896400 -0.1663700 -0.1663700 -0.1663700 0.4057700 -0.4459000 -0.4421000 0.0109820 -0.4536100 -0.4464200 -0.4464200 -0.4575800 -0.4504000 -0.0178030 0.0093098 0.0093098 0.4089400 0.0136320 0.4616100 -0.1420700 -0.1420700 -0.1420700 -0.1420700 -0.4508300 0.2869100 0.2834300 0.2834300 -0.6299800 -0.6299800 -0.0062009 0.0088920 0.0088920 -0.9478800 0.3533200 -0.4424300 -0.4546100 -0.2896400 -0.2896400 0.1843400 -0.1663700 -0.1663700 0.4057700 -0.4060600 -0.0040162 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 0.000 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 0.000 7.8279079 11.8652574 2.6184501 9.9722976 2.6938995 11.8643823 -0.0445384 NA 10.0946143 8.2653445 NA 6.8980039 2.2774195 10.4754531 8.9096855 3.7280838 5.7280783 9.4101314 11.2234464 10.7081487 8.7816987 7.1018454 10.2634490 -0.0445384 8.6279147 10.1399515 2.2774195 -0.6295009 10.6611217 0.9554616 11.9362239 11.7256025 6.8503069 9.6308583 7.8360933 9.5360620 6.3817540 -1.6295009 1.3704991 6.7883790 8.9971484 10.2664806 10.0627063 3.4149203 9.1129709 7.3901174 9.9526687 6.3071644 9.4797045 NA 11.4998098 -1.6295009 3.9251164 11.4051573 6.6047222 -1.6295009 9.2128772 6.7280783 7.6160798 1.1778540 13.6372036 0.9554616 10.7379416 NA 4.1778779 7.4842687 8.4998100 9.1746578 13.847778 6.342071 7.915491 12.037306 10.088203 11.339014 12.863694 10.984316 8.204998 10.436280 13.238240 9.143666 8.039412 9.572651 2.070973 7.155161 11.276666 10.796267 7.280420 8.251641 9.505595 8.498263 10.514423 3.618450 6.184308 10.771406 6.125413 6.535434 10.850812 7.175625 8.091626 9.562820 8.133474 9.344224 9.388031 3.228511 11.923177 9.245508 11.089702 10.800457 11.690199 9.706475 10.647524 7.187510 9.576931 8.607844 3.277419 9.176271 5.370527 9.763381 8.769271 7.181099 13.474634 9.696956 9.242432 12.355657 10.598143 9.222276 1.177854 TCGA-B6-A0IC 90 1 1542 NA breast stage x t2 nx mx female 1992 NA no other specify NA white not hispanic or latino 5 5 2 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 10.7551554 10.0606686 12.0853610 10.0716594 8.3282387 8.5385661 11.0679514 8.8019114 10.3054161 13.1622256 11.4663059 10.4041116 -0.4727294 12.9051369 3.4018079 9.5547841 6.9730441 8.1457243 11.0852812 13.6874730 3.6972623 14.4183315 9.0351337 9.7886033 10.9718362 7.1469474 -0.4727294 9.6998247 10.0238598 0.5273707 8.0456641 4.5273394 NA 1.8492787 10.2991035 10.1702931 11.6616583 11.8476694 10.3668052 10.9768315 3.5570914 11.1812290 14.6085727 9.2156417 10.9007479 12.4498614 11.6739076 3.1902988 7.2068190 8.8560140 12.3920410 -0.4727294 11.6227360 7.4815355 3.5862363 4.1122998 10.1997642 12.1425854 10.3448556 11.3371071 13.1700300 8.5055726 10.7513406 10.7289851 11.3960329 11.4090902 5.6148011 11.4855291 11.5726436 NA 10.5471613 8.9737329 3.9448584 3.5273331 11.0471390 10.1426621 10.8104273 9.5413594 -0.4727294 5.9647452 12.7286971 11.7584601 10.4822622 9.6103751 -0.00110870 -0.00110870 -0.00110870 -0.00268590 -0.00235530 0.00235810 0.00097064 -0.00020264 -0.00020264 0.00176190 0.00176190 0.00176190 -0.00443120 0.00444110 0.00069327 0.00069327 0.00069327 -0.00166290 -0.00166290 0.00458000 0.00208050 0.00166420 -0.00318590 -0.00318590 -0.00318590 -0.01257600 -0.01257600 -0.01257600 -0.00290910 -0.00110870 -0.00110870 -0.00318590 -0.00268590 0.00235810 0.00235810 0.00097064 0.00097064 -0.00020264 -0.00020264 0.00374330 0.89487000 -0.95551000 0.00652620 0.00583090 0.00583090 0.00501240 -0.00296170 0.00444110 0.00444110 0.00069327 0.00069327 0.00069327 0.00069327 -0.00166290 -0.00254560 -0.00254560 0.00264820 0.00208050 0.00166420 -0.95043000 -0.00318590 -0.00318590 0.01516800 -0.02680400 -0.01257600 -0.00290910 0.00000000 -0.00622860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.845 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.845 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 0.000 5.81889401 10.92198029 5.71056126 9.26374079 4.58623031 10.72578401 0.94238313 NA 7.54042875 7.18316789 NA 4.49696719 2.33468268 10.44744365 9.42367145 2.58623632 3.64281708 8.88269012 12.31408504 10.43172271 9.48270794 8.17479738 9.71262742 2.46594835 9.65016696 10.17119519 -0.05769194 NA 10.93017338 2.80035118 12.31707635 11.72752234 5.00846448 10.24244293 6.56076233 9.45412900 6.08703421 0.52737066 0.52737066 4.89657218 9.40180814 9.86458918 10.03744372 -1.05769194 8.21474944 6.88782012 10.54808747 4.81273951 9.94096688 NA 13.13943952 0.74974878 7.11730232 8.53094118 6.50915425 -2.05769194 8.57900096 5.34325502 5.55708532 2.46594835 13.67305885 -2.05769194 10.07069308 -0.47272944 8.07936744 2.84925871 7.37908807 9.41150951 14.321877 5.142050 8.829597 12.905137 10.415575 10.342188 13.687473 13.375212 9.215006 10.785905 12.486918 9.203884 8.856014 8.143275 1.401794 7.646280 11.141589 11.07182044 9.14878034 8.82730999 9.49216104 8.65662186 10.39686601 5.32608068 6.92251543 11.46630588 5.09212285 NA 7.16396359 6.45499836 7.23469770 9.85750893 9.60415456 8.76175732 13.37537498 -0.05769194 12.39885472 11.66165831 10.26430454 10.21179536 12.30760529 8.62975221 10.63608115 9.34751795 NA 9.65948738 -0.05769194 11.62273598 1.64279398 10.81428164 10.19976423 7.45811538 13.86853250 10.50700233 10.65059818 12.60226086 9.85788243 9.99969128 -0.47272944 TCGA-B6-A0IE 38 1 1999 NA breast stage tis tx n1b m0 female 1995 NA yes mixed histology (please specify) 6 black or african american not hispanic or latino 2 2 4 NA NA NA 3 4 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7.282743e-07 1.040392e-07 9.7070153 7.9793126 10.5887525 6.6428849 10.0773728 9.6003683 10.0437357 10.4004687 10.1159415 15.0504031 10.8590184 10.6205504 1.7504779 11.9984215 1.8879931 9.9628688 7.6906608 8.4919609 9.7448475 12.7875604 1.0134980 13.1326316 4.3827641 9.6495125 11.6361903 6.6573842 2.6764931 6.7093361 10.8374263 -0.5715360 8.9472190 6.5370910 -1.5713216 5.9831555 7.6812314 9.1176904 7.0247552 9.5617082 9.2391376 10.1767587 4.6573828 11.9513926 14.5216533 5.8395691 9.8637152 9.7855680 10.0697145 3.8208835 3.6764931 8.7312050 10.5798996 NA 11.3245198 5.2229823 3.5578512 3.4729556 9.2431483 12.1047434 9.6567833 11.5437721 12.4538785 6.5265978 10.8173904 9.8859468 10.7312048 10.4547434 2.5160404 11.7421575 11.8126751 0.7505208 10.5607443 8.5846491 3.7002177 3.5160278 9.3710803 9.6115809 11.1198732 10.6971079 2.5160404 8.3900154 13.0501027 11.2948789 9.3965125 10.0354337 0.0218000 0.5228700 0.5440100 -0.0309500 0.0278450 0.0487520 -0.0645740 -0.0110600 0.0327040 -0.0239460 -0.0239460 1.5406000 0.5114200 0.5316300 -0.5903900 0.5051600 0.5051600 0.0037465 0.0037465 -0.6028700 0.0102850 -0.0583510 -0.6063200 -0.0744920 0.9894900 -0.0740100 -0.0740100 -0.0740100 2.6354000 -0.0540160 0.0218000 -0.0049844 -0.5898000 -0.0102150 -0.0192520 -0.5712000 -0.5712000 -0.0110600 0.0327040 0.0287630 0.0000000 -0.0052610 -0.0486970 -0.0081624 -0.0081624 -0.0089906 -0.0369240 0.5211800 0.4554700 -0.6070900 0.5051600 0.5229400 0.5229400 0.0037465 0.0114000 -0.0560050 -0.5387500 -0.0198630 -0.0418430 0.4616100 -1.2333000 -0.5873500 -0.0019399 -0.0740100 -0.0740100 0.9511700 -0.5718000 -0.0934030 0.511 0.511 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.906 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.380 -0.380 0.511 0.511 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.906 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.380 -0.380 8.35040663 12.43383953 7.40010922 9.80740258 2.63254742 11.44066661 0.01349799 -0.57153597 8.99842147 9.46336477 0.42857122 6.57046900 2.33545467 10.88389310 9.30738321 2.42857122 7.25193302 9.65978705 8.06881105 9.67233499 9.96224607 7.26461618 9.95212779 0.42857122 10.07916888 9.68477456 5.38276062 -0.57153597 10.71136472 3.82088354 14.02551267 13.28916793 7.37401006 9.66995332 7.68595346 10.11331450 3.63801590 0.75052076 NA NA 9.06337701 11.60800850 10.13721877 4.55785118 8.01707452 7.59347255 9.97738784 5.94426579 10.11987320 -0.57153597 10.50504744 0.01349799 4.15648561 10.33946713 5.80560201 7.58843731 8.10628550 7.09034429 10.41796040 -1.57132159 14.39844701 1.42857122 11.52495160 NA 10.58021673 6.64288493 8.36814498 9.06156102 13.370834 5.516028 8.879777 11.998422 10.135494 10.603804 12.787560 11.457853 9.073116 9.958972 12.191986 10.411916 8.731205 8.839017 2.013534 8.200056 11.600368 11.014467 6.417250 8.778367 9.008824 6.745978 10.367451 5.516028 9.786668 10.859018 6.467485 4.183455 4.638022 8.101133 10.799798 10.388930 7.009766 9.141093 6.183453 8.292752 11.421904 7.024755 10.757241 11.097894 10.179273 8.321867 10.606608 7.944266 1.013498 9.470328 8.680048 11.324520 5.439793 11.043490 9.243148 7.954380 14.685420 10.518016 11.146456 11.854700 11.632373 9.761721 1.235911 TCGA-B6-A0IG 50 1 4456 NA breast stage iib t2 n1b m0 female 1994 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 6 3 1 NA 3 4 1 2 4 1 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 1.733986e-07 9.8685902 8.7313713 11.2129182 8.6038474 7.6706506 9.0742188 9.6841872 9.8652665 10.2147848 13.6895664 9.9899654 11.0634862 0.2978370 16.7591053 2.7572153 9.9411910 6.9912724 8.7653912 8.2736338 12.9333905 3.2046729 14.2658225 3.0526767 9.3832582 10.8813387 7.1306756 3.2977930 10.1191611 10.0966625 1.7572366 6.9488379 6.2921394 -0.7022803 4.3638719 9.5698323 9.7536266 9.3332721 9.3852485 9.5651577 10.9580045 2.5457213 10.4167268 14.2960236 9.9088474 9.7370972 10.3114574 10.8359747 4.4063122 2.8213429 8.1834820 9.9519743 NA 10.9768259 7.1147689 4.1051417 3.3852516 10.3373903 12.0876250 10.4863746 11.3535765 12.5319296 7.1926035 10.9461434 10.3090794 10.9717573 10.2395670 3.9702095 10.8974662 11.8558477 -1.7022803 10.1956312 8.9225811 3.9145550 3.5457090 10.5756543 9.7613100 9.5901074 9.5133188 0.2978370 11.5108900 12.7079058 11.9729710 10.3132008 9.4430811 -0.69577000 0.02384700 0.00734440 -0.70775000 -0.70236000 0.04457400 -0.73345000 0.02006300 0.02300500 0.00208050 0.00208050 0.71321000 -0.00553750 0.01768400 3.65690000 1.27340000 -0.71239000 -0.00622860 -0.70550000 0.00972760 0.02960600 0.00569190 -0.73372000 3.65690000 1.21430000 -0.05064100 -0.05064100 -0.05064100 0.00235810 -0.71649000 -0.69577000 -0.01202400 -0.70756000 -0.71533000 0.01112100 -0.70621000 -0.70109000 0.00241650 0.02904400 0.02188400 0.00027728 0.00083195 -0.71203000 0.03129500 0.02132300 0.00000000 0.00000000 0.01419000 0.01419000 0.01349200 1.20290000 -0.71933000 -0.71933000 -0.70729000 -0.60119000 -0.04156700 0.01838300 0.01015000 -0.01143700 -0.01064600 -0.73372000 1.44500000 -0.04480900 -0.05064100 -0.05064100 -0.00138570 0.01796300 -0.73881000 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 -0.205 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 -0.205 8.2977857 13.2875794 6.4373376 9.6476198 2.4088205 11.8939755 2.3852377 0.2978370 9.1290929 7.7469341 -1.7022803 7.4294369 1.8827604 10.8716696 9.3523900 3.5072365 7.2432292 9.2218558 11.5578232 10.8413009 8.8926700 6.7198501 10.6884921 0.6197417 8.4449908 9.6202772 3.1051417 0.6197417 12.0379881 1.9982316 12.1025218 12.3614336 7.1865293 9.7592652 10.2151578 9.7344973 5.5831881 2.2977784 NA -1.7022803 8.8184045 11.2104880 10.0970674 4.1557654 10.1759977 8.4739590 9.4545008 6.9877836 8.5072393 -1.7022803 10.9535400 2.2046729 3.6197182 9.9225309 6.1588722 5.0922032 9.4264245 6.1804284 12.1862436 1.8827604 13.2265817 -0.1173178 11.2642912 1.7572366 5.4576567 4.2285263 8.2991938 9.6706508 13.420080 6.912495 9.152654 16.759105 10.463321 10.845162 12.933391 11.669835 8.423199 10.508153 12.677841 9.598710 8.183482 9.096258 1.882760 7.867641 10.947716 11.4133171 5.1926045 8.4360577 9.2621266 10.7882105 10.5451259 5.3201525 8.8986280 9.9899654 4.3852516 0.2978370 7.3799345 9.1050602 9.7230016 10.5938416 8.2991938 10.3438866 8.7541402 5.6287036 12.8658654 9.3332721 11.0386205 11.2119840 10.6423591 9.7018628 10.8142245 8.3006006 2.2977784 8.9961085 6.8095379 10.9768259 7.4601774 10.6004247 10.3373903 7.2606815 13.4071675 9.9425434 9.6673830 12.9524777 11.7185355 9.7277154 0.8827604 TCGA-B6-A0IH 81 1 3418 NA breast stage iiia t3 n1b m0 female 1995 NA yes infiltrating lobular carcinoma 25 white not hispanic or latino 8 2 3 NA NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.796576 10.138037 11.870798 9.545421 8.264627 8.985185 10.221453 9.621099 10.043400 13.330125 11.305132 10.509977 2.450274 12.761289 3.238756 10.092151 7.918610 9.040681 10.723423 12.823228 1.312781 13.903955 7.663257 9.378225 10.667671 2.897724 NA 9.643668 8.188049 4.120111 8.460474 7.486687 NA 5.705077 10.357701 10.051528 9.461491 11.157309 9.621099 11.585157 7.378850 10.542540 14.293150 7.143776 9.824513 11.146283 10.985185 5.836323 5.056922 9.241130 11.655279 NA 11.221753 7.109773 5.238760 5.078294 10.360429 11.826685 10.511451 12.103923 12.765001 8.982354 11.291471 10.921577 11.577437 11.129104 5.056922 11.702069 12.153695 7.387437 10.332351 9.257619 4.547875 4.921570 10.644573 10.068315 9.982354 9.833182 4.348381 8.585157 12.760257 13.439206 10.317823 10.228042 -0.2036100 0.9645200 0.9624700 -0.2007400 0.0095883 -0.2029700 -0.0072629 0.0000000 0.0000000 0.2891300 0.2891300 0.3782500 0.3323800 -0.0575200 0.1204800 0.1306600 -0.0653130 -0.1515700 -0.1515700 -0.0678600 -0.2012400 -0.4286800 -0.2550300 -0.2550300 -0.2550300 0.2347300 0.2347300 0.2342600 0.3659200 -0.2036100 -0.2036100 0.1895000 -0.2007400 -0.2013700 -0.2029700 -0.0072629 -0.0072629 0.0000000 0.0000000 0.0000000 0.2197500 0.2197500 0.2891300 0.1901000 0.1901000 0.1901000 0.1901000 -0.0575200 -0.0651460 0.1204800 0.1306600 -0.0653130 -0.0653130 -0.1515700 -0.1515700 -0.1515700 -0.0678600 -0.2062700 -0.4098100 -0.4361500 -0.2550300 -0.2550300 0.2051900 0.2347300 0.2342600 0.3751200 0.1758800 0.2454400 0.332 0.332 0.120 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 0.000 0.332 0.332 0.120 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 0.000 9.60554193 13.45026363 7.81419919 10.29689373 4.43045255 10.52707923 1.99084597 -0.00911773 8.67558061 10.96954244 -0.00911773 8.90521700 4.03522799 9.95517285 9.63829037 -1.00926292 10.44615923 9.91638647 11.10359730 9.29689373 9.32889973 7.52999112 11.39756849 2.31275229 9.30030840 10.43584681 4.84881320 NA 10.41604791 4.57579638 12.98942244 12.12075893 9.34508141 10.67382660 8.26928146 9.03659180 4.20028462 0.99080968 1.57579638 4.41709638 8.48868370 8.99645654 9.80781567 6.15070386 8.04171445 6.36587097 9.72045274 6.64904344 9.63829037 1.57579638 12.00048570 3.69126615 5.69127173 9.89030228 6.45607180 7.75570346 9.62836260 8.07031687 9.31838464 -1.00926292 13.94238994 1.31278133 10.09674058 NA 9.02287766 7.42962350 7.79173204 8.62382737 11.818840 4.968114 8.207578 12.761289 10.207578 10.716198 12.823228 11.171984 8.987433 11.099356 13.188049 10.235196 9.241130 10.539654 -1.009263 6.677332 12.842776 11.5997798 7.0622944 8.7606697 9.1507033 7.3911138 11.0490403 7.1252585 7.7356657 11.3051320 6.8173802 2.9908278 8.6073810 5.9605349 12.4419143 11.0197740 7.9880115 8.1905042 12.4603466 8.1657577 12.3133940 9.4614909 10.3980998 9.7672650 11.5628216 10.7945596 10.8209510 9.1239742 0.5757964 9.0777776 8.4379152 11.2217531 7.6773328 10.8038115 10.3604294 7.0782949 13.9906999 9.5578374 10.3245465 12.7904172 11.1143068 10.0649735 3.2387563 TCGA-B6-A0IJ 42 0 NA 7106 breast stage iib t3 n0 (i-) m0 female 1995 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 3.433293e-06 6.589149e-07 8.9123394 8.7961626 11.4026436 7.5594482 8.5711906 8.9771628 9.2891068 10.6445132 13.8566745 12.0431322 9.9819691 10.2277062 0.1650436 11.1545574 2.8088381 10.6071514 5.5743771 7.9479834 9.2195899 6.1365298 -1.8349564 9.1586317 9.0057635 9.8155886 10.8508293 6.8374110 1.1649793 10.7445371 10.8760071 -1.8349564 9.8178304 6.6528249 NA 6.5743771 9.5263811 10.1904712 8.9240414 9.8636901 8.6826548 9.8440256 3.8374084 7.7760105 15.6632605 7.7653630 10.1275200 10.4466257 10.0793706 3.3744414 -1.8349564 8.9962927 10.8738538 -1.8349564 10.5159247 5.2524497 7.5048357 7.0838484 10.1133527 12.0789968 10.1023593 10.6897720 12.8100246 7.1104290 10.8794456 10.6620015 11.7057189 11.0946137 4.7796957 11.7849761 8.9389488 0.7499204 10.7988889 8.9496204 2.8117176 5.1191818 11.9872575 10.0711244 10.9079264 9.0361206 0.1650436 5.2310752 12.5090733 11.8870459 9.8484187 9.0252966 0.9322300 1.0407000 0.1980100 -0.2895200 0.4425700 0.0680910 0.8550200 0.1885900 -0.2790600 0.3424200 0.3424200 1.3571000 1.0767000 -0.2843000 0.0000000 0.0000000 -0.0354480 0.5266600 1.6974000 0.1123600 -0.2709300 0.1942100 -0.2742800 -0.2742800 -0.2742800 0.1969500 0.1969500 0.1969500 0.6016000 -0.0863860 0.3330200 -0.0253460 -0.2883400 -0.3175100 -0.2907100 -0.2924800 0.4473200 0.1885900 -0.2803700 -0.3074500 -0.2877400 -0.3267000 -0.5924400 0.3228600 -0.9126600 0.8388400 0.0856540 -0.2843000 0.6366400 -0.2960300 0.0000000 -0.3007500 -0.3007500 -0.1750000 -0.2801300 -0.0048461 -0.0264410 -0.2758300 -0.2894900 0.6073800 -0.2742800 -0.2742800 -0.0042929 -0.2686500 0.1969500 -0.2151500 -0.0471240 -0.0034763 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 0.000 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 0.000 9.1727135 12.5970053 1.3349115 7.8267633 5.2942678 11.6620888 2.8654240 3.6244168 9.3058153 7.5701267 0.1650436 7.6285097 7.5594482 11.6379301 10.1518941 4.6407192 8.0506818 9.1915089 6.9298573 9.4509656 8.5171174 6.5870499 10.6333549 3.6885497 8.6528256 10.5941307 1.4869203 NA 10.8260955 3.0718828 12.7551046 11.8225272 6.2256817 10.0085141 8.9537038 9.9775639 4.1191818 3.6885497 NA -1.8349564 8.7508868 9.7229277 7.1133525 0.1650436 8.6075352 6.6963667 9.9863609 2.6885385 9.3780898 3.7195777 12.7539928 3.0229714 4.0229625 10.1617591 7.6717293 8.3535743 9.4550043 9.4659100 11.1844025 2.3349115 13.5420265 -0.8349564 10.8835183 NA 9.4223733 2.6244285 7.9707294 8.8285437 12.821392 9.553003 8.712844 11.154557 10.298449 11.476166 6.136530 8.408159 8.604608 10.719574 13.736620 12.700990 8.996293 7.301976 4.252446 7.107500 11.248132 11.3199618 5.5912515 9.3045368 9.5669316 5.9787677 10.8362457 7.8016101 6.0897990 9.9819691 4.4129102 -0.8349564 9.6310619 10.7229971 8.1133525 11.7808450 8.1465529 9.2852233 8.9994566 8.4469154 10.7130656 8.9240414 10.4826807 10.1472661 10.9925266 11.7367381 11.2122798 8.4457561 NA 9.4609897 9.9148549 10.5159247 4.3744414 11.5540790 10.1133527 8.0981005 14.9525055 11.0899835 10.7515908 12.8169901 10.8151397 9.2524483 4.4687658 TCGA-B6-A0IK 63 1 571 NA breast stage iiib t4 n1 m0 female 1994 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 4 1 2 4 2 6 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.947777e-06 1.109751e-06 9.1807715 9.4464380 11.5532464 9.4642566 7.4666157 9.7110652 10.6809032 10.7199921 11.1462339 14.6019479 9.7367050 10.9122663 NA 12.9470034 3.1161152 9.5311561 4.7010832 9.1605126 7.2590766 12.7782528 0.7941871 12.1117915 5.9905873 8.8530840 11.3223189 9.3941034 2.9096771 9.2873788 12.7660932 3.0165855 8.0703147 8.3436543 1.7941871 4.6015480 10.1458659 10.4416488 9.1950700 10.0964486 10.0085096 11.0381578 10.5618232 9.7503246 15.4305130 6.6817163 10.6542428 10.4452422 10.0656535 3.7941871 4.2966923 8.8781129 11.3903802 NA 10.8616248 4.2092272 5.0421190 4.2536187 10.7254205 12.1802326 10.0357765 11.5474072 13.0156769 6.5579568 10.4713228 9.7229555 11.0868955 11.1954255 4.3791496 12.2991749 10.0672090 NA 10.1964920 9.0842094 2.2092350 4.4946332 11.5297465 10.0757342 9.6542427 9.6448982 2.5311444 9.4677940 11.9135639 11.5024122 10.0531490 9.1575953 -0.00678130 -0.00678130 -0.00207840 0.00416320 0.52660000 -0.51943000 0.04273200 0.01056400 0.01056400 0.00083195 0.00083195 3.65690000 -0.52839000 -0.52669000 -0.52010000 -0.51948000 -0.51948000 -0.12317000 0.00736090 0.02188400 0.00583090 0.01474900 -0.54492000 -0.55547000 3.65690000 -0.04373700 -0.04373700 -0.05576900 0.00917050 -0.00221680 -0.00678130 0.00000000 -0.55357000 0.02300500 0.01922300 0.01237600 0.01237600 0.01056400 0.01056400 0.00333180 -0.02058400 0.01461500 -0.51764000 -0.51537000 -0.51537000 0.48372000 0.48372000 -0.52669000 -0.53154000 -0.52010000 -0.52010000 -0.51948000 -0.51948000 -0.12317000 0.00736090 0.00736090 0.01159800 0.00583090 0.01112100 -0.00130390 -0.54492000 -0.05172100 -0.51362000 -0.04373700 -0.07319300 -0.55897000 -0.21775000 -0.00636680 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 -0.150 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 -0.150 8.5038488 12.5439202 4.9641167 8.4089003 3.2101239 11.7481444 2.5311444 2.0165676 8.5379029 7.1692295 -0.7908586 7.7344746 3.9641121 11.8342518 8.9320355 1.7941871 7.5446183 9.0389508 10.5407048 9.6839480 10.9668888 7.3436539 10.4847705 2.3791496 7.4618936 9.7847672 3.1161152 NA 10.3372223 2.9096771 12.5544946 13.3803266 7.7327902 10.0302046 7.6849611 9.9963143 4.0165855 2.5311444 NA 4.7327902 8.6036905 9.4689712 11.6717302 5.0421190 11.2617553 7.2481467 9.6849614 5.4380466 8.5799155 1.7941871 9.9498519 3.4571609 1.7941871 9.7729771 6.6580458 5.6354932 9.3589751 7.6645554 10.5095806 4.6686581 13.8190993 1.2092038 10.9975385 NA 8.1251076 4.7327902 8.6312928 8.4064448 12.214677 7.067208 8.299340 12.947003 10.589689 10.454186 12.778253 10.675814 8.670708 10.392863 13.252084 10.290045 8.878113 10.839040 NA 10.546850 10.620209 11.4657315 5.0918691 9.2134484 8.2993404 9.0872788 11.2315403 5.6521710 7.5130090 9.7367050 8.0734143 1.7941871 8.2645106 7.4387677 12.2120430 10.7866568 7.7866565 9.6004716 10.0880452 6.7483874 9.9916283 9.1950700 10.5815489 9.1488073 10.9893576 9.7714703 11.1355240 9.0872788 0.7941871 9.2462256 6.9971309 10.8616248 6.2204557 11.7894865 10.7254205 7.3589746 14.2649341 11.0834409 10.7628573 11.8144760 11.0768928 9.7050830 2.7941871 TCGA-B6-A0IM 75 1 3873 3836 breast stage iib t3 n0 (i-) m0 female 1997 NA no other specify 0 black or african american not hispanic or latino 3 1 2 NA NA NA 1 1 4 4 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 11.4897395 9.8971490 12.2773781 10.2200428 7.6133563 8.3798128 10.2404933 9.6610726 8.8563231 13.0561643 11.8680766 10.3702749 -1.9099596 13.3000849 4.1121580 9.3786601 6.3089633 9.0227470 7.3495369 13.0600348 6.1396434 14.2086338 3.2597244 8.3281987 11.3524762 7.3234133 -0.9102307 7.0264316 9.5579090 0.8971630 9.2427125 7.8760638 -0.9102307 3.7336472 10.7773885 10.1722757 9.8147342 10.9299819 10.5031575 12.2963506 2.9477784 11.1652732 14.9196778 8.7539481 10.3777950 11.0634914 12.4848595 4.7480050 NA 9.3047202 10.9216950 -0.3251778 11.1142412 5.6289514 4.4296427 5.8177153 10.1256241 12.2122985 10.2025594 12.3983464 12.9835222 8.1314532 11.5038186 11.3396586 11.5225969 11.5771317 6.2647203 11.5134352 13.3858858 NA 11.0577408 9.3826908 2.3046863 4.1558868 10.4243467 10.5218139 10.3694046 10.4997153 1.6747770 5.3186133 11.6032749 9.7318458 10.9407622 9.5726021 0.00555290 0.00555290 -0.02041200 -0.00498440 -0.02054900 -0.02794500 -0.01794100 -0.01409000 -0.01409000 2.94000000 2.93310000 0.81866000 0.00194180 0.00194180 -0.01502800 0.05209900 -0.84579000 0.00805670 -0.00339830 -0.01354000 -0.00802440 1.59150000 0.03510000 0.03552400 0.03552400 0.04117500 0.04117500 0.04939800 0.01796300 0.00555290 0.00555290 0.00138680 -0.02054900 -0.01470600 -0.02794500 -0.01794100 -0.01794100 -0.01409000 -0.01409000 -0.01862800 0.00013863 0.80772000 -0.85829000 -0.01100000 0.00249690 0.00249690 0.00249690 0.00194180 0.00194180 0.02721600 -0.84865000 -0.84579000 -0.01216200 0.00805670 -0.00339830 -0.00339830 -0.01574100 -0.79878000 0.78659000 -1.07680000 -0.85689000 0.03552400 0.79142000 -0.78707000 0.04117500 0.01796300 -0.02102900 0.04471500 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.807 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.807 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 0.000 8.55739975 13.88606186 9.36242386 9.99630894 1.77795619 10.96515946 -0.32517782 -1.90995958 8.83126100 9.05269004 NA 7.98461156 1.41169740 10.15453688 9.09471666 0.89716296 7.69342075 9.28270320 6.89069353 8.75512993 9.75750885 7.56146896 11.32386299 1.54922558 9.94894055 9.70817947 1.25972444 0.08976931 10.46917241 2.84468694 11.55663528 11.64869305 8.25971926 10.09647073 8.00567339 8.88258436 6.97853773 1.08976931 -0.91023069 1.25972444 9.03084174 8.13828102 10.16326625 4.25971690 9.19162532 5.49067281 9.53532632 5.73364990 9.68131643 NA 9.39585584 2.08980320 5.04399186 10.61121785 6.40090675 -1.90995958 9.14032289 7.92742184 1.41169740 0.41175163 13.30623680 1.08976931 10.23636274 NA 8.07421266 4.68970731 9.20223355 8.56856382 14.9152898 6.2190775 8.4004069 13.3000849 9.7732274 9.8346280 13.0600348 15.2786340 8.0356624 11.1187361 12.6719360 10.2465092 9.3047202 8.4637467 -0.9102307 6.8906935 12.2357262 11.2754439 7.4949356 8.9258443 9.1565559 9.5975887 10.6975867 5.5244210 4.0205289 11.8680766 5.0555775 2.7902299 8.4917401 7.8157394 11.5102807 10.3731718 7.6934207 8.8825844 14.3202461 3.7902299 11.5007038 9.8147342 9.7484518 8.7919667 11.6648605 9.0827324 10.6506045 9.1079943 -0.9102307 9.0519455 1.5492256 11.1142412 7.6366884 10.7921832 10.1256241 7.2496653 13.9159204 10.3113812 9.1672774 12.8819743 9.6123755 10.0436268 3.0897863 TCGA-B6-A0IN 45 1 2573 NA breast stage x t1c nx mx female 1996 NA no other specify NA white not hispanic or latino 3 2 2 NA NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.121176e-07 9.5860817 9.2784650 11.0048759 7.5556705 8.6382328 8.9069474 9.5347283 10.2266061 10.0414846 13.8755632 9.8637926 10.5022653 1.2373802 14.1575947 2.8223223 9.4776678 4.4389848 8.6141301 7.7324090 12.7952958 0.9580631 12.8027413 0.9154062 9.5358286 10.1514396 6.1538297 NA 10.9457477 9.9909045 2.3748447 7.2685719 6.9815148 NA 5.8102426 7.9570846 9.5565741 9.0702436 9.1739914 9.0778169 10.7114651 1.2373802 9.8659813 14.6078230 7.6524700 9.8342887 9.8783215 10.2619392 5.6019253 6.2552760 8.3666365 9.6141301 NA 10.9481599 5.6433454 6.2373534 5.5878510 10.2558320 11.7506863 10.2985897 10.9635717 12.0086779 7.6019260 10.8656168 10.0759271 10.1728133 10.0101629 3.0853567 11.3424764 11.8236304 -1.0846703 10.2513740 8.4814794 4.7227829 5.3416905 10.2435394 9.2630469 9.5966639 9.3717799 2.9154253 9.4497283 11.7223778 11.1547256 9.6339582 9.1478465 -6.5050e-03 5.4259e-01 5.4259e-01 -8.8526e-03 -8.8526e-03 4.8579e-03 8.0745e-02 5.5071e-01 3.1910e-03 1.0285e-02 1.0285e-02 5.6045e-01 5.3397e-01 -1.3858e-03 -7.7821e-03 -6.9195e-03 -6.9195e-03 -1.6429e-02 -8.2388e-03 -9.6987e-05 6.5262e-03 -2.3050e-02 -6.1662e-01 8.2647e-01 -4.9695e-02 -2.8218e-02 -2.8218e-02 2.7351e+00 -1.0792e-02 -6.5050e-03 -6.5050e-03 -1.2856e-02 -8.8526e-03 2.8460e+00 -4.0162e-03 5.8081e-02 5.8081e-02 -2.6988e-02 3.1910e-03 -9.4046e-03 5.1228e-01 1.0674e+00 -6.0352e-01 2.7428e-03 1.1819e-02 1.9418e-03 -1.0791e-02 -1.3858e-03 -1.3858e-03 -7.7821e-03 -6.9195e-03 -6.9195e-03 -6.9195e-03 -8.2388e-03 -8.2388e-03 -2.7724e-04 -9.6987e-05 -6.6226e-01 2.2725e-02 4.4411e-03 -6.1662e-01 1.5908e+00 8.1959e-03 -6.3953e-01 -7.9343e-02 2.6357e-03 -9.9609e-02 3.1572e+00 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.498 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 0.000 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.498 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 0.000 9.6019260 12.2477418 6.1052506 9.5003880 6.3743649 11.3740884 4.0028915 -1.0846703 8.0395469 9.2305751 NA 8.0265611 5.9815148 10.9652740 8.5301351 3.7734056 9.2100462 9.1775202 6.9433318 12.2964276 9.5777022 6.6296714 12.4605106 3.0853567 5.9815148 9.5041401 5.6019253 -1.0846703 11.3766491 3.0028825 12.8310248 12.6873275 9.1716342 9.9118989 7.6331020 10.2106205 4.0447089 5.9041107 NA 2.7227720 8.9252542 11.4560379 10.0915986 6.5301347 9.6856350 8.9140158 10.0619942 5.8342890 9.7227804 0.5003942 9.7538415 2.6158635 9.5466024 9.1503746 6.7814056 6.5447821 9.8601375 8.6279526 12.6746895 -1.0846703 13.7396384 0.9154062 11.2759982 NA 9.2294420 7.4152711 8.6786378 9.2065961 11.9791778 6.4700146 9.1052501 14.1575947 9.9203481 10.7231828 12.7952958 12.1896580 8.6935026 9.7467326 12.7440578 9.7577758 8.3666365 8.5116151 0.5003942 6.8102426 10.9069473 10.840609 5.237353 9.027865 8.773406 7.281747 9.457780 7.541135 8.320567 9.863793 7.312030 NA 5.722780 6.175357 10.118162 10.654362 7.837267 11.839496 8.471932 7.163353 11.081422 9.070244 10.441436 10.155620 10.225470 9.748315 10.178695 8.450701 NA 9.742546 8.734008 10.948160 7.904110 11.129137 10.255832 7.387101 14.218314 10.693913 10.885531 13.185502 9.709029 9.460390 3.438985 TCGA-B6-A0IO 66 0 NA 5042 breast stage iia t2 n0 (i-) m0 female 2001 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 4 NA 3 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 5.548757e-07 9.47619858 9.45674333 11.65151856 8.43907454 8.90878769 9.47819627 10.46179998 10.71430769 9.87986303 14.83709487 11.51612317 10.94799585 0.39604986 12.31518999 2.56596268 8.75469847 6.92742836 8.71006389 8.96874742 13.29162261 5.84725784 13.92379921 2.20338912 9.44588227 10.91322460 5.92742954 -0.01902419 9.74032097 10.05604318 1.39604986 7.70893005 5.75359919 NA 2.20338912 8.70552353 10.92889022 9.28479056 10.06315884 10.23091340 10.27294791 2.39604986 11.69009364 14.66526534 8.78020510 9.99363431 10.74643404 10.63803047 4.77108797 6.15759755 8.86365293 10.02494848 NA 10.26139400 3.44044730 4.54579543 3.68144927 10.54801520 12.23692357 10.87532239 11.25402831 13.09219984 8.48880459 10.53719656 10.02631442 10.11286678 10.75387417 4.68144927 11.76018198 12.18802414 0.39604986 10.60975912 9.04530344 3.92242623 2.91960705 10.99107168 11.21502888 10.94438762 9.85496653 7.32678450 5.09648536 14.39536473 10.72303851 10.67391589 9.16423167 -0.1830300 0.3672900 0.8154000 0.0000000 -0.0130890 -0.1294800 0.4187100 0.2340100 0.2340100 -0.0039635 -0.0039635 -0.0043785 0.2061300 0.2321600 -0.1998200 0.2089200 0.2089200 0.6857700 0.1165400 0.1763800 -0.2881700 2.6137000 -0.6345900 -0.4423900 0.7674100 -0.2302600 0.4988000 0.4988000 0.3847500 -0.2135100 -0.6154300 0.2095300 0.0035656 -0.1409800 -0.1395300 0.4187100 -0.4230500 0.2104500 0.2340100 0.2340100 0.2344800 -0.6423300 -0.0039635 -0.9340500 -1.2929000 -0.6144700 -0.6369400 -0.6239500 0.2230500 -0.1998200 0.2089200 0.2089200 0.2089200 0.6857700 0.0947760 0.0947760 0.2135100 -0.4337600 0.2456600 0.2241300 -0.6345900 0.4478900 -0.6146600 -0.6815500 0.4988000 0.4081700 0.2201200 -0.2263300 0.228 0.228 -0.200 0.009 0.686 0.117 0.214 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.385 0.385 0.220 -0.226 0.000 0.000 0.000 0.000 -0.129 -0.129 -0.011 -0.429 0.234 0.234 -0.391 -0.619 0.000 0.000 -0.614 -0.614 0.000 0.000 0.228 0.228 -0.200 0.009 0.686 0.117 0.214 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.385 0.385 0.220 -0.226 0.000 0.000 0.000 0.000 -0.129 -0.129 -0.011 -0.429 0.234 0.234 -0.391 -0.619 0.000 0.000 -0.614 -0.614 0.000 0.000 7.7926524 12.0864819 8.1154359 8.2555819 3.8554815 11.9735942 0.3960499 NA 9.5426160 7.2446702 0.7179999 6.7754259 2.7883725 11.2182198 9.4411245 3.6439716 6.3267854 9.8043771 8.3238253 10.1370928 10.0322188 8.2130308 9.5483322 0.4422269 10.1662983 9.8838873 2.0964980 0.9809758 11.0949690 2.6439716 12.9897886 12.9603755 6.4184143 10.5343191 6.5407062 10.0560432 6.0107575 -0.6040598 NA 1.3960499 9.1059928 10.5346391 9.7813705 2.9810124 9.1717645 6.5709729 10.1733026 2.5659627 8.9506361 -1.6038405 11.0383247 0.7179999 4.8879005 10.7553494 6.3154467 -0.6040598 8.7969267 6.4781969 4.0964896 2.2033891 14.1532029 -1.6038405 11.0075332 NA 9.3797535 3.7536045 8.4513298 9.4390745 13.9726344 6.6814493 8.4294703 12.3151900 10.9281597 10.8054383 13.2916226 13.5418601 9.2995904 11.1444499 12.9961925 11.0647108 8.8636529 8.3282620 -0.6040598 7.7134601 11.4790280 10.6173324 7.2066188 9.1197081 9.1575986 8.7134601 9.7237459 5.8958939 8.6224597 11.5161232 4.9506364 3.3960499 6.5201692 7.6160628 11.9568578 9.2640982 8.5214607 8.8988792 11.1619550 4.1774076 13.6712334 9.2847906 10.2532508 10.3542375 11.2299257 8.2431045 10.2786904 9.2025970 -1.6038405 9.6448526 2.9196070 10.2613940 8.3647142 10.5802842 10.5480152 7.4458955 13.6683126 10.4291261 10.5877234 13.1980082 10.1396195 9.1425618 -0.6040598 TCGA-B6-A0IP 74 1 3926 3374 breast stage ia t1c n0 (i-) m0 female 1997 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 5 2 2 NA NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 10.5055674 9.6890800 12.1506018 8.9130800 8.2111724 9.3753286 11.1278479 9.4927237 10.4549315 9.6619005 11.1525558 10.5369137 -0.2510236 13.3286021 2.8079113 9.5771476 6.9714033 8.7358014 11.3512460 13.1589324 1.7490193 13.7807411 6.2084431 10.1156976 11.0206687 4.4678272 -1.8359861 8.9454084 9.7248591 0.1640139 8.6827018 7.0405659 0.1640139 3.6876094 9.8342623 10.7090131 10.1105894 12.0204742 10.1363105 11.4159748 3.8919732 11.9986185 14.9372780 7.9870019 9.8142029 9.9038293 11.3228161 4.7339020 7.0000992 8.3339738 10.9480700 NA 10.8276068 5.4586707 5.6152603 4.2084392 10.3182339 12.0419079 10.9602911 12.9612542 12.9806323 8.6876105 10.8349261 10.9778619 11.5220130 11.3289556 4.6069929 13.2568471 11.5380013 -1.8359861 10.2607639 8.8015794 4.0232731 4.8505494 11.4911802 10.0413328 10.0716904 9.9371878 2.6876206 9.6993240 13.1225561 12.4782778 10.4296637 10.0278478 0.00504260 0.63344000 0.70766000 0.01999000 0.01500400 -0.00616240 -0.00505650 -0.00809630 -0.00809630 0.00325750 0.00325750 0.00325750 0.00381570 0.00381570 0.00645370 1.24060000 -0.00281870 0.00534140 0.00000000 -0.00920060 -0.00062666 0.01272200 -0.00298120 -0.00298120 -0.00298120 -0.00519480 -0.00519480 -0.00519480 0.01077000 0.01021200 0.00504260 -0.00768210 0.01999000 -0.00616240 -0.00616240 -0.00505650 -0.00505650 -0.00809630 -0.00809630 -0.00809630 0.00214700 -0.00560950 0.00325750 0.00525240 0.00525240 -0.59463000 0.00450760 0.00381570 0.01300100 -0.00786560 0.00645370 -0.00281870 0.00854100 0.00000000 0.00000000 0.00000000 -0.00920060 -0.00062666 0.01272200 -0.59872000 -0.00298120 -0.00298120 0.04308300 -0.00519480 -0.00519480 0.01077000 0.00478550 0.01120700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1036280 12.9900012 6.4586691 9.9251843 3.6339310 11.2329948 5.7490113 0.7489764 8.9197709 7.5281829 -0.2510236 7.5307645 3.9969400 10.1094925 9.5077895 2.3339675 7.7952260 9.6372471 11.1947158 10.1860697 9.6345092 7.4494508 10.3563415 2.1640461 9.8881361 10.2019388 3.4119821 NA 10.9513391 3.8364695 12.8663296 12.1849418 7.4000631 10.0720659 7.1668640 9.4355117 3.6234806 1.3339961 0.9713688 3.9714056 9.3544907 10.0386458 9.9474562 4.6718425 8.4466276 5.8079036 10.7270065 5.3928669 9.6142289 -0.8359861 12.3129224 1.3339961 4.1864134 10.0220491 6.3692065 6.3087067 8.4048401 6.9021411 7.0157975 -1.8359861 13.9878637 0.1640139 10.1745767 -1.8359861 9.1491791 4.7639639 8.0048266 9.3747200 14.685142 5.262080 8.538001 13.328602 10.342714 10.902774 13.158932 12.963786 9.528791 10.581110 13.089603 9.120425 8.333974 9.681226 0.485942 7.483721 11.068495 11.2313149 7.5303712 9.2751843 9.1513127 8.7695281 10.5564063 7.6111318 8.2084426 11.1525558 6.1808560 2.9714056 8.5787338 7.0776863 9.8479205 10.5955463 7.3035999 8.6111318 12.4400276 6.4540673 11.2169835 10.1105894 10.4134585 10.3445794 11.2287914 9.5633265 10.8224833 8.9560256 0.1640139 9.6023051 8.4972040 10.8276068 5.9454087 10.9992010 10.3182339 7.5197078 14.4785080 10.2630676 10.5617233 12.8885092 11.1325355 10.3479941 -0.2510236 TCGA-B6-A0IQ 40 0 NA 4285 breast stage iiia t3 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.144431e-06 4.161568e-07 8.9413687 9.5307257 11.9191935 7.7863304 8.7764962 9.0259808 9.3778122 10.2001425 9.1530329 12.0425905 10.9787306 10.7214315 3.2627639 11.5535075 2.0701145 7.3180511 7.4074267 9.5423792 7.5869493 6.9527669 NA 11.2238565 10.5011734 10.0600248 11.1209440 3.8774792 1.0701145 11.2069316 12.4003202 3.0176547 9.9307672 6.8552261 9.2191448 5.3071625 9.2968797 9.9289926 9.4897827 9.5154341 9.3429200 10.4837515 7.9440069 9.0498548 14.2306478 8.1982579 9.5142511 10.7668428 10.3571762 4.7705648 -0.7372061 8.7626146 10.1927667 -0.1523237 10.4099735 3.3071662 5.5106961 4.4525954 6.9316535 12.8309623 10.3469126 10.9795881 12.9227645 5.9281050 11.5868085 11.0715317 10.9976899 11.1503700 3.8774792 11.5782012 7.2989424 -0.7372061 10.2694453 10.0873297 5.0326739 3.2169670 9.4556778 9.8321497 10.4948897 8.4513574 1.4326922 9.5254507 12.2831409 12.5144729 10.6186703 10.8763279 0.1103800 2.4562000 1.5588000 -0.3941700 0.4196500 -0.4055000 0.2942100 0.0884030 -0.0321150 -0.4116800 0.0065262 0.5633000 1.0134000 -0.3980800 -0.0511810 -0.0071958 -0.0071958 0.2189900 0.0093098 -0.3967500 -0.3938600 -0.5382500 -0.3332500 -0.3332500 -0.3332500 3.6569000 0.2849600 0.1330200 0.1547200 -0.5059800 0.1103800 0.4194900 -0.3917400 -0.4055000 -0.4055000 -0.7389200 0.2820000 0.0884030 -0.0269880 0.0793030 -0.4217800 0.0151680 -0.4270200 0.3569200 0.3569200 -0.4174200 -0.1676400 -0.3980800 -0.4517400 -0.0511810 -0.0071958 -0.0071958 -0.0749560 0.0924600 0.0093098 0.0093098 -0.8336500 -0.3835800 -0.8649200 -0.4010800 -0.3332500 -0.3332500 0.4747800 -0.3053400 -0.2837000 -0.0583270 0.4418900 -0.3937500 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.122 0.475 0.000 0.247 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.437 -0.287 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.122 0.475 0.000 0.247 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.437 -0.287 8.0309529 12.5015465 6.4722213 9.4963882 3.5846980 13.1184644 1.5846739 2.4326922 9.5283836 12.7748300 6.1515118 7.4891808 7.4150538 10.8763279 11.3061378 2.4326922 5.8774792 10.1172475 7.8866501 10.2115008 8.1283006 7.7201492 11.2925734 -0.7372061 8.2865231 10.0600248 4.1454085 NA 9.9334248 3.7222037 13.9931061 12.8990534 7.3555255 9.9276603 10.0138942 10.4516665 4.8019295 1.8477164 -0.7372061 6.5573886 9.6126028 9.4764803 6.4226400 2.5106835 9.1224354 6.0375557 9.9343096 5.7139789 9.9825852 7.1756583 12.1094343 -0.7372061 5.7784688 10.2840853 7.8757844 6.8774780 8.3907631 8.3621165 9.4276755 3.5481653 14.7241361 1.2627939 10.7400210 NA 9.6453926 5.6806197 8.7108849 8.1160783 13.2182514 9.1583438 7.9138205 11.5535075 9.7912226 11.7911006 6.9527669 8.9606050 9.4016804 11.0673030 14.6180509 12.1874884 8.7626146 8.7088180 0.2627939 7.7119175 10.2169649 11.3355711 4.6026172 8.4903603 10.9147172 8.6942663 10.4214256 5.9492688 4.8626795 10.9787306 11.0431033 -0.1523237 10.4682564 9.0083505 11.4075862 9.5118821 8.2429083 9.4301868 6.2343116 6.6721594 11.4785761 9.4897827 10.2198707 10.8682481 11.8430272 10.8493739 11.0153583 8.4538278 NA 9.1829428 8.9129229 10.4099735 3.7863350 11.3095090 6.9316535 7.8941824 15.2411439 9.8192746 10.5186824 11.9839746 12.2193263 9.2592421 7.0109611 TCGA-B6-A0RE 61 0 NA 7777 breast stage x tx n0 (i-) m0 female 1989 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.323542e-06 7.282743e-07 9.8963687 9.0354645 10.8957846 8.2824982 9.1249226 8.8022465 9.7890941 10.6871071 11.2721821 13.1517166 10.0997792 10.1471830 0.2110122 11.6119154 2.0854926 11.6454904 6.8109482 8.5494008 8.6908162 6.2035027 NA 11.7604997 6.0607024 9.5313702 10.0875529 5.3942569 -0.3738880 10.1318850 11.3392451 2.7135419 9.1239253 7.8928597 1.9480027 3.9114711 8.6799994 10.6823724 9.2526950 10.5415794 8.4008607 10.5231626 0.9480027 7.5773578 15.0924367 8.2038046 10.3742663 10.4844430 10.3055536 1.9480027 NA 8.8367447 11.1479192 NA 10.9434860 4.0183938 4.9836275 5.5087170 8.6047837 11.6891314 10.0497146 11.8566944 12.3076413 7.1959292 10.7890941 10.2100963 10.6491347 10.2878516 4.2984970 11.6928354 8.3037931 2.3265086 11.3730076 9.7469593 3.0190792 4.1806651 9.6004879 10.3291118 11.0952065 9.7254213 1.9480027 5.6147570 11.3416065 13.0498459 9.9264260 9.5434454 0.7679200 1.4853000 0.4669200 0.1319900 0.0000000 -0.4563600 1.1115000 0.0349590 0.0397400 -0.1955000 1.9142000 0.6570000 2.1230000 -0.1892300 0.1127700 0.1108100 0.1108100 0.5493000 -0.4556500 0.4086100 -0.4525400 -0.4570100 -0.4258200 -0.4063900 0.9795600 -0.0271240 -0.0271240 -0.0271240 0.1963900 -0.3881700 0.0540910 -0.4180500 0.1351000 -0.4585400 -0.4708800 0.0282000 -0.5480500 0.0349590 0.0349590 -0.4897400 0.7467000 0.2122500 -0.2885700 0.5560200 0.5560200 -0.1634500 -0.6863300 -0.1892300 -0.1892300 0.1190200 0.1108100 0.0400440 -0.0073339 0.0774300 -0.4556500 -0.4427500 -0.4770200 -0.8109600 -0.4285500 -0.4216700 -0.4258200 -0.4063900 -0.3620900 -0.0271240 -0.0271240 0.3492500 0.2426400 -0.3931900 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 -0.453 1.416 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 0.000 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 -0.453 1.416 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 0.000 6.9344127 13.3567558 6.7450141 9.3143238 1.2110122 11.7901947 -1.3740750 7.6704679 9.1038317 7.1768204 6.6090664 7.5744406 5.7135364 10.7277209 9.3454622 1.7960162 5.7345985 10.9953982 7.1018066 9.7075569 9.3600209 6.4008607 10.8536894 0.2110122 9.4245453 9.9934881 3.3265086 NA 9.8251323 3.4840608 13.1972928 12.4461526 8.0793440 9.8566944 8.0375843 9.7372091 3.3265086 1.6260653 -1.3740750 -0.3738880 8.4156070 9.4887108 8.2536074 3.9114711 10.1549133 7.0439263 11.1308924 4.4334269 10.0977486 3.0855096 12.4652772 2.0854926 4.1496333 10.4169147 8.5116021 5.7345985 7.7707319 5.7656249 7.5568110 5.9206935 13.5392901 -1.3740750 10.6827112 NA 9.7055583 3.6704665 9.1564798 7.5831753 12.926599 8.805982 7.936686 11.611915 9.780202 10.790352 6.203503 9.567121 8.802247 10.803804 14.243340 12.016780 8.836745 8.410708 2.626065 7.948002 11.206568 10.197826 5.591859 9.260884 9.248125 8.056526 9.146329 6.203503 4.815898 10.099779 11.276228 3.580266 8.574441 8.095837 11.949973 10.801935 8.190223 9.911476 7.998938 5.269931 9.904993 9.252695 9.870437 10.290521 11.093934 10.502974 9.857295 9.049189 1.211012 9.861645 7.052339 10.943486 6.702889 9.900370 8.604784 6.439854 14.489389 10.257705 10.528449 12.301369 12.070830 8.519375 2.433440 TCGA-B6-A0RG 26 0 NA 2082 breast stage iib t3 n0 (i-) m0 female 1991 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 1 2 5 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 3.121176e-07 9.50711852 9.54097209 12.23077471 8.44536751 9.30523276 9.14871629 10.01694879 9.60167553 9.48170944 14.51534370 10.96764877 10.50409299 0.60824151 13.24103332 1.02332633 7.08939222 5.08939222 8.04844219 9.91963520 13.41776547 2.72373329 14.86065968 3.41562348 9.82727235 11.78672262 8.22297502 1.34522604 7.81976397 10.25512396 0.60824151 7.56246148 7.87192556 3.77818755 4.11076412 9.50711852 9.55565877 8.64168836 11.40916518 9.13704492 10.66264346 1.02332633 11.89943597 14.22309012 7.98582316 10.42737990 11.12001789 10.83708394 4.77819280 7.67435472 9.44851859 11.22970670 0.02332633 10.98728256 5.06769894 3.60826517 3.77818755 10.37479422 11.94216600 10.40376386 12.79994141 12.75409130 8.40700725 11.14127050 10.09850786 10.92793741 10.06906249 4.23275284 11.82824044 11.46079477 1.34522604 10.34466719 9.06769679 3.03049500 2.72373329 10.66354770 10.92454680 10.17558760 9.70805132 0.02332633 9.04567067 12.71711639 10.18820964 10.35141665 9.54293899 0.0282000 0.8168800 0.8251700 0.0824760 0.7512700 0.1291800 0.0523830 0.9235100 -0.4053900 3.6569000 0.8633400 0.8633400 -0.0414310 -0.0414310 0.7410000 0.0225850 0.0535210 -0.0712050 0.0105640 0.9194600 -0.0024938 0.2325600 -0.4577900 0.4449400 0.9489500 -0.0317680 -0.0317680 -0.0317680 0.1033700 -0.8598700 0.0282000 -0.0257560 0.0824760 0.0748400 0.1291800 -0.0462680 -0.0587310 0.9235100 -0.4053900 -0.4053900 -0.4356100 0.0489720 -0.8909700 -0.0332690 -0.0332690 0.0076392 0.0468420 -0.0414310 -0.3299400 -0.8817100 0.0225850 -0.8901500 -0.8960700 -0.1295300 0.0105640 0.0105640 -0.3913900 -0.0086556 -0.5143400 -0.8626300 -0.4577900 0.4449400 -0.9634400 -0.0317680 -0.0317680 -0.0077482 0.0044446 -0.6657800 0.000 0.000 0.000 -0.858 0.000 0.000 -0.375 0.000 -0.282 0.000 -0.863 -0.458 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.129 0.129 0.000 0.000 0.000 -0.340 -0.436 0.000 -0.891 -0.028 0.000 0.000 -0.162 -0.162 0.000 0.000 0.000 -0.858 0.000 0.000 -0.375 0.000 -0.282 0.000 -0.863 -0.458 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.129 0.129 0.000 0.000 0.000 -0.340 -0.436 0.000 -0.891 -0.028 0.000 0.000 -0.162 -0.162 7.5624615 13.2733791 7.7613950 9.9767717 0.3219281 11.2962241 1.0233263 1.0233263 8.5051021 7.7272064 NA 7.6635474 3.6671541 10.8820609 8.9789527 2.7237333 7.2327557 8.9614121 6.8498517 10.5740496 9.7751732 7.4620949 10.0183632 NA 9.7167898 9.5291143 3.0233086 4.3808541 11.1522637 3.0233086 12.3149052 12.1706667 7.4199079 10.1806496 8.1957305 9.6007316 4.0676989 2.7237333 1.6082888 2.9301885 9.5997872 10.4719354 10.3259417 3.4156235 10.2152873 6.6232158 10.0345301 5.7914859 10.3081268 NA 10.4236485 2.9301885 4.6380101 10.0578473 7.5757797 2.3452260 9.3418457 6.0119875 6.2521223 6.6743547 13.8529760 1.0233263 10.4129341 1.8306610 7.7580126 4.0676989 8.6653544 8.3017522 14.236154 5.652659 8.634328 13.241033 10.832669 10.880895 13.417765 12.835480 9.232756 10.310438 12.668286 11.123308 9.448519 9.897516 NA 7.974587 12.906328 10.9872826 6.8812841 9.6992598 9.3918092 8.7289351 10.3547796 4.8046628 8.3110153 10.9676488 6.4990358 2.8306610 6.6743547 7.1498528 9.8322669 9.4714192 9.7956173 8.4868270 11.0816328 3.5468698 11.7886117 8.6416884 10.3620391 10.2730088 10.7499467 9.0062963 10.6255376 8.8843897 0.6082415 8.7330930 4.4827321 10.9872826 6.0345305 10.9192566 10.3747942 6.6743547 13.3255847 9.7840228 9.5360432 12.5876905 10.6389324 9.1500072 2.3452260 TCGA-B6-A0RH 51 1 6456 5749 breast stage iia t2 n0 (i-) m0 female 1991 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 6 3 3 NA 2 3 2 2 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 2.427581e-07 8.57371497 9.02697817 11.48891477 6.90705650 9.38330015 10.13637059 9.60016343 9.66270878 10.74335053 12.84570034 10.66698705 10.04728140 4.88623797 14.95528127 2.62989279 10.16776322 5.51525514 7.36986601 9.74595275 12.99743382 NA 13.70797439 7.17077934 10.34935886 10.97739606 6.41997534 0.04488368 7.41997450 11.35554799 0.04488368 8.15867734 7.52066896 NA 4.41416937 8.53143527 9.38032556 8.99037914 10.18874361 8.74883890 10.36535977 12.58828933 10.82875200 14.81268864 6.90994707 10.24746723 10.01599968 10.21067974 4.60971951 3.54743749 9.09205914 11.80620941 NA 11.57907599 5.14647194 4.78189997 4.54743749 9.82081989 11.91478608 10.56063510 11.59263311 12.64647391 8.06359893 10.18235338 9.01086374 11.04587417 10.55536975 2.45998236 13.82311505 11.21109831 0.45995614 10.61605576 9.40175397 3.69493589 4.76375149 11.32686526 9.97813412 9.15607094 9.24051254 6.84798939 9.45220293 12.90937935 12.15313297 9.95832332 9.77115335 0.01516800 0.96535000 1.03980000 -0.01354000 1.32580000 -0.58992000 0.02202400 0.00819590 0.00819590 -0.60632000 -0.60632000 0.61975000 0.02118300 0.02118300 -0.00526100 -0.00526100 -0.00526100 -0.60293000 0.50030000 -0.00097017 0.01796300 -0.02318900 -0.60709000 3.65690000 0.10143000 0.00416320 0.00416320 0.00416320 0.53309000 0.01698500 0.01516800 -0.59507000 -0.01354000 -0.58588000 -0.57881000 0.02202400 0.02202400 0.00819590 0.00819590 0.00819590 0.01153900 0.01153900 -0.60632000 -0.00705760 -0.00705760 -0.00705760 -0.00975410 0.02118300 0.02118300 -0.00526100 -0.00526100 -0.00526100 -0.00526100 0.23798000 -0.58176000 0.11418000 -0.00097017 0.01796300 -0.00798350 -0.59643000 -0.60071000 -0.60526000 0.03905400 0.00416320 0.00416320 0.47456000 -0.58912000 0.02707600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.469 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.469 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 0.000 7.8608523 13.5098638 6.4988923 9.0801926 1.7819052 11.0847682 -0.5399390 -1.5399390 8.4864960 8.9060220 NA 7.5737146 4.1604120 11.4349250 9.2793536 2.4599824 5.3426152 9.0847683 7.2413321 11.4755620 8.7819010 5.9677681 11.4980344 NA 7.4933960 10.1083303 4.2928627 0.7819052 10.5837708 1.9194164 13.7679917 13.2009656 8.4443913 9.7540191 12.1892748 9.9642952 4.3426187 1.6298928 NA 9.5560289 8.3318781 10.0514951 9.7226549 2.4599824 9.1122800 7.7007643 9.4148960 6.5943993 9.2920715 NA 10.1051808 4.1038249 3.9518302 10.4955142 7.8953099 5.2413330 9.2106796 6.6448484 9.1172911 2.5474252 14.6944534 NA 9.9013608 -0.5399390 8.9049877 5.9437877 7.7886479 8.9737002 13.342756 6.167332 7.712638 14.955281 10.288109 11.507949 12.997434 11.602399 9.070075 9.279354 13.323965 9.187893 9.092059 10.997434 -1.539939 7.743061 10.718833 11.127084 4.726760 8.816425 9.906022 7.664544 9.926253 5.717361 7.041173 10.666987 8.582801 2.629893 4.935705 6.305150 11.276156 10.159979 7.476781 9.925539 8.780773 5.305464 10.336540 8.990379 10.991598 10.394769 10.015041 9.112818 10.735806 8.037401 5.951826 9.545186 6.089329 11.579076 7.267328 11.435821 9.820820 7.440113 14.394124 11.051261 10.704931 12.254896 11.242152 8.835012 3.044936 TCGA-B6-A0RI 44 0 NA 7126 breast stage iiib t4b n1b m0 female 1992 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 5 1 2 3 NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 10.2950444 10.0357083 12.3519519 9.7198618 8.5434394 9.2143237 10.7940554 9.5048980 10.7126717 13.5804467 9.9929753 10.1918275 1.6892097 12.3300721 2.5371967 9.9819763 5.8429989 8.4757910 7.7093410 13.1252814 2.7595820 14.1872709 4.7423081 9.7489717 11.4860453 4.3445445 NA 11.1872459 9.7888054 2.2741424 7.0002615 7.9141609 1.6892097 2.6891873 10.0254779 10.3882464 8.7488094 12.7766574 9.9727459 11.5956342 1.3672592 11.7222045 15.0263704 9.4125415 9.8348720 11.2234974 11.0892201 4.9819759 1.9522217 8.8440127 12.5487294 -0.6326289 11.4303244 7.3272688 5.6151926 5.2861308 9.7830082 11.8295131 10.6352236 12.4508289 13.0813510 8.5755007 10.9639222 10.2950000 11.4527389 11.4827979 4.5570914 12.4146460 12.4207682 NA 10.6419359 8.9681086 3.6186028 5.7248194 10.3924061 10.5481080 10.7482686 9.1754263 2.0677075 10.1288177 14.0233840 11.3436516 10.4623338 9.5157430 0.0097140 0.7717400 0.7717400 -0.0196020 -0.0196020 -0.0220720 -0.0190530 -0.0230750 -0.0230750 -0.0081760 -0.0081760 -0.0081760 0.0000000 0.0034551 -0.0128650 -0.0128650 -0.0128650 -0.8013700 -0.0102460 0.0157130 0.0016507 0.0151970 -0.7810900 0.0215900 -0.0022304 0.0148750 0.0148750 0.0148750 0.0696550 0.0097140 0.0097140 0.0279050 -0.0196020 -0.0220720 -0.0327820 -0.0190530 -0.0190530 -0.0087281 -0.0230750 -0.0230750 0.1503800 0.1503800 -0.0081760 -0.0034763 -0.0034763 -0.0034763 0.0187890 0.0034551 0.0034551 -0.0128650 -0.0128650 -0.0128650 -0.0128650 -0.8013700 -0.0102460 -0.0102460 0.0157130 0.0016507 0.0157130 -0.6194300 -0.7837100 0.0215900 -0.0077617 0.0148750 0.0148750 0.0520850 0.0052612 0.0469700 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 8.69818340 14.58738025 8.53468457 9.76654448 2.61520440 10.70767300 -1.63262893 -0.63262893 8.69930315 8.80085202 -0.04781556 7.69133455 1.68920969 10.13420939 9.29430369 3.49655183 6.43872866 8.82053704 10.35524096 10.26246299 9.46990490 7.75743535 10.13006379 3.35094979 8.89474351 10.49848036 7.61519410 -1.63262893 10.43234594 1.95222173 13.39629482 12.37901786 7.52965778 10.08065300 8.29948142 9.28090390 4.43335342 2.82670101 1.17459817 6.07462531 8.55955911 10.07462558 8.89572068 3.01111989 8.22236843 6.28612893 9.56693880 5.46529865 10.06249480 -1.63262893 9.48490967 3.45472864 3.36727321 9.72393854 6.19292401 1.53719665 8.99388802 6.91801287 7.20331668 5.02547624 13.72234222 NA 10.39724379 NA 9.24301590 2.82670101 7.80605849 8.23917174 13.395000 5.355950 8.495261 12.330072 10.582799 10.560484 13.125281 12.870720 9.629949 10.013825 13.020447 10.287247 8.844013 9.542816 1.537197 7.566939 11.383204 11.263599 7.132138 9.084943 8.660738 9.239172 9.990650 6.406186 6.168167 9.992975 6.422549 1.537197 6.200157 7.620594 12.270207 10.177035 9.378494 8.652669 13.618157 2.952222 11.560247 8.748809 10.394827 9.963922 11.293562 9.825673 10.754207 9.847552 -1.632629 9.101002 3.496552 11.430324 8.208045 10.429987 9.783008 7.262085 13.555198 10.210795 9.607461 13.224567 10.907879 9.673898 1.174598 TCGA-B6-A0RL 60 1 2469 NA breast stage iia t2 n0 (i-) m0 female 1993 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 1 1 2 3 1 1 1 4 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5253703 9.5439240 12.0613193 8.7641059 9.0907233 8.1989174 10.3629554 9.2861134 7.7569412 13.3432284 12.6690895 10.3333273 1.1068843 13.7491281 2.5474992 8.9434165 6.4543783 8.5849625 5.5283775 13.5133480 -0.1154412 15.1829911 -0.1154412 9.4346090 11.2639011 5.5283775 1.2995377 4.4288459 10.3646397 5.3548435 8.5895792 5.2882441 3.0000000 0.2995963 9.7440576 9.8618026 9.7559147 10.5346770 10.1706955 11.1966494 4.4893824 11.7175446 14.0103936 6.8160480 9.8924844 11.9715436 11.1898246 3.3870178 2.8845198 8.6789388 10.2581130 -1.7004037 9.6388536 3.6918803 3.2995670 4.4080868 9.7163579 12.2778239 10.9467939 10.7226762 14.6581771 8.4249737 10.9147301 10.6110248 11.3350467 11.1344263 5.2868811 11.2374857 12.8156296 0.2995963 10.6041968 9.3009684 4.1362406 3.2537624 10.1745416 9.5924570 10.7831241 9.7041696 NA 5.3763772 11.1344263 9.4619517 10.6502232 9.8769891 -0.5452000 0.4901200 0.5198300 0.0000000 0.0000000 -0.2519800 0.0405020 0.0037803 0.0037803 3.6569000 3.3137000 0.0362640 0.0192570 0.3243500 0.0117130 3.6569000 3.6569000 0.0019756 0.0019756 -0.8377500 -0.2680200 0.0255820 0.0717130 0.0717130 0.0717130 -0.9022700 0.0271100 0.0271100 0.9396100 -0.5200700 -0.5452000 -0.8033300 0.0000000 -0.2781400 -0.2519800 0.0253750 0.0253750 0.0037803 0.0037803 0.0386640 0.0080906 0.0259860 -0.9521000 0.0044749 0.0044749 -0.3673400 0.0233200 -0.6139100 -0.9025700 0.0209370 -0.9367200 -0.9223200 -0.9223200 0.0019756 -0.0030023 0.0117130 -0.8410000 -0.2680200 0.0257050 -0.8957100 -0.9164200 0.0717130 -0.1874500 -0.8786600 0.0271100 -0.9206800 -0.0418050 -0.8823100 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.427 -0.105 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.427 -0.105 5.5941813 8.7722512 8.4694851 8.3548426 2.6918691 11.6262707 -0.1154412 NA 8.9657843 7.0103670 -0.7004037 5.7507726 1.1068843 10.2038185 8.8882751 6.5427347 5.8769884 9.0980321 7.8348357 10.8788762 9.6485152 7.9719855 6.7174132 0.2995963 9.5838060 9.2846906 -1.7004037 1.1068843 10.7386120 3.4288392 11.4727689 11.8082216 2.6918691 9.8802899 8.7226761 9.9452188 3.1069178 -0.7004037 1.1068843 6.3923174 8.1261087 9.0619422 9.8348357 NA 7.6032042 8.2566625 9.9528532 4.6571140 9.8637098 0.2995963 9.2639011 -0.1154412 3.2537624 10.2658711 7.1389527 -0.1154412 9.3622809 4.3219281 4.4694823 2.7589853 13.7220193 -1.7004037 10.5147899 NA 5.7089514 1.7589853 8.4080847 8.5029082 16.950071 7.017237 8.047753 13.749128 9.318456 10.977500 13.513348 12.484591 11.306796 10.637461 12.609747 10.332295 8.678939 8.209453 1.621478 7.777318 12.801895 11.857263 7.135611 8.439112 10.205699 9.755401 11.095525 3.914268 8.929827 12.669089 8.643856 NA 5.899473 8.429024 11.072287 9.152870 8.972869 10.032152 11.643440 2.000000 11.912817 9.755915 10.290728 9.707359 11.881467 10.085013 11.080100 8.209453 1.106884 8.489842 1.758985 9.638854 1.758985 11.417690 9.716358 7.989715 13.234858 10.082968 9.273975 12.229004 9.802392 10.435911 -1.700404 TCGA-B6-A0RM 57 1 2373 NA breast stage x tx nx mx female 1993 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 3 1 2 3 3 1 1 1 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2990904 9.2966974 11.7982580 8.9077692 8.4645805 8.6659054 10.9890691 9.0155054 8.7169151 12.9766018 8.2052371 10.5162354 2.7992531 11.4937766 3.0008834 9.2463278 6.1915627 8.5634526 10.2483932 13.3770982 4.0319068 14.3383549 3.8348730 10.0864583 11.9375164 4.4545971 0.7992531 7.5698359 9.0641561 -1.5228408 8.7487795 4.4996865 1.2846918 5.3352974 9.5312424 9.8227217 10.0179289 11.6289673 9.5278455 11.1361973 12.2410476 12.2803376 14.4223487 6.9878040 10.1655668 11.8101922 10.6456752 3.5647806 1.7992531 8.8216123 10.4198310 NA 10.1941359 8.0261383 4.7252449 3.2846770 9.9119447 11.8978031 10.2717323 11.5408801 12.7511121 7.9811420 10.6609519 10.6625017 11.1616268 11.2635861 4.7992428 11.5882891 12.6958040 -1.5228408 10.3781833 10.0744379 3.0628816 4.2052361 11.6149481 10.6940624 10.4326031 10.4542385 2.1777584 5.3102056 11.8075331 11.6939108 9.7264299 9.6928495 -0.00138580 -0.00138580 -0.00346270 0.01296500 -0.00904320 -0.00678130 -0.00620670 -0.00576590 -0.00576590 2.31150000 2.31150000 3.11840000 0.01140000 0.00958830 0.00013863 0.00013863 0.00013863 0.00388540 -0.00242410 -0.00733390 0.01126100 0.02398700 0.03495900 0.03495900 0.03495900 0.04542400 0.04542400 0.04542400 0.02230400 0.02595200 -0.00138580 0.00000000 0.01296500 -0.00678130 -0.01711600 -0.00620670 -0.00620670 0.01768400 -0.00576590 0.00388540 0.01405100 0.00097064 -0.93652000 -0.00699890 -0.00699890 0.00458000 0.02904400 0.00958830 0.00958830 0.00013863 0.00013863 0.00013863 0.00013863 0.00388540 -0.00242410 -0.00242410 -0.00733390 0.01126100 0.01697900 -0.92786000 0.03495900 0.03495900 0.00776650 0.04542400 0.04542400 0.00842560 0.01242200 0.04230700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.198 3.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.198 3.118 0.000 0.000 0.000 0.000 6.8171666 11.8550693 8.7992447 8.9316157 3.7847448 10.0832589 1.0622599 -1.5228408 8.6384482 3.7992428 NA 5.4885439 3.5647806 10.3298460 9.2644027 3.3352974 7.6065992 9.0232462 11.4019435 11.1627223 9.2408276 7.3259395 9.0911058 1.3010608 10.6928495 9.6671410 4.4315160 NA 10.8121484 3.1777584 13.1473641 11.8848498 8.3086239 10.1408746 6.9489921 9.3243739 2.8696346 0.4773665 -1.5228408 0.4773665 9.7563467 9.7335252 10.3687204 3.8348730 7.4463001 7.7252442 10.8199467 6.6769895 9.4574560 NA 11.2588811 2.3842156 5.4198321 9.4233017 6.0586672 2.5647684 8.9510221 8.3961796 6.7810974 -1.5228408 14.0053737 9.7534409 10.2149864 -1.5228408 8.1030255 4.5434031 7.6014380 7.5189757 13.976363 3.969169 8.523076 11.493777 10.025175 10.047647 13.377098 12.982384 9.233039 10.442379 12.292199 11.178406 8.821612 6.753441 3.834873 7.445983 11.236581 10.889092 8.879263 9.030946 9.873921 8.782238 10.759148 5.521710 8.659711 8.205237 6.748779 1.936742 7.451731 6.676449 8.189843 9.748780 10.804027 9.006747 10.352682 4.092030 11.573612 10.017929 10.599821 10.120271 12.150736 9.062279 10.404354 9.027101 5.121173 9.325900 4.000874 10.194136 6.359960 10.736177 9.911945 7.124955 13.637424 10.244673 10.657226 12.587229 10.148415 10.100283 1.062260 TCGA-B6-A0RN 60 0 NA 8008 breast stage ia t1c n0 (i-) m0 female 1993 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 3 2 4 1 4 3 1 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 3.81477e-07 10.1947869 9.4535968 11.8450677 8.5075743 8.3869256 8.6809368 10.6992512 9.7975255 9.8048404 9.4115277 11.7013906 10.1856462 0.3029916 12.9421177 3.6722330 8.8842038 7.4561326 8.1189203 9.9635933 13.2771787 NA 14.5393164 6.6428532 9.6634845 10.5783517 6.6838256 NA 9.6301741 7.9226118 1.8879541 8.1856461 7.4695848 NA 3.0399631 9.5398147 10.1092843 10.2440508 11.9052381 10.0126614 10.5857055 4.6249314 11.5219699 14.3001238 6.0866352 11.0467156 11.3432929 10.9967805 4.6953202 3.4184868 8.6736907 10.6132372 -1.2820878 11.1025547 7.1103580 4.6006860 3.4729296 10.4535967 12.1543618 10.7466374 12.1751650 12.7683145 8.7881617 11.2540450 10.8490262 11.3614460 10.6395098 4.4459584 12.6007792 12.1774723 -0.2819124 10.0662156 8.9189392 3.1137838 3.9659689 11.3191150 9.7500864 9.8753877 9.9414391 1.3029916 9.5221717 12.4859147 12.3306788 10.1210527 10.1443054 1.01660000 1.47230000 1.47230000 -0.00678130 -0.00678130 -0.00857660 -0.01059000 -0.01243800 -0.01243800 -0.00314320 -0.00314320 0.00055459 0.00631800 0.00631800 0.00476210 0.00476210 0.00476210 -0.00567570 -0.00567570 -0.00498440 -0.01058100 0.02006300 0.02946300 0.02946300 0.02946300 0.04160000 0.04160000 0.02606800 0.02890300 0.01754400 -0.01133500 -0.01316200 -0.00678130 -0.00857660 -0.01092200 -0.01059000 -0.01059000 -0.66726000 -0.01243800 -0.01243800 -0.00027724 0.00000000 -0.00314320 0.00339510 0.00339510 0.00339510 0.03270400 0.02034300 0.02034300 0.00476210 0.00476210 0.00476210 0.02653000 -0.00567570 -0.00567570 0.05124500 -0.00498440 -0.00344300 0.02006300 -0.84623000 0.02946300 0.02946300 0.01153900 0.04160000 0.03576200 0.02890300 -0.00228440 -0.81786000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.027 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.027 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4895301 13.5958520 8.7948564 9.7445641 3.3618947 10.9229174 1.7180437 NA 8.8265650 7.6309303 NA 8.7417949 2.3029916 10.2897933 8.8842038 0.7179999 7.8473236 9.4895301 10.4049789 10.3695409 9.7475281 6.9659678 9.9606194 1.3029916 9.8213285 9.2562297 0.3029916 NA 10.4417016 3.0399631 13.0511261 12.0990428 7.8626987 10.2973566 7.0799850 9.2138957 4.0034403 0.3029916 0.7179999 4.7624339 9.0887281 9.7848027 10.2278157 4.0034403 7.7337068 6.0930805 10.6476690 7.7569599 9.6406251 NA 10.2018564 2.7180437 3.8879639 10.2378194 7.0039518 4.7624339 9.5067590 6.0667695 7.2258350 NA 14.3226808 -0.2819124 9.8954602 NA 8.8068290 4.6006860 8.1774724 8.3798189 12.5759245 4.1443075 8.1836071 12.9421177 9.8696915 10.9618097 13.2771787 12.0149569 9.2036385 10.5374215 13.7817728 10.2376769 8.6736907 10.4365735 -0.2819124 7.3798185 10.9444529 11.246006 7.937209 9.012661 9.703171 6.937209 10.808881 5.225834 4.241604 11.701391 7.984827 6.525396 8.467910 3.707635 11.991691 10.058447 7.343750 8.582227 11.783625 4.672239 11.177024 10.244051 10.533824 9.668597 7.776032 8.558819 10.507982 9.296413 1.525417 8.964615 5.287897 11.102555 7.689584 10.420646 10.453597 7.383377 14.686415 10.097419 10.756617 12.836333 10.811458 9.734849 1.887954 TCGA-B6-A0RO 71 0 NA 4929 breast stage iiib t4 n1a m0 female 1993 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 5 3 1 1 2 2 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 9.1811175 9.4076451 10.8614638 9.1265839 8.4508257 9.4044651 10.1165140 10.8359619 9.0234045 14.9573055 11.2950501 10.9909125 6.0067266 13.2062613 2.1654296 9.4489751 3.8732423 7.9380128 10.2090889 12.9942477 6.7261391 13.2870866 5.3774743 9.0379897 10.2368860 10.6357435 0.5804350 8.4495923 11.3431753 NA 6.8169542 6.7138607 -0.7415414 2.7179560 10.1627914 10.7847877 10.2243173 9.5668720 9.9252009 10.7715203 13.3461616 10.5545889 13.5132664 6.4270044 8.8969690 10.8996816 11.1618500 3.3878174 1.7179560 8.6626100 11.0846842 NA 11.4206096 3.9309549 3.2127250 4.2585340 11.3241175 11.4708774 9.9243131 11.3083816 12.6311260 9.1188440 11.2392081 11.5621711 11.3529407 9.9437198 4.3878174 11.7454937 10.2933320 NA 9.6599460 8.1951709 4.0661495 4.1654216 10.7862544 10.0699077 9.3903900 9.8727828 2.4284640 9.4365754 11.7047117 10.4047835 9.8458417 8.3993630 -0.4401700 0.4326000 0.3984800 0.0059700 -0.0008316 0.0550880 -0.0023553 0.2864200 -0.4418300 -0.0069195 -0.0069195 -0.0070576 0.4132900 0.4339500 -0.0079063 -0.0079063 -0.0063413 0.4334400 0.4334400 0.4198200 0.4339500 -0.0087146 -0.0059522 -0.0059522 -0.0059522 -0.4147600 -0.1208200 -0.0023883 0.4255300 0.0015778 -0.4401700 0.0000000 -0.4452300 0.0600790 0.0550880 -0.0023553 -0.0023553 -0.1840800 -0.4326800 -0.4738400 -0.0181890 -0.0033243 -0.9224900 -0.4448000 -0.4448000 -0.4483500 -0.4500700 0.4339500 0.4339500 -0.0094046 -0.0079063 -0.4559700 -0.0178030 0.4334400 0.4323000 0.4323000 0.4198200 0.4339500 -0.4516800 0.4621200 -0.0059522 -0.0059522 0.3921400 -0.4272400 -0.0023883 0.4349600 0.3880000 -0.4674900 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.320 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 0.000 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.320 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 0.000 6.8769184 11.5206279 5.7976926 9.5731162 0.5804350 10.3400164 0.5804350 -0.7415414 8.6721608 7.6270392 0.2585792 6.9415277 0.2585792 10.6554053 8.3499685 -0.7415414 6.5623142 9.8992299 8.5462455 11.9004719 10.4450373 7.1258123 9.2753414 2.1654296 8.5064607 8.9424048 5.2919571 -1.7413002 9.8131219 2.7179560 12.4680625 12.2982232 6.9059910 10.4174583 7.8169536 9.6905529 5.2010457 -1.7413002 -1.7413002 10.3303305 9.9095847 10.3874939 11.3987237 5.0787123 9.1698351 9.2662611 10.6766491 6.8805851 9.8434956 NA 11.1234929 1.4284640 2.9589726 10.3117327 5.7549463 NA 9.1134015 6.2300762 11.2572997 NA 13.2874751 -0.7415414 11.3881380 NA 8.3722752 3.3029331 8.8704800 10.8366698 12.435407 5.091425 8.795751 13.206261 10.147657 11.066693 12.994248 11.897308 8.920311 11.020707 13.383745 9.154865 8.662610 9.691597 1.717956 7.195171 13.818926 10.0472514 6.6721608 8.9397714 9.3293248 7.2528868 9.6608310 4.3878174 9.7712735 11.2950501 5.3565664 -0.1564985 3.1654296 8.0073463 9.1032388 8.9023893 9.0969491 8.3852373 12.0382524 2.7179560 9.7105838 10.2243173 10.7680606 9.3787708 10.5085353 8.7840537 9.7169396 9.0175890 NA 8.9183594 2.9589726 11.4206096 4.8878908 8.9005846 11.3241175 7.1892701 13.3132221 10.8766891 10.6089197 12.8688081 9.7332530 8.2127293 0.5804350 TCGA-B6-A0RP 73 1 3126 NA breast stage iiib t2 n1b m0 female 1994 NA no mixed histology (please specify) 2 white not hispanic or latino 5 5 3 3 3 1 1 1 4 4 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 10.3771761 9.6093241 11.7809057 9.9257010 8.7704617 9.2189366 10.8101703 9.6683032 9.7594615 12.8839217 9.1821602 10.4954665 -0.2087277 13.2043736 3.7609022 10.1381577 7.4518647 8.4542397 9.5276766 13.5097362 -0.2087277 14.1532641 7.7723660 9.7221697 10.9235601 2.9611973 -1.7938569 11.6908834 11.1416614 2.7298790 7.5439343 6.6241652 -1.7938569 4.2286802 9.5671592 10.0200934 10.6618963 10.4297106 10.1935761 11.6854609 -0.7936068 10.6254823 14.5856228 7.5156297 9.6225819 12.1729077 11.4204795 4.2063150 0.7912723 9.2670081 11.6477002 -0.2087277 11.3721613 5.6157017 6.5813512 4.9744972 10.0843630 11.5848780 10.4315196 11.4802534 12.9568621 8.3420213 10.7790124 10.7415681 11.4409799 10.9580654 4.9205553 11.9488321 9.8980556 NA 10.3359172 9.4114945 3.4568981 5.7061575 10.9361453 9.4381333 10.2527541 10.0908643 2.9067559 9.4911362 12.8567469 13.0096865 10.0304754 9.7401285 0.5068900 0.9721100 1.0375000 0.3524700 0.3409900 0.0000000 -0.3628300 -0.0038779 -0.0115830 0.3775900 0.3775900 0.3502300 0.0136320 0.0136320 -0.0063668 -0.0161470 -0.0161470 -0.3524800 -0.3524800 -0.7265000 0.0118410 -0.3376800 0.0150280 0.0150280 0.0175440 0.0104240 0.0104240 0.0104240 0.0370760 -0.3424000 -0.3508800 0.0227250 0.3592000 0.0000000 0.0000000 -0.3628300 -0.3628300 -0.0038779 -0.0014621 0.0237660 0.0056955 0.0018902 0.3775900 -0.3526600 -0.3493900 -0.3493900 -0.3493900 0.0136320 0.0136320 -0.0063668 -0.0161470 -0.0161470 0.0155870 -0.3524800 -0.3535300 -0.3535300 -0.7265000 0.0118410 -0.3376800 -0.7173700 0.0150280 0.0150280 -0.3441200 -0.0044312 0.0104240 0.0370760 -0.3390600 -0.3262300 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.029 -0.717 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.342 0.630 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.029 -0.717 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.342 0.630 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 0.000 9.0774473 13.9697839 3.6325823 9.6575234 2.9067559 10.7813786 1.3762348 -1.7938569 8.3924265 8.8347577 NA 7.8156939 3.2063150 9.8265320 9.5627641 1.0136409 7.8465573 9.4285034 12.2219885 10.0685621 9.7509047 7.6492555 10.9798635 3.6657452 10.4227549 9.6891200 1.7912723 NA 10.7761677 3.0136588 12.9027907 11.8307649 8.0439399 10.5397471 8.7532067 9.2154410 3.6657452 0.7912723 NA 3.5282462 8.6554610 9.4035289 11.0116530 3.6657452 7.5939849 6.3661841 10.6419824 7.1517563 9.5808084 NA 13.3451439 4.9744972 5.9342334 9.9579902 5.9387163 4.3355976 8.7968991 8.2924482 5.6657424 -1.7938569 13.2774393 0.2062681 10.0545438 NA 9.0392023 4.9477784 7.6093243 8.5769997 12.5608253 3.6981629 8.8329337 13.2043736 9.5648590 10.7136113 13.5097362 12.1480934 9.0510180 10.8438427 13.6501946 10.4166791 9.2670081 9.1266650 0.7912723 7.8663078 11.2772716 11.0822534 6.8645242 9.1561390 8.9435595 7.8136427 9.8774463 7.4327239 7.9188394 9.1821602 6.9444040 5.7454713 4.9477784 6.0373668 10.3827970 10.2598987 8.2602379 8.0055937 12.5269717 5.5282400 11.2824497 10.6618963 10.5419816 10.1288965 11.4327244 9.5174928 10.4019920 9.2252077 0.5282712 9.2034917 6.0007279 11.3721613 10.0980959 10.2485290 10.0843630 7.3661832 13.1433181 9.6986661 10.6045214 13.2753843 10.4121054 9.6688144 1.2063306 TCGA-B6-A0RQ 68 1 4273 NA breast stage iib t3 n0 (i-) m0 female 1994 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 2 NA 2 2 3 3 2 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 10.1979173 9.5880239 11.5277332 8.9639440 8.5492048 8.9386804 10.3731561 9.6980446 11.1883794 13.6141189 10.7175391 10.9416356 3.0632958 13.0996780 3.3084191 11.0446039 7.4883222 9.5722693 10.4820905 12.3078849 5.3745040 12.6246949 7.8102503 9.8647708 10.6888744 5.7262672 NA 7.7367733 8.3487029 1.8933622 8.4389839 8.1189852 NA 3.1663941 9.6785558 9.7811043 10.1546872 11.2124834 9.8961909 11.2443150 9.3711341 11.2930098 14.8975817 7.8483669 9.6070488 11.5373823 11.1710507 5.2626098 4.2153058 8.9486584 13.3973672 -0.6915226 11.2956773 4.6121932 6.3140385 3.3528009 10.1979173 11.9598014 10.4717486 12.8126116 12.8322203 8.0566063 11.1181815 10.9387328 11.0454494 11.4610151 4.5178678 11.2898023 11.4446035 NA 10.4399489 8.9887730 4.1415554 2.6303356 10.9251919 10.3565596 10.1377397 9.3013517 5.0226608 10.1257968 13.1778144 12.5532975 10.0295125 10.0118844 0.09647000 0.09647000 0.31033000 0.00000000 -0.00228020 0.00555290 0.00235810 -0.07000100 -0.07000100 0.00235810 0.00235810 0.00235810 0.00055459 -0.00124730 0.00041593 0.00041593 0.00041593 0.00246870 0.00246870 -0.15080000 -0.09683600 -0.00221680 -0.04183800 -0.04183800 -0.04183800 -0.00572660 -0.00180140 -0.00693280 -0.00498440 0.09647000 0.09647000 -0.00235530 0.00055459 0.00555290 0.00555290 0.00235810 0.00235810 -0.07000100 -0.07000100 -0.03354100 0.00171690 0.00277450 0.00235810 0.00124810 -0.00165720 -0.00165720 -0.00165720 -0.00124730 -0.00124730 -0.00318590 0.00041593 0.00041593 0.00041593 0.00246870 -0.00180140 -0.00180140 -0.15080000 -0.09683600 -0.00221680 -0.15592000 -0.04183800 -0.04183800 0.00166420 -0.00572660 -0.00693280 -0.00498440 0.00305220 -0.00719580 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.7922294 11.7873093 7.1221944 10.2846194 3.6303472 11.6275209 -0.1065601 3.2626136 8.8990004 9.6659653 1.3084191 7.6053299 4.6659669 9.5300005 9.1173777 2.0088454 8.6493762 9.9643913 10.6554810 10.4080899 9.4907767 8.0749421 10.7624555 2.3084191 10.0452380 10.3898968 5.8630018 NA 10.4208529 6.0498812 13.7678450 12.1805110 7.6637644 10.7554966 8.0897730 9.0183588 6.2856926 0.8933622 1.8933622 1.1157657 8.9203603 9.8461172 9.2885528 7.2970979 9.0018656 6.7841467 10.3514406 5.7092934 9.9198993 1.7678243 12.1139557 2.0088454 4.9949146 9.7833461 6.0661043 3.6659612 8.7304783 7.1381356 6.4733210 -0.6915226 14.5789277 0.3083609 10.9527203 NA 8.1044530 6.2032305 7.7304783 8.3677576 12.4342369 3.5938199 8.5444274 13.0996780 10.2917633 10.4660761 12.3078849 12.4387426 9.2792382 10.5716826 12.8543431 11.0378217 8.9486584 8.1413035 -0.6915226 7.6942757 10.4389839 10.9617063 6.8591595 9.0045115 9.0658033 7.3196405 10.0558805 5.4982381 6.6121947 10.7175391 5.5752004 6.0498812 9.5833739 4.4901144 11.9647265 10.2523933 8.4143220 9.1003901 11.2885529 4.7346771 11.0608672 10.1546872 10.4527529 9.8947841 11.7646394 10.5527772 10.5444275 9.3370101 1.1157657 9.4366333 6.0226585 11.2956773 3.9808388 11.0930482 10.1979173 6.9949134 14.8822824 10.0979470 10.6334377 12.9369728 10.4622820 9.7140866 -0.6915226 TCGA-B6-A0RS 38 1 3063 NA breast stage iia t2 n0 (i-) m0 female 1988 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 4 5 NA NA 2 6 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.305814 9.235784 10.862193 8.258269 8.891017 9.239556 10.317995 9.581980 12.043140 13.176468 11.071349 10.143783 2.423901 14.144688 1.795850 10.176025 6.091315 7.960309 12.775869 12.713570 4.194410 12.220026 10.137328 9.335321 10.872675 5.649311 1.336455 10.453412 9.827279 3.795860 9.054104 6.375347 7.486175 4.621829 10.118607 10.629037 9.187396 10.440043 10.394758 10.709293 6.444952 8.409230 15.155609 5.608919 8.042060 10.394081 10.465066 3.194402 NA 9.646472 10.270487 NA 10.508230 5.064348 6.626446 6.036868 10.423227 11.623563 10.475659 11.563442 13.008632 7.923267 10.397461 9.649571 11.103371 10.274169 3.693978 12.649736 9.450170 -1.663374 10.130437 9.066048 2.340933 5.064348 10.935178 10.338539 10.036000 10.062646 3.194402 9.870731 14.785963 12.473018 9.806069 9.391710 -0.1917000 1.0076000 0.5912200 0.3209600 0.6950800 0.5154700 -0.0166640 0.7984500 0.1434400 -0.0021763 -0.0021763 0.5470500 0.5350800 0.5368300 0.1742700 0.1483700 0.1865100 0.2236500 -0.0631270 0.5121600 0.5475800 -0.1669700 0.1646400 0.1424000 0.1626900 -0.2228300 0.1931900 0.2473600 -0.1493500 -0.5326300 -0.1918300 -0.3606400 -0.5414600 -0.5662900 -0.3913700 -0.5712700 -0.5637300 0.7984500 -0.0132240 -1.2929000 -0.1893200 -0.5865400 -0.7342200 1.4016000 0.7761900 -0.6433700 0.5562500 -0.1521200 0.4994800 -0.3485500 0.1483700 -0.4966000 0.4078200 0.0923570 -0.0541110 -0.0390820 0.1489500 0.1857500 -0.5192500 -0.5536400 -0.5553400 0.1424000 -0.6114000 -0.2228300 0.8895200 -0.2592300 -0.1920800 -0.5427500 -0.152 -0.152 0.174 0.174 0.000 0.000 0.149 0.186 -0.224 0.211 0.211 -0.555 -0.413 -0.552 -0.552 0.000 0.193 -0.192 0.550 -0.259 -0.149 -0.158 0.197 0.000 0.000 0.159 0.159 -0.533 0.000 0.000 -0.549 0.000 0.000 -0.025 -0.025 -0.279 -0.137 0.776 0.607 0.000 0.000 -0.152 -0.152 0.174 0.174 0.000 0.000 0.149 0.186 -0.224 0.211 0.211 -0.555 -0.413 -0.552 -0.552 0.000 0.193 -0.192 0.550 -0.259 -0.149 -0.158 0.197 0.000 0.000 0.159 0.159 -0.533 0.000 0.000 -0.549 0.000 0.000 -0.025 -0.025 -0.279 -0.137 0.776 0.607 0.000 0.000 8.2789424 13.5292984 9.7798892 8.4644220 3.2433187 10.3967859 0.6583715 2.2433035 8.8292822 9.1453919 -1.6633738 8.5859559 9.0255521 11.2627237 8.9694228 3.6939775 8.3615670 9.0778945 11.6334872 10.3974613 8.8699522 6.7668800 11.3129918 2.4239008 5.9213911 9.9901685 2.9213982 NA 10.9010535 -0.6636023 13.8209044 12.2270719 7.1597947 9.7715770 8.5088553 11.2798582 2.9213982 1.6583715 NA 1.1437852 9.0677468 9.7341023 11.6514357 3.1437852 8.4436576 9.2656861 10.1621815 6.7458182 10.0377342 -1.6633738 11.2465082 2.3364262 3.6583600 9.8357703 5.2931829 6.2789419 8.7005625 8.1787779 7.5336443 6.1243302 14.0091569 -1.6633738 10.1653575 2.4239008 9.7054796 3.5063480 7.8162080 9.0437869 13.799576 7.074520 9.332901 14.144688 10.375689 11.454233 12.713570 7.989272 9.348151 10.568249 13.810007 12.124840 9.646472 9.259012 3.091311 7.637924 11.062007 11.762823 6.117786 9.409230 9.642489 7.861949 10.628821 6.745818 4.603217 11.071349 7.760594 NA 6.001764 7.495921 9.469570 10.868784 6.347655 8.654970 8.005312 6.402518 11.289100 9.187396 9.954813 10.449519 7.709293 10.101299 10.946068 8.755334 3.762689 9.123212 7.084620 10.508230 5.994639 11.292292 10.423227 7.040781 14.347742 10.116967 11.130437 12.716144 10.815703 9.913857 1.143785 TCGA-B6-A0RT 39 0 NA 2721 breast stage iiia t3 n1 m0 female 1996 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 2 4 2 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 10.71603532 9.39451629 11.96211037 9.45523515 8.61817367 9.71957569 10.23164433 10.61992347 10.95103222 12.63420660 10.98605135 10.75875113 2.59464409 11.62414335 3.04715446 10.36421500 5.86241172 9.21089680 8.74010117 5.59463812 -0.06839258 10.82472180 7.72608870 9.48089943 10.76377199 5.42352775 -0.06839258 11.34441054 10.84730357 3.47599277 10.11861267 7.62748136 0.66866378 6.17325938 10.32970419 10.31969041 9.35583933 10.80895726 9.97788765 11.62950949 3.39110780 8.34811864 14.73504752 9.10323351 9.37875631 11.12663511 10.11323961 4.72174996 NA 9.50532032 11.12807032 -0.06839258 10.85227411 6.40199389 9.25134535 5.97606801 9.74117336 12.22753770 10.26706346 11.08353531 12.84549752 6.37461699 10.83052638 10.64477607 11.30996797 11.35040420 5.17960261 12.03703605 9.23393119 0.34675837 10.40841934 9.85599079 4.15483431 7.50152911 11.67594636 10.35688900 11.43731930 10.33823252 3.55615961 7.72392096 12.79579478 12.39025063 9.71957569 9.77559415 0.0216420 0.4819900 0.2639900 -0.0112160 -0.0112160 -0.0472960 -0.0136770 0.0265140 0.0265140 0.0759910 0.0759910 0.3738000 0.1584600 0.0037465 -0.0102320 -0.0102320 -0.0102320 -0.0182160 -0.0785440 -0.0483420 0.0223040 -0.0490190 -0.0948540 -0.0019399 -0.0019399 0.0118370 0.0568020 0.0793030 0.0018030 0.0933960 0.0216420 0.0000000 -0.0112160 -0.0357210 -0.0472960 -0.0136770 -0.0136770 0.0265140 0.0265140 0.0265140 0.0594690 0.0594690 0.0167960 0.0387710 0.0387710 0.0387710 0.0387710 0.0037465 -0.1003000 -0.0102320 -0.0102320 -0.0102320 -0.0102320 -0.0511320 -0.0785440 -0.0924130 -0.0483420 0.0223040 -0.0829990 -0.0475310 -0.1048100 -0.0019399 0.1346800 0.0118370 0.0969610 0.0018030 0.0213230 -0.0253460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.5943415 11.8640109 2.4341612 9.0746312 6.9058202 11.1732591 7.5315858 5.9977621 8.9760671 8.4630547 3.8702759 7.5755294 4.6865622 10.4255285 9.8702725 2.6686411 10.7187595 8.8633955 8.4977273 10.0436782 9.3584760 7.7130331 9.8564856 3.8702759 7.6064541 10.2143755 4.2536036 NA 11.4467158 2.1540647 13.1713214 12.0109357 7.6436268 9.7379542 11.5054781 10.2335503 5.2892258 2.6686411 0.3467584 2.2535960 8.9410353 9.5845182 7.3992788 5.8936049 9.2103316 7.1827608 10.0371452 3.9905646 10.0716507 3.4341745 11.7096133 5.0471501 4.1540647 9.5785557 5.6898526 9.2972666 10.3132161 9.8051172 10.4358300 5.2774492 13.3575010 2.9316641 10.5521985 NA 9.8805270 4.3911078 8.4047022 7.8405658 10.1830964 8.6413314 8.6111532 11.6241434 10.7891358 11.0497491 5.5946381 10.5094167 9.0923851 10.9231949 13.9517560 11.9035759 9.5053203 7.3382327 0.9316831 8.1065991 11.5287946 10.622544 3.668641 9.090703 8.580330 7.385629 9.976254 10.345301 8.504057 10.986051 10.805886 3.434174 7.840566 9.068220 11.617298 12.112515 8.296537 8.378757 10.004476 10.433510 11.359426 9.355839 10.913954 10.192593 10.859698 11.302179 10.426529 8.907999 NA 10.263766 10.178809 10.852274 5.641332 10.953116 9.741173 8.488971 13.834205 10.209348 10.661860 12.432266 11.169879 9.277448 5.575530 TCGA-B6-A0RU 40 0 NA 8605 breast stage ia t1c n0 (i-) m0 female 1990 NA yes other specify 0 white not hispanic or latino 4 4 4 5 1 3 2 5 2 6 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 8.323135e-07 2.774378e-07 9.769030 10.025301 11.177820 9.393156 8.184654 8.788262 9.652378 10.504469 11.012968 13.296489 10.429986 10.986973 1.505180 11.755620 3.205611 11.077400 5.634457 8.920915 11.348113 8.469514 NA 10.227127 7.462276 9.279137 10.507989 6.412063 4.149032 10.654603 11.814934 2.827108 7.226272 8.358483 1.090108 4.527540 9.626059 9.603864 9.236493 10.034116 9.396198 11.017420 7.093889 8.086374 15.081953 7.631723 9.896417 10.824281 10.772838 6.654921 1.827087 9.115276 12.659754 NA 10.178924 5.412063 5.399991 3.862729 9.300402 12.347229 10.189045 11.286123 12.656983 6.424037 10.614678 10.722413 10.956385 10.950447 4.845023 12.606575 10.582323 -1.494922 10.165169 9.859974 5.610558 3.714630 9.362377 10.319756 9.732188 10.382074 5.028737 9.082602 12.893662 12.321057 10.754287 9.916685 0.154230 0.154230 0.818780 0.155570 0.155570 -0.362270 -0.322660 0.136980 -0.350900 -0.393220 0.231590 1.645400 -0.261710 -0.373230 0.055902 -0.394230 -0.394230 -0.356320 -0.342770 0.228500 0.177350 -0.281710 -0.341280 -0.341280 -0.341280 0.113990 0.113990 0.549780 0.172070 -0.425520 0.154230 -0.319750 0.155570 -0.362270 0.146630 -0.322660 -0.238420 0.136980 -0.350900 -0.333440 0.061039 0.000000 -0.393220 0.144390 0.144390 -0.412040 -0.025729 -0.725200 -0.367400 -0.400780 -0.394230 -0.298790 -0.190780 -0.356320 -0.354760 -0.422680 -0.360710 0.177350 -0.281710 0.013842 -0.341280 -0.341280 0.605880 -0.406420 0.113990 0.125900 0.202240 0.263680 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 -0.362 0.000 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 -0.362 0.000 7.65237822 12.58823727 5.61369666 10.07834738 2.31251997 12.07716314 -0.49492209 5.53859714 8.87695030 10.94006233 2.67509327 8.00899942 7.65492096 10.21339528 9.32615013 2.20561147 9.14812775 11.58399150 8.98798163 9.32055688 9.21126364 8.30121312 12.05062070 -1.49492209 9.52198177 10.18597256 5.24663990 NA 10.40453042 3.71463019 12.94837610 12.36402875 7.98090672 10.17405856 7.69746665 9.94396541 4.20561147 2.41207694 NA 0.09017595 8.25671773 8.12539332 7.42701443 6.31252904 8.15261391 6.89319109 9.74834751 7.44475236 10.53480584 -0.49492209 14.00803641 3.20561147 5.23309427 9.87581738 7.65684956 3.89749215 9.23734096 7.61630917 5.58198989 3.99703040 13.48070807 0.50517957 10.63477857 0.82708733 8.35692245 6.57126269 8.21425743 8.38475699 10.792886 8.539973 7.579315 11.755620 10.243680 11.880213 8.469514 10.409055 8.863286 10.616841 12.551786 11.752063 9.115276 9.031673 1.827087 7.831603 10.633490 11.223920 4.435909 9.024810 8.932486 8.872588 10.225127 4.771960 6.709744 10.429986 10.441443 5.581990 8.744772 9.383408 14.577160 10.248325 9.084357 8.934580 10.015938 6.059762 8.985600 9.236493 10.612718 9.860525 10.890227 11.852656 10.993014 9.174944 5.286534 9.234284 4.948115 10.178924 8.552298 10.440394 9.300402 7.941885 14.738306 10.011481 10.674472 12.219634 10.270874 9.567220 2.412077 TCGA-B6-A0RV 42 0 NA 4788 breast stage iiia t3 n2 m0 female 1996 NA NA mixed histology (please specify) 5 white not hispanic or latino 2 2 2 6 2 4 3 3 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 4.855162e-07 10.3420568 9.6047923 11.7019352 9.2661442 7.7258332 9.0830503 10.3425049 9.4865107 9.2557139 10.5776420 11.4250044 10.3861928 0.2746493 12.2355896 3.6896570 10.0792912 6.4775624 8.3062089 9.4962095 13.2947342 3.5965536 13.5403351 5.8595845 9.1198093 11.2440089 5.7876910 0.2746493 9.2384819 9.8020993 2.6896570 8.6467621 7.4478833 NA 4.3335168 9.4627992 9.8092495 9.3638522 12.3222007 9.8570781 11.3312601 12.1712071 12.0115880 14.1916836 8.0190302 10.3687000 10.9707205 10.5324031 4.5723016 3.9375892 8.9399582 11.2967590 NA 11.1274120 6.0559830 5.4445478 4.6203987 10.6181783 12.0111653 10.0053756 12.3302438 12.7892542 7.4175800 11.0115880 10.6446777 11.4734766 11.1051376 4.7557475 12.4623868 11.7792759 NA 10.0974587 9.4124674 3.0826685 5.1974526 10.7893365 10.3656169 9.5522973 10.2651992 3.2132228 10.6006773 12.7297783 11.7237710 9.9476369 9.2988386 0.01865300 0.01865300 0.01865300 -0.00194990 -0.01368700 -0.02261600 0.00697050 0.01133900 -0.01722600 3.14580000 0.50671000 0.48870000 0.00498690 0.01365700 0.00817140 0.53238000 0.01921300 -0.47333000 0.00012864 -0.00347270 0.00693350 0.03035500 -0.39631000 -0.44200000 2.69780000 0.04442200 0.04442200 0.04569700 0.03325700 0.06221200 0.01865300 0.04343000 -0.00194990 -0.02261600 -0.02261600 -0.02298700 -0.01505100 0.02229400 -0.01379100 -0.01722600 0.58864000 0.44297000 -0.50516000 0.00000000 0.00000000 0.00000000 0.02622300 0.01365700 0.01365700 0.00817140 0.01529700 -0.48733000 -0.48733000 -0.47333000 -0.00610040 -0.46749000 -0.01396300 0.00693350 0.01160700 -0.52693000 -0.45641000 -0.44200000 0.01041400 0.04442200 -0.39219000 0.04683200 0.00595990 0.06937200 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 0.000 9.1011707 12.4187495 8.6525560 9.0636124 4.1888677 10.6747902 3.0819702 1.2746493 9.3505472 8.1388083 NA 7.5710495 1.2746493 10.0690382 8.9979988 0.2746493 8.9831316 9.4937908 11.3507699 9.3126268 9.4335097 7.7285790 10.0884036 2.0116030 9.7217055 9.7462976 5.0295103 NA 10.1959675 3.6896570 12.6319911 12.3018373 7.9232793 10.4734766 9.7175659 9.4361741 4.9934389 -1.3104325 -1.3104325 2.2746195 8.8073031 9.7604517 10.4026167 6.5034410 7.6075093 7.5257103 10.9036754 7.1201124 9.1895058 -1.3104325 10.5768805 4.5225517 7.0472123 10.0568344 6.7417932 5.8189426 9.3407116 8.5272878 9.3407116 NA 13.8475199 1.4970247 10.0798289 NA 8.6365663 6.1734753 7.7340538 8.1180202 13.694946 5.734054 8.224935 12.235590 10.064156 9.858959 13.294734 12.624549 9.135709 10.124809 12.581823 10.521363 8.939958 8.219091 0.689657 8.907617 11.221285 10.721361 6.296990 9.120112 8.462799 7.678344 10.776108 7.073364 8.329905 11.425004 6.431126 3.497012 8.167418 7.200424 11.638392 10.148066 7.528864 9.104345 11.577452 6.869569 10.237436 9.363852 10.492984 9.790979 10.981118 9.610013 10.438691 8.879484 NA 9.007638 6.829212 11.127412 6.808601 10.503441 10.618178 7.285850 14.388066 10.314455 10.026724 12.143959 11.161843 9.401327 1.689657 TCGA-B6-A0WS 58 1 2965 NA breast stage x t1c nx mx female 1996 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 7 2 2 NA NA NA 1 4 4 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.121176e-07 11.74483270 9.97416202 11.58734680 9.68694675 8.55650146 8.81427547 10.57476371 9.69531704 9.99900724 13.77126693 11.07382873 10.38526309 1.45454442 12.17412852 2.77646198 9.86709569 5.62445187 8.25865695 11.27669823 12.29402485 1.45454442 13.97995484 6.00141945 9.29244542 10.50369368 7.03572617 -0.54540294 9.54725644 9.38156285 1.62442848 9.73819294 8.14626929 NA 4.72131250 9.95387341 10.99295724 9.23013599 10.22312373 10.03006497 11.44090119 1.45454442 11.66016632 14.93147762 7.64610360 10.45979942 11.17177377 11.20460464 3.88079326 0.03941918 9.55781366 11.28127290 -0.54540294 10.96355851 5.34934404 6.78991570 5.12695221 9.71544538 11.40890389 10.39005919 12.35133120 12.87842955 7.08388243 11.63163385 11.32393841 11.22560253 10.99392700 4.26188430 11.87330080 11.50079717 0.45449178 10.59439683 9.33257659 2.45633306 5.71191334 10.65327772 9.79437574 10.27590124 10.60617662 2.15497199 7.12341065 12.26389198 11.77701731 9.56500913 9.22105465 0.00805670 0.00805670 -0.00015220 -0.51455000 0.47632000 -0.00239860 0.00229720 -0.04759300 -0.10900000 1.39120000 3.65690000 0.48544000 0.00083195 0.00287510 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 -0.51290000 -0.46440000 0.00263570 0.43513000 0.00083195 0.00083195 -0.00207840 -0.00207840 -0.00207840 -0.00180140 -0.00078561 0.00805670 -0.00401620 -0.51455000 -0.00744020 0.02076300 0.00499690 0.00499690 -0.03823600 -0.10900000 -0.11196000 0.00958830 0.00000000 -0.52102000 0.00388540 0.00388540 0.00113860 0.00113860 0.00374650 0.00374650 0.00000000 0.00000000 -0.51239000 -0.51692000 0.00000000 -0.00235530 -0.00235530 -0.47997000 -0.46440000 0.00263570 -0.41003000 -0.51197000 0.00083195 0.61879000 -0.00207840 -0.00207840 -0.00180140 0.00444110 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 0.000 10.0196278 13.3789208 5.8032529 9.7691090 5.1321738 10.7012664 2.9780858 NA 8.3808216 8.1073709 -1.5454029 7.6881454 4.8639186 10.5409938 9.1064745 -0.5454029 9.1858447 9.4615531 12.0274628 9.6947209 9.4274769 7.6344350 10.3670410 2.9139521 8.6736942 9.9041904 3.2618768 NA 10.4181444 3.1549720 12.3027575 12.1893412 8.1375204 10.1087143 10.0609310 9.2350655 4.4087254 1.9139521 NA 5.4879493 8.9662785 9.4845031 10.5406620 4.1269481 5.3493440 6.9423655 10.1060261 8.1858447 9.6250768 -1.5454029 10.9608333 3.8120772 4.2618843 9.9586942 5.9047466 6.5152220 10.0906972 8.0014200 9.2069064 0.7764409 13.3275853 0.7764409 10.4360931 NA 8.5953556 5.0692339 7.9077962 8.0710746 14.057254 6.141026 8.802147 12.174129 9.690540 10.254212 12.294025 12.120750 9.108266 11.041366 12.755307 10.734136 9.557814 8.282662 3.312505 7.309394 11.806431 11.201880 7.306275 9.271509 8.832821 9.299232 10.202815 7.591517 9.492759 11.073829 6.420311 3.498915 8.144524 7.681300 10.652050 10.462254 7.928232 8.727156 12.579939 8.012946 11.869223 9.230136 10.302366 9.882362 11.330083 9.934811 10.625390 8.884978 4.583808 9.080855 7.960337 10.963559 7.352371 10.943315 9.715445 7.080234 13.238752 10.225603 9.776454 13.779023 10.605225 9.744545 2.846834 TCGA-B6-A0WT 61 0 NA 5739 breast stage iib t2 n1 m0 female 1995 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 2 3 NA NA 1 1 3 5 NA NA 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 10.6547985 10.4862632 12.1849709 10.3067740 7.8987985 9.1211905 10.5486531 9.9322212 9.5011877 14.3082333 10.5800365 10.9742773 -0.6861737 12.5219176 4.3138336 9.1780219 5.8987985 8.6153317 8.0720586 13.0527724 3.4837642 13.3905678 5.2680338 9.3208630 11.0653797 7.7895689 1.8987888 10.6586864 9.5899601 3.4837642 8.2534150 8.1211905 NA 4.7732685 10.2071372 10.5617632 11.2781765 11.8034328 10.4943665 11.8612122 13.2274731 11.4272523 14.8668349 9.6893638 10.5847150 12.0584593 11.2654847 5.7732685 5.2207246 9.1033694 11.6867007 NA 11.0724753 7.0951955 5.8836917 4.4431159 10.9067598 12.1575605 10.0795361 12.2224159 13.2167760 7.6221748 11.2460504 10.9707789 11.7048107 11.2282208 5.8684250 11.9760590 12.5498499 -0.6861737 10.1316188 9.1872798 2.9012048 4.5232859 10.8171645 10.1941845 10.2694856 10.0142754 3.0142839 9.9202409 12.9673526 10.5729904 10.5771048 9.6867008 -0.00401620 0.61970000 0.61970000 -0.00871460 -0.00871460 0.00083195 0.60828000 0.63280000 0.00332990 3.65690000 1.58510000 0.00638710 -0.67564000 -0.00733390 3.65690000 -0.01326400 -0.01326400 0.00180300 0.00180300 0.08710000 -0.00110870 0.58955000 -0.01780300 -0.01780300 -0.01780300 -0.04251700 -0.04251700 -0.05899000 -0.01574100 -0.00401620 -0.00401620 0.00124810 -0.00871460 0.00083195 0.00083195 0.00569190 0.00569190 0.63280000 0.00332990 -0.66883000 0.00000000 0.00000000 -0.66989000 -0.00691950 -0.00691950 -0.00691950 -0.00691950 -0.65594000 -0.00719580 -0.00713090 -0.01326400 -0.65640000 -0.01312700 0.00180300 0.00180300 0.00180300 -0.00110870 -0.00110870 -0.01064600 -0.15694000 -0.01780300 -0.01780300 -0.00526100 -0.04251700 -0.04251700 -0.67756000 -0.01257600 -0.02767100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.000 8.8096906 13.5873399 9.0211949 9.9267041 4.1568173 11.0502376 -0.6861737 0.8987888 8.2853791 9.1260129 NA 7.7200835 2.3138263 10.2903998 9.0984706 3.5617660 7.1593254 9.6942968 8.8056887 9.7337958 10.1200550 8.4584940 10.3438130 1.6357544 9.9468308 9.7885555 1.8987888 -0.6861737 10.0426066 9.3124260 11.6760535 11.9793936 8.3250630 9.9174620 8.8607301 8.9540805 5.0142749 -0.6861737 0.8987888 4.0142749 8.7040046 9.0125405 9.7598850 2.4837513 8.2873896 5.0142749 10.1679249 5.5992374 9.6221747 NA 10.7168477 3.8373983 7.3472590 9.6407708 6.3719352 6.6625644 8.3609594 7.2504737 8.6888752 -0.6861737 13.1987693 0.3138263 10.4321279 NA 7.8452172 4.5617660 8.4118677 8.4686538 13.5397284 5.7567805 9.0653798 12.5219176 10.8168613 10.8171645 13.0527724 13.2172468 9.4236664 11.2515773 13.0949904 8.9915553 9.1033694 10.2018179 -0.6861737 7.7650467 11.7117776 11.5107451 7.6581315 9.1918866 8.9211661 9.5036602 10.5759482 5.4635832 9.0451546 10.5800365 6.8295350 3.1211978 6.1082505 8.2837977 12.3058889 9.9174620 7.4887616 7.8295356 13.0696621 7.3025201 12.1791417 11.2781765 10.0712257 9.4508267 10.2326989 9.8432663 10.6991588 9.1980061 0.8987888 8.9328634 7.0485457 11.0724753 9.1718165 10.2825025 10.9067598 8.0796357 13.1992337 9.9836066 9.6402652 13.1304194 10.8534792 9.9612941 2.6357544 TCGA-B6-A0WV 67 1 2422 NA breast stage iib t2 n1b m0 female 1995 NA no infiltrating ductal carcinoma 4 white not hispanic or latino 3 1 1 1 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10.2355093 10.6831477 11.6784034 9.9722596 9.0678705 9.8905193 10.2077905 10.2981878 9.0410173 14.5331443 11.3272723 11.0010441 2.0174231 11.8852106 2.3069330 8.2821201 6.2904355 8.5479317 9.7339508 12.9327985 1.1694120 14.1845912 4.0174142 8.9376045 11.4562089 7.2181796 -0.1524841 9.0678705 10.8959790 2.3069330 6.9135812 7.4804873 14.1439064 0.4324250 10.2398095 11.4128322 9.5322406 11.2616488 9.6628754 11.7000215 0.4324250 11.6123636 14.8328003 8.1851584 9.5617376 11.2642896 11.0969018 3.8918858 4.4622029 9.1294221 11.2132677 0.4324250 11.4798057 6.3313075 2.3069330 3.6023737 10.2028432 11.9937425 10.1901223 11.4985437 12.7927530 7.8781595 10.8983610 10.5016806 11.2891394 10.8322665 5.7178573 11.9746803 10.5969425 NA 10.4881889 9.1951133 2.0190258 3.3069184 10.7011915 9.9664331 10.7354742 10.0447087 0.4324250 8.9000601 12.7711909 9.9832013 10.7400349 8.3513178 -0.3182100 0.1776900 0.1776900 0.1001600 0.1001600 -0.1032900 0.3977800 -0.4602500 -0.4602500 0.7058800 0.0485460 0.0693820 -0.0721610 0.1783000 0.2945300 1.6907000 -0.5494500 0.2881800 0.2881800 0.4592200 0.5266000 -0.5419800 0.6446900 -0.5663400 0.7139200 -0.0080784 -0.0080784 0.0108420 1.0306000 -0.3500600 -0.3182100 0.0000000 0.1001600 -0.1032900 -0.1032900 -0.5435100 0.4228400 -0.4602500 -0.4602500 -0.4752200 0.1852500 0.2373600 -0.5943900 -0.5432000 -0.5215400 -0.0223320 -0.0223320 0.1783000 0.1783000 0.2804200 0.1120000 -0.5531700 -0.5531700 0.2881800 0.2881800 0.2881800 -0.4951500 0.4602400 -0.5343900 -0.0008316 -0.5698200 0.1867700 -0.2088300 -0.0080784 -0.0080784 1.0570000 -0.1186100 0.1348000 0.000 0.178 -0.535 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.254 0.254 0.000 0.000 -1.293 -1.293 -0.127 0.000 0.000 0.178 -0.535 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.254 0.254 0.000 0.000 -1.293 -1.293 -0.127 0.000 6.9870434 12.6275191 8.8795379 9.1862284 2.7340484 10.5608786 -1.1526444 NA 8.4877372 7.6740404 1.4324784 6.2904355 3.3069184 10.5396716 9.1626416 0.8475159 7.5304867 10.1973262 9.8147183 10.3537996 9.6356068 8.5287303 9.5074880 0.3585088 7.7543825 9.8219066 1.4324784 3.1694280 10.1851139 2.4324517 11.8845242 11.8322665 6.9560160 9.5591591 6.8809144 9.6288518 7.2737564 0.4324250 0.4324250 5.7423108 9.1772885 8.8432590 10.3363364 3.5479310 9.0621025 7.1873422 9.6032142 5.2568823 10.1328942 NA 11.5898015 1.4324784 4.0174142 10.0476796 7.0836017 NA 8.7633714 5.4622029 7.5199177 1.4324784 13.6799865 -1.1526444 10.7969540 NA 7.6548472 3.1694280 8.7301352 8.3393450 13.925172 6.886411 8.737756 11.885211 9.422086 10.765610 12.932799 12.361220 8.302819 11.109881 12.413308 9.951436 9.129422 8.458517 -1.152644 7.784130 11.841669 10.851010 8.409735 8.946840 8.638655 9.802415 10.286190 3.017423 8.662875 11.327272 4.017414 2.934950 4.017414 8.675597 9.955363 9.876089 10.731983 8.785601 11.178689 2.547943 11.969786 9.532241 10.949468 9.930971 11.278467 8.694549 10.740794 9.196220 1.654848 8.592965 1.432478 11.479806 5.114280 10.193452 10.202843 7.196220 13.151843 10.074506 9.471374 12.689842 10.289399 9.478669 NA TCGA-B6-A0WW 58 1 558 547 breast stage x t2 n1b mx female 1997 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino 3 1 3 2 NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.121176e-07 9.1976256 10.3218769 11.5670394 9.0904957 8.6913998 9.5089105 9.2483479 9.0446919 9.0934981 13.8989236 11.5153618 10.4993207 NA 13.1672222 3.6430365 8.8489409 5.7835169 8.3758978 8.9731388 13.3836608 3.1835977 13.3836608 6.1261201 9.9444165 11.8944115 6.6014573 NA 7.5972332 10.7718513 1.7685866 8.3560324 6.5586442 NA 3.2710670 9.9575684 10.2011095 10.6218771 10.7115707 9.9216974 11.0719678 NA 11.0769066 14.0322769 7.5541184 10.1948323 11.8502729 11.2341340 2.1836135 6.8202300 9.0949971 11.0133278 0.1835818 10.8161460 5.5759234 3.9909639 3.4315294 9.5389562 11.5493807 10.7825880 11.2644226 12.5915367 9.1024684 10.5716224 10.0470170 11.4142260 10.3327171 4.8560296 11.7593807 11.6281024 0.1835818 10.2670844 8.6223971 2.6430481 2.8840508 10.6789605 9.7012744 9.6337854 10.9583921 3.6430365 7.7872313 12.2966961 10.2590843 9.7140114 9.3205961 -0.62411000 1.12920000 1.15710000 -0.64236000 0.01237600 -0.00733390 0.03848900 -0.02109800 -0.02109800 2.75350000 2.10160000 1.75810000 0.03157700 0.04358200 -0.63140000 3.65690000 -0.63443000 0.01251600 0.01251600 -0.64076000 0.28074000 -0.62792000 0.07642200 0.05677600 0.05677600 0.01824300 0.01824300 0.01824300 0.08739000 -0.62411000 -0.62411000 0.04982400 -0.64236000 0.07627900 -0.00733390 0.01153900 0.01153900 -0.02109800 -0.02109800 0.00069863 -0.01358200 0.00180300 -0.62775000 3.65690000 -0.64919000 0.04575000 0.07009900 0.04358200 0.04358200 -0.63140000 0.03863000 -0.63443000 -0.63443000 0.01251600 -0.04849600 0.08103300 -0.65475000 -0.36340000 0.03002900 -0.59993000 0.07642200 0.05677600 -0.63678000 0.01824300 0.01824300 0.07262200 -0.17879000 -0.56773000 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.179 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 0.091 -0.639 -0.639 0.000 0.000 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.179 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 0.091 -0.639 -0.639 0.000 0.000 7.8944116 12.7446543 7.8701058 9.2973473 NA 11.0848491 NA NA 8.3434762 8.6714452 NA 7.8701058 0.1835818 10.7941686 8.6633852 -0.8162912 5.8840459 9.7496591 8.8274612 10.5049695 9.3286711 7.6714448 10.8648435 1.5055353 7.0784230 9.2737175 0.7685866 NA 10.7830531 2.9909549 11.6814569 11.5422563 7.5887469 10.1246527 9.6192754 9.5510199 5.2710670 0.1835818 NA 0.1835818 9.0738695 9.3560326 11.0318368 3.1835977 7.2063062 6.6014573 10.6004026 6.1608859 9.5089105 NA 10.8184162 2.6430481 3.1835977 10.3349769 4.9909594 2.5055353 9.2252643 6.7983150 6.7227638 -0.8162912 13.2550675 NA 10.3900090 NA 6.1836056 5.5234553 8.6056699 8.3257120 14.125206 5.523455 8.459730 13.167222 9.934312 11.262089 13.383661 10.955507 8.436271 10.914924 13.886914 9.215651 9.094997 9.941828 NA 7.388177 11.469585 11.085980 7.312888 8.431533 9.462055 8.549927 10.329906 5.393059 4.643037 11.515362 6.402773 2.768565 4.312890 6.316079 10.310955 10.730982 8.105446 8.019655 11.923597 3.827463 12.076250 10.621877 10.611965 10.025955 11.800154 9.165172 10.838689 8.323157 9.323156 8.629448 3.643037 10.816146 6.848941 10.180785 9.538956 6.827461 12.367861 9.606721 9.837346 12.840030 9.703241 9.558645 1.990955 TCGA-B6-A0WX 40 1 653 NA breast stage iiia t3 n1b m0 female 1998 NA no other specify 9 black or african american not hispanic or latino 4 4 4 5 2 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.282743e-07 2.774378e-07 10.0147727 9.0020243 10.6852889 7.9542917 9.1766840 8.9761843 9.1089394 9.9647320 10.8233359 12.8916677 10.2512991 10.2858934 2.4084945 12.0336867 2.4084945 10.6273224 7.1936022 8.5005017 9.3299156 10.4853153 NA 9.7489858 8.5954984 11.0259069 11.0295050 4.7096711 NA 11.5134728 11.1424835 3.4084945 8.8679314 7.4020451 0.9230351 3.6011498 9.5355728 10.0513251 10.5473201 9.9783554 9.6428039 10.7448469 4.5553438 6.5200073 14.7023409 7.6547993 9.2647030 11.8823504 10.9233547 5.5200073 5.1089384 8.8549924 10.9348592 0.9230351 10.8099888 5.1247086 5.8395490 4.8490735 9.4868413 11.6069448 9.9918512 12.1702884 12.7770062 9.7934377 11.4018425 10.8113260 10.8983477 10.3730470 3.3015876 11.6990124 10.8434258 0.1861202 10.3543616 10.2779835 3.6011498 4.6235099 12.6128089 9.7168388 10.1600438 10.1542941 4.2158572 7.4807280 13.2746195 12.9783554 9.7362128 9.9202524 0.9530900 1.3522000 1.3399000 0.0334450 0.0140220 -0.4669300 0.0030880 0.0205190 0.0126630 0.6440700 0.9204700 0.9134500 0.0199590 0.0265500 -0.4299300 -0.2053200 -0.2053200 0.0058668 0.9416500 -0.4749800 -0.4640600 -0.4692600 0.5152900 0.0235100 0.0235100 0.2623600 0.2907600 -0.4377500 0.0285180 -0.4457400 0.9530900 -0.0328240 -0.4287400 -0.4669300 -0.4669300 -0.4830000 -0.4830000 0.0205190 0.0126630 0.0223400 0.0264670 0.0605450 -0.4743500 0.0244440 0.0244440 0.0244440 -0.4516600 -0.4649100 -0.4649100 -0.4365600 -0.2053200 -0.2053200 -0.2053200 0.0058668 -0.4699000 -0.4699000 -0.4713800 -0.4640600 0.2584400 0.0664090 0.5152900 0.0235100 0.0184190 0.2623600 -0.4377500 -0.3883600 0.8997400 -0.4127500 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.262 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.920 0.000 -0.452 -0.103 -0.103 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.262 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.920 0.000 -0.452 -0.103 -0.103 9.4599029 13.3785543 3.4591299 10.3320395 5.7924519 11.1889223 4.1861043 4.4837900 8.8419360 8.0809252 7.4276933 10.6335350 4.4837900 10.7810539 9.4125195 2.5080229 9.6304320 9.5819984 8.2377692 9.9471045 8.8970401 6.5553407 10.8206159 1.9230731 8.5274406 10.3024512 3.8105973 -1.3989691 10.6829611 2.5080229 13.6626004 12.4743005 7.9913138 9.7451657 8.8081591 9.0564722 5.9230731 -0.3987789 1.1861202 6.0929981 9.0646692 9.2691433 8.9398812 4.3290662 9.4951591 7.4084996 10.9080610 5.9934615 10.5129113 4.2158572 12.9857262 4.2735681 5.5898294 10.6940110 7.4360269 6.3222436 9.4036612 7.1898591 8.6318118 6.0440881 14.2783139 2.4084945 9.9821470 NA 9.2468033 5.6011438 7.8057161 8.0950003 12.166636 6.606769 7.954292 12.033687 9.632501 11.614293 10.485315 10.497477 9.116845 10.675955 13.486937 10.467265 8.854992 9.253093 NA 8.012656 11.483024 10.677292 5.027411 9.896914 8.731715 8.595498 9.854892 7.248603 7.104971 10.251299 9.407694 5.820314 9.989700 7.086008 11.948351 10.670930 7.352689 8.347659 8.540724 7.189859 11.127972 10.547320 10.030028 10.162910 11.949043 10.489888 10.442316 8.171001 5.612373 9.045922 8.116845 10.809989 7.640064 10.289435 9.486841 6.976445 15.201914 9.925325 10.560785 12.203380 11.560422 9.290269 1.923073 TCGA-B6-A0WY 40 1 3461 NA breast stage iiia t3 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 2 1 1 NA NA 3 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 9.65409501 9.66721836 11.45578893 8.84946015 8.52778232 8.97682529 9.52965797 10.09131518 10.30021927 14.25000189 10.94156801 11.02327337 -0.05844292 13.06531225 3.00046880 10.68303504 7.61163422 8.51268872 9.17598635 12.45587116 2.88017613 13.27881826 7.02194160 9.86535113 11.13735033 7.89770209 0.67852268 11.73741831 9.65294820 4.00045979 8.67627764 8.24838920 -0.64340542 4.08452354 9.45792461 10.06482722 9.99820580 11.65007718 9.44340525 10.57879666 8.87427504 10.74919132 15.25853305 6.70559921 10.16275234 11.00136315 11.36240550 5.57577520 3.74892274 9.37619638 12.87581177 NA 11.19816992 5.27546899 5.15102263 4.16395755 10.38796216 11.69742925 10.30861867 12.78070621 12.38666914 8.30204939 10.92051677 10.33745198 10.71278242 10.74084966 4.37897626 12.43875459 11.21594621 NA 10.31189224 9.41595003 4.86249603 4.00045979 11.36608431 10.16113995 10.11898765 9.87967744 4.26349269 9.21458650 12.88499861 12.34768445 9.86885218 9.81449931 -0.20040000 0.06536000 0.06909500 -0.20000000 0.63224000 -0.19750000 0.21852000 0.22037000 -0.20124000 3.65690000 -0.42320000 0.93081000 0.00000000 0.01545400 0.00416320 0.41932000 0.41932000 0.21530000 0.21530000 0.14544000 0.22114000 -0.00027724 0.21484000 0.21484000 0.20804000 0.19162000 0.19162000 -0.22404000 0.60611000 -0.20040000 -0.20040000 -0.00060059 -0.20000000 -0.19750000 -0.19750000 0.22160000 0.22160000 0.22037000 -0.20124000 -0.20124000 -0.19982000 -0.20535000 -0.43659000 -0.12524000 -0.12524000 -0.12524000 0.15562000 0.01545400 0.01894300 0.00430210 0.41932000 -0.20858000 -0.20858000 0.21530000 0.21530000 0.21530000 0.17317000 -0.20871000 -0.44189000 0.21914000 -0.21231000 0.21484000 -0.21601000 -0.21849000 -0.22404000 0.21008000 -0.21664000 0.22653000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 0.000 8.38727249 13.63676008 6.84845895 10.39140450 2.41751500 11.13837504 2.26348518 -0.64340542 8.71745263 8.30204939 -1.64340542 8.29324356 2.81604669 10.51805235 9.36363280 2.94157586 9.16073644 10.09638613 9.72402025 10.34458009 8.94747330 6.80368814 11.41205746 2.81604669 8.67401815 10.24420695 6.66494499 -0.64340542 10.95186306 5.08452779 13.02908613 12.41730149 8.65122645 9.80213779 10.73381604 9.75106816 5.09807420 1.67852268 -0.05844292 0.94155708 8.90735218 9.99549399 9.94532019 5.26349645 8.49772931 7.77656595 10.03564576 6.34528992 9.74354577 -1.64340542 11.48685432 2.60452210 5.64200836 9.34224827 6.24028761 2.88017613 9.58842682 8.28438365 8.33245329 -0.64340542 14.02706817 0.94155708 10.99526770 NA 8.30934674 8.07256729 8.22697038 8.99050905 13.0586158 5.3338852 8.5012640 13.0653123 10.3158831 10.3474186 12.4558712 11.5876767 9.1910765 10.6640910 12.8085893 11.2382931 9.3761964 8.7478492 -0.6434054 7.5854245 10.6919959 11.4243760 6.2453492 8.6431632 9.1231344 7.8036888 10.6706223 6.6603867 8.8977021 10.9415680 7.2300493 2.0570343 8.1510216 7.8112546 12.4050073 9.9335622 9.3474187 9.4327532 11.3841660 5.5464315 10.6044708 9.9982058 11.0618059 10.1223061 10.5994819 10.3513125 10.7878419 9.1346827 -1.6434054 9.2231814 6.3509586 11.1981699 4.9713136 10.7901910 10.3879622 7.0535730 13.9253633 10.1005983 10.3016836 12.9608113 10.5280951 9.3064322 -0.6434054 TCGA-B6-A0WZ 50 0 NA 6292 breast stage ii t2 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 11 black or african american not hispanic or latino 5 5 2 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 5.548757e-07 10.1352015 8.5576494 11.2317313 8.3037328 8.5645622 10.0342390 10.6712064 9.3452697 10.5871421 13.0405745 10.5239989 9.9861363 1.1188248 12.9276876 0.8558303 9.7989239 6.0961374 8.5296621 10.1650720 13.1389693 1.8558303 13.6529171 6.5782897 9.5147486 10.5996477 6.9517475 0.5338623 8.6738811 9.8024370 -0.4661377 7.6450308 7.6810999 NA 3.4407795 9.0004812 9.6580163 10.1023261 12.1912134 9.4340070 11.0045538 11.1139179 12.0161988 14.2968739 7.8574679 10.3817353 10.2203955 10.9102917 4.5338935 3.7038205 7.0574568 11.8720742 NA 11.7920193 2.7818213 3.7038205 2.9262082 9.8030216 11.7673649 10.3380260 12.9947348 13.1956174 8.4437881 10.5314274 9.7460813 11.1058846 10.3805606 3.6213603 12.2735701 10.5676621 0.8558303 10.1582335 8.0807893 3.1224574 3.3412457 9.9758017 9.9029470 9.6772781 9.1113238 3.2343327 10.5871421 13.4167295 12.4259634 10.1009004 9.4902711 0.00221930 -0.00885260 0.57095000 0.00249690 -0.00581400 -0.00951740 -0.00774820 -0.01257600 -0.01257600 -0.00664320 -0.00664320 -0.00664320 -0.00041585 0.00027728 -0.00138580 -0.00138580 -0.00138580 -0.00429290 0.00000000 -0.01285100 0.57416000 0.00110930 -0.61374000 0.00305220 0.00305220 0.43598000 0.43598000 0.43598000 0.00666530 0.00221930 0.00221930 0.52398000 -0.00581400 -0.00166290 -0.01450300 -0.01099800 -0.01099800 -0.01257600 -0.01257600 -0.01257600 0.57309000 0.57309000 -0.00664320 0.36789000 0.36789000 0.36789000 0.36789000 0.00027728 0.00027728 -0.00138580 -0.00138580 -0.00138580 -0.00138580 -0.00429290 0.00000000 0.00000000 -0.01285100 0.57416000 0.00110930 -0.61335000 -0.61316000 0.00305220 -0.01464100 0.42654000 0.43598000 0.00666530 -0.00360110 0.01712400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 0.110 7.7286518 12.5268333 5.8006825 9.0740232 -1.4659384 10.8097285 2.4407928 NA 8.7663159 7.8239136 NA 6.0652772 2.8558303 10.8345335 9.5310744 2.2343480 7.0337412 8.0515646 11.2757832 11.2599002 8.7651883 7.9369070 10.6883967 0.5338623 8.7983377 9.8187191 2.1188580 NA 9.8831762 2.8558303 13.5269218 12.3474758 6.7627142 9.4370236 9.3144348 10.2808291 4.5111770 0.1188913 0.8558303 5.3793853 8.7421292 9.8065248 10.1655267 1.8558303 8.5133344 7.9706064 9.3778161 5.7530643 9.1439972 -1.4659384 10.7705071 -1.4659384 4.3918777 10.3408796 6.7322421 0.8558303 9.7603071 6.9685228 4.9933256 NA 14.1758056 NA 9.8518729 NA 9.7824156 4.7627156 7.6554284 8.9485801 12.8428788 5.5999842 8.6358708 12.9276876 10.5090264 10.8611670 13.1389693 12.4244443 9.2089698 9.9554339 12.0844013 7.9411627 7.0574568 10.3319617 0.1188913 7.0961374 10.7980444 11.0586815 6.3020796 8.7347936 8.7959899 8.3017650 10.2283922 5.2887830 7.4646323 10.5239989 6.8146658 4.2618166 6.7335672 7.0029264 10.5057978 10.9219123 7.0574568 9.2686047 10.1179180 2.7038095 11.5509887 10.1023261 11.0050621 10.1894257 10.9750236 8.7566897 10.5834032 8.3185297 -0.4661377 9.4887819 1.8558303 11.7920193 6.7038205 11.0042996 9.8030216 6.3793853 13.6214407 10.3331766 10.3636177 13.0191583 11.3652022 9.6113784 -1.4659384 TCGA-B6-A0X0 54 1 3945 NA breast stage ia t1c n0 (i-) m0 female 1996 NA no other specify 0 white not hispanic or latino 5 2 2 NA 3 1 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 9.5154714 9.0876806 11.8961788 8.8553802 8.1364836 9.4409694 10.5472578 9.3221458 10.6413493 12.6812904 11.7701492 10.2221240 3.4422269 13.4316168 2.0796682 8.7681522 8.9951049 8.0503744 9.3873410 12.8798588 2.7317263 14.4841856 4.7958604 9.6901288 10.4829687 4.2722995 0.2722621 7.5249624 9.5817736 2.2722920 8.3221458 6.7399034 -0.7276184 3.0796512 9.2722974 9.7368431 9.7671529 11.8614803 10.1107134 10.7973287 6.3491122 11.6029341 14.8359405 7.9562391 10.0780412 11.6451624 10.9848243 4.1302802 3.4422269 8.4522062 12.0444057 NA 10.7480308 2.2722920 2.4422269 3.1791925 9.6429847 12.2570718 10.8162958 13.1085450 12.4790065 7.7193806 10.9985155 10.3015846 10.6527584 11.0820655 4.6646137 11.5047183 11.4490938 NA 10.2616918 9.2524369 2.4454354 3.4422269 12.1295008 10.2918881 10.3990018 9.0812616 0.8572644 10.0313533 12.1197462 11.9880449 10.3424183 10.1919056 -0.00041585 1.06290000 1.08190000 0.00194180 -0.00800120 0.00000000 -0.00304750 -0.00443120 -0.00443120 -0.63377000 0.02440800 0.02440800 0.00402430 0.00402430 0.56689000 0.56689000 0.56689000 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00180300 -0.00346270 -0.00346270 -0.00346270 -0.00138580 -0.00138580 -0.00138580 -0.00152430 -0.00041585 -0.00041585 -0.00443120 0.00194180 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00443120 -0.00443120 -0.00443120 0.01112100 0.01112100 0.04145800 0.00597000 0.00597000 0.00597000 -0.00369640 0.00402430 0.00402430 0.56739000 0.56689000 0.56689000 0.56689000 -0.00152430 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00180300 -0.68833000 -0.00346270 -0.00346270 0.01014600 -0.00138580 -0.00138580 -0.00152430 -0.00304750 0.00665910 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.1488141 12.1610406 6.7800922 8.7781090 NA 11.0744098 -0.7276184 -0.7276184 9.3289349 6.6731762 NA 6.7235080 0.2722621 10.1333842 9.0404815 NA 3.9727386 8.8553802 8.9161536 10.1985934 9.6816564 6.6298491 9.9596729 1.2723219 10.5998500 9.9587979 10.0972560 NA 10.3827806 2.2722920 14.6547525 12.4653606 5.9727363 9.6462500 6.6298491 9.3491129 2.9727294 -0.7276184 -0.7276184 0.2722621 9.0972560 10.1411199 10.2814261 2.4422269 7.7770764 7.1488141 10.3918869 5.8421517 9.6232364 NA 11.2584949 1.5942141 3.5942261 9.9049744 7.0661936 1.8572644 9.3676943 5.5011174 5.3808229 NA 14.9425110 1.2723219 9.9107333 NA 9.1162184 4.9161518 7.3329934 8.6774388 13.581489 5.316692 9.235193 13.431617 10.425849 11.547549 12.879859 12.586597 9.946490 10.584046 13.498333 12.656137 8.452206 8.564619 3.179193 7.557700 10.845945 11.392211 7.864754 8.951777 9.505917 8.645162 10.742082 5.179189 6.986543 11.770149 5.612146 1.272322 8.562316 5.578996 11.914123 10.010390 8.901654 9.027185 11.803435 4.226493 10.998102 9.767153 10.272297 11.124437 10.450962 9.298821 10.739903 9.517850 NA 9.916568 3.179193 10.748031 5.380823 11.113712 9.642985 7.520225 14.733393 10.156468 10.755105 13.361500 11.310873 9.761142 1.272322 TCGA-B6-A0X1 48 1 7455 5677 breast stage iib t2 n1 m1 female 1994 NA no infiltrating ductal carcinoma 16 white not hispanic or latino 4 4 4 5 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.387189e-06 4.161568e-07 9.6846398 9.2355339 10.9549613 9.9478330 8.7073301 9.9454490 8.1703387 10.2059627 10.7778087 12.7413974 10.8252585 10.2765733 2.9278396 12.4390331 2.7054472 9.0891570 8.0333795 7.9213899 6.8619578 4.3299416 NA 10.5824812 9.0703169 9.2916045 10.9334697 8.3078424 3.5799163 10.7162140 9.9478330 1.4424393 7.5298811 7.3348096 -0.8793826 6.1648848 10.0934700 10.7787017 9.6741195 8.9116532 9.3896169 11.3784673 8.7016908 7.0213576 13.9167834 8.1613551 9.6567375 11.0916745 10.9842894 3.1204847 -0.8793826 9.6371751 10.1566638 NA 9.7305924 5.9533793 6.9342712 7.5213696 9.5891142 11.9430611 10.9402702 9.4636760 12.6223274 8.3565044 10.7688479 10.2497604 11.8568922 10.7844930 5.3379144 12.6190902 7.7425419 NA 11.3843463 10.1077543 2.1204847 4.5799223 7.7822683 10.0061866 11.3278097 10.8217967 -0.8793826 5.2079514 12.5013571 12.0911354 9.3517114 9.6352042 0.0038854 0.7784900 0.7480300 1.6708000 0.7889100 -0.0938480 1.5662000 0.5625900 -0.0838640 0.5784400 0.5784400 1.7714000 0.7671500 0.0542330 0.8697000 1.4205000 1.3830000 2.1219000 -0.0960990 -0.1410300 -0.0877120 -0.0900960 -0.1043400 0.5913400 0.6476300 0.0059263 0.7039300 -0.1362600 -0.1095900 0.7564300 0.0038854 -0.1248600 -0.0276710 -0.1182200 -0.0941960 -0.1171300 -0.0863860 -0.1103700 0.6052100 -0.1171700 -0.1081500 1.5485000 0.5197800 0.8149300 0.8149300 1.4312000 -0.0564420 0.9725500 -0.1190000 0.8780700 0.7667600 -0.1002600 -0.0969490 0.6465300 0.7434700 0.7158400 -0.0809900 -0.0720070 -0.0268510 -0.0213730 -0.1043400 0.5913400 1.3823000 0.0059263 -0.1208800 -0.1095900 -0.0820040 -0.0986820 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.719 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 0.278 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.719 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 0.278 7.4333735 10.1973059 4.4058903 7.0920340 2.5799283 11.1400810 NA NA 9.0600695 8.7534855 1.7054472 4.7637674 1.4424393 10.8841176 8.8017287 2.8209346 4.1204930 9.1865795 6.9659805 8.9533802 10.0047295 6.2803625 11.1926229 2.8209346 9.7231891 9.6969747 3.1204847 NA 11.1624916 8.0243723 11.8686831 11.9246213 6.0031322 9.0016041 11.2705549 10.1077543 4.1648828 3.5799163 0.1204847 2.4424128 7.3103147 8.9877691 6.1648848 0.7054914 7.2261896 7.0630046 10.1621495 3.9784702 10.2355339 1.4424393 9.4139619 5.5467556 4.6123407 9.3182475 7.0447089 4.2904170 8.8853617 8.4514073 5.0746852 10.5623970 12.7967779 -0.8793826 10.7087365 0.1204847 9.7287450 2.9278396 9.1359052 8.5921655 14.171827 9.766149 7.878714 12.439033 9.894454 11.101344 4.329942 5.834736 9.812234 12.106688 13.282960 11.566281 9.637175 7.624316 4.978470 8.389617 10.803046 11.0471569 6.0746874 8.6263019 8.7461992 10.2257440 9.5294993 7.7204030 4.4780399 10.8252585 10.9741897 NA 7.5467548 9.8843250 12.7482521 11.9384732 8.3149761 9.2446117 10.7593787 10.6640055 11.1092140 9.6741195 10.1635176 10.7152814 11.2003084 8.9908550 10.8091777 9.0949048 -0.8793826 9.7060256 5.2702374 9.7305924 7.6043064 10.7806511 9.5891142 7.8853620 12.8659545 11.2897889 10.3696037 13.2875163 10.8048006 9.1879246 -0.8793826 TCGA-B6-A0X4 62 1 860 NA breast stage iib t2 n1b m0 female 1996 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 5 5 2 3 NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 10.9998702 9.9793467 11.5031288 9.3070004 8.6015101 7.7030903 11.3984913 9.8487448 9.8113188 13.5360522 11.4225811 10.5399186 3.2395661 12.1099309 3.7631247 9.8160505 7.9049019 8.6211090 9.8441193 13.6623536 3.7631247 14.4915293 1.5614972 9.8177500 10.3163817 7.9084509 NA 7.2450221 11.6710637 NA 6.5063528 6.3375987 NA 1.5614972 9.5716027 10.2880530 11.0830947 9.7020684 9.9128753 11.0069230 NA 10.5220755 14.2976001 8.9599301 10.4132371 11.3127035 11.2451907 4.4094928 6.1099309 8.8376185 10.1554455 NA 11.4051012 3.9400070 2.5614972 3.5614972 10.4318589 12.1915793 10.2941704 12.0813270 12.7833230 7.2948486 10.7792096 10.8380839 10.6663550 11.0893622 5.6489572 12.0785730 11.1321090 -0.7604798 10.1122410 8.9347945 4.3497616 2.8245235 10.5203369 10.1591744 11.0669088 9.3137075 -0.7604798 6.0597446 11.3316626 10.1569382 10.4069843 8.7274062 2.1340e-03 6.3964e-01 3.8826e-02 -1.1939e-03 -1.1939e-03 -7.2806e-03 2.4883e-02 0.0000e+00 0.0000e+00 7.4672e-04 7.4672e-04 3.6612e-03 -2.1635e-03 4.6336e-03 2.2728e-03 2.2728e-03 2.2728e-03 -1.0041e-02 -1.0041e-02 -6.7281e-03 -2.8557e-03 -8.5189e-05 -2.4597e-03 -2.4597e-03 -2.4597e-03 -4.5162e-03 -4.5162e-03 -4.5162e-03 5.3439e-05 2.1340e-03 2.1340e-03 -4.4393e-03 -1.1939e-03 -7.2806e-03 -7.2806e-03 2.4883e-02 2.4883e-02 0.0000e+00 0.0000e+00 8.8541e-04 6.2421e-02 4.8071e-02 7.4672e-04 -1.1939e-03 -1.1939e-03 -1.1939e-03 -1.1939e-03 4.6336e-03 4.6336e-03 2.2728e-03 2.2728e-03 2.2728e-03 2.2728e-03 -1.0041e-02 -1.0041e-02 -1.0041e-02 -6.7281e-03 -2.8557e-03 -8.5189e-05 1.0896e-02 1.9952e-03 -2.4597e-03 6.0805e-04 -4.5162e-03 -4.5162e-03 5.3439e-05 -1.7480e-03 7.1362e-03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.7314195 10.3559101 4.7631300 8.1099309 3.9944530 11.1010408 -0.7604798 0.8245642 8.4755802 7.1703037 NA 4.9400070 NA 10.2246966 8.9810332 0.2395202 1.8245235 10.2197057 12.4352459 10.8056201 9.7864124 8.0077505 10.2125459 -0.7604798 10.3905827 9.3467832 3.0469275 NA 10.0637293 3.6318842 13.3439192 12.3683660 6.3270298 11.1602912 7.6058884 9.1569383 5.2395661 1.5614972 -0.7604798 8.6989977 8.7748414 9.7030905 9.4803574 0.8245642 9.9492962 7.2507930 10.3733506 3.3270262 9.4343230 NA 13.6333588 0.8245642 11.4088648 9.7798589 7.6095563 NA 7.1584289 5.3056569 7.9119917 2.0469101 13.9911102 NA 11.0493343 NA 8.8376185 4.4094928 8.1099309 9.6500174 14.072686 3.698996 8.922561 12.109931 10.620027 10.612431 13.662354 13.912875 9.188225 10.011881 12.542062 11.424751 8.837618 8.275740 1.239581 7.434323 10.198844 10.6425781 7.3893130 8.9657843 9.0404659 8.2507934 9.7605481 3.3270262 9.1404328 11.4225811 6.8394784 7.8431925 6.9606658 5.7339806 10.6835457 9.6835456 9.3476592 8.8338907 10.1137790 1.8245235 12.0459949 11.0830947 10.6897464 9.9408727 12.1776754 8.6658308 10.7428950 9.3336438 NA 9.5109358 -0.7604798 11.4051012 9.1022035 11.9086727 10.4318589 6.9469250 14.5047020 10.7572355 10.4151157 12.9925739 9.5569788 10.3623942 -0.7604798 TCGA-B6-A0X5 61 1 2097 NA breast stage iib t2 n1b m0 female 1995 NA no infiltrating ductal carcinoma 3 black or african american not hispanic or latino 3 1 2 1 NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-07 10.19043869 9.37236819 11.32268649 9.10729738 8.80208333 9.92162199 10.09871365 10.26795521 9.06511774 13.90598069 5.97954295 11.09809856 NA 11.62018857 -1.09727036 8.63574170 2.71008456 9.08263554 10.57426739 13.56216482 -1.09727036 13.43860918 5.85692346 9.83941577 11.17389752 6.77924265 -1.09727036 6.77924265 12.35895237 -0.09727036 8.50077895 8.74035420 NA 0.48769214 9.36931270 10.48109900 10.22690682 10.48298488 9.77386153 11.04387549 7.24257678 11.13933851 13.61820576 8.02695107 9.25253819 11.57493065 10.73125954 3.42629160 NA 7.95529420 11.86146025 NA 11.63616541 3.22465773 4.22465773 3.90272964 6.62382590 12.12642639 9.57249712 10.70200797 12.73838202 7.80057186 11.06070478 10.60337840 11.23895389 10.84083566 5.29504339 11.65907416 10.32689256 -0.09727036 9.91395360 9.56895041 3.22465773 4.03201266 11.22662551 9.49891601 9.57515158 10.11400633 2.90272964 11.16775526 11.94198813 11.64671917 9.74821634 8.97016055 -0.00446220 -0.00446220 -0.00446220 -0.00210920 0.00260460 0.00080959 0.01642400 -0.00335530 0.00218830 0.90755000 0.90755000 0.91052000 0.00163320 0.00163320 0.00357650 0.00357650 0.00357650 0.00875480 0.00875480 -0.96796000 0.01499700 0.00274350 -0.01485700 -0.01485700 -0.01485700 -0.03343500 -0.03343500 -0.03343500 -0.00446220 -0.00446220 -0.00446220 0.01360100 -0.00210920 -0.01106800 0.00538280 0.01642400 0.01642400 -0.00335530 0.00218830 0.00218830 0.01765200 0.00107830 -0.96611000 -0.00606100 -0.00772740 -0.00321690 0.00232700 0.00163320 0.00163320 0.00357650 0.00357650 -0.00446220 -0.00446220 0.00875480 -0.01318700 -0.01318700 -0.93400000 0.01499700 0.00000000 0.01499700 -0.01485700 -0.01485700 0.02395600 -0.03343500 -0.03343500 -0.00446220 0.01429900 -0.06089200 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 0.000 6.7100818 10.3158253 8.5063528 7.0876018 3.9901925 10.1005574 -1.0972704 NA 8.3394381 5.6441937 NA 5.7356169 NA 10.0968676 9.0307207 6.5026393 6.8096164 9.7583735 10.8609165 10.2448010 9.8285626 7.8215897 10.0851207 1.4876921 9.8532823 9.4389735 0.9027296 NA 9.8612791 2.9901925 13.1505797 12.3563828 5.4725820 10.8699526 6.1506531 9.4867492 7.3078675 1.4876921 NA 6.2336427 8.3845256 9.5528806 10.4375155 0.9027296 7.2293360 7.4144789 10.4375155 6.7419307 10.1023987 NA 10.4360560 NA 3.4876921 10.0068074 7.3144491 0.9027296 7.5786837 7.3163539 7.4876889 NA 13.2797334 NA 10.5689503 NA 3.9471238 3.4262916 8.1291387 5.1881279 12.448380 4.394583 8.894248 11.620189 9.472582 9.433133 13.562165 11.420396 9.361543 10.402572 12.155540 8.700388 7.955294 8.204222 5.011250 8.160114 10.103625 11.099021 8.746647 8.665939 9.083879 10.077652 9.721085 4.394583 9.693075 5.979543 4.809615 1.224658 7.687361 9.091797 8.718110 6.902726 5.990190 8.414479 10.837891 3.150657 12.227168 10.226907 10.159525 10.216176 9.450585 8.480155 10.448656 9.099943 NA 8.871882 3.426292 11.636165 6.233643 10.305738 6.623826 7.224655 13.051123 10.323213 11.217876 12.120381 10.052473 9.730863 -1.097270 TCGA-B6-A0X7 62 1 1791 NA breast stage x t1c nx mx female 1994 NA yes mixed histology (please specify) NA white not hispanic or latino 8 2 2 3 NA NA 3 4 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.733986e-07 10.0429264 9.9194852 11.8930344 9.0977393 8.6851104 8.9985910 10.8087096 9.4610122 10.0813758 9.6964961 11.4938396 10.3477585 4.4347750 13.2575853 4.0120859 8.8498117 7.4376339 8.8095376 10.1777386 13.5074704 1.4338675 14.4512951 4.9966509 9.3372997 11.0836596 5.6173661 NA 10.9565927 8.0386946 2.9810489 8.1263792 6.9927696 -0.5424582 4.6669497 9.6553254 10.0781723 9.0877614 11.8132583 9.9603261 11.1134722 1.4574892 11.4038524 14.7567560 7.0448214 10.2466203 10.8615714 11.2527223 5.2519084 6.6173661 8.8017901 10.6784772 -1.5424582 11.1076485 7.8605066 4.6072415 4.6473203 9.8188899 12.1375241 10.4308329 11.6470100 12.7663310 8.8551690 11.0562447 10.8526133 11.2604145 11.2308396 4.9652902 12.2145717 13.0599032 -1.5424582 10.3143088 9.3247730 4.2406883 3.5449552 10.3045517 10.0777141 10.1841382 10.2277452 3.3154793 8.2140505 12.4531731 12.9153240 10.4149592 10.3785914 -0.4916200 0.4751200 0.7655600 -0.0024938 -0.0024938 0.0040243 0.0222250 -0.0019399 -0.0140900 -0.0642400 -0.0642400 0.6864500 0.0031981 0.0174040 -0.0912870 -0.0283240 -0.0283240 -0.0083005 -0.0083005 -0.0015243 0.0102850 -0.0488830 -0.4752200 0.0141900 0.0141900 0.0227250 0.0227250 0.0227250 0.0244080 -0.0548250 -0.4916200 0.0000000 -0.0024938 0.0040243 -0.0070576 0.0222250 0.0222250 -0.0019399 -0.0019399 -0.0140900 -0.5194800 -0.0024938 -0.4885800 -0.0018697 -0.0018697 0.0019418 0.0019418 0.0174040 0.0150280 -0.0912870 -0.0912870 -0.4997500 -0.4997500 -0.0083005 -0.0083005 -0.0083005 -0.0015243 0.0102850 -0.0488830 -0.4905500 -0.4861700 0.0141900 0.0112610 0.0227250 0.0227250 -0.0458040 -0.3239100 0.0255310 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 0.000 8.37337372 13.07099603 9.15446195 10.06574907 2.64890256 10.88297251 0.77938581 1.62742007 8.76127497 10.00294142 NA 7.67908172 3.58677675 9.92050769 9.39486822 0.77938581 9.04245693 9.51142020 10.15923396 10.32400048 9.76296332 7.66206518 10.87244372 1.77942783 10.17259827 10.00776007 3.31547928 NA 10.62773231 5.14399333 12.73848251 12.21133781 8.71134175 10.32129339 9.47638999 9.12460575 4.72427918 -1.54245824 -0.54245824 0.04250426 8.57123652 9.82108148 10.46346961 6.26484978 8.17270152 6.32168101 9.66572870 5.51277680 9.42544105 0.04250426 10.94483188 2.04246924 5.81504508 9.76896453 5.61393235 4.12991766 8.62867118 7.22898411 6.28404212 -1.54245824 14.23528898 2.15794915 10.10585182 -1.54245824 8.22898363 6.63740303 7.95734005 8.18371229 12.833552 3.411684 8.761275 13.257585 10.519540 10.857840 13.507470 12.334107 8.531796 10.405862 12.806568 10.390816 8.801790 11.000284 NA 7.440488 11.163343 11.030195 6.429038 8.457494 9.452555 7.918974 10.648350 5.115707 6.034922 11.493840 6.988876 4.849814 9.040577 5.446405 11.459958 10.187115 8.365887 7.877455 11.431909 6.094120 11.678494 9.087761 10.538312 10.004871 11.337269 9.709568 10.526608 8.309244 NA 8.737140 6.034922 11.107649 6.921019 10.591279 9.818890 7.274478 13.944455 10.081833 10.237624 12.420481 11.224230 10.391922 2.544955 TCGA-B6-A1KC 67 0 NA 1326 breast stage iia t2 n1 m0 female 2003 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 1 NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 11.17375364 10.44495213 11.06333420 9.55724331 9.08104690 7.39746843 9.75481854 8.76874740 9.09642211 14.42081202 6.95925780 10.75347217 0.95173698 12.11373546 7.05679918 7.38360926 6.25554416 8.53421961 9.11667068 13.41004226 0.36681177 15.21914794 NA 10.22982606 10.97574911 9.81440110 NA 8.13663898 9.83440689 2.06722567 6.66142183 5.95925780 NA 4.82623322 10.37593009 10.54515494 10.78834020 10.08276325 9.54172700 11.61413550 -0.04826302 10.90450510 14.13449439 9.01417868 10.26879952 12.68816576 11.73585333 5.72435286 4.70665211 9.84708664 9.59321351 1.82623322 10.97135451 6.57137192 5.43288927 3.45426803 10.23330750 11.91742788 9.92665640 9.34836854 12.81388454 9.42072723 11.51718331 11.27248539 10.82725719 10.60401126 6.01785289 11.91261046 12.48558021 NA 10.20600506 9.59742223 3.12755074 5.12168684 10.59922228 9.28789842 10.85086895 10.64263479 1.36681177 6.05330252 10.80948567 10.20087728 10.33402753 8.83338759 1.06050000 1.06050000 1.06050000 0.67152000 0.67132000 -0.13864000 -0.02376400 1.22020000 -0.70176000 3.65690000 3.65690000 1.23720000 0.19287000 0.22510000 -0.04352700 -0.06258300 -0.06258300 0.56410000 0.56010000 -0.71525000 -0.49146000 -0.23746000 0.65950000 0.65950000 0.68827000 0.31106000 0.31106000 0.31793000 0.42916000 -0.56718000 1.06050000 -0.19913000 0.67152000 -0.16727000 -0.13864000 -0.02376400 -0.02797500 1.22020000 -0.70176000 -0.73244000 0.00000000 0.00063132 -0.72962000 0.23072000 0.23072000 -0.72212000 -0.72212000 0.22510000 0.24397000 -0.04352700 -0.06258300 -0.03014400 -0.04626300 0.56410000 0.56010000 0.56010000 -0.67669000 -0.51938000 -0.23746000 -0.25012000 0.65950000 0.65950000 0.45131000 0.31106000 0.31793000 1.06830000 -0.71332000 2.51320000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.519 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.561 -0.660 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 0.000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.519 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.561 -0.660 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 0.000 7.41119572 11.14528916 3.17415071 7.41392490 3.95176495 11.26785675 0.36681177 NA 8.07416020 6.32099726 NA 7.40297452 -0.04826302 10.86739427 9.30343921 3.95176495 7.46483324 11.13436509 7.71774016 9.76019183 9.53098544 8.36256851 10.45459562 1.68871749 9.63475842 9.73585333 4.36680478 -0.04826302 9.86265642 5.76768128 12.43826369 11.15592736 7.97966984 10.13705223 7.89036339 9.24255059 8.43289053 7.35548589 -1.63307635 3.85865741 8.48962923 7.54422107 11.16992337 3.89035914 7.85067755 5.54670929 11.28789842 6.27969043 10.34013996 -1.63307635 8.11163492 5.67058261 5.48574238 9.86721494 4.10205338 -1.63307635 8.53045082 8.09472167 5.32099726 NA 13.86658493 -1.63307635 10.47793702 NA 7.71331502 5.50635122 9.28864233 9.18298497 13.263158 5.642927 8.572595 12.113735 9.320270 10.822385 13.410042 12.388996 8.867096 11.160405 12.564172 11.423947 9.847087 8.234080 1.688717 8.255545 13.574235 9.935707 8.695476 9.068108 9.929521 9.609975 9.250590 4.614728 7.840507 6.959258 6.400224 NA 2.067226 6.993387 12.171437 9.111635 8.797254 7.679684 11.443784 3.010655 13.310838 10.788340 9.907898 9.554772 11.937606 7.974132 10.131258 9.164463 NA 7.944683 2.454255 10.971355 5.121687 10.291614 10.233307 7.261619 14.282607 9.830837 10.699118 12.461704 9.210722 9.539229 1.366812 TCGA-B6-A1KF 68 0 NA 3088 breast stage iib t2 n1 m0 female 1998 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 9.13466529 9.62546448 11.33201232 8.08395208 8.69470019 8.94392865 9.40336040 10.83930600 11.07384580 14.35171945 9.32670249 10.99737434 5.03008442 15.31667665 2.38097874 7.76076452 5.36450590 9.78729418 5.00902463 5.95498492 NA 11.74054251 9.16830156 9.47457577 11.96167939 6.45294295 NA 5.53627053 11.81068461 1.50650039 7.65288010 7.41341384 NA 4.41341130 9.68311217 9.92928904 9.93906536 10.09711049 9.04568213 10.84748625 -0.07841133 5.36450590 14.64410169 9.60699309 8.89740895 10.90562332 10.93068974 5.34782508 1.24348630 9.22990007 10.16473487 NA 10.87830010 2.50652578 8.13344948 2.50652578 10.48951705 11.92525452 9.71841180 11.23812531 12.40625800 8.58333893 10.93767278 10.34467684 10.93976116 10.18834751 4.05084122 11.63279772 9.53166295 4.75444928 10.28076138 10.86517464 3.74734443 1.72892183 9.68144909 9.34362568 9.91237397 10.61722427 NA 8.84785695 12.04309446 11.94149909 10.62459937 9.07257747 1.2723000 2.5164000 2.4444000 0.0249460 0.4976700 -0.0109440 0.9815900 0.5108600 -0.0079090 -0.5295200 0.4708100 2.3043000 2.3902000 0.0042793 -0.5101400 -0.5101400 -0.3750600 -0.5063100 -0.5063100 -0.5038900 -0.5239100 -0.5317800 0.0544950 3.6569000 -0.4627600 -0.5081700 -0.5081700 -0.4697300 0.4381400 -0.4918500 -0.5112700 0.0078946 0.0249460 -0.0109440 -0.0109440 -0.5352500 -0.5334900 0.5108600 -0.0079090 -0.0140000 0.0179400 0.0194800 -0.5408000 0.0193400 0.0193400 0.0193400 0.0462520 0.0042793 0.0042793 -0.5101400 -0.5101400 -0.3750600 -0.3750600 -0.5063100 -0.5063100 -0.5118900 -0.4938200 -0.5239100 -0.5146700 0.5836000 0.0544950 -0.4627600 -0.5422000 -0.4310700 -0.4697300 -0.0165890 0.4978400 0.0756790 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.000 0.000 0.000 -0.506 -0.470 -0.470 -0.511 1.933 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.240 0.000 0.000 0.212 0.042 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.000 0.000 0.000 -0.506 -0.470 -0.470 -0.511 1.933 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.240 0.000 0.000 0.212 0.042 5.74173932 12.02681472 3.31388433 8.84785695 -0.07841133 12.39957212 -1.07856367 2.50652578 8.40739014 8.57081696 1.24348630 7.77018418 7.27470801 11.13951867 8.51401808 3.31388433 4.34782862 11.01860545 7.22534146 8.59751814 9.55018884 6.48380288 11.63795175 -1.07856367 8.58333893 10.04244681 0.50650039 -1.07856367 9.91874042 3.09147982 12.47471021 13.11554824 9.16235230 10.49046714 6.56541744 9.00636928 2.50652578 2.82844880 -1.07856367 NA 7.55455585 7.06621946 7.08143231 0.50650039 10.07125721 8.00104557 10.87938850 5.94392836 9.90882491 8.73213248 11.92138482 0.92158867 3.77954340 10.12480488 7.11538184 2.24348630 7.77954208 5.53627053 3.87576041 7.37688855 13.18137776 0.92158867 10.76469688 3.77954340 8.74492833 7.33941357 9.03269652 8.34572724 11.518217 7.840424 9.384063 15.316677 9.353059 11.845074 5.954985 9.024849 8.869928 9.837440 14.155929 12.228762 9.229900 6.869928 -1.078564 7.216181 11.356971 11.3820168 5.4761483 8.7919257 9.4626575 8.5399463 10.8123116 2.2434863 5.6764480 9.3267025 5.4451241 -1.0785637 8.8959754 8.9897748 11.6243830 10.1138537 6.8757567 7.4253863 6.8284513 1.9215506 11.6329526 9.9390654 9.6663948 9.6613415 11.6545763 11.8965132 10.7603709 8.3645046 0.9215887 8.9118069 4.8522985 10.8783001 5.8163795 11.2341689 10.4895170 7.1558514 13.2396800 9.9341855 10.2873365 11.8511892 10.5098071 9.6872614 4.5654144 TCGA-B6-A1KI 63 0 NA 2236 breast stage i t1c n0 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 9.3801866 9.7108550 11.3584242 9.2359974 8.6698665 9.0820428 10.0991255 9.3132236 10.4616956 13.8052247 10.8312199 10.5628314 5.8676988 13.4751040 2.6905065 9.0552380 5.6822868 8.2781985 8.6115357 13.1659634 0.8160672 13.7505881 9.3610015 9.9325890 10.1658712 6.0890553 NA 7.4694790 9.9289111 2.1379625 7.6255372 7.0765644 NA 6.3655018 10.4577879 10.1148635 10.6292839 11.0212195 10.2795615 11.5050159 0.2310637 11.0343986 14.3698264 9.5246498 9.0050381 12.2673342 11.2179833 3.1379625 5.6404648 8.6864018 11.1545879 1.5530164 10.6716844 4.5709243 3.3603643 3.1852640 10.3513125 11.9004027 10.4460009 12.1245658 12.6282813 8.3590691 10.2651858 9.9684446 11.0742106 10.5963035 5.2644989 11.1577413 9.5880767 NA 10.3330503 8.7309205 3.0900574 3.3603643 10.8798816 9.7224267 10.1885395 9.1794419 3.4010024 9.2617419 12.3585048 11.3201941 10.0746032 9.2548290 -0.143100 0.508220 0.529290 -0.125120 -0.109420 -0.108410 0.229310 0.063223 0.065656 0.022986 0.022986 0.023426 -0.170560 -0.170560 0.137910 0.137910 0.137910 0.143250 0.142670 -0.169290 -0.125970 -0.147910 0.134750 0.134750 0.141170 0.108180 0.108180 0.108180 0.311490 -0.143100 -0.143100 -0.120040 -0.125120 -0.121570 -0.108410 0.219350 0.219350 0.063223 0.065656 0.082600 0.051530 0.051530 0.038800 0.177840 0.177840 0.177840 0.142560 -0.170560 -0.170560 0.145190 0.137910 0.137910 0.137910 0.143250 0.142670 0.123290 -0.169290 -0.125970 -0.139490 -0.337560 0.134750 0.134750 -0.443720 0.108180 0.108180 0.315940 0.161900 -0.049559 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 7.9725416 12.3839140 4.0384274 9.7363901 1.2702299 10.1477006 0.5529672 -1.7690592 8.5371365 8.5530029 NA 7.8409554 2.5529918 10.1702865 9.2225964 -0.1839328 7.4405279 10.2029774 12.3506643 10.2471865 9.7886055 8.3395993 12.3433512 2.0384362 9.9842914 9.4742486 2.8749346 3.9315129 11.0303563 3.7546417 12.9645137 12.3358372 9.5467903 10.3940953 7.6425853 9.4022515 2.0384362 0.5529672 -0.1839328 -0.7688134 8.7856637 10.2730759 10.2436992 5.3291057 6.7959864 6.1968588 10.5513112 6.8604315 10.1610728 0.8160672 12.7487441 2.6905065 6.0702777 9.8032017 5.2585378 0.2310637 9.4060004 8.8676994 7.2169165 NA 13.9151384 1.5530164 10.5147419 -1.7690592 8.7169038 7.5210932 8.2282540 9.0536455 13.148611 6.173589 8.366784 13.475104 10.116008 11.231603 13.165963 12.014380 9.246406 10.531141 13.068604 8.193971 8.686402 9.005862 NA 7.588627 11.880443 10.949179 7.804722 9.003389 8.839329 8.439309 9.975492 4.972541 6.945320 10.831220 6.627680 2.401002 6.012435 6.081887 11.023458 10.314222 8.419664 8.656290 12.349286 3.958991 12.355622 10.629284 10.384310 9.997189 11.772292 10.028331 10.664399 9.320525 -1.769059 9.652282 3.038436 10.671684 7.553003 10.402564 10.351313 6.750711 12.969642 10.195054 10.991795 13.044906 9.722427 9.875832 1.816026 TCGA-B6-A1KN 57 0 NA 4233 breast stage iiib t4b n1 m0 female 1998 NA yes infiltrating ductal carcinoma 24 white not hispanic or latino NA NA 1 1 NA NA 2 2 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 1.387189e-06 2.774378e-07 10.5197199 10.5794726 11.6404093 10.0206525 8.5432991 9.4000358 9.4477831 10.4127386 9.0518862 14.4652700 10.5427353 11.2098781 3.6136849 16.8910760 4.0542581 8.1986508 5.7836138 8.9895552 6.0415496 12.8090898 -1.7784322 13.8678733 2.7449361 9.1791985 11.6315572 7.6910127 3.4308205 7.2874603 11.8025715 2.3088268 6.6971038 7.2793626 -0.7786797 4.4111957 10.3500096 10.4311288 9.6179756 10.9078714 9.7410071 12.0363538 NA 9.7400241 13.9670189 8.9381131 9.1417237 11.1114451 12.0581116 4.4501885 5.0027295 9.5871465 11.6865546 -1.7784322 10.8966664 4.3088341 5.9492921 3.8360857 10.6694872 11.8640995 9.6859167 11.6982436 12.8869844 6.2820672 11.4811141 11.1019148 11.0863308 10.8056288 4.2874575 11.9819869 11.2611467 -0.1936347 10.2867870 9.9556572 3.5222316 4.5612223 11.1624185 10.1799236 9.9624164 10.4277748 2.8652260 9.1342602 12.8567489 11.3217047 9.8764543 8.9670452 -0.598530 0.995780 0.057842 0.054279 0.062698 -0.058284 0.045895 -0.047893 -0.614760 3.656900 1.702300 2.082700 -0.255360 -0.255360 -0.200330 -0.200330 -0.200330 -0.598050 0.050296 -0.517630 0.148950 0.084256 -0.574910 3.656900 -0.223510 -0.508120 -0.208920 -0.208920 0.316320 -0.575540 -0.598530 -0.185840 0.054279 -0.058284 0.047873 0.050012 0.050012 0.138250 -0.614760 -0.614760 -0.605230 0.060268 -0.618020 0.068998 0.068998 0.068998 0.068998 -0.255360 -0.255360 -0.261390 -0.200330 -0.284500 -0.284500 -0.570780 0.050296 0.050296 -0.512150 -0.596110 0.041752 0.077177 -0.573050 -0.223510 0.000000 -0.492630 -0.208920 -0.244070 -0.245660 -0.548410 -0.255 -0.255 -0.261 -0.261 -0.598 -0.598 -0.518 0.149 0.000 0.000 0.000 -0.573 -0.573 -0.221 0.000 -0.508 -0.508 -0.576 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.583 0.000 0.000 0.000 -0.417 -0.417 -0.255 -0.255 -0.261 -0.261 -0.598 -0.598 -0.518 0.149 0.000 0.000 0.000 -0.573 -0.573 -0.221 0.000 -0.508 -0.508 -0.576 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.583 0.000 0.000 0.000 -0.417 -0.417 8.2739387 12.0884565 5.9695627 9.0917355 2.0783707 11.2079240 0.8063653 0.8063653 8.6444869 7.3736560 -1.7784322 8.3812423 0.8063653 10.5079286 8.6179758 1.0287106 7.6222503 9.9733333 11.2144862 9.4793480 9.4387954 7.5251520 10.6859166 1.3912728 7.9978039 9.2800390 2.9218171 -1.7784322 10.2050771 4.6643122 12.2206663 11.6178419 8.3467845 9.8217485 9.9787609 9.0855569 7.2465107 1.3912728 0.2213203 5.7527513 6.8616155 6.7759592 11.0880703 4.6136908 8.4019389 6.2928333 9.7566462 6.2381792 9.3596426 0.2213203 9.7021611 2.3088268 4.3088341 10.1930474 5.3194012 5.2213706 9.4603725 7.6115398 5.9148587 0.2213203 13.8454809 -0.1936347 10.6725820 NA 6.3557968 5.5789236 8.8579956 7.1784726 12.5694766 6.7912267 8.5974962 16.8910760 9.5393486 10.5404784 12.8090898 11.2331223 9.3028543 10.4642473 13.9172244 9.7566462 9.5871465 8.3390140 0.5432979 7.6007492 11.6265123 11.039554 2.806324 8.486986 9.367303 8.752752 10.990525 5.066860 8.406246 10.542735 6.651824 3.391300 7.930455 9.529061 11.009069 10.546114 8.450190 7.416128 11.854252 5.232599 11.912254 9.617976 10.069211 9.854366 10.784567 9.471669 11.466775 9.367303 8.927867 9.409051 6.249277 10.896666 5.962838 10.373022 10.669487 6.959463 12.905243 9.746892 10.433259 12.487865 9.839297 10.024695 1.806324 TCGA-B6-A2IU 62 0 NA 5176 breast stage iia t2 n0 m0 female 1998 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 5 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 10.095630 9.389611 12.105078 8.771805 9.015731 9.229510 10.948044 8.841290 10.564852 9.709992 8.931145 10.647999 3.693799 13.775656 4.771806 8.611340 7.529502 8.258587 9.409574 13.008826 1.845791 14.931245 4.653163 9.842601 11.293715 9.084210 2.331247 9.306876 8.848058 1.108826 6.663429 5.966820 NA 4.167735 9.827658 9.815048 10.613990 11.620263 8.911895 11.284182 11.690668 10.825374 14.621292 5.929360 10.189214 11.590639 10.631748 5.406520 4.278765 9.190989 13.748181 NA 10.730892 4.167735 3.611338 4.881430 9.571002 11.597350 10.674260 11.474798 12.920081 7.551784 10.155055 9.964321 11.652194 10.735158 4.331232 11.580177 12.050377 NA 10.246685 8.861499 4.099792 3.916200 10.179408 8.681224 10.878678 10.214749 NA 9.644115 14.545161 11.404226 9.811590 9.927955 0.9465000 1.2234000 1.2234000 0.0066653 0.0132130 0.0204830 0.0172640 -0.0075039 -0.6628100 0.6468900 0.6468900 0.6483600 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.0149160 -0.0154660 0.0036076 -0.6564000 0.0070826 -0.0154660 -0.0570970 -0.0570970 0.5915200 -0.0633010 -0.0633010 -0.0633010 -0.0278080 -0.0522610 0.0109820 -0.0070099 -0.0123610 0.0204830 0.0243820 0.0172640 0.0061090 -0.0075039 -0.6628100 -0.6812000 0.0076520 0.0038854 0.6468900 -0.0056757 -0.0056757 -0.0056757 -0.0056757 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.0149160 -0.0149160 -0.6777500 0.0036076 0.0036076 -0.6652700 -0.0044385 -0.0154660 -0.6926600 -0.0476660 -0.0570970 -0.6605900 -0.0633010 -0.0633010 -0.0278080 -0.6321600 -0.0385780 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 0.000 7.850307 12.079905 6.292062 8.668536 3.523876 10.756299 1.845791 -0.476137 8.642819 7.995553 1.523863 7.272071 2.983313 10.169536 9.781265 3.523876 6.958506 9.021729 12.533881 11.155055 10.133786 7.757497 10.422479 3.331232 9.479527 10.023723 6.535104 NA 10.280434 4.047442 12.634850 11.777725 7.478074 10.861499 7.350426 9.280434 2.523888 2.108826 2.693810 8.703787 9.138587 10.057207 10.323159 5.733330 6.816751 6.600693 10.709992 5.167735 10.078466 -0.476137 10.631095 4.381858 3.845801 9.506272 5.372625 2.331247 9.690041 6.790664 6.331232 1.523863 13.578482 NA 9.794173 NA 5.589967 4.950142 7.424744 8.344057 12.228307 3.983313 8.865952 13.775656 9.315040 11.108370 13.008826 12.355581 9.017733 10.500442 13.566990 11.013224 9.190989 9.027703 1.108826 8.078466 11.561768 11.125648 6.489662 8.592656 9.631095 8.726001 10.686930 5.546246 7.153234 8.931145 6.512562 1.523863 3.845801 6.964498 8.920482 10.701297 6.872606 9.370935 12.654448 2.693810 13.621148 10.613990 10.537200 10.083255 10.831078 9.846932 10.793589 8.898917 -0.476137 8.628922 3.771801 10.730892 9.938563 10.825374 9.571002 7.167734 13.399051 10.121930 10.435270 12.195198 10.634361 9.836760 0.523863 TCGA-B6-A3ZX 50 1 1152 1132 breast stage iv t3 n1 m1 female 2007 NA yes mixed histology (please specify) 1 black or african american not hispanic or latino NA NA 2 4 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.005712e-06 5.548757e-07 10.1269691 9.0333203 11.6498831 9.7867265 9.1963648 9.7261928 10.0771638 10.3967986 9.8401560 11.5135790 11.1678889 10.3336470 1.2077055 11.4477899 2.5702443 9.8150103 6.4717874 10.1286709 10.2032453 7.4877878 -1.5994621 10.7298412 8.3310625 9.9734563 10.4748012 4.5901469 -0.5996807 10.6155548 10.9570707 2.8597509 11.1113468 7.9238872 NA 5.6387313 10.4606833 10.0477836 9.7205617 10.4737973 9.7429554 11.3036422 3.4877822 7.8658916 15.0114220 9.0852666 10.8666540 11.6799357 10.2610242 5.6764508 -0.5996807 8.9150392 10.6816756 NA 10.2985486 6.2706896 8.2676037 5.1552109 9.2442461 11.8969293 9.9486654 10.8991743 12.6034437 8.1076842 10.7636386 10.7468388 10.7630909 11.2119005 5.6671115 11.0191695 9.3079669 1.4003193 10.5799233 9.4136478 4.5706511 6.7357158 11.4494930 10.9302437 11.2637371 9.1510320 2.4003193 7.8981769 12.7629539 12.2847819 10.1610451 9.4556075 0.05480300 0.05480300 0.05480300 -0.06772600 -0.06772600 -0.01723400 0.35920000 -0.04631200 -0.04631200 -0.03408300 -0.03408300 0.55089000 0.08074500 0.00104130 0.08132200 0.08132200 0.08132200 0.01014600 0.01014600 0.68087000 -0.14644000 -0.05253100 0.09188000 0.10162000 0.10162000 -0.09393100 -0.09393100 -0.09393100 0.00569190 0.05480300 0.05480300 -0.11268000 -0.06772600 -0.03045200 -0.27655000 -0.12584000 -0.12584000 -0.04631200 -0.04631200 -0.04631200 -0.03463100 -0.10395000 0.00097064 0.05865200 0.05865200 0.05865200 0.05865200 0.00104130 0.00104130 0.08132200 0.08132200 0.08132200 0.08132200 0.01014600 -0.06920000 -0.06920000 -0.17193000 -0.14644000 -0.12784000 -0.11090000 0.09188000 0.10162000 0.08695600 -0.09393100 -0.09393100 0.00569190 0.02848100 -0.10552000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.8404157 12.1201418 3.8921773 10.2422825 9.0214611 11.5381168 9.0762822 6.5347511 9.0141145 7.8720001 7.5702504 7.5088493 4.2583079 10.0833198 9.4831394 2.5702443 10.4087538 10.2153080 9.1734643 9.9969808 9.6027122 7.5677432 10.5427514 1.7222474 7.4143453 10.4278856 5.1947411 NA 11.3345689 3.7926472 13.2673142 12.4684316 6.3833189 9.7958593 7.9946499 9.2852589 4.2829661 2.7222474 -0.0146453 2.9238908 9.1701629 9.7677399 7.6694520 3.9549128 8.8380148 7.6482526 9.9558729 7.9871651 10.5608269 -0.5996807 12.7323617 5.9472196 4.4226905 9.2575130 7.5251700 10.3982102 9.4884509 8.8720004 10.8271140 3.7926472 13.7073836 2.2076742 10.8244914 1.8597708 10.1222788 5.3890092 8.8276380 8.1042287 12.918463 7.444719 8.364666 11.447790 11.057320 9.821338 7.487788 9.902162 9.248839 10.948184 13.941694 12.177169 8.915039 7.252074 4.550070 8.140106 11.214507 10.983643 5.619492 8.495722 9.503613 8.201225 9.651376 10.328473 8.970181 11.167889 10.726474 8.430992 9.648253 8.360819 11.658008 11.788342 7.817777 10.212904 9.302700 10.177169 11.262224 9.720562 10.617071 10.895930 10.733481 11.138629 10.744898 8.601224 NA 10.631186 10.779433 10.298549 5.498356 11.026566 9.244246 8.131950 13.768933 10.097727 10.416437 12.550945 11.865892 9.469775 3.354523 TCGA-B6-A400 43 0 NA 215 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 4 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.878418e-06 7.282743e-07 10.1317851 9.1295244 11.2828466 7.7396557 8.1044200 8.3403428 9.0889901 10.4832269 11.6566560 12.3636926 10.5796706 10.4211205 1.5498170 12.1335723 0.5498170 10.6391494 7.7076835 9.4852910 9.6573099 6.4373559 NA 8.4970299 8.2599489 10.0143771 10.6126870 7.4899980 2.0352720 12.3802998 11.8667916 2.8717648 8.8590803 7.6116077 -0.7720125 4.4567207 9.9382792 10.2746862 9.2037513 8.4385744 8.2066134 10.2436667 0.8128678 6.4993660 15.9048520 8.8579518 10.2990303 10.5832543 10.4245053 4.3571860 1.3978030 9.2825075 8.7016090 -1.7720125 10.2763901 4.8572595 6.3928103 6.4567224 8.1704178 11.9967078 10.1128368 12.2043778 12.1980091 7.6051135 10.9691595 10.7668051 10.9575240 10.2875856 4.0352544 12.1436892 10.9551856 0.2278643 10.7798517 9.6990704 4.4006336 4.1586440 8.9575240 10.4340018 11.2843716 9.3814551 3.3571860 7.7534240 12.8479512 11.2887680 10.3308631 10.4309453 0.85146000 1.66650000 0.51333000 -0.00401620 1.07270000 -0.02051400 0.57612000 0.66253000 0.02300500 0.79510000 0.79510000 1.16980000 -0.04712400 -0.03626500 0.16115000 0.16115000 0.16115000 0.46177000 -0.03572100 2.06680000 -0.02359200 -0.16891000 -0.07000100 -0.07000100 0.37084000 -0.13419000 1.68050000 -0.11757000 0.56490000 -0.48869000 -0.00055444 -0.11756000 -0.02034600 -0.50929000 0.01754400 -0.49705000 0.17211000 0.66253000 0.02300500 0.03721700 -0.02534600 -0.07506700 0.40512000 -0.05698100 -0.02575600 -0.06319500 -0.03989000 -0.03626500 -0.03626500 -0.03425000 0.16115000 -0.48321000 -0.48321000 0.46177000 -0.03572100 -0.03572100 -0.50585000 -0.02359200 0.17815000 0.00463570 -0.07000100 -0.07000100 0.06881500 -0.13419000 -0.11757000 -0.16497000 -0.49788000 0.23287000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.372 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.459 0.459 0.000 0.000 1.170 1.170 0.000 0.000 0.000 0.000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.372 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.459 0.459 0.000 0.000 1.170 1.170 0.000 0.000 0.000 0.000 8.4373568 14.2216819 1.6873295 10.4272688 3.3153633 12.4761273 2.4758372 6.7076835 8.7977588 11.4087448 8.1586405 8.8614161 5.1467652 10.2852181 9.5688659 6.0158053 6.9283431 11.1134089 9.2229637 10.7836906 8.2118659 6.7317290 11.5025726 1.5498170 9.2123218 10.6755031 5.8499542 NA 10.6893827 3.9003258 11.7445882 12.8579428 7.2080431 9.1097818 10.3924959 11.4807164 4.6541663 3.6873295 0.2278643 6.5810499 9.2661362 9.9541214 7.4923459 9.1857308 10.1151390 8.7056614 10.1879052 6.1586400 10.3193386 1.3978030 12.0948923 4.3153633 4.3978303 9.0983682 7.4931197 1.9283514 9.5548944 7.7495034 4.2279028 6.1287697 13.4278439 0.2278643 11.1926051 2.5498416 8.7534240 4.0092665 8.0432865 7.6245082 13.619868 10.121584 8.035258 12.133572 10.507473 10.963248 6.437356 11.273151 9.055246 10.844682 13.959381 12.391631 9.282507 7.735698 4.782492 8.515615 10.481455 11.2401785 4.9421485 8.1196871 9.7117189 8.4579238 10.3786057 7.5040276 5.5677523 10.5796706 11.8541826 -1.7720125 9.7026231 9.3416258 12.7451420 10.7352024 7.7376780 10.2041093 6.8608983 7.5876530 11.1208141 9.2037513 10.3648943 10.6080936 11.2628741 11.7128520 10.6105272 7.5964097 NA 9.0069165 4.4177310 10.2763901 6.8015506 11.1122645 8.1704178 7.9794475 13.7544330 9.6212937 9.7381728 12.2663078 11.4417668 9.0928631 -0.7720125 TCGA-B6-A401 47 0 NA 2596 breast stage iia t1c n1a m0 female 2007 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 10.12187822 8.59465715 10.14690809 7.49146913 8.84486768 8.28860034 10.05153320 10.04313723 10.74141626 13.89950421 10.95289417 10.14080051 3.81010373 13.42274596 1.45254272 10.94139452 6.39506451 7.81449403 10.04360493 12.19106471 5.34736802 12.67186997 7.05617598 10.76651301 10.68347128 6.44123447 NA 10.57083270 10.80321315 -1.54750999 7.32906707 8.01288317 0.03745251 2.45254272 9.40237684 9.45887616 9.40237684 11.13510592 9.84164375 11.15320664 10.02950686 11.44247682 14.80652399 9.20353350 9.78625901 10.92727012 10.75032621 5.44123447 3.49694802 8.17022653 10.63370247 NA 10.47457111 5.09640524 7.25021124 4.84486768 9.40529147 11.50986505 10.20868941 12.05536501 12.25789099 9.04687490 10.74515942 10.09167828 10.27671335 10.62247514 4.09640524 11.45554094 10.56986861 -0.54750999 10.67413726 9.45395827 3.99944085 5.06726010 11.40328828 9.71523240 10.76628350 8.95736908 2.70048411 9.80514539 14.22491630 12.80913970 9.82976063 9.48803653 0.00000000 0.84396000 0.83879000 0.18768000 0.18768000 -0.21181000 -0.00133790 -0.12499000 -0.12499000 3.65690000 0.31418000 0.57117000 -0.01032900 0.00013863 0.02272500 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.21392000 0.10701000 -0.00138580 0.21253000 0.21253000 0.21253000 0.21345000 0.21345000 0.21345000 0.37101000 -0.04197400 0.00000000 -0.02027500 0.18768000 -0.21181000 -0.21181000 -0.00580060 -0.00249380 -0.12499000 -0.12499000 -0.12499000 0.41451000 0.53204000 -0.34905000 -0.28258000 -0.28258000 -0.28258000 -0.30511000 0.00013863 0.00013863 0.02272500 0.02272500 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.05037000 -0.21392000 0.10701000 -0.00138580 0.13007000 0.21253000 0.21253000 0.15621000 0.21345000 0.21345000 0.32840000 0.14890000 -0.02794500 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 0.000 9.0690990 13.6375417 7.9242252 10.4602782 4.5359783 10.0214563 5.1249774 -1.5475100 9.1973841 7.9444034 -1.5475100 6.7699634 8.2550663 9.9479056 10.0008904 5.0964052 7.9303086 9.4276816 8.8777660 11.3050797 8.9992517 7.3473680 10.9586098 1.7744603 9.8523621 10.2976481 4.5610756 NA 10.9206650 3.5400149 13.2277489 12.3748558 7.3229151 9.0791719 8.2917541 10.4415898 7.2917536 2.1529946 0.4525954 8.6680833 9.7081690 10.3256097 9.3397707 5.0375140 10.9876116 9.0800841 10.4351873 6.3042993 9.5479472 0.4525954 10.1948596 3.4969480 4.6423723 10.0096787 7.9833858 6.3167359 9.7298376 7.3443341 7.3503956 5.1667958 13.4510084 NA 10.9045339 -1.5475100 8.6111598 4.9761116 7.9303086 8.8001716 12.1658798 6.7699634 8.1285074 13.4227460 9.7834670 11.2406567 12.1910647 11.4947225 9.1354043 9.8824800 12.9793550 11.0589554 8.1702265 8.8996334 0.7745024 7.1460371 11.6312150 10.633702 5.911982 8.759751 8.979049 8.182171 9.323901 7.740262 8.757472 10.952894 7.291754 1.037523 8.108975 8.025137 10.936870 9.914030 8.082945 9.561075 10.414362 6.207438 12.566191 9.402377 10.150387 10.491469 11.168083 10.436613 9.929803 8.197384 4.642372 9.603605 7.081906 10.474571 7.316736 11.000890 9.405291 6.627476 13.691179 10.093699 10.078259 12.875009 11.765858 9.124091 1.037523 TCGA-B6-A402 47 0 NA 2134 breast stage i t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 1.075072e-06 4.161568e-07 9.6348628 8.4480163 11.2625678 8.8418558 9.1332249 8.2478967 9.9185766 10.2464454 13.2504326 12.7086462 10.7482339 10.2987227 3.7923244 12.2226571 2.6117626 9.0346612 7.2047110 9.0447149 9.5081888 1.7048720 0.2898345 5.6590597 11.2879475 9.3116493 10.8065122 5.5122206 NA 9.7451545 9.9862152 0.7048720 9.6857184 5.9809895 NA 2.7923348 7.6561495 10.0463836 8.8797903 9.2323418 9.8716555 11.4744960 2.0268001 8.2146397 14.9353543 7.7495591 10.1025394 10.2454771 10.0262292 3.7048609 1.2898345 8.7976220 8.9994854 -0.2951280 10.2176052 3.3487140 4.8747920 4.4862252 10.1211345 11.7372549 11.5517263 11.1038756 12.6170992 8.0335397 11.0080747 10.6282814 11.5234469 11.8399327 4.0130245 12.0744621 11.6291206 -1.2951280 9.7020442 9.6311607 4.2904318 2.9527995 8.3541211 9.7923276 10.9228225 10.7031026 3.2284339 6.7327712 12.4051961 11.4423234 9.6132574 9.8885002 0.919250 1.588500 1.607000 -0.096272 0.071391 -0.514550 0.074265 0.344370 0.398860 -0.704940 0.263410 2.564000 0.585450 -0.374590 -0.603610 -0.130120 -0.130120 0.113060 -0.214780 -0.055634 0.381980 -0.122000 -0.403620 0.182070 0.795290 3.656900 1.097500 -0.353390 1.151600 0.213300 -0.387160 0.119340 -0.096361 -0.321820 -0.547740 -0.653420 -0.653420 0.344370 0.411510 0.407270 -0.640290 0.424090 -0.735330 -0.093667 -0.093667 -0.433870 -0.433870 -0.374590 -0.405180 -0.603610 -0.130120 -0.122260 -0.122260 0.113060 -0.214780 -0.214780 -0.055634 0.109060 -0.135020 -0.228590 -0.403620 0.182070 -0.368950 -0.432570 -0.863500 0.402770 1.156400 0.379240 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.324 -0.324 0.000 1.607 0.124 0.124 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 0.000 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.324 -0.324 0.000 1.607 0.124 0.124 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 0.000 6.5813814 12.4916449 2.6117626 10.2401402 2.2409249 11.0046451 -0.2951280 1.8747970 9.7513067 9.1967179 4.6821463 8.6147577 0.7048720 10.3869815 9.8140425 3.7492554 3.7048609 11.4526382 5.2594533 9.6677607 9.2856510 6.9948840 10.9719440 -0.2951280 9.0502699 10.2469293 3.0268001 NA 11.2851233 3.4597464 13.3484955 12.4034609 5.4730498 9.9616631 8.6459124 9.0950338 0.7048720 2.1643036 0.7048720 4.3487211 8.2709190 10.1211345 8.7976220 1.2898345 8.8764795 8.1078767 10.2454771 4.8747920 11.0646143 3.4597464 12.1244300 2.1643036 4.5628469 10.1909053 6.8072081 3.9527902 8.0357817 6.5752291 5.5996838 8.5250439 14.0054676 0.2898345 10.2737709 1.2898345 9.5440686 7.0491602 7.4122235 7.0222779 13.328885 7.862211 7.713294 12.222657 9.747235 11.628007 1.704872 11.305939 8.842983 10.092882 13.814614 12.666767 8.797622 8.949229 4.813391 8.245961 11.215876 9.942672 5.079903 8.178571 9.413086 9.313120 9.636415 4.164296 3.228434 10.748234 5.813389 NA 9.607240 9.017010 12.113194 9.004073 8.542493 8.844416 5.813389 4.682146 10.752445 8.879790 10.501716 10.249829 13.108143 11.987374 10.151948 8.099327 NA 9.324755 4.537756 10.217605 7.058011 10.393884 10.121134 8.236246 13.943046 10.966666 10.596648 12.186412 11.421256 9.277565 1.289834 TCGA-B6-A408 55 0 NA 2072 breast stage iiic t2 n3a m0 female 2008 NA yes mixed histology (please specify) 10 black or african american not hispanic or latino NA NA 1 1 NA NA 1 2 3 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.161568e-07 10.31508048 9.46652741 11.89898332 8.46437993 8.81383729 9.18723650 11.10806420 9.21560143 10.25008318 12.46276727 12.08518764 10.27602644 6.39542274 12.96071508 3.34651728 10.03011257 5.74592033 8.55462108 6.68820414 12.85225608 3.48852786 14.32030927 6.91479650 9.73730160 10.59149187 7.11424103 1.29589931 10.28619352 10.99136375 2.94796532 8.90954482 6.63827951 0.81048423 5.46581125 9.93251153 9.70830555 8.81944881 10.70163621 9.48076213 11.15186769 1.07347751 11.64160893 14.51702082 8.23539870 10.82531746 10.46330499 10.37193898 4.29588462 1.07347751 8.29427566 10.05315778 0.07354606 10.36619958 5.46581125 6.90216043 5.51089864 8.96020731 11.74104958 10.80707481 10.47295042 12.47197096 7.88727546 10.56601531 10.80035118 10.73705260 11.14495682 5.07349465 13.26424511 11.98176198 0.48851501 10.85074974 8.97637194 5.24475389 5.94796299 10.26660912 8.80594471 10.58161939 9.31189927 8.26002142 6.64840360 12.11229917 11.22451099 9.89845326 10.19113758 0.24747 0.22905 0.27505 0.27143 0.26279 -0.14541 0.29565 0.28074 -0.15944 3.65690 2.41040 0.61498 -0.13820 -0.13820 0.27583 0.27583 0.27082 0.34534 3.65690 -0.98264 0.26467 -0.13225 -0.53642 -0.12004 -0.12004 -0.10880 -0.10880 -0.10880 0.31113 0.24747 0.22905 -0.13070 0.27111 -0.14541 0.27553 0.29565 0.29565 0.28074 -0.15579 -0.11796 -0.13393 -0.13393 -0.98815 -0.97693 -0.96767 -0.13225 -0.13225 -0.13820 -0.11273 -0.55547 0.27583 0.27082 0.31691 0.28305 -0.55436 -0.54118 -0.96078 0.26467 0.30234 -0.55216 -0.53642 -0.12004 0.28723 -0.10880 -0.10880 0.31113 -0.12291 -0.54898 -0.138 -0.138 0.271 0.271 0.279 3.657 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 0.000 -0.138 -0.138 0.271 0.271 0.279 3.657 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 0.000 9.62680378 13.22128237 7.72932300 9.93768057 4.27460459 11.36005223 3.13239588 1.07347751 9.03156365 9.38562107 -0.51148499 6.77855028 4.39541932 9.64903374 9.75590388 3.69798505 7.26660947 8.50534037 7.36197622 11.11401252 9.38530333 7.65594997 11.21538872 3.13239588 9.61006551 9.89686170 3.53292782 -1.51127935 10.73734901 3.13239588 12.55772996 11.98176198 7.46294636 9.90901850 11.83504568 9.17765648 3.57598995 2.18897055 NA 10.97259961 9.22408804 10.62840298 9.86953401 0.48851501 8.55408267 7.83060647 9.84773248 3.91479411 9.22069948 NA 11.46670613 3.88085202 4.82838278 9.51771564 6.77305479 8.16095749 10.23672484 8.63954837 10.07724660 0.07354606 13.74433509 NA 10.56835005 NA 8.65594997 4.86357178 8.29588692 8.02769096 14.458046 4.160961 8.243420 12.960715 9.164489 10.306315 12.852256 11.825736 9.210955 10.701940 12.765311 9.572676 8.294276 7.992358 1.295899 6.927324 11.097942 10.8743944 5.1178903 9.0002846 8.8947368 7.9105966 10.6528984 8.0621789 8.2974959 12.0851876 7.6955464 0.8104842 6.7125339 8.4530751 9.9973171 10.7605785 9.3174617 9.1609572 10.4196387 8.4643799 12.0692169 8.8194488 11.2870038 10.6693735 11.2432107 10.3806953 10.1436154 8.3198392 NA 9.7607943 9.0659608 10.3661996 6.9273240 11.0305965 8.9602073 7.4014214 13.9465220 10.5816194 10.4133444 12.2719395 10.9497556 9.5700154 3.6979850 TCGA-B6-A409 44 1 573 NA breast stage iiia t1c n2a m0 female 2008 NA no infiltrating ductal carcinoma 6 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 3.81477e-07 8.26580302 8.16871373 10.53645569 6.40222248 8.52186579 7.97993501 6.58534416 11.23587344 12.88954870 13.22048022 10.13769576 10.12419525 0.34698525 12.15931786 2.51687244 11.08037906 7.15751166 8.43307629 8.35256434 7.28357828 -0.06809006 9.72197941 9.38859920 9.99180115 10.01848104 6.79815163 -0.06809006 10.88997183 11.71353542 0.34698525 9.71762742 7.08164960 NA 3.77320516 8.70339179 9.08756414 9.31776488 9.52124159 9.05429906 10.63465234 2.51687244 8.75633081 14.77778452 5.74414495 9.96486658 9.82773012 9.21499076 3.66886797 0.93190994 8.02465988 9.75420774 -0.65312819 10.01803865 4.49668604 4.22958023 6.25982987 9.14945627 11.53351853 10.58922090 10.53738198 11.71980505 9.23568327 10.51435812 10.05989682 10.37864123 9.86608470 2.80636531 10.75924515 9.94499252 2.93190994 10.71844443 9.48840856 5.91223309 3.63233802 8.87050189 9.10349633 10.12131528 9.76003893 2.04736389 7.36374843 12.33455928 12.27758492 9.24554130 9.45088338 0.217100 1.170200 1.673000 -0.261830 -0.273340 0.287820 0.594260 0.444220 0.386950 -0.376590 0.221100 1.882500 0.625830 -0.254080 -0.259420 0.089809 0.089809 -0.312980 -0.273060 -0.280280 -0.259060 -0.249620 -0.205370 -0.205370 -0.226710 -0.169840 -0.212590 -0.210850 1.806800 -0.291570 0.217100 -0.029872 -0.261830 -0.271800 0.285120 -0.271970 -0.271970 0.444220 0.340100 -0.279450 -0.079780 0.347740 -0.376590 0.079085 0.079085 0.079085 -0.496450 -0.254080 -0.254080 -0.259420 0.089809 0.089809 0.089809 -0.312980 -0.273060 -0.228250 -0.264840 -0.259060 -0.264970 0.570180 -0.101090 -0.205370 -0.343410 -0.169840 -0.212590 0.240890 0.271070 -0.133970 0.618 0.364 -0.259 0.000 -0.273 -0.273 -0.280 -0.259 -0.265 0.000 0.524 -0.205 -0.205 -0.337 -0.337 -0.213 -0.213 0.774 0.774 0.241 0.241 0.271 -0.132 0.219 0.000 -0.262 -0.262 -0.026 0.236 0.594 0.414 0.444 0.340 0.000 0.348 -0.155 0.221 -0.496 -0.496 0.000 0.000 0.618 0.364 -0.259 0.000 -0.273 -0.273 -0.280 -0.259 -0.265 0.000 0.524 -0.205 -0.205 -0.337 -0.337 -0.213 -0.213 0.774 0.774 0.241 0.241 0.271 -0.132 0.219 0.000 -0.262 -0.262 -0.026 0.236 0.594 0.414 0.444 0.340 0.000 0.348 -0.155 0.221 -0.496 -0.496 0.000 0.000 7.3069421 12.7435448 1.6688907 9.5049185 3.2653319 11.9973186 0.9319099 9.6772966 9.4350658 7.9542702 6.9431302 8.1750764 9.1478399 10.9810704 9.3363345 5.2538305 6.7898831 10.2064747 5.8626398 10.8746614 9.2210145 5.7392568 10.9106130 0.9319099 9.0042584 9.8675586 4.1018265 NA 10.5966461 1.5168724 13.3683538 12.5554792 7.4890467 10.1064121 9.0993207 10.2033655 2.6688680 1.8063653 NA 3.5948710 8.8655932 11.1881111 5.6598218 4.5367616 9.5590046 10.3199198 9.9044037 5.3242202 10.4950987 8.5984225 11.4912796 1.5168724 1.9319099 10.2945440 7.5989428 4.5948650 9.1051631 6.4915982 7.5017584 9.5305753 13.7558004 0.3469852 11.7305093 4.3469427 10.3270796 4.7044902 8.5745561 8.9262560 12.165806 7.613727 8.868540 12.159318 9.104330 12.224799 7.283578 10.105996 8.623064 9.191646 13.159719 11.747819 8.024660 9.062902 4.455465 6.965326 11.317765 9.758451 4.870503 9.224991 9.060327 7.521866 9.109646 6.223457 6.700087 10.137696 6.760568 3.346943 9.319920 9.590227 12.590412 9.383800 7.730644 9.740330 4.369306 5.506811 9.833006 9.317765 10.251575 10.467178 10.532125 12.628363 9.439697 7.481366 NA 9.859508 5.668868 10.018039 4.074856 9.256083 9.149456 8.025117 14.493608 10.345883 10.310197 11.698155 11.942780 8.218845 1.806365 TCGA-B6-A40B 76 0 NA 3152 breast stage i t1b n0 (i-) m0 female 2005 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 2 NA NA 1 2 2 4 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 9.3130288 8.7811426 10.6528431 7.4774604 8.4003210 8.5333465 9.9408894 9.4513238 11.1030709 9.2918285 12.0557162 10.0101153 6.6868437 13.5725969 2.2628240 10.3513407 7.7024408 8.0701725 9.8612422 13.1212648 2.6778465 13.9629970 6.5408022 10.1566528 10.5955254 8.2170135 0.3559184 11.0329219 10.7514610 0.3559184 7.7266140 6.1888163 NA 3.5258559 9.5401823 10.4549458 10.1103968 10.6308873 9.3072115 10.5220899 1.9408809 10.6929912 14.6796677 6.7641723 10.0931742 10.3431908 9.9618693 4.2385729 2.2628240 7.3559272 10.2158498 -0.6440816 10.4159472 4.0838431 5.0563668 4.2139071 9.7079702 11.5272600 10.7057609 12.2897097 12.1547024 8.5308526 10.5414218 10.3123321 10.4483537 9.6924335 3.4433945 11.2646948 11.5887974 -0.6440816 10.5549856 8.3144795 4.8638790 4.1888203 11.2868489 9.6150817 10.1907929 8.5907442 1.9408809 10.1199690 13.6041509 13.2082125 9.7905551 9.5763052 -0.5317100 0.6511200 0.6511200 -0.0417020 -0.0538810 -0.1431600 0.4277200 0.0713460 0.0655300 0.0744080 0.0744080 0.0744080 0.0725400 0.1028300 0.0793560 2.8256000 0.7059500 0.0716780 0.0666900 -0.0506410 0.0799780 0.0988510 -0.0019399 -0.0019399 -0.0111980 0.0995790 0.0995790 0.0995790 0.1006000 -0.4986000 -0.5317100 -0.0518940 -0.0417020 -0.0964400 -0.1431600 0.4277200 0.4277200 0.0801680 0.0744080 0.0655300 -0.0422450 -0.0422450 0.0744080 -0.0353120 -0.0353120 -0.0353120 -0.0353120 0.0884030 0.0884030 0.0873900 -0.5140400 -0.5360200 -0.5360200 0.0716780 0.0666900 0.1010300 -0.0671900 0.0799780 0.0988510 -0.5185600 -0.0019399 -0.0019399 -0.0384710 0.0995790 0.0995790 0.1006000 0.0698120 -0.4967300 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.05983060 14.41755118 7.60385404 10.44703155 1.94088087 11.76757022 1.16330550 0.35591837 8.96325707 8.87457998 -0.64408163 7.33638070 3.64132637 9.94978484 9.81074015 4.79886964 6.68235699 8.98619389 11.55697864 11.08320918 9.28207464 6.68684365 11.00585658 1.16330550 9.34532141 10.00113497 5.83165940 NA 10.66824263 1.35591837 12.22417066 11.86866732 8.12411097 9.61978292 7.40032103 9.87997879 3.56537783 1.81537049 -1.64385619 11.97224594 9.69131728 9.98801331 9.78742447 3.60385775 8.96080446 9.36994735 10.18881691 6.46445100 9.57024603 NA 11.52020531 2.87949013 3.99978358 9.29696712 7.21971064 3.48520783 10.73340849 6.75680581 7.45132405 8.08044075 13.99555018 -0.64408163 10.29880779 -0.05904398 8.53956209 4.48520783 7.62036940 8.91147468 13.395537 5.632050 8.147090 13.572597 9.932817 11.026804 13.121265 10.018150 9.478755 9.768497 14.176505 12.827539 7.355927 9.818429 1.163306 6.765317 11.095497 11.41932193 6.73096595 8.74286720 9.05463145 7.93524286 10.39239589 6.38383214 5.17610731 12.05571616 7.25074466 2.60385775 6.74824385 7.19805700 9.61272514 10.33749413 7.13400423 9.84627642 9.37898818 5.78219099 12.40458399 10.11039678 10.82836382 9.32315319 11.18782786 10.00921979 10.07403158 6.92198133 NA 9.20357926 6.38934998 10.41594717 7.33034148 10.76664319 9.70797025 6.51579759 13.36920590 9.67333947 9.68347944 12.95071796 11.27087252 9.09991978 -0.05904398 TCGA-B6-A40C 51 0 NA 2164 breast stage iib t3 n0 (i-) m0 female 2005 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.467973e-07 9.9119454 9.2276966 11.0688914 8.2802112 8.4369180 9.0456712 10.8297249 9.2164282 11.0533286 11.3237948 8.4896300 9.8962458 -1.8656476 13.1816587 2.6578458 10.2506230 5.8416386 8.7173618 8.9049428 12.2377308 1.3042190 14.6042229 5.7341921 10.4916111 10.0602044 7.1342795 -0.2806851 11.4658497 9.5741100 2.8891620 9.0598336 6.0650165 -1.8656476 3.8067056 9.3684977 10.2160954 9.4796843 10.6761017 9.1773064 10.5410156 8.8347188 10.3910775 15.1083015 8.3989211 10.3783456 10.9466570 10.2074164 5.1229626 6.9608279 8.1621849 10.6400906 -1.8656476 10.4508435 6.4104039 6.1895617 4.6578400 10.2000317 11.5764451 10.8332007 11.4792685 12.3669998 8.8433630 10.6087456 10.4905384 10.4934796 10.9693426 4.5265947 10.8491685 11.4458855 -0.8656476 10.4609895 9.1286326 5.0456133 5.2532216 11.1971685 9.8493830 10.5761858 9.4225684 4.8485228 7.7154795 12.2986361 11.5997179 9.9160486 9.8630500 0.97807000 1.39070000 1.40360000 -0.00266380 -0.01962100 -0.00473940 -0.00598370 0.66619000 -0.71339000 -0.01122900 -0.66191000 0.64648000 0.01606200 0.01606200 0.00191010 0.00191010 0.00191010 -0.01005900 -0.01005900 0.00844260 0.01137400 -0.66635000 0.02690300 0.02690300 0.02690300 0.06850800 0.07955800 0.07955800 0.02479700 0.05092900 0.00010706 0.01849100 -0.00266380 -0.00473940 -0.01736600 -0.00598370 -0.00598370 0.66619000 -0.71339000 -0.71339000 0.05662300 0.04638400 -0.69389000 0.00621640 0.00621640 0.00621640 0.00621640 0.01606200 0.02255300 0.00000000 0.00191010 0.00191010 0.00191010 -0.01005900 0.00274290 0.00274290 -0.00881470 0.01137400 -0.66635000 -0.66931000 0.02690300 0.02690300 0.02143100 0.06850800 0.07955800 0.02479700 0.01304200 -0.65847000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 0.000 8.6859874 14.1492367 8.9392169 9.9416340 1.6325474 11.0888390 2.8891620 0.1342209 9.5885784 8.8782720 1.1342867 8.3828708 4.1786748 9.8031641 9.8929187 5.4471626 7.5436699 9.1779900 6.8858233 11.1040254 9.5050481 7.3558664 11.5525270 3.4196872 9.6666350 9.8660224 3.9922609 NA 11.0605751 3.7192382 12.6832214 12.0958192 7.4918315 10.0130964 8.6984286 9.6361163 5.1342784 0.7192273 -1.8656476 7.3582811 8.9303187 9.9934256 10.1649463 5.3822073 8.3968321 8.7763307 10.6445488 8.4173673 9.6170870 NA 11.2512728 3.3822107 4.0650122 9.4041947 6.5923165 5.3141890 10.0138624 7.1058226 7.6984283 -0.2806851 13.4575802 0.1342209 10.2528958 -0.2806851 8.8621997 4.6734377 7.4674344 8.4208369 11.143333 5.979769 8.379832 13.181659 10.016735 11.030801 12.237731 10.463515 8.924416 10.063907 13.028434 11.135863 8.162185 8.050158 2.834711 7.591660 10.168390 11.2757476 7.5244477 8.7853308 9.1335746 8.8908355 10.5345208 7.7889154 6.5937108 8.4896300 7.0441722 -0.2806851 5.8757457 7.6708956 10.1325170 9.7695438 7.9221818 10.0260628 9.3570740 6.3241031 10.9534284 9.4796843 10.5665600 10.6919821 10.6573510 11.1293396 10.6208628 8.1868472 NA 9.7492282 6.3630975 10.4508435 7.3869446 11.2640451 10.2000317 7.5438400 13.9720302 10.1545646 10.2969851 12.3552619 11.4609895 10.2286867 2.1342867 TCGA-BH-A0AU 45 0 NA 1914 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 1 1 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.080784e-07 10.1779097 9.7513991 12.3503927 9.9113866 8.3478973 8.8336093 10.4242687 9.8583682 9.3989367 13.6229641 11.0742333 10.5637091 1.8520388 13.3260015 3.0999684 8.3458975 7.4850371 8.8250220 8.0443351 12.4785497 1.1739589 13.4285265 4.2443619 9.3001585 11.8592446 8.0736291 -0.1480012 8.9208203 7.8378840 3.3114741 7.8576669 7.1328133 NA 4.4066319 10.1941167 10.8385952 10.7619352 9.9566409 9.8909611 11.7164217 2.9395087 10.9001884 14.7229847 9.3877938 10.1472371 12.3804962 12.1446513 5.7346852 5.7100239 9.6553660 10.5044390 NA 11.4947707 6.1374441 6.4740937 5.3912006 10.3608272 11.6196059 11.3254942 12.3221925 12.7253901 9.1694548 11.1663421 10.3247330 11.4660617 11.3677420 5.3438946 12.1779097 12.0017892 NA 10.5926661 9.1141369 3.4423995 4.7100239 10.0999696 10.3408865 10.6448324 11.3573575 2.1739589 9.9683861 12.6991974 11.3158219 10.6845366 9.0467991 -0.355330 0.539420 0.539420 0.267340 0.249650 0.256210 0.418980 -0.377970 -0.377970 0.481310 -0.159110 0.735680 -0.381230 0.208700 0.257150 0.257150 -0.376170 0.252150 0.252150 -0.046312 -0.364080 0.214530 0.264980 0.264980 0.264980 0.242640 0.242640 0.242640 0.875470 -0.070882 -0.355330 -0.063435 -0.385600 0.256210 0.246400 -0.370080 -0.370080 -0.377970 -0.377970 -0.377970 0.256210 0.236010 0.481310 -0.377970 -0.377970 -0.377970 -0.377970 0.208700 0.208700 0.257150 0.257150 -0.376170 -0.396250 0.252150 0.252150 0.252150 -0.046312 -0.364080 -0.369400 -0.767240 0.264980 0.264980 -0.047124 -0.409920 0.242640 0.266710 -0.347900 0.256210 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 0.000 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 0.000 9.4037504 13.8515137 9.9408304 9.7596840 4.6365434 10.0778521 1.4370146 -1.1478413 8.4085480 8.2073931 3.3114741 8.0772734 3.8964366 10.4745515 9.2783068 3.4370013 8.7768548 9.9683861 10.3741332 9.9295255 10.1474610 8.1489585 9.4986009 1.8520388 8.6943924 9.6366770 3.2443543 -0.1480012 10.9599131 4.0219682 11.8196286 12.3973686 8.2635533 9.4602970 8.6880926 9.6545585 5.3912006 0.4370146 0.8520788 5.7100239 10.2741068 9.5084671 9.6448324 5.0614954 9.3496943 5.4813991 10.0331943 6.2529208 9.9181313 NA 10.4931907 3.3114741 3.4370013 9.8827506 6.7863232 5.6334021 8.6912459 8.0712108 10.3746236 3.0219594 13.1655629 0.4370146 10.5275581 NA 7.6690261 4.7827807 8.5191538 9.1409082 14.074168 7.041867 9.481399 13.326001 9.944443 10.938510 12.478550 12.977859 8.719321 11.175941 13.184428 10.512038 9.655366 8.233585 2.173959 7.402789 11.692820 11.079959 7.764931 8.284584 8.928858 9.531522 9.632803 6.659397 5.041865 11.074233 6.235746 5.939504 5.311474 7.225952 11.129911 9.881329 9.974223 9.456595 12.474208 6.991593 12.864456 10.761935 10.138022 10.824304 10.921156 9.367742 10.521813 9.094025 2.552475 8.752864 7.031951 11.494771 8.272002 10.166059 10.360827 7.367742 12.581663 10.091641 9.840727 12.947934 10.144364 9.341890 1.659377 TCGA-BH-A0AV 52 0 NA 1820 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 black or african american NA 4 4 4 NA 2 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 4.855162e-07 9.6765469 9.7197025 11.7714773 9.9124912 8.9255022 9.1286947 8.0218461 10.1569752 11.4424645 12.5287801 11.5985525 10.3238797 2.1260808 11.7840327 3.0695131 11.7217121 5.7017819 8.2281727 11.0087390 6.1872075 NA 6.1399012 9.2632842 9.3452644 11.3499120 5.7202757 -1.5743259 8.4887950 10.8683406 3.3798566 7.9840772 8.3696362 2.8850862 6.0550134 9.3332980 10.6033872 9.4910724 9.3740235 10.6789129 10.5273037 -1.5743259 7.3856580 15.7326435 8.6487530 9.8044929 10.8958067 11.0325241 4.5131180 NA 9.5523607 10.2797454 -0.5743259 11.2958283 7.5131188 6.6640604 5.6448254 8.8602844 11.9200118 9.7854059 12.9133707 12.9636632 7.9054363 11.5750859 11.3807140 11.6924428 11.3424687 5.3798531 11.5510697 10.0185803 -1.5743259 10.6715060 10.2526019 2.7533478 5.3914412 11.9743578 10.6944907 10.6499595 10.3925221 4.1805457 5.9648145 13.0493092 12.2887778 10.3117338 10.0918803 0.0421660 1.6943000 0.4971800 0.1580100 -0.4589600 -0.5071200 1.3088000 1.1744000 0.2477800 -0.4915200 -0.4915200 0.3952900 0.0793350 -0.4640800 -0.4822900 0.1647500 0.4243500 0.9750200 -0.4884800 0.1713600 -0.0062286 0.6862600 -0.4430700 -0.4430700 0.0784380 -0.4336600 0.0406090 0.0715350 -0.4901600 -0.4740600 0.0515300 -0.4692900 0.1659300 -0.0069195 -0.5306300 -0.5153200 -0.5153200 0.5480600 0.2477800 -0.0084385 0.7124600 -0.4928700 -1.2208000 0.4775300 0.0022193 0.0022193 0.0434400 -0.4640800 -0.1773000 -0.4822900 -0.4703500 -0.4970500 -0.4970500 1.0038000 -0.4884800 -0.4884800 -0.4969500 -0.4404800 -0.5187700 0.8354900 -0.4848900 -0.4430700 -0.0478010 -0.4336600 -0.4377800 -0.4780200 0.3800600 0.0214630 0.000 -0.124 -0.482 0.000 0.853 -0.488 -0.502 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 -0.611 0.000 0.000 -0.124 -0.482 0.000 0.853 -0.488 -0.502 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 -0.611 0.000 8.5842658 14.7490101 4.1260973 10.1347401 2.9492174 12.7165391 -0.5743259 7.4535620 7.7743845 9.4514879 9.3482406 10.2916253 5.0106187 10.6384565 8.6544749 4.3325504 7.2522046 9.9084642 6.9452928 9.0124960 9.9930801 7.9802453 11.7264378 1.4256741 7.1535764 10.2462341 9.2289803 -1.5743259 10.2135588 1.8851058 12.5865519 12.1527258 8.4480242 10.4710746 9.2086545 9.5523607 5.6154810 3.4256607 NA 0.4256741 7.5471899 7.6302271 7.2135592 8.2695774 8.3495334 5.5236874 9.3362990 6.2200726 9.8524451 2.1260808 11.0858750 3.8850862 3.4700552 9.1050749 7.7379720 5.2330099 9.6777302 7.9725508 6.6055654 3.0695131 13.6638744 -0.5743259 10.1909423 NA 9.0820812 4.1260973 8.5918193 7.9648150 11.271577 7.781008 7.854016 11.784033 10.174268 10.924256 6.187208 12.772031 10.044501 12.433297 14.223571 11.090326 9.552361 8.400071 1.010637 9.424952 10.781833 11.61918161 4.35639034 9.48025381 8.44802418 5.88508867 10.51764695 5.47005198 3.71105432 11.59855247 10.08698898 0.74760223 8.26012730 9.56755895 13.82393232 10.73171792 7.90341432 7.95508667 10.10821197 5.60556545 9.13484341 9.49107243 9.90745569 9.14931729 12.26397382 11.50813798 11.09830256 9.56072412 NA 9.46433520 6.16036560 11.29582827 9.37110011 10.37402343 8.86028436 7.68068513 14.32539079 9.86392823 10.17217058 13.07939703 10.45321671 9.76439260 0.01063664 TCGA-BH-A0AW 56 0 NA 622 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white NA 6 3 4 1 NA NA 2 6 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.259895e-06 1.24847e-06 9.7294447 9.4513278 11.4559854 8.4824789 9.5720883 9.4836197 9.4278115 10.7284826 10.1609785 13.9469857 9.2420930 10.5334983 0.7636665 16.9531183 3.0855946 8.7878768 5.2010653 8.1758773 6.0975602 11.9298235 NA 11.8888586 2.9860468 9.4728133 10.1744651 6.7786107 1.7636665 10.5040034 11.7267974 1.1786828 8.5902090 7.5450201 2.8791372 6.3385688 8.9302421 10.1878267 9.3881514 9.6775472 10.0697222 10.5774417 15.0135887 10.0327871 14.6718654 6.7335943 10.1566933 10.4836196 9.6154095 4.6381318 7.2819856 8.7275199 10.8821690 0.1787465 10.8700053 6.3881516 7.7409404 6.1559779 10.1502416 11.8509023 9.9032118 10.8112388 12.5787769 6.6625132 10.6039138 9.0647907 10.8581780 10.7966245 3.5710214 11.5323962 9.7664754 1.7636665 10.1072163 8.8581781 0.7636665 6.3486237 10.7837144 9.8216522 10.3124824 9.5667153 2.9860468 9.0413353 12.3688313 11.9258419 9.3746852 9.8938019 0.1622000 0.8467200 0.8467200 -0.0053992 0.3393400 2.0957000 0.3499000 0.3438800 0.7894800 -0.0049844 -0.0049844 0.6952100 0.2100800 0.0088920 -0.0114730 -0.0114730 -0.0114730 -0.0096806 -0.0096806 0.0000000 -0.1216100 -0.0140900 1.1516000 3.6569000 1.0806000 -0.0393940 0.2839000 0.2374800 0.9403700 0.1280000 0.1622000 -0.4065000 -0.0053992 -0.4074900 0.2449800 -0.0258010 -0.0258010 -0.0250720 -0.0538810 1.0270000 0.7750200 -0.0139530 -0.0049844 -0.3866000 -0.3711000 0.0000000 0.0000000 -0.3889500 -0.4565200 -0.1021100 -0.0114730 -0.0041546 -0.0041546 -0.0096806 -0.0073339 -0.0085766 -0.3563500 -0.1216100 0.0146090 -0.3682700 -0.3833600 -0.7359100 0.7296200 -0.0393940 0.2374800 0.7122700 -0.0200010 0.0213230 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.314 0.000 0.033 0.417 0.000 0.000 0.000 0.237 0.847 0.847 0.712 0.335 0.000 0.000 0.320 0.320 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 0.112 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.314 0.000 0.033 0.417 0.000 0.000 0.000 0.237 0.847 0.847 0.712 0.335 0.000 0.000 0.320 0.320 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 0.112 10.0506032 12.7031173 3.5006236 8.7159164 6.4824789 12.1299827 2.9860468 NA 8.9747375 8.3208051 NA 8.3183006 2.8791372 11.0218338 8.9551309 4.6381318 10.1934158 9.9575964 11.0190825 13.0366789 9.2291998 6.6943983 11.2790318 2.7636665 7.6340254 9.5504746 3.2661569 -0.8213810 12.4030012 0.7636665 13.7875880 12.7296852 8.5073729 10.3156891 8.7217298 10.4236563 2.6381202 3.2661569 NA 1.5006491 8.7786107 10.6800375 11.2591824 4.8225517 8.9312960 6.9335856 9.9567751 6.1786987 10.6899565 -0.8213810 9.5817100 3.7022586 4.4266271 10.0592535 7.3705471 7.1153361 9.7071520 9.4536585 9.9252123 5.4266271 14.2427249 1.9860468 10.8673854 NA 9.4927146 5.7485525 8.6584782 8.3905864 10.548295 6.771155 9.682524 16.953118 9.895937 11.289834 11.929824 8.680535 8.752345 10.096816 12.912561 9.058281 8.727520 8.995682 2.178683 8.175877 11.541190 10.898942 3.348629 8.818925 9.137251 6.940249 10.118813 8.206604 6.545020 9.242093 7.011588 -0.821381 8.195506 6.995938 11.634796 11.044431 7.178698 9.876534 9.961696 8.244787 10.064280 9.388151 10.443141 9.835123 10.606535 9.849354 10.295692 8.787877 -0.821381 9.208289 7.882601 10.870005 7.212121 10.975549 10.150242 7.531845 14.303425 10.732327 10.777681 11.574232 10.873056 8.721730 3.500624 TCGA-BH-A0AY 62 0 NA 777 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white NA 8 2 5 NA 2 2 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 9.5188382 9.3864536 11.7588269 8.9321654 8.7533889 8.2775194 10.1868326 9.3045425 10.5222528 12.2875870 10.1414799 10.4202485 0.3827226 11.8216666 1.1196882 9.7358484 5.1727795 8.0023104 8.1706041 12.5672670 3.6050913 13.8223593 7.3330140 9.6634724 10.7508441 5.3368975 -1.2022399 9.9443077 10.6091137 NA 8.7151112 6.5119850 NA 4.6306268 9.4657376 10.1083518 9.2875870 9.4894825 9.4179588 10.6596014 6.0645251 10.2627952 15.0204396 6.4126698 10.0120581 11.0223437 9.8712111 4.2571691 0.7977601 8.3675947 10.4465459 -1.2022399 11.5782788 5.7166014 5.2571691 6.2323672 9.8772238 11.6149226 10.5396273 11.4615195 12.2138768 7.4013651 10.7562917 9.9003971 10.6091137 10.6095151 3.8852034 11.4431723 10.2905936 1.9676482 10.5492831 9.4833638 2.2571615 5.6557210 10.8349427 9.2386082 9.8208003 10.2749913 7.9166803 8.7850032 13.2306723 12.6499759 10.1591345 9.9023377 0.0000000 0.6286100 0.6385800 -0.0340860 -0.0439160 0.2793100 -0.0487480 0.3292200 0.2906200 1.5248000 1.5248000 2.1505000 0.3228600 0.3228600 0.3069700 0.3069700 0.3069700 -0.0212350 -0.0212350 -0.3922100 -0.0168410 -0.0015243 -0.3187900 -0.3187900 0.3713400 0.0688080 0.0421660 0.0421660 0.3721600 0.0000000 0.0000000 -0.0075380 -0.0340860 0.2793100 0.2793100 -0.0487480 -0.0487480 0.3292200 0.2906200 0.2906200 0.9403700 -0.0276710 -0.3756100 0.2921900 0.2921900 0.2921900 0.3445300 0.3228600 0.3228600 -0.3442300 0.3069700 0.3040900 0.3040900 -0.0212350 -0.0212350 -0.0212350 -0.3797700 -0.0168410 -0.0015243 -0.3298200 -0.3187900 -0.3187900 -0.0269880 -0.2887600 0.0421660 -0.0129890 0.3285000 -0.2965000 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 0.156 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 0.156 8.6940716 13.6986058 8.1174109 9.9819945 2.8852034 11.0202321 1.1196882 1.7977186 8.1286558 8.0923597 NA 8.5200686 3.8421341 10.4129088 8.7935061 3.9270241 9.1943437 9.2694143 10.3499277 11.3144240 9.0977024 7.1241689 11.6599889 3.4981743 8.0480372 9.5848254 3.2571766 NA 10.9270221 1.1196882 13.5943364 12.1128886 8.5119847 9.7835809 8.4325503 9.3005708 3.3826949 2.3826949 NA 6.9525572 8.3939288 10.1596828 9.5196927 6.7284770 9.4148759 8.0598338 9.8931360 6.1375896 9.4938372 NA 10.7832252 0.7977601 2.9676666 10.3082016 5.9767531 2.7046285 9.9943411 9.1932733 8.7835811 0.3827226 13.6967654 3.0456701 10.4563968 NA 9.1286558 5.9875642 7.8825477 8.6353670 12.0765224 5.0456658 8.8201068 11.8216666 9.7913851 10.7750189 12.5672670 10.8044157 9.1706041 10.1938086 13.0936514 10.5320253 8.3675947 8.3732784 0.3827226 6.8957716 10.7076321 11.454387 5.352328 8.728476 9.034949 7.728476 11.116576 6.505099 8.279539 10.141480 6.937290 2.382695 4.655718 5.574108 10.614723 10.507254 8.621106 8.432550 10.422078 5.916680 10.394110 9.287587 10.550956 10.215064 11.066281 10.290594 10.654943 9.235491 5.977649 9.487091 1.967648 11.578279 7.919273 10.431188 9.877224 7.045667 14.005935 10.234971 10.351368 12.406918 10.567577 9.111756 2.382695 TCGA-BH-A0AZ 47 0 NA 1919 breast stage iiia t3 n1a cm0 (i+) female 2008 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 2 3 2 4 3 3 2 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 4.161568e-07 10.30434505 10.23720482 11.37554114 8.92013666 8.87078421 8.61099491 9.39184010 10.25031772 10.73582558 13.26176493 9.92156293 10.72074856 4.18650056 12.53999200 3.89276987 10.54959419 6.28729682 8.26274978 8.86486554 12.61771957 NA 14.10861180 3.98296620 9.66694916 9.87299739 7.66648961 NA 11.40030464 11.06817441 4.10849100 7.65966844 7.96370877 -0.06145073 6.12839446 9.43941121 10.12592149 10.21527538 9.24120834 9.75954602 10.37788085 2.84546998 9.98159668 15.15165463 8.05504323 9.90291033 11.31442339 11.27953218 5.34795969 5.34795969 9.21585669 11.87041493 -0.06145073 11.42364398 6.73946875 5.86930636 5.02603425 9.83338712 11.63727405 10.77264539 13.02021927 12.48703010 9.17458369 10.79031844 10.23879605 11.02105110 11.06913998 4.36483153 11.56974645 10.17338682 -1.06130019 10.51505373 9.07427877 3.02603868 5.55328062 10.49507542 10.27897591 10.42036881 9.39492373 2.84546998 7.97748830 13.09473150 11.79265858 9.50367152 9.88693662 0.01321300 0.35904000 0.46246000 -0.00995650 -0.00526100 0.00350010 0.01726400 -0.00360110 -0.00539920 -0.48680000 0.00819590 -0.00069303 0.00388540 0.00388540 0.00013863 0.00013863 0.00013863 -0.49329000 0.00360760 0.05281000 0.01195800 0.44715000 -0.01931400 0.37613000 0.44088000 -0.04492400 -0.04492400 -0.04577000 -0.00318590 -0.02494600 -0.46057000 -0.00193990 -0.50162000 -0.49287000 0.00350010 0.01405100 0.45292000 -0.00360110 -0.00097017 -0.00734800 0.46724000 -0.48314000 0.03242200 -0.46142000 -0.46142000 0.00000000 -0.01697900 0.00388540 0.00388540 0.00013863 0.00013863 -0.47455000 -0.47455000 -0.49329000 -0.00802440 -0.00802440 -0.46203000 -0.48596000 0.01628600 -0.49225000 -0.01931400 0.37613000 -0.46837000 -0.04492400 -0.04492400 -0.00318590 0.00569190 0.49130000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.376 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.376 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 0.000 10.07171159 14.60654023 7.53102659 10.73785100 3.89276987 10.89203835 0.52356196 0.52356196 7.74914136 9.49027770 NA 8.98883974 3.89276987 10.41632770 8.92725411 2.39799458 9.35958222 9.56336485 9.52540923 10.74873938 8.87032619 7.21003228 11.94822310 3.93721255 8.21003228 10.52494009 3.26049242 NA 10.64894533 3.02603868 12.81451069 12.61265129 9.20301195 10.38203105 8.42439853 9.65538886 5.46213087 1.74592570 -1.06130019 4.10849100 8.29392037 8.81508640 9.25485100 5.44636542 7.21873662 6.06785165 9.83035310 6.33088641 10.03725948 -0.06145073 11.42841733 1.74592570 5.22397079 9.32713561 6.25516835 4.74592570 10.47869743 8.65109655 7.39800142 -1.06130019 13.88903416 1.74592570 10.81700354 NA 8.47772832 6.63900926 8.11598883 9.25598194 13.37744895 5.86930636 8.69512561 12.53999200 10.68718162 10.65023636 12.61771957 12.63358013 9.01734739 10.24861405 12.81987459 9.78797453 9.21585669 8.70012063 -0.06145073 7.50462357 10.95920214 11.391325 5.610995 8.619808 8.855941 8.072996 10.020565 6.739469 7.531027 9.921563 7.269487 4.610995 7.157738 5.529231 12.472021 10.376321 9.192417 8.729732 11.182933 6.438416 11.750793 10.215275 10.661804 9.967857 10.990798 10.627694 10.949797 8.934337 NA 9.129320 6.589621 11.423644 9.747534 10.650740 9.833387 6.839436 13.730546 10.436920 10.286191 13.027358 10.307621 9.426409 3.523537 TCGA-BH-A0B0 56 0 NA 2477 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 black or african american NA 8 2 2 NA 2 4 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.179111e-06 4.508365e-07 9.499184 9.470071 11.793175 9.063133 8.023605 9.451466 10.515153 8.922842 10.368704 12.759368 10.240589 10.378585 4.424835 11.958017 2.424841 9.635040 6.167340 8.025893 10.130070 12.858021 NA 13.241636 9.430893 9.611176 10.223246 8.911749 NA 11.028748 9.511483 3.768788 9.563601 7.375449 NA 4.701677 10.189453 9.757820 9.261615 10.516781 9.840091 10.961308 NA 9.434342 14.680228 7.801774 10.086341 10.649209 10.287593 4.582375 3.768788 8.599378 12.339567 NA 11.124476 5.396824 6.081949 5.724397 9.568318 11.696659 10.403437 12.049983 12.682315 7.785093 10.950508 10.391952 10.943263 11.042940 4.009795 11.479076 11.087984 1.046351 10.556891 8.945984 3.632245 5.116714 10.841391 9.732826 9.648467 9.274182 5.009800 11.399251 13.039688 12.273339 10.119395 10.040678 0.00402430 0.52923000 0.52923000 0.00805670 0.00805670 -0.54653000 0.00569190 -0.55872000 -0.54955000 0.00374650 0.00374650 0.00374650 0.00680440 0.00680440 -0.00384900 -0.00221680 -0.00221680 -0.01876500 0.01111700 -0.01986300 0.00249690 -0.00110870 -0.54643000 -0.54643000 -0.54643000 0.01670500 0.01670500 0.01670500 -0.01161100 0.00402430 0.00402430 -0.00899060 0.00805670 -0.54653000 -0.54653000 0.00569190 0.00569190 -0.55872000 -0.54955000 -0.55908000 0.01349200 0.00591790 0.00374650 0.00027728 0.00027728 0.00027728 0.00027728 0.00680440 0.00680440 -0.00384900 -0.00221680 -0.00221680 -0.00221680 -0.01876500 0.01111700 -0.55507000 -0.50443000 0.00249690 -0.00110870 -0.55573000 -0.54643000 -0.54643000 -0.01381500 0.01670500 0.01670500 -0.01161100 0.00291330 -0.55497000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 -0.114 9.4161405 13.8934215 6.1167141 10.4012355 5.3219281 11.0844210 3.1167141 NA 8.7229875 9.6800469 NA 7.9794258 5.9240690 10.2664614 9.2625858 3.5317557 9.6342900 9.4360640 11.0937217 10.2557784 9.1671850 7.3718550 11.8586628 3.1167141 8.6551343 9.9900120 3.8943230 NA 10.4437858 1.8943327 13.7723302 12.7290563 8.7412051 9.7016769 10.1396106 9.2041772 1.8943327 1.0463514 -0.2756117 7.7687911 8.3243097 9.9788351 10.6923436 6.4725901 7.3682533 6.5761457 9.7516118 5.6551343 9.1538036 NA 11.1917478 3.7243993 3.8943230 9.9253568 7.4746680 4.5572875 9.3008813 8.3074795 6.7467642 NA 14.0235334 2.5317433 10.3013536 NA 7.8690552 5.5698860 7.7467649 8.3298766 13.0318112 5.0819489 7.5445758 11.9580166 10.5057567 11.1498751 12.8580208 11.4890612 9.1548495 10.6256410 13.2631315 9.1124142 8.5993784 9.2548033 0.7243883 6.5636005 11.1290063 11.430245 5.294253 9.303713 8.314984 6.879216 10.393951 6.981785 8.277066 10.240589 7.960411 3.183836 5.863948 5.736407 10.657719 10.734226 7.335422 8.815832 11.292353 7.403877 10.680334 9.261615 11.075888 9.861388 10.587034 9.897449 10.943868 9.153804 1.046351 9.805627 6.324310 11.124476 8.641769 10.268709 9.568318 7.138025 14.003754 10.821771 11.128208 12.249183 10.505347 9.541380 2.811861 TCGA-BH-A0B1 66 0 NA 1148 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white NA 2 3 NA NA 3 2 1 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 4.161568e-07 10.2773549 10.5550405 11.8312341 9.4452092 8.9020449 9.3120173 10.1200968 9.7342251 9.1773861 13.7167246 11.3755040 10.7517885 0.5756028 12.4599767 3.8975406 9.7310661 4.0018833 8.9732898 8.8782542 12.5847441 3.2760499 13.2364469 7.1340361 9.6164941 11.9545875 8.1605779 -0.4243004 7.8992554 12.1714555 1.5756028 7.7228205 7.9353649 2.5756270 4.6630770 10.0868738 11.1759929 9.8935932 10.1196137 9.3371665 11.6258041 1.1605975 10.7823244 14.1904402 8.6585628 9.6945499 11.9350904 11.5118852 4.0991774 -1.4243004 9.3659639 12.0273416 NA 11.3325886 8.0247640 5.0834091 4.7455385 10.5582524 11.8375633 10.4471356 12.2270034 12.9036591 7.8092350 10.8958518 10.3800731 11.9218520 11.0475445 5.2194706 11.7531906 9.2013241 1.5756028 10.0599348 11.3231790 2.5819056 4.8610174 10.1369032 9.7093997 10.0442393 11.6315756 2.8975502 8.5742056 12.0600606 11.3720606 10.2436139 9.0734671 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.0060680 13.3603524 9.2932918 9.5471589 3.1605814 10.2958596 0.1605330 -1.4243004 8.7189986 9.3569750 NA 8.3504022 2.7455385 10.3602501 9.0674685 1.5756028 8.7959935 8.9042902 7.8862282 10.6929337 9.4073738 8.0913153 10.8587037 1.8975502 8.9473921 9.5261711 4.7455385 -0.4243004 10.2751877 2.7455385 11.7956913 12.7993154 8.7228202 9.9149086 10.5184963 9.2471564 3.1605814 -1.4243004 NA 4.7048996 8.3925991 9.4696752 10.8825314 5.3957929 9.0343500 6.9154659 9.9221290 6.5414002 10.0442393 -1.4243004 11.0281140 2.1605653 4.6417021 9.8205916 3.6256796 3.1605814 10.2226239 7.5586090 5.7752876 5.8702365 13.4444861 1.5756028 10.4355383 0.1605330 6.7455399 5.9850062 8.7555246 7.4613116 14.147924 5.018559 8.611789 12.459977 9.492987 10.389397 12.584744 12.296073 9.259487 11.532899 13.077888 10.605938 9.365964 8.857545 -1.424300 7.099177 11.939887 10.670683 4.684140 8.963632 8.810433 9.403752 9.631460 5.609037 5.289860 11.375504 6.980757 2.035061 5.001879 7.865035 10.617959 9.437478 9.752412 8.376515 12.186063 4.408508 10.816022 9.893593 9.919911 9.361885 11.309690 9.500428 10.107484 9.032996 -1.424300 8.632754 5.083409 11.332589 7.417966 9.731066 10.558252 6.879396 13.350094 10.176457 10.266923 13.088973 9.465880 8.743034 -1.424300 TCGA-BH-A0B2 43 0 NA 1242 breast stage i t1a n0 m0 female 2007 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 6 1 1 NA NA 4 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.3779700 0.6592300 0.7013900 -0.0347680 0.0000000 -0.0990480 -0.0038779 0.0072448 0.0038907 1.6657000 1.6657000 1.7989000 0.0241270 0.0241270 0.0106510 0.0106510 0.0106510 -0.1586000 -0.1586000 0.0308730 0.0290440 -0.1085400 0.4854400 0.0241770 0.0241770 0.0754150 0.0754150 0.0754150 0.0150280 -0.4312700 -0.3779700 -0.2955600 -0.0226060 -0.0990480 -0.0575200 -0.0038779 -0.0038779 0.0394780 0.0072448 -0.4857500 -0.4588600 -0.4793400 -0.4815500 -0.0388500 -0.0388500 -0.0388500 -0.0388500 0.0241270 0.0241270 0.0276380 0.0106510 0.0106510 0.0106510 -0.1586000 -0.1586000 -0.1586000 0.0019418 0.0290440 -0.1085400 -0.4787300 -0.4455500 0.0241770 0.0256710 0.0754150 0.0754150 2.0050000 -0.0306770 -0.0469640 0.000 0.000 0.000 0.000 -0.159 -0.159 0.000 0.000 -0.109 0.000 -0.477 -0.433 0.000 0.000 0.000 0.000 0.000 -0.378 0.281 1.990 0.000 0.000 0.000 -0.132 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.487 1.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 0.000 0.000 -0.109 0.000 -0.477 -0.433 0.000 0.000 0.000 0.000 0.000 -0.378 0.281 1.990 0.000 0.000 0.000 -0.132 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.487 1.666 0.000 0.000 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-BH-A0B3 53 0 NA 1203 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 2 white NA 4 4 4 5 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 8.323135e-07 2.427581e-07 9.2690093 9.2877401 11.3527178 9.3348172 8.7076432 9.0659382 9.0996453 9.9889976 12.0087553 12.5782232 9.8780098 10.4382359 0.6188964 12.0944619 1.4262111 11.1724844 6.5495922 8.4100179 8.6412230 6.9631516 NA 11.5399522 9.6883049 10.3962707 11.5835569 7.6929962 2.7063095 12.4868287 11.1604358 3.2038119 7.5613697 8.4213714 2.3193000 6.7937802 8.8512759 9.8349946 9.5272477 9.7364982 9.1934487 10.6618824 6.1187003 6.6018480 15.8831694 8.4189299 8.4674780 11.7555258 10.3505984 3.0782853 NA 9.4799419 11.0700662 NA 9.5591687 5.0945866 6.7987647 6.1962844 8.1167068 11.7355240 10.2739386 11.3382439 12.7920637 8.1443758 11.3741600 10.6055362 11.3563137 11.0247943 4.7063206 12.3695621 10.2649638 0.6188964 10.6495222 9.7468493 2.8259688 5.2627113 11.7662191 9.9928078 10.8304392 9.3712358 2.5257432 8.5151873 12.9790849 11.9489316 9.6976731 9.6335731 1.32280000 2.09250000 0.99053000 0.00000000 0.47873000 -0.16612000 1.03540000 0.50846000 0.10555000 0.03256300 0.03256300 1.12360000 1.20890000 -0.47427000 0.04840400 0.04840400 0.04840400 -0.13199000 0.36084000 -0.12043000 -0.15771000 -0.07227400 0.42351000 -0.03395000 0.08334200 -0.13510000 0.52625000 0.49009000 0.21906000 -0.15326000 0.37232000 -0.43908000 0.00000000 -0.16707000 -0.19987000 -0.48323000 -0.47586000 0.50846000 0.10555000 -0.19212000 0.06895200 -0.08797700 0.03256300 -0.13070000 -0.13070000 -0.13791000 -0.13044000 -0.47427000 -0.16154000 -0.10127000 0.04840400 0.17935000 0.17935000 -0.13199000 0.04613300 0.05965100 0.61752000 -0.13303000 -0.09604400 -0.03558500 -0.17360000 -0.03395000 -0.47754000 -0.13510000 0.52625000 -0.00097017 0.28441000 -0.16879000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 0.000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 0.000 8.9642603 14.2630494 5.5014997 8.6103771 1.5970305 11.1669545 2.5257432 6.8996264 9.1830046 8.9840840 8.6018488 8.4830414 4.7686025 11.0432839 9.3837268 3.8283066 6.6188553 9.4229860 7.0451197 10.6188551 9.0937981 7.4326363 12.2677744 1.4262111 8.9123268 9.9237767 2.0783024 -1.3811975 11.0106357 0.6188964 13.0471498 12.6576027 7.7558463 10.0669714 11.1414366 10.1844332 6.0700673 1.6188494 0.2037650 2.4262111 8.0864606 10.2349445 7.3433687 6.1657492 8.6522782 7.2518507 9.8374184 5.1266508 9.7043275 2.5257432 12.2212060 5.5014997 3.9764095 9.5447582 5.5628926 8.6244797 9.4799419 8.3870394 10.5900393 5.7377949 13.3801985 0.2037650 11.0411827 2.8667893 9.3218934 3.0782853 7.9720022 8.4721648 12.1245426 8.3569475 7.3670478 12.0944619 10.0482618 11.6857852 6.9631516 8.8295265 9.4205635 10.7981422 13.9396909 10.8043500 9.4799419 8.9464077 0.6188964 7.7429763 10.7758862 10.970899 6.079107 9.274386 8.940783 8.989401 9.557023 7.783762 5.596136 9.878010 11.017332 -1.381198 6.773673 9.396603 12.655716 10.121687 7.716887 9.470604 8.483041 9.182051 10.868330 9.527248 10.205226 9.758406 11.034069 11.020001 10.542925 9.397754 -1.381198 9.636582 9.659145 9.559169 6.150237 10.155102 8.116707 7.911177 13.892906 10.401444 10.159952 13.007949 11.297235 9.287740 3.976409 TCGA-BH-A0B4 65 0 NA 1191 breast stage iiia t2 n2 m0 male 2007 NA yes infiltrating ductal carcinoma 6 white NA 3 1 1 NA 2 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 2.080784e-07 9.8714326 9.5913247 11.1304320 8.8314108 9.4116309 8.1905951 8.7713330 9.2570620 10.4798859 13.0693720 10.8022023 10.3724230 0.9426834 13.8144445 3.2645965 10.3385587 5.8334391 8.8191844 9.1075746 12.0700171 -0.6422791 13.4515352 5.5475300 9.5388572 11.1794791 6.9797567 NA 12.5084044 9.8704455 NA 7.8006489 6.2403487 NA 5.1390642 8.9180379 9.8545588 9.1291946 9.7755576 9.3925040 10.8958940 2.5276209 10.2877031 14.7660348 7.8982979 9.7850179 10.7408693 10.7397886 4.1125917 5.1650597 9.0141299 10.6402144 NA 10.5382359 8.5425804 5.0015591 4.8495590 9.1746888 11.2672232 10.2055455 11.5937193 12.3545316 9.0719506 10.4876321 10.2802895 10.8500591 10.2411120 3.6796377 12.3218654 10.8600396 0.3577209 10.2832595 8.7196489 2.1671331 5.5671590 10.6020690 9.5226119 11.0047137 10.3786850 1.9426834 8.3577051 11.9797569 11.2698459 9.4753482 9.4116309 0.00277430 0.00429390 -0.51138000 0.02817100 0.53288000 -0.00556600 -0.50776000 -0.01480700 -0.59937000 -0.00196850 -0.00196850 2.50260000 0.04256100 -0.01043500 -0.01191500 -0.02096300 -0.02096300 0.01402200 0.99900000 -0.51109000 1.09100000 0.02451900 0.00024865 0.98908000 2.11470000 0.00844560 0.03366100 -0.00901910 1.20020000 -0.42552000 0.00277430 0.00983820 -0.55619000 -0.60856000 -0.56359000 -0.02181200 -0.02181200 -0.54867000 -0.59937000 -0.51838000 0.52920000 0.77076000 -0.57765000 0.00830630 -0.53705000 0.02185500 0.55492000 -0.01043500 0.03718800 -0.53736000 -0.02096300 -0.02096300 0.00858480 0.01402200 0.99900000 0.23361000 -0.57903000 -0.00432150 0.02451900 -0.53197000 -0.53258000 0.98908000 -0.55569000 0.00844560 -0.01934600 -0.50662000 -0.04359600 -0.50393000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.357 -0.489 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 1.772 1.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.357 -0.489 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 1.772 1.772 0.000 0.000 0.000 0.000 8.8949235 14.1740888 6.4345215 10.1690798 4.4869910 10.3399857 1.3577209 -0.6422791 7.8694575 8.2031953 -0.6422791 8.3548845 NA 10.6637668 9.0788043 3.7500276 7.7327447 8.7414093 9.4972565 11.5407201 8.3031487 7.5768735 11.7808210 3.0581433 7.5622760 9.7031104 7.4398541 NA 11.1250619 3.4451705 13.5861480 11.8270925 8.7435675 9.4895620 9.3605201 9.8078854 5.6975542 -0.6422791 NA -0.6422791 8.6751176 9.8871356 10.2464483 4.4869910 6.3835090 7.7414097 10.0168090 5.6614845 10.7424888 NA 10.1100857 1.3577209 4.3577068 8.7673929 5.6001181 3.8812633 9.8263290 8.5226121 5.4451672 NA 13.7042188 1.6796490 10.5182068 NA 7.8890865 5.7670959 7.4921312 9.5276301 13.9120715 5.6796321 8.0371851 13.8144445 9.7585845 9.3647324 12.0700171 11.6347018 9.1521210 10.3612230 12.5219835 11.0248166 9.0141299 8.2675981 -0.6422791 7.7839699 11.3046114 11.332478 6.455737 8.695327 9.135782 9.327811 10.479912 7.058144 7.792334 10.802202 7.429167 4.445170 7.037186 6.332579 10.768156 10.525123 6.950162 8.863517 10.935134 4.750022 10.055307 9.129195 10.831918 10.388372 10.560441 10.156987 10.796497 9.042454 NA 9.390095 5.507452 10.538236 6.670588 10.873898 9.174689 6.476646 13.878753 10.357705 10.016809 12.661058 10.720197 9.677377 3.357707 TCGA-BH-A0B5 40 0 NA 2136 breast stage iiia t2 n2a m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino 5 2 3 3 2 4 1 4 4 4 4 3 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.560588e-06 3.467973e-07 10.541090128 10.218516013 12.176823493 9.992483936 7.758074606 9.709471237 10.348583435 9.802939903 9.888690440 12.367284319 11.348583490 10.807511742 6.829627609 12.955521959 2.939565111 9.858424773 6.393278899 8.438367297 9.448045253 13.024254446 3.663925224 13.814609721 8.008456635 9.238315404 10.993664456 6.190786693 1.000937447 8.465847978 9.712915908 1.415974946 8.889705333 7.041708427 NA 4.197362184 10.361809255 10.641207045 9.872353989 11.898177321 10.016377225 11.783414377 7.937599808 10.443214494 14.601455826 8.088036093 10.710907488 11.522399001 11.309301151 5.427227349 7.130245180 8.899815491 12.280282502 NA 11.080891259 5.915845925 6.177551094 6.067051384 10.486791388 12.271646796 10.832269379 12.195103361 13.185475923 8.469925445 11.150709251 10.906271381 11.506773691 11.655001355 5.381785182 11.614751569 10.233383003 0.001009533 10.256384208 9.088424936 4.503889326 6.052624562 11.009157279 10.531043265 9.855311095 9.561931715 3.545276500 10.263448558 13.077165325 12.914537224 10.582162686 9.813674268 -0.2909700 0.6788200 0.6386500 0.2576200 -0.0049844 -0.3037500 0.3687100 -0.2929600 -0.6277900 -0.0074720 -0.0074720 0.0073609 0.0223040 0.0258120 -0.2949700 -0.2949700 -0.2949700 0.2998500 0.2975600 0.0000000 -0.2865500 -0.2776200 -0.2342300 -0.2342300 -0.2342300 0.0434400 0.0434400 0.0406320 0.0391950 -0.2663700 -0.2909700 0.0091705 0.0050289 -0.3002800 -0.3037500 0.2965300 0.2965300 -0.2929600 -0.6277900 -0.6277900 0.0148880 0.0022193 0.0171240 -0.2911800 -0.2911800 -0.2911800 -0.2709300 0.0258120 0.0258120 -0.2934300 -0.2949700 -0.2949700 -0.2949700 0.2998500 0.2975600 0.2975600 0.0000000 -0.2865500 -0.2776200 -0.7159800 -0.5720000 -0.2342300 0.0105540 0.0434400 0.0617940 0.0391950 0.0207630 -0.6660500 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 9.1940767 13.8578091 7.9744203 10.5255039 4.0598571 11.1635633 1.7379463 NA 8.7197803 7.5708181 -1.5838088 8.6304765 3.7379247 10.0004925 9.7932102 4.6448196 9.0075221 9.9677078 9.4631236 9.0009622 9.5238248 8.0652556 10.0530773 2.5034505 8.9178369 9.8532316 3.5452765 NA 10.4783831 2.0009735 12.4292351 11.8131394 7.1608335 9.8018621 8.7288827 9.0697403 7.3904140 0.7379463 1.4159749 10.6900865 8.4369797 8.7580743 10.2010434 5.1439199 6.9811014 5.7014021 9.6627403 6.1370998 9.3311321 -1.5838088 11.5923286 4.6254517 4.0307069 9.5819743 5.7867741 5.1024986 10.2461186 8.6119868 6.0670514 0.7379463 13.5585455 -1.5838088 10.0435334 NA 8.6424117 4.6058262 7.5113969 8.1233589 12.0030457 6.3817835 7.6181234 12.9555220 10.3993495 10.5878019 13.0242544 11.7159231 9.1996363 11.4099994 13.3682859 10.6819076 8.8998155 9.5225625 0.7379463 7.0919568 11.9585479 11.376726 8.644818 8.506112 9.728315 9.368013 10.599951 7.174223 8.572083 11.348583 5.673387 1.000937 6.210416 8.102220 10.997200 10.292517 7.471282 8.403263 12.520025 5.492815 11.995160 9.872354 10.596841 9.495484 10.907101 10.051718 10.678682 9.236179 NA 9.327549 5.555552 11.080891 7.298643 10.637324 10.486791 7.487462 13.390190 9.975377 10.145195 12.664965 11.191198 9.775200 1.415975 TCGA-BH-A0B6 47 0 NA 2483 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 1 4 2 1 5 2 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 1 0 0 0 0 4 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1.654223e-05 7.109345e-06 8.6406282 9.0354067 11.6042496 8.7093744 8.0022401 9.7297805 10.1803431 9.8194665 10.0742260 14.1224838 10.8305314 10.5748476 NA 11.8530300 -0.3309732 9.1356708 5.0441230 7.9146375 8.5486678 12.4111834 NA 14.0563278 5.6463643 9.4402521 10.0172594 7.1729105 NA 14.0710670 8.6775132 -0.3309732 10.3884734 6.9728649 NA 5.4764400 9.6363109 9.7025076 9.0646186 10.2183879 9.7697469 10.3348645 8.7011304 10.1463369 14.4576755 6.1654196 10.9358711 10.5524916 10.2549859 3.7983720 8.2727110 8.7025076 10.6701409 NA 10.8181965 7.3020796 8.0111590 4.6914504 10.3699577 11.6434991 10.1828122 10.8377567 12.2122372 8.9486952 10.7957890 10.1511413 11.0638152 10.3953027 3.9170116 11.2067883 12.0085170 -0.3309732 10.4699844 8.7631622 1.6708856 6.3764432 10.4168580 9.3102331 9.4155990 9.5990827 3.3695223 9.0222313 12.7617591 12.2751427 9.6035127 9.4764394 -0.3656700 0.2623200 0.2623200 0.1312500 0.1006000 0.3301100 -0.0681270 0.1074500 0.1074500 -0.0508060 -0.0508060 0.3109700 0.1064000 0.1064000 -0.1291400 0.0927500 0.0927500 0.0703860 0.0022193 -0.1526000 -0.1136500 -0.3592000 0.1112500 -0.4915500 -0.1668800 0.1428000 0.1428000 0.1393400 1.3330000 -0.0790770 -0.3656700 0.0622230 -0.3948100 0.0617940 -0.1952500 -0.0681270 -0.0681270 0.1074500 0.1074500 0.1074500 -0.0496950 -0.0496950 -0.3945300 -0.0084385 -0.0084385 -0.0084385 -0.0923450 0.1064000 0.1468200 -0.1291400 0.1371700 -0.3880600 0.0862330 0.0703860 0.0022193 0.0022193 -0.1526000 -0.0568460 -0.3592000 -0.1301800 -0.3400200 -0.3623800 0.1163800 -0.3406700 0.1428000 0.1565100 0.0234280 -0.3364100 0.106 0.106 -0.129 0.000 0.000 0.000 -0.153 0.000 -0.359 -0.138 -0.138 -0.340 -0.340 -0.387 -0.282 0.143 0.143 -0.366 -0.103 0.157 0.157 0.000 -0.336 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 -0.113 0.231 0.000 0.000 0.000 0.000 0.106 0.106 -0.129 0.000 0.000 0.000 -0.153 0.000 -0.359 -0.138 -0.138 -0.340 -0.340 -0.387 -0.282 0.143 0.143 -0.366 -0.103 0.157 0.157 0.000 -0.336 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 -0.113 0.231 0.000 0.000 0.000 0.000 10.7492358 12.6397297 5.6232816 10.1544108 6.4239714 11.9316199 5.5998206 -1.3309732 8.7565473 8.8264315 0.6691175 6.9074892 0.6691175 10.7425567 9.3138422 1.8389921 9.6442161 8.9533304 9.4231369 10.2455689 10.1877327 6.5208339 10.7802202 3.1926518 7.7749932 10.3272961 3.9544848 NA 11.0435807 2.7565537 12.7373590 13.0348602 8.3625716 10.3923188 9.7202935 9.7899705 2.3695223 2.3695223 NA 2.4764335 9.4900612 10.9966372 11.5163377 5.0953506 9.4335498 8.5286194 9.7611810 5.8687559 9.2284616 NA 11.6773381 4.6463643 3.1285244 9.7842517 5.3231467 7.9521728 10.4210469 8.9475341 11.6402688 -0.3309732 13.9382478 1.4764335 11.1379631 NA 7.0784753 5.6232816 7.7538926 9.1788595 11.5262628 4.8979035 8.5654171 11.8530300 9.7815241 10.5321093 12.4111834 9.3841886 8.6520781 10.3446006 12.6885884 9.0635472 8.7025076 9.4529014 -0.3309732 7.3590827 11.0517086 10.9828179 6.8539595 8.5894373 8.4021001 6.4105514 10.3659565 9.3738528 8.1808371 10.8305314 7.6718998 0.9910274 5.5517283 7.3541136 9.6115990 10.7999768 7.8514792 9.0408612 10.4401613 8.4828656 9.6110418 9.0646186 11.4908585 10.1468428 10.6290865 10.2851739 10.3931721 8.1946052 9.8314759 9.4354975 9.2540472 10.8181965 6.3970054 10.8629179 10.3699577 7.2874704 13.6404485 10.4210469 10.4748284 12.3835447 10.4113940 8.2004661 3.5270703 TCGA-BH-A0B7 42 0 NA 2559 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 2 NA 2 6 2 6 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 10.3500751 9.9543958 11.8561496 9.5924197 8.1773822 9.9632039 10.2169105 10.3743621 10.4617793 14.2254687 10.2998298 10.5215794 3.2704841 17.6804251 3.6448830 10.4444925 5.1594597 8.8010063 6.9079218 12.3705698 NA 11.8462409 6.3100201 9.0983859 10.0357315 8.4013002 1.8375396 9.9014664 10.9740106 1.3229665 8.9994197 8.7152763 NA 5.8010060 10.0649074 10.7256665 9.6792536 10.4515057 10.2536964 11.5376250 12.4300826 8.3689137 14.9153993 7.4164707 10.2637969 11.2166938 11.2918314 6.3100201 5.4928851 9.1942043 12.9876602 -1.4843885 11.1189985 6.0854586 8.7103608 5.1303131 9.8665431 11.6364899 10.5664730 11.5768064 12.6239651 7.7682697 11.3828828 9.9875687 11.1628376 11.0491771 4.6241301 11.6366518 9.0273567 -0.4843885 10.3917372 8.7753472 2.8382459 6.4928835 9.1809400 9.7256665 9.8153844 12.6464963 3.0391735 9.3221537 13.2960413 12.4071030 10.3599175 9.7575872 0.0331360 0.0772090 0.4657000 -0.0224690 -0.0224690 3.6569000 0.4985700 0.0129870 0.0129870 -0.2765000 -0.2765000 1.4115000 0.0000000 -0.0959120 0.0416000 0.0416000 0.0416000 -0.1757500 -0.0480720 -0.1855900 -0.1663700 0.0041632 -0.0674580 3.6569000 0.0034687 -0.0598070 -0.0598070 -0.0598070 -0.0015243 0.0339720 -0.3214700 0.1999900 -0.0224690 -0.0193140 0.0831720 -0.1465700 -0.1382000 0.0129870 0.0129870 0.0425900 -0.0410240 -0.0878440 -0.2765000 -0.3769000 -0.3769000 -0.1919900 -0.2093800 -0.0959120 -0.1323600 0.0416000 0.0416000 0.0416000 0.0416000 -0.1757500 -0.1097100 -0.1097100 -0.2419500 -0.1663700 0.0041632 -0.1182200 -0.0674580 -0.2962700 0.0188030 -0.0598070 -0.0598070 -0.3775200 0.3318900 -0.2268300 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 0.000 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 0.000 9.8769996 13.2794388 6.2637969 10.0204230 6.3229593 10.5572632 5.1738150 1.3229665 8.2953235 8.0134561 0.8375396 8.5733385 4.4224954 10.7262754 8.9872794 2.6030744 10.0996270 9.5120775 10.5289267 10.3967180 9.3234660 7.5924197 11.8015841 3.1005740 8.4654309 9.7128207 4.8906412 NA 10.8562887 4.4698013 12.9658487 12.6338963 8.6136363 9.9652686 9.0204230 9.3951873 5.6653501 2.1005740 -0.4843885 6.6754758 8.3642270 9.9554349 9.4359569 5.8731562 10.7768645 7.4344673 9.7587780 6.7682690 9.5668131 -1.4843885 10.2924483 4.4463423 3.7635284 9.5670101 7.0127374 6.6551557 9.9355642 8.9249951 8.7718126 3.6448830 13.8150625 1.6855365 10.4907355 NA 9.9052354 6.1229336 8.5448914 8.1630624 12.6475414 6.7201758 12.0687533 17.6804251 9.9455338 11.3069704 12.3705698 9.2212364 9.1800514 10.6798825 13.6995107 10.9457952 9.1942043 10.1057233 0.5156115 7.2804757 11.5870664 11.010460 7.085460 8.869854 9.487866 7.584382 9.876473 8.013456 7.958547 10.299830 6.521228 3.270484 8.393655 7.504118 12.914815 10.941082 7.753531 9.473432 10.992856 7.688031 10.601475 9.679254 9.968360 9.853783 11.529624 10.562728 10.037695 9.982190 2.322966 10.146458 8.308395 11.118999 7.392121 10.944603 9.866543 7.277155 13.168393 10.629346 11.163737 12.030195 10.651313 9.104319 4.373586 TCGA-BH-A0B8 64 0 NA 1569 breast stage i t1b n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA 3 1 NA 1 NA NA 1 4 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 10.3942776 10.5723287 11.6786067 9.8572400 8.4825801 7.7474653 9.9269490 8.9619086 10.8078377 13.3588998 8.7459230 10.6836500 -0.1229625 13.1740883 3.3365262 9.2423293 5.3848960 7.8543803 9.8464869 13.2380846 7.3689534 14.3335511 5.4006609 10.4174754 10.8056188 7.2779801 NA 10.6800206 12.6624507 4.9645650 11.4218234 6.8137389 3.1990284 4.4620654 9.7210214 10.1291744 10.8280207 10.6755721 9.3528338 11.3629297 0.4620523 11.2052143 15.0860777 7.2316138 9.6353236 12.8099610 11.6090558 4.2694147 7.3568806 9.4172285 11.0470254 NA 11.4606533 7.4006626 4.8078392 4.5495275 9.7194508 12.2401400 9.8714539 11.4848930 12.7724863 8.0594948 10.8392734 10.8990936 11.5537187 11.2707590 5.8078366 11.3781911 12.4966326 NA 10.0816716 9.3241837 2.6104638 4.2694147 11.2012809 9.9221775 10.4297695 9.8493622 9.5548200 8.3528340 11.7379933 11.1800248 10.1774529 9.1717212 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.9022400 12.0698555 4.4620654 9.4667515 1.1874511 10.5583388 -1.1228055 -1.1228055 8.0293850 8.2390443 0.4620523 7.0013767 5.0268487 10.0871629 9.2401399 3.7839909 8.1273986 7.8078379 7.9751326 10.2330020 8.3922483 7.7779674 10.8767481 1.7469576 9.4249588 10.0394917 4.0865545 NA 10.7543845 1.1990598 13.4726493 11.6662264 8.2124905 9.4991523 8.7536172 9.5477565 7.6715163 1.4620523 NA 3.0470323 9.5512926 10.2252753 10.3508062 4.5495275 7.3729556 8.4220648 10.4986945 5.7597444 10.1059191 NA 11.2825078 3.2694222 4.1990284 8.8733620 5.8703228 2.8770964 9.3619232 7.9986339 6.2949534 6.2169495 14.3956921 1.1990598 10.3913213 -0.1229625 8.1808813 4.8994705 8.2012810 9.3947699 13.695029 5.368953 7.780982 13.174088 9.529049 10.799685 13.238085 11.070010 9.677191 11.203530 12.159175 12.321209 9.417228 7.953916 2.336540 7.577540 11.016332 10.6527106 9.4714251 8.4201320 9.4760833 9.1578711 9.7831492 5.5209565 8.3324278 8.7459230 7.7779674 1.1990598 4.5209565 6.4997375 10.2313497 9.0755455 6.9908426 7.8771007 12.5974515 3.9645650 11.5446932 10.8280207 11.4622977 10.2635018 11.4340853 9.3190071 10.5317364 9.3148524 0.4620523 8.2656990 3.9645650 11.4606533 6.6319875 10.0619757 9.7194508 7.2564786 14.0248618 9.8210804 9.4936491 12.6202518 9.8904230 8.7612710 2.5775376 TCGA-BH-A0B9 44 0 NA 1572 breast stage ia t1c n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 8.669932e-07 2.427581e-07 8.9657843 8.5672347 10.7090676 9.0078074 9.3468284 8.9291424 8.6731158 11.0268214 10.5595496 11.8226732 11.9086192 10.7921193 -1.1590736 10.6054737 2.3004459 10.1635083 7.8211566 8.6927658 11.5465412 6.3645794 -0.5741111 8.7282372 7.8744398 10.7584970 11.3593011 2.0109588 -2.1590736 10.8917157 10.5663830 2.0109588 9.1996679 6.6386777 3.7717588 3.3956112 9.2865490 11.2100688 8.8197273 9.5340680 9.7452750 10.2092504 1.1629190 8.8282809 11.4650125 7.9905862 9.4880209 10.2704235 9.9719091 2.3645724 NA 9.1980189 9.9271529 1.5414653 11.1102896 6.3408631 7.3408622 6.3994377 7.8771903 12.8031446 11.2299758 10.9584975 12.8979931 7.7776544 10.9836025 11.2611414 11.3196600 10.6376648 4.1078050 11.4701457 10.0716377 NA 10.2680677 9.9148236 3.5692116 5.4703742 12.1144481 11.0871635 10.8288137 8.9780080 -0.5741111 5.5824837 12.3674549 11.9559791 10.3070932 9.8602600 0.01768400 0.65774000 0.00730700 -0.56624000 -0.01450300 -0.00180140 -0.03667400 -0.54078000 -0.00263220 0.02904400 0.02904400 0.07570300 0.02412700 0.49649000 0.00847430 0.53573000 -0.00097017 1.61650000 -0.06933200 1.72130000 -0.56823000 0.04897200 -0.50619000 -0.50619000 -0.00622860 0.90936000 0.08435400 0.46468000 0.03453600 -0.27176000 0.01768400 0.03637000 -0.55236000 0.02468900 -0.02876500 -0.58078000 -0.61080000 -0.54078000 0.00000000 -0.02151000 0.03750000 0.00305220 0.02904400 0.57451000 0.57077000 -0.56331000 -0.53561000 0.02904400 0.05394800 0.02820000 0.07771800 -0.00097017 -0.10395000 1.57660000 0.00597000 0.02006300 -0.57841000 -0.56435000 -0.46067000 0.07455200 -0.50619000 -0.50877000 -0.06517900 -0.50494000 -0.38940000 -0.55547000 -0.52287000 -0.54804000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 0.000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 0.000 9.0178131 11.9519078 7.0109420 9.0146939 5.4920679 11.7746152 4.3328726 0.6483734 9.3293591 9.2541157 7.8536414 8.2789874 5.7717536 10.7257596 10.4224527 3.9907643 6.9728741 9.6378676 7.9218344 9.8042742 10.0642885 7.7113813 10.4685506 2.6483734 9.3723982 9.5345037 6.7358349 -2.1590736 9.5727601 4.3328726 15.0350329 12.3024322 7.9996263 9.4790001 9.5401554 9.7580158 4.8410170 2.4259695 -2.1590736 4.6091994 8.5143259 10.2813669 5.1808679 5.3956044 8.2228949 7.1241048 10.0342340 2.8854182 10.7073298 4.4409323 11.7335596 2.5414653 4.0109409 10.3132100 6.7475472 5.4334736 8.1298826 7.1470787 6.9311287 3.0889387 14.9362695 1.0109230 10.8157898 NA 9.8129195 2.5959094 8.3557308 7.8082428 11.761950 9.228496 8.765087 10.605474 11.026357 11.309895 6.364579 11.058369 9.581131 12.049022 13.278866 12.861736 9.198019 8.294288 6.176407 8.599240 10.068031 9.948888 5.224719 9.204604 9.909459 8.504575 10.051874 7.983124 5.410874 11.908619 12.110655 -2.159074 9.188638 9.797001 12.911599 9.665578 7.921834 9.139079 9.421746 6.978008 9.695663 8.819727 10.203782 10.235479 11.512889 10.031150 9.997416 9.273037 -1.159074 9.701844 6.860608 11.110290 4.949540 9.951826 7.877190 8.233796 15.883168 11.552469 11.026667 11.974159 11.426331 8.586691 4.162943 TCGA-BH-A0BA 51 0 NA 1132 breast stage iiic t3 n3a m0 female 2006 NA yes mixed histology (please specify) 27 white NA 5 2 3 3 2 4 3 3 3 4 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 10.5339617 10.3096225 11.6025077 9.7526332 7.9904189 8.7532064 10.2737259 9.5138121 9.7142984 13.8750381 9.6294453 10.7589245 0.4551233 12.9278346 6.0097323 8.7600656 5.5844274 8.4607684 9.6621580 13.0850126 -0.5447714 13.5191286 6.8517490 9.0241069 10.9369432 7.4381373 1.2624933 7.7629593 9.7054421 3.7770725 7.6839624 7.2753228 0.4551233 5.8038728 10.5571194 10.8918553 9.5232503 12.2538180 10.3721428 11.8282807 2.8474558 10.0039656 14.3211186 8.0521534 9.4565520 11.2131587 10.7609205 4.9145741 4.4093434 9.0504013 11.9881083 NA 10.8711495 5.6645966 6.1346235 3.6250717 10.5029493 11.6721927 10.1142477 11.6099618 12.6613187 6.6498999 10.3972916 10.4574137 11.3642868 11.1758155 5.4551431 11.6761266 10.9078998 1.0401209 9.7798868 9.1898535 4.4172314 5.6839631 10.2990648 9.7503387 9.8285527 10.4558480 3.0401034 10.2753227 12.7367840 12.5488089 9.8033186 9.2511834 0.469980 1.022000 1.021800 0.041175 0.044715 -0.321000 0.418980 0.379730 -0.335140 0.361660 0.361660 0.361660 -0.361930 -0.337910 -0.343200 -0.232640 -0.344230 0.389820 0.389150 -0.328500 0.405270 -0.343660 -0.358060 -0.358060 -0.363940 0.324790 0.341120 0.341120 0.377430 -0.341710 -0.335030 -0.310140 0.080745 -0.397970 -0.323620 0.418980 0.418980 0.379730 -0.335140 0.409440 0.564360 0.307290 0.361660 0.400110 0.400110 0.400110 0.630800 -0.338370 -0.189860 -0.186600 -0.345270 -0.344230 -0.344230 0.374830 0.389150 0.909760 -0.328950 0.405270 -0.343660 -0.147210 -0.365560 -0.358060 -0.328320 0.460070 0.341120 0.391470 0.044715 -0.150550 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 0.000 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 0.000 9.0116497 11.7283565 5.4324250 9.9913909 2.7346121 11.3096225 2.3620209 1.0401209 8.4691644 8.2299306 NA 8.7936238 3.2100303 9.3969250 9.7364943 1.9145645 9.6959350 9.9629384 11.1226989 10.3710231 10.0909071 8.6718895 11.0881389 2.7770725 10.4614698 9.6143845 3.2624933 0.7770304 10.1646583 2.7770725 12.1746395 12.0102121 8.3177812 10.5482311 7.4238109 9.3939882 4.5212329 0.7770304 -0.5447714 1.9145645 8.6779388 9.2633035 11.1531972 6.8814089 8.6100758 6.5426063 9.6449683 6.5319600 8.8928958 -1.5449819 11.3142902 4.0990006 3.9145741 9.7230832 5.1963395 7.3316604 9.3612828 8.7148870 9.2083605 -0.5447714 13.4804996 2.4551496 10.1398923 NA 6.8772080 5.8560221 8.4537340 7.9308769 11.245289 4.563671 8.491317 12.927835 10.107554 10.778480 13.085013 11.644351 8.749765 11.437246 13.278610 9.967884 9.050401 8.393253 1.262493 7.322422 11.831676 11.206269 6.721930 8.692354 9.404241 8.832354 11.450651 6.726606 7.429558 9.629445 5.262497 5.553176 6.055057 7.532280 10.574409 10.871677 7.962938 8.199978 11.642496 7.700696 10.954280 9.523250 10.980909 9.142519 11.579911 9.963929 11.253818 8.877208 NA 9.817981 8.088139 10.871150 5.362035 10.487369 10.502949 7.674312 13.077708 9.809944 10.711352 12.015357 10.819278 10.309623 5.432425 TCGA-BH-A0BC 60 0 NA 974 breast stage iiic t2 n3 m0 female 2007 NA yes infiltrating ductal carcinoma 12 white NA 5 2 1 3 2 2 3 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 3.467973e-07 9.8051446 9.8633565 11.8080631 8.6731811 7.7761277 9.1380350 10.2817804 9.6822230 10.5481352 13.4335911 11.0462651 10.6146542 3.3597601 11.4305958 2.5202211 10.3370445 6.3860435 8.1503525 9.7716492 13.0810648 4.1302802 13.3883207 6.6473404 9.6285336 9.9640452 6.7480345 NA 11.5901297 10.3551161 0.8572644 8.1564720 8.0650919 NA 5.6985658 9.1511191 10.7142084 9.5047227 10.9803078 9.4239525 10.8345441 NA 11.3301242 15.4549288 7.8571139 10.5118972 10.8860912 9.9826776 3.5202336 4.9865475 9.0162946 11.9414082 0.5942619 11.3338416 6.3166961 6.5154759 6.2723013 10.6551958 11.7183511 9.9509018 12.5216374 12.6408081 8.1349391 10.8497305 10.4205812 11.5513318 11.0644819 4.1549477 12.3241903 10.6914719 -1.7278573 10.1534156 8.8961831 2.5985558 6.5343963 10.8343055 9.2140830 9.4701327 9.8577338 2.3597742 8.8759281 12.4557045 11.6765119 9.5823464 9.8153335 -0.00138580 0.50533000 0.48837000 0.00291330 0.58739000 0.01321300 0.00069327 -0.00207840 -0.00207840 -0.02903600 -0.02903600 0.00833510 0.00360760 0.00360760 -0.00304750 2.14310000 2.96050000 0.00416320 -0.00221680 -0.59711000 0.58184000 0.00055459 -0.59039000 -0.59039000 0.73151000 -0.00027724 -0.00027724 -0.00027724 0.00000000 -0.00138580 -0.00138580 -0.00356530 -0.60960000 0.00097064 -0.61403000 0.00672040 0.04259000 -0.00207840 -0.00207840 0.00903120 0.01419000 -0.00470790 -0.04141600 0.00138680 0.00138680 0.00138680 0.00138680 0.00360760 0.00360760 -0.59750000 -0.00304750 -0.59556000 -0.59556000 0.00416320 -0.00221680 -0.00221680 -0.59711000 0.00097064 0.00055459 -0.61738000 -0.59039000 -0.59039000 0.00416320 -0.00027724 -0.00027724 -0.00998870 0.01084200 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9052967 13.4065675 6.5669217 9.8502025 3.7857912 11.2838784 1.8572644 NA 8.6581640 8.2118810 -0.7276184 8.1745263 1.9727294 10.6691740 9.4365802 -1.7278573 8.9152559 9.5519122 8.9552962 9.4902594 9.8664537 7.1701474 12.0632610 3.6646194 8.0053169 10.1701471 4.5760807 -1.7278573 11.0227993 2.5202211 12.4352437 12.5341028 8.5285104 10.0976581 9.8814805 9.6043382 3.5577042 1.0796341 -0.7276184 1.8572644 8.6088081 10.0271892 11.8397825 5.1791925 7.0981195 7.0988501 9.6353414 5.9727409 9.4092927 NA 11.9670948 4.2030367 4.2030367 9.6829544 6.5371671 5.5577042 10.1000414 8.8220864 6.9269376 -1.7278573 13.9739601 -0.1427356 10.4012627 NA 7.2863221 6.0137682 7.9796607 8.4321731 14.596546 5.529690 7.989978 11.430596 9.493889 10.822327 13.081065 11.784178 10.840020 10.563185 12.920435 9.899836 9.016295 9.387345 2.664619 7.388646 10.958364 11.040072 7.715245 8.943843 8.582915 7.520229 10.372175 7.711094 8.933189 11.046265 7.881480 3.972739 5.401586 7.600169 10.695155 9.998520 7.154945 8.639717 12.123856 6.370333 10.377356 9.504723 10.979229 9.738888 10.227952 10.471054 10.832396 8.630953 NA 8.811974 6.898010 11.333842 6.386044 10.709146 10.655196 7.322150 14.096390 10.608250 10.092880 12.199987 10.400618 8.618815 3.130288 TCGA-BH-A0BD 47 0 NA 554 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 2 white NA 5 2 1 NA NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 9.2075906 9.9260856 12.2692903 9.5224795 8.2669950 8.9031115 9.2484985 10.3778701 10.7580990 13.6915846 10.8044729 10.9553677 0.7093789 12.2143573 4.5371594 9.4602140 6.7449630 7.9947421 9.0545232 12.0243760 0.7093789 13.8633983 5.8712276 9.9011392 10.8339780 6.1818281 0.7093789 11.7578988 11.7402826 4.1422991 7.9891822 7.7383510 NA 4.5573366 9.6814579 10.9641321 10.1233906 12.3973277 9.1187306 11.5801667 6.1555954 10.0624866 15.1917569 8.9078337 9.2011928 11.6354874 11.5277621 5.2822285 6.2203009 9.0913150 11.6963194 -1.6126375 11.2988036 5.2075923 6.6635353 7.1085109 10.7289304 11.8690849 10.4447265 12.5179017 12.7462688 9.8961968 10.6213308 10.3372128 11.6123177 11.3861783 5.6190168 12.6007437 11.0949864 0.3873625 10.6252191 9.7267049 2.9765836 5.7624498 11.1435509 10.0856821 10.2531449 10.0882847 7.7093396 8.4668963 12.8960730 12.0320565 10.3233133 9.4722199 1.40020000 2.27530000 2.28290000 0.00458000 0.00458000 0.00583090 0.00041593 0.00708260 -0.68661000 0.62388000 0.62388000 0.62388000 0.00019811 0.00019811 -0.00512270 3.65690000 3.65690000 0.00011452 -0.00421990 -0.00069303 0.00000000 0.00402430 -0.01642900 -0.01642900 -0.01642900 -0.03245000 -0.03245000 -0.03245000 -0.01585000 -0.00373950 -0.68021000 -0.00083160 0.00458000 0.00583090 0.00583090 0.00041593 0.00041593 0.00708260 0.00527490 -0.69812000 -0.00124730 -0.00375990 0.62388000 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00019811 0.00847430 -0.00512270 -0.69006000 -0.69568000 -0.69568000 0.00708260 -0.00421990 -0.00421990 -0.00069303 0.00000000 0.01474900 0.00541390 -0.01642900 -0.01642900 -0.68085000 -0.03245000 -0.03245000 -0.00304750 0.00652620 -0.00401620 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 0.000 8.62820310 13.27872065 8.52696278 10.09088267 4.11069732 10.59534104 0.38736254 -0.02767496 8.65185428 7.70933958 NA 8.05102292 1.84683427 10.70482417 9.10079819 3.81367860 8.89223072 9.50829751 11.65916642 9.92511541 9.88092179 7.64950625 11.38264877 2.55493260 9.27919524 10.15600949 3.67281001 NA 11.07719125 3.14229906 11.78535356 12.52911963 7.64950625 9.94965399 10.04160002 9.28676843 4.45349783 2.19478049 0.38736254 6.59686509 8.37609630 9.03486993 9.19234929 5.66353533 8.23881695 6.42083438 10.34451363 5.90311060 9.70708368 -0.61263746 10.92511533 3.29429725 4.00211740 9.60003573 8.01467163 5.25777628 9.54286240 8.53588810 7.16219896 1.97236181 13.40682858 -0.61263746 10.91317710 -0.02767496 6.88725718 5.19476473 7.91879289 9.06865012 15.117518 7.158901 8.265463 12.214357 10.044730 11.563741 12.024376 12.014033 11.828691 10.834753 13.593816 10.599908 9.091315 9.315930 2.557337 6.875252 11.284690 11.37414247 7.77758081 8.58339873 8.68547417 9.39724015 10.03783066 7.23916028 4.97237559 10.80447293 7.54222941 -0.02767496 8.33139172 8.79115865 12.42898520 10.03261966 8.69915980 9.05806778 12.44447257 6.52183753 9.93363563 10.12339060 10.14396795 9.04294222 10.71972789 10.38459113 10.99958897 8.62462148 2.08783620 9.30669219 6.58708441 11.29880361 7.22976190 10.47154232 10.72893041 7.34741320 13.16615610 10.05939489 9.77327407 13.19677780 10.46355911 9.53015679 2.63533649 TCGA-BH-A0BF 56 1 1324 782 breast stage iib t2 n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 7 2 4 4 1 5 2 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-07 10.4084835 9.5881894 11.5980839 9.3216848 8.8271966 9.5449457 9.1106835 10.1086715 10.5809506 12.3363756 10.6848822 10.5787719 3.4818285 11.7385669 2.3242922 9.1581514 6.6953104 8.7582749 10.5787719 11.8178358 0.1092937 12.9341063 4.8526681 9.4622646 9.9786488 6.2237623 -1.3763204 11.3322815 9.7466766 2.8717845 8.2962738 7.3380937 NA 6.7987738 9.1217003 10.2586597 9.1405335 10.8753310 10.6852197 11.0667921 3.6238435 9.9463400 15.1150127 7.5594559 9.5874672 11.1479005 10.8502608 4.2088138 1.2088294 9.3329323 10.3978119 -0.3761331 11.0353596 6.4630518 8.0501131 6.1395493 10.8655339 11.7103166 10.0837924 11.8279611 12.9969856 8.0709318 11.1069086 10.3165251 11.2012774 10.8815310 5.2088099 11.9842842 11.4281813 0.6238669 10.5667295 9.1236944 3.9103585 6.7427891 11.1286676 10.6620817 10.7152840 9.7634000 3.7531338 7.4150116 13.4923818 12.4285846 10.0883943 9.5329917 -0.154480 0.628790 0.628790 0.105850 0.076429 -0.135490 0.111550 0.107620 0.540830 0.064368 0.064368 0.480790 0.071104 0.071104 0.098851 0.514030 0.104820 0.000000 0.000000 0.074696 -0.285600 0.273480 -0.335950 -0.324490 0.472970 0.035806 0.035806 0.034113 0.480960 -0.154480 -0.154480 0.031014 -0.311320 -0.135490 -0.145280 0.114330 -0.284180 -0.339870 -0.309410 -0.333010 -0.022332 -0.022332 0.064368 -0.333870 -0.695230 -0.305160 -0.166630 0.071104 0.111990 -0.352670 0.096234 0.104820 0.104820 0.000000 0.000000 0.000000 0.074696 -0.285600 -0.029857 -1.292900 -0.335950 -0.324490 -0.020412 -0.399750 0.034113 0.480960 0.027107 -0.325070 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 0.493 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 0.493 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 0.000 10.1630074 13.8965877 9.0321783 9.4158254 3.6682440 10.5318659 3.5307450 -0.3761331 8.5216939 9.0118660 -1.3763204 8.1722850 7.2748999 10.4348218 9.4957537 4.7323723 9.8460397 9.8941438 9.8074839 10.2649972 9.1927263 7.5925153 11.0040390 3.7531338 7.5692921 10.0495890 3.6682440 NA 11.3785273 1.9457950 12.9780979 12.1819105 8.4101180 9.8835918 10.9344614 9.7245110 6.6899379 3.7937711 0.9457575 9.8794673 8.7349842 9.3059653 9.3961631 4.6462145 7.8892758 7.2784848 10.3732990 6.8953111 9.9418264 -1.3763204 9.8278082 4.1474125 3.7937711 9.6748739 6.8574685 8.9034592 9.9525234 9.7271363 10.7023330 0.2087669 13.6335897 3.0832815 10.2681555 NA 9.6047022 5.1157033 7.8062428 7.8037579 11.762698 6.238558 8.178437 11.738567 10.475598 10.631577 11.817836 10.550145 9.173633 10.919904 13.515015 11.429592 9.332932 10.355592 -1.376320 7.994536 11.280944 10.943803 6.524716 8.666876 9.011866 7.665508 10.204861 8.758275 6.732374 10.684882 5.208810 2.945776 5.689936 7.439264 12.681671 10.690610 7.934461 8.285626 12.231757 9.197496 11.827158 9.140534 10.406028 10.113696 10.310787 9.667559 10.717596 9.040646 8.797526 9.848013 9.488035 11.035360 8.921911 10.967312 10.865534 7.193704 13.391671 10.054301 10.690274 12.474524 10.590354 9.578772 5.721881 TCGA-BH-A0BG 73 0 NA 1871 breast stage i t1 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 3.121176e-07 11.76991973 9.57445275 11.30683195 9.34550394 9.39280962 9.44708261 8.95214075 11.25341633 11.67798697 13.14091147 11.30701092 10.89423830 -1.66978582 12.06130179 2.13743795 9.67382969 6.98830067 8.75320471 12.93475788 4.45937260 NA 8.84282928 9.84628128 9.73161365 11.22376957 7.22187225 0.91502366 13.73758897 9.80986907 1.33009942 8.18339818 7.53221253 0.91502366 3.18806854 9.18027569 10.48617193 9.68213222 9.19582199 9.71271287 10.40590219 0.33009942 6.76471770 15.23897396 6.74502753 10.15703449 11.61520201 11.11288235 4.05801338 -0.67001535 9.21273177 10.28210198 -0.08497634 10.92534629 6.96671308 7.31022831 6.85365139 10.50189111 11.91810070 10.17753776 11.58791859 12.79852196 8.18495714 10.87094338 10.32267314 11.56983653 11.37772401 4.89994415 11.96739297 9.06902542 1.33009942 11.06860337 9.68983832 2.79279290 5.53954348 9.10898725 10.25675546 10.63814336 10.03399240 5.53954348 4.57801485 12.49601647 13.51817537 9.77975333 9.82394436 -0.032996 0.522750 0.521530 -0.428440 -0.034631 0.546470 -0.143470 0.355120 0.314020 -0.444690 -0.444690 2.346300 0.720180 -0.043553 0.404110 0.262160 0.262160 0.649650 0.364110 -0.017391 -0.435720 0.340960 0.070299 0.070299 1.221900 -0.367930 0.326400 0.326400 -0.068797 -0.032996 -0.032996 0.328660 -0.428440 0.567560 0.000000 -0.449330 -0.449330 0.355120 0.314020 -0.478920 -0.439730 -0.467060 -0.444690 0.311610 -1.259700 0.255340 -0.448890 -0.043553 -0.042110 0.404110 0.262160 -0.450400 -0.450400 0.649650 -0.046583 -0.046583 -0.017391 -0.317000 0.361330 0.500470 0.186310 0.070299 -0.450610 -0.367930 0.326400 -0.472050 -0.042924 0.152840 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 0.590 1.035 0.312 0.312 0.000 0.000 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 0.590 1.035 0.312 0.312 0.000 0.000 9.21120279 12.92651157 6.54440811 9.34131600 5.00576376 11.26783048 4.43861223 2.85365638 8.75530489 9.60679494 3.75635083 9.14530400 7.29298507 10.92114359 8.95671040 NA 8.32585589 10.88659488 6.65201747 9.02183225 9.60574192 7.48996032 11.36815044 1.65200456 9.28283013 10.73096824 3.33008507 NA 10.27150330 4.93000398 13.21206310 12.49829084 8.01483730 11.01110759 10.55830629 9.04347548 3.75635083 2.50001167 0.65205047 8.56370842 8.00604607 9.88707375 7.39617833 4.08497417 9.28733608 7.19117571 10.65511315 7.38808016 11.60096812 2.57802089 11.19175738 2.33009942 5.27260179 10.17204628 4.87945092 5.75635350 9.62528382 7.60853797 6.93000161 -0.08497634 13.95377032 2.57802089 11.12247245 NA 8.80683507 8.59921550 8.28573881 8.14226638 13.035666 6.948475 8.803795 12.061302 10.310228 10.830184 4.459373 11.458083 9.168213 11.194855 13.484986 12.450084 9.212732 7.608538 3.330085 7.898045 10.456471 10.2317100 5.8378827 8.9658071 9.2286903 8.3894334 9.9115954 7.6920324 5.4593726 11.3070109 4.3744831 3.9448022 4.1114487 8.5977650 13.6210076 11.2634106 8.4254857 8.9234799 8.7647170 7.2784560 10.6888664 9.6821322 10.2689333 9.9364941 11.5640080 10.3604111 10.0974457 8.7895206 NA 8.7422987 7.6743851 10.9253463 5.9225452 10.0694475 10.5018911 7.4397104 14.6834769 10.6169354 10.7045850 13.5987405 10.4674002 8.9475563 0.9150237 TCGA-BH-A0BJ 41 0 NA 660 breast stage iib t2 n1a m0 female 2008 NA NA infiltrating ductal carcinoma 2 white NA 5 2 3 3 3 2 3 3 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 10.0269476 10.3444053 11.8832689 9.6337311 8.2348854 8.8945929 10.2557730 10.0852660 10.2288619 14.2073321 10.5304687 10.8340900 0.1055440 12.9996624 2.6905735 10.6499231 6.3150553 7.8267016 9.5014937 12.6312050 0.1055440 13.7500222 5.1788501 9.6372309 10.4755634 5.8604911 -1.4795526 9.9764809 10.9384926 4.0442017 7.2954273 7.5595591 0.1055440 5.4395035 10.1721403 10.1293570 10.0631884 11.8614638 7.7780278 10.9508312 -0.4793515 10.8986640 14.9751000 7.9205589 10.0885961 11.5211683 11.3994574 4.1353461 4.4513760 9.1725888 12.6036207 -1.4795526 11.0375712 8.3708269 6.7733054 5.1788501 9.8181296 11.6927550 10.6601914 12.2976899 12.5616147 8.8891465 10.9782774 10.7870929 11.1694470 11.0781038 5.1930660 11.5732081 10.1841982 NA 10.4233920 8.9140305 3.6544470 5.4154578 10.8132493 9.6861752 9.8425681 9.6652983 1.3279747 8.3986911 12.4591170 11.7379920 9.9188494 9.4813662 -0.1087400 0.8404100 0.8404100 -0.1671400 -0.1671400 -0.2813200 0.3236600 -0.0182160 -0.2940200 0.0144700 0.0144700 0.0144700 -0.1179600 -0.2856600 0.3028200 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.0095426 0.0234260 0.0234260 -0.0221950 0.2370500 0.2370500 0.2370500 0.0013868 -0.0349040 -0.1087400 0.0084743 -0.1671400 -0.3073000 -0.2950900 0.3236600 0.3236600 -0.0182160 -0.2940200 -0.2940200 0.3206000 -0.3226300 0.0144700 0.0020805 0.0020805 0.0020805 0.0020805 -0.2856600 -0.2856600 0.3028200 0.3028200 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.0095426 0.0109820 0.0234260 0.0234260 0.0202030 0.2370500 0.2370500 0.0013868 0.0000000 -0.3389400 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 0.000 0.840 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 0.000 0.840 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.000 8.7470523 13.5819691 5.9800710 10.1667487 2.3964335 10.6027891 -0.4793515 0.1055440 8.7385976 8.0343676 NA 8.3279949 1.3279747 10.1935074 9.0723484 0.5206485 8.7446418 9.4484180 9.7738966 10.5806604 9.6774438 7.8244210 11.1244982 2.7685655 9.3653459 9.8632704 4.7685655 -1.4795526 10.4465654 2.3280035 13.3966773 12.3081346 8.4215069 9.9933309 7.3408186 9.4587495 3.9469086 -0.4793515 NA 0.1055440 8.5786320 10.1689977 10.7473533 5.6186733 6.6912159 6.5595591 9.9188494 6.2210805 9.5650343 NA 12.1161307 4.5206423 3.5206360 10.1888248 6.2496482 5.3408186 9.7614314 8.6486344 7.7349595 -0.4793515 13.7865847 2.2210728 11.0957066 NA 8.9279077 5.6499229 8.2193447 8.8891465 13.249409 5.554064 7.893505 12.999662 9.582410 11.722764 12.631205 12.476925 9.512162 10.880115 13.528894 9.722151 9.172589 9.472653 0.105544 6.921520 11.736931 11.186864 8.024466 8.988246 8.647344 8.492184 10.363701 6.930031 9.285512 10.530469 6.710465 5.824422 4.670387 7.587510 11.298717 10.224544 7.715397 8.904344 13.805464 6.497920 10.420522 10.063188 10.219779 9.862715 11.265264 10.114031 10.933739 9.928439 NA 9.592471 6.996374 11.037571 7.185976 10.324368 9.818130 7.116942 13.833554 10.522400 10.824135 12.925981 10.501494 9.311803 1.327975 TCGA-BH-A0BL 35 0 NA 2278 breast stage i t1c n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA NA NA 2 5 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 2.427581e-07 10.3713892 9.8920408 11.5697954 9.4524898 7.9076478 9.2354078 9.6089299 11.0769637 10.4047667 13.4093689 10.6097720 10.7607083 4.5673386 11.7809126 3.1888282 10.3497092 6.8479931 9.3753564 8.4304153 6.1523031 1.7413591 10.6509908 9.5534018 9.0818192 10.5914151 4.5298647 -0.7180941 12.0111346 11.0158015 3.6742572 8.1461247 8.9789063 5.1399197 4.7413699 10.9499373 10.2314007 9.6629409 10.4674337 10.0637083 11.7955430 5.1888282 7.0468108 15.3885323 8.2954847 8.4099331 11.3329777 11.1792170 5.7657548 1.0892947 9.9957549 12.1577840 -1.7178568 10.4846748 5.7413699 7.3904631 6.4008794 9.7388065 11.8646688 10.0596050 12.0545626 12.9066200 7.3126062 11.0530155 10.6645168 11.3574179 11.0698413 4.3694037 11.8500136 9.2599341 -1.7178568 10.8254540 9.2769993 4.3158053 5.7165657 11.3560802 10.4559281 9.8998653 10.0250901 1.9823639 8.2791184 12.9570688 13.0642715 10.5916992 10.2394035 -0.109330 1.185900 1.097700 0.374950 0.314980 -0.181160 0.276310 0.832740 0.194510 -0.168660 -0.168660 0.478500 0.965760 0.365100 -0.135360 -0.135360 -0.135360 0.916220 -0.205730 -0.083333 0.229010 -0.181690 -0.055671 -0.055671 -0.055671 -0.049521 0.127190 0.223450 0.399780 -0.050911 -0.109330 -0.180050 -0.233120 -0.251040 0.306010 -0.233200 -0.170060 0.832740 0.194510 0.194360 -0.133030 0.808700 -0.256660 -0.144000 -0.144000 -0.144000 -0.161410 -0.192870 0.371170 -0.135360 -0.135360 -0.142690 -0.180680 0.314340 -0.205730 -0.205730 -0.216510 -0.165350 0.320940 0.413960 -0.055671 -0.055671 0.261690 -0.165160 0.127190 0.718100 -0.395640 -0.164350 0.345 0.345 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.127 0.436 0.436 0.718 0.718 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.150 0.276 -0.161 -0.161 0.000 0.000 0.345 0.345 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.127 0.436 0.436 0.718 0.718 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.150 0.276 -0.161 -0.161 0.000 0.000 9.4067063 14.5286422 3.1888282 10.2606492 4.4913914 12.0515700 4.7082038 8.1978182 8.9631770 10.1426378 9.1653457 9.2960988 6.6613178 10.5618394 8.8612547 3.6394869 9.6323255 10.3802999 8.3126057 8.8317234 8.7422616 7.7857644 12.0855654 3.5673386 8.5071461 9.9927452 4.5487264 NA 10.7385498 2.6742572 12.5056388 12.1550944 9.4568645 9.4865099 9.6580642 9.2692027 5.1399197 1.8669080 0.2819059 0.2819059 7.6634820 8.6828180 7.3208574 6.4468451 9.0763221 6.5719574 9.8123450 6.2126763 9.7336650 6.7536139 11.3950297 4.2361329 4.9823776 9.9380195 5.8231914 6.3746952 9.5580631 8.6634816 7.6504451 3.3693967 13.0062394 0.2819059 11.0622735 -0.7180941 8.8855652 4.9112937 8.5452078 7.9472746 11.227931 8.556899 8.395681 11.780913 10.134078 10.766006 6.152303 10.395355 8.890193 11.875190 13.928751 10.590562 9.995755 8.458112 1.603881 7.353401 10.946386 11.4463743 5.6306676 8.7321189 9.2324946 8.7238456 10.4388024 7.7717866 7.4468459 10.6097720 9.6139752 0.8668684 9.2193125 9.2648681 13.1418617 10.6523537 7.8650218 8.5369671 10.4671239 7.8631393 10.8244144 9.6629409 10.1266445 9.3473549 12.2048947 11.0259316 10.4637122 9.1021177 2.1888440 9.3158298 8.2987472 10.4846748 8.4099331 10.3338919 9.7388065 7.4889528 13.2586818 10.0534282 10.3115710 12.7458462 11.3053465 9.5089529 3.7737959 TCGA-BH-A0BM 54 0 NA 1876 breast stage iib t2 n1a m0 female 2007 NA no infiltrating ductal carcinoma 3 white NA 8 2 2 3 2 4 3 3 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 3.121176e-07 10.6317447 9.2636206 11.0609024 8.5266549 8.2829262 8.8127597 10.1970759 10.0548679 10.6552972 13.1611118 11.2829261 10.5359688 -0.6508612 12.7027958 3.6711688 9.9703715 7.0771554 9.0686243 11.0604722 13.1096435 -0.6508612 13.9596836 6.7754997 9.5216629 10.4024826 9.3881544 NA 8.8688716 8.0565944 3.3492379 8.6346376 7.6392546 NA 3.9930946 9.0737493 11.3926045 8.7415529 11.2733056 9.2196001 10.9667029 7.2740482 10.1240225 14.6182890 7.3517688 10.0974283 10.6369478 11.0176773 5.2318778 4.2561275 8.9285512 12.2666075 1.3492520 11.4502262 5.3492343 5.1305932 4.2561275 10.1541731 12.0459857 10.3329416 12.3028863 12.5921118 8.0002874 11.0570259 10.8644720 11.0852145 10.8752455 4.1565908 12.0315717 11.0928076 NA 10.3428815 8.6507315 3.9942448 3.8086631 10.0101227 9.9152895 9.7796880 9.7166502 3.8727992 9.5562497 13.2492531 13.3316052 9.3520505 9.6334812 -0.00401620 0.62028000 0.64176000 0.00124810 0.00124810 0.00694350 0.00000000 -0.00124730 -0.64818000 0.00402430 0.00402430 -0.00512270 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00249380 -0.00346270 -0.00346270 0.00736090 0.00489100 0.00013863 -0.64800000 -0.00664320 -0.00664320 -0.00249380 -0.00249380 -0.00249380 -0.00083160 -0.00401620 -0.00263220 -0.00595220 0.00124810 0.00694350 0.00694350 0.00000000 0.00000000 -0.00124730 -0.64818000 -0.64818000 0.00285070 0.00624810 0.00402430 0.00360760 0.00360760 0.00360760 0.00360760 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00249380 -0.00249380 -0.00346270 -0.00346270 -0.00346270 -0.00066590 0.00489100 0.00013863 -0.69676000 -0.64800000 -0.00664320 -0.03776200 -0.00249380 -0.00249380 -0.00083160 0.00103520 0.00402430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3034319 11.9717449 5.4366982 10.1646187 3.7415533 11.0885941 3.0496830 0.3492520 8.6935312 9.8430908 -0.6508612 8.2964923 5.5971617 10.1460862 9.2455679 2.3492237 8.2651148 9.4206978 11.1630166 11.4801277 9.5221128 7.3150200 11.4380237 1.0182781 9.2990621 10.0435933 3.6711688 NA 10.4557984 3.9341957 14.0790155 12.1519537 7.9114777 10.0119038 7.3034319 9.3019767 4.3034301 1.6711575 NA 0.3492520 8.5166534 10.7012789 11.2440532 7.1371377 7.3207789 7.8490810 10.0444638 5.9785915 9.7045865 -0.6508612 12.6233223 2.1565908 4.5971617 9.9612561 6.4078762 5.0216618 8.7199230 7.8450904 8.0805543 NA 14.8204661 1.9342145 10.3569636 NA 8.5166534 6.9190910 8.0322298 8.0565944 12.429798 3.808663 8.884511 12.702796 10.423377 11.069052 13.109644 11.563858 8.909568 10.040979 13.235504 10.584651 8.928551 8.991287 NA 7.426051 11.072043 10.702382 5.279973 9.009231 9.124023 6.857030 10.238998 6.130595 6.841089 11.282926 7.483662 5.207217 6.926665 5.738803 11.137138 10.282926 8.320779 9.188439 10.592409 6.035736 11.136252 8.741553 10.915765 10.036611 10.715558 9.717742 10.404518 8.366044 NA 8.705093 6.724275 11.450226 6.231878 10.301249 10.154173 6.949149 14.938857 10.405196 11.596570 12.525253 10.151752 9.512885 2.808673 TCGA-BH-A0BO 54 0 NA 2197 breast stage i t1b n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 2 NA 2 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 11.25125859 9.68349856 11.51819746 9.58624120 7.83948600 9.10677753 10.40037462 10.26903092 11.37430372 13.02686988 9.79322044 10.38573484 3.58746101 12.63877933 2.90157169 11.15011511 6.15936681 8.95920736 10.01236405 11.61790361 0.96295614 11.52759512 6.95165423 9.43155255 10.17971518 7.35528678 -1.62193235 11.76696310 9.59475268 2.77032164 9.30133431 9.25529088 -0.03696985 5.48653097 9.76925040 10.76090096 10.75738518 11.78620382 9.27206659 11.64523236 2.37801214 9.66860173 15.30193773 9.22490754 10.03576740 11.46314725 11.16815160 5.10592527 1.18535913 9.25221978 11.81133138 NA 11.16509310 7.72008142 6.60682565 4.37800520 10.31795318 11.57184008 9.99639228 13.40794099 12.93331487 7.74869402 10.73363312 10.64015445 11.17059372 11.71311793 4.99271859 11.49986402 12.20395931 -1.62193235 10.76844447 9.57951809 3.87017728 6.34379154 10.43328915 10.02050984 11.13456307 9.81367699 2.69992914 8.42921590 14.20025393 13.91404145 9.36455996 8.74869402 0.00624810 0.00624810 0.27695000 -0.00041585 -0.00041585 -0.00290910 -0.00027724 0.00444110 -0.06369900 0.00000000 0.00000000 0.00000000 0.00249690 0.00208050 -0.00035548 -0.00035548 -0.00035548 0.00013863 0.00013863 -0.00069303 0.00208050 -0.00063764 0.00027728 0.00027728 0.00027728 0.00263570 0.00263570 0.00263570 0.00430210 0.00624810 0.00624810 0.00694350 -0.00041585 -0.00290910 -0.00290910 -0.00027724 -0.00027724 0.00444110 -0.06369900 -0.27698000 -0.00041585 -0.00041585 0.00000000 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00499690 -0.00035548 -0.00035548 -0.00035548 0.00013863 0.00013863 0.00013863 -0.00069303 0.00208050 0.00332990 -0.19450000 0.00027728 0.00027728 0.00360760 0.00263570 0.00263570 0.00430210 0.00430210 0.00541390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9834862 13.1598275 8.3116975 10.5638114 2.1530595 10.8860491 2.0784391 2.2848990 8.4760390 8.3751863 NA 9.2351869 4.7355601 9.9727979 9.6840685 3.0218706 10.5938431 9.5479317 11.1478446 9.8552591 9.5436801 7.8976428 12.1907857 4.9629700 9.0845028 10.8788486 7.6749231 NA 9.9402491 4.0218617 12.7465132 11.9375034 8.4278555 9.9639083 7.8374381 9.1560838 5.0218617 1.9629561 1.3780121 4.1593628 8.6128243 9.4554902 9.5207520 7.1461909 8.0308878 5.6817866 9.9000979 6.3836317 9.3920271 0.6999069 12.3794150 5.2728257 5.2108953 9.4505615 5.7670562 5.0504320 9.6971144 8.7863366 7.7021872 1.9629561 13.5237399 -1.6219324 10.4447687 NA 9.2140570 5.7355601 7.6424496 8.9713978 12.416685 4.132898 7.940249 12.638779 9.807644 10.415211 11.617904 12.327925 8.756302 10.680074 14.462857 13.153720 9.252220 8.507290 -1.621932 7.514998 11.488653 12.084071 7.604419 9.959207 8.499540 7.720081 9.581814 6.394814 7.468119 9.793220 5.947862 3.837439 5.050432 5.153846 11.984990 10.489142 8.340903 8.569066 13.022708 7.257590 12.403813 10.757385 10.303932 9.142049 11.066476 10.535038 10.375892 9.513075 NA 9.390743 7.630672 11.165093 6.640102 12.385473 10.317953 7.637750 13.850158 10.006452 10.367756 13.691209 10.013271 9.570916 2.547943 TCGA-BH-A0BP 76 1 2296 1481 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 4 NA 2 2 3 4 4 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.329254e-06 9.363527e-07 9.947582005 9.602387098 11.364632999 9.759222093 8.637329846 9.066380661 10.029474144 9.399868769 11.256704345 13.429091386 9.170497708 10.502186474 2.911231380 11.616511995 4.396652728 10.503183834 6.317217226 8.189209800 9.550264267 12.491797817 -0.995678394 12.550505595 5.970119699 9.047320803 11.057921143 10.148992809 1.326249701 7.896118027 10.430599323 4.396652728 7.834057618 7.492174461 -0.995678394 4.676758229 9.681173217 9.290892266 9.007149519 11.354445053 10.713849237 11.356653944 NA 11.448314107 15.122221151 8.967924233 10.560840650 10.570388643 10.207682541 5.174258594 4.811691939 9.435832125 11.844325663 0.004321606 11.086816335 5.704775155 4.619043192 5.194157987 9.762557776 11.443386290 9.793868253 12.640052700 12.769931500 7.856083723 10.600990278 10.558870672 11.165781453 11.148992809 4.289738577 12.096596210 10.503183834 1.326249701 10.890793295 9.071768836 2.053980168 5.112858570 10.033621771 10.274045660 10.629586850 10.264666142 4.589296093 9.442086745 12.427450507 12.012062714 9.285105326 9.938762582 0.0294200 0.1197600 0.5987200 0.0675180 0.0718220 -0.3261200 1.1057000 0.4337800 0.0346770 0.0294660 0.0294660 0.7543300 0.2526100 0.0968160 2.1085000 0.0000000 -0.0850590 -0.1253800 2.4469000 -0.3131900 -0.3299500 2.9895000 -0.3371000 -0.7888100 0.2906700 -0.0974950 0.0794470 0.7698300 0.5232800 -0.3861600 0.0294200 0.0529520 0.0675180 1.5482000 -0.3739200 -0.3364100 -0.3293600 0.5128100 -0.7392300 -0.7788000 0.4880200 0.2669800 -0.3552100 0.0696690 -0.3246100 -0.3498500 0.0274960 0.0685860 -0.3317900 -0.3437700 0.0000000 -0.7210100 -0.7338900 -0.7510600 -0.1050000 -0.1568800 -0.3347500 -0.3299500 -0.3461800 -0.3454100 -0.7703100 -0.7888100 -0.3264600 -0.8442700 -0.5270600 -0.1894900 0.4567400 0.0043021 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 0.000 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 0.000 8.658970483 12.848844218 6.488150240 10.877009451 3.130321384 10.344184594 1.326249701 1.589284107 8.451418021 9.388038818 NA 9.238325676 3.648189303 10.191686632 8.946848975 0.004321606 9.568484017 8.906709646 10.623178897 10.143246336 11.365340739 7.865421504 12.545915246 2.463753225 8.091797668 9.978749207 6.405214660 3.091801369 11.752107972 3.396652728 12.144365468 11.983938430 7.932112564 9.959984550 8.174259593 9.154081640 9.141325748 2.004321606 -0.995678394 6.745802035 8.805234406 9.492174661 9.782411678 6.422187579 8.434787082 7.043253721 9.946115865 7.169241563 9.640052745 1.589284107 10.923942840 1.589284107 4.704772389 9.933119364 5.661974718 3.759219763 10.028781712 9.236755446 6.252262368 1.326249701 13.885305117 NA 10.764222813 NA 8.443126309 5.798750431 8.040508369 8.606105353 12.106098553 5.213786634 8.240348679 11.616511995 9.515098787 10.761724578 12.491797817 14.885305117 8.754204064 10.364633054 12.742954673 10.804830091 9.435832125 7.593048944 0.004321606 6.929147132 11.332448480 11.3953096 6.9052017 9.0183552 8.8245136 6.8869781 10.6551216 6.1232751 8.3793740 9.1704977 6.9758778 NA 6.9986886 6.4004252 11.3447411 10.9869717 7.9556191 8.6061054 11.2119590 4.8869793 11.2869076 9.0071495 10.0391336 9.5760873 10.3374899 10.5930492 10.7621412 8.5021866 2.4637532 8.9517379 5.0043351 11.0868163 7.5589235 10.9433995 9.7625578 7.2668990 13.8128966 10.0183550 9.8762399 12.2466155 9.8885051 9.7073729 0.5892841 TCGA-BH-A0BQ 39 0 NA 2255 breast stage i t1c n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 2 5 3 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.080784e-07 9.980578 9.251366 11.583422 8.920018 8.614673 9.416127 9.967189 9.611233 11.028744 12.526022 11.006008 10.277095 4.681787 13.481098 3.600864 10.868014 7.651971 8.090252 11.063133 12.581995 1.485375 13.919366 5.900427 9.433387 10.217840 8.871971 -1.099433 9.597395 9.548785 2.359858 9.120806 7.704558 NA 4.600864 9.551479 10.264562 9.381217 11.279264 9.324593 10.451655 9.543381 10.906052 15.388424 8.002297 10.157225 10.467908 10.905350 4.987889 4.515138 8.734898 11.570862 NA 11.306100 6.825240 5.854624 4.707784 9.971889 11.774256 10.742777 12.704255 12.539542 8.853168 11.089016 10.502198 10.887691 10.638519 4.572853 12.003387 10.860429 -1.099433 10.458848 8.896194 3.432118 5.544284 10.740025 9.971889 9.836329 8.994505 3.544288 10.502198 13.674854 12.857166 10.046996 9.855350 -0.00027724 0.78929000 0.78929000 -0.00206200 0.00221930 0.00583090 0.03881200 -0.00553750 -0.41091000 -0.00097017 -0.00097017 -0.00097017 -0.00069303 -0.00356920 -0.00041585 -0.00041585 -0.00041585 -0.00346270 -0.00346270 0.00416320 0.00166420 -0.00401620 0.01056400 -0.00678130 -0.00678130 -0.00719580 -0.00719580 -0.00719580 -0.00456950 -0.01880300 -0.00027724 0.00035653 -0.00206200 0.00221930 0.00583090 0.03881200 0.03881200 -0.00553750 -0.41091000 -0.43550000 0.00180300 0.00180300 0.00221930 0.00166420 0.00166420 0.00166420 -0.01207800 -0.00356920 0.00458000 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00346270 -0.00346270 -0.00346270 0.00416320 0.00166420 -0.00401620 -0.41597000 -0.42669000 -0.00678130 0.06952500 -0.00719580 -0.00719580 -0.00456950 0.00458000 -0.03108600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2579792 14.3130631 7.9116544 9.9414017 3.7529305 11.2019233 3.0703550 2.0703550 8.8560769 9.1765514 0.4854268 8.3761606 1.4853753 10.2557782 9.1625220 1.9004128 8.8207799 9.0527118 10.0988721 10.4215367 9.7315522 6.4550165 11.0014178 2.6008644 10.1950478 10.2178397 7.4200630 NA 10.6743904 2.4854011 13.7185598 12.5815556 8.4042526 10.1334474 9.1074415 9.4347300 3.4239949 1.4853753 -1.0994326 9.6735663 8.9018353 10.1530926 9.4249687 5.4853882 7.7302446 7.7891704 9.7158103 5.8891109 9.7646132 NA 10.8028022 3.3598585 2.9878847 9.9056095 6.3959625 5.5297835 9.2873672 8.1292459 7.8834204 -0.0995872 14.4155417 0.9004128 10.1846728 NA 9.7761764 5.5869268 7.4357028 9.0939523 12.760738 5.423988 8.759962 13.481098 10.332969 11.182067 12.581995 11.996977 9.393282 10.555510 13.506254 11.489142 8.734898 9.426926 1.485375 6.586927 10.846968 11.318016 7.008952 9.277638 9.145980 8.070352 9.787107 7.014169 7.710999 11.006008 7.631746 -1.099433 8.985235 6.226676 12.349834 10.466957 8.462345 8.643578 11.896724 5.641893 9.353842 9.381217 10.376160 10.056510 10.080336 10.138832 10.509606 9.012867 -1.099433 9.479319 6.922795 11.306100 8.050174 10.396782 9.971889 7.222355 14.465946 10.103775 10.494285 13.222707 11.027777 9.057774 2.359858 TCGA-BH-A0BR 59 0 NA 2330 breast stage i t1c n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 4 NA 2 2 1 2 4 4 1 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 1.213791e-06 3.121176e-07 10.061600 9.855818 11.621824 9.995203 8.287465 9.718515 10.768355 10.339047 10.490907 14.596754 10.595053 10.741843 -0.220278 12.525344 3.867135 10.801344 4.027596 7.843065 9.112825 12.410165 NA 12.720718 4.802038 9.849872 9.699278 8.322702 -0.220278 8.786697 11.680348 3.101600 7.818589 8.585414 NA 5.271523 10.163374 10.575304 9.396219 10.030561 10.438774 11.237564 -1.220278 10.802038 15.265484 7.591623 9.527024 11.137497 10.753726 4.205932 5.768354 10.051133 12.285854 1.587029 11.331859 6.295370 6.326564 6.364632 9.735320 11.212212 10.319314 12.437770 12.664127 8.606219 10.890153 10.303952 10.950534 11.207507 4.612559 12.469341 9.075439 1.101583 10.681668 8.341912 2.588061 5.625159 10.654267 9.897313 9.759810 8.733866 2.587029 10.593451 12.931876 11.957712 9.952097 9.469668 0.0107030 0.0107730 0.0102850 -0.5301200 1.0851000 -0.5089500 3.6569000 0.0056919 0.0062481 -0.4923500 -0.4923500 -0.4923500 0.0063871 0.0237060 0.0081959 1.8817000 1.0757000 0.0324220 0.0324220 -0.5085700 0.0228650 0.4299100 -0.4017400 -0.4017400 -0.4017400 -0.0067813 3.6569000 0.0016642 0.0084743 0.0000000 0.0107030 -0.0095426 -0.5301200 -0.5325600 -0.5273600 0.0087528 0.0087528 -0.0182160 -0.5141400 -0.0228810 0.0231450 0.0231450 -0.5241600 -0.5147600 -0.5147600 0.0147490 -0.0156040 0.0237060 0.0237060 -0.5246100 -0.0384420 -0.5214300 -0.5214300 0.0324220 -0.5021400 -0.0045695 -0.5085700 -0.5276700 0.0195030 0.0036076 -0.5312400 -0.4017400 0.4864700 -0.5209200 -0.5112500 -0.5275500 -0.5400700 -0.5535300 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 -0.232 8.9458330 14.5099544 5.8881953 10.3222183 3.0943712 11.9033065 0.7796379 0.3646845 8.5092909 8.9115271 NA 8.6528833 1.9496096 10.6741089 9.0335174 1.3646285 8.8868872 8.7497759 8.6515752 9.8484483 9.5126429 7.7512133 11.3798153 2.6865678 7.4556272 9.7454543 4.3032328 NA 10.2997976 2.1015828 12.3386886 13.4912295 8.4818426 9.6407570 8.5773314 8.9483421 4.7569485 2.5870289 -1.2202780 5.5345566 8.5312142 9.6638406 12.0173282 4.5870229 9.5840269 6.6985338 9.6235911 7.1195201 9.2874647 0.3646845 10.6661287 3.8671354 3.2391078 9.7249091 7.3103492 2.8671255 9.9256022 8.7583805 7.4835740 2.5870289 13.6313703 0.7796379 11.1786809 NA 7.2226133 5.4520946 7.8855786 8.6172981 11.595273 10.412211 8.253376 12.525344 9.822697 10.638428 12.410165 10.250329 10.404465 10.941432 12.892842 9.177345 10.051133 8.892110 -1.220278 7.180550 10.878689 11.730226 5.845758 9.100470 8.495632 8.261470 10.714179 6.606219 7.971963 10.595053 8.967022 3.867135 5.364632 7.773882 12.088151 10.293398 6.949596 8.495632 10.683928 4.989125 10.578506 9.396219 9.932589 9.998233 11.091135 11.096234 10.785996 9.021653 8.018075 9.291699 4.239100 11.331859 8.671454 10.586932 9.735320 7.692560 13.680018 10.396219 9.670694 13.054412 10.605424 9.018075 2.480110 TCGA-BH-A0BS 55 0 NA 1641 breast stage iiia t3 n1c m0 female 2007 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 5 3 2 3 3 5 1 4 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.733986e-07 10.1908152 10.2259420 11.9300961 9.9818111 8.1832041 9.5211091 10.2697216 9.3041087 9.5686197 14.1541971 10.6101412 10.3129460 0.9576175 13.4259220 3.9575989 9.6300203 7.5500518 7.7323818 7.9079079 12.9389244 1.1799568 14.4022648 8.0056279 9.5833038 10.3722802 6.0019891 -1.6272707 7.7011955 11.0496914 -0.6272707 7.7606494 6.4170272 -1.6272707 4.9725456 9.9424881 10.6446790 10.7304594 12.1397824 10.5842166 11.5970864 1.1799568 11.5544059 14.5409716 9.4970640 9.5875587 12.1413337 11.3432777 3.0164963 7.5649253 9.1098797 11.9107001 NA 11.0626305 2.2795307 3.7301834 3.6205630 11.1556307 11.5315576 10.1539921 11.3111094 12.8781959 7.9079079 11.1047999 10.7473677 11.5078608 10.9224172 4.9272233 12.0021029 9.5306110 -1.6272707 9.8176472 8.7124826 1.6959938 4.0730747 10.4404030 10.1803898 9.4367015 9.5166532 2.8320596 10.3459711 12.1024656 11.1684692 10.1999752 9.0326285 0.00305220 0.64156000 0.64286000 -0.00152430 -0.00794540 -0.00055444 -0.00055444 -0.00249380 -0.00733390 -0.00027724 -0.00027724 -0.00027724 0.00277450 0.00277450 0.00249690 0.00249690 0.00249690 -0.00235530 -0.00235530 0.00013863 0.00555290 0.01000600 0.01014600 0.00680440 0.00680440 -0.00037427 -0.00037427 0.00208050 0.01363200 0.00305220 0.00305220 0.01056400 -0.00152430 -0.00055444 -0.00581400 -0.00055444 -0.00055444 -0.00249380 -0.00772360 -0.00733390 0.00000000 0.00000000 -0.00027724 0.00499690 0.00499690 0.00499690 0.00499690 0.00277450 0.00277450 0.00249690 0.00249690 0.00249690 0.00249690 -0.00235530 -0.00235530 -0.00235530 0.00013863 0.00555290 0.01000600 -0.71433000 0.01014600 0.00680440 0.00485790 -0.00037427 -0.00037427 0.01363200 -0.00065496 0.02193400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.5966341 11.7257793 3.0164963 8.7279834 1.7962240 10.7745786 NA NA 8.1308557 6.9613467 NA 7.0521126 1.6945682 10.7700397 8.3570509 -1.6272707 6.5121842 9.4367015 10.8394736 9.9730101 10.4844105 7.1864134 11.2646060 2.8320596 8.6510818 9.4713226 5.2306142 NA 9.4889765 2.3726457 12.8385177 12.7817582 8.2780196 10.5796468 7.3033698 9.0441736 1.1799568 2.3726457 NA -1.6272707 8.7268820 9.4521173 11.8634834 4.2552741 6.7669237 6.6487573 10.3873504 7.1241761 9.9725453 NA 12.3042010 1.3726178 4.1005488 10.1900639 8.4507700 0.6945682 9.2165536 6.6945599 8.5599846 -0.0424568 13.4906407 -0.0424568 9.9664905 NA 7.3210000 5.9424887 7.5550270 9.0128773 13.1774189 4.9117922 8.5550270 13.4259220 10.1486541 11.0937316 12.9389244 12.4733769 9.5249174 10.9997103 13.3015672 8.6026528 9.1098797 8.8051744 -0.6272707 6.5425568 11.0173901 10.8569519 8.7345762 9.0661193 8.4279149 8.6649542 10.1466536 4.4170288 7.6394189 10.6101412 5.1141005 0.6945682 4.8961943 6.7659802 10.1670484 9.5280833 7.8051744 8.6098425 13.3797912 1.3726178 8.8612457 10.7304594 10.3059543 9.8432914 11.3692825 8.8804272 10.8762098 10.3391379 NA 9.5126058 1.8320799 11.0626305 8.3180764 10.5309265 11.1556307 6.5624577 13.5944461 10.4521173 10.8991317 13.5077806 9.5655418 9.1983864 1.1799568 TCGA-BH-A0BT 56 0 NA 1386 breast stage iia t1c n1mi m0 female 2007 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 5 2 5 3 2 4 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 9.4813916 8.3159103 11.0727896 7.4213369 9.1160546 9.7211489 9.1329053 9.1669900 9.6533791 12.6515746 10.5315906 10.5323379 3.1407623 13.9333102 2.7046728 9.1397869 7.1368415 8.2483826 9.5531072 13.5315906 -0.8567372 13.4785832 6.4998491 10.7976120 11.2316853 8.9118264 -0.3827015 9.1378242 10.2812083 1.9391513 9.1717943 6.6284324 NA 2.3176514 9.0507909 10.1368417 10.0122040 9.8910011 8.7283413 10.8962357 11.5597200 11.1027832 14.0251371 5.7636984 9.1495614 11.3198111 10.6622825 4.6172044 NA 8.3870432 10.1884841 -0.3827015 10.5772074 4.8266603 5.5479433 4.0095263 10.0019892 11.7214766 10.3476756 11.7930669 12.5800111 8.7995999 10.7602698 10.1602567 10.9037632 9.5894673 4.1090596 12.1250001 11.6191414 NA 10.2860905 8.6157959 4.3475735 4.4998459 11.7160601 10.2337544 10.1180474 9.6533791 2.0766275 9.0340030 14.5922252 13.1805210 10.7500265 9.9670396 -0.065581 0.596020 0.602860 0.279160 0.263170 -0.133420 -0.543300 1.022600 -0.536620 0.862950 0.862950 0.645610 -0.117000 -0.117000 0.299950 0.299950 0.299950 0.190260 0.190260 0.742900 1.012000 -0.512800 0.260370 0.260370 0.260370 -0.161540 -0.546530 0.229470 0.338040 -0.548340 -0.065581 -0.106700 0.279160 -0.133420 -0.133420 -0.543300 -0.543300 1.022600 -0.536620 -0.536620 0.286980 0.306650 -1.045500 0.277580 0.277580 -0.530530 -0.535120 -0.117000 -0.098814 0.215760 0.299950 0.299950 0.299950 0.190260 0.190260 0.190260 0.219830 1.012000 -0.493400 -0.533990 0.282470 0.260370 -0.132380 -0.551560 0.229470 0.338530 0.230250 -0.553370 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 0.000 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 0.000 8.5360688 12.3957960 8.9955003 9.8869167 1.8219551 11.2454232 3.3176514 0.6172044 9.1832595 8.2429145 0.2021356 7.0848116 1.7871399 10.6347099 9.0138103 1.7871399 7.0009093 9.1388060 8.3314508 12.2429143 8.9879691 7.3451258 10.2619631 NA 10.1170514 9.4844842 3.1407623 NA 10.9667632 4.7464901 13.3814033 12.2171183 7.5508960 8.7808550 10.3015159 10.3310216 7.7073177 0.2021356 -1.3827015 8.0868474 10.8101147 10.2785382 10.7263832 3.9026042 8.4181377 7.9095271 10.9198444 4.9209840 9.8375838 0.2021356 11.2358204 1.4245459 3.9391325 10.4780015 6.2232044 2.6172044 8.4611266 6.8412070 5.7152372 0.9391513 13.7939630 -1.3827015 9.9514788 NA 10.2479276 4.3451267 8.0642885 9.9786011 12.245354 5.009522 8.736147 13.933310 10.640960 11.283651 13.531591 10.646148 9.077661 10.433389 13.117363 10.046612 8.387043 8.938006 -1.382702 7.175626 10.955385 10.237425 7.187061 9.009523 9.585152 7.620020 10.398700 6.391993 5.076636 10.531591 6.925545 3.475189 5.261061 6.666836 10.709632 9.803320 9.433389 9.270946 8.301954 5.303708 11.414644 10.012204 11.778337 10.911826 9.287862 8.843618 9.876360 7.499848 NA 10.007235 4.902609 10.577207 6.140768 9.923267 10.001989 6.324564 14.061282 9.878125 11.059890 12.869132 10.751311 8.640960 2.317651 TCGA-BH-A0BV 78 0 NA 1519 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white NA 5 5 3 NA 3 5 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6.935946e-07 2.080784e-07 10.282166 10.043903 11.924509 9.262019 8.700312 8.611101 10.085768 10.239757 9.446299 14.119409 11.205706 11.071176 NA 12.578617 3.373050 8.883778 6.077596 7.921944 8.281721 13.258351 2.525042 13.951388 1.425513 10.181893 10.391714 6.640531 NA 8.730264 11.997270 2.077585 7.500806 6.837331 NA 5.061107 10.720467 10.163127 10.662899 9.663923 10.292355 11.647795 2.318606 11.252974 14.942801 8.230792 9.216215 11.874519 11.522798 3.788091 3.203123 9.898934 12.155381 -1.381949 11.011285 5.438343 6.476143 5.061107 10.429136 11.819674 10.406066 12.096301 12.891376 8.988850 10.797139 10.509274 11.004564 11.287269 5.788088 11.605960 9.109014 NA 10.749055 8.313391 2.621759 6.027554 11.184693 9.882019 10.249340 9.820287 2.203138 9.480025 12.451448 11.097438 10.525053 9.486985 -0.29260000 0.82490000 1.10560000 0.07196600 0.07196600 -0.26877000 0.02834100 -0.01896000 0.00000000 -0.66856000 3.65690000 0.07383300 -0.27523000 -0.27523000 0.08082500 3.65690000 -0.64678000 0.05565800 0.05565800 -0.66946000 0.05993700 -0.00761010 0.07110400 0.07110400 0.07110400 0.00069327 0.00069327 0.00069327 0.11638000 -0.29260000 -0.29260000 -0.25043000 0.07196600 -0.26877000 -0.26877000 0.02834100 0.02834100 -0.01896000 0.00000000 0.00000000 0.07056600 0.07599100 -0.66961000 -0.28453000 -0.28453000 -0.28453000 -0.28453000 -0.27523000 -0.27523000 0.08082500 0.00027728 -0.64678000 -0.64678000 0.05565800 0.05565800 0.05565800 -0.62484000 0.05993700 0.01237600 0.06504800 0.07110400 0.07110400 -0.06397200 0.00069327 0.00069327 0.11638000 0.05679800 -0.69929000 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 -0.285 -0.285 0.077 -0.313 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 -0.285 -0.285 0.077 -0.313 8.8907926 12.8955230 4.8660920 9.8743716 2.8577223 11.6931406 -0.3817613 NA 8.4351464 7.2834986 NA 7.8176392 1.2031385 9.9133578 9.3298300 0.2031385 7.9713096 9.8110722 9.6018692 10.6818950 10.1286156 7.9378352 10.5767156 3.8276158 9.8166080 9.7161949 1.2031385 0.2031385 10.9869422 1.6181447 12.0530517 12.1232301 8.0190425 10.0465231 9.1775399 9.3081608 3.0776019 1.7881010 -0.3817613 5.2620197 8.6882839 9.8288343 9.7468017 3.5723561 6.8147901 6.4319438 10.2543343 5.8660895 9.6936420 NA 11.5877293 3.8276158 3.7880906 9.8532617 6.7900904 4.5488990 10.0954152 8.5084271 7.0734904 0.6181447 13.0395046 0.2031385 11.1212433 NA 7.4093256 5.9932033 8.3730504 8.9058752 14.1808823 4.7474465 8.2180759 12.5786174 9.9718611 11.1034891 13.2583514 12.5941004 8.6209778 11.2425015 13.2190050 10.3817903 9.8989337 8.9975414 -0.3817613 7.1918104 11.7691795 10.9746149 6.6068479 8.4589409 9.0349604 9.1368161 10.5704237 7.2834986 10.1239744 11.2057061 6.7161953 0.2031385 5.9400916 7.7020944 10.5332954 10.1932294 7.9127834 9.1229820 13.5345556 5.6293916 9.7249220 10.6628985 11.0399648 10.2370072 11.1512492 9.8116882 10.8385413 8.7717149 NA 9.1282545 6.2031248 11.0112852 7.7880879 10.4784740 10.4291362 6.9801064 12.6430428 10.6546800 9.6398370 13.3404902 10.4478857 9.0264927 2.0775848 TCGA-BH-A0BW 71 0 NA 2371 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.803346e-06 5.548757e-07 10.766288 9.981644 11.755259 10.994989 8.962591 10.078724 9.169681 11.070591 10.038349 14.876762 9.801562 11.128723 4.844983 12.590160 3.951895 8.446800 5.019012 9.254808 9.297672 8.272106 NA 9.866211 6.542572 8.928599 10.406637 8.631042 0.881508 13.618171 10.022593 1.559590 8.302731 8.880380 NA 5.273825 10.557464 9.859360 9.001486 10.215110 9.666796 10.987939 NA 5.709326 14.172217 8.092461 9.715662 11.123491 12.408984 4.647044 NA 10.080198 10.776022 NA 9.022081 5.593001 7.749404 5.678520 10.151569 11.845126 9.612147 10.323207 13.058242 7.741974 10.453260 10.332929 11.490686 11.692400 6.152035 11.899151 7.998371 -1.440263 10.793498 9.562394 2.647890 6.448323 8.920426 10.156235 10.757717 10.384538 3.881508 4.749406 11.650023 11.289625 10.061416 9.318635 0.0176530 0.4938600 1.4214000 -0.5229900 0.0414610 0.4999100 -0.0194820 0.0880820 -0.5166300 -0.5330900 -0.5330900 1.0772000 0.4912600 -0.5400900 0.0092793 0.0092793 0.0092793 -0.2601300 0.1674200 -0.3211400 -0.5285100 -0.0241440 1.6396000 0.4837100 0.5327000 -0.5356300 0.4617400 -0.0284030 0.0094186 0.0176530 0.0176530 0.5046000 -0.5229900 0.0252190 -0.0410530 -0.5185800 -0.4822900 0.0880820 -0.5166300 -0.5451500 -0.5033100 -0.5253400 -0.5388800 -0.5292200 -1.0733000 -0.0019701 -0.0019701 -0.7898600 -0.5347200 0.0092793 0.0092793 0.0152770 -0.0055677 -0.2601300 0.1674200 0.0825890 -0.3211400 -0.5285100 -0.5358300 0.4666900 -0.5555900 -0.0220880 -0.5272900 -0.5356300 -0.0165240 0.0044107 -0.0200310 0.1462900 0.000 -0.535 0.000 0.000 -0.122 0.139 -0.367 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 -0.116 0.000 0.000 -0.535 0.000 0.000 -0.122 0.139 -0.367 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 -0.116 0.000 8.3956297 12.8066167 2.8074992 10.0154202 4.0809475 10.7515638 3.0190080 5.6039734 8.3442142 7.3044134 NA 10.8024319 6.4604461 11.4919786 8.6811129 0.8815080 7.4391627 11.0312545 7.0514319 8.2548075 9.9560985 8.3194676 12.8772039 2.9519048 8.4019295 10.1199121 2.3669236 NA 10.4345607 6.0107910 11.3821501 12.6841853 9.2968265 10.2993598 12.1570499 8.6390639 7.5050231 4.4175623 0.1445685 2.9519048 7.0149065 9.1151272 7.4962171 2.6470381 10.8177095 4.8815080 9.4376302 6.6417281 10.2226926 6.4962179 10.8012646 4.1141671 4.2875018 9.4946558 5.2297379 7.1889359 10.2798235 9.5057546 8.1816313 0.1445685 12.1550699 2.0190258 11.7705550 NA 9.6765730 6.0752802 7.9105186 7.5595790 11.741995 8.392469 9.523198 12.590160 10.006663 11.153904 8.272106 10.181631 8.999410 11.126109 13.361086 9.063405 10.080198 7.930267 NA 8.037338 11.344623 11.044402 6.917131 8.756796 9.033285 9.662211 10.299457 7.956184 4.709324 9.801562 5.366934 7.881507 4.019008 10.543118 13.972811 11.573425 7.954042 8.938958 11.246080 7.673322 10.974819 9.001486 10.016960 9.301046 11.866922 11.496033 10.951897 9.917131 -1.440263 9.488793 8.085100 9.022081 5.366934 10.810470 10.151569 8.434561 12.429748 10.374963 10.627014 14.222887 9.433023 9.855348 2.881508 TCGA-BH-A0BZ 59 0 NA 1492 breast stage iiia t3 n1a m0 female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 7 3 2 1 1 5 2 2 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.722155e-06 1.24847e-06 10.1379216 9.5366311 11.6063220 8.9051836 8.8190828 9.1239375 9.5272170 10.5007066 10.2569629 13.5374006 10.8067345 10.6483138 -0.1428948 12.7144840 1.4421208 9.3463300 4.3165802 8.2336379 8.9375245 12.3540047 2.4421208 12.6292593 2.8571450 9.9942232 10.6698631 7.4446157 0.5940708 10.7842622 10.4992026 1.5941185 8.9595641 7.3490043 -1.7278573 4.5941185 9.0119691 10.4607773 9.1239375 9.2183637 9.1011182 10.7645424 -0.7278573 8.2494686 15.0669977 8.3901303 10.2735967 10.8072207 10.7834469 3.7640382 5.9160442 8.4558237 10.2376120 -0.1428948 11.1303637 7.3623007 6.9691562 5.7479217 9.8453622 11.6612820 10.2767601 11.4898432 12.3036312 7.5413150 10.5462753 9.7656286 10.9613129 10.8463089 3.7640382 11.2645958 9.2672488 NA 10.4037239 9.2700736 3.1862787 6.3859314 9.8969838 9.2820172 10.7622872 10.2526851 3.3596477 7.6053439 12.1822690 11.2916054 8.9160445 9.4238393 0.1610000 0.1610000 0.1610000 -0.1080200 -0.0649660 -0.0782430 0.0388020 0.1212300 -0.2718500 0.5067200 0.5067200 0.5067200 -0.1173000 -0.1173000 -0.0533410 -0.0533410 -0.0533410 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1496500 -0.2343200 0.2490300 0.2490300 -0.0974950 -0.0974950 -0.0974950 0.3856800 0.1610000 0.1610000 -0.0366130 -0.1080200 -0.0782430 -0.1708700 0.0388020 0.0388020 0.1212300 0.1212300 -0.2718500 0.2421800 0.1373200 0.5067200 -0.0063668 -0.0063668 -0.0063668 0.0777180 -0.1173000 -0.2758300 -0.0533410 -0.0533410 -0.2439400 -0.2355700 0.0055529 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1496500 -0.0989450 -0.2343200 0.2490300 -0.1511900 -0.0974950 -0.0974950 -0.3390900 0.1112500 -0.3020400 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 0.507 0.507 0.000 0.000 0.000 0.000 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 0.507 0.507 0.000 0.000 0.000 0.000 9.5742561 13.8068561 2.5201205 9.5236709 3.6645056 11.6604749 0.2721427 -0.7278573 8.7418303 7.8113471 -1.7278573 8.4532414 -0.1428948 11.1319173 9.3007852 2.4421208 7.9268243 8.9151426 9.1783275 11.8551536 9.7954661 7.0136554 11.0753105 2.3596617 7.0795435 9.6932014 2.1790651 -1.7278573 11.1172864 1.9726191 12.3790785 13.0724311 7.9967023 10.0883721 11.0795434 10.1586472 7.1880676 3.0795488 -0.7278573 6.4570640 8.5378035 10.2084582 10.1188541 2.4421208 8.9476428 7.1487054 9.6995013 6.3056113 10.3767872 -1.7278573 9.1775755 3.7957462 4.1050746 9.7122011 5.2874354 5.2945546 9.8524470 9.4767596 9.6025452 0.5940708 13.2565624 0.8571848 10.8067345 NA 7.0203811 5.2263852 7.9881507 8.1594092 13.886726 6.756004 7.696355 12.714484 9.490752 9.966982 12.354005 11.418439 9.362963 10.349338 13.109225 9.304923 8.455824 8.120811 3.481648 7.404046 12.655353 11.022477 3.944615 8.905184 9.046976 8.781964 10.510289 8.011969 8.835385 10.806734 7.520116 NA 5.908813 8.042439 11.127641 10.824137 8.195516 9.710461 9.162453 6.857151 11.123203 9.123937 10.475231 10.305956 10.718238 9.960876 11.095556 8.556434 1.857145 9.379569 6.607579 11.130364 8.192541 11.003507 9.845362 7.768343 12.871927 10.642603 10.099928 12.082358 10.231104 9.780974 2.179065 TCGA-BH-A0C0 62 0 NA 1270 breast stage iia t1c n1a m0 female 2007 NA NA infiltrating ductal carcinoma 1 white NA 7 3 4 4 1 5 2 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.907385e-06 3.121176e-07 9.5597260 9.5018145 11.3299279 9.4593792 9.8569921 9.4050034 9.8962516 9.7937982 10.7308149 12.4041525 10.4300609 10.4054894 4.1176535 13.2869213 5.0791818 8.5117799 7.3932901 7.9411903 12.1616182 12.3588234 NA 13.5360630 6.7645452 9.5188315 10.9270429 5.4546892 -0.1302075 13.8681078 10.7273204 1.4547023 8.2555904 7.2917932 3.9141244 5.4844379 9.6445152 9.9438695 9.2084643 10.1763594 10.3957382 10.9317742 2.0396648 11.4410067 14.3535438 7.3786720 10.2933535 10.8340689 11.2983499 5.3126724 -1.1303654 9.4001344 9.6535448 NA 9.7152182 5.5279398 8.2051183 5.5135855 10.1551303 11.5629972 9.3864131 10.7807455 12.5920019 8.0396533 10.8669075 10.6058425 10.9270429 10.8788568 4.5421528 13.1525993 10.5350639 1.1916258 10.5310608 9.5198823 2.3291523 6.0985459 9.1504988 9.9378346 10.8322626 10.9283963 2.5701714 9.1574404 12.2558600 12.5118926 10.0991478 8.4917798 -0.18584000 -0.18584000 -0.22662000 0.25662000 0.69036000 0.21100000 -0.00997560 -0.24180000 0.08446500 -0.25950000 0.41546000 1.56400000 0.20763000 0.00805670 0.25386000 0.04230700 0.04230700 -0.22478000 -0.09657200 -0.44307000 0.00889200 0.43699000 -0.23349000 0.32147000 0.82686000 0.16912000 0.23225000 0.19832000 0.47621000 -0.22945000 -0.18584000 -0.04911100 -0.22748000 -0.48144000 -0.25777000 -0.22785000 -0.27806000 0.02881900 0.08446500 -0.24047000 0.03256300 0.01393500 -0.25950000 -0.09462100 -0.09462100 -0.09462100 0.48182000 0.00805670 0.04982400 -0.30794000 -0.00027724 -0.20734000 -0.19700000 -0.22478000 -0.22699000 -0.22293000 -0.22965000 0.00819590 -0.20249000 0.25027000 -0.23349000 -0.60642000 -0.25104000 0.39529000 -0.25092000 -0.24070000 0.02020300 0.00485790 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 0.000 0.000 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 0.000 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 0.000 0.000 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 0.000 9.7261536 11.9753092 7.3495086 9.0570801 5.8308891 9.9723599 4.1916574 0.4547023 8.5297237 5.8355123 NA 6.4342579 2.0396648 11.2875806 9.4926950 5.7400938 8.9195767 8.9127552 10.5381699 11.6279513 8.5255451 7.4281491 9.9277197 3.6468884 7.4584427 9.9498794 2.0396648 -1.1303654 11.8927893 2.1916574 12.4641693 12.1228369 6.8063666 10.4185500 9.6802997 9.2084643 3.1916574 3.5135792 -1.1303654 9.8976340 8.8398340 9.5959461 10.4410067 2.6770797 8.4388243 8.1271158 10.4438485 8.2812392 10.2865255 -1.1303654 10.8552142 4.4844411 3.1176618 9.6712748 6.5695427 7.5279398 9.1481776 9.9795587 8.8427080 6.0888963 13.2754014 1.4547023 10.3291597 NA 9.0308599 3.9990078 7.7766186 9.4631191 12.488680 6.029599 8.428149 13.286921 9.665768 10.540827 12.358823 12.231124 9.393290 10.135929 12.963228 11.198683 9.400134 8.467780 2.957190 8.178067 10.622945 11.485128 4.847010 8.755424 8.478907 6.264962 10.788714 8.329159 6.733914 10.430061 6.727709 1.191626 5.295991 7.919059 9.394270 11.419994 8.611195 8.189400 12.118397 8.978253 10.657937 9.208464 10.730039 10.100949 10.477983 10.147015 11.156286 8.571901 1.869714 9.134734 8.627951 9.715218 4.677085 11.338352 10.155130 7.588192 13.378946 10.237689 10.617921 12.680099 11.834971 10.061404 3.393293 TCGA-BH-A0C1 61 0 NA 1339 breast stage iiia t3 n2a m0 female 2007 NA NA infiltrating lobular carcinoma 8 white not hispanic or latino 6 3 3 NA 2 4 1 2 3 3 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 10.63658339 10.39514058 11.89022429 10.38663745 7.76131719 9.37019829 9.99928622 10.29191626 9.95587944 9.17251252 11.69241390 10.62518335 0.72132891 12.89628960 3.75692721 8.40780225 6.16755864 8.15259008 9.04232778 13.37879861 1.39938987 13.58335766 5.79169167 8.77693106 11.26065425 4.35357031 -0.60055544 8.92391514 9.80131955 2.56929665 8.95875047 6.78307812 -1.60077421 4.23226166 10.26781023 11.12367408 9.46882318 11.86110866 10.53860499 12.08072164 -0.60055544 11.06537547 15.03357471 8.57383726 9.75250927 11.21235290 11.02736323 4.68477386 3.56929665 8.95492126 11.60516668 NA 11.14294562 6.49213039 6.07885317 4.33011376 10.75555025 12.10230362 10.41478849 13.18242280 12.91538118 7.85264436 11.24152734 10.78629209 11.51409183 11.02371194 5.08587500 11.56616419 11.82524494 0.98433414 10.05803124 9.25034153 3.13000830 6.39372680 11.14882387 10.47652295 9.50724441 9.88117286 -0.01566586 10.60913136 13.01827506 12.96078072 10.85238679 9.39160363 0.615710 1.519600 1.505300 -0.150290 -0.150290 -0.155030 0.181720 0.200600 0.175610 0.186920 0.186920 0.186920 -0.130110 -0.130110 -0.135740 -0.135740 -0.135740 0.204420 0.851060 -0.156940 -0.125640 -0.484000 -0.445020 -0.089302 -0.450400 0.278840 0.278840 0.278840 0.252030 -0.436900 -0.491200 0.132140 -0.150290 -0.155030 -0.167770 0.181720 0.181720 0.200600 0.175610 0.175610 0.192230 0.193900 0.186920 -0.075345 -0.075345 -0.075345 -0.075345 -0.130110 -0.112730 -0.135740 -0.135740 -0.135740 -0.150910 0.204420 -0.484600 -0.484600 -0.156940 -0.125640 -0.462910 -0.464930 -0.456110 -0.450400 0.208240 0.278840 0.278840 0.257460 0.221450 -0.057789 -0.130 -0.130 -0.136 -0.136 0.139 0.139 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.437 1.003 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 0.000 -0.130 -0.130 -0.136 -0.136 0.139 0.139 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.437 1.003 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 0.000 9.1050057 13.7760754 9.2393644 10.0858739 2.9153870 11.8005196 0.3993352 -1.6007742 8.4600692 8.6720031 -0.6005554 8.8915671 3.3993762 10.3513866 9.3241859 1.2067057 9.1634157 10.0709145 11.8692696 8.8055785 9.3414481 7.6520390 10.4661353 2.4868431 10.2223425 10.0976440 3.2573577 -1.6007742 9.9214644 1.9843341 12.4431697 11.8961024 8.8982226 10.1909433 8.1015461 9.4458155 7.3908955 1.2067057 1.2067057 0.3993352 8.8087644 8.3477405 9.9356206 4.1272949 9.0529440 5.7656965 9.6021094 6.1807327 8.9635230 NA 11.5443502 3.6473030 5.0140830 10.3485910 5.7167852 3.8912247 9.7959783 7.3330641 6.2067292 0.7213289 14.0248540 1.9843341 9.9041923 -1.6007742 8.1889073 5.4437691 8.3564753 7.9443378 13.252488 5.907167 8.209945 12.896290 9.983866 11.576326 13.378799 11.641357 8.744779 11.089371 13.955311 11.665867 8.954921 9.316746 NA 6.167559 11.926606 11.518477 7.257355 8.881173 8.804515 8.244863 10.855158 7.321215 5.432796 11.692414 5.783077 3.684774 9.407102 7.362645 11.043004 10.117050 7.965428 7.356476 12.770401 5.244864 10.892891 9.468823 10.342254 9.534441 11.486836 9.768425 10.774684 9.275890 1.721285 9.609625 5.421742 11.142946 7.759123 10.394466 10.755550 7.046832 13.591088 9.436234 10.288497 12.712185 11.569924 9.258132 1.399390 TCGA-BH-A0C3 47 0 NA 2709 breast stage i t1c n0 m0 female 2006 NA yes mixed histology (please specify) 0 white NA 8 2 2 4 1 5 3 4 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 10.9803571 10.2207609 11.8184524 10.0585504 8.5916600 9.0055106 9.3008346 9.7339013 9.6337512 12.9532960 11.8017973 10.3586828 0.7587296 12.6133462 5.3586811 9.5781508 6.5916600 8.5483037 9.7573603 11.9458127 1.7587722 11.2256112 5.4311950 9.5034777 10.3757782 7.7012843 0.3436921 9.4320790 9.8770622 3.7129699 8.2764394 8.0255565 -0.2412704 5.1510876 9.8574601 10.6167510 9.5677340 10.2440962 9.6291347 11.6690379 -1.2412704 9.7664981 14.5893099 8.4283108 9.6245032 11.1944402 11.4028515 5.1510876 6.5531854 9.7467446 11.3730197 -1.2412704 12.1749077 6.1338101 6.8828912 5.3881275 10.4513855 11.4672073 10.0043227 12.3119192 12.7724416 8.4592099 10.9473588 10.6219767 11.6716593 11.6017095 4.8880516 12.1226310 8.9021532 3.2182077 10.6062188 8.9374347 3.5666447 5.8777099 9.5119866 10.2481163 10.4751608 10.2536256 3.2182077 7.8382547 12.8122717 12.3103581 9.3716384 9.1229046 0.0047190 1.9804000 0.3516900 0.0000000 0.0000000 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.0045695 -0.0045695 -0.0045695 0.0031910 0.0031910 -0.2887800 3.6569000 -0.2876200 -0.0107840 -0.0061964 0.0083351 0.0066653 -0.0034627 -0.0776620 -0.0776620 0.4737500 -0.0457290 -0.0457290 -0.0501000 0.0997300 0.0047190 0.0147810 0.0087528 0.0000000 0.0027745 0.0110480 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.2098300 -0.0048461 -0.0048461 -0.0045695 -0.2921500 -0.2921500 -0.2921500 -0.2959100 0.0031910 0.0031910 -0.3320200 -0.2887800 -0.2771500 -0.2771500 -0.0107840 -0.0061964 -0.0162920 0.0083351 0.0066653 -0.0034627 -0.3015700 -0.0776620 -0.0776620 0.0105640 -0.0457290 -0.0501000 0.0997300 0.0095883 -0.3250700 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 0.000 9.7942565 13.1275492 6.9336954 10.4743030 4.8242129 10.0756171 3.2182077 1.9286925 8.4400083 9.5916600 -0.2412704 9.9302783 6.0625513 10.4378101 9.2695342 4.3133620 10.7661477 9.7005512 7.2345032 11.3328904 10.2389542 7.6444663 12.2074025 3.3437347 8.5434046 9.6383532 5.5269546 NA 11.3321805 2.6656656 12.3818512 12.4338449 9.1457103 9.7983744 9.5186581 9.2882005 4.9875892 1.0807259 0.7587296 7.4557374 9.1327226 8.6656607 9.2415778 8.2161507 7.0075992 5.8672936 9.5916600 6.6352872 10.1960018 NA 11.5513569 3.5661210 4.9485962 9.4573618 6.5205213 4.9875892 9.5294339 9.4426419 6.1424747 NA 13.2961704 2.2181922 10.5044443 NA 8.6322140 6.3286265 7.4968626 9.1871301 15.167151 6.867295 8.638353 12.613346 10.552190 10.856473 11.945813 12.524367 12.153768 10.990891 13.769298 10.677261 9.746745 8.714420 1.343749 7.727437 10.767549 11.210496 5.591661 8.863369 8.723111 9.052242 9.758375 7.715872 8.701285 11.801797 5.846233 3.513655 4.803165 7.416589 11.971266 10.365638 8.914853 8.212041 12.733812 7.613638 11.298433 9.567734 10.392673 9.570947 10.509477 10.685066 10.265078 9.014979 NA 9.413656 6.336199 12.174908 7.588493 10.306147 10.451385 7.989991 13.681260 10.395848 10.303734 12.565622 10.122905 9.612079 4.313362 TCGA-BH-A0C7 48 0 NA 2767 breast stage iib t2 n1mi m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 3 5 1 1 4 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 3.121176e-07 10.55296875 10.33606945 11.71958219 10.01573952 9.06919195 8.89462438 9.95342327 10.75285035 9.39698531 14.36428506 11.63395693 10.93932944 1.75979500 13.39851748 4.01356052 8.96023020 5.55121760 8.80923275 12.08493555 12.89802567 3.99010169 14.19388998 2.91733627 9.08009347 10.36514014 3.34477170 0.38128337 9.23428910 9.48824686 3.30729737 7.24671590 7.29776827 1.05935528 3.81425304 10.11396767 9.48142812 9.00991929 10.85743009 10.32790536 11.45154665 2.22928028 12.07582350 14.22909270 10.34747388 10.29058153 11.19939427 12.05786568 4.75980565 5.87314385 9.22049538 11.01646547 NA 10.98769668 5.31675036 5.51057588 5.86671762 8.91033152 12.07930154 10.00991929 12.07059065 12.40981920 7.88908592 10.30194208 10.20348627 11.86983463 11.22301304 4.26881613 11.65834637 11.71288028 0.05935528 10.00919011 9.38016384 3.82384105 4.95418235 10.96493840 11.69723353 10.34216225 9.95872032 1.51878690 5.73884348 12.19274645 11.08207797 9.60432787 8.99526516 -0.25709000 0.55504000 0.45041000 0.03045100 0.03143600 -0.57585000 0.32339000 0.03298600 0.01944600 0.01628600 0.01628600 0.01628600 -0.26360000 0.00346870 0.07412100 0.07412100 0.07412100 -0.26985000 -0.26985000 1.36830000 -0.00304750 -0.25387000 -0.56425000 0.56970000 0.56970000 0.24031000 -0.25334000 -0.28025000 -0.07294200 -0.25709000 -0.25709000 -0.25914000 -0.55737000 -0.57585000 0.01754400 0.02609200 0.02067900 0.03298600 0.01944600 0.01944600 -0.27845000 0.02468900 -0.57697000 -0.57299000 -0.57299000 0.02609500 0.01502800 0.00346870 0.00346870 0.07412100 0.07412100 -0.56465000 -0.56853000 -0.26985000 -0.26985000 -0.26985000 -0.57467000 -0.56117000 -0.24837000 -0.24326000 -0.56640000 0.56970000 -0.55767000 0.22823000 -0.28025000 -0.57832000 -0.00027724 -0.56793000 -0.264 0.000 -0.569 -0.569 -0.270 -0.270 -0.573 -0.561 -0.248 0.087 -0.243 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 -0.552 0.000 0.000 0.000 -0.264 0.000 -0.569 -0.569 -0.270 -0.270 -0.573 -0.561 -0.248 0.087 -0.243 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 -0.552 0.000 0.000 0.000 8.46981477 13.49232932 6.56715753 9.85783516 4.54913314 10.81174403 2.22928028 -0.94064472 8.72292158 8.12679790 NA 8.42349792 5.22928797 11.16265120 9.55771393 6.39921383 8.79576532 9.34822954 8.15739545 10.17049908 9.40905377 7.88273046 10.29657338 1.38128337 8.55221797 9.49815531 2.75979500 4.38129030 10.65298798 2.75979500 12.16821451 11.62410834 8.19250538 10.36371470 10.62874435 8.95114714 5.25903516 1.64431778 0.86671020 4.10375779 8.91578887 9.12073450 10.81048897 4.87954404 8.13397342 6.75633081 10.81216214 5.42568420 10.61083135 NA 10.92296892 2.75979500 4.01356052 9.41491816 6.39640613 3.30729737 9.63820782 7.92354974 5.58292626 -0.94064472 13.23549758 0.05935528 10.56691027 NA 7.77360871 4.86672009 8.10375726 8.62446540 11.985658 8.399213 7.744112 13.398517 11.596072 11.296424 12.898026 13.441210 9.667156 10.896794 12.773341 11.761753 9.220495 8.686897 1.966246 8.561200 12.384880 11.1192148 6.9111127 8.4866762 8.9587203 10.7218093 10.6616262 6.4687544 8.8537793 11.6339569 6.8209142 2.3812834 4.8407251 9.4336585 10.7860073 10.3164566 7.9989424 9.1037575 11.7901519 5.6592767 12.1856847 9.0099193 9.6315900 10.0999956 11.7645638 10.0370011 11.1722915 9.2342891 0.8667102 8.9012736 5.6367928 10.9876967 7.6850725 10.9015173 8.9103315 7.9358805 12.9778540 10.1321659 10.5036019 12.7847297 10.6002179 9.7813169 0.8667102 TCGA-BH-A0DD 58 0 NA 1394 breast stage iib t2 n1a m0 male 2006 NA NA infiltrating ductal carcinoma 0 white NA 3 1 1 2 3 5 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 11.04776930 10.22831342 12.03999324 10.03819280 7.99379888 9.45178828 9.33462704 10.29537027 9.08498692 14.29111809 11.31869628 11.13570929 1.94542043 15.15513822 4.53039541 8.76909234 6.61012569 8.72082156 9.22831342 12.85621463 NA 13.65365737 1.80793188 8.49583265 11.48494697 3.39289439 0.07093882 8.63828892 10.95284526 3.69545938 7.48318375 6.96578428 1.80793188 3.34399047 9.65028241 10.49723132 9.15045128 11.34922239 10.09979344 12.21488112 -1.51416103 11.51304605 14.21232863 9.24899229 9.28041980 10.98485320 13.38304586 5.40486566 2.80793188 9.33775301 11.54484135 -1.51416103 11.56215154 5.17250352 4.97785689 4.15842590 9.62043026 12.50628953 9.73866939 12.11399380 12.73059084 8.01152471 11.53670298 11.06501350 11.63352698 11.33638622 5.84355680 11.98597443 11.85995666 -1.51416103 10.16240190 9.24256035 3.62104378 4.55209421 9.70335597 9.16899872 10.12805569 10.68782163 5.81691964 9.24422729 12.50115769 11.31016724 10.62715319 9.18904248 -0.49965000 0.48051000 1.41530000 -0.00470790 0.01251600 0.01922300 -0.00455900 -0.00496850 0.02108100 -0.01257600 -0.01257600 1.46530000 -0.01972600 0.00000000 0.42839000 3.65690000 0.96843000 -0.03059200 0.51263000 -1.24510000 0.02174400 -0.01216200 3.65690000 3.65690000 1.52420000 0.34909000 0.37479000 0.37479000 0.48027000 -0.61278000 -0.49965000 0.00305220 0.00805670 -0.01230000 0.03383100 0.02104300 0.02104300 -0.03523100 0.02279600 -0.03265300 0.49441000 0.44763000 -0.02197200 -0.01656700 -0.01656700 -0.01656700 -0.01656700 -0.00596240 -0.00596240 -0.06424000 -0.59195000 -0.53551000 -0.53551000 -0.00069303 0.51943000 0.47392000 -0.85623000 -0.02374400 -0.01174900 -0.03817000 -1.15450000 -0.08213700 0.52958000 0.37792000 0.37479000 0.47129000 0.04216600 -0.05805800 0.000 0.000 0.000 -0.536 0.460 0.460 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.999 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.460 0.460 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.999 0.000 0.000 0.000 0.000 7.88901594 12.29938439 8.73866956 9.16899872 4.39289439 10.62139266 0.07093882 NA 9.12805569 7.41969478 NA 6.94850624 1.65594710 9.99280751 9.43144788 5.02516171 7.50837160 9.78119904 8.41526262 9.88421326 9.39827212 8.23083801 9.19077237 1.57177388 9.88100258 9.81523982 1.07093882 -1.51416103 11.55175670 3.39289439 12.00809508 11.38233643 7.30937085 9.85560139 10.53992988 9.29978521 5.80793188 3.73392913 0.80793188 2.18643717 8.49862865 8.11171263 10.04203100 2.48599349 7.31086722 5.70517342 9.77775027 7.02127983 8.75161904 -1.51416103 11.42595049 2.29337048 3.77141023 9.91591806 6.20505033 3.39289439 8.65592886 7.29978498 4.48600637 -1.51416103 13.26987192 -0.51395501 10.91932861 NA 7.41378192 3.77141023 8.75746702 7.20368080 16.020608 6.122629 8.440200 15.155138 8.356800 10.839978 12.856215 12.806029 9.767279 11.056571 12.805535 11.005395 9.337753 9.762128 2.070973 8.512528 11.937859 11.132113 8.741032 8.342429 9.464714 10.352124 10.898532 6.193364 5.886884 11.318696 5.440201 1.070939 8.615287 9.646890 11.233568 9.474689 8.030968 8.109885 13.194926 4.695459 11.696342 9.150451 10.245892 9.405612 11.754400 9.624916 10.634798 9.025163 4.213923 8.353870 4.675827 11.562152 7.533128 10.357524 9.620430 7.850139 13.139689 9.553438 9.508372 12.546024 11.333844 9.942358 1.945420 TCGA-BH-A0DE 62 0 NA 2372 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 2 NA NA NA 3 4 2 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 10.6291661 9.8743922 11.1039553 9.2347104 8.7916773 8.3388915 9.2347104 9.9403623 11.0397417 13.2464342 9.4293858 10.4028284 1.2602666 13.5374380 3.5822188 10.5086188 5.5701502 8.7929764 9.3128639 12.7393182 NA 13.1956451 3.5333142 9.3359711 10.2654526 8.9017454 -1.3248164 12.1302752 8.4134257 2.8452492 7.9374280 8.1408998 -1.3248164 5.7087556 9.4883130 10.6876087 9.2649846 10.3173850 9.4599682 11.1586453 -0.3246357 10.3468745 14.8078130 7.7387557 9.9983882 10.9639111 11.4256216 5.4167992 4.7627953 9.0218472 11.8396118 0.9972563 11.1023843 5.5208245 6.6583272 5.0151853 10.7471309 11.4937158 10.2227099 11.8287271 12.6209601 8.5867253 11.0348085 10.8584384 10.9873654 10.7867951 4.3757762 11.6338861 9.2028105 -1.3248164 10.5960584 9.1439574 3.7632203 5.5208245 10.0724732 10.0190743 10.3870004 10.3688204 3.8046215 8.3565717 12.7264573 12.1760508 9.6816594 9.2546493 0.0240310 0.0240310 0.0370760 0.0140510 0.0140510 -0.0098185 0.0160060 0.0175440 -0.5366200 0.0157270 0.0157270 0.0168450 0.0000000 0.0000000 0.0214750 -0.5170200 -0.5170200 0.0148880 0.0148880 -0.0095426 0.0102850 0.0016642 -0.5199300 0.4481600 0.4481600 0.0065262 0.0065262 0.0065262 0.0293250 -0.5130000 0.0240310 -0.0124380 0.0140510 -0.0060904 -0.0098185 0.0160060 0.0160060 0.0175440 -0.5366200 -0.5366200 0.0129340 0.0129340 0.0157270 -0.0122960 -0.0019399 -0.0019399 -0.0019399 0.0000000 0.0000000 -0.5148600 -0.5170200 -0.5228700 -0.5228700 0.0148880 0.0148880 0.0148880 -0.0095426 -0.5301500 0.0016642 -0.5355100 -0.5199300 0.4481600 -0.0055375 0.0065262 0.0065262 0.0293250 -0.5266500 0.0158660 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7534842 12.4275049 7.6977009 10.4302209 2.9972563 10.3087828 1.8452692 0.6753643 8.4285503 8.6193132 -1.3248164 8.4303045 5.1182767 10.2125518 9.4041042 -0.3246357 8.7994545 9.7568168 9.9244469 9.7674299 9.6670466 7.6949241 12.3111648 3.9607341 7.1429392 10.2447143 5.2752455 NA 11.2930304 3.0676559 12.4699523 11.5424190 8.9268157 10.3397806 9.0547118 9.0857847 4.8046164 3.1989027 1.2602666 4.9421203 8.1949696 9.2743164 9.7400762 6.7786212 6.5749325 6.9791142 10.0427482 6.3406691 10.0000765 0.6753643 10.6001459 2.9972563 7.7707306 9.7715017 6.0740772 2.1347795 9.7733654 9.3723009 5.0847234 -0.3246357 13.6033890 0.2602666 10.3578891 NA 8.1791592 5.6640191 7.8552423 8.5518505 12.542563 3.960734 8.873778 13.537438 10.631710 10.133740 12.739318 12.368494 8.627346 10.446410 13.076346 11.250400 9.021847 7.932721 1.260267 7.683762 10.489515 11.0279286 7.2375761 9.1949696 8.9065545 8.5971743 10.3084286 6.8552423 5.8250809 9.4293858 8.0655023 2.6753417 7.5208237 6.1638167 11.2715231 10.2120662 8.4583316 8.4875109 11.3462109 5.0328855 11.4745057 9.2649846 11.0129553 9.3792369 11.1981601 10.2992149 10.3605202 8.5792152 0.9972563 8.8678112 4.4566945 11.1023843 7.0762127 11.2473230 10.7471309 7.3335445 13.3714859 9.8805156 10.1322011 13.0030965 9.9338994 9.8282520 0.6753643 TCGA-BH-A0DG 30 0 NA 713 breast stage iia t2 n0 m0 female 2007 NA NA infiltrating ductal carcinoma 0 black or african american not hispanic or latino 2 2 2 6 2 4 3 4 4 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 6.935946e-08 9.6158404 10.1149999 11.4845136 9.5175088 9.1661495 9.1225731 10.5121647 9.8245890 10.4872398 14.5863634 10.0381419 10.7618902 1.0597014 12.1769709 2.8252565 9.2226124 5.9077151 8.4910061 8.9176985 12.6452434 0.3227358 13.4118713 5.0597187 10.1512481 10.4817822 8.2155476 1.9076983 8.9892719 10.5326113 4.5957722 7.5451444 7.4758817 NA 5.4520353 9.6640853 10.3906344 9.9214247 10.2923782 10.1895156 11.2974055 5.0597187 10.8338456 14.9959137 8.1757701 10.2803377 11.5799432 10.5583672 4.6685276 5.8875375 9.3879436 11.0324101 0.7377733 11.2000360 5.9077151 6.6977919 5.4520353 9.8508804 11.7519842 9.9239036 11.9642016 12.5557723 7.6506784 10.8446794 10.5544170 10.8245890 11.0801418 4.6685276 11.5619526 10.6081541 1.5451282 10.4141872 8.8252523 3.7095664 6.2296418 11.6538554 10.2485536 10.4498864 9.5555725 3.9472453 9.9114664 12.6154569 11.9172320 9.8644938 9.5635431 0.00107960 0.67326000 0.59314000 0.00624810 0.00138680 0.00792280 0.00013863 -0.00336740 -0.00336740 -0.37110000 -0.00186160 0.01866300 -0.00716710 -0.00716710 -0.00166290 0.35920000 2.93350000 -0.39730000 0.01318700 -0.00346270 0.35920000 -0.00567570 -0.01972600 -0.40141000 3.65690000 -0.03408600 -0.03408600 -0.03408600 0.33993000 -0.41091000 0.00107960 0.00000000 -0.37932000 0.00752710 0.00944910 0.00013863 0.00013863 0.00182710 -0.00336740 -0.00336740 -0.00727060 0.00610900 0.94895000 -0.02414900 -0.01225300 -0.01225300 -0.01225300 -0.00716710 0.00166420 -0.00011024 0.35920000 -0.38448000 -0.38448000 -0.39196000 0.01474900 0.01474900 -0.00346270 0.10293000 -0.01356900 0.00497680 -0.01972600 -0.40506000 -0.00512270 -0.03408600 -0.03408600 0.52083000 -0.00373950 0.02188400 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.148 -0.148 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.148 -0.148 9.7455175 13.6458066 5.7264743 10.1306434 4.3149140 11.6471200 3.9857190 1.5451282 8.6566526 9.1418665 NA 9.0490949 3.8670761 10.1122855 8.8567305 1.3227358 9.5459491 9.7236313 9.0010585 10.6093096 9.8788810 7.9325461 11.3766778 2.9077175 9.1545870 10.4360600 4.8252514 NA 11.7227418 3.1301072 12.2957317 11.8219334 8.3888409 9.9773878 9.6288135 9.8926075 7.0820852 2.5451529 -0.2622267 5.8146043 8.4657096 8.3114364 9.9732053 5.4382296 6.8794362 6.0776404 10.3288441 6.9714090 10.7971338 NA 11.0455594 3.7377841 5.2613503 9.4927353 5.4412776 5.6326085 10.0415702 9.1084769 8.4640074 0.7377733 13.4120920 1.9076983 11.0124587 NA 7.9251414 6.5515698 7.8747804 8.7321427 12.722614 5.668528 8.453751 12.176971 10.469533 10.755642 12.645243 12.041142 10.813603 10.293337 13.077570 10.262821 9.387944 9.868360 -1.262227 10.385248 11.519354 11.660188 6.431277 8.592658 9.178659 7.396001 10.741370 7.462303 9.698515 10.038142 5.825251 4.668528 6.861911 8.361707 12.745868 10.525692 7.879896 8.635635 11.209465 7.326504 11.065171 9.921425 10.947852 10.099185 11.095341 10.391978 10.977686 8.807910 -1.262227 9.465387 7.538689 11.200036 8.760157 11.051846 9.850880 7.213523 13.482781 9.618138 9.907714 12.260861 10.792394 9.670742 2.825256 TCGA-BH-A0DH 63 0 NA 1156 breast stage iib t2 n1a m0 female 2007 NA NA infiltrating ductal carcinoma 3 white NA 3 1 2 3 3 1 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.733986e-07 9.1438311 9.5030911 11.2777961 9.2582002 8.7651276 9.4910686 9.1409486 8.7424866 9.3600396 13.4721760 9.5030911 10.5902018 NA 13.2564258 3.2340567 8.5105545 6.3517538 8.0331454 9.6630042 12.9115662 1.5901948 13.7281935 6.0820553 10.1896451 10.8030021 8.1428708 1.1751733 8.6803142 10.2692419 1.5901948 8.3813647 6.1137630 -0.4098531 5.7500732 9.8534710 10.1152332 11.1891847 11.4099817 9.3282941 10.8939825 12.2427107 9.9565240 14.0547475 6.2539023 11.8064929 11.1600574 10.7227015 4.0496308 4.4970950 8.4103805 11.5312494 NA 11.4309797 6.1524451 5.7701102 3.8381248 9.8045209 11.3590064 10.2621851 12.8136756 12.5995930 8.8779141 10.1863915 9.9835922 11.1896498 10.1868574 3.7996572 11.9329709 10.5613860 NA 10.0372850 8.8178177 2.6776661 5.0496351 10.5238924 9.1685743 9.5845552 10.0398663 2.6776661 9.4023790 12.2023792 11.1706959 9.5392990 9.8876913 0.00000000 0.00000000 0.00000000 0.00416320 -0.00498440 -0.00089716 0.00069327 0.68589000 -0.78555000 0.00235810 0.00235810 0.73891000 0.01098200 0.01098200 0.00563140 0.00638710 0.00638710 -0.77634000 -0.00360110 -0.77546000 0.00402430 0.02036900 0.01181800 0.01181800 0.01181800 0.00221930 0.00221930 0.00360760 0.03608800 -0.78732000 0.00000000 -0.79620000 -0.78479000 -0.00089716 0.00249690 0.00069327 0.00069327 0.68589000 -0.78555000 -0.78555000 -0.00124730 -0.00124730 0.02426800 0.01377200 0.01377200 0.00264790 0.02496900 0.01098200 0.01098200 0.00563140 0.00638710 -0.78488000 0.03947800 -0.77634000 -0.00360110 -0.00360110 -0.77346000 -0.00303790 0.01433000 -0.77634000 0.01181800 0.01181800 -0.77073000 -0.00526100 0.00360760 -0.78007000 0.01810300 -0.78766000 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 0.713 -0.063 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 0.713 -0.063 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 -0.158 8.2714402 12.0770368 5.1293613 8.7626292 -4.7331235 10.4989696 2.0496308 -1.4096615 8.9597991 6.6508981 NA 6.8238220 2.5901948 10.3939292 8.9846645 -0.4098531 6.6454841 8.0618772 12.0363805 10.1167010 9.3819508 7.5646167 10.6713523 3.3975566 8.5703415 9.3095905 4.6776661 NA 10.3898881 2.3975566 12.0556406 11.6424301 7.2484134 9.6153413 7.8238213 9.6454843 1.7601358 0.1751733 -1.4096615 4.7399507 9.5142720 10.4254627 11.1404676 5.3450876 6.2780331 7.8709725 10.4978436 4.0164696 9.8333757 -0.4098531 10.5649748 4.2626286 4.1751653 9.8754941 6.2663705 7.2555376 10.8680703 7.7525934 12.6969283 NA 13.5350511 -1.4096615 10.2902079 NA 6.1751633 4.4230941 8.2430468 7.1486220 13.3504773 4.5902008 8.8129968 13.2564258 9.5516516 10.6703531 12.9115662 12.9561824 9.5452703 9.8202222 12.6935715 7.8262161 8.4103805 8.2067507 -0.4098531 7.6291205 10.4376507 10.606314 5.358386 8.990014 9.485020 8.554543 9.814101 6.544399 6.856988 9.503091 7.690864 1.912113 5.276701 6.569541 9.587381 10.282381 6.739949 9.049633 13.691726 7.125478 10.394038 11.189185 10.720129 9.879644 9.282817 9.273196 10.625688 8.631861 -1.409661 8.244802 8.351753 11.430980 4.965239 9.794773 9.804521 7.642770 13.570207 10.121583 9.887691 12.447308 10.142871 9.598630 2.497101 TCGA-BH-A0DI 63 0 NA 912 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 2 1 6 2 4 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 9.9966598 10.5909677 11.6881467 9.4589651 8.6513976 9.0268136 9.8045168 9.8204952 11.1737290 14.3025011 10.5339649 10.8906007 -0.2689906 13.1933552 2.9009730 10.6899598 5.8499868 8.5222076 7.9574567 11.9947540 0.7310094 12.8579911 5.4452897 9.5367886 10.1996687 8.3402235 -1.2688168 9.7154631 9.4236601 2.0529723 9.2188848 7.4175454 -0.2689906 5.7754378 9.8788856 9.8369533 9.3703853 11.5882482 9.4262729 10.5070664 1.7310529 8.9258016 15.4574890 7.2845586 10.0359664 10.8744279 11.2178797 5.2546054 5.7971349 11.2067781 12.2726253 NA 11.5496269 6.9694498 5.8499868 6.1319249 10.2148604 11.5804498 10.6390619 12.5577918 12.5250543 8.5335610 10.9661614 10.5168650 11.3360611 11.1695767 4.5124039 11.4227882 11.2997134 -0.2689906 10.6228283 8.8224800 3.1240468 5.4725105 10.2653476 9.8972077 10.2546067 9.3337435 4.8395666 10.9928458 14.1950479 12.0764499 9.7366693 10.0204872 -0.00054560 -0.00054560 0.30602000 -0.33172000 3.65690000 0.00417210 0.27207000 0.00458890 0.00347760 3.65690000 0.01480000 0.34975000 -0.01048800 -0.01967800 -0.30979000 2.31390000 0.22100000 -0.00068419 -0.00068419 -0.02259800 0.00638420 0.01154800 -0.32158000 -0.00870580 0.31098000 -0.01049900 -0.01049900 -0.01049900 0.00806560 -0.00054560 -0.00054560 -0.00662320 -0.32495000 -0.32798000 -0.32390000 0.26535000 0.24514000 0.00458890 -0.32866000 -0.33259000 0.00117950 -0.33940000 -0.31738000 -0.32076000 -0.32076000 0.00306100 0.00306100 -0.01967800 -0.01967800 -0.30979000 -0.02204900 -0.32206000 -0.31341000 -0.00068419 -0.00068419 -0.00068419 -0.02259800 0.00860470 0.01531600 -0.00189910 -0.32158000 -0.00870580 0.00834400 -0.01049900 -0.01049900 0.00264450 0.00750890 0.00653510 0.000 0.000 -0.288 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 -0.288 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 9.5796676 14.7657792 8.7917405 10.7018696 1.9774631 11.2171255 2.5383892 0.3160299 8.7603317 9.7890364 -0.2689906 9.0604598 2.0529723 10.1271143 9.0808788 2.0529723 10.1201382 9.3512646 9.0597195 10.5952308 9.2383140 7.1276498 11.8095291 3.6852450 8.1573095 10.4440015 5.0529723 NA 11.1044536 2.0529723 12.7006111 12.7283124 9.3856808 9.4555586 8.6939406 9.3604014 4.8185080 2.3160009 -0.2689906 4.5124039 8.5718228 9.8473886 11.4863496 5.7534120 7.8076731 5.1739869 9.8890231 6.6735593 9.9233374 NA 11.6035272 4.0885996 4.9978298 9.4115800 6.1066917 7.0118154 9.9754085 8.5432221 8.9514231 1.7310529 13.6690621 1.0529723 10.8842801 NA 7.5983235 6.3160063 8.0187571 9.1136687 12.361581 5.613688 8.276009 13.193355 10.205258 10.570642 11.994754 10.762057 9.425403 10.812195 13.316418 10.649908 11.206778 8.522208 NA 7.535176 10.472090 11.869636 7.849986 8.595231 9.006005 7.535176 10.375586 7.148898 7.452144 10.533965 7.643934 3.190473 5.818508 6.743502 12.514759 10.390595 7.823802 8.648417 11.510148 6.708325 10.499982 9.370385 10.522615 9.913439 10.246252 10.249698 10.924878 8.771334 9.091892 9.472444 7.592132 11.549627 9.070895 11.084699 10.214860 7.270204 14.123932 10.077004 10.167236 12.967806 10.590191 9.668418 3.900973 TCGA-BH-A0DK 49 0 NA 423 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white NA 3 2 2 2 3 5 3 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.115464e-06 4.855162e-07 9.5743593 9.6723044 11.4510720 9.2681015 8.2318457 9.0781618 9.3499785 9.5424991 10.5559316 13.8786790 9.3177830 10.6955901 1.1700532 11.5927648 2.5485846 9.6490411 6.8979894 8.4084741 9.3834166 12.4176408 2.1700853 13.4218475 5.0180644 9.7363136 10.3589053 6.1335430 -1.1520031 10.6971552 10.1507801 0.4330663 7.9978885 7.9061330 3.7550371 6.4027307 9.3726829 10.5879218 9.4738500 9.9169195 9.6130128 10.8867173 1.6554892 10.5059062 15.1968521 8.4961391 10.6534820 11.1046447 10.5210084 4.5485784 4.9142296 9.5786114 11.4854453 NA 11.4550090 6.5896077 7.2056936 4.8254193 9.9047790 11.6740937 10.1723217 12.2913438 12.6097963 8.1427621 10.9573189 10.2974755 11.1860418 10.9582982 4.3399925 11.4928988 11.5946555 0.8481572 10.3756182 9.0673096 2.3578335 7.5205668 10.9302902 9.7684940 10.0533236 9.5072452 3.8925367 9.7602820 12.8519226 12.5279511 9.4765866 10.5263012 0.00765390 0.52485000 0.51455000 0.00708260 0.52241000 -0.00609040 0.00763920 0.00000000 -0.00825050 0.01279500 0.00507150 0.00507150 0.01140000 0.01038600 -0.52798000 -0.53073000 -0.53073000 -0.52961000 0.00159430 -0.54121000 0.01600600 0.02076300 -0.52736000 -0.52736000 1.26730000 0.00638710 0.00638710 0.01042400 0.03369000 -0.52440000 0.00765390 -0.00788630 -0.54260000 0.02426800 -0.00609040 0.00763920 -0.00062611 0.00000000 0.00000000 -0.00825050 0.01070300 -0.04915400 0.01553700 -0.53297000 -0.53297000 0.00652620 0.02398700 0.01038600 0.03990200 -0.52798000 0.01167900 -0.53073000 -0.53073000 -0.52961000 -0.00640170 0.54294000 -0.53666000 -0.00154490 0.01488800 -0.52092000 -1.04350000 -0.52736000 0.01600600 0.00638710 0.00638710 0.03369000 0.01363200 0.03199900 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 0.000 10.0067509 13.3859056 6.3873005 10.0010598 4.6790071 11.3741513 3.9356012 0.8481572 8.6376747 8.8979897 1.6554892 8.8052431 3.8023380 10.6225165 9.2231807 0.4330663 10.1796180 9.5477136 9.7123273 10.2296842 9.5390558 6.9142308 12.0045403 2.8481372 8.2296840 10.3404952 6.0769609 NA 11.0630674 2.7550371 13.4137193 12.1075902 9.2500873 9.8132040 10.3344734 9.7899224 4.9774265 3.4331063 -1.1520031 4.2744033 8.3658106 10.3374874 9.9162476 4.7788761 6.6914337 7.2012878 9.9095124 6.3075724 9.7384054 -1.1520031 11.0685195 4.8481422 4.7061216 9.3614346 4.9287967 7.6873449 10.0527123 9.1857630 11.6500516 6.1149271 13.9458441 3.2404517 10.4457283 NA 8.4368560 7.1055293 7.7277245 8.8066940 12.195260 6.291084 8.238310 11.592765 10.277025 10.501434 12.417641 9.978068 8.663524 10.369251 13.314728 11.550747 9.578611 8.928959 1.433120 7.201288 11.539449 11.2242665 5.9356035 9.0829585 9.4065620 7.7307839 10.2805996 8.2972900 9.0392004 9.3177830 7.8788081 1.4331197 5.9356035 7.6624355 11.5959146 10.5925546 8.0054881 8.4160974 11.9809622 8.0280503 10.1512712 9.4738500 11.1122905 10.0907198 10.3504758 10.5653892 10.9873727 8.9474891 0.4330663 9.1070251 8.9915244 11.4550090 7.0130479 11.0972546 9.9047790 6.9461729 13.9008790 10.3039821 9.8822524 12.3265316 11.1782177 9.3489830 4.8481422 TCGA-BH-A0DL 64 0 NA 2381 breast stage iia t2 n0 m0 female 2007 NA yes other specify 0 white not hispanic or latino 4 4 1 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 1.733986e-07 10.0455211 9.5628741 12.0452048 9.6815650 8.5082452 10.0463640 11.5353678 10.6497477 11.2306369 13.3289545 10.3307287 10.8493785 0.8898629 10.9695665 1.7643462 11.3926913 5.0328194 9.0681094 9.0429893 4.7967483 0.3048615 10.0854367 8.0446777 9.3190360 10.9214459 6.6536247 0.3048615 10.2345253 11.0094491 1.1122331 9.7684214 8.9378922 -1.6952553 5.9122283 9.5786925 10.0264234 8.9878916 10.7917320 9.2378500 10.8059878 -0.6950218 9.0763865 14.4998462 7.6981372 9.3696399 10.5158727 9.7174669 2.4748254 NA 10.0387598 12.4629544 -0.1101371 11.2057638 5.0053371 7.4495556 5.0191414 10.5459864 11.9615453 10.2144152 11.2973044 12.8877446 4.8440542 10.7308997 10.1717586 11.1712100 11.7323408 4.8126933 12.9661184 8.8077288 -0.1101371 9.6596973 10.0005603 3.3138843 5.2706822 10.8764127 9.4463656 9.8742780 9.9319749 -0.1101371 10.4562308 13.1122016 12.5016528 9.7735210 9.7836667 0.5478800 0.5478800 0.5478800 -0.2896400 1.6138000 -0.2464200 0.6095500 -0.1093300 -0.1093300 0.2601200 0.8102500 0.8102500 -0.0776110 -0.0776110 -0.2930100 1.1595000 -0.0310860 0.4947600 -0.0438730 -0.2974800 0.2004500 0.3652600 -0.2241400 -0.2241400 -0.0280810 -0.0797420 -0.0797420 -0.0797420 0.3339900 0.4356700 0.5478800 0.2039600 -0.2896400 0.2175200 0.0417410 0.0000000 0.0000000 -0.1093300 -0.1093300 -0.1093300 0.2084000 0.1286600 -0.3002800 -0.2815600 -0.8207300 -0.0818710 -0.0818710 -0.0776110 -0.0776110 -0.3002800 -0.1534900 -0.0310860 -0.0310860 0.0228650 -0.0438730 -0.0438730 -0.4680500 0.2004500 0.2757900 0.2157600 -0.2241400 -0.2241400 -0.0088526 -0.0797420 -0.0797420 0.3339900 -0.0645080 -0.5189700 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 -0.182 0.076 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 -0.182 0.076 8.8860977 13.4559136 5.2356352 8.6961406 3.9487503 10.3372872 2.5528197 8.6234397 9.4741957 8.8614030 -1.6952553 6.9878916 9.5786925 10.8707131 9.4578157 3.2590917 6.9122271 10.8399294 7.7806303 9.7057765 9.4721835 6.8898592 9.8642741 4.1875382 7.2821766 10.4286952 2.2117910 NA 10.7261729 4.8747527 12.7438838 12.8008145 6.8633178 9.1250761 11.8771235 8.7581676 5.7643276 3.0053281 -0.1101371 -1.6952553 8.2836074 9.4153803 6.0730811 2.3923724 9.8901694 8.5611058 10.1126544 8.5397145 9.2850366 0.6268596 10.3807104 3.6268246 4.1377904 9.5145271 5.5869659 7.9826166 9.0165640 9.3540649 9.2532641 12.4199407 13.4690183 -0.6950218 10.7982521 NA 9.1258737 2.7643249 8.4622438 7.9487533 13.3361373 6.8747527 8.2072721 10.9695665 10.0952455 11.1248765 4.7967483 9.7524969 8.9992548 11.5917161 13.5370556 11.1766098 10.0387598 7.0463645 0.6268596 8.1122518 11.0664483 10.254724 2.764325 9.794745 8.947851 9.469804 9.580771 7.092799 9.230451 10.330729 3.764325 -1.695255 8.762278 9.797842 12.785561 10.266347 8.830418 9.189067 8.229710 8.287891 11.031822 8.987892 10.968900 9.640846 11.270862 11.477481 10.455279 9.058949 NA 9.743086 9.748877 11.205764 4.552826 10.942880 10.545986 8.124086 14.069587 10.840415 10.846962 13.325183 9.939708 9.412114 3.059788 TCGA-BH-A0DO 78 0 NA 525 breast stage i t1c n0 m0 female 2009 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.733986e-07 10.7360844 9.7048561 11.9273386 9.5581048 8.2662665 8.7732899 11.0586302 9.4590184 10.7942117 12.8810810 11.3616602 10.4409374 0.5468574 12.9770034 3.6343377 9.6651698 7.5581046 8.5953645 10.5327195 13.3052569 1.7168153 13.7794859 7.5636859 9.5523267 10.9562685 5.6343406 NA 8.4637573 7.3510090 4.2747984 7.4687185 7.4141567 1.3542265 3.5468821 10.3546350 10.4761360 10.3939349 11.4825951 10.3610595 12.0714193 8.1052983 12.0661452 14.3482575 6.8724976 10.3534272 11.7326822 11.3724327 5.8414977 3.6761658 8.9219171 12.1031441 -0.4530438 10.8259077 4.1318364 5.5692450 3.9731429 10.2082103 11.9611664 10.4405583 12.7615002 12.9647960 8.3970645 10.8908960 10.7076692 11.4513240 11.3308989 5.1467896 11.9626193 11.8755525 0.1318528 10.0850665 8.8264881 4.2761616 3.5912725 11.0286770 10.7810962 10.2442795 9.9583886 4.0387347 10.8130784 13.6585023 12.4367617 10.2399288 9.7477761 -0.00719580 0.76523000 0.76523000 0.00000000 0.00000000 0.00097064 -0.00055444 -0.00429290 -0.00429290 -0.00456950 -0.00456950 -0.00719580 -0.00589860 -0.00011988 0.39214000 0.38899000 0.38899000 -0.00816240 -0.00816240 -0.00174130 0.00138680 -0.00235530 -0.01807800 -0.01807800 -0.01807800 0.35218000 0.35218000 0.35479000 -0.01041600 -0.00719580 -0.00719580 0.00277450 0.00000000 0.00097064 0.00056701 -0.00055444 -0.00124730 -0.00429290 -0.00429290 -0.00113050 0.39562000 0.39562000 -0.00456950 0.00041593 0.00041593 0.00041593 -0.01387500 -0.00011988 0.00597000 0.39214000 0.38899000 0.38899000 0.38899000 -0.00816240 -0.00816240 -0.00816240 0.00152550 -0.00899060 -0.00235530 -0.43102000 -0.01807800 -0.01807800 0.00666530 0.33003000 0.34523000 -0.00110870 0.00680440 -0.01464100 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 0.000 8.1907339 11.7153930 6.4716898 9.5426448 4.5075727 10.5678575 2.5468821 0.1318528 8.7080096 8.5553062 -1.4532413 8.1542080 3.0063160 10.0332097 9.8523694 1.3542265 8.6514762 9.7230506 10.2786209 9.1680137 9.8684619 8.0306931 10.3416995 1.5468574 9.9991188 9.9005758 3.1907413 -1.4532413 9.8800328 4.4776126 13.4515592 12.0975041 7.3702445 10.4325739 7.1871224 9.2959090 5.2883438 1.5468574 1.1318528 0.5468574 9.0114232 9.3134064 10.6143119 6.2193021 7.9895932 6.2815870 10.3852936 6.9898214 9.5383995 -1.4532413 12.3300804 2.2473199 4.6761602 9.8263953 6.2801639 5.3017669 9.1780545 7.1430668 6.9391948 NA 13.9298730 0.1318528 10.0512000 -1.4532413 7.7440945 6.1318405 7.4981623 8.7792985 13.1448137 4.9219171 8.3923677 12.9770034 10.5709783 10.9340871 13.3052569 12.7918359 9.7205547 10.9175650 13.3594560 10.5806447 8.9219171 9.3726313 0.8688448 7.2984219 11.8184865 11.118156 8.086036 9.224597 8.375014 7.658013 10.358529 5.868805 6.489392 11.361660 5.512663 5.038730 7.363861 4.818155 12.490491 10.310505 8.310090 8.124306 13.697141 6.546877 12.489001 10.393935 10.237749 10.202408 11.290029 9.694083 10.680662 9.451512 NA 9.478206 7.462757 10.825908 5.804265 10.842354 10.208210 7.208656 14.114475 10.092807 10.935433 13.230311 10.819507 10.178509 2.006298 TCGA-BH-A0DP 60 0 NA 476 breast stage iib t3 n0 (i-) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white NA 5 2 3 3 2 4 3 3 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.427581e-07 10.7055917 9.7399868 11.7788700 9.5260066 8.2515193 9.4765184 9.8187883 9.8126126 10.3481438 11.9581891 11.4293139 10.4782534 5.5459992 12.6480821 3.4216677 10.7732276 6.5787138 8.4162495 11.4089907 12.8920440 0.3627785 14.0250366 7.4713005 9.2672303 10.4171544 5.7320114 NA 12.3379136 8.7890409 2.8652854 7.7464807 8.1375635 -0.2221280 4.9872663 9.8036454 10.0844450 10.1544817 12.1613830 9.6334608 11.5550690 4.6847065 10.6283912 14.7676295 8.0769989 9.7399868 10.9192823 11.3244670 5.4071692 2.8652854 9.1042431 12.1066289 NA 11.5347869 6.8599633 6.3400566 5.1353666 10.1972473 12.2263172 10.8449119 12.6463469 12.6440301 8.7290983 11.3309630 11.0764491 11.3006404 11.1031191 4.9477410 12.2911712 11.1917060 -1.2222962 10.4333445 9.0304790 2.8652854 6.0906968 10.6661764 9.7876422 9.6741462 9.9464858 4.3627785 10.0672563 13.3593674 13.4686847 10.3179418 9.7536617 0.6415800 1.2941000 1.2962000 -0.0138150 -0.0138150 -0.0286280 0.3178700 -0.3286700 -0.3286700 0.3161000 0.3161000 0.3113500 -0.0129890 -0.0190180 0.2407800 0.2407800 0.2407800 -0.0151910 -0.0151910 -0.3595400 -0.0035455 -0.3472100 0.1266800 0.1266800 0.1266800 0.0055529 0.0055529 0.0055529 -0.0008316 0.0000000 -0.0088526 0.0033299 -0.0138150 -0.0286280 -0.0286280 0.3178700 0.3178700 -0.3286700 -0.3286700 -0.3286700 0.6044900 0.6044900 0.3161000 -0.0532060 -0.0532060 -0.0532060 -0.0532060 -0.0190180 -0.0176660 0.2407800 0.2407800 0.2407800 0.2407800 -0.0151910 -0.0151910 -0.0151910 -0.3595400 0.0037465 -0.3469800 -0.3788700 -0.3631800 0.1266800 0.2856400 0.0055529 0.0055529 -0.0011726 -0.3489300 0.0058309 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.236 0.127 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.236 0.127 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 0.000 9.0469404 13.2659676 8.6619843 10.1092906 3.8417518 9.9458590 -0.2221280 -0.2221280 8.9969821 8.3227781 0.3627785 8.5406942 3.4782470 9.8398598 9.1452283 2.0997328 9.2082663 9.2166055 11.2828809 8.6907031 9.3484378 7.4643146 10.6205569 4.2372425 9.0352016 10.1353657 3.9872663 NA 10.6711152 4.2040781 13.6921054 11.9365812 7.5787138 10.0707104 7.9427203 8.8586313 3.8222101 -1.2222962 0.3627785 8.8876444 8.6264366 9.6892057 10.4311066 5.8439035 7.5912418 7.3324027 10.0162184 6.1087314 9.2155658 0.3627785 11.5281019 4.7778142 3.9070926 10.1398287 5.8870695 4.7320086 10.5575330 8.8043372 7.6450928 NA 14.0552464 -0.2221280 10.2979412 -1.2222962 8.9389456 4.7550959 7.9402049 8.3130889 13.181145 5.135367 8.322778 12.648082 9.974416 11.135641 12.892044 12.340175 9.338146 10.695932 13.721382 11.234425 9.104243 9.225930 1.947741 6.849276 11.632682 11.033727 7.830381 9.046940 8.827662 8.425272 9.998259 7.216605 5.635795 11.429314 7.907097 4.063218 8.666557 6.600289 11.472824 10.710398 7.843903 8.086153 13.025370 5.927560 11.303056 10.154482 10.649334 9.950241 11.231599 9.806410 10.686957 9.129857 1.585155 9.421210 6.702626 11.534787 7.734916 10.171354 10.197247 7.396420 14.577728 10.051609 10.831061 13.122942 10.285113 9.505734 1.362778 TCGA-BH-A0DQ 42 0 NA 98 breast stage iib t2 n1 m0 female 2009 NA NA infiltrating ductal carcinoma 1 white NA 8 2 1 3 NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 10.878598 9.934796 11.798933 9.047722 8.334695 8.824030 9.829872 10.111998 10.173532 14.113362 10.325075 11.073668 0.293959 12.090529 3.708982 9.819469 5.674771 8.431793 7.126839 12.415266 0.293959 13.546072 3.615875 10.054851 10.534342 6.541876 1.516318 8.611361 10.052727 2.878902 7.725794 7.876404 NA 5.232549 9.593920 9.668988 10.604561 10.556435 9.572398 10.880163 10.558782 11.033448 14.972475 7.593676 9.752013 11.716539 10.671159 5.338342 5.898811 9.166367 12.540590 NA 11.440941 7.147778 5.101301 4.686265 9.985110 11.941707 10.499742 12.279909 12.522166 8.769682 10.724052 9.727186 11.441365 10.977235 4.323694 11.808169 11.698913 1.293959 10.593538 8.895100 2.412754 4.975772 10.884224 9.045492 9.844054 9.799098 3.352843 8.872635 12.914626 11.496684 10.023003 9.699799 0.01373200 0.01373200 0.61063000 -0.00425820 0.62812000 0.01880300 0.01223700 0.60539000 -0.04807200 0.01463700 0.01463700 0.36374000 -0.00287810 -0.00180140 -0.00050297 -0.00050297 -0.00050297 -0.65529000 0.61286000 -0.63472000 0.01265500 -0.00912860 -0.01092200 -0.01092200 -0.01092200 -0.12356000 -0.12356000 -0.12356000 0.65332000 -0.02151000 0.01373200 -0.01697900 0.00364820 0.01283700 0.01734800 0.01223700 0.04315700 0.60539000 -0.63906000 -0.04807200 -0.00883080 -0.00156040 0.01463700 -0.47268000 -0.47922000 0.45272000 0.45051000 -0.00180140 -0.00180140 -0.00050297 -0.00050297 -0.66420000 -0.66420000 -0.65529000 0.61286000 0.61286000 -0.63472000 -0.02720100 -0.00912860 -0.01011200 -0.01092200 -0.01092200 -0.65015000 -0.12356000 -0.12356000 0.64268000 0.01181800 -0.70854000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.479 -0.029 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.479 -0.029 0.000 0.000 8.8240295 14.6699833 6.6976710 10.4948470 4.6631795 11.5998202 1.5163178 1.0309010 8.3989839 9.0851112 -0.2910624 8.8738928 4.1013055 10.5587819 9.0731205 2.7964524 9.3107566 8.9966983 7.7341257 10.3729887 9.5416306 7.6308270 12.0829385 1.8464733 8.4317934 9.5259696 4.4903455 4.2939516 10.7434410 3.8382660 12.1154567 12.1680332 8.9990047 9.5739457 9.3005081 9.2452330 2.8789019 -0.2910624 1.7089818 3.4094317 8.7871366 9.8801627 10.0297865 6.5607348 8.8046993 6.7033388 10.2043413 5.6397242 9.3510375 NA 10.1061257 2.2939590 4.4903455 9.7696075 6.2021199 3.9569116 9.9226977 8.8789108 8.1684174 NA 13.7252284 0.2939590 10.8760904 NA 7.4470783 5.8789117 8.6646357 8.9366017 13.006189 5.012765 8.376098 12.090529 9.621127 10.791800 12.415266 12.033729 9.155035 10.215293 12.890060 9.368090 9.166367 8.562295 1.708982 7.648565 11.458017 11.351940 6.639723 9.170465 8.952160 8.753380 10.744032 6.263575 8.745160 10.325075 7.147778 3.615875 6.331037 7.013269 11.024985 10.057714 9.042141 9.129999 11.668263 5.168417 11.802644 10.604561 10.457598 9.728577 10.338798 10.363622 10.741720 8.697671 NA 9.034752 5.503403 11.440941 8.079673 10.082395 9.985110 7.660270 13.471005 10.566967 10.069833 12.244626 10.525970 9.437757 1.293959 TCGA-BH-A0DS 71 0 NA 78 breast stage iiia t2 n2a m0 female 2010 NA NA infiltrating ductal carcinoma 8 white NA 6 2 5 2 2 2 1 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 10.4819495 9.4688142 11.3602439 8.1773513 8.6962248 9.0446250 9.5337942 9.5788678 10.4707678 11.9280681 10.9139580 10.1981356 6.6760473 12.9276236 4.6417772 10.1904507 7.9300217 8.1162629 10.1030989 13.2343058 1.7486759 14.1721832 4.6417772 10.0470231 11.1653389 9.1845112 0.9413317 8.9328590 9.9027869 2.4007565 8.2922765 6.1797419 0.5262692 4.8955353 9.5178215 10.2010804 10.4291772 10.3744009 9.5384586 11.0475729 5.2811864 9.8101597 14.6618219 5.6780775 9.7527038 11.2261613 10.6022244 3.4007702 6.2632654 8.7773875 11.8652217 NA 11.2942082 6.0498616 6.0287990 5.8239811 10.2789591 11.3920329 11.0651352 12.7472825 12.4487602 7.9637047 11.5479737 11.0218749 11.1308529 10.4411830 2.6417772 12.2946218 10.5919402 NA 10.3539070 9.4431744 3.1930620 5.2451191 10.1773514 9.9164686 9.5234792 10.8455954 3.8482273 10.6819612 12.9230828 11.3899697 9.6031152 9.8459717 -0.0657780 1.4328000 1.3275000 0.3624800 0.3603100 -0.0951690 0.2452900 -0.0748110 -0.5539700 1.6685000 1.6685000 2.6954000 0.5524800 0.3821500 -0.0703020 -0.0710710 -0.0710710 -0.0406650 -0.0691580 -0.0833330 0.5420700 0.4510500 -0.0200010 -0.0200010 -0.0200010 0.0129340 0.0129340 0.0129340 -0.0402090 0.0000000 -0.0657780 -0.0058140 0.3603100 -0.0579240 -0.1013200 0.2452900 0.2452900 -0.0748110 -0.5539700 -0.0866510 0.7501300 0.6732600 0.5329200 -0.0712050 -0.0712050 -0.0712050 0.0146090 0.3821500 0.3821500 -0.0703020 -0.0710710 -0.0710710 -0.0710710 -0.0313590 -0.0691580 -0.0691580 -0.0833330 0.5420700 0.4492400 -0.7072900 -0.0200010 -0.0200010 0.5410100 0.0129340 0.0129340 -0.0603450 0.2061000 -0.0029091 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 0.216 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 0.216 8.79308628 13.43143591 6.51119286 9.32612092 4.33365271 10.57478650 1.94133171 -1.05859316 8.89116397 8.02348602 NA 8.42632095 2.74869737 10.44267680 9.00877147 0.52626917 7.92433093 9.31528975 10.22558295 10.70247280 8.79645467 6.52629891 11.01011545 2.39022744 9.66840672 9.49784326 3.58519091 NA 10.73372082 3.26325981 13.17921931 11.82646153 7.91575153 10.11000925 8.07832803 8.98709685 2.84823734 2.26327483 -0.05859316 11.05638078 8.21746145 9.83160145 10.01145804 6.29888922 8.09072854 7.74546795 10.34754220 8.50929323 9.49015914 0.94133171 10.19636569 1.74867590 3.98572811 10.31261832 7.07108367 5.95256421 9.80552334 8.28118728 8.63133496 4.15078711 13.91749849 1.26327483 9.85870931 NA 7.84822794 6.44913213 7.77105957 8.88824339 12.033230 5.298889 8.638305 12.927624 9.916469 11.171057 13.234306 11.689740 9.122489 10.225583 13.648535 9.162924 8.777387 9.796984 NA 6.860201 11.433941 10.522067 6.991186 9.196354 9.060278 6.918618 9.973996 6.511193 7.648696 10.913958 6.872074 2.400757 6.533794 4.902267 11.571832 10.170156 8.484369 9.215133 9.762314 6.342217 10.021682 10.429177 10.951166 9.807070 10.707866 9.642644 10.306566 8.305472 NA 9.036734 7.028800 11.294208 7.371790 9.915035 10.278959 7.126213 14.078609 10.319090 10.572514 12.475275 10.234234 9.326121 2.748697 TCGA-BH-A0DT 41 0 NA 1170 breast stage iia t1c n1a m0 female 2007 NA NA infiltrating ductal carcinoma 1 white NA 5 2 2 NA 3 1 3 4 2 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 6.935946e-08 11.0799371 9.7774774 11.9188502 9.4905836 8.2431411 9.2884841 10.0861134 9.6909684 10.1877362 12.6151359 11.1704006 10.4250945 3.4376272 13.1417163 4.5129158 10.0247352 9.1469573 8.5401656 10.0602023 12.7781929 5.5250917 14.5001073 6.5006380 9.6534862 10.6132661 4.6746640 0.2152437 9.6168256 9.2255299 1.9521844 8.6732999 8.1963267 -1.3695945 3.8781956 9.9993246 10.3137058 10.1601910 11.0732160 10.2175813 11.5768133 9.3281090 12.1314877 14.8382401 8.5691022 9.4843539 11.4518472 11.3341761 4.8001958 4.6963611 9.1557932 11.6712471 -1.3695945 11.2668971 5.4116330 6.1060070 5.0897058 10.5465252 11.8632929 10.6946784 12.9868620 13.0213818 8.3097528 11.4820215 11.1591880 11.3556388 11.2313468 4.4882515 11.7939222 11.4915533 0.9521844 10.3926545 9.2114732 3.0232731 5.6302715 11.3795134 10.3805607 10.1815002 10.0533885 3.3851549 9.9861741 13.4278834 12.7257519 10.1034709 10.0263421 0.00360760 0.93142000 0.93244000 -0.00512270 -0.00512270 -0.00981850 -0.00981850 -0.00912860 -0.00912860 0.41195000 0.41195000 0.40577000 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00277070 0.01530800 -0.00705760 -0.00788630 -0.00420200 0.00291490 0.01223700 0.01223700 0.01223700 0.01838300 0.01838300 0.01838300 0.01181800 0.00360760 0.00360760 -0.00091903 -0.00512270 -0.00981850 -0.01106000 -0.00981850 -0.00981850 -0.00912860 -0.00912860 -0.00912860 0.40911000 0.40681000 0.41195000 0.00138680 0.00138680 0.00138680 0.00138680 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00277070 -0.00277070 -0.00378510 -0.00332260 -0.00332260 -0.00788630 -0.00420200 0.00624810 -0.56992000 0.01223700 0.01223700 0.41396000 0.01838300 0.01838300 0.00087288 -0.00828380 -0.09723200 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 0.000 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 0.000 9.4408440 13.0880381 7.7646991 9.7420603 3.8397279 10.7958076 2.8002062 0.6303123 8.7164086 9.2403747 -0.3697809 8.1660727 3.4376272 10.1449865 9.3734240 0.2152437 9.5129156 9.2678031 9.8317838 9.7762047 9.5692860 7.0855999 11.0871403 3.4376272 10.0886791 9.9740134 8.6061205 NA 10.2709693 3.3851549 13.0835431 12.0765804 8.3220160 10.5033320 8.0897042 9.0290161 3.7177367 1.4376539 -0.3697809 5.6963611 8.2486582 9.1645754 9.9040681 5.4376272 7.5983920 6.0396626 10.3976294 7.0814834 9.4686886 -0.3697809 10.3988704 2.4376272 4.6302715 10.2688849 6.5798077 5.0732161 9.3598932 7.7543938 6.7800200 NA 13.9261132 -0.3697809 9.9369039 NA 9.4017621 5.6414998 7.9202915 8.5683818 12.788942 5.073216 8.970123 13.141716 10.381817 10.887955 12.778193 12.346770 9.259128 10.867482 13.469427 11.572420 9.155793 8.759556 -1.369595 7.488254 11.641325 11.266217 6.873447 9.254154 9.414089 8.188693 10.655644 6.431172 8.118113 11.170401 5.849441 4.934054 8.071142 5.815645 12.336553 10.409992 8.577179 7.949945 12.088166 6.089704 10.205268 10.160191 10.484751 9.984522 11.128623 10.092263 10.729620 9.275931 NA 9.411780 6.911043 11.266897 7.005312 10.899814 10.546525 7.005312 14.241441 10.011815 10.413271 13.276719 10.897937 9.840944 2.330702 TCGA-BH-A0DV 54 0 NA 2064 breast stage iiia t2 n2a m0 female 2007 NA yes infiltrating ductal carcinoma 9 white NA NA NA 2 4 2 4 3 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 9.5857047 9.7582349 11.7801297 9.4106720 8.4075146 8.7088121 9.7973611 9.7246298 11.0579810 12.9835989 10.9187648 10.5815080 2.3388808 12.8232433 2.9518675 10.3302494 7.4584460 8.2598600 9.3148266 12.1376996 -0.1635911 12.9734384 6.0716104 9.8012161 9.6602919 6.3755521 NA 9.7759732 8.3026403 4.2514313 8.7944633 7.8844264 -0.7485536 6.5040976 9.6232081 10.0953524 9.7062448 10.4952005 9.9096429 11.1101895 11.0730061 9.3768449 15.5503353 7.9639584 10.0216824 11.3914623 10.8943856 6.3858572 5.2401158 9.2978735 11.3941767 NA 11.3911427 6.7067585 5.3909840 4.8807884 10.3077304 11.4746790 10.6894435 11.9887844 12.5110276 9.0154736 11.0855074 10.6846308 10.9381508 11.2313924 4.9238575 11.4461883 10.6727073 -1.7485536 10.5132325 8.6416002 2.4205632 5.3388950 10.6729703 9.8734832 9.9987853 9.1109661 5.2401158 9.7026425 13.8418138 13.3829669 10.0079878 9.7749934 0.17752000 0.17752000 0.48811000 0.00715020 0.01829600 -0.00201110 0.01523600 -0.00034850 -0.00034850 -0.00699050 -0.00699050 -0.00699050 -0.00048710 -0.00048710 -0.00131850 -0.00131850 -0.00131850 -0.00048710 -0.00048710 -0.00118000 0.06155800 -0.00560860 -0.00076428 -0.00076428 -0.00076428 -0.00367230 -0.00864760 -0.00864760 -0.01374800 0.17752000 0.17752000 0.00173170 0.00715020 -0.00201110 0.00000000 0.01523600 0.01523600 -0.00034850 -0.00034850 -0.00034850 0.00993460 0.00993460 -0.00699050 0.00854190 0.00854190 0.00854190 0.00854190 -0.00048710 -0.00048710 -0.00131850 -0.00131850 -0.00131850 -0.00131850 -0.00048710 -0.00048710 -0.00048710 -0.00118000 0.02547800 -0.00560860 -0.22425000 -0.00076428 -0.00076428 0.00979530 -0.00367230 -0.00864760 0.00756760 -0.00781920 -0.00886980 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3422054 13.8818692 6.7271649 10.9200948 3.0989248 10.7587306 0.8364089 1.9518861 8.3507792 9.5523559 NA 9.3656877 4.1583209 9.8789653 8.7681165 1.4213714 11.2424217 9.7552571 11.3816802 9.9703924 9.3658764 6.5957274 12.6360128 3.0063160 8.7139336 10.3534071 6.2514313 NA 10.8982152 3.1583209 13.0017197 12.1157143 9.5552122 10.3897032 8.1432153 9.1762440 3.3807156 0.5733745 NA 6.7710682 8.7005802 9.5035056 9.7422823 7.3121269 6.9555081 5.4802490 10.2415354 6.6264713 9.5912815 -0.7485536 11.5778609 3.4993612 5.2514313 9.6603609 6.2616512 3.7432888 10.3501215 9.8231841 6.9518710 NA 13.7897719 3.1094107 10.5085245 NA 8.2358501 8.2654519 7.5414506 9.3599560 12.135220 2.951868 7.953604 12.823243 10.119482 10.782325 12.137700 11.244724 9.093782 10.554356 14.093610 11.532637 9.297873 10.109801 NA 6.794463 11.232107 11.425109 6.301280 9.069215 8.602371 7.566581 10.088346 6.140175 7.858762 10.918765 6.843888 3.338895 4.359957 5.854390 11.936290 10.497578 8.440020 8.284855 11.833456 5.591281 10.091308 9.706245 10.258108 9.764666 10.858762 10.663472 10.799049 9.281409 NA 9.276848 6.115618 11.391143 8.696446 10.472602 10.307730 6.851344 14.163502 10.017546 10.857837 12.988256 10.166190 9.079568 3.006316 TCGA-BH-A0DX 62 0 NA 2156 breast stage i t1b n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 2 NA NA NA 3 4 4 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 2.774378e-07 9.3651665 9.9711435 11.7130753 8.9271504 8.0936399 9.7699910 10.9865736 10.3078664 10.8204474 15.1030376 10.3610900 10.9825988 2.8219347 11.5871518 1.1589833 10.8714932 5.5397885 8.3925858 11.2368946 12.9189237 NA 13.6619223 3.2178666 9.3871434 10.8510004 10.4420545 2.9663197 11.5900789 10.4797667 2.9663197 8.0436453 7.2464290 NA 5.1887135 9.9321053 10.0936399 9.1495429 11.1769344 10.4347028 10.8760713 3.5281962 10.6939174 15.1080633 8.3630317 10.1542622 10.7644457 10.4532040 4.1589671 5.0817998 8.9960684 11.7486173 -1.4258500 10.9931738 6.5852315 6.5397885 6.9533817 10.3631297 11.7531353 10.3533127 12.5650826 12.7418138 7.4163542 11.0768355 9.9464225 10.9735486 11.2640016 4.1589671 11.4958446 9.6896977 0.1589833 10.4183171 8.8524530 3.1187418 5.7135556 10.4574106 10.0400801 10.0179833 9.2587523 2.4808855 9.9177446 12.5866282 12.0474558 9.4005522 9.6286079 -0.34377000 1.78530000 0.29596000 0.02841700 0.03397200 0.00235810 0.00180300 -0.00843850 -0.00691950 -0.00097017 -0.00097017 -0.00097017 0.00000000 -0.00318590 -0.00318590 0.00124810 0.00124810 -0.00526100 0.19756000 0.01782400 -0.00124730 0.00180300 0.01056400 -0.35988000 -0.00152430 -0.00609040 0.00041593 0.00041593 0.02539000 0.00013863 -0.34377000 -0.01642900 0.02841700 -0.36397000 0.00235810 0.00180300 0.01782400 -0.00843850 -0.35099000 0.54824000 -0.00207840 -0.35282000 -0.00097017 0.00305220 0.00305220 -0.00354460 0.00132580 -0.00318590 -0.00318590 -0.00207840 0.00124810 -0.01285100 -0.01285100 -0.00526100 -0.35931000 -0.35931000 0.01782400 -0.00124730 -0.35109000 -0.01828200 -0.36386000 -0.35988000 0.01167900 -0.00609040 0.00041593 0.02539000 0.00013863 0.00183250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.339 0.000 -0.362 0.000 -0.372 0.000 0.000 0.000 0.000 0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 -0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.339 0.000 -0.362 0.000 -0.372 0.000 0.000 0.000 0.000 0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 -0.201 8.6481451 13.6879086 4.6400945 10.2060901 3.1589671 11.3627220 1.8959230 0.5739561 7.8959315 8.1850285 NA 7.8599838 4.7834567 10.6008729 9.3917868 3.5281962 9.3347236 9.0446627 9.2848102 11.5309243 9.5032104 7.8754999 11.2871754 2.5740046 8.9555468 10.4021402 6.2605037 -0.4260439 10.5441096 2.1589509 12.9398477 12.6011322 8.5991433 9.3869831 8.2033602 9.7199358 4.6400945 3.5281962 0.5739561 3.2744406 8.4718491 9.2384511 9.8022212 6.0086325 8.4268451 6.3877847 9.4898831 5.0334362 9.6394198 0.1589833 12.1097650 3.1589671 3.7439242 9.1605338 7.2976307 3.7032890 9.0837787 9.2223612 5.9833950 2.3813664 13.7418530 0.1589833 11.0213452 NA 7.2640015 6.3749038 8.1495429 9.0107152 12.774672 6.450520 8.513583 11.587152 10.033435 11.293606 12.918924 12.421550 9.302775 10.323756 14.179773 10.478262 8.996068 8.943601 1.574005 7.105385 11.435284 11.528018 6.057818 8.665439 8.107333 7.554143 10.874205 5.723750 9.423409 10.361090 6.817178 1.574005 4.355362 7.326785 10.791053 10.787108 8.568357 9.088718 10.946597 5.640092 11.488912 9.149543 10.381761 9.808821 11.884616 10.330143 10.670389 8.977016 0.895923 9.667685 5.049735 10.993174 8.644125 10.872891 10.363130 6.634699 13.080869 10.902679 10.976749 12.487454 10.792870 9.606049 3.033441 TCGA-BH-A0DZ 43 0 NA 495 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 1 white NA 1 3 1 NA NA NA 2 2 4 1 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.860874e-06 2.774378e-06 9.4122648 9.5310510 10.8056073 8.5781968 7.0921303 8.9311382 8.2247373 9.6681037 11.0837047 13.3541373 10.7190407 10.4309841 NA 15.3336173 1.7612002 9.6830541 4.2206473 8.3869221 8.8001321 12.3912527 NA 12.8785316 1.7612002 9.1620927 10.3518002 8.7124978 0.7612002 12.4793179 10.1535306 -0.2387147 7.9210846 7.0186008 1.3461910 4.9311393 9.4976152 10.5194363 9.3138823 11.8998049 9.5293976 10.2010440 7.9559701 10.1758984 15.1368975 7.0602377 8.7835811 10.1780107 9.9298852 4.2206473 3.2206395 8.7269974 10.9058714 NA 11.2610590 4.9706650 5.8273033 5.1535297 10.4967692 11.7636766 9.8406980 12.2945429 12.5446207 7.9900319 11.2570682 10.2690078 11.5110826 10.9510377 4.9706650 11.4997277 11.2615571 2.0831453 10.1132565 9.1121522 0.7612002 5.0466133 10.5119201 9.6145227 8.7891192 10.3186768 NA 9.8232593 12.7447412 11.5633256 9.2144838 9.2103618 0.65240000 0.02152900 0.00374650 0.01335300 -0.00221680 -0.05738500 0.00416320 -0.00304750 1.77320000 -0.00138580 -0.00138580 0.63573000 0.00527490 0.00527490 3.65690000 2.92530000 -0.64076000 0.03312700 0.00000000 -0.00885260 0.02553100 0.01698500 -0.00124730 3.65690000 1.95970000 0.00000000 0.00000000 0.00000000 0.02076300 -0.02630400 -0.64884000 -0.00857660 -0.64528000 0.00069327 -0.05738500 0.00416320 0.00416320 -0.00304750 -0.00304750 0.03891300 -0.37302000 -0.37696000 -0.00138580 0.00513590 0.00513590 0.00513590 0.00513590 0.00527490 0.00527490 -0.64728000 0.00027728 -0.64076000 -0.63632000 -0.64471000 0.00000000 0.00000000 -0.00885260 0.02553100 0.01880300 -0.64781000 -0.63547000 -0.62751000 -0.00401620 0.00000000 0.00000000 0.02076300 -0.00249380 0.02876300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.585 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.585 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 0.000 8.8110616 14.7704732 5.8697382 9.7583926 NA 10.4564414 NA -0.2387147 8.0558339 9.6605700 NA 8.7808038 2.5685672 10.9639492 8.2886903 1.7612002 6.2369460 9.1706041 9.6407964 9.4014581 9.3003720 6.9411227 11.1021759 NA 4.9706650 10.2590649 5.2530665 NA 11.7762797 0.7612002 12.8192049 12.4149539 8.5127571 10.4336384 8.2610592 9.4771752 4.9311393 3.0831453 NA 6.2847751 7.9559701 9.8866267 10.5829871 5.4616530 7.9699839 5.6919501 9.9398780 6.2530665 8.9852149 NA 10.1088345 3.0831453 2.3461627 9.3889293 4.5788361 4.6681021 9.5392903 8.5588745 9.5474828 0.7612002 14.0353000 NA 10.3629840 NA 8.4720194 3.5685672 8.1492304 8.9084181 12.9662931 5.9311370 8.0921303 15.3336173 10.0808852 10.3395858 12.3912527 10.8326755 8.1874778 10.5384684 13.4264380 10.3914802 8.7269974 8.7470550 -0.2387147 8.5621130 11.0971617 11.200005 3.461646 9.696378 8.688991 7.412265 10.198653 5.910960 6.880154 10.719041 6.064995 3.761211 5.910960 6.225718 11.659437 9.794636 6.859245 9.490834 10.233904 5.405070 11.365266 9.313882 10.542573 9.545848 10.568568 9.181173 10.252064 8.738493 NA 8.224247 5.869738 11.261059 8.311960 10.554003 10.496769 7.755567 13.700976 10.830663 10.125348 11.822922 10.388747 8.157818 1.346191 TCGA-BH-A0E0 38 0 NA 134 breast stage iiic t3 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 10 white NA 4 4 4 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 9.8964496 8.7852707 11.7011665 8.5333523 8.3568872 7.4899956 11.1155438 9.6174612 9.5416335 13.4236166 10.6039676 10.1588689 4.8400150 12.0647337 2.2854318 7.3133311 6.6604638 8.2337922 7.4147081 7.7032772 1.6073422 12.4319934 8.9543097 10.0910478 10.0082322 6.1680683 0.8704239 8.7116897 11.6924269 3.9858647 9.2755288 6.6073525 10.0302585 4.0403138 9.7356049 10.7397241 9.6208151 8.8070251 9.1056037 11.2013041 3.7448607 9.1877999 14.0599030 7.4251806 8.7428056 10.7586231 9.9516487 2.6073422 2.0927825 8.9184199 9.0943889 NA 11.2334269 2.6073422 5.5522111 4.6777394 8.0201343 11.7540488 10.0585640 10.3008399 12.2612727 5.5333515 11.7463925 10.1680678 9.9953702 10.9498721 3.9858647 11.3434165 7.2220626 NA 10.9265734 9.0031013 4.8853352 3.4553469 11.5363153 10.8438455 9.9578500 8.9789118 1.6073422 7.9789118 11.6208151 12.0550560 10.2468744 10.0903624 1.2061000 2.2422000 0.0000000 -0.4160800 0.0140510 -0.4230900 -0.4512500 0.0160060 0.0160060 0.0015255 0.0015255 0.4222100 0.3450200 0.0308730 0.0102850 0.0102850 1.5477000 0.4233500 -0.4191500 0.4059400 -0.4216600 -0.4481900 -0.3978600 -0.3978600 -0.3978600 -0.3785300 -0.0167040 0.4247600 0.4314200 0.0683780 0.0133530 -0.4233500 -0.4182100 -0.4438000 -0.4230900 -0.4360900 -0.4249500 0.0160060 0.0160060 0.0155870 0.4334400 0.4312500 0.0015255 0.4071100 0.0083351 0.0083351 -0.4061700 0.0308730 0.4278600 0.0607940 0.0102850 -0.4350800 -0.4350800 0.4233500 -0.4149800 -0.4149800 -0.4257100 -0.4216600 -0.4186000 -0.3882800 -0.3978600 -0.3978600 0.4132900 -0.3785300 0.4523200 0.4007700 -0.0008316 -0.4078200 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 0.000 7.9472027 11.2061498 7.1557897 7.5285987 4.7330018 10.3008399 1.2854022 8.1309149 9.5214389 8.5142434 -0.7145386 5.4948796 9.5486940 10.9662238 8.5731370 1.8703844 6.2741088 9.6451744 10.5742909 10.3447693 9.0624334 6.5238301 10.9823923 0.8704239 6.9292809 9.5094265 3.7448607 0.8704239 9.8732023 1.2854022 14.2053123 12.8244624 7.8400137 10.0749584 5.9436354 10.5380902 1.6073422 3.2854318 1.6073422 NA 9.5321654 10.2272061 5.8853376 3.3728825 8.9888267 9.6396741 10.1379543 5.6948161 9.1434057 2.4553601 9.6820295 2.2854318 3.0927825 10.3267554 5.8841461 3.2854318 7.7932196 6.7448567 4.9578496 11.9371492 14.4776790 0.8704239 10.9038102 NA 12.1853481 4.0403138 9.6506536 7.3781821 9.9424752 10.1087921 8.0798405 12.0647337 10.4377096 11.4319934 7.7032772 8.1680678 10.4598262 11.0315191 13.7386311 10.5748674 8.9184199 7.9684191 -0.7145386 7.0268919 11.5277057 10.440875 5.761158 8.684169 10.059388 8.305016 9.467732 4.677739 6.372888 10.603968 9.744856 1.607342 6.862853 7.638086 10.940061 10.133265 8.598308 10.235251 7.664803 6.227939 10.894276 9.620815 9.742806 10.478334 11.038224 10.820700 10.748438 8.210237 NA 8.845299 7.450332 11.233427 4.040314 10.349494 8.020134 8.143406 15.038850 10.664803 11.671287 11.478950 10.729922 9.317471 2.455360 TCGA-BH-A0E1 52 0 NA 477 breast stage iib t2 n1 m0 female 2009 NA no infiltrating ductal carcinoma 2 white NA 5 2 2 3 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.467973e-07 10.436453 9.459354 11.676113 9.397177 8.611681 8.913612 10.308972 9.645594 9.826964 12.772736 11.155167 10.460570 1.663299 12.242158 3.186881 9.635576 7.579193 7.978463 10.688453 13.138921 3.570208 13.584318 6.533679 10.174928 10.410668 6.685682 -1.336792 7.483493 11.163409 NA 7.473885 6.892132 -1.336792 4.617510 9.407307 10.713843 12.030046 10.942344 9.631981 10.769550 8.562671 10.598479 14.566231 8.107894 9.426526 11.517987 11.340593 3.055630 6.558131 8.730748 11.338609 1.663299 11.382703 5.418200 6.971653 4.663316 10.358977 11.854836 10.453662 13.033388 12.765618 9.192744 10.873072 10.489823 11.165648 10.935652 4.155166 11.315487 11.011212 2.122739 10.204894 9.031820 1.248292 4.248277 10.691220 10.816549 9.998704 9.010935 1.833254 7.325092 11.885505 11.920112 9.692601 9.166146 -0.00902160 1.36140000 1.36970000 0.00033257 -0.01527800 -0.01749800 -0.00816270 -0.00194010 -0.01994000 0.30194000 0.30194000 0.30377000 0.00472380 0.01349700 0.00339740 0.00501170 0.00501170 -0.02315500 -0.02315500 -0.01009500 0.00277430 0.02174300 0.02020200 0.00522040 0.00522040 0.00319080 0.00319080 -0.00094318 0.07527100 0.02020200 -0.00902160 -0.00968080 0.00777810 0.01726400 -0.01749800 -0.00816270 -0.00816270 -0.00194010 -0.01994000 -0.01994000 -0.01262300 -0.00830070 0.30194000 0.00332500 0.00332500 0.00332500 0.03101300 0.01349700 0.01349700 0.00339740 0.00501170 0.00000000 0.02146300 -0.02315500 0.00541360 0.00541360 -0.01009500 0.00277430 0.02174300 -0.74942000 0.02020200 0.00522040 0.01516800 0.00319080 -0.00094318 -0.75323000 0.01112100 0.02581100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.341 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.341 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 7.1868759 12.6071107 4.4962067 9.5858983 NA 10.1466258 0.9852089 -1.3367920 8.6994874 8.6463074 1.2482919 7.2369613 2.3637598 10.5166234 9.1062572 2.2482616 6.6633133 8.9886194 12.0138387 11.4818960 9.7795864 6.9716528 11.1888347 0.2482919 9.1000255 10.0192156 4.6633162 NA 10.4273561 1.9852454 13.3705651 12.4165306 8.8382396 10.0801113 8.6087579 9.1770415 2.4706670 2.7507780 0.2482919 6.6519988 8.9100544 11.7012040 9.4323252 3.5702079 8.0144295 7.8054208 10.4323252 5.6967367 9.8945351 0.2482919 12.4605701 1.2482919 8.5762031 9.4522198 6.3878278 1.9852454 9.0769417 7.3878278 7.3357396 NA 14.0440455 -0.3366098 10.1666428 NA 8.2687932 6.7294032 7.9716528 9.1790136 14.525472 6.240742 8.298125 12.242158 10.294946 11.770040 13.138921 12.884901 9.236014 10.437277 13.660670 10.790986 8.730748 10.090103 -1.336792 7.530593 11.816391 10.775102 5.278022 8.836991 8.831986 9.473516 9.921032 4.089574 8.449584 11.155167 4.640592 8.229368 8.634858 7.060732 10.297217 9.674541 8.502518 8.780957 12.880741 2.570196 9.071888 12.030046 10.199561 10.078528 11.625125 9.845087 10.723334 9.286281 NA 9.241951 4.217905 11.382703 6.838240 10.376700 10.358977 7.029636 14.205560 10.609123 10.138034 12.718512 10.066859 9.349814 2.363760 TCGA-BH-A0E2 49 0 NA 435 breast stage iiia t2 n2a m0 female 2009 NA no infiltrating ductal carcinoma 4 black or african american NA 3 1 1 1 1 5 1 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.080784e-07 9.2365361 9.7234372 10.4184053 8.2763436 8.8416939 8.4579898 10.9168356 10.4364959 10.5332777 13.9830210 11.1586771 10.7331164 5.9174222 11.7526104 4.0769011 8.8600882 5.9904852 8.1039051 10.5709876 12.7840981 -0.3494192 14.7398783 2.2356045 9.2223873 11.8105060 7.8527586 2.4579882 8.2836301 10.9632341 0.6506727 7.9949304 7.8746365 3.2356045 4.0081910 9.1781118 10.5575254 9.4179915 10.7190771 9.9910412 11.0021261 10.4426115 11.5968099 15.1000413 8.0894060 11.8021254 10.8500004 10.3239438 3.4055159 5.9267585 8.8330292 10.5450735 0.2356045 11.4179916 5.0769011 5.1100667 3.8985663 11.0873463 11.9819716 10.2355972 11.9053681 12.1721125 8.1039051 11.4801593 10.7117359 10.5454525 10.2337175 4.8003822 12.4145732 11.0972011 NA 10.4150917 9.0289296 3.1015156 4.6048304 11.1230717 11.7376002 10.5252319 9.9663504 4.5575265 9.5279189 12.3592876 11.0876064 10.1761556 9.1008150 0.0981240 0.0577960 0.0561650 0.6810500 -0.0362650 -0.0103600 0.0363700 -0.1326400 -0.2673300 3.1931000 0.0315770 0.9397600 0.0056919 -0.0175290 0.0189100 0.0943460 -0.7641500 0.0351000 2.8216000 1.3825000 -0.0062286 0.0080567 -0.7221700 -0.7066600 0.2764700 0.0024969 0.0024969 -0.1848400 0.1185800 -0.6466800 -0.6985700 -0.6373600 -0.0030475 0.0172640 -0.0167970 -0.0259650 -0.0259650 -0.1326400 -0.2974900 0.1999900 0.0134920 -0.1321400 -0.7384500 -0.1111600 -0.0230470 -0.0230470 0.0911550 0.0012481 0.0176840 0.0189100 -0.6252200 -0.8015700 -0.7713600 0.0351000 -0.5179400 -0.4705600 0.6654900 -0.6907900 0.0080567 -0.6319700 -0.7447000 -0.7066600 0.0642250 0.0024969 0.0024969 0.1122800 -0.1208200 0.1478600 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.694 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.694 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 0.000 8.3717340 13.7352770 5.7591585 9.8142844 NA 10.6881817 0.6506727 0.6506727 8.5843255 7.4482964 NA 8.2564474 1.6506267 10.1989750 8.9759402 1.4580145 8.6464017 9.4229492 7.5694979 11.2214392 9.2060962 7.6364767 10.9924315 1.4580145 7.9009332 10.2162128 5.6506353 2.8205670 11.1744417 2.9725640 12.7093030 12.0043329 7.9080227 10.4704146 8.3545381 9.5109457 1.6506267 4.2355969 NA 10.1459901 9.0579024 9.7420701 10.9921536 2.7380977 8.9936316 6.7591598 10.2133542 5.7059171 9.9109663 NA 10.1268747 2.8205670 4.8003822 10.5337209 6.8823838 4.6048304 9.8041867 8.3423783 8.4740020 5.7695761 13.7009511 -0.3494192 10.5586520 0.2356045 7.6307746 5.7274495 8.2052234 10.2360668 13.9940287 6.2872599 8.7669787 11.7526104 10.9931428 10.2836299 12.7840981 13.2465332 8.3141930 10.8045033 13.0553106 11.2440258 8.8330292 8.5408991 0.2356045 7.8429273 11.4474855 11.204504 5.378557 8.670225 8.820560 7.837987 10.831809 6.323060 8.478771 11.158677 8.659063 4.174199 6.903300 6.889183 11.230893 10.260737 8.116201 9.477183 10.425010 5.392101 10.642723 9.417992 10.850920 9.533278 11.643927 9.649225 10.496517 9.004884 1.235605 8.706351 5.695028 11.417992 7.305271 10.667231 11.087346 6.514821 13.457587 10.001022 9.979310 11.962809 10.592049 9.113137 1.235605 TCGA-BH-A0E6 69 0 NA 293 breast stage ia t1c n0 (i-) m0 female 2009 NA NA infiltrating ductal carcinoma 0 white NA 4 4 4 NA 2 4 2 5 1 6 NA NA 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.109751e-06 2.774378e-07 8.69029172 7.56060033 10.31284054 6.83312665 8.62348831 7.82720168 8.42790991 10.00960625 11.06792436 12.38166423 9.63200987 9.98719763 2.48735772 12.42925519 2.36182449 9.97987258 7.70005055 8.42986615 10.09283126 7.71617057 -1.09757906 11.57282417 8.18083858 10.46892375 10.00305151 4.90238717 1.22428729 8.97920481 12.16272071 4.03166868 7.70974416 7.55702556 7.80325610 6.14079297 6.73527981 9.34947232 9.60629287 8.32655532 8.34533250 10.39974212 4.15031596 7.72893747 14.50867874 6.94300822 9.00567704 10.63879111 9.99514628 4.60283097 6.18779150 8.97251001 9.69842877 0.90242094 11.19298409 4.25994283 5.20617043 4.32865698 7.95495702 12.12850030 10.55388940 10.43084328 12.26611331 9.15268768 11.77429443 10.09406541 10.11488558 10.14139102 2.90238235 11.65142057 8.71296095 -0.09757906 10.02780263 8.99250164 3.29470896 4.22431816 8.97116760 9.97385160 10.04257991 8.65894550 5.32865339 7.08229809 11.04545348 12.60996404 10.58976489 9.89461953 0.23654000 0.72754000 0.67511000 0.60467000 0.67196000 -0.31096000 -0.66726000 0.07239600 0.13954000 1.57490000 1.57490000 0.01195800 0.79859000 0.30553000 0.01349200 -0.31343000 0.01378100 -0.33722000 -0.00304750 0.02539000 -0.31143000 0.00073297 -0.12564000 -0.12564000 -0.12564000 0.00680440 -0.01679200 0.33108000 -0.06464300 -0.29508000 0.23654000 -0.10316000 0.00000000 -0.32126000 -0.32165000 -0.32693000 -0.32693000 0.05067700 0.13954000 0.13505000 -0.32112000 0.86951000 -0.32982000 -0.30540000 -0.30540000 -0.30540000 -0.30540000 0.30553000 0.32060000 0.01349200 -0.31343000 0.01618600 0.01618600 -0.32356000 -0.00954260 -0.00954260 -0.62646000 -0.31143000 -0.31061000 -0.31471000 -0.12564000 -0.12564000 0.26483000 -0.31365000 -0.02630400 0.28786000 0.10921000 -0.31014000 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.221 -0.107 0.000 0.000 -0.314 -0.314 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 -0.152 0.305 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.221 -0.107 0.000 0.000 -0.314 -0.314 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 -0.152 0.305 8.8449038 12.7436587 4.4569770 9.4210423 5.7307160 13.3654665 4.5462463 2.2243182 10.3144297 8.5606007 12.1675647 8.5299232 3.2947090 11.0007503 9.3096569 5.6303094 6.2243182 9.8492955 7.1167078 10.4082008 8.4199800 4.9898520 11.8852046 NA 8.6606124 9.5730454 4.1503160 NA 11.1577129 3.7097428 14.4237749 12.9869485 8.0265107 9.6345566 8.5888896 10.7964491 4.6028310 1.7097318 NA 0.9024209 8.1020618 11.0310280 6.9247567 6.3453325 9.7637475 9.7185729 10.0323162 4.9023872 9.3338868 7.2377798 10.2355446 1.7097318 4.9898520 11.6281155 8.3052519 7.7941728 8.8419684 7.1738520 10.9136165 4.4259493 14.2479677 1.7097318 10.3699948 1.9023824 10.4939116 5.2061704 9.2989939 9.0934485 10.338580 8.917804 7.965784 12.429255 10.409688 12.089277 7.716171 10.813781 8.898156 9.477928 12.588014 10.617922 8.972510 9.188947 1.487332 7.378122 9.702480 10.600226 4.989852 9.073566 8.989852 8.206170 9.413104 6.703289 6.609749 9.632010 11.725557 8.425951 9.128801 8.252931 11.053406 9.292558 7.830167 10.100220 6.760370 8.143181 9.658095 9.606293 10.045135 10.303802 11.200165 10.600226 10.297388 7.155055 NA 9.295115 9.156237 11.192984 5.844903 10.578346 7.954957 8.376095 15.282140 10.541278 10.455538 11.588890 11.864924 8.758815 3.072312 TCGA-BH-A0E7 79 0 NA 1363 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white NA 5 5 2 NA 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 5 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 8.669932e-07 3.121176e-07 10.5151118 9.9518274 11.5902749 10.1257521 8.2013864 9.0514189 9.8910464 8.9593523 9.0388463 14.0500492 11.3359383 10.5051494 -0.7971122 12.8586622 3.2902622 9.3249771 4.8321508 8.4400062 9.9631003 13.1697971 2.2902474 13.7901341 7.0638825 9.5134941 11.3943180 5.3525431 -0.7971122 8.2348419 8.8064223 2.3727293 7.0036956 6.5908131 0.2027625 4.9709825 9.9597693 10.2255106 10.4140760 11.8237032 10.1782858 11.9376115 9.1475082 11.5774280 14.6429028 8.2189497 9.6647870 12.2481291 11.2869400 2.4507230 5.6540058 9.2471901 13.1111418 0.2027625 11.7239057 3.9576825 3.5603481 2.8466538 9.8119748 11.6361207 10.1394339 12.4949020 12.8613981 7.4601839 11.3625097 10.7795496 11.6728194 11.1823999 5.1335348 11.8483419 13.1674979 -0.7971122 10.2919155 9.4601839 3.2108875 4.3926197 10.1685804 10.4789205 10.6063407 11.7810508 3.1096949 8.8681321 13.5229620 11.7363692 8.1743395 9.6606900 -0.00462270 -0.00462270 -0.00484610 -0.00041585 -0.01577300 -0.00912860 -0.00664320 -0.01807800 -0.01807800 -0.82089000 2.89970000 1.56350000 0.17400000 0.16124000 0.00000000 0.00000000 0.00000000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00142280 0.02230400 0.02230400 0.02230400 0.02034300 0.02034300 0.02034300 0.01460900 0.03679400 -0.00462270 -0.00363810 -0.00698290 -0.00912860 0.00688420 -0.00664320 -0.00664320 -0.01807800 -0.01807800 -0.01807800 0.00458000 -0.00247670 -0.82089000 -0.00324850 0.01098200 0.01098200 0.01098200 0.16124000 0.16124000 0.00000000 0.00000000 0.00555290 0.00555290 0.14741000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00680440 -0.82123000 0.02230400 0.02230400 0.00217370 0.02034300 0.02034300 0.01460900 0.00263570 0.00069327 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.743 1.564 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.743 1.564 0.000 0.000 0.000 0.000 7.2279355 12.7308838 10.8681320 9.4195418 4.1821361 9.4049199 0.5247658 NA 8.0808468 7.3372223 NA 7.1498782 0.2027625 10.3699006 9.0662079 0.5247658 4.8892983 9.1757758 7.9660082 9.5843391 9.1335777 8.0069269 11.3582468 1.9032311 10.2587563 9.4453748 5.8892959 NA 10.7858788 3.4507230 12.0437706 12.1621641 7.9101552 10.8750004 7.4974168 9.2077187 3.4881936 0.2027625 0.2027625 0.7877668 9.5088578 9.7307617 10.3870515 1.7877668 6.9208840 6.1096865 10.8473283 7.7650387 9.5241605 -1.7973629 9.4771742 3.4122531 5.2580779 9.4493705 5.7897110 -0.7971122 9.5173792 7.9626844 7.0004575 1.9032311 13.5048994 -1.7973629 9.9062671 NA 8.0309325 5.9709802 7.4243830 9.1386978 13.268652 4.662228 8.975935 12.858662 10.138698 10.117181 13.169797 13.140170 9.165692 11.196088 12.220213 7.547092 9.247190 8.027755 -1.797363 7.334653 11.596991 11.001470 7.118675 8.911880 9.834428 8.252645 10.313550 5.332078 7.003696 11.335938 5.202798 -1.797363 3.846654 5.190911 10.334332 10.420754 8.984975 8.473091 13.985538 1.903231 10.263796 10.414076 10.429208 9.667852 12.404001 9.213324 10.599668 9.724887 NA 9.732993 2.524716 11.723906 7.233463 10.271574 9.811975 7.342526 13.366599 10.140905 10.317189 12.768374 10.024171 10.445970 NA TCGA-BH-A0E9 53 0 NA 1405 breast stage iib t2 n1a m0 female 2006 NA NA infiltrating lobular carcinoma 3 white NA 2 2 3 NA 2 2 3 3 2 3 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 10.8079976 10.0190355 11.7237083 10.2104500 8.1160762 9.6377166 10.5258133 9.4943046 10.0380991 11.7370813 11.3603185 10.7071595 1.9608082 13.3171997 3.2562559 9.2974058 7.7373805 8.6862414 11.1970295 12.8779664 3.9932215 13.8905269 8.3992117 8.9355252 10.8885758 6.9107566 -0.4985863 9.2017451 9.4879194 3.4555574 7.7277782 7.8633097 1.3087104 5.0559548 10.9380777 9.9027791 9.8345215 11.0076737 10.3585697 12.0988368 5.4321042 11.2476705 14.7727562 7.9236205 9.3732715 11.3638098 11.4930652 5.9851816 5.1452209 9.6007139 12.7259708 -1.4985863 10.8556156 5.6098909 5.9607966 4.3840083 10.0702723 11.9083683 10.1202105 12.1692539 13.0905491 8.6948917 11.2566710 10.9055923 11.7941192 11.3468562 5.4202297 11.7672742 11.4095711 -1.4985863 10.1874289 9.2044046 3.7462483 6.2562540 10.5233871 9.7757443 10.0121303 9.7710772 5.0405243 10.7214421 14.3104309 12.9696720 10.0511509 9.6631279 -0.276910 0.777720 0.777720 0.165950 0.164850 -0.264020 -0.070001 -0.062092 -0.048478 0.000000 0.000000 0.000000 0.034254 0.034254 -0.057654 -0.057654 -0.057654 -0.058058 -0.058058 -0.271880 0.140580 -0.073076 -0.118090 -0.118090 -0.118090 0.147410 0.147410 0.147410 0.156660 -0.276910 -0.276910 0.151140 -0.286910 -0.264020 -0.258660 -0.070001 -0.070001 -0.062092 -0.048478 -0.048478 0.171360 0.166870 0.000000 -0.047233 -0.047233 0.030125 0.162950 0.034254 0.034254 -0.057654 -0.057654 -0.057654 -0.057654 -0.058058 -0.058058 -0.058058 -0.271880 0.140580 -0.073076 -0.281560 -0.118090 -0.118090 0.134800 0.147410 0.147410 0.596920 0.179350 -0.055903 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 0.000 9.07595961 12.37432956 7.49571994 10.38439124 4.25759150 10.75521366 2.89369226 1.50136271 8.50839339 8.87531871 1.08630822 9.21938515 3.45555738 9.99971679 9.59742242 2.08634220 10.05978694 10.32950261 11.70700670 9.08820601 9.61130777 8.82667178 10.93364706 3.08632521 9.09755602 10.19572407 5.30872127 2.50136271 9.98769846 5.22928797 12.88588013 11.53065340 8.31994844 10.28108548 8.12707504 9.13526961 8.12341789 1.50136271 1.50136271 5.65111198 8.43358085 8.64602437 10.17113701 6.87640521 9.03873027 7.29252870 9.63771656 6.55121453 9.46209221 0.08637617 12.39902259 3.20180635 6.80970511 9.97974657 6.00200936 5.59939814 9.63707548 8.13436112 7.03274775 -1.49858633 13.75085002 0.82326023 10.21689921 NA 7.71081952 6.44973304 8.07879501 8.90117825 13.336684 5.977099 8.017066 13.317200 9.939118 11.194200 12.877966 12.404212 8.970520 11.124790 13.557877 11.013613 9.600714 9.175559 NA 7.713255 12.660449 11.466790 7.343717 8.736184 9.347640 8.308721 10.964104 6.734986 8.067420 11.360318 5.841216 5.478645 8.342144 6.609316 11.470393 10.956180 8.452651 8.104992 13.163701 5.841216 11.535581 9.834521 10.448272 9.757575 11.641717 10.636113 11.067420 9.412009 4.768153 9.102246 7.420230 10.855616 5.599398 11.056638 10.070272 6.997660 13.894153 9.600714 10.299433 12.712570 10.649525 10.180846 2.823301 TCGA-BH-A0EA 72 1 991 NA breast stage iia t1c n1a m0 female 2008 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 5 2 2 NA 2 2 3 4 2 4 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 9.91752320 9.74884695 11.91591619 9.55780581 8.32253210 8.79930688 10.34976864 9.12525847 10.92677358 12.24571960 10.85142846 10.32037388 3.46023144 13.35985123 3.89086495 10.12957887 7.88211356 8.63189804 10.48163407 12.67360001 1.52165383 15.07071486 6.98651788 9.70160762 10.35293934 7.11159580 -1.06340917 11.25775218 8.69155720 4.32898722 8.34181100 7.69822056 -0.06325843 4.02413348 9.96664705 9.91823699 10.11720049 10.71227988 9.93666959 11.47534358 2.10658283 10.13572852 15.03270528 8.67941711 10.65434603 11.53611761 11.29943540 5.24045172 7.37546175 9.02014907 11.47048602 NA 11.27206000 4.98106261 5.12649386 5.06595137 10.07366080 11.78196367 10.59175308 12.32468692 12.68318397 9.03601752 10.87293947 10.77674333 11.04650027 11.27707615 5.84355931 10.95138759 11.74100238 NA 11.04257813 8.98787848 3.94296484 4.66459092 11.02909649 9.73027295 10.41392194 9.21163014 6.02413348 9.55872147 13.48464860 12.57781825 10.44891633 10.06659660 -0.0693890 1.0806000 1.1011000 0.0322220 0.0287030 -0.0315530 -0.0306760 -0.0769490 -0.0641620 0.0025772 0.0025772 0.0000000 0.1423000 0.1423000 -0.0084967 -0.0084967 -0.0044895 -0.0329870 -0.0310070 -0.0135980 -0.0167620 0.0494800 -0.0420330 -0.0420330 -0.0420330 -0.0374110 -0.0374110 -0.0374110 0.0232270 -0.0693890 -0.0693890 0.0106440 0.0322220 -0.0315530 -0.0315530 -0.0306760 -0.0300520 -0.0769490 -0.0641620 -0.0770310 0.1612400 0.1612400 0.0025772 0.1691900 0.1691900 0.1691900 0.1691900 0.1423000 0.1423000 -0.0170540 -0.0084967 -0.0044895 -0.0044895 -0.0329870 -0.0310070 -0.0310070 -0.0135980 -0.0167620 0.0494800 -0.5519000 -0.0420330 -0.0420330 -0.0093248 -0.0374110 -0.0374110 0.0232270 0.0221050 -0.0397230 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 0.000 9.15946445 12.89811934 7.43252436 10.39456344 2.74403189 11.38013125 2.52162870 3.63711172 8.63015644 9.33648157 0.93666620 9.46421511 4.36293271 9.92108816 9.36921149 NA 9.05820310 9.33968168 10.41392194 9.77666069 9.45799518 7.23587733 12.51457047 -0.06325843 8.85851072 10.15886072 3.74402113 NA 10.79775651 9.41543926 12.83630979 11.81510378 9.24614606 10.19169823 7.31604797 8.91680921 7.17984342 NA 1.74403189 5.31171018 8.70319866 9.65776879 10.12587643 6.65776861 9.02721876 6.59488142 10.01615447 6.75684850 9.55597256 NA 11.27206000 2.74403189 4.66459092 9.74043752 6.11339213 4.25859430 9.68486256 8.54029584 7.15098913 -0.06325843 13.99288397 0.93666620 10.17268377 NA 7.84355994 8.77272002 8.35029745 9.07622103 12.41543926 3.32898004 8.55137951 13.35985123 10.18992621 10.97387341 12.67360001 12.00107560 8.98515657 10.61086189 13.53693103 10.99770325 9.02014907 8.44049547 -0.06325843 7.44446416 11.06916939 11.395845 7.316048 8.845062 8.836027 7.081328 10.768943 5.744024 6.737569 10.851428 7.150989 2.106583 9.097801 4.873306 12.594546 10.425514 8.406311 8.311709 11.566709 5.819313 11.052022 10.117200 10.231865 9.753653 11.407329 10.628849 10.808575 9.067240 5.106595 9.356988 6.346060 11.272060 7.050411 10.983453 10.073661 6.936670 14.232439 9.832245 10.329524 12.980893 10.313338 9.950690 4.428524 TCGA-BH-A0EB 69 0 NA 745 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 5 5 2 NA 3 1 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.774378e-07 10.45263548 9.99540565 11.73622873 9.40016816 8.44038044 9.38248353 9.87359299 9.94569343 9.58964590 13.84659848 10.84959432 10.62827419 -0.01770913 12.70248858 3.04120793 9.65001847 6.33986781 8.41555334 9.89769710 13.14412982 0.98229087 13.59045488 5.04120793 9.93165602 10.24675817 6.93651192 -0.60274465 13.45235711 9.41207101 0.98229087 8.80674390 7.27079709 -1.60252558 5.26771931 10.11374386 10.58933758 10.81441448 10.97949508 10.22469583 10.85165239 NA 10.93335738 14.61470500 8.50539397 9.25377872 11.72672902 11.30893231 4.01205908 2.78966666 8.99540565 12.49431527 1.56730206 11.31845017 5.33986781 6.99354304 4.78967188 11.02351839 11.74067763 10.68333319 12.00860849 12.61015343 8.60314636 10.96602180 10.75380507 11.25882776 11.06601652 4.56727772 11.71561345 8.73942791 -1.60252558 10.37320111 8.89520506 3.25832293 6.17871265 11.26269976 10.16181011 9.95720814 9.88318243 2.98230913 8.86902837 12.73497500 11.32513104 10.13375500 9.70455385 -0.1742400 0.4616100 0.4789000 0.1512900 0.1451200 -0.1717000 0.1416200 0.1533800 0.1477300 -0.1649700 -0.1649700 -0.1813100 -0.1671400 -0.1671400 0.0000000 0.0000000 -0.0091415 0.1506900 0.1506900 0.1469700 0.0788710 -0.0993410 0.0167050 0.0167050 0.0077796 -0.1303100 -0.1303100 -0.1303100 0.0960890 -0.1484900 -0.1742400 -0.1638300 0.1451200 -0.1717000 -0.1781000 0.1416200 0.1416200 0.1533800 0.1477300 0.1589100 0.7100100 -0.5074300 -0.1649700 -0.1692900 -0.1692900 -0.1696500 -0.1545100 -0.1671400 -0.1616600 0.0000000 0.0000000 -0.0045695 -0.0045695 0.1506900 0.1506900 0.1506900 0.1469700 0.0788710 -0.1009200 -0.5074900 0.0167050 0.0167050 0.1411700 -0.1303100 -0.1303100 0.0960890 0.1632500 -0.4870100 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 0.000 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 0.000 9.3595262 13.6182604 6.2175312 9.7723926 2.4848084 10.4082308 -0.6027447 -1.6025256 7.9615024 8.7136346 2.0977793 8.4953850 0.7193149 10.4911008 8.8392599 0.3973649 8.2615393 9.0375980 9.5822284 10.2341924 9.5465922 7.3973529 11.3973531 4.6261704 8.8319814 9.4506003 1.8567865 0.9822909 10.9289782 1.8567865 12.9149610 12.6617224 8.2254894 10.7385939 8.9719467 9.2777019 3.2553345 1.5673021 0.3973649 0.3973649 8.9297091 10.3416992 10.7091014 4.4848148 6.6577557 5.1655382 10.3853276 6.0412101 9.4085803 NA 12.3530030 4.3042409 4.1522402 9.1766210 6.3268483 6.2860957 9.9189536 7.9248303 8.0890966 -0.6027447 14.2166590 0.7193149 10.3519129 -1.6025256 8.7918157 5.1522402 8.1472227 9.2055127 13.198127 4.997265 8.433527 12.702489 10.610457 10.852680 13.144130 12.297465 9.419020 10.938692 13.253292 9.090840 8.995406 9.116742 1.397365 7.371768 11.834715 10.8436611 7.7745637 9.2095304 8.8309385 7.9384499 9.8635264 8.0412090 7.7125029 10.8495943 6.6261719 0.9822909 5.1252750 6.0127988 10.8152056 10.3515494 8.9345713 8.7971651 12.0528838 7.2799959 11.4707349 10.8144145 10.8275443 9.8078044 10.8552469 9.1770724 10.5716546 9.2006770 NA 9.9720223 7.2143366 11.3184502 7.9110809 10.1488971 11.0235184 7.2679955 14.0068037 10.4864724 10.8285895 12.9210375 9.6333673 9.3214233 2.2047042 TCGA-BH-A0EE 68 0 NA 943 breast stage iib t3 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white NA 6 3 2 NA 1 6 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.161568e-07 10.844965 9.824606 11.846933 7.114548 7.958280 9.286795 9.415415 10.416828 10.708485 12.831711 9.858813 10.489168 2.590985 15.302056 4.778613 9.828329 5.266550 8.526970 6.668988 12.569776 -0.578844 10.049507 7.165895 9.746367 11.203855 6.948538 1.880490 10.479709 12.582351 NA 6.580932 7.357699 NA 1.742998 9.711656 9.646871 9.023760 10.188418 9.723700 11.113023 1.228419 9.088173 13.802266 7.431813 9.404055 9.720842 9.389728 4.630516 NA 8.212224 13.093155 -1.579060 11.274371 3.975649 6.375258 5.339925 7.148982 12.366322 9.805305 11.792974 12.089281 4.375255 11.234442 10.618892 10.965784 10.957794 3.465452 11.639170 8.446201 3.006029 10.516458 7.930836 3.516986 3.006029 8.039447 9.468867 9.155771 8.550344 -1.579060 11.713383 13.183910 11.718407 10.312845 10.518764 0.40976000 0.40976000 0.55341000 -0.00052108 -0.00052108 0.00000000 0.16884000 0.00586440 -0.00049133 -0.60310000 -0.58302000 0.63577000 0.27162000 0.28711000 -0.13959000 -0.13959000 -0.13959000 -0.57977000 -0.29088000 -0.29813000 0.55784000 0.11187000 -0.59310000 3.65690000 -0.57029000 0.02023600 -0.16838000 -0.16838000 0.54334000 0.40976000 0.40976000 -0.27054000 -0.00052108 0.00683790 0.00000000 0.16884000 0.16884000 0.00586440 0.00586440 -0.00049133 0.00572540 0.00572540 -0.60310000 0.98975000 0.98975000 0.02374000 0.02374000 0.27478000 -0.60659000 -0.13959000 -0.13959000 -0.13959000 -0.34753000 -0.58988000 -0.29088000 -0.29088000 -1.12900000 0.55926000 0.11044000 -0.28534000 -0.59310000 -0.54590000 -0.00881940 0.02023600 -0.16838000 -0.28308000 0.38853000 -0.58134000 0.272 0.272 -0.140 -0.140 -0.590 -0.590 -0.311 0.551 0.112 0.239 -0.046 -0.570 -0.570 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 0.000 0.272 0.272 -0.140 -0.140 -0.590 -0.590 -0.311 0.551 0.112 0.239 -0.046 -0.570 -0.570 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 0.000 6.93676159 9.58910655 0.42104821 7.79392644 1.63983413 10.69922028 2.22841853 NA 8.96118920 9.46066578 NA 4.64987983 1.22841853 11.18510350 9.37453027 3.66899274 4.00601969 9.50984961 8.74973638 10.37052330 9.67778887 5.78738283 9.78355307 -1.57905954 9.72255756 9.48108174 0.00604663 -1.57905954 11.87008093 3.12149622 12.89133885 13.04311311 6.27281078 10.02746649 12.06829485 9.58785195 5.78738283 1.42104821 -0.57884404 5.54000246 8.12150088 10.24522444 10.70009140 1.59100913 9.71167919 7.66898849 9.85412503 4.76091285 11.58926327 0.00604663 9.94609261 -0.57884404 3.66899274 9.32223734 5.58827989 4.39834353 10.38395728 6.65946651 7.38395739 -0.57884404 13.82277414 -0.57884404 10.36137492 -0.57884404 7.16925459 2.94461485 8.75421676 8.92984632 8.0412813 7.8389140 9.1395941 15.3020557 9.8983136 11.6874086 12.5697762 7.9794818 9.3992497 8.9679556 12.9129770 8.5503443 8.2122240 10.5438893 0.4210482 6.2089639 11.4822637 10.86711067 4.79609933 9.55869296 8.43647628 8.11802898 9.71584276 5.87227225 4.39834353 9.85881341 11.46340467 -1.57905954 6.58093236 9.08404991 11.99849012 10.39690923 8.75756769 9.82033918 7.56826625 5.57080899 12.36573217 9.02376017 11.53951576 9.44204132 10.91166148 9.37743744 10.34215836 8.03577125 6.91691607 9.93835667 6.07211223 11.27437081 8.12323422 9.52762420 7.14898188 8.25407764 14.34953340 11.07748616 10.52958575 11.81552400 11.32381324 8.87124148 0.00604663 TCGA-BH-A0EI 51 0 NA 743 breast stage iia t1c n1a m0 female 2008 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino 2 2 1 NA 2 4 1 1 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 10.7559216 10.2446132 11.9989733 10.0177740 8.4349601 8.3757980 9.8248218 10.5048892 9.0549179 13.6470655 11.7965905 10.9057641 1.2125693 12.6636928 4.1511688 9.0736545 6.3418506 8.7684348 9.7975301 12.9730103 0.2125071 14.8721919 2.5344850 9.1226406 10.5303570 9.5434845 -1.3725799 10.4228330 8.4106031 1.9495349 7.9807520 8.7478429 3.1511607 5.0026440 9.9467126 10.0617119 8.7190403 11.4146914 9.5487021 11.8899936 -1.3725799 9.7912547 14.8855453 8.3685492 9.7690480 11.1821939 11.8888185 5.5583411 NA 9.1687017 10.9870801 -1.3725799 11.3849951 8.6963834 5.2275178 4.8370602 10.8044015 12.0775275 9.9917397 12.3604084 12.6587031 8.2624162 11.1239595 10.9599214 11.6800032 11.5901396 9.4368265 11.4832522 12.8489656 -0.3723932 10.9865309 8.9585220 3.0206089 4.6499718 9.8473786 10.1677331 10.5431110 10.0369960 3.6276068 8.1194584 13.0073218 11.1896089 11.0324805 9.8025307 0.00041593 0.00041593 -0.00180140 0.00235810 0.00489070 0.01140000 0.45820000 -0.00027724 -0.57079000 3.65690000 0.01810300 0.01810300 -0.00719580 -0.00719580 0.47084000 0.40494000 0.44799000 0.00000000 0.00000000 -0.60374000 -0.00263220 -0.01354000 -0.56763000 -0.01972600 -0.01972600 -0.04007300 -0.04007300 -0.04007300 0.43058000 -0.02430500 0.00041593 0.00194180 0.00235810 0.01140000 0.01140000 0.28016000 0.01405900 -0.00027724 -0.55136000 0.00430210 -0.00415460 -0.00415460 -0.57989000 -0.01230000 -0.01230000 -0.01230000 -0.01230000 -0.00719580 -0.00719580 0.45295000 -0.52685000 -0.56555000 -0.56555000 0.00000000 0.00000000 0.00000000 0.00346870 -0.00263220 -0.01354000 -0.02767100 -0.56763000 -0.01972600 -0.00539920 -0.04007300 -0.04007300 0.43058000 -0.01725400 -0.04170200 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 -0.185 0.119 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 -0.185 0.119 9.4612858 14.3894159 12.3543554 10.1648235 3.3824874 10.7134095 -1.3725799 -1.3725799 8.2106879 9.7716260 NA 8.0864218 3.5817971 9.8820432 9.0901074 1.2125693 9.4195819 10.3044436 9.8062699 9.3966163 9.3780358 8.1134343 11.0934265 1.7975111 10.0129283 9.6499729 1.4349351 NA 10.5649788 5.1194599 12.2940510 11.9377917 8.3035620 10.8838137 8.1053633 8.9060545 5.8370577 3.0870385 -1.3725799 2.4349618 8.6105986 8.5524174 9.6617161 3.5344974 9.1536934 6.1033382 9.6034530 6.3824926 9.6889762 -1.3725799 10.4497775 3.6719953 5.2569616 9.6519621 6.3731105 0.6276068 9.2615085 7.8920479 4.7568899 0.6276068 13.9203580 -0.3723932 10.7912547 NA 8.5133012 5.5344943 9.1423190 9.5284719 15.590184 5.725638 8.417139 12.663693 10.201725 10.134904 12.973010 12.514826 9.712414 10.935944 12.816426 9.022068 9.168702 9.251486 NA 7.919926 12.499703 11.335827 7.053869 8.784952 8.681531 8.743949 10.457268 5.522423 6.827278 11.796590 7.234935 7.564243 9.461286 7.379818 12.749624 10.118456 9.691674 8.971901 12.543951 3.271456 10.201072 8.719040 10.200305 8.908376 10.912140 9.682888 10.473095 8.945018 1.212569 8.388208 3.797532 11.384995 9.863619 10.135895 10.804402 7.041233 14.269149 9.779256 9.529980 12.629629 10.429313 9.617000 1.212569 TCGA-BH-A0GY 67 0 NA 923 breast stage iia t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 3 white NA 6 3 4 1 2 2 2 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 9.6725146 10.0187859 11.4364074 9.1163557 8.0004880 9.1522369 9.6572902 9.9579577 10.4599194 14.0886974 10.2219728 10.5093984 5.6836319 12.2883627 1.8507594 9.6772891 3.8507394 8.9328897 8.2770056 11.9230407 2.7576207 13.3663173 3.6056247 9.8403834 11.4880448 4.5231667 -1.1491206 10.1227871 11.4077256 2.4357086 7.2214276 7.6709196 2.9382105 3.8049415 10.1568023 10.7291748 10.1917034 11.6659238 9.8136366 11.6273793 5.1175288 10.1983620 14.4668012 8.1487115 8.7917884 11.1782933 11.2306604 3.4357086 0.4357353 10.6946617 11.1525226 NA 10.7542459 5.3264726 6.7333842 4.8049364 10.6333294 11.7220684 10.4399236 12.8834752 12.6891567 7.2558821 10.4891765 9.6766057 10.8154425 10.8358710 4.8280222 11.2165163 9.1022230 -1.1491206 10.6143680 9.5555089 3.2243953 5.5511807 11.2596010 10.0577550 10.1810973 10.0735355 2.4357086 7.9696818 12.7448005 11.4050896 9.8514449 8.7873786 1.0822000 0.4082100 0.4082100 -0.0086327 2.8486000 -0.0284100 -0.0077570 0.0045984 0.0045984 3.6569000 1.3958000 3.6569000 0.7246300 -0.0394490 0.3253700 0.3253700 0.3253700 0.3469000 0.3469000 0.0226940 -0.0303320 0.3506500 0.0119090 0.0119090 0.0119090 -0.4154700 0.8686200 2.8908000 2.6446000 -0.4280500 1.0822000 -0.0217030 -0.0086327 -0.0284100 -0.0284100 -0.0077570 0.0000000 0.0045984 0.0045984 0.0135750 0.7452900 0.3231100 -0.0815260 -0.4429200 -0.4429200 -0.4429200 -0.4305800 -0.0394490 -0.0394490 0.3227900 0.3253700 0.3253700 0.3253700 0.3469000 0.3469000 0.3469000 0.0277350 -0.0288200 -0.0436570 -0.4541800 0.0119090 0.0119090 -0.4287000 0.3439800 0.8927900 1.4349000 0.3447900 -0.3759900 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.428 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 0.144 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.428 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 0.144 8.1128356 13.9022470 8.4319413 9.4918892 3.1279799 10.1855726 2.1726795 -1.1491206 8.6580954 7.0891454 0.4357353 8.2604073 2.8507394 10.5271385 9.3385806 1.8507594 8.5354892 10.4571459 7.7149269 9.2874522 9.2270072 7.9141357 10.2942022 1.6580972 7.1816572 9.3947390 4.2082909 -1.1491206 10.2973070 2.5511715 13.1630564 12.1559474 7.7516077 10.0399474 9.9909313 9.6836307 7.4243880 2.3101656 1.1726795 9.9434978 8.0256661 9.6197519 9.6891567 4.3425903 8.2259107 6.8394255 10.5359275 5.1361422 9.3565521 -1.1491206 9.1994687 3.8049415 3.1726635 9.5089877 5.8773197 4.9382058 9.2696473 7.5820599 7.2685935 6.1636235 13.8505205 -1.1491206 10.2874522 -1.1491206 8.8150816 4.3425903 8.1905907 8.6677243 12.556371 8.005559 8.219247 12.288363 9.734148 10.375772 11.923041 11.412506 9.177271 10.823720 12.689452 11.304011 10.694662 8.638643 NA 7.159080 12.721298 10.606880 5.828020 10.475993 9.887601 8.110484 9.953976 6.397635 9.458071 10.221973 8.055312 1.435682 5.000487 7.642815 10.612707 9.954028 9.317327 9.165890 10.927890 5.959265 11.777737 10.191703 10.569273 10.208293 11.075044 9.636193 10.285890 9.756880 NA 8.961733 6.382123 10.754246 7.424388 10.225237 10.633329 7.186131 14.376506 9.987732 10.164757 12.606150 11.178293 8.910085 1.658097 TCGA-BH-A0GZ 62 0 NA 328 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white NA 3 1 3 6 NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 9.79065721 9.67192349 10.72925663 7.82155142 8.61486515 9.60513223 8.68037500 10.18742878 9.99419063 14.14282964 9.02371666 10.49109689 2.10882551 12.63739581 3.02637515 9.23122982 7.52010869 8.03430542 8.95988808 13.26765320 1.26080853 13.30768742 4.26083864 10.63048592 10.37040581 5.84579863 1.26080853 8.76863096 10.73980803 -1.06099915 6.70045914 7.42674781 2.93890678 4.18683330 9.19511674 10.52527884 10.68079640 10.34776862 9.57008528 10.81580876 2.74626976 11.23582439 14.51110507 7.71997263 8.93890825 10.84166010 10.76227539 5.10883387 4.26083864 8.07845933 11.00802223 -1.06099915 11.20217734 5.04743369 5.43076029 4.43076029 9.89673579 11.71616350 10.87075370 11.65250948 12.57247106 9.33872012 10.99079684 10.52340092 11.43201306 9.71944786 4.10883387 11.76585382 11.85702602 -0.06114966 10.30139994 9.03166537 4.22431045 3.26083864 11.51751675 9.59979553 9.90035785 10.14347926 3.74625901 8.91475615 12.54785598 11.03298586 10.23180486 9.33122555 -0.69696000 0.65381000 0.65381000 0.00578030 0.00000000 -0.69291000 0.00703190 0.00369590 0.00369590 0.25287000 0.25287000 0.26524000 -0.00655530 0.00300160 -0.00018913 1.45230000 1.98410000 -0.00337480 -0.00337480 -0.71621000 0.00092011 0.00216870 -0.00169310 -0.00169310 0.00036541 -0.00821270 -0.00821270 -0.00821270 -0.00862690 -0.68991000 -0.69696000 -0.01028300 0.00578030 0.01121000 -0.69291000 0.00092011 0.00092011 0.00369590 0.00369590 0.00369590 0.00258510 0.00258510 0.25287000 0.00272390 0.00272390 -0.71367000 -0.68518000 -0.69598000 -0.72078000 -0.00018913 -0.71242000 -0.71170000 -0.00724610 -0.00337480 -0.00337480 -0.00337480 -0.69073000 -0.01207500 0.00216870 0.00244630 -0.00169310 -0.00169310 -0.00641710 -0.00821270 -0.00821270 -0.00862690 -0.00060493 -0.70202000 0.000 0.000 -0.700 -0.700 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 -0.120 0.000 0.000 -0.700 -0.700 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 -0.120 8.56095984 13.25787457 7.02637073 10.21328628 2.42819600 11.19275564 1.26080853 -1.06099915 8.11881704 8.88142266 3.63934794 8.05525206 5.34829971 10.77535307 9.20920355 3.26083864 7.79065737 9.20100303 7.07845933 11.83977496 8.91783301 6.94453287 11.45411522 0.93892559 9.79999502 9.60956439 2.93890678 -0.06114966 11.00835796 4.18683330 12.11710615 11.77771814 8.70212038 9.97851270 7.29646016 10.39320745 6.56826473 0.93892559 0.93892559 7.58276447 9.37666025 9.47223796 9.68290103 4.06818926 8.98140203 7.88727546 10.67234728 5.78439928 9.46442894 0.93892559 11.02868966 1.26080853 7.85179775 9.72382099 6.75518803 4.10883387 9.12254357 7.12873263 7.34829882 5.49349683 13.88754916 0.93892559 11.04579822 NA 7.88142297 6.55361854 8.37769988 10.27485672 13.614534 5.881422 8.170129 12.637396 9.378739 11.482665 13.267653 11.697756 8.412614 10.173127 13.002388 8.682060 8.078459 9.444720 -1.060999 7.485803 11.546701 11.258016 7.031665 8.779686 8.542534 8.430761 9.754836 5.508765 7.394235 9.023717 8.692125 1.746270 4.553619 8.114233 10.363074 9.874810 8.073335 9.150797 9.059146 4.365175 11.980655 10.680796 10.610449 9.165320 10.829932 9.494456 10.749881 7.589960 3.796888 8.636328 5.224310 11.202177 8.499241 10.513923 9.896736 6.215032 13.360841 10.044817 10.090559 12.190539 10.462960 9.378739 2.938907 TCGA-BH-A0H0 69 0 NA 461 breast stage ia t1c n0 (i-) m0 female 2009 NA NA infiltrating ductal carcinoma 0 white NA 3 1 5 3 NA NA 1 1 4 1 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 10.648411 9.822737 12.798417 10.113724 8.879486 8.331554 11.120716 9.206352 10.732055 14.614219 7.201744 10.699738 1.806778 12.940373 4.037083 9.674303 5.982864 8.514676 9.601202 13.161248 NA 14.196666 7.956534 8.842106 11.172268 9.427147 NA 10.404982 9.151424 3.391754 10.095741 6.025210 NA 4.565780 9.935673 11.223665 9.019236 11.423901 9.752905 11.505491 1.565792 11.208814 14.866404 6.531143 10.114425 11.243658 10.337868 3.834266 5.382470 9.264325 9.272510 NA 10.618346 3.060549 4.764558 3.060549 9.876598 12.138565 10.222690 11.843805 13.216504 8.209634 11.167887 11.271571 11.746026 11.571785 5.437264 11.997181 12.740420 NA 9.910881 10.335165 3.398391 4.172440 10.016989 9.603699 10.602951 11.442853 1.913684 5.266217 12.505624 13.156153 10.406985 9.390014 -0.0249530 1.4316000 1.4316000 -0.0084385 -0.0084385 -0.0048461 0.0000000 0.0026357 -0.8590000 -0.8395400 1.4680000 1.4574000 0.0120970 0.0120970 0.0122080 -0.8384900 -0.8384900 0.0037465 0.0037465 -0.8429100 0.0143300 -0.8374400 -0.8217100 0.0266540 0.0266540 0.7879400 0.7794500 0.7867800 0.0238470 0.0043863 -0.0202750 -0.0137040 -0.0084385 -0.0048461 -0.0048461 0.0000000 0.0000000 0.0026357 -0.8590000 -0.8590000 0.0012481 -0.0013687 -0.8395400 0.0081959 0.0081959 0.0081959 0.0081959 0.0120970 0.0120970 0.0141900 -0.8384900 -0.8476700 -0.8489400 0.0037465 0.0037465 0.0037465 -0.8429100 0.0143300 0.0232860 -0.8249700 -0.8217100 0.0266540 0.0237060 -0.7957800 0.7867800 0.0238470 0.0168450 0.0472680 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 0.000 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 0.000 7.6338235 9.4835570 5.0488596 9.2148711 3.5326162 9.8321389 NA -1.8937857 9.0532528 6.3206652 NA 6.6141415 2.6913108 10.2740783 10.2010840 4.6609343 7.6279468 9.4428531 8.0444559 10.6247539 10.1139276 9.3115290 9.8184437 2.1063483 9.8380898 9.8452832 2.4282764 NA 10.4911303 2.8612408 11.9182229 11.9264258 6.9137020 9.3145810 6.6220460 10.0359748 5.1831609 -0.3086445 -1.8937857 4.6141385 8.2998720 9.0087216 11.7400230 4.8877056 5.6992518 7.0778903 10.0296740 6.8545393 10.1175738 NA 10.5868843 0.4282496 4.5981984 9.5939102 4.9550942 3.2356352 7.7357029 7.9874607 6.8712178 -0.3086445 13.4931521 0.4282496 9.8414794 -1.8937857 8.5585879 4.5492872 7.6299088 6.3824701 11.565394 6.025210 8.782304 12.940373 9.616121 10.872875 13.161248 11.580686 8.241607 10.714139 12.688018 11.175796 9.264325 9.273765 5.095030 7.532612 12.296943 10.726108 8.343557 8.748398 8.965881 9.743424 10.341948 5.614141 7.948697 7.201744 4.964329 -1.893786 8.034124 8.268990 8.022226 8.394059 7.238203 8.770794 12.618964 4.976712 10.969466 9.019236 10.526043 9.275019 11.556913 9.688959 10.984781 8.930510 NA 8.951546 4.900761 10.618346 2.964325 10.559103 9.876598 8.638702 13.286528 10.278149 9.929316 11.470481 9.531562 10.427429 1.565792 TCGA-BH-A0H3 46 0 NA 1149 breast stage i t1c n0 m0 female 2008 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 2 6 NA NA 3 4 2 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 10.83478357 10.39402896 12.04437472 10.08415929 8.50262339 9.45366964 9.82609114 9.78393901 10.02238571 12.80900155 11.39472066 10.71110527 4.04062069 12.96427050 3.89175940 9.43764701 6.88389692 8.93900173 10.93258498 12.65864815 2.53811597 14.23928429 5.53812218 9.56109411 10.48486608 5.06863642 -1.63173452 11.31528624 8.91219566 3.53812839 7.48713821 7.60181684 0.95315347 5.37942342 10.26452963 10.41190815 10.27846526 11.36007336 10.31619938 11.77586333 3.57764635 11.16241002 14.94116387 8.72458309 9.79708076 10.50037564 11.75944083 5.05469656 4.17554855 9.40574416 11.74771098 -0.04677202 11.04899629 5.52806804 6.44501319 5.61612535 10.38570162 12.01801475 10.74323666 12.78545643 13.03014231 8.15283190 11.24720604 10.95849421 11.54577251 11.52680692 5.63498235 12.89396273 12.25656000 -1.63173452 10.25274939 9.32384718 3.58077261 5.53812218 11.19036973 10.54312290 10.10671172 9.89665134 3.79445746 8.70135256 13.13715690 12.84942907 10.01610529 9.76800927 -0.00622860 0.87787000 0.87787000 0.00013863 0.00013863 -0.00041585 0.00847430 0.00110930 0.00110930 0.03834700 0.03834700 0.03622900 -0.00216260 -0.00216260 0.00000000 0.00000000 0.00000000 0.00124810 0.00124810 0.01586600 0.00137150 0.00235810 -0.00857660 -0.00857660 -0.00857660 -0.00512270 -0.00512270 -0.00843850 -0.00193990 0.00791750 -0.00622860 -0.00110870 0.00013863 -0.00041585 -0.00041585 -0.00489490 -0.00489490 0.00110930 0.00110930 0.00110930 0.01233700 0.01684500 0.04741000 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00216260 0.00346870 0.00000000 0.00000000 0.00000000 0.00000000 0.00124810 0.00124810 0.00124810 0.01586600 0.00346870 -0.00443120 -0.48323000 -0.00857660 -0.00857660 0.04244900 -0.00512270 -0.00843850 -0.00193990 -0.00055444 0.00180300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.26906401 13.40655900 8.18837620 10.04503581 3.67161041 10.22072681 1.17555654 0.36815371 8.46885942 9.29003821 -0.63173452 8.58988106 2.82763614 10.05425998 9.11555117 0.95315347 10.51953100 9.64257541 10.25960122 9.07037001 9.49980344 8.06168441 11.21994630 4.09611845 9.16342527 9.69406479 4.84392859 NA 10.54405865 3.36819563 13.08844150 12.13275788 9.09100476 10.26036057 7.92086612 8.82865316 3.53812839 1.36820960 0.69010416 5.81113960 8.39056494 9.21133325 10.08330127 5.75190285 5.95188149 4.81114217 10.46820247 6.25694082 9.72189553 NA 10.98083540 2.69012652 4.98290690 9.77456174 6.37427095 4.47671867 9.26225720 8.63615440 6.35119014 NA 13.94509488 1.69010416 9.93852737 -0.04677202 8.74432258 6.37382219 8.03353313 8.72244656 13.0915313 3.9227877 8.5654140 12.9642705 9.8645517 10.7688099 12.6586482 12.2333505 9.4979438 11.1249621 13.4541261 11.3440452 9.4057442 6.8759913 -0.6317345 7.3223933 11.6405354 11.447015 7.790262 9.366788 9.075556 8.300412 10.464145 6.333982 6.592198 11.394721 5.577649 4.827631 6.662818 5.076662 12.943205 10.642867 8.807717 7.977376 12.536478 6.445013 10.684872 10.278465 10.370309 9.778119 11.368902 9.724099 10.690125 9.401620 1.690104 9.347858 6.298935 11.048996 8.511580 10.786804 10.385702 7.674259 14.447828 10.116390 10.603314 13.116495 10.099516 9.985665 1.175557 TCGA-BH-A0H5 45 0 NA 1620 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 7 2 2 NA 3 5 3 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 10.6075243 9.5723004 12.0491953 9.5991487 8.9475718 10.1740428 9.9198162 10.0888690 9.4197426 12.2569096 11.1325682 10.6913390 0.1750455 12.5975728 2.6774857 9.5295990 6.6721693 9.0718192 9.1945732 12.0405868 2.0494565 12.8035798 4.8379483 9.8651434 10.0798678 7.8188384 0.5900510 12.4102956 9.1311164 3.2904539 8.6695048 7.5118610 -1.4100448 6.4908862 9.9688565 10.0094534 9.9688565 11.5012246 10.0943423 10.9563421 10.6075243 10.6473347 14.8722939 8.7072473 10.3046861 11.4147798 10.9417873 4.8754213 4.1446093 9.0848753 12.2500158 NA 11.0394265 7.3713794 8.7167245 5.4355086 10.5730135 11.8742656 10.5391170 11.7239648 12.7821585 7.7115534 10.7752051 10.5187381 11.3249411 10.9809949 4.3179408 12.2283427 11.4151775 NA 10.5066458 9.2001220 3.3978851 8.8719499 10.9293132 10.2557999 10.1316005 9.9999411 3.4969097 8.9453710 13.2032914 14.0115917 10.2952202 9.5014119 0.06494000 0.06494000 0.06494000 0.00166420 0.00166420 0.00000000 -0.00325910 0.00027728 -0.00151890 0.00124810 0.00124810 -0.00345690 -0.00027724 0.00485790 0.01447000 0.01447000 0.01447000 -0.00310010 -0.00069303 -0.00756930 0.00013863 0.00471900 0.00291330 0.00291330 0.00291330 0.00555290 0.00137370 0.00137370 -0.00318590 0.06494000 0.06494000 -0.00110870 0.00166420 0.00000000 0.00000000 -0.00325910 -0.00325910 0.00027728 -0.00151890 -0.00231620 -0.00459610 0.00027728 0.00124810 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00485790 0.00485790 0.01447000 0.01447000 0.01447000 -0.00797580 -0.00310010 -0.00069303 -0.00069303 -0.00290910 0.00013863 0.00471900 -0.10366000 0.00291330 0.00291330 0.00041593 0.00555290 0.00137370 -0.00318590 -0.01409000 -0.04034500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.3807757 11.8690500 7.6206868 9.3860595 7.9735728 10.1388419 7.2120712 -0.4100448 8.7933679 8.1731024 NA 7.5386794 3.1135838 10.3175149 9.4549799 1.1749816 10.6524034 8.8972208 11.2395006 9.8556349 9.6049331 7.4386430 10.1754520 3.5442133 8.1484405 10.3331712 5.6453010 NA 11.0705576 3.2904539 13.5255993 12.3155992 7.9844828 10.2861181 9.6827771 9.2001220 5.6344132 2.2904539 -1.4100448 4.9650593 8.9715628 9.8266321 10.0591529 5.9909004 7.8530307 6.2120712 10.6189619 5.6561102 9.4268593 0.1750455 10.8585619 5.8661439 3.5442133 9.4011458 5.9023582 9.5857871 10.1479622 10.0025897 11.1086730 NA 13.9414423 2.3973649 10.3819967 NA 8.8994962 4.9119456 7.5900196 8.7823126 12.0035592 5.6880516 8.6708375 12.5975728 10.7590053 10.5140901 12.0405868 11.5336336 9.3432366 10.9170111 13.4821358 11.0725758 9.0848753 7.9431665 -0.4100448 7.4480006 10.9091274 11.018118 6.324730 9.106695 8.430798 8.157976 10.066022 9.889800 8.660141 11.132568 6.907433 4.290461 7.290459 7.945657 10.783853 11.492583 9.766193 8.276520 11.583489 9.612388 11.309595 9.968857 11.013136 9.812211 10.600898 9.909692 10.679801 8.951964 NA 10.208896 10.776753 11.039427 5.698544 10.899496 10.573013 7.457360 14.180926 10.237928 10.867307 12.983410 10.920937 9.490132 4.496910 TCGA-BH-A0H6 82 0 NA 747 breast stage i t1b nx m0 female 2008 NA NA infiltrating ductal carcinoma 0 white NA 1 5 2 3 2 2 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 9.6204116 9.6263455 11.4240454 9.3613852 8.2562479 8.0965707 10.2567262 9.6241232 9.8715044 13.3377896 11.2634054 10.0399019 3.5558039 12.5177069 2.6047119 10.1679777 5.9552151 8.6808208 9.8845605 13.0129768 2.0197731 12.8690040 6.3125363 9.9661295 11.4997376 2.7852994 NA 10.9160998 9.1966764 1.8677384 9.1886781 7.7340010 -1.3022262 4.6520218 9.3497757 10.1876752 9.8392958 11.8643041 10.0191916 11.2137734 9.6418072 11.6699095 15.0097351 7.4939963 9.8418481 11.6639721 10.7786447 3.5558039 2.3982683 8.9820729 11.3753266 NA 11.2085914 7.0242565 4.7639161 4.4257480 9.8570678 11.4740546 10.1464597 13.3734535 12.8180651 8.0016080 11.5429252 10.9888972 11.5442970 10.6957124 3.9072849 11.5253684 13.0740883 -0.3022262 10.2184459 10.1866715 3.2213822 4.5804711 10.7524315 10.9078897 10.3751063 11.1651780 4.0197553 8.8639902 13.4495282 12.7934715 9.6017090 9.5409632 0.0077478 0.0077478 -0.0053038 0.0132130 -0.0202210 -0.0183180 -0.0128510 -0.0095426 -0.0095426 2.0940000 3.2514000 3.2261000 0.0077783 0.0077783 -0.0065917 -0.0018014 -0.0018014 0.0070826 -0.0013076 -0.0156180 0.0098669 0.0418830 0.0387710 0.0387710 0.0387710 0.0520990 0.0520990 0.0520990 0.0291840 0.0077478 0.0077478 0.0543760 -0.0056041 0.0190830 -0.0209120 -0.0128510 -0.0128510 -0.0095426 -0.0095426 -0.0095426 0.0084743 0.0000000 -0.8131000 0.0019418 0.0019418 0.0019418 0.0019418 0.0077783 0.0077783 0.0459910 -0.0018014 -0.0018014 -0.0018014 0.0070826 -0.0013076 -0.0013076 -0.0110600 0.0098669 0.0168450 -0.8026000 0.0387710 0.0387710 0.7717600 0.0520990 0.0520990 0.0083351 0.0055529 0.0475520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.438 3.251 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.438 3.251 0.000 0.000 0.000 0.000 7.8876520 13.8068824 10.8674391 9.8174168 2.9735745 10.2615001 -0.3022262 NA 8.1796265 8.1552078 0.2827363 7.9312073 2.1572701 10.3715779 9.2958798 -0.3022262 7.1029688 9.1459436 10.4099242 10.5892312 9.1002105 7.0197553 11.0755800 2.1572701 10.4397155 10.1881767 7.7719687 NA 10.4754935 3.4527140 12.3861868 11.9745332 8.1114550 10.3000620 7.7852903 9.3658257 2.9457575 1.0197731 -1.3022262 2.0197731 8.8450321 9.4914304 10.1735606 4.4257480 8.5709945 7.7476761 10.6736751 7.1449101 9.5011511 NA 9.6366717 3.3982683 4.0553779 9.2153884 5.1242578 0.2827363 9.3271839 8.4560504 5.1572580 0.2827363 13.7201517 1.2827956 10.0203187 -1.3022262 8.2865421 4.8475761 8.2695798 8.6879313 13.6856255 5.0016086 8.8938145 12.5177069 10.1990922 10.3618300 13.0129768 12.0839591 9.0597709 10.4535494 12.6914733 10.1098677 8.9820729 9.1500684 0.2827363 7.4460204 12.0172171 11.013260 7.763916 9.209580 9.057577 7.811569 10.406424 6.046554 4.742222 11.263405 6.634465 1.019773 6.452714 5.885674 11.869160 10.579324 8.972788 9.034334 11.799311 3.157254 12.449366 9.839296 10.282790 9.739486 12.045033 10.156234 10.180131 9.150068 NA 9.585551 4.124088 11.208591 8.601709 10.287010 9.857068 7.260070 13.363496 10.168486 10.174067 12.390661 10.839934 9.778645 2.019773 TCGA-BH-A0H7 65 0 NA 702 breast stage iiia t1c n2a m0 female 2008 NA yes infiltrating ductal carcinoma 6 white NA 3 3 1 1 2 4 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 9.2924410 9.9234905 11.6556194 9.5804361 8.4765636 9.4285706 9.2346484 9.7907587 9.9752261 14.5302754 10.9028591 11.0510723 2.4805495 12.3539005 0.9780492 9.7843276 2.2004416 7.6854055 8.3930841 11.9111224 0.9780492 12.7648607 3.6410142 9.3650300 11.7104967 7.1711608 1.8525183 9.4140641 10.4067557 3.0369428 6.7811013 8.2322880 -0.6069133 3.6784889 9.2220138 10.1919608 7.6267034 11.4861714 9.0943905 10.5149413 0.9780492 9.8035354 14.7092065 8.0474157 9.7384894 11.1732137 10.8801704 3.7150147 6.1210050 8.9254399 11.6745795 -1.6069133 11.1746487 4.1210071 4.9476708 5.2634476 10.0637403 11.5936762 10.1433724 12.5444178 12.7201454 9.0342328 10.6767513 10.0034538 11.6210008 10.8008829 4.0935264 11.7045486 9.3341316 -0.6069133 10.0396428 10.2841083 2.2669064 4.7150147 10.1064706 9.4320031 9.8753878 11.2180428 3.0935264 7.2541707 12.3437311 10.6980057 10.2672970 9.7002849 -0.133400 0.656630 0.716030 -0.590390 0.254330 1.092300 0.125450 0.285800 -0.601380 1.067800 0.269700 3.306400 0.296600 -0.141680 0.288500 0.290240 0.302980 -0.110900 0.689430 -0.207210 -0.120450 -0.447710 0.377300 0.377300 0.126530 -0.536220 0.305940 0.281050 2.791600 -0.107230 -0.133400 0.715840 -1.292900 0.272530 0.048120 0.336740 0.429570 0.285800 -0.599250 -0.601380 0.615340 -0.033814 -1.292900 -0.578220 -0.588040 -0.146350 -0.074144 -0.141680 -0.141680 0.557080 -0.134450 -0.504630 -0.485750 -0.132670 0.680670 1.202500 -0.157840 -0.127630 -0.454790 0.305530 -0.423440 1.223700 -0.504840 -0.548950 -0.537330 1.070600 -0.248250 0.351370 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.143 -0.143 0.000 0.254 -0.138 -0.138 0.337 0.337 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 0.000 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.143 -0.143 0.000 0.254 -0.138 -0.138 0.337 0.337 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 0.000 9.31863861 14.42835570 7.59030110 10.22478710 2.85251827 10.63357725 1.39308666 -0.60691334 8.77137887 10.22280673 1.20044158 8.12127655 2.39308666 10.74843515 8.90483660 0.39308666 7.32382129 9.90631821 8.32086191 10.04503267 8.95309205 6.40431050 10.73321230 0.71501475 7.77246238 9.92349047 2.39308666 -1.60691334 10.18098660 1.39308666 12.32916983 12.51267368 8.64693162 9.76649297 9.46989961 9.67037140 6.53774179 -1.60691334 -0.02195084 2.91664861 8.20365584 9.38460591 10.15878449 3.91664861 8.89246146 6.29395162 10.20566253 6.48584058 9.83187597 NA 9.32308201 4.29997725 3.88493975 9.64963486 5.08461708 3.43748077 9.49505973 7.90681185 6.19398458 4.83602510 13.74488600 0.97804916 11.25630241 NA 8.31789645 3.88493975 8.43200314 9.62730278 13.7799166 6.5927560 9.1056110 12.3539005 9.5810546 10.6971501 11.9111224 11.7183895 8.5642608 10.4378197 12.5343929 9.9092766 8.9254399 9.4996470 -0.6069133 6.9008789 12.5287132 11.1953985 6.9399788 8.4778926 10.0247158 8.2969657 10.1348333 5.6968646 9.5345527 10.9028591 7.6314885 6.5680093 4.5630117 8.6686383 11.4541176 9.9028591 8.2698467 10.1504741 12.9082295 4.6598732 10.0975627 7.6267034 10.5866094 9.1711613 10.3639089 9.3319284 10.4749003 9.3319284 NA 9.0371205 5.3588674 11.1746487 8.7767883 10.3097100 10.0637403 7.3149249 13.5700753 10.6513556 10.2969659 12.5816729 9.7811013 9.4851805 0.3930867 TCGA-BH-A0H9 69 0 NA 1247 breast stage iia t2 n0 (i-) m0 female 2007 NA NA infiltrating ductal carcinoma 0 white NA 6 3 4 5 3 5 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.427581e-07 9.6202561 10.0163569 11.5027170 9.6065744 8.4508685 9.6137915 10.0460042 10.7569124 9.3412228 14.8438575 10.3899586 11.0231486 0.6451483 12.7076769 3.7744076 8.4232021 7.5934920 8.5154893 7.7219406 12.9003009 -0.3549440 13.7154134 4.4524768 9.6712746 10.4851158 6.1127293 NA 8.6854146 10.9426143 2.2300800 7.1409800 6.7948720 NA 2.8930515 9.8930523 10.8324768 10.1429766 10.3696386 10.3373043 11.2496780 3.2889786 11.5828663 14.8112290 8.2958355 9.6394782 11.4399467 11.7797115 4.3455667 5.1997155 9.1852528 11.4211464 NA 10.6380631 4.9849766 4.8150476 4.0374437 10.9874773 11.7593551 10.2930328 11.1409798 12.5235589 8.5876391 10.7145745 10.2482874 11.2013913 10.6563520 4.8739411 11.5095043 9.5201061 1.4524900 10.1529193 8.8484727 1.8166407 3.8150528 10.9546011 10.0004758 9.8212979 10.0390515 0.9670210 8.9771614 12.8952011 10.9927461 10.2468955 8.7352372 -0.33837000 0.63353000 0.66202000 0.00263570 0.00263570 0.01703300 0.00819590 0.00402430 -0.35670000 -0.01409000 -0.01409000 3.65690000 3.65690000 -0.33583000 0.00000000 0.00000000 0.00000000 0.00097064 1.88040000 -0.04319500 0.02454800 -0.34171000 -0.00788630 -0.00788630 -0.01253800 -0.02630400 -0.02630400 -0.02630400 3.65690000 -0.35476000 -0.33837000 -0.11495000 0.00263570 0.01703300 0.02090300 0.00446310 0.01070300 0.00402430 0.00402430 -0.00415460 0.00680440 0.00680440 -0.01491600 -0.34205000 -0.34205000 -0.34205000 -0.34205000 -0.33583000 -0.33583000 0.00000000 0.00000000 0.00000000 0.00000000 0.00097064 -0.34527000 -0.34527000 -0.04319500 0.00342760 -0.34171000 0.34305000 -0.00788630 -0.00788630 -0.35305000 -0.02630400 -0.02630400 0.28675000 0.00110930 -0.37034000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.343 0.343 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 0.000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.343 0.343 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 0.000 7.802472 12.669312 5.490615 9.345564 3.429629 11.295952 -0.354944 NA 8.612351 7.092208 -1.354759 7.832477 2.452490 10.617387 9.044937 2.345567 7.689519 8.907220 8.441164 10.563988 10.202804 7.650749 10.098395 2.967058 9.655653 9.613791 3.400019 5.667492 10.493748 1.815043 12.675447 11.968602 7.281749 10.419912 5.993853 9.849696 5.921248 -1.354759 -0.354944 6.310460 9.208321 9.428942 10.287176 5.373046 6.131678 7.844797 10.670610 5.948904 9.739202 -0.354944 11.206890 1.967058 2.645125 10.031354 6.653329 1.967058 9.617387 7.132964 7.807516 0.230080 13.208619 -0.354944 11.496093 NA 7.911911 4.288979 8.265345 8.114767 12.4203235 6.7897827 8.3542084 12.7076769 9.7556080 11.0026767 12.9003009 12.3276805 9.3983414 10.6259784 13.0543168 10.8181772 9.1852528 9.6281183 0.6451483 7.0026766 12.8554917 10.8401893 7.8075159 9.1499437 8.3386116 8.8847234 10.3953502 5.3175501 8.7125590 10.3899586 5.1208579 1.9670579 7.6080204 8.4413104 9.9078069 9.5038828 9.2726587 9.4605081 11.8292252 4.2889786 10.9993631 10.1429766 9.9982715 10.3355593 11.1946688 9.5810264 10.2612140 10.1871892 5.3316264 9.6197186 3.8150528 10.6380631 6.0629765 10.0261268 10.9874773 7.1086489 13.5895165 10.1934650 10.5493830 12.6190911 10.9771613 9.0059717 0.6451483 TCGA-BH-A0HA 31 0 NA 1611 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 1 3 5 1 1 4 1 1 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 4 5.375358e-06 1.872705e-06 9.9224772 9.3705797 11.4082488 7.3512414 8.4635628 9.1491979 10.0654872 10.4333908 10.0159314 14.4682649 10.6628869 10.8184767 2.6991740 12.7969150 2.3512326 10.3316410 6.5922492 8.3675436 10.1973019 12.8744472 1.2950765 14.1600231 4.5642379 9.6706593 10.4866013 8.8705207 1.4767964 12.9942132 10.6060556 0.4767446 8.2603165 7.3594157 NA 4.8225466 9.0172235 9.8151376 9.2744341 10.4050442 7.7956923 10.4430377 4.4767705 10.5892121 14.5733505 5.9512078 11.3773879 10.9736264 10.5455509 4.6731720 6.9086184 8.3756260 10.9491250 -0.1081142 11.2817103 5.6862260 6.1206298 4.5356673 10.5129462 11.5965783 10.6931143 12.1340911 12.3567387 8.8401774 11.1450667 10.1806763 11.0146381 10.7059920 3.3512467 11.6355927 9.7552221 1.4767964 10.5124881 8.6566816 3.6991629 5.6332772 10.3538011 9.7239090 9.9692934 9.5686487 3.0617416 9.3916560 12.2134564 11.6957394 8.2711885 10.1176201 0.0090312 0.0090312 0.0090312 -0.6713100 0.0111210 0.0075000 -0.1110400 0.0041632 -0.6712200 0.0069435 0.0069435 0.0069435 -0.1131200 -0.1131200 -0.1137700 -0.1043400 -0.1043400 0.0102000 0.0181030 0.0070826 0.0061090 -0.0128510 -0.6659600 0.0335490 0.0335490 -0.0024938 -0.0024938 -0.0024938 0.0000000 -0.0036537 0.0090312 -0.1073600 -0.6713100 0.0075000 0.0075000 -0.1025000 -0.7598600 0.0041632 -0.6712200 -0.6712200 0.0090312 0.0090312 0.0069435 -0.1400000 -0.1400000 -0.1400000 -0.1400000 -0.1131200 -0.1131200 -0.1137700 -0.1043400 -0.1098300 -0.1143800 0.0102000 0.0181030 0.0181030 0.0070826 0.0061090 -0.0128510 0.0076392 -0.6659600 0.0335490 -0.1081100 -0.0024938 -0.0024938 0.0000000 0.0029133 -0.1082800 -0.113 -0.113 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 -0.654 -0.654 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 -0.102 -0.113 -0.113 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 -0.654 -0.654 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 -0.102 9.1829807 14.3741139 7.3306023 10.2510106 3.5855755 11.2185205 3.5922537 NA 8.5101957 8.9169498 -1.1081142 8.1230314 2.0617416 10.6000318 9.1049143 2.7986934 8.6315907 9.1748985 7.2046934 11.6237655 9.8370126 6.9686253 11.6195179 0.4767446 8.6927100 9.6862260 4.5922477 NA 10.8619160 2.3512326 13.8108131 12.9304719 9.1503761 10.1597672 10.6599945 9.6690654 2.7986934 1.4767964 1.2137516 5.1206298 9.0754455 11.4734815 9.9937857 5.7246994 7.6502002 7.6991650 9.9964089 5.2137400 9.2980151 NA 11.1143032 1.8918080 5.1585956 9.7708725 6.6511651 4.1397396 9.5756820 8.7055913 9.8143945 NA 14.2630423 1.4767964 11.4914906 -1.1081142 7.9950978 6.1772122 8.1230314 9.2148648 13.0305819 6.1397376 8.6780797 12.7969150 10.6854135 10.3624690 12.8744472 12.0928619 8.6180283 10.2143016 12.6882554 9.8995382 8.3756260 9.1121885 0.4767446 7.1158115 10.8221779 11.2934896 5.1397396 9.0988246 9.3614519 7.5571458 10.1220648 7.3956361 9.6805285 10.6628869 8.1444757 5.1397396 6.3916560 6.5651539 11.0088038 10.3096627 7.6197307 10.2349958 9.4701828 6.2841273 11.2691589 9.2744341 11.4611911 10.0313614 10.5320551 9.5129462 10.4678220 8.2646753 0.4767446 9.6539347 6.3916560 11.2817103 7.8748037 11.1603521 10.5129462 7.2493619 14.1029379 11.2419205 10.2792890 12.1398859 10.8872240 8.8532600 2.2137516 TCGA-BH-A0HB 55 0 NA 806 breast stage ia t1c n0 (i-) m0 female 2008 NA NA infiltrating ductal carcinoma 0 white NA 3 1 5 1 NA NA 1 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 8.5796633 9.1231589 11.9078892 7.8635848 8.3216693 8.9102215 10.1513399 10.1299482 9.5468318 14.5164777 10.8717086 10.9091455 3.0232731 12.4969755 1.9357992 9.5633408 6.8900028 8.0804653 9.3756379 13.4911750 -0.5282403 13.8168253 2.1057451 9.2765250 11.3462583 9.3494349 2.1057451 10.4386387 11.2961054 0.5207491 8.5886521 7.5760519 3.5207742 3.4593660 9.0059279 10.1144718 9.8471989 10.1640243 8.9414315 10.7718573 -1.0643140 11.6757985 14.2062118 6.8537163 10.2605501 10.3813392 11.2212092 2.6362418 7.4236471 8.4256548 10.1831411 -1.0643140 10.8746514 9.9145174 5.8061719 4.5796629 9.4730254 12.1869934 10.4450871 11.4301625 12.6323399 9.0059279 11.4112870 10.4769035 10.9301604 10.8997867 3.6362418 11.4140710 12.0901504 3.8426973 10.0099484 9.4932706 2.5219804 5.1452617 10.3205907 9.2966540 10.1513399 10.1088593 1.9357992 9.3641671 11.5277967 11.1069837 9.8291084 9.7781573 0.02398700 0.02398700 -0.66809000 0.00249690 -0.01807800 -0.00097017 0.00666530 -0.01684100 -0.63906000 0.58973000 0.84731000 1.51030000 0.05039200 0.00308000 0.69746000 0.06036500 -0.65678000 -0.63083000 0.01950300 -0.64217000 0.04925600 -0.06168900 -0.65957000 -0.52940000 3.65690000 0.06847900 0.03327600 0.03327600 0.59332000 0.04103400 0.02398700 -0.00456950 0.00249690 0.02525000 0.01768400 0.00666530 0.01922300 -0.69133000 -0.64565000 -1.29290000 -0.01766600 0.46314000 -0.47173000 -0.00857660 -0.00857660 -0.00857660 -0.02267600 0.00308000 0.50186000 -0.58215000 0.69708000 -0.65678000 -0.65678000 -0.63083000 0.01950300 0.01000600 -0.64217000 0.02707600 -0.11587000 -0.20622000 -0.65957000 -0.52940000 0.67085000 0.02174400 0.03327600 -0.65389000 0.02454800 -0.63301000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.118 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.118 1.506 0.000 0.000 0.000 0.000 8.73508853 12.10885938 7.26672377 8.64316606 3.88999913 10.66032077 1.52074910 NA 8.84570017 8.07791376 NA 6.88417418 3.18374057 11.02260660 9.19907625 2.52077424 8.07535827 9.08935884 9.62405720 11.02658098 8.74290425 6.71059432 10.10948410 -0.06416313 6.85467019 9.51700753 4.32812557 NA 10.39164787 1.52074910 12.78442988 12.59947623 7.51323569 9.59044296 8.53199662 10.33455062 4.06508972 2.63624178 NA 3.18374057 8.85467019 10.55923119 10.88271320 3.57966290 8.25380731 7.52826421 10.05669285 6.05474865 9.64747390 -1.06431396 10.67432143 3.18374057 2.74317025 9.81734921 6.82916965 4.95817452 8.73670667 8.39933134 9.88782012 7.02326977 14.02844021 -0.06416313 11.02260660 0.93583687 8.49422758 4.18373263 8.45936891 8.23272311 13.588682 5.991089 8.451507 12.496976 9.541286 9.763943 13.491175 12.458388 8.421636 9.515123 12.540708 10.435155 8.425655 8.556027 2.395227 9.040406 11.165827 10.890730 6.878322 9.609116 9.433659 7.115716 10.426943 6.913087 8.275657 10.871709 7.486553 3.183741 5.622307 8.270170 9.713062 10.199076 9.243008 9.467188 9.495184 6.154976 10.996601 9.847199 10.934397 10.104479 7.684000 9.556943 10.385471 8.164625 3.395241 8.456465 6.239587 10.874651 5.755985 10.257171 9.473025 7.159809 13.824836 10.967853 9.935807 11.265603 10.973697 9.058635 1.257735 TCGA-BH-A0HF 77 0 NA 727 breast stage ia t1c n0 (i-) m0 female 2008 NA NA infiltrating ductal carcinoma 0 white NA 5 2 NA 3 NA NA 3 4 4 4 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 1.827622e-05 1.005712e-05 9.4830424 9.4128334 11.8356598 9.1118162 8.6287200 9.0474206 10.5261245 10.2185647 10.8314165 14.2176505 10.8092922 10.7176204 2.9266447 12.4317601 1.8391937 10.2685930 4.8391887 8.3568556 9.7610272 12.6357329 0.8391534 13.2241723 6.1879142 9.8483990 10.2748565 7.2357912 NA 9.8643258 11.2022259 3.7460762 8.0607732 8.6815368 6.0091120 3.7460762 9.3754335 10.4428126 9.6823222 11.2769384 9.4080924 11.0707075 5.9266494 10.9349130 14.9835856 7.3085429 9.6625536 10.8285808 10.9545551 4.4830418 6.6205454 8.7948363 11.9439488 2.0090963 11.2096012 5.0290111 5.6593652 5.6971678 9.9946370 11.6742498 9.6987210 12.2562476 12.4801090 7.7787658 10.9914711 10.5346104 11.2306984 10.9675029 3.5940708 11.8586033 10.0619812 1.4241696 10.3573477 8.9838444 1.6486035 4.3627504 10.6193159 9.3430120 10.0320955 9.1452479 3.4241428 8.7743512 12.5777008 11.7533845 9.8566907 10.0541125 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8532066 13.6446783 4.9052739 9.7662234 2.9668180 11.0924429 0.8391534 1.4241696 8.8849459 8.8587771 1.4241696 7.9371396 3.8391836 10.4789792 9.0835501 2.7460762 9.0559320 9.0535054 9.7286903 10.4339774 9.4825916 7.1923333 11.3940149 2.0090963 9.2196472 10.3113694 4.6720745 2.0090963 10.5226196 3.5396303 13.0332506 12.4697947 8.9052754 10.3189665 8.3802827 9.6057153 4.1611137 3.1611137 -1.1606853 5.9052763 8.3469808 10.3235057 10.5974095 5.4241495 7.5277163 6.4390995 10.3573477 5.7580499 10.0781880 1.1611137 11.9748956 3.9266447 4.2315015 9.8449722 6.0170043 5.6336027 9.4538961 8.3310392 8.5448188 8.3250158 13.8840073 -0.1608466 10.9911542 -1.1606853 8.1565989 6.6971678 7.9079644 8.6689091 13.613253 5.179037 8.344998 12.431760 9.575588 10.554290 12.635733 12.051075 8.914666 10.499628 13.010910 10.233113 8.794836 8.891754 NA 7.766964 10.743445 11.292971 6.963308 9.284201 8.590730 7.630349 10.127124 6.424149 7.891755 10.809292 7.889035 4.672075 6.346982 7.396458 11.124588 9.793383 7.536710 8.846213 11.825206 6.323003 10.613936 9.682322 10.278498 9.524811 11.070107 9.965891 10.602399 8.969757 2.161114 8.599124 6.775824 11.209601 7.976177 10.557291 9.994637 6.916002 14.239198 10.634008 10.682322 12.368129 9.963954 8.990203 2.424143 TCGA-BH-A0HI 78 0 NA 620 breast stage ia t1c n0 (i-) m0 female 2008 NA NA infiltrating ductal carcinoma 0 white NA 5 5 2 3 NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 10.0415087 8.9444465 11.9141387 9.0921181 8.4608720 8.9900571 10.7240266 9.6052963 9.9547076 13.3962284 11.4462199 10.4540168 -1.5079930 12.8944180 3.0771746 10.0463145 6.8930843 7.8585275 9.6820298 13.5263595 0.4922121 13.8410372 6.7868263 9.9753611 10.6137389 7.3839893 -1.5079930 11.4120594 11.8039537 1.8141402 7.2963363 6.6419520 -0.5077879 5.0620613 9.7537127 10.1765156 10.8783373 10.9260515 10.0318488 11.0724639 -0.5077879 11.3911846 14.8490871 7.9253734 9.9142702 11.5809936 10.9278756 3.7776091 4.2470920 8.7077384 12.3995655 1.4922121 11.1301887 4.3990959 5.3123856 4.3748517 10.7451664 11.5372824 10.5183830 11.7804947 12.6822615 8.3610279 10.6661947 10.2797366 11.4516640 10.5945092 4.3501860 11.9751393 9.9699636 NA 10.2890561 8.8541490 1.6621143 4.8320545 10.7419114 9.9885599 9.7430958 9.4572682 2.1926361 10.4207238 13.0340280 12.1686032 10.0029695 9.5556005 -0.01243800 0.75586000 0.76230000 0.10877000 0.10877000 -0.10697000 0.00166420 -0.00719580 -0.00719580 0.00180300 0.00180300 0.00180300 -0.00705760 -0.00705760 -0.00519070 -0.00519070 -0.00519070 0.00750000 0.00422870 0.00013863 0.11521000 0.09449100 -0.02288100 -0.02288100 -0.02288100 -0.01739100 -0.01739100 -0.01739100 0.11111000 -0.01243800 -0.01243800 -0.00526100 0.10877000 -0.10697000 -0.10697000 0.00166420 -0.78752000 -0.00719580 -0.00719580 -0.00719580 0.14043000 0.10745000 0.00180300 -0.00553750 -0.00553750 -0.00553750 -0.00553750 -0.00705760 -0.00705760 -0.00392700 -0.00519070 0.00124810 0.00124810 0.00750000 0.00422870 0.00422870 0.00013863 0.11521000 0.09449100 -0.66689000 -0.02288100 -0.02288100 -0.10972000 -0.01739100 -0.01739100 0.11111000 -0.01092200 -0.02013800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 8.2184237 13.3908068 4.6621314 9.6072489 0.8567865 10.7077384 1.8141402 -1.5079930 8.2636950 8.7077384 -0.5077879 7.2374088 0.8140992 10.4325189 9.2620432 1.2995377 6.0620613 9.2898670 11.9247473 10.9320362 9.9757642 7.3687221 11.8841202 3.7776091 8.9890592 9.7902678 4.1360601 NA 10.4129304 1.8141402 12.9954721 12.6303171 8.8118775 10.3139793 8.1179142 9.3091889 3.7776091 1.4922121 NA 4.2735681 8.8320555 10.4812449 11.0352372 3.4921993 8.1215439 6.4922057 10.4358191 6.6520763 9.5420539 -1.5079930 12.7144720 3.8141300 5.9598119 9.2024177 6.6120797 1.0771746 9.2562476 7.1142577 7.4140467 1.4922121 13.9257908 0.4922121 10.1032301 NA 8.6470234 6.5366000 7.6646329 9.2328293 13.480388 3.884520 8.689422 12.894418 10.278475 11.063010 13.526359 12.286621 9.355548 10.511101 13.317512 10.186128 8.707738 8.791413 -1.507993 7.555601 11.524251 10.9623558 7.2302972 9.0809201 8.8508566 8.2252378 10.2432012 6.7162076 8.6072489 11.4462199 6.4110686 3.2995670 4.1360601 5.9494229 10.3560045 9.9485598 8.1378636 8.8585275 12.4672472 3.1926518 10.5996317 10.8783373 10.6336740 10.0897923 10.8890777 10.0501477 10.5977866 9.2260680 NA 9.4893637 3.7016599 11.1301887 7.7089514 10.5214926 10.7451664 6.8759090 13.6737071 10.5259724 10.7882612 13.2230469 10.2821465 8.7971271 -0.5077879 TCGA-BH-A0HK 81 0 NA 178 breast stage iib t2 n1 m0 female 2010 NA NA infiltrating ductal carcinoma 2 white NA 8 2 2 2 3 5 3 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.115464e-06 9.01673e-07 9.8136122 9.6396696 11.9780836 9.1550049 8.0670417 9.0909352 10.1702575 9.8000339 10.8038657 13.0332569 12.1540044 10.4209253 1.3974744 13.0428363 3.0755155 8.5793457 4.8828729 8.2252672 9.6243418 13.0011672 NA 14.4789648 7.7514771 9.2360343 9.8820697 4.8828729 NA 8.7602685 8.7301559 1.3974744 7.4242478 7.8828747 4.3609191 5.7897658 9.2009334 10.7341778 8.9913994 10.4153701 9.9596905 11.0036682 2.2454348 11.9080145 14.5017848 7.2548321 9.4859714 11.2096254 11.1732230 4.8568811 -0.9243989 9.0062573 11.3884029 NA 11.2211338 4.8304075 4.7193751 3.7759566 10.7602686 12.6238603 10.3758725 11.5613493 12.6798416 6.9147236 11.0209638 10.6224338 11.1837177 11.1623197 4.3234493 12.0576223 12.4451174 NA 9.8756110 8.9052429 2.9881757 5.0527984 10.3912356 10.3417210 10.3528074 9.1801188 3.3234421 10.8178295 12.7420769 12.0504723 10.1368912 9.7381884 1.39710000 1.88930000 1.92860000 -0.00097017 -0.01798700 0.00036127 0.04349900 -0.01188700 -0.01188700 -0.77922000 -0.01133500 0.01042400 0.00819590 0.00819590 0.01084200 2.08150000 0.01321300 0.01614600 -0.00794220 -0.00659850 0.02567100 0.01914300 0.00374650 0.00374650 0.00374650 0.00624810 0.00624810 0.00624810 0.03059100 0.01148300 -0.01505400 -0.01329600 -0.00097017 0.00036127 0.00430210 0.00674280 0.00674280 -0.01188700 -0.01188700 -0.01316100 -0.00774820 0.01516800 -0.76903000 0.01098200 0.01098200 0.01098200 0.01098200 0.00819590 0.04174100 0.01084200 0.66919000 -0.76523000 -0.76523000 -0.01422900 -0.00794220 -0.00794220 -0.00659850 0.02567100 0.01391800 -0.74985000 -0.75685000 0.00374650 -0.01546600 0.00364690 0.00624810 0.03059100 0.00666530 0.03552400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 0.000 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 0.000 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 0.000 8.26287191 11.74130004 2.53495803 10.12468794 3.32344213 11.05065147 1.88287777 0.66047231 8.84204889 6.83040746 NA 8.40327454 5.11991223 9.90365654 9.37014074 0.07546417 10.77769266 9.42645913 11.18502425 9.66235987 9.70131097 6.95203647 11.48914791 2.07553263 8.89888733 10.45273050 4.93350182 NA 10.35860835 3.77595655 13.58498576 12.16049444 8.30193237 10.90959597 8.17618213 9.43636717 1.07553263 0.07546417 -0.92439892 2.24543481 8.19705349 10.09788781 12.40096603 7.02388739 7.39771827 6.48491149 9.79062398 6.51846275 9.75147711 0.07546417 12.51405199 3.16298339 4.28497305 9.92412736 7.44712208 7.18404419 9.11031887 9.63585286 8.85195294 7.26039551 14.83220662 1.39747442 9.96350216 NA 7.95510353 6.63010837 8.13351164 9.22145227 14.563390 4.908409 8.257914 13.042836 10.659543 11.434446 13.001167 12.441842 8.856880 10.433622 13.415787 12.285430 9.006257 5.675432 NA 7.318694 11.197701 10.755880 4.690227 8.553278 8.270277 7.927269 10.191864 5.945884 6.162983 12.154004 7.489148 2.534958 7.029717 6.238516 10.544144 10.406437 8.297107 7.800034 10.477466 5.970338 11.863798 8.991399 10.767700 10.651532 10.699402 10.202870 10.828737 8.828737 NA 8.205782 7.472125 11.221134 5.323446 10.881776 10.760269 6.796620 15.073978 10.324041 10.931946 11.848247 10.314522 9.568375 3.719381 TCGA-BH-A0HL 56 0 NA 72 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 2 white NA NA NA NA NA 3 5 1 1 3 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 10.5006569 10.5491578 12.0146470 9.8090090 8.6083406 7.3803883 10.4624897 9.8709124 8.9347008 14.2741793 11.6615856 10.8782944 -0.7360041 13.0237768 3.5859720 9.4716691 7.1558281 8.0905931 7.0421223 12.9933467 5.1709345 13.7736341 4.6038933 9.6092004 10.6442351 5.5678253 -0.1510416 6.2413254 9.0097189 -0.7360041 7.0322287 8.5870994 -1.7360041 4.2640409 10.1216370 9.3233892 10.2562749 8.3959017 10.1060021 10.9761417 1.0714195 9.8732234 14.8734110 9.0927524 11.3436961 11.9628578 11.3733856 7.1436281 2.6563591 8.8490072 8.9355856 -1.7360041 10.6826879 2.8489984 -0.7360041 3.7234712 9.6044511 11.7556473 10.5066234 11.8912365 12.6088260 8.5678253 10.3826613 10.8480676 11.0927762 11.6776726 5.5586656 11.9313780 12.9776996 -0.1510416 10.1313234 8.9557882 6.6084293 2.5859720 9.9249320 10.4624897 10.5896312 9.0021368 7.1799240 4.1947805 10.9013487 9.7563985 10.3959016 9.9355857 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.7558984 11.1966285 3.6563591 10.4003950 2.4936217 11.1061985 -0.1510416 NA 8.5575162 6.3725691 3.4735012 5.9856234 1.2640560 10.1417122 9.1701837 4.9364683 4.9505431 9.5226108 11.2507756 10.5480011 10.2841530 8.0969349 10.9921777 0.5860201 10.6055635 9.6850575 -1.7360041 1.0714195 11.0445844 3.8186359 11.1724373 12.0336759 7.2036240 10.9072244 8.1724375 9.6887358 7.2724730 2.0713851 -0.1510416 1.2640560 9.1413288 10.1851418 9.3172919 1.2640560 9.9365496 7.0810285 10.3534951 4.7069891 9.4458181 -1.7360041 9.3521704 3.1709345 4.8787548 9.4608558 6.6023351 -1.7360041 8.3647068 7.0355337 8.5471328 NA 12.9432498 -0.7360041 10.9983308 NA 7.6038948 7.5859728 7.9133005 9.1776821 15.552961 6.922256 8.536675 13.023777 10.403276 10.668122 12.993347 13.567076 11.776105 10.749371 12.067268 10.471974 8.849007 8.517892 3.018937 7.173938 12.321106 10.9993891 8.9808642 8.1079656 9.7316501 9.3640499 10.5494295 3.6215948 10.2058259 11.6615856 6.9293803 0.2639959 8.2124118 8.5510530 9.6050074 10.1126676 6.4389698 9.8667436 9.8138293 -0.1510416 11.5805101 10.2562749 9.3314791 10.4823052 12.0251803 9.1527878 10.5746574 8.2413244 -0.7360041 8.5825989 0.2639959 10.6826879 9.3627348 12.1998755 9.6044511 7.0685633 13.3008622 10.2156936 9.1940427 12.2396240 10.1157937 9.9718351 NA TCGA-BH-A0HN 67 0 NA 516 breast stage ia t1c n0 (i-) m0 female 2009 NA NA infiltrating ductal carcinoma 0 white NA NA NA NA 3 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 10.24368895 8.27764960 11.23228649 6.32686268 8.18605678 8.75558030 10.66671284 8.69382459 10.14921986 13.08109853 10.70613552 9.55896191 2.29124991 13.52563722 1.55429414 7.82417912 7.96931054 7.64879113 10.72336316 13.55585741 1.77665148 14.23056098 3.92351052 10.20950588 11.07390958 9.39347712 0.96930708 9.12159568 12.22787684 2.87619276 7.48894715 5.09859220 NA 1.77665148 9.80220081 8.82417912 9.60502886 9.89782912 9.25471308 10.99652567 13.74172847 10.90852270 13.89375219 6.01370567 10.17571471 10.44200160 10.22964235 4.90005046 -1.03061924 7.68698718 9.14548386 NA 10.24834092 1.29124991 4.29124254 3.42874540 9.86942281 11.82729181 10.16652754 10.73044645 12.16852302 9.46716269 10.51427526 10.32137627 10.17327050 10.33344543 4.25471497 12.60932972 11.54106345 NA 10.75925189 8.62573551 4.25508524 4.32686088 10.42823003 9.06338861 10.11141779 8.93220678 -0.03061924 8.57108176 12.36885577 11.69829415 10.65054917 9.29123886 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.95230444 11.60819918 2.42873200 9.25124072 NA 10.61856693 -1.03061924 NA 8.91913744 8.87319277 NA 4.52390064 1.29124991 9.95444120 9.80299158 3.55426958 3.36162801 9.29123886 12.88649636 12.02916221 9.00951822 7.73086205 9.04211324 2.87619276 9.72085490 9.65756105 4.13923208 NA 10.58998880 2.77667253 12.60706774 11.93689731 5.41225312 8.93653695 8.46516599 10.29067529 2.55426958 NA 0.55424502 7.54295833 9.68784367 11.07946778 10.60366807 -0.03061924 10.44737256 8.38293868 10.10437873 5.30916163 8.81949767 NA 11.74697708 NA 3.29123518 10.16377834 6.74791368 NA 8.10116785 5.62752221 4.75067081 -1.03061924 13.61389942 NA 10.91731292 NA 7.63108900 4.87620259 8.27992346 9.81636819 13.05633765 5.17876244 8.71246234 13.52563722 9.80615019 11.32052614 13.55585741 11.22787684 8.11231126 9.38293868 12.76788384 8.71918036 7.68698718 8.43079040 -0.03061924 7.23140553 10.15851767 11.27992358 6.08825186 8.23375340 9.03270588 7.03000715 10.39392850 6.99167829 7.64526790 10.70613552 6.71077751 3.87620259 10.03203153 7.18944704 7.22669829 10.62573569 7.78629446 9.33781722 7.68011756 2.42873200 12.12476153 9.60502886 11.00822978 10.48845556 10.91219177 8.85042471 10.70147819 6.66279795 NA 9.60942920 -0.03061924 10.24834092 2.87619276 11.51427521 9.86942281 6.04612650 13.75404787 9.85271785 10.03741723 11.63797420 10.41536024 10.13672894 -0.03061924 TCGA-BH-A0HO 48 0 NA 76 breast stage iia t1c n1a m0 female 2009 NA NA infiltrating ductal carcinoma 1 white NA 5 5 2 NA NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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10.581959 9.608857 2.499808 5.035861 12.832797 11.182804 9.555092 9.007605 0.00110930 0.62428000 0.63865000 -0.00401620 -0.00401620 -0.01326400 0.00694350 -0.00925970 -0.01491600 0.00180300 0.00180300 -0.00055444 0.00597000 0.00597000 0.00000000 0.00000000 0.00000000 -0.00526100 -0.00526100 -0.00415460 0.00332990 0.01209700 0.00597000 0.00597000 0.00597000 0.00264650 0.00541390 0.00541390 0.01419000 0.00110930 0.00110930 -0.00774820 -0.00401620 0.00194180 -0.00762070 -0.00475630 -0.00475630 -0.00925970 -0.02069400 -0.00553750 -0.00512270 0.00291330 0.00180300 0.00750000 0.00750000 0.00750000 0.00750000 0.00597000 0.00597000 0.00000000 0.00000000 0.00000000 0.00000000 -0.00526100 -0.00235530 -0.00235530 -0.00981850 0.00332990 0.01487200 -0.67417000 0.00597000 0.00597000 0.00694350 0.00264650 0.00541390 0.01419000 -0.00180140 0.01223700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1722350 12.0114637 1.6373320 9.1835064 3.3071662 10.1505026 0.9852089 -1.8221460 8.4388014 7.7534207 -1.8221460 6.7379476 0.9852089 10.5403735 8.8599984 NA 7.5978418 9.6197884 10.9976617 11.6366728 10.2741983 7.6434478 10.8509699 5.3377539 9.0028403 9.6290928 8.1436659 NA 10.6822041 2.1778859 13.1402355 12.6941358 7.8661322 10.5474790 10.1971249 9.3615170 -0.8221460 0.7628165 -1.8221460 2.0847786 9.0795029 11.6749851 10.4115015 2.7628378 6.3726387 6.6935817 10.3078086 5.3276299 9.7353455 NA 12.5069773 2.5701957 9.8049596 9.5858876 7.0034133 0.4997821 9.3352287 7.9836258 9.6046705 -0.8221460 14.0785127 1.8783330 10.2078591 NA 8.5110371 5.8360933 7.6187511 9.4180767 13.894917 4.604148 9.098235 12.549931 10.186923 11.240097 13.286161 13.411127 9.284739 10.511037 13.070709 11.302003 8.390986 9.714129 -1.822146 7.078749 10.576893 10.5354337 6.1262481 8.5321311 8.4896300 8.4560525 9.6303598 7.3553009 7.0666253 11.5888630 4.4066999 6.8396598 7.3071644 6.3203980 9.7939710 9.7180098 9.1465341 9.0028403 13.1709970 4.2439737 10.1451728 11.2977955 10.5946793 9.9868459 11.1889342 9.1988617 10.6280620 9.2877124 -1.8221460 9.9553343 3.5701957 11.2979575 7.4470088 10.3116661 10.9075025 7.1639797 14.5624790 10.8713687 10.3710990 12.7939136 9.2147422 9.4621274 -0.2371835 TCGA-BH-A0HP 65 0 NA 414 breast stage iiia t3 n2a m0 female 2009 NA NA infiltrating lobular carcinoma 8 white NA 5 2 2 3 2 2 3 3 2 4 NA NA 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 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9.92481057 4.31867114 11.17263752 13.45773025 13.43870286 10.24406099 9.70377106 0.02749700 0.53590000 0.54506000 -0.00180140 -0.00180140 -0.00940460 0.51490000 -0.00152430 -0.00152430 0.00041593 0.00041593 0.00041593 0.01544700 0.52258000 0.02034300 0.02034300 0.02034300 0.00736090 0.00736090 -0.00478840 0.01153900 -0.42243000 -0.47382000 -0.47382000 -0.47382000 0.05637000 0.05637000 0.05637000 0.03951900 0.02749700 0.02749700 0.00000000 -0.00180140 -0.00940460 -0.00940460 -0.00055444 -0.00055444 -0.00152430 -0.00152430 -0.00152430 0.51821000 0.00110930 0.00041593 0.00473220 0.00473220 0.02346000 0.06813300 -0.51918000 0.01572700 0.02034300 0.02034300 -0.50846000 -0.50846000 0.00736090 0.00736090 0.00736090 -0.00478840 0.01153900 -0.42243000 -0.46802000 -0.47382000 -0.47382000 0.00754420 0.05637000 0.05637000 0.03951900 -0.00791160 0.06537000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.79910609 12.96119165 8.60765174 10.08215423 1.98975665 11.09876397 -0.63553963 -0.05050242 8.33170387 8.84324743 -0.63553963 8.74372600 3.22246455 10.53220951 9.08386648 0.36446037 9.64176511 9.69651431 12.49569167 9.08728541 9.26814124 7.56415025 10.86507069 3.40887487 10.55615386 9.67679348 4.36447438 -0.05050242 10.30185157 4.43056629 12.78272569 12.16881049 8.68075931 10.39583432 9.10425828 9.20604219 4.64987983 1.17184731 -0.05050242 3.82391237 8.69875119 9.43661036 10.95295814 6.84425759 8.12489830 6.82390982 9.79179063 6.14583842 9.22401253 NA 11.36289190 1.94942287 5.41976135 10.27326818 5.78612061 4.00833449 9.50594629 8.39790091 7.36165696 -1.63531552 14.27350358 -1.63531552 9.85783283 NA 7.17825850 6.23484233 7.88607819 8.71099132 12.519370 4.903636 8.919067 12.593522 10.475669 10.916186 13.158894 10.713759 9.419082 10.814400 13.038008 10.491505 9.313575 8.372906 -1.635316 6.926721 10.734620 11.40236783 7.35883139 9.36377317 9.20289395 7.50402921 10.28920116 7.37849862 7.11936552 11.35776999 6.47821953 0.68643329 4.91906830 6.06227933 11.07958178 10.22905083 7.67962718 8.08043969 12.31110994 5.47300107 10.98252826 9.21153500 10.62598503 9.82595715 11.09706920 10.38615177 10.65737455 8.57149214 -0.63553963 9.36873343 5.20996797 10.55584548 6.64524916 10.18085747 10.73243847 7.08899171 14.70122837 10.18864101 10.30001112 12.31001303 10.63943821 9.64408826 -0.05050242 TCGA-BH-A0HQ 56 0 NA 1121 breast stage iia t2 n0 (i+) m0 female 2007 NA NA infiltrating ductal carcinoma 0 white NA 5 2 3 NA NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 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10.2837820 9.2452656 4.3102965 4.4623010 11.3889297 10.3054848 10.3779974 10.0509390 3.8475861 10.8021509 12.9932844 11.8875382 10.4174466 9.5686902 -0.05135800 1.19180000 1.28490000 -0.04879000 -0.03640100 -0.02001300 0.17148000 0.34399000 0.35082000 0.59075000 0.59075000 0.59291000 0.03760100 -0.02853300 -0.00134180 0.04363600 -0.02132200 0.01812000 -0.04851900 0.48307000 -0.01908200 -0.05715700 0.32558000 0.32558000 0.32558000 0.29385000 0.37461000 0.32542000 0.37542000 -0.02210000 -0.01003900 -0.06052100 -0.04391500 -0.02388200 -0.05661800 0.16992000 0.14935000 0.34059000 0.40369000 0.40822000 0.29480000 0.33108000 0.64140000 -0.02317600 -0.01509600 -0.01509600 0.01526500 -0.05594400 0.00065085 0.01163600 0.03519700 -0.02458500 -0.01509600 -0.02374500 -0.00065553 0.00142580 0.43053000 -0.02225100 -0.01082900 -0.45118000 0.32558000 0.32558000 -0.05500100 0.29035000 0.28591000 0.33669000 0.40601000 -0.35050000 0.000 0.000 0.000 0.000 0.000 0.000 0.455 0.000 0.000 0.523 -0.381 0.326 0.326 0.000 0.000 0.325 0.325 0.000 1.336 0.352 0.352 0.368 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.379 0.379 0.331 0.331 0.626 0.626 0.000 0.000 0.131 0.131 0.000 0.000 0.000 0.000 0.000 0.000 0.455 0.000 0.000 0.523 -0.381 0.326 0.326 0.000 0.000 0.325 0.325 0.000 1.336 0.352 0.352 0.368 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.379 0.379 0.331 0.331 0.626 0.626 0.000 0.000 0.131 0.131 8.3828665 13.7662214 8.0374157 10.2339924 3.0159079 11.4294977 0.8475961 0.8475961 8.6468726 7.9922495 0.8475961 8.1167177 2.7544814 10.1467990 9.4002602 1.6549396 8.7604804 9.5488974 11.6472774 11.0515507 9.4528297 7.5058028 10.9032124 2.8475961 9.4678109 9.8155378 3.6024806 -0.1524841 11.0367979 2.7544814 12.4049350 12.0883824 7.6091425 10.4632207 6.8532160 9.7332874 5.2399097 NA 0.4325319 9.1661340 9.5340916 9.4732999 10.1120336 4.8017898 8.9371872 6.8305849 10.5204583 5.8810136 9.2759513 0.4325319 11.5701851 1.6549396 4.0955194 9.9306115 6.0116924 3.3711546 9.5102594 7.4136449 6.4250195 0.8475961 13.6038346 0.4325319 10.2858630 0.8475961 8.8032409 5.2226307 7.7514731 9.0200185 12.7075547 4.9350542 8.4155470 13.7991945 10.1835396 11.1604740 13.0419631 12.5101481 9.0139800 10.5031217 12.9128388 9.8119319 8.8947150 11.4486653 -0.1524841 6.9136805 11.5369339 11.270970 6.057045 8.675727 9.256982 8.565267 10.602149 6.248470 6.945623 10.564839 5.561836 4.869960 7.331407 6.674648 11.657761 10.265444 8.736334 8.482402 11.874979 5.132992 9.987257 10.307023 10.141637 10.043578 11.440515 10.075808 10.999559 9.212820 -1.152324 9.814176 5.386749 10.473300 7.428791 10.248470 10.559688 7.256982 13.882562 9.893351 10.212273 13.026956 11.015323 9.819135 1.432532 TCGA-BH-A0HU 52 0 NA 392 breast stage ia t1c n0 (i-) m0 female 2009 NA NA infiltrating ductal carcinoma 0 white NA 6 3 3 NA 3 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 10.26988746 9.45810820 10.94023239 7.05610768 8.96105431 9.21954173 9.94491290 9.59165848 9.65075325 13.21133526 10.77021483 10.32799560 0.01178186 12.80836206 2.88617943 9.90147153 4.55603696 8.24693057 10.31244793 12.89887116 3.88617943 13.31734831 6.23410656 9.88874249 11.32043227 3.98134123 2.33365271 9.85981522 10.96615270 1.23413340 7.86346276 6.84037889 NA 2.95031910 8.54309564 9.84618504 8.94737014 10.25964159 9.68531752 10.83826250 1.42674781 11.65120546 14.38743227 8.14000046 9.30556886 10.13583534 10.54309544 4.93454481 1.59669666 8.94737014 10.65827272 -1.57303755 10.49854907 4.18163531 4.73053127 4.40403114 7.56630297 12.11805884 10.96712176 11.07218480 12.36568784 8.78540277 10.22035487 9.56310187 10.93305908 10.44564715 3.23410273 11.79334693 10.19245200 2.12720404 10.23892882 9.88720736 4.59947848 3.78430505 10.93256305 9.21872838 10.35785832 10.26280192 3.55603696 6.73963481 11.90653179 11.01640265 10.22967167 10.79525800 0.0975490 0.7658100 0.7355000 -0.3479000 0.8170900 -0.2130400 0.0592290 0.0771480 0.0318650 -0.7272900 0.7759900 0.7463300 0.1844900 0.0624870 0.0759970 0.1096500 -0.5852900 -0.1613000 0.0000000 -0.7339800 0.0057414 -0.7160400 -0.6559300 0.1042500 0.1042500 -0.0332630 -0.0332630 -0.0332630 0.1305200 -0.6938200 -0.7333600 -0.3255300 -0.3479000 -0.5911600 -0.3152900 0.0592290 0.0592290 0.0771480 0.0304320 0.0318650 -0.0936620 0.0428800 -1.0290000 0.0608000 0.0608000 0.0608000 0.1734000 0.0624870 0.0845040 0.0721150 0.1096500 -0.7366100 -0.7311700 -0.0127070 0.0000000 0.0000000 -0.7339800 -0.0514460 -0.7160400 -0.7018100 -0.6559300 0.1042500 -0.7211900 -0.7033400 -0.0332630 0.0909430 -0.7124700 -0.6948600 0.138 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 -0.316 0.138 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 -0.316 7.56630297 13.11653116 5.27223973 9.14013803 1.01171031 11.66291524 -1.57303755 NA 9.84354911 7.07420998 2.81907545 7.88002242 3.55603696 10.27302545 9.87950759 4.59667877 6.10623105 9.54504381 7.43237570 10.72996150 9.24993568 7.77989857 10.28084070 -0.57325219 10.20195027 9.54893247 3.59667281 0.01178186 10.17578293 1.74867590 12.56502332 12.28638336 6.83614253 9.18747159 8.42251853 10.28356612 4.55603696 1.74867590 -0.57325219 5.16821680 9.29325782 9.79634889 10.98421521 3.71215553 7.37316097 8.04880344 10.31549479 5.28473250 9.64592011 NA 11.62841601 -0.57325219 3.33363840 10.03931143 6.11667873 1.74867590 8.81799507 6.61162684 5.43798006 0.01178186 14.13138469 0.42674781 10.25885042 0.01178186 6.64107054 4.18163531 7.40403114 8.43377862 10.045068 8.115002 8.709840 12.808362 9.682370 11.475579 12.898871 11.286286 8.415436 10.069255 12.978219 10.434830 8.947370 9.910567 3.380951 7.865543 11.154247 11.3663307 6.8902764 8.5650232 9.3456148 9.6288753 10.8986985 5.6165753 6.8147683 10.7702148 9.7350906 0.7487188 5.9736457 8.6995794 8.9794206 10.4636119 8.3029003 10.4327269 9.9889939 4.0117103 11.6010781 8.9473701 10.6967548 11.0581559 10.9731637 9.0506331 10.9954202 7.4518911 2.6746866 9.2557925 3.8530176 10.4985491 5.7213727 10.8273641 7.5663030 7.7005472 13.9866663 10.0173386 9.7604660 12.5776094 10.7960762 10.1812215 1.2341334 TCGA-BH-A0HW 62 0 NA 1561 breast stage ia t1c n0 (i-) m0 female 2006 NA NA infiltrating ductal carcinoma 0 asian NA 3 1 1 NA 3 5 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6.589149e-07 3.121176e-07 10.6175491 10.0172445 11.1537335 8.9038315 9.8010359 8.8086946 10.8058273 9.3141686 9.5403034 13.9225642 11.9020426 10.5930890 0.5692966 14.0752455 5.0547617 9.7870501 6.5557456 8.6557364 7.8749408 13.7539311 0.2474415 15.1780285 NA 9.2023298 11.4249819 9.0881845 -0.1676365 8.9863432 9.0131071 3.1542916 5.2697738 6.9719206 5.4953338 4.3134926 10.0723654 9.4586865 8.9804218 11.1668287 9.2965744 11.3361948 1.9478531 11.7820742 14.4907666 7.1076554 9.7497412 10.7537142 12.2415832 4.4762261 NA 8.7037610 9.6011048 -0.1676365 10.2293306 10.1200815 2.5693453 4.1781410 9.9352197 11.9187265 10.1243072 11.2106640 12.5841921 7.8058270 10.9599336 10.9360940 10.6142752 11.0559686 5.3348686 12.4913987 13.5609628 -0.7526801 10.2142725 8.8712880 4.0557943 3.0547617 10.2673448 9.9867653 11.7514807 10.2880389 -0.1676365 4.2697738 11.3811910 9.0683833 10.4840188 9.3315507 -0.3964200 -0.3964200 -0.3964200 0.0481200 0.0479780 0.0456400 0.0662290 0.0400440 -0.8821100 3.6569000 2.5476000 0.8500800 -0.3919600 -0.3933000 0.0357100 0.0357100 0.0357100 0.0192230 0.0192230 -0.0058140 -0.0015243 -0.0062702 2.2746000 1.4861000 1.5180000 -0.0396650 -0.0396650 -0.0550950 0.0127950 -0.3964200 -0.3964200 -0.3766200 0.0465590 0.0456400 0.0567980 0.0559020 0.0559020 0.0400440 -0.8798400 -0.8947300 0.0553730 0.0517390 -0.9071500 0.0146090 0.0146090 0.0146090 0.0146090 -0.3933000 -0.3933000 0.0528100 0.0357100 -0.8835600 -0.8940600 0.0192230 0.0192230 0.0192230 -0.0058140 -0.0015243 0.0000000 -0.9128600 -0.9113800 1.4861000 0.0742650 -0.9304500 -0.0550950 0.0127950 -0.0220580 -0.0031859 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.607 1.518 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 -0.156 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.607 1.518 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 -0.156 6.2131917 11.1524174 5.0928966 9.0006234 3.6386879 10.8134606 2.0547443 NA 8.8048703 8.4905806 -1.7524370 5.5267856 5.6137291 10.3490541 9.5385773 5.5602900 4.8912636 9.5894813 10.5400158 11.7842609 9.5532176 8.2389282 11.2941896 -1.7524370 10.3523329 9.8776737 1.0547790 2.1542916 12.0768321 3.1542916 12.0757415 11.6642041 6.7591598 9.7645839 7.8267226 9.9922405 4.1781410 6.2131917 NA 3.2016025 9.5368492 10.0320415 10.3282241 1.5693453 6.1138817 6.1115927 9.9154051 6.1115927 11.0256891 NA 10.5047945 -1.7524370 4.6224443 9.8450587 6.1567606 NA 8.4298009 5.8621166 4.6397242 -0.7526801 13.8215862 0.5692966 10.3895137 -1.7524370 8.9207158 3.1542916 8.2999745 8.7699882 15.199542 5.142226 8.712973 14.075245 10.256185 9.663148 13.753931 14.414942 9.156272 10.627056 11.683858 11.127755 8.703761 7.958213 1.417326 8.602758 12.741887 11.0330634 7.2417601 9.1913865 9.7841395 9.6872374 10.6656703 3.6397184 5.3869592 11.9020426 6.0287658 3.2016025 7.7885030 6.6846182 9.2952122 10.0695791 9.9215415 10.1527936 12.2104833 1.2473807 12.4877552 8.9804218 10.2787632 10.3866382 11.4981491 8.7392598 10.6794264 8.6246171 NA 8.2249157 -1.7524370 10.2293306 2.8912636 10.5531834 9.9352197 7.0804232 13.8665089 9.5602896 9.2139120 12.6216990 9.4141973 10.0246620 -0.1676365 TCGA-BH-A0HX 54 0 NA 829 breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma 2 white NA 3 1 1 1 3 5 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 9.5768664 10.2473557 11.6027427 9.1558142 9.8359339 8.2419150 10.2482604 9.9626178 9.9920839 13.9858251 11.5268512 10.6208458 1.6089038 12.7999018 3.1324781 9.2804609 6.3368404 8.5455576 9.1872924 13.0675826 -1.3910016 13.7062112 2.6089275 9.7764256 11.3754486 7.3537538 -1.3910016 8.7484710 9.9155511 0.9308509 8.3503867 7.6173484 3.5158134 4.4669011 9.3478563 10.5188128 9.6716405 9.9637200 8.8977859 10.8908497 NA 9.1265891 14.9836536 7.7618889 10.2639942 11.3929410 10.9325374 4.1938821 6.8710144 8.9319743 10.5240521 NA 10.8110436 11.3937590 5.6533152 4.1007759 10.0001633 11.6650493 10.2120824 11.5851258 12.2099940 8.2125460 10.5616609 10.2707512 10.5714543 10.9135562 4.6089216 11.7885178 11.5378081 -0.3910016 10.2786906 9.3300189 1.6089038 5.1324823 10.8830066 9.4885030 11.2507457 10.3355636 5.1324823 7.1519511 11.7407767 11.3608821 9.7968904 9.0714219 -0.0492480 0.4970800 0.5277700 0.1162800 0.0463850 0.5474100 0.5069400 -0.0674170 -0.8730400 1.5596000 1.5289000 3.6569000 -0.0490690 -0.0407110 -0.4723300 3.6569000 -0.4527200 0.3953400 0.3457200 -0.4169200 2.0609000 -0.0867440 -0.0751710 -0.0623200 1.4080000 -0.4502600 0.0730140 0.0903290 0.8151900 -0.0492480 -0.0492480 -0.1218300 0.1110100 0.1239200 0.5762200 0.5069400 0.4073300 0.5132100 -0.4820400 -0.8806000 0.0041048 -0.0259890 -0.4903300 -0.0056342 -0.0056342 -0.0056342 -0.0083971 -0.0551260 -0.0218800 -0.4723300 -0.4723300 -0.4527200 -0.4527200 0.3953400 0.2222600 0.2222600 -0.4352500 -0.4656500 -0.9031800 -0.3927100 -0.0751710 -0.0623200 -0.5233400 -0.4502600 0.0903290 0.9715800 -1.2929000 -0.0934950 0.000 0.000 -0.472 -0.472 0.346 0.346 -0.435 2.107 -0.159 0.012 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.507 0.507 -0.452 -0.843 0.000 0.000 -0.490 0.675 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 -0.472 0.346 0.346 -0.435 2.107 -0.159 0.012 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.507 0.507 -0.452 -0.843 0.000 0.000 -0.490 0.675 0.000 0.000 0.000 0.000 8.0765254 12.8856984 7.6004415 9.1872924 3.1324781 10.6288579 -0.3910016 1.1938979 8.3621363 7.5277827 0.6089038 8.3935543 3.0012438 10.2355414 8.8401409 4.0012348 8.0435479 10.3613003 8.8305070 10.6658960 9.6787521 7.0683516 11.2982626 1.6089038 9.5703694 10.3890493 3.9308509 -1.3910016 11.3278806 3.4669011 12.2903777 12.2174056 8.2491647 9.8989386 7.9398366 9.7529406 4.9127026 2.0683613 -0.3910016 8.0033824 8.4194913 9.2839947 10.0357086 5.5037367 8.3059395 7.6963827 10.3566931 5.5514330 10.7207074 NA 10.2626605 4.3638089 4.4418088 9.5821578 6.5672397 3.1324781 9.0549692 9.6498944 6.1246197 6.1635088 13.8976416 0.1938348 10.6843989 -1.3910016 7.9576477 5.4915613 8.3368404 8.2273050 14.871874 5.527783 9.105773 12.799902 9.584768 10.642687 13.067583 13.075442 8.218929 10.810125 13.026574 12.226387 8.931974 9.342783 1.193898 8.206972 11.603450 10.8226315 6.9487702 8.8437371 9.0887000 8.5904871 10.1138131 6.1246197 8.5790255 11.5268512 8.0601306 0.1938348 7.0518636 7.2800711 11.4596926 9.8674857 8.4761986 9.2162499 11.3713017 4.5631154 11.3559462 9.6716405 9.9920839 9.6917341 11.0516041 9.7999790 10.6702909 9.0549692 -1.3910016 8.8610649 5.6201465 10.8110436 7.3162788 10.3861751 10.0001633 7.1863490 13.8868246 10.6046868 10.1514679 11.9183961 9.7336872 9.3419351 0.6089038 TCGA-BH-A0HY 60 0 NA 1545 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 1 2 2 4 1 2 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 9.319606 9.311281 11.908713 8.935772 9.721928 8.963661 11.040965 9.639208 11.564297 13.963661 10.619451 10.716265 NA 17.175675 2.463282 9.331180 4.228819 7.562018 6.974246 13.195564 -1.443791 13.060902 7.028068 9.178775 11.600275 8.578761 0.141302 9.999119 9.622483 2.726308 7.056239 8.542235 -1.443791 4.311278 9.475257 10.243332 8.420580 10.666550 9.952998 11.087775 1.141367 10.617427 15.535584 8.466691 10.835423 11.365961 11.565172 3.643856 3.948713 9.089723 11.340824 NA 11.308774 5.214607 3.463282 3.643856 11.525420 11.700414 9.492295 12.095673 12.585335 7.539387 11.460463 10.940907 11.276424 10.980822 3.913943 12.398253 11.746990 NA 10.542235 9.193924 3.915005 4.200253 10.406580 9.962067 10.614723 9.677279 2.256830 10.625172 13.802689 11.599250 9.084847 10.023999 0.0141900 1.3815000 0.9728900 1.0253000 0.5353800 0.1193200 0.2678100 0.0539480 -0.5301200 1.9878000 1.7257000 0.1589400 0.3122500 -0.0096806 -0.5317500 3.6569000 3.6569000 -0.0327940 1.0111000 0.0319990 0.0161460 -0.5293000 -0.0120240 3.6569000 1.1468000 -0.2109400 -0.2109400 -0.2109400 0.4914700 -0.0440090 0.0141900 0.0000000 -0.5484700 -0.0956050 -0.4942300 -0.5292000 -0.5292000 0.0070334 -0.5301200 -0.5454200 0.2123800 -0.0289840 -0.7815800 -0.5140500 -0.5091900 -0.0048461 0.8726900 -0.0096806 -1.1180000 -0.5317500 0.2926200 -0.5637600 -1.1073000 -0.0327940 -0.5527600 -0.5577400 1.0099000 0.0161460 -0.5366200 -0.5734800 -1.1223000 -0.6119100 0.4679300 -0.2109400 -0.2109400 0.4914700 -0.4758000 0.4654000 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.536 0.449 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.573 1.066 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 0.558 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.536 0.449 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.573 1.066 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 0.558 7.5507468 13.3128975 5.2978590 9.3045861 1.6181917 11.2687054 0.1413020 NA 8.7597414 8.1032878 NA 7.2239660 -0.4435951 10.7572920 8.7363025 2.1413674 7.2252788 9.6244998 9.9831823 11.7000954 9.7154131 7.5648217 11.3371382 -1.4437913 7.5076781 10.5966831 1.3637318 NA 11.9923240 2.6438562 12.3660610 13.1593241 8.1711032 9.7621867 8.4527256 9.6694843 3.6438562 1.5564049 NA 4.5336755 8.3540550 9.8601742 10.3287079 5.0321273 8.9257072 7.3924437 10.7118441 6.3701747 10.4523472 NA 9.4647859 2.8043221 4.6007871 9.5813322 6.6285534 2.2568295 8.6170894 6.8873108 4.5336755 1.1413674 13.6953850 1.8783330 9.8492901 NA 8.5393868 4.7852105 7.3245775 7.5221774 13.644693 6.263752 8.699776 17.175675 10.345112 10.430606 13.195564 12.026671 11.735973 10.865870 13.608664 9.498175 9.089723 10.271068 -1.443791 7.451211 11.195282 12.084359 4.414372 8.910643 8.516395 8.370175 11.413538 5.905122 5.736302 10.619451 8.205650 2.463282 7.148851 7.208342 12.532957 10.696904 6.064189 8.919433 10.362540 3.556393 11.025162 8.420580 10.082403 10.622483 10.737546 10.191658 11.226164 8.672737 3.556393 9.415454 3.200253 11.308774 7.152583 10.904568 11.525420 6.999337 14.281680 10.078484 9.733190 12.488423 11.283037 10.387701 0.141302 TCGA-BH-A0RX 59 0 NA 170 breast stage iia t2 n0 (i-) m0 female 2010 NA NA infiltrating ductal carcinoma 0 white NA 4 4 2 4 2 4 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 9.16702091 8.68111435 10.87528069 7.90614381 9.90398651 8.73063962 8.43643713 10.78009008 11.67501324 13.46457953 10.27054856 10.34981364 NA 11.74235744 1.51954190 10.28829823 5.63504041 8.91616729 6.98444808 8.49302081 -0.49980982 11.44363271 8.05094404 9.72588496 10.00068920 4.88879682 1.25652763 10.51389238 11.15104274 4.18252546 8.37131142 7.72901567 -0.06537028 6.97899411 8.55665166 9.47181846 9.75955884 9.78712960 8.74034374 9.85569715 3.18253340 7.56395661 14.97143901 6.97587547 10.14952625 10.49827301 10.61891036 3.45815886 7.63503969 8.66081812 12.61110809 0.51954190 10.93952272 5.14405453 7.68614401 4.42645263 9.99191492 11.84599201 10.00068920 11.21942412 11.98138301 7.58923616 10.75756911 10.12627612 10.11885557 10.10013523 2.93459198 10.90182627 9.23266268 3.02206593 10.51956254 10.71595976 2.84149013 5.84149013 10.06001346 9.49014770 10.95488550 10.45128500 2.39402017 7.02735756 12.28457229 12.73205890 9.83017529 9.69198999 -0.0065050 0.3687100 0.3687100 -0.1027600 0.0000000 -0.1102400 0.0808680 0.1081800 -0.0540800 -0.1213500 -0.1213500 0.5537200 0.3318900 0.0065422 0.0332670 0.0332670 0.0332670 0.0029133 0.0029133 -0.1088000 -0.1115500 -0.1148200 0.0413170 -0.0332140 -0.0332140 0.0091705 0.0091705 0.0150280 0.2047500 -0.0994080 -0.0065050 -0.0761450 -0.1027600 -0.2372700 -0.1102400 -0.0752570 -0.0752570 0.1081800 -0.0540800 -0.0540800 0.1149200 0.1149200 -0.1213500 0.3375500 0.3375500 0.0019418 0.0033299 0.0065422 0.0065422 0.0332670 0.0332670 0.0332670 0.0332670 0.0029133 0.0029133 -0.0126230 -0.1088000 -0.1115500 -0.1281600 0.0359470 0.0413170 -0.0332140 -0.0012473 0.0091705 0.0150280 0.2047500 -0.0858550 -0.1376200 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 0.000 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 0.000 9.485347 13.023471 4.715959 9.424448 3.140157 10.978653 4.519561 4.063883 9.471818 9.753981 8.757967 8.794135 7.365053 10.939523 8.884427 1.256528 7.992592 11.033290 8.599936 9.750784 8.257993 6.163418 12.012918 3.301968 8.657407 10.198456 5.220001 NA 10.898219 1.934592 14.194784 12.924793 9.345051 9.968023 10.868659 10.436935 3.022066 3.519567 1.519542 1.519542 9.107027 10.466469 7.022063 5.377544 8.517194 8.283328 10.558482 6.300922 10.084347 2.394020 11.232663 3.022066 4.549312 10.300862 6.829054 8.292152 9.517683 9.057428 10.829797 5.945828 14.240555 1.934592 11.042144 3.104521 9.257655 8.430455 8.220002 8.139171 10.641959 8.456200 8.213049 11.742357 9.527057 11.322348 8.493021 9.912595 8.628087 10.165821 13.099978 11.674170 8.660818 8.578456 4.292149 7.233809 10.929307 10.99833212 4.57845572 8.53265242 9.18371353 8.38992727 9.97780509 8.15860161 7.65227639 10.27054856 8.22231239 -0.06537028 9.81111696 8.53321096 10.79568692 10.35403357 7.26102958 9.36505252 9.05094404 9.01408493 9.99825799 9.75955884 10.39198086 10.30037567 10.45521871 10.64712704 10.60569878 8.43842594 NA 9.19685929 9.24634823 10.93952272 6.40220542 10.99128516 9.99191492 7.28332824 14.23377226 10.36766373 10.91080610 12.48810933 11.02801758 8.86385856 6.30092175 TCGA-BH-A0W3 58 0 NA 728 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 5 5 1 3 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 11.0283987 10.0953750 12.1024524 10.0524643 8.1527158 9.8072192 11.2105403 9.2976885 8.9664178 13.3036539 12.0356606 10.6270476 4.0982679 13.4758122 3.1347959 9.4081231 6.5876530 8.1460213 11.0341507 13.8299786 0.8128678 13.7737727 8.7332184 9.8610801 10.7095765 5.6072830 -1.1870500 9.2568453 11.9890389 1.3978030 7.6583557 4.7436011 NA 2.7197530 10.5111363 10.7735917 11.8538403 11.0968222 9.7324739 12.0185062 4.9626138 10.9530564 13.4627955 9.1295772 9.3722332 12.6050459 11.7283717 3.6202228 7.1302781 8.8599897 12.4229678 -1.1870500 11.7826120 4.7670615 4.9421485 5.1166475 10.5685879 11.8495545 10.2516576 11.8024376 13.1838255 8.0296113 10.4155645 10.0576636 11.7926481 11.2422724 4.7901465 11.6882311 6.0889896 NA 10.2386061 8.7743153 3.0623117 5.1347918 10.4526586 9.7436030 9.9016539 9.1660127 1.6202110 9.9965010 11.9411823 11.2124107 10.2137451 9.7937194 -0.3653300 0.4385100 0.4385100 0.0770950 0.0756570 -0.3630600 0.0907200 -0.3707600 -0.3707600 -0.3659500 -0.3659500 -0.3652200 0.0716780 0.0716780 0.0258120 2.3581000 2.9516000 0.0571620 0.0571620 -0.3527000 0.0895610 0.0616510 0.0383470 0.0315830 0.0315830 0.0000000 0.0000000 -0.0084279 0.0633660 -0.3955800 -0.3653300 0.0255310 0.0756570 -0.3639000 -0.3630600 0.0907200 0.1033700 -0.3707600 -0.3707600 -0.3707600 -0.0882420 -0.0882420 -0.3659500 -0.3590900 -0.3590900 -0.3590900 -0.3724500 0.0716780 0.0716780 0.0258120 -0.0239510 -0.8292800 -0.8352700 0.0571620 0.0571620 0.0571620 -0.3645000 0.0613540 0.0616510 -0.8307400 0.0383470 0.0315830 -0.3585200 0.0000000 0.0000000 0.0633660 -0.3523600 -0.8585100 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.798 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 -0.365 0.073 0.000 0.000 -0.370 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 -0.142 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.798 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 -0.365 0.073 0.000 0.000 -0.370 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 -0.142 8.0368676 12.1346529 2.7197530 9.2233171 1.6964835 10.6801445 0.3978030 NA 8.3166915 4.6202228 -1.1870500 5.0529897 0.3978030 10.5369531 9.6599231 3.7670615 7.1392955 9.2568453 12.2464511 10.7046494 9.6764712 8.0726091 9.1802804 3.3978303 9.4522064 9.4449521 4.2722995 NA 10.5390839 1.1348124 11.4229678 11.6907249 6.0982679 9.8599896 8.6186094 9.3827213 4.4275727 1.1348124 0.3978030 9.6622708 9.2401786 9.4513016 10.4294146 2.3978303 8.9133966 7.7257548 10.3860395 5.9626138 9.9676838 NA 12.7042697 3.7670615 6.5133060 9.6516835 5.6858168 -1.1870500 8.9827908 7.7524449 5.5271110 NA 13.3689526 0.8128678 10.0241457 NA 7.3789199 3.5677523 7.5339651 8.8923503 15.132030 6.247495 8.382721 13.475812 9.829674 10.939893 13.829979 12.956408 10.669610 10.992153 12.688423 8.695509 8.859990 8.270247 2.513314 7.134794 11.664810 10.910569 8.262014 8.620221 9.416492 9.784409 10.577804 6.926608 3.670852 12.035661 7.070254 1.982802 5.471077 8.006342 8.438574 9.884328 7.658356 8.774315 12.901902 3.134796 12.345647 11.853840 10.216943 9.766335 11.669097 9.818490 10.428035 8.380822 1.982802 8.844140 1.982802 11.782612 4.427573 10.576078 10.568588 7.460324 12.584252 10.015602 9.368413 13.138171 10.360724 9.249577 NA TCGA-BH-A0W4 46 0 NA 759 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA white not hispanic or latino 5 2 2 3 3 1 3 3 2 3 NA NA 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.387189e-07 10.4813273 10.1995564 12.3537678 9.8788064 8.1451088 8.8992705 10.8053224 9.5501153 10.0140778 13.6698763 11.9557238 10.8309118 4.1120912 13.0968812 3.1120996 9.8222622 6.6564134 8.6529751 9.7850426 13.3035641 4.5470302 14.4166139 5.7834698 9.1375653 10.9524635 4.8807688 -1.6429548 8.5920234 9.7570179 4.2398486 7.8490591 7.9737548 0.9421579 3.6426092 9.9801730 10.1237350 9.8997543 12.6302002 10.3077620 11.7427988 8.7092496 11.8293891 14.9819158 8.5260911 10.2314190 11.1912820 11.7310228 4.8649983 5.8084159 9.4618048 11.9080730 NA 11.4256484 6.8610323 4.0296296 5.1253907 10.4929153 11.8868806 10.3895962 12.9062687 13.1360019 8.1253902 11.0761669 10.6359139 11.5671163 11.4563894 5.5956111 12.1405112 13.2059757 -0.6427295 10.6339120 8.5629994 4.1648185 3.3114014 10.5531933 10.7818972 10.4430104 9.5890271 2.6791310 8.5872266 14.3614045 13.5071516 10.5002703 9.7724197 -0.00250140 -0.00207840 0.00124810 -0.00221680 -0.00221680 -0.00788630 -0.00360110 -0.00290910 -0.00290910 0.00000000 0.00000000 -0.00110870 0.00346870 0.00346870 0.00305220 0.00305220 0.00305220 0.00097064 -0.00401620 -0.00318590 0.00110930 0.00847430 0.00917050 0.00917050 0.00917050 0.01405100 0.01405100 0.01405100 0.01824300 0.01572700 -0.52113000 -0.00157270 -0.00221680 0.01964300 -0.00788630 -0.00360110 -0.00360110 -0.00290910 -0.00290910 -0.00290910 0.00903120 0.00708480 0.00000000 0.00402430 0.00402430 0.00402430 0.00402430 0.00346870 0.00346870 0.00305220 0.00305220 0.00305220 0.00305220 0.00097064 0.00388540 0.00388540 -0.00481880 0.00110930 0.00847430 -0.53723000 -0.52235000 0.00917050 0.00291330 0.01405100 0.01405100 0.01824300 0.00041593 0.01670500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.60750454 14.04643965 10.17338969 10.33448593 2.35721416 10.95432748 1.35721416 2.05765821 8.13034507 9.26934692 -0.05784211 8.30411216 3.40160316 10.08427558 9.27084356 1.16452886 8.39337973 9.41587420 12.41460552 9.55687846 9.55010917 7.98473972 11.27196485 1.81664066 9.21363161 10.59351923 5.43402100 NA 10.30812636 3.11209958 13.06083928 12.48229657 8.00646242 10.26972117 7.12207734 9.32443238 5.16456104 -0.64272952 0.35715785 8.23372320 8.66668240 8.80532245 9.65297490 6.44996243 8.88124828 5.76659781 9.61223453 6.04370758 9.55626482 0.67915352 10.28201856 3.31140139 5.39062986 9.61103587 5.74298169 3.52713291 8.87192002 7.16777739 5.54703024 -0.05784211 13.87840771 1.52712039 9.98428387 NA 8.78661270 4.67913663 8.02609126 9.06456521 13.4638691 5.4232958 8.5170772 13.0968812 10.3490821 10.0554766 13.3035641 12.7148955 9.4137218 10.9758210 13.2307463 11.3887350 9.4618048 8.8817478 0.6791535 7.5195977 11.9200447 11.587226 7.167777 8.914670 8.992924 8.499313 10.773088 4.714757 7.154868 11.955724 6.527131 3.942167 6.787658 7.017452 12.944749 9.867476 8.523369 8.196410 12.801509 4.605133 12.904963 9.899754 10.039323 10.049386 11.351913 9.981087 10.570006 9.492274 NA 9.399713 5.202696 11.425648 7.115430 10.759419 10.492915 6.800149 14.105215 10.070593 10.381307 13.238798 11.370529 9.523997 1.942158 TCGA-BH-A0W5 77 0 NA 1288 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 5 2 2 4 3 1 3 4 3 3 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 11.2101639 10.1402183 11.7787573 10.1060914 8.5872926 9.7554805 10.4090839 9.9588767 9.3523679 12.8859219 11.0729985 10.9709034 2.8658594 12.2652222 3.7589534 10.0992594 6.2284378 9.0377001 8.9391169 12.2951252 4.9813458 12.8008225 6.9288772 9.6679319 10.8971917 4.1739909 NA 12.0733414 10.6605933 0.7955176 8.5517013 7.3346371 1.0585243 5.2809044 10.2179640 10.2188047 9.9040031 11.8423298 10.0024930 11.5874554 4.6434753 11.5967020 14.4027396 8.9546032 9.6987580 11.7164269 11.0112543 4.6434753 0.7955176 9.3485319 11.8179852 -0.5263689 11.0156151 6.0808815 7.8998155 5.5503651 10.4742548 11.8786920 10.4042878 12.5244195 13.1432107 7.9206339 10.8961410 10.6791911 11.2004073 11.4450941 5.0734647 12.0163406 10.9141602 0.7955176 10.1683437 9.5623388 3.6880684 7.1877964 10.9016489 10.3778089 10.4016987 10.6609026 3.6434753 9.6079768 12.8635179 12.3874684 9.8343976 9.5308653 0.00166420 -0.00138580 -0.00138580 0.00083195 0.00083195 -0.00609040 0.17890000 -0.00041585 -0.00041585 0.64710000 0.64710000 0.65424000 0.00000000 0.00000000 -0.00380760 -0.00380760 -0.00380760 0.00235810 0.00235810 0.05965100 -0.00055444 0.01782400 0.01447000 0.01447000 0.01447000 0.02454800 0.02454800 0.02454800 0.29979000 0.00166420 0.00166420 -0.00124730 0.00083195 -0.00609040 -0.00609040 0.17890000 0.17890000 -0.00041585 -0.00041585 -0.00041585 -0.00221680 -0.00221680 -0.33352000 0.00000000 0.00000000 0.00000000 0.02048300 0.00000000 0.00000000 -0.00380760 -0.00380760 -0.00235530 -0.00235530 0.00235810 0.00235810 0.00235810 0.05965100 -0.00055444 0.01782400 -0.12252000 0.01447000 0.01447000 -0.00124730 0.02454800 0.02454800 0.29979000 0.00013863 -0.31541000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.828 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.828 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 0.000 11.1942223 13.3349283 8.7807514 9.4393347 6.8521487 10.3194326 6.8354946 0.7955176 8.1047277 8.2099524 0.7955176 7.8333000 3.8658693 9.9164940 9.4650723 2.0585243 10.3036696 9.1556673 9.5761824 9.3592468 9.3337761 7.8529289 10.5639938 3.1174125 9.3245188 9.9985818 5.2150184 NA 10.5908689 3.4277402 13.4476065 12.0344804 7.9613907 10.3260800 8.2663410 9.1388864 5.3683668 2.7954761 2.0585243 7.3096010 8.7438458 8.9714024 9.7279887 4.5610145 6.6572355 6.7773316 10.4948776 6.8266972 9.3408293 NA 10.8958782 5.2679664 4.7589534 9.2133903 6.3849426 9.1670375 10.1393306 8.4636543 9.3454558 NA 13.8417841 0.7955176 10.4270195 -0.5263689 8.7750466 4.5179433 7.9102620 9.0910180 13.141873 5.058511 8.755480 12.265222 10.764145 10.188654 12.295125 12.571829 9.299304 11.153690 12.647696 10.717617 9.348532 8.704772 2.997112 7.439335 11.365904 10.977376 7.251627 9.098346 9.190370 8.309601 10.325491 9.076249 9.262269 11.072998 6.571583 3.758953 4.663373 6.719389 11.319237 11.288934 9.244214 8.340829 12.945988 9.545013 12.605596 9.904003 10.792940 9.601545 11.540817 10.290134 10.614061 9.108362 -1.526577 9.635558 9.773903 11.015615 7.099259 10.988785 10.474255 7.878692 14.241683 10.158737 10.448682 12.729022 10.623615 10.118308 3.517943 TCGA-BH-A0W7 49 0 NA 1363 breast stage i t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 7 2 2 NA NA NA 1 4 3 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 3.918809e-06 1.699307e-06 9.8454267 9.6259309 11.3931858 8.5732136 8.9189118 9.6123632 10.0912841 9.8220416 10.2437761 13.0338471 11.0319375 10.4050383 7.4683316 12.0801014 0.3017047 10.2540063 7.4102750 8.4915749 10.1772437 12.5766138 2.4172179 13.2568554 6.4582557 9.6999312 10.5091715 8.8042508 1.8867062 10.3714239 10.9222757 1.7167715 8.6490028 6.8665346 -1.2831408 4.6940667 9.7584471 10.1314731 8.9250224 11.1841387 9.9298922 10.2713768 11.1488077 10.5357694 14.1817803 7.3508367 10.0313712 11.5994310 10.1540199 4.9835728 5.2713771 8.3785658 11.6515845 NA 11.3218043 7.3461449 7.0787315 5.2086421 9.8069003 11.9457568 10.7363786 12.4749070 12.7644231 7.7252163 10.8405860 10.0409684 10.9283720 10.7477998 4.0387171 11.0588626 10.1940403 0.3017047 10.3958281 9.2771207 4.9658535 5.9359571 10.9380729 9.5345710 10.3615454 9.6304253 4.3892157 9.3415833 13.4475234 12.2296518 9.7301106 9.9010434 0.0617940 0.0617940 0.0617940 -0.0123000 -0.0123000 -0.0041546 0.5142000 1.1409000 -0.5114600 0.5325700 0.5325700 0.5325700 0.0000000 0.0000000 0.0039258 0.0039258 0.0039258 0.0116790 0.0116790 -0.0310730 0.4524100 -0.1392300 -0.4633400 0.0390540 0.0457080 -0.0204120 -0.0204120 -0.0204120 1.4902000 0.0617940 0.0617940 -0.0124380 -0.0123000 -0.0041546 -0.0041546 0.5142000 0.5142000 -0.5498500 -0.5114600 0.0248290 0.5387200 -0.5302200 0.5273100 -0.0312230 -0.0312230 -0.0312230 -0.0312230 0.0000000 0.0000000 0.0094491 0.0039258 0.0039258 0.0039258 0.0116790 0.0116790 0.0116790 -0.5171200 0.4524100 -0.1392300 -0.5378100 -0.5195900 -0.4644000 -0.0230180 -0.0204120 -0.0204120 0.4980500 -0.0142280 -0.5113500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 0.000 10.1272393 13.8183533 7.6912026 10.0102595 4.9835728 10.8735030 4.1430505 -0.2831408 9.5168789 8.3997825 2.8042601 8.0114084 2.0387171 10.5925372 9.6490027 3.4716817 8.9682702 9.6438250 9.9377707 10.7026298 9.7392460 7.5465110 10.2818899 1.8867062 8.5979017 9.9377707 4.9647175 2.7167934 10.3397548 2.5241389 13.3888264 12.5553025 8.0566377 9.4582549 10.6266810 9.7068919 5.1925217 0.7167715 0.3017047 11.8271081 8.3167006 9.5732134 9.6244298 4.8460720 7.3995018 7.4683316 9.7342923 6.1091056 9.6940678 NA 10.2506043 5.4849727 3.8867160 9.0542649 5.8244751 7.2206134 10.0319374 8.6311731 9.6062919 -0.2831408 14.0961324 2.1762270 10.2501177 NA 8.5575659 4.3017486 7.9788826 8.8665350 13.666197 6.536967 8.174169 12.080101 9.921970 10.691202 12.576614 11.231995 9.235706 10.351145 13.060668 9.925022 8.378566 9.360644 3.574768 7.574769 11.194799 11.187701 6.431033 8.999876 9.078732 7.708310 10.199848 7.899182 8.528965 11.031937 7.533771 3.240345 4.983573 7.658833 10.237407 10.382124 8.804251 9.430174 11.045182 7.916461 11.859214 8.925022 10.897629 9.901663 10.574769 9.513639 10.387002 8.574769 -1.283141 9.315892 8.355224 11.321804 7.711141 10.505506 9.806900 7.104805 14.230546 10.673164 10.456568 12.036178 10.884520 9.313909 2.176227 TCGA-BH-A0WA 82 0 NA 701 breast stage i t1c n0 (i-) m0 female 2008 NA no NA 0 white not hispanic or latino 4 4 4 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.219503e-06 4.855162e-07 10.47581367 9.60659102 11.79808827 10.50531347 8.79225573 8.19049782 9.40077294 10.40150301 11.27018896 12.96601005 9.63355799 10.37238637 1.62232129 11.85887657 2.25975456 10.44144540 4.87867140 8.92611153 10.42574441 5.31038739 -0.54750999 7.34418937 8.82635845 8.97789723 11.29338037 7.90978690 1.45238458 9.56957482 10.35854484 0.03731193 8.74242464 9.23130424 -1.54750999 4.28529864 8.74011804 12.64931526 9.28133568 10.09806420 9.47477368 11.55438150 -0.54750999 6.24682229 15.57455637 7.14240425 9.47962063 10.96736634 11.08107920 3.91183536 NA 9.83178416 10.64716266 NA 9.53588518 6.87025867 6.18711449 6.13188576 8.86814749 11.82282079 9.36379769 11.70181560 12.59682506 7.87025805 10.92763257 10.78386021 11.72518137 11.49987060 5.12483266 12.67437048 10.01082654 6.45803087 9.84579628 9.91234972 2.99837605 4.42968291 11.50633168 9.81654051 10.63013678 10.46572852 7.79225606 8.49679986 13.04310981 11.69632356 10.72182471 9.85967361 0.0176840 0.0052991 -0.2774500 -0.3151700 0.8034400 -0.4037200 1.1402000 0.7958800 0.0019418 0.8467200 0.8467200 2.3518000 0.1554700 -0.3437700 0.0437230 0.0437230 -0.4067200 -0.3794300 0.0396190 -0.3969700 -0.4036200 0.2392300 -0.3487000 -0.3487000 0.1969500 -0.2186100 -0.2186100 -0.2186100 0.0000000 0.0059700 0.0176840 -0.4060600 -0.0234290 -0.0748110 -0.4037200 -0.3593100 -0.4163000 0.7958800 0.0019418 -0.4581100 0.1429500 -0.0534380 -1.2929000 0.0852550 0.0852550 0.0852550 -0.2198500 -0.3437700 -0.2668400 0.0437230 0.0437230 -0.4067200 -0.4067200 -0.3794300 0.0396190 -0.0077482 -0.3969700 -0.3825700 -0.7532300 0.0335490 -0.3487000 -0.3487000 -0.4005200 -0.6471500 -0.2186100 1.0340000 0.0472680 -0.1027600 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.365 -0.405 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.115 -0.359 0.730 0.000 0.000 0.000 -0.029 1.230 0.000 0.000 -0.137 0.631 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.365 -0.405 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.115 -0.359 0.730 0.000 0.000 0.000 -0.029 1.230 0.000 0.000 -0.137 0.631 7.75390199 13.33461897 2.15283240 9.31194059 3.83368960 12.43468642 0.45238458 3.87866649 8.75504479 9.99881803 7.97007540 9.04972278 5.08176143 11.03266435 8.84149925 3.09626185 4.70033429 10.30922031 6.47477348 9.19134254 9.43246674 7.93016428 12.24712627 1.62232129 9.58490558 9.95225173 1.25978468 NA 9.71332533 4.12483266 12.12062601 13.09428822 8.57004884 9.83178416 9.65514178 9.19471525 5.25976209 2.84472710 NA 8.12836301 7.94024605 8.24030860 7.83178416 8.46642646 8.86866485 6.82309332 9.66733192 7.56093043 10.42610318 1.62232129 12.86371818 1.62232129 4.82744306 9.53232378 7.41908461 3.20729941 9.18372494 8.11596387 4.66185789 4.33504728 12.92573106 0.45238458 9.88963766 0.03731193 8.56354141 6.22058921 8.88285821 6.69558048 12.901812 7.227193 7.840423 11.858877 9.250878 10.178198 5.310387 11.842172 8.753902 10.708025 12.652538 10.958961 9.831784 7.288456 3.359296 8.553068 10.664902 10.6609450 6.0671159 8.9005221 9.3905151 6.9442588 9.9306092 5.6520792 4.6812244 9.6335580 10.5408629 0.7743338 8.1248311 9.2583915 13.9406225 10.1463284 7.7168483 8.7285301 9.4657284 5.6812244 10.5120510 9.2813357 9.8823355 10.2916095 11.4196321 11.4756404 10.7115606 9.5332234 NA 9.1246277 4.0962619 9.5358852 7.0890309 10.0555685 8.8681475 7.6739931 13.5820108 10.5826546 10.5771733 12.7701011 10.4761602 9.4740799 -1.5475100 TCGA-BH-A18F 50 0 NA 1001 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 3 NA 3 2 3 4 2 4 4 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 4.855162e-07 10.0234776 10.2638581 11.8893688 9.9050972 7.4955585 9.3965829 10.0867802 9.8515799 10.1489178 9.6724365 10.9224068 10.5464010 -0.3499708 11.6843517 3.6500637 9.4734359 6.7481002 10.5625838 8.9203639 12.5074665 3.5569566 13.4285565 5.7896197 8.8836883 10.6934377 9.2265531 4.0423817 11.8190541 9.7388568 3.1736232 8.5984359 7.1499147 -0.3499708 5.0076216 9.9837830 10.5681864 9.2406556 11.8234334 9.5365274 11.2277335 3.0423817 9.6841798 14.9438815 9.3292057 10.2569365 10.9725602 9.8956213 4.3505114 3.0423817 9.0981850 11.8279553 NA 10.9717149 6.3295488 5.9261940 4.8979955 10.7467838 11.7280526 10.4355211 12.2456758 12.7577761 8.2957272 10.8944325 10.3730341 11.3896383 10.8863819 5.1094985 11.4650516 11.8151326 NA 11.1386620 9.2666174 3.7814122 5.7268830 10.8923496 10.3995191 9.4947744 9.6337748 2.7375353 9.9832239 13.0205517 12.8866061 10.2702884 9.5726531 -0.2225200 0.7497200 0.7419700 -0.2321100 -0.2328300 -0.2315900 0.0207380 0.0269100 -0.5026800 -0.5101300 -0.5101300 0.0049730 0.0236810 0.0283930 0.0182180 0.0182180 0.0182180 0.0166800 0.0166800 0.0088672 -0.2299600 -0.4870300 -0.4787200 -0.4787200 -0.4787200 -0.1862400 -0.2144800 -0.2040100 0.0264890 -0.2225200 -0.2225200 0.0000000 -0.2159800 -0.2201300 -0.2370600 0.0207380 0.0207380 0.0269100 -0.5026800 -0.5138300 -0.1569700 -0.1569700 -0.5101300 0.5105100 0.5105100 0.5004400 0.5299000 0.0283930 0.0257870 0.0182180 0.0182180 0.0068025 0.0068025 0.0166800 0.0166800 0.0166800 0.0124910 -0.2299600 -0.5082600 -0.4878700 -0.4787200 -0.4787200 -0.2320400 -0.1862400 -0.2040100 0.0264890 0.0309430 -0.4739700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.540 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.540 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 0.000 9.131868 13.394850 8.423208 10.582283 5.508048 11.151408 2.971994 2.109494 8.604265 9.049881 3.737535 8.625888 5.007622 10.504937 9.235970 1.971994 9.983783 9.464651 9.868632 9.189227 9.169990 7.212311 11.687959 2.819995 8.618735 9.415769 5.007622 NA 10.367317 2.109494 12.699407 12.018712 8.246258 9.434703 8.331307 8.960681 4.580809 1.235053 NA 3.556957 8.475027 9.604992 9.946985 6.814976 8.239495 6.949277 9.691728 6.357427 9.055210 NA 10.831842 3.173623 2.897995 9.593235 5.680184 5.364313 9.845441 8.105396 8.941239 -1.349971 13.845902 1.650075 10.193100 NA 7.470247 3.819995 7.694463 8.398261 12.050118 6.050948 8.268454 11.684352 10.442298 10.982665 12.507467 11.117419 9.133884 10.861653 13.449198 10.799498 9.098185 8.133885 3.650064 6.501818 10.971433 12.039700 7.450969 8.968612 9.277602 8.964085 11.457822 6.916855 7.238783 10.922407 6.227497 2.971994 6.672437 7.451486 11.883239 10.322936 7.364314 8.608622 12.393430 6.672437 11.277671 9.240656 10.363885 9.655693 10.673130 10.255548 11.321167 9.765763 9.500256 9.785740 7.283064 10.971715 7.408292 11.137657 10.746784 7.598436 13.601581 10.043459 10.777741 12.439908 10.814976 10.037009 2.971994 TCGA-BH-A18G 81 0 NA 149 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 2 NA 1 3 2 5 1 6 NA NA 0 4 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 5 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 6 0 2.809058e-05 1.036924e-05 9.6038581 8.7034710 10.7339686 6.8993569 9.8898842 9.2318212 8.8822609 10.6342438 12.5148373 12.6435744 9.9925843 10.0967152 0.9068906 10.9003008 0.9068906 11.3102577 6.3987437 11.0705403 5.7976615 8.3359486 NA 12.2702953 1.3219281 9.9693865 9.9329529 5.8454901 0.3219281 11.7182653 10.3758540 1.9068906 8.0834793 7.0967152 NA NA 8.1163440 9.6302671 9.3581017 10.4849487 8.9943534 9.8523344 NA 6.6706562 14.6457921 6.4656676 9.1548181 10.6136744 9.8542840 0.3219281 NA 8.8376279 10.6494807 NA 11.1899789 2.6438562 6.5117527 3.6438562 9.9384769 12.1284777 10.0154151 10.9743250 12.2554343 7.7936033 11.0963034 10.1783536 10.0574841 10.3954002 2.9068906 11.2902349 8.9199806 NA 10.3880173 8.8879821 2.4918531 3.6438562 11.7169266 9.3401283 10.7966480 8.8955753 NA 5.0498485 12.2686516 12.7985477 9.1845655 9.9421479 -0.00470790 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0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.652 0.000 0.000 0.000 0.000 0.000 1.611 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4093909 13.5591381 4.8765169 9.4395712 NA 10.8117761 NA 5.6438562 8.5240519 9.6947932 NA 6.8454901 5.2526654 10.9590058 8.8533096 1.3219281 3.4093909 11.0663415 11.0954794 11.9841514 9.3260081 6.3553511 9.6222807 0.9068906 7.9693865 9.5579423 2.3219281 NA 9.8678579 2.6438562 14.0617614 12.7976615 8.8415643 9.8697866 9.2106713 10.0843101 3.4918531 1.3219281 NA NA 8.6662240 10.5597356 8.1098307 NA 9.2423255 7.9512847 10.0378901 5.9943534 11.1579784 4.1799091 11.2537736 0.3219281 4.7481928 9.8499622 6.1292830 NA 8.0934176 6.7142455 -0.6780719 1.3219281 14.7840149 3.2288187 11.0413169 -0.6780719 10.2235493 3.8454901 7.9366379 9.1195896 12.7604159 5.8917837 8.8898842 10.9003008 10.6816777 11.6012485 8.3359486 10.6410357 8.6483576 9.9657843 13.5447985 12.1419076 8.8376279 9.2407913 -0.6780719 8.2615073 10.2702953 10.9639798 5.8765169 8.5745935 8.7056324 6.7731392 9.3883000 6.0768156 4.6794801 9.9925843 7.0701209 5.6617781 9.1276720 8.0214314 11.6667788 10.5018372 6.1163440 10.0127991 7.3387364 2.4918531 10.4417771 9.3581017 10.4317587 10.0014082 11.5298575 10.9035995 10.1284777 8.0049227 9.1627060 9.1701128 1.9068906 11.1899789 7.7355560 11.3693929 9.9384769 7.3717766 15.0621041 10.7174622 10.5030804 11.4656302 11.0232346 8.9255544 -0.6780719 TCGA-BH-A18H 63 0 NA 0 breast stage ia t1b n0 m0 female 2010 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 7 3 2 NA 2 5 1 4 4 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.976338e-07 1.733986e-07 10.36844775 9.80979304 11.79683904 9.27269976 8.59100165 9.73114335 10.64469604 9.93636365 10.62544411 13.74974843 10.17079073 10.70185354 1.04990952 12.12872287 3.57347148 9.55769957 2.95680012 9.04849532 8.89539503 12.89803879 NA 12.98718676 0.04990952 9.42834070 10.70319788 6.90165374 -0.95009048 9.82880340 10.60353418 1.85726444 8.62165740 7.33530727 NA 6.16884658 10.07088490 10.29901839 9.95378671 11.16462332 9.91795575 10.05060917 6.12672099 11.29367396 14.69756007 8.81936259 9.52766310 11.00337385 10.17273289 3.69376571 3.13737236 9.11195097 11.93159246 NA 10.83943852 5.21983065 8.29783245 4.50933481 9.79473881 11.90808022 10.35994959 12.56424911 12.77068355 5.89539473 10.18561423 9.86879061 11.21324010 11.29901834 4.85725947 11.84391454 12.21166664 2.37183762 10.78461456 9.26300905 3.44290370 6.16884658 9.15581348 10.12337702 11.30964818 10.29664553 0.63487202 6.58128646 11.50779875 12.47630072 9.36957706 8.63110537 -0.007396 0.314730 0.493990 0.193840 0.164380 0.076934 0.229240 -0.016353 -0.016353 -0.542340 -0.542340 0.543220 0.138580 0.062548 0.000000 0.240860 0.240860 -0.111090 0.308820 0.280350 0.291760 3.656900 -0.271270 -0.263530 0.265230 -0.024860 -0.024860 2.012900 0.179890 -0.007396 -0.007396 -0.259320 0.175210 0.076934 0.076934 0.229240 0.229240 -0.016353 -0.016353 -0.016353 -0.067920 0.663560 -0.542340 -0.076205 -0.076205 0.483100 0.383790 0.062548 0.062548 0.000000 0.000000 -0.271700 -0.271700 -0.111090 0.308820 -0.236850 -0.219780 -0.267620 -0.054481 0.241330 -0.271270 -0.263530 -0.273970 -0.024860 -0.024860 -0.257870 0.016363 -0.257630 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 1.910 1.910 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.286 0.256 0.000 0.384 0.113 0.113 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 1.910 1.910 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.286 0.256 0.000 0.384 0.113 0.113 9.49802124 11.86468763 5.42494560 8.92642172 5.98028812 11.29753576 3.37183762 NA 8.25691913 7.39863340 NA 6.43360881 0.04990952 10.42819977 9.72056115 2.37183762 9.49284841 8.92488612 9.60161314 10.79683904 9.89959151 9.19328805 10.90516276 1.85726444 8.60065185 10.00191804 6.21983065 -0.95009048 10.72542097 3.04990952 12.56560474 12.18079716 7.75034455 9.49802124 9.14530196 9.41731963 1.04990952 2.63487202 NA 3.21983452 8.16624896 9.96653083 9.83780751 4.25935535 5.48853108 6.92026948 9.95754668 5.13736826 9.75294323 NA 10.51087264 4.09429520 4.60449244 9.20302614 6.49665728 8.61214715 9.50933659 8.33530727 10.16169260 0.63487202 14.20385270 3.21983452 10.73771794 NA 7.58906384 5.02718502 7.69736308 7.82469213 13.041196 4.509335 8.644229 12.128723 10.223582 10.496988 12.898039 18.298194 9.103831 10.253865 13.532587 11.102813 9.111951 9.303752 1.371838 7.892255 11.552488 11.377458 6.509336 9.655384 8.396419 7.505232 11.000577 8.142662 9.854036 10.170791 6.657236 5.094299 3.219835 8.281942 10.428742 10.999002 7.753808 9.749477 12.138362 8.358244 12.345586 9.953787 10.437384 9.938648 11.088481 10.655847 11.160388 8.998272 NA 9.408369 10.049200 10.839439 5.968768 11.955668 9.794739 7.968768 13.664040 10.553234 10.178544 13.028883 10.680627 9.675614 4.004097 TCGA-BH-A18I 53 0 NA 1093 breast stage iia t1c n1a cm0 (i+) female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 5 2 1 NA NA NA 1 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 11.2917533 10.1962746 12.0233902 9.8400257 8.4376867 9.5758975 10.2504304 10.2200567 9.8412866 12.5519667 11.9839750 10.7790455 6.1989007 12.2477386 2.6805719 9.8928685 4.4879300 8.7511430 9.9089927 12.8382901 2.4879236 13.6588681 5.4706507 9.6874992 10.8459005 7.4062254 -0.3194056 12.1718132 9.3653233 3.1830736 7.7591705 8.0857162 0.6805944 5.0613960 10.0476254 10.7709077 10.8642101 12.0996571 9.6997021 11.3402734 11.9769174 10.4211988 14.6685049 7.4680424 10.3844783 11.4195115 11.2090288 4.3810134 1.5550308 9.5333644 12.3507146 -0.9042781 11.6954089 5.9157910 7.5570914 5.6425081 10.7027113 11.8203393 10.4785064 12.6759297 12.8718396 8.0871340 11.0897889 10.8722180 11.4062250 11.5745082 4.9411016 11.9787328 9.9628909 NA 10.3859191 9.8328596 4.0813396 5.9348160 10.8959055 10.5588812 10.1724279 10.6990068 2.4879236 8.1710912 12.8087302 11.5320636 9.4141550 9.6711515 1.4213e-02 1.4213e-02 4.1241e-02 1.0937e-02 -5.0728e-03 -8.8611e-05 0.0000e+00 2.5441e-02 -6.5395e-01 1.0978e+00 1.0696e+00 1.0715e+00 -2.5225e-01 -2.5225e-01 9.0815e-03 3.6569e+00 1.3574e+00 1.1032e-02 1.1032e-02 6.0463e-04 2.3056e-02 -3.3901e-02 -2.3125e-01 -2.3125e-01 -2.3125e-01 -2.4395e-01 -2.4395e-01 -2.3724e-01 1.8434e-02 4.9449e-02 1.4213e-02 -2.4857e-01 1.0937e-02 -8.8611e-05 -5.4388e-03 0.0000e+00 0.0000e+00 2.5441e-02 -7.1039e-01 -6.5395e-01 4.4200e-02 9.1566e-03 -1.0104e+00 -2.1669e-03 -2.1669e-03 -2.1669e-03 3.1065e-02 -2.5225e-01 -2.5225e-01 9.0815e-03 -7.1965e-01 -7.1301e-01 -7.0609e-01 1.1032e-02 1.1032e-02 1.1032e-02 6.0463e-04 2.3056e-02 -5.0326e-02 -6.9365e-01 -2.2190e-01 -2.3125e-01 2.8110e-02 -2.4395e-01 -2.3724e-01 1.8434e-02 1.1743e-02 -6.9745e-01 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 0.000 9.27986776 13.90117980 6.82353284 10.22199414 2.42258287 10.41782204 3.00250451 0.90296112 8.51240982 8.26428448 -1.90454812 8.97696330 2.68057191 10.03629287 9.14885939 3.55504308 9.73676078 9.79865065 10.90698692 9.77948414 9.41655942 7.81500087 11.03132978 2.26552691 9.74396981 9.97634373 4.38101336 NA 10.43963072 1.09558691 12.23763951 11.95524410 8.63670871 9.56728741 9.24789714 9.00999737 6.76094876 2.61917822 -1.90454812 9.77553209 8.45536175 8.23899555 10.00475530 4.09561222 5.53822464 6.18307556 10.17276177 7.06139604 9.54733858 0.41748800 10.66190419 4.66546668 3.95359118 9.90480560 5.87854389 6.19890074 10.11555039 8.50394218 7.52815401 -1.90454812 13.52079536 0.09558691 10.24345309 -0.31940559 8.22618288 4.11797757 8.05850808 8.54888277 15.9644313 5.1724275 8.7742125 12.2477386 10.3071964 10.0803867 12.8382901 12.7803061 10.0545274 10.9626979 12.9223593 10.3405706 9.5333644 9.0685921 -0.9042781 7.1857248 11.1695864 11.350198 6.408494 8.920571 9.167745 8.482553 10.457731 7.360055 7.468477 11.983975 7.196275 4.417542 5.673042 7.270812 11.477020 10.317199 8.374062 8.705714 13.142353 7.302626 11.755436 10.864210 10.798651 8.969825 10.787356 10.073608 10.548626 8.893274 NA 9.139972 7.397108 11.695409 10.187048 10.837711 10.702711 7.464359 13.724513 10.297124 10.201521 12.883515 10.298348 9.807709 2.265527 TCGA-BH-A18J 56 1 612 NA breast stage iv t4b n2 m1 female 2000 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 1 3 2 NA 2 4 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 4.508365e-07 9.82473333 10.16269456 12.02322146 9.10618157 8.36585742 9.58846823 11.03708380 9.69022885 9.82584476 13.39521500 11.06794217 10.56636139 0.80512733 12.66576406 2.29057185 10.89154427 5.26457396 7.57067771 11.89194232 13.32492628 4.63296031 13.66203497 8.71083054 9.56019047 11.04855465 5.59173925 -0.51684205 11.20046254 12.91484270 2.39011735 8.56536374 8.38860157 NA 3.43741419 9.86907697 10.53578256 9.53033844 10.95285632 9.80457893 11.06276616 6.81413124 11.24289470 14.77458311 7.27639523 9.34197263 11.16642849 10.52999747 3.65314029 3.23809897 9.08961970 11.02769607 0.06818926 11.85716719 6.19057338 4.48321601 5.34119589 10.24102119 11.82459436 10.70812066 12.30837208 12.93918383 8.85499115 11.13224613 10.47968802 11.21219791 10.72549544 5.06817636 12.58231572 9.54458565 -1.51663564 10.48602950 9.07753917 2.94658116 4.80514281 10.94852580 10.04831657 10.10937989 9.17408553 4.23809897 8.90422727 13.52067569 12.41201047 9.72698359 9.41837951 -0.49936000 2.53120000 -0.49434000 3.65690000 -0.00166290 0.92452000 0.00041593 0.00000000 0.00000000 -0.49600000 -0.49600000 0.00444110 0.00458000 0.00736090 -0.02048800 0.27206000 0.27206000 0.00360760 -0.00443120 0.00388540 0.00360760 0.01028500 -0.49788000 -0.46603000 0.06952500 0.00680440 -0.01532900 -0.01532900 0.00629870 -0.49183000 -0.51465000 -0.00968060 -0.49882000 0.00097064 -0.48544000 0.00041593 -0.00332430 0.00000000 0.00000000 -0.01312700 0.08981500 0.08912700 -0.49256000 0.00523270 0.00523270 0.00523270 0.01349200 0.00736090 1.33200000 0.00471900 0.27206000 -0.49152000 -0.50836000 0.00360760 -0.00443120 -0.00443120 0.00388540 0.00889200 -0.48921000 -1.07830000 -0.49788000 -0.46603000 0.03461000 -0.50619000 -0.01532900 0.26907000 0.00541390 -0.51043000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 8.6730391 13.7358430 7.7358802 9.2703009 1.3271700 11.4554764 -1.5166356 NA 8.9609727 8.7240059 0.8051273 8.0258981 2.3901174 10.8563516 9.0831275 1.6531518 5.8319431 9.3825715 9.3566586 9.7535098 9.9074333 7.8862264 11.6859506 2.2905719 7.4775681 9.8258448 1.0681893 NA 10.1029760 1.8051273 12.3390563 13.6456452 7.5680230 10.2064488 8.8733835 9.6112089 3.7311398 1.4832096 -0.5168420 7.0339614 9.5838769 10.2551166 9.9969422 1.4832096 8.6269932 6.1485498 9.5560170 6.9670302 9.7138355 0.4832612 12.0831274 2.5706815 4.9261560 10.0561706 6.7990433 1.6531518 9.6896184 7.8883560 3.7686184 -1.5166356 13.7612283 0.8051273 10.2837100 NA 7.5357824 4.3658605 8.2873458 8.6418242 13.330233 6.284114 9.520075 12.665764 9.953365 10.223417 13.324926 11.559696 9.522524 10.920707 14.360547 8.831943 9.089620 9.200891 2.653129 7.319265 10.892871 11.58732181 7.40802737 8.17844277 9.15032611 8.17844277 10.75934478 6.22468088 6.83194309 11.06794217 6.58650206 0.06818926 7.83856546 7.53719432 11.55601707 10.13157212 7.21792378 9.77611123 10.48673247 3.52760837 11.85893413 9.53033844 11.07707245 10.81609030 11.20324497 10.36126546 10.69540692 8.18538738 7.78242233 9.24933749 3.43741419 11.85716719 7.98902601 11.18495417 10.24102119 6.62787236 13.38096546 9.67920191 9.71263430 12.40784149 10.68533837 9.41985255 NA TCGA-BH-A18K 46 1 2763 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 3 NA NA NA 1 2 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 4.161568e-07 9.5678038 9.5771981 11.0557769 7.7854760 8.8925565 9.1507452 9.6412993 10.0017353 9.8850116 13.7138197 10.8411240 10.5559742 4.4092755 12.4739312 2.5898593 9.5282193 4.4092755 8.4896517 9.4652836 13.1998439 3.3097437 14.0507881 5.3850306 10.3665660 10.4924916 8.5711660 2.5023815 11.0595258 11.8494553 2.3097292 6.7644828 7.0220237 -1.4977713 4.3850306 9.4717742 10.5725086 10.0323061 10.5027398 9.7691742 10.9564298 4.7691740 10.4782356 14.3457935 7.8383140 10.0854705 11.0034784 10.7615424 3.9286546 2.9618270 8.6785607 11.9385786 -0.4975676 10.2497415 5.3225663 5.9202409 4.8947062 10.2015263 12.1016031 10.8516689 12.4106864 12.4259008 8.9064646 10.5600410 9.9416991 11.3173706 10.2886572 3.7118363 11.0762715 10.8047410 0.5024324 10.5251022 9.0072067 3.5978887 4.2837440 11.1303774 9.6798071 9.9541138 9.4717742 2.0873610 9.0062133 13.3504726 12.0387563 10.1659457 9.5440468 -0.4269700 1.2235000 1.3822000 -0.0536830 -0.4121800 -0.0820770 0.3137700 0.3297000 -0.1231000 -0.8852300 -0.8852300 0.0802350 0.0286120 0.0350250 0.0042277 0.0042277 0.0075646 0.2100000 0.2100000 -0.4632200 0.4158800 -0.4202000 0.0063126 0.0000000 0.0000000 -0.4459400 2.0534000 1.8356000 0.4545300 -0.4440000 -0.4269700 -0.4021300 -0.0536830 -0.0800800 -0.0865900 0.3137700 0.3137700 0.3297000 -0.4670100 -0.1042800 0.2672500 0.2672500 -0.9028100 -0.1201100 -0.1201100 -0.1201100 -0.1201100 0.0350250 0.0447810 0.0042277 0.0042277 0.0075646 0.0075646 0.2100000 0.2100000 0.2100000 -0.4415100 0.3717200 -0.4202000 -0.4089900 0.0063126 0.0000000 -0.4136300 -0.4488400 -0.4056700 0.4545300 0.0145340 -0.6529100 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.403 -0.403 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.403 -0.403 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 0.000 8.73600746 13.55970251 6.81072714 10.07319202 2.05081510 11.02570455 0.50243245 -1.49777125 9.03376904 8.32734650 0.50243245 8.32454421 2.40928231 10.56713042 8.69097644 2.67231218 7.88825009 9.62909210 7.62132883 11.26289968 9.42042345 8.68850175 11.33745114 0.96443560 8.12443929 9.54336229 6.55767047 -0.49756755 10.23030811 2.40928231 13.13339412 12.04263678 8.78083697 9.67668913 8.73840171 9.51640820 3.20282516 1.30975827 0.08732705 7.93284013 8.87198499 9.55902541 9.91018654 5.04154526 7.97822252 8.17658009 10.63134860 5.83330505 9.47249346 -0.49756755 10.24890195 1.82431980 4.25727469 10.03288175 6.27743806 2.58985934 8.86542738 7.24385470 6.42720053 NA 14.02787786 1.67233482 10.32376298 NA 6.99424028 4.76917402 8.32734650 9.42571504 11.703577 7.375832 9.020057 12.473931 9.989725 12.062362 13.199844 11.354137 9.073192 10.282927 13.391369 10.298833 8.678561 10.799591 2.502382 7.341592 11.704665 10.959768 6.864331 8.910717 9.203694 8.308131 10.680330 5.087348 7.344738 10.841124 5.102301 3.750317 4.672312 7.080421 10.464561 10.011173 9.166835 8.866522 10.452944 4.978122 12.323313 10.032306 10.812716 10.452214 10.824034 9.915487 10.654672 8.471055 5.769174 9.698547 4.087353 10.249741 7.851116 10.157918 10.201526 6.907529 13.738514 10.498155 10.940400 12.727068 10.426829 9.410780 2.202825 TCGA-BH-A18L 50 1 811 NA breast stage iiia t3 n1mi m0 female 2003 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 2 5 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.121176e-07 10.2719487 10.9277609 12.1518341 10.2913770 9.8257769 8.5345332 9.9157240 9.3916223 7.9987613 13.4722037 11.9191734 10.8063494 1.2092038 13.5506078 3.6354874 6.9234737 3.1634182 8.8376737 9.8086759 13.3348029 1.2092038 13.1371448 -0.7908586 9.3992132 11.5685657 8.2162550 0.5311693 7.3538861 10.9360848 0.7941871 7.9774122 5.6354932 -1.7908586 4.5842650 9.6920359 11.0466588 9.4812745 10.2600970 9.3449372 11.2417903 NA 8.9889474 14.0397927 9.1605711 9.8979153 11.3062724 12.2039350 2.4571477 3.2536263 9.1108492 10.5711718 -0.2057297 11.1238000 2.9641213 4.7327902 3.4186757 10.1764542 12.0184937 10.6071699 10.7310738 12.7372547 8.2753172 11.1002521 10.9528001 11.1977351 11.6641698 5.3177527 11.6781065 11.5961682 3.9096675 10.3757049 10.6164957 1.3807294 4.8385837 9.6302407 9.7105676 10.8028525 11.5521360 0.7941871 4.7790811 11.1706776 10.0393469 9.6180885 8.8276136 0.423680 1.412200 1.395900 -0.276970 -0.294360 0.197180 0.620870 0.970080 -0.767570 -0.790090 -0.790090 3.656900 0.164150 0.164150 -0.174740 3.421900 -0.769280 0.158610 0.158610 -0.300980 0.189680 -0.261790 -0.751760 1.066900 1.066900 -0.603530 0.205580 0.224990 1.071200 -0.205730 -0.266120 -0.052531 -0.244840 0.197180 0.184340 0.620870 0.646710 0.970080 -0.767570 -0.772620 0.394630 -0.458320 -0.790090 -0.778780 -0.768170 -0.022469 0.000000 0.164150 0.164150 -0.174740 -0.150800 -0.777950 -0.798340 0.158610 0.158610 0.122220 -0.300980 0.189680 -0.261790 -0.741160 -0.751760 1.066900 0.360350 -0.583820 0.224990 -0.017391 -0.162050 -0.738710 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.378 0.206 -0.243 1.152 0.000 0.979 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 0.000 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.378 0.206 -0.243 1.152 0.000 0.979 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 0.000 6.7249272 10.0294069 5.6521710 8.2176568 1.5311693 9.8638640 -1.7908586 NA 8.4500194 5.8385837 -1.7908586 6.5579997 0.2092662 10.8044854 8.6047623 3.5667786 5.7561213 9.3059432 8.5255095 11.6499674 9.7315349 7.9490084 10.2783420 1.9096579 8.6469802 8.9856609 2.0165676 -0.2057297 11.5905005 -0.2057297 11.4362422 12.0458701 6.7249272 9.4380466 10.1670555 9.5618231 5.5221123 1.6686638 -0.2057297 4.6015480 7.5777347 8.7454753 10.3810302 3.6686638 7.3815308 7.6015457 9.7700385 6.8276133 10.4398489 NA 9.3013245 2.7941871 2.7941871 8.7466504 3.4514485 2.7327902 8.2049951 7.5842673 4.2315937 -1.7908586 13.2992577 -0.7908586 10.4562654 NA 7.3866472 5.0294087 8.0133590 8.0964485 13.963439 5.601545 8.499247 13.550608 9.955835 10.987305 13.334803 14.145751 8.761897 11.008712 12.989050 12.446214 9.110849 8.820253 2.732790 8.246775 11.426731 10.9352332 8.9105345 8.3268712 9.7604555 10.3359324 10.5670301 5.2645102 9.0726399 11.9191734 5.1634263 0.5311693 5.9707800 8.1059389 8.6604392 9.0181921 9.5640283 9.0333911 11.9479536 3.1161152 10.8913009 9.4812745 10.3975077 10.1362651 11.9034770 9.1850759 11.0549140 9.0206028 0.2092662 8.8110545 5.1280913 11.1238000 0.2092662 10.7940049 10.1764542 7.9542638 13.0790627 10.3519732 9.4283964 12.8248576 9.1750123 10.1085848 0.2092662 TCGA-BH-A18M 39 1 2207 NA breast stage iiia t3 n1 m0 female 2001 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino 5 2 2 NA 2 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 10.6619686 10.6315601 12.0538031 10.0119463 8.0529304 9.2838493 10.4277534 9.5600013 10.0727479 12.7826193 11.2090432 10.5402089 0.1399933 12.3957581 3.6425399 10.1807874 7.8242052 8.3863859 8.4146134 12.5517286 4.8404783 13.4292434 5.8312034 9.8562489 10.7489119 5.2693249 NA 9.7718244 9.3323338 3.5994725 7.6398869 7.7349880 -1.4449692 4.7048277 10.0791305 10.2301535 10.4087780 11.4587722 9.8915851 11.6775830 2.4619738 11.3887593 14.8314938 8.5395396 10.2083715 12.0407821 11.0893814 5.3752584 3.7249994 9.3388952 13.0786405 -0.4449692 11.5305683 5.8679607 5.9559590 5.0628729 10.4772913 12.0228114 10.9425574 12.2529149 12.8609266 8.2693240 10.8940934 10.7210659 11.2929596 11.3942823 5.4619705 11.7728848 11.0050010 -1.4449692 10.4388673 8.9570245 3.1424461 5.6318929 11.4821157 9.4657213 10.0869473 9.6850054 3.4619738 9.9093279 14.1659592 11.9233121 10.3836117 9.7073634 0.00047226 0.00047226 0.89685000 -0.00555840 -0.00555840 -0.01337800 0.45936000 -0.00445220 -0.00445220 -0.00942550 -0.00942550 0.91399000 0.00081095 -0.00024047 0.44931000 0.45408000 0.45408000 0.00289230 0.00289230 -0.00694040 0.00000000 -0.00159380 0.03211900 0.03211900 0.03211900 0.02340500 0.00254070 0.02930400 0.01012400 0.02256300 0.00047226 -0.00174150 -0.00555840 -0.00376040 -0.01337800 0.45936000 0.45936000 -0.00445220 -0.00445220 -0.00445220 -0.00057543 -0.01097200 -0.00942550 0.00358660 0.00358660 0.00358660 0.00358660 -0.00024047 -0.00024047 0.44931000 0.45408000 -0.46740000 -0.46740000 0.00289230 0.00289230 0.00289230 -0.01490900 0.00000000 0.01207600 -0.45427000 0.03211900 0.03211900 0.00137200 0.02340500 0.02930400 0.01012400 -0.00275580 -0.32776000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2442030 13.6355214 7.3974291 10.0282770 3.5823151 10.5030806 2.0144981 1.1400588 8.4269838 9.0237025 -0.4449692 8.6980406 3.9473950 10.4173285 9.2787396 3.0145160 9.4717045 9.1296720 9.0598976 10.1944193 9.4684167 7.9148282 10.7365415 3.1400424 8.8159980 9.8673943 4.1096698 -1.4449692 10.2336786 3.7645266 12.2460587 12.1366322 8.2221902 9.8865553 10.3388953 9.3551696 4.7048277 0.5550308 1.7249994 3.6843587 8.6130704 9.2319172 9.2485654 5.8404809 7.1249340 5.4858164 10.2415791 5.3364369 9.2266196 -0.4449692 10.8468249 3.3624278 4.6843643 9.7053336 6.6286847 4.6843643 10.3899446 8.1419181 6.4619689 NA 13.6849250 0.5550308 10.1730051 NA 7.8927007 5.4498948 7.8265415 8.7300044 13.0236447 5.9038071 8.7174698 12.3957581 10.3704618 11.2358776 12.5517286 12.0587801 10.0803693 11.1969045 13.0252925 11.1103867 9.3388952 9.3437969 0.8770375 7.5121803 11.1130208 11.4739418 7.3816269 8.9844854 9.1125422 8.7826946 10.5351360 6.6049268 8.8206937 11.2090432 5.3364369 3.4619738 4.7250049 7.0248427 11.6684951 10.2498717 9.1277787 9.1220838 12.8155571 5.9038071 12.6723280 10.4087780 10.3946761 10.4196516 11.2940152 10.0820668 10.7832960 8.9548904 0.8770375 8.9389341 6.2345588 11.5305683 7.8882337 10.5059989 10.4772913 7.7399541 13.8632035 10.3356184 9.8859954 13.0225567 10.6517937 9.4566998 1.5550799 TCGA-BH-A18N 88 1 1148 NA breast stage iia t2 n1b m0 female 2001 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 5 1 NA 3 1 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 10.8503896 10.4271050 11.6569781 9.7185065 8.4471031 8.6431134 10.4396362 9.0381997 9.1161030 13.4492737 10.7641999 10.6694955 1.0419438 13.0263207 3.8145504 9.1993087 3.7789234 8.5901413 10.3126463 13.0055200 3.6269297 13.5359421 3.1008599 10.1576295 11.3576773 5.3024909 NA 11.6061318 7.1712449 0.4570164 8.3165341 8.1008552 -1.5428785 5.1849190 9.6828091 10.3597511 12.0499233 12.0391411 9.7951784 11.2264238 NA 11.9434571 14.3545374 7.7621262 9.8233214 12.4960038 11.3978633 3.2118844 5.8057284 9.4591109 12.7275135 -0.5430887 10.9187343 8.3426956 4.9327321 3.4570032 10.4332053 11.8234580 10.3262073 11.7510454 12.8572782 8.1469973 11.0091879 10.8773200 11.3400242 11.3436483 5.4793664 11.4355308 13.0465918 1.6269063 10.8172976 9.4513525 2.9905556 5.0717069 11.1062553 10.6867192 10.6508325 10.5274555 2.1574318 8.7120276 11.9882587 10.7789272 9.6080156 9.4053664 -0.0273730 -0.0286030 -0.0362200 0.4641700 0.4641700 0.4610700 0.9936400 -0.0253740 -0.0503700 -1.1169000 -1.0470000 1.5441000 -0.0217840 -0.0217840 -0.0346650 -0.0223320 -0.0310590 0.4723800 0.4678300 0.4513900 -0.0294480 0.5022100 0.5166400 0.5015100 0.5015100 0.4970100 0.4970100 0.5135000 0.5199600 0.0000000 -0.0273730 0.0179630 0.4641700 0.4975300 0.4509500 0.9746800 0.9746800 -0.0209610 -0.0503700 -0.0368100 -0.0318320 -0.0239770 -1.1376000 -0.0419740 -0.0419740 -0.0206870 -0.0206870 -0.0217840 -0.0217840 -0.0150540 -0.0223320 -0.0310590 -0.0162920 0.4723800 0.4678300 0.5106800 0.4367100 -0.0294480 0.4977000 -0.5750600 0.5166400 0.5015100 0.4745600 0.4970100 0.4970100 0.5104200 -0.0476660 -0.0069195 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.510 0.510 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.522 0.000 0.000 0.228 0.228 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.510 0.510 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.522 0.000 0.000 0.228 0.228 7.57334271 12.51092502 6.83637737 9.90975511 2.90458043 10.13251515 -0.54308874 NA 8.13999381 8.41989531 -1.54287854 6.71909443 6.32736401 10.14524947 9.48973358 2.45699009 4.64682508 9.31575731 5.35181558 10.24204283 10.55683345 7.96281042 11.78033541 3.50138819 10.90743714 9.68882028 2.70491622 NA 11.08908556 2.91643843 12.72004819 11.81317593 8.28672177 10.42602579 8.00196377 9.35333145 2.98055547 1.91643843 0.45701636 1.26435627 10.03301106 9.98642971 9.58821298 1.91643843 7.61868502 6.51228220 10.64867530 8.14524947 9.70255175 0.04194383 10.91924577 0.04194383 6.34574232 9.14925708 5.08519093 -1.54287854 9.81949096 6.89994295 4.88326401 0.04194383 13.69626200 0.45701636 10.26596331 0.77896548 8.92562327 5.52308830 7.80793832 8.78230470 13.827444 4.238359 8.872741 13.026321 10.465077 10.039612 13.005520 12.934504 8.853604 11.031120 12.164897 9.802959 9.459111 7.721442 -1.542879 7.495918 11.197412 10.7873558 8.4328471 8.1900143 9.1530972 9.0029289 10.4053116 6.2962023 4.3638929 10.7641999 5.8663912 1.9164384 8.8610764 6.8129230 10.1840686 9.3064042 9.8589453 8.8832640 12.5065924 1.0419438 13.3821145 12.0499233 10.0087073 9.4745036 12.9040178 9.6779819 10.3165340 9.2251833 NA 9.1554867 1.4570164 10.9187343 6.6219053 10.5720428 10.4332053 6.8276869 13.2842907 9.9508546 10.0596980 11.9248594 9.6615702 9.7923895 -0.5430887 TCGA-BH-A18P 60 1 921 NA breast stage i t1 n0 m0 female 2003 NA NA infiltrating ductal carcinoma 0 white NA 6 3 3 NA 1 5 1 2 3 4 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 7.386782e-06 2.774378e-06 10.7259404 10.7537448 12.0502995 10.2913268 7.1319032 9.1809698 10.7442281 9.7998162 10.0791569 10.4695660 11.3414585 10.7200015 0.1356662 13.5183793 4.0425568 8.5786089 6.1431607 8.2955366 8.8916655 13.7814363 -0.4492963 13.3224501 8.6670466 8.8233325 10.8224575 6.3451178 NA 10.9967522 10.2039957 2.5507037 9.1836979 6.5675105 NA 4.3835937 10.5117907 10.7747045 9.6507080 10.4493042 11.1148523 12.2666647 0.8726318 10.3221923 15.1531407 8.5743464 10.5492932 11.7278108 11.6860914 5.7206287 5.5507037 9.2615092 10.9510485 -0.4492963 11.2917484 4.2786242 6.2649492 4.3580586 11.0139717 12.1974864 10.1654127 11.1501507 13.2942224 8.6341819 11.2106987 10.8501255 11.6605334 11.3899066 5.2921707 12.0006252 11.9300811 -0.4492963 10.1062506 9.4249158 2.8279409 4.9769685 10.6285199 11.1117520 9.7023537 10.0410522 -1.4492963 10.6365072 13.5536057 11.8138252 10.3989344 9.5244001 -0.34549000 0.97874000 0.97874000 0.01153900 -0.00456950 -0.00636680 0.00000000 0.00208190 -0.00774820 0.00110930 0.00110930 0.00110930 0.01263000 0.01544700 0.01614600 0.08666600 0.70907000 -0.05791300 -0.07227400 -0.00166290 0.01433000 0.02216400 -0.33364000 0.33399000 -0.34125000 0.01894300 0.01894300 0.01894300 0.03693500 -0.34549000 -0.34549000 0.00124810 -0.75952000 -0.00636680 -0.00636680 0.00000000 0.00000000 0.00235810 -0.00774820 -0.00774820 0.00055459 0.00194180 0.00110930 0.01131000 0.01131000 0.01530800 0.04018500 0.01544700 0.01544700 0.01614600 -0.72853000 -0.73888000 -0.74390000 -0.05791300 -0.04129500 -0.04129500 -0.00166290 0.01433000 0.02216400 -0.72923000 -0.33364000 -0.34125000 -0.00622860 0.01894300 0.01894300 0.03693500 0.00124340 0.05651300 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8748830 13.4976090 9.2887950 9.9946822 3.0101353 12.1347257 2.8726318 NA 8.4363992 7.4575935 NA 8.4432150 1.3580586 10.7543567 9.3820101 -0.4492963 7.6696441 10.1028915 12.9249951 8.7392915 10.0346394 7.9060536 10.6738542 0.5507037 7.0425557 9.8765704 2.2511434 NA 10.0410522 3.7206287 11.5594815 11.5976562 7.8407219 10.0425558 7.8726306 9.3263131 6.8544832 0.8726318 NA 4.8544844 8.2528754 8.6825596 11.2037718 3.6381665 8.4843198 5.5507037 10.2297429 6.3580569 9.2231281 -0.4492963 8.5882495 3.6799867 3.5507037 9.9424243 4.3456377 2.7206287 9.8221658 7.3644840 8.6447803 0.1356662 14.0239329 -1.4492963 9.8192447 NA 7.2786232 3.0101353 8.5322702 8.9967523 13.177610 6.863585 8.526551 13.518379 10.475515 11.059240 13.781436 8.327136 9.930623 10.293433 13.571943 7.408684 9.261509 9.213371 1.358059 7.212481 11.954647 12.1349607 7.2511425 8.6902540 9.0495521 9.1309612 11.1518978 6.4515689 6.5450556 11.3414585 5.5164880 1.3580586 10.2584932 7.3336679 12.6696438 10.4680749 7.1836979 8.4665823 11.8319083 5.4695669 11.2889914 9.6507080 10.0515446 8.9235679 11.8788167 9.9962349 11.0493027 8.7903012 11.4036223 8.7294797 4.3580586 11.2917484 7.4241470 10.7777170 11.0139717 7.6248444 13.4783419 9.6348468 9.5528145 12.9722417 11.0392961 9.7956611 0.5507037 TCGA-BH-A18Q 56 1 1692 NA breast stage iib t2 n1b m0 female 2001 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.768666e-06 7.282743e-07 10.5256263 10.4476929 11.7993308 9.2635866 8.2882317 8.6706478 9.3153436 10.9650202 11.4683296 13.4181290 11.1303521 10.9394196 2.4611880 11.9714261 4.3457157 9.6548147 7.2119661 9.7054669 10.5555767 8.8705854 1.9560938 9.8660085 8.1248895 8.9810726 11.6572764 6.6433973 1.7607745 12.7901282 10.8855223 2.5681051 8.6171802 7.8482173 0.3457370 4.4046102 10.3391275 10.4113577 9.1347074 10.7793027 10.6268745 10.4629275 6.4331798 11.6538666 15.8219677 8.7471658 10.0719355 11.0693782 10.8893935 4.2843142 -0.2392255 9.7287015 11.5486573 -1.2392255 10.7512133 4.8482173 9.1552175 4.2526049 8.8442340 12.3472427 9.7712828 11.8260026 12.8173078 6.0368791 11.7100343 11.4866428 10.9206260 11.6428246 4.8482173 12.3274034 9.1072683 NA 9.7171309 9.3991905 3.8945656 4.6434002 9.0983767 10.9256617 10.6567086 9.6781269 5.5936436 8.7061986 12.6634125 11.2086128 9.9985622 9.8268440 0.01558700 0.47547000 1.38160000 0.05067700 0.94612000 -0.52287000 0.02584500 -0.00512270 1.00090000 0.00000000 0.00000000 1.06180000 0.45564000 0.01405100 -0.50764000 -0.00072487 -0.00072487 1.38230000 -0.03420000 0.53995000 -0.50004000 0.02595200 -0.54310000 -0.54310000 0.42637000 0.33950000 0.36751000 0.30825000 0.46092000 -0.56316000 0.01558700 -0.70541000 -0.52173000 -0.58439000 -0.49986000 0.04089200 0.03129500 0.47375000 0.52450000 -0.06168900 -0.03299600 -0.47099000 -0.03735400 0.49372000 0.49372000 -0.50805000 -0.51434000 0.01405100 -0.49882000 -0.50764000 -0.00072487 -0.00072487 -0.45971000 0.01474900 -0.01862800 -0.01862800 -1.29290000 -0.50069000 -1.00080000 0.43108000 -0.54310000 -0.54310000 -0.56445000 -0.12174000 0.34164000 0.46092000 0.42536000 0.44732000 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.474 -0.474 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 0.356 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.474 -0.474 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 0.356 8.3229971 12.2206986 4.2526049 8.9714260 4.9551175 12.0626796 1.5681294 3.8900380 7.9003059 9.6586001 NA 8.6072012 8.4715610 9.9437697 9.7845091 2.4611880 8.3325074 11.1940794 7.9105018 10.1056054 8.9427640 8.2705299 11.4263127 2.2201752 9.6601116 10.5185614 3.2843216 NA 9.9262899 3.4611880 13.0031846 12.9654787 7.7607545 11.0507736 10.8922902 9.4929221 5.2036984 1.5681294 -0.2392255 2.4611880 9.4758586 9.0074952 7.0553757 11.2385130 9.9549945 6.2445712 10.1817676 9.6601116 11.0685248 1.5681294 13.5371878 2.4611880 5.6555722 8.9906310 5.6041099 4.5421156 9.5888911 8.6140642 6.9555116 1.5681294 13.8941779 1.3457370 11.0415255 0.3457370 7.3381837 5.6555722 8.0916718 7.6433981 10.523540 8.137965 7.794178 11.971426 10.820667 11.278424 8.870585 12.006901 9.195383 11.847720 13.054801 12.280637 9.728701 8.311501 1.082703 8.364381 10.677381 10.404611 6.714952 8.418966 9.407313 8.848218 9.678022 6.720757 5.542116 11.130352 10.434947 1.930662 10.005713 9.843030 13.313424 11.036588 8.515642 8.248595 10.641486 6.161634 11.212870 9.134707 9.938797 9.556794 12.116794 10.899666 10.489526 9.459459 0.345737 9.531782 8.799674 10.751213 6.950579 11.014307 8.844234 7.832217 14.259323 9.734452 10.445942 12.857058 10.659734 9.547024 1.082703 TCGA-BH-A18R 50 1 1142 NA breast stage iia t2b n1 m0 female 2001 NA NA infiltrating ductal carcinoma 10 white not hispanic or latino 3 3 1 NA 1 6 2 4 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 10.463713 10.467048 11.478663 9.815923 9.476408 9.912507 9.698026 10.076339 10.792667 14.753607 11.009074 11.189524 1.249385 15.397453 4.534796 8.679846 5.409265 9.654003 7.652405 12.502502 -0.750494 13.839805 4.834357 9.278681 11.205407 4.458848 1.708805 8.255018 10.212290 3.772952 9.054331 6.483013 1.249385 3.864107 10.573855 10.724113 10.522606 10.687925 10.681413 11.772588 1.056722 10.977527 14.530853 8.307033 11.304505 11.752847 14.321735 5.990860 2.834347 9.233812 11.316996 NA 11.265157 4.399144 6.004281 4.819249 10.721577 12.248072 10.103093 11.022120 12.846631 7.119759 11.073159 10.436820 11.497321 11.094295 5.293786 11.476107 11.273494 -0.750494 9.648671 8.995908 3.195663 5.119759 11.048068 10.176060 11.340498 9.189707 2.056757 9.110480 12.251505 11.239497 10.632288 8.735223 -0.00539920 0.46519000 1.52050000 0.49701000 -0.02616700 -0.00585450 0.00000000 -0.02548300 -0.53591000 0.00374650 0.00374650 0.98183000 -0.00678130 0.50342000 0.01084200 3.65690000 3.65690000 0.53432000 0.48492000 0.00027728 0.01782400 0.00374650 0.00013863 3.65690000 3.65690000 -0.02137300 -0.02137300 -0.03190500 0.53661000 -0.53256000 -0.00539920 -0.00207840 -0.52522000 0.03735900 -0.53774000 -0.00609040 -0.01147300 -0.00152430 -0.00885260 -1.11130000 -0.00235530 -0.01366000 -0.01188700 0.00332990 -0.01174900 -0.00013862 -0.00013862 0.50342000 0.01796300 0.01084200 -0.54411000 -0.53632000 -0.53632000 0.49009000 0.48406000 0.48406000 0.00027728 -0.00664320 0.00736090 0.02791900 0.00013863 -0.54693000 0.00972760 -0.02137300 -0.03190500 -0.53144000 0.01167900 0.01796300 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5690657 12.0904664 6.3889455 9.5026500 4.6244343 10.9728411 3.2937825 0.2493847 8.9350183 8.2238082 -1.7504940 8.5790330 1.2493847 11.0274706 9.5120755 3.4973186 8.4782122 8.8567237 7.7412465 9.7367312 9.4271743 7.7230991 9.2641113 1.5713370 7.4637124 9.5020588 2.2493847 0.5713370 11.6081820 3.0042856 12.2878839 11.6919483 7.4685621 9.7417474 9.0429969 9.7880674 5.6672450 3.0042856 0.5713370 0.5713370 9.5696299 7.7149598 11.2625417 4.4973186 7.7686958 6.3154829 10.7766261 5.6244343 10.3892646 NA 10.0779267 2.1562995 3.2937825 9.4299864 4.0456264 5.5161791 8.0775298 7.7962882 11.5450189 -1.7504940 14.2423540 NA 11.6074952 NA 8.6829788 5.0948821 7.7749142 8.5196889 13.841572 8.973907 8.617900 15.397453 10.501763 11.501911 12.502502 9.714960 11.597772 11.274706 13.153322 12.100947 9.233812 7.972201 5.004281 11.912507 12.450599 11.185479 10.379964 8.745248 9.278681 8.576946 10.667344 6.357918 7.104262 11.009074 6.516181 1.056722 5.562276 9.107071 11.284021 10.193739 9.011775 8.605845 10.127444 7.229533 12.095364 10.522606 10.067177 9.020883 8.811636 9.933704 10.716235 8.927113 4.082285 8.380376 6.761146 11.265157 6.191908 10.904316 10.721577 8.427025 14.131511 10.049080 10.063175 11.294641 10.357591 9.724620 2.156300 TCGA-BH-A18S 79 1 2009 NA breast stage i t1c n0 m0 female 2003 NA NA mucinous carcinoma 0 white not hispanic or latino 5 5 1 NA 3 5 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 10.5031948 9.8139118 11.9558817 9.3096219 9.3273328 9.5858372 10.8495868 9.8154814 9.8300490 14.5819809 11.3829076 11.0339092 2.8449882 13.6401374 5.3397467 10.2069270 7.7496864 8.2788532 9.8222631 13.8782498 1.7074806 14.3396116 6.5199774 8.9733291 10.9537453 10.0794741 0.3855967 8.7938813 11.8005011 3.0293999 8.5504586 6.5654601 NA 3.5554726 10.0025599 10.4172528 9.2954448 11.3273329 9.4550014 11.4459098 8.6251503 12.1751871 14.2293500 6.6148997 9.5907339 10.9307574 11.3594283 2.5554726 3.8118204 8.9285835 9.9061703 -1.6144033 11.1206845 4.1404351 4.6143683 4.5950023 9.9251951 11.7433785 10.3162890 11.5041683 12.9507727 8.2528305 10.8663418 10.9519792 11.6975837 10.6645818 5.1669122 12.0636015 10.4289207 -1.6144033 10.0226293 9.1750852 2.1960089 5.0720500 9.3148100 9.1628070 10.5769194 9.9535077 4.0579787 9.3118475 12.3501632 12.2985345 10.0089759 8.9733291 1.05380000 1.52810000 1.71360000 0.01467900 0.01945100 0.04747600 0.02244400 -0.00263220 -0.90542000 0.61281000 0.61281000 -0.38817000 -0.00567570 -0.00843850 -0.00911700 -0.00911700 0.03143600 0.00000000 0.00000000 -1.03870000 0.00374650 -0.03463000 0.68887000 0.72093000 0.72093000 -0.10592000 -0.10592000 -0.10592000 -0.04549900 -0.08910600 -0.00069303 -0.00899060 0.01467900 0.02440800 0.06265100 0.02244400 0.02244400 -0.00263220 -0.93037000 -0.94078000 -0.06279300 0.00221910 -0.37696000 -0.88411000 0.02651400 -0.00774820 -0.10039000 -0.00843850 0.00958830 -0.00911700 -0.00911700 -0.01725400 -0.01725400 0.00000000 0.00000000 0.00000000 -0.90404000 0.00374650 -0.03013100 -0.04387300 -0.89748000 0.72093000 0.01726400 -0.10592000 -0.10592000 -0.04549900 0.03453600 -0.08333300 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 0.000 7.4650366 11.4153565 4.1669082 8.9391810 1.3855415 10.5022205 NA NA 8.5186937 7.4051423 NA 5.7543210 NA 10.3664053 9.5573540 1.5554726 5.4730141 9.1603386 11.5584479 11.1160218 10.1835535 7.8551937 10.1450237 3.8064375 10.6420552 9.4908054 -0.0294408 -1.6144033 10.6299155 2.9091202 12.9352761 12.6314014 6.7164683 9.7453012 7.2497373 9.1628070 1.1928885 2.4730076 NA 4.3397503 9.1595149 10.0517756 10.9749687 0.7074364 7.5545996 7.3995719 9.9477941 7.0929104 10.1965248 NA 13.2209606 1.1928885 10.3692578 9.8452394 5.8416184 1.8449882 7.9928817 7.3570954 5.0997959 -1.6144033 13.8130936 -1.6144033 10.8893773 NA 9.1177189 4.8449831 7.9516059 10.2156707 13.9604091 3.5950023 9.2200227 13.6401374 9.6916076 11.6684952 13.8782498 12.2165619 9.3876635 10.7800143 13.0851783 10.1117697 8.9285835 7.3685449 -0.0294408 7.9110726 11.9102158 10.3010576 8.1437750 8.8592574 8.9845347 8.6709540 9.8070643 5.6047207 8.7681757 11.3829076 6.4079186 -0.6144033 8.3221896 6.1680904 11.7008427 10.2605330 8.9752028 8.7981215 12.6127163 3.7074806 9.8189649 9.2954448 10.5744495 10.3498925 10.7301249 8.6836144 10.4330164 9.2697221 -1.6144033 9.0945578 3.6334777 11.1206845 5.5454217 10.6260448 9.9251951 7.1168710 13.7855972 10.4065316 9.8107675 13.1883204 9.4908054 8.8774047 1.1928885 TCGA-BH-A18T 70 1 224 NA breast stage iia t2 n0 m0 female 2003 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 6 3 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 5.548757e-07 8.5240527 9.7797374 11.4205843 10.4370294 8.2944089 10.3077561 9.5403807 10.1372774 10.7539655 13.1463067 10.1411063 10.5461676 1.2596039 12.5110923 2.7190520 7.6454725 6.1844231 9.1199210 8.2225061 4.5263944 -1.7403358 10.4962221 10.2902771 8.5982796 11.5628199 5.3576435 1.5815441 8.3628977 11.2311535 1.2596039 9.0211613 7.4469617 -1.7403358 4.4690654 9.0061244 11.6604893 9.5217047 10.1097967 9.4944274 10.8396329 0.2596642 7.4836119 14.4684158 7.0587949 8.4519026 11.0913130 11.6682050 3.7514637 NA 9.5616776 10.2397495 NA 10.6398004 3.7514637 5.8962355 6.3785515 10.7826817 12.1522476 9.7004791 11.5754671 13.2464741 6.2079768 12.1892382 11.7465543 11.5486201 11.1005845 5.5054464 12.5595334 7.9016616 -0.7403358 10.3074154 9.3283882 3.5158638 4.4884315 12.1750225 10.4562120 10.8270907 10.1521527 0.8445463 2.9034625 12.0933895 11.5622488 9.8613807 9.1074501 -0.083465 1.519300 1.111700 0.427550 0.393130 -0.056577 0.388680 0.303620 -0.567530 -0.575550 1.267100 2.777000 1.281700 0.955700 -0.558170 2.109900 2.109900 3.656900 0.014749 -0.213580 -0.553270 -0.252010 -0.544750 -0.036946 -0.059269 0.303990 3.270700 -0.531650 0.416300 -0.516090 -0.107620 0.187370 -0.536120 -0.581860 -0.570410 -0.577530 -0.568230 -0.708270 -0.567530 0.004580 0.122850 -0.592730 -1.292900 -0.272960 -0.276410 -0.464080 -0.476810 -0.551860 -0.561470 -0.515370 -0.052396 0.521060 0.456830 0.312090 0.014749 0.016705 -0.187480 -0.562060 -0.544010 -0.527880 -0.544750 -0.036946 1.448600 0.323980 -0.531650 -0.613830 -0.030404 -0.558670 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.304 0.304 -0.108 1.004 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 0.000 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.304 0.304 -0.108 1.004 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 0.000 6.9977023 12.4737772 5.6942395 8.9661060 1.2596039 11.8927186 0.2596642 -1.7403358 9.5146385 6.9565771 4.5450108 9.8247120 1.7190520 11.0385084 9.8016744 NA 7.4093570 11.3070747 4.9738546 9.2232285 9.0383360 6.8743199 11.6326109 1.9600668 9.5944418 9.3530275 1.5815441 NA 9.8743198 2.3470703 13.6511556 12.8879415 6.5263959 10.2235897 7.7713627 9.0128268 0.2596642 3.4295356 -0.1553733 -0.1553733 8.5263963 9.1836800 5.6083391 2.5815441 9.3944790 5.9320352 9.5809744 5.3256994 10.3791995 3.5075410 12.5954189 3.5450170 3.5075410 10.4220673 6.4992081 2.9034625 7.5633908 7.4345357 5.0409713 0.2596642 14.1418708 -1.7403358 10.5042711 NA 10.2170747 1.9600668 7.9196059 6.5542312 13.735407 11.765669 8.202124 12.511092 9.880288 11.648569 4.526394 7.599460 10.796343 11.414586 13.116181 12.478022 9.561678 8.763436 2.429536 7.883491 10.799738 10.7839068 3.6171574 8.5905268 9.9858281 9.7674045 10.6112974 5.3681328 3.1665066 10.1411063 9.9552733 1.0669502 9.1739951 8.3930090 13.3190389 10.9023386 5.5724926 7.3230052 10.1665006 4.5994606 10.7304239 9.5217047 9.6827259 10.2119872 11.7603273 10.3236790 10.5164083 10.4488167 NA 9.6312831 4.3681328 10.6398004 5.8218530 9.7439293 10.7826817 8.0637407 14.3017181 10.0290346 10.4848174 13.1717040 12.5827351 9.2978430 -0.1553733 TCGA-BH-A18U 72 1 1563 NA breast stage iiia t2 n2a m0 female 2003 NA NA infiltrating ductal carcinoma 9 white not hispanic or latino 6 3 1 NA 2 4 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.942065e-06 1.040392e-06 10.4791391 10.2743554 11.3521207 9.3675672 9.2145394 9.7969372 9.2128302 10.1886840 9.6693824 13.2207722 10.8043342 10.7330791 3.2474719 16.9980641 3.0161397 7.7617128 6.2272963 8.2051129 6.5478678 12.7103164 NA 13.9081956 0.8145094 9.7912213 11.7400684 7.0700147 3.0161397 10.0117307 11.0622042 -1.5075828 8.1436378 6.7733568 NA 5.1507993 10.8012094 9.6212248 7.2306786 12.5587592 9.7716161 10.6423330 NA 9.7529175 14.6119323 8.5607998 9.4569269 11.1139510 11.4374809 4.1072945 6.0999158 9.1614708 11.8638180 -1.5075828 10.6977683 6.0394806 6.1292109 5.3254764 9.9899388 12.3074687 10.1350890 11.0329561 12.9062799 6.7262059 10.6244428 9.8320518 11.2718949 10.7620048 4.7779877 14.0520825 9.7286001 1.8145094 9.7020393 9.5315049 2.2226809 5.4698664 9.1146377 9.8757501 10.2566281 10.5052104 3.2999480 9.8913296 12.4942580 10.7811636 9.6848787 8.1310220 -0.560650 0.684770 1.041700 0.763110 1.773500 0.246710 0.450060 0.485470 0.579560 0.571510 -0.055746 1.572500 -0.075816 -0.040729 1.113200 0.851460 0.851460 -0.039642 -0.039642 -0.563340 -0.217610 -0.226110 -0.330610 3.656900 0.285190 -0.339270 0.078518 0.199260 1.142100 -0.336740 -0.560650 -0.013429 0.823370 -0.659910 -0.513710 0.490640 0.490640 -0.674410 -0.603690 0.015610 -0.305790 -0.329800 0.068689 -0.919040 -0.576330 -0.255860 0.362180 -0.040729 -0.040729 -0.652660 0.851460 0.784560 0.784560 -0.039642 -0.039642 -0.039642 -0.592530 -0.606500 -0.226110 -0.706830 -1.292900 0.406970 -0.887410 -0.356560 0.078518 1.142100 0.118020 0.680160 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.646 0.646 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.306 -0.306 -0.323 1.314 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.646 0.646 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.306 -0.306 -0.323 1.314 -0.576 0.000 0.000 0.000 7.90621357 12.91609579 8.68857309 8.80433434 3.24747185 10.72200563 -1.50758276 0.07751647 8.72620555 9.13734341 NA 7.26763598 2.66250176 10.75644190 8.97135559 4.55867785 6.50381302 10.18998796 10.82741781 9.94379697 8.91752902 7.82797649 10.40435234 -0.54392984 9.68857326 9.73337722 1.07751647 -0.50737767 11.39194280 2.66250176 13.58818896 12.04513492 7.43216521 9.55395715 9.49750858 9.72680466 4.77798774 1.66252454 -1.50758276 4.27394848 8.51356575 9.44605478 10.55260628 2.29994795 5.77743287 6.19994516 10.24705594 6.40547507 9.62444292 -1.50758276 8.94688523 1.66252454 4.01614862 9.69313513 6.03561731 6.57473429 9.28293435 7.80546917 8.29024745 1.66252454 14.01991017 0.49262233 10.02737511 -1.50758276 7.20683171 3.39947191 8.38132923 7.90832777 12.497762 6.260771 8.784908 16.998064 9.218804 11.342186 12.710316 10.969332 10.228133 10.489059 12.778638 10.630858 9.161471 8.961210 2.299948 8.187814 11.230678 10.460893 7.206832 8.215393 9.256628 10.683954 10.185672 5.876291 3.918854 10.804334 6.647404 3.350568 6.016149 7.976966 11.625246 9.240779 9.293486 7.854530 11.100610 6.547868 11.656827 7.230679 9.770454 10.743476 11.072138 8.700820 10.863001 9.969332 8.008286 9.126344 6.980426 10.697768 7.699600 10.629257 9.989939 7.593327 13.613229 10.345505 11.445145 12.948812 9.853433 9.826300 1.814509 TCGA-BH-A18V 48 1 1556 NA breast stage iib t2 n1b m0 female 2001 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4.369646e-06 1.387189e-06 9.521809468 9.667097346 11.266300545 10.205237564 7.884524051 8.816156796 10.118002497 11.123370876 11.847375417 14.264552418 10.515943420 10.928120821 1.866195849 12.346804016 3.050623586 9.867221587 4.050623586 10.928856840 8.864146516 5.395450163 -1.593354492 9.190582516 9.510053621 9.001771286 11.261634120 6.630768022 -0.008246888 10.177842442 11.113693403 2.214124805 9.620477544 8.651129566 NA 4.976620255 9.602753046 11.580911213 9.102863856 10.559367530 9.179080297 11.056021966 2.728704197 6.174949644 14.932989886 8.047589099 10.231724476 11.106771903 10.717662544 2.991734975 NA 10.744666354 10.064530858 NA 11.256757233 4.710547483 7.277130218 7.757704684 11.023544309 11.985845956 10.651724164 10.997118920 13.353900404 7.349280344 10.492238265 10.678354270 11.676622935 11.198132158 4.914559740 12.919382786 9.422180850 4.976620255 10.431212902 8.545037435 4.167783415 5.372551681 9.395450377 11.014327255 10.423574074 10.486250587 0.728660667 6.566637089 12.895986543 10.377950020 9.571044203 9.865172320 0.108040 2.064000 -0.100790 -0.051316 1.719200 -0.400860 1.330900 -0.476590 -0.063435 -0.476910 -0.476910 2.341800 1.725900 -0.062495 0.355280 1.361700 0.333670 0.393800 -0.475860 2.555800 -0.464300 1.016300 -0.448030 -0.022881 -0.465670 0.348110 0.348110 -0.433330 0.504290 -0.455110 -0.479130 -0.519420 -0.051316 -1.292900 -0.594870 -0.483550 -0.483550 -0.476590 -0.119780 -0.489110 -0.477840 -0.519550 -0.553730 0.296920 -1.292900 -0.473630 0.365100 -0.062495 0.323500 -0.484810 0.360510 -0.499340 -0.496730 1.322800 -0.458220 -0.943270 0.247470 -0.437340 0.283110 1.278200 -0.464620 -0.022881 -0.477230 -0.460890 -0.433330 -0.477440 -0.472010 0.416300 -0.351 -0.454 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 0.000 -0.351 -0.454 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 0.000 8.269403033 13.014211678 2.107219168 9.110669393 3.692170508 11.332505600 1.576667247 9.818276671 8.713966570 9.862093029 5.882498773 8.375317514 3.406767940 11.356592491 9.468811978 -0.593136842 7.824618307 10.172880499 6.530886960 7.902620518 8.594897089 7.654693306 10.762942563 3.576691430 9.549511117 10.312904732 1.214124805 NA 10.199149396 -0.008246888 11.872969699 12.048704590 7.057817398 9.214925460 8.713966570 9.753833482 3.264746590 3.536052900 0.728660667 7.168317104 8.292461984 8.214120919 5.746616431 1.866195849 6.921322068 6.050621409 9.642779899 5.161653931 9.096763639 1.991716838 12.724814213 5.006679520 3.050623586 9.835999844 7.814182525 6.006679520 9.169978100 8.782891108 6.746616431 0.406754337 12.771857875 -0.593136842 11.321711393 0.991753112 7.579192973 2.406754337 8.277130683 7.603982339 13.659542 7.748840 8.019634 12.346804 11.046333 10.389759 5.395450 11.704399 9.502822 11.481889 14.794985 12.801228 10.744666 7.025152 3.654688 7.343403 11.369120 11.027444 4.384043 8.405356 8.571673 10.109371 10.719399 6.833030 4.596589 10.515943 1.406754 -1.593354 8.218943 10.908496 12.437174 11.001557 8.136387 7.814034 9.689854 6.742156 10.858453 9.102864 9.929347 9.855398 12.022051 11.851004 10.440877 9.612559 NA 9.133103 6.768710 11.256757 7.220547 10.861900 11.023544 7.982305 13.012882 9.970915 10.204022 13.038170 11.042711 9.672967 1.991717 TCGA-BH-A1EN 78 1 2053 NA breast stage iia t2 nx m0 female 1999 NA NA infiltrating ductal carcinoma NA white not hispanic or latino NA NA 1 2 NA NA 2 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 9.5360669 10.1136056 10.8485851 10.5320505 8.1296426 9.2390677 9.6407767 9.3478229 11.0688820 12.5520221 8.7373251 10.2549008 -1.6551715 17.3485476 8.8064871 10.8712624 5.0998969 7.8567604 9.0323836 12.7234381 2.7373190 7.0350058 4.7025578 9.6876381 10.8616927 6.5149334 -0.6549443 7.5929354 12.6710861 2.8044460 8.9606374 6.9262082 NA 3.8368633 9.7733679 11.0244878 10.1499455 9.9495609 9.3534364 11.9644253 0.3450557 7.8247882 14.4878328 6.4955161 9.2176827 11.6282408 9.5816200 4.3894016 -0.6549443 8.8318427 10.4380952 -1.6551715 11.2243996 5.0174320 4.8044408 4.3894016 9.8981569 11.4704212 9.7791147 11.8651353 12.8014263 6.0174320 10.9718575 10.1980677 11.1388142 10.7644413 4.2757446 11.3564097 8.5459062 NA 9.8957546 8.9807260 0.9032697 5.2276525 10.2326092 9.4535322 9.7717966 9.8273116 2.5929234 9.8995966 11.6328644 11.6942890 9.8773637 8.1426692 -0.574810 0.726890 0.726890 -0.116050 -0.127250 -0.126860 0.329400 0.359790 -0.606170 3.656900 -0.631390 3.656900 0.314270 0.323920 3.656900 -0.599770 3.656900 -0.122310 -0.122310 -0.580430 0.327300 -0.107020 -0.082988 3.656900 0.343000 -0.073397 0.352120 0.352120 0.359140 -0.574810 -0.574810 -0.161210 -0.116050 0.338300 -0.126860 0.329400 0.312030 0.359790 -0.606170 -0.085777 0.739970 0.739970 -0.611180 -0.113830 -0.113830 0.325050 -0.592730 0.323920 0.323920 -0.592480 -0.584450 -0.604230 -0.604230 -0.122310 -0.122310 -0.122310 -0.595830 -0.117620 -0.107020 -0.606600 -0.082988 -0.558310 -0.597600 -0.520350 0.352120 0.340240 0.342030 0.389090 0.314 0.314 -0.563 -0.563 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.555 -0.555 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.611 -0.611 -0.119 -0.119 0.000 0.000 0.314 0.314 -0.563 -0.563 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.555 -0.555 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.611 -0.611 -0.119 -0.119 0.000 0.000 8.3379461 11.9430603 8.8217539 8.9688894 2.0454430 11.3723955 NA NA 8.8217539 6.4794343 NA 7.3168390 3.8685682 11.1357635 8.4896662 0.3450557 7.0898413 9.8252931 11.3310275 9.5852027 10.0697816 8.1115369 9.9638521 1.6669383 8.8986371 9.9495609 1.3449989 NA 9.1563825 0.6669383 11.9968443 12.2411509 7.4110966 10.7915741 5.9523382 9.7957035 7.2337510 3.2519008 -0.6549443 NA 7.8247882 9.0147787 10.6280961 3.1523619 9.8502239 8.9402651 9.9139140 7.4057040 8.9987487 NA 9.6708754 3.1523619 3.5929354 10.1160432 6.8592093 -1.6551715 11.1863755 8.5714201 8.6246182 1.3449989 13.6977409 -0.6549443 10.4972926 NA 7.9205470 5.0454473 8.9606374 9.0771752 12.4459279 7.0998948 9.3590283 17.3485476 9.5810220 11.6622790 12.7234381 9.9798189 11.8998388 10.3818682 12.6399156 9.8237774 8.8318427 9.7319479 -0.6549443 7.2904511 10.6487885 10.14104737 5.55445992 8.51117072 9.02272733 8.25789694 9.09512850 5.80443825 4.51493020 8.73732510 6.76286037 NA 8.28164586 6.42433260 12.73604990 9.17473048 8.33227157 8.48711489 10.34747122 3.15236192 9.12918460 10.14994548 10.57262368 8.83284793 10.86587189 8.89863706 10.07971730 8.99066618 -0.07005755 9.39746030 NA 11.22439957 6.13942447 9.21383037 9.89815695 6.35063161 13.65153231 10.20841971 10.41378605 11.57862743 9.78587696 8.86464396 -0.07005755 TCGA-BH-A1EO 68 1 2798 NA breast stage iia t1c n1 m0 female 1999 NA NA other specify 1 white not hispanic or latino 1 2 5 1 NA NA 1 4 2 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 10.1075453 10.7009636 11.4797692 10.2363151 8.1861776 9.0164300 8.9512121 10.3090491 9.8653122 13.8501308 8.8933607 10.5294879 0.7796379 12.0945793 4.4800583 9.6135626 5.7645107 8.3720754 9.8084454 12.2852646 NA 13.3168368 0.1947175 9.1647619 11.2893935 4.0020094 NA 9.5455951 9.5109374 2.0020184 8.0833990 8.0432789 -0.8054086 5.5345068 10.3998382 12.4174508 9.6292841 12.3695816 10.4972949 11.6693759 1.1946544 9.9694431 14.7018312 7.8925962 9.4402087 11.2002805 11.6388944 4.7182191 -0.8054086 9.6489552 11.6870099 0.1947175 10.7381711 8.5631623 7.6540875 6.0894727 10.9335926 11.6751937 9.7357525 12.5822694 12.7050493 7.7945686 11.0723235 10.6082574 11.4351492 10.9615989 5.2821173 12.1075453 12.3353260 0.1947175 10.4995776 9.4294733 1.5165699 6.9293661 10.6784717 10.4944363 9.7540330 11.2434834 5.0275478 8.4162431 13.7622556 13.2239432 10.2540004 9.3770502 -0.00193990 0.61086000 0.62533000 -0.00165610 -0.01986300 -0.03084400 0.29676000 0.33221000 0.29333000 3.65690000 2.07580000 2.52150000 -0.33733000 3.65690000 0.30665000 0.37463000 0.37463000 0.36133000 0.50794000 -0.03283100 0.00083195 -0.31961000 -0.30345000 0.02820000 0.02820000 0.34941000 0.34478000 0.36559000 0.32721000 0.01880300 -0.00193990 0.02974700 0.36657000 0.00041593 -0.03735400 0.29676000 0.29676000 0.33221000 0.29333000 -0.35931000 0.31838000 0.32125000 -0.35168000 0.00000000 0.00000000 0.00000000 0.00000000 -0.72967000 -0.34274000 0.30665000 0.37463000 -0.34469000 0.64066000 0.31385000 -0.34744000 -0.34744000 -0.01697900 0.00083195 -0.31961000 -0.32379000 -0.30345000 0.02820000 -0.34630000 0.34941000 0.34478000 0.32721000 -0.00373950 0.05266800 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.034 -0.324 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 1.724 2.076 0.000 0.000 0.106 0.106 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.034 -0.324 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 1.724 2.076 0.000 0.000 0.106 0.106 9.5815962 14.1271937 10.0588421 10.3620741 0.7748398 9.8758943 NA NA 8.1459408 8.8294671 1.5165699 8.3094654 4.8385131 10.0164299 8.7758565 0.7796379 10.3012188 9.5478028 9.7833705 8.3545271 8.6702678 8.1164968 11.0393617 3.1015492 8.0588419 9.9268233 3.3645864 NA 10.3194235 2.6540918 11.7432371 11.8807187 9.3303652 10.8235571 8.4520439 9.0354339 3.0020184 2.0020184 -0.8054086 3.1015492 8.4234748 7.4089750 10.4573381 5.1015450 6.3374774 5.1488528 9.8626546 6.5345052 9.5642534 2.0020184 11.1338678 3.4425853 4.1488528 10.1659912 5.5743801 1.7796379 9.9553759 9.2184102 2.1946544 NA 12.8140735 0.1947175 9.9011520 0.7796379 7.8056807 5.4614434 8.6396706 8.3570474 11.307421 5.749245 8.688512 12.094579 9.805681 10.228079 12.285265 11.010439 9.241398 11.357362 13.209897 9.728959 9.648955 9.787113 NA 7.266118 10.916610 11.223253 5.569695 9.190423 8.430670 8.686509 9.822226 6.629284 5.569695 8.893361 6.194656 3.364586 4.194654 5.809219 11.885309 10.414430 8.265608 7.484675 12.787347 5.534507 10.305322 9.629284 10.363955 9.836708 9.788047 10.169071 10.546699 9.180498 NA 8.939507 3.194654 10.738171 9.424676 10.242462 10.933593 6.756898 13.550970 9.773972 10.407152 13.199052 10.501287 9.617772 2.194654 TCGA-BH-A1ES 35 1 3462 NA breast stage iib t2 n1a m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.467973e-08 10.5664284 9.8880446 12.2848715 9.6789031 9.2829744 8.7684014 10.4031169 10.8842956 8.2980814 14.4220949 12.3172087 11.3470222 0.7130799 12.7884309 2.5204725 8.7410250 5.1054350 8.7215473 6.9799053 13.4483575 0.7130799 14.2978465 3.1725515 9.2248716 11.3917190 7.2129652 NA 10.0316616 10.3388277 1.2980717 7.3424756 8.5554692 1.2980717 2.8830342 10.6124758 9.8488281 9.7534086 11.8886684 10.2464486 11.3461141 5.5957632 11.3415644 13.9659321 8.1635878 9.3890759 10.8391780 11.5483798 4.7575140 6.7243460 9.3461141 12.1241001 -0.2868321 11.7965982 8.3820040 4.7575140 3.2980864 10.7899344 12.3458869 10.5164428 13.3603524 13.1444859 7.1888519 11.2701038 10.9841674 11.4571117 11.6903988 5.8628654 12.3963328 13.6357962 -0.2868321 10.0772535 9.8424019 1.3076617 3.6200116 10.6578309 11.3121019 11.5961439 9.9274380 3.1725515 8.8654036 13.4944786 11.4316517 10.5091584 9.6673152 0.01537000 0.01537000 0.00964690 0.00000000 0.00000000 -0.00166290 0.01209700 -0.45661000 -0.50863000 3.65690000 -0.72208000 0.91400000 0.01279500 0.01276100 -0.02630400 1.66800000 -0.76064000 0.02118300 0.01913800 -0.01881300 0.01335300 -0.24484000 -0.73670000 -0.28513000 -0.71568000 0.01282000 0.01282000 2.01720000 0.02848100 0.04244900 0.01537000 -0.23251000 0.00000000 0.00305220 -0.00166290 -0.76587000 0.01363200 -0.46249000 -0.50863000 -0.46600000 0.00027244 0.00430210 3.09120000 -0.54975000 -0.54975000 -0.54975000 -0.54975000 0.01276100 0.01276100 -0.02630400 -0.41641000 -0.76064000 -0.76064000 0.02118300 0.01913800 0.01913800 -0.01881300 0.01335300 -0.24484000 0.01992300 -0.73670000 -0.70684000 0.00346870 0.01282000 -0.71986000 0.02848100 -0.00578030 -0.74098000 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 -0.120 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 -0.120 8.7979273 13.4863611 9.9574827 9.6438562 2.3313613 10.9880793 -0.2868321 0.7130799 8.5332978 8.5648678 1.2980717 8.1011363 0.7130799 10.3506494 9.3641706 1.2980717 5.5957632 10.5467996 10.3130316 9.4393370 9.7229335 8.0618469 10.2877124 0.5928278 9.8032312 9.5059092 3.4135535 NA 9.3315044 2.5204725 12.3766770 12.1147984 7.8372400 10.0859839 8.4779905 9.4066058 6.5586090 -0.2868321 -0.2868321 0.7130799 8.1807242 6.9705063 9.7939364 3.2980864 9.0424443 5.2366801 10.4895519 7.5773049 11.2307882 -0.2868321 9.1288607 2.5204725 4.6200116 9.6208208 6.0236413 1.7131239 7.8577770 5.9610468 3.0350432 NA 13.8224598 -0.2868321 10.8443328 NA 7.4613116 4.5204725 8.5460089 7.8320602 15.629301 6.643856 8.690399 12.788431 10.308125 10.163299 13.448358 11.897994 8.497754 11.082716 12.986769 9.756146 9.346114 8.781897 NA 6.427365 13.095473 10.5780787 7.2677081 9.3148895 9.5896358 8.0529690 9.9841383 4.3569748 7.3784544 12.3172087 6.3130318 9.1908770 8.9419376 8.3287485 12.2679475 9.5972894 8.2089737 8.7018034 11.6792638 2.0350608 12.0449539 9.7534086 10.3296676 9.0903295 10.7486053 9.3587773 10.0203197 8.8137812 -0.2868321 8.2798961 3.4135535 11.7965982 8.7602429 10.3899575 10.7899344 6.6200101 13.9393052 10.5491692 9.7670448 11.5888682 11.0772535 9.2561506 NA TCGA-BH-A1ET 55 1 2520 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 5 2 2 3 NA NA 1 4 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 11.6523911 10.3945765 12.0022772 10.0082454 8.5164112 9.5420504 10.9135268 10.0271202 8.9863677 13.3836336 10.9874388 10.6653577 1.7842527 12.7032001 4.2760946 8.5680606 6.2599767 8.6414474 9.5643734 13.5095834 3.4566748 13.8627699 3.1417924 9.3219475 10.9700484 6.7615233 NA 8.3813651 8.5307582 0.7842527 7.6060180 7.3673265 0.9541963 5.2518478 11.9477362 10.6171338 11.2293880 11.2775989 10.6571110 12.1797110 11.6945117 11.1124980 13.7727731 9.3935333 9.3373786 12.0331349 11.6723211 4.2760946 4.2599805 9.6060178 12.9794237 -2.2155798 11.4416738 3.7842422 6.5980242 3.5391340 11.0951405 11.8491549 10.6014273 12.0601500 13.4579393 7.3729582 10.8725351 11.0557827 11.7762969 11.4213214 5.3388309 11.7787740 8.0416318 -2.2155798 9.8898249 9.2120805 3.1421520 5.5324354 10.6295378 10.4619634 10.1853900 9.9672587 2.5391340 11.0870255 13.1368045 12.2109672 9.9093343 9.0292022 0.00063826 0.00063826 0.00063826 0.00069327 -0.00287370 -0.00249380 0.00000000 -0.00207840 -0.00207840 -0.00083160 -0.00083160 -0.00083160 0.00000000 0.00000000 0.00539780 0.00610900 0.00610900 0.00194180 0.00194180 -0.00318590 0.00305220 0.01237600 0.01530800 0.01530800 0.01530800 0.02132300 0.02132300 0.02132300 0.01084200 0.02496900 0.00063826 -0.00636680 0.00069327 -0.00249380 -0.00249380 -0.00760080 -0.00328330 -0.00207840 -0.00207840 -0.00207840 -0.00097017 -0.00097017 -0.00083160 -0.00529560 0.00505780 0.00505780 0.01852300 0.00000000 0.00000000 0.00539780 0.00610900 0.00610900 0.00610900 0.00194180 0.00194180 0.00194180 -0.00318590 0.00305220 0.00960290 -0.62291000 0.01530800 0.01530800 0.00305220 0.02132300 0.02132300 0.01084200 0.00140930 -0.59531000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.557 0.408 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.557 0.408 8.9985628 11.7504788 6.1196342 9.6515225 3.5600791 10.0085470 1.2436691 -2.2155798 7.9044817 7.6281648 NA 8.2880595 1.2436691 10.4108654 9.4244886 1.3692152 9.1706452 9.6012274 10.7944221 10.3330657 9.6728196 8.4361922 10.3609643 4.5524263 10.0748387 8.9396944 4.4136009 4.9237957 9.9151360 3.1061640 12.8244907 12.1163503 8.5214909 10.6147590 7.9997768 8.9566712 3.7149818 1.3692152 0.5915837 2.3692152 8.6052206 8.2830930 11.5068378 5.1417965 7.3009291 5.4352952 10.4588774 6.8121503 9.4663606 -1.2159149 11.4150797 2.3078074 5.2840884 10.1053263 6.1492980 4.6171339 9.1984003 7.7471396 8.1516584 NA 13.5191121 -0.6308407 9.6472685 -2.2155798 8.8306857 5.6044213 8.0154647 9.2068342 13.020638 4.498487 9.762239 12.703200 10.650557 10.543924 13.509583 12.267304 9.126658 11.218220 13.084096 8.652295 9.606018 7.567242 NA 7.857046 11.400678 10.945376 6.974068 9.321947 8.898637 8.240598 10.544271 6.413601 7.781423 10.987439 5.449581 2.428089 2.307807 5.779163 10.676976 10.113480 8.983431 8.088024 12.104762 5.969118 13.245527 11.229388 10.507691 9.798613 11.505877 9.297478 10.682089 9.791972 -2.215580 9.463627 5.442456 11.441674 7.629734 10.674888 11.095141 7.108424 13.348689 10.373895 10.866725 13.135528 9.515138 9.353625 2.106181 TCGA-BH-A1EU 83 1 1286 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 8 2 2 4 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 11.3794808 11.0579439 11.8290401 10.6875687 8.0660246 9.9406959 9.7246544 10.3411879 8.6803261 12.6200459 11.5977786 10.7168884 4.8635024 11.3750017 4.8635024 9.0979028 7.3785862 9.0571055 9.4582364 12.8797960 2.2475022 12.9582436 7.0548669 8.8995433 10.6761453 8.5827080 -2.2757863 9.7843690 9.0294418 1.3088851 8.0116622 8.1813312 -2.2757863 4.2631095 10.7138767 10.6096465 10.4788376 11.7215706 10.5987393 12.1587086 -0.6910567 11.5952778 13.8900543 9.3819071 8.9364465 11.7567707 11.6516354 5.3750012 1.0458623 10.0280161 12.4249316 -0.6910567 11.3406138 6.0902712 8.2406349 5.7628697 10.8636613 12.0806083 10.2430948 12.2044247 13.4195046 7.3821614 10.9214740 11.4098289 11.9556963 11.4850857 6.0231577 11.7588350 9.9536702 0.7239517 10.1410113 9.6708563 4.0641586 7.0254463 10.5294924 10.4563295 10.0831506 10.6971093 3.4788424 9.1157306 13.5342706 12.7323349 10.3718581 9.1216247 -0.220340 0.284220 0.276470 0.037500 0.037500 -0.223420 0.295170 -0.225270 -0.222190 0.181020 0.181020 0.181020 -0.221940 -0.221940 0.026795 0.030392 0.030392 0.182530 0.181320 -0.226250 -0.064508 0.037500 -0.216390 -0.215030 -0.215030 0.035696 0.035696 0.042732 0.115400 -0.219600 -0.220340 0.000000 0.037500 -0.223420 -0.223420 -0.225880 0.285800 -0.225270 -0.225780 -0.222190 0.034536 -0.216390 0.181020 0.131430 0.131430 0.131430 0.137610 -0.221940 -0.226550 0.026795 0.030392 -0.229450 -0.228830 0.182530 0.181320 0.192380 -0.226250 -0.064508 0.037500 -0.220590 -0.216390 -0.215030 0.283110 0.035696 0.035696 0.130510 0.019223 -0.234430 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 0.000 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 0.000 10.5731597 12.5185182 8.0759936 9.9397863 5.7900396 9.3233980 5.1668922 1.3088851 8.0682457 8.3560364 -0.6910567 8.8169913 3.9334027 9.9137746 9.4846701 0.8939058 11.1181448 9.6861232 10.1282934 8.4586597 9.6695073 8.9878060 11.1314834 4.6065903 9.6785098 9.5904562 4.1333416 -0.6910567 9.8226401 4.4921352 12.4707792 12.0626864 8.7594365 10.4407695 9.4373366 8.5208009 7.0185708 2.1162649 2.0458623 0.8939058 7.8609411 7.2416190 10.4113257 7.2037307 6.6677545 4.7239517 9.8445120 6.9088249 9.0935475 -0.2761357 12.2593469 5.1751613 5.8272373 9.7320285 5.1747500 7.0481304 9.7278192 9.6631619 5.7518573 -0.6910567 13.7402143 1.1833912 10.1462777 -1.2761357 7.9075853 5.8787670 8.6119322 8.8749666 13.094011 4.518365 8.429582 11.375002 10.587809 10.482590 12.879796 12.825803 9.498210 11.820748 13.520116 10.298780 10.028016 8.851945 -2.275786 7.266982 11.631967 11.044187 8.381483 9.082601 8.115194 8.194609 10.392613 7.629337 7.578819 11.597779 5.863502 3.215803 6.881298 6.888480 11.259954 11.127228 8.136520 6.952769 13.007617 8.282371 13.230640 10.478838 10.553871 9.039100 11.315823 9.678510 11.074199 9.260683 NA 9.008144 8.243586 11.340614 7.905102 10.625190 10.863661 7.965933 13.836634 9.788693 10.377691 12.610647 9.465838 10.313133 4.063796 TCGA-BH-A1EV 45 1 365 NA breast stage iiia t3 n1b m0 female 1999 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 6 3 3 2 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 5.895554e-07 10.1702088 10.1162469 11.5731082 10.1303025 7.9875943 8.8093730 10.2033536 9.1832694 10.0507172 13.6112800 9.9996763 10.5948115 4.6344481 16.7363154 4.5886427 8.8043724 7.8941908 8.0459584 8.9974872 13.3582150 0.9563541 13.6556009 7.4609956 9.3909870 11.2161188 6.1736072 NA 10.6839557 10.0685543 1.6344539 8.0353270 6.8093733 -1.3654997 5.4158060 10.5178544 11.5882801 9.4617901 10.7672685 9.7905305 11.5294546 5.5769604 10.7771927 15.4086683 8.0003978 11.2282984 10.8805942 10.9198496 5.0938770 -0.3654997 9.1051063 11.0690757 -0.3654997 11.0693362 5.9382293 5.2783045 4.9563773 10.2904253 11.7993544 10.6224220 11.9855247 13.0602534 7.3418070 10.3602397 9.6931156 11.2870684 12.0599256 6.4482287 13.1871165 8.4207169 4.6568167 10.3555466 9.6484680 3.3046133 4.9742953 10.3178807 9.7566284 9.2427023 9.9715118 5.1262997 9.3959987 12.1666816 12.6863361 10.1837507 9.4900945 -0.51331 1.34870 0.20993 0.91178 0.58901 -0.43502 0.27174 0.23407 2.39120 0.40033 0.40033 0.56986 0.23117 0.24311 0.00000 -0.01180 -0.01180 0.20580 3.65690 -0.11913 0.24078 -0.14091 -0.52000 3.65690 0.48509 -0.17360 0.16550 0.16550 0.23272 -0.53327 -0.50660 -0.12187 -0.12588 -0.18886 -0.41859 -0.17132 -0.11834 0.22993 -0.51681 -0.53429 0.59368 -0.53715 0.40033 0.24934 0.26561 -0.14312 0.20350 0.24311 0.25840 0.00000 -0.01180 -0.01180 -0.01180 -0.13186 -0.14348 -0.14348 -0.51340 0.24078 -0.79886 -0.51641 -0.52000 0.42049 -0.50871 -0.17360 0.16550 0.23272 0.64103 0.21039 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.603 0.603 0.204 0.083 0.232 0.000 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.603 0.603 0.204 0.083 0.232 0.000 8.6761066 13.7208325 7.1658285 9.7219102 1.8043840 11.3523380 -0.3654997 -0.3654997 7.9676027 7.3859918 NA 8.4705295 2.0938644 10.1481750 9.3884998 1.9563913 5.1262997 9.3733842 11.7119308 9.4264243 8.8903376 8.4767976 10.8605585 2.0938644 7.7892656 9.6637347 -1.3654997 0.9563541 9.8255066 2.3348829 12.7916364 12.9328680 6.9473307 10.4522305 7.7245596 9.2500771 8.6045532 2.0938644 -0.3654997 5.8632670 8.0877179 9.2592428 11.4104692 1.8043840 9.3373646 6.5048126 9.4720755 5.5413383 8.4908729 NA 11.1149852 0.9563541 4.0607132 9.1123978 5.9355776 3.2782970 8.9631224 7.5503266 5.9920002 -0.3654997 13.9702913 -1.3654997 9.8242721 0.2194628 7.1928678 5.8242714 8.2819059 8.3893349 11.990675 5.415806 7.763730 16.736315 9.577189 10.006768 13.358215 12.620467 9.566662 11.285723 13.486587 9.178446 9.105106 8.923314 1.441802 7.158010 11.011929 11.5403985 5.4799387 8.4256104 8.7507914 9.4385786 11.3525950 6.1501474 4.1263039 9.9996763 6.4288626 3.3893328 5.2343595 7.3434620 11.5341820 10.3055462 8.4917753 8.4092344 11.0866886 3.5886487 11.2634283 9.4617901 10.1885566 9.9478974 10.5585176 9.9444922 11.2304042 9.2546673 10.3801217 9.3921208 4.8043737 11.0693362 8.7598609 10.6488272 10.2904253 7.5201441 13.5713614 9.6644247 10.2057261 12.4697084 10.7996685 10.0799796 0.6344074 TCGA-BH-A1EW 38 1 1694 NA breast stage iia t2 n1b m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 8 2 1 6 NA NA 1 4 2 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 6.935946e-08 10.4594110 10.3456515 12.2031377 10.2933022 8.9065016 8.8934751 10.2953671 10.2312367 9.9343290 13.5306419 10.6650267 10.7351575 0.1088924 12.9607192 4.6531632 8.8491830 6.0630369 9.3480407 8.6583040 12.6470290 0.5238630 13.0923088 3.9833129 9.4715876 10.8587095 3.4307670 NA 11.0906452 11.0353831 1.1088255 7.5545443 8.5778034 NA 4.6531632 10.3539966 10.7466725 10.5214099 12.2587988 10.2243173 12.0966962 6.7812653 11.4522109 14.9509448 8.8647625 9.2687113 11.7780204 12.2283216 5.4065197 5.0937334 10.5781427 11.7634761 0.1088924 11.1473019 5.1963041 7.3280088 4.2243182 9.6786957 11.8925204 10.0454781 12.7422138 12.9257571 8.4911039 11.1785136 10.8426858 11.6998949 11.6426565 5.4896617 13.9738967 10.1196013 -1.4759363 10.5662209 9.8356258 2.9872299 6.6271647 10.6284763 10.5929917 11.0066856 10.9247570 6.7087528 9.2042371 12.9344614 11.8013103 9.7394105 8.9385628 -0.2923400 0.7910300 0.7700400 0.9569300 1.2718000 0.2251000 0.8884600 -0.0159280 -0.0159280 -0.0125760 0.2538600 0.5709900 0.2282300 0.0000000 0.0553730 1.9493000 -0.1578400 0.2627900 3.6569000 0.0515300 -0.2495800 0.1937500 -0.0047079 0.4926800 0.4926800 -0.0766780 0.1825300 0.1825300 0.3822100 0.0101460 -0.2923400 -0.0202750 -0.3024000 0.2733200 0.2251000 0.0570830 0.0423070 -0.0159280 -0.0159280 -0.0120240 -0.3235600 -0.0297210 -0.5781200 -0.0145030 -0.0145030 -0.0145030 -0.0145030 0.0000000 0.0000000 0.0553730 -0.1617900 -0.2862000 -0.2862000 0.2627900 -0.2908300 -0.2908300 -0.6135500 -0.2561400 -0.0744110 -0.3018100 -0.0289010 0.4926800 0.0055529 -0.2975600 0.1825300 0.3822100 -0.0655810 0.0523830 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.760 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 0.000 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.760 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 0.000 8.633708 11.703787 8.985357 9.284597 4.790663 10.793881 4.108842 -0.476137 8.420210 6.501157 -0.476137 8.624724 2.771801 10.310147 9.382636 2.845811 10.011718 10.020232 9.435270 10.105078 9.705036 8.553165 11.060853 4.078465 8.334449 10.061096 6.776544 NA 10.900274 2.224318 12.072820 12.664787 7.767052 10.027206 10.914047 9.295367 6.436767 1.693810 -0.476137 6.093733 8.311780 8.817349 10.495062 6.153234 7.991687 5.703787 10.235975 7.359928 9.844678 -0.476137 10.267029 3.733333 4.568269 9.432615 6.028658 4.950142 9.174032 8.147759 7.089931 0.523863 13.338360 -0.476137 10.214749 NA 8.451655 5.153234 8.492544 8.066909 14.805644 6.375627 8.994536 12.960719 9.907582 10.604695 12.647029 13.144327 8.604695 11.624047 13.459825 10.919947 10.578143 8.136746 -0.476137 8.347245 11.760490 11.657020 6.890200 8.741835 7.943838 9.516816 10.420354 6.850307 7.433771 10.665027 5.663430 0.523863 7.560052 8.263540 11.703476 10.292062 8.114464 8.558677 13.328210 6.418696 11.808765 10.521410 10.056234 9.424744 11.627657 10.099417 10.767349 9.478074 -1.475936 8.839537 6.224318 11.147302 5.031673 11.034743 9.678696 7.943838 12.816846 10.018733 9.804068 14.068269 9.794757 9.737589 1.693810 TCGA-BH-A1EX 67 1 1508 NA breast stage iib t2 n1b m0 female 2000 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 2 2 2 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 10.2463379 10.2183070 11.6824614 9.8802785 8.2837047 9.5385188 10.0838596 11.4899644 9.4536297 14.7369255 9.5499234 11.3673050 0.5023306 12.9822937 3.5023433 10.0114603 7.0285183 8.8917971 6.6655761 12.5166562 2.0872931 12.2053113 -0.4975676 9.5004653 10.9638245 5.5612375 -2.0825301 9.5448800 9.9050018 1.8242791 7.6655754 7.9576720 NA 3.8481171 10.4621056 10.6099980 10.5044568 11.6536788 10.6828758 12.1197360 11.6377337 10.4959911 14.1246829 8.9954000 8.9251108 11.6165212 11.8090713 5.3520099 7.1389701 9.2842511 12.6010352 NA 10.9161492 5.4409456 7.1935066 5.5320925 11.1694566 11.7456182 10.1975734 11.9482221 12.9506335 8.5458282 11.0444096 10.5929427 11.1882618 10.7054891 5.4487655 11.5163656 11.6210699 NA 10.6431748 9.3225240 2.1706301 6.3768148 10.9312286 10.7776936 10.1566828 9.9497727 2.2393064 9.2245835 13.5688267 12.6307691 10.6243102 9.2050948 -0.0186280 1.1433000 1.1334000 -0.0179410 -0.0232920 0.2328100 -0.0319050 -0.0264410 -0.0264410 0.3288400 0.3288400 0.3419300 -0.0246610 -0.0246610 -0.0310860 -0.0310860 -0.0310860 0.0447150 0.0438650 0.7480300 -0.0224690 -0.0235660 0.3206000 0.3206000 0.3206000 -0.0018014 -0.0018014 -0.0018014 0.5763900 -0.0186280 -0.0186280 0.0066653 -0.0179410 0.2576200 0.2328100 -0.0319050 -0.0319050 -0.0264410 -0.0264410 -0.0264410 1.1106000 1.1190000 0.3288400 -0.0324310 -0.0324310 -0.0221950 -0.0076101 -0.0246610 -0.0405630 -0.0310860 -0.0310860 -0.0310860 -0.0310860 0.0447150 0.0438650 0.0438650 0.7480300 -0.0224690 -0.0235660 1.5140000 0.3206000 0.3206000 -0.0548250 -0.0018014 -0.0018014 0.5782600 0.5491200 -0.6222600 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 0.000 9.1310943 13.0321009 5.4092348 9.6503978 3.6722669 10.8819039 0.9173936 -0.4975676 8.5951023 7.9145621 1.8242791 8.0716688 2.8242791 10.3243847 8.7620883 0.5023306 9.9514937 10.0972916 9.8321414 9.6863939 9.6625568 7.7327658 10.2561189 3.4409389 9.5385188 8.9699505 5.0154128 NA 10.3882956 3.5023433 11.8547564 11.6742516 7.4584788 10.0844870 7.8686670 8.7977312 5.8302731 3.7753667 -1.0825301 4.5320925 7.9397502 8.0061706 9.5594343 3.5320925 10.5984496 6.2482995 10.4246816 6.0569346 9.6030074 -2.0825301 10.2776810 1.5023306 3.9834679 10.6260095 6.5368688 5.2924210 9.1176683 9.0291704 6.1462011 NA 13.0074122 0.7247376 11.4677686 -2.0825301 8.0873074 4.4565433 8.8802787 9.2994661 11.381450 5.900377 9.986161 12.982294 10.801030 11.286298 12.516656 10.856962 9.159246 10.938883 13.640163 8.554913 9.284251 10.358771 1.376790 7.041504 11.745420 10.81711709 9.00418226 8.72554247 8.75737367 8.94666975 10.16798896 6.67893388 4.57559673 9.54992344 5.09729054 -0.08268282 9.69997129 7.96430216 12.69699933 10.33101052 8.46234685 7.96723087 10.56011116 6.38090777 12.31142716 10.50445683 9.82765058 9.29187863 11.51018994 10.07851444 10.41747756 9.21429872 9.43111019 9.81708694 6.13655029 10.91614922 8.25834555 10.40046770 11.16945661 7.57380773 12.95308377 9.90890445 10.30000655 13.22863419 10.04085737 9.77652910 2.37681824 TCGA-BH-A1EY 79 1 538 NA breast stage iia t2 n0 m0 female 2000 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 NA NA 1 2 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 9.363527e-07 5.201959e-07 10.23931533 10.02108769 12.01617098 9.38162536 7.83105131 9.86915981 10.57710182 10.28344481 9.17200714 13.26655446 11.26269447 10.31747095 5.78395161 12.19394332 3.87066063 9.37740078 6.75818856 7.90628754 16.08268341 12.88459079 -1.03622997 12.47131965 5.00816863 9.06180481 11.05982897 6.77112759 -1.03622997 10.38478558 9.41704341 2.13369503 7.31250091 7.43137809 NA 3.71865753 10.43086878 11.36278360 9.19978692 11.08627724 10.57848261 11.53505137 -0.03622997 10.60807967 14.01685013 8.48350746 9.57016879 11.01668038 10.51644189 4.21169754 5.23056041 9.05916976 11.62910868 NA 10.91067900 6.02986143 7.17322640 5.96377234 10.37634259 11.84354742 10.72947324 12.32941171 13.00131969 7.98891243 10.89598751 9.77294596 11.54967418 10.77313896 5.07229878 12.33132401 8.97079989 0.54873253 10.28061988 8.91942262 1.81377093 6.51066766 10.54025709 9.68743378 9.41395303 10.09369974 1.54873253 9.93962064 12.67705184 11.84851563 10.23465208 9.65813060 -0.51794000 0.00747380 0.52101000 0.01335300 -0.00210120 0.00041593 1.08510000 -0.52849000 0.00000000 0.00430210 -0.53134000 1.03120000 0.02272500 1.60330000 -0.00387790 0.01656500 0.01656500 0.00958830 0.00305220 -0.53916000 0.01964300 0.02820000 -0.49644000 -0.49840000 -0.50297000 -0.46557000 0.03045100 0.03990200 0.04344000 0.04060900 -0.51208000 -0.00041585 -0.52726000 0.01126100 -0.53358000 0.00458000 0.00458000 -0.52849000 0.00000000 0.00000000 0.00430210 0.00124810 -0.52338000 -0.51249000 -0.51249000 0.01992300 0.01992300 -0.52859000 0.02848100 -0.48565000 0.01656500 -0.52468000 0.04244900 0.00958830 0.00305220 -0.50784000 -0.52310000 -0.51476000 0.02820000 -0.49871000 -0.49644000 -0.49840000 -0.50960000 0.04340400 -0.48323000 0.03792400 0.03312700 -0.49308000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 -0.154 9.49612875 13.27431454 0.54873253 9.70523978 3.82175103 11.07849116 3.42320165 NA 8.03523514 9.10715586 -0.03622997 7.69780509 5.60762918 10.76830716 8.85707436 3.60762622 9.95174732 9.87516478 10.94534002 11.11288476 11.22331303 7.26755359 9.91359943 2.77112495 5.42320501 9.50680463 2.54873253 -1.03622997 10.16037493 1.54873253 12.13963413 13.13916636 8.65900118 10.77273693 8.58765415 8.84946922 3.91796634 2.42320165 1.28569813 9.53552540 7.85251578 9.12616420 10.95103674 4.39003479 9.37497642 8.03255106 9.81161312 6.16344439 8.95529449 0.96377003 9.90702013 3.91796634 3.48733199 9.78776089 7.67839591 2.96377003 9.69084238 8.87965217 4.45562313 -1.03622997 13.13424554 0.96377003 10.10204459 NA 6.94105230 4.24917225 8.05652988 8.33227918 12.0502407 6.3984017 8.9651808 12.1939433 9.3752838 10.0472521 12.8845908 11.2143673 9.1889802 10.9428406 12.6378546 8.3235223 9.0591698 8.9106790 0.5487325 6.8585903 11.5576307 10.897463 5.705240 8.791909 7.958126 7.567399 10.488657 7.187775 9.787936 11.262694 5.809263 -1.036230 7.082714 7.209754 10.836063 10.857074 7.285701 8.163445 11.322699 6.864639 12.889423 9.199787 9.945340 9.391086 12.341254 9.583992 10.477007 9.098199 NA 9.126303 5.338813 10.910679 8.596768 12.329822 10.376343 7.061805 12.570053 10.687434 10.289640 12.101404 10.830279 9.917242 5.153599 TCGA-BH-A1F0 80 1 785 NA breast stage iia t1a n1c m0 female 2000 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 2 4 NA NA 2 5 2 2 2 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 10.6193694 9.7762167 11.0612287 10.0394280 8.9339408 10.1071050 8.3064865 10.6098701 10.5498673 11.9498720 10.4689872 10.4321806 1.9528554 11.6948781 4.3375113 10.3620046 4.5642867 9.0642750 10.4692061 7.7371209 NA 8.0260985 8.3035433 9.6860531 9.8733677 5.8597410 -2.2169206 9.2133769 9.9718223 1.7829117 8.8252679 8.5336315 -2.2169206 6.5610022 10.3990137 10.3851593 9.3064865 10.5965052 10.5506950 11.3565716 0.1048734 11.2883639 14.6757874 7.5595874 9.2448949 11.3241421 11.4031442 4.2747760 NA 10.2500205 11.1522491 -0.2170883 11.3712877 7.5477961 8.4240730 6.8436209 11.6045988 11.7658289 10.2840152 11.3729266 12.8693510 6.0821320 10.8317519 10.6460479 11.6051965 11.1108980 4.9326707 12.2324600 9.1923153 0.3679301 10.5537948 9.8104849 3.2095313 7.6883112 9.5704189 9.9850482 10.6798244 10.6523255 2.6408985 6.5934957 12.8913264 12.9387704 9.5269172 9.5138190 0.1646700 0.1646700 0.2621600 -0.0164920 0.1306600 0.2019400 0.1663600 0.0164250 0.3636200 0.1257900 0.1257900 0.0183830 0.4990900 -0.0305400 0.0864340 0.0864340 0.0864340 -0.0769450 -0.0769450 -0.1179300 -0.0918160 -0.0758480 0.0555150 0.2797900 -0.0986820 0.0349590 0.0349590 -0.0278710 -0.0031859 -0.0339100 0.1646700 0.0580220 -0.0164920 -0.2327600 -0.2343500 -0.2392100 -0.2208400 0.0164250 0.0164250 0.0445740 0.0862330 0.0862330 -0.1930000 0.4510500 0.4510500 -0.0503700 -0.0503700 -0.0305400 -0.0305400 0.0864340 0.0864340 0.1114500 0.1209300 -0.0769450 -0.0769450 -0.0769450 -0.0239770 -0.0918160 -0.0666540 -0.0392260 0.0555150 0.2797900 -0.1044400 0.0349590 0.0349590 -0.0031859 -0.0118870 -0.0325870 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.252 0.252 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.252 0.252 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 0.108 10.1208251 12.5875596 4.4971716 9.5189035 5.9035252 10.5502813 5.6094743 7.7342090 8.6354540 9.0225229 NA 8.7105024 4.9528507 10.9564454 9.2387654 0.5902427 10.4568960 10.1541566 7.3317464 8.5419806 8.7709344 7.3809770 11.6508788 5.2258687 8.9352093 9.7210337 5.6158135 NA 10.8575676 1.9528554 12.8883419 11.9245526 9.1784585 10.5712349 11.4061201 9.2201563 6.3565717 4.5108480 NA 0.1048734 8.2081402 9.4420285 9.6260603 6.8756818 7.3155726 5.7017875 9.9739836 6.4553502 10.5239700 6.7602050 11.4617446 3.9528461 6.4729231 9.8716464 7.1668881 9.3641250 9.4209076 10.4170548 10.1410262 4.0308481 13.3081087 0.7829117 10.3753815 -2.2169206 9.4685493 5.7716083 8.4711749 8.8842435 11.115800 7.854387 8.785036 11.694878 10.050881 10.339909 7.737121 10.301086 9.328072 10.783629 13.876631 11.401654 10.250021 7.780104 4.068327 7.451810 11.638280 10.671287 6.415919 9.672809 8.297639 9.888833 10.061632 8.250530 7.107105 10.468987 5.843620 4.972748 6.149247 8.393894 12.319779 11.259418 8.142103 7.941534 10.763064 9.847667 10.417699 9.306486 10.401769 9.663656 12.071358 10.978450 10.457558 9.514243 6.531118 9.632697 10.362240 11.371288 6.561002 10.679300 11.604599 7.844971 13.958766 10.392103 11.000428 14.058140 9.964698 9.776571 5.095806 TCGA-BH-A1F2 53 1 959 NA breast stage iiib t4b n1b m0 female 1999 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 10.8999186 10.0130858 11.1667951 9.5268904 9.4221352 9.9997929 7.6301280 10.6214751 9.6505766 13.1908620 10.9162153 10.6772184 2.8138325 15.3145197 4.3777415 9.2269162 3.8138427 8.9287141 8.7781182 13.1592936 NA 13.0919360 2.6825958 9.1881237 11.0083829 7.5710488 1.8752296 6.2210148 10.7345166 1.2903064 5.6301288 7.8294367 -1.7098115 3.9627063 10.4250254 11.5011017 8.7165431 10.5241974 10.1633377 11.3058674 5.2091414 9.0164963 13.5920601 7.4166472 8.5547208 10.5756804 11.0763436 4.8901889 -0.1246917 9.3502986 11.8093000 0.8752296 11.6124880 6.0518289 6.7821307 4.1231695 11.2202762 11.9659045 9.3922539 12.4476251 13.3756676 7.4652040 10.9776539 10.8070246 11.8673529 9.8381366 4.8601335 12.4626275 9.5238979 -0.7098115 9.8672349 9.0732764 2.1971734 5.4997311 11.1259339 10.5997545 9.9582768 10.4770114 3.0976277 8.4272693 13.7830076 13.0785377 9.8270111 9.1247492 1.1885000 0.0931850 0.6273300 0.0754150 0.0734020 0.0037465 0.3743000 0.3813800 -0.4178400 0.4996000 0.4996000 1.2432000 0.3645700 0.3746700 0.3716600 0.3716600 -0.4587200 -0.0151910 -0.0151910 -0.0407520 0.4092800 0.0431570 0.4116200 3.6569000 0.7248900 -0.0634350 -0.0634350 -0.0634350 1.0870000 -0.8276500 1.1885000 0.2393800 0.0754150 -0.0459060 -0.0048461 -0.4276600 -0.4276600 0.3813800 -0.4178400 -0.4412200 -0.0245240 -0.0341620 -0.8711900 -0.4252700 -0.4252700 0.3448600 0.3448600 -0.4229800 -0.4465900 0.3716600 0.3716600 -0.4390600 -0.4390600 -0.0151910 -0.0238070 -0.0238070 -0.0407520 -0.0465830 -0.3699700 -0.4275700 -0.4388600 -0.0920810 -0.0410240 -0.0634350 -0.0634350 0.3357700 -0.8598700 -0.0628980 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 0.000 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 0.000 7.5547208 12.6071253 9.2746966 9.5594048 2.2902769 10.4642675 -0.1246917 -0.7098115 7.3291972 7.9484899 NA 9.5860471 2.6122109 11.1947246 8.8771178 1.6122109 10.1088604 10.0613549 8.4948492 8.7781182 9.4828485 7.8563321 10.6823272 1.7003509 7.2239689 9.2682734 1.0976108 0.8752296 11.5091441 2.1971734 11.7512459 11.0397286 8.5974790 10.4243835 8.4131062 9.2016701 7.6456296 1.6122109 NA 4.4400220 6.7165424 5.5190984 11.1042597 6.6256679 7.0130859 4.6996682 9.8366904 5.8752394 10.4095436 NA 10.2881632 2.7497059 4.4602052 9.9679670 6.4131574 -0.7098115 8.5382056 9.3264517 1.9907008 NA 12.9287706 0.2903064 9.1490363 NA 8.8157989 5.3455596 8.8966833 9.1128489 11.786739 6.647830 9.280382 15.314520 9.810897 10.856094 13.159294 11.317147 8.657693 10.647555 13.895700 10.304647 9.350299 9.847263 NA 8.686883 12.384356 10.7540580 5.6565993 10.4856504 8.4985126 8.9603768 10.6757766 3.6122109 8.5298768 10.9162153 6.5664027 -0.1246917 6.1850954 7.2272694 11.2326094 10.6601481 8.0650655 6.1911441 10.6579660 4.8601335 12.5350590 8.7165431 10.5788559 10.3309104 10.7918666 9.0699975 10.4595769 8.9565022 NA 7.9465063 2.7497059 11.6124880 8.9529465 9.7934082 11.2202762 6.7578833 13.7776472 9.6943553 10.7507340 12.5526667 9.8591842 9.2888686 1.0976108 TCGA-BH-A1F5 62 1 2712 NA breast stage iia t1c n1a m0 female 2002 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 11.5146843 10.4456569 12.1056297 9.6628670 8.9038752 8.5805593 10.6377301 10.0205471 8.2337716 13.7724176 12.1814022 10.7586381 2.3669236 11.5833336 4.0190080 8.6875737 6.3539954 8.7407316 9.0604211 13.9382128 2.8815080 14.8724268 7.3893018 9.7623153 11.2068129 7.0353127 -1.4402635 5.7883986 8.7847866 -1.4402635 6.9604584 7.9518966 NA 3.0831453 10.7763251 11.0048528 10.9510914 11.7676612 10.0831413 11.9787495 6.1594919 12.4243458 12.8091372 6.7384936 9.2832403 11.5072162 11.7705550 3.3669376 5.2874982 9.6377301 11.2708161 NA 11.3741618 7.8240219 5.8542002 3.5595775 10.9217971 12.1534372 10.0169602 12.4753653 13.3993244 7.5425730 11.6260049 11.2447748 12.3387857 11.0549347 4.8075043 12.6291130 13.1666784 -0.4404592 9.7112301 9.7524885 1.1469158 4.3409396 11.0423872 10.9761129 10.2733954 11.6015806 2.8815080 8.0634048 14.0010970 12.6395640 10.0875449 9.5239202 0.0000000 0.0000000 0.0000000 -0.0388030 -0.0766490 -0.0128040 0.0021282 -0.5288600 -0.8211100 1.6189000 1.6189000 1.6088000 0.0180110 0.0119140 -0.0046603 -0.0046603 -0.0046603 0.0082437 0.0021282 0.0062959 0.0107510 0.0076870 0.0324700 0.0324700 0.0324700 0.0238950 0.0238950 0.0238950 0.0156350 0.0000000 0.0000000 0.0075479 -0.0388030 0.0033776 -0.0128040 0.0021282 -0.0024457 -0.5288600 -0.5221200 -0.5399300 -0.0016152 -0.0016152 -0.8583400 0.0035165 0.0129820 0.0129820 0.0129820 0.0119140 0.0175920 -0.0021692 -0.0046603 -0.0046603 -0.0046603 0.0082437 0.0021282 0.0021282 -0.0045338 0.0107510 0.0076870 -0.8326500 0.0324700 0.0324700 -0.0192670 0.0238950 0.0238950 0.0156350 0.0038303 -0.8995100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 0.000 7.1816313 10.8012646 7.9668469 8.4649663 3.6888629 9.6209505 1.5595897 NA 7.3211308 6.5930026 NA 7.6523366 -0.4404592 10.5988411 9.5468433 0.5595408 7.6888622 9.6450517 9.5130483 9.7469313 9.5083116 7.7690325 8.3781613 -0.6084522 9.2874998 8.2372989 5.1889350 NA 9.7388664 3.6039764 12.1710652 11.4782562 7.7016863 10.7332565 7.8656411 8.6654876 5.1889350 NA -0.4404592 4.0514330 7.3893018 4.0831453 10.7469314 4.0514330 6.9606716 5.6363955 10.7376216 6.8815068 9.7376215 NA 10.3343664 0.1445685 4.1141671 10.3442100 6.0238386 4.2320083 9.0693542 7.0792160 4.7494055 NA 13.0890098 0.8815080 8.9259015 0.5595408 8.0251457 4.8815080 8.6523363 8.7859915 14.7471011 5.2320045 9.4299440 11.5833336 9.9259015 10.3552131 13.9382128 12.4955730 9.1686195 10.8941319 12.9641222 9.9631240 9.6377301 8.6377301 0.1445685 7.7269974 13.5817737 10.3470737 9.1360637 10.1975626 9.8015624 8.0948547 10.6017208 2.7295093 8.8003706 12.1814022 5.9259021 1.5595897 4.0514330 6.7497984 10.0241250 10.5840264 10.7090088 5.8904953 12.6071292 4.8633587 14.1133313 10.9510914 11.3833445 10.0423873 12.5201243 9.0322700 10.4825353 9.2934420 -0.4404592 8.0470574 5.7690338 11.3741618 7.6363948 9.9340755 10.9217971 6.8724619 13.0524339 10.7917004 11.2092845 11.9347545 9.4237653 9.8391899 3.3144645 TCGA-BH-A1F6 51 1 2965 NA breast NA t4d n2a mx female 1996 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 6.935946e-07 10.0354933 9.0458260 11.4023417 9.5391369 8.1749986 7.6834396 9.8989615 10.5872387 11.9327598 12.8821213 10.2722575 10.1667378 3.1631767 11.7453744 2.7226190 10.1542571 7.4582868 8.7047890 9.6069988 4.8925367 -1.0846703 8.4524739 6.7732368 9.2900776 10.4255251 5.7607452 -1.0846703 9.0263909 11.3563840 3.7732368 8.2528773 7.5663068 4.0445428 6.3990719 9.0976498 10.7181755 9.2064261 10.4988083 9.4650400 11.2728074 NA 7.7638783 14.6281585 7.2774185 10.2422465 10.5202719 10.2360559 3.5591124 0.5001902 9.1295746 10.4992784 NA 10.0845541 6.5077122 6.6567223 4.5299646 10.1440740 11.8140457 10.3762232 10.3925077 12.0198541 6.1820427 10.8134788 10.4254262 10.6113535 10.7634871 4.8459918 11.7583913 8.4698441 NA 10.3767348 9.5446119 2.3746778 6.3415197 10.9954067 10.1691029 10.3894683 10.3262367 1.7225972 5.5876800 12.7817616 11.9524591 10.3011178 9.1796979 0.0197830 0.2715900 0.2383800 -0.0875790 0.0625080 -0.3397000 0.2326000 -0.0146410 0.3715000 0.0736970 0.0736970 1.0403000 3.6569000 -0.0172540 0.2974000 0.0239870 0.0079175 -0.0718730 0.3841900 -0.4088100 -0.3473300 0.3339900 -0.3644200 -0.3644200 -0.3644200 0.0988510 1.8408000 -0.2458200 0.3186700 -0.0103700 -0.3422800 -0.3530500 -0.0750450 -0.3988600 -0.3353700 0.3135800 -0.3427400 -0.0146410 0.3713400 -0.0410240 0.2815300 0.5537200 -0.7962000 0.9904800 0.9904800 -0.0881090 -0.0881090 -0.3687300 -0.4201400 0.2875400 0.0239870 0.0079175 0.0079175 -0.0557060 -0.3668000 -0.3931900 -0.3396400 -0.3579500 -0.3678200 -0.0817380 -0.3644200 -0.3644200 -0.1817800 0.0988510 -0.2251500 0.3106500 -0.0099565 -0.0690640 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 0.000 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 0.000 8.4563520 12.2559400 3.5591124 8.5077126 2.0851867 10.4950427 2.2371966 8.2506457 9.4040997 7.2506461 1.2371966 7.6651916 2.5002157 9.9691813 9.1186035 1.5002412 7.5841402 11.5156329 8.1198267 8.5482505 9.2281725 6.9376233 10.7338376 2.7226190 9.6575648 10.0146032 6.0851803 NA 10.0732338 2.9152532 13.4425491 12.6480588 7.5698913 10.4000783 10.1826273 11.8502362 2.0851867 1.7225972 -1.0846703 0.5001902 8.6516574 8.7513057 7.8867989 3.8694470 8.5595805 7.5373069 10.1186033 6.2551060 9.5663072 1.2371966 10.6520801 3.4388118 5.0650035 10.5170261 8.1698118 7.8606990 8.9110225 8.8146123 9.1038443 6.2371832 13.1357849 1.2371966 11.0309493 NA 10.2978794 7.3498836 8.5859116 8.6087424 10.657565 10.105080 8.454414 11.745374 9.822897 11.375967 4.892537 11.689631 8.922283 9.849683 13.329809 12.702342 9.129575 7.948679 2.374678 7.034196 10.743392 10.769345 5.709671 9.375711 8.756033 8.403096 9.848363 6.551880 6.349884 10.272257 10.475588 NA 8.511445 10.266261 12.107086 10.096408 8.107548 9.146477 8.283762 8.072602 10.852820 9.206426 10.317735 10.370069 11.837282 11.062460 10.555048 9.239436 7.442732 9.804508 8.743392 10.084554 5.857770 10.933456 10.144074 6.676806 13.783306 10.997404 10.653348 12.551427 11.588123 9.169103 3.500216 TCGA-BH-A1F8 89 1 749 NA breast stage iiib t4b n2 m0 female 1999 NA NA infiltrating ductal carcinoma 12 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.225215e-06 1.005712e-06 10.0182517 10.8722295 11.1130834 9.8872947 8.8842059 10.2983597 8.9724480 10.0422040 7.5032183 14.4565052 11.0481305 10.3723436 -1.7888632 12.3632609 3.5684456 7.0750833 6.0812608 8.1650929 6.2877124 12.7172663 4.5328219 13.3797647 2.2108875 9.0222715 11.2660097 5.9113369 -1.7888632 5.9388174 11.0077476 -0.7891125 7.1534112 7.9113363 -1.7888632 3.8547537 11.3573063 11.2388028 10.2759763 11.3396967 10.9298577 13.2580207 NA 11.7199295 13.5718467 7.0182514 8.6139088 11.1041983 12.2035696 3.5684456 3.6371581 9.7265966 11.6646818 NA 11.0008379 5.4203510 5.3401813 2.2108875 10.9464528 11.6304620 10.0996400 11.3049745 13.6531600 8.2675344 11.0824171 10.1233483 11.9874326 10.1545104 5.3298376 12.2017985 11.4533266 NA 10.0665440 9.6957197 1.9700438 4.9113369 10.7599594 10.5401325 10.0916282 10.6279581 4.2552892 9.2010008 13.2143268 11.3248017 10.2893812 8.5451699 -0.7559000 0.0047171 0.0555130 -0.7491600 0.0410320 -0.7485700 0.0285550 0.0358040 0.0323800 3.6569000 -0.7664600 0.0383460 0.0516700 -0.7463800 -0.0310310 0.1086200 2.9430000 0.0319980 0.0319980 -0.7664600 -0.7645700 0.0406070 -0.7769400 0.0119560 0.0119560 -0.7358200 0.0051340 0.0000000 0.8223500 -0.7559000 -0.7559000 -0.0045714 -0.7491600 -0.7485700 -0.7411600 0.0285550 0.0285550 0.0358040 0.0323800 0.0723950 -0.7602100 0.0532110 -0.7820400 -0.7572000 -0.7572000 -0.7572000 -0.7572000 -0.7463800 -0.7592600 -0.0121640 -0.7208400 -0.7206600 -0.7082800 0.0319980 0.0319980 0.0319980 -0.7650100 -0.7645700 0.0406070 -0.7469900 -0.7769400 0.0119560 -0.7586600 -0.7358200 0.0000000 0.7995600 0.0270740 -0.7550400 -0.746 -0.746 -0.721 -0.721 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.776 -0.776 -0.757 -0.757 -0.611 -0.611 -0.746 -0.746 -0.721 -0.721 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.776 -0.776 -0.757 -0.757 -0.611 -0.611 7.5772188 11.7585143 8.2010006 7.8493325 1.9113464 10.6316465 0.2108875 NA 8.0719836 7.5462872 0.7958500 8.2740356 2.3808126 11.5026431 8.1192892 -0.7891125 7.1853116 10.3304864 5.5859360 9.1730697 9.7627924 7.8511419 8.9328505 -1.1019078 4.9388174 8.8024191 NA -1.7888632 8.9173927 2.9657843 11.5003393 12.2036581 7.6846028 11.1357093 12.1360803 9.5328248 7.2715928 1.3808403 NA -1.7888632 6.7422784 5.0563884 9.7745698 3.2552892 7.9632441 7.6579801 10.5568563 6.3504477 9.9836237 NA 9.6010658 2.2108875 4.1177865 10.5696331 5.9890391 5.2877124 9.4367068 7.4540706 7.2249172 NA 13.4056536 1.0182781 10.4890558 NA 8.3770600 4.1177865 9.0429956 8.7127340 13.310980 7.786436 8.359374 12.363261 9.103440 11.292380 12.717266 10.348849 11.150109 11.195849 12.744105 9.820537 9.726597 8.390806 NA 8.368244 11.808600 9.545729 8.571744 9.071984 7.950677 9.772185 9.561875 3.255289 8.067322 11.048131 6.734459 2.670319 3.340178 6.941808 9.782175 9.133481 7.670328 7.096593 12.825434 5.904383 12.180913 10.275976 10.442418 9.224220 12.480170 7.780752 10.188534 9.282359 4.420348 8.291754 6.249815 11.000838 8.098117 9.591358 10.946453 6.792098 12.181182 10.336310 10.723637 12.959352 8.714723 8.814523 1.532816 TCGA-BH-A1FB 60 1 3669 NA breast stage iib t2 n1b m0 female 2000 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0299698 10.3497903 11.7481830 10.3799746 8.3799748 9.3989162 10.0307797 10.0408642 10.1018628 12.9853938 10.6957886 10.6002773 1.8164768 12.3857624 4.5534281 10.1611263 5.5443803 9.3678485 10.0157239 12.3523839 4.5168976 12.6487572 6.8897096 9.4266858 10.8383659 6.7511343 NA 11.5426688 9.0722760 2.5534342 8.4026749 8.1458832 0.2315553 5.7783926 10.2517836 10.3923150 10.2037600 11.4356106 10.4838679 11.9420893 9.8906020 11.2258515 14.6664357 8.3079530 9.4530852 12.0070055 11.6610355 5.3400210 3.4014257 9.8603992 12.5908358 -1.7685676 11.5764874 6.4935929 8.0754192 5.4311716 10.5846449 11.7594637 10.1436389 12.4673627 13.0655246 7.6021852 11.2493504 10.9949469 11.5867115 11.4216314 5.4311716 12.0515773 11.8406768 -1.7685676 10.3403492 9.7303472 3.5461907 6.2704168 10.8091629 10.6561892 10.1022480 10.5959063 4.2315015 8.5215168 13.8093104 13.2616910 9.9210593 9.2948932 0.00194180 0.00194180 -0.00235530 0.00291330 0.00016166 0.00000000 -0.02288100 0.00000000 0.00000000 -0.19149000 0.34177000 0.34177000 0.00097064 0.00097064 -0.00563430 -0.00563430 -0.00563430 -0.00290910 -0.00290910 -0.00415460 -0.00025454 0.00833510 -0.01105200 0.00416320 0.00416320 -0.00622860 -0.00622860 -0.00622860 -0.00470790 -0.00512270 0.00194180 0.00527490 0.00291330 -0.00678580 0.00000000 -0.03142100 -0.03142100 0.00000000 0.00000000 -0.00215010 -0.00401620 -0.00401620 -0.19149000 0.00432520 0.00432520 0.00432520 0.00471900 0.00097064 0.00097064 -0.00563430 -0.00563430 -0.00563430 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00415460 -0.00025454 0.00833510 -0.18169000 -0.01105200 0.00416320 -0.00041585 -0.00622860 -0.00622860 -0.00470790 0.00097064 0.00166420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 0.000 10.4179218 12.7971357 9.3652824 9.9996824 5.6744409 10.2642326 5.2975876 1.2314939 8.0128580 9.2607853 -0.1836051 8.5528961 3.9863836 9.9901377 9.0508788 3.2314939 10.4482439 9.5923451 10.1721787 9.7535892 9.2620065 8.3799748 10.4561027 4.0894812 9.7173274 9.9517424 5.8388283 NA 10.3960908 4.8462075 12.9926857 11.9285742 8.7432507 10.5312784 8.4188502 8.8498836 6.4794262 1.9319477 2.0388576 1.8164768 8.4385124 8.5375597 9.8526342 6.0323984 8.1094415 6.1202420 10.3006121 6.5713476 9.7158175 -0.7685676 11.2119947 4.9594178 5.2975876 9.6350907 5.0329163 7.2510885 9.7486752 8.7442385 7.7956475 -0.7685676 13.7358826 1.5534097 10.1637128 NA 8.4385124 5.3295291 8.1577941 8.8126988 12.216003 4.831411 9.005461 12.385762 10.534217 10.125558 12.352384 12.075419 9.335441 11.348329 13.554201 11.217340 9.860399 8.322934 -1.768568 7.743250 11.155011 11.242900 7.098776 9.372328 9.105711 8.192948 10.372075 8.200165 7.668210 10.695789 6.431170 6.360780 6.812698 6.745423 12.553215 10.777910 8.841600 7.849884 12.114237 8.410163 11.440548 10.203760 10.524107 9.606538 11.825239 10.183875 10.531565 9.674442 6.842523 9.465238 7.831411 11.576487 8.203042 10.944240 10.584645 7.371049 14.054641 9.988888 10.602458 13.314146 10.306977 9.917561 2.875348 TCGA-BH-A1FC 78 1 3472 NA breast stage iia t1c n1b m0 female 1998 NA NA medullary carcinoma 1 black or african american not hispanic or latino NA NA 5 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.907385e-06 3.81477e-07 11.1043968 9.4155265 12.4007664 9.6533755 8.8048512 8.5157665 8.2983907 9.6143742 11.2479694 12.0908376 10.5073339 10.5614252 2.2349917 10.8190187 2.7585590 9.4888431 7.3037744 9.2293493 9.0261588 5.1418864 NA 7.0358955 8.7288511 9.2321753 11.1549764 5.9898838 2.6273033 11.8498206 11.8047327 0.5568953 11.2199482 6.6358748 2.5569198 7.5227078 9.2328809 10.6248960 9.7953286 10.9988306 9.2243903 10.7746392 -0.1800049 10.2000585 14.2396332 8.6727895 7.8086431 12.0495782 10.7064169 3.4829257 -1.7651308 9.3057875 9.6969866 NA 10.5552322 4.2122736 7.5837237 6.3847423 8.3264313 12.3605707 10.6698846 11.0655110 12.4221932 5.1418864 11.6168091 11.2855332 11.5484457 11.6401372 5.4149034 12.1626811 9.6959635 -1.7651308 9.9140360 11.1396304 2.3250122 5.8423252 8.8761443 9.2058206 11.2911254 10.5784591 2.6273033 4.7427877 12.7455127 11.3909207 10.4962092 8.6024105 1.977100 1.880100 1.303300 0.164900 0.134650 0.213300 -0.519180 0.781760 -0.200000 1.002200 1.002200 1.459200 1.491600 -0.178730 -0.529810 0.195880 0.195880 0.174680 0.153050 -0.511660 -0.183330 -0.530420 2.550100 0.144880 0.586320 0.848690 1.116400 0.089996 -0.158350 1.471800 1.823300 -0.175750 0.163700 0.350390 0.270480 -0.213170 -0.225520 0.903510 -0.200000 -0.187730 -0.069198 0.144440 -0.954570 0.871050 0.871050 0.871050 1.150600 -0.165610 -0.147470 -0.529810 0.195880 -0.539660 -0.539660 0.155020 0.153050 0.302980 -0.879300 -0.172650 -0.522460 -0.525320 0.131030 0.144880 0.013353 -0.552360 -0.244720 -0.545980 0.538370 -0.539970 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.586 0.586 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.038 0.235 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.586 0.586 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.038 0.235 9.5642314 11.8628716 1.8199542 9.4529535 2.0423642 10.6657096 1.5569444 0.2349917 9.2406203 9.1351077 2.4829257 8.3435202 0.2349917 10.5633902 9.7363353 3.9074195 3.4049167 10.1478851 6.9074207 10.1263998 8.6077194 6.6862064 10.1712656 2.3224474 10.4226571 9.4401782 2.1418905 NA 8.7157860 2.0423642 12.3237840 11.9385749 7.8552155 9.5563602 8.9171125 10.7595375 3.4049167 2.8199542 NA -0.7648857 9.8575052 8.6401372 8.2970419 -1.7651308 7.6614282 7.8143120 10.6010447 4.2122736 10.9749873 -0.7648857 13.0417468 5.4829225 4.0423467 9.7889993 5.8882002 9.5313384 8.1433883 7.7702714 11.1986143 6.0097838 14.0252424 -1.7651308 10.5617061 -1.7651308 9.7318495 3.1418905 8.3277529 8.0064854 11.342440 8.850625 8.518084 10.819019 9.577626 12.162218 5.141886 10.303774 9.157580 10.765158 14.894128 14.023663 9.305787 8.370705 3.092969 8.186281 11.584830 12.0404373 6.8274532 8.3796539 9.2448243 9.4011588 11.6752719 7.3898137 6.5064591 10.5073339 10.6345407 0.5568953 2.8199542 9.8833309 12.2498880 12.3471094 8.9206205 8.3224586 7.6165386 9.7962837 10.5655093 9.7953286 10.3885478 10.2090518 11.8322336 12.6792989 11.4265177 8.3077983 NA 8.9921107 10.1516217 10.5552322 6.4734005 12.2528098 8.3264313 8.4674168 14.3588343 11.8843642 9.8062744 13.1803939 11.0415454 10.0527789 5.8124238 TCGA-BH-A1FD 68 1 1009 NA breast stage i t1c n0 m0 female 1998 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 2 NA NA 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 10.5028180 9.8549371 11.9718386 10.1669815 7.9523324 8.7707461 10.2022147 9.6103097 8.8742360 12.2596586 11.0859530 10.2933916 2.6065607 10.7637843 2.3017047 8.4466611 6.2310483 8.0070306 8.5054110 12.5852681 -0.7858752 12.9262835 6.3639875 9.4460794 11.3297716 8.1986587 2.3017047 10.6654513 9.8404055 0.2142492 9.0487114 6.5805631 NA 3.3841604 10.5965941 11.2315706 9.5734408 10.1064035 10.6212424 12.1231957 0.7991702 10.8234190 14.1459934 7.2077162 10.8259567 11.0691086 10.1181221 3.7378057 5.9691275 9.1203792 10.9550750 -0.7858752 11.5909083 6.3331822 6.3383620 5.5805616 10.0726098 11.6538114 10.3204760 12.3893219 13.2980519 7.3227646 10.8888739 10.3950973 11.5133051 10.8569689 5.3017047 11.7229016 11.0609059 1.0216219 10.4606839 10.9425859 2.6072474 6.2421471 11.1455318 10.1364529 11.5451571 10.3221111 6.7649870 9.6823551 12.1838965 11.4729535 10.0419798 8.8553890 0.0324020 0.6368000 -0.7904400 0.0841890 0.0000000 0.0062286 0.0331070 0.0286020 -0.7873900 3.6569000 0.8555800 3.6569000 0.1458200 -0.0943460 0.0432790 0.0432790 0.0432790 -0.0226960 0.0088725 -0.7797400 0.0503720 0.2042500 -0.7436100 -0.7727900 0.0432790 -0.0442990 -0.0442990 1.4371000 0.0129150 -0.7822800 0.2155800 0.1875000 0.0841890 0.0196230 -0.7734700 -0.7973800 0.0165460 -0.0080437 -0.7873900 -0.1785500 0.8360600 -0.0248170 -0.6634800 0.0200430 0.0200430 -0.7689500 -0.7689500 -0.0943460 -0.0943460 0.0468220 0.0432790 -0.6661300 -0.6259000 -0.0226960 0.7711500 0.7398500 -0.1933900 -0.7716000 0.0121550 -0.7532400 -0.7841300 -0.7727900 -0.0744290 -0.0442990 -0.0442990 -0.8067200 0.0271970 -0.5931300 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.773 -0.773 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.181 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.773 -0.773 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.181 -0.345 8.1626073 13.0378065 6.4188106 8.5282568 4.0722173 10.4603870 -0.7858752 NA 8.4633535 7.2393799 NA 7.9637244 3.1684334 11.1056442 9.6038717 -1.7858752 7.1420182 9.0045887 9.4786829 9.7802942 9.1396537 6.8866660 10.0718325 2.3017047 10.4151388 9.2668083 1.6736921 -1.7858752 9.6092388 0.5361524 12.9514876 12.2536734 7.0597306 9.0296235 9.8531286 9.9894389 4.6236328 1.0216219 0.7991702 7.3563472 9.4273445 8.5706921 10.2867078 2.2142492 7.3915847 6.2803291 9.6415531 6.9146805 9.5601998 -1.7858752 10.6633888 3.7688301 3.7378057 10.1063732 7.1635420 0.7991702 9.5259886 7.9215994 9.8800203 0.2142492 13.7397305 -1.7858752 10.1431287 NA 9.1113292 3.7060884 7.8831253 9.0078436 13.421947 6.418811 8.508861 10.763784 9.737802 9.785045 12.585268 11.813107 9.326680 11.216000 13.432993 11.944073 9.120379 7.239380 1.536152 7.153820 11.845076 10.1961643 7.4454610 9.9133788 9.6336737 8.3766316 9.0516160 6.3435233 4.6899756 11.0859530 8.0799732 6.6571841 7.3096373 7.7776847 10.2373015 9.4460614 7.7259926 8.9824247 13.3219886 4.0215952 12.3318200 9.5734408 10.0324230 10.0884532 11.0238074 8.7407394 10.0017347 9.1857838 5.3537926 8.5286080 2.9146793 11.5909083 8.0232043 9.7856184 10.0726098 7.9319164 13.8911615 10.0834485 10.2435275 12.3274940 10.2678267 8.6869312 0.5361524 TCGA-BH-A1FE 31 1 2273 NA breast stage iib t2 n1 m0 female 1998 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 10.9817247 10.5329900 12.1906587 10.3444230 8.1762899 9.9007086 9.6995017 10.1378341 9.7060297 13.6428783 10.7355016 10.6988004 1.5669612 12.8179416 4.3929150 8.9747906 6.0617071 8.8839449 8.3589944 12.4327470 0.9148706 13.5662068 4.0617071 8.8481359 11.3400826 5.2470616 0.1075540 8.2559883 10.0732961 4.2774343 10.0400957 8.1159405 -0.8924460 4.8079525 10.6103436 10.7233714 9.8096845 11.9317745 10.2852428 12.2281547 11.5538198 10.1061023 14.7125862 8.9339650 9.7226817 11.7126441 11.9969207 4.6310752 4.1949774 9.9019278 11.9469125 -0.8924460 11.5919571 6.6466710 7.8557045 4.5337751 10.4220950 11.7537330 9.6702312 12.5920830 13.1539964 7.5316778 11.3306085 10.6917862 11.6655738 11.4408069 5.6388934 12.2933939 11.9069958 0.1075540 9.8888715 9.6118343 2.6936765 6.4473626 10.7261268 10.1025723 10.1597402 10.4420644 4.0847956 8.8937814 13.4551678 12.7489427 10.3426285 8.9530018 -0.1458100 -0.1458100 0.0084743 -0.0679930 -0.0679930 0.0000000 -0.1634500 0.7047600 3.5828000 -0.1705600 -0.1637000 2.1159000 0.0252500 0.0111210 0.0158660 -0.0290740 -0.0290740 0.0192230 0.0192230 -0.3934100 -0.0790770 -0.0487480 -0.3883900 0.0171240 0.0171240 -0.1380700 -0.1380700 -0.0914200 0.7742500 -0.1541400 -0.1458100 0.0101780 -0.0679930 -0.0240590 0.0000000 -0.2072800 -0.2072800 0.0334080 0.2373600 -0.1411600 0.0066653 0.0066653 -0.1349700 -0.0746780 -0.0746780 -0.3489300 -0.0026322 0.0111210 0.0111210 0.0158660 -0.0290740 -0.1874800 -0.1874800 0.0192230 0.0192230 0.0192230 -0.3877200 -0.2627600 -0.0487480 -0.3765100 -0.3883900 0.0171240 0.0043021 0.1411700 -0.0914200 0.0210480 0.0304510 0.0318590 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 0.000 10.2361507 13.0830016 8.7666157 9.7931367 5.5002571 10.7944500 4.4825515 1.6924718 7.9132557 9.1243201 0.1075540 8.9853558 1.2774492 10.4356257 8.8191789 2.7513780 10.8779693 10.1138379 9.4429022 9.0536870 9.2823814 8.4395483 10.3657834 3.7222256 8.0675140 9.9557435 5.9654934 NA 10.0408337 3.3169711 12.6865331 12.1727596 9.0740173 10.3260751 10.0200269 8.9292859 7.1682078 0.9148706 1.2774492 2.6310810 8.0426766 6.3696061 10.0682378 4.9778752 8.6125792 5.6621001 9.6985666 6.6849407 9.6990341 NA 9.9893905 3.9654888 4.7222201 9.9774102 6.2069128 6.3411318 9.3992581 8.1976241 7.7295636 -1.8927139 13.4916210 1.4294285 9.5237815 NA 8.0847919 5.4473610 8.0573387 7.1789745 12.303759 6.499830 8.925295 12.817942 9.728190 10.364310 12.432747 11.656093 9.437308 11.363721 13.521503 11.350090 9.901928 9.527998 NA 7.331514 12.315899 11.385671 6.769290 9.069685 9.501439 9.944351 10.473987 7.619265 7.247064 10.735502 4.821756 5.533775 6.478198 7.729912 12.323424 10.749564 8.577153 6.821757 12.182489 7.840527 13.092956 9.809685 10.675706 9.901521 11.326226 9.310248 10.953198 9.548900 8.027865 8.523486 7.988626 11.591957 8.145059 11.064654 10.422095 7.644730 13.695699 10.109624 10.354549 13.091797 11.258052 9.800127 2.355439 TCGA-BH-A1FG 88 1 3738 NA breast stage i t1c nx m0 female 1998 NA NA infiltrating ductal carcinoma NA white not hispanic or latino NA NA 2 3 NA NA 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 10.4302698 9.6006600 10.9845751 8.7965160 9.6459561 9.3322020 10.0764848 9.0264842 9.4014265 14.0457177 11.3405325 10.4682228 2.1276333 12.8043960 1.8646121 9.9799003 6.6459567 8.0365237 10.1049108 13.2537438 2.7125958 14.0703595 2.1276333 9.4397499 11.3692169 7.9435481 0.1276333 7.7834599 8.7435671 0.1276333 7.1163159 6.6667893 NA 2.5426790 9.7349612 9.8303807 9.7762881 11.1476849 9.7953338 10.8088693 0.1276333 12.6962996 13.7499878 6.7001165 9.1285697 10.5174415 11.1899019 2.4495614 4.9002196 8.9187938 11.2261016 -1.4571972 10.8112103 4.3240257 4.5426667 3.4968586 10.5402007 11.6944777 10.0866669 11.9972247 12.7147052 7.8913967 10.8152982 10.6799798 11.4605998 10.2296065 4.2150961 12.5189640 11.6057263 1.7125958 10.1425812 9.8510074 1.7691793 4.5870649 10.1346581 10.4168813 10.6151360 11.3940270 1.3500446 8.8969178 12.5476788 11.4072415 9.7435670 8.8836312 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 -0.00761010 -0.00346270 -0.00443120 -0.04793600 -0.90449000 2.94200000 2.91690000 0.02132300 0.00973770 -0.00304750 -0.00083160 -0.00083160 0.01279500 0.00097064 -0.00567570 -0.05671200 0.02146300 0.86572000 0.86572000 0.86572000 0.01433000 0.01433000 0.01433000 0.00069327 0.00777830 -0.00567570 0.00097064 0.00000000 -0.00761010 -0.00830050 -0.91026000 -0.00567570 -0.00443120 -0.04793600 -0.04793600 0.00221930 -0.00761010 -0.90449000 0.00263570 0.00263570 0.00263570 0.00680440 0.00973770 0.00973770 -0.00304750 -0.00083160 -0.00083160 -0.00083160 -0.30545000 0.00097064 0.00097064 -0.00567570 -0.05671200 0.01642300 -0.91793000 -0.88031000 0.86572000 0.08782400 0.01433000 0.01433000 0.00069327 0.01363200 0.02820000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 0.000 7.3596521 10.6783777 4.2150961 8.5884279 2.2771218 10.0259803 0.5427038 -0.4573952 7.9478099 6.6407005 NA 5.9856120 1.7125958 10.8295149 9.0284976 1.1276333 6.9089906 8.3108527 9.5594767 11.1462947 9.6269585 8.0623047 9.6796595 2.6301259 8.4022033 9.2534748 3.8645923 3.5426667 10.1941686 3.0662270 13.4890264 12.4718343 7.2291687 11.1099115 9.7355775 9.7392704 2.0020904 -0.4573952 NA 0.8645725 9.1874261 8.8880735 11.1006106 4.0972568 7.7718717 6.4555574 10.4195690 4.6301317 10.5475910 NA 11.0755113 -1.4571972 2.7906052 9.9505840 5.1504419 2.9349882 10.1792930 7.1276312 5.3500233 NA 13.7935219 1.1276333 9.9799003 1.3500446 8.5341900 3.8645923 8.3612508 9.7175940 13.314419 4.297558 9.267182 12.804396 10.243975 10.498318 13.253744 12.314261 9.320746 10.403367 12.132671 9.674525 8.918794 8.783460 -1.457197 7.878059 12.009255 10.3083688 7.9752100 9.4961373 8.8980194 8.4585477 9.8267638 4.4968650 7.6924153 11.3405325 5.0184027 -1.4571972 3.3500163 7.5194900 9.5999833 9.8418764 10.9285308 8.2396358 10.5292216 4.3500233 11.7747805 9.7762881 10.9092638 10.2234674 13.2975037 9.3174554 10.1702022 9.3075399 -1.4571972 8.8210134 4.7521224 10.8112103 4.6719500 10.0784297 10.5402007 6.9089906 13.4523271 10.9215051 11.1101492 13.1049704 9.5341902 9.0924530 0.8645725 TCGA-BH-A1FH 47 1 1123 NA breast stage iv t2 n1b m1 female 1998 NA NA infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-08 6.935946e-08 10.9463344 10.5177262 11.7879789 10.2470544 8.0617940 8.7577260 10.5633109 10.2844255 10.3810451 13.2648629 10.6631024 10.7979238 4.9667904 11.8456745 3.5939752 9.6134992 7.1127085 9.1673356 9.7639047 11.7754187 3.7348397 12.5691295 6.7222051 9.1776854 10.3382098 5.7597897 -1.6915226 8.6965948 9.0874761 4.9667904 8.1727635 8.1509277 0.8935175 4.9810032 10.2894312 10.8893071 9.8545072 10.6392143 10.1283575 11.8893072 10.7825368 9.9889370 15.0989642 8.7641205 10.2162194 11.4519607 11.4090756 6.4275190 5.1912191 9.9383895 12.6161341 -1.6915226 11.4430038 5.4785027 5.9667881 5.7348424 10.6206096 11.6917418 10.2389453 12.6637909 12.8194035 8.0634652 11.3293839 11.1446851 11.4873980 11.5250202 5.3746674 11.8203302 11.2242702 2.9524268 10.2740010 9.3652153 5.2642850 5.4785027 10.3440639 10.0167992 10.1688886 10.0016287 5.1665588 9.6242932 13.2570360 12.6432000 9.8940095 9.8674764 0.01656500 0.01656500 0.01656500 -0.06852900 -0.06852900 0.02918400 -0.02301800 0.02384700 0.02384700 0.88246000 0.00000000 0.00000000 0.00847430 -0.10605000 -0.06099900 -0.06099900 -0.06099900 0.01371800 0.02234700 -0.16052000 -0.09459200 0.23395000 -0.17740000 -0.16815000 1.28320000 -0.00526100 -0.00526100 -0.00526100 -0.03789100 0.01656500 0.01656500 -0.08983100 -0.06852900 0.02918400 0.02918400 -0.02301800 -0.07761100 0.02384700 0.02384700 0.02384700 0.02230400 0.01363200 -0.17525000 -0.04590600 -0.04590600 -0.04590600 -0.04590600 -0.10605000 -0.20747000 -0.16815000 -0.06099900 0.01712400 0.01712400 0.01371800 0.02234700 0.00052453 -0.16052000 -0.09459200 -0.18607000 0.00763920 -0.17740000 -0.16815000 0.02370600 -0.00526100 -0.00526100 0.49718000 0.01684500 -0.00041585 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 0.000 9.3733202 14.2330885 8.1927480 11.0544619 4.4583229 11.4399522 2.4785059 1.8935564 8.2304182 9.8559540 NA 9.6014915 3.7680043 9.4946918 9.5523465 2.3960499 10.9840936 11.1305507 10.0882969 8.4595939 9.0722546 8.1927480 11.0555116 3.4785059 9.5216817 10.2285581 7.2972620 NA 10.6575822 5.8084237 12.5247171 12.0630475 9.6971330 10.3509208 8.9470136 8.8419071 6.1094776 1.6304987 0.3085939 2.4785059 8.0262540 9.0020645 9.6169165 6.5082496 8.5545463 5.2154689 9.8926005 6.4934536 9.7546270 -0.1064048 12.2556665 3.7348397 5.8084237 9.5495835 5.4648120 6.4532361 9.4138312 8.3773559 8.3447513 -0.1064048 13.4374982 NA 10.6542599 -1.6915226 8.0767616 7.2393150 8.3880621 9.0775888 12.008738 5.050045 8.708389 11.845675 10.184327 10.054672 11.775419 12.589711 9.193511 11.334928 13.287109 10.713453 9.938389 8.010750 -1.691523 8.591666 11.158374 11.837032 6.893541 9.355701 8.723263 7.342001 10.378568 6.448130 8.311392 10.663102 6.070130 6.070130 6.141468 5.522702 12.990859 10.416775 8.219970 8.389395 11.968350 6.751521 11.116518 9.854507 10.159936 9.365892 11.378363 10.521074 10.584702 9.670521 2.009025 9.324529 7.865084 11.443004 9.497166 11.301916 10.620610 7.495929 13.834985 10.096480 10.577704 12.744378 10.528956 10.065968 4.784310 TCGA-BH-A1FJ 66 1 1927 NA breast stage iiia t3 n1b m0 female 1998 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 2 3 NA NA 1 1 1 4 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 10.9823104 9.9136118 12.0708367 9.6306168 8.8910020 9.1907176 10.6194070 10.1734477 9.0523385 13.8419065 10.1870100 11.2894226 0.9326659 12.5315064 3.9581931 7.9723589 5.2442439 8.2377410 11.1861662 13.5367793 2.4472353 14.4177309 6.0794976 9.7423096 10.9840594 8.8135516 2.3732306 6.6798896 9.7812792 0.4472089 7.4336405 8.5857573 NA 3.9832855 10.2952264 11.1184167 11.0858464 12.1477559 9.7088544 11.5716093 -1.8746134 11.4316479 14.5260308 9.0685488 9.6596042 11.5573212 11.9538346 4.3347542 7.0321923 8.1011495 11.0050761 0.4472089 11.5345597 3.7400101 3.6488681 4.7977290 10.4883410 12.1118545 10.3148172 12.6920690 13.2751676 8.0982811 11.2499074 11.0231790 12.2317007 11.2124327 4.9832809 12.8532750 12.6735814 -1.8746134 9.7709598 9.2468349 2.5860441 4.3732306 11.2597277 10.0449096 10.3377977 9.8984406 1.7102609 9.7723100 12.5757394 11.8179169 10.0842166 9.2127641 1.5768000 2.5645000 2.5956000 0.0072964 0.0240620 0.0384230 -0.0110720 0.0010451 -0.9494400 0.0086882 0.0086882 0.0086882 -0.0182380 -0.0020040 -0.0081339 -0.0081339 -0.0081339 0.0000000 0.0045156 -1.0071000 -0.0091926 -0.0355120 0.2077100 0.2077100 0.2077100 -0.1165100 -0.0926710 -0.0926710 -0.0423080 -0.0404080 0.0103600 -0.0505730 -0.0235510 -0.0696620 0.0384230 0.0192980 0.0192980 0.0010451 -0.9494400 0.0047935 0.0089667 -0.0100480 0.0086882 -0.0163550 -0.0163550 -0.0163550 -0.0163550 -0.0020040 -0.0020040 -0.0225940 -0.0081339 -0.0081339 -0.0081339 0.0000000 0.0045156 -0.0617150 -0.9386100 -0.0091926 -0.0355120 -0.0410870 -0.3560600 0.2077100 0.0152430 -0.1165100 -0.0926710 -0.0423080 0.0047935 -0.0735380 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 0.000 0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 0.000 0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.1111430 12.1450658 8.0780424 8.0589918 NA 10.3396206 NA NA 8.4210705 6.3541206 NA 7.1052695 6.8566210 10.3820998 9.5341618 5.4828547 5.0201199 10.1679867 11.5212371 9.8963781 10.0143072 8.1559688 10.4256539 1.5847220 10.1082950 9.5821691 2.5176284 NA 9.5484174 3.2545789 12.7629451 12.2764765 7.2622922 10.2272771 9.6552200 8.9526440 3.5847341 2.3732306 -0.2896509 2.0322067 8.5165451 8.7055598 11.3031880 1.8257449 8.9745893 7.0231467 10.3988056 6.3541206 10.0045017 NA 13.4685218 1.2952528 4.2750518 9.6069041 6.5714341 1.2952528 8.8976159 6.3920873 2.6488566 1.9326659 13.6809690 -1.8746134 10.5523523 -0.8746134 8.3672846 4.4472287 8.1724255 7.8222687 12.569359 6.358922 8.660577 12.531506 9.859088 11.739896 13.536779 11.417335 9.387983 10.996822 13.703409 8.897616 8.101149 10.038191 2.584722 7.344470 11.972555 10.787747 8.112565 9.336581 8.932656 10.240582 10.148127 4.740010 7.725214 10.187010 6.113986 -1.874613 9.539458 8.424257 12.125125 7.738170 7.241646 7.842978 13.805716 2.373231 10.688116 11.085846 10.381510 10.116823 11.305521 9.158036 10.792856 9.843406 1.825745 9.208182 2.648857 11.534560 6.500342 10.445007 10.488341 7.664460 13.180118 10.537607 10.643217 12.535355 10.580629 9.389744 1.125320 TCGA-BH-A1FL 69 1 1673 NA breast stage iib t2 n1b m0 female 1998 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 1 1 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 10.648168 10.083875 12.573590 9.269120 8.557475 9.578070 11.192384 9.276070 8.566779 8.708025 11.461112 10.589274 0.922959 13.110805 2.700528 8.552280 6.414777 8.506812 10.623115 13.521906 1.437494 14.400374 5.507887 9.817225 11.593200 5.615413 -1.884168 11.529725 9.271651 1.575022 8.016435 6.938935 NA 3.922921 10.221804 10.144165 10.013414 12.100610 10.529989 11.395324 2.870463 12.518181 13.719368 7.905851 10.095708 11.849960 11.163033 4.961058 5.081352 9.043346 10.687321 NA 10.793068 4.787991 4.843486 3.787997 10.230937 12.280868 11.202865 12.666135 13.086707 8.708959 11.027709 10.813344 11.430293 11.451796 5.575001 13.185102 12.822334 NA 10.187030 9.206342 4.807659 4.591302 11.352031 10.157912 10.382940 9.971604 1.816026 9.411337 14.324126 12.592884 10.726593 10.001264 0.47169000 1.33780000 1.35290000 -0.00954260 -0.00954260 -0.00373950 -0.00470790 -0.00055444 -0.00713140 0.00000000 0.00000000 0.00000000 0.00857400 0.00525300 0.00296570 0.00296570 0.00296570 -0.00407960 -0.00407960 -0.00138580 0.00666530 0.02810900 0.02777800 0.00366640 0.00027728 0.00610900 0.00610900 0.00610900 0.02272500 0.01279500 -0.76754000 0.00124810 -0.00954260 0.01419000 -0.00995650 -0.00470790 -0.00470790 -0.00055444 -0.00713140 -0.00713140 0.00527490 -0.00761010 0.00000000 0.01187300 0.01187300 0.01187300 0.00861350 0.00525300 0.01880300 0.00296570 0.00296570 0.01572700 0.01154000 -0.00407960 -0.00407960 -0.00407960 -0.00830050 0.00666530 0.02104300 -0.76807000 0.02777800 0.00366640 0.01502800 0.00610900 0.00610900 0.02272500 0.01335300 -0.77352000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5470657 12.1155681 8.1056723 9.8186065 3.9735470 11.4263229 3.0224566 NA 8.6576329 7.4884331 0.4375474 7.6892153 2.9735562 10.0107647 9.7549089 3.7879966 8.9936192 9.1337682 11.3773693 10.3723666 10.1033012 7.6430452 10.3241074 2.6391395 9.4374962 9.1106287 4.4906086 NA 10.2182001 3.5418369 12.6597478 11.8550324 7.5831738 10.1176800 7.2003768 9.1983824 5.4906086 1.1155660 0.1155660 1.1155660 9.3256306 8.8845796 9.6139187 5.1155702 8.7041143 4.9099843 10.8589299 6.6391294 9.6782876 NA 11.6072960 0.7005285 4.2240943 9.9721804 5.8516316 5.2240943 8.5512384 7.7394498 6.2030308 NA 13.6888011 0.1155660 9.8366674 NA 9.1407076 5.1155702 7.9293496 9.2063421 13.398782 5.046303 8.435240 13.110805 10.608678 11.080090 13.521906 12.816712 9.415200 10.888501 13.308362 11.901736 9.043346 9.736246 1.285521 7.550197 11.498057 11.4003922 9.1427831 8.5164474 9.9172764 9.0899827 11.0990392 6.3250212 7.9704367 11.4611120 4.2653169 -1.8841677 8.2227852 7.4864739 11.2335359 10.5721792 7.4554185 7.9688776 12.5593535 5.3443882 12.9864433 10.0134135 10.4055870 10.3626056 10.2079949 9.4301514 10.9199008 9.5116376 0.1155660 9.5559287 6.6154134 10.7930676 5.1816592 10.9721688 10.2309369 7.2345090 13.1853955 10.0459359 10.4927786 12.6546058 10.9870884 10.6830489 0.4375474 TCGA-BH-A1FM 44 1 1388 NA breast stage iiia t2 n2 m0 female 1998 NA NA infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.733986e-07 10.7021484 10.8494352 11.8331882 9.2181021 9.8824991 9.1933038 9.5953297 11.2759768 9.1753260 13.7754719 11.1814185 11.1300765 0.1208827 10.8380530 3.8213837 7.2875295 6.3814755 8.6882702 11.5298082 13.4203943 0.5359534 14.9148220 -0.4639471 9.1423905 11.0081684 8.1358980 -1.4639471 3.9622529 10.5905896 0.1208827 6.3688748 8.3385015 -0.4639471 3.3939653 10.1190681 12.0844460 8.2224858 10.7509114 10.1657973 12.7839128 -0.4639471 11.5354569 13.8394807 7.1183909 9.1001348 10.5824272 11.6901705 3.5359907 -1.4639471 9.8618529 11.1626069 0.8579014 11.8966952 4.6445081 6.4001707 3.9954212 12.1640890 12.2244542 9.6081178 11.9901560 13.2953534 8.0963183 11.3834342 10.7590820 11.8285945 10.4151856 4.3173475 12.6735368 9.0015518 -1.4639471 9.0848071 10.3704563 -0.4639471 5.2364237 10.8184945 11.2933753 9.8448931 11.3688753 2.3433510 7.6704119 12.7865058 10.8193631 10.1312427 9.2536617 -0.194110 0.381900 0.816130 0.261080 0.038385 0.220080 0.283550 -0.199610 -0.290340 1.069300 0.875500 0.597300 -0.181660 -0.667340 0.072000 0.072000 0.072000 -0.354630 0.205660 0.671250 2.397900 -0.122240 -0.656390 -0.470230 2.544200 -0.036402 -0.036402 0.223010 0.926040 -0.674980 -0.194110 -0.548130 -0.671780 0.220080 0.213630 -0.200980 -0.011731 -0.199610 -0.290340 -0.693490 0.043034 0.058100 0.071266 -0.715940 -1.292900 -0.671850 -0.166360 -0.667340 -0.165980 0.078601 0.072000 0.087553 0.087553 -0.354630 0.205660 0.482020 0.122130 -0.679290 -1.218200 0.000000 -1.292900 -0.470230 -0.448340 -0.668910 -0.036402 -0.659280 -0.107610 -0.660020 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.656 -0.656 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.359 -0.359 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 -0.410 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.656 -0.656 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.359 -0.359 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 -0.410 7.8511350 12.8042348 7.4186285 8.9389973 1.3433510 9.9093942 -1.4639471 NA 7.5500056 8.3736134 -1.4639471 9.3790348 -0.4639471 11.2209530 8.5980313 2.2364314 7.6857321 9.3124183 6.7599867 9.5980315 9.6184736 8.2224858 10.0046093 NA 6.1358980 8.2485121 NA NA 8.8374816 2.9282945 12.3503675 11.7077876 8.8579135 11.0056271 8.9768545 9.4726232 5.0437819 -0.4639471 NA 1.1209491 6.9110252 4.9110252 10.8314673 0.5359534 6.5422271 4.6234455 9.2570844 5.5246686 9.8511348 NA 11.0710176 2.2364314 4.3688731 10.6489363 5.0697065 1.3433510 8.1834438 8.2084104 4.4186285 -1.4639471 13.8466336 -0.4639471 10.0590571 NA 10.2866922 4.2364237 9.4345867 8.0693150 13.2250551 6.9995096 9.4376064 10.8380530 10.4455034 10.9716556 13.4203943 12.3442456 9.4024915 10.4930873 12.9349293 9.4421243 9.8618529 9.1552883 0.5359534 9.0972732 12.9834560 9.5345756 7.1941964 10.1167150 9.0506992 8.5939770 9.5114105 3.2364314 9.8483010 11.1814185 4.7454363 3.9954212 4.9283040 7.6565343 11.0447705 9.7617952 10.4593128 7.2013212 9.7642027 3.2364314 12.5759170 8.2224858 9.9104814 10.3308072 11.7767766 10.2991976 9.8663419 9.8351933 -0.4639471 7.9209632 3.0595456 11.8966952 9.2057561 9.8380530 12.1640890 6.9954167 13.4644574 10.5260893 11.8692804 11.8427590 8.8545281 9.2975365 -1.4639471 TCGA-BH-A1FN 34 1 2192 NA breast stage iia t2 n0 m0 female 1997 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.670339e-06 7.976338e-07 10.51574477 10.15570497 11.74578313 9.07865893 8.75575720 8.41092871 10.41863693 10.51670268 9.80677515 13.70848712 10.64051673 10.51813843 0.95969598 11.02715212 4.00411482 10.33421383 7.54468011 9.23234753 9.06169332 12.28502320 NA 13.65766266 8.44755771 9.18125663 11.23932834 3.66015281 -1.04037820 6.81769872 11.06038007 2.86661130 7.81769872 9.35739233 NA 3.20764301 10.04186678 10.85982982 9.68508392 11.43113892 11.15293505 10.91790788 1.95973307 11.15754873 14.56128543 7.80937328 10.57258627 10.68721277 11.65146125 4.86660636 4.68763743 10.26235669 9.79339847 -1.04037820 11.26149967 5.93699827 5.04718064 5.14954391 9.31836904 12.31864361 10.19213867 12.28319476 13.24872795 8.56519730 12.17631205 10.91210230 11.68038950 10.96218120 5.00411033 12.52553385 11.88712536 -0.04022984 10.37757029 9.13962681 2.96691030 4.89045642 11.06660777 11.17949127 10.19991277 9.71543988 2.12964571 5.93699827 13.21260487 10.92044375 10.40317930 9.32931514 0.3534900 1.3459000 2.3355000 0.1017600 0.6871300 0.0153080 -0.3671400 0.5886500 1.9261000 -0.7127400 0.1550200 1.5518000 -0.0364010 3.4309000 0.0077686 0.1288900 0.1288900 0.5608100 -0.7498600 1.0113000 -0.0225500 -0.7041500 0.1187300 0.1730000 0.1730000 -0.2178700 0.0752710 1.8887000 0.2978700 0.0884030 -0.4575800 -0.4003000 -0.7302900 0.1124200 -0.8089000 -0.0275350 -0.1483000 -0.7787800 0.7881300 0.8225500 1.1044000 -0.5505600 -0.7718900 0.4723800 0.3339700 -0.3391800 -0.6795800 1.5699000 -0.2673300 0.0077686 0.1288900 -0.3073300 -1.1999000 -0.2597000 -0.6553800 -0.6553800 -0.7462100 -0.0225500 0.1481600 -0.2003700 -0.2488500 0.1730000 0.0512450 -0.2178700 0.0752710 -0.6783900 -0.0931390 -0.1877300 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.195 -0.195 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 0.000 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.195 -0.195 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 0.000 7.45956359 13.07809108 5.18853544 9.44655276 2.28163891 10.55870071 NA 0.54468321 8.25663377 8.50081440 5.24511912 9.14195078 4.20764301 11.32740550 9.20764521 4.89045642 6.36910873 10.22416029 7.78308467 9.51334704 9.62606600 8.85756305 11.11009971 1.19849415 7.47541730 9.54561919 0.54468321 -1.04037820 9.87932593 1.95973307 13.03385920 12.46105735 7.50274987 10.98658692 10.96604380 9.73861620 5.71460546 1.54468321 -1.04037820 5.10946504 7.74762036 7.18853643 9.08513116 2.86661130 9.50593697 7.95407123 8.97094509 8.11706487 9.84998206 -1.04037820 11.75575732 4.57442853 4.16917140 9.57326772 5.93229508 1.95973307 9.60987203 6.46751263 3.35203813 0.54468321 12.52969198 -0.04022984 10.26634910 -0.04022984 8.03920256 4.98208547 8.27260086 8.74925133 10.449666 7.483280 8.181305 11.027152 10.791421 11.256060 12.285023 10.210608 9.557677 11.450318 13.263712 11.973564 10.262357 11.552408 2.129646 7.506612 11.095427 10.7007633 6.6179288 9.1195891 7.7245896 9.3029035 9.4101043 4.4191478 3.3520381 10.6405167 9.0577497 NA 7.5927127 8.8795940 11.5202894 9.7328570 8.0630056 8.3062312 11.1933374 3.9597145 12.6727852 9.6850839 9.9051616 9.9117308 12.4004572 9.4764028 10.0675887 9.4891483 9.9576028 8.5175643 3.7146082 11.2614997 8.0338590 10.4818088 9.3183690 8.3065197 13.0998285 10.5465576 10.3396376 13.2665627 10.9197197 9.1618416 0.5446832 TCGA-BH-A1FR 73 1 4398 NA breast stage iiib t4b n1a m0 female 1997 NA NA other specify 4 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 10.60230599 9.85881481 11.87544980 9.68355628 8.22433939 8.61136237 11.49262769 9.54201094 9.27423254 13.92559619 8.13421786 10.95087808 2.77667253 12.13719930 2.66975247 9.33672546 7.17876443 8.43691638 6.25471308 14.31568601 2.13924027 14.59804111 4.46116181 9.65561873 11.19331245 7.68011756 -0.03061924 8.70909140 11.65799823 1.55429414 7.24543481 6.47710577 1.96930708 4.55427572 9.81166112 10.53964089 10.41949107 10.74080026 10.34543619 11.31859201 1.96930708 11.78869158 14.37441901 8.35821074 11.16652748 11.52677450 11.13170214 4.01370343 -1.03061924 8.71918036 9.76128760 -0.03061924 11.12570992 3.49287865 6.42874205 3.49287865 10.83851905 11.86753428 10.14236327 10.89523604 12.67807140 7.73749479 10.50604372 10.81807067 10.96649031 10.83774752 4.58401843 11.73976821 10.85615050 -0.03061924 10.22787678 8.64526790 4.08159528 5.09859220 10.40028602 9.95586390 10.06338847 9.71498505 1.55429414 5.15913669 11.84410008 11.19782891 10.60366807 9.16406771 0.00027728 -0.00280030 -0.00754590 0.00013863 -0.00032891 -0.00116530 0.00000000 0.00124810 -0.00268480 -0.00142050 0.00555290 -0.00332430 0.00208050 0.00113070 -0.00083160 -0.00083160 -0.00083160 0.00013863 0.00013863 -0.00687510 -0.00128730 0.00138680 -0.00047252 -0.00047252 -0.00047252 -0.00235530 -0.00235530 -0.00235530 0.00513590 0.00027728 0.00027728 0.00444110 -0.00032891 -0.00055675 -0.00439970 0.00000000 0.00000000 -0.00871030 -0.00268480 -0.00268480 -0.00124730 -0.00124730 -0.00142050 0.00430210 0.00430210 0.00430210 0.00430210 0.00113070 -0.02849100 -0.00083160 -0.00083160 -0.00083160 -0.00083160 0.00013863 -0.00191960 -0.00191960 -0.00166290 -0.00128730 -0.00097017 0.00847300 0.00221930 -0.00047252 0.00138680 -0.00235530 -0.00235530 0.00138680 0.00346870 0.00374650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.71077785 11.17082215 6.73749479 9.15542493 4.25471497 10.97001505 2.77667253 -0.03061924 8.51427536 6.83349734 NA 6.44504465 -0.03061924 10.21842423 9.21605150 -0.03061924 7.52005760 9.65668656 12.02238817 9.83813334 9.88152652 7.93797755 11.42438110 4.58401843 10.07914140 10.26450570 5.27309063 NA 10.40654273 3.21723072 12.62819170 12.14314405 8.13421786 11.09181525 8.14173829 9.47710536 5.73749479 1.77665148 NA 6.44504465 8.75230905 9.60321425 9.76210111 3.61316622 9.81478512 7.22669829 10.74327419 5.93509431 9.62036244 NA 13.75925192 3.72420277 9.02323678 9.39767100 6.23243820 3.96930708 9.15913543 7.33999783 6.71077751 NA 13.41968438 2.42873200 11.05345479 NA 8.97071909 5.98053719 7.94659051 9.47214269 13.245726 5.273091 9.030007 12.137199 10.324513 10.434367 14.315686 13.251168 8.808515 10.605935 12.429255 10.576179 8.719180 7.546739 2.776673 7.766972 11.011654 11.07390958 8.58585977 8.86715640 9.21010219 8.58029852 10.44153961 7.28219421 10.50895428 8.13421786 7.03000715 -0.03061924 5.23609841 7.45939965 9.52773151 10.48155748 9.03802183 9.08695383 10.91804307 6.08825186 11.50282549 10.41949107 10.65581136 10.07783528 12.17647768 9.50458623 10.14173829 9.22197614 NA 9.38424974 6.43691638 11.12570992 4.96931169 12.01012619 10.83851905 7.05146020 14.04987853 10.69935634 10.41484303 12.96498963 9.89040793 9.57386395 2.13924027 TCGA-BH-A1FU 44 1 2192 NA breast stage ia t1c n0 m0 female 1997 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 6 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 11.0009662 10.2950664 12.1122628 10.0763990 8.0618583 8.8398557 10.3172735 10.4513896 11.3219183 13.7616236 9.9807024 10.9911769 3.4931734 16.8292382 3.4365883 9.8894469 4.8371258 8.9513415 7.9064740 11.9966915 1.6000794 10.6168950 6.9726410 8.6538189 11.0907944 5.8907628 NA 10.9779170 10.6542065 5.2021238 9.1135323 7.7870850 0.7927721 5.6630969 9.8032600 10.3182527 9.5198013 10.0885007 10.2074170 11.7951952 5.1502835 8.6814749 15.8186176 7.6721927 9.8439408 11.1866585 11.2084736 5.1146585 1.3776791 9.6646371 11.7863779 0.3777346 11.4994437 6.4931718 6.8316505 5.2684643 10.4239089 11.4957702 11.3805093 12.5665922 12.7863779 6.9116724 11.1661408 10.6746067 11.3907843 11.8041338 5.4509440 11.9882578 9.9570103 -1.2072279 10.5891771 10.1731929 3.1103298 5.2356735 11.3480399 9.9689049 9.9245888 10.3497168 4.4651582 10.4383903 13.7446084 12.2981713 10.4383903 10.0275493 0.12579000 0.12579000 0.12579000 -0.15848000 -0.12121000 0.10599000 -0.20921000 0.04939800 0.04939800 -0.32217000 -0.32217000 1.58180000 0.03397200 0.03397200 0.02735700 0.02735700 0.02735700 -0.13225000 -0.12135000 -0.17664000 0.10060000 0.07915900 -0.05307100 3.65690000 -0.03067700 -0.11535000 -0.11535000 -0.11535000 -0.00097017 0.12579000 0.12579000 -0.01904000 -0.12121000 -0.15208000 0.07187300 -0.14477000 -0.14477000 0.04939800 0.04939800 0.04939800 0.00000000 -0.03681000 -0.32217000 -0.23341000 -0.17172000 -0.17172000 -0.08479300 0.03397200 0.03397200 -0.06321900 0.02735700 0.02735700 0.02735700 -0.13225000 -0.12135000 -0.12135000 -0.15911000 0.10060000 0.07915900 0.03990200 -0.05307100 -0.31342000 -0.05838300 -0.11535000 -0.11535000 -0.00097017 0.22854000 0.12417000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.270 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.270 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 0.000 9.865534 14.308124 8.652267 9.823399 4.244271 11.359737 4.901258 7.011900 8.580634 9.137028 -1.207228 9.145515 8.221092 10.516819 8.918145 1.114634 9.843941 10.062443 9.647600 9.554283 8.885925 7.619280 11.748200 2.880196 8.901256 10.435235 5.150283 -1.207228 10.585929 2.699618 13.314516 12.629966 8.849369 9.789911 7.864194 8.765712 4.436588 2.600079 -1.207228 -1.207228 8.075820 9.519801 8.345401 5.362589 8.529861 7.653819 10.186659 7.580635 9.107881 -1.207228 11.243685 3.792730 4.837126 9.416421 5.597767 6.185050 9.899949 8.182901 7.924589 5.407441 13.479013 1.114634 10.593227 NA 9.946917 5.880196 8.154675 7.801161 12.160867 6.362587 8.849369 16.829238 10.022152 10.892408 11.996692 10.740369 9.357834 10.931004 13.162125 10.859830 9.664637 7.696614 1.114634 7.500091 12.764275 11.683376 6.392645 9.132582 8.896020 7.866873 10.580585 7.669249 7.962657 9.980702 6.922015 4.574089 7.557603 7.877354 14.254531 10.938027 8.575730 8.385189 10.863859 7.440191 10.517165 9.519801 10.302507 9.764275 11.445129 11.355213 10.710104 9.695861 3.493173 9.607971 8.364484 11.499444 8.394503 10.802560 10.423909 7.967657 14.396822 10.303002 10.430262 12.249343 10.738907 9.889447 2.493161 TCGA-BH-A201 64 0 NA 856 breast stage ia t1 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 6 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 6.935946e-08 10.5610034 10.5770318 11.6854471 10.0223252 8.0184890 9.2418566 9.9159012 10.5951756 10.5802163 13.5536584 11.1309423 10.9685486 0.8806463 12.6694981 3.4656088 10.6226725 6.7344725 8.8806439 8.6153534 12.3461252 -0.7043945 13.2405306 5.9751624 9.0354196 10.6341392 7.0064877 1.2956643 7.3989694 10.1098632 2.5436196 7.5124268 9.1325208 0.6175806 4.1285739 10.0848073 10.6598159 10.2326873 12.2824122 9.6581731 11.8809960 11.3804897 10.5352798 15.3393602 8.3541467 9.3482495 11.5340861 11.3676464 4.8655378 2.8806463 10.2668656 12.4548431 0.2957230 11.8054563 5.8425766 5.9821813 4.8955935 10.8246237 12.0157118 10.0852150 13.4934739 13.2455080 7.9627931 11.1407793 10.7813496 11.6997584 11.5328913 5.2264199 12.0989043 12.9963920 0.2957230 10.1984333 9.5822391 3.2784457 4.3831444 10.3768318 9.8084217 10.3973287 9.7865322 6.1721975 9.8328997 13.6671857 12.9591282 9.6847749 9.3644595 -0.00691950 0.43682000 0.43682000 0.01864100 0.46388000 0.00736090 0.00917050 -0.00124730 -0.47088000 2.47010000 2.29390000 0.04060900 0.00152550 0.00152550 0.01377200 2.95640000 3.65690000 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00744820 -0.01697900 -0.01697900 -0.01697900 -0.02342900 -0.02342900 -0.02342900 -0.01188700 -0.00691950 -0.00691950 0.03284500 0.01864100 0.00736090 0.00736090 0.00917050 0.00917050 -0.00124730 -0.47088000 -0.47088000 -0.00013862 -0.00013862 -0.52041000 -0.00664320 -0.00664320 -0.00664320 -0.00664320 0.00152550 0.00152550 0.01377200 -0.50764000 -0.51022000 -0.51022000 -0.01257600 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00581400 0.00592520 -0.45565000 -0.01697900 -0.12382000 -0.03484200 -0.02342900 -0.01188700 0.00305220 -0.00912860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 7.6986936 13.9437018 9.6669135 10.1687409 2.3924548 11.0837878 1.1030612 1.1030612 8.4643534 7.8636374 0.6175806 8.4998367 1.6176276 10.5697682 9.4191560 1.8806463 8.9232152 9.9218466 10.5042205 9.4737236 9.6840485 7.8113811 11.2464194 2.8806463 9.2264187 10.3407584 5.7551119 NA 10.5229964 3.9395369 12.3321984 12.2470571 7.9874249 10.0655191 9.1293621 9.3055100 6.0638653 0.8806463 NA 1.8806463 7.8521874 8.7240414 9.6992259 6.1158593 7.4275383 6.1474309 9.7719212 6.3346005 9.6349745 NA 10.6839677 4.7219468 4.7050711 9.8902112 6.1385339 3.4656088 9.1521068 8.0421956 5.2145445 1.7551012 13.6660963 -0.1193537 10.6449626 -0.7043945 7.3724968 4.8955935 8.3455299 8.2234592 14.7337064 6.0030400 8.9935176 12.6694981 10.4864720 10.8493106 12.3461252 11.7325230 12.0615123 10.9395375 13.5722056 11.0829718 10.2668656 8.4081208 -0.7043945 7.6062942 10.9614613 11.5735499 7.7135336 9.1973025 8.8759398 8.8241355 10.2906216 4.9103921 5.7551119 11.1309423 7.6685461 4.6532320 5.9961221 8.0072106 12.2256794 9.2227186 7.6728920 8.7145879 12.2066987 4.8192441 11.2540745 10.2326873 10.4048591 8.9636799 10.7476651 10.0790889 10.6201432 8.7612477 3.2956789 9.0984964 5.4146227 11.8054563 8.2729614 10.7048071 10.8246237 7.7571606 14.1081094 9.9909096 9.9891682 13.4656846 10.6925536 9.5880030 -0.7043945 TCGA-BH-A202 60 0 NA 795 breast stage ii t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 2 NA NA 2 2 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 10.6366946 10.2602141 11.5761159 9.6661718 9.2534481 8.5236576 9.0730814 10.0699341 10.3141163 12.1059763 10.1572115 10.4963047 3.7615938 15.5205709 3.9918891 8.5817742 5.2007084 8.6740238 7.9113422 12.7086137 NA 12.2273184 2.7050047 9.0036112 11.8391297 4.0153548 -0.3538373 10.0952665 10.1396397 2.0611541 8.1352968 8.1878598 NA 3.8685090 10.1598454 10.9644723 9.5565107 10.5007265 9.9426517 11.1899552 0.3830545 9.0498401 14.7085435 7.8021506 9.4004429 10.7895010 11.6747146 4.4705434 NA 9.2391975 14.1130440 -0.9387077 10.4540094 5.7193669 7.3694944 5.7890745 9.2348325 11.9350800 10.1545728 12.4049656 12.3681426 6.7300407 11.2045385 10.4625202 10.7535529 10.8068296 4.8940465 12.7928986 10.3214869 NA 10.0018360 10.6816042 2.6467157 5.5689502 8.2373285 9.9369047 10.1830125 11.4625682 6.3557757 8.8168774 12.8027276 12.0216098 10.2137570 8.4491726 -0.0227440 1.2277000 1.2277000 0.3093700 0.2826300 -0.0366740 0.2356600 -0.0395290 -0.0395290 -0.3970800 1.6389000 2.1053000 -0.3421700 -0.3421700 0.2530800 0.2530800 0.2530800 0.1545700 0.0000000 -0.3778600 -0.3738800 -0.0193140 -0.3602200 3.6569000 0.3015400 -0.0073339 -0.0183550 -0.0183550 0.2962800 -0.0227440 -0.0227440 -0.3627200 0.3093700 0.3739700 -0.0212350 0.2356600 0.2356600 -0.0395290 -0.0395290 -0.0395290 0.2687500 -0.0754780 1.8480000 0.2606600 0.2606600 0.2606600 0.2783700 -0.3435700 -0.3435700 0.2530800 0.2530800 0.2530800 0.2530800 -0.2667300 0.0000000 -0.3731300 -0.3778600 -0.3738800 -0.0193140 -0.3692900 -0.3602200 0.3015400 -0.0732100 -0.0073339 -0.0183550 0.2926200 0.3127400 0.2065600 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 0.100 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 0.100 8.3751720 12.3549143 6.1904391 8.8789383 2.9036361 10.0430792 2.3830822 NA 8.3626514 8.9322904 -1.9389842 7.8838853 3.0611541 10.6174218 8.7059130 2.3830822 6.4098831 10.5084969 9.7754009 9.7454656 10.2756900 7.2803235 10.7801162 1.7615831 10.1336229 9.1942976 1.7615831 NA 10.6293490 3.8160467 12.9317127 12.7359545 8.0484193 10.3226627 9.0723827 9.0298222 7.1000746 1.5205983 -1.9389842 6.8845222 8.4523990 9.7581228 10.1529212 3.1055440 8.2631321 6.0835240 9.8845225 7.5449714 9.3401855 -0.9387077 10.6740238 3.0611541 4.3830822 9.8027908 6.5355507 4.2509767 8.8979946 8.8334698 6.1748977 0.6461627 13.5928109 0.8685287 9.9062533 -1.9389842 8.9105603 4.0835197 8.5205869 7.6795406 8.9930524 7.1618172 8.8701196 15.5205709 9.6702786 11.8283052 12.7086137 12.1596809 9.5144259 11.0251351 13.0454847 11.6963066 9.2391975 9.4165064 -0.3538373 7.9918925 11.2958230 11.232332 5.726491 9.159187 8.313821 10.485322 10.348166 6.544971 3.705016 10.157212 8.670334 4.327939 7.866899 8.376429 11.829650 9.591074 8.354627 9.067481 12.830322 5.733579 11.281570 9.556511 9.693242 10.046286 11.046464 9.326770 10.943034 9.770670 5.190437 9.342958 5.026942 10.454009 7.341926 10.331232 9.234833 7.850689 13.754533 10.361794 10.865085 14.102772 10.071334 9.718920 1.761583 TCGA-BH-A203 78 1 1174 NA breast stage iib t2 n1b m0 female 1996 NA NA infiltrating ductal carcinoma 35 white not hispanic or latino NA NA 4 2 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 7.282743e-07 9.5773083 9.7566057 11.7573528 8.8203459 8.6061298 10.2715375 10.1087080 11.0472260 10.9845392 13.5950547 10.2428010 10.8226324 0.8418926 11.8447366 1.1049405 10.2130448 5.7488127 9.3345759 13.5898627 12.9045074 -1.4799550 12.7651004 1.6899253 9.1593343 13.0207731 8.8419216 3.2204383 11.6340611 11.1658770 0.1050075 8.2782167 9.7920400 -1.4799550 5.1199081 10.1105805 10.9028877 9.6041375 10.8556630 10.6170380 11.1570711 13.3170976 10.6232812 15.2232347 8.6871730 8.8203459 11.0324870 11.0654406 4.0745825 4.3013535 10.3564383 12.9899532 -0.4799550 11.3845665 5.2479123 7.0396297 4.7488101 10.8186288 12.1388378 10.0386466 12.1325164 12.9860699 7.4448062 11.1477553 10.2751690 11.1443320 11.1793204 4.9794263 13.8004743 10.1231561 -0.4799550 10.7756122 8.5242138 3.5204474 4.8237748 11.3961266 10.7048688 10.0469817 9.5657531 2.2204228 10.0093398 13.8158700 11.5907852 10.1529887 8.7548110 -0.314590 2.110700 0.672520 0.188890 1.507400 0.499600 0.643780 0.194820 2.534700 3.656900 -0.296500 0.705320 -0.041431 0.009207 -0.325070 0.444600 0.444600 0.277100 -0.022360 0.087245 -0.060345 -0.050776 -0.318090 -0.310260 0.226840 -0.304510 0.114920 0.114920 0.000000 -0.030950 -0.314590 0.154410 0.188890 -0.624550 -0.165740 -0.228960 0.015587 0.194820 -0.332460 -0.070402 -0.062629 -0.122780 -0.327390 -0.602060 -0.073329 -0.061689 0.192690 0.009207 -0.325070 -0.325070 0.444600 0.444600 0.444600 0.277100 -0.057924 -0.060748 0.087245 -0.066843 -0.216020 -0.307330 -0.318090 -0.310260 -0.607860 0.015587 0.114920 -0.116650 0.236430 0.483370 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.305 -0.305 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.305 -0.305 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.253 0.000 0.000 0.000 0.000 0.000 8.7110526 12.4035914 3.8053956 8.9187371 2.0794976 10.3756406 1.6899253 -1.4799550 8.3046283 7.7750222 1.1049405 8.9293845 2.9794218 11.2750897 8.5806893 2.9123050 8.5643877 12.7918212 10.1826619 11.3453498 8.1518979 8.1420453 10.9556637 2.3273425 6.6021421 10.1624964 2.2204228 NA 10.4403463 0.8418926 13.7557833 12.6344678 7.4298862 9.3544645 8.0917458 10.0855716 4.2479123 1.3273425 -0.4799550 0.1050075 8.2865222 8.7548110 10.5850730 4.6074546 9.6209908 6.9165985 10.0218306 5.9875983 9.9063949 NA 11.0040611 1.8419329 3.0435545 9.4602189 6.7725640 7.0707403 8.5478994 7.6389347 8.4727347 2.2204228 13.9213730 1.6899253 10.6457298 NA 9.8703801 4.1638529 8.9494001 9.0088378 12.773709 6.569842 9.892858 11.844737 10.121764 11.401681 12.904507 10.667834 9.582040 11.243441 14.059819 10.393438 10.356438 9.362344 -1.479955 8.294781 11.692577 11.3721328 9.2547032 8.5860828 8.7937889 8.6193411 10.9011795 6.3965106 8.4178390 10.2428010 6.1638489 1.5199947 5.0745825 7.9077956 11.2262736 11.1047211 8.5044118 8.6376367 8.8631793 7.5994785 12.5570393 9.6041375 10.2342389 10.1844407 10.8059736 9.1374610 10.5742586 9.4705493 0.8418926 10.2476162 7.8053956 11.3845665 6.8053956 11.1591080 10.8186288 6.9080107 14.0168472 10.5813646 11.3295606 12.2814408 11.2228155 10.0012884 1.9794401 TCGA-BH-A204 80 1 2534 NA breast stage iib t2 n1b m0 female 1996 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 5 1 NA NA 1 1 1 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 2.080784e-07 10.5678377 10.6272232 11.0514449 10.5251415 8.8257570 8.7988036 9.1690333 9.6051076 7.9873988 13.0902641 9.7128336 10.9227404 0.1825652 11.8218726 3.7675806 7.0652653 3.1826287 8.6412339 8.3744218 13.1147263 4.9267822 14.3274877 NA 9.6383604 11.5249193 5.8493788 1.0306186 9.5063526 9.6201663 2.3201380 7.9587261 6.6680496 NA 4.6288786 10.4458915 11.2606397 11.1554586 10.6006858 10.7368274 12.6965473 -2.1392358 11.4160023 13.6834393 9.6782295 9.4376510 12.6364074 12.1941291 3.4152854 5.1916100 9.7739576 10.7982519 -1.1392358 10.8259374 5.4229360 4.4754027 3.3201236 10.7895827 12.4501113 10.1570369 10.4587467 13.5084056 7.6272231 10.8809797 10.6506496 10.4783913 10.4822883 4.9899791 11.7265241 10.2945405 0.6680283 9.4219821 10.4241289 1.4480552 5.1735752 12.2298826 10.8369003 10.4966390 10.8804587 3.1086248 8.6494125 11.3836435 10.0716699 10.2008225 8.1379814 -0.00788630 0.02412700 0.02820000 0.00000000 -0.03857800 -0.04251700 -0.01106000 0.00471900 -0.04085300 3.65690000 2.89900000 1.53230000 0.01237600 0.03693900 0.01419000 0.01008100 0.01008100 0.00480250 0.00480250 0.05167200 -0.88820000 0.04287400 0.13495000 1.05150000 0.10731000 -0.43626000 -0.43626000 -0.43626000 0.10322000 -0.75986000 0.02258500 0.02186100 0.00000000 -0.04251700 -0.04251700 -0.03054700 -0.03054700 0.00471900 -0.04085300 -0.00069303 -0.00788630 0.81843000 -0.87408000 0.01391100 0.01391100 0.01391100 0.08681100 0.03693900 0.07237700 0.01419000 0.01008100 -0.84018000 -0.84018000 0.00480250 0.00480250 0.09202500 -0.03428000 -0.82448000 0.05380600 -0.81153000 0.13495000 0.13169000 -0.83833000 -0.42503000 -0.43626000 0.07802000 -0.07894300 -0.76510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 0.000 7.1758439 10.8214202 7.4900510 8.3655132 1.8606848 10.0704523 -2.1392358 NA 7.8996131 6.3724472 NA 7.3053158 -2.1392358 10.3763940 8.4964124 1.1826287 7.7570266 9.6611897 6.1038690 9.3323694 8.8654345 7.6696582 10.3080358 2.5045441 9.3349072 8.4864031 -0.1392358 0.8606848 9.7163414 4.9481569 11.7314442 11.1266023 8.1724425 11.6374357 6.7555125 9.0085351 7.3565497 2.9481523 -1.1392358 4.9587267 7.7279729 7.0846957 10.5133152 3.4456605 7.1502063 5.7061852 11.3520463 5.9899769 9.7776932 -2.1392358 7.5117455 2.8148990 3.2530060 10.3365517 4.3587830 NA 9.5018428 9.4512812 2.8606848 NA 13.4383591 2.1086248 9.6325963 NA 8.0256014 4.9587267 8.5348865 8.8761093 13.793679 5.146097 9.128651 11.821873 10.073583 10.953451 13.114726 13.375100 10.106247 11.225376 12.328809 10.977038 9.773958 8.002802 1.320138 7.807600 11.450228 10.7389368 7.6615943 9.0262293 9.8621025 10.6241141 10.4338514 4.7675859 9.8978979 9.7128336 6.5189065 -1.1392358 3.7433426 8.0197708 11.4103586 9.7717116 9.5697780 7.4790794 11.5428110 1.3201380 12.0056830 11.1554586 10.1080284 9.8156175 12.6435901 7.7402773 10.9207146 9.2769639 2.9050813 7.6677431 1.4456737 10.8259374 6.5852074 10.7028482 10.7895827 7.2594382 13.9384696 9.7302881 10.1871238 12.3695413 8.4955053 9.8243128 -0.1392358 TCGA-BH-A208 48 1 1759 NA breast stage iib t2 n1b m0 female 1995 NA NA infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 5 NA NA 2 6 4 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.387189e-06 3.467973e-07 10.5871154 10.0001081 11.1227455 9.2394150 8.1213351 8.6565314 9.1190757 10.3557722 10.9837469 12.7097741 10.1336995 10.4455192 6.1592154 12.1715330 2.1236000 10.3393668 5.8784777 8.6218420 8.9852983 10.5304338 -1.1982619 8.2425320 5.2610945 9.7810882 9.9778361 4.7323995 0.3865902 9.2216231 10.6596440 4.0495872 8.2131742 8.6025630 0.3865902 6.7616656 9.5607190 10.3724674 9.5780960 9.5029694 9.7434443 10.8794801 9.9212526 9.1100019 15.9467692 8.4973613 9.0111163 11.1780598 11.0859088 5.9715872 -1.1982619 9.8288780 12.6347508 -1.1982619 11.6292042 7.4705483 6.2195151 5.5960794 10.5850705 11.3903777 10.1145460 13.1620986 12.6736645 8.4934064 11.4328401 10.6224762 10.9930307 11.0376772 4.3252281 11.9189814 9.6510682 4.0870639 10.5739776 8.9803278 3.3896219 5.6843054 10.0713741 10.5669491 9.7860814 9.2824532 5.8016631 11.3480752 14.1395985 11.9846780 9.5739775 9.8990368 0.0065262 0.0065262 0.0065262 -0.2161400 0.7526100 0.5974600 0.2571500 0.7806100 0.2240700 0.5257300 0.0061090 0.0061090 -0.2356900 -0.2356900 0.1748300 0.6664100 0.6664100 -0.0697340 1.0996000 0.2659200 0.0207630 -0.2397300 -0.2341100 -0.2341100 -0.2341100 0.3460000 0.3460000 0.3460000 0.2390700 0.0168450 0.0065262 0.0000000 -0.2161400 0.4698100 -0.2764300 -0.2089600 -0.1964600 -0.2901100 0.2240700 0.2240700 -0.2382300 -0.0324500 -0.5087700 -0.1528500 -0.1528500 -0.1528500 -0.1528500 -0.2356900 -0.2356900 0.1748300 0.1748300 0.6664100 0.6664100 -0.0697340 -0.2377700 -0.2377700 0.2582700 0.0207630 -0.3233300 -0.2336100 -0.2341100 -0.2341100 0.2300900 -0.2670900 0.3460000 0.0130740 -0.0628980 -0.2615500 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 0.000 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 0.000 9.3639054 14.7413570 7.7264757 10.2174047 0.8195864 11.1082944 NA 5.1939806 7.9890152 9.8079890 NA 9.7913342 6.1415125 10.5797401 8.7832304 1.3866454 10.1258435 9.7558593 7.4705483 9.6881218 9.3568657 7.5632146 12.5095613 1.9715895 7.5764503 10.6804803 3.2610945 NA 10.7272175 1.6089984 13.6158449 13.0482552 9.9914875 10.4108417 8.5895654 9.8884627 3.5565520 1.8016553 NA NA 8.7703299 9.8858071 9.1020156 5.8350853 8.4533427 5.1767017 9.8302598 7.4562994 9.3193323 0.3865902 12.1322998 3.9715895 4.8891279 9.8217470 5.2848324 6.9665701 9.9958043 8.5346783 8.0590508 -1.1982619 13.6666713 2.6090221 10.5171961 -1.1982619 9.1668919 7.2975179 8.7264757 8.8677522 12.623684 6.340822 8.894420 12.171533 10.656921 10.319332 10.530434 10.783587 9.297518 10.642048 12.948073 9.385686 9.828878 8.261094 NA 7.416373 10.638108 11.407374 4.556552 8.964054 8.609018 6.659643 10.097145 6.301509 6.040068 10.133700 8.618646 5.609019 5.621841 6.043027 12.727866 10.834053 8.165798 8.678180 10.848446 6.755860 11.067498 9.578096 10.619046 9.822643 10.698374 9.989634 10.491661 9.562383 NA 9.912499 8.018409 11.629204 10.117379 10.679331 10.585071 6.714552 14.168700 10.375783 11.188603 12.636924 10.188064 9.590381 4.261094 TCGA-BH-A209 77 1 3959 NA breast stage i t1c n0 m0 female 1996 NA NA medullary carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 2 4 4 1 2 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.589149e-07 10.741505 9.249730 11.863967 9.224257 8.886358 10.416144 8.879122 10.135187 8.788368 8.283694 10.717617 10.897592 3.197598 10.926618 1.943846 9.821776 6.156293 9.112997 9.617356 12.627310 4.197598 13.495847 7.799910 9.302748 11.196873 4.174143 NA 12.796379 11.323055 2.943846 8.660201 6.706928 NA 6.443076 9.769414 10.259167 9.620614 10.319551 9.570956 10.890862 11.549750 10.558270 13.672745 7.858702 8.659145 11.315369 10.333185 4.024763 NA 9.293933 10.276827 -1.756818 10.863165 6.031307 8.400751 5.880029 9.864540 11.814327 10.898934 11.252882 13.412467 7.735257 10.841456 10.005370 11.621699 10.973874 4.150292 12.095933 10.657825 -1.756818 10.553732 10.373974 4.974314 6.690487 11.315536 10.231733 10.533999 10.966211 9.186651 6.644283 12.045314 11.664548 10.087717 8.748223 -0.0010658 0.5878100 0.3535400 0.0898960 0.1094000 -0.0996950 -0.0758370 1.4165000 0.0525690 1.2311000 0.1069100 2.2842000 0.1470100 -0.0662100 0.1340200 0.1340200 0.1340200 0.0581930 0.0581930 -0.3173500 -0.0879850 -0.0639300 -0.2690900 -0.2690900 0.1549100 0.8414600 0.2695500 -0.2644000 0.0000000 -0.1349300 -0.0010658 0.3392300 0.0926500 -0.2071800 -0.1077500 -0.3555200 -0.3555200 0.9868600 0.0525690 0.0338750 0.1367700 0.1155500 -0.5531300 0.8192900 -0.3051100 -0.3051100 -0.2523300 -0.0662100 -0.1028500 0.1340200 0.1340200 0.1340200 0.1378100 0.0581930 0.1525300 0.1525300 -0.3296800 -0.0879850 -0.0639300 -0.2849700 -0.2690900 -0.2690900 -0.3059300 -0.2598300 -0.2644000 0.1480600 -0.0177290 -0.5035600 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.114 0.155 -0.239 -0.239 -0.258 -0.258 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.321 0.321 0.000 0.000 -0.446 0.990 -0.305 -0.305 0.078 -0.103 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.114 0.155 -0.239 -0.239 -0.258 -0.258 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.321 0.321 0.000 0.000 -0.446 0.990 -0.305 -0.305 0.078 -0.103 10.3064616 12.1423829 5.1502956 8.1427606 6.0097995 8.3855108 5.7028348 -1.7568184 8.9662113 7.9593656 NA 8.1260467 4.7979935 11.5209817 9.9122886 4.9576500 9.7917439 9.1487908 7.8283663 9.3765459 8.7568945 7.3778300 10.5754402 3.6009595 10.2019564 9.5007915 2.2433949 NA 10.6738562 2.6357312 13.7853775 12.2356339 7.3388006 9.7845002 11.3636415 8.9730243 3.7669661 3.6357196 NA 7.4007505 9.2292457 9.0881095 10.1480382 3.9713228 5.9557940 6.2149466 10.4273491 4.2657744 9.8818396 NA 12.4014610 3.7669661 4.7825606 10.6873263 7.9186021 9.1044905 9.6474807 9.7635313 10.1454018 -0.1716934 14.2405831 2.5653291 10.3384710 NA 10.1611486 3.5288088 7.3255528 8.1562930 13.151280 7.063583 8.649609 10.926618 10.206860 11.205938 12.627310 10.992016 9.454075 10.793669 13.117761 12.200596 9.293933 8.182983 3.669673 8.210630 11.508872 10.2381107 6.6612565 9.0337523 9.5299615 9.1214545 9.4154435 8.6216984 6.9507623 10.7176166 4.9158268 1.2434254 5.0378215 8.3291285 9.7155868 11.4275041 8.8691126 10.0611867 10.1903099 10.0833948 10.8581963 9.6206143 10.5610989 10.4248666 11.0757004 8.9167128 10.4292083 9.1313858 -0.1716934 9.5537211 10.7803793 10.8631651 9.7566377 10.7445218 9.8645398 7.9593656 14.8659846 10.8168142 11.0278340 12.2582087 10.1939596 9.6940995 4.9438416 TCGA-BH-A28O 50 0 NA 324 breast stage iiic t3a n3 m0 female 2010 NA NA infiltrating lobular carcinoma 14 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 10.4352148 9.4455239 11.4207732 9.1342094 8.4845587 8.8536969 10.7109658 9.6815482 11.2763833 12.4926823 11.3926336 10.3665488 2.7267005 12.8938449 3.3641382 10.7647101 7.2778797 9.4485642 10.6107065 11.1438549 3.5109746 12.3808443 8.1770004 9.8564809 10.1902300 5.2847029 NA 11.3518056 7.8876977 3.0803507 9.1152013 7.9555244 3.2572219 5.0803421 9.9544552 9.6976103 9.5160581 11.0128783 9.8467995 11.2424054 7.2221167 9.3633301 15.3145222 8.3264861 10.0012779 11.0197940 10.9833075 6.3116684 0.5567972 8.7254528 12.9598592 0.8786861 11.0463777 6.2149913 6.5454649 4.5340616 9.8685289 11.9200941 10.3944086 12.7169672 12.7019167 8.0385799 10.7487651 10.9364974 10.9848790 11.4860390 4.8235660 11.2006368 11.8789904 1.3641241 10.4614152 8.7014389 5.5801455 5.8876983 10.7717068 9.9421038 10.6594125 9.0852348 5.2292072 9.6587563 13.1057229 13.7392913 9.9725224 10.2375796 0.03574900 0.03574900 0.12035000 -0.00152430 -0.00152430 0.00000000 -0.00152430 0.00027728 0.00027728 0.00083195 0.00083195 0.00083195 -0.00622860 0.00000000 0.00013863 0.00013863 0.00013863 -0.00290910 -0.00290910 0.00138680 -0.00166290 0.00097064 -0.00097017 -0.00097017 -0.00097017 0.00319100 0.00319100 0.00250950 0.00055459 0.03574900 0.03574900 0.00013863 -0.00152430 0.00000000 0.00000000 -0.00152430 -0.00152430 0.00027728 0.00027728 0.00027728 -0.00719580 -0.00733390 0.00083195 0.00110930 0.00110930 0.00110930 0.00110930 0.00000000 0.00000000 0.00013863 0.00013863 0.00013863 0.00013863 -0.00290910 -0.00290910 -0.00290910 0.00138680 -0.00166290 0.00097064 -0.13523000 -0.00097017 -0.00097017 0.01251600 0.00319100 0.00250950 0.00055459 -0.00373950 -0.00097017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.1613337 13.4337771 5.4875185 11.2765972 4.3904269 11.0220919 2.8787057 2.8787057 9.0566266 10.6168010 -0.4432028 8.7404159 5.7366888 9.2247790 10.0033470 3.6442485 9.8153466 9.6789615 11.5613522 10.0395886 9.7191468 7.7241987 11.7642526 2.1417271 9.6809019 10.7756465 6.3705619 -1.4433989 10.6309221 5.3896701 12.5726312 12.1134064 8.4500821 10.4576474 8.1696490 9.3584890 6.0243862 1.1417597 0.5567972 2.1417271 8.8966306 9.6449063 9.3944085 6.9187249 9.4733244 7.5225651 10.3495708 5.5109777 9.8294104 0.1416944 12.6042454 3.7267005 5.3249654 9.3469172 5.7659404 6.6653046 9.6633436 8.8787088 9.0416036 0.1416944 14.1652953 3.0803507 10.8162296 NA 7.7759493 7.4576476 7.2847010 8.6025404 12.3012455 4.3641382 8.5833040 12.8938449 10.5160581 10.0486337 11.1438549 11.8599905 9.0984482 10.5369202 13.4205797 12.7196439 8.7254528 8.1417429 0.5567972 8.0059293 10.4659237 11.579495 6.207832 8.641589 9.424831 7.107528 10.360242 7.576371 7.849102 11.392634 7.542623 5.991408 8.214992 6.434587 12.044872 10.388484 8.428686 9.352009 10.318332 6.528324 11.631668 9.516058 10.366549 9.806487 11.349571 10.741966 10.742275 8.422514 NA 9.861845 8.898855 11.046378 6.222117 11.749536 9.868529 6.771100 14.637119 9.920368 10.585032 12.671824 10.935888 10.114244 3.141743 TCGA-BH-A28Q 46 0 NA 196 breast stage iib t2 n1a m0 female 2010 NA NA infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 3 NA NA 1 4 2 3 5 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.080784e-07 10.90874259 10.33510436 12.07229549 10.30057278 8.42793170 9.60956125 10.55006510 9.28343034 9.84877487 8.22497504 11.75798113 10.48724837 5.15385397 13.28244366 4.42369245 9.86253539 7.65635550 8.34634042 11.33806222 13.18766859 2.96849631 13.75979427 6.72510991 9.47656072 11.06568264 6.68672882 NA 10.76522003 9.15065411 2.26222266 9.01430368 8.43951967 -1.98564471 4.26223018 10.22983675 10.75787599 10.70277267 11.41971116 10.11233589 12.02788814 4.16405413 11.17527814 14.86361111 8.43368475 10.03840106 11.97999787 11.83478191 4.26223018 4.38934654 9.54568521 11.43044152 NA 11.22330012 5.99729692 5.80871968 4.67251586 9.83008733 12.08299807 10.77044305 13.95321712 13.14036288 8.04220984 11.17779623 11.08999680 11.60594300 11.61653864 5.50615760 12.10912372 12.91002104 NA 10.14165337 9.40070528 3.33515450 5.29042809 11.11266489 10.00794979 10.42289891 9.92269634 0.01435529 9.09312173 13.50239494 12.80658569 10.29304360 9.64092545 0.85938000 1.10650000 1.23240000 0.00124810 0.00124810 0.02132300 0.07159500 -0.02370300 -0.57011000 0.07527100 0.07527100 0.07527100 -0.01560400 -0.01560400 -0.01367700 0.52293000 0.54083000 -0.03939400 -0.00705760 -0.49402000 -0.01064600 0.03622900 -0.05778900 -0.05778900 -0.05778900 -0.00664320 -0.00664320 -0.00664320 0.58775000 -0.05725600 -0.00484610 -0.05033700 0.00124810 0.02132300 0.02132300 0.07159500 0.06441700 -0.02370300 -0.57011000 0.00013863 0.07284500 0.05995800 0.07527100 -0.01064600 -0.01064600 -0.01064600 -0.05153700 -0.01560400 -0.01491600 -0.01367700 -0.64434000 -0.59409000 -0.63121000 -0.00705760 -0.00705760 -0.00705760 -0.49402000 -0.01064600 0.03622900 -0.71623000 -0.05778900 -0.05778900 0.00208050 -0.00664320 -0.00664320 0.59512000 -0.01491600 -0.07747800 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.51215576 12.77699723 9.31293921 9.82004761 4.26223018 10.96813641 2.10175091 -1.98564471 8.50415160 6.69378383 NA 8.13206371 1.82166940 10.08408912 9.43215623 0.59922256 9.19296863 10.20227433 11.12429763 10.35970905 9.89258850 8.19545588 10.27198620 4.12283007 9.78909082 9.94688756 7.03944331 -1.98564471 10.14680348 2.92118875 12.53473830 12.11906630 7.93316718 9.44423347 7.20906047 9.14423072 3.18423268 0.01435529 0.01435529 8.41731583 8.47065806 9.03597794 9.60208120 4.47373497 8.55821520 6.78248851 10.18954143 7.81034348 9.61235619 NA 9.61002748 2.18421681 5.35415239 10.01162087 7.03897275 3.50615760 8.70517480 7.55733580 5.33623339 -0.98564471 13.80276722 0.59922256 9.79196999 NA 8.87383842 5.01430173 7.88158265 8.89541775 13.360278 3.769190 9.644116 13.282444 9.758297 11.041000 13.187669 12.449518 10.017702 11.330698 13.930276 11.282700 9.545685 9.437420 1.599270 7.204128 11.859206 11.41531655 7.35415415 9.15577225 9.25211119 8.29159113 10.53263479 6.42369413 7.97285633 11.75798113 4.82165920 0.01435529 9.91366061 6.31241287 12.84511604 9.93837402 9.23518375 7.70430208 12.84184496 5.64365997 12.01636894 10.70277267 10.26608200 9.29739206 11.58889730 10.03389455 10.80485590 9.08106581 -1.98564471 8.74692070 5.37185504 11.22330012 7.38499091 10.69611313 9.83008733 7.73198014 14.20592208 9.87577837 9.62993340 13.27441472 10.77002589 9.77793105 2.01431958 TCGA-BH-A2L8 45 0 NA 612 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 4 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 9.606285e-06 3.81477e-06 9.6741193 9.4577363 11.5495678 8.3515572 8.6498288 9.5545691 10.0614780 9.7500519 10.2144500 11.6256141 11.2929112 10.3459977 8.7054700 12.4503529 2.7697717 9.8210426 7.5662284 8.1674929 8.6601065 12.8091140 6.4584722 12.3374179 4.0136856 9.9685974 10.3166565 7.6119469 1.9812682 11.6759738 10.3223300 0.1067503 8.7542555 6.8661303 NA 3.5218297 9.4569995 9.7245706 9.8014452 11.6034844 9.7104233 10.0850308 7.8233309 10.7098052 14.9475586 8.3162340 10.4533108 11.1845029 10.4610464 5.6511177 2.1067838 8.2867061 11.8625192 NA 10.2127055 6.7839294 7.2326406 5.9812659 10.2675089 11.9671081 11.1947018 12.3124885 12.6178908 8.2188020 10.8661305 10.2145895 10.6336223 10.6440154 4.1656869 11.3805926 11.4885202 -0.4781452 10.5122931 8.8727737 6.3928154 6.5330618 11.1103150 10.3459977 9.9919849 9.2420787 2.1067838 7.8095469 13.1049761 13.3656575 9.9930016 9.6613858 0.00527490 0.32012000 0.31771000 -0.00277070 -0.00277070 -0.00912860 0.31851000 -0.00429290 -0.00429290 -0.00484610 -0.00484610 -0.00484610 0.00249690 0.00249690 0.00027728 0.00027728 0.00027728 -0.00040652 -0.00040652 -0.00650500 0.00152550 0.00791750 0.01391100 0.01391100 0.01391100 0.02104300 0.02104300 0.02104300 0.01126100 0.00527490 0.00527490 -0.00083160 -0.00277070 -0.00912860 -0.00912860 0.31851000 0.31851000 -0.00429290 -0.00429290 -0.00429290 -0.00401620 -0.00498440 -0.00484610 0.00291330 0.00291330 0.00291330 0.00291330 0.00249690 0.00249690 0.00027728 0.00027728 0.00027728 0.00027728 -0.00040652 0.00000000 0.00000000 -0.00650500 0.00152550 0.00791750 -0.32228000 0.01391100 0.01391100 -0.00013862 0.02104300 0.02104300 0.01126100 0.00360760 0.02020300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1058575 13.3655103 7.5048277 9.7868634 3.8999973 10.3459977 5.0453949 -1.4783462 9.0296293 8.3356159 1.6917575 8.2095075 3.9141531 10.6277431 9.2283305 3.5662307 9.3307986 8.7190513 9.7880354 10.0590529 9.3538779 6.5386421 10.2347913 3.1068006 7.0296296 10.3622190 6.4347233 NA 10.6854842 3.5218297 13.3185839 12.2207562 7.8437628 9.9637413 9.4082932 9.6530484 2.3291810 3.0453905 0.1067503 12.9011452 9.3633989 10.0136877 9.4377138 5.6092970 8.5345289 6.0840770 10.3894994 4.5879230 9.3452019 -0.4781452 10.4158944 3.5218297 3.1068006 9.6784359 6.6099337 6.1656909 9.9354624 9.0335871 9.0648664 -0.4781452 14.2667209 0.8437427 10.2253055 NA 8.8793866 3.8072416 8.2446421 9.4760309 12.198570 5.566228 8.314625 12.450353 10.220973 10.693637 12.809114 11.352944 9.448679 10.173783 13.071318 11.171764 8.286706 8.799122 2.106784 7.001614 10.220105 11.1869483 6.6407756 8.6664800 9.0754639 8.4105777 9.9362291 8.6677666 7.2933236 11.2929112 7.5358547 0.5218548 5.2083339 7.1733164 10.9851035 10.6345998 8.8780224 9.2100849 9.8837783 7.6741195 10.8251929 9.8014452 10.6303590 10.0537033 11.2448554 9.4136182 10.4683753 8.4672783 NA 9.9288155 8.1030349 10.2127055 6.5932970 11.0028771 10.2675089 7.1442891 14.6208535 10.3527458 10.4562625 12.6457134 10.9985807 9.1755752 3.4287186 TCGA-BH-A42T 75 1 320 30 breast stage iia t2 n0 (i+) m0 female 2012 NA no infiltrating lobular carcinoma NA black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 9.00758797 8.97415098 10.74794421 7.67894444 8.62639387 8.84612470 8.91251215 9.35097387 10.77705850 10.93523210 12.72849669 9.87725775 -0.06476658 14.29456986 1.93523342 10.91965054 6.53514471 8.34886003 9.98553430 12.38179851 1.52019593 14.29278409 6.51517627 9.59455023 11.09468302 5.13163064 1.15762585 11.46058977 9.87039709 2.05071064 8.48212667 6.96129456 NA 2.25716152 8.56458852 10.01382763 8.98508055 9.49365274 9.08667153 9.53638380 3.20825192 10.02357861 14.21860988 5.94354865 9.72585207 10.13162935 10.19536753 5.28100826 5.59819844 8.56458852 9.61529858 NA 10.55880879 4.95018377 5.39466504 6.11845317 10.00176988 11.94260984 10.92059969 11.29058320 12.26624229 9.97460818 10.90940763 10.34400412 10.73208286 10.15923371 5.47955394 11.20416389 12.39338233 -1.64972908 10.40859957 9.36846979 4.02495790 5.62639533 10.74151317 9.81021349 10.48758101 9.13490449 0.67219902 7.84011763 13.07403717 11.80122305 9.71768430 9.01204762 -0.6809200 0.7100800 1.3609000 -0.7070800 0.6792300 -0.0165840 0.0965750 0.0254390 -0.0210690 0.7113900 0.7113900 0.0217920 0.0328930 0.0328930 -0.6864800 1.6438000 0.0677110 -0.0407050 0.0081047 -0.0108080 -0.7062700 0.0637020 -0.6736700 0.7697100 0.7697100 0.0637020 0.0637020 0.0637020 0.0723020 -0.6809200 -0.6809200 0.0744580 -0.7070800 0.0352900 -0.0333580 0.0000000 0.0000000 0.0254390 -0.7488700 -0.0137680 0.0127030 -0.7254100 0.6960300 -0.7073500 -0.7073500 -0.7073500 -0.6638900 0.0328930 0.0328930 -0.6864800 -0.6813700 -0.6918900 -0.6843000 0.0107510 0.0081047 0.0081047 -0.0108080 -0.7019300 0.0512940 -0.6709100 -0.6736700 0.7697100 0.0088008 0.0637020 0.0637020 0.0723020 0.0129820 -0.6508700 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 -0.164 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 -0.164 8.55972314 13.11265163 8.01560573 9.90101635 2.12214258 11.20162823 2.67219902 NA 8.72422222 8.29571338 0.35027092 7.96681861 6.64489023 10.78255051 9.99412584 3.39466504 6.75541105 8.77233437 8.32181313 10.54871462 9.73381189 6.39466333 10.66059835 3.90485978 6.37817519 9.67613709 2.43773377 NA 11.65076514 2.93523342 12.81634605 12.28045251 7.06451536 9.08751694 7.39739312 10.54963519 4.70782293 -0.06476658 0.35027092 2.74258835 10.28026759 9.89619933 9.37194366 5.18316094 9.45447512 9.08920628 10.12052056 5.42708652 9.58388929 -0.06476658 11.27915803 3.20825192 2.99412711 8.50774272 6.87727677 0.93523342 9.47955253 7.28396065 5.18316094 -0.06476658 14.16835241 1.35027092 10.35484122 NA 8.35026960 3.99412711 7.64028832 9.29936671 14.544846 7.515176 7.922022 14.294570 9.655761 11.541175 12.381799 10.135722 9.183974 10.381971 13.260303 12.479231 8.564589 10.235585 4.232914 8.267642 11.329337 10.8408698 6.1704479 8.2344400 8.9631380 9.8649836 9.4510435 7.8580643 5.4270865 12.7284967 8.8501156 0.6721990 7.3131660 7.3979390 9.8330776 8.9557490 6.7638975 9.4834117 10.0253445 4.9941271 11.1748286 8.9850806 10.0794654 9.9649795 11.5195683 10.2695054 9.8204201 6.8933015 -0.6497291 9.0086508 3.8097025 10.5588088 4.3726387 10.6307504 10.0017699 7.6654191 13.5558720 9.8918502 9.6851015 12.7218421 12.0428851 9.1487415 1.3502709 TCGA-BH-A42U 80 0 NA 3324 breast stage ia t1a n0 mx female 2004 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 3.467973e-08 9.1982282 8.5623710 10.6946765 6.0353666 8.9166656 8.6043875 9.8083427 9.4471802 12.3136374 12.2989583 11.2219299 10.2048512 1.5275708 12.9848888 2.6150396 11.6188421 8.2520859 9.0123949 10.4067723 11.6298758 NA 12.7351965 8.4071551 10.1574249 10.5331966 3.4344681 NA 12.6013479 8.7431049 0.8495189 8.7382433 6.7707458 -1.4723291 4.3604626 9.0393246 9.1946835 9.1999974 9.7345863 8.7849600 10.1541937 8.1274847 9.5609950 14.9894671 6.0897375 9.9112655 10.0144070 9.8612864 6.1274847 5.4464349 7.5609954 12.1369816 0.8495189 10.6100538 5.8036972 5.8494989 3.6150396 9.2949288 11.7790544 10.5909671 12.0062153 11.9497682 8.9166656 10.4144117 10.4817684 10.1641966 10.3240172 4.8129756 10.8296397 10.9297847 -0.4723291 10.6735041 8.6030510 3.1125333 4.3349258 11.1434315 9.2520859 10.1298069 8.2791161 5.4344614 9.5623710 13.8297111 13.4030334 9.5485520 9.9844398 -0.00193990 -0.00193990 -0.00193990 0.00638710 0.00047492 -0.06316600 0.00291330 0.00013863 0.00013863 0.00115300 0.00115300 0.00287220 0.00298230 0.00298230 -0.00168930 0.00361620 0.00361620 -0.00041585 -0.00041585 0.00152550 -0.00069303 0.00610900 -0.00723870 -0.00723870 -0.00723870 0.08569300 0.08569300 0.08854800 -0.00249380 -0.00193990 -0.00193990 0.00249690 0.00638710 -0.06316600 -0.06254900 0.00291330 0.00291330 0.00013863 0.00013863 0.00013863 -0.00484610 0.00000000 0.00115300 -0.03721800 -0.03721800 -0.03721800 -0.03721800 0.00298230 -0.00127090 0.00208050 0.00361620 0.00361620 0.00057995 -0.00041585 0.00346870 0.00346870 0.00152550 -0.00069303 -0.03142700 -0.08505900 -0.00124730 -0.00723870 -0.09102300 0.08569300 0.08569300 -0.00249380 -0.00097017 -0.09340300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.4715519 13.0905299 4.9870025 10.9910964 5.2690406 10.9353709 6.2280125 2.5275708 9.4494130 9.7926010 0.1125000 8.5582393 6.1200284 9.5527116 9.8279246 3.2824546 8.8347728 9.1228295 10.2778603 11.3169019 9.3554229 6.5882679 12.2099083 2.3349401 9.6849190 10.9554086 6.3979364 NA 10.8787873 4.2554932 13.4045206 12.0187988 8.7309201 9.7173966 8.5609950 10.0565144 4.1714310 1.1125667 0.1125000 5.9538379 9.7358063 10.7503669 9.1560176 5.9951770 9.2545650 9.0735019 10.3329129 5.1714270 9.7861381 0.8495189 12.0874271 2.5275708 3.8129705 9.3268537 7.0663433 7.0274184 10.3252335 8.3525308 9.1228295 1.3349115 14.2376520 -1.4723291 11.1937960 NA 7.8807186 6.6722301 7.8629621 9.5098526 12.607549 5.097430 8.105001 12.984889 10.325639 10.316698 11.629876 10.848936 8.992118 10.067700 13.603845 12.970062 7.560995 8.390209 1.527571 8.082161 9.647810 10.991096 4.812976 8.948585 9.240958 6.682391 9.423125 8.074466 8.576059 11.221930 7.070604 2.697507 6.844984 6.363875 10.955932 10.282459 8.098794 10.302771 5.334926 7.299061 11.829497 9.199997 10.793480 10.132588 10.544728 10.412887 10.090768 6.308932 NA 9.629948 8.545772 10.610054 5.707481 11.542116 9.294929 6.789667 14.638687 10.014407 10.460525 12.373160 11.064062 9.000263 2.334940 TCGA-BH-A42V 41 0 NA 635 breast stage ib t1c n1mi m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.040392e-07 9.9495254 9.0507871 11.4714061 8.4154671 8.5637759 8.5868946 10.8725489 9.4530996 11.1937153 12.9593660 11.1616279 10.3145472 2.2194938 13.3481590 3.0268355 10.3912822 6.7272752 8.8091311 10.3723984 11.7798127 2.2194938 13.1712655 6.0586845 10.1763497 10.6814709 6.9059802 NA 9.1278726 8.3095923 0.8044666 9.2929522 7.0203800 1.5414157 4.7740701 9.7902843 9.5492762 9.5186880 11.7450007 10.0755163 10.9210030 10.0883025 11.5139571 14.9874574 7.5163044 10.6415447 10.9952959 10.4617609 5.6203606 5.7586390 8.4956044 11.6454825 -1.7804133 10.5907120 6.1910237 6.1502164 4.1021206 9.7346869 11.9126401 10.5498366 12.0804699 12.7327757 8.0444389 10.5742803 10.6943899 10.9577833 10.9835222 4.9473997 11.4639924 12.2178940 NA 10.4727365 9.3253884 4.6305686 5.1021248 10.6901388 10.0859861 10.3135576 9.3513368 4.1263700 7.6267479 13.6398349 12.8964287 9.9072930 9.7692646 2.9784e-03 1.2481e-03 3.3299e-03 4.7744e-05 2.2193e-03 -8.9824e-03 2.0903e-02 1.7996e-01 1.2093e-01 3.9055e-01 3.9055e-01 4.1078e-01 4.1593e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -2.2168e-03 -1.2989e-02 -1.2989e-02 -1.2989e-02 -2.7707e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 2.9784e-03 2.9784e-03 -4.1585e-04 2.2193e-03 5.6919e-03 -4.2652e-04 2.0903e-02 2.0903e-02 1.7996e-01 -3.6340e-01 -3.6306e-01 -7.8863e-03 -1.4916e-02 -3.7065e-01 -2.5072e-02 -2.2881e-02 -2.2881e-02 -2.2881e-02 9.7064e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -1.2473e-03 -3.5407e-01 -1.2989e-02 -1.2989e-02 2.2193e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 -3.4359e-02 4.1317e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.000 0.000 -0.352 0.391 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.000 0.000 -0.352 0.391 0.000 0.000 0.000 0.000 9.4495003 13.1934911 6.5232608 10.2939559 4.8341904 10.5912566 4.4289329 0.2194628 9.1671168 8.9651543 -0.7804133 8.0786264 5.3280035 9.7386246 9.7464681 2.8633438 9.7459791 9.3201423 9.7238024 11.5893498 9.3680391 7.1881467 11.5633596 2.7430410 9.9264075 10.5057488 7.6992601 NA 10.9248963 6.7391163 13.6512387 12.1707646 8.3831297 9.8124040 7.8378657 9.6613866 3.9474043 2.3894016 -0.1956160 0.5414157 9.8166013 10.1663862 9.9722787 6.5548697 8.9224577 7.7683021 10.5278190 5.5770330 9.5543118 -0.7804133 11.0177492 3.3487565 4.6624220 9.9021849 6.7451176 6.0332622 9.5487156 8.4386484 9.5781311 -1.7804133 14.1794592 1.6789283 10.5278190 1.0268001 8.4289334 6.1852640 7.4932759 8.1780329 12.223330 4.743041 8.784582 13.348159 10.412389 9.887035 11.779813 11.786366 9.330955 10.204610 13.060061 11.929318 8.495604 8.111263 1.026800 7.850657 10.327024 11.240980 5.695214 8.584709 9.092924 7.440004 10.316333 7.404356 8.293622 11.161628 7.317512 5.933726 7.795019 6.555496 10.777901 10.050787 8.083666 9.358392 10.529809 7.036464 12.060634 9.518688 10.850430 10.295962 10.816369 10.605612 10.357752 8.364138 -0.195616 9.690469 7.721317 10.590712 5.727275 11.285233 9.734687 6.919990 14.599247 10.158324 10.642070 12.333303 11.150217 9.778379 2.389402 TCGA-BH-A5IZ 51 0 NA 567 breast stage iib t2 n1a cm0 (i+) female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.803346e-06 5.201959e-07 8.0778417 8.4448505 11.8464133 8.3356798 8.8981582 7.8416757 10.6826731 10.5832157 12.7818677 12.9710332 11.3827755 10.0326830 -1.2643045 12.4206250 2.4362152 12.5683602 7.3056222 8.0933188 9.2145365 9.1869779 NA 9.3805245 7.4738591 9.6236500 10.2903557 4.7801631 -1.2643045 9.8285240 11.3910740 2.4362152 8.8880516 7.7329462 NA 3.3207302 9.3477137 10.2937091 9.0822805 8.9919756 10.1594081 10.5863444 NA 9.6207006 14.8267269 7.9552256 10.0042737 10.1792285 9.6184099 3.4362018 2.8232398 9.2236069 8.8931137 NA 11.1698738 4.0211688 4.2903580 8.5527505 7.9181614 12.0198680 9.7329463 11.6303952 11.9377376 8.8637613 11.4877293 11.2285239 10.3742028 10.8585949 3.6426554 11.3034853 6.4222666 2.0576929 10.3467916 9.2425704 4.6785170 4.2276179 11.0226133 10.5635065 11.2727425 8.8508104 -0.2643045 5.3056240 12.8415117 12.0722734 9.4457122 10.7991620 0.2400000 1.0268000 0.8532400 -0.6111400 0.1967300 -0.6315000 2.3005000 -0.5719000 0.9845200 0.0654930 0.0654930 0.1219600 -0.1021100 -0.0926590 0.0000000 -0.5414900 0.2433900 0.9865900 -0.6266500 1.0793000 -0.6119100 0.2122300 -0.6229300 -0.6229300 1.0176000 0.1715500 -0.2185500 -0.3622700 0.1013400 0.2035000 -0.6233100 -0.5998300 -0.6111400 -0.6315000 -0.6315000 -0.6222900 -0.6222900 -0.5719000 0.9845200 0.1823800 1.0464000 0.1571100 0.0607940 1.7386000 0.1360800 0.1360800 -0.6225500 -0.0069195 -0.0069195 -0.0666540 -0.5414900 -0.6020600 -0.6020600 0.9865900 -0.6266500 -0.6266500 -0.6325400 -0.5776300 -0.6706700 -0.6417300 -0.6229300 -0.6229300 0.0841720 -0.6033200 -0.3622700 0.1566600 0.1108100 -0.5974000 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.047 0.151 0.151 0.101 0.101 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 -0.267 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.047 0.151 0.151 0.101 0.101 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 -0.267 6.9056915 13.7947310 2.1951901 9.0072300 1.0576929 11.9481112 1.3207157 6.9305233 9.1377130 8.6855937 3.5937482 7.9525130 2.9056975 10.3904029 9.4696296 3.4906600 4.3207302 12.3375376 11.5047782 10.3305580 9.8462763 6.0756161 12.1255326 1.3207157 8.1578315 10.4283824 3.7801631 -1.2643045 11.0332564 2.9056975 12.0463796 13.6552354 6.1536189 10.2578579 7.6546303 10.0666838 3.2593328 3.0576929 -0.2643045 4.9056927 8.4396705 9.0833881 7.8547082 1.5430999 9.2865039 7.4670862 9.9831011 4.4906536 10.6241296 -1.2643045 12.0882242 1.3207157 0.3207735 10.4998174 7.8202300 4.3796210 9.0497835 7.5654898 6.5431216 4.7357659 12.9815424 -1.2643045 10.9122517 NA 8.1683086 2.6426554 8.1869779 7.0072303 12.128932 8.831164 8.048650 12.420625 10.675346 11.529980 9.186978 11.435556 9.023802 10.912252 13.110535 12.064161 9.223607 7.954936 -1.264305 8.381425 10.262266 11.1137907 9.0856010 9.0257857 8.8018561 9.1630798 9.2179294 5.7691899 5.8125829 11.3827755 11.7815265 1.9056975 8.2135252 8.6771812 11.9687873 10.0599474 7.7413915 10.4495829 7.9717809 4.6184090 8.8714248 9.0822805 10.0423982 10.1291573 11.8848788 11.9952159 9.8981582 8.3467916 NA 10.1760547 5.1451598 11.1698738 6.2514673 10.6854695 7.9181614 7.4568661 13.0371916 10.9044389 10.0101450 11.8303394 11.8727580 8.3393931 -0.2643045 TCGA-BH-A5J0 63 0 NA 715 breast stage ia t1c n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 3 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 3.121176e-07 8.4487259 8.7216122 10.7357952 6.5768063 8.6300858 8.7436146 10.1287098 9.6139660 10.8184533 12.9595871 11.1794595 10.1739723 NA 12.1830581 1.2122580 10.8232580 5.0801289 7.7420541 10.3202349 12.4085895 NA 13.3671779 6.7790482 10.3664286 10.1646833 6.7911720 NA 13.4387658 11.1194243 -0.1096701 8.9883373 6.6584900 NA 4.5050144 9.0526966 9.6410122 8.8357488 10.2555340 9.1986442 9.7529426 7.5768055 10.0652309 14.6996713 6.5116246 10.7892844 9.6782077 9.1606006 4.2826251 5.3332484 7.7451735 10.2451054 -1.1096701 10.6079816 8.3741209 6.0092464 5.7482868 8.9537003 11.7815192 10.8426824 11.5128146 11.9069393 8.7866375 10.1382326 9.3670512 10.0664783 10.0627326 2.4752665 11.9069393 10.9098959 2.0602204 10.5807397 8.2826224 1.4752925 5.3660389 10.3786474 8.6267071 9.3640110 8.5732995 3.2122269 8.8225198 12.9371733 11.7106836 9.0602301 9.9968680 -0.110770 0.476670 0.664010 1.742500 0.428220 0.221490 0.055943 -0.522460 0.331410 3.656900 -0.144380 0.251190 0.070530 0.070530 -0.061152 -0.061152 -0.061152 0.109640 0.109640 -0.096044 0.281840 0.304090 -0.479700 -0.479700 -0.479700 -0.115040 -0.115040 -0.174740 0.304250 -0.110770 -0.110770 -0.094196 -0.528490 1.385300 -0.231530 0.055943 0.055943 -0.529400 -0.145150 0.331410 0.203200 -0.111820 -0.897480 0.035242 0.035242 0.035242 -0.104470 0.070530 0.369860 -0.376280 -0.061152 -0.418570 -0.498670 0.109640 0.109640 -0.106690 -0.518870 0.127400 0.234950 -0.520330 -0.479700 -0.479700 -0.529530 -0.072942 -0.115040 0.304250 -0.768000 -0.498920 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.127 0.304 0.480 0.000 -0.480 -0.480 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.127 0.304 0.480 0.000 -0.480 -0.480 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 0.000 9.5916115 14.0394965 4.4138648 10.3123699 3.0602377 11.1082628 2.5907457 -1.1096701 8.6028321 8.3861600 -1.1096701 7.1476934 3.4752665 10.3841606 9.5040946 2.8903105 8.0702143 8.3761345 8.5959374 11.9411741 10.9252141 6.2031874 11.2492310 2.0602204 5.4294653 10.1316925 6.1570922 NA 10.7389281 4.2478592 12.6482160 12.5213685 8.0451235 9.4780826 10.1064446 10.0819813 2.9777745 2.8903105 -0.1096701 5.2122347 9.3197119 11.2462068 10.3492244 4.8903056 8.7903566 8.2189802 9.9590834 4.0195863 9.3831597 NA 9.5377635 2.2122269 4.0195863 9.3830495 6.7347909 3.6976626 10.1877946 8.6267071 7.9804178 -0.1096701 13.6991185 0.8903299 11.1328838 NA 6.7544907 4.0602290 7.6847213 9.4799562 12.801868 5.901533 8.351785 12.183058 10.189513 11.005674 12.408589 11.774285 8.992976 9.827679 12.547512 9.723986 7.745173 9.440090 5.175708 6.576806 9.918211 10.641012 5.333248 8.888895 8.347686 7.019589 9.779155 8.343576 9.234601 11.179459 8.606267 2.349733 5.265343 7.023498 9.278322 10.107051 7.417782 9.683909 5.576806 5.671664 11.695743 8.835749 10.704888 10.176285 10.622048 9.586403 10.012486 6.382159 NA 9.677816 5.194087 10.607982 6.562731 10.789662 8.953700 7.203188 13.688828 10.987020 10.417782 11.712478 10.894877 8.668382 1.890291 TCGA-BH-A6R8 46 0 NA 293 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 1 NA NA 1 1 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6181212 9.1770961 11.1323459 7.3131923 9.6605565 9.4567994 9.9763217 9.4729976 9.6419887 14.4869586 10.5178162 10.3982597 NA 12.9670280 1.6345003 8.3908650 7.3982597 7.3502656 7.3533127 12.1194288 1.4645637 13.4960980 2.1650115 10.4582257 10.5123747 8.5171371 1.6345003 11.9079012 9.3593868 NA 9.0746711 6.6041203 NA 2.7864918 9.9807615 9.2319260 7.8066437 11.1706333 9.1941898 10.3544533 0.7865127 11.5517004 13.5740733 7.9219088 10.8955442 10.7331111 9.7266640 3.8568861 6.3953062 7.8568867 11.3563528 -1.5353317 10.2410021 5.2847473 5.7499713 4.8739608 9.2102435 11.4140311 10.6450999 10.1111278 11.9495178 10.1160693 10.8330756 10.1697695 10.3919767 10.0201168 4.7864970 10.3357043 10.6906802 NA 11.4523660 8.7254886 2.9691965 5.0191592 10.3322340 8.4173103 10.7825469 9.4317953 0.7865127 9.2807527 12.6906049 10.1676074 10.5228991 9.5021159 -0.0037395 1.1564000 1.7547000 -0.0151910 -0.0127130 0.0000000 0.6099100 1.1502000 -0.0052610 0.6010800 0.6010800 0.6085900 -0.0257560 -0.0257560 -0.0238400 -0.0238400 -0.0238400 0.6965200 0.1370200 -0.7055000 -0.0210980 -0.0353120 -0.0402090 -0.0402090 1.1266000 0.0274970 0.0274970 0.0274970 1.6869000 -0.0510660 -0.0037395 -0.0011087 -0.0151910 0.0000000 0.0000000 0.6155600 0.6357300 1.1502000 -0.0052610 -0.0052610 0.7629300 0.7591000 0.6010800 0.0758470 0.0758470 0.0758470 0.0758470 -0.0257560 -0.0257560 -0.0238400 -0.0238400 -0.0238400 -0.0238400 0.1370200 0.1109600 0.1109600 -0.6608700 -0.0210980 -0.0353120 -0.0547400 -0.0648810 -0.0323140 0.5836300 0.0274970 0.0274970 0.6236900 -0.0286280 -0.5183500 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 0.186 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 0.186 7.8525863 12.1002872 4.1650115 10.0095335 2.1914047 10.7542998 1.0495611 NA 9.2068786 8.4418490 NA 5.0495306 5.2589862 10.5844828 9.1307932 1.4645637 5.6642410 8.9342110 6.5678572 13.1941367 10.0765298 7.0229903 9.3616583 -0.3980183 9.1378782 9.3248801 6.8308916 2.8568861 10.6605564 3.6740199 12.1507413 11.9737255 7.1263472 9.8341664 12.1282384 9.7751819 2.3714473 -0.5353317 -1.5353317 2.1650115 10.0732859 10.6335545 9.2823522 1.0495611 7.1916051 7.9342110 10.3395504 5.6244402 10.3725864 NA 9.2903230 2.3714473 2.0495262 9.9726015 6.9396944 3.1650115 10.3310753 8.2009712 9.3555934 0.4645637 12.8881446 -1.5353317 11.2397678 NA 7.5835101 3.7499740 8.3609015 8.7089328 12.4913856 4.5089610 8.8308913 12.9670280 8.9372599 11.4839861 12.1194288 11.1093267 8.7706309 10.1663087 12.6831323 8.0588939 7.8568867 10.4993681 -0.5353317 7.4216710 10.8973720 10.8913580 7.3037725 8.2622306 8.8675811 7.6543933 9.6807087 6.8132976 9.1147233 10.5178162 7.6319875 0.4645637 3.6344887 8.7810203 7.9920461 9.9629197 10.2063984 9.7231351 10.5413846 5.7406928 11.1933229 7.8066437 11.1790293 10.0889076 10.3627926 9.2557320 10.4461364 7.9054382 -1.5353317 9.8888772 5.0191592 10.2410021 5.4645703 10.5905314 9.2102435 6.4191731 12.2235210 10.5450536 9.9969249 12.1112403 10.3291422 9.0095336 -0.5353317 TCGA-BH-A6R9 61 0 NA 160 breast stage iia t2 n0 m0 female 2012 NA no metaplastic carcinoma NA white not hispanic or latino NA NA 2 4 NA NA 2 5 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9228579 9.7412364 11.1481867 8.7697787 8.1854890 8.8521662 6.8069775 10.7288290 11.0074702 9.2886520 10.0689182 10.4132040 0.7037209 10.9757359 1.8736164 10.8291029 6.1549011 8.7603271 8.9180087 6.4451572 1.2886539 8.2447862 2.6105820 9.9325081 5.3761132 2.6105820 NA 12.7453717 9.8135200 5.0960088 8.4468410 10.8854629 -1.2961905 5.4585756 9.7149167 9.8767419 9.5254635 9.2331199 9.1875052 10.6210615 3.1631284 4.9131431 15.8444194 8.8610618 10.0188390 10.7277902 10.8477103 4.1955445 -0.2963677 8.8984463 11.6381175 -1.2961905 11.5324210 6.0165721 7.0346064 6.7751520 10.7491078 11.5120504 10.4396684 12.6058761 12.5303372 9.0852324 10.8965987 10.9380968 10.8303939 10.8361892 4.6105820 11.3193191 10.5836555 0.2886539 11.0882034 8.9468633 3.2928554 5.8736139 10.9355107 10.1487043 10.3211569 9.3063883 1.2886539 5.9798127 13.7824657 11.9905359 9.3565345 10.2365323 -0.0796090 0.1538200 0.1538200 0.0064546 0.1563600 -0.0164290 0.1562100 -0.0440090 -0.0440090 0.0000000 0.0000000 0.0000000 -0.0491540 -0.0491540 -0.0013858 -0.0013858 -0.0013858 -0.0206870 -0.0206870 0.1456300 0.1523300 -0.0633010 -0.0087146 -0.0087146 -0.0087146 0.1331700 0.1331700 0.1331700 0.1433500 -0.0796090 -0.0796090 -0.1161300 0.0064546 -0.0164290 -0.0164290 0.1562100 0.1562100 -0.0440090 -0.0440090 -0.0440090 0.1553200 0.1553200 0.0000000 0.1377600 -0.4402700 0.1518800 0.1518800 -0.0491540 -0.0491540 -0.0055375 -0.0013858 -0.0013858 -0.0013858 -0.0206870 -0.0206870 -0.0206870 0.1456300 0.1523300 -0.0633010 -0.0062395 -0.0087146 -0.0087146 0.1432500 0.1331700 0.1331700 0.1405500 -0.0922130 0.0590800 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 0.000 9.2085085 16.5966294 7.3183991 11.9397036 2.8919246 9.3672476 0.7037209 4.8329710 8.8910415 11.9514686 -0.2963677 9.4101855 4.0612405 10.2252899 9.4660716 4.2272482 8.8082882 9.4924078 7.6636912 8.7246694 9.1694292 7.1045684 12.1903988 3.7036877 5.7149159 10.9426912 3.0960088 NA 11.6107679 1.5110632 12.7078221 12.4042375 9.6687522 9.9161858 10.2394508 9.5373702 6.0165721 3.5616683 1.0255958 -0.2963677 8.2811182 9.8928963 6.6403274 5.5365783 8.4527206 6.4652399 9.9174012 7.3036027 9.8817318 NA 10.9204353 6.0787294 5.0960088 9.3241841 5.8253277 7.1215418 10.5262603 10.0418687 8.5094334 7.7426086 13.3413332 NA 10.8223062 NA 8.0634388 5.3619017 8.2055264 8.7764919 12.1631403 6.7093141 8.0278701 10.9757359 10.1098945 10.0023249 6.4451572 11.2311664 8.7589720 10.5928131 13.4553904 10.7967768 8.8984463 8.7684321 0.2886539 7.2811186 10.4430482 12.0215260 2.0256313 8.6090764 8.6270169 7.3036027 9.9511779 8.8291030 6.6636919 10.0689182 6.2961472 -0.2963677 7.7260574 7.1815290 13.7432940 10.1310023 8.1362314 9.7232802 9.7487665 7.0256180 10.9061255 9.5254635 10.9736927 9.6636913 9.6417987 12.1041687 10.2645000 8.6299853 NA 10.3428041 8.1067016 11.5324210 9.2389647 10.6644155 10.7491078 6.6923742 13.9814127 9.9331092 10.2881823 12.5855681 11.3291700 9.4718737 1.0255958 TCGA-BH-A8FY 87 1 295 NA breast stage ia t1c n0 (i+) m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 1 1 3 3 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4762302 9.1342191 10.9323894 6.8571599 9.0370214 8.8222260 10.3893991 8.9747593 9.1969247 9.8836634 8.8275202 9.9188120 1.7347421 12.5914481 3.1497959 8.7736822 6.8363016 8.1582295 8.6255342 13.0254540 3.9046864 13.5528127 7.2425577 11.0571721 10.6933158 7.4535818 NA 9.0491575 12.8751669 0.7347421 6.6966950 6.0923153 NA 2.9571531 8.5844289 9.7663495 10.0023301 11.6176609 9.4558623 10.4299914 4.8777197 11.8413261 13.9812564 8.0181295 9.7129969 10.3822216 10.1996492 5.0324447 1.1497796 7.5718656 11.1032696 -0.8502204 11.0585686 2.1498121 4.5760625 3.9046864 9.6184248 12.3136076 11.2399131 12.1306543 12.7938823 8.5399695 10.4095439 10.2465158 10.5739669 10.5948155 3.8502394 11.5581304 10.6664856 NA 10.0967070 8.2451976 4.1985570 4.6092349 10.1526157 8.9409637 10.0278515 8.9130129 1.7347421 9.7562059 12.2456921 11.2027083 9.9952907 10.1039969 -0.00263220 0.91561000 0.87308000 -0.01697900 -0.01697900 -0.01202400 1.69380000 -0.01285100 -0.01285100 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.01307400 -0.00013862 0.88866000 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00805670 0.00903120 0.00903120 0.00903120 0.01267600 0.01642500 0.01642500 0.02216400 -0.00263220 -0.00263220 -0.00995650 -0.01697900 -0.01202400 -0.01202400 1.62150000 1.62150000 -0.01285100 -0.01285100 -0.02037800 -0.00901440 -0.00691950 0.00000000 0.00541390 0.00541390 0.00541390 0.00541390 0.00513590 0.00513590 0.01307400 -0.91725000 -0.92354000 -0.92354000 -0.00013862 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00805670 -0.95145000 0.00903120 0.00903120 0.01712400 0.01267600 0.01642500 0.02216400 0.01488800 0.02244400 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 1.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 1.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3644113 10.8984128 4.6733642 9.0491575 2.4717337 11.3408599 0.1497796 NA 8.7900458 7.0077819 NA 5.5532376 1.1497796 9.8588844 9.7024697 4.5421156 5.5760656 9.0760967 12.5242968 11.1890624 9.5569622 7.1213439 10.8411080 3.8502394 9.5989493 9.6615533 3.2372578 -0.8502204 10.4979755 4.5073507 12.7947835 12.8353160 7.1039969 9.8777211 7.6214761 10.1547233 NA 2.3197335 1.1497796 5.9442166 9.3519244 11.2935027 10.4615490 2.9571531 8.5920601 7.7234480 9.9999875 5.4717272 9.4512968 NA 12.4346248 NA 5.7043906 9.6499254 6.5969664 0.1497796 10.1170269 7.9046882 5.7791573 NA 14.5870651 0.1497796 10.0529294 -0.8502204 6.2583248 5.4165864 8.1155847 8.6908972 13.896474 5.194193 8.738515 12.591448 9.359254 10.973566 13.025454 12.524704 9.642065 9.439819 12.422868 7.853704 7.571866 9.766350 1.957172 7.887893 10.497422 10.6046140 5.5927441 8.6376208 8.5802533 8.4142434 9.4739813 7.2842272 5.7791573 8.8275202 7.9245875 NA 8.9030175 7.3785714 8.8979936 8.7589793 6.6416544 9.3774166 10.5128403 1.1497796 12.9416320 10.0023301 10.7663495 9.5431912 10.7612866 9.2739219 10.4558624 6.6655008 NA 8.7679659 1.7347421 11.0585686 0.1497796 11.4421223 9.6184248 7.2842272 14.9791518 10.5660704 9.8606072 11.7406216 10.3402427 10.2057609 0.1497796 TCGA-BH-A8FZ 58 0 NA 574 breast stage ia t1b n0 m0 female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.712925 9.076137 11.068256 9.061467 8.108334 9.600333 10.400084 9.730864 11.508056 11.407019 11.142511 10.002431 1.748590 14.014638 4.106139 10.437708 6.918509 8.712925 9.492577 11.366969 4.392441 11.203654 7.782007 9.362355 10.005972 5.191527 -1.251539 12.609984 10.900552 4.174846 9.050080 7.828069 1.748590 5.462828 9.939643 9.921011 8.895789 10.526661 9.517595 11.461326 11.243689 9.401429 14.979974 7.632052 11.231888 11.269203 10.703144 5.503473 2.748590 8.705686 11.909873 NA 10.661847 5.908455 7.913491 5.363294 9.625101 11.795196 10.351283 12.371093 13.127421 7.056923 10.109979 10.050074 11.103935 11.046360 5.070514 11.056354 11.971681 -0.251367 10.370636 9.671168 4.248110 6.406795 9.519248 10.095098 11.675806 9.600333 4.748585 8.981005 13.797837 13.895192 9.680799 9.033986 -0.00429290 -0.00429290 -0.00083160 0.00148700 0.00430210 0.00124810 -0.00373950 -0.23496000 -0.23496000 -0.33964000 -0.33964000 0.33286000 0.00013863 0.00013863 0.00055459 0.00055459 0.00055459 0.10818000 0.10818000 0.01293400 -0.00152430 -0.00762190 -0.02192100 -0.02219500 -0.02219500 3.60610000 -0.03463100 -0.03463100 0.00537570 -0.02651400 -0.00429290 0.22746000 0.00360760 0.00124810 0.00124810 -0.00373950 0.25652000 -0.24764000 -0.23496000 -0.23496000 0.04925600 0.04925600 -0.33964000 -0.32843000 -0.00013862 -0.00013862 -0.02627100 0.00013863 0.00013863 -0.33445000 0.00055459 -0.33757000 0.00499690 0.10818000 0.32173000 -0.25914000 -0.33237000 -0.00152430 0.00000000 -0.34446000 -0.36136000 -0.02219500 -0.33306000 -0.38325000 -0.03463100 0.00055459 -0.00013862 -0.02288100 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 0.000 9.5551334 12.5504943 5.6793225 10.3838486 5.3779393 10.7650440 6.2484305 1.0705267 8.5639673 9.1159987 1.0705267 8.2161895 3.0705095 9.7612085 11.9224171 4.2080178 10.1225366 8.9761998 10.7020528 10.5175952 9.5552866 7.8957885 11.1935987 4.0705095 9.7005970 10.1547889 7.9433406 NA 10.8538376 3.9185103 13.3985136 12.4992908 7.8855750 9.8187049 11.0503659 9.6227968 9.4832934 2.7485900 0.3335382 4.6065666 10.3160647 9.5917198 9.4959377 4.9580353 10.0761702 7.9334593 9.6896315 7.3669691 9.3824872 -1.2515388 11.1507966 4.7027794 4.7027794 9.2289500 6.6532492 6.8038663 10.6392282 8.7916113 12.9246791 0.7485471 13.7872886 1.3335382 10.3955925 NA 7.2993308 5.6674465 7.6096708 9.1873758 12.385974 5.782007 8.786131 14.014638 10.172225 10.257864 11.366969 11.253155 8.980465 10.715810 13.720083 13.046790 8.705686 7.228364 1.918501 7.854493 9.659976 11.440981 6.631227 8.667447 8.449024 7.989375 9.762458 8.445551 7.539747 11.142511 7.070512 2.996515 6.820046 6.973791 11.614124 10.718690 7.822725 8.724432 11.317015 8.185295 11.685590 8.895789 10.627401 9.822056 10.935008 10.459390 10.559959 8.528303 -0.251367 9.348701 7.836047 10.661847 6.216189 11.638848 9.625101 7.381688 14.209584 10.262311 10.218226 13.205259 10.435960 9.238432 1.555914 TCGA-BH-A8G0 54 0 NA 662 breast stage iib t2 n1a m0 female 2012 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4454011 9.5042352 11.5593888 8.9485144 8.4889078 9.3871691 10.8439677 9.6594747 10.6628934 10.9499145 11.3350843 10.2749177 3.1100124 13.1287519 1.9400916 11.0122184 6.7214451 8.5418567 8.9666093 12.2272210 4.8227301 12.9907848 7.0275489 9.8323858 10.1562253 5.7082700 -1.0597957 11.2223055 8.7490502 0.5250666 8.6832371 7.6439896 NA 4.5250478 9.8544709 9.8469764 9.8522267 11.4053971 9.7863598 10.5278633 6.3830286 11.4828759 15.0726458 8.4074467 9.9101916 11.0904678 10.6857602 5.5982967 2.1099957 8.6107421 11.6775444 NA 10.2620139 6.4399323 7.1446572 5.9513127 9.8250195 11.6722533 10.5179866 12.2911631 12.8466007 8.6577622 10.7721847 10.6869192 11.1040499 11.0716213 4.8469746 11.3237901 10.8443441 0.5250666 10.3700156 8.7634531 5.0087558 6.3237898 10.5441757 9.8019482 10.3866522 9.3248695 4.5839402 9.6300838 12.9229012 13.2315443 9.8833332 10.1018475 0.02946600 0.02946600 0.26232000 0.00055459 0.00055459 -0.00027724 -0.00097017 -0.00268990 -0.00268990 0.00097064 0.00097064 -0.00083160 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00020717 -0.00020717 -0.00609040 0.00083195 0.00263570 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00791750 0.02946600 0.02946600 -0.00027724 0.00055459 0.00733550 -0.00027724 -0.00097017 -0.00097017 -0.00268990 -0.00268990 0.00013863 0.00471900 -0.00609040 0.00097064 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.32426000 0.00652620 0.00000000 0.00000000 0.00000000 0.00000000 -0.00020717 -0.00020717 0.00221930 -0.00609040 0.00083195 0.00263570 -0.17677000 0.00027728 0.00027728 0.00166420 0.00027728 0.00027728 0.00791750 0.00416320 -0.00270480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1495392 13.8066886 7.2529691 10.4233978 6.2209490 10.5212864 7.6405255 1.5250666 8.6949735 8.5231687 0.5250666 8.1384080 3.9400822 9.6874397 9.8257821 3.1100124 9.8611829 9.0182366 11.1954095 10.2450075 9.7403630 7.5325429 11.1775946 4.0693671 9.9301897 10.4597221 5.6680056 NA 11.0248942 4.7214438 13.2786133 11.9421976 8.1856386 10.5911375 8.2976376 9.1409844 3.9400822 3.7474411 0.5250666 2.6405284 8.8767238 10.0420615 9.5584714 6.3995181 8.4468496 7.2392940 10.4787598 6.0169019 9.6474449 NA 11.8563385 4.7980661 5.2254870 9.1189748 5.2108019 8.0007820 9.6474449 9.0974328 8.0354826 3.4636486 13.7223674 1.9400916 10.4254120 NA 8.6611849 6.7918349 7.7279885 9.4339413 12.427839 4.188013 8.530673 13.128752 10.412269 10.236429 12.227221 12.475726 9.239786 10.455786 13.112591 11.486980 8.610742 8.585744 -1.059796 7.471467 10.612069 11.270443 6.463647 8.689955 8.827306 7.362151 10.172003 8.711575 8.475361 11.335084 8.321629 3.027543 7.668006 5.678314 11.657762 10.989934 8.102477 8.855965 12.058054 7.654331 11.703226 9.852227 10.325409 9.718163 11.264829 10.480698 10.388718 8.772976 -1.059796 9.928273 9.118751 10.262014 7.923080 10.903148 9.825020 6.962454 14.268914 10.020237 10.365826 12.545334 10.972132 10.134843 1.747430 TCGA-BH-AB28 53 0 NA 287 breast stage iiia t3 n1a m0 female 2013 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 2 NA NA 3 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.0298896 9.2236342 11.0611740 9.4713594 8.6615722 9.3497262 9.8920561 8.8365371 10.5627717 12.5864315 11.2774408 10.1637383 1.9948331 14.1169642 3.6728892 9.6480190 4.9208173 8.2912729 10.8651804 12.7030374 3.4277805 13.6870388 7.4737877 10.1188593 10.4982439 2.7603487 NA 9.2245958 10.3802466 1.4802651 8.7995921 7.2616023 0.2578555 3.5308698 10.0413940 10.1546870 10.1173848 10.9956607 10.3759260 11.2892066 11.4005953 11.2873674 14.5682735 7.9386434 10.1752221 11.4458206 11.1979189 4.6270815 2.2578555 7.8944746 10.7676250 -1.3269864 10.6997567 5.5432515 6.4673039 4.1964497 10.3377792 11.7651492 10.8108393 13.1188723 12.9421603 8.9385025 10.8586921 10.7966339 11.0525367 10.6558811 5.0991521 11.7145467 11.4842622 -0.3271674 10.3431012 9.1199708 4.0723974 6.0038046 11.3029271 10.4810473 10.5665683 9.4185619 2.3733141 9.7924772 13.2507884 12.3999571 9.8340194 9.8565230 0.00527490 1.05780000 1.05780000 -0.00041585 -0.00470790 -0.00290910 0.03270400 0.00833510 -0.01222000 0.00055459 0.00055459 0.00055459 0.01572700 0.01572700 0.01810300 0.60413000 0.01474900 -0.00650500 -0.00650500 0.00000000 0.01251600 0.02862200 0.02272500 0.02272500 0.02272500 0.01782400 0.01782400 0.01782400 0.04386500 -0.54310000 0.00527490 -0.00124730 -0.00470790 -0.00290910 -0.01574100 -0.00545980 -0.00545980 0.00833510 -0.01222000 -0.01222000 0.00221930 0.00221930 -0.56684000 -0.55747000 -0.55747000 -0.55747000 -0.55747000 0.01572700 0.01572700 0.01810300 0.00360760 -0.56286000 -0.56286000 -0.00650500 0.01474900 0.01474900 0.00000000 0.01251600 0.02651400 -0.54784000 0.02272500 0.02272500 0.01737400 0.01782400 0.01782400 0.04386500 0.01167900 0.04287400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 0.000 9.2265167 12.7912609 5.2727996 9.8251723 4.4336405 10.5101212 5.8226358 0.6729231 8.8835588 7.8823410 -1.3269864 8.2139839 5.4802425 10.0764322 9.6938674 4.6501671 9.3750603 9.1394738 9.1022944 10.4942629 9.6412592 7.5677052 10.5331986 4.2578479 10.5041948 10.0452085 5.2727996 -1.3269864 10.9252573 2.1323136 12.4551691 11.6274474 7.1727335 10.3741940 8.5417100 9.4084435 3.3167395 2.7603487 -0.3271674 2.9208078 9.4219188 9.8403057 9.7576959 4.8428129 10.1636833 7.8527966 10.4745958 7.0127374 9.5593463 -0.3271674 11.4697383 3.9582859 4.0991521 9.3450830 6.2925204 5.8226358 9.2765139 8.1261583 6.9903003 -1.3269864 14.0299927 0.6729231 10.0716312 0.2578555 8.3004212 4.9766661 7.4834595 9.5105156 13.351149 6.352368 8.625629 14.116964 10.662991 11.239655 12.703037 12.096135 9.380186 10.758692 13.251555 12.059019 7.894475 10.229394 2.672878 7.034831 11.700794 10.784023 7.686908 8.919628 8.710435 8.870104 9.454887 8.122036 6.555531 11.277441 6.661573 2.760349 9.006043 7.497942 11.621437 9.828971 8.125396 8.647302 12.547965 6.242743 11.538671 10.117385 10.164741 10.326180 11.373544 10.038116 10.226997 7.994816 NA 9.563266 7.223634 10.699757 6.331100 10.451507 10.337779 7.457522 14.239061 9.350607 9.668655 12.992419 11.700102 9.642993 2.760349 TCGA-C8-A12K 80 0 NA 0 breast stage iib t2 n1 m0 female 2010 NA NA infiltrating ductal carcinoma 1 asian not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.53162e-06 9.01673e-07 9.9201242 8.8422746 11.2768133 8.3932283 8.9817160 9.1168970 7.5101304 10.8524193 12.1273786 13.4155554 9.8629710 10.6789699 -1.6966576 10.8185694 1.7625614 10.6792413 8.4917048 7.8748683 10.4702204 6.8148683 NA 9.8069417 7.7522642 9.3184472 10.3254837 7.4011483 2.7625402 14.2924394 10.4879912 -1.6966576 8.6227880 7.4037781 NA 5.3799328 9.4181596 9.9233358 8.7314762 9.7465775 8.6759810 10.5957251 -0.1118510 7.5954373 14.3548559 6.8690941 9.1048244 11.0748117 9.8691700 3.3475098 NA 9.0225049 10.0538229 -1.6966576 11.0586294 6.1423195 7.9896165 6.8843171 10.0995611 12.2889578 9.7002557 10.2547649 12.7536828 5.9755408 11.5990283 11.1929792 11.4457017 11.3291206 4.6429672 12.2898468 8.0877508 -0.6968914 10.5569634 9.4298203 2.0090963 6.4168583 11.2683591 10.3644871 10.7162149 10.0022546 1.6250366 5.5415210 12.4944065 11.6351524 9.4655072 9.1383768 0.0814660 0.0690950 0.0468420 -0.4472800 0.2642000 0.6106300 -0.4745900 0.7358700 -0.4405900 -0.0873700 -0.0873700 0.7326500 0.6623500 -0.0644340 0.0668020 0.0334080 0.0334080 0.5620500 0.0829090 0.1067200 -0.4178400 0.4873300 0.0549450 -0.4776500 0.0030522 -0.0319050 -0.0417020 -0.0417020 -0.0280810 0.0227250 0.0781590 -0.4612500 -0.4472800 -0.0011087 -0.4546900 -0.4745900 -0.4540400 -0.4872200 -0.4405900 0.0995790 0.1180000 0.0556580 -0.0873700 0.2471600 0.2642000 0.2642000 -0.4760700 0.0520260 -0.4841800 0.0081638 0.0334080 -0.4326800 -0.4326800 -0.4345300 -0.4574700 0.0126550 0.1521800 -0.4347400 -0.4767000 -0.0019659 -0.5066000 -0.4776500 -0.0131220 -0.4671700 -0.0417020 0.0445740 -0.4383200 0.5471800 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 0.000 9.3213162 12.7481308 0.6250834 8.2775306 1.6394174 10.8679799 2.4730336 -0.6968914 8.8276577 8.8509744 6.4011475 7.5838868 1.1104969 11.3372271 9.3101431 -0.1118510 5.9966034 9.7039954 7.0378259 9.4978728 9.1977973 6.7335686 10.8644038 4.5319366 9.1994483 10.3379149 2.2100147 NA 10.5376340 2.6954371 13.1019421 12.8274740 7.3718942 9.3792633 11.0513087 10.2573122 3.4730465 4.7293787 -0.6968914 5.6250454 9.2861095 9.3651621 7.0513090 0.6250834 6.8535928 7.4426674 9.8354719 4.6606663 10.0169319 3.3031232 12.2802169 3.2099991 4.7625455 10.0853976 6.4593513 6.5076868 10.6490755 9.6732584 8.2674567 1.8880711 14.4162476 2.1104635 11.0781088 NA 9.1964175 2.8266807 7.9397408 9.0471086 10.956212 8.602324 9.068816 10.818569 10.360431 11.531784 6.814868 11.477417 9.184995 10.907783 12.713700 11.879482 9.022505 8.173481 3.826681 8.267457 11.224771 9.7589569 4.9324723 9.0671498 9.5581444 9.1755523 9.2699170 8.0445826 5.1486047 9.8629710 11.0329490 -0.6968914 5.7949694 9.9108716 12.3685321 11.3975236 8.0926493 8.8286367 8.9269975 7.6182658 11.0574105 8.7314762 10.5079927 10.1156943 12.0075599 10.1320457 10.0479497 8.0975318 NA 9.4352364 7.7849155 11.0586294 7.0513090 10.7556146 10.0995611 7.8059076 14.4947150 11.3330933 10.6000321 12.4393861 10.2846832 8.5331362 1.7625614 TCGA-C8-A12L 67 0 NA 363 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 4 3 4 NA 1 6 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.768666e-06 3.81477e-07 10.163416 9.914648 11.373811 9.808507 8.809779 10.035439 9.287370 10.828737 12.223504 14.623051 10.158429 10.862860 0.247563 14.272532 3.306437 10.109141 5.684942 8.109658 7.671003 11.823234 NA 10.743059 1.469938 9.299444 9.989004 4.495465 NA 10.465898 12.603897 1.984516 9.149409 9.584415 0.247563 5.002423 10.313177 10.568337 9.369933 11.150163 10.406988 11.013513 7.220995 10.407408 14.791012 8.631975 8.453737 11.071435 11.768646 3.306437 4.277286 10.221951 11.068514 NA 10.989566 3.520561 5.984503 4.947975 10.879926 11.983939 9.215243 11.331681 13.322849 7.557392 11.392620 10.810628 10.821815 11.078052 4.872026 12.600316 9.299199 NA 10.512761 9.051668 3.569941 3.186136 11.512957 10.811369 11.034623 9.027803 NA 7.566456 12.581158 12.521527 8.190051 9.046279 -0.1715000 1.2582000 1.7302000 -0.0292250 1.4363000 -0.3553700 0.2841600 -0.2670100 0.2195400 -0.0587810 -0.0587810 1.0497000 1.2852000 -0.4226900 -0.4414900 1.9019000 0.4165700 0.5889400 0.1430500 0.2371500 -0.0363160 -0.0582420 -0.5079800 3.3430000 0.4752300 0.9509200 0.2055900 0.1022900 1.0803000 -0.4865300 -0.1715000 -0.5698500 -0.4343500 0.3053100 -0.4506500 -0.4267300 -0.4182000 0.5365400 0.2195400 -0.6049100 0.4453900 -0.4870500 -0.9020100 0.2298100 -0.4556900 -0.4462900 0.6312800 -0.4055500 -0.4938500 -0.4596400 -0.0575690 0.0808360 0.0841560 0.6418800 0.1031700 0.0664040 0.3448000 -0.4378200 -0.4661400 -0.4684800 -0.5079800 -1.2929000 0.1833800 -0.5728200 0.0897970 -0.5177800 -0.0014369 0.3389500 -0.082 -0.423 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.121 0.183 0.183 0.206 0.102 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 -0.434 -0.434 -0.384 -0.384 0.284 -0.396 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 0.378 -0.082 -0.423 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.121 0.183 0.183 0.206 0.102 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 -0.434 -0.434 -0.384 -0.384 0.284 -0.396 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 0.378 7.4439340 12.9116137 4.3064300 8.3785363 4.6849421 10.5687133 0.2475630 3.1220100 7.6283588 9.5111972 NA 7.2613343 8.5844154 10.9125766 10.1148156 3.5205605 5.3350008 10.5259863 8.5064952 9.7205661 9.7076856 7.9754571 10.4594252 -0.4344028 7.8499261 10.5029589 1.9845164 NA 11.2031867 3.1861360 12.4340638 12.4738487 8.2624872 10.6765948 7.0548919 9.8622466 6.2248159 1.4699381 -1.3375210 1.4699381 9.2305304 9.0343511 9.6233003 -1.3375210 11.4205476 7.0548919 9.6842484 7.1584289 10.1777814 0.2475630 10.9372437 3.4174610 6.5205558 9.1056629 5.7940207 6.2772837 7.9128726 6.8375005 7.3100329 11.2680538 13.5681964 NA 11.2226683 NA 9.7899239 3.3064372 8.5375558 8.3082330 13.835705 7.891393 8.563441 14.272532 10.507280 12.327688 11.823234 9.300105 9.778918 11.133487 13.373704 10.950287 10.221951 8.990127 1.247563 8.849926 11.840617 11.9287752 5.7606069 8.4891230 8.8756784 7.6681986 10.4835750 5.6849421 5.3904957 10.1584293 3.9105024 NA 9.0709039 8.1923757 12.6120363 11.2456571 8.2955697 8.5143235 9.4970455 6.3349990 10.4844958 9.3699334 9.4787581 9.6021536 10.7209044 11.2130806 11.5423490 9.9287752 -0.3373387 9.6759599 7.1624205 10.9895655 6.3064300 10.6600255 10.8799263 8.3113274 13.3935220 9.8337511 10.2338530 12.9100569 10.8793202 10.1039623 0.6625701 TCGA-C8-A12M 70 0 NA 358 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 1 1 NA 3 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.467973e-07 10.6594031 10.5598674 12.0641760 9.9112288 7.8762480 6.6483547 11.7145596 9.8630120 8.1756024 14.1712042 11.2008086 11.1032208 1.1014484 13.6069002 4.5933119 7.4634042 4.2713883 8.3659033 9.4301358 14.0525633 2.4233899 14.6965725 NA 9.3284389 11.7101776 7.6788895 0.6864333 8.1594526 9.3206293 3.8563483 7.9687394 5.6092556 1.1014484 6.2912849 10.2204018 9.7389914 10.2531117 8.9184444 10.0643568 12.1360878 0.1015156 11.0336755 13.9253255 8.8740887 10.6454592 11.6418310 11.6670389 4.9841017 8.2688788 9.7023029 9.5973157 NA 11.0180867 3.1014652 4.7738856 3.2713809 9.8036334 12.4154775 9.9671940 12.2798144 13.1193131 7.3060316 11.2294551 11.2851892 11.1144344 11.3160834 5.3493865 11.9926749 13.9322730 NA 9.5629401 10.3440394 3.2721875 4.0556555 11.4775862 11.5251019 12.2952941 11.6791256 NA 3.9088129 10.5908070 9.8462946 10.5797248 9.1809455 -0.0686630 3.0159000 -0.7271200 0.1007400 0.1007400 0.0000000 0.0869560 -0.0438730 -0.3790900 3.6569000 2.0516000 2.0488000 0.0513870 -0.3256500 -0.3356000 3.0340000 -0.7396700 0.0291840 2.6777000 0.3572400 0.9618500 0.0322810 0.0813220 1.1182000 3.6569000 -0.2856000 -0.2856000 -0.2856000 0.3947900 -0.0686630 -0.0686630 -0.0875790 0.1007400 0.0000000 0.0000000 -0.7834500 0.2396900 -0.0291750 -0.3790900 -0.3790900 0.0286220 0.7226300 -1.1861000 -0.0126860 -0.7324000 0.3060100 0.3060100 -0.3256500 -0.3256500 -0.3356000 -0.6822300 -0.7396700 -0.7396700 0.0291840 0.0276380 0.8848600 -0.7418500 -0.2876200 0.0135870 0.0685220 0.0813220 -0.2732000 0.3417700 -0.2856000 -0.2856000 -0.7307300 -0.0030475 -0.6998300 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 0.265 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 0.265 8.078741 11.873982 3.008343 8.736272 4.625025 11.908010 1.423363 NA 8.450189 8.459013 NA 6.879012 3.625025 10.386863 9.077309 NA 5.716171 9.790585 6.640619 11.308475 9.622384 8.246119 11.558585 1.686433 10.423389 9.202123 1.101448 NA 9.924032 4.008352 11.630647 12.028127 8.228165 10.412074 6.915242 8.784455 7.918445 3.271381 NA 2.686433 8.463405 7.686423 10.239092 2.101448 10.535953 7.396082 10.368247 5.593315 9.602303 NA 9.755202 3.008343 5.560892 9.651351 6.923108 6.020324 8.041040 8.035152 8.008351 NA 14.109189 2.560886 10.794512 NA 6.220402 4.716173 8.463405 5.787960 15.6527396 5.2713846 8.9327681 13.6069002 10.6444925 8.7844552 14.0525633 15.6244713 8.0929828 11.1685589 14.1402512 11.7267130 9.7023029 7.3960815 -0.8986189 10.3157798 11.9072046 11.3212343 7.8860959 8.5670271 9.3740905 8.3705876 11.3142884 5.0787422 9.8019005 11.2008086 5.7879600 NA 4.3109145 7.6915237 10.1594525 10.5511253 7.9902038 8.2863360 10.3176003 6.7667966 11.4126074 10.2531117 10.2378111 8.8496537 11.3505742 9.4969949 10.8212774 9.3048088 -0.8986189 8.3931150 7.0614630 11.0180867 8.3109140 11.1981759 9.8036334 7.5023402 14.1989991 10.0128527 9.4927044 12.5599956 9.7800609 10.3254624 0.1015156 TCGA-C8-A12N 58 0 NA 358 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 5 5 2 NA 2 2 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.774378e-07 10.5066071 9.5998664 11.2191422 8.4524361 8.6679340 9.5810073 9.6051030 9.7733677 10.0088958 12.4994940 10.4644224 10.2356359 3.9371466 11.9424802 2.3896769 9.8010113 6.6021124 8.5030048 9.1649572 12.8852109 3.0111557 13.8750670 4.3896632 10.2707303 10.7756917 6.1649572 -0.3107903 9.9624365 10.6125511 1.6892097 7.1527483 8.2108242 NA 3.6892209 9.2524199 9.9682538 10.7349833 12.0544525 9.6764876 10.6990523 8.7499197 11.7463692 14.6822505 7.4684505 9.6103208 11.1833292 10.7559856 4.2438138 4.1486576 8.8042672 11.6229143 1.6892097 11.3178970 3.8591446 6.6199617 5.0111512 10.2661803 11.7692084 10.5760634 12.1319080 12.5915988 8.0290735 11.0571843 10.3595656 11.0533583 10.7267706 3.8986727 12.4760038 10.4205427 -1.3107903 10.5557299 9.3158454 3.4970886 5.8185055 11.3454250 10.0066363 9.8003593 10.2798107 3.1486576 8.4689429 13.0495221 11.6775533 9.7793361 9.6177420 -0.00170690 -0.00170690 -0.00170690 -0.00629910 -0.00629910 -0.00830050 0.00958830 -0.00650500 -0.00650500 -0.74803000 -0.74803000 1.38420000 0.00680440 0.00680440 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 -0.00318590 0.00208740 0.01558700 0.01838300 0.01838300 0.01838300 0.02454800 0.02454800 0.02454800 0.01237600 0.02511000 -0.00170690 -0.00470790 -0.00629910 -0.00830050 -0.00830050 -0.00678130 -0.00678130 -0.00650500 -0.00650500 -0.00650500 -0.00063801 0.00083195 -0.74803000 0.00666530 0.00666530 0.00666530 0.00666530 0.00680440 0.01377200 0.00000000 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 0.00041593 -0.00318590 0.00208740 0.01558700 -0.73221000 0.01838300 0.01838300 -0.00683310 0.02454800 0.02454800 0.01237600 0.00819590 -0.03885000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 0.000 9.1091837 14.0758945 5.6199617 10.0863634 1.4290535 10.3647397 0.6892097 NA 8.2127857 9.5588175 NA 7.5076139 2.8591546 10.5157722 9.1537694 0.6892097 7.2590794 8.8326068 7.9676730 10.2642901 9.2672188 7.1730395 11.0758945 3.0140339 8.8815166 9.9089972 3.1486576 NA 10.5893357 2.9371560 13.5611770 12.2567044 8.5503104 10.3020921 10.1481429 9.4086125 6.0111512 1.0111378 NA 7.2928498 9.2788748 10.1017935 9.8572690 1.0111378 8.0482264 7.1568294 10.4478633 6.5284275 9.4120312 NA 10.3892298 4.2438138 4.7553149 9.8854016 6.4394287 1.8591347 8.9907198 7.0599112 4.7977497 0.6892097 14.2841022 0.6892097 9.8925717 -1.3107903 9.2581297 4.9746257 8.1588656 8.5840414 13.010598 4.389663 8.865397 11.942480 10.383233 10.357222 12.885211 12.180576 9.315845 10.305313 12.635399 9.344754 8.804267 9.369583 -1.310790 7.717129 10.817862 11.1107626 7.1280160 9.1070761 9.2206052 7.6199610 10.3294685 6.7226464 7.4771260 10.4644224 7.9132251 5.1970201 6.0467748 6.9131288 11.6271491 10.1679932 9.3697326 8.8313307 9.8268553 4.2127872 11.5937059 10.7349833 10.9014160 10.1337210 11.0260091 9.4154418 10.3062318 8.7032440 -0.3107903 9.2170133 2.5961241 11.3178970 8.5703377 10.9255369 10.2661803 6.3185808 14.0812056 10.4432760 10.6214384 12.7837137 10.4933546 9.6586101 1.0111378 TCGA-C8-A12O 50 0 NA 385 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 1 3 1 NA 1 5 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 10.05545300 10.20981607 11.44692081 9.78070609 8.71264736 9.34333720 9.38765958 10.10519785 10.35669933 13.59213731 10.65496319 10.58154850 0.50812436 12.34452128 2.75599848 10.27791421 4.95101888 8.55656315 8.50101471 12.23642209 4.67799864 11.69836405 5.42693897 9.31017264 11.39948035 5.10798910 -1.49207854 8.69047087 11.59188807 2.83001188 8.22060324 7.84346698 NA 5.32825485 10.13469802 10.69604695 9.31382018 9.43659475 9.71264754 11.72784993 0.09301923 9.64634810 15.77849946 7.36820087 8.82661903 11.44213574 11.66289446 3.83000173 2.41497438 9.23173743 10.51159425 -1.49207854 11.74483804 5.24954394 7.47962023 5.18050197 9.75005960 11.36819339 10.00293200 12.94205294 12.64378565 7.76781963 10.87193734 10.46792981 11.04820444 11.16226487 4.99992786 12.02118709 11.60676649 0.50812436 10.67486710 9.25878342 1.80525118 6.39681882 10.38190499 9.95101991 10.44508232 10.97975157 3.46227486 6.83000427 12.54106912 11.34885427 9.65845840 9.06458246 -0.0274430 0.1645500 0.2433200 0.3022900 -0.0618680 0.8381800 1.1711000 -0.2380400 -0.2378100 1.8775000 1.8775000 1.3326000 0.2672100 0.2727900 0.2928900 3.6569000 -0.0062740 0.3384700 1.5927000 -0.2736000 0.1808100 0.2439900 -0.3501100 0.2513100 0.2513100 -0.0901400 -0.0901400 -0.0901400 0.4128200 -0.1016500 -0.0274430 -0.0358580 0.3022900 -0.0675120 -0.2471900 -0.5785500 0.0195970 -0.2380400 -0.2378100 -0.2684000 0.0667470 0.0768070 -0.3151000 -0.3022000 -0.3022000 -0.3022000 -0.3022000 0.2727900 -0.3711300 0.2497500 -0.0878880 -0.0072343 -0.0072343 0.3384700 0.2390200 0.2390200 -0.2736000 0.1576600 0.2439900 -0.0424780 -0.3501100 0.2513100 -0.0479810 -0.0901400 -0.0901400 0.4167500 -0.3911100 0.6615500 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.350 -0.099 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 0.000 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.350 -0.099 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 0.000 9.11725504 13.97867170 5.70774840 9.71935630 4.04847162 9.62766593 -0.49187564 -1.49207854 8.31220727 7.78187178 -1.49207854 8.69760460 4.91746517 10.33700623 9.07413049 2.20851726 7.95928736 9.69419054 8.07603259 10.33938361 9.34512089 7.07793192 11.14379447 4.12278866 10.93852891 10.28943612 8.59951158 NA 10.84792638 0.83001188 12.59255262 12.45086575 8.29434597 9.62766593 9.03163835 9.22146290 6.35356678 1.83001188 -0.49187564 2.31542132 8.14651216 8.72239566 9.33223956 3.59553946 7.84547500 7.88528699 9.72118055 7.75125013 9.90895578 1.50807364 9.73207803 4.15193186 4.09303614 9.52574082 8.01051020 6.12278659 9.23088387 7.83000427 9.08833482 1.96750065 13.60310245 0.09301923 10.65941014 -0.49187564 9.17341231 5.06266573 8.29271136 8.73689504 15.1047846 6.2223216 9.8288768 12.3445213 9.5722330 10.9217043 12.2364221 12.7383220 8.9705788 11.2334426 12.6953511 11.0291860 9.2317374 8.6074243 0.8300119 7.9238183 11.5679278 10.7654642 6.6373596 9.1725238 8.9046813 9.5394330 9.4266489 7.4910698 8.7332838 10.6549632 7.1840333 3.9675099 4.6165988 8.0418929 12.8976405 9.9211754 9.2373486 8.1465122 11.1505794 7.3346246 10.6127734 9.3138202 10.3346248 9.8003979 11.0009310 9.7089750 10.2317373 9.2154354 0.5081244 9.1732614 7.1910711 11.7448380 8.9939056 9.4021361 9.7500596 7.0277125 13.5979820 10.2754333 10.0760325 12.8105011 10.0291860 8.9756821 1.9675006 TCGA-C8-A12P 55 0 NA 358 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 4 NA 1 3 2 6 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.989553e-06 9.499515e-07 10.328048 10.122850 11.035727 9.375298 8.429070 8.894016 9.659210 9.757381 12.205594 13.726682 9.365303 10.205010 -1.387978 15.725960 1.419431 9.630286 3.312520 8.197049 6.617711 11.833069 -1.387978 7.363630 7.071518 10.337878 10.307314 5.482451 2.612093 8.572088 11.637226 2.197048 8.390163 6.746513 NA 5.494729 9.911867 11.143955 9.288043 10.137607 9.625409 11.110935 NA 8.075611 15.609839 7.179433 9.427469 11.014032 10.532067 3.741370 1.934026 9.956382 12.201854 -1.387978 11.024656 5.506903 5.978408 5.340007 8.780758 11.558810 9.390163 11.422457 12.608471 7.038351 9.986039 9.466175 10.419843 10.892277 4.782010 12.356605 8.642753 -1.387978 10.324183 9.354396 1.316957 6.021478 10.951101 9.869474 9.594367 9.558261 2.612093 8.293324 12.852356 10.410558 10.043584 9.607146 0.214920 1.460700 0.413660 -0.155720 1.380800 -0.130240 0.352270 0.865440 -0.131790 0.258330 -0.636080 3.656900 0.248490 -0.081224 -0.173280 0.551160 0.551160 0.126760 0.000000 -0.204040 2.446800 -0.210750 -0.286490 3.656900 3.119000 -0.031010 -0.031010 -0.300920 0.191100 -0.224590 0.214920 -0.196050 -0.155720 -0.564600 -0.140830 0.352270 0.352270 0.659500 -0.513260 -0.158150 0.487510 0.302590 -0.599780 -0.221140 -0.221140 -0.167450 -0.185170 -0.081224 -0.081224 -0.232080 0.551160 0.144220 0.144220 0.000000 -0.225690 0.131920 -0.552210 0.194470 -0.197930 -0.269160 -0.286490 -0.315340 -0.542540 -0.031010 -0.264010 0.152410 0.177620 0.129560 0.223 0.223 -0.176 -0.032 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 -0.151 0.263 0.152 0.152 0.894 0.120 0.232 0.232 0.000 0.000 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.000 -0.600 -0.160 -0.167 -0.167 0.000 0.000 0.223 0.223 -0.176 -0.032 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 -0.151 0.263 0.152 0.152 0.894 0.120 0.232 0.232 0.000 0.000 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.000 -0.600 -0.160 -0.167 -0.167 0.000 0.000 8.3314750 13.6765762 4.3669726 8.9957903 3.2559388 11.4475444 0.1971105 1.7820311 8.9795009 8.5249753 NA 7.6703213 3.0715224 10.4032490 8.7232217 1.9340258 6.7769936 9.2092075 8.5472512 10.1781401 8.4276133 6.9608140 11.1805173 1.4194310 9.5076613 9.8475020 0.1971105 NA 10.3782009 0.1971105 12.5111597 12.4869714 7.9452413 8.4947292 9.3107907 9.6099712 6.5069034 2.6995516 -0.3879778 -0.3879778 9.2595446 9.4947292 10.6785117 0.9340258 9.2279824 8.5619126 9.4575760 6.0959012 9.0827449 NA 11.5915113 3.2559388 3.1356498 8.9608586 7.6190571 6.3400067 9.4178299 8.4716208 8.1512449 9.0446280 13.3440414 -0.3879778 10.7041825 -1.3879778 9.3602789 4.5893680 9.6156041 8.6134945 11.6495816 8.3073142 8.3552374 15.7259605 9.6680462 11.7147180 11.8330689 10.0565834 10.0918663 10.6152526 13.6929036 10.7378224 9.9563820 9.1599445 -0.3879778 9.5008293 10.6905705 10.9164374 4.8019088 8.8300439 9.4354534 8.5383822 10.1144007 6.5368984 4.1666753 9.3653028 8.8433071 0.9340258 9.2101385 7.2340644 12.4105579 10.1970486 7.4097473 8.8492959 9.1502751 6.6995489 10.0106801 9.2880431 11.1490617 10.5512980 10.8951745 9.8372935 10.8099171 9.3819240 NA 10.1678879 7.3400067 11.0246559 8.4962566 10.1405402 8.7807582 7.7232220 13.3694240 10.7222431 10.9404805 11.8019106 10.7202838 9.0022550 2.3125200 TCGA-C8-A12Q 78 1 385 2 breast stage iiia t1 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 1 NA 1 6 2 6 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.496941e-06 7.629541e-07 10.0584629 10.3314258 11.7048372 10.1427862 8.3152909 9.6848301 10.6134986 10.2587616 10.4167634 14.2717101 9.7804883 10.7493017 -0.1590736 17.2356285 5.1507627 9.0454801 4.3003434 8.3125844 6.3327616 12.1155784 -0.2129019 11.1944235 7.6331573 9.1035050 10.8588773 7.5980212 -0.7439555 8.0568463 12.3233809 1.7153663 7.3354314 7.8390293 -0.7439555 5.4056929 9.8998028 11.3667561 8.9511748 11.4311842 11.0880454 12.2033095 2.7795119 10.1822426 15.1527874 7.3153181 9.8100078 11.0237172 10.7728777 3.7795119 4.7316775 9.9221706 11.2694437 NA 11.3083448 4.6822137 7.0600777 5.6046733 10.9910795 11.8299487 9.5168661 12.0853720 12.9997817 6.8521362 10.8572531 10.2607604 11.2380489 11.4052174 5.1628384 12.2827293 10.0705290 1.8409264 11.0973144 9.5699632 2.5091891 5.9141579 10.6331571 10.1903746 10.2619219 10.1274668 2.8997943 9.5648545 12.5615096 12.0034053 8.5665595 9.6019061 0.01251600 3.65690000 -0.00705760 0.47718000 0.44528000 -0.00816240 0.68980000 0.45837000 3.03990000 0.00416320 -0.01450300 0.00866750 0.49926000 0.02960600 -0.46014000 2.64220000 1.43020000 0.01530800 -0.03502100 -0.00940460 0.01335300 0.00917050 -0.46323000 3.65690000 0.25996000 0.55974000 -0.46195000 -0.00981850 0.50933000 0.04287400 0.01251600 0.01349200 -0.48187000 0.01265500 -0.00512270 -0.00027724 -0.00857660 0.45837000 -0.47003000 -0.48565000 0.46776000 0.53169000 -0.46940000 -0.45018000 -0.44674000 0.00055459 0.00263570 0.00180300 0.46092000 -0.47564000 -0.45458000 -0.47416000 -0.47416000 -0.03502100 -0.03502100 0.01098200 -0.00940460 0.01335300 0.01195800 0.02763800 -0.46323000 -0.46376000 -0.18986000 -0.50214000 -0.46195000 0.30134000 -0.46089000 0.03750000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 -0.202 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 -0.202 8.7337048 13.6300691 5.9141579 9.3631636 3.7294114 11.1209065 2.2559539 0.5778276 8.3657774 7.5778744 -1.7441972 8.0826382 4.4653999 10.9177247 9.5574428 1.5778759 8.7235521 9.4865676 11.2172154 10.1944235 10.0827691 8.3500242 11.1293907 3.3434078 7.1416433 10.0434410 3.5413538 NA 11.2527731 2.2559539 11.7125577 13.0134408 8.3500242 10.6592249 8.7286375 8.5109750 4.1628384 2.3434078 -0.1590736 1.4258889 8.4823586 8.6493370 10.8747909 4.0888370 12.2600678 7.4605173 9.3440722 7.3247251 9.7518016 NA 10.9393798 3.4258755 4.1385933 9.9488715 6.3200423 5.8925707 8.4580703 8.6057806 7.0307333 1.9563913 13.0153147 1.8409264 10.7738619 -1.7441972 7.4457714 5.3434078 9.2566507 9.8516702 13.089544 6.174810 9.495545 17.235629 10.779509 10.550854 12.115578 9.350684 10.298926 10.954217 14.688391 9.168087 9.922171 8.123225 2.343408 8.798978 11.409815 11.372778 6.711273 9.075327 8.710246 8.344735 10.292968 7.104569 5.374886 9.780488 5.977046 8.598021 7.275537 7.635563 11.198828 10.305114 7.579744 8.035666 10.356609 6.043850 9.816504 8.951175 10.005816 8.938063 10.564570 10.397734 10.727876 8.895287 1.425889 9.315669 6.626633 11.308345 7.899803 11.423678 10.991079 7.781467 13.147018 10.094363 9.579001 12.238049 10.143929 9.508021 2.063296 TCGA-C8-A12T NA 0 NA 0 breast stage iia t2 n0 m0 female 2010 NA NA infiltrating ductal carcinoma 0 asian not hispanic or latino 1 3 1 NA 2 5 1 2 4 2 1 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 3.953489e-06 9.710324e-07 9.3721716 9.5816510 11.5953932 8.3078652 8.1788351 8.3398821 10.6530761 10.3928265 10.7770134 14.5024219 11.0880841 10.7169468 -0.1699070 15.3781463 2.6374711 9.5681994 7.8413341 7.9307693 6.7004716 12.6606223 NA 13.8038044 2.4150826 9.6029330 11.0821811 5.5443525 1.4150555 8.4592996 10.6011838 1.6374711 8.0224000 7.4739630 -0.1699070 3.3536620 9.3634368 9.7512041 9.8378351 11.3880494 9.7211313 10.4244317 11.3940183 10.4963310 15.9234937 6.9179938 9.9792191 11.2579437 9.9002280 3.9593900 5.2895394 8.4374375 11.0851356 NA 11.5937344 6.0199309 5.2730496 5.5166077 10.1904055 12.2525661 10.5231584 11.7497153 12.2067751 7.6470907 10.9545515 10.2748114 10.3224610 10.9115905 4.0757551 11.7004718 11.9747653 -1.1697447 10.3702351 9.8195015 0.9577661 5.1699571 8.9937567 9.9638915 10.1390148 9.5799764 3.4150691 8.3575841 12.2743455 12.2233634 9.8009319 9.5426342 0.0189430 0.0189430 0.0189430 0.0024346 0.0087528 0.0256710 -0.0634100 -0.0162920 -0.0162920 0.6381000 0.6381000 1.3415000 -0.0145030 0.6562700 -0.0089906 0.6890600 0.6890600 0.0011093 0.0011093 -0.2716900 0.0054139 -0.0151910 -0.0278080 3.5420000 0.0000000 -0.3006300 -0.3006300 2.8249000 3.6569000 -0.0227440 0.0189430 -0.6630000 0.0087528 -0.0234290 0.0023581 0.0052749 0.0052749 -0.0162920 -0.0162920 -0.0162920 -0.2281000 -0.2451500 0.6381000 -0.3626100 -0.3626100 -0.3626100 -0.3626100 0.6562700 0.6081900 -0.0089906 0.6890600 -0.7279300 0.6428600 0.0011093 0.0011093 0.0011093 -0.2678100 0.0054139 -0.7474800 -0.7768500 -0.0278080 -0.6944100 -0.0008316 -0.3006300 -0.3006300 -0.0228810 0.0012481 -0.0385780 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 0.000 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 0.000 8.8921533 14.8362139 5.8413341 9.8914783 1.6374711 11.4042275 NA -0.1699070 8.5025323 10.1015701 NA 8.1632622 1.6374711 10.2920980 9.3279588 3.8301032 5.3379002 9.2288507 10.3546487 11.3548936 8.8715061 9.1744029 11.4445868 1.9226546 7.6406788 10.2547982 9.3229617 -1.1697447 11.3704773 2.2895394 14.2144524 12.7271016 8.1039025 9.7689515 8.4539887 9.7915567 4.4150691 1.6374711 0.8300930 -1.1697447 8.6163768 10.3043199 10.2730505 0.4151096 7.2390314 7.3731392 9.7226499 5.8301082 9.8635301 0.8300930 9.6748128 4.4739622 2.6374711 9.3900290 6.3966938 3.0780291 8.5715740 7.8413341 8.1270234 2.4150826 14.3392326 -1.1697447 11.1350288 NA 7.7872091 3.2895394 7.9360154 8.6502860 13.205866 5.772622 8.301782 15.378146 9.602422 10.610237 12.660622 11.517264 9.661723 10.385655 12.895860 10.554195 8.437437 10.206232 -0.169907 7.584995 11.303052 11.2416180 5.9798539 9.0444261 9.0827726 8.3497434 9.9906025 6.5095866 8.4037543 11.0880841 7.1520353 1.8300930 5.8853889 7.9468671 11.7213212 10.1424228 9.0945496 9.4411319 9.6366567 4.9175702 10.6991109 9.8378351 10.4658252 10.3904399 10.8914783 9.6486892 10.4328059 8.3179471 -0.1699070 8.9968601 4.9175702 11.5937344 8.7623219 9.9135864 10.1904055 7.2268399 14.6342381 10.9175699 9.6802939 11.9761984 11.6009774 8.9937567 0.4151096 TCGA-C8-A12U 46 0 NA 385 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 1 4 NA 1 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 2.427581e-07 9.838664 9.449070 11.971389 8.573857 10.094639 9.315400 10.255404 10.382848 9.241039 14.853390 9.153898 10.968278 2.375818 12.074236 2.790855 7.980683 6.398190 8.233802 10.883285 12.631538 1.375846 13.918329 NA 9.916272 11.240265 9.567292 6.470338 8.527260 11.213974 -1.209228 7.463284 5.477360 -1.209228 3.112784 9.294684 9.203429 9.061154 8.967032 9.218171 10.882955 1.112767 10.360714 13.635417 6.832134 9.749411 10.595796 10.324675 5.076260 7.840707 8.846141 9.223401 NA 10.445942 3.598210 6.813226 4.721597 9.523026 12.256297 9.637916 11.009725 12.562658 7.318336 11.069598 10.196000 11.115039 10.717896 4.148414 11.716784 9.101471 NA 10.809059 9.816690 2.492417 4.217122 11.576720 9.485216 10.464609 10.150059 2.878313 9.972632 11.687380 9.848850 9.283713 9.023279 0.0143300 -0.4358300 0.2657900 0.5241500 0.6238800 -0.0235480 -0.4816500 -0.0047079 -0.3579500 -0.4574700 -0.4574700 1.4207000 0.0101460 -0.4411300 0.9322300 -0.4463100 -0.4463100 2.2137000 3.6569000 -0.4482500 0.4789000 0.0308730 -0.4337700 -0.4337700 3.0905000 0.0389130 -0.0794760 -0.2267500 0.4151300 0.0143300 0.0143300 0.9015000 -0.0808070 0.4331300 -0.5247100 0.0108420 0.0000000 0.0214630 -0.3579500 -0.4091100 0.0216030 -0.0015243 -0.4638100 -0.4682300 -0.4474500 0.3278500 0.3278500 -0.4411300 -0.4411300 -0.4294200 -0.4463100 -0.4463100 -0.4696100 -0.4344200 -0.4413500 -0.4413500 -0.4482500 0.0054139 -0.4611000 0.0016642 -0.4478200 -0.4337700 0.4520700 -0.3931900 -0.2267500 0.4151300 -0.8932700 -0.4448800 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 0.000 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 0.000 8.3550079 9.7837970 5.8020846 8.8569477 3.5457460 10.7428718 2.4912887 -1.2092280 8.8941463 5.9201408 NA 4.5982163 NA 11.2239224 9.3879800 4.0387873 6.8676741 9.6221659 9.3367884 12.0916401 10.7258395 7.3870480 9.7052438 0.7908554 8.2907045 9.4009607 1.5982223 NA 12.2700073 3.0387873 11.9763535 12.8411324 5.9507297 9.2986533 9.6142258 10.3706459 2.6977516 3.4347083 NA 9.5868981 8.4129102 8.3981887 10.5089633 1.3758457 10.4455080 7.7852118 10.4681378 7.4912984 11.3981889 NA 7.2338018 0.7908554 4.5722167 9.7709910 8.6609614 5.8993835 8.5204792 8.0364116 7.2420699 NA 13.1300127 -0.2090612 11.1234547 NA 8.0003122 2.5982223 8.1060080 8.3454474 10.897094 6.883616 9.698500 12.074236 9.753755 10.989917 12.631538 13.182841 8.702251 11.618400 11.827547 9.975734 8.846141 8.368287 1.598222 9.034033 11.233025 11.4197598 6.0762598 8.9557656 9.0646541 8.5474147 10.7928227 6.1484115 9.8948020 9.1538983 7.3338906 -1.2092280 6.5051033 8.6951319 7.6887042 10.6856763 8.4685784 9.5179282 8.2002493 6.4773584 10.1251989 9.0611541 10.9288104 10.1566343 10.5365329 8.6158172 10.8832854 8.4615151 -0.2090612 9.1456589 7.0148607 10.4459421 4.8352521 11.6443631 9.5230259 7.0148607 13.5230790 11.3798074 9.9917572 11.3776984 10.3986512 10.1105307 1.5982223 TCGA-C8-A12V 55 0 NA 385 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 asian not hispanic or latino 4 4 2 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 9.9814944 9.4987272 11.4054021 9.9493096 9.2292086 9.9344394 7.9145729 10.0169347 10.3203366 12.3502241 10.0853061 10.4962990 1.0197731 10.6050934 1.6978183 10.5546418 7.3452855 9.2714745 11.6483831 5.6751074 NA 10.1314126 8.6621681 9.7078378 10.4038914 8.6520236 4.4257480 11.9947004 10.9203202 2.6047119 8.1916826 6.9552151 -0.3022262 6.7090549 9.3506723 9.3569312 9.2752560 10.4808254 9.2790278 10.6512962 1.5051796 6.4987264 14.7874018 7.1712489 8.7571716 11.0360065 10.1459435 3.9832308 NA 9.0912177 11.1881767 -1.3022262 10.1991668 6.0553801 9.0454487 5.6978266 10.4979182 11.8105925 10.1008392 10.7984895 12.8006231 6.4726145 10.2360161 10.0839214 11.1539249 11.4066956 4.4791853 12.4190332 9.3434856 -0.3022262 10.7094039 9.6137066 3.2839958 7.0772056 11.1610961 10.4853217 10.7319383 10.1177874 3.3982683 6.0287437 13.4134139 12.7223609 10.4316899 9.6263455 0.1587600 0.1587600 0.1587600 0.0012481 0.1688000 -0.0690550 -0.0083005 -0.0018014 -0.0018014 0.2331800 0.2331800 0.2331800 -0.0736100 -0.0018014 0.0072217 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0212350 0.0000000 -0.0760120 -0.0461770 -0.0461770 -0.0461770 0.1014700 0.1014700 0.1014700 -0.0854570 0.1587600 0.1587600 0.1132700 -0.0762060 -0.0690550 -0.0841190 -0.0083005 -0.0083005 -0.0018014 -0.0018014 -0.0897310 0.1260900 0.1260900 0.2331800 -0.0171160 -0.0171160 -0.0171160 -0.0171160 -0.0018014 -0.0018014 0.0072217 0.0072217 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0515860 -0.0368100 0.0000000 -0.0760120 0.0035880 -0.0461770 -0.0461770 0.0076548 0.1014700 0.1014700 0.2827900 -0.0745440 0.0709450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 0.000 10.4321134 13.1775443 NA 9.7111499 6.1390294 11.1277569 5.1735592 1.0197731 9.2046306 9.9981797 1.0197731 7.8750723 7.6836691 11.0890708 9.5378183 1.8677384 8.7048543 11.1029687 7.8999508 9.4172160 9.5499275 7.4460204 11.1436180 4.0197553 8.3631632 10.6359365 2.8677581 NA 10.9840961 2.6978183 12.7786447 13.1133709 8.9809156 9.7524315 11.7307339 9.5075953 4.0901421 4.4257480 NA 4.9266447 8.8802214 9.6815334 7.8399344 5.4791885 9.4093566 6.0016086 9.6039662 4.5558100 10.5405704 6.0465544 10.5831423 4.0197553 4.1896823 9.7642124 6.0445187 8.5511368 9.9872698 10.3000620 10.5456676 -1.3022262 13.1475562 3.6047237 10.2995980 -0.3022262 9.0520765 4.5804711 8.7544650 8.7517529 11.279329 8.457715 8.159307 10.605093 10.286542 9.942786 5.675107 9.121993 8.753110 10.643271 13.332185 11.545472 9.091218 7.452715 1.867738 7.625605 10.638508 10.692534 3.090142 8.958747 9.379066 7.189680 9.569717 9.495489 8.248574 10.085306 6.758523 2.282796 5.697827 8.920948 13.040805 11.408418 7.683669 7.766606 10.215004 9.852012 11.069492 9.275256 10.916390 9.824532 10.918810 10.341683 10.448953 8.305157 NA 9.765759 10.083690 10.199167 7.890120 10.883431 10.497918 8.149038 14.195960 10.638508 10.418071 12.482258 11.314606 9.100839 5.072865 TCGA-C8-A12W 49 0 NA 385 breast stage iiib t4 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 3 1 NA 1 5 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 3.121176e-07 9.7707356 10.0020611 11.8536629 9.6190492 8.5426295 8.7621564 10.3566481 9.8491131 10.4816644 15.0911660 11.2024272 11.4120805 2.5950978 13.1147331 1.9576546 10.2456358 5.4742413 8.3876546 7.8698911 12.3474775 -0.2122332 13.4891026 -0.2122332 10.2197514 11.4526336 7.9726174 3.9576639 11.5668457 11.7276884 3.1096782 10.0480735 7.1186587 1.7877250 6.4812295 9.1474914 10.8688925 9.6127006 10.2265338 9.1800593 11.3592576 6.4459534 9.6619550 16.0804500 7.4565557 9.7214104 12.5338363 11.7641271 3.2471680 2.4881808 9.2337913 10.2124332 -1.2122332 10.6316630 6.0356701 6.6581072 5.2634739 10.1578845 11.5015580 10.0468967 11.4515224 12.5212870 6.9272932 10.6569502 10.0070074 10.9362185 11.4636990 5.5019868 11.0521846 8.4724906 NA 10.3452056 10.3495073 3.3935947 6.1886205 11.2134824 9.9008330 10.4477379 10.4994089 5.2955357 8.6673252 11.7813880 10.9378066 10.0309159 9.2223701 -0.192240 0.386340 0.386340 0.236590 0.000000 0.151590 -0.495800 0.171810 -0.416300 1.856000 -0.524810 1.526200 0.333990 -0.241190 -0.170820 3.381500 -0.205730 1.268000 0.139870 -0.058462 0.450540 0.063223 0.354300 0.354300 0.354300 -0.358180 0.138350 0.138350 3.282800 -0.192240 -0.192240 -0.154920 0.178560 0.076928 0.022304 -0.465360 -0.041159 0.171810 -0.416300 -0.416300 0.097833 -0.154530 -0.501620 -0.201120 -0.201120 -0.201120 -0.208230 -0.241190 -0.297740 -0.170820 -0.170820 -0.131990 -0.181560 1.268000 0.094231 0.094231 -0.066078 -0.421450 0.063223 0.381550 0.346200 0.354300 -0.216270 -0.358180 0.138350 0.027638 -0.774730 0.485870 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.000 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.779 2.280 -0.201 -0.201 0.000 0.000 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.000 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.779 2.280 -0.201 -0.201 0.000 0.000 9.1040234 14.5398089 7.9576668 10.2119082 3.5852751 10.6285199 -1.2122332 0.3727293 8.3689425 6.7066051 NA 8.6734384 1.1096949 10.4093360 8.9763307 6.2055939 7.0545283 8.9971953 9.1017588 11.6420299 9.2460563 7.8375907 10.5983136 4.1800603 9.2181946 10.4579556 5.7066051 NA 11.2868404 2.5950978 12.0352245 11.9640710 6.9526492 9.2150549 8.0474849 10.1225739 5.9676505 1.1096949 0.3727293 8.6158786 9.1275920 10.0574531 8.1540642 1.7877250 7.4812287 7.8538310 10.6665592 7.4024519 9.8625524 NA 10.2040117 5.3575977 3.9576639 8.9871813 6.1208972 8.0427707 8.7243798 9.1960717 10.2553475 1.3727293 13.2994946 NA 11.3526059 NA 8.3556982 4.4881808 7.3113042 7.8910297 14.512106 5.658106 8.299495 13.114733 9.714779 10.481664 12.347478 12.456073 9.220284 11.976022 12.321802 10.255857 9.233791 8.837590 2.875210 7.924733 12.593587 11.1372997 6.9726168 8.3839319 9.1186587 10.1000577 10.6381281 7.2223699 9.5334164 11.2024272 7.7735837 -0.2122332 4.7419361 9.2144993 12.5263620 9.6650260 8.8923406 9.3537959 11.3105686 8.7243798 9.8393112 9.6127006 9.4070449 9.5105496 11.3611525 10.2700458 10.7845685 9.8877472 3.3727014 9.2390973 8.5442984 10.6316630 8.6379286 9.8031570 10.1578845 7.5854035 13.0331461 10.0783368 9.6441674 12.8409042 10.3750507 9.4288905 3.9971930 TCGA-C8-A12X 62 0 NA 385 breast stage iib t2 n1 m0 female 2010 NA no mucinous carcinoma NA asian not hispanic or latino 3 1 5 NA 3 5 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 3.467973e-07 9.6554856 8.9843467 11.3172988 8.6541981 8.9064580 8.4106116 10.3937376 10.2477226 10.6438562 14.6913528 10.2587779 10.9193778 NA 12.0337003 5.4075567 10.2955790 6.4556527 7.7823031 8.9719984 12.4714559 0.5248661 14.5930216 NA 10.2671404 10.6308236 8.6017307 4.4318035 8.6229472 8.8824670 0.5248661 9.4659626 6.0327092 NA 4.1687704 9.6847865 9.4674297 9.8264114 8.7196719 11.1136297 11.5963775 NA 10.8178119 14.5273786 7.0597241 11.4571299 11.5171454 10.5445059 2.8468343 7.2460147 8.2460142 10.0386428 -0.4751339 10.1723735 4.4318035 4.4318035 3.9172312 10.0650431 11.2968172 10.2764592 8.5693092 11.8879548 9.1633510 11.1373229 10.9354354 11.1442181 10.7035800 4.2798056 11.0077231 9.0833357 NA 10.4182166 8.7846584 1.8468343 4.9172312 10.9970982 9.7917016 10.5277301 10.1822336 8.1795514 6.0167682 10.8541508 10.1705736 9.8736433 9.3450941 -0.79285000 0.00861350 0.00861350 0.05765300 0.05765300 0.01237600 -0.00866380 0.38849000 -0.80136000 3.65690000 3.65690000 0.42553000 0.01084200 -0.00249380 0.00041593 0.00041593 0.00041593 0.04442100 0.04442100 -0.08226900 -0.79469000 -0.39697000 0.02104300 0.02104300 0.02104300 -0.04455100 -0.04455100 -0.04455100 -0.01161100 -0.00567570 -0.79285000 -0.37651000 0.05765300 0.00055459 0.01237600 -0.80319000 0.00986690 0.38849000 -0.80974000 -0.82415000 0.04372300 0.04372300 -0.78260000 -0.38957000 -0.38957000 -0.38817000 -0.39780000 -0.00249380 -0.01231700 0.00041593 0.00041593 0.00041593 0.00041593 0.04442100 0.03524200 0.03524200 -0.05185600 -0.79469000 -0.38392000 -0.01037000 0.02104300 0.02104300 0.08999600 -0.04455100 -0.04455100 -0.01161100 0.00000000 -0.01986300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 -0.123 7.2253550 11.6363768 3.3322640 9.0227670 1.0856286 11.0727736 NA NA 8.9321829 6.6541978 NA 6.1098766 NA 10.3641189 9.2339990 -0.4751339 9.7135039 9.0167682 9.8114730 10.9564128 9.7507854 7.8423277 11.8004577 2.1098620 11.2600480 10.0057054 2.5249162 -0.4751339 10.7704678 4.8103197 12.6301689 13.0380258 7.2663818 10.2722689 10.1866932 9.4060291 0.5248661 1.1098954 NA 4.5693088 10.7153572 10.7746212 10.5333438 1.8468343 7.5693096 7.7728424 10.6682983 7.2663818 10.1946859 NA 10.5869613 -0.4751339 4.7728411 9.8900127 8.1250513 3.3322640 11.4276671 8.1506242 12.8241231 NA 13.1839076 1.5249162 11.5734020 NA 5.4556527 5.7917021 7.8332544 9.0909690 13.442287 6.332269 8.833254 12.033700 9.709791 10.499330 12.471456 11.618663 8.942768 10.702335 12.079504 9.612378 8.246014 7.596378 1.524916 7.273108 12.794480 10.460080 5.332271 8.154272 9.056297 9.006715 10.049359 4.984348 9.759733 10.258778 6.633440 4.225352 6.959543 9.826480 9.409086 9.672120 8.796378 9.870320 10.853029 4.524916 14.352947 9.826411 10.130395 10.157002 9.672120 9.050436 10.154272 8.519269 3.332264 9.419278 4.332271 10.172374 5.502194 10.314449 10.065043 6.536143 12.335888 10.707309 10.231411 12.229899 10.544506 8.833254 2.694836 TCGA-C8-A12Y NA 0 NA 1476 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma NA asian not hispanic or latino 3 1 1 NA 1 1 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.121176e-07 9.8561388 8.5614644 10.7688641 6.2677324 9.0008152 9.4627194 9.3736323 9.4422473 9.4411012 12.8214966 11.1335385 10.0074110 0.7285736 12.7592989 3.2728891 10.9392457 7.8732325 7.8195686 8.0978083 13.2929223 NA 14.1252683 5.5359285 10.3250747 10.8501078 4.8018209 NA 8.8018234 10.7075231 1.1435893 6.9637908 7.7058542 NA 3.1436057 8.1322966 9.7788765 7.5337806 10.4431061 8.6244022 9.8414481 2.8984986 11.5339152 13.9905713 6.9043986 9.0713897 10.4867975 9.8976641 3.7285736 2.6671655 9.4445362 10.6528920 NA 11.3545875 4.2521356 4.0978046 4.4655370 8.8876048 11.9404626 10.6469407 11.6590653 12.1571962 9.2204274 10.9146886 9.9294729 10.4703222 10.3188495 1.4655566 12.8301671 10.5091141 -0.8564760 10.9824218 8.6009926 2.6160989 3.6030388 8.4045315 8.8535572 9.6745058 8.6612811 1.3135361 8.1756573 12.7910703 11.8691911 9.0300706 10.0353956 -0.01130200 1.13860000 1.19170000 0.00350250 1.89530000 0.01687900 0.01171300 0.00642090 0.00642090 -0.00453590 -0.00453590 -0.00453590 -0.00574300 0.01073700 0.00628190 3.60120000 3.65690000 -0.01790700 -0.00033835 -0.69692000 0.01520200 -0.35997000 -0.01832000 -0.01832000 0.00017232 -0.04858000 -0.04858000 0.99161000 0.61533000 -0.01130200 -0.01130200 -0.01157800 -0.70964000 -0.02069600 0.01506200 0.01171300 0.01171300 0.00642090 0.00642090 0.00000000 0.10734000 0.10661000 -0.72877000 -0.01199100 -0.01199100 -0.01199100 -0.01199100 -0.00204470 -0.00204470 0.00628190 0.00628190 -0.36054000 -0.36628000 -0.01790700 -0.00033835 -0.00033835 -0.69692000 0.01520200 -0.18595000 -0.72161000 -0.72241000 -0.01832000 0.01548100 -0.04858000 -0.04858000 0.63943000 0.02000000 -0.70949000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.442 -0.688 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.139 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.442 -0.688 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.139 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 7.6294411 13.2126419 7.4542244 9.5000639 1.1435893 11.1869810 -1.8562148 NA 8.9645884 8.0185930 NA 6.9151014 5.0624758 11.2568657 8.8397099 3.6354642 5.1208910 9.0550039 6.8681262 12.1949907 9.0740240 7.7946634 10.3651990 1.9509536 7.4587618 9.7615384 5.5865546 NA 10.6178247 1.6030269 13.1245101 12.5225840 8.1988944 9.6494234 11.8325177 10.0418353 3.0505017 -1.8562148 NA 3.3135361 8.9859623 10.9729382 8.5099341 2.2310637 7.7091900 7.5077463 9.7711458 5.5444916 9.7388693 NA 9.8539879 -0.2714264 3.0978130 10.2683859 7.1695262 3.3915340 8.5186512 6.6394666 7.1548394 1.6030269 14.2519933 1.1435893 10.4703222 -0.8564760 9.0824562 4.8018209 7.8036074 7.6827706 14.715065 7.157632 8.629441 12.759299 9.548221 11.456637 13.292922 11.389907 11.442592 10.126249 13.013109 9.927838 9.444536 10.864925 2.143622 7.447392 10.716549 10.6561054 6.3034830 8.9404625 8.9693658 7.7453826 9.6741255 5.4473941 8.5582971 11.1335385 8.2429597 0.4655044 6.8336099 6.3731993 10.6902652 9.1770348 8.4576284 10.4281468 7.5614644 4.6982018 11.2053543 7.5337806 10.9428935 10.3343625 10.7697771 8.5792820 10.2615795 6.7435244 1.3135361 9.2971891 6.0262556 11.3545875 5.5530041 10.4995135 8.8876048 7.3603573 13.8061411 10.6004796 10.0985351 12.3131454 10.8612882 9.0542546 -0.2714264 TCGA-C8-A12Z 45 0 NA 382 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 2 asian not hispanic or latino 6 3 1 NA 1 6 2 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 1.213791e-06 3.121176e-07 9.50333462 10.48464277 11.63563061 10.07191387 7.85850077 10.02910484 10.32955587 9.81506142 10.99127268 13.52287265 10.43631355 10.62376574 2.14577526 18.36629954 4.73074320 8.97585771 5.12560564 8.25430728 8.51888955 13.13051757 2.43528188 12.87152760 8.05800688 8.87494263 11.19532871 6.97585714 1.97585026 7.78642908 10.31180620 -1.02414974 8.37460134 9.42397392 NA 4.40212184 9.98778372 10.78321255 9.11796459 11.53308201 10.42345747 11.17767529 12.82653286 9.82448052 15.07327258 6.76304235 9.72655622 10.66367070 11.18744184 4.80874542 3.29779303 8.86307831 12.42113121 -0.02414974 11.51550116 3.29779303 3.49942497 4.70377625 10.63272935 11.89899942 10.17736896 11.60202296 12.86792607 7.56831490 10.53092606 9.13320465 11.31848796 10.86155400 5.16568286 12.43054251 9.43118479 -1.02414974 10.10642815 9.54571320 1.97947664 4.06332173 11.15109533 10.36871172 9.40944313 10.03992674 NA 9.94811956 12.84795534 11.00583497 10.31347953 8.33999248 -0.6605900 1.6328000 1.3193000 0.2259200 0.0102850 -0.0121620 0.0781500 0.0084743 0.0084743 -0.7126500 -0.7126500 2.6861000 0.0549450 0.0319170 0.0216030 0.0216030 0.0366530 -0.0226060 1.3226000 0.0690950 0.0098669 0.0509610 -0.6432100 3.6569000 0.5438300 2.0682000 -0.5784400 -0.5693200 0.0642250 -0.5995400 -0.6605900 0.0235660 -0.0151870 -0.6834200 0.3792400 -0.0357650 -0.0357650 0.0084743 0.0084743 0.0084743 0.0144700 -0.6490300 -0.7126500 -0.0078863 -0.7104200 0.0126550 0.1389500 0.0319170 0.0393370 0.0216030 0.0216030 0.0185230 0.0185230 -0.0226060 -0.6497000 -0.4187100 -0.0028677 0.0098669 0.0509610 -0.6666100 -0.6432100 -0.6175800 -0.6598400 -0.5290000 -0.5693200 0.0642250 0.7192300 0.1311000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 7.55328677 13.09560937 4.18531156 9.86536165 2.97585026 11.73616179 0.97585026 NA 8.62511375 7.39792273 -0.02414974 7.75268571 3.43529522 10.78602755 8.96596173 1.78320518 6.18531156 9.62690943 10.30789421 9.32790109 8.57881609 6.97585714 10.15825206 0.40882053 7.34654476 9.49155751 1.29777836 NA 11.17981736 2.43528188 13.23036963 11.80518397 7.44753291 10.28760596 6.86460094 8.43733720 6.92422462 -1.02414974 NA 4.95313950 7.42706892 8.70887282 10.80359734 2.29777836 9.26220739 6.98708548 9.37246244 6.58318810 8.39581772 NA 10.29665815 1.97585026 2.97585026 9.71758578 7.48922982 4.18531156 9.22259834 6.04194602 6.63406901 1.78320518 14.99286176 -1.02414974 9.64474263 0.56081276 9.01751693 2.97585026 8.02298138 8.51307616 11.763899 6.020251 9.120516 18.366300 10.601055 11.370588 13.130518 9.763760 9.642969 11.042620 13.818012 10.519856 8.863078 9.383125 1.297778 7.978673 11.655118 11.5321242 5.7037790 8.6500501 8.7307452 8.4515911 10.7783458 4.0633217 7.3334094 10.4363135 5.5457120 1.9758503 8.4616869 6.7398670 12.0104847 10.3627978 8.2118718 8.8721901 10.8763471 4.6197123 9.8751314 9.1179646 10.3140369 10.2397137 11.3849834 10.3449097 11.2049769 10.0236632 0.9758503 9.5598524 4.6762956 11.5155012 7.4475329 10.5845745 10.6327293 7.4393821 13.5764094 9.8174220 10.6836481 13.5491498 9.9278708 9.5457132 0.9758503 TCGA-C8-A130 52 0 NA 96 breast stage iiia t3 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 4 NA 1 5 1 2 4 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.935946e-07 4.508365e-07 9.6376834 8.9553439 11.6709753 7.9728845 8.9082587 8.8055449 9.7889304 9.5607497 10.5891057 12.7233258 9.7289016 10.4171799 1.1871343 13.0757125 2.0616380 9.7366233 6.5150864 8.0575245 10.6338982 12.5251530 -0.3978282 12.4518953 7.9902140 10.2288187 11.2937225 6.4414005 0.6021718 8.4366208 10.8441802 4.4350885 7.5240378 7.0779309 NA 5.5563926 9.3267108 10.3339403 9.8073794 9.6141231 13.7680462 10.7090871 5.8501243 11.7295466 14.4806791 6.5074633 9.5388349 10.9867110 10.6335536 3.3570875 4.5794759 8.6816819 9.9875203 0.6021718 10.9880594 5.1099915 5.6465918 4.4601790 9.7061404 11.9389825 9.6369959 11.6860088 12.3009017 8.3267108 10.6127251 9.9337467 11.2379152 10.6655921 3.8876033 12.5306229 11.1913800 1.9241379 10.6144724 10.0895347 4.9948557 4.6021956 9.0492803 9.6183090 10.0316038 10.6311391 3.8116457 7.1139494 12.3870363 11.1855149 10.3190166 9.8554536 0.00055459 0.35452000 0.39479000 3.52030000 0.39347000 -0.01177600 0.38337000 0.35904000 3.65690000 -0.45136000 -0.49364000 3.65690000 0.28248000 0.45604000 -0.01464100 1.56380000 -0.03044400 1.83170000 1.24290000 -0.04455100 0.37627000 0.34291000 -0.46366000 0.67734000 0.67734000 0.85838000 0.25215000 0.91703000 0.36756000 -0.00069303 0.00055459 -0.29532000 -0.46241000 0.38006000 -0.00193990 -0.45168000 -0.45168000 0.35904000 -0.43170000 0.18268000 0.03031000 0.29326000 -0.04170200 -0.54705000 -0.41487000 -0.41487000 -0.47194000 0.45604000 0.54418000 -0.88843000 0.63007000 -0.08797700 -0.86113000 0.34925000 -0.45800000 -0.08939100 -0.06678800 0.31900000 -0.81802000 -0.08956700 -0.11077000 0.67734000 -0.41157000 -0.55457000 0.25215000 -0.49944000 -0.84171000 -0.07921000 0.282 0.456 0.000 0.000 0.349 0.349 -0.430 0.319 0.000 -0.134 -0.432 0.153 0.264 0.000 0.000 0.224 0.224 0.000 0.394 0.368 0.368 0.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 -0.068 0.345 0.345 0.000 0.000 0.669 1.079 -0.415 -0.415 0.279 0.000 0.282 0.456 0.000 0.000 0.349 0.349 -0.430 0.319 0.000 -0.134 -0.432 0.153 0.264 0.000 0.000 0.224 0.224 0.000 0.394 0.368 0.368 0.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 -0.068 0.345 0.345 0.000 0.000 0.669 1.079 -0.415 -0.415 0.279 0.000 8.7198402 13.3762634 5.3436636 9.3736865 1.7721390 11.0839965 1.4095267 NA 8.5908815 8.2639752 1.1871343 8.3226979 7.4319196 11.7897038 10.0131783 6.0368242 6.7366238 9.2514533 9.1833977 10.9766932 9.3509686 7.7696151 12.1350399 1.1871343 8.5180764 10.1178968 7.2886972 NA 10.9317131 3.5563926 12.7519442 13.0076709 8.2424420 9.5915915 9.0242618 10.4671570 6.2315534 3.6021956 0.6021718 0.9240999 10.1075124 9.9514782 9.5366251 4.2746195 9.7695964 8.0595781 10.2732958 6.0779309 9.3309680 0.6021718 10.9311524 0.9240999 5.3164427 9.6883996 7.0461767 5.0616293 8.9059778 7.7366231 6.7211375 2.7721179 12.7816397 1.9241379 10.2406330 NA 7.8689836 6.0030760 8.1606177 7.7468556 12.227781 7.702859 8.997731 13.075713 9.515086 10.609575 12.525153 11.869423 8.908566 11.218746 12.532010 11.001742 8.681682 10.132603 3.460179 8.307829 10.474102 10.3436640 5.8406017 8.9275024 8.8841272 10.0497968 9.7914595 6.3026371 5.6465918 9.7289016 5.9772364 0.6021718 7.1020429 8.2737914 10.3309678 9.3819164 8.3769840 8.1040341 8.9772364 5.8116508 11.5696503 9.8073794 10.3982366 11.0495386 10.6949542 9.7633289 9.6709754 7.9442716 2.3026408 9.3819329 6.0860131 10.9880594 6.6190050 10.8419954 9.7061404 7.3232962 13.6649600 10.5912367 9.4327123 12.4018834 10.7455802 9.3394443 2.1871660 TCGA-C8-A131 82 0 NA 411 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 4 asian not hispanic or latino 4 3 4 NA 2 3 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 4.161568e-07 10.11033949 8.59406068 10.90806171 7.67951388 8.08946266 9.35100944 8.72452374 10.56731385 11.70073508 13.64188051 9.82438759 10.59406049 3.40423556 12.02128594 2.94480224 11.42609924 4.87553927 8.50704694 4.30235561 11.84585977 -1.05529145 10.34994585 2.64524051 9.54057463 11.34140913 7.13956158 3.19273074 10.13090617 10.95917359 2.64524051 8.18320908 7.76817175 -1.05529145 4.77769324 8.16155014 10.60524596 9.13462885 9.32958805 9.10593626 10.29684774 10.54378730 8.77927548 15.08705104 6.30402726 9.73025682 10.67951397 10.22557511 2.85169908 5.05332859 8.33926702 11.52576949 -0.05514155 10.80666666 3.98920260 5.85169408 4.85169408 10.76218776 11.69404528 9.84037967 11.45976490 12.43477770 8.52976669 11.13432010 10.03046934 11.04119006 10.07730403 3.26672658 11.51987082 10.55305921 4.15425915 10.17722530 8.91778409 3.53636379 3.40423556 11.58459723 9.80821626 9.11848146 10.00617556 NA 10.49651258 13.11785681 11.42811632 9.93206841 10.17181855 2.868200 0.487510 0.474700 -0.028218 -0.018490 0.052952 1.652300 0.043440 -0.122870 -0.473110 -0.473110 1.256900 0.612440 -0.027398 -0.024251 0.523980 -0.028628 -0.223420 -0.227240 0.164900 -0.023018 -0.028845 -0.214410 -0.214410 -0.214410 0.010564 0.010564 0.010564 0.202280 -0.023292 -0.202740 0.183890 -0.028218 0.052952 0.052952 -0.456080 -0.456080 0.043440 -0.122870 0.072396 0.394960 -0.032178 -0.473110 -0.162050 -0.162050 -0.169770 -0.158990 -0.027398 -0.027398 -0.024251 -0.024251 -0.028628 -0.028628 -0.223420 -0.227240 -0.227240 0.164900 -0.023018 -0.028620 0.199840 -0.214410 -0.214410 -0.062118 0.010564 0.010564 0.202280 0.390150 0.000000 0.612 0.000 0.000 0.000 -0.227 -0.227 0.165 0.000 0.000 0.210 0.210 -0.214 -0.214 0.000 0.000 0.000 0.000 -0.203 0.272 0.202 0.202 0.203 0.000 0.157 0.157 0.000 0.000 0.000 0.000 0.000 -0.456 0.000 0.000 0.395 0.000 -0.473 0.745 -0.170 -0.170 0.000 0.000 0.612 0.000 0.000 0.000 -0.227 -0.227 0.165 0.000 0.000 0.210 0.210 -0.214 -0.214 0.000 0.000 0.000 0.000 -0.203 0.272 0.202 0.202 0.203 0.000 0.157 0.157 0.000 0.000 0.000 0.000 0.000 -0.456 0.000 0.000 0.395 0.000 -0.473 0.745 -0.170 -0.170 0.000 0.000 7.75215917 13.83933793 3.80278258 9.01223874 1.38840999 12.50919204 0.94478350 3.80278258 8.66590364 9.59764923 NA 8.21498300 8.88291353 11.00550027 9.18916828 3.69969598 6.45259873 9.23597495 9.65647134 10.69760313 9.04865606 6.39601560 11.66376524 -1.05529145 8.51276061 10.30125634 1.52977098 NA 11.25342779 3.11473348 13.45791506 13.14731083 8.11472932 9.60122926 7.51845173 10.00819945 5.01089171 3.46836175 0.94478350 -0.05514155 9.38567348 11.00313438 7.65561086 4.15425915 9.85183772 8.18081870 9.81362697 6.77769455 8.91058877 -1.05529145 10.54703920 3.03225957 3.64524051 9.58902113 7.84645571 5.38774853 9.25200519 7.83354730 7.07408686 5.75215983 13.53667728 1.26675656 10.50370332 2.52977098 10.18440292 4.26673408 8.07408739 9.52223312 12.531264 7.440659 8.842650 12.021286 9.946213 10.837727 11.845860 8.917784 9.150598 9.764185 13.202192 9.902632 8.339267 9.470325 7.790294 7.178424 11.633055 10.961613 6.220930 11.273188 8.624284 8.662481 10.058234 6.588661 5.053329 9.824388 9.841893 NA 10.083076 7.832055 12.913111 9.934908 8.275721 9.476186 7.311126 5.617231 10.259291 9.134629 10.102151 10.040861 10.640902 9.638291 10.221510 7.933489 8.724524 9.999544 6.248584 10.806667 7.659050 10.420031 10.762188 7.445288 13.597257 10.005500 10.148764 12.153191 12.440035 9.267859 -1.055291 TCGA-C8-A132 56 0 NA 57 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 2 2 1 NA 1 6 2 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 9.7401390 10.4063569 11.9955544 10.0590678 7.9735619 9.4392252 10.4186178 10.3604870 9.8371104 14.4979424 10.7466375 11.1378121 4.2417563 17.1743115 3.7563295 10.1676604 3.9489746 8.5884977 8.6100415 13.0867997 -0.3729535 12.9675239 4.8364998 9.0611965 11.1801972 6.9977350 -0.3729535 11.6340752 10.4709689 1.7969715 7.6877438 8.2545818 0.2120090 5.4344014 10.3592153 10.3621808 8.5429274 12.0208406 10.4768439 11.3447243 5.6043264 11.4528017 14.9106427 8.7265271 9.6639083 10.4858060 11.9306860 6.2195054 3.8749740 9.3387148 11.5976931 0.2120090 10.9604828 5.5339371 7.2343787 4.5339371 10.7306636 11.9070936 10.6469861 12.4824031 12.9060055 7.5841500 10.7078655 10.2130760 11.0398823 11.1978523 4.9124487 12.5683707 10.9920033 0.9489746 10.5895824 9.4623088 4.7157836 5.5812428 10.5537145 10.5335628 9.7459890 9.8019736 3.1506084 9.0946533 13.3935251 11.7894392 10.5399372 9.6542628 -0.0053992 -0.0053992 -0.0053992 0.0317180 0.0850760 -0.0384420 0.0857990 0.1280000 0.0982170 0.1244700 0.1244700 0.1244700 -0.2073400 0.3772600 1.2673000 0.1472600 -0.3445800 0.0513870 0.0513870 -0.0194520 0.2728500 0.1137400 0.1852500 3.6569000 -0.3383700 -0.1208200 -0.1208200 -0.1208200 0.5686300 -0.0053992 -0.0053992 -0.0878440 0.0395050 -0.0384420 -0.1338000 0.0857990 0.0857990 0.1280000 0.0982170 0.1118400 0.0151680 0.0151680 -0.5876800 -0.1722100 -0.2590200 0.1106500 0.1206400 -0.2831100 -0.2831100 -0.3283200 0.1472600 -0.3489300 -0.3489300 0.0513870 -0.0650950 -0.1001300 -0.0085766 -0.3442300 0.1137400 0.1213800 -0.6322500 -0.3316800 -0.0069195 -0.3529300 -0.1208200 0.6030400 0.1331700 -0.3433100 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 0.000 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 0.000 10.2054206 14.1539750 6.6768964 10.4299681 6.4007138 11.7164984 4.5812428 2.5339371 8.3651400 8.7869191 0.9489746 8.6730532 2.0864781 10.2339157 8.9054974 2.8749740 10.2049488 9.1555021 9.1417620 9.3944048 9.9658902 7.8193406 11.2366884 3.2120090 7.7994753 9.9302579 6.0364396 1.7969715 12.2069530 2.3274862 12.2657101 12.1334795 8.5680956 10.1123741 8.7342649 9.2645784 5.4850275 3.5812428 -1.3729535 6.3685152 8.1835540 9.0554080 9.7850264 4.4850275 9.9968361 6.1662073 10.1931020 6.8019734 9.0427896 0.6270465 10.6840242 3.5812428 3.9845985 9.5557439 7.6867435 7.5899440 9.3161722 8.3952321 9.0997386 2.3274862 13.7666792 1.2120090 11.0239202 NA 8.5899440 5.2417563 8.6958261 9.2091899 12.845899 5.903173 8.753752 17.174311 10.460333 10.488135 13.086800 12.503565 8.691400 11.265710 13.206305 9.976329 9.338715 8.816873 0.212009 7.154524 12.210013 11.618215 6.776795 9.303886 8.957965 8.225100 11.460652 7.984600 9.325752 10.746638 7.006426 2.327486 7.930828 8.294071 12.131743 10.694146 8.458355 8.368515 11.369147 7.914760 11.605694 8.542927 10.247726 10.120403 11.406972 10.654263 11.053575 9.186425 3.086478 9.398603 8.627048 10.960483 7.872600 11.503642 10.730664 7.469398 13.776119 10.317046 10.058023 12.412092 10.605401 9.951228 2.627046 TCGA-C8-A133 65 0 NA 0 breast stage iiia t3 n1 m0 female 2010 NA NA other specify NA white not hispanic or latino 3 5 2 NA 1 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 9.4970952 9.4137525 11.1364729 8.6193950 8.2468551 8.6226262 10.7831969 9.2405598 10.7624750 12.8598120 11.1251265 10.4637032 NA 12.3758391 2.1404188 9.2922008 8.2278859 7.6702441 7.7373582 13.3668956 1.9884120 14.6778357 1.1404515 9.8409392 10.4975352 8.9257123 -1.1814766 10.6498023 12.9756051 NA 6.4979748 5.0083210 0.8185234 1.9884120 9.1989562 9.9909225 11.7701441 8.6639850 9.0181673 10.3532842 -1.1814766 10.9532422 14.7755971 7.0350465 10.6632009 11.0406862 10.2588452 1.9884120 5.0852802 8.4496720 10.9052948 -0.1814766 10.7121758 2.4034586 3.4623534 3.5733866 10.2326518 11.3467050 10.8283237 10.0747037 12.1121104 8.2840616 10.6612382 10.4753668 10.1782447 9.8919673 3.5733866 11.5947225 11.9051289 NA 10.5262856 8.5750513 0.8470348 4.1039004 10.3508510 9.5067453 10.7388480 8.9217829 0.8185234 9.6576989 10.8680033 10.6426583 10.0963636 9.1505318 -0.00553750 -0.00553750 -0.00013862 0.00000000 0.00000000 -0.00180140 0.00000000 0.00291330 -0.00290910 0.00139140 0.00139140 0.01251600 0.88966000 -0.00541960 0.00027728 0.00027728 0.00027728 0.00903120 0.00610900 0.00110930 -0.00443120 0.00055459 -0.00277070 -0.00277070 -0.00277070 0.00013863 0.00013863 0.00013863 0.00194180 -0.00069303 -0.00553750 0.00013863 0.00000000 -0.00180140 -0.00180140 -0.00433090 -0.00433090 0.00291330 -0.00290910 -0.00290910 0.00022533 0.00499690 0.00139140 -0.00568900 -0.00568900 -0.00415460 -0.00415460 -0.00541960 0.00097064 0.00027728 0.00027728 0.00027728 0.00027728 0.00610900 0.00610900 0.00610900 0.00110930 -0.00443120 0.00055459 -0.00193990 -0.00277070 -0.00277070 -0.00027724 0.00013863 0.00013863 0.00194180 0.00180300 0.00763920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.9374362 9.0449072 7.3341946 7.5154625 2.8185029 10.9871672 NA NA 8.5241276 7.3921422 NA 4.5733806 NA 10.6698537 8.6934765 NA 2.4034586 8.8283238 12.8152334 12.0458102 9.8804872 6.7433076 9.6965460 2.6258549 10.7889605 9.3788278 3.9477784 NA 10.4118862 1.4034313 13.6506928 12.7889605 6.0473137 10.8839112 9.3769159 9.4322844 NA 0.8185234 NA 7.8128486 10.0046093 11.3471934 9.5223987 1.1404515 6.9217826 7.0328139 10.4391732 2.9059670 8.7133130 NA 11.0491160 -1.1814766 9.8697039 9.9092295 7.6023121 NA 8.4926872 6.5464161 13.1405640 NA 13.9852466 NA 11.5553198 NA 8.3063352 3.9884211 7.6919389 10.3178428 13.9274254 5.1760475 9.0340280 12.3758391 10.3435020 11.1619584 13.3668956 12.2922008 8.9125726 9.9777357 12.3515814 11.6588796 8.4496720 8.3361646 0.8185234 7.2405595 9.3262897 10.894643 6.511982 8.945199 8.728388 7.911252 9.614015 5.326289 8.887273 11.125126 7.887274 -1.181477 2.725392 6.181755 9.440547 9.466853 9.464153 10.092291 10.142676 1.988412 8.830058 11.770144 10.323810 9.927673 11.122561 7.349877 10.097525 8.728388 NA 10.057443 2.518938 10.712176 1.140451 10.971730 10.232652 6.342057 14.148677 11.155559 10.460998 13.008397 9.123417 9.338131 NA TCGA-C8-A134 52 0 NA 383 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.254182e-06 6.589149e-07 9.5923051 9.3483794 11.0573748 8.6979757 8.7499964 9.6504862 7.7620099 10.3410961 11.6993546 14.1223059 9.9485725 10.3299830 1.9305103 11.4700089 1.4610570 9.2822023 5.1004521 8.4549597 9.5411417 4.9204743 -0.6544901 10.2282075 9.5146543 9.4369998 11.0864695 6.3151912 1.4610570 9.5399110 11.5300266 1.5679348 8.6193602 7.1678697 -2.2392255 4.8374185 9.6474417 9.3436847 9.3465033 10.5621083 9.4829826 11.6337576 4.6060928 7.1269243 15.6973262 8.0075684 8.7507060 10.6835579 10.6552303 4.2841662 -2.2392255 8.7836632 11.6176110 -2.2392255 8.4662343 4.6060928 6.4188140 5.9103489 8.7995209 11.9509668 9.9151036 9.5558300 12.7951001 9.3351954 12.1533889 11.0083233 11.8516240 10.7166150 4.2200358 12.0542173 8.7075082 0.5679348 10.5821766 10.1148514 3.5646099 4.5419608 11.0501886 10.7519467 10.4501632 10.4358974 0.5679348 7.6719939 12.6499633 11.9858094 10.2459282 8.6271081 -0.5609700 0.0345360 -0.0318500 0.0765660 0.0793030 -0.0090611 0.0788710 0.0781500 -0.5740700 0.0454240 0.0454240 1.0855000 -0.5383300 0.0619370 0.0242680 -0.5183500 0.0109820 0.0356650 0.0180050 0.6014200 -0.5319500 0.0409570 -0.5095000 -0.5095000 0.0679480 0.0496820 0.0496820 0.0502500 0.6229700 -0.5051500 0.0345360 -0.5588700 -0.5444100 0.0511030 -0.5830400 0.0332670 -0.5687200 0.6684500 -0.0165670 -0.5375400 -0.0098185 0.6162500 -0.5629600 0.0322810 0.0322810 0.0322810 -0.5165100 -0.8269200 -0.3876100 0.0676610 0.0438650 0.0358060 -0.5509300 -0.5175300 0.0432990 0.0784380 0.0164250 -0.5094000 -0.5317000 0.6627200 -0.5095000 0.0679480 -0.5413800 0.0496820 0.0502500 -0.5408800 -0.0247980 0.0400440 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 0.000 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 0.000 8.5129826 12.5123029 0.3455099 9.4361181 4.3965020 11.2141298 2.8898823 0.3455099 9.7860876 7.5188254 2.4044672 9.7246143 2.2841587 10.8982335 9.5258880 6.4817010 8.3651553 8.8645455 7.0643828 9.0303132 9.2008118 7.3734707 12.0665212 2.4044672 8.6935549 10.1372700 3.3455667 NA 10.6688069 1.7606042 12.5812297 12.2700059 8.1593456 9.2317691 10.1170540 9.7016495 4.3605118 3.8266908 -0.6544901 4.2524535 8.3899587 9.0689411 6.2282069 3.9504311 10.0526964 7.5711739 9.6697450 4.9305292 10.0165157 2.1529297 13.0178056 2.4044672 5.6854132 10.7524143 6.6118820 5.4471031 9.0500445 8.4152381 6.5966519 5.2282069 12.9542813 1.4610570 11.1200770 -1.2395661 10.6178055 4.9305292 8.2978205 7.8573173 9.771480 9.302183 8.790579 11.470009 10.708571 10.859950 4.920474 10.666741 9.247437 10.348848 12.560339 10.745732 8.783663 8.059810 NA 8.009716 11.265917 10.287346 5.228207 8.216956 9.653904 5.481703 9.363301 6.720604 6.315191 9.948573 10.492769 2.082532 6.708969 10.289713 12.808578 11.145925 7.493617 9.548912 9.350253 6.360515 10.606874 9.346503 9.934903 9.898234 10.783143 9.996018 10.234308 9.391779 NA 9.825237 6.802262 8.466234 6.912887 10.141875 8.799521 7.966688 13.659817 10.008233 10.874995 13.164313 11.611668 9.171583 1.220020 TCGA-C8-A135 64 0 NA 393 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 6 3 4 NA 2 6 2 6 4 2 2 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 9.3980048 9.8335897 11.6048990 8.6832048 10.0887089 9.3509290 10.0534817 9.8724089 10.7584382 13.8667234 9.9074446 10.8354101 0.4672795 16.5560902 3.2042346 9.9684412 5.5965506 8.9999482 8.3169331 12.8682358 NA 11.2266009 3.4058699 9.0175782 11.9292584 7.7309279 1.4672795 9.3324233 10.6595603 -1.1177874 10.1624957 7.0218561 NA 5.6636634 9.6480054 10.7375628 9.6136239 10.0776772 10.0528560 10.7211149 -1.1177874 9.7518988 15.2244491 6.8506257 9.9396198 10.7024839 10.5918196 4.2746195 1.2042033 9.0345899 12.1044961 -1.1177874 11.3638522 4.3085720 6.1014736 4.8364998 9.5216456 12.0789071 9.7816618 12.1728998 12.5155273 6.3417367 10.5542882 9.8233526 11.1700174 10.9301105 4.2398563 11.3570249 9.5991244 5.2221554 10.1443998 10.2486272 3.2787431 5.7771225 9.1171223 9.4330517 11.1977376 9.9631225 1.4672795 9.1803674 14.3334195 12.6215582 9.9986490 9.9143507 -0.1437900 0.2303500 0.2303500 -0.2482500 -0.2482500 0.0610790 0.3868400 0.0462750 -0.3278500 -0.3471000 -0.3471000 0.7802200 0.0502500 0.0502500 -0.3271600 -0.1469500 -0.1469500 0.0878240 0.0878240 -0.3036900 0.0526680 -0.3389400 0.3268900 3.6569000 0.6017800 -0.3567000 0.0283410 0.0283410 -0.0321780 -0.1437900 -0.1437900 0.0329860 -0.2482500 -0.3745000 0.0610790 -0.1351000 -0.1351000 0.0462750 -0.3278500 0.0465590 0.0461330 -0.3655600 -0.3471000 -0.0081624 0.0000000 0.0000000 0.0000000 0.0502500 0.0368940 -0.3457000 1.5235000 -0.1469500 -0.1469500 0.0878240 -0.3454900 -0.3454900 -0.3280900 0.0526680 -0.3389400 -0.1456700 -0.3469800 -0.3513300 -0.3300600 -0.3567000 0.0283410 -0.1787900 0.4231800 0.0481200 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 -0.238 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 -0.238 8.9046729 13.4959793 9.4426377 9.5494166 2.4121312 11.6765177 0.4672795 2.0522420 9.3831468 7.7340538 -1.1177874 8.1225718 3.7402908 10.8801901 8.8071176 0.4672795 8.3801567 9.3273198 10.5333566 13.2375184 9.3051897 7.7183555 11.3140637 3.6896570 6.5043566 10.2160194 4.2398563 NA 11.1903595 1.6896570 13.3997898 12.8698355 8.2176955 9.4775624 8.5025247 10.1044961 5.1860845 2.5827487 NA -0.1176308 8.1769256 10.9561118 8.9348729 5.0115896 8.3006848 8.0167314 9.3148469 6.2042327 10.6554441 NA 10.8592270 5.0115896 3.8364998 9.9599352 5.6358559 6.3499101 9.1385137 8.7936969 8.0622140 1.8822909 14.7913777 2.3417296 10.4602058 NA 9.4048865 5.8011690 8.2266010 7.7557489 10.530213 7.111123 8.777123 16.556090 9.545863 11.052230 12.868236 9.960456 9.258430 10.826285 13.432330 12.159302 9.034590 8.493330 NA 8.655444 10.852051 11.6168029 5.0320523 8.9684413 8.2916961 8.1769256 10.9252912 7.1723235 6.3741579 9.9074446 7.5896639 0.4672795 7.9750621 7.3194328 13.5029830 10.6844174 9.1642349 8.8233526 9.5731761 6.5965506 12.8826105 9.6136239 11.0106215 12.1543515 10.8826571 10.2681673 10.5520759 9.0205766 4.5261627 9.5569034 7.1302328 11.3638522 6.7771225 10.7379521 9.5216456 7.5369411 14.1399506 10.5498600 10.3605689 11.9847728 10.8674354 9.2735485 2.0522420 TCGA-C8-A137 34 0 NA 125 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 1 NA 1 6 2 2 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.109751e-06 3.121176e-07 8.77171560 9.93010291 11.54665475 9.06853432 8.77171560 9.69337213 10.40833144 9.28049241 10.97988923 13.48276888 10.41002177 10.40041689 NA 16.94695062 3.47928231 7.97266336 6.10933548 8.69429729 5.23671455 12.44781408 1.89433274 12.62126989 6.69429798 8.88948328 11.86771179 6.93245690 NA 8.92459490 10.45110167 NA 7.40889524 7.09819425 NA 1.08698752 9.58880419 9.70993401 9.11625428 11.41872372 9.61542108 10.68501952 0.67192738 9.01177962 14.78781307 6.44319885 10.32298122 10.71221926 12.36962109 2.78741157 2.54638827 8.72901873 10.81913439 NA 11.42263647 4.94494744 2.99385548 4.54640062 10.45492775 11.85473766 10.72495026 11.15002496 12.67157724 6.93871628 11.09399426 9.87486949 10.72992123 11.00060442 4.91985490 11.94824782 8.81658787 NA 10.01548544 9.88381782 2.54638827 3.73082470 10.88988721 10.24998770 10.80806619 10.03825166 0.08691961 10.01548544 12.49064481 12.19614469 9.60168110 8.70351569 0.00624810 0.00624810 0.01572700 1.49670000 -0.00926660 0.00652620 0.06222300 -0.00055444 3.65690000 -0.00166290 -0.00166290 1.47810000 -0.05239600 -0.02178400 0.00986690 0.09289500 0.09289500 0.00791750 -0.00227240 0.03129500 -0.71372000 0.04925600 -0.73064000 3.65690000 -0.70505000 -0.01862800 -0.01862800 -0.00995650 0.06479700 -0.00512270 0.00624810 -0.74586000 -0.72747000 0.00652620 0.00513590 0.00000000 -0.01711600 0.02146300 -0.73249000 -0.74577000 -0.77414000 -0.00027724 -0.00505320 -0.71631000 -0.71631000 0.01265500 0.66272000 -0.02192100 0.65627000 0.00986690 0.09289500 -0.72906000 -0.72906000 -0.00227240 -0.00227240 -0.00227240 0.01684500 0.00903120 0.03228100 -0.71087000 -0.73064000 -0.72958000 -0.00732840 -0.01862800 -0.00995650 0.07009900 -0.64499000 0.00097064 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 0.000 6.9998569 12.9347095 6.8748695 8.6530210 1.0869875 11.9565609 NA NA 9.4201223 7.1368158 NA 8.3095205 3.5464006 12.1127987 9.0309468 NA 6.8351598 9.5627003 12.2927602 11.1869722 9.4476494 6.7308233 10.1915657 NA 5.4268182 9.5005949 NA NA 12.1330679 -0.9129446 12.0920652 12.2176984 7.2718421 9.9680810 8.0177043 9.8191344 3.3348972 NA NA 3.4792823 8.7344255 9.4717508 10.5195089 3.1744224 8.1988070 7.6026669 9.8526675 6.5627003 10.3861751 NA 9.7778380 2.6719274 2.8943133 9.7131323 6.2501639 3.4088885 8.0699604 6.2668765 10.0649623 0.6719274 14.1519202 1.0869875 10.1677845 NA 9.8148875 3.6105347 8.2890907 8.3514097 11.720114 8.163782 9.426817 16.946951 10.083716 11.025076 12.447814 9.029482 10.063531 10.616398 12.528614 9.804643 8.729019 8.236714 1.894333 6.759393 10.782195 11.370055 5.828434 9.136816 9.276792 8.136815 10.401193 4.841852 4.546401 10.410022 7.664396 2.993855 8.921438 6.737588 12.021026 9.637714 8.426817 8.806356 9.446717 3.944952 11.089722 9.116254 9.985568 9.985568 10.225879 8.995360 11.096096 8.919857 11.028748 8.478340 4.256890 11.422636 6.610529 10.976851 10.454928 7.562700 14.309120 11.008436 10.404945 11.675447 10.590296 9.782195 1.408875 TCGA-C8-A138 54 0 NA 124 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 1 NA 1 5 1 2 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 10.665098 9.285673 10.771948 7.604986 8.793820 9.953317 9.182316 10.297498 10.049460 14.406040 10.925010 10.415058 9.888337 13.680984 2.739373 9.136964 4.208861 8.686391 9.775334 12.889315 2.900896 13.333410 2.038928 10.490020 10.823567 8.971147 3.896911 10.846988 10.998934 NA 7.966710 7.016212 NA 5.546728 8.768553 10.386000 9.529783 9.492203 9.707817 10.510608 12.281213 10.485499 14.465066 7.756883 9.845482 10.649957 10.134989 4.038937 3.038928 8.581964 10.253859 1.360870 11.199119 6.623895 7.228757 4.711357 10.580997 12.101316 10.605938 11.454146 12.987938 8.496313 10.479283 9.579060 10.722804 10.070289 3.286866 11.478763 9.188680 NA 10.382673 8.196279 6.826834 5.546728 9.495287 10.607838 8.957796 10.050160 3.739373 8.761740 12.683465 11.481098 9.563474 9.893801 0.0808890 0.3053700 0.3053700 0.0587950 0.0093098 -0.4604600 -0.1445100 0.1424700 0.0448570 -0.4612100 -0.4612100 0.8653300 -0.1556000 0.1077400 -0.1706600 1.2791000 -0.1682800 -0.0706700 0.1437000 0.0000000 0.4314200 -0.1582200 -0.4618500 2.0259000 0.1465200 -0.4465200 -0.4465200 0.0962340 1.5072000 -0.4590600 0.3053700 -0.4914100 0.0587950 -0.4604600 -0.4604600 -0.1445100 0.1644500 0.1424700 0.0229580 0.0448570 0.1625000 -0.1298200 -0.4612100 0.2067200 0.2039600 -0.1472100 -0.1472100 0.1077400 0.1077400 -0.5111500 -0.1706600 -0.1682800 -0.1682800 -0.0706700 0.1432300 0.1432300 -0.1518300 0.4417200 -0.1582200 -0.4643800 -0.1474700 -0.4417800 -0.4904700 -0.4397300 0.0962340 0.1465200 -0.1551500 -0.4538300 -0.156 -0.048 -0.171 -0.171 0.000 0.143 0.000 0.442 -0.158 0.072 -0.442 -0.039 0.109 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 0.000 -0.156 -0.048 -0.171 -0.171 0.000 0.143 0.000 0.442 -0.158 0.072 -0.442 -0.039 0.109 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 0.000 10.15397604 13.28893465 3.68278676 10.03328575 3.15080335 10.78586650 1.03892777 0.62386686 8.28210615 8.34499400 -0.96100202 7.91336038 1.62391367 10.78082065 8.94582304 4.46519742 8.19121717 9.65087924 6.76003195 10.93791159 8.60062137 7.14222043 11.70204569 1.62391367 8.21135978 9.63232348 3.43124853 NA 11.15884614 1.62391367 13.16014208 12.10401186 8.92157528 10.46414832 9.38655382 9.84225636 4.24838303 1.84627266 -0.96100202 12.97851159 8.06959960 10.39813282 11.21260952 5.39648491 8.75832117 8.15527616 9.89924347 5.88442209 9.34840882 -0.96100202 9.92691446 0.62386686 5.03893215 9.47647647 6.43056294 6.61636064 9.42371619 8.45467395 9.57323534 0.03899798 14.37770357 1.03892777 10.87458805 NA 7.79715568 5.62389612 8.45467395 10.30278844 12.4641575 4.5935211 8.0389322 13.6809841 10.8161877 10.4541460 12.8893146 9.3220207 8.9046656 10.0111943 13.0665792 7.6201333 8.5819643 9.8487005 0.6238669 7.5227479 11.4602083 10.585827 4.820291 9.261727 9.349545 7.418311 10.115808 7.865481 6.431250 10.925010 7.208858 3.623890 4.530782 7.818520 10.404161 10.756609 8.308059 9.385446 8.206351 7.616361 12.322171 9.529783 11.129706 9.916217 10.356910 9.775334 10.199434 7.589679 2.739373 8.889432 8.155276 11.199119 7.426950 10.456563 10.580997 7.248386 14.105947 10.170146 10.706931 11.596875 10.612106 9.320862 3.793823 TCGA-C8-A1HE NA 0 NA 375 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.467973e-07 10.2801743 10.0911218 11.7493228 10.1983155 8.6773831 9.3928510 10.5761943 9.3876667 9.6381434 13.2535460 10.6412930 10.5387462 2.0068366 13.4061941 4.5428957 8.4706418 7.5573350 8.1579461 10.0992497 13.7143191 1.9073137 14.7287132 6.7146645 9.7941382 11.0399008 8.1807720 -1.9002335 8.4173669 10.2582485 -0.3150915 7.3167006 6.4879718 -0.3150915 4.7438111 10.5978062 10.3971572 10.9125328 11.6520230 10.9259069 12.0248596 -0.8999643 12.0480478 14.4272439 8.9777141 9.9649142 12.0765185 11.6880834 4.9825966 4.8813122 8.9296771 12.6523833 -0.8999643 11.3728757 4.3667418 5.7072846 4.2497032 10.8280874 11.8486714 10.6352297 11.7296525 13.2678821 8.6381434 10.3136661 10.2571687 11.9032783 10.9795376 5.3667418 11.9289833 11.1283785 NA 10.1714168 9.5650105 3.0092397 5.6235157 10.7541428 10.6035317 10.1146723 10.0229104 2.0999684 10.0180722 13.4270157 11.3655694 10.4928084 8.9113291 0.01419000 0.57916000 0.07944700 0.07810900 0.07810900 0.00610900 0.11060000 -0.00572230 -0.00304750 0.00402430 0.00402430 0.00402430 -0.00651170 -0.00651170 0.00708260 0.00708260 0.00708260 0.00000000 0.00000000 0.00930980 0.00270310 0.01349200 -0.01230000 -0.01230000 -0.01230000 -0.00470790 -0.00470790 -0.00470790 0.01950300 -0.64180000 0.01419000 -0.00595220 0.07810900 0.00610900 -0.76372000 0.06122200 0.06122200 -0.00572230 -0.00572230 -0.00304750 -0.00180140 -0.00180140 0.00402430 -0.01876500 -0.01876500 -0.01876500 -0.01876500 -0.00651170 -0.00346270 0.00708260 0.00708260 -0.62360000 0.02988800 0.00000000 0.00000000 0.00000000 0.00041593 0.00270310 0.00535100 -0.79216000 -0.01230000 -0.01230000 -0.61239000 -0.00470790 -0.00470790 0.01950300 0.02020300 0.02230400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2773739 12.2617161 5.3383602 9.7374850 2.2698710 11.2282710 1.4218561 NA 8.2032423 6.9764713 NA 7.4146734 0.9072753 10.1757677 9.3922760 1.2698710 7.9672332 9.4353448 11.9075106 9.8907101 9.9285233 8.5366661 10.2305250 3.9073137 9.5619453 9.8038579 3.2698859 0.4219100 10.1660435 2.9073137 12.0392581 11.6619582 7.4173673 10.4080089 9.0978396 8.9360048 4.4398026 -0.3150915 1.2698710 5.2497032 8.6516627 8.9594891 10.7708319 3.5593817 8.4996275 6.6886685 10.5178069 6.1443483 9.6702845 NA 12.3775324 0.9072753 4.2292341 9.7807051 6.5043296 3.0999516 8.9563799 7.0306914 5.5837688 -0.3150915 13.5458099 -0.3150915 9.6588534 NA 8.0321692 5.0306936 8.0556040 9.4771649 12.78029851 5.22923797 8.33117538 13.40619411 10.74628807 10.35940345 13.71431914 12.60359380 9.45575133 11.14673737 13.31188067 7.86150569 8.92967710 8.71558386 0.09990111 7.77237990 11.34372343 10.8594265 8.2711310 9.2188954 8.9032784 9.0075961 10.3092371 6.5304063 7.2673729 10.6412930 6.0306914 5.1660445 5.5511653 6.3061875 10.0373281 10.2591950 7.6679106 7.6942792 13.2028733 4.2698785 11.2249319 10.9125328 10.3320755 10.2101114 11.4642258 8.8287252 11.0628504 8.8380466 -1.9002335 9.1790258 4.4749941 11.3728757 6.1278602 10.6415011 10.8280874 7.3167006 13.5947787 9.6980069 10.1744304 13.2465230 10.2931717 9.9379764 0.9072753 TCGA-C8-A1HF NA 0 NA 332 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 6 3 4 6 NA NA 2 2 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 9.2715975 9.4457530 11.4405208 7.5994755 9.9614931 9.0323530 10.4716329 10.9132058 9.8964444 12.3961387 11.4131290 10.4515783 0.5704629 17.4069759 2.3359977 8.4579898 6.5568754 9.2085382 7.6997473 12.5899856 NA 13.3246838 0.2485348 9.8609440 10.7338625 4.5883848 1.4184598 9.6805561 11.2604624 -1.7514652 8.1311794 7.5614193 -1.7514652 5.6494171 8.9394073 10.2867694 7.4408293 10.1606771 9.7813792 10.3169787 0.2485348 9.9240524 14.7547354 6.4517864 10.6049883 9.8991394 10.6154049 4.1792722 2.3359977 8.6589876 12.8806227 -0.7514652 11.4934947 5.1065158 7.6472800 5.1792722 8.9704899 12.4766034 10.1162011 11.0021709 12.1710278 6.5839267 11.2980445 10.3068663 10.4776555 10.7622638 3.5339371 11.9512501 10.7371296 -1.7514652 10.2207981 9.1814892 2.4903647 6.0167214 10.9424588 10.2754054 10.4558557 9.2922471 1.2485348 9.1403201 12.3440981 11.5639689 9.8339683 9.1954426 0.080889 0.080889 0.072089 -0.580090 0.351860 0.082188 -0.241370 0.088548 0.088548 0.057013 0.057013 0.080456 -0.016979 -0.016979 -0.242040 -0.242040 -0.242040 0.025390 0.025390 0.079303 -0.235690 -0.601490 -0.578810 3.656900 0.635180 -0.270710 -0.270710 -0.268290 0.022444 0.061222 0.080889 -0.572690 -0.588670 -0.614520 0.664780 -0.222810 -0.222810 0.088548 0.088548 0.088548 0.070181 -0.592630 0.057013 0.065370 0.065370 0.064654 0.064654 -0.016979 -0.016979 -0.242040 -0.242040 -0.242040 -0.242040 0.025390 0.000000 0.000000 -0.579600 -0.235690 -0.585100 -0.600790 -1.292900 -0.565050 0.068665 -0.270710 -0.270710 0.022444 -0.583820 0.036229 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 -0.139 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 -0.139 8.8815316 13.7322576 5.8334999 8.6235757 3.4067951 12.2890829 0.5704629 NA 9.3577141 8.7413908 NA 7.9530627 2.8334973 10.8623258 9.0034237 3.7720968 5.9489769 9.9979867 9.9798553 11.1657219 8.5422608 6.6494157 10.8646256 1.0558898 8.8012052 9.6462109 1.4184598 NA 11.0617162 3.3359977 13.3002550 12.4444467 8.4518845 10.0429522 10.8785758 9.6690229 2.1554254 1.7079665 -0.7514652 4.6914783 8.3880875 9.5540282 10.2826474 1.0558898 6.3987403 7.2929308 9.9925291 6.6060883 10.2009136 NA 8.5035650 1.9489746 3.4184598 9.6350723 5.5425150 7.3752410 8.7963946 8.4940891 10.0050926 -1.7514652 14.5913402 0.2485348 10.1501574 NA 9.7074554 4.3778179 8.6758491 8.0050928 10.826274 8.360976 8.676896 17.406976 10.435888 11.416111 12.589986 8.749378 9.227690 10.223668 12.823898 9.051053 8.658988 9.397013 2.248535 8.772098 10.303480 11.0770695 6.1494037 9.0940262 9.5665142 8.5983704 9.6475685 7.4334118 4.6235743 11.4131290 9.7443914 -0.1665027 8.3570606 8.4871800 11.9005970 10.3156345 8.3791067 10.0861642 6.9455035 7.9350365 10.9333265 7.4408293 10.4920078 10.4017717 10.3336768 9.0461977 10.4106129 7.8031250 10.5805728 9.4637052 8.5094560 11.4934947 8.2597635 10.8813043 8.9704899 7.4946828 14.7849353 11.0560924 10.8669218 11.8643958 11.2324206 9.0742900 3.9209602 TCGA-C8-A1HG NA 0 NA 345 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 5.548757e-07 10.5394204 9.5703565 10.9151960 7.4650456 9.3611205 7.5121581 9.3771151 10.3186853 9.0054269 13.1927402 10.4309736 10.4567910 -0.4479181 10.6495301 2.8740887 8.0520023 1.5521803 8.5828235 11.4932039 12.3174425 NA 13.1327683 0.5521803 10.2655429 12.1347688 6.3465722 -0.4479181 9.9008845 10.7893663 NA 8.1557826 6.0757187 NA 6.8375586 8.4163424 10.8616327 9.2085811 9.4530232 8.6685003 10.5387095 NA 9.5689647 13.7514453 7.5270297 9.6762776 10.6554441 10.6040450 2.8740887 4.8375598 8.5883301 10.6222773 NA 11.3178568 4.6814380 7.1371192 4.7220834 10.2698328 11.8314768 10.3392426 12.6595369 12.0141473 7.5063528 11.6087941 11.0559821 10.3842552 10.6587193 4.0757209 12.2294356 8.2491239 -0.4479181 10.6833703 10.9615473 1.5700743 4.8000819 10.6501884 9.8375586 10.2298760 11.8107224 4.0757209 7.1815131 11.2564923 11.1276956 9.5019830 8.6316413 0.0225850 0.1048200 -0.0467180 0.3525100 0.2959600 0.0335850 -0.1391700 1.7082000 0.3183500 2.4241000 1.1547000 2.4670000 -0.0406470 -0.0904250 -0.3819000 1.9362000 -0.3969400 0.0100060 0.6756700 -0.2528500 0.0076392 0.2653100 -0.3757200 0.3060100 0.3060100 -0.0279450 -0.0279450 -0.0279450 0.2794700 0.0225850 0.0225850 -0.2330000 -0.3055700 -0.0440210 0.0335850 -0.0902290 0.2477800 -0.7059600 -0.3895100 -0.4266900 0.0000000 0.0404680 -0.8019400 -0.3813400 -0.3813400 0.2888100 0.2888100 -0.0904250 -0.0765450 -0.3738100 -0.3594300 -0.3824600 -0.3824600 -0.7103300 -0.2978000 -0.3235600 -0.2393600 -0.6658700 -0.0319050 -0.3669100 -0.3757200 0.3060100 0.8516600 -0.0279450 -0.0279450 0.0200350 0.0813220 0.1772400 0.000 0.000 -0.397 -0.397 0.000 0.000 -0.253 0.000 0.000 -0.094 -0.367 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.691 -0.093 0.289 -0.075 0.262 0.000 0.000 -0.397 -0.397 0.000 0.000 -0.253 0.000 0.000 -0.094 -0.367 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.691 -0.093 0.289 -0.075 0.262 9.3818790 11.4209789 2.8740887 8.8212829 3.6387689 10.2986707 1.5521803 0.5521803 8.8421753 8.1408712 -0.4479181 6.8000845 NA 11.1009782 8.8375586 1.8740887 7.1887807 8.9206628 7.2103674 10.7202016 9.1095627 6.3335168 9.6128523 1.8740887 7.5179410 9.7506015 4.1371182 NA 10.7579496 2.3595212 13.0849993 12.6939442 7.6710973 9.7270820 10.5675714 9.9950999 4.3070423 2.8740887 NA 1.5521803 8.9444737 8.7044411 8.3367913 2.8740887 8.0871981 6.5745239 10.1548552 4.5063544 10.2560599 NA 11.2525961 1.8740887 2.1371100 9.8265695 5.3408435 8.5379984 8.7419809 8.2103679 9.9878266 -0.4479181 13.4395674 -0.4479181 10.8576481 NA 8.4946708 4.4590447 8.9401735 7.2245815 14.037290 4.978420 9.179690 10.649530 9.295308 10.654788 12.317442 13.140403 8.596551 10.115353 12.325296 11.427906 8.588330 8.359511 1.552180 7.828281 10.309546 10.818357 5.874084 8.909708 8.839869 9.450002 10.084054 6.540841 8.950900 10.430974 7.203208 NA 5.333517 8.133545 8.942325 10.297831 8.652819 8.413243 9.140871 8.959424 9.965372 9.208581 10.266402 9.929367 10.334336 8.333516 10.729576 7.851364 5.639620 9.063158 8.957298 11.317857 6.422521 11.098086 10.269833 7.217492 13.918957 11.302026 10.397646 12.334950 10.036979 9.523700 5.574525 TCGA-C8-A1HI NA 0 NA 343 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 2 2 2 6 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 9.86528818 9.83821546 11.53145208 8.10383068 9.23291997 9.42494434 9.72674353 9.67880610 9.66966638 13.18793666 10.24219769 10.77121774 2.29783704 13.43815769 3.21983452 8.87724762 5.82469149 8.58128646 9.13471329 13.43175199 1.37183762 13.90309261 4.45929390 9.57579278 11.54738254 10.32690166 4.09429520 8.72938486 10.12404633 1.04990952 7.66093004 8.05412510 NA 4.33530459 9.90982785 9.49233011 10.14497224 10.28232582 9.64888782 10.63721363 0.04990952 11.14760784 13.96155436 7.05945371 9.03787938 10.33270379 10.78546097 5.12672099 4.54175642 9.18881654 11.47905009 0.04990952 10.95472762 3.40746153 5.51751192 4.09429520 10.00882006 11.99241942 11.01695102 12.15425794 12.73355750 8.12538402 10.67971689 10.28626596 11.25279397 10.56782026 3.98063772 12.04434675 11.18176189 0.04990952 10.30788191 9.33934742 3.69520323 4.44222031 10.54326000 9.67195674 10.35082937 10.12972297 4.17918458 7.43360881 12.21943849 11.64900413 9.95077167 9.18304702 -0.0824020 0.7896800 0.7920000 0.1936000 0.1748300 -0.0490190 0.2194400 -0.0677030 -0.0536110 0.1667000 0.2102400 0.1961900 -0.3175800 -0.3018700 0.0326740 0.0150280 0.0150280 -0.3109600 0.4101600 -0.2102000 0.1952800 3.6569000 -0.2074700 -0.2074700 3.4219000 0.0000000 0.0000000 0.0000000 0.1855600 -0.0824020 -0.0731610 -0.0514510 0.1936000 -0.0490190 -0.0490190 0.2365000 0.2365000 -0.0677030 -0.0536110 -0.0536110 0.1685000 0.1685000 -0.6091200 0.0070826 0.0516720 0.0516720 0.0516720 -0.3018700 -0.2944900 0.0326740 -0.3411300 -0.3204300 0.2076300 -0.3109600 0.4101600 0.4101600 -0.2131800 0.1755800 -0.0546900 -0.3275000 -0.2074700 -0.2074700 -0.2943800 0.0000000 0.0000000 0.1855600 -0.0212350 -0.3326000 -0.302 -0.302 -0.320 -0.320 -0.311 0.099 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 0.000 -0.302 -0.302 -0.320 -0.320 -0.311 0.099 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 0.000 8.29783245 11.67390065 7.79473881 9.31434759 2.10128028 10.47538305 0.04990952 1.04990952 8.75898867 7.95227998 -1.95009048 7.44864826 1.85726444 10.79599928 9.09019474 2.13737236 7.46141560 9.80144889 10.35482656 10.68607632 10.12280121 7.37183326 10.22670143 2.21983452 9.92411785 9.43846045 4.67926051 NA 12.07720621 4.72232940 12.80233781 12.13305177 7.76929371 10.27481096 9.54925253 9.54625938 3.54176262 1.85726444 NA 6.85080442 8.58906384 9.10043370 10.66737237 4.94472260 8.87205335 5.21983065 10.18111883 5.54175952 10.10721982 0.37183762 10.72365565 0.37183762 5.21983065 10.07891253 7.32381679 5.18945692 7.96279423 7.59293686 10.28082597 1.75034924 14.28116359 -1.95009048 10.58882133 NA 8.39309052 6.46353255 9.65769752 8.53874921 12.680785 5.777825 8.896179 13.438158 10.353686 11.771218 13.431752 15.982223 9.164949 9.913704 13.417251 9.354827 9.188817 9.794318 1.857264 9.958673 11.234315 10.6819913 6.1996527 9.0257528 9.3819415 7.6254444 10.0973117 5.7572633 8.2110370 10.2421977 6.5851804 4.0271806 8.8668885 5.2146105 11.0073697 10.0371689 9.2678625 10.1548313 8.8938260 6.1426626 10.0200647 10.1449722 10.7852494 9.3190317 10.8091690 9.3723965 10.5487541 8.1817620 -0.9500905 8.9132006 6.7399034 10.9547276 6.3808212 10.7047647 10.0088201 7.0915644 13.9028001 10.6892456 10.4529169 12.2629332 9.4513179 9.5210719 1.0499095 TCGA-C8-A1HJ 53 0 NA 5 breast stage iia t2 n0 m0 female 2010 NA NA infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.462261e-06 7.976338e-07 9.557466 9.323632 10.988587 8.872944 9.637655 7.985850 8.468997 12.054435 10.743392 13.452464 10.668709 10.905701 1.293370 9.018360 3.186437 8.746923 8.023223 9.532446 7.568153 5.762128 NA 7.176002 6.685677 10.088536 10.714221 6.362521 -1.514161 6.766775 11.613354 3.293356 8.490224 7.995779 NA 4.733929 9.601048 10.629706 9.346315 7.460418 10.581401 10.326782 1.945420 10.102553 14.207904 7.974567 10.140640 10.292151 10.450706 3.733929 -1.514161 9.596487 11.576447 NA 11.297178 4.635749 5.985851 2.485993 10.077059 12.926224 9.545349 11.661865 13.495745 7.097029 11.336777 10.500739 11.400389 10.797185 4.062830 12.045501 10.945948 2.186437 9.694238 10.478588 4.399609 3.655924 8.777175 11.107140 10.689352 9.576778 -1.514161 5.025162 12.333061 13.097778 10.143769 9.866465 0.02011400 0.61016000 0.00504780 -0.69248000 0.70858000 -0.67854000 0.03008000 0.65781000 0.05713500 0.02754900 0.02754900 0.71690000 0.65118000 -0.70869000 -0.69944000 -0.72240000 0.00254770 3.22280000 -0.67248000 0.02726800 -0.70564000 0.75039000 -0.72955000 -0.72955000 -0.01775300 -0.04260300 -0.04260300 -0.07199700 -0.01114700 -0.72850000 0.02011400 -0.72770000 -0.69248000 -0.69447000 -0.68857000 -1.29290000 -0.69881000 0.01913400 0.05713500 0.68782000 0.05956100 -0.73561000 0.00908220 0.03698700 0.04320900 0.04320900 -0.71935000 -0.01197400 0.00338070 -0.73544000 -0.74712000 -0.71092000 -0.71092000 0.05328900 -0.04460000 -0.04950900 -0.69709000 0.03953000 -0.71271000 0.01955400 -0.72955000 -0.72955000 -0.35608000 -0.71521000 -0.00990590 -0.74182000 -0.01995000 -0.00078086 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.685 0.658 0.658 0.000 0.000 0.000 0.000 0.000 -0.695 -0.527 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.685 0.658 0.658 0.000 0.000 0.000 0.000 0.000 -0.695 -0.527 -0.527 7.46328404 11.09125203 5.28041817 8.95564584 2.13563337 12.61190175 2.48599349 5.15842994 8.43728892 8.36405497 3.65592421 8.06407501 6.84794806 12.08207727 9.30538485 3.53039541 8.65091100 11.80779121 9.41081659 9.73511748 8.76387263 6.93308749 10.60494512 NA 7.66839857 9.56281958 4.89539473 NA 10.00268902 0.07093882 13.22351545 12.14187011 9.12624888 9.69606652 10.54196430 11.07214011 6.36252074 1.07093882 0.07093882 -1.51416103 7.93515267 6.24755540 6.20710415 5.28041817 7.75538768 6.11535999 9.81187156 5.75279140 9.95513710 2.87831336 11.95182548 0.07093882 6.23419664 10.66310895 6.61852940 5.86970858 7.27063920 6.11535999 5.78978402 8.09518284 13.73055368 -0.51395501 10.54534852 NA 9.37550801 4.26736350 8.85232632 7.48318375 10.642403 9.193363 7.876173 9.018360 9.987841 11.533469 5.762128 11.822511 9.727987 12.297178 13.407984 12.133013 9.596487 8.820277 4.861042 8.530398 11.143099 10.266954 5.635751 9.254188 9.896455 9.132563 9.257964 3.843552 4.552094 10.668709 12.101289 -0.513955 9.871866 9.432106 11.449984 9.570812 9.804547 7.217323 8.063433 7.144216 12.239233 9.346315 10.858869 9.847948 12.165484 10.756007 10.255015 7.847948 NA 8.403257 7.097029 11.297178 5.685677 9.840253 10.077059 8.938245 15.091831 10.456110 10.583049 11.624596 11.057994 8.908069 1.945420 TCGA-C8-A1HK NA 0 NA 366 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 1 NA NA 2 6 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.31783e-06 3.121176e-07 9.7409847 11.0755056 12.0866628 9.3644954 8.8936622 8.8799440 9.9690276 11.2912435 9.3007134 14.9386998 10.0150787 11.4633741 0.5853472 16.9337632 4.9310968 6.7214602 3.8583391 8.9675871 4.8077156 13.6954259 NA 11.5799124 2.4597988 9.1847031 11.8163443 9.5051798 5.3402097 7.4841768 12.0909694 NA 7.6692458 5.7418283 -0.9997115 4.7008003 10.1108440 10.6123076 9.4700025 10.6981971 10.6833553 11.6927583 12.5708094 10.5380644 13.7978196 6.7447908 9.4801409 10.9061237 11.9110034 3.8077156 5.2098159 9.1360701 11.6914499 0.5853472 11.0296479 3.5239257 5.7418283 4.2482919 9.7560829 12.4240019 9.8012607 11.2697797 12.9956862 5.2291803 11.0491882 10.9886904 11.2119449 11.0708172 5.0227273 12.2684640 11.0049324 NA 9.6269824 10.1418292 2.4584870 5.0447569 8.3644954 8.9369986 10.4145174 10.3251038 0.5853472 9.5559085 13.1213275 11.1589704 10.6842326 9.9019819 -0.3467600 0.6168800 0.6211500 -0.7192800 0.1757300 0.6782700 0.1563600 3.4683000 0.0376410 0.2208300 0.0072217 0.7047600 -0.3290100 0.5945800 -0.2310400 3.6569000 -0.7117600 0.1535200 0.1535200 -0.2371600 -0.2235500 -0.2578700 -0.7362500 3.6569000 0.2899600 -0.7444700 0.1125700 0.1125700 0.0982400 -0.3467600 -0.3467600 -0.3961900 -0.6886200 -1.2394000 -0.2033600 0.1346500 0.1346500 -0.7382700 0.0376410 0.0376410 0.1472600 0.0093098 -1.2453000 -0.3229800 0.0000000 0.4408800 0.1905600 -0.2403400 -0.8138400 -0.2310400 -0.7430700 -0.7178200 -0.7178200 0.1535200 0.1535200 0.1535200 -1.1574000 -0.2235500 -0.2432600 0.2160600 -0.7362500 -0.7280000 -0.1787900 -0.7444700 0.1125700 0.2122300 -0.6681800 -0.2869100 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 0.000 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 0.000 8.1727880123 11.3802805275 4.9072512243 7.8237277095 2.1476648856 12.5946853259 0.0004327436 NA 8.7767939078 6.7282810832 NA 7.9012277384 -0.9997114898 10.6205805458 8.5946851393 1.0003606287 7.7384530572 10.2061539391 11.2542082318 11.7835635904 7.4811915557 8.4536311598 9.8629980637 1.3222743002 7.2857628475 9.7033990609 1.8077258531 -0.9997114898 13.1465315897 1.3222743002 12.1296437422 12.3603847443 7.3490892253 10.0990508240 10.1839960722 9.9384700284 4.8077155507 1.8077258531 0.0004327436 2.8077258531 7.1244821990 6.4012396382 10.6977627013 3.2482919377 8.7159623333 6.3132440375 9.6205805458 6.6150704728 10.5046831515 NA 10.3194683456 1.3222743002 3.6442139338 9.8570819845 6.3394082212 6.5853231294 7.8830036780 7.2949818369 8.7734999178 1.5853471681 13.7279621462 -0.9997114898 10.7919306018 NA 5.8077155507 5.4266270605 9.1501077482 7.2098139943 14.501851 4.357911 10.136711 16.933763 8.459792 11.413195 13.695426 9.171538 8.913250 11.135429 13.005459 6.658573 9.136070 7.229179 2.585323 8.219529 11.691886 1.202481e+01 7.224363e+00 9.208595e+00 1.069733e+01 7.817600e+00 1.166426e+01 4.728280e+00 1.020310e+01 1.001508e+01 8.106269e+00 2.322303e+00 9.766890e+00 8.233093e+00 1.214534e+01 1.072871e+01 5.989046e+00 7.977641e+00 9.028267e+00 7.108885e+00 1.147630e+01 9.470003e+00 1.088071e+01 9.316642e+00 1.132623e+01 9.428721e+00 1.131947e+01 8.699065e+00 4.327436e-04 8.624316e+00 7.778438e+00 1.102965e+01 5.459792e+00 1.122285e+01 9.756083e+00 7.581712e+00 1.369559e+01 1.038892e+01 1.026656e+01 1.207634e+01 1.112384e+01 9.772675e+00 2.700795e+00 TCGA-C8-A1HL NA 0 NA 317 breast stage iiia t3 n1 m0 female 2010 NA no other specify NA asian not hispanic or latino 6 1 1 1 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.13562657 9.73180081 10.76556483 8.47034244 9.14815165 9.44063873 9.30238463 11.05530481 9.72301462 14.17372711 10.74574852 11.10145849 0.04614178 14.00672106 3.85352665 8.72036843 3.56973411 8.70795403 9.03911426 13.08586623 NA 13.57499640 -0.95371850 9.55990359 10.21233916 7.41249787 2.21611336 8.57357486 10.83081093 0.63115086 6.40372787 7.06298406 NA 5.09056977 9.06993036 10.09329990 9.30356387 9.25319038 9.69273475 10.72080968 11.36075931 11.37737291 14.02197924 7.69183423 9.34079679 10.46138961 10.97395403 4.25562913 2.85353663 8.84059195 10.04194315 0.04614178 11.55099505 5.70438785 5.84059164 5.50560833 10.74140437 12.43122954 10.23661806 11.79562650 12.49248399 7.09602460 11.12566085 10.73180090 11.17674662 10.52089600 3.85352665 11.86075850 9.00327812 1.63115086 9.96876038 8.79772021 2.36809782 5.47244228 10.89636291 10.13430168 9.82671579 9.49015553 0.04614178 9.01484288 11.83957615 11.06193952 10.25806436 9.62266044 -0.34979000 0.66604000 0.94017000 0.00000000 -0.00318590 -0.36227000 0.00388540 -0.00429290 -0.00429290 -0.33491000 -0.58872000 -0.36303000 0.00263570 0.00861350 0.01084200 0.78331000 -0.73784000 0.00402430 0.00402430 0.00722170 0.03242200 0.39313000 -0.70460000 2.50180000 3.29120000 -0.30334000 -0.33722000 -0.33722000 0.00507580 -0.34979000 -0.34979000 0.00388540 0.00000000 -0.75806000 -0.03135900 0.00388540 0.00388540 -0.00429290 -0.00429290 -0.03299400 0.02286500 0.00332990 -1.20080000 -0.74768000 -0.74768000 -0.00341680 0.06794800 0.00861350 0.01153900 0.01084200 -0.69649000 -0.74584000 -0.75828000 0.00402430 0.00722170 0.00722170 0.00722170 0.03242200 0.00083195 0.02820000 -0.76467000 -0.69875000 0.00277450 -0.29579000 -0.33722000 0.02946600 0.01516800 -0.78294000 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 0.000 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 -0.114 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 0.000 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 -0.114 8.2409330 12.4313644 5.0003742 9.1715894 2.5797353 11.1435498 0.6311509 NA 8.9620553 7.5930706 NA 8.2574317 0.6311509 10.8131190 9.2482998 2.7466137 7.6198231 9.7247761 5.2749959 10.5137816 8.4634169 7.1857278 11.9708030 2.3680978 8.5756066 9.3373467 1.3680978 -0.9537185 10.1216552 2.7466137 12.6311386 12.4062001 9.0234561 9.7422742 8.1041678 9.5198817 3.8010655 3.7466137 NA 2.7466137 7.4037279 7.6828008 10.9941782 4.4724423 7.8070625 6.4212149 9.6691430 6.5056083 10.1468384 -0.9537185 10.3379223 2.0461767 4.8535316 10.0799431 6.6222451 1.8535167 8.8093884 8.4146827 8.7326766 NA 14.5324140 1.3680978 10.4201287 NA 8.9709885 6.9349198 8.3035639 9.0134022 13.235388 7.322300 8.587273 14.006721 10.588724 10.768130 13.085866 12.749214 8.226085 10.207938 13.207702 8.700812 8.840592 10.009072 3.438492 9.560890 11.780251 10.745315 4.538991 9.136289 8.553971 8.203801 10.937208 4.472442 9.931110 10.745749 5.891667 NA 6.953066 8.424970 10.852323 10.433116 7.029170 9.355652 9.530999 4.255629 11.363385 9.303564 10.624077 9.244621 10.873122 10.061591 10.347101 7.791010 NA 9.101309 3.569734 11.550995 7.767275 10.357357 10.741404 7.416863 13.937912 10.543529 10.195288 11.512253 10.568758 9.734426 3.569734 TCGA-C8-A1HM 74 0 NA 375 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 7 3 4 1 NA NA 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 7.525501e-06 2.080784e-06 9.5461857 9.1716885 11.2890779 8.9185696 9.0749421 9.8690271 8.8312832 10.9058086 8.6183576 14.0088530 12.0476106 10.9603091 NA 12.0917847 2.3808126 8.1478022 6.1112150 7.9657843 9.2877124 12.7710885 0.9213602 13.6175970 5.2251708 9.3094075 11.2339895 5.1502103 -1.0785637 10.4137241 11.3976301 0.5063988 8.0246782 6.0609423 NA 4.9437573 10.9015298 11.1858328 9.6148771 11.8642712 10.4122410 10.4566655 1.2433035 10.7609877 13.6673270 8.3811700 8.9739582 10.9329668 11.4515526 3.6218292 3.6762787 9.8078488 9.8025041 NA 8.8972380 5.5063512 8.7871236 5.9437573 11.0121642 12.4744194 9.4566655 10.3523654 12.9442781 7.1357093 10.0526040 9.8565552 11.3792840 10.6488852 5.5938169 13.9362824 8.9780280 NA 10.8387622 10.1173775 2.9249930 5.4759798 11.7633476 10.3581017 10.3808217 10.6866763 3.1693157 4.7542782 12.3413503 10.3429290 10.1044052 8.7871236 0.0019418 0.9473100 0.7113300 0.3482700 0.5743400 -0.2398500 0.4616100 0.1936000 0.4251900 0.6860800 0.3106500 0.9277700 -0.2784700 1.3789000 0.0742650 3.6225000 -0.0158790 0.5805900 -0.0096806 -0.1321100 -0.2184900 0.2316300 -0.2841800 0.1026400 1.4169000 -0.2929600 0.1764800 0.8259600 1.0009000 -0.2383800 0.0019418 -0.5075300 -0.1515700 -0.2437500 -0.7647500 0.1319900 -0.2477600 0.1936000 0.3974500 0.4094400 0.2151400 -0.2698500 -0.3916300 -0.2538200 -0.5051500 -0.0178030 -0.0178030 -0.7969500 -0.7788800 0.0742650 0.0742650 -0.0176660 -0.0176660 0.5805900 -0.0153290 -0.0153290 -0.0419740 -0.2436300 -0.2435000 -0.1187400 -0.2841800 0.1026400 -0.4967300 -0.3918500 0.1764800 0.1993800 0.4944100 -0.2637200 0.301 0.301 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.274 -0.110 -0.182 0.103 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.311 -0.236 0.000 0.000 0.000 0.301 0.301 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.274 -0.110 -0.182 0.103 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.311 -0.236 0.000 0.000 0.000 9.2444449 11.1571052 7.7158062 8.7917548 5.0804530 10.5728904 3.1693157 NA 8.4132433 8.2833338 NA 5.7917542 2.3808126 11.2399330 9.0634973 3.2433187 7.3137075 9.1870051 10.5438996 10.1459948 9.2009194 8.1597947 9.5287206 3.0913106 7.0194217 9.2877124 1.7287477 NA 10.9291183 0.9213602 12.4057096 12.5024730 6.9157432 10.2044785 11.7200644 9.7052069 3.9657843 3.0088454 NA 4.0506758 8.1597947 8.4011705 10.2556635 1.2433035 8.2420327 6.7287450 10.2877124 4.1308403 9.8922151 NA 9.8929338 3.3808264 3.4449585 9.1623843 6.4541742 6.7287450 9.2399331 9.1161469 8.8550809 0.5063988 13.9259618 2.3808126 10.3466060 NA 9.5370197 3.1693157 9.1716885 8.0272989 14.47273855 6.92701464 8.06094176 12.09178471 10.05067324 11.02106672 12.77108846 11.65270921 9.44004338 11.41474527 13.75180634 10.21140906 9.80784883 8.50070607 -0.07856367 9.47597899 11.70520695 10.482201 6.460549 9.096316 8.595582 10.179367 10.036356 8.190517 7.456666 12.047611 8.000875 -1.078564 9.830533 9.957426 7.927015 10.652285 9.109979 8.931219 12.221886 8.236539 11.832872 9.614877 10.580940 9.470212 11.138439 9.677112 10.906165 8.590275 6.614878 9.176112 8.272329 8.897238 4.206792 10.496457 11.012164 8.216011 13.046965 10.475979 10.745155 12.883292 9.495984 9.133278 3.779375 TCGA-C8-A1HN 56 0 NA 394 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 1 1 1 NA NA 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 9.710324e-07 4.508365e-07 9.82464106 9.91691085 11.51402814 8.37002867 9.67575949 9.49450462 10.29505889 10.60273830 9.81748768 13.76786870 11.20940322 10.45708533 0.07765319 13.30366752 3.72155859 9.32682044 4.36310798 8.48497471 8.31849852 13.06683534 4.38149104 14.17898510 -1.92248353 9.27932248 11.80743394 7.78506595 1.07772154 8.54633116 11.46975602 -1.92248353 7.63037635 7.63037635 0.07765319 2.72156953 9.78937404 10.16218322 9.56303321 9.97252480 10.17343367 11.39554351 0.88502764 10.38405359 14.13523341 8.04216332 9.60860099 10.58475829 11.67284788 1.98458935 4.47002269 8.91927125 9.58599700 -0.92221011 10.21277493 3.16517232 6.27246370 4.91059836 10.18623151 12.15151385 10.26999975 10.52814503 12.89108738 7.85742620 11.21661874 10.53566750 11.25714961 10.74946915 4.50397199 12.19697237 10.67808458 NA 10.37834558 8.89868361 2.33018549 5.93568839 10.78312340 9.98347007 11.07770699 11.54658554 4.80562781 7.39511937 13.07581256 10.44757692 10.17079436 8.61103660 -0.0494520 0.4775200 0.4728200 0.0866370 0.4223200 2.8746000 0.0516430 -0.0138430 0.0048876 2.1190000 0.1001300 1.6358000 0.0273280 -0.4722800 -0.4786200 0.0274240 0.0274240 -0.1911400 3.6569000 -0.4848400 0.0233410 0.5155600 -0.4257300 0.5187000 0.9554500 -0.3786700 0.1087400 0.7993300 3.6569000 -0.0603920 -0.0494520 -0.0040444 0.0408560 0.5046000 0.4696000 -0.0342500 -0.0290660 -0.0138430 -0.0138430 0.0294370 0.0281720 0.3818500 -1.0696000 0.4423700 -0.0391490 -0.4920600 0.1626200 -0.4722800 -0.3929900 -0.4476200 0.0274240 0.0321000 0.0388840 -0.2167900 0.0154190 0.0528480 -0.4789400 -0.4668800 -0.1411900 -0.7548800 -0.4257300 0.0417120 0.1109000 -0.3786700 0.1087400 -0.9789200 -0.3060400 -0.4012900 -0.472 -0.472 -0.448 -0.448 0.000 0.000 -0.479 -0.467 -0.123 1.014 -0.423 0.093 0.519 -0.389 0.111 -0.270 0.109 0.000 0.452 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 0.000 -0.472 -0.472 -0.448 -0.448 0.000 0.000 -0.479 -0.467 -0.123 1.014 -0.423 0.093 0.519 -0.389 0.111 -0.270 0.109 0.000 0.452 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 0.000 7.51441819 12.10154795 6.79880615 8.52479008 -0.56618592 10.47831965 0.39966330 NA 8.50606713 6.68503748 NA 6.48493243 1.98458935 11.56391353 9.04132568 4.56955793 5.49556086 9.88948297 5.55344038 10.06816561 9.96334999 7.74836328 10.66407772 3.32563106 9.03408308 8.87779792 2.32564545 -1.92248353 10.78204295 2.98458935 12.80541478 12.10992495 7.21725786 10.22618361 8.46464703 9.65890749 2.66266126 0.07765319 -0.33733874 6.74659225 8.90187031 9.25948035 10.90723154 3.50397199 9.38458886 5.80562781 10.25885925 4.84589144 9.78204303 NA 11.86448711 0.88502764 4.26752831 10.36366981 6.85506156 1.66266126 8.37576972 7.25013448 5.07770872 NA 13.67950679 0.07765319 10.42117038 0.66266126 7.39285662 3.77814548 9.54174210 8.06922902 13.8717847 7.1384029 9.4581681 13.3036675 9.7403753 10.9534564 13.0668353 14.1617472 8.6841122 10.1777122 12.2425354 10.7242657 8.9192712 8.2798306 -0.3373387 8.6560798 13.5450578 10.12346665 6.71795191 9.83259448 8.96264069 9.88586671 10.58822891 6.32563466 8.58451046 11.20940322 6.87536847 0.66266126 8.68133330 8.58685855 9.02826276 9.50344733 8.85578419 8.96721098 9.95575785 3.39963596 11.55635910 9.56303321 10.25294460 10.14446897 11.09538535 8.64280913 9.98947341 8.89948110 5.25761790 9.17401360 2.53714694 10.21277493 6.26258161 11.01195073 10.18623151 7.08052230 13.42231498 10.64542544 10.87698858 11.47163366 9.73189548 10.21020668 0.07765319 TCGA-C8-A1HO 34 0 NA 375 breast stage iiic t3 n3 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 10.9568567 10.2122590 12.2380046 9.4323989 8.6080374 8.4477742 10.9092898 9.9869878 9.0630040 14.2752431 8.7367013 11.0485802 -0.6968914 10.8593824 3.0580047 8.0795488 6.5792405 8.9415518 8.6683447 13.4820919 2.1104635 15.5903233 NA 9.1757908 11.7989709 10.4576176 1.3031086 7.1826992 9.3899157 0.3031086 7.8009678 6.3143431 NA 3.6954371 10.8056991 10.1204993 9.1080537 10.5643294 9.6830357 12.0192923 -1.6966576 11.3089159 13.7252135 8.6148640 11.2603994 11.1725170 10.5058519 5.1610976 7.0000834 9.0630040 10.7538117 -1.6966576 11.1365990 4.7625455 4.9469741 3.2099991 9.6991855 12.2470043 9.9044224 11.7083904 12.9414953 6.1979342 11.1214984 12.0280965 11.3343002 11.4320769 4.7293787 12.0515184 12.0087483 NA 10.1284723 9.9626658 3.7303900 4.5125682 10.5295281 10.4050916 10.9315615 11.1182990 2.8266807 8.9169053 10.9349750 9.9750992 10.5373346 9.0293342 0.00541390 0.00541390 0.00541390 0.00110930 0.00110930 0.48775000 0.01293400 0.72754000 -0.77769000 3.65690000 2.99640000 0.76989000 -0.00360110 -0.00940160 0.01530800 0.81630000 -0.76458000 0.04230700 2.08800000 0.04996600 0.01488800 -0.00332430 -0.78420000 -0.77150000 3.65690000 0.00000000 0.00000000 0.00000000 0.04443200 -0.00705760 0.00541390 -0.00636680 0.00110930 0.48775000 0.54683000 0.01293400 0.01293400 0.72754000 -0.77769000 -0.80527000 -0.00373950 -0.00373950 -0.84923000 -0.01003000 -0.01003000 -0.01003000 -0.00138580 -0.00940160 -0.02463700 0.03157700 -0.75002000 -0.81013000 -0.81013000 0.04230700 -0.73565000 -0.73565000 -0.75030000 0.01488800 -0.00332430 -0.00636680 -0.78420000 -0.77150000 -0.79336000 0.00000000 0.00000000 0.04443200 -0.00013862 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 0.747 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 0.747 -0.531 7.2009614 10.7874353 8.2717828 8.8615367 0.4439249 12.1663342 -0.6968914 NA 8.3488755 6.3583980 NA 6.3031159 -1.6966576 10.5259108 9.0605060 -0.6968914 7.7768219 9.3392895 9.0044225 10.1895747 10.0826178 8.4129466 10.0596722 2.3031086 9.7671511 9.6759810 1.8880711 -1.6966576 10.2017173 3.8266807 12.0768733 12.3032920 7.3958734 8.8871390 12.6010352 9.4792890 6.4272374 2.1104635 -0.6968914 5.8109109 9.0052885 7.2514834 11.5359865 3.2573124 9.6730949 5.6868198 9.7193856 4.0844725 9.6306685 NA 10.8504925 3.9178232 8.7501991 9.8829126 7.5553323 5.1857595 9.2360687 8.2485600 8.3745783 NA 13.6603586 NA 11.1926198 NA 7.4401067 5.4929395 8.6529500 7.5557817 13.9432261 5.9030286 9.4142516 10.8593824 10.8842671 9.8667889 13.4820919 13.5925585 8.3624602 10.8158564 12.3768391 11.4637752 9.0630040 7.6824939 0.3031086 9.6911332 11.3899156 11.4978727 7.1517391 9.2301530 9.4464992 8.1360057 10.7788518 4.3031159 9.5885181 8.7367013 7.0975318 0.6250834 4.4528656 9.1028751 9.0225049 9.7834012 8.7919602 9.5064639 12.1338292 5.1857595 11.8300821 9.1080537 11.5688774 9.1462517 10.8225065 8.0496302 10.9295094 8.6835768 6.9577521 8.3874991 6.0580025 11.1365990 6.7584431 11.2362533 9.6991855 7.7522642 13.7438229 10.7846631 9.5862042 11.3353339 9.7574152 9.7999696 1.3031086 TCGA-C8-A26V 47 0 NA 616 breast stage iiia t3 n2 m0 female 2010 NA yes infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 2 NA NA 1 1 1 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.838026e-06 6.242351e-07 10.0986001 10.1695057 11.8452042 9.7961741 8.5302456 9.9667415 9.9447399 9.1747969 9.5894175 12.7558625 10.5293763 10.2413424 -2.1668265 11.3315041 4.7521438 9.1869764 7.4699031 8.4662735 8.9830252 12.7145355 1.1552311 14.2923735 6.0906650 9.2363859 10.4222269 6.7250622 -0.1666646 9.6943650 11.5972167 -0.1666646 7.4238655 8.3859474 -1.1668265 3.6146392 9.9306519 10.7420460 9.7001706 11.4260855 10.5462350 11.4173011 1.5337128 10.3346178 14.7974723 7.9943597 9.9944036 11.0798703 11.4440723 3.9207411 -1.1668265 9.3931332 12.2212954 NA 10.9601439 4.4031314 5.6406325 4.4031314 9.7983409 11.7784476 10.3678242 11.4501715 13.0891550 9.0038290 11.3138159 10.6408383 11.5806320 11.0086718 5.0812075 13.5447300 11.0103861 -0.5818640 10.3878670 9.0536566 2.3018510 4.7757933 9.9776177 9.0421220 9.9020564 10.0707868 2.0032064 8.7013290 12.8033391 11.3112893 10.2330901 9.0584856 0.0165650 0.0165650 0.6871900 -0.7178200 0.6995100 -0.0297210 0.0000000 0.0026357 0.0533790 0.0143300 0.0143300 0.0143300 0.0154470 -0.7021700 0.0207630 0.0196700 0.0196700 -0.0473120 0.0122370 -0.7050500 0.0055529 0.0223040 0.0102850 -0.6936900 0.0135630 -0.0478010 -0.0478010 -0.0478010 0.0256710 0.0165650 0.0165650 -0.0091286 -0.7178200 -0.0791770 0.6215400 0.0000000 0.0000000 0.0026357 0.0533790 0.1055500 0.0125160 0.0125160 -0.0689420 -0.4039500 -0.4039500 -0.0069195 -0.0069195 -0.7059400 -0.7059400 -0.0023026 0.0196700 -0.0313590 -0.0313590 -0.0473120 0.0122370 0.0122370 -0.7050500 -0.7024400 0.0223040 -0.7096200 -0.7081800 -0.6936900 0.0086135 0.0148780 -0.0478010 0.0256710 -0.0274110 0.0338310 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 -0.143 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 -0.143 7.5964902 12.0680956 8.5611986 8.6138178 1.2927229 10.8780137 0.4182439 -2.1668265 8.4699027 9.7386652 -2.1668265 7.5162729 5.3251309 11.0175336 9.2389514 3.3878726 6.6406325 8.7090276 8.6873673 9.7885648 9.6423629 8.0941975 10.8785259 0.4301782 7.0006964 9.6244411 1.0031704 -2.1668265 10.1018201 2.3568481 12.2810071 12.5307887 7.8076930 9.8660127 10.2658200 9.7044133 3.6406325 -0.5818640 -0.5818640 5.5197778 8.8076927 9.2673850 10.6303317 0.6406209 10.0180388 6.0329516 9.6815099 9.0770472 9.5462349 -1.1668265 10.7155391 2.5881569 3.8332747 9.8094054 5.9943602 2.9207316 10.5791625 6.7932795 5.3251309 4.0231045 13.7095313 -2.1668265 9.9440877 NA 8.9925189 2.7401720 8.2865490 8.4598996 12.984549 6.772857 9.289119 11.331504 9.510557 11.653657 12.714536 11.375464 9.686588 10.968827 12.637308 8.540637 9.393133 9.363684 NA 7.420118 11.168250 11.0220215 7.4866782 9.3054612 8.6276940 8.1404791 9.8291300 6.1416167 7.1529500 10.5293763 8.2605907 6.6276944 5.4257346 6.9621487 12.3278213 10.5937902 6.4950555 8.3830627 12.5172596 4.1370608 11.6742940 9.7001706 9.8385518 10.1775740 11.3672161 9.7834694 11.0047677 9.7090274 0.8332544 9.6881893 3.6661658 10.9601439 8.1597074 10.5569391 9.7983409 7.9100934 13.0768214 10.9331190 11.1360599 12.7319740 10.5432236 9.4064518 -1.1668265 TCGA-C8-A26W 58 0 NA 381 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 4.508365e-07 10.3452531 9.4373203 11.0051933 8.8759103 7.9829474 9.0825890 9.1090074 10.1097343 9.2782859 13.0641417 11.5791086 10.4054056 1.4767446 14.2392250 3.0617071 8.6060220 6.6705104 8.3483364 12.4664884 12.6240713 0.1548424 13.9762861 7.7584371 9.5558558 10.9394459 7.1632401 2.3247242 9.2336290 10.6971175 0.1548424 7.6183356 7.9540928 -0.8452872 4.8827311 9.4963299 10.5977545 9.9258877 9.9557109 9.9101159 11.0496289 6.5428276 10.7884874 14.6033468 7.8791035 10.7411794 10.7072401 11.8753760 5.1090095 2.4027495 9.4896431 11.9542951 -1.8452872 10.6429023 5.0855479 6.9781785 5.2943634 11.0931042 12.0674198 10.1463329 11.6881408 12.3066204 7.8094472 11.0452653 10.4140777 11.7498354 10.5333768 3.9877029 11.9969650 11.2528432 2.5471290 10.5980137 9.2262735 4.0172627 6.2422748 10.6839975 10.2669247 9.3575472 10.0259462 4.9492268 8.9171930 12.4533749 12.4016259 9.6915439 10.1006207 0.0095883 0.0095883 -0.0074720 -0.6036100 0.5877500 0.5802300 0.0844980 0.0175440 0.0029133 -0.0918160 -0.6070900 0.2872300 0.0252500 3.4404000 0.0593660 3.6569000 -0.5940000 0.0095883 0.0036738 -0.0994870 0.0279190 -0.0694660 -0.6189200 3.3647000 -0.5922100 -0.0012473 -0.0393940 0.4722100 0.0161460 -0.6214000 0.0095883 -0.5384500 -0.6036100 0.0027745 -0.2459400 -0.5427000 -0.4897400 0.0175440 0.0029133 0.0147490 0.0137720 0.0282000 -0.6451400 -0.0047079 -0.0047079 -0.0047079 -0.0047079 -0.5941900 -0.1597500 0.0593660 -0.1218500 -0.5940000 -0.6157900 0.0095883 0.0036738 0.0036738 -0.0902290 0.0279190 -0.0694660 -0.6096000 -0.6189200 -0.5888200 -0.0167040 0.0023731 -0.0393940 0.0111210 -1.2214000 0.0277780 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 -0.119 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 -0.119 9.4471326 12.6058934 7.4145542 10.0500076 5.1401979 11.0632037 3.2422671 -0.8452872 8.5363541 7.2019347 -1.8452872 7.5248880 1.8552323 11.3039231 9.3241096 4.9096963 9.1667370 9.1399414 8.1477493 9.6968756 9.7005236 7.9063549 10.3645690 3.8552522 7.6566480 10.2452544 3.3247386 -0.2601519 9.8737720 3.1090095 12.1834942 11.8978573 7.9394458 10.0469743 10.6563995 9.5904813 4.5123660 0.7397617 -1.8452872 2.7397833 8.8810292 9.5604844 10.9412849 5.3544839 8.4891290 6.9813595 9.8081039 6.3247368 8.9320665 NA 10.1345936 3.0617071 4.2633349 10.0582938 6.7694835 6.2737527 8.8996448 7.8535160 7.4448302 -0.2601519 13.6497604 1.4767446 10.1381609 NA 7.8569838 5.1548100 8.2422738 8.9693934 15.449784 6.622416 9.127791 14.239225 10.468828 10.405702 12.624071 11.418227 8.555018 10.444542 12.737953 9.623435 9.489643 9.644157 3.154810 7.146332 11.023441 11.339067 6.892903 9.300743 9.316573 8.698810 10.844534 7.853516 8.185478 11.579109 8.048112 1.324753 5.638627 8.430598 9.690572 10.386332 6.339686 9.221573 10.227948 7.223590 12.576773 9.925888 10.831870 9.984930 11.026139 9.543367 10.624961 8.200571 3.678376 9.221116 7.447133 10.642902 6.630544 10.793842 11.093104 7.688355 13.801679 10.000301 10.244593 12.142164 11.347720 9.564732 1.324753 TCGA-C8-A26X 58 0 NA 376 breast stage iia t1 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 4 NA NA 2 6 2 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.080784e-07 9.4235885 8.8635005 11.1505799 8.4226232 8.2175085 9.8769540 9.1791547 10.0937981 11.3972948 13.5666191 10.3221559 10.3544048 0.4625759 13.7176989 8.2785382 10.6317109 5.5215156 8.9124577 5.4322479 12.0939497 0.4625759 10.0223169 1.8776657 9.3765079 11.9619687 8.6392097 2.1995938 10.7464812 11.5817784 -1.1224913 8.8620769 7.4360794 -0.1223343 8.1421014 9.4905270 10.1415147 9.2319080 9.9644583 9.9604729 10.5269148 0.4625759 10.0889386 14.9274646 6.2890008 8.9069459 10.9230770 10.2991975 4.1255850 5.2526995 11.9031442 12.1909668 NA 11.3200838 5.4322479 7.8520731 6.8832836 9.8937704 11.8820547 9.9704157 11.7732339 12.5273639 6.4849888 10.4206904 9.8923765 11.1055753 10.6454292 4.3370902 10.5667830 9.2241722 -0.1223343 10.3355525 9.3933585 1.0476082 6.0069420 10.6986353 9.6013195 9.1279569 9.5509676 3.5215156 9.4168174 13.0415441 12.8852991 9.2352106 9.1208325 -0.1072300 0.2813700 0.2813700 0.0994330 0.0820430 -0.1097200 -0.2834600 -0.1105100 -0.3226300 -0.3096800 0.1000200 0.3398200 0.2850100 -0.1013900 -0.2662500 0.0000000 0.0000000 0.0840650 0.0840650 -0.2934300 -0.2341000 0.2873900 -0.3380200 1.0295000 0.4561500 0.0688080 -0.4786800 -0.2128000 -0.0737430 -0.1010500 -0.1072300 0.1049700 0.0994330 -0.0971000 -0.1031600 -0.3035700 -0.3035700 -0.1105100 -0.3226300 0.3028200 0.4975300 -0.1043400 -0.3096800 -0.0989450 0.0016642 -0.3088600 -0.3088600 -0.1013900 -0.0730760 -0.2710900 0.0000000 -0.3069000 -0.1493900 0.0840650 0.0840650 0.0966700 -0.2934300 0.1064300 0.2596500 -0.3056900 -0.3060400 -0.3208900 -0.2850100 0.0672320 -0.2128000 -0.0737430 0.0795910 0.0994330 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 0.000 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 0.000 10.0056529 12.7055967 2.0475733 9.1172571 5.6860438 10.8054365 1.4626282 -1.1224913 8.4090400 8.3992591 NA 8.0500859 3.4626151 11.2480736 9.5491996 NA 9.6858184 8.6021725 9.1100795 10.1549460 10.2674942 6.5571389 13.0375299 2.3370831 7.4051355 10.0754896 5.0871106 NA 10.1797263 2.7845459 13.3372183 13.2639927 8.5798314 10.2896992 9.3226734 9.9604729 7.2955109 4.7356413 NA -0.1223343 9.8024711 10.1196418 9.2040881 4.1995860 9.5824527 8.2505235 10.3473005 6.6123687 8.7845491 NA 12.4769903 3.4012209 4.7356413 9.4436079 7.6193617 9.9591420 9.9717362 9.3894113 11.6497669 5.5641586 14.0993967 0.8776657 10.5015401 NA 8.1653708 5.4626217 7.9940026 9.2208443 11.488222 6.353392 9.408065 13.717699 10.037530 11.359962 12.093950 8.906946 8.917948 10.256495 13.008792 10.094404 11.903144 10.652034 1.684998 8.050086 11.272121 10.420690 6.814297 9.372514 7.860652 7.863501 8.894105 7.581562 7.243980 10.322156 8.975691 2.877666 4.550082 8.146785 10.694642 10.422623 8.857798 8.410988 8.598758 10.301300 11.441403 9.231908 10.817972 10.043194 10.737193 9.879770 9.934973 7.766402 6.345263 9.190213 10.512016 11.320084 6.980946 11.431768 9.893770 7.181440 14.035041 10.705398 10.657378 12.296302 10.999192 8.615751 5.564159 TCGA-C8-A26Y 90 0 NA 394 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 1 NA NA 2 6 1 2 5 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.706243e-05 5.16728e-06 10.545809 9.121887 11.764697 9.661514 8.959370 10.777201 11.000671 10.422585 11.068010 13.467934 10.435711 10.409988 4.558157 12.178973 4.357461 9.492270 6.838266 8.275790 10.088222 13.034838 2.098723 10.491657 7.124261 9.630108 10.037466 9.860278 2.378845 9.166353 11.611890 2.814940 8.127422 7.620046 NA 3.576776 10.173632 9.740004 9.701823 9.864545 9.249924 10.965343 5.357461 7.478724 14.463428 8.349052 8.852659 10.736645 11.239191 6.998730 3.539295 9.039564 12.479883 -1.708396 9.609914 3.648926 7.405113 4.830529 8.161736 11.861820 10.265786 11.668175 12.947908 8.604254 10.247384 9.506297 11.672238 10.920500 5.046260 12.935622 7.468791 2.198274 11.014392 9.060383 3.127303 3.461293 11.210980 11.005831 10.203886 9.267935 2.935233 5.005616 13.038620 11.894998 10.271154 9.208743 0.8149300 0.8180600 -0.0633010 0.0162860 0.7337900 0.3833700 -0.0552290 0.0000000 -0.3553300 0.0062481 0.0062481 0.0413170 0.0234280 -0.3536200 -0.3468700 -0.3468700 -0.3468700 -0.4066100 -0.3339900 0.6077400 -0.3260000 -0.3687300 -0.3507600 0.0301690 0.0301690 -0.3273600 0.2113100 0.0168450 0.7684900 0.0579390 0.0349590 0.3145000 0.7117000 0.3626400 -0.4294200 -0.0638380 -0.2172600 0.0000000 -0.3553300 -0.3553300 -0.3849300 0.2155700 -0.0216470 -0.3445800 -0.3382500 0.2211300 0.2753700 0.0088920 -0.4053900 -0.3469800 -0.3468700 -0.3468700 -0.3468700 -0.4066100 -0.3397500 -0.3506500 -0.2070900 -0.3409000 -0.3635200 -0.3499600 -0.3507600 0.0301690 -0.6371900 -0.3120200 -0.3324800 0.0225850 0.3603500 -0.7554700 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 0.000 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 0.000 7.6879761 10.7464416 3.0462640 8.5558139 6.5460687 10.7296433 4.0727318 2.6836965 9.2470213 7.7610133 4.0192927 6.2629142 6.6533152 11.7113315 9.2800560 4.1740148 6.2455679 9.7986704 8.5522910 9.7410358 10.2136026 7.2513735 10.8688001 1.6132959 8.1210942 10.0841616 2.4612928 NA 10.7869765 3.8149298 11.4776403 12.9608654 7.0362055 10.1907282 8.6412053 8.9708514 5.8227531 2.9352334 0.6133431 9.8559972 7.8227525 9.1392116 11.2022014 2.0987227 11.0068807 7.7425823 10.2973467 5.5767730 9.8129718 -0.7086322 11.9136520 0.2913678 4.5201896 9.9501005 8.9477784 4.6133018 7.9883387 6.8763340 5.5201896 11.6363607 12.5630532 -0.7086322 10.7912172 -1.7083964 9.4200101 5.5008244 9.6766944 9.5087232 9.1734410 9.1655841 9.4768663 12.1789727 11.6221229 11.2337025 13.0348383 8.6389926 8.1586501 9.7630465 13.1863311 6.8949972 9.0395642 7.7446421 -0.1235911 7.8188480 12.2105139 11.373687 5.420654 9.960256 8.616677 9.613863 10.265571 6.092271 7.534545 10.435711 9.771152 5.700762 7.711332 8.952927 11.023115 11.829196 8.963797 9.990076 9.506297 5.410314 11.933381 9.701823 10.067804 9.645070 10.900088 9.247021 11.206130 7.962028 2.539308 9.177045 6.644518 9.609914 5.648923 10.726260 8.161736 7.322038 12.337216 10.771152 10.604254 13.408081 9.862176 10.453448 1.098756 TCGA-C8-A26Z NA 0 NA 252 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 1 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 1.387189e-07 10.1232213 10.1531268 12.2963281 9.6577238 9.4881999 8.3145098 10.2439338 10.3911544 8.4267470 15.3622314 10.7454068 11.5267848 -1.7393721 13.5002197 4.5085111 7.9662165 5.6868479 8.4785415 7.3691087 13.5575001 -0.1544096 13.6177235 0.8455101 9.1897756 11.8182869 8.8455465 1.2605677 8.4052423 10.0366057 2.2605978 7.0054180 6.7363167 NA 3.3898696 10.3506964 10.1768366 9.5126579 10.4417362 10.6098651 11.9273627 1.5825078 11.9722509 14.0522556 9.7050759 9.9321250 11.2003467 11.6735506 4.4504063 7.4602560 9.1689764 10.5375807 NA 11.2864156 4.7997453 4.0154708 4.7841480 10.8057897 12.0390718 10.1519879 11.9137649 12.4088221 8.6625299 10.0345473 9.6045857 11.1230276 11.2453584 5.3795239 11.8287776 12.2832985 -1.7393721 10.2735575 9.2995029 3.0240005 3.8752984 10.0488944 10.3619031 10.6897291 10.3697616 1.2605677 7.7841460 11.9722509 9.8166109 10.3596029 9.2549374 -0.5281800 0.9905600 1.0199000 -0.0083761 0.0000000 0.0070826 -0.0019399 -0.0310860 -1.0490000 1.1340000 1.1340000 0.6320700 0.4987400 -0.0263100 1.0228000 2.8511000 -0.5429000 0.4354700 0.4771800 0.0019418 -0.0256210 0.4193200 -0.5476400 0.4668700 0.4668700 -0.5842200 0.9039200 0.9039200 0.4980500 -0.0757450 -0.5281800 -0.5372600 -0.0034250 0.0070826 0.0130740 -0.0167040 -0.0060904 -0.0365380 -1.0490000 -1.1404000 -0.6256000 0.5126300 0.0908650 0.5009600 0.4285600 -0.5618600 0.5039400 -0.0263100 -0.0116110 0.7960700 -0.7937700 -0.5429000 -0.5690200 -0.0291750 0.4771800 0.4771800 0.0019418 -0.0256210 0.4064300 -0.0887720 -0.6047700 0.4668700 -1.0688000 -0.6180600 0.9039200 -0.2220700 -0.0204120 0.4902700 0.000 0.000 0.000 -0.486 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 -0.138 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.501 -0.061 0.000 0.000 0.000 0.000 0.000 -0.486 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 -0.138 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.501 -0.061 0.000 0.000 8.4930048 12.8619485 8.2220336 9.3440633 3.3219281 11.0598655 -0.1544096 NA 8.8342312 8.6432079 -1.7393721 7.4641275 0.8455101 9.9365409 8.8045825 3.9330060 7.1371008 9.3239791 8.1629592 10.6260862 10.3303962 8.7723367 9.5620800 1.0679140 8.8853794 9.2995029 1.8455503 4.3898696 10.5091046 3.0154797 11.7767764 11.9665402 8.3898671 10.5811025 7.9259199 10.0308348 6.5779967 -0.7393721 0.8455101 1.7200157 7.3104328 8.1779562 10.6558503 3.0679312 10.4665603 6.1371018 10.2829517 5.1913218 10.4001353 NA 9.1853963 2.5085047 4.4894016 9.9710503 7.0774396 3.5085174 8.0647147 7.5915007 6.7524368 1.2605677 13.5578943 -0.1544096 11.4913549 NA 8.2364319 5.5367088 8.6689137 9.4242335 14.895510 5.822827 8.700415 13.500220 10.322630 10.710506 13.557500 13.218955 8.391155 10.964920 13.061838 10.164842 9.168976 8.563223 1.430499 7.974829 12.867799 10.7403642 7.8417845 8.8132531 9.2780884 9.0411236 10.7645810 4.7200157 9.4273747 10.7454068 7.1853968 0.5825560 4.3266740 8.0467393 10.2839918 9.5694917 8.6657253 9.0129644 10.8358868 4.9330107 12.8407600 9.5126579 10.0558118 9.2125971 10.2549373 9.6153843 10.2524600 9.2619922 -0.7393721 8.6038029 5.0287680 11.2864156 7.7342896 10.9391840 10.8057897 7.4330112 12.7198484 10.4020524 9.9957168 12.8052465 9.8045823 9.9285825 0.2606279 TCGA-C8-A273 NA 0 NA 294 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 2 asian not hispanic or latino NA NA 1 1 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 9.7618213 9.5141071 12.1263937 8.8643431 8.1729545 8.7202877 10.3674309 10.1107887 10.6187262 14.6995728 10.5697331 10.8057427 1.5523771 11.8108162 2.4783765 9.4508182 5.9239264 8.0585763 10.9444706 12.4775514 3.0377863 14.8526633 1.9308887 10.0514244 11.1369547 8.6929422 1.0378039 8.1038842 10.2727831 0.8154115 7.4078592 7.3125889 -1.7695510 4.7222911 9.7182799 10.2655826 10.0790627 10.0272906 8.9291445 11.1509788 NA 10.7382345 15.1566084 7.1429403 10.5024864 11.6326525 10.2758582 2.6898806 3.2304336 9.0593696 11.6008548 NA 11.0027544 4.3801892 5.2857240 4.4003671 10.6122531 11.6431420 10.6073791 11.6658497 12.4232720 9.0649109 10.0996480 9.6495152 11.1602530 10.9957259 3.8451488 11.6538184 8.8396186 -1.7695510 10.6073791 8.8125817 1.9330816 5.0759305 10.8114050 10.0934646 9.8997678 9.5669464 1.5523771 8.6556556 12.7786597 10.3019022 9.7749213 9.4890058 -0.0096806 0.6634600 0.6640100 0.0195030 0.0278590 0.0210430 -0.0128510 0.0000000 -0.7002800 0.6041300 -0.0063668 0.6128100 -0.0040610 -0.0055572 0.0091705 -0.0057128 -0.0057128 -0.0008316 -0.0008316 0.0080567 0.6382800 -0.0179410 -0.0404800 -0.7281800 3.6569000 -0.0877120 -0.0877120 2.4315000 3.4088000 -0.0096806 -0.0096806 0.0133530 -0.6960400 0.0104240 0.0078737 0.0148880 0.0148880 0.0000000 -0.6991100 -0.7002800 0.6242400 0.6177000 -0.6357600 -0.6831400 -0.6831400 -0.0213730 -0.0213730 -0.0055572 -0.0055572 0.0091705 -0.0057128 -0.0057128 -0.0057128 -0.0008316 -0.0008316 -0.0008316 0.0016642 0.0040243 -0.0179410 -0.0235660 -0.0404800 -0.7281800 -0.6984800 -0.1009400 -0.0877120 -0.0145030 0.0069435 -0.0533410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 0.000 8.1433291 13.7257952 5.4202634 9.6339846 1.2554403 10.9800998 0.8154115 0.2304490 9.1522808 6.2965290 -0.7695510 8.1034069 0.5523771 10.9659958 8.9744327 1.0378039 8.9326125 8.9178154 6.7695985 11.2105794 9.7112097 7.7021152 10.4742089 1.9308887 8.7392250 9.9626073 3.5158386 2.5523771 11.4950290 3.2748282 12.8114050 13.1134171 7.6629816 9.4122133 9.6152235 9.8433084 2.6227664 0.8154115 -0.7695510 4.5879890 9.5708464 9.7026229 10.1780767 3.9583601 8.1860607 7.8616167 10.0617470 5.7461408 10.1973057 -0.7695510 9.4978117 1.6898806 3.3597179 10.2107008 6.4328091 3.5523648 10.0207883 7.6795885 10.4640595 -0.1845885 13.4177146 -0.7695510 11.4325636 NA 6.5702899 4.9169400 7.5835868 9.5071459 13.934995 6.815403 8.815402 11.810816 9.832211 10.552368 12.477551 12.495762 8.924798 10.132815 13.297118 9.484878 9.059370 8.472423 1.230449 9.415315 13.030329 10.883733 6.807869 9.111554 7.563595 8.042617 10.503664 5.631320 9.881940 10.569733 6.506564 2.230449 3.689869 9.292587 10.510050 10.162655 9.137330 9.983657 11.428117 4.800294 11.484583 10.079063 10.325507 10.129041 10.709715 9.770568 10.684225 9.400365 NA 9.295715 5.525060 11.002754 6.400365 10.657415 10.612253 7.525360 13.340026 10.546721 10.272783 11.452480 10.430725 9.308591 1.230449 TCGA-C8-A274 63 0 NA 290 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 3 2 NA NA 1 2 3 1 5 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.369646e-06 1.629947e-06 9.9102618 10.0639227 11.7009931 9.8771238 8.2266222 10.0530710 10.1486198 9.7860497 9.2186073 9.4288932 10.5055543 10.7011130 1.1458079 13.0058248 2.9531535 9.7175575 6.1956527 8.2319411 11.6072843 13.2694817 1.9531535 13.5090841 7.8617668 9.3996050 10.9822497 2.2332745 -1.8541269 9.1967895 10.1757822 0.4676968 7.6336448 7.0616844 -0.8541269 3.5381284 10.3439428 10.4524362 10.0901508 12.0566349 11.1458048 11.5324757 0.1457427 11.2637725 13.9889898 7.9863154 9.4461402 11.6432825 11.7143548 4.9271664 6.8358028 8.0780195 11.9188410 NA 11.1579055 3.4677360 5.1344879 3.7896562 10.1956533 12.3997262 10.4441538 11.4458713 13.3628537 9.2139113 10.6134104 10.1105970 11.7756168 10.7982017 5.4945340 12.1124905 10.6835086 -1.8541269 10.2942814 8.9523545 3.5449799 5.3842087 10.8914791 9.7910129 9.7572908 9.7142361 0.1457427 10.2760537 13.5828416 11.7866146 10.5954693 9.0284479 1.02640000 1.75600000 1.81660000 -0.49538000 0.00235810 0.00444110 0.00000000 -0.42615000 -0.00152430 -0.00360110 -0.00360110 -0.00498440 0.48544000 0.48992000 0.00805670 -0.00069303 -0.00069303 -0.51187000 0.01167900 -0.49193000 0.00223520 -0.06678800 0.00194180 0.00194180 0.00194180 -0.02931100 0.41814000 0.43885000 0.49575000 -0.50871000 -0.49527000 0.04288700 -0.49538000 0.00444110 0.00444110 0.00000000 0.00000000 -0.42615000 -0.00152430 -0.00152430 -0.57822000 -0.01050800 -0.00360110 0.00499690 0.00499690 0.00499690 0.00499690 0.48992000 0.48992000 0.00805670 -0.00069303 -0.00069303 -0.00207840 -0.45179000 0.01167900 0.00209840 -0.49193000 0.00277450 -0.49183000 -0.49600000 0.00194180 0.00194180 -0.48176000 -0.02931100 0.43885000 -0.01945200 0.01349200 -0.49611000 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 -0.495 1.793 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 -0.103 0.106 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 -0.495 1.793 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 -0.103 0.106 7.7968566 12.2717026 6.0223212 9.0076673 2.1458079 10.8891666 0.1457427 NA 8.6215384 7.4125910 -0.8541269 7.0706169 4.4677360 10.7744781 9.0963607 0.7307486 4.5381222 10.1559832 11.4105406 9.2879118 9.6204233 8.5604899 10.1472131 2.5381160 9.9877623 9.2272884 0.4676968 0.1457427 10.0609373 3.2332745 12.4500848 11.6939042 6.9139892 9.9081869 8.1130311 9.6975130 8.5295090 -0.2691644 0.9531535 6.5804335 8.4381265 8.5208442 10.8303343 1.1458079 9.2931051 7.9156428 10.4581206 6.6888364 9.4856548 NA 11.3581492 1.4677490 3.8462426 9.8214620 6.0582754 -0.2691644 9.0284479 6.2010869 3.7605190 NA 13.8289091 -0.8541269 9.9893333 NA 9.4917643 4.3157329 8.5197573 9.1619166 12.273477 6.421928 8.462086 13.005825 9.822643 11.838202 13.269482 12.237571 9.204473 10.219277 13.446837 8.544548 8.078019 10.082443 1.467749 6.978694 12.563921 11.2431786 8.4967439 8.7687719 9.4363997 8.9048607 10.6466542 5.9659828 7.4856546 10.5055543 3.7896562 3.3552559 9.1970137 8.1360222 9.4404255 10.6669145 7.4265759 7.5990752 12.7328791 2.8462526 12.0425251 10.0901508 10.2398825 9.8868504 11.6269736 8.7382619 10.8630528 9.5429446 10.1840380 9.5490405 1.8462325 11.1579055 7.2647457 10.3103975 10.1956533 7.3257138 13.4457283 9.8579019 10.4741992 12.9015791 10.8958837 9.9349309 0.7307486 TCGA-C8-A275 56 0 NA 1 breast stage iia t1 n1 m0 female 2010 NA NA infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 1 NA NA 2 6 1 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.843738e-06 1.040392e-06 10.1597021 9.8944396 11.8539633 9.3570705 7.9090818 9.3596571 9.9266331 10.7461481 10.6493106 13.7274939 11.2001328 11.0152244 2.2348998 17.4707730 2.4048214 9.0276799 5.5295118 8.6314943 5.4048146 12.8717408 NA 12.5940901 3.2348845 8.7522639 11.5635646 9.6394990 4.1656306 9.9559888 11.7132801 0.5567972 8.3551273 7.2461173 0.2348692 5.8642456 9.6464007 10.5599139 10.0203420 11.3432507 9.7803368 11.3185352 1.8198725 10.1938048 14.4898260 7.0562486 8.6336332 11.7291202 10.4848919 3.3223464 2.0422591 9.0374061 11.5044547 0.2348692 11.0158394 5.5110125 7.4321067 5.9422494 8.9196383 12.0331589 9.8578566 11.4735929 12.7700435 5.7584524 10.4290309 9.5415210 11.3694764 11.5780753 4.8348022 12.6292853 10.3355519 NA 9.8899731 9.7065649 2.0473988 6.2235751 10.6996906 10.6713410 9.3564231 10.4732944 2.6272099 9.8080634 13.0032808 11.6894460 9.6861008 9.1190602 -0.01165200 0.44037000 -0.01464100 0.04329900 0.04329900 0.00597000 -0.00069303 -0.00650500 -0.00138580 -0.00719580 -0.00719580 1.75520000 0.00000000 0.00000000 -0.00851710 -0.00851710 -0.00851710 -0.00387790 -0.00387790 0.68347000 0.00319100 0.00527490 -0.01931400 3.65690000 2.60760000 -0.07361000 -0.48386000 0.29660000 -0.01257600 -0.02753500 -0.01165200 0.00499690 0.04329900 -0.48208000 0.00597000 -0.00069303 -0.00069303 -0.00650500 -0.48008000 -0.01019300 -0.00664320 -0.01477800 -0.00719580 0.00110930 -0.00581400 0.45105000 0.45105000 0.00000000 0.00000000 -0.00851710 -0.00851710 -0.00672600 -0.00470790 -0.00387790 -0.46547000 -0.01023200 0.24218000 0.00319100 0.00513590 0.00110930 -0.01931400 -0.50370000 -0.47162000 -0.07361000 1.50550000 -0.01257600 -0.00180140 -0.01876500 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.000 0.450 0.181 0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.000 0.450 0.181 0.181 9.3525328 12.2161893 3.4048214 8.3947611 6.2348902 11.2572575 3.3223464 2.6943231 8.7952224 8.6368359 NA 7.5769642 5.0030760 11.2779169 8.9611079 2.8198521 8.9695992 9.7070728 11.7459010 10.1217293 8.2055709 8.0788105 10.2593368 3.3223464 8.3381775 9.5995715 1.8198725 NA 12.4706047 1.6943008 12.8065830 12.4499676 7.9611076 9.6840383 9.4498158 11.5962852 4.5747373 2.8787450 0.5567972 4.6778352 8.2710633 8.6902170 11.5627230 2.5568218 7.6345519 6.7307446 10.1626676 6.1715271 9.9956096 -0.7651308 8.8123185 3.5202965 3.5202965 9.3986400 5.6060128 7.7990394 9.2398124 8.7613890 9.4351752 4.2121724 13.7077708 2.4048214 10.4896230 NA 9.3922365 3.2792781 8.3808216 8.4048146 9.977199 7.092870 8.539811 17.470773 10.736976 10.331605 12.871741 9.209304 9.045461 10.896890 13.319449 8.813262 9.037406 9.131979 -1.765131 8.883247 11.609929 11.501237 5.758452 8.656954 9.207152 8.570280 11.134551 7.572512 8.268313 11.200133 8.875135 1.694301 6.983083 8.800201 12.239812 11.269861 7.268313 9.750097 10.118297 8.291527 11.281142 10.020342 10.380185 9.717194 11.310536 10.045060 10.969599 9.025238 -1.765131 9.527470 8.535242 11.015839 6.979724 11.527355 8.919638 7.902001 13.476240 10.804983 10.646930 12.199321 11.699691 9.881898 3.661157 TCGA-C8-A278 61 0 NA 289 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 4 NA NA 2 6 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 10.011656924 9.618584639 11.109055046 9.142517848 8.752425139 10.277242875 9.344778353 10.231327038 9.840802938 13.226884062 9.505747455 10.329213538 2.732269200 15.985269040 3.802668866 8.692280374 5.560097398 8.983997410 9.325482886 12.558509133 -1.589441802 12.017102541 1.995303605 9.509698217 10.658277902 4.191712660 -0.004624027 12.171797692 12.104817074 0.732312621 7.904205889 7.991550756 NA 7.484491832 9.278401135 10.738183650 9.304410192 10.494494316 10.214884794 10.969966433 9.885577110 10.385123396 14.160978841 7.321322938 9.020452474 10.939536829 10.320243441 3.658280045 3.165236648 8.986834693 12.056571539 0.410341105 11.073018722 5.068563335 7.817618142 5.476440016 10.402934666 11.935871156 9.848622471 12.172940018 12.782467213 6.497813524 10.716696874 9.807190516 10.998362232 10.764324175 3.539630325 11.948660559 8.235309181 NA 10.039706908 9.982576815 2.322995294 6.487166351 11.093783639 10.159800840 9.863106351 10.224131583 2.497816717 10.067668830 12.634125834 12.514375701 9.033317273 8.797290592 0.0000000 0.0000000 -0.1671400 0.2283900 0.2664400 -0.2675700 -0.1380700 0.0179630 0.4355800 -0.4065000 0.4324300 0.5788000 0.0284810 0.0308730 -0.2039800 0.1580100 0.1580100 -0.1023600 0.1241700 -0.2098300 -0.0346310 -0.1398700 -0.3471000 3.6569000 0.9473100 0.0144700 -0.1514400 -0.1514400 0.2649800 -0.1593700 0.0000000 0.0072217 -0.0083005 -0.2675700 -0.2675700 -0.1380700 -0.1380700 0.0179630 0.0179630 0.0036076 0.0290440 0.0290440 -0.4104700 0.0254120 0.0254120 0.0254120 0.0738330 0.0308730 0.0308730 -0.2039800 0.1580100 0.1580100 0.1580100 -0.1023600 0.1241700 -0.3128400 -0.2148600 -0.0346310 -0.1398700 -0.3441200 -0.3471000 -0.3421700 -0.2336100 0.0097276 -0.1514400 0.2649800 0.2265300 -0.0219210 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 -0.117 0.000 9.574000056 12.699504698 2.410341105 8.566433505 5.931635786 10.813362348 1.217727042 -0.004624027 8.657090816 10.292993354 -1.589441802 7.666983770 3.836610908 11.430462170 9.086307427 3.619800338 8.442396163 9.303651996 8.938804476 11.702672000 9.280298918 6.999065327 10.815225808 2.658280045 5.619803272 9.640370760 6.658277188 NA 9.804277058 0.995303605 13.142146667 12.786950581 8.915169207 10.261318542 10.611861668 9.556282448 6.524091892 3.580278168 -1.589441802 6.243240641 8.658277902 8.804813155 9.912684890 2.497816717 9.159691745 6.806955549 9.766802349 6.280715102 9.034231950 -1.589441802 9.838710573 3.497816717 3.869782592 9.859937567 6.803741086 9.605107221 8.963979788 9.036971958 10.310084909 2.497816717 13.597547748 -1.589441802 9.907204197 NA 9.928019675 4.110789173 8.466987993 8.853293959 11.364539 7.246400 8.716412 15.985269 9.874386 10.615533 12.558509 9.201513 9.523585 10.184726 13.012759 10.202327 8.986835 7.995313 1.217727 9.557555 10.995782 11.0683386 5.4666075 9.1425178 8.4354898 8.3262299 10.7035519 7.0139769 7.6818133 9.5057475 6.3351634 0.7323126 6.3818942 7.4956368 10.6267931 10.2975710 8.8748962 7.7962129 9.1280268 9.7175512 10.9214037 9.3044102 10.7364989 10.4430849 10.8924020 8.7401467 10.6415715 9.1710702 7.3990352 9.5783768 10.2998543 11.0730187 7.9745001 11.1120900 10.4029347 7.2464005 13.7125462 10.6588710 11.2078092 11.9862441 11.0007035 9.3557942 5.9260492 TCGA-C8-A27A 48 0 NA 747 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 11.2711502 10.4377865 11.4422797 9.8234075 8.8641620 9.4712783 9.6655390 11.2850480 9.0958669 13.6762088 10.6092990 11.2371781 0.3476657 11.8183330 3.9083902 7.6312258 6.5414451 8.9423720 4.5803324 13.1054808 -0.9742624 14.0336712 0.3476657 8.9733831 11.5639350 8.6349246 3.3833034 6.9114423 9.5750494 3.8331026 7.9190474 7.8586363 0.6107001 4.6107060 9.5784152 9.8774950 9.6210035 9.2100016 10.0908255 11.8233063 11.9427451 11.0442940 13.6601033 9.0007485 9.4764418 10.9880998 12.1596107 7.2400653 6.3744744 9.3772374 10.1283780 -0.3892999 10.5714345 9.1900244 5.0918352 4.0481141 11.6199540 12.2878409 9.5998665 10.8615990 12.8951471 8.2689200 11.4707609 11.0139354 11.3589014 11.1614554 4.9446102 12.3930925 11.9555592 0.3476657 10.0257460 9.1881373 3.7286824 3.9326376 11.0935165 11.0294396 10.6616908 10.4367273 0.8330925 7.3318073 11.0956992 10.4756685 10.2515560 8.8111984 -0.336220 0.073356 0.073356 0.082141 -0.030908 0.025766 -0.424640 -0.374530 -0.376990 3.656900 3.656900 3.656900 0.059605 -0.754320 0.854760 -0.179240 1.262000 -0.642670 -0.310480 0.026609 0.104490 1.565900 -0.693350 0.966720 0.846850 -0.676840 -0.676840 -0.676840 0.443020 -0.240500 -0.336220 -0.305260 0.012004 0.019219 0.030827 -0.755500 -0.737250 -0.360150 -0.376990 -0.378710 0.056181 0.066469 -0.810320 -0.398120 -0.016714 0.035503 0.129430 -0.754320 -0.925800 -0.718200 -0.562890 -0.275390 -0.275390 -0.742230 -0.307370 -0.331460 0.026609 0.104490 1.469800 0.031389 -0.732500 0.195830 -0.118770 -0.623630 -0.676840 0.059319 0.143800 -0.843660 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 0.000 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 0.000 7.19817391 10.98085104 7.02574642 8.89225228 3.03920860 11.61808629 -0.97426244 NA 9.07967198 8.50754532 -0.97426244 7.42235075 -1.97426244 10.68082944 8.75960860 -1.97426244 6.92661267 10.92529176 8.03557443 8.97338311 9.63466151 7.28313374 11.47399142 0.34766566 10.44649580 9.02645041 2.11320040 -0.97426244 11.64848427 7.24249199 11.95740695 11.91999541 7.82987683 10.37696135 11.13525024 8.89379691 7.59749840 2.54929952 -0.97426244 0.02573756 7.50350457 7.64229507 9.60411878 4.82016364 8.36400330 5.92661386 10.28901529 6.47695677 10.31114830 -0.97426244 7.73655279 2.93262816 6.16017195 10.09802945 7.54016447 6.21556989 7.89765127 6.98284759 6.90532924 NA 12.97461513 0.34766566 11.08441432 NA 9.63307641 6.92661267 8.57553055 8.95278317 13.429363 5.443600 9.408910 11.818333 10.493150 10.818740 13.105481 13.081071 9.694631 10.286078 12.306734 12.450044 9.377237 8.503504 1.195663 8.125094 11.727269 11.0142533 7.6200710 8.6153972 9.5658742 10.3986111 11.1552303 4.5335384 11.3374944 10.6092990 7.6088285 1.6107001 6.7570646 10.3382916 10.8540809 10.0080266 9.6848499 9.4367274 11.2690688 6.4892700 11.8617776 9.6210035 10.6312255 9.7922749 11.5411995 9.0715058 10.8122199 9.7030252 -0.9742624 9.0516815 6.8899322 10.5714345 6.1754927 11.2033213 11.6199540 7.5316965 13.4787916 10.3810971 10.6144607 11.8652451 9.4430712 10.1834087 2.4180550 TCGA-C8-A27B 48 0 NA 439 breast stage iib t3 n0 m0 female 2011 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.572012e-06 8.669932e-07 10.5488626 9.3308210 11.3948750 10.2941002 8.8920018 9.3993433 8.5420591 11.0235478 11.5050929 13.1605578 9.7435173 11.1023975 -0.9376019 10.0172023 3.9449240 10.0106461 4.4716687 8.0929463 9.0040603 8.1430964 -1.9378783 9.8341811 5.5700743 9.1902734 10.9671017 8.9303299 5.0846468 10.5963386 12.1631055 0.3841604 8.7267263 8.6091736 -0.9376019 4.8304632 9.8684258 10.3340338 9.0984525 10.8469139 9.8864422 11.3825154 0.3841604 7.8840527 14.1148683 7.4902412 9.4427401 11.0652698 10.4405739 3.2717394 NA 9.5931730 11.0422400 NA 10.8981320 6.5052224 7.9046292 4.7627209 8.9349537 12.4515742 9.9963383 11.1317288 13.3213969 4.4021287 11.4140464 9.8953350 12.1868042 11.4028245 4.2910952 12.3223899 8.7007151 1.0622599 9.5155496 9.5873102 3.2744555 4.9811403 12.1995904 10.5638674 10.9544423 10.4449030 NA 3.3842018 12.6475937 12.0475873 9.9132471 9.0359763 0.4807900 0.4807900 1.3919000 -0.3795400 0.4307500 -0.3623300 0.6997000 0.0000000 0.1068700 0.0428740 0.4209900 2.0036000 0.4238500 0.0486880 0.4223400 0.0280600 0.0420240 -0.4018500 0.0652260 0.1083300 -0.3457200 0.0553730 -0.3911800 -0.3911800 -0.3911800 0.3813800 0.3660800 -0.3969700 -0.3946400 -0.4024100 0.4807900 0.0629370 -0.3753800 -0.3742600 -0.8057500 -0.3825700 -0.3773000 -0.4028500 -0.3541900 -0.3735400 -0.3683900 -0.3458400 -0.8364800 2.0733000 -0.3926100 0.4120900 -0.3864900 -0.3722300 -0.0041546 0.0424490 -0.3628300 -0.8463600 -0.8463600 -0.7941900 0.0391630 -0.0030475 -0.3692900 -0.3699700 -0.0380340 0.3210900 -0.3911800 -0.3911800 -0.8099700 0.0277780 -0.3969700 0.0210370 -0.3552100 0.4571700 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 0.000 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 0.000 8.1576759 13.4029984 -0.9376019 8.9922770 4.4198287 11.8057460 1.2322310 6.5936600 8.9563387 7.4459832 NA 7.9027266 4.1708064 10.6916356 9.4647581 2.2322002 8.0495431 11.4670214 5.6621913 8.4318761 8.6138624 6.5134907 10.0787391 3.6769895 8.3568996 9.9077690 5.8501818 NA 9.4099002 3.8436422 11.7575073 12.1005979 7.6806647 10.1912399 10.4206555 9.9844917 1.2322310 2.4545971 NA 2.1497471 7.8354182 7.4927313 7.4885439 -0.9376019 7.7798014 5.8304632 10.0463414 4.7061327 10.7110859 3.3842018 11.7898804 2.3842156 3.2717394 10.0719606 6.7418296 6.5975550 10.2539551 9.1622843 8.0179291 4.2120245 13.3265383 1.2322310 10.6233282 NA 8.3196667 4.9570974 9.4626248 9.5917095 10.378843 8.591710 7.887238 10.017202 10.187692 11.813509 8.143096 12.117138 9.266239 10.292299 13.642302 11.877662 9.593173 7.802059 2.384216 8.631185 11.397948 10.086033 9.964277 9.832943 9.837889 9.594148 10.294490 6.609173 4.454597 9.743517 9.213930 NA 9.288089 10.079317 12.051052 10.785513 8.529885 7.798681 9.527335 7.647242 9.847163 9.098452 10.451372 9.049543 11.737905 11.065797 10.440845 8.079087 NA 8.244798 8.112128 10.898132 4.720492 10.165560 8.934954 8.125674 14.481383 9.963523 9.914028 12.600953 11.010829 8.938028 1.869635 TCGA-C8-A3M7 60 1 1034 1 breast stage iiib t4b n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.780091e-06 1.28315e-06 10.6122131 9.9957635 11.0084562 8.8769601 8.2532240 9.1726768 10.2590296 9.3593633 11.0040841 10.0054661 10.8212823 10.5472716 1.8515592 12.2361563 3.2990248 9.5342441 6.1800404 8.9244931 7.9038897 12.7488642 -1.6077925 11.9781559 6.2686533 9.1652764 10.7078528 5.9467262 -0.6077925 9.3441503 9.2671184 3.7140696 8.8719172 7.5058790 NA 7.5595553 10.1549344 10.4514816 9.1553495 10.8939743 10.6430277 11.7321262 12.0974455 10.3466970 14.6064752 7.1030129 11.0731559 10.7964804 10.1536883 5.5520081 6.1403308 8.9770996 11.8613973 -0.0228300 11.2429099 5.0068456 6.0856244 2.5620592 10.5016413 11.9297195 10.3618834 11.5757725 12.8031184 6.5819613 10.6119106 10.5214201 11.3390434 11.0788564 4.5006619 11.4637671 10.6821559 NA 9.9205912 9.1792234 4.7525024 4.9920478 10.1763629 10.2293708 9.6624325 9.7513375 4.3921388 9.8412857 13.6087693 12.3379467 9.6251576 9.7392048 -0.1405200 0.3327000 0.6790100 0.0027745 0.0027745 -0.0290380 0.0073609 -0.0465830 -0.0465830 -0.0020784 -0.0020784 0.0061090 0.0181030 0.0216030 -0.0184900 -0.0162920 -0.0162920 0.0188030 0.0188030 0.0000000 0.0235660 -0.0700010 -0.3492700 -0.3492700 -0.3492700 0.0479780 0.0363220 0.0363220 0.0269350 -0.1405200 -0.1405200 -0.1343200 0.0027745 -0.0073339 -0.0323010 0.0073609 0.0073609 -0.0465830 -0.0465830 -0.0465830 0.3023400 0.3082600 -0.0020784 0.0045800 0.0045800 0.0045800 0.0193630 0.0216030 0.0308730 -0.0184900 -0.3546400 0.0283410 -0.0091286 0.0188030 0.0188030 0.0188030 0.0045800 0.0235660 -0.0700010 -0.3522500 -0.3492700 -0.3492700 -0.3713200 0.0479780 0.0363220 0.0269350 -0.0117490 0.0310140 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 8.8779663 11.7254323 1.3921525 10.0382458 3.8515692 11.2657734 1.1994996 -0.6077925 8.8556615 8.0873652 NA 9.2419019 2.5620592 9.6884797 9.8062938 2.0925796 10.3579214 10.0137312 11.0452061 9.3794011 9.6787700 8.2975239 12.5198091 2.1994996 9.2914940 9.9322651 5.6682610 1.5620836 10.3269337 4.9619937 13.3355219 11.8892405 10.5058792 10.6137242 9.0205828 9.0068470 4.7671781 -0.6077925 1.9770967 0.7140476 8.2793575 10.3199150 10.7030339 7.9274124 9.7107252 7.7118094 9.7709739 5.9994679 9.2655813 0.7140476 10.7595518 1.7140476 5.9078377 9.9963798 5.9283466 7.4927994 9.6173446 9.9925147 9.7061537 2.1994996 14.1612001 1.3921525 10.0685350 -1.6077925 8.5342441 7.8099893 8.2532240 9.2099202 11.522852 6.099497 9.014189 12.236156 10.687430 11.389846 12.748864 9.741971 8.999467 10.473953 13.114091 9.467616 8.977100 7.640065 1.392153 7.380822 12.033060 10.822067 7.372277 9.109813 9.118355 7.628151 10.323569 6.557044 7.784454 10.821282 6.644802 3.392139 8.619753 6.591368 11.703460 10.570802 7.782306 8.849518 10.737542 7.754081 11.952575 9.155350 10.472288 8.892979 11.445384 10.655700 10.449113 8.530409 9.557044 9.987465 8.452833 11.242910 5.977099 10.736988 10.501641 6.912049 14.316807 9.984594 10.648346 11.978156 10.510754 9.800998 3.562059 TCGA-C8-A3M8 68 0 NA 394 breast stage ia t1c n0 m0 female 2011 NA no infiltrating lobular carcinoma NA asian not hispanic or latino NA NA 1 2 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1.144431e-06 2.080784e-07 10.24158603 9.92203918 11.41855539 9.17392693 9.20620047 8.31831684 10.88101199 9.57187909 9.97994916 14.54991299 11.62558708 10.63686629 1.09308686 14.20591540 4.02384970 8.83457629 5.28293273 8.50037704 9.01940531 13.46672228 0.41500143 14.64570346 2.09312068 9.43468389 10.94641894 8.76906655 0.41500143 8.16050326 7.61862997 3.00000000 7.13202874 6.68556597 -1.90671027 5.32192809 10.05672807 9.72837412 9.62692585 9.82739558 10.15987134 10.87426420 2.00000000 11.27627954 14.92598706 8.51230077 10.03488698 10.82506475 11.51648798 4.64770017 7.12377689 10.03415696 9.77960988 0.09315449 10.44128427 3.84799691 3.95109351 3.84799691 9.72155500 11.66628317 10.39603390 12.72638848 12.67865883 9.00824176 10.93172242 10.46405834 11.00805508 10.60856283 4.55254307 12.39016896 12.42668408 -0.90698077 10.31861816 8.95806922 3.84932878 4.09311222 9.98641094 9.66580969 10.18817675 10.02937931 2.48542683 7.22496637 12.45347642 10.15448055 8.12515513 9.57843553 -0.01243800 1.01360000 1.13720000 -0.00470790 1.15640000 0.00110930 0.11800000 -0.01285100 -0.00475610 0.56028000 0.56028000 -0.01436600 0.00055459 0.03045100 0.00791750 1.75760000 -0.63708000 -0.00816240 -0.00816240 -0.64038000 -0.00026319 0.00000000 -0.04428000 0.55968000 0.55968000 -0.02753500 -0.02753500 -0.02835500 0.61426000 -0.02917500 -0.01243800 -0.00083160 -0.65463000 0.00110930 0.00110930 0.07757400 0.07757400 -0.66624000 -0.00475610 -0.00475610 -0.00733390 -0.00180140 -0.64874000 0.00583090 0.00583090 0.00583090 0.00583090 -0.64170000 -0.64170000 0.00791750 -0.67085000 -0.64208000 -0.64208000 -0.00816240 -0.00816240 -0.00816240 -0.64038000 -0.00026319 0.00000000 -0.64668000 -0.65435000 0.55968000 0.00861350 -0.02753500 -0.02753500 0.61426000 -0.00124730 -0.00138580 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 7.54432077 13.19946787 4.11547444 9.82145512 3.02809171 12.06132620 1.79356299 0.41500143 8.66864853 7.35049725 -0.32192809 7.60880924 4.55254307 10.86439255 9.23840474 5.41503863 7.84799691 10.54174200 10.46597446 10.52695565 10.46941929 8.20294022 11.80960737 2.18056164 8.08179391 10.05311134 3.51937835 0.67807191 11.29508013 4.20163386 11.28030681 12.05582470 8.04875931 10.23330007 7.98792736 9.58846486 3.61667528 3.09310377 0.09315449 3.70782293 9.26678654 9.45560114 11.25707352 5.45066031 11.24024438 7.73696537 9.67713240 6.37387959 10.02901109 NA 10.88935185 0.90049009 9.03268853 9.25354804 7.33545021 1.90045145 8.67994908 8.66486217 3.87447240 -1.90671027 13.04097460 2.26303441 10.83752284 NA 6.76906688 6.98185265 7.91806834 8.26803524 15.173563 6.761994 8.746850 14.205915 9.446256 11.006747 13.466722 13.921791 8.042936 10.455053 12.891125 10.349023 10.034157 8.517276 1.093087 7.951091 12.075479 11.4696418 6.4105226 8.7952822 9.0596149 9.5277376 10.6693929 5.7004397 7.5401924 11.6255871 7.8004683 -1.9067103 6.4059924 7.6548938 10.6698300 9.3923174 8.0675242 9.3645724 11.7517672 3.4150420 10.7381733 9.6269259 10.7531053 9.1685886 11.3864374 10.6532034 11.0015020 8.6695938 NA 9.1050565 3.7935526 10.4412843 6.2120498 10.8276073 9.7215550 7.7926816 12.8012772 10.2396781 9.6186302 12.3059097 10.6102867 10.4629794 0.6780719 TCGA-C8-A8HP 59 0 NA 396 breast stage iiia t2 n2 m0 female 2013 NA no metaplastic carcinoma 6 asian not hispanic or latino NA NA 2 4 NA NA 2 6 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.864338 8.552718 11.035725 8.036142 7.971253 9.563185 9.956330 10.416323 10.568967 14.198394 10.322229 10.895044 1.281253 17.522610 2.603193 10.608807 4.235451 8.005769 5.347343 11.981695 NA 11.848022 7.120459 10.061590 10.568390 9.098238 5.471080 13.127841 11.138847 NA 7.139236 6.176073 NA 6.740686 9.262822 9.806776 9.007473 9.940359 9.307778 10.390433 12.175125 7.906964 14.497622 6.334366 9.884863 9.687460 9.375333 4.235451 3.673568 7.686396 10.105418 NA 9.986023 4.835843 7.607685 6.400196 10.026089 11.086192 10.118883 10.949697 12.728596 8.206067 10.682134 9.798924 10.676253 10.143892 3.088617 11.566946 10.027769 2.740690 10.387163 8.009175 4.245191 5.211993 8.552718 9.427187 9.873712 8.759013 2.451172 8.732466 12.798186 11.732724 8.978222 9.613291 -0.0435000 -0.0435000 0.1890400 -0.1628100 0.1231700 -0.1570700 0.0272160 -0.0113350 0.4159700 0.1293300 -0.0590210 0.0698390 0.0950110 1.8912000 -0.1178300 -0.1178300 -0.1178300 0.0544210 0.0544210 0.0000000 -0.1619200 -0.1874800 -0.1872200 3.6569000 0.1640000 -0.1928700 0.0029133 0.0857990 1.6655000 -0.0435000 -0.0435000 0.1096800 -0.1628100 -0.0392580 -0.1635800 0.0272160 0.0272160 -0.0113350 -0.0113350 -0.1775200 0.0898510 0.0898510 -0.3256500 -0.1733500 -0.1733500 0.2925100 0.2925100 -0.1733500 -0.1733500 -0.0363410 -0.1178300 -0.1178300 -0.1178300 0.0544210 0.1068700 0.1068700 0.0000000 -0.1809300 0.8518500 0.3112900 -0.1872200 -0.1840700 0.0910100 -0.1455400 -0.1924900 -0.0602110 -0.2667300 -0.1840800 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.164 -0.164 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.119 0.293 0.000 0.000 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.164 -0.164 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.119 0.293 0.000 0.000 9.1821217 12.8305582 5.3897802 9.1546989 6.2526825 12.0829632 4.3256455 3.4511847 9.2994551 8.8028553 0.2813125 7.0434047 3.0886165 10.9309601 9.0176567 3.7406901 8.5781711 8.3091607 9.8377608 10.0853859 9.6172480 7.3580701 11.7743597 1.8662354 6.8811678 9.8339239 7.6388066 NA 11.6473038 -0.7188062 12.1326134 12.6952793 7.6388066 9.2741932 9.1971341 12.7388922 4.2354514 3.0886165 -0.7188062 4.6735734 8.4182460 10.0151176 9.6660386 5.2585340 9.7572922 10.3098516 9.8978037 5.9536796 8.6842668 0.8662354 9.0159644 2.2812531 5.0886081 9.2925660 7.5143953 8.4882692 9.7969546 9.0853859 11.2945775 3.6735677 13.6160867 -0.7188062 11.5941378 NA 8.5503816 4.5291838 7.5758758 9.2281612 10.808527 8.618877 9.029448 17.522610 10.320983 11.366063 11.981695 9.524429 8.578171 10.055218 12.507065 8.151619 7.686396 8.418246 2.981688 7.336537 11.991846 11.936115 4.866216 8.828149 9.436073 8.194144 11.645006 8.029448 10.076483 10.322229 7.707519 NA 9.991200 9.457989 10.223036 11.210513 6.325649 10.313989 6.946591 8.835844 11.217907 9.007473 10.160838 10.151620 10.277728 10.671961 11.411825 7.603183 3.281253 9.866386 9.438602 9.986023 6.441127 11.755468 10.026089 7.420806 13.253963 10.502238 9.966880 11.746311 11.434490 10.197134 3.451185 TCGA-C8-A8HQ 53 0 NA 380 breast stage iib t2 n1 m0 female 2013 NA no mucinous carcinoma 3 asian not hispanic or latino NA NA 1 1 NA NA 1 2 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.78531154 9.38727464 11.20457114 8.34964349 8.61369408 9.11679204 10.12081886 10.27492030 11.26626148 13.92401898 11.27792862 10.49840217 1.63384966 12.96640601 2.71186930 10.34620799 5.54076195 8.43692679 7.51107107 12.22695193 0.02955890 11.71779460 5.57247135 9.64168438 10.81709390 7.06385990 2.16440014 10.22008637 9.92030149 0.78584346 8.55405964 6.80379661 -1.53616832 4.37084082 9.57703808 10.30904507 8.81046078 11.62712500 9.69756673 10.92619376 8.89335372 10.12305105 15.22339321 7.60434269 9.38725224 10.32231667 10.87519328 5.04890750 6.90689060 8.50834110 10.13283206 1.04893365 10.99117970 4.74935191 6.72604237 5.09330241 10.46147945 12.10735238 10.57410416 12.47263832 12.88515724 9.01565534 11.22923323 10.76550615 11.12527985 10.27933037 4.27129867 11.60557531 12.09148097 0.04893365 10.44337230 8.80935238 4.16466562 4.85626366 10.88837583 10.24571657 10.23584922 9.63136516 2.71186930 9.43261393 13.56066225 11.81032231 9.73014794 10.21549114 -0.5978000 0.6224100 0.6062900 0.0414520 0.0084686 -0.0216520 0.0112550 0.0225070 0.0000000 -0.5807800 -0.5807800 0.0126490 0.0180980 0.0196220 0.0262270 0.6298800 -0.5979900 -0.0158850 -0.0101000 -0.0041602 0.0341070 0.0310080 -0.5742700 0.0474600 0.0474600 -0.1967500 -0.1967500 -0.1967500 -0.2455800 -0.5704200 -0.5978000 0.0243740 -0.6040000 -0.0290440 -0.0216520 -0.0069252 -0.0069252 0.0231400 0.0000000 0.0134710 0.0106900 0.0127890 -0.6258800 -0.0035800 -0.0035800 -0.0035800 0.0206840 0.0196220 -0.5965300 0.0262270 -0.6131700 -0.6039500 -0.6039500 -0.0158850 -0.0101000 -0.0101000 -0.0041602 0.0341070 0.0310080 -0.5826800 -0.5742700 0.0474600 0.0263680 -0.1967500 -0.1967500 -0.2455800 -0.6309300 0.0746900 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.568 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.032 -0.366 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.568 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.032 -0.366 9.30393825 14.70078349 5.94776199 10.30786814 5.06386098 11.06919511 3.27130614 NA 8.01853570 10.04137592 -0.53595913 7.75348219 5.20541597 10.92670495 9.40132093 2.37083385 8.41959704 8.99044637 10.13858079 11.31998349 9.52552081 7.08965598 11.21109113 2.46393628 8.60093835 10.27973059 4.16438404 -1.53616832 11.26363347 3.41814946 12.08038109 11.78404247 8.91206329 10.04890954 8.90273898 9.96030159 4.83898705 2.16440014 0.04893365 1.92337741 8.83898642 9.89283072 10.11140553 3.16438404 8.85330956 8.20541402 10.07127746 6.01084249 9.63324574 -1.53616832 10.12438875 3.32192809 3.59323424 8.88897424 7.26740002 6.65377230 9.37833214 8.43117330 9.67096140 1.46393628 13.60369828 1.04893365 10.44907744 0.78584346 8.20372778 4.41814271 8.04326302 9.56329486 13.523226 6.781360 8.690359 12.966406 10.460774 10.866959 12.226952 12.803797 8.489086 10.269691 13.200613 9.968766 8.508341 10.336237 3.048916 7.463947 12.087028 11.430453 6.277728 8.517873 9.148696 8.836812 10.354515 7.673400 5.963793 11.277929 7.508341 2.271306 9.262419 7.732770 10.445158 9.946251 8.369334 9.498058 9.762583 6.923379 12.960662 8.810461 10.626653 9.565923 11.067110 10.551741 10.555052 8.212140 NA 9.631309 7.735410 10.991180 6.939680 10.578991 10.461479 7.202343 12.964789 9.776830 9.898575 12.242435 11.442836 9.738325 2.987503 TCGA-C8-A8HR 49 0 NA 408 breast stage iiia t3 n2 m0 female 2013 NA no infiltrating lobular carcinoma 5 asian not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1715948 9.2061262 11.4319418 8.3834961 8.5690517 9.0425847 10.0245584 10.0803044 11.4498384 12.0752052 10.8122584 10.2445301 0.3891262 12.4818996 2.2636054 10.0768097 6.4408044 8.7050469 8.8969372 11.5061362 2.8916525 13.0043123 5.5590665 9.7180268 10.5611532 5.6989991 0.3891262 9.7147852 10.8489156 3.6621599 8.8403537 7.5490137 0.8042188 5.1440300 9.6989977 9.9482009 8.9347506 9.9353939 9.3050218 10.8195951 4.3277448 9.5855397 14.8474636 8.0567271 9.7942839 10.9539271 10.6307284 5.3277412 6.1261077 8.7540066 10.9772324 NA 10.8320859 7.4766053 6.5252796 4.8265485 10.1085313 11.8162807 10.1294855 11.9339459 12.5642761 8.2135709 10.7286214 10.3451458 11.0154599 10.9731654 4.5590696 11.3032784 11.5787611 1.1261139 10.4690716 9.1418019 4.0167459 5.8702685 9.9778572 9.4597107 10.6311257 9.4133586 4.0895829 8.4059507 13.5318346 12.6533896 9.6211636 9.7750049 0.1510200 0.1510200 0.1510200 -0.0473130 0.0819250 -0.0447970 0.0721350 -0.1174100 -0.1174100 0.1083600 0.1083600 0.2574900 0.0188280 0.0188280 0.1152400 0.0163180 0.0163180 0.0108680 0.0198080 -0.1844400 -0.0609930 -0.0291500 0.0303360 0.0303360 0.0303360 -0.0014992 -0.0014992 -0.0201420 0.1605800 0.0000000 0.1510200 0.0121230 -0.0473130 -0.0798580 -0.1637400 -0.1911400 -0.1911400 -0.1174100 -0.1174100 -0.1953500 0.0518630 0.0518630 -0.1963400 -0.1107400 -0.1107400 -0.1107400 -0.1107400 0.0188280 0.0188280 0.1152400 0.0163180 0.0188280 0.0188280 0.0198080 0.0198080 0.0198080 -0.1919700 -0.0609930 0.1006200 -0.0948320 0.0303360 0.0303360 -0.0450680 -0.1875800 -0.0201420 0.1605800 -0.1942200 -0.0111730 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 -0.124 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 -0.124 9.3985045 13.8062038 8.1261082 10.7634575 4.6584229 10.8614948 4.6370711 3.3277448 9.1056762 9.0580275 NA 8.7140731 6.1705020 10.0491383 9.7518168 4.9539264 11.3827885 9.7518168 10.2538445 10.0574366 9.4578938 7.2007849 12.0127192 4.1261056 7.6868233 10.3496271 4.5046204 NA 11.2597641 5.4040925 12.8143584 11.8129587 8.9615270 9.5227129 10.6179612 9.3423690 5.5985945 2.8916525 0.3891262 3.1261139 9.1261082 9.6806969 10.1215926 6.5855395 8.7934326 8.4096595 9.8369145 6.4976666 10.0750592 0.3891262 11.6000167 2.7110764 5.1617305 9.2713678 7.4014504 5.5590665 9.9392479 9.2272958 6.9640509 2.8916525 13.4533239 3.5046204 10.5089482 NA 7.6275470 7.4115101 8.4298887 8.8662261 12.876230 6.462391 8.487174 12.481900 9.925066 10.423024 11.506136 10.797472 9.004588 10.409660 13.191861 11.382553 8.754007 7.562403 1.389126 8.075643 10.861495 11.475721 5.838044 8.929593 9.386322 8.557397 10.156428 7.899577 8.822380 10.812258 7.292020 1.804177 8.255391 7.539837 11.314697 10.723416 9.095351 9.898258 9.512402 7.255391 11.200670 8.934751 11.041987 10.257451 10.572778 10.909761 10.570295 8.669913 2.891652 9.812714 6.886329 10.832086 7.339455 11.175856 10.108531 7.213571 13.810068 10.034200 10.274330 12.112235 10.487613 9.586359 1.611550 TCGA-C8-A9FZ 49 0 NA 592 breast stage iib t2 n1 m0 female 2013 NA yes mixed histology (please specify) 3 white not hispanic or latino NA NA 1 1 NA NA NA NA 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0751280 0.0160450 0.0346770 0.0284810 0.0596510 0.0806010 -0.8949600 0.0577960 -0.9088100 3.6569000 0.8998900 -0.9847000 0.0066369 -0.0071845 -0.0150540 -0.0150540 -0.0121620 0.0315770 0.0315770 0.0454240 0.0478360 -0.0284910 -0.9750900 0.7617200 0.8492900 -0.1442500 -0.1442500 -0.1272000 -0.0419740 -0.0911550 -0.9037100 -0.0647300 0.0284810 0.0393730 0.0755710 -0.8398600 -0.8884300 0.0577960 -0.9088100 -0.9088100 0.0338310 0.0338310 -0.9689000 0.0382060 -1.2929000 -0.0138150 -0.0138150 -0.0071845 -0.0149180 -0.9562300 -0.0150540 -0.9407800 -0.9451800 0.0315770 0.0315770 -0.0571160 0.0454240 -0.9348900 -0.0066432 -0.0294480 -0.9905300 0.7617200 0.0232860 -0.1442500 -0.1272000 -0.0419740 -0.0774770 -0.1030300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.229 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.229 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 -0.403 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-D8-A13Y 52 0 NA 1728 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 3 1 NA 1 5 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 5.548757e-07 9.724836 11.226971 11.094512 9.735996 8.117924 8.051983 8.142361 10.656329 8.404153 12.589712 11.044023 10.482073 3.794104 9.674811 2.546166 9.763524 5.955562 7.743388 7.688279 12.075968 8.519151 10.084361 6.146085 10.077031 10.047014 6.984963 4.886023 7.112226 11.005347 4.755625 9.290164 5.745845 3.675455 2.633640 10.029987 10.141895 9.121711 9.086300 10.083875 11.740313 1.353549 8.534857 13.666572 9.691938 10.764432 10.836767 10.510151 6.840793 4.568537 9.386163 9.995836 6.881562 10.752270 5.476910 4.190030 5.038023 8.416536 12.293945 9.793506 9.023930 11.857920 7.034012 10.947051 11.413452 10.715470 9.734761 4.612258 12.534501 7.731047 NA 9.956093 10.595680 7.497719 4.038023 8.783382 10.436056 9.662516 10.234859 7.347071 7.523451 10.399481 10.410358 10.576149 10.144224 0.7858200 0.0380650 0.0370760 0.8720900 -0.0128700 -0.8513000 0.8473100 -0.8924300 -0.8608200 1.0945000 0.3726500 0.8623500 0.0118180 -0.8657000 -0.0369460 1.1447000 1.1447000 0.0105640 0.8067500 -0.8446500 0.0104240 2.2129000 -0.8310900 -0.8310900 0.8083100 -0.8247200 -0.8247200 -0.8557200 0.8122000 -0.8339700 -0.0468330 -0.8425100 0.0248290 -0.8766900 -0.8690800 0.0151680 0.0290440 -0.8924300 -0.8608200 -0.0033243 0.0071858 0.0512450 -0.8777500 -0.8719700 -0.8719700 0.0058309 -0.8273300 -0.8657000 -0.8821500 -0.8674300 -0.0038779 -0.8632600 -0.8632600 0.0105640 -0.8561500 -0.8659400 -0.8446500 -0.8571800 -0.0076277 -0.8755700 -0.8642900 -0.8310900 -0.8916600 -0.8247200 -0.8247200 -0.0378980 -0.0309500 -0.8729100 0.000 -0.866 0.000 0.000 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 0.000 0.000 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 -0.319 0.000 -0.866 0.000 0.000 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 0.000 0.000 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 -0.319 7.3176613 11.7146871 6.2740920 10.7773928 4.2659019 10.0480089 NA -0.4538340 9.1627206 8.4196156 4.9037228 7.1386292 4.2740902 10.0071394 8.8176348 6.4165358 4.1900301 10.0375238 9.5967006 9.4188465 8.4454230 8.9724365 10.9111270 -0.4538340 8.6269892 8.6933765 3.5461660 -0.4538340 11.5401714 5.3916612 11.3127006 11.4698706 6.5850902 9.9719121 6.9212114 8.7135900 9.4103579 0.5461660 -1.4536364 8.7322858 7.7821857 9.1654746 8.3438333 8.9692875 9.1729850 6.1084136 9.4687560 6.6442038 9.3135286 1.5461660 7.5263114 1.3535491 5.6122611 9.3986467 8.2306747 NA 9.1404962 6.8993182 -0.4538340 0.8681336 13.8271961 0.1311944 10.3806427 NA 9.1226559 6.0930657 8.3193108 7.3947945 8.742651 8.656002 7.784577 9.674811 9.810614 11.188223 12.075968 13.352671 9.941143 11.080667 11.849667 9.801790 9.386163 7.479863 3.453057 8.284264 9.937415 10.5376935 8.8882464 9.0117176 9.0350160 3.5003687 9.5865779 4.3790595 9.1737056 11.0440235 8.5277389 1.7161129 8.7433884 9.6419116 9.8164669 8.3822220 7.4379551 9.4417470 9.3052275 0.8681336 11.2698774 9.1217109 10.0299874 10.3478800 11.7058854 10.2947838 10.4249889 8.4072584 1.3535491 8.5801726 NA 10.7522702 7.5517959 10.8425430 8.4165362 8.6561460 13.6558799 10.0137773 9.5369848 11.2657744 9.5553004 8.8982150 2.0056156 TCGA-D8-A13Z 51 0 NA 635 breast NA t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino 6 3 4 NA 1 3 2 6 1 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 2.774378e-07 10.2219882 9.4609131 11.9180826 10.4200028 8.3187606 9.2672415 9.5953494 10.2988062 10.5663674 13.1586301 10.9428232 10.5454152 -1.8895031 11.8885009 3.1105303 9.6058819 3.5367865 8.4074428 7.8418455 12.6072554 0.6954594 6.5028445 6.7651621 9.4445929 10.7187812 4.3199791 3.0647277 8.9455187 11.6679902 1.8109777 9.0144083 8.4028479 NA 5.0293910 10.4171578 11.9113253 9.4114510 9.6870108 10.6331080 11.6355578 12.3654812 9.2164350 15.3379732 7.3252101 9.6992410 11.3042058 10.9712255 5.2294687 2.6340821 9.2481581 11.8610241 0.6954594 10.0852996 5.1873402 6.5451545 5.3866523 8.9528769 11.9929785 10.1228019 11.7384023 12.6180734 7.8787106 10.4125941 9.6271276 10.8303430 11.3316604 4.8654141 11.7292561 9.9422296 NA 10.2111888 9.5555413 3.2586546 5.4143081 11.6984211 10.1473868 9.9754863 9.4420034 3.9178804 9.8209024 13.2032836 11.5212428 11.0321814 10.0963683 -0.137940 0.553540 0.587930 -0.232270 0.269700 -0.500700 0.033690 0.707010 0.806170 2.191000 -0.735380 0.052241 0.522060 0.522060 -0.101970 -0.509290 -0.509290 0.748610 0.266870 -0.247880 3.656900 -0.327970 -0.157970 -0.157970 -0.157970 0.240070 0.240070 -0.070536 0.279630 0.154120 -0.137940 -0.250790 -0.232270 -0.506390 -0.777190 -0.505150 -0.018902 0.549120 0.608400 0.575230 0.000000 0.000000 -0.783800 -0.232640 -0.232640 -0.212310 -0.212310 0.522060 1.073800 -0.101970 -0.101970 -0.170690 -0.170690 0.534150 0.266870 0.266870 -0.425710 -0.158730 -0.223790 -0.219230 -0.157970 -0.157970 -0.495590 0.240070 -0.070536 0.288990 0.505330 -0.263480 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 0.000 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 0.000 8.6003746 14.2413584 3.9178804 9.1630946 4.4324517 12.4049318 3.6651199 4.1549234 8.6083783 8.2577315 -0.3045406 7.5679485 1.4324784 10.4117368 9.1446376 1.9178900 8.1328945 9.9158673 8.1494453 8.7261562 8.6993441 7.5283791 11.0808121 2.5699528 8.8927055 9.9966040 1.4324784 -1.8895031 9.9000601 1.8109777 11.6360472 13.0384433 7.5720059 10.2785718 10.5890433 10.1752692 6.9901096 3.4324517 NA 6.4548224 8.3477365 8.9219010 10.4760287 3.4680750 9.1491986 6.3150970 9.8165907 5.7900057 9.4757553 1.6955039 11.3534028 3.1979912 3.5367865 9.5355273 6.9553581 6.0763111 9.7611295 9.0493710 6.6458025 3.7543851 13.2105728 1.2804219 10.2388431 NA 9.7597827 4.7829537 8.5399331 7.9716131 10.610123 8.871246 7.670859 11.888501 10.120005 11.298033 12.607255 9.190011 8.758884 11.768961 12.816375 8.378483 9.248158 9.105587 1.432478 7.569958 11.258367 11.5739231 6.3150970 9.3637830 8.9122349 9.0683540 10.5062480 7.4414436 5.8452366 10.9428232 9.6173299 1.5699771 9.5998727 8.8975475 11.7904463 10.5420241 7.1020481 8.6737228 9.5740508 6.9901096 9.5696455 9.4114510 9.9255093 9.3843221 11.8828410 10.1900112 10.9077827 9.1535538 -0.3045406 9.5014907 7.0174175 10.0852996 6.9591500 10.6034637 8.9528769 8.0559705 12.6677508 10.3065138 10.1549206 12.4998217 11.7873651 9.6761046 1.1104969 TCGA-D8-A140 62 0 NA 403 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 3 5 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 6.242351e-07 10.9452554 10.4886568 11.7724920 10.2818118 7.6950292 9.5462100 11.4206791 10.1514766 8.8890394 14.1825340 11.2479890 11.1359609 0.9725456 13.9614250 5.2799912 8.2468247 5.5931506 8.6813020 10.0305546 12.7198327 2.4579882 14.5761428 NA 9.7690761 11.2551879 9.4409831 0.9725456 7.8180529 9.2080985 -1.3492354 8.0169570 6.8842548 -0.3494192 6.6164195 10.1941500 10.0972011 9.9273408 10.6382541 9.4071911 11.6921228 2.5575326 11.4491065 14.3695421 10.0441163 10.1494840 12.2479890 11.3635915 3.7380977 6.1975293 9.7766939 11.2971934 NA 11.6091874 4.1100625 6.5635243 5.3230602 10.0836984 12.0669045 9.5256161 11.7371027 12.8580304 7.9882564 10.8539827 10.9138423 11.4793662 11.6416250 5.1741987 11.9380586 11.7913047 -1.3492354 10.2922349 9.5960785 3.1984470 5.7274495 10.9663504 10.3648802 10.1859101 10.8688952 1.8205670 7.9521308 12.4650169 10.9904847 10.1663346 9.6513389 0.0024969 1.8608000 1.1124000 0.0079175 0.0044411 0.0206230 0.0101460 -0.0336770 -0.6489600 -0.2748800 -0.6661500 -0.0106460 -0.0187650 -0.0120240 0.6786400 0.6238800 0.6547900 -0.0496950 0.6596100 -0.0200010 0.0038854 -0.0468540 -0.0794760 1.6546000 3.2492000 1.3293000 -0.0501000 -0.1023700 0.5592100 -0.0972320 0.0024969 -0.0442800 -0.0189020 -0.0036011 0.0186630 0.0101460 0.0348240 -0.0106460 -0.6224600 -0.6938800 0.0027745 -0.0077482 -0.6877000 0.0154470 0.0154470 -0.0040162 -0.1226500 -0.0120240 -0.0045695 0.6721700 0.6238800 -0.6577100 -0.6577100 -0.0145120 -0.6500600 0.5900900 -0.6316900 -0.0098185 -0.0276710 -0.0410240 -0.0794760 -0.7223400 0.0141900 -0.1496200 -0.1393600 -0.0486130 0.0199230 -0.0985500 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 9.0213220 12.7167239 7.1741967 9.4507257 3.6506382 10.6998026 2.4579882 -0.3494192 8.2671837 7.0300127 -1.3492354 7.6965580 4.5332768 10.2694790 10.1673197 1.4580145 8.0579024 9.3449927 7.0852632 9.2542610 10.2551879 8.5754474 10.6120844 1.8205670 9.4434249 9.7895464 1.6506267 0.6506727 11.3855560 5.3648805 11.4535549 12.2510123 7.8379867 10.1564463 9.9943756 8.8054527 5.2505486 3.2944884 -0.3494192 1.2356045 8.8355101 9.5694979 10.4712126 4.5575265 4.9317776 5.3785567 10.0568397 6.6785410 8.7591592 NA 11.5909483 3.7799215 5.4961236 9.1721567 6.2664474 8.4336330 9.0726994 8.7099791 10.2393493 NA 13.4251130 0.2356045 10.8469294 NA 6.4961252 5.3510735 7.8794534 8.4221241 14.309888 4.294488 8.533278 13.961425 10.605195 10.509393 12.719833 14.626080 9.633521 11.218828 13.762422 10.692978 9.776694 7.599002 -1.349235 9.620021 12.024451 11.234423 7.474002 8.950987 9.021322 8.239349 10.557807 7.134451 6.418819 11.247989 5.581372 -1.349235 2.457988 8.043639 10.331434 9.347602 8.766979 9.609912 12.804662 9.906253 11.785175 9.927341 11.099267 10.124848 9.909201 9.683369 10.973689 8.906843 -1.349235 8.813970 9.537093 11.609187 5.716725 10.849681 10.083698 7.915077 13.138286 10.105448 9.346733 12.144615 10.512497 10.447485 4.820562 TCGA-D8-A141 40 0 NA 626 breast NA t1c n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 2 NA NA NA 1 4 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 3.81477e-07 1.040392e-07 10.488193 9.860379 11.912644 9.549109 8.422445 9.696648 10.668262 10.190840 10.449386 11.338846 10.626939 10.478589 3.693097 12.627870 2.968736 9.936518 8.152525 8.628801 9.491608 12.557279 3.574453 12.901007 4.654619 9.828222 10.587911 7.558907 NA 10.859058 9.756346 3.030124 8.329336 7.642382 NA 5.615090 9.950977 10.040889 9.684764 10.787518 10.465451 11.460755 10.577344 10.979712 15.420420 9.013692 10.128599 11.127721 11.019759 5.375901 -0.554909 9.165410 11.192729 0.445197 11.071559 6.233067 7.999754 5.802718 10.456742 11.749517 10.551074 13.000953 12.925956 7.773841 10.970686 10.450839 11.002869 11.108056 4.837484 12.158230 10.071787 NA 10.507212 9.184102 3.607863 6.309353 11.266541 10.575736 10.141699 10.011220 2.693097 9.551074 13.299157 12.970381 10.190840 9.655228 -0.00097017 0.51194000 0.51194000 -0.00097017 -0.00097017 -0.00484610 -0.01202400 -0.00314930 -0.00138580 0.25784000 0.25784000 0.25784000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00249690 0.00249690 0.25308000 0.25902000 -0.00138580 0.00025448 0.00025448 0.00025448 0.00471900 0.00471900 0.00471900 0.00027728 -0.00097017 -0.00097017 0.00000000 -0.00097017 -0.00484610 -0.00484610 -0.01202400 -0.01202400 -0.00314930 -0.00314930 -0.00138580 0.00000000 0.00000000 0.25784000 0.25793000 0.25793000 0.25793000 0.25793000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 -0.00263220 0.00249690 0.00249690 0.00249690 0.25308000 0.25902000 -0.00138580 -0.26167000 0.00025448 0.00025448 0.00027728 0.00471900 0.00471900 0.00027728 0.00124810 0.00736090 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 0.000 10.790016 14.587771 6.548454 10.554670 4.880460 10.760315 4.634988 -1.554697 8.440933 9.015021 0.445197 8.249296 2.767104 10.167973 9.271714 2.145612 10.187896 9.119358 10.424591 10.530970 9.344334 7.484085 11.393715 3.837479 7.890180 10.266940 8.702553 NA 10.892249 2.904600 12.746019 12.264946 8.622585 9.612584 9.352808 9.276473 4.854554 0.445197 1.030124 7.867231 8.611329 9.032943 8.499092 4.303145 8.529283 5.693094 10.096217 6.022594 9.304700 NA 11.128160 4.730569 4.200057 9.477383 6.174854 7.152525 9.937519 9.391341 8.236329 -0.554909 13.583717 1.445144 10.239175 NA 9.080884 4.785017 7.589824 9.078161 11.433920 5.173087 8.677586 12.627870 10.661002 10.564755 12.557279 12.027072 9.189158 10.871692 13.489133 11.217068 9.165410 10.372944 1.615087 7.503157 10.763991 11.833856 5.200053 8.917857 8.812580 8.149069 10.903790 8.744374 7.881877 10.626939 6.450791 1.445144 5.239581 7.010267 12.380054 11.291635 8.927973 8.511255 10.625696 8.312444 11.623379 9.684764 11.022358 9.856677 10.732012 10.703143 10.920646 9.406615 5.433851 9.878746 8.443756 11.071559 9.242017 11.326471 10.456742 7.321683 13.917222 9.919379 10.330862 13.073554 10.940021 10.008362 2.904600 TCGA-D8-A142 74 0 NA 425 breast stage iib t3 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.352509e-06 6.242351e-07 10.4555838 9.4041972 11.2549251 9.1520929 8.6274781 8.2446973 8.7981565 10.1955479 11.8921870 12.9821205 9.7500185 10.4179870 1.4092551 12.5414566 1.6723348 9.7491283 4.9328407 8.6666661 16.6733799 11.2225784 -1.9126729 9.7611009 6.1534385 9.9000970 11.4071634 2.7312050 -0.9126729 10.1588091 11.3099941 2.5467834 9.5323649 7.6514995 -0.9126729 6.7167070 9.3119549 10.0349871 9.5852020 9.7410909 9.3077284 10.9606020 2.0873610 8.1166371 16.0963695 7.4490529 9.5901620 10.9747612 10.9369507 3.4796703 -0.9126729 9.0298647 11.1724906 -1.9126729 10.3269487 5.9202409 6.3113523 5.5871969 10.1678346 11.4890297 9.6400193 11.6796904 12.5219784 7.6666664 10.7666103 10.7675975 10.7050472 10.7082573 4.0180911 11.3149661 9.8596648 3.9942448 10.4860938 9.3657997 5.3847233 5.7455627 11.3679759 9.6826075 10.2326455 9.9711390 5.8752517 8.2919212 12.8956105 11.5116477 9.7938461 9.2345550 0.6559000 1.2154000 0.6935300 0.0013868 0.0013868 0.0000000 0.3122500 0.7137700 0.1064300 -0.4179400 -0.0324500 1.3954000 2.1310000 -0.3981900 1.8547000 0.3539800 0.3539800 -0.1866000 -0.1866000 -0.1546400 -0.3936200 -0.4410100 0.0423510 0.0423510 0.3569900 -0.0521260 0.2006000 0.1954000 0.6667800 -0.2150300 -0.1930000 -0.1067300 0.0013868 -0.2638600 -0.0642240 -0.4318100 -0.4318100 0.7137700 0.1064300 0.1064300 0.6360900 -0.0175290 -0.4269000 -0.0597410 -0.0597410 -0.0597410 -0.0597410 -0.3883900 -0.4534000 -0.4378900 0.3539800 0.4627300 0.4627300 -0.1866000 -0.1866000 -0.1866000 -0.1351200 -0.3936200 -0.4363700 -0.2111900 0.0423510 0.0423510 -0.3344500 -0.0521260 0.2006000 0.2409300 0.0161460 0.2510500 1.972 -0.429 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.315 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 0.136 1.972 -0.429 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.315 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 0.136 9.2560223 14.4176893 4.9942403 10.0024826 1.6723348 13.5250372 2.1748218 8.6732515 8.9367551 7.8882501 8.7294019 8.8290193 1.2572521 10.4299805 9.0480762 2.3352832 8.0574562 11.1235237 9.1694991 9.7451151 8.9576839 7.6741901 12.9092238 2.7877877 9.4427012 11.0149429 5.0180867 NA 10.8860245 1.0873271 12.9268000 12.3883461 11.9723791 10.1527663 7.6438562 9.5966303 2.8947014 2.8422347 -1.9126729 3.7312050 8.7843178 9.8212129 5.9577150 4.5302955 9.6199690 7.4205051 9.8041696 6.4882290 10.1668349 7.7239749 12.5491493 3.6419390 4.5630849 9.6389816 5.3100019 8.5157105 9.1412759 8.4514848 10.0433632 0.6722896 13.3049671 0.8946820 10.7509083 NA 9.3529653 5.1097199 8.3376487 8.7998770 11.0746141 7.0646296 8.3329030 12.5414566 9.2821071 10.6588658 11.2225784 10.4101233 9.3361968 10.2922269 13.2218166 9.5313296 9.0298647 8.6956048 -0.3277104 7.9344074 11.0648090 11.0808193 5.7239735 8.6816748 9.4623896 8.8716007 9.9618398 6.6534040 5.9202409 9.7500185 6.9972427 7.3564766 9.2949747 8.2199782 13.0891981 10.4030658 7.8152706 8.4978016 9.1594826 8.7410908 11.1135312 9.5852020 10.0563768 10.1283247 11.6197061 11.0095629 10.4553109 9.5467818 -0.9126729 9.9885866 9.4574925 10.3269487 8.4742904 10.7992730 10.1678346 6.8603570 13.6527498 9.9745708 10.2706754 12.4987287 10.9359730 9.7203453 4.1534406 TCGA-D8-A143 51 0 NA 431 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 3 4 NA 1 3 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.080784e-07 8.9693477 9.5827014 12.0913015 9.5459385 8.8525997 9.2122809 9.7805862 11.5769963 10.5637160 13.9696880 11.7047882 11.2244209 -0.4023973 11.7754578 2.9898838 9.5044617 5.0405155 9.2030506 7.0363627 11.7257266 NA 8.4710151 7.8431240 10.5799587 10.7044612 4.0238320 2.2980131 10.7993887 12.2698860 0.1825652 9.6309942 9.5495843 -1.4023973 6.2049017 10.1974839 10.7336010 10.1716916 9.1230919 10.0631375 10.5393524 13.6647954 9.8655282 14.5939122 7.2458569 9.7674961 11.5098991 11.5452081 4.3524619 4.5517682 9.3126752 11.9424218 NA 11.1923622 3.9551268 6.0813865 3.5517621 7.7599627 12.4222316 9.5890931 10.4633044 12.6394869 8.8898927 10.9096032 10.4092549 11.0227870 11.2934519 4.2414284 11.5218269 8.6185511 NA 10.2535490 9.5201555 3.7231435 4.6636577 8.5919247 10.9655319 9.7612208 8.5238673 -0.4023973 8.6797201 13.0276316 11.6044231 10.5812773 10.6538702 0.5491200 1.5690000 1.5690000 -0.0328600 1.3063000 0.0041632 -0.0698670 1.2793000 0.6437800 -0.7293200 0.2538500 0.2593400 -0.0656950 -0.0404860 1.1795000 -0.0989450 0.0000000 1.4065000 -0.3638600 3.6569000 0.3551200 -0.4097000 0.5380100 0.5380100 0.5380100 0.2150700 0.4026600 0.3325400 0.7294300 0.5491200 0.5491200 -0.1522100 -0.0552040 -0.1634700 -0.0806740 -0.6808600 -0.0246610 1.2793000 0.6437800 0.6218100 0.3352900 -0.1074600 -0.7293200 -0.6847800 -0.6847800 -0.1568500 -0.1611500 -0.0404860 -0.0404860 -0.3670300 -0.0989450 -0.7359100 -0.0590000 1.4065000 -0.3638600 -0.3638600 -0.6981200 0.3551200 -0.0434940 0.8812600 0.5380100 0.5380100 -0.0275350 0.3562600 0.3325400 0.7294300 0.0077783 -0.1132500 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.186 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.324 0.000 -0.475 0.254 -0.685 -0.157 0.125 0.125 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.186 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.324 0.000 -0.475 0.254 -0.685 -0.157 0.125 0.125 8.3887341 13.4125541 0.9195308 9.3390380 4.5796508 12.1531189 2.4049304 7.3557942 8.9474052 7.1483179 1.9194926 7.0432067 6.4367748 11.0667042 8.5400858 6.0322000 6.6956028 10.7070754 9.9206259 10.4201419 9.1463833 7.0363627 10.9396458 1.5975550 8.7034797 9.4847917 2.4049304 NA 10.9033479 4.2980131 11.5517675 13.2371380 7.2735280 9.6683629 8.6378609 10.2141199 5.6743872 3.5975669 NA 8.0048390 9.2360070 8.6876836 9.1512005 2.8454901 9.0804397 6.6474196 10.6720471 5.0733061 10.4328321 1.4049031 12.3342902 2.8454901 1.4049031 9.1805410 7.0037765 7.9149836 9.0048390 8.0196358 9.8800804 4.1521591 12.7579941 0.9195308 11.5492201 0.1825652 9.5968666 3.8070251 8.7422293 7.7113132 8.970131 10.347859 8.464850 11.775458 10.268019 12.175826 11.725727 7.245030 9.453218 11.591571 12.786392 9.316104 9.312675 8.369061 1.182565 8.298011 11.162435 11.397055 6.498438 9.125048 8.968258 10.038959 10.368706 6.065176 6.845499 11.704788 8.626859 1.182565 11.614031 10.398984 13.138426 9.396853 8.552553 8.845499 8.825187 8.362443 9.341438 10.171692 9.758703 9.966623 11.719590 10.801225 10.630994 8.275291 10.195624 8.381600 8.825187 11.192362 4.826391 10.194693 7.759963 8.259616 13.743225 10.569115 10.154077 13.042068 11.747318 9.316960 3.641962 TCGA-D8-A145 80 0 NA 410 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 8 2 2 NA 3 2 3 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 11.0133153 10.6152652 12.2512761 9.2530663 8.1624991 9.5355297 11.3628071 9.6745300 9.9274361 13.7317128 10.4717737 10.7410126 1.0127832 12.7996749 3.6908193 9.9154284 6.1337669 9.0723668 9.5141911 12.9467376 2.0127474 13.4900042 6.4787259 9.1040182 10.9069634 6.6333382 -1.3090019 9.4246866 9.1044517 2.1502672 8.7716413 7.3310683 NA 6.3843106 10.7135384 10.0820675 9.5581025 11.4882827 10.3454598 12.2842149 10.7983679 11.0696606 14.7320124 8.4286118 11.3514883 11.7240747 11.5173723 6.6156370 6.0571470 9.4457114 11.8970751 NA 11.1548590 7.3667812 6.0483757 4.6450214 10.1002147 11.8027745 10.2372360 11.7357302 13.0943019 7.4819867 11.0104959 10.7381352 11.5931989 11.8218769 5.6096870 11.4965677 11.7020511 0.6908193 10.3786369 9.1866788 3.9177182 5.4322913 10.5213391 9.9739121 10.2925946 9.7173472 3.6908193 8.1461511 13.2456525 11.9402336 10.2020823 9.5977144 0.08739000 0.08739000 0.08739000 0.00055459 0.00711490 0.01237600 0.00847430 -0.17962000 -0.17962000 -0.19950000 -0.19950000 -0.19950000 -0.04429000 -0.04429000 -0.19887000 -0.19887000 -0.19887000 0.00013863 0.00013863 -0.36658000 0.02927300 -0.00968060 -0.21553000 -0.21553000 -0.21553000 0.15188000 0.15188000 0.15188000 0.43243000 0.08739000 0.08739000 0.00694350 -0.41355000 0.01237600 0.01237600 0.00847430 0.00847430 -0.17962000 -0.17962000 -0.18446000 0.00000000 0.00000000 -0.19950000 -0.20386000 -0.20386000 -0.20386000 -0.23401000 -0.04088800 -0.09052300 -0.19887000 -0.19887000 -0.19922000 -0.19922000 0.00013863 0.00013863 0.00013863 -0.36658000 0.09072000 -0.00968060 -0.21280000 -0.21553000 -0.21553000 0.00416320 0.15188000 0.15188000 0.43243000 -0.21231000 -0.20784000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.260 0.047 -0.216 -0.216 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 0.000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.260 0.047 -0.216 -0.216 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 0.000 9.7676394 12.3875740 6.1665568 10.0884985 4.6215596 10.9042319 3.4981743 -1.3090019 8.4981787 8.3843106 -1.3090019 8.7870383 3.2143891 9.7716413 9.9202436 1.0127832 10.3224556 9.9529187 9.4212940 9.6442927 10.0862883 8.6623675 10.8519557 3.4457135 8.6709635 10.0127519 3.8607443 -0.3091807 10.2767252 3.8201075 12.6281976 12.0851525 8.2396458 10.0412105 7.2944498 9.1461511 4.3912659 1.2757818 1.2757818 6.6851777 9.0161294 9.0702023 9.1776587 6.1420356 8.7723740 6.6738179 10.0031395 6.7515200 9.4498797 0.6908193 12.7580060 3.8607443 4.9576082 9.4519345 6.4713956 8.1440943 9.1223215 8.9027122 10.0317865 1.0127832 13.6989898 1.0127832 10.5472493 NA 7.6304033 6.4656105 7.5363141 9.0636890 13.490510 5.182676 8.855731 12.799675 10.113940 10.324273 12.946738 13.554284 8.978536 11.156900 12.967748 11.001153 9.445711 7.233855 3.976226 7.794112 11.684116 11.2547350 7.2907368 9.1604657 9.1876777 8.3201805 10.8590917 7.1866788 9.4507121 10.4717737 6.9991623 2.3912728 6.7020508 7.1316934 12.7302570 10.2939864 10.1023348 8.1806715 12.7300856 9.6267255 11.3814089 9.5581025 10.3342291 9.3490352 11.3727211 10.0138786 10.6537198 9.4965676 0.6908193 9.3734409 9.3981830 11.1548590 7.3238186 10.8917224 10.1002147 7.9268380 13.9320994 10.1766531 10.0356745 12.6071698 10.9121088 9.9440804 3.3912591 TCGA-D8-A146 57 0 NA 643 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 3 1 3 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 10.82424334 9.91880377 11.79201824 9.96988724 8.42432840 8.99174291 10.66602645 9.95029343 9.66412867 13.48601518 11.02785874 10.75519897 1.83187724 12.10950758 4.29130149 9.82735604 7.19293781 8.54611697 9.82509298 13.05611437 2.75787666 13.42007077 6.94457152 9.04375980 10.70254440 6.69976815 -0.49005085 9.24041356 11.58391753 2.75787666 7.81600507 7.59475156 0.09491165 5.44067984 10.29621304 10.48758111 9.57535942 11.17283426 10.35032795 12.19063254 3.67986289 11.71084198 14.75114451 9.20194844 9.33410654 11.18015700 10.89256741 4.57603229 5.21038497 9.59607959 11.33529974 -1.49005085 11.20864802 6.68985265 6.29784620 5.15380128 10.32131809 11.69031879 10.31326728 12.52439979 12.87735813 7.79303164 10.74535928 10.53363187 11.36227782 11.06716771 5.53231072 11.99464043 11.29068819 NA 10.38454062 9.02662829 3.90603434 5.47572695 10.22676283 10.10706482 10.46922085 10.03448508 4.36792315 9.32452576 13.64099647 11.93673226 9.90172402 9.61781437 -0.1987500 0.6507500 0.6507500 0.0576530 0.0576530 -0.0175290 0.2807400 0.0459910 0.0459910 0.0478360 0.0478360 -0.4950700 -0.0646330 -0.0166530 -0.0262100 -0.0262100 -0.0262100 0.0111210 0.0111210 -0.3009800 0.2689100 -0.2067200 -0.5045300 -0.5045300 0.0655130 0.0086135 0.0086135 0.0086135 0.3071300 -0.1987500 -0.1987500 -0.1761300 0.0576530 -0.0175290 -0.0175290 -0.2882200 -0.2882200 0.0459910 0.0459910 0.0459910 0.2934200 0.2864400 0.0478360 0.1637400 0.1637400 0.1656500 0.1736200 -0.0166530 -0.0095426 0.0102850 -0.0262100 -0.0262100 -0.0262100 0.0111210 0.0111210 0.0111210 -0.3009800 0.2689100 -0.2067200 -0.3005400 -0.5045300 -0.5045300 -0.2486100 0.0086135 0.0086135 0.3071300 0.0036076 -0.2393600 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.269 -0.207 0.546 0.257 -0.505 0.000 -0.253 -0.253 0.000 0.000 -0.199 0.452 0.307 0.307 0.000 -0.239 -0.176 -0.176 0.000 0.000 0.000 0.000 0.239 0.239 0.000 0.000 0.293 0.293 0.000 0.000 0.164 0.164 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.269 -0.207 0.546 0.257 -0.505 0.000 -0.253 -0.253 0.000 0.000 -0.199 0.452 0.307 0.307 0.000 -0.239 -0.176 -0.176 0.000 0.000 0.000 0.000 0.239 0.239 0.000 0.000 0.293 0.293 0.000 0.000 0.164 0.164 0.000 0.000 9.39258640 13.95321072 7.00978944 10.10006254 3.95454065 10.51907214 4.12465072 1.09491165 8.24634538 8.74954198 NA 8.50194702 1.83187724 9.84644991 9.33410654 1.50994915 8.95288682 9.64821519 12.15379957 10.35347195 10.06902408 8.41533024 11.26106897 3.36793014 9.95495818 9.77145068 3.96937155 -0.49005085 10.56285096 3.41683974 12.42750194 11.90360198 8.40324471 10.06357264 8.10613314 8.90118700 4.73876243 0.83187724 1.83187724 2.09491165 8.67610659 9.48435789 10.12970481 5.65969056 8.76257339 6.48148624 9.52256800 6.63406465 9.54061047 0.09491165 12.09185005 2.90226657 5.66981482 9.77622624 6.18109460 6.78606832 9.05394190 8.89472714 7.09114444 -0.49005085 13.19644391 0.83187724 10.58174093 -1.49005085 7.43475581 5.39258533 8.17350125 8.41983633 13.324526 5.521170 8.646934 12.109508 10.182811 10.654602 13.056114 11.947565 8.873717 11.018729 13.329574 9.094906 9.596080 8.878450 NA 7.349147 11.442712 11.3160902 7.2714948 8.8652944 9.0374204 7.4347558 10.6970851 7.2344573 8.8784498 11.0278587 7.0491025 2.5099491 6.1609948 6.4768806 11.7586122 10.4172096 8.5211705 8.5474903 11.7074672 6.9108226 12.0283789 9.5753594 10.5113516 9.6256373 11.3189076 10.0869000 10.6801814 9.4957853 0.5099491 9.6298118 7.5071231 11.2086480 8.5597920 10.8710153 10.3213181 7.1823685 13.1133959 9.9314823 10.2585556 12.3228226 10.4648666 9.8647438 2.5974120 TCGA-D8-A147 45 0 NA 584 breast NA t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.913097e-06 8.323135e-07 9.3970527 10.0818380 11.9222989 10.0141921 8.7278538 9.8503377 9.8916785 10.7175446 11.0876310 13.0604710 11.5966567 10.7860168 2.6719953 12.0319812 3.1789536 9.9387870 6.7903954 9.4268880 12.9226106 -0.5758304 -0.5758304 6.9824940 10.9608058 8.8023677 10.9932165 6.4901626 -0.5758304 9.7410275 11.7302771 4.7460010 8.8345245 9.1070674 0.4240621 2.5939991 9.7341177 10.6958278 9.1494392 9.1305690 10.2498268 11.6362654 0.4240621 8.6237454 14.7409555 8.7517154 10.1485868 11.1735234 11.1219093 5.3309635 -0.5758304 9.7140918 10.9444461 -0.5758304 11.7931250 5.8587022 7.1070674 8.2882589 8.8034515 12.6042930 9.9598343 12.0049204 13.8267187 7.4099153 10.8954942 11.0317315 12.2370524 11.7308467 5.2414398 11.9845252 9.8377009 -1.5760454 10.8188036 10.2140140 4.9955976 6.1655402 11.7510641 10.5864642 11.2003003 10.4533602 8.4834176 5.8670167 12.8568106 11.5572152 10.6669493 9.8623451 1.058100 1.328200 2.938100 -0.377020 0.042227 -0.442380 -0.404240 0.026013 0.882350 0.612520 0.612520 0.612520 -0.020353 1.088200 0.107810 -0.463930 0.018257 0.522310 -0.067533 0.033611 -0.067131 -0.080616 -0.461400 0.436730 -0.430240 0.328250 2.639100 -0.106120 0.502110 -0.041779 1.058100 1.434400 -0.377020 -0.495330 -0.201560 -0.866370 -0.421290 -0.424790 0.882350 -0.371950 -0.239310 -0.042322 0.421070 0.000000 0.000000 0.000000 -0.503240 1.088200 -0.224350 0.107810 -0.463930 0.807420 -0.848080 0.522310 -0.067533 -0.067533 -0.864490 -0.428500 0.388400 0.020544 -0.401580 0.368780 -0.063913 -0.485920 -0.535970 0.502110 0.919540 -0.035389 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.181 0.000 0.000 0.613 0.000 0.000 -0.213 -0.213 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.181 0.000 0.000 0.613 0.000 0.000 -0.213 -0.213 8.224972633 13.453834675 5.970966360 9.914923837 3.124510115 11.175198533 -1.576045406 4.205431614 8.492851416 7.697868321 9.342190701 10.920542299 4.763921421 11.121257773 9.459559488 5.282054244 11.606777683 10.414886037 6.418426104 8.623745442 9.233567911 8.252209374 10.770863643 2.816394909 9.422663381 9.796393991 0.424062125 -1.576045406 10.064769840 1.593975179 13.068323586 12.142926862 8.163853425 9.596500443 12.528753607 10.226185414 5.993927921 3.947638107 -1.576045406 6.412757819 8.283607908 7.244251555 5.754989022 4.816389789 8.739992527 6.935825090 9.947144804 5.923919300 10.248633976 0.009060468 12.664342568 3.178953610 4.330967058 9.258678383 6.375065504 4.993927921 8.376814331 7.852433379 5.947635769 4.947633432 13.516788815 0.745968715 10.562664771 -1.576045406 10.372805219 4.746000973 8.964201068 7.479355071 9.5597822 9.9743387 8.0570684 12.0319812 10.6655438 12.2372529 -0.5758304 10.8924425 8.8012835 11.8882358 13.6518769 11.4068883 9.7140918 8.8886188 1.7460117 7.5352085 11.4648764 10.7474092 3.7816220 9.0183974 8.9476349 10.0543400 10.1752194 7.6672471 4.0964980 11.5966567 9.7054235 0.4240621 8.2442520 9.6254373 13.3489318 10.2561718 8.0534296 8.2249726 8.9948775 6.8419253 9.7066808 9.1494392 9.7594633 9.2990544 11.9286437 11.0511508 10.4159491 10.3680528 -0.5758304 9.8656270 5.9554546 11.7931250 6.7728015 9.8146020 8.8034515 8.6920299 14.4385076 10.1566643 10.9867924 13.3524525 10.6347443 9.4443585 1.7460117 TCGA-D8-A1J8 77 0 NA 431 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 3 2 NA NA 2 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 4 6 0 6 0 0 1.678499e-05 5.895554e-06 10.7498644 10.8083266 11.3817106 10.3529934 8.0829931 10.1114908 9.7979324 10.8005933 8.8562223 13.9269109 11.2431701 10.6285621 NA 10.4804365 4.4354886 8.0234921 6.1317088 8.7845534 9.4963902 13.4113914 NA 13.3765181 5.6630884 9.4008350 10.6882144 4.9518861 NA 10.9379095 10.7067748 -0.8682788 7.1761023 8.4648639 NA 3.8041362 10.3710085 11.8155802 10.0753220 11.6651597 11.3376543 11.9853103 -1.8682788 11.2003187 13.5908197 8.3186151 8.7728569 10.9951203 11.0552216 3.8596317 3.6235626 9.0066896 11.6746193 NA 11.1832572 6.0624456 8.1910528 4.8459516 11.0496398 11.9202228 9.9846279 12.1223442 13.5017146 6.9865770 11.1010948 10.7487166 12.3361266 10.6594297 4.9261228 11.7761280 10.1285348 -0.8682788 9.5834347 9.1324126 3.2246732 5.4445909 10.7615202 10.4046296 9.4654227 10.2326991 2.1317212 7.9989869 13.0034211 12.4454417 10.2770037 8.5175706 -0.38638 0.38122 1.11930 -0.39708 -0.39708 -0.39908 0.40361 0.35692 0.34866 -0.22207 -0.22207 -0.22207 -0.39553 -0.39553 -0.27019 -0.27019 -0.27019 0.39263 0.37718 -0.39930 0.39330 -0.38587 -0.39118 -0.39118 -0.39118 0.37314 0.37314 0.37314 0.42536 -0.38638 -0.38638 0.34648 -0.39708 0.41329 -0.40549 0.40361 0.38287 0.35692 0.34866 0.34876 0.38634 0.38634 -0.22207 0.39363 0.39363 0.39363 0.39363 -0.39553 -0.39553 -0.26829 -0.27019 -0.27019 -0.26889 0.39263 0.37718 0.37718 -0.40451 0.39330 -0.37909 -0.37932 -0.39118 -0.39118 -0.38392 0.37314 0.37314 0.42536 -0.39241 -0.38302 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.063 0.450 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 0.000 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.063 0.450 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 0.000 8.3831906 12.4685635 7.4055040 8.7961555 1.3048615 10.7594702 0.4536493 -0.8682788 8.0158789 8.3460274 NA 8.6893729 1.8321609 10.9526851 9.1951035 -0.2833163 7.3215331 9.9538808 10.6764313 8.2571219 10.2920619 9.0888105 9.5277778 2.2191840 6.7464176 9.0924342 0.4536493 NA 8.5673785 2.9896840 11.8731753 11.3647287 8.1189722 11.1570210 9.0734896 9.4637448 4.1977946 2.5240135 -0.8682788 -0.2833163 6.8865953 5.4626250 10.7124380 1.4536493 6.1154432 3.9646019 9.7025128 6.0683462 9.0617063 NA 11.1448565 4.4536361 4.2609891 10.6908607 5.2085251 4.8596267 9.2018294 9.0631845 4.3215313 -0.8682788 13.7738164 -0.8682788 9.4826474 NA 7.6552702 2.6552602 9.2402327 7.8664178 12.3863576 7.3289253 8.2558297 10.4804365 10.1852406 11.5167618 13.4113914 10.6528180 9.4217272 11.2336840 13.4674476 8.4171107 9.0066896 9.3760722 0.9390761 7.3041359 11.4104482 10.661383 7.508919 9.814703 8.997442 9.292840 10.794895 5.541100 7.929370 11.243170 5.804134 1.716684 7.355710 7.976289 10.412479 11.415520 7.761065 6.062446 11.976806 7.011292 12.540323 10.075322 11.206352 9.139436 11.901856 8.796155 11.064661 9.522952 2.038612 8.152980 6.192403 11.183257 7.906496 10.194092 11.049640 7.343597 12.574069 10.447707 10.962818 12.104688 9.982676 10.217181 1.131721 TCGA-D8-A1J9 48 0 NA 532 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 2 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.84945e-06 1.456549e-06 9.89579125 10.17288925 11.72321399 9.79061241 8.38421519 9.88585116 10.67969183 9.72878547 10.04044535 14.24857087 10.27116010 10.58112571 0.87302570 17.47726803 5.69502780 8.44179759 4.62026382 8.64404481 6.69138062 13.38721283 -0.93428984 12.40399078 6.76263982 9.14502371 12.11756087 5.73809767 0.65067266 8.89777105 11.56327460 2.65062672 8.09357813 7.49612516 -0.93428984 4.97256400 9.42377396 11.07777293 9.29208439 11.22270327 9.76220512 11.27497328 NA 9.84374930 14.73545695 7.58428608 9.42706766 10.90369427 11.59021393 4.52510419 6.05435795 9.69912162 12.35741851 0.06571016 11.41661140 5.59705437 7.10733113 4.70952776 10.65368409 11.58530848 9.77604821 12.18209740 12.94036547 6.80038225 11.15031456 10.38022435 11.47413464 11.04098282 4.87302570 12.32232320 8.41440026 -1.93456555 9.95669646 9.62265715 2.53945663 6.47930009 10.32276540 9.74647133 9.64310110 10.05186976 4.94831583 11.46174177 12.62868970 12.38456803 9.17484980 9.20650208 0.0308730 0.6712200 0.6712200 -0.5444600 0.6282500 -0.0941030 0.1355400 0.0467000 -0.3155200 -0.4980900 -0.7837800 0.5027300 0.0362290 -0.2314100 -0.5963300 0.5647200 0.6178800 0.0461330 0.0461330 -0.2495800 0.0570830 0.0852210 -0.6140300 3.6569000 -0.0677260 0.0000000 0.0000000 0.0000000 0.0539480 0.0308730 0.0308730 0.0757030 -0.5769400 0.0134920 -0.0941030 0.0048579 -0.0013858 0.0467000 -0.3155200 -0.0076101 -0.4896300 -0.0514510 -0.7983600 -0.7107800 -0.7107800 -0.8542400 -0.8921200 -0.2314100 -0.2314100 -0.6155600 0.5647200 -0.6124900 -0.6124900 0.0461330 0.0461330 0.0359470 -0.2495800 0.0570830 -0.6047700 -0.6071900 -0.6252200 -0.5991700 -0.9848500 -0.0147780 0.0000000 -0.6565900 -0.0857220 -0.0744090 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.506 -0.506 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.506 -0.506 8.94831525 13.07847132 6.78677146 9.11824031 2.03005352 12.23152136 1.06564124 -0.34941924 8.15048047 9.41163174 -0.93428984 7.25029937 3.79359421 11.06708043 8.88903937 1.97254562 6.73100805 10.43908119 11.10527677 11.19302175 9.51252281 7.54948821 10.93121220 2.52509166 8.29809328 9.58481710 0.06571016 1.76612867 9.72566806 3.35107704 11.42597063 13.28555918 7.55351257 10.32306005 9.75479666 9.06919007 6.37855497 1.52511672 -0.93428984 2.15312435 7.85357467 9.01768534 11.50082157 2.52509166 10.12596616 6.82722328 9.68772402 7.29689327 9.24122169 NA 10.78933320 3.45798820 3.15314057 9.69308302 3.95392636 2.58923616 9.15710765 8.66465527 4.25549318 -0.34941924 13.27482093 0.06571016 10.03936956 NA 7.52510419 4.52510419 9.44234038 8.38647256 12.45895877 6.73809767 8.74162911 17.47726803 9.76611194 10.77798429 13.38721283 10.39994554 9.74902216 10.82680785 12.85474730 8.43308714 9.69912162 9.21985751 0.06571016 7.70410837 11.24573677 12.45207364 6.14782156 9.31537829 8.27024346 8.14550373 12.40755099 6.34644282 6.66186216 10.27116010 6.59705437 0.06571016 6.51275468 7.21486015 11.65192561 9.34005036 7.01695645 7.40329414 10.04581180 4.69503058 10.78395889 9.29208439 10.39854790 10.09840679 11.42184903 9.32894145 11.73677093 9.19237666 4.49193645 8.50157170 3.70953327 11.41661140 8.83054373 11.78202119 10.65368409 7.51068743 13.32589346 10.30973872 9.89539503 12.34738496 10.80587460 10.53683933 0.87302570 TCGA-D8-A1JA 60 0 NA 502 breast NA t4b nx m0 female 2010 NA yes infiltrating ductal carcinoma NA white not hispanic or latino NA NA 3 1 NA NA 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 5 0 0 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.281926e-05 7.421462e-06 10.2976814 10.9087943 11.1445395 10.3274857 7.7648537 10.1257758 7.4687446 10.5600947 9.3893930 14.8536105 10.1067650 10.8545342 -0.8844340 15.8847767 4.2241252 8.3347658 5.8704856 9.5392387 6.6967979 13.3178361 -0.8844340 11.6528158 3.4731505 8.6489274 10.8045033 8.2030602 -0.2993827 9.5338454 12.7896242 1.4375474 7.4993014 8.9269723 -0.8844340 4.0697967 10.9655889 11.1500525 10.1800034 10.9595185 12.3461433 11.5342407 4.1155993 10.9158907 13.6488055 6.5952963 9.8688142 10.6044418 12.3787199 3.7594541 6.4056163 10.0012938 11.7702335 -0.8844340 12.0685206 2.6391627 6.3299165 4.8837821 10.7014989 11.4963291 9.4982215 11.9198293 13.5179101 7.1708795 11.0174071 9.4172308 12.0590280 10.7966162 4.4010024 12.7787664 11.0160869 0.4375474 9.5719519 9.3256598 1.9239858 4.7449522 10.1341453 9.8738207 9.0005311 10.5811639 1.7005729 8.4009998 12.8710588 11.8260810 9.6892446 9.7919954 -0.00664320 0.68666000 0.72830000 0.00624810 0.00763920 0.96227000 0.02693500 0.00913300 0.00913300 0.01070300 0.01070300 0.01070300 -0.00083160 -0.00083160 0.00848550 -0.00097017 -0.00097017 0.00000000 -0.00567570 -0.74273000 -0.00180140 0.70064000 -0.01807800 3.65690000 -0.02137300 -0.03827100 -0.03827100 -0.03827100 -0.00774820 -0.80053000 -0.00664320 -0.75952000 0.00624810 -0.78041000 -0.74133000 -0.76954000 0.01279500 0.02834100 0.00913300 0.00913300 0.00833510 -0.76740000 0.01070300 -0.75892000 3.28650000 -0.00519910 0.01950300 -0.00257140 0.04429000 0.00337330 -0.00097017 -0.78623000 0.04584900 0.00000000 -0.00567570 0.00263570 -0.74273000 -0.00180140 -0.01340200 0.00930980 -0.78732000 -0.78387000 -0.76252000 -0.03827100 -0.03827100 -0.00774820 -0.00097017 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 -0.106 -0.106 6.5036143 12.4952466 6.2345377 7.7192238 2.8160467 11.1275235 0.1155660 NA 7.1735892 9.3581762 NA 9.8846997 1.1155660 10.8604313 8.6958560 -0.8844340 5.1155993 9.9365742 11.6041908 7.4819197 9.0099680 8.6233921 9.5334500 1.2855206 5.7880227 8.9229524 0.1155660 -1.8841677 10.9747440 0.4375474 11.1346669 12.2761780 9.2371311 10.7483655 10.0232393 8.9967113 7.1816870 1.1155660 0.7005285 -0.8844340 6.1599924 5.2448794 11.5208719 1.1155660 8.3295398 4.4554456 9.2299904 6.6273500 9.9333805 NA 8.2742071 5.0697924 2.6391627 9.8520374 6.3800870 4.2653469 8.3299165 7.7950773 2.5750218 NA 13.1380086 -0.2993827 9.6014267 NA 7.7773757 3.7303030 8.7720222 7.5418625 12.496464 6.948488 9.941351 15.884777 9.632440 11.102506 13.317836 10.998623 9.528559 11.144540 13.825597 7.084264 10.001294 11.764966 NA 7.817770 11.908794 10.664419 6.558542 10.205048 8.824681 7.570924 10.306931 4.473150 6.437526 10.106765 5.857065 -0.884434 7.283015 8.347395 12.901356 10.591078 7.548139 6.208355 10.530547 4.773806 11.453871 10.180003 10.717600 9.647466 11.329005 8.615443 11.062869 9.368263 4.607449 7.900020 3.816036 12.068521 8.037438 10.300163 10.701499 7.641118 13.137135 9.684029 9.988272 12.386623 10.091445 9.987503 3.159984 TCGA-D8-A1JB 54 0 NA 1688 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 6 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 10.6925077 9.9023736 11.6817009 9.6082711 9.2091936 9.5721283 10.0965412 10.3034654 9.6321451 13.7521842 10.9970267 10.8440017 0.8450283 13.3388517 3.7992531 8.7489405 6.2026117 8.9178613 9.1293047 12.7543894 2.5454989 13.2924004 7.0099652 9.1993082 10.5437634 8.3488844 -0.1548914 9.6966986 9.4073011 3.1669885 8.1804493 8.2586866 -0.1548914 5.0545142 10.7196559 10.4807769 9.8014350 10.8562861 10.2379128 11.4227237 6.3764397 10.6099304 14.0548167 8.2468555 9.7728368 11.0965412 11.1835166 4.8223376 5.2373763 9.4643618 11.7633630 NA 10.6419096 6.5999456 7.6588398 4.2373725 10.9503125 12.1077409 10.4510012 12.1169594 12.8797718 7.7368423 11.0575552 10.6805487 11.3147006 10.9145085 5.3207915 11.7726516 12.1783539 -1.1548914 10.1065661 9.2341523 4.2377167 6.1759756 10.4593086 10.2639655 10.7269375 10.2217268 4.4889134 9.4253173 13.4178774 12.3821558 10.1882445 9.5940902 0.1136000 0.1136000 0.4643600 0.0902850 0.0801680 -0.0034627 -0.2173800 0.3145000 -0.1225200 0.0898510 0.0898510 0.0898510 0.1271200 -0.2139200 -0.0637030 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0518140 0.0868110 0.4071100 0.2725300 0.2725300 0.2725300 -0.0015243 -0.0015243 -0.0015243 0.2035000 -0.1145000 0.1136000 -0.3092100 -0.2155200 -0.0034627 -0.0733040 -0.1236900 -0.1236900 0.1736500 -0.1225200 -0.1225200 0.0847870 0.0801680 -0.2212100 0.0721090 -0.2051000 0.0637950 0.0637950 -0.2139200 -0.2139200 -0.0637030 -0.0637030 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0054139 0.0518140 -0.2115600 -0.0694660 0.0566550 -0.2384900 0.2725300 -0.0678000 -0.0015243 -0.0015243 0.2035000 -0.2099500 -0.2325100 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 -0.101 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 -0.101 10.2728954 11.7334215 5.3528538 9.7861064 6.1379318 11.1319053 4.5454989 1.6524177 8.2859279 9.4347100 NA 7.6132428 2.5454989 10.4058692 9.2597440 1.4300176 9.6206691 9.9010191 11.0068205 10.3592797 9.5379271 8.0496297 10.2702746 4.0929854 8.6459588 10.0361180 4.3686217 NA 10.5262971 5.2200977 12.9327702 12.2202340 8.2900737 10.8348081 9.6612424 9.3577992 7.0882328 0.4300711 -1.1548914 0.8450283 7.8894529 8.0471828 10.4821365 5.5315593 9.0812405 6.6588398 10.2890384 5.8894541 10.1793320 NA 11.0520731 3.0929854 6.7875735 9.5693168 6.0732033 7.3842174 9.5907332 8.7963434 8.2544495 NA 13.4982397 1.8450685 10.7999821 NA 7.7639221 6.1849091 8.6572363 9.3126643 11.962863 5.352854 9.075079 13.338852 10.593671 10.866733 12.754389 12.670018 9.302060 10.716194 12.758322 11.540940 9.464362 8.059378 NA 8.061805 11.887573 10.8959278 6.7030398 9.0435039 8.7292292 8.3587866 10.3381236 8.0618048 8.8323229 10.9970267 6.4149152 6.3686200 6.4523895 7.3179525 11.0134175 11.1370928 8.0318666 7.9218743 10.9756293 8.9807679 12.3985981 9.8014350 10.4073012 9.6370356 11.5019305 9.9935354 10.5415917 9.0678538 -0.1548914 9.1743842 9.1106738 10.6419096 5.9846099 10.8597767 10.9503125 7.3288742 14.0374672 10.2135653 10.3548338 13.0911313 9.9865274 9.7654116 3.4300176 TCGA-D8-A1JC 59 0 NA 480 breast stage iiia t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 1 NA NA 1 2 1 2 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.872705e-06 6.589149e-07 10.9735926 10.5817003 11.7883704 10.3112242 8.8559657 9.3711602 9.5148770 9.6762477 9.6946095 14.2863979 11.1063852 10.6880785 2.8551924 12.5634994 4.6976460 8.5546713 7.0223467 8.9922679 7.5802902 12.2049845 4.0195774 13.9933499 5.3895255 8.8735939 11.3588771 5.7114536 1.8045492 10.9919145 11.3787504 3.2066589 8.5604039 7.6536326 -2.0028883 4.4729426 10.3120739 10.7680778 9.7637364 11.8406379 10.1693224 12.1410690 6.8489571 9.9866019 14.7052945 8.7563882 9.3792911 11.3625731 12.1088322 4.1057284 3.4566353 9.6040754 11.2363584 0.3191555 9.5826395 5.4810244 6.7981076 4.9279438 9.9744874 11.6538558 10.3029843 11.8599417 12.8077289 8.7769268 10.7985117 10.2439184 11.8185829 11.2653108 5.7183068 11.9542188 10.1621145 -2.0028883 10.7253406 9.7773370 1.7031893 5.3895255 9.7445612 9.5266381 10.5736919 11.0031828 3.9040987 6.2593026 12.6170836 10.8857605 10.4832883 9.0381821 -0.654910 0.758530 0.762930 0.071391 0.054732 0.096525 0.000000 -0.514550 0.024408 3.656900 0.494070 1.444500 0.080024 0.074455 0.066229 3.656900 3.656900 0.111690 0.111690 -0.668460 -0.153490 0.049682 0.141620 0.141620 0.141620 -0.652580 -0.189490 0.077292 2.792900 -0.656680 -0.654910 -0.092681 -0.673430 0.096525 0.055715 0.000000 0.000000 -0.514550 0.024408 -0.745340 0.086348 0.029466 -0.705170 -0.666700 -0.666700 -0.176890 -0.160770 -1.005300 -0.661520 -0.663370 0.092750 -0.664480 -0.677100 0.111690 0.114620 0.114620 -0.668460 -0.153490 0.050819 -0.621880 -0.654450 0.141620 -0.648090 -0.652580 -0.189490 -0.052396 -0.689240 0.103660 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 -0.196 1.445 -0.667 -0.177 0.000 0.000 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 -0.196 1.445 -0.667 -0.177 0.000 0.000 8.810186972 13.187765242 7.271003533 10.063296651 1.904079412 9.851296645 -0.417925779 0.319155458 8.451506628 8.089964701 -1.002888279 7.570361981 2.389511746 10.746238856 8.775284671 4.892026663 10.996326670 9.588729812 9.465831453 9.970546112 9.768639231 8.113551530 10.277108244 3.245130531 6.047056276 10.070344914 2.582170591 -1.002888279 10.574636287 1.904079412 11.171821112 11.433007935 7.680201970 10.386838854 10.640161681 9.108343063 3.830093032 1.582170591 -0.002743728 1.319155458 7.038866327 8.174627129 10.370616469 3.041593449 9.011730154 7.716596568 10.059928316 6.277979170 9.965874306 -1.002888279 9.877173530 3.927943848 4.337054524 9.860181913 5.053250385 4.226022926 9.520279229 8.287226167 7.235612191 1.804549245 12.886663920 0.997183998 10.279716777 -0.417925779 6.551795916 3.997211101 8.451506628 8.701110970 14.884341 6.389526 8.704567 12.563499 9.175872 10.854994 12.204984 11.713384 11.223233 11.207879 12.865451 10.031663 9.604075 7.757096 0.997184 7.316880 12.725978 10.9584763 6.7686965 8.3225127 9.6114572 9.8029514 10.2140867 6.9010889 7.9025946 11.1063852 6.5821706 0.5821706 3.9040987 9.1838170 11.2168298 10.3058309 10.2742042 7.7131693 12.2947686 5.9687520 11.4769764 9.7637364 10.4913130 9.9866019 11.3001320 10.3703446 10.7293749 9.0859958 7.1444125 8.6231993 5.5129063 9.5826395 8.3314809 10.5278577 9.9744874 7.5952597 12.1726791 9.5694339 9.7682843 13.2577228 9.6806408 10.0063363 0.5821706 TCGA-D8-A1JD 41 0 NA 552 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942065e-06 3.81477e-07 10.3424445 10.3699355 11.5452261 9.7213292 8.3124950 8.5344157 9.5503678 9.8849315 9.8700544 13.1593529 10.8762099 10.7716266 0.2779847 12.7695738 4.0853227 8.8704282 6.6355237 8.5605965 9.8459273 12.2338390 4.3483599 13.2012987 7.3354216 8.8599248 11.4829091 6.5029368 -0.4589808 12.0200448 12.6456044 1.6564964 7.9742431 7.5010075 -1.0439433 4.1057870 9.9203840 10.7847747 9.4363284 11.8745337 9.7806042 11.2113668 -1.0439433 10.6871499 15.0106051 7.9113297 9.7500527 11.8596426 11.6082159 3.8629373 NA 9.8182930 10.7903166 NA 11.3428487 6.0328590 6.9867101 5.9218267 9.5985461 11.4666837 10.1347080 11.7072734 12.9263288 8.7666147 11.0143731 10.5219354 11.4004110 11.2999228 4.7504564 12.7214846 11.0172456 NA 10.5725919 9.6890585 2.4376006 6.7008766 9.9763287 9.8070113 9.8878886 10.9863654 3.0435020 7.2298388 12.8892266 12.1843357 9.3627795 8.7762221 -0.0031859 0.3611800 0.8564000 -0.3485100 0.5836300 0.4828500 -0.0084385 0.0076392 -0.3516800 -0.6964900 -0.6964900 1.9242000 0.4835400 0.3381300 0.5542500 0.7400500 0.0200630 0.1420600 0.1420600 -0.4152100 0.4945900 -0.3106100 0.0978330 0.0978330 0.0978330 -0.0060607 -0.0060607 -0.0201380 0.6671500 -0.3221700 -0.0031859 0.0000000 -0.3328300 0.4828500 0.4483300 -0.0084385 -0.0084385 0.0076392 -0.3516800 -0.7126500 -0.4864900 -0.5847100 -0.6964900 0.2299300 0.2474700 0.2474700 0.2474700 0.3381300 0.3356400 0.5542500 0.0011093 -0.6073800 -0.6073800 0.1420600 0.1420600 -0.6996500 -1.0142000 0.4945900 -0.0641060 -0.6790700 -0.6587300 0.0978330 -0.0340860 -0.0060607 -0.0201380 0.6671500 -0.6668900 -0.3114300 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 -0.311 -0.290 0.000 -0.333 -0.333 0.483 0.115 0.000 0.000 0.000 -0.352 0.109 0.109 -0.696 1.924 0.247 0.247 0.149 0.149 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 -0.311 -0.290 0.000 -0.333 -0.333 0.483 0.115 0.000 0.000 0.000 -0.352 0.109 0.109 -0.696 1.924 0.247 0.247 0.149 0.149 9.3854498 13.6906998 8.6035017 10.0576906 3.0004327 10.1474109 0.5410192 -2.0439433 8.3025567 8.7905140 -2.0439433 7.9325644 -1.0439433 10.7987863 9.0018028 2.1259817 6.6599474 9.9704124 11.1381271 10.7938682 10.3126492 7.6720052 10.1287831 3.6284703 9.0833926 9.6621074 8.5058278 NA 10.6353033 1.5410192 12.2349281 11.8523755 8.2621047 9.5935738 9.3086385 9.0955946 6.2087084 0.2779847 -1.0439433 6.4031262 8.4717431 8.5296902 10.2101860 2.7109221 8.4911436 7.4990749 9.8144128 7.0955943 9.3250952 NA 9.5962880 4.0645639 4.7633956 9.3284512 5.6034305 5.1557169 8.8926809 8.5010075 8.4287341 -2.0439433 13.3034569 -2.0439433 10.5228107 NA 6.7109304 3.3135941 7.3223653 8.4922902 13.13176809 6.18004440 9.20456381 12.76957382 9.81518970 10.92812541 12.23383903 11.84059525 8.97413205 11.13564125 12.83332726 10.91477707 9.81829297 8.95110371 -0.04394335 7.85388839 10.69919451 11.565799 7.970063 8.620490 9.155716 9.115284 10.667523 7.529691 4.241444 10.876210 5.814025 4.184859 4.415475 7.757105 11.081134 9.897824 9.447831 9.581295 12.220706 6.356922 11.516936 9.436328 10.653662 10.028511 10.856721 9.284718 10.605075 9.221072 NA 8.900675 5.730830 11.342849 9.158167 10.515946 9.598546 8.201905 13.561899 9.801533 9.876024 12.652196 10.629131 9.604850 2.277985 TCGA-D8-A1JE 62 0 NA 575 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.733986e-07 10.5643598 10.8921292 11.3220948 10.5394875 8.6607850 9.5611044 9.4875611 10.1362563 9.6253764 13.7652630 11.0118188 10.7892276 2.4340010 11.6451123 3.8865014 8.8380135 6.6859107 7.9674246 9.8053679 13.4859884 -0.2290441 14.1046487 5.4148831 9.4609207 9.9426212 7.8062847 -0.2290441 8.5000818 11.5437544 0.5080229 6.6039171 7.5567520 NA 4.2945913 10.2541714 11.8246140 10.6393356 11.5658494 10.1944935 11.3179219 -0.8140066 10.8797697 14.5105971 6.4577141 8.5181015 11.3921635 12.1663830 4.7559184 4.9674269 9.2467608 12.7976661 -0.2290441 11.7998544 4.5954559 6.4760835 4.7252231 10.9962349 12.0281206 10.0564296 12.4168359 13.1102743 8.3484564 10.9459531 10.8664552 11.6583750 10.9863582 5.5869448 12.1874731 10.7710275 -1.8140066 10.0629656 9.2181106 2.1569143 6.8263095 10.4241711 10.0054457 10.1340670 10.1142132 1.6455172 8.9442880 13.3199296 11.4281970 10.4061409 8.9131345 -0.4163000 0.3961200 0.3961200 0.0145720 0.0189430 -0.3901800 0.4185600 -0.4076000 -0.3864900 0.0095883 0.0095883 0.0095883 -0.4203600 0.1227000 -0.4158800 -0.4158800 -0.4158800 -0.4136300 0.3678900 -0.3904000 0.0061830 -0.4186000 -0.4455500 0.0955080 0.0955080 -0.0665200 -0.0665200 -0.0665200 0.3657500 -0.4163000 -0.4163000 0.0000000 0.0145720 -0.4552200 -0.4201400 0.4299100 0.4299100 -0.4076000 -0.4076000 -0.4219300 -0.4069400 -0.4069400 0.0095883 1.1813000 -0.3970800 0.3771000 0.3771000 0.1227000 0.1227000 -0.4158800 -0.4158800 -0.4068300 -0.4068300 -0.4136300 0.3678900 0.3373900 -0.3904000 0.0061830 -0.4186000 -0.4276100 -0.4455500 0.0955080 -0.4038500 -0.0665200 -0.0665200 0.3657500 0.0023581 0.3409600 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 0.000 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 0.000 8.3832818 13.5755282 7.8514011 9.3185647 0.5080229 10.5773085 -1.8140066 NA 7.2655494 8.9926146 NA 8.2058084 2.3560029 10.2695442 8.9550762 2.4340010 7.9122828 9.9380274 10.7859778 9.0471517 9.2084326 8.2748533 10.4909866 3.3153489 9.5981054 10.0641158 -1.8140066 NA 9.4887038 2.1860568 12.1232548 11.6860353 8.2263549 10.4133800 9.9050259 9.0564296 4.5259123 3.4339876 0.7710404 7.6536706 7.1079054 5.9139856 9.0839103 1.7710404 6.8585256 5.0062442 9.8424897 6.8549494 9.6248569 NA 12.3710177 2.6454942 4.0687052 9.5003707 5.1088590 1.7710404 10.2791523 8.4598607 2.8299307 NA 13.5871444 0.9934208 9.7368117 NA 7.0502514 3.9934208 8.5826696 9.4106697 12.1628680 5.7252231 8.1860647 11.6451123 9.9990445 10.9871670 13.4859884 12.0236929 9.1315087 10.6495893 13.0710939 8.5314704 9.2467608 9.3011086 -0.2290441 7.9122828 11.7347664 10.9078050 7.7896914 8.7943197 8.7775874 9.5848086 10.3619762 6.8690595 7.5954559 11.0118188 7.2249837 -0.2290441 7.4668359 7.1296643 11.0729046 10.1881767 8.2331887 6.4481593 14.6176115 4.9542475 10.9118018 10.6393356 11.1002632 9.2146618 10.6883995 8.7597121 11.2292632 9.2635483 NA 8.4027503 3.4714736 11.7998544 10.3030586 10.5375370 10.9962349 6.7096270 13.1494126 10.3204912 10.4607343 13.3230160 9.4070478 9.4726226 3.3559888 TCGA-D8-A1JF 79 0 NA 366 breast stage iiia t1c n2a m0 female 2010 NA no infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 4 2 NA NA 2 6 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 2.080784e-07 10.8401298 11.0982511 11.0599780 10.3949711 9.0280906 9.5655517 8.3796712 10.3405352 9.5246888 14.1929111 9.2135082 10.8467305 4.1204017 12.7772407 10.0531056 9.6334684 5.9482177 8.5195698 5.9750592 12.4886142 NA 9.3909277 -0.2015762 9.3996225 12.1319056 8.0621309 3.8573640 10.4939890 11.5484797 1.2135028 7.7468381 8.2903239 NA 6.1263968 11.1798334 10.3730643 10.7531517 10.3568914 10.7923525 12.3261106 -1.7863728 8.6882283 13.6530145 7.8841467 8.1022513 12.0022265 11.8151629 3.7370702 -0.7863728 9.6470936 12.8070160 -0.7863728 10.4732515 4.6564506 7.7232835 4.9683949 11.4782440 11.4441291 10.0467936 11.7462294 12.9744360 6.4708964 11.2839646 10.3545232 11.5483401 10.7690560 5.1907887 11.6476151 8.5012206 -0.2015762 10.2503687 10.1713357 1.9403547 5.9549756 10.9681870 10.9324691 10.1986385 11.3361744 4.0961522 9.6902544 12.0856059 12.3207253 9.9833461 8.4802946 -0.3735300 0.3727200 1.0602000 0.3604200 -0.0200790 -0.3957000 0.5362000 0.5969900 -0.0215880 1.6852000 1.6852000 1.7180000 0.3471300 0.2298400 -0.0565190 0.3218000 0.3218000 -0.0043720 -0.0123790 0.5887300 0.3514400 -0.4157000 0.1501600 0.1501600 0.1501600 0.3155300 0.3155300 0.3374300 0.7230900 -0.3795000 -0.3735300 0.0039449 -0.0165080 -0.4325200 -0.3996400 -0.4021400 -0.3970400 0.5864000 -0.0185690 -0.0633770 0.6802000 0.6561600 1.6852000 -0.4169700 -0.4139400 -0.0306180 -0.3991400 -0.4110800 -0.4110800 -0.0565190 0.3218000 0.3218000 0.2716500 -0.0043720 -0.0072747 -0.0413730 0.5960900 0.3514400 -0.4050200 0.3169800 0.1501600 0.1501600 0.1639100 -0.7576700 0.3563300 0.7115800 -0.3672100 -0.0311640 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.051 -0.397 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 0.000 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.051 -0.397 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 0.000 8.6861990 12.3874976 8.8226868 8.5477814 2.7370594 9.9277537 0.5354558 NA 8.3809264 6.9448268 NA 7.9553628 0.7985068 10.4761903 8.8410422 0.2135028 8.7843126 9.7360897 7.0992047 10.3664268 9.5437752 8.1604145 9.4051842 2.2135028 8.8180616 9.4272200 0.5354558 NA 9.7709719 0.7985068 12.4534050 12.1933799 7.7757505 11.2817826 6.9208673 9.7267423 6.5081291 1.0208400 0.7985068 NA 7.7565403 8.0208633 10.7980010 3.1677112 8.8450035 7.1993504 10.2120986 6.9717309 9.5600219 NA 10.9403649 3.4614369 4.0714881 10.2639079 4.4139664 7.8573646 8.1412861 8.3632552 8.3128562 6.1263968 13.0345846 1.0208400 10.5218472 NA 7.0240803 4.7370702 9.0456071 9.4602488 10.854808 6.903506 9.335689 12.777241 10.325296 11.592345 12.488614 9.908301 9.563342 10.932041 12.824821 9.142027 9.647094 10.111732 3.383428 8.390928 12.218694 10.3174516 6.8465033 8.4779509 8.5950512 8.7232831 9.1503375 5.7604019 5.5798318 9.2135082 6.1618756 2.7984653 5.4326755 8.2479493 11.1030122 10.2071542 8.4732516 6.7173337 10.1346052 8.5578041 12.3670824 10.7531517 10.1563892 9.8492263 11.8665771 8.7843126 10.2417596 9.4878862 -0.7863728 9.9992100 8.5776430 10.4732515 8.4720742 9.6244895 11.4782440 6.9243149 13.0248272 9.9919961 10.8169027 12.8866516 8.9087364 9.5115708 2.9139521 TCGA-D8-A1JG 62 0 NA 1612 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 6 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.705019e-06 7.282743e-07 10.5781374 9.5150055 11.4547136 10.6423634 8.2243650 10.3150542 10.3121214 10.6703463 9.8377497 13.6983304 10.2086799 10.5011654 4.4417557 14.2903982 4.5572324 9.0374138 5.7147758 9.1074310 8.0079921 11.5858079 -1.9506480 9.7107720 3.7773566 8.9846042 11.8166926 8.4058911 2.8043221 10.4487171 11.5351428 -0.3656855 9.0794165 7.7688281 1.0494217 7.0578683 10.6233230 10.0592678 8.6428304 9.6386222 10.3304999 12.1218231 11.5548786 8.2029911 14.3477703 8.9443782 9.6348619 10.8862786 11.4412198 4.2392605 1.8567865 9.0437926 11.1918654 NA 10.8120289 4.9563308 8.6769733 5.3162254 9.7794846 11.5685840 9.8692192 11.8206191 13.0667261 5.7773592 10.7576609 10.3684565 11.7711793 11.8206191 5.7841480 11.4520516 9.8130666 7.2949919 10.3206104 10.0349253 3.7227174 5.3532209 9.1349117 9.3475018 10.2764534 10.6040280 4.8567965 9.0267190 12.2590449 11.7192101 9.7013877 8.7705384 0.064696 0.064696 0.062408 -0.253060 -0.244690 0.412500 0.427090 -0.247360 0.826720 -0.270050 -0.270050 0.730620 -0.231990 -0.251290 0.048730 0.000000 0.000000 -0.226950 0.068564 -0.609670 -0.254510 -0.239810 -0.598830 0.734220 0.120980 0.087867 3.538600 -0.248210 0.439070 -0.024703 0.064696 0.106910 -0.234070 -0.334070 0.352560 -0.617930 -0.626130 -0.247360 3.656900 -0.268010 0.432650 -0.265250 -0.280690 -0.611500 -0.611500 0.159100 0.159100 -0.251290 -0.251240 0.048730 0.000000 0.000000 0.000000 -0.160100 0.068564 0.027258 -0.609670 -0.243350 -0.239810 -0.238350 -0.598830 -0.557940 -0.251120 0.087867 -0.248210 0.460120 0.736500 -0.255720 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 1.915 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 0.000 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 1.915 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 0.000 9.1787221 12.6233822 4.1369050 8.7333110 4.5711186 10.8779724 2.5730109 -0.9506480 9.7121075 8.7576610 NA 7.7432221 8.0759626 10.8978666 9.3359970 0.8567865 7.8823294 9.7628257 9.8925751 10.1560022 9.4769669 8.2029911 10.5477898 1.7498775 7.6437639 9.3520781 4.2588958 NA 10.2237407 3.4069856 11.6678247 11.7400920 8.0704194 9.5180632 10.6803888 8.8704159 7.3463551 1.6344074 -0.3656855 NA 8.4513855 9.0202641 9.7739530 1.6344074 9.8675101 7.3255636 9.5764275 7.9074201 9.4667643 -1.9506480 9.8515517 3.9563262 2.7498775 8.9081896 6.2727660 9.0501436 8.8743980 9.2564536 10.7976320 3.3713637 13.1209854 1.0494217 10.5639067 NA 9.8365255 5.0381245 8.6878750 7.5027101 9.3668518 9.8515517 9.8009832 14.2903982 9.3003297 11.2690615 11.5858079 9.7355020 8.2686075 10.7472755 12.9329894 8.0065415 9.0437926 7.8664228 0.3713916 7.9487959 11.4499184 11.723631 6.433143 9.167082 8.905865 8.673321 10.771897 7.567109 8.305648 10.208680 6.824227 2.749877 2.219370 8.912301 13.357743 11.316518 7.641373 9.313882 9.854780 9.841823 10.702257 8.642830 10.149444 9.376992 11.429088 10.050847 11.179849 9.775231 -0.950648 10.519829 9.926340 10.812029 7.746407 11.581430 9.779485 8.161879 12.929258 10.270422 10.922306 13.032566 10.626632 10.312708 5.316225 TCGA-D8-A1JH 56 0 NA 426 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma NA white not hispanic or latino NA NA 2 6 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 10.7507582 10.5500418 11.9980566 10.2967851 8.1533641 9.0764375 10.5882835 10.1407160 9.7899175 14.1863237 11.0344521 10.9559138 1.4873834 12.8539033 3.6718029 9.8909754 7.9453227 8.7205661 10.2168487 12.5744835 2.4873834 13.4906766 4.9937332 9.5520908 10.9636683 4.0723459 NA 9.6790023 9.5578692 4.0503188 8.2543630 7.8828191 2.1978654 5.3588674 9.8718718 10.3439494 10.1170701 12.2770642 10.1887676 11.8667607 7.7977886 11.9595193 14.9347591 7.8372848 9.6025443 12.0225694 11.5100024 5.3040766 5.5036827 9.4884066 11.9407465 0.6128714 11.1195514 6.2078597 6.8288511 5.4116533 10.8357081 11.7455200 10.5044438 12.6809077 12.9766830 8.0791594 10.9199242 10.8303641 11.4258927 11.4341557 7.6014655 12.0789047 11.9263632 -1.9719967 10.5188016 9.2312987 3.2800506 6.0447591 10.9316444 10.3722466 10.0682405 10.1700577 4.7144489 8.8280416 13.8028150 12.1534449 10.2663554 9.3964573 -0.00124730 -0.00124730 -0.00124730 -0.01761900 -0.00456950 0.11717000 0.16370000 -0.00470790 -0.00470790 0.19223000 0.19223000 0.19223000 -0.01891500 0.01405100 -0.01609800 -0.01609800 -0.01609800 0.00055459 0.00055459 -0.02342900 0.00000000 0.09463700 0.00249690 0.00249690 0.00249690 0.11814000 0.11814000 0.11814000 0.12049000 -0.00124730 -0.00124730 0.00208050 -0.01761900 0.12638000 0.16220000 0.16370000 0.15912000 -0.00470790 -0.00470790 -0.00470790 -0.00788630 -0.00788630 0.16397000 -0.00774820 -0.00774820 -0.00774820 -0.00774820 0.01405100 -0.02009400 -0.01609800 -0.01609800 -0.01491600 -0.01693200 0.00055459 -0.00124730 -0.00124730 -0.02342900 0.00000000 0.09463700 0.04670000 0.00249690 0.00249690 -0.11678000 0.11814000 0.11814000 0.12373000 0.10366000 -0.03245000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.159 0.159 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.159 0.159 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 0.000 9.85012322 13.69639256 7.94382992 10.31161789 2.34118877 10.52330613 2.93483727 NA 7.90906442 9.01592513 2.72839946 8.36222395 3.95868494 9.98323733 9.32199707 0.83527734 9.58732786 9.45526351 11.09437636 9.64679503 9.50744800 8.18529768 11.23007455 4.11541618 9.79240769 9.93183254 5.86084116 -0.97199672 10.41516035 4.00522930 12.48237856 11.87667145 8.81422034 10.47813093 8.35100546 9.07983941 4.91059357 1.72839946 0.83527734 2.78282789 8.58445672 8.93032576 9.57049898 6.05031885 8.22441754 5.44580283 10.21251620 6.19285696 9.30116349 NA 10.90312408 3.11541618 5.32256995 9.61743330 6.46678371 4.98214482 9.59543149 9.04197120 6.67180711 0.02800328 13.48311738 0.83527734 10.85886204 NA 9.09269346 6.16750245 8.06137389 8.88203986 13.330697 5.275879 8.727523 12.853903 10.483278 10.274098 12.574483 12.909208 9.319121 10.993555 12.847631 10.376955 9.488407 9.122028 -1.971997 7.563226 11.647941 11.191600 6.782838 9.243484 8.943083 8.423485 10.685926 7.541678 8.653659 11.034452 6.256769 6.192857 5.519803 7.329150 12.265235 10.398911 8.597806 8.139086 12.405636 6.860841 11.507365 10.117070 10.214374 9.596382 11.371692 10.133532 10.698386 9.562254 NA 9.670513 6.372247 11.119551 8.769418 10.687412 10.835708 7.374641 13.800393 10.173564 10.167822 12.960950 10.533762 9.859258 2.197865 TCGA-D8-A1JI 54 0 NA 577 breast stage iia t1c n1a mx female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 3.81477e-07 10.2656952 9.9233918 11.0265149 9.4476763 8.9845535 9.1727968 10.1435716 9.1679668 9.1737608 12.5683251 11.3040622 10.3088969 4.4587954 12.3702106 3.0853397 7.9612928 7.1804910 8.1416019 8.6117441 13.1181936 5.8353557 14.0149958 5.6031812 9.8954615 10.5891596 9.3740951 NA 7.7983299 10.5884368 1.2108875 5.6702965 5.7027185 NA 4.0521637 9.9938630 10.1708667 11.3084580 9.0321072 9.4651060 11.1023954 -1.3740750 10.2579887 13.5051505 6.7038399 9.7958273 12.0711758 10.8711578 2.8738329 -1.3740750 8.9296830 11.5608831 NA 10.7542188 2.6259017 5.1494626 4.2108642 10.2836673 11.6259023 9.9336724 11.2747092 12.4841747 8.3228696 10.2751584 10.7849126 10.7945744 10.5245037 4.7958293 11.5512713 9.7305010 NA 10.3474287 8.8231191 3.5833506 4.8926873 9.5440201 9.1650610 10.2127421 9.7226175 0.2108875 4.9113033 11.6343309 9.9635241 10.4741339 9.0214364 -0.4471700 0.4405400 0.4693000 0.0175020 0.0175020 0.0370760 0.0366530 0.0985600 -0.7783800 0.8282300 0.8282300 0.0013868 0.0095883 -0.8986300 0.0244080 1.7550000 -0.8807800 0.0000000 0.0000000 -0.9428500 0.0168450 -0.0027707 -0.0583270 -0.0583270 -0.0583270 -0.1126000 -0.1126000 -0.1153400 0.6559000 -0.4471700 -0.4471700 -0.4470100 0.0175020 0.0370760 0.0370760 0.0366530 0.0366530 0.0985600 -0.7783800 -0.8010100 0.0259520 0.0204830 -0.9134900 0.0369350 -0.8895500 -0.8895500 -0.0661180 -0.8986300 -0.8986300 -0.0526830 -0.9398300 -0.8989300 -0.8989300 0.0000000 0.0000000 0.0000000 -0.8784500 0.0168450 -0.0027707 -0.9092700 -0.0583270 -0.0583270 -0.2385100 -0.1126000 -0.1153400 0.6651200 0.0114330 -0.0661590 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 -0.230 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 -0.230 7.3124029 10.5570091 3.7133659 10.0036551 2.2488384 10.2774025 0.2108875 NA 8.5566398 6.1727975 NA 5.3807883 -0.3740750 9.7259074 9.3732560 4.9113033 13.5880301 9.1929077 10.4432857 10.2346192 10.0896617 8.0771132 10.0558320 1.2108875 9.0884045 9.6280140 3.2697513 NA 9.6038976 3.2697513 11.9558387 12.1065663 7.2625271 10.0729855 7.6454927 9.2634328 5.8738304 0.2108875 0.2108875 8.4039796 9.5440201 8.5085455 10.3202601 2.3263360 9.0041103 6.2841143 10.4015126 3.3263360 9.9878461 -1.3740750 10.8377906 0.9478531 4.5085427 9.7180186 7.1685087 0.6259250 8.5742696 7.3088969 4.8738280 NA 13.3741475 NA 10.3656829 NA 7.3401474 5.3807883 8.6273106 8.6088957 15.006262 3.625902 9.501652 12.370211 9.276954 10.687273 13.118194 13.160874 8.324607 10.382459 12.775094 10.004739 8.929683 8.639923 NA 7.820659 10.533169 10.911593 6.883290 8.433257 9.454832 8.645493 9.939432 6.394087 8.097578 11.304062 6.520721 1.433280 2.433253 6.211390 8.041644 9.052167 10.090958 8.497808 12.702050 3.018225 10.829217 11.308458 11.371156 9.320260 10.809538 8.714691 10.716676 8.529784 NA 8.175186 2.326336 10.754219 8.321131 10.691655 10.283667 6.765454 13.624581 10.808297 9.893859 13.174604 9.434867 9.532041 2.085323 TCGA-D8-A1JJ 54 0 NA 611 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.491228e-06 7.282743e-07 10.4904851 10.7052302 11.2736618 9.8129440 8.1989120 9.8851744 9.9586588 10.3922340 9.5036980 13.7955609 10.7708186 10.8923364 1.0419438 11.3183831 3.8784311 9.5519839 5.2679927 7.8820298 8.1217920 12.5682858 2.2345626 12.5312008 7.1770856 9.0555799 11.4414331 7.0322331 -0.7653761 11.9685399 11.6019861 1.4045217 7.3817765 7.9641918 -1.7656213 4.1414655 10.4160342 11.2463228 9.4651923 10.9620664 10.7524867 11.4507109 10.1604966 10.2398450 15.2017751 8.5342601 9.4476755 10.9612153 10.8853987 2.0419088 4.8927844 9.6837200 13.4012836 -0.7653761 11.6719333 6.2898529 6.1534345 6.2118513 10.7011577 11.7230392 10.5369247 12.5096774 13.4720054 8.0027554 11.1874945 10.3872238 11.7163708 11.3816172 4.5921221 12.5846127 11.2329855 -0.1804953 10.5615625 9.0330430 3.6618408 5.9280576 11.4784891 10.9332760 10.2426498 9.8288959 3.4440309 9.5354958 12.4839811 11.9812956 9.3220343 9.1482089 -0.248970 0.567390 0.574830 3.656900 0.190560 -0.480550 0.302820 -0.173790 0.416130 -0.867350 -0.867350 0.151990 0.052810 0.052099 -0.024765 -0.024765 -0.024765 0.037076 0.037076 0.155320 -0.236800 0.047457 -0.515380 -0.508150 0.638830 -0.163450 -0.517020 -0.201370 0.083198 -0.183200 -0.248970 0.000000 -0.473210 -0.311550 -0.530000 0.302820 0.302820 -0.165360 0.414510 0.453770 -0.524910 -0.292480 -0.867350 -0.517040 -0.517040 -0.517040 -0.405170 0.052099 0.070673 -0.051867 -0.024765 -0.025346 -0.025346 0.037076 0.037076 0.037076 0.027357 0.059223 0.023005 -0.184080 -0.515380 -0.508150 -0.155030 -0.163450 -0.201370 0.040892 0.068091 -0.496320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.459 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 0.002 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.459 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 0.002 -0.318 8.4561585 13.8354135 3.6939998 9.3773166 3.2345780 11.1565982 NA NA 8.1960212 7.9624918 -0.1804953 8.9315389 1.6939887 11.1595693 9.2520757 0.8195047 7.6418393 9.3548092 7.2429997 9.4138585 9.5795995 7.7021768 10.8718754 2.0419088 6.5199743 9.2604030 0.2346239 NA 11.0042026 1.5565030 12.9210172 12.4469157 7.1887678 10.2478941 9.4488904 9.0761358 5.1172130 1.0419438 -1.7656213 8.2104191 7.7364087 9.1103207 9.8779766 2.1414655 9.8441934 5.4729751 9.4488904 7.1354384 9.6728434 -0.7653761 11.2991457 2.8784311 3.5565030 9.4635883 6.3267477 2.3220435 9.3502654 8.2387916 8.4729759 1.4045217 13.9491925 -0.1804953 10.4004205 NA 8.1354379 3.5565030 8.6139497 8.6204336 12.916321 6.092552 8.171209 11.318383 10.524590 11.128062 12.568286 10.718891 9.160867 11.262477 13.159337 9.532634 9.683720 9.745830 1.819546 8.390654 11.508804 10.7970523 6.2513802 9.1638298 8.8446734 8.8167133 10.0503069 6.3586934 8.5417723 10.7708186 6.5832994 2.2345626 5.4729751 8.0358108 11.3045245 9.4789352 8.2485918 9.1967445 12.0375925 4.4633870 11.6028964 9.4651923 10.1902212 9.5354958 11.8031213 9.3963331 10.3103847 9.6970736 1.9350071 9.7043201 3.1414655 11.6719333 8.6868125 10.0968212 10.7011577 7.6816545 13.7401348 10.1545519 10.4302511 12.4083265 10.6233958 9.3026778 0.8195047 TCGA-D8-A1JK 90 0 NA 612 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 6 1 2 2 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.84945e-06 1.421869e-06 9.74665338 8.95699318 10.90452572 9.08907940 9.12029413 9.63437328 9.31633200 10.45990021 12.00410917 13.87641640 9.90774965 10.47688186 0.51540969 12.18653089 4.99656049 9.74344916 4.38990404 8.17126088 6.63782902 11.90774961 -1.06945188 8.42832164 5.42232384 9.72605480 10.62308514 6.38990060 2.10040584 10.46865856 11.77124758 1.51540969 8.56346476 8.09537645 NA 5.64471578 9.84634898 10.28471909 9.32921331 8.61871989 9.58421053 10.28912092 4.10039743 8.19021285 15.44962982 6.09859010 8.82528733 10.83623273 9.63610200 3.45403109 -0.06960327 8.32707429 11.02454734 NA 10.05975274 5.01793081 7.09537698 5.73782464 10.05200322 11.42956811 9.75701824 11.36900166 12.42545023 8.29021934 10.80813724 10.54441100 11.35042984 10.45941205 4.28801889 11.70587421 8.69368209 -0.06960327 10.96595610 8.98575201 2.10040584 5.10039322 9.04941077 9.65753926 9.98167858 9.28912092 2.73781653 9.55068946 13.33394778 11.32573601 10.13075523 9.30006697 -0.0256200 0.2012100 -0.0793430 -0.2981500 0.0615080 -0.2727200 0.6629000 -0.0408880 0.0992880 -0.0387140 0.4814800 0.2271500 0.3698600 -0.2987400 -0.2815600 0.0842090 0.0842090 0.0519560 0.0519560 -0.3219300 0.2585500 -0.0667880 -0.3067400 -0.3053400 0.1425100 -0.0321780 -0.2678600 0.0875340 2.2240000 -0.0073339 -0.0256200 0.0168450 -0.2981500 -0.3034500 -0.1653600 -0.8471500 -0.2860300 -0.0313590 0.2796300 0.0520990 0.4720400 1.4687000 -0.8855000 -0.1762600 -1.1110000 -0.2976800 0.1814700 -0.0374900 -0.3305200 -0.6497700 0.0842090 -0.2870300 0.4996000 0.0519560 0.0519560 -0.2933100 -0.1887300 0.2783700 -0.0488020 -0.0407520 -0.3290100 -0.3053400 0.0827650 -0.0321780 -0.3808900 -0.5706100 0.2032000 0.3396600 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.571 -0.398 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.127 0.000 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.571 -0.398 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.127 0.000 8.52479438 13.57133594 3.93047242 9.28361647 5.27031962 11.76632272 0.93047242 5.87298385 8.89191946 9.27476554 NA 8.32893562 8.09286124 11.37107935 8.85379703 0.93047242 4.88466629 8.19725602 8.24788243 10.63394072 8.86315701 7.00728522 11.84728219 2.51543493 8.01261895 10.80852060 0.51540969 -1.06945188 10.39756576 0.51540969 12.17111195 13.20623045 8.09537645 10.27254429 9.53872458 9.47156630 5.81311163 2.73781653 -0.06960327 NA 7.81311291 9.87225086 6.38990060 -1.06945188 9.62726338 8.09034112 10.12830062 6.80698647 9.65242321 6.46962879 11.86821129 4.45403109 3.17839595 9.79556112 6.69427987 7.34832184 9.31740990 8.58868128 8.59935462 6.94169675 13.82334448 1.51540969 11.29268749 NA 8.96526857 4.88466629 8.83886229 9.11782177 11.6676029 7.2388088 8.5958057 12.1865309 9.6786625 10.6421366 11.9077496 8.8388623 9.2158720 10.3398606 12.5261934 9.3324157 8.3270743 8.6378287 0.9304724 7.7538372 11.2504240 10.710599 7.465745 9.954910 8.166484 8.622213 10.000886 6.843360 5.305507 9.907750 4.574326 4.322786 6.178398 8.602753 12.507780 10.491758 8.622213 8.085288 8.215872 7.581521 9.820590 9.329213 10.813495 9.917023 10.816547 10.336143 9.664332 8.225090 1.515410 9.715930 8.211241 10.059753 6.837360 10.455990 10.052003 7.239355 13.448262 10.760985 10.284168 12.500918 10.861207 9.319563 2.630918 TCGA-D8-A1JL 72 0 NA 611 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.427581e-06 8.669932e-07 10.84280799 9.50630857 11.29406412 10.11547548 8.66807444 8.45848536 8.46847661 10.65894193 9.85675823 12.81928608 10.77840704 10.42809056 2.21555435 11.20020547 2.87452158 11.18180194 7.15745911 8.86925576 8.99554048 6.51066607 2.42706976 11.57450247 9.75226941 9.57727511 10.75104221 5.86850158 -1.03238869 11.99013769 9.37437116 2.13756910 8.28617746 8.37171175 -0.03238869 5.16730574 9.72001522 10.33641384 9.98792011 9.79973347 10.77156391 11.32628583 3.49119893 6.97886144 14.53676337 8.65230435 9.55962431 11.70657130 10.80289557 5.37702655 NA 10.18982579 11.77850745 NA 10.07354312 5.52987715 8.09304829 5.71582749 9.81077051 11.40265370 11.04678604 11.15761359 12.75329143 8.24608405 10.49119662 10.17706966 11.11547555 11.26569720 4.93341684 12.12955379 8.66373278 -2.03209363 10.77740278 10.09884850 2.82958575 6.51452944 11.28716561 11.76011992 11.05741609 10.62361249 -1.03238869 6.58234374 13.19457358 12.19607757 10.11674656 9.58418346 0.2645100 1.1024000 0.0840650 0.3039300 0.7120800 -0.0728080 0.6007000 1.7306000 0.4646400 0.6721500 0.6721500 0.6721500 1.7118000 0.0230050 -0.0180780 -0.0180780 -0.0180780 0.6916700 -0.5000600 1.6184000 0.6736300 0.0478360 -0.0161470 -0.0161470 -0.0161470 -0.3635200 0.1364300 0.1364300 -0.1968700 0.2645100 0.2535500 -0.5128000 -0.0331320 -0.0728080 -0.5308300 -0.4731100 -0.4979800 0.2942100 0.4646400 -0.1001300 1.4262000 0.1955800 -0.1542100 -0.0388500 -0.0388500 -0.0517210 -0.0953840 0.0230050 -0.5432000 -0.0180780 -0.0180780 0.2383900 0.0168450 0.2180600 0.0026357 0.0026357 -0.5031800 -0.1458000 0.0478360 -0.0788100 -0.0161470 -0.0161470 -0.4203600 -0.2933100 0.1364300 -0.1968700 -0.0365380 -0.5322600 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 0.259 -0.215 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 0.259 -0.215 9.15064954 13.38492677 1.77500839 9.09304803 3.64006558 11.03119826 2.72253160 4.96763436 9.21674804 9.09433901 9.78821244 8.56820734 5.81938462 10.60380611 8.55071755 3.74899785 7.78461849 10.37038020 10.47691476 9.44286141 9.23840880 7.51838170 12.49511163 3.64006558 8.85713845 9.41833038 3.17708860 NA 10.12624436 2.49118610 12.14240431 12.90298387 8.36851388 10.53083089 12.13755962 9.68188019 3.85027937 2.96762975 -0.03238869 8.60968627 7.18680360 7.69895395 7.13002581 4.03372252 8.22690730 5.60425817 10.41109623 6.00105684 10.08787252 4.44336795 11.45195406 4.64005980 4.23442468 10.14439058 6.88193008 4.88649650 9.43473059 9.08462824 6.41471737 6.73912441 12.30887545 2.05509151 10.97360998 2.61147930 10.14878682 5.49901670 8.54033498 8.62763055 12.446143 8.770151 8.179523 11.200205 11.044784 10.814496 6.510666 8.696406 9.532737 12.108065 13.674023 10.849513 10.189826 7.850277 4.427063 7.805263 10.760628 11.122611 5.640060 8.813125 9.449434 6.229730 9.481343 8.222663 5.427066 10.778407 8.887988 3.874522 6.102062 9.042766 12.808658 10.449686 7.978862 8.281651 10.329852 7.598812 10.322082 9.987920 10.259381 10.567547 11.779611 10.499016 10.990869 9.544591 1.668074 10.031104 7.314148 10.073543 8.018843 10.706246 9.810771 8.273696 13.606608 11.279950 10.952231 13.066818 10.164851 9.890962 3.668074 TCGA-D8-A1JM 59 0 NA 590 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 5 NA NA 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 4.508365e-07 8.9948289 9.0214903 10.7406214 9.4914964 7.8177243 9.7743881 9.6365306 10.4859486 9.6157962 13.4459506 12.7102147 10.7509375 NA 12.1970852 2.9965695 11.1240622 5.8118229 8.9516548 11.0208511 7.0476682 -0.1188836 11.4751001 9.8937111 8.7359550 11.7159526 4.0774823 -0.7039244 8.7524787 11.9661164 0.6180507 8.3608668 10.6881731 NA 2.5440402 9.9209195 11.9857946 9.7769143 9.5849901 9.9747242 11.2454037 -1.7036894 8.4254073 13.5280203 7.9412419 9.1687990 11.7242225 10.1537164 4.2030132 -0.1188836 9.3709345 8.8284799 -1.7036894 9.8152690 3.7879757 5.8810870 7.7799399 7.9826246 12.0860652 11.1566291 8.7307524 12.8284191 5.6970037 11.3365851 11.0306538 11.7200279 10.7123938 4.1290109 12.0649287 8.1305953 -0.7039244 10.2338658 10.4685517 4.2046963 3.7555606 11.2835658 9.0086510 10.1568232 9.0518463 1.2961343 8.1618575 12.5818875 9.8881138 10.2131232 9.6542259 0.03665300 0.74746000 0.68421000 -0.80161000 0.79374000 -0.73222000 0.03552400 -0.82627000 0.03312700 -0.82220000 3.65690000 1.49700000 0.01936300 0.01754400 0.03397200 0.01108000 0.01108000 3.01380000 0.00000000 -0.80036000 -0.80119000 0.01000600 0.02328600 -0.76458000 -0.78908000 0.00069327 0.00069327 -0.80360000 0.01056400 -0.79235000 0.03411300 -0.02972100 -0.80161000 -0.81082000 -0.73714000 -0.81343000 -0.80956000 -0.82627000 0.03312700 0.03312700 -0.80551000 0.03143600 -0.81663000 -0.79110000 -0.79110000 -0.05145100 -0.05496000 0.01754400 0.04755200 1.19030000 0.01108000 -0.80352000 -0.80352000 3.01380000 0.00000000 -0.82350000 -0.80036000 -0.80119000 -0.00747200 0.16880000 0.02328600 -0.76458000 0.04004400 -0.79168000 0.74081000 0.01810300 -0.76038000 0.06766100 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 -0.250 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 -0.250 7.5675873 10.4020326 6.0905401 8.0274433 1.6366826 9.8391559 -0.1188836 1.8810772 8.5792126 7.5321385 3.0510066 9.0929748 3.2503249 11.3104933 9.6431917 4.1541052 3.0510066 9.9865587 10.7952225 8.2283387 8.6596784 6.6270406 10.5637887 0.3492520 9.5505623 9.2525003 6.7959695 NA 8.7452726 3.0510066 12.8022457 12.6978703 5.5535110 10.2153598 8.2947145 10.4778976 6.0034831 0.8811164 -0.7039244 -1.7036894 8.4228284 9.2510473 8.3184917 7.6798284 10.5283682 5.3729382 10.7695762 5.4957975 10.8612262 2.2030132 9.7581151 3.7555606 11.1823922 10.4107872 6.0728197 3.1540971 9.6618997 5.9034553 5.1034809 3.1034809 14.5934703 -0.1188836 11.1509925 NA 9.2961240 5.3295470 7.3622130 6.5815260 8.661353 9.939078 7.631515 12.197085 9.427338 11.836131 7.047668 11.361540 9.275549 12.844043 12.943695 12.092874 9.370935 8.035905 2.383580 6.865979 10.364567 11.924570 5.982624 8.964122 9.273404 9.088914 10.602556 5.730751 9.264791 12.710215 9.362886 9.206017 7.688441 10.681693 11.814900 11.480999 7.966285 8.287646 9.532736 4.819684 11.590887 9.776914 10.011228 9.952996 11.849153 10.415714 11.196614 8.536915 7.375609 8.698923 4.505580 9.815269 7.116303 10.950313 7.982625 7.979399 14.719109 10.514687 10.164947 12.909683 10.342907 9.371603 1.618051 TCGA-D8-A1JN 80 0 NA 620 breast stage iiic t3 n3a mx female 2010 NA no infiltrating lobular carcinoma 11 white not hispanic or latino NA NA 2 2 NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.849854e-06 1.424927e-06 9.58091748 9.45556416 11.82874232 9.00713690 7.88437691 9.16783107 11.23388135 9.52924528 8.25850149 8.91722019 10.99436801 10.16522911 1.63645062 12.70824702 2.75193497 6.56718643 7.18077047 8.24377998 10.63597979 13.96540485 2.63645062 14.04380578 7.46087769 9.14610582 11.62323963 7.35526740 NA 7.16001156 9.21890513 NA 9.22266379 6.40021513 NA 3.57504604 10.34265774 10.37228754 8.90010995 11.77258618 11.03269748 11.73601647 6.90323595 11.52924528 12.77258618 9.07160582 11.08249889 10.22578850 8.73798752 3.75192426 6.35526828 8.55332402 12.84163182 2.37342549 10.94440922 2.75193497 4.98222241 2.63645062 10.59258364 12.01112674 10.34150581 11.10541284 12.44661942 6.62134275 9.85803665 10.12310357 11.95837759 10.98812489 4.44380554 12.21968898 10.77514794 0.05144171 9.63174547 9.07524140 4.01079774 4.33689033 9.94933240 10.34438369 9.35069503 9.75105945 1.85885630 10.17625457 13.13563099 10.90752336 10.23760124 9.47879975 0.0335490 0.9174300 0.9174300 -0.0119190 -0.0119190 -0.0083005 0.0379240 -0.0083005 -0.0083005 -0.0060904 -0.0060904 -0.0060904 0.0579390 0.0239170 0.0144700 0.0088545 0.0088545 0.0118180 0.0118180 -0.0197930 0.0224440 0.0603650 -0.8785900 -0.8785900 -0.8785900 0.1218200 0.1218200 0.1218200 0.0996630 0.0335490 0.0335490 0.0026357 -0.0119190 -0.0083005 -0.0469890 -0.0157410 -0.0189950 -0.0083005 -0.0083005 -0.0265650 0.0084743 0.0000000 -0.0060904 0.0202030 0.0202030 0.0202030 0.1475600 0.0239170 0.0239170 0.0144700 0.0088545 0.0296730 0.0803120 0.0118180 0.0118180 0.0118180 -0.0197930 0.0224440 0.0603650 -0.8954200 -0.8785900 -0.8785900 -0.9326000 0.1218200 0.1218200 0.0599370 0.0448570 -0.8720500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.04866669 11.38603960 2.75193497 8.79295391 NA 11.26610965 -0.94841908 NA 8.84102050 6.13894959 NA 8.43086523 NA 10.05148698 9.65974175 1.63645062 6.22141118 9.92030953 10.85036376 9.92646828 10.19304492 8.71682289 9.19359411 3.05149392 10.61372944 8.46511496 3.29942051 NA 8.67719567 0.63645062 13.18519113 12.45449900 6.75884547 9.94630481 8.66251173 9.01148893 3.90946591 -0.94841908 1.37339765 -0.94841908 7.85561789 9.14159934 12.02033374 4.60607499 8.97951666 7.52722050 9.52011105 3.22141312 8.66251173 NA 12.12613022 3.51092395 3.51092395 10.26409279 7.35055736 2.51091130 7.98812511 7.36889928 6.22141118 NA 14.24916443 0.05144171 9.70701775 NA 7.35982598 5.02876804 8.53731626 9.31475611 12.6750656 3.8063756 9.4944304 12.7082470 10.8320267 11.6258440 13.9654049 9.0129368 9.3445678 10.7287662 12.9017715 8.5652144 8.5533240 8.4944304 -0.9484191 6.8588414 10.2069377 11.036617 6.417809 9.263375 8.141599 6.231396 10.924616 5.680845 8.243780 10.994368 4.806376 8.128303 4.806376 5.219207 7.090406 10.783230 6.819671 8.895408 9.245012 4.934130 12.741954 8.900110 11.065159 10.252998 11.864867 8.531267 10.629388 8.679021 5.751927 10.075221 4.443806 10.944409 2.751935 10.807209 10.592584 6.928004 14.336200 10.800937 11.311819 12.549713 10.707465 10.034481 NA TCGA-D8-A1JP 73 0 NA 639 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 6 NA NA 1 2 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.60098e-06 6.935946e-07 10.1200722 9.7968983 11.7035812 8.5419426 9.1840132 9.0255092 10.5668254 10.1774458 10.3001316 12.4443645 10.8177793 10.3289702 4.1514854 12.2537782 3.4014666 10.1569561 5.6002400 8.1490444 9.6528364 12.9097065 3.4655958 13.4776091 4.5567421 8.9999811 11.3577717 4.6699508 -1.0579923 9.8443824 10.2973811 1.7494055 8.4596992 7.4218099 0.9420077 3.4655958 9.4763329 10.1624082 9.2594425 10.7725451 10.7697696 10.6805445 7.1169552 11.8944072 14.3150990 6.8681484 10.3865220 10.3808217 10.7550094 4.8489183 4.2995817 9.2503690 10.5617914 NA 10.9381503 6.2995817 6.6215098 5.6834972 10.3844551 12.1763983 9.5659115 11.6389975 12.5655685 8.1636170 11.3947860 10.9373236 11.2676165 10.4086162 3.7493841 12.2666324 11.4515575 5.8845442 10.1496544 9.3651459 3.2646865 6.0505539 10.4631395 10.1798375 10.5147301 10.6813886 7.1563491 8.4889243 12.5166234 11.9425582 9.9377971 9.7534046 -0.6192000 0.0269350 0.1237300 -0.0226060 0.4184800 1.0646000 0.0161460 0.0220240 1.4086000 -0.5967200 -0.5967200 1.5490000 0.0484040 0.0303100 0.0647970 0.0585090 0.0585090 0.0256710 1.1449000 0.0181030 -0.1649700 1.1736000 -0.5933100 0.0518140 0.0518140 0.0519560 0.0519560 0.1162400 0.2339500 -0.5732800 -0.6192000 -0.5943900 -0.6141200 0.0910100 0.7132100 -0.6374600 -0.0378980 -0.6207300 1.4086000 0.9227000 0.1898000 0.0038854 -0.6174800 0.0448570 0.0448570 0.0448570 0.0774300 0.0303100 -0.6075700 -0.6070000 0.0585090 -0.6197800 0.0397610 0.0256710 0.0109820 0.0109820 -0.6218800 -0.1649700 -0.6137300 -0.5834300 -0.5933100 0.0518140 -0.6131600 0.0519560 -0.5623600 0.5958400 -0.0402090 -0.4470600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.229 0.229 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.891 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 -0.278 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.229 0.229 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.891 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 -0.278 9.30287695 13.58588613 7.13678712 10.01416250 2.26396585 11.48070388 -0.05799229 NA 8.39941081 7.91069669 0.94200771 9.18709543 2.26396585 10.25944257 9.26508475 3.80000942 7.84591151 9.69273684 10.17864207 9.21582563 9.67429062 7.65627540 11.47292393 3.98642004 8.23665046 9.90058262 3.69691747 -1.05799229 9.94695261 3.74938409 13.32789233 11.77985496 8.30616470 10.51283437 8.76220894 9.54287207 5.74938409 3.18995104 NA 6.14170254 8.15634908 8.77491979 10.49037027 3.40146664 9.21735142 6.53448654 10.11007517 6.54935959 9.68518136 NA 11.31788390 3.89622340 4.55674208 9.75608357 6.05274844 4.18995894 9.88966686 8.17804432 5.29958170 NA 13.14484249 -0.05799229 10.27630322 NA 6.43388250 5.52699212 9.21699049 8.89913212 10.700778 7.642470 9.780446 12.253778 10.229742 10.006773 12.909707 13.195804 8.916444 10.182821 12.463385 11.745556 9.250369 7.975453 NA 7.836848 10.880139 11.118515 7.933552 8.380822 9.368295 9.241398 10.358949 7.281880 5.227433 10.817779 8.940620 3.401467 8.126905 7.729998 11.017843 10.212909 8.459424 8.257179 9.299582 6.457731 12.071471 9.259442 10.190551 9.799233 12.515914 10.101271 10.295177 8.156349 6.930715 9.093541 5.131853 10.938150 8.582275 11.313137 10.384455 6.812394 13.768231 9.729933 10.042692 12.888205 10.922527 9.742121 2.263966 TCGA-D8-A1JS 77 0 NA 371 breast stage ia t1c n0 m0 female 2010 NA no other specify 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 9.11909208 7.83562727 10.94110213 7.56481713 9.37428117 9.03094792 10.33584487 9.05831081 9.14567083 12.29709777 11.42788316 9.92272963 -1.62994734 13.23327894 1.69198075 8.34160421 6.66468194 7.33006266 8.98660946 13.62401884 2.27694325 13.94660398 5.47858358 10.70783854 10.71518854 6.07742033 -0.62994734 8.31550464 12.64916329 NA 9.53433907 4.51980606 NA 2.27694325 9.27544758 9.19422375 10.69985689 10.14813767 9.63274279 10.42568200 4.32425617 10.65690711 13.58107431 8.80164176 10.23926878 11.01233800 9.78474591 1.69198075 4.59887730 6.90144256 10.45652855 NA 10.81015114 1.82948427 3.45752863 1.82948427 9.79265106 11.62921535 10.42160938 11.01616924 12.41274597 8.46677556 10.34160410 10.40906873 10.79396438 10.23926878 3.86191567 11.04557662 8.67269936 -0.04498484 10.25766198 8.32425707 1.69340890 3.37006661 10.90897701 9.14895901 10.30190608 8.20926424 1.82948427 10.72541168 11.75376489 10.62243039 9.62213457 9.16040897 0.0000000 0.8072700 0.8239200 -0.0053992 -0.0053992 -0.0048461 -0.0034627 -0.0073758 -0.0073758 0.0015255 0.0015255 0.0015255 0.0058309 0.0058309 0.0034687 0.0034687 0.0034687 0.0104240 -0.0050370 -0.0027707 0.0015255 0.0109820 0.0055529 0.0055529 0.0055529 0.0029133 0.0029133 0.0029133 0.0136320 0.0000000 0.0000000 0.0016642 -0.0053992 -0.0048461 -0.0048461 -0.0034627 -0.0034627 -0.0041546 -0.0073758 -0.0073758 -0.0008316 -0.0008316 0.0015255 0.0027745 0.0027745 0.0027745 0.0027745 0.0058309 0.0058309 0.0034687 0.0034687 0.0034687 0.0034687 -0.0050370 -0.0050370 -0.0050370 -0.0027707 0.0015255 0.0109820 -0.9131100 0.0055529 0.0055529 0.0109820 0.0029133 0.0029133 0.0136320 0.0052749 0.0174040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.3812886 10.6012817 2.9550152 8.2618443 0.3700527 10.4314318 NA NA 9.2777024 6.3868696 NA 4.3924273 NA 10.5067314 9.3096398 -0.6299473 2.4575155 8.7243099 11.9748454 13.6077187 9.9320740 6.5499694 10.5293012 1.3700527 9.3502002 9.6766919 4.2769507 -1.6299473 10.3394471 2.4575155 13.8302925 13.0970238 6.4199096 10.1039234 6.9053365 9.9540836 -0.6299473 2.6179802 -0.6299473 4.9246510 10.2147663 11.3197050 11.6027813 2.6919808 8.7169621 7.9208072 10.4890017 5.5795151 9.6577729 NA 12.4726105 0.3700527 3.4993484 9.8955521 7.3038985 NA 7.3416042 6.1249484 8.1497801 1.8294843 13.9580139 -0.6299473 10.1009552 -1.6299473 8.4628176 3.6554663 6.7879130 9.9838501 12.68195363 3.53999006 9.25423121 13.23327894 10.19660913 11.37392982 13.62401884 11.16488255 9.21931714 10.00985352 12.93635252 7.49676512 6.90144256 10.21044512 -0.04498484 8.17580451 10.38721701 10.24003998 5.70991093 9.08430615 8.61798825 6.81300385 9.35662077 5.42534181 7.23424647 11.42788316 5.26487792 6.46281797 5.48900015 5.34183279 7.22180943 8.93801667 6.51471879 9.45354001 9.19023952 1.82948427 9.45606400 10.69985689 10.49611966 10.74292563 10.53150740 7.59164800 10.10307585 8.32571066 NA 9.73843617 NA 10.81015114 2.17740758 10.65604072 9.79265106 6.45752370 13.92946756 11.27732687 10.96601733 12.68159605 10.15101045 9.08258764 -0.04498484 TCGA-D8-A1JT 70 0 NA 405 breast stage iia t2 n0 m0 female 2010 NA no other specify 0 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 7.282743e-07 2.427581e-07 11.1598518 10.1498651 11.3156243 8.4991383 10.1273791 9.2375281 8.9467557 8.2981574 8.0789460 13.4037315 11.6531438 10.4612417 1.0597706 11.8414637 2.4223137 5.8890232 5.2065924 8.7118294 9.4354127 13.5621583 0.5743438 15.1093096 3.6786579 9.2947411 11.0195477 7.1041469 NA 4.9938645 10.4569689 NA 6.7601930 7.8411127 NA 1.5743438 9.6132449 12.3333818 10.1453200 11.9742446 10.0537019 10.7245809 NA 11.9040101 13.2291409 7.2764567 9.1464577 9.8935464 11.7101634 3.0597533 -1.7475843 8.9186218 10.7087521 -1.7475843 10.8115358 5.7362125 5.3504301 3.2524005 10.3178139 11.6427011 10.3188234 12.8691189 12.8304756 8.8326562 11.8622690 11.2170996 11.7465033 10.2861649 3.0072852 12.3602687 12.3601052 NA 10.1134847 10.1637898 1.2577951 4.9528367 9.4354127 9.8213040 10.5053588 11.5504603 2.4223137 6.0852887 12.8367144 11.4099026 9.6948229 8.3791024 -0.00152430 0.77003000 1.49380000 -0.02109800 -0.02109800 0.75891000 0.77252000 -0.00553750 -0.88144000 0.49320000 0.50116000 2.91230000 0.00180300 -0.00055444 -0.01367700 -0.01367700 -0.01367700 0.02806000 -0.00493430 -0.64284000 0.00000000 0.00861350 0.81591000 0.81591000 0.81591000 0.05447200 0.05447200 0.06852200 0.80480000 -0.00152430 -0.00152430 -0.00971670 -0.02109800 0.79007000 0.75204000 0.77252000 0.77252000 -0.00553750 -0.88144000 -0.02780800 -0.01656700 -0.01656700 -0.89634000 0.78022000 0.78022000 0.78022000 0.78022000 -0.00055444 -0.00055444 -0.01367700 -0.01367700 -0.01367700 -0.01367700 0.00513590 -0.00493430 -0.00493430 -0.64284000 0.00000000 0.00861350 -0.90179000 -0.84915000 0.81591000 0.77868000 0.05447200 0.06852200 0.80480000 -0.00415460 0.04004400 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 0.193 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 0.193 5.7522428 9.3855400 9.3996026 7.1041469 0.8373782 10.2974748 -0.1626218 NA 7.8671076 7.6077490 NA 5.9666427 -1.7475843 10.9079285 8.9571659 NA 3.5003304 9.8597281 10.1422820 10.4347921 9.9177204 7.7720341 9.9012047 1.5743438 9.0056144 8.7362135 -0.1626218 NA 10.0880535 2.5743195 12.0416257 11.8042262 7.1919771 10.0982798 11.7669886 9.1720059 -0.7475843 3.2065963 NA 4.0337578 6.7482532 5.6011260 10.7569685 1.4223407 2.7934173 6.0725775 9.9358311 7.7462530 10.1879311 NA 10.1403799 1.4223407 3.6786579 10.1517282 5.2078733 -1.7475843 6.4763995 7.7680976 2.5003177 NA 13.0947481 NA 9.0837051 NA 7.8031444 4.4618494 8.9734971 7.9441410 14.086894 4.678664 9.944141 11.841464 9.369391 11.378296 13.562158 12.483694 9.053298 10.352732 13.554251 9.436033 8.918622 9.199304 -1.747584 7.678663 11.094945 10.296450 6.899856 9.728638 8.252398 9.230393 9.944154 2.500318 7.323860 11.653144 7.153264 NA 8.663909 7.676480 9.994286 9.725596 11.301736 6.609950 12.457656 3.252401 13.473246 10.145320 11.241615 10.190507 11.784023 8.592248 10.494381 8.461851 NA 8.285477 2.252385 10.811536 6.263624 10.391309 10.317814 7.004143 12.442145 10.586950 10.994497 12.480239 9.063773 10.026361 1.252416 TCGA-D8-A1JU 51 0 NA 447 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 1.733986e-07 10.91766708 10.23137036 11.23623614 9.61149609 8.41819248 9.10283709 10.10570322 9.70787882 10.18798358 12.35515841 10.89843398 10.39929448 2.71378378 12.79588040 3.81332972 10.13285197 5.96533409 8.55149795 9.30660767 12.55726720 -0.09357114 12.82939581 5.28726173 9.68210500 10.16853461 7.51130199 NA 12.06504845 8.00095716 4.07636241 8.80428529 7.81132524 NA 5.08966339 9.99124816 10.17283601 10.17478690 10.13846099 10.26655536 10.71486780 1.78089798 10.71137746 14.37034730 8.03738771 10.09213289 11.17537165 11.14862154 5.34384483 3.49140419 9.61437416 11.65965658 NA 11.36723700 7.48889575 7.02538101 5.67902963 10.62981631 11.62682659 10.35799442 12.21960629 12.87318558 8.40362648 11.14245403 10.95399094 11.25829926 10.71647585 4.87606504 12.31317631 10.96420598 2.02190608 10.58650628 9.20106064 3.49421078 6.04939770 10.04982310 10.17361668 9.94215540 9.97879582 5.08966339 8.99036241 13.12742267 13.12787590 9.72235673 9.23436671 -0.0237030 0.4520700 0.4520700 0.0862330 0.0806010 -0.0184900 0.0962340 -0.0091286 -0.0091286 0.2007600 0.2007600 0.1989800 -0.0002298 0.0019418 -0.0018014 -0.0018014 -0.0018014 -0.0147780 -0.0138870 0.0895610 0.0777180 0.0953630 -0.0055375 -0.0055375 -0.0055375 0.0712480 0.5081100 0.5081100 -0.0077482 -0.0237030 -0.0237030 -0.0186280 0.0862330 -0.0200010 -0.0184900 0.0962340 0.0962340 -0.0091286 -0.0091286 -0.0091286 0.0975420 -0.3541900 0.2007600 0.0000000 -0.0018052 -0.0018052 -0.0012473 0.0019418 0.0019418 -0.0018014 -0.0018014 -0.0018014 -0.0018014 -0.0147780 -0.0124380 -0.0124380 0.0895610 0.0777180 0.0953630 -0.3543000 -0.0055375 -0.0055375 0.0920250 0.0712480 0.5081100 -0.0077482 0.0910100 -0.0165670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 0.000 9.4352196 13.6574608 6.9653329 10.7298071 2.8450484 10.5106842 1.4913914 0.6433945 8.0679914 9.7911191 -0.6785336 8.6374422 4.4712265 10.0223505 9.0780336 1.3214664 11.2753100 9.5094478 11.5964378 9.6218299 9.3164105 8.2551679 11.5043372 3.5309322 8.6646631 9.8775042 5.4089394 NA 10.4973387 3.2756776 13.0959555 11.9239442 9.2010606 10.6160980 8.5236012 9.5616723 2.9653410 2.2283570 0.6433945 2.7809190 8.5260485 8.9814731 9.6867062 7.4115898 7.3939584 5.5788663 10.3566201 5.6434060 9.4195094 NA 11.4761373 3.6068804 4.4712265 9.1987461 5.2021630 4.0763624 9.4520478 9.7623465 6.5502958 NA 13.8121089 1.3214664 10.3686012 NA 8.4365208 6.6921649 7.9921334 9.5211497 11.476528 3.679030 8.379469 12.795880 10.322182 10.534278 12.557267 11.649170 8.996296 10.512845 13.363906 9.396956 9.614374 10.754541 NA 7.776805 10.831252 11.397959 6.841114 9.014093 8.374045 7.343845 10.132406 6.419510 7.018445 10.898434 6.821324 4.387569 3.780908 4.693208 12.284283 10.545177 8.430002 8.419509 12.298847 7.201060 11.711857 10.174787 10.558687 9.299473 10.964657 9.937107 9.982810 9.343845 -1.678534 9.597206 6.007978 11.367237 8.446891 10.661606 10.629816 7.191842 14.262319 10.121164 10.964206 12.943472 10.481979 9.929732 3.321481 TCGA-D8-A1X5 81 0 NA 565 breast stage iiic t2 n3a mx female 2010 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 4 1 NA NA 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 9.01673e-07 5.895554e-07 10.5559310 10.2049632 11.5673851 10.0514779 8.9571023 9.1489555 10.0860596 9.4006718 9.3368801 13.7068673 10.6482561 10.3393117 NA 15.4143301 4.0514765 8.5005177 6.2547622 8.1277308 9.3133252 12.7489942 -0.1964423 13.3891584 5.5177953 9.3511775 11.7904590 6.3885133 1.1254527 10.0924164 12.0850457 2.8910108 7.9809701 7.3271125 NA 5.1434016 10.0556244 9.8969679 9.8923385 10.3903901 10.5369895 11.4262886 NA 11.0035294 15.1339246 8.5852052 9.4671085 11.5492247 12.2839619 3.1254858 0.3884651 10.1605524 10.4251443 NA 10.8963075 5.4034620 6.9634221 5.4900502 10.2588775 11.3130779 10.3595773 11.3120879 13.2048965 9.3542972 10.6816012 10.1768233 11.6551042 10.7123182 5.8369744 12.9365319 11.0761801 NA 10.2521829 9.6109052 3.2688685 6.2792837 10.5840901 9.7979037 10.4196396 11.2604181 3.5584391 7.7548347 12.2666915 11.6787237 9.2893796 9.1589015 -0.3898800 0.7305700 1.4424000 -0.4045100 0.7535600 -0.3915200 -0.3882800 0.6538700 0.4042700 -0.8028500 -0.8272600 1.1403000 0.4087800 -0.3943000 0.0139140 0.7753500 2.8269000 -0.3939700 -0.3927000 -0.3972000 0.3966200 0.0112610 -0.3924100 3.6569000 0.0485460 -0.0332690 -0.0332690 0.3551200 2.1977000 -0.3985700 0.6632700 -0.0033243 -0.4045100 0.0231450 0.0000000 0.0203430 0.0203430 0.6538700 0.4042700 0.4042700 0.0057210 -0.4152000 -0.0023817 -0.4023000 -0.3900700 -0.3900700 -0.4007000 -0.3943000 -0.3943000 0.0139140 0.0324220 -0.3985300 -0.3985300 -0.3939700 -0.3927000 0.1764800 -0.3988400 0.3966200 0.0112610 -0.3821300 -0.3924100 -0.3824600 -0.3886200 -0.1110100 -0.0332690 0.4660500 0.0094491 -0.3835800 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 0.298 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 0.298 8.4071768 13.1201147 6.6739154 9.9865654 1.6108890 10.7559276 -0.1964423 NA 7.3847509 7.6953341 NA 8.8870296 0.3884651 10.9822152 9.1004666 2.5039847 7.8883585 9.9871857 7.2086919 12.2597764 9.4238252 7.4546020 10.0849008 2.7104373 8.3581391 9.1969407 0.8035577 4.9120750 10.6080848 1.9734643 11.6968518 12.2538595 6.7693341 10.6177322 8.4237702 9.5832697 5.7922359 1.3885202 0.8035577 2.2629743 8.8843678 9.5955272 11.6026296 1.3885202 8.4027567 5.7922359 10.0371700 7.3504451 10.4237702 NA 11.4595282 2.8910108 6.2873670 8.9659669 4.4827515 6.3192494 9.1004666 8.6364405 7.7635523 -1.1966076 12.6884840 NA 10.5617736 -1.1966076 5.8259179 4.0889557 7.1389404 9.8286900 13.6229466 5.9015813 8.1764155 15.4143301 9.4043925 11.2737007 12.7489942 12.5303007 11.1280122 10.5567002 12.9478899 9.3514088 10.1605524 9.1118894 0.3884651 7.2256152 12.4033470 10.605663 7.022718 8.528064 6.440175 8.204430 9.494002 7.388512 6.403464 10.648256 6.958368 2.803558 3.610901 7.832009 10.865259 9.617332 8.825918 9.369604 11.448308 6.853399 12.699505 9.892339 10.325641 10.118134 11.978476 9.388513 10.428803 9.231910 8.095872 8.768426 7.056216 10.896308 7.998307 9.983155 10.258878 8.329071 13.841756 9.887030 10.133347 11.332981 9.731328 9.542487 2.891011 TCGA-D8-A1X6 80 0 NA 541 breast stage iiia t3 n2a mx female 2010 NA no infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 5 3 NA NA 1 1 4 5 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.387189e-07 10.0956750 10.2682512 11.1480283 8.7563188 8.8597646 8.6273019 9.3851510 9.0756915 6.7807930 12.5292821 11.3104550 10.9501604 1.1991855 12.3462380 3.0736489 9.2514405 5.8996131 8.1167120 9.8163357 13.0575008 4.5528136 14.5189719 3.4215734 9.9802061 11.7976405 3.8366008 -1.9708652 11.8080339 10.7229541 1.0292762 8.5972056 7.3556788 NA 2.4215599 9.3296019 10.3607262 11.5147014 10.8200052 9.7761835 10.6319482 1.1991855 10.9301162 14.1200648 8.0885535 9.5881483 11.4719338 10.5049828 3.0292408 NA 8.5876703 10.6963609 -0.3857142 10.8874247 8.4597021 6.7740833 4.4042901 10.4383751 11.7552546 11.0814778 10.5960170 12.6348447 7.2983761 10.8674685 10.5435763 10.5642817 10.7874726 3.6439601 11.9741445 12.3129889 -1.9708652 10.6506145 10.1472171 2.6178157 7.0845320 10.6314843 10.0657664 10.2933988 10.2931055 0.3511760 5.3053723 11.9365156 11.7290387 9.3477923 8.9776165 0.0086135 0.0086135 0.0086135 0.0759910 0.0698120 -0.0148280 0.7199900 -0.0065050 -0.0065050 0.9534500 1.8349000 2.1896000 0.0120970 0.0120970 -0.3496600 -0.3496600 -0.3496600 0.0000000 0.0000000 -0.3580600 0.0141900 0.0332670 0.0279190 0.0279190 0.0279190 0.1017600 0.1017600 0.1017600 0.0343950 0.0086135 0.0086135 -0.3315600 0.0759910 -0.0148280 -0.0111980 0.7199900 0.7199900 -0.0065050 -0.0065050 -0.0065050 -0.0020784 -0.0020784 -0.9913700 -0.3485400 -0.3485400 -0.3485400 -0.3198400 0.0120970 0.0120970 -0.3496600 -0.3496600 -0.3496600 -0.3366400 0.0000000 0.0000000 0.0000000 -0.3582600 0.0141900 0.0245730 -0.7219900 0.0279190 0.0279190 0.0134920 0.1017600 0.1017600 0.0343950 -0.3421700 0.0432990 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.349 -0.349 0.000 0.000 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.349 -0.349 0.000 0.000 7.94662151 11.22631248 8.39228908 9.28073180 2.10564456 10.53208119 1.19918548 NA 8.40537466 4.84942887 NA 5.42156668 1.19918548 10.43012885 9.37076826 -0.97086520 7.01793415 8.41618950 12.03846568 10.50877704 9.49379522 7.03487378 9.15530854 4.50498261 10.92160250 9.40645993 2.78412703 NA 11.17677236 2.93613850 13.00245347 11.95276261 6.03487378 10.47115606 10.25957015 9.28013998 0.02927618 0.83657052 -0.97086520 7.95998687 8.95702744 9.48457662 9.76903001 1.83661091 5.89083334 7.57421355 10.69035939 6.45551464 9.56014346 NA 8.55965585 2.02924084 2.88723280 9.72718565 6.42576811 -0.38571419 9.54149606 8.27480210 3.75717263 -1.97086520 13.88209585 -0.97086520 10.27599002 -1.97086520 5.80403548 4.09534216 8.07500896 9.31580712 14.079489 5.790801 9.804448 12.346238 9.698134 11.025723 13.057501 11.976886 9.303628 10.628930 12.720339 9.804036 8.587670 8.704324 1.029276 7.799087 10.122997 10.624740 8.057156 8.502955 8.645798 9.408086 9.502884 7.463877 7.642118 11.310455 6.408627 1.936139 7.777442 7.450452 7.818783 9.696804 10.228449 8.526103 10.799913 3.959983 11.326464 11.514701 10.528099 9.376317 11.618432 8.913420 9.996836 8.580958 NA 8.690707 2.116697 10.887425 5.377977 10.399664 10.438375 6.858972 14.108356 10.914755 10.225544 12.428527 9.565982 9.360166 0.351176 TCGA-D8-A1X7 40 0 NA 509 breast stage iia t2 n0 mx female 2010 NA no other specify 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.040392e-07 10.6729038 10.5214385 11.5234535 10.2510725 8.9115265 9.3903732 10.1190712 10.7483560 9.2099580 14.1007439 11.1035303 11.4537352 1.4537546 10.7924716 4.9391607 9.0197892 5.9327061 8.2059486 9.3743857 13.5969271 1.8322419 13.1559512 1.7167715 8.7349328 10.6921400 7.7556888 0.7167715 10.4370139 9.7497337 0.1318528 8.1289867 10.3567132 NA 4.4716557 9.9045341 11.2557668 10.0805394 11.5313521 10.2780576 11.6919011 15.5632721 12.4282932 14.7517548 7.5284760 9.6854269 11.0115818 11.7445604 4.1541781 -0.8682788 9.2179434 10.7389062 -0.2833163 11.5652621 5.3509745 5.5994130 3.8866965 10.9725850 11.8128259 10.2694387 11.8701105 13.0820440 9.0037124 10.9509883 10.9410286 11.7134785 11.4344461 5.3891951 12.6597117 12.0920806 -0.8682788 9.8858595 9.1569467 1.5938796 5.3797353 10.0167407 11.2126247 10.4469567 9.8921112 5.2610907 4.3216323 13.4019564 11.5709887 9.7158301 8.8235507 1.42780000 1.77220000 1.78370000 0.00069327 0.00069327 0.00485790 0.00319100 -0.01090700 0.00291330 -0.00263220 -0.00263220 -0.00263220 -0.00774820 -0.00774820 -0.01147300 -0.01147300 -0.01147300 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.01615400 -0.02205800 -0.02205800 0.62934000 -0.03299600 -0.03299600 -0.03299600 -0.01725400 -0.02041200 -0.00235530 0.00458000 0.00069327 0.00112070 0.00298770 0.00198020 0.00020901 -0.01090700 0.00291330 0.00291330 -0.00180140 -0.01789200 -0.00263220 -0.01298900 -0.01298900 -0.01298900 -0.01298900 -0.00774820 -0.00774820 -0.01147300 -0.01147300 0.00180300 -0.01962500 -0.00664320 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.01734100 0.65424000 -0.74412000 -0.02903800 0.00013863 -0.03299600 -0.03299600 -0.01725400 -0.00733390 -0.02329200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8916950 12.4898401 5.3509745 8.9717982 3.0454080 10.4472398 2.4537283 -1.8682788 8.3497647 6.9646967 NA 7.9857406 1.3017047 10.3588213 9.1576387 -1.8682788 6.1597139 9.7895721 10.4480886 10.0375702 10.4268987 8.1133744 11.0400120 3.0860024 9.4148955 9.4119979 1.5912486 NA 11.1657463 2.5912486 12.3738647 12.8250218 7.6075404 10.7729557 7.5809557 8.8174320 1.3017047 1.5912486 0.4537546 2.7167715 8.4537353 9.9086514 9.1652301 3.0860024 8.9648237 5.4172078 9.5353518 7.0052518 9.7007133 NA 10.8516237 2.3797318 9.9499898 9.7206013 6.7182342 3.3412599 8.7747614 8.2166154 4.2815573 NA 13.3081361 1.9391513 10.9739610 NA 8.9383567 5.3117174 7.7446758 8.6835154 13.3544424 4.8460520 9.2166154 10.7924716 10.5821808 11.2347670 13.5969271 12.2710387 9.0983127 11.2703989 13.6222820 8.9670680 9.2179434 8.5559733 -0.8682788 7.8059992 11.6157488 10.8846059 8.2285224 9.2751903 7.4241285 9.1911515 10.1454858 6.4537349 9.9074174 11.1035303 6.0386974 -0.8682788 7.1679811 7.7408932 13.0491792 8.2416376 7.3868359 8.0446963 12.6149931 4.7756616 10.7237665 10.0805394 10.2281929 9.6665963 11.8279053 9.4910077 10.5380121 9.8361432 NA 9.4947592 5.1204930 11.5652621 7.0947027 9.7381152 10.9725850 7.4333033 12.9275424 10.0458185 10.3806242 12.7867228 9.9391621 9.6656235 -0.2833163 TCGA-D8-A1X8 62 0 NA 783 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating lobular carcinoma 9 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5.201959e-07 2.774378e-07 10.42891610 10.19196009 11.32410048 10.03230352 8.68828179 9.59813776 10.26692226 9.71311342 9.55849419 9.80324496 10.64190326 10.75304104 1.34845906 13.18812750 3.90301898 8.38185482 7.26431123 8.64305238 9.07890172 13.59305560 2.87200131 13.84222453 8.59991396 9.42718292 11.04278953 8.67710650 -0.06657844 9.97002563 9.56335779 2.04886391 7.92018431 7.11330356 NA 5.16860995 9.70543368 10.55055547 11.45368537 10.96543987 10.48862235 11.84366208 3.10331299 11.52117164 14.50313108 9.22588439 9.97322710 12.27491293 11.36489171 5.32571021 3.96314116 9.27695000 13.33893450 NA 11.73980946 6.28506925 6.18132124 4.70598343 11.03733754 11.81972577 10.48638334 11.86289910 12.94520375 8.19078176 10.99589001 10.95603240 11.81221141 10.85275405 5.44646468 11.52569541 10.80555591 -0.65154094 10.25719948 9.10164824 2.35202400 6.24325016 10.57484383 10.16581499 10.06824825 9.90971956 2.51835888 10.86855914 13.05767701 12.19636981 8.82618999 9.63729760 -0.00235530 0.45956000 0.45956000 0.00000000 -0.00527110 -0.00719580 -0.00069303 0.00013863 -0.00830050 -0.52788000 0.00013863 0.00013863 0.00444110 0.00444110 0.00569190 0.54983000 0.51037000 -0.00913150 -0.00588210 -0.00581400 -0.00121130 0.00694350 0.00889200 0.00889200 0.00889200 0.00458000 0.00458000 0.00458000 0.01684500 -0.49371000 -0.00235530 -0.01103300 0.00000000 0.01922300 -0.00719580 -0.00069303 -0.00069303 0.00013863 -0.52961000 -0.00830050 0.00152550 0.00152550 -0.52788000 0.00263570 0.00263570 0.00263570 0.00263570 0.00444110 0.00444110 -0.51029000 0.00569190 -0.51166000 -0.51166000 -0.00913150 0.00346870 0.00346870 -0.00581400 -0.00121130 0.00694350 -0.51125000 0.00889200 0.00889200 0.00527490 0.00458000 0.00458000 0.01684500 -0.00110870 0.02567100 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 9.0924244 12.3452581 5.4358952 10.2832282 4.2310714 10.3721860 1.5183337 0.9334216 8.3127727 8.0012764 NA 8.0756711 2.4358952 10.3420777 9.2241809 2.3484307 10.0336185 9.4777146 10.2064126 9.5832490 9.9255771 8.1541756 10.8778622 4.5382588 8.5517798 9.6315200 5.5578849 -1.6515409 10.5520855 4.5772475 12.5221088 11.7357758 8.7610013 10.6536384 8.8382796 8.8621591 3.5578879 2.6703645 NA 3.3484307 8.6601799 9.9035000 10.2299281 5.8562263 7.3691340 5.4569572 10.5706228 5.9333932 9.4621738 -1.6515409 11.6185809 2.7407549 5.2672961 9.6704442 6.6084574 4.5578879 8.9886765 8.6233921 9.7934464 NA 13.8114770 0.9334216 9.9230251 -1.6515409 7.7212968 6.1876351 7.6476397 9.4319110 13.449133 5.155786 8.597545 13.188127 10.441519 10.819090 13.593056 12.445558 9.709504 11.185074 13.269901 9.574242 9.276950 8.449094 1.518334 7.348432 11.199204 11.08059904 7.69272777 9.11164405 8.43589441 8.93433309 10.41116584 7.51333835 6.18132124 10.64190326 6.79964298 -0.65154094 3.51835888 6.37096633 10.53794733 9.95020243 8.24612587 7.45171968 12.82631633 5.87981357 11.12488518 11.45368537 10.60640864 9.87346303 11.57318699 9.73967515 10.71475381 8.74610614 -0.06657844 8.97989958 5.46737405 11.73980946 7.51835652 10.01398963 11.03733754 6.87590904 14.09145149 9.53887354 10.32785676 12.98720689 10.02350654 10.03973898 2.34843073 TCGA-D8-A1X9 66 0 NA 727 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 1 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 5.895554e-07 10.88549925 9.67016246 11.48600259 10.62188603 9.26598300 8.94982233 9.76925023 10.14647461 8.81209739 14.46959344 10.97251949 11.26108472 -0.39820842 13.59379672 3.57145839 8.59240882 4.61678113 8.58672534 7.76506261 13.34582494 1.71729805 13.73652577 NA 9.36038293 11.37812803 7.96377581 0.01692414 11.16129523 9.52119211 0.60179158 7.44313418 7.72939642 -1.98336106 5.20669401 10.27631857 10.53675154 9.10632005 11.07079543 9.91962150 11.98066878 -0.39820842 10.29270308 14.55931204 8.18153792 10.07316859 11.15386068 11.95562216 4.49260310 4.50872020 9.42466852 10.24568829 NA 11.48638420 9.96997470 7.00839164 4.55603083 10.39109405 12.08774522 10.90618343 12.05441652 13.82364573 7.15129566 10.67753405 10.39778243 10.84182833 11.65247435 5.38319278 11.87756862 13.30555545 -0.39820842 10.11094730 9.28189851 2.70617688 6.54434628 9.87718059 9.84341814 11.24388379 10.04304711 3.71730902 5.09368693 11.99584811 10.68531139 10.31865149 9.42626056 0.0069435 -0.0136770 -0.0063668 0.0080567 -0.0016629 0.0000000 0.5852400 0.5331900 -0.7482000 0.0234260 0.0234260 0.7055100 0.7012000 0.0044411 0.0090312 0.7732900 -0.7312600 -0.0153290 0.7109500 -0.7584900 0.7222500 0.1007400 -0.0299940 0.6581100 1.2777000 -0.0469890 -0.0398010 -0.0678600 0.7220600 -0.0189020 0.0069435 -0.0142280 0.0080567 -0.8372800 0.1340600 0.0045800 -0.7312600 0.5533700 -0.7482000 -0.0245240 0.6888200 0.0001527 -0.7582300 -0.6157500 -0.6157500 -0.0055375 -0.0166080 0.0044411 -0.0100940 0.0122370 -0.0134020 -0.7445600 -0.7703100 -0.7556400 0.0034687 -0.0224690 -0.7365400 -0.0306770 0.0019418 -0.7769400 -0.7763700 0.6581100 -0.7409200 -0.7788800 -0.0709100 -0.6089300 0.0157270 -0.7743100 0.701 0.701 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 -0.175 0.701 0.701 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 -0.175 8.55990130 13.41303951 7.62973837 9.24207702 2.38981458 10.83185255 1.18681746 -1.98336106 8.32293132 7.81776969 NA 8.31477174 1.71729805 10.69920588 9.23422155 3.37442746 8.16915436 9.47116896 10.16598151 10.07181294 8.87936760 8.92376008 10.55990139 2.54042410 8.40703870 9.25944834 0.01692414 NA 10.32606169 1.01685285 11.51185013 12.67139374 7.41347477 10.15354038 10.78505394 10.15097492 4.12539487 5.19678013 -1.98336106 2.77175884 8.15642089 8.59335377 10.16312005 1.82423833 9.24170936 6.07215297 9.73068563 6.40488610 10.35644130 NA 9.34778655 3.84975912 6.67508057 9.40682341 5.99540763 3.50872020 9.02879566 8.99128431 6.06671781 1.01685285 13.11473711 -1.98336106 10.52019848 NA 8.13321364 3.84975912 9.04339290 8.07350750 14.371066 5.682205 8.867056 13.593797 9.631579 9.947237 13.345825 12.269609 8.474250 11.168045 12.840088 9.164074 9.424669 8.442086 NA 8.206694 12.942795 11.1000165 6.8465924 9.1849148 8.5733757 9.7953574 10.0182355 6.5676169 6.6498655 10.9725195 6.2695344 0.6017916 6.5167149 7.1419467 12.5213783 10.3209357 7.8810558 8.9652368 13.2095862 5.4005755 11.5225311 9.1063200 10.5315836 9.6324993 11.5850632 10.1833466 11.1371074 9.1748481 NA 8.8105867 5.1358098 11.4863842 8.4070387 9.6774450 10.3910940 7.4721969 13.4409046 10.6391502 9.8157464 13.1409505 9.6817613 9.7570719 1.3387952 TCGA-D8-A1XA 64 0 NA 839 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 2 0 0 0 5.548757e-07 1.387189e-07 10.2214842 9.7075412 12.3688473 9.6015411 8.4830471 7.9463396 10.8702147 10.1675453 9.7096396 14.1146821 11.3523770 10.8907052 1.0203422 12.8151624 3.2833736 10.0124290 5.6409274 8.0971562 9.8134561 12.8896258 -0.3015148 13.8499839 4.1246755 9.0584802 11.4595480 6.5871549 0.6983963 10.9130350 10.6959447 -1.3015148 6.2530003 7.3094372 -1.3015148 3.0203422 10.0987581 10.8832877 9.4280331 9.5105897 9.6627533 12.1958900 2.2833884 11.1175825 14.5863945 9.6538952 9.8231800 12.5074771 11.7480908 4.8276971 5.4665978 9.9843924 11.1426508 NA 11.8160554 4.2833736 6.0647341 6.5249601 10.1480769 11.4307918 10.5482084 11.1537395 12.5359417 7.6379913 10.4478629 10.2576652 10.6892254 11.9957586 5.3277700 12.6893141 8.4549688 -1.3015148 10.6620310 9.1670365 3.2238550 5.5810559 8.1309540 9.8481595 11.2261337 10.2467526 4.3422703 7.9005360 14.1811258 10.8475243 10.1485926 9.2871271 0.10001000 0.10001000 0.10001000 0.10045000 0.10045000 0.11224000 0.83903000 -0.72305000 -0.69808000 0.09361700 0.09361700 0.09361700 0.05993400 0.06952200 0.08377300 0.08377300 0.08377300 0.07699500 0.07699500 -0.69823000 -0.70505000 0.00263270 0.00000000 0.00000000 0.00041298 -0.11273000 -0.11273000 -0.11273000 0.73056000 0.10001000 0.10001000 -0.68377000 0.10045000 -0.74260000 0.13080000 -0.70001000 -0.70001000 -0.73258000 -0.69808000 -0.74268000 -0.24095000 -0.26292000 0.09361700 -0.71738000 -0.71738000 -0.71738000 -0.78299000 0.06952200 0.06952200 0.08377300 0.08377300 0.08377300 0.08377300 0.07699500 0.07699500 0.07699500 -0.68387000 -0.70505000 0.00263270 0.01474600 -0.78379000 0.00000000 -0.65715000 -0.11273000 -0.11273000 -0.75000000 -0.26973000 -0.78833000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 -0.270 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 -0.270 8.0885816 12.9230924 3.9838145 8.9296336 4.0762341 10.3988521 2.3988429 NA 7.8017000 7.1619370 -1.3015148 6.0293292 4.9078665 9.5478175 9.8309121 3.0907349 8.0756230 8.6728270 9.9103006 9.9157642 9.2080092 8.3038917 9.0570636 2.2833884 10.3085145 9.3323157 2.2833884 NA 10.9663695 2.5057639 13.0708013 12.4434564 6.8069362 9.2786708 9.4549688 9.1120404 1.8683312 0.6983963 0.2833292 6.8121542 9.1340825 9.3512573 9.8950145 2.0203422 8.0200021 7.3167974 9.6670791 6.8980850 9.7089404 -0.3015148 12.2288187 2.6984185 4.0203422 9.5360797 7.8729635 3.8276971 8.9698754 7.7671906 5.4533003 0.6983963 13.6299809 NA 11.4814106 NA 6.5121937 3.9078617 7.6496974 9.0090252 13.912238 5.698413 9.178193 12.815162 9.487946 10.632840 12.889626 13.420152 9.310682 11.240932 12.451316 10.245307 9.984392 8.502543 1.698396 6.983814 12.735874 10.416945 8.755050 8.780561 9.820593 9.090730 9.795239 6.764501 9.832197 11.352377 6.675692 -1.301515 3.946338 9.204343 10.423353 9.665639 8.453300 9.308514 14.495187 5.141355 13.159330 9.428033 10.039375 10.196763 11.320693 9.972791 10.267319 9.785212 1.283388 8.922619 5.342270 11.816055 7.033803 10.391028 10.148077 8.107867 12.671390 10.572625 10.235631 13.198943 10.390156 9.652609 1.020342 TCGA-D8-A1XB 62 0 NA 552 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 10.779815 10.917148 11.921576 10.038465 8.374873 9.052199 10.488055 9.698390 10.354863 13.771914 10.799935 10.932080 2.456018 12.627395 4.652406 9.854753 6.605757 8.536383 9.738326 12.723089 2.040963 13.170469 6.040971 9.511518 11.276188 6.876672 NA 9.266581 9.561045 4.263365 8.297312 8.085366 1.871055 4.915440 10.015068 10.191283 10.326888 12.697397 10.210340 11.674371 8.965125 11.300977 15.106014 9.217993 10.218114 12.060408 11.587009 4.777935 6.543473 9.467236 11.756362 NA 11.234360 6.963804 5.836831 5.020796 10.265509 12.081718 10.836470 12.274858 12.921831 8.183930 11.134609 10.879591 11.294163 11.403890 5.514902 11.681819 11.825243 -1.129103 10.494928 9.400477 3.859731 5.000329 11.032494 10.531488 10.490808 10.217006 3.915444 9.749864 13.337251 12.099865 10.168536 9.684026 -0.0173910 0.6758600 0.6701100 -0.1173600 0.2134500 0.0274970 0.3307600 0.0000000 -0.4114600 0.3442100 0.3392200 0.3392200 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0146090 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2030900 0.1096400 0.1096400 0.1096400 -0.0058140 -0.0058140 0.0141900 0.1370200 -0.0253180 -0.0173910 -0.1734800 -0.1173600 0.0274970 0.0265140 0.3307600 0.3307600 -0.3466400 -0.4114600 -0.1547700 -0.1151500 -0.1065700 0.3442100 0.1348000 0.1348000 0.1348000 0.1841900 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0146090 0.0146090 0.0048579 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2061000 -0.3033400 0.1096400 0.1096400 0.0440070 -0.0058140 0.0141900 0.1370200 -0.4000800 -0.1617900 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 0.000 9.3119158 14.2229522 10.0926339 10.2433678 3.0409801 10.4024282 -1.1291027 0.4559650 8.1518177 8.9330928 0.4559650 8.7436910 2.9585086 9.7913996 9.5372708 3.8710452 8.4635039 9.4802255 11.0593265 9.3926471 9.6317500 8.1070612 10.7102506 0.1519887 9.7282503 9.9168064 2.9585086 NA 10.5189548 2.7779352 12.5822835 11.9852771 8.3406887 9.9847890 7.7290279 9.1401736 5.8934156 1.8710551 0.8710551 8.0509560 8.5149030 9.0447239 8.6928209 3.9585086 7.2983174 5.4256372 10.3867466 6.7227952 9.5671450 NA 10.8654002 2.5714827 3.9585086 9.3345506 4.1623551 3.6259367 9.6767907 7.6023656 5.6654638 0.4559650 13.4982957 0.4559650 10.3543587 NA 9.1010672 3.6783987 7.8425905 8.6209163 12.826544 5.425637 8.655682 12.627395 10.284675 10.777562 12.723089 12.355870 9.313503 11.182455 13.200983 10.313472 9.467236 10.729416 1.456018 7.398524 11.295476 11.662617 7.452247 9.124894 8.966444 9.199722 10.812879 6.665462 7.649124 10.799935 6.691226 5.691227 6.402429 7.223664 12.857778 10.263364 8.350827 8.607449 13.185984 5.060873 12.677358 10.326888 10.112434 9.914074 11.354107 10.175398 11.040659 9.624264 NA 9.572093 5.514902 11.234360 8.863985 10.684026 10.265509 8.274059 13.780424 9.861151 10.349311 13.030209 10.973022 10.277783 1.678387 TCGA-D8-A1XC 85 1 377 81 breast stage iiib t4b n1a m0 female 2010 NA no mucinous carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 10.670052 10.150260 11.901770 10.313799 7.967061 9.009830 11.374017 9.770398 9.614488 14.079282 11.929881 10.968975 2.632315 11.524310 4.824956 9.317809 5.984826 8.114973 9.893061 13.975178 4.217269 14.198907 5.552875 9.264006 10.501352 8.983564 NA 8.614472 12.730436 4.657846 8.696860 6.907103 -0.175110 3.682933 9.779878 10.780968 10.172022 10.430434 10.490735 12.000660 14.640713 12.183194 14.897213 6.857221 10.646330 12.032884 11.787670 2.409907 7.225834 8.806522 9.633919 NA 11.013543 2.824951 3.217277 3.217277 10.753103 11.577753 10.060370 10.619370 12.897338 6.664159 10.537052 11.195914 11.349741 11.593966 5.234344 11.874463 12.721192 -1.174947 9.854242 8.493839 2.732812 4.284388 10.548616 9.879559 10.331262 9.958739 3.284381 7.796498 9.996757 10.831982 10.199994 9.036843 -0.00636680 0.77118000 0.78736000 0.00188560 0.00541390 0.00332990 0.00041593 0.00069327 0.00069327 -0.00318590 -0.00318590 -0.00318590 -0.00484610 -0.00484610 -0.00318590 -0.00546520 -0.00546520 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00885260 -0.01532900 -0.01532900 -0.01532900 -0.01725400 -0.01725400 -0.01725400 -0.01174900 -0.00636680 -0.00636680 0.00162770 0.00188560 0.00332990 0.00332990 0.00041593 0.00041593 -0.87829000 0.00069327 0.00750000 0.00000000 0.00000000 -0.00318590 -0.00733390 -0.00733390 -0.00733390 -0.00733390 -0.00484610 -0.00484610 -0.00318590 -0.00318590 -0.00546520 0.00263570 -0.00346270 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00885260 -0.00456950 -0.01532900 -0.01532900 -0.00055444 -0.01725400 -0.01725400 -0.01174900 -0.00124730 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.7733212 11.1152614 0.4099068 9.7355973 2.2843957 9.6290855 NA NA 7.9150667 6.1103570 NA 5.5253955 NA 9.9004336 9.0645531 NA 4.3168047 9.4117942 12.6053918 9.2396398 10.3117644 7.9044395 10.2247665 4.0344094 10.6716202 9.6079528 1.9948693 NA 10.6042635 3.3485157 12.2595827 12.3627796 6.2428064 10.9819856 7.0585741 8.7718608 -1.1749471 0.8249715 1.1468507 6.4396647 8.8122184 10.0740680 9.2258340 -0.1751100 7.5195907 6.2172714 10.3577974 7.7791507 9.0669376 NA 13.4758380 0.4099068 10.5583936 9.2944436 6.4577322 NA 7.6419383 6.7014714 6.9071034 NA 13.2788682 -1.1749471 10.5383411 NA 8.7378439 4.9747037 7.3445906 8.8693486 13.6875032 3.3485157 8.8022346 11.5243101 10.3198101 10.4960532 13.9751778 13.6182530 8.9137427 11.1063050 12.8975896 11.1355673 8.8065219 6.3168083 0.8249715 7.1868987 11.5434874 10.7849565 8.7849564 8.9580968 8.4920659 8.3891038 10.3766868 5.9229875 9.0295258 11.9298808 7.0585741 NA 7.2761654 7.4512111 9.0344078 10.2284992 8.3543852 8.4831660 12.5517048 1.9948693 11.3895732 10.1720221 10.4127320 9.8389749 12.2139135 8.9606637 10.7003199 9.6852657 NA 9.0613396 0.4099068 11.0135434 5.1468833 10.9167270 10.7531027 7.4359794 13.3615660 10.2097382 10.2172719 13.2699694 9.7333471 10.1120897 NA TCGA-D8-A1XD 36 0 NA 522 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 5 1 NA NA 1 1 4 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6658479 10.2155618 12.3549212 10.3760823 7.8510956 7.2245536 11.8944957 9.8646930 9.7550687 14.1433474 11.3538369 11.0167639 4.0546314 13.2961730 3.8510994 8.7638033 6.7839817 8.7225808 7.9716085 12.9712941 2.1286233 13.6966330 5.2985557 9.3232681 11.7032230 3.8510994 -1.1933047 9.7337385 9.0112725 2.6140502 7.8095161 8.1173143 0.8066953 3.9359877 10.3698976 9.9822509 10.0938365 11.4061493 10.4314968 11.8409845 12.2102460 11.7895167 15.2185102 8.4602810 9.9690864 12.0106610 12.0689431 4.3916646 6.5481684 9.7839812 11.0549254 3.0546228 11.0842794 9.0270797 4.0921059 5.0546271 9.1587447 12.1325689 10.4369685 12.5050805 13.1265146 7.5209471 11.1373382 10.9001387 11.8354708 11.5717802 5.7492151 12.0781644 13.2835108 -1.1933047 10.2702257 9.1620524 3.9786258 3.0546228 10.7648916 9.8687476 10.4378784 10.1801103 3.9766294 9.7989317 12.5082244 10.6958250 10.8304557 9.6654594 -0.00069303 -0.00069303 -0.00069303 0.00180300 -0.00341970 0.00221930 0.00000000 0.00085121 0.61407000 3.34840000 3.65690000 0.67734000 0.00110930 0.00110930 0.00805670 -0.00346040 -0.00346040 0.11448000 0.11448000 -0.64274000 0.00708260 0.01042400 -0.00391880 -0.00391880 -0.00391880 -0.01340200 -0.01340200 3.65690000 2.16990000 0.01070300 -0.00069303 -0.00629240 -0.00341970 0.00221930 0.00221930 0.00000000 0.00000000 0.00736090 0.00055459 -0.00705760 0.00000000 -0.00620370 -0.65752000 -0.00885260 -1.29290000 -0.63273000 -0.62570000 0.00110930 0.00110930 0.00805670 -0.00346040 0.00750000 0.00750000 0.11448000 0.11448000 0.11448000 -0.64274000 0.00708260 0.01042400 -0.00471620 0.00652620 -0.00391880 0.01126100 -0.01340200 -0.59808000 -0.63045000 0.70495000 -0.62627000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.663 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.663 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 0.000 8.9940536 13.7512304 9.5088741 10.0492801 4.8669673 11.2126405 -0.1933047 NA 8.1817406 8.6584504 -0.1933047 8.5683856 2.5071350 10.1984820 9.7768072 3.1990127 6.7608982 9.0804970 9.3015570 9.3065473 9.4057773 10.6977255 10.6108324 2.1286233 9.8524610 9.4296683 7.3419769 NA 10.1070540 2.6140502 12.0518083 11.8926717 7.1241141 9.9653110 6.9411274 9.4451372 7.0161542 0.3916578 -1.1933047 6.6332496 8.7270542 8.9230455 9.5235208 3.9766294 7.6356949 6.5209471 10.4451373 7.0546293 9.6631268 -1.1933047 9.9126099 2.7135858 4.3302644 9.4788527 6.2799207 4.0546314 7.9940536 6.9256423 6.9204434 -0.1933047 13.2915872 1.1286233 10.6642937 NA 8.2537846 4.0921059 7.5380205 8.4666973 14.530705 4.976625 8.487940 13.296173 9.283447 10.065856 12.971294 12.027986 9.427837 11.398457 12.417034 10.537172 9.783981 8.979129 NA 7.551535 14.077252 10.757622 6.298554 8.987853 9.581488 9.167548 10.189012 5.199021 9.051065 11.353837 5.601117 4.894163 5.376558 8.343784 13.128629 10.502365 8.546482 9.578191 13.784652 5.520947 12.325087 10.093837 10.334667 10.088052 11.478685 9.898137 10.105909 9.864016 NA 9.481838 5.216094 11.084279 8.803881 10.127502 9.158745 7.946252 13.351485 10.398224 9.962784 12.274816 11.637811 9.484421 1.128623 TCGA-D8-A1XF 45 0 NA 463 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 10.66797770 9.56591661 11.78374090 10.69011665 8.56392001 8.48872708 10.15464346 10.59912137 9.83680055 14.49415486 11.86505081 11.31777093 -1.51704849 12.97639493 2.87542623 9.36498098 6.65302705 8.60722377 9.04247937 12.99750821 -0.51684205 14.05896655 1.48310634 8.73340078 12.05651285 6.96691837 0.48305474 9.70227088 5.05295924 2.57056008 9.29447716 6.73576721 1.48310634 5.27751989 8.64549380 9.35731535 9.45823373 10.22077226 9.68277465 11.84833120 2.48310634 10.94483759 14.17642596 10.37166678 9.45895037 11.15927982 11.95401538 4.92604687 6.53838451 9.17135271 9.60398827 -1.51704849 10.24506907 3.23799194 4.63284983 4.00666606 11.38000232 11.75762611 9.72270082 12.24049236 12.85759851 7.68031873 11.24382228 10.93247285 11.15574866 11.51307972 5.40589368 12.06512669 11.68736781 NA 9.27507924 10.60754679 2.39478850 3.52749577 10.29848569 10.87970714 11.18873471 11.24195015 0.06805164 9.63030736 9.68216120 10.00764403 9.90253596 8.61238531 -0.46345000 1.15890000 0.81642000 -0.00027724 -0.00027724 0.43142000 -0.48302000 -0.00041585 -0.47902000 3.65690000 1.90780000 1.92090000 1.19390000 -0.46664000 0.79529000 3.65690000 1.52690000 0.00000000 0.00000000 0.40644000 0.43598000 -0.44566000 -0.46334000 0.42671000 0.42671000 -0.01958900 -0.01958900 -0.01958900 0.39280000 -0.43940000 -0.46345000 -0.02809900 -0.00027724 -0.48428000 0.43142000 -0.48302000 -0.48302000 -0.00041585 -0.47902000 -0.47902000 0.41831000 0.41915000 -0.03883400 0.40411000 0.40411000 0.40411000 0.41451000 -0.46706000 -0.46706000 0.79529000 -0.45018000 -0.47913000 -0.47913000 0.00000000 0.00000000 0.00000000 0.40644000 -0.45982000 -0.44566000 0.41898000 -0.46334000 0.42671000 -0.00774820 -0.01958900 -0.01958900 0.39845000 0.86632000 -0.02109800 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 0.000 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 0.000 7.13056027 11.31500336 6.30328211 8.16434080 2.29045389 10.83348911 1.29048338 NA 9.05010767 6.62265367 NA 6.06806455 1.06805164 10.09781224 9.37336654 1.06805164 6.43729933 9.93688744 7.37184546 9.82183870 8.23065744 8.53838490 10.80840782 0.80504476 10.03384914 9.46680859 2.38997974 3.06806885 11.13751460 4.84065457 11.77930163 11.26528152 6.46609523 9.54041732 8.17833071 9.56125319 7.23129511 2.73103114 -1.51704849 0.06805164 8.74049014 8.36268554 9.59489000 3.73103114 8.70172613 7.16258267 10.42451684 6.59162706 10.04391287 -1.51704849 8.53974004 4.18354209 6.44310434 9.83688322 7.31085813 6.61752918 8.76038963 7.37792021 8.69984830 0.06805164 13.14443511 -1.51704849 11.43055667 NA 9.04820430 5.38999350 7.10148830 8.19734793 16.726519 5.805029 8.353467 12.976395 10.485896 10.449247 12.997508 12.444009 10.543798 11.062183 12.482398 11.782883 9.171353 7.251286 2.805024 7.428546 12.436571 11.673236 6.905167 7.793715 9.997323 10.628398 11.012347 4.290454 10.806439 11.865051 6.754566 -1.517048 4.892493 10.137237 11.292067 9.143990 8.351925 10.282384 11.155528 7.627761 10.902957 9.458234 9.290457 9.733993 11.666428 10.230037 10.835146 9.553894 -1.517048 8.904704 7.938429 10.245069 5.612385 11.286224 11.380002 7.834042 12.821003 9.500607 9.310445 12.261693 11.129436 10.188303 3.126956 TCGA-D8-A1XG 86 0 NA 448 breast stage iiib t4b n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 11.1053013 10.4113374 11.2405927 9.7498058 8.3369269 9.2359730 9.9904149 10.2689086 10.0500545 14.1612235 11.5047412 11.1482210 0.2144979 11.4573075 5.1053009 10.1793526 6.6956570 7.8703592 10.0516326 13.7663187 1.2145600 13.7597764 6.7223253 9.4942880 10.6702001 8.8845964 0.6295665 8.2461168 9.9270573 3.4875507 8.4369226 8.6309762 NA 3.3844505 10.1984740 10.7585288 10.0368356 10.4150203 10.3579136 11.8618389 13.8360862 12.5211617 15.4681809 8.0867843 9.5446705 12.1593644 12.0983191 4.6739634 8.2405924 9.3317406 10.8304665 -0.3703403 11.0992096 4.1841533 4.7170293 4.0218883 10.4272293 11.5919217 10.2387466 11.5445135 13.0509095 8.3574882 11.0234945 11.0451406 11.5554931 11.3581262 5.5720832 11.7732700 12.2396699 NA 10.2178140 8.9481108 3.0896507 4.6956598 10.3156306 10.7087193 10.5281693 10.0320470 4.4624581 9.4231712 10.8175384 10.8175384 9.9660744 9.0089462 0.82764000 1.83360000 1.93470000 0.01237600 0.01151100 -0.75866000 0.01642500 0.00722170 0.00722170 -0.01003500 -0.01003500 0.00464390 -0.00152430 -0.00152430 -0.00077822 -0.00077822 -0.00077822 0.00208050 0.00208050 0.01140000 -0.20223000 -0.01670400 -0.03476800 -0.03476800 -0.03476800 -0.04807200 -0.04807200 -0.04807200 -0.03176800 -0.79116000 -0.77380000 0.00000000 0.01237600 -0.79125000 -0.75866000 0.01774200 0.01774200 0.00722170 0.00722170 0.00722170 0.00708260 0.00708260 0.00263570 0.00479940 -0.00401620 -0.00401620 -0.00401620 -0.00152430 -0.00152430 -0.01670400 -0.00077822 -0.00077822 -0.00077822 0.00208050 -0.75564000 -0.01752900 0.01140000 -0.20223000 -0.01670400 -0.01271300 -0.03476800 -0.03476800 0.00471900 -0.04807200 -0.04807200 -0.03176800 -0.00995650 -0.02931100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.5514091 12.6835786 3.3844505 10.4260131 3.5364633 10.0468930 NA 1.7995018 8.3540818 7.4433489 -1.3703403 7.1492045 0.6295665 10.3103669 9.5160266 NA 6.5243850 9.5228695 10.8517590 8.7562724 9.6877896 8.3693483 11.4105177 2.6295665 10.0495280 10.0915588 4.8774940 0.6295665 10.9520594 3.0890065 12.6285989 11.5422701 6.8535691 11.0725114 9.0673198 8.8132034 6.1373621 1.7995018 -0.3703403 -1.3703403 8.0067782 9.4813169 9.1550887 3.5364633 8.8866492 6.6739620 10.3390825 7.7143760 9.2350473 0.9515132 13.1327725 2.8774891 7.7639944 9.4058282 6.3829854 -1.3703403 8.5137383 7.4142024 0.2144979 NA 13.5250485 -0.3703403 10.7446115 NA 8.5259001 4.6068449 8.0132724 9.0251019 14.296531 3.987121 7.076651 11.457308 10.477224 11.245427 13.766319 12.555771 9.539461 11.258469 13.420425 10.632383 9.331741 8.260745 2.436935 7.606848 11.912946 10.843280 8.284204 8.105301 8.644983 8.902198 9.965650 7.360887 9.569147 11.504741 6.391120 7.606848 9.004607 7.672677 13.237823 9.660235 8.125423 8.765277 12.434102 2.799502 11.544734 10.036836 10.423171 9.749806 12.097046 9.845707 11.089768 9.895769 NA 9.225842 1.799502 11.099210 6.877495 10.966172 10.427229 7.157045 12.815295 9.505317 10.227155 12.898475 9.967190 10.429254 1.951513 TCGA-D8-A1XJ 76 0 NA 663 breast stage iiia t3 n1a mx female 2010 NA no other specify 2 white not hispanic or latino NA NA 4 2 NA NA 2 2 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.768666e-06 6.242351e-07 8.9412977 9.8086600 11.1881055 9.4410848 8.2324147 8.7998897 9.8658039 10.2649971 10.6536853 13.4987121 11.8527891 10.5586818 0.2723816 17.7901071 3.9162664 10.0825827 4.4221590 8.1473942 7.0668287 12.9121491 1.4423331 12.3555596 5.0668297 9.4004071 11.2162096 3.7318458 -1.7273795 8.3398473 11.1470099 1.2724413 8.0372845 8.4976203 -1.7273795 4.1793040 10.8274812 10.4846051 9.6679469 9.4010517 10.4653220 10.8205121 4.5761956 9.6349045 15.6056817 7.8012964 10.2978985 9.6754248 11.2641117 3.6299627 3.4818672 9.0660160 11.4560481 1.2724413 11.2787388 5.3058356 5.1303955 4.9306238 9.0011835 11.8807831 10.1569649 11.3725823 12.8227387 7.7420547 10.5534734 10.2907138 11.0383204 10.9626291 4.6299627 12.7498548 10.6247321 -1.7273795 10.0277176 9.0973714 2.8239327 4.4423398 11.4023397 10.2674732 9.5333323 9.8917157 4.8871207 10.5499908 13.0501818 11.0399766 10.1307824 9.1210356 0.150990 1.895200 0.154570 -0.241560 0.443760 -0.629410 -0.212060 0.482710 0.482710 -0.461420 0.076135 0.662860 0.063223 -0.249580 -0.245940 0.142360 0.142360 0.140580 -0.640380 0.118880 0.099579 -0.253220 -0.583630 3.656900 -0.633010 0.133320 0.133320 0.133320 1.298500 -0.656960 0.150990 -0.232760 -0.241560 -0.304280 0.000000 -0.601190 -0.029584 0.495970 0.482710 0.543650 -0.062495 -0.670580 -0.946710 -0.052936 -0.056307 -0.056307 -0.024935 -0.249580 -0.249580 -0.243750 0.142360 0.142360 0.142360 0.140580 -0.637180 -0.637180 0.145930 0.099579 1.787400 0.167750 -0.640290 -0.633010 -0.527670 -0.236920 0.133320 -1.054100 -0.139490 0.149050 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.640 -0.640 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 0.337 -0.106 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.640 -0.640 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 0.337 -0.106 7.6255598 13.2760185 7.0339636 9.6403735 2.8573839 10.8351322 0.8573441 -0.1425763 8.4373197 7.8096312 2.9728580 7.5250783 3.1303873 10.8720932 9.2244260 0.5943575 5.6387342 10.2857355 10.9151414 9.8375149 8.9795215 7.4696296 10.8001341 1.7318349 9.4074806 9.4183449 0.2723816 NA 10.5135021 2.1792881 13.1498886 11.8442839 6.9693808 10.6870980 8.8498417 9.7405276 4.8871207 2.3598866 -0.7276184 3.3168119 8.4221598 9.4915814 10.9847248 0.8573441 7.7245507 7.4647058 9.8658039 6.4373193 8.6902652 NA 9.9404112 2.8573839 1.7318349 9.8518230 5.7859820 2.4423331 9.0668287 7.8667374 4.9866567 -0.7276184 13.6527724 1.5943575 11.7568581 NA 8.3518977 4.5943395 8.3783213 10.2367537 12.3004172 8.2511231 7.5670335 17.7901071 10.4592977 11.1068838 12.9121491 11.9234645 9.0981824 11.0180535 13.5224521 9.8284398 9.0660160 7.2975528 0.8573441 6.3861557 11.9628473 11.328034 4.698680 9.130394 8.060315 9.288525 10.575320 5.249692 5.432285 11.852789 8.703910 5.105301 8.951013 8.373141 11.091394 10.005004 8.442338 8.180805 10.373075 3.316812 10.554340 9.667947 9.992229 10.269592 11.298936 9.836562 10.726455 9.519153 7.534508 9.991930 3.226616 11.278739 8.040597 9.849568 9.001184 8.122756 14.015865 9.703388 10.585863 12.212543 10.711205 8.924362 1.972840 TCGA-D8-A1XK 55 0 NA 441 breast stage iib t2 n1a mx female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.129335e-05 7.074665e-06 9.7270091 9.3474340 11.1935253 8.9505238 9.0373344 9.1206246 7.9377987 10.6317101 9.8551955 11.4215699 10.1220315 10.9176883 0.4411647 11.2680108 1.9265688 9.7725096 7.3576215 8.1262440 9.2484995 5.1636114 NA 8.4985947 8.0155489 9.3458454 10.5091167 4.3090379 -0.2958363 8.9568367 12.0908499 3.2891410 7.9473529 9.3689226 1.1192234 4.2484969 10.1738209 11.1032789 9.5611233 8.5179603 9.7778743 10.6615229 0.1191569 8.3895117 13.7603369 9.5031583 9.9217330 11.0831963 10.0763186 4.9895796 -1.8809759 9.6938101 12.5593720 1.2891262 9.9658822 6.0907603 7.2941419 5.9709664 8.9193076 12.4848555 10.6180657 11.0412434 12.9508207 6.9988003 11.0005218 11.0208434 11.6861030 10.9989912 5.3576224 12.5495384 6.5072333 NA 10.8640504 10.1680439 3.8290580 4.4767705 11.6303515 9.9341995 11.7648749 9.4866313 -0.8807102 6.7738526 12.7913656 12.0352826 10.4679447 9.1192166 0.2950100 0.2808800 0.5671800 0.3637700 0.7871700 0.3194800 0.3207600 0.3704600 0.3573200 0.3098500 0.3098500 0.3100600 0.9025100 0.0965250 0.1786000 0.2183700 0.1731700 0.3354500 -0.3635200 -0.3645400 -0.3640800 1.2208000 -0.3819000 -0.3666700 -0.3610200 0.0889310 0.0889310 0.2864400 0.3474600 -0.3436600 0.2950100 -0.0073339 -0.3585200 -0.3768500 -0.3612500 -0.3828100 -0.3545500 0.0197830 0.3573200 0.0442900 -0.4063900 -0.3956400 0.2899200 1.0840000 1.1029000 -0.1811800 0.0016642 -0.3700800 -0.6465900 -0.3593100 0.2183700 -0.3601100 0.1581600 -0.3675900 -0.3635200 -0.3635200 -0.3480200 -0.3715500 -0.7475100 -0.1738600 -0.3819000 -0.3514500 0.0784380 0.0889310 -0.3740300 -1.1753000 0.2895600 -0.3727900 0.000 0.000 0.158 0.158 -0.364 -0.364 -0.348 -0.364 0.000 0.000 -0.169 -0.361 -0.361 0.000 0.000 0.000 0.000 0.281 0.000 -0.367 -0.367 0.339 -0.373 0.000 0.000 -0.123 0.235 -0.360 -0.360 -0.364 -0.364 0.286 0.286 -0.340 -0.340 0.310 0.310 0.132 0.000 0.000 0.000 0.000 0.000 0.158 0.158 -0.364 -0.364 -0.348 -0.364 0.000 0.000 -0.169 -0.361 -0.361 0.000 0.000 0.000 0.000 0.281 0.000 -0.367 -0.367 0.339 -0.373 0.000 0.000 -0.123 0.235 -0.360 -0.360 -0.364 -0.364 0.286 0.286 -0.340 -0.340 0.310 0.310 0.132 0.000 0.000 0.000 7.6852709 12.4053411 4.2066823 9.3766045 0.3671474 12.4476811 0.4411647 -1.8809759 10.3389901 8.2066794 1.8196682 6.6349170 3.4767705 11.3701071 9.6651463 5.7116739 6.5029209 10.6890721 9.7562941 9.6210537 9.1551496 7.5949501 11.2287208 2.5115439 7.5093855 9.2790880 0.1191569 NA 9.4103873 3.0261095 12.5753784 12.4610828 7.8022113 10.3353561 11.0056752 10.1836225 5.1415840 2.6427709 NA 5.7265479 7.9441750 9.6408170 7.0964970 3.9521099 7.8445658 6.7449253 9.9341995 4.5115313 11.1225588 4.0018563 11.5208960 2.9265688 4.1853036 10.0110724 6.3876417 6.3953405 7.8196561 8.2689635 8.0602641 6.0675828 13.4940523 -0.2958363 10.7472063 NA 11.2114782 4.0499531 8.7747472 6.3766047 11.274147 9.456838 7.974085 11.268011 8.974085 11.190176 5.163611 8.083558 9.795976 11.279876 13.758416 11.222668 9.693810 8.240750 1.119223 7.936200 10.668520 10.701123 4.939396 9.472915 8.976420 8.277826 9.689447 6.141584 4.268966 10.122032 11.889261 8.583762 10.124139 9.714884 11.663819 9.908750 4.185304 9.069043 9.748573 6.923348 10.193017 9.561123 9.740811 10.099356 12.090311 10.705118 10.622297 8.988810 NA 8.728201 8.261323 9.965882 7.961567 11.884065 8.919308 7.809354 14.473328 10.326231 10.499678 13.085001 11.234748 9.616569 1.926569 TCGA-D8-A1XL 34 0 NA 606 breast stage iib t2 n1a mx female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 6 NA NA 1 4 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.53162e-06 2.774378e-07 9.062688 8.062688 11.054305 6.693176 9.953327 9.339449 9.591401 9.638146 10.629708 13.285230 10.924181 10.423213 1.309467 13.912170 1.894449 9.572740 7.281015 8.743056 10.798566 12.220582 -1.690591 13.897542 6.509143 9.431348 10.706611 8.121649 1.116830 12.986424 10.456358 -1.690591 7.489380 5.953328 NA 4.833032 9.234284 9.890201 8.959625 9.924641 8.571566 10.350446 2.701793 10.850084 13.647476 4.547110 9.764284 10.202393 9.933810 4.499297 3.167454 8.873621 9.856848 NA 10.848872 5.154960 6.077655 5.037391 8.601793 11.883000 9.735736 10.762742 12.593862 6.640388 10.509450 10.023382 10.066861 10.112795 2.894430 11.976583 11.916223 3.009902 10.301347 9.503612 1.294959 4.848628 11.127254 9.751896 10.768647 8.906593 6.129650 5.192115 11.903446 12.246477 10.366447 9.106322 -0.0168410 0.7457500 0.5707700 -0.4364800 1.1737000 -0.0419240 0.3662500 0.3971200 -0.4211200 -0.4673800 -0.4673800 1.4507000 -0.0187650 1.1508000 0.6131700 -0.0164290 -0.0164290 -0.0045695 0.5940400 -0.4507200 0.4371100 -0.4370800 -0.4417800 0.4099400 -0.0019399 0.0168570 0.0168570 0.0269350 0.3848400 -0.2750000 -0.0168410 -0.0380340 -0.4364800 -0.0419240 -0.8500300 -0.4262600 -0.4262600 0.3971200 -0.4211200 -0.4211200 -0.0139530 0.4124500 -0.8827100 0.3395000 0.3395000 -0.0018014 0.3341500 0.3807200 0.8619500 0.2942100 -0.0164290 -0.0164290 0.3167500 -0.0045695 -0.0180780 -0.0180780 -0.7806600 -0.1785300 -0.4552200 -0.2828700 -0.4417800 0.3464800 -0.6465000 -0.4495400 0.0269350 0.3909800 -0.4202500 -0.5045400 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.437 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.311 0.311 0.000 0.000 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.437 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.311 0.311 0.000 0.000 8.8033265 12.5376886 8.1119875 9.1666745 3.7017930 11.1248544 3.5948710 NA 9.5591773 8.4310049 1.8944492 6.5809339 0.3095255 10.7895040 9.4451804 4.8944346 6.3483900 9.5954513 8.2967350 11.6422071 8.9643400 6.3262803 10.0488299 2.4793858 6.7647986 9.4477430 7.9056608 NA 10.5161803 3.3094673 13.5167525 12.4378683 7.2607559 9.7044696 11.3434103 10.0382421 2.8944298 1.1168305 NA 7.1232523 9.2709209 9.6703183 10.9756952 1.4793858 7.9017412 8.2387295 10.0941061 5.5948740 10.3518146 NA 9.8906718 -0.6905910 2.9533211 10.0612746 5.7201334 6.3701678 9.1264549 8.6392676 8.9415577 -1.6905910 14.2107859 NA 11.1348275 NA 6.3206977 2.9533211 8.2490504 8.5079163 10.993126 6.949716 8.557399 13.912170 9.777077 11.056825 12.220582 9.094106 8.542276 10.157312 13.353524 12.776121 8.873621 9.110371 3.864057 8.427114 9.431652 11.072891 6.370168 9.083435 9.565680 9.042486 10.203084 7.797311 5.631398 10.924181 8.295313 NA 7.213353 8.471170 9.334611 10.171333 8.099005 9.876001 5.981896 7.516486 11.696626 8.959625 11.159267 10.373203 9.558585 8.989831 10.536485 7.016831 3.594871 9.459498 8.006439 10.848872 4.768904 11.142361 8.601793 7.044181 14.127479 10.638146 10.523487 12.225631 10.795552 9.527429 3.116830 TCGA-D8-A1XM 57 0 NA 538 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 3 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1.213791e-06 4.508365e-07 10.90993103 10.52541549 12.24641803 10.31514718 8.48749238 9.27364316 10.44172291 10.15218583 9.37510353 13.61544218 10.59200164 11.14883855 1.88440255 13.59848812 3.66200036 9.58582617 5.11046347 8.60451802 9.61522997 13.00999392 3.63162817 13.62122066 4.41689377 9.02963674 10.82774798 8.76091285 0.07710624 11.92488041 10.08441883 3.07703786 7.15919018 8.03704281 -1.92303052 3.85839882 10.14816818 9.83900769 9.77748070 11.86443349 8.51583306 11.20873726 1.53645083 10.37453049 14.59272547 8.35197808 9.26622926 11.33545986 12.29930766 4.32496897 3.16449668 9.51323194 11.21755130 NA 11.54069314 7.18556529 7.06572524 5.48643121 10.92174679 11.81079786 10.77139893 12.31208293 13.05485758 8.38196250 11.41563816 10.72840448 11.52515735 11.38623316 5.62393415 12.33059310 11.31887526 -0.33806802 10.43184137 9.33265983 3.03449746 6.81513348 10.17441478 10.34762834 10.46532743 10.05253083 5.26686523 9.22169925 12.75762033 11.85151927 10.27179787 8.91781899 -0.48397000 0.45939000 0.45939000 0.00305220 0.00305220 0.00666530 -0.01578300 0.00444110 -0.49746000 0.00194180 0.00194180 0.00194180 -0.00097017 -0.00097017 -0.00415460 -0.00497200 -0.00497200 -0.49726000 -0.00027724 0.00680440 -0.00166290 -0.00733390 0.44494000 0.44494000 0.44494000 -0.01367700 -0.01367700 -0.01367700 -0.00650500 -0.00774820 -0.48397000 -0.00636680 0.00305220 0.46263000 0.00666530 0.00000000 0.00000000 0.00444110 -0.49746000 -0.01188700 0.00513590 -0.50108000 -0.51300000 0.00763920 -0.00924360 -0.00924360 -0.00924360 -0.00097017 -0.00312270 -0.00415460 -0.00497200 -0.00497200 -0.00497200 -0.49726000 -0.00027724 -0.00027724 0.00680440 -0.00166290 -0.00733390 -0.01560400 -0.50888000 0.44494000 0.00555290 -0.01367700 -0.01367700 -0.00650500 0.00610900 -0.51197000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 0.000 9.7013796 13.7188670 10.8298398 10.1727678 3.8049622 10.6627078 2.8319380 1.5364508 7.6917512 8.7208971 -0.3380680 7.9890169 4.9099315 10.5217971 8.9154570 3.3624418 9.4564193 9.5537873 9.8273294 10.5726462 10.3741838 8.0770411 10.9299606 4.2469629 8.5210205 9.5090608 4.2063228 NA 10.9170321 2.8844026 12.4041024 12.2844367 8.6306705 9.7582795 10.1468264 9.2594354 5.7635417 0.8844026 -0.9230305 3.6917463 8.7635417 8.8722689 8.9334667 6.2267879 8.3754244 5.6843727 9.7972852 6.3716617 9.9992538 -1.9230305 10.4612851 3.3989660 4.4520814 9.5291072 6.2739634 5.6392843 9.0593217 9.1664915 6.9535574 -0.9230305 13.4284634 0.3990070 10.7516747 NA 8.9876838 3.8843928 8.1049473 8.8852010 13.5238210 6.2063248 8.4980538 13.5984881 10.2626598 10.8187187 13.0099939 12.1281650 9.1998691 10.7611322 13.3484311 10.1004489 9.5132319 10.5142729 -0.9230305 7.7370371 12.3479203 11.346314 6.858401 8.564881 8.809208 9.457502 10.584826 7.706398 7.988433 10.592002 6.438985 5.110463 6.900408 7.341109 12.924637 10.797072 8.307061 8.954325 12.644522 7.110465 11.288945 9.777481 10.221062 9.721799 11.855221 10.068208 10.605983 9.853063 NA 9.758284 6.756522 11.540693 7.864944 9.951638 10.921747 7.864944 13.095546 10.242890 10.292271 13.664086 10.676024 10.116303 2.246955 TCGA-D8-A1XO 56 0 NA 1682 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 10.7782299 10.3542323 11.1777820 10.4741700 8.3885439 9.7789169 10.0709603 9.9570091 9.3489990 12.1726507 11.3643371 10.5066040 1.7422650 12.6876682 3.8577621 8.8689898 6.5877760 7.8119590 10.8038815 12.6667886 1.6167341 13.8234636 5.6887035 9.5684948 10.3557679 6.1460075 -1.8426975 10.3042701 8.0059456 2.0642276 8.6126500 7.6828436 -0.8426975 4.4241092 10.3804195 10.3489990 10.5402170 12.9256105 10.9188740 12.0298053 7.6451627 11.8925615 14.3918222 9.2847045 10.1467173 12.0418750 11.9366318 4.8438231 6.0153035 9.7497798 12.7543278 -0.2577350 11.0754406 5.7422865 6.9775020 4.2866077 10.7233768 11.7878175 10.8321771 12.0288431 13.0810681 8.3897436 11.2574923 10.8895878 11.4456121 11.4220586 5.6411385 12.0000660 10.5269202 4.2658494 10.1331707 9.4076213 2.4097982 6.2234129 10.8444797 10.8394395 10.1904016 10.1027666 2.2447957 9.8525510 13.1764791 12.8630632 10.4409900 9.5230985 0.00485790 0.58274000 0.59120000 0.01265500 -0.00298010 -0.59448000 0.01740400 0.00763920 -0.61556000 0.00138680 0.00138680 0.00138680 0.02062300 0.02062300 -0.00539920 0.00694350 0.00694350 0.01098200 0.00451790 -0.00664320 -0.59973000 -0.60632000 -0.02548300 -0.02548300 -0.02548300 0.01014600 0.01014600 0.01014600 0.03383100 -0.60197000 0.00485790 -0.00498440 0.01265500 -0.63812000 -0.59448000 -0.00032885 -0.00032885 0.00763920 -0.61556000 -0.63339000 0.01307400 0.01307400 0.00138680 -0.00715980 -0.00715980 -0.00715980 0.00000000 0.02062300 0.02062300 -0.00539920 -0.00539920 -0.61767000 0.01992300 0.01098200 0.00451790 -0.60950000 -0.00664320 -0.59973000 -0.59944000 -0.58853000 -0.02548300 -0.02548300 0.01572700 0.01014600 0.01014600 0.01419000 0.01628600 -0.59468000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 9.6177787 13.4474857 4.2866077 10.0376716 3.3013682 10.2254293 1.4792306 -1.8426975 8.1488446 7.9038373 NA 8.3347426 0.7422650 10.2978330 9.2281147 -0.2577350 8.2247571 9.5485665 10.0203475 9.0828771 8.6817764 8.2749661 10.2314643 4.7271799 10.2888582 9.4473416 0.4792306 NA 10.3963246 2.6808869 13.4223518 11.5668464 8.0791637 9.9798936 8.4461888 9.0129700 6.5751747 1.1573025 -1.8426975 -0.8426975 8.4702058 9.1158755 10.2417991 2.7422865 6.6808841 5.1346029 10.3804195 5.6491757 9.3764914 -0.8426975 11.1297642 5.3171955 3.8011794 10.1336828 5.6359720 4.3272490 9.6446604 7.9759047 5.9517393 NA 14.0489879 -0.8426975 9.8843923 -1.8426975 9.6028551 5.2553534 7.9038373 8.7553753 13.0041941 4.9646759 7.9021568 12.6876682 10.5867976 10.7759377 12.6667886 12.0141374 9.6504978 11.5871218 13.0712874 8.9662871 9.7497798 9.4848754 0.1573025 7.8119590 11.6112364 11.143165 7.861227 9.314038 8.419418 8.905516 10.622440 7.598192 7.148845 11.364337 6.790319 5.002815 7.655174 6.452770 10.648675 10.393038 7.999673 7.917211 13.919471 6.212604 10.827789 10.540217 9.962664 9.608019 10.600266 9.730970 10.761644 9.058190 NA 8.863033 5.414711 11.075441 8.604406 9.971505 10.723377 7.207335 14.419821 9.352695 10.720757 13.042733 10.966287 9.934578 2.064228 TCGA-D8-A1XQ 69 0 NA 499 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.529376e-05 5.305999e-06 9.9320483 8.6329756 10.5699914 8.9551117 9.0041879 8.5746019 8.9863865 9.9765833 12.4382488 13.1370507 9.6875776 10.7253861 1.0025945 11.7309850 2.0025945 9.3961222 6.4944316 9.3595021 12.5682927 8.3576149 -1.8049044 6.2505069 9.1266998 9.3600427 11.5924972 6.0281138 2.3651606 10.2991670 10.5334028 0.1952216 9.2511839 7.1435904 NA 6.6910791 9.9650615 10.6890791 9.8760227 9.1760771 9.9605097 11.1399357 5.5702625 4.7498131 16.1673901 6.7267999 8.8991273 10.5103732 10.1750061 2.7187890 NA 10.4222378 10.0102065 0.1952216 9.8485165 5.6464334 7.0122077 5.9025825 10.7712355 11.8880570 9.6800465 11.4650808 12.8870762 7.4360152 10.9526136 10.6635626 11.1530512 10.4119695 3.1021206 12.4967913 9.7109235 7.4573185 11.2634981 8.6360928 3.0566876 5.8817233 9.6790395 10.4780225 10.1874539 10.4872576 3.0531982 6.1200367 13.2691978 12.6505508 9.0694366 10.0686677 1.562800 2.936500 0.081322 0.232560 1.267800 0.029888 0.056940 0.763890 0.228230 -0.300750 -0.300750 1.432600 0.046842 -0.193120 -0.527360 0.434460 0.092460 -0.473000 -0.273200 0.525900 -0.261550 -0.525420 -0.173220 -0.173220 1.004900 -0.105000 -0.105000 0.294210 0.175130 -0.493500 -0.262880 -0.236920 0.153670 0.029888 -0.521020 -0.862470 -0.556870 1.512300 0.228230 -0.851700 -0.523280 -0.169420 -0.290000 0.589010 -0.506600 0.075559 -0.147850 -0.531540 0.314180 -0.245690 0.434460 0.539770 0.046842 -0.473000 0.000000 -0.126940 0.392470 0.418310 -0.831060 -0.138200 -0.173220 -0.173220 -0.049019 -0.439620 -0.105000 -0.196370 -0.065447 0.089272 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.220 -0.116 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.228 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 0.155 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.220 -0.116 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.228 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 0.155 8.5582634 13.4635463 NA 9.0824442 3.8667992 11.8537699 0.7802261 4.4620130 8.9888270 8.5372984 1.0025945 7.9048592 4.4431491 10.7740680 9.2565948 4.7030176 6.1021143 9.6282873 8.9383749 9.9658876 9.3133731 6.5306139 12.4631076 1.3651326 8.2919387 9.9047383 4.1259569 -1.8049044 10.5670002 2.4431557 13.2592085 12.2289908 7.6526048 10.3566705 8.7275795 9.7114161 2.7801841 2.8956710 -1.8049044 3.9231397 8.2958860 10.0229632 8.7507713 -0.2197739 9.1644373 6.5216538 10.5334028 7.0122077 11.2111613 5.3245082 11.2137716 7.0090045 3.0025765 9.6119790 5.2592650 8.7079640 8.9839418 9.6551675 10.0328516 2.5171497 13.2170278 0.7802261 10.8138386 NA 6.8390803 3.6870719 9.2457526 7.9847574 12.892822 6.355096 9.002578 11.730985 10.133701 10.374822 8.357615 9.775482 9.384430 9.833660 14.749483 11.050092 10.422238 7.306359 2.443156 9.910757 11.168562 10.400100 4.839078 8.823669 9.531730 7.878218 10.316071 6.849859 4.976584 9.687578 7.183908 3.002577 5.433627 8.456708 12.670134 10.142495 8.341156 8.036002 7.228647 8.830035 11.718515 9.876023 10.487258 10.331253 10.106616 10.505552 9.789548 9.287981 NA 10.044805 9.354464 9.848517 6.613076 10.302823 10.771235 7.280032 13.509524 10.012607 11.430789 11.790831 10.663593 9.066359 4.499004 TCGA-D8-A1XR 56 0 NA 482 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 3 NA NA 1 1 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.218048 10.314673 11.675827 9.639431 8.845580 8.810662 10.666092 9.881587 9.648897 12.388444 11.703020 10.540218 3.000090 12.391468 3.585059 10.054695 6.119030 7.647548 11.835845 13.572998 2.807437 13.846927 6.243263 10.091826 10.688996 6.175016 -2.000000 8.448206 11.914382 2.585059 5.994444 7.651142 NA 3.672516 10.111226 11.630244 10.614340 11.786360 10.354615 11.832684 5.820268 10.601861 14.496866 9.383373 9.257478 11.735223 11.629105 2.807437 2.322015 8.821067 11.207562 NA 11.165782 3.614804 4.754978 5.219258 10.364498 12.124858 10.784725 12.419853 12.957192 6.603717 10.279411 10.497977 11.157121 10.847735 5.539249 12.924114 11.062811 NA 9.987710 9.370233 3.646543 2.858080 11.156489 10.692924 10.684181 9.847539 1.807437 7.784725 12.225750 11.226201 9.893392 9.158069 0.71810000 1.23180000 1.23240000 0.07656600 0.06494000 -0.73847000 0.04542400 0.03383100 0.03383100 0.04216600 0.04216600 0.04216600 -0.06072800 -0.05590300 0.01642500 0.01642500 0.01642500 0.01153900 0.01153900 0.05793900 0.02118300 0.01754400 -0.04522800 -0.04522800 -0.04522800 -0.07974200 -0.07974200 -0.07974200 0.09449100 -0.34756000 -0.31800000 -0.31120000 0.07656600 -0.73847000 -0.74224000 0.04267900 0.04267900 0.03383100 0.03383100 0.03383100 1.33920000 0.00000000 0.04216600 0.02539000 0.02539000 0.02539000 -0.00960090 -0.05590300 -0.05590300 0.01321300 0.01642500 0.01642500 0.01642500 0.01153900 0.01153900 0.01153900 -0.73099000 -0.01817800 -0.00092134 -0.75773000 -0.04522800 -0.04522800 0.65351000 -0.07974200 -0.07974200 0.09449100 -0.12330000 -0.16777000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.742 -0.529 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.742 -0.529 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8873108 12.8355978 2.2480186 9.0203758 2.6826632 9.8412613 -1.0000000 NA 8.3454953 7.8138716 NA 6.9773704 1.7005285 9.8888335 9.6448477 3.5236498 7.3642248 9.7863598 12.2632126 10.8353511 9.1742731 8.4073579 10.8210669 2.2480186 9.5765745 9.5019273 1.9069675 NA 10.2665839 2.8580805 13.0425191 11.6551736 7.2645327 10.6328582 7.3620341 8.9278680 3.1293655 0.5850587 -1.0000000 4.9308272 8.6184758 9.1092678 10.7434519 4.1700132 7.7857879 7.4979420 10.4618253 5.8329811 9.5300087 NA 13.0717620 2.1700212 6.8735339 9.8734420 6.3632166 -0.4150375 8.0928475 8.8941499 3.9308319 -0.4150375 13.8508630 -1.0000000 9.9455340 NA 8.1190314 3.9308319 8.1973066 9.1377218 14.150995 4.965877 8.204661 12.391468 10.705943 11.562929 13.572998 13.405365 9.566144 11.176107 13.564329 8.774877 8.821067 9.396695 2.322015 8.335481 11.473669 10.621684 6.262185 8.673399 8.902465 9.512337 10.188651 5.807445 8.620310 11.703020 4.087556 -2.000000 6.686590 6.576462 10.344664 10.028687 8.683769 8.621226 12.864808 2.906987 11.946372 10.614340 10.274177 9.933781 11.811565 10.260716 10.849495 9.372411 NA 9.351675 2.248019 11.165782 6.546984 10.411972 10.364498 7.312973 13.414742 10.101738 10.464636 13.168684 9.997623 9.937832 1.169989 TCGA-D8-A1XS 48 0 NA 496 breast stage iiic t2 n3a m0 male 2010 NA yes other specify 25 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.774378e-07 11.1960225 10.3488522 11.4962567 9.7400914 9.3475583 9.0407607 9.2040879 9.8809082 9.3404210 13.2571216 11.5693958 10.5176990 3.2253829 13.6300533 4.2253752 9.1918829 5.1561134 8.9413393 10.6615684 13.2121971 1.2253983 13.1655533 1.5473018 8.7242266 11.7559056 3.8103403 -0.7747251 8.9575449 10.5362741 3.3546637 7.5130896 7.2860735 NA 4.1322643 9.3630090 11.1773906 9.6605267 11.7911935 10.3191251 11.6326452 0.2253983 11.3916974 14.6423233 7.9996376 8.5119353 11.1909813 12.5935428 3.0833666 1.2253983 9.5102014 11.0325310 -0.1896803 11.1286944 5.4445445 6.5741061 5.1678918 10.8771018 12.0270857 10.0692984 13.0221775 12.8245929 7.6133946 11.3425334 10.9731969 11.2317035 10.8535950 4.9935612 12.6606570 11.6764597 -1.7744783 10.1397625 9.5107796 3.0429945 5.8547338 10.0724348 10.2948271 10.4351354 11.4701872 4.0833581 7.9685286 12.2350311 11.7065461 9.6521663 8.9609333 -0.2993300 0.9863800 0.9915500 0.0535210 0.0535210 0.0332670 0.1013300 -0.0150730 0.0000000 -0.5041100 0.0019418 2.0957000 -0.0151910 -0.0151910 -0.1633200 2.6796000 0.3177100 0.0239870 0.0239870 -0.0596730 0.0482620 -0.1148200 0.9836900 0.9836900 0.9836900 -0.0053992 -0.0053992 -0.0135000 2.1936000 -0.2993300 -0.2993300 -0.0519910 0.0535210 0.0332670 -0.7097100 0.1013300 0.1013300 -0.0150730 0.0000000 0.0000000 -0.0156040 -0.0156040 -0.5150600 -0.1162600 -0.1162600 -0.1162600 -0.1162600 -0.0151910 -0.0151910 -0.1633200 -0.1633200 -0.6653100 -0.6653100 0.0239870 0.0239870 0.0239870 -0.0596730 0.0482620 -0.1148200 -0.6328200 -0.7111400 0.9836900 0.0536640 -0.0053992 -0.0135000 0.7539500 0.0376410 -0.0431920 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 0.000 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 0.000 8.6209115 13.3120941 7.2914663 9.5205723 4.3628836 9.4145842 -1.7744783 NA 8.3378168 7.6889021 NA 7.6497326 1.5473018 10.3855639 9.3934226 2.9802630 7.2477453 10.0665486 8.8960335 11.4829126 9.2339460 7.9968666 10.7287062 2.7489335 9.8327078 9.2738644 5.5382588 -0.7747251 11.0704753 2.4732934 11.9201705 11.7258459 8.0708675 10.5509639 8.0880149 9.3946760 4.9935612 1.5473018 0.2253983 7.4827652 8.4827652 8.4827652 10.2428817 3.2253829 5.9938260 5.9802653 11.6380795 6.3494980 10.5388273 NA 9.7577333 1.0327356 3.8978019 9.8126346 5.8638121 4.8547338 8.5084659 8.4980071 6.0519267 -1.7744783 13.4274247 1.0327356 9.9943887 -1.7744783 7.5015020 4.1795747 7.9685286 8.3482054 14.837431 6.286073 9.333248 13.630053 10.070138 11.014096 13.212197 12.608542 9.513667 11.033537 13.455923 11.243578 9.510201 9.066942 -1.774478 8.383987 12.964261 10.7560276 6.8327078 8.8056359 9.1531553 10.4556981 10.1058180 6.7212318 6.9935612 11.5693958 4.6683234 0.5473511 5.6848103 7.7155667 12.1234118 10.0258729 9.9524470 8.2253776 11.8919343 6.3234097 12.6293074 9.6605267 10.1015106 9.6490186 12.1517661 9.0157259 10.4018622 8.5461779 NA 8.5691516 5.9188632 11.1286944 8.4577982 10.1933240 10.8771018 7.2642962 13.5488896 9.9588164 9.8262196 13.2525491 10.0363506 10.0712594 2.3128394 TCGA-D8-A1XT 61 0 NA 506 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 5 NA NA 2 6 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 2.774378e-07 10.53497981 9.50640042 11.19691547 9.54267690 9.13699162 9.85113389 8.35550483 10.53497981 10.42711439 13.66734662 9.99385010 11.08434841 0.40359495 17.06079939 4.05899179 10.48365528 4.92719958 8.71197630 7.97652689 12.53317789 -1.91811503 11.73253658 8.07039362 9.02014935 10.75302909 7.48258856 2.25162821 11.02000235 10.17413598 1.88904515 7.46108731 7.85319850 -0.91838768 4.86307119 10.27461845 10.41262605 9.77650229 10.08417259 9.79337620 11.61929163 0.08174865 6.24661520 14.99560368 8.25194722 9.66854891 11.25147762 10.98972643 4.84989421 2.25162821 10.24881362 9.99609437 1.08168049 11.72849287 5.54931492 6.49956210 6.25163389 11.09869154 11.56653207 11.90587238 11.89969210 13.07429354 8.67136025 11.47402662 11.14841061 11.61321250 10.87185404 4.63629980 12.82032927 9.08803530 NA 10.79552524 9.12473652 3.17426259 6.46108813 11.10234194 10.26844246 10.78928405 9.91420363 3.16917140 4.58950584 13.62477122 11.23652730 10.41988846 9.18827209 1.19340000 0.04684200 0.27395000 -0.51969000 0.48131000 0.00013863 -0.02849100 0.51228000 -0.52677000 2.25980000 1.79820000 -0.00816240 1.12030000 0.00986690 0.00763920 0.02034300 0.02034300 -0.51280000 -0.00733390 0.00416320 0.01112100 -0.04102400 -0.49350000 3.65690000 0.52731000 -0.46621000 -0.46621000 -0.46568000 0.01768400 -0.48544000 1.17160000 0.02174400 -0.51681000 -0.51506000 0.00013863 -0.51897000 -0.51897000 0.01209700 -0.52677000 -0.53154000 0.04329900 0.01405100 -0.53685000 0.11169000 -0.90662000 -0.00567570 0.02286500 0.00986690 0.01419000 0.02918400 0.02034300 0.01251600 -0.01521800 -0.52213000 0.01474900 0.01474900 0.00000000 -0.51032000 -0.03204100 0.09173500 -0.49350000 -0.46014000 0.05736800 -0.43897000 -0.45040000 0.00083195 -0.50950000 -0.51764000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 8.2390562 14.5843701 6.3578335 9.8265431 3.1691714 11.0988656 1.7821569 3.6964168 8.8282235 8.7354501 -0.3333343 8.6036823 6.5287916 11.1087512 8.9050765 2.7255667 7.7092431 10.1175392 10.7625082 9.4750997 9.0701880 7.1665176 12.1757869 2.9885938 5.7327603 9.8130282 1.5411183 NA 11.1845051 3.4036358 12.3876284 12.0042936 8.1744663 9.3578337 13.3281158 8.4632522 3.8890646 3.6666771 -1.9181150 1.9885938 7.5655248 9.4210025 8.7629477 3.7821464 9.5924339 7.5329200 9.9026859 6.4260047 10.6028188 0.6666657 9.8486522 4.2314554 4.1902356 10.1517798 6.0775336 3.1691714 9.2844452 8.7470449 3.8890646 2.4036495 13.3593598 0.4035950 10.5675385 NA 9.8642979 3.9886029 8.0589891 8.9153900 12.953274 6.761190 8.875313 17.060799 10.394360 10.828224 12.533178 9.387201 8.917254 10.646097 13.613761 8.659138 10.248814 8.802808 2.251628 8.080300 12.355213 11.65890195 6.81641923 10.52905080 9.52930912 8.70376103 10.42545563 6.61309106 7.31772373 9.99385010 6.77867643 -0.33333429 7.78734169 9.07381193 14.49508920 10.73679266 6.68533610 9.21485141 9.52153998 4.98859835 11.27102724 9.77650229 9.98068841 10.13631355 10.77170718 10.30420220 10.61601210 9.60527115 -1.91811503 10.15217226 4.01244353 11.72849287 8.98182127 10.79100843 11.09869154 7.93969028 13.94676579 9.79466604 10.39175387 12.10234194 10.64108626 9.87042745 0.08174865 TCGA-D8-A1XU 56 0 NA 395 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.467973e-07 9.8068269 10.5389832 11.4098348 10.3017852 7.5348087 9.8035916 10.5389832 9.8876209 9.2112069 14.8262441 10.6063121 10.9514476 2.3671194 12.0235363 3.1040850 9.2612555 5.2846511 8.2056149 9.8836869 12.8996838 3.4825902 13.3018671 4.9653687 8.8642979 11.0181631 9.4474848 0.7821569 11.8084937 11.9524913 4.1744623 7.4042006 7.9964678 -1.8028895 4.8410422 10.5536384 10.6675911 9.9302017 11.0578854 10.5398167 11.2637802 1.7821569 11.4749097 14.5295902 8.4369880 9.2991556 11.0851686 11.1310615 5.3770960 3.6566222 9.3539015 11.1864035 NA 11.0249260 3.7207491 6.4211879 4.3671124 10.2028110 11.6692426 10.5120528 12.2069276 13.2092871 8.2511122 10.5453613 10.0974495 11.5066628 10.7677537 5.6729203 11.6769667 10.2882912 0.1972364 10.3761624 9.4963944 3.1040850 5.5980644 10.5309008 9.7741431 9.3309709 10.0387507 2.5191141 8.8749061 12.4976820 11.6394820 10.2126014 8.9140059 -0.33929 0.37611 0.31617 -0.33987 0.38386 -0.33929 0.39164 -0.35943 -0.34469 -0.35019 -0.35019 0.39065 1.03310 -0.33653 -0.34710 -0.34710 0.29406 0.36575 0.36575 -0.34354 0.37874 -0.34504 -0.34584 -0.34584 -0.34584 0.35675 0.35675 0.36094 1.05060 -0.33537 -0.33929 0.34762 -0.33987 -0.33768 -0.33929 0.39164 0.39164 -0.35943 -0.34469 -0.35053 0.41011 -0.29084 -0.35019 -0.34320 -0.34320 0.38039 0.37051 -0.33653 -0.34010 -0.34710 -0.34710 -0.34515 -0.35736 0.36575 0.36575 0.36575 -0.34159 -0.34228 -0.34125 0.37325 -0.34584 -0.34584 -0.33894 0.35724 0.36094 0.37726 0.38998 -0.34079 0.685 -0.337 -0.347 -0.347 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 -0.023 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 0.000 0.685 -0.337 -0.347 -0.347 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 -0.023 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 0.000 8.7727256 13.3215501 4.7363451 10.5684186 4.0551696 10.2007043 0.1972364 -0.2179270 7.6044539 7.8210679 -1.8028895 7.3594017 4.8265434 10.9127195 9.4773772 0.5191393 8.1160497 9.4349939 9.9895701 8.7670420 9.1956217 8.7708337 10.5724974 3.5547362 5.5281024 9.3739829 1.3670914 -1.8028895 9.8651850 4.0551696 11.9745445 12.4717102 8.3096260 9.6208276 8.3532695 9.4492605 7.3341776 1.0045373 -0.8028895 0.7821569 8.5224917 9.3011299 10.0121693 3.4825902 9.0190958 6.3264690 9.5453613 6.6192516 8.7059717 NA 11.6593052 2.7207381 6.1629713 9.4284196 6.0220815 3.7821464 9.4900831 8.3251809 6.8228958 0.1972364 13.9229521 1.1971734 11.0763867 NA 8.0767696 5.6483964 8.0157685 9.3296860 12.640172 5.744080 8.192954 12.023536 10.241581 11.010767 12.899684 12.117446 8.434396 11.151019 12.611740 8.237476 9.353902 8.508935 -1.802889 7.271328 11.142264 11.230265 7.082882 8.863410 8.468649 7.625547 10.486070 7.208414 7.848238 10.606312 8.142630 6.855398 3.897628 7.754248 11.295876 10.600731 8.041108 8.055167 12.794075 5.883687 11.622636 9.930202 11.258051 8.825632 11.704981 9.368989 10.933588 9.005346 NA 9.254731 5.151384 11.024926 8.026909 11.012157 10.202811 7.113066 13.322035 10.535644 10.473602 12.499540 9.802203 10.062920 1.897628 TCGA-D8-A1XV 84 0 NA 461 breast stage iia t2 n0 m0 female 2010 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 1 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 10.7570160 10.1220178 11.4702508 9.6054423 8.6337868 8.8965095 10.0903238 10.0340129 8.3560831 13.4355844 11.3665362 10.9189492 1.3651326 11.1339739 4.1724795 9.7419046 7.3696296 8.2030714 9.6121060 13.9945757 3.7980920 13.2051978 6.2623693 9.5657815 10.5082560 8.5784753 NA 7.4525905 12.1522143 0.6281670 7.4944108 7.3099865 NA 3.9011855 9.6365911 10.4923485 10.4871794 10.2845872 10.3718749 11.3949673 14.2096768 12.0474204 13.9003547 8.9577045 9.0984822 11.7808697 11.6083020 2.2131295 5.2131256 8.9605719 9.6523786 -0.9567955 10.9754147 2.6281670 3.5667665 3.2131295 11.0269061 12.2134379 10.0731773 11.1072689 12.8328354 7.6542250 10.8497495 10.9277520 11.0516285 10.9489630 4.9011807 11.8607832 11.4198679 NA 9.7871928 8.8665671 2.8526181 4.6579086 10.6393896 10.6407869 10.3082288 9.6300397 1.0432045 7.6168473 10.9304205 10.5005808 9.8972890 8.5765297 -2.0938e-01 8.0434e-01 8.0434e-01 1.2987e-01 1.2987e-01 -1.0284e-02 9.6758e-03 -9.7319e-03 -9.7319e-03 7.8038e-04 7.8038e-04 7.8038e-04 -2.0702e-01 -2.0702e-01 6.4170e-04 6.4170e-04 6.4170e-04 -9.5939e-03 -9.5939e-03 2.1411e-02 -1.4270e-03 1.6116e-03 3.1394e-03 3.1394e-03 3.1394e-03 -1.8529e-03 -1.8529e-03 -1.8529e-03 5.6402e-03 -2.0938e-01 -2.0938e-01 -2.0353e-01 1.2987e-01 -1.0284e-02 -1.0284e-02 0.0000e+00 0.0000e+00 -9.7319e-03 -9.7319e-03 -9.7319e-03 1.6127e-03 1.6127e-03 7.8038e-04 8.7085e-05 8.7085e-05 8.7085e-05 8.7085e-05 -2.0702e-01 -2.0702e-01 6.4170e-04 6.4170e-04 6.4170e-04 6.4170e-04 -9.5939e-03 -9.5939e-03 -9.5939e-03 -2.2683e-03 -1.4270e-03 3.1394e-03 1.0791e-02 3.1394e-03 3.1394e-03 2.8617e-03 -1.8529e-03 -1.8529e-03 5.6402e-03 -3.2374e-03 -8.6435e-02 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.8505544 10.6973884 4.8245591 9.0944090 2.6281670 9.4882147 0.0432045 NA 8.4778283 5.7014104 NA 5.6281612 -0.9567955 10.2593395 9.2899405 -0.9567955 5.3286031 9.2143767 11.0526786 9.3526762 10.5777070 7.8855500 9.9620631 2.3651326 9.9657843 8.9135647 2.0432045 NA 10.1186790 3.2131295 13.2165647 12.5564340 6.4778279 11.4710365 6.9440666 8.8697484 5.0204800 1.3651326 0.0432045 2.9500951 8.6942517 10.6305086 9.5460317 0.0432045 8.4774110 5.3099874 10.4799114 8.1621410 9.3366715 NA 13.0458391 0.6281670 10.1595438 9.5939658 5.4218864 2.2131295 7.4269038 7.3052948 4.6870551 NA 14.0831899 -0.9567955 10.7054232 NA 9.7557268 4.1306591 8.1647335 9.2440986 13.9544069 3.7980920 9.2428723 11.1339739 10.9504662 11.7076472 13.9945757 12.1507439 9.3239705 10.8335484 13.2279203 10.9308013 8.9605719 7.5189332 -0.9567955 7.4652644 11.2842892 10.1821116 8.2330243 8.8392394 8.5842966 9.1776261 9.4419115 5.0655680 8.5189332 11.3665362 6.6725569 NA 8.1385969 6.8190410 8.9073861 9.1980179 8.9959412 8.5108053 12.1295020 3.6281670 11.8014314 10.4871794 10.4122518 9.6073494 11.2508243 8.1385969 10.7462383 9.2453238 -0.9567955 9.3374990 2.3651326 10.9754147 5.8505544 10.7658153 11.0269061 6.9915672 14.0137552 10.3424078 10.6149525 13.1255984 8.8681586 10.1359570 2.0432045 TCGA-D8-A1XW 53 0 NA 1309 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.046104e-06 5.895554e-07 11.0528703 10.3404247 10.7884865 9.8721754 8.1426034 8.8795692 8.7219215 10.4186388 11.0111945 13.7513436 10.1775153 10.5619558 2.1745023 11.9897894 3.3120116 9.1578865 6.2563068 9.8154808 8.9195710 5.9042480 NA 10.5155497 8.3787578 9.3256884 10.6515965 7.1349006 -0.7324043 10.1570121 9.5332372 1.2675957 9.3754932 7.9628503 -0.7324043 6.0023312 10.0411736 10.0858049 9.5483931 10.6196656 9.8591446 12.1515065 1.5895718 4.5155485 15.9487440 7.7174722 8.5895504 11.2272620 10.9108020 2.8525782 1.0749849 10.0977413 11.4671412 0.5895718 10.9878665 4.5714038 8.0717530 5.2101356 11.6463235 11.0216746 9.2174488 12.1695262 12.7257725 7.0749774 11.4585272 11.3636900 11.1833149 11.0761843 5.6938883 12.1858333 10.4456645 1.5895718 10.4940344 9.0031783 5.2736949 6.9258333 10.5530244 11.1005123 9.6812502 10.2488327 2.4375474 10.1028831 12.7417718 12.4867908 9.5541800 9.5616685 1.034000 1.034000 0.904520 -0.029721 0.580950 0.099433 0.785240 -0.070536 -0.028355 0.075847 0.075847 1.691500 1.271400 -0.069716 -0.638500 0.555490 0.555490 -0.033677 -0.033677 1.256200 -0.044280 -0.578320 -0.081083 -0.081083 -0.080408 -0.069332 0.368210 0.368210 0.435130 -0.092569 1.034000 0.000000 -0.029721 -0.631590 0.054255 -0.174320 -0.174320 -0.070536 -0.028355 -0.028355 -0.111550 0.605210 0.075847 0.718160 0.655350 -0.027261 -0.053881 -0.069716 -0.099486 -0.638500 0.013074 1.110800 0.508460 -0.033677 -0.033677 -0.033677 -0.027535 -0.635950 -0.068127 0.379070 -0.081083 -0.081083 -0.064106 -0.069332 0.368210 0.463140 0.670850 1.329300 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 0.195 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 0.195 8.8365285 13.2790242 2.5895478 9.6063586 3.0749849 12.9333468 0.2675957 6.3709105 7.6404872 10.0648784 6.8145171 8.8597429 5.9611093 9.9042468 9.0693305 NA 7.1256036 11.1905783 9.7234632 8.4537365 8.2472473 8.2334064 12.7959543 4.9680631 9.2005752 10.2431120 4.2676257 -0.1473619 10.1433716 1.4375474 13.1849943 12.0208390 8.9294005 10.5642517 9.8818720 8.8009520 -0.7324043 4.1745103 0.5895718 2.0749849 7.8028976 8.8997086 9.8043552 4.4574498 9.4926850 6.2218191 9.8511751 7.9222585 10.4709703 8.5861650 12.7658482 2.7270491 5.4770750 9.5564825 5.6133372 5.8450509 9.2254499 9.3623599 6.7022503 6.6163503 13.3112904 1.2675957 10.8504699 NA 6.9576198 6.7188329 9.1931767 9.0949649 11.136636 5.668502 8.617456 11.989789 10.641847 10.823889 5.904248 9.866140 9.422599 11.117418 13.092979 10.440050 10.097741 8.208670 NA 7.971526 11.817166 10.223998 6.204260 9.415463 7.587294 8.336400 9.536848 7.920467 5.496440 10.177515 6.042410 1.437547 5.457447 7.277171 13.194706 10.272194 7.856337 7.370910 10.909448 8.303796 10.728209 9.548393 10.634491 8.989576 11.816444 10.979719 10.476771 10.165468 NA 10.413704 6.806782 10.987866 6.510796 10.559955 11.646324 7.793143 14.324175 10.194289 11.640351 12.168112 9.216719 9.851175 3.022510 TCGA-D8-A1XY 74 0 NA 503 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 4.161568e-07 10.96387592 10.24454544 11.06124582 9.57439031 9.51307123 8.22116996 9.12112085 9.73126302 10.08645990 13.31421407 10.18435754 10.56434978 1.72451931 13.08107812 3.35677767 9.68219860 6.73797873 8.29740559 7.64576217 12.91087800 2.92615127 13.11484631 2.10302758 9.19537836 10.84786157 7.53701412 -0.01246084 8.90641383 10.21917167 1.40261304 6.69260713 8.15914426 NA 4.33332354 10.17077234 11.14973201 9.89894249 11.53203204 10.08338705 11.66791004 -1.59727782 11.07457126 14.82994997 8.20110844 10.02234950 11.34839759 11.73112268 4.37987045 NA 9.63500902 11.76904683 -1.59727782 11.28504000 5.04644304 5.82043939 5.11683465 9.64278315 11.55439737 10.40715961 11.57610903 13.01292082 8.06792369 10.86304392 10.54381706 11.54437584 10.47539055 5.01729839 12.06024140 10.17902106 0.98753916 10.43910510 9.63500902 2.40348588 5.65051471 9.97291806 9.24807818 10.68219860 10.52120467 3.10302758 9.00528685 12.51486460 11.61204138 9.36837223 9.05004643 -0.435610 0.439570 0.596380 -0.111550 0.522930 -0.096383 0.197560 0.171060 0.191320 0.476900 0.476900 0.492510 0.065799 0.065799 0.173470 0.173470 0.173470 -0.464980 0.251990 -0.793520 -0.105130 -0.126420 0.632620 0.632620 0.632620 -0.152600 -0.144640 -0.146200 0.472210 -0.457910 -0.435610 -0.116390 -0.111550 -0.103420 -0.091684 0.203960 0.203960 0.171060 -0.454690 0.174230 0.226690 0.199440 0.476900 -0.118610 -0.118610 -0.118610 -0.134320 0.065799 0.065799 0.173470 0.173470 0.173470 0.173470 -0.437780 0.198780 0.169560 -0.731170 -0.113840 -0.122800 -0.464430 -0.466740 0.632620 -0.104210 -0.152600 -0.146200 0.472210 -0.110770 0.051672 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.105 -0.105 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 0.000 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.105 -0.105 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 0.000 8.03558322 13.62020499 7.50325013 9.44424714 1.00669298 10.15245750 -0.59749610 -0.59749610 8.05901289 8.30947863 -1.59727782 7.56351815 1.72451931 10.07235894 9.29816340 -0.59749610 8.89644352 9.91878052 7.51893164 10.59857531 9.05244606 8.09781619 10.77626885 2.92615127 10.06614612 9.76068968 5.33332712 NA 11.02738348 2.10302758 12.75090123 11.53845761 8.18722289 10.16745954 10.69001186 8.74577381 3.95718100 -0.01246084 -0.01246084 -0.59749610 7.93396973 9.30646983 11.54756483 4.46867454 5.58706790 6.63620698 9.98143242 7.72676856 10.03694532 NA 10.36295199 2.86201490 4.49005020 9.94297759 6.37963829 0.40261304 9.21396277 8.72789357 6.51633039 0.98753916 13.12587565 -1.59727782 10.28675850 -0.59749610 6.11683258 4.42495567 8.19375105 7.78196617 12.702998 4.017298 9.154969 13.081078 9.301990 11.017528 12.910878 11.258819 9.509805 10.539899 13.053191 9.775997 9.635009 9.204296 NA 7.847603 11.394110 11.049147 7.359690 8.718869 9.095203 8.801332 9.964830 6.157476 4.130511 10.184358 6.495345 9.642187 3.926151 6.296496 11.218572 10.372694 8.794905 8.649329 12.571730 4.017298 12.320327 9.898942 10.410316 9.842419 11.739792 9.973867 10.364399 9.652294 NA 8.823622 3.862015 11.285040 9.059013 9.777394 9.642783 7.031944 12.458887 9.608381 10.503579 13.484654 9.867644 9.256677 2.209952 TCGA-D8-A1XZ 81 0 NA 466 breast stage iiia t1c n2a mx female 2010 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 1 NA NA 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.456549e-06 3.81477e-07 10.0103867 9.4042905 10.4364599 8.9376033 8.2907022 9.1180300 10.0131292 10.4784553 10.1482823 14.2011618 11.1011904 11.2318825 0.7502635 11.5866962 2.1653010 8.8315128 4.1425686 8.9033812 9.4696402 12.7015360 0.9726191 13.6786771 0.4871776 8.9160628 11.3620446 6.4036938 -0.8346990 9.0699234 11.5721581 2.6888517 7.8447692 6.8127472 -0.8346990 4.7044460 10.3771771 10.1292686 9.4662133 10.0302487 10.4990032 9.7790783 5.3048396 10.7457829 15.2330487 8.5311299 10.5101395 11.0486958 10.6012194 3.7198734 NA 8.9334732 9.6071955 NA 10.6280467 7.7294386 6.7946459 4.7652006 10.3600456 12.0943622 11.0910286 10.4291448 12.9137437 7.1709135 10.9107530 10.7159899 10.7289618 10.2147970 4.7044460 11.4603402 11.3008377 -0.8346990 10.6415287 10.2550702 2.7502420 6.0418059 8.7577457 10.1511307 9.7398824 10.6056389 5.3551150 6.3501648 11.8856399 10.7925947 9.8880963 8.8482834 -0.045545 -0.404330 -0.414470 -0.194960 -0.194670 0.266810 0.185960 0.305640 0.271850 0.320550 -0.627160 3.656900 0.120300 -0.340710 -0.112120 -0.112120 -0.112120 0.195490 0.211410 -0.344620 0.606230 -0.516950 2.982500 -0.487260 -0.509940 0.396060 -0.636260 0.295590 0.625450 -0.858000 -0.045545 0.087052 -0.194960 0.266810 0.265240 -0.631240 0.186260 0.305640 0.271850 0.271850 0.263360 1.438700 -0.649360 -0.022378 -0.022378 -0.022378 -0.022378 -0.340710 -0.360260 -0.329050 -0.112120 -0.042698 -0.042698 0.195490 0.211410 0.220600 0.105650 -0.605290 -0.390890 0.475410 -0.518910 -0.487260 -0.029220 -0.570350 -0.153920 -0.159410 -0.185510 0.338960 0.120 0.120 -0.112 -0.112 0.195 0.195 0.000 0.661 -0.517 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 -0.404 -0.404 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.443 -0.629 0.272 0.272 0.622 0.622 0.906 1.543 0.000 0.000 0.196 0.196 0.120 0.120 -0.112 -0.112 0.195 0.195 0.000 0.661 -0.517 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 -0.404 -0.404 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.443 -0.629 0.272 0.272 0.622 0.622 0.906 1.543 0.000 0.000 0.196 0.196 8.8181338 13.0034586 9.6814812 9.4866532 0.1688987 10.4477981 0.1653010 NA 8.1553925 8.1151155 3.1652849 9.5862281 0.4871776 11.0150848 9.7864248 2.5576061 6.8306242 8.8898027 6.2527525 9.3389659 9.2210592 7.4576107 10.3451979 1.8657209 9.0669099 9.7054167 1.1653010 NA 11.9068611 1.7502635 13.0150359 12.5187803 7.1136557 10.3254754 9.3131297 9.1482823 2.9726375 -0.2498223 NA -0.8346990 9.7577458 9.4161794 10.4934027 6.5184360 8.0219166 6.6927661 10.3597378 6.9854674 9.2725059 NA 11.2200627 2.4132149 4.3150372 9.8211191 4.6060750 7.2124127 9.4161794 8.4155871 8.9367784 -1.8349564 13.8654846 1.3351974 11.2765875 NA 8.8377140 4.2313786 8.9726438 9.2192148 12.741003 3.920179 9.565634 11.586696 10.235074 10.256724 12.701536 9.989850 9.318207 10.806437 12.317336 12.549128 8.933473 7.925177 4.906756 7.520640 10.543042 10.6144375 8.6134049 8.9134816 9.5294235 8.3904962 10.2167051 7.2394305 4.9334735 11.1011904 5.8019140 0.4871776 5.4506900 9.0021123 10.7907694 9.8172374 8.3661876 8.0706759 8.8700570 7.8966079 11.6004472 9.4662133 10.2192146 9.3814283 12.4901022 8.5618935 10.1407785 8.8691922 7.8674616 8.8550335 7.9918370 10.6280467 7.9016905 10.5269585 10.3600456 6.9629504 13.9261906 9.6257446 10.2751194 11.9580791 9.5310644 9.4690695 3.6888517 TCGA-D8-A1Y0 65 0 NA 472 breast stage iiia t1c n2a mx female 2010 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 1 1 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 5.201959e-07 10.716494968 10.622004400 12.056259788 10.479540603 8.417465635 9.303182088 9.226487818 9.842421376 8.619238019 13.189083830 11.669800335 10.606257327 1.331074580 12.127346994 4.179057151 9.455702231 5.578990021 9.037041991 10.480557069 12.618025954 2.594094650 13.060939585 5.674471951 8.999140608 11.303900188 7.257063436 NA 10.656369443 9.817295640 1.009132150 8.739606126 7.524835513 NA 5.075224550 9.887953203 11.107661522 9.836875486 12.035140514 9.777320256 12.053956859 0.009203827 9.974920162 14.129130697 8.964531482 10.308338120 11.338511773 11.594685279 5.020364406 5.803552536 9.544897221 12.314413900 -1.990796173 11.471893736 5.822916208 7.067127772 4.777319762 10.120597664 12.348568387 10.911322548 12.030983398 13.120638371 8.265344530 11.322585836 11.036898488 11.857758822 12.006844640 5.148686044 11.994533126 11.845482171 -0.990796173 9.933577212 9.494965157 3.532067552 6.582783288 10.325983014 9.788444774 10.232232513 10.940981414 3.623843456 8.486894136 13.093404474 11.804668260 9.929860959 9.336688419 0.00166420 0.00166420 0.48045000 -0.02055600 0.24156000 0.47512000 0.45292000 -0.00761010 -0.55591000 0.01796300 0.01796300 1.01110000 0.02048300 -0.53470000 0.92270000 0.55974000 0.47942000 0.48854000 0.48854000 -0.54663000 -0.00401620 0.01460900 -0.50360000 0.02244400 0.02244400 0.04075100 0.02011300 0.03905400 1.09230000 0.00166420 0.00166420 0.02389200 0.02188400 0.02132300 -0.01945200 0.46127000 0.46331000 -0.54320000 -0.55591000 -0.54814000 -0.00332430 -0.00871460 -0.50629000 -0.01320300 -0.01320300 -0.01320300 0.02575300 0.00000000 0.00000000 -0.00097017 -0.51661000 -0.54603000 -0.54603000 0.48854000 0.02244400 0.02244400 -0.54663000 -0.53175000 0.00541390 -0.52379000 -0.50360000 0.02244400 0.06594200 0.04075100 0.03905400 -0.52133000 -0.00373950 -0.51971000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 -0.532 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 -0.532 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 0.625 0.000 0.000 0.000 0.000 9.5987871 12.5247125 7.5997232 10.2038927 4.1513474 10.6740275 2.3310746 -0.9907962 8.6043935 7.6886161 2.3310746 8.4368152 3.0091321 10.3026075 9.7315166 1.9160180 10.1419569 10.1005713 7.9647856 8.8436070 9.6316636 8.4290962 10.5639645 4.1176618 9.7061035 9.4046701 5.5248347 -1.9907962 10.3211679 3.5327035 11.9889183 12.1074970 9.1183135 9.6173907 10.4121479 9.1313168 8.3026074 1.5941185 -0.4058337 3.2185952 8.2319306 8.0752251 10.6978233 6.0315033 5.6779507 5.6238464 9.5851477 7.2234554 9.5775670 NA 11.2173703 3.0535284 4.9039541 9.7352944 5.2892554 5.9339479 10.7276687 9.1377748 6.8229175 NA 14.0710977 1.9160180 9.9553111 NA 7.1176608 5.8917788 7.8795005 8.0792570 14.391675 6.709576 9.023156 12.127347 9.877187 10.843804 12.618026 12.170740 9.502491 11.600775 12.977353 10.246943 9.544897 8.731090 2.468557 7.151243 11.499987 11.1369690 8.2875854 9.0189646 8.8356844 9.5390545 9.5988386 7.6109067 7.6238457 11.6698003 5.8100369 -0.9907962 6.9487153 7.7689075 10.9391339 10.6740275 6.9309774 8.3512105 14.0689662 7.8035519 13.2124682 9.8368755 10.0276838 8.6357577 11.3127740 9.6877361 10.6475718 8.8569764 NA 8.6335017 7.0832772 11.4718937 6.0859515 10.4364487 10.1205977 8.1150442 14.0543836 10.2594343 9.8837331 12.8437057 10.2029692 10.1313168 2.4014666 TCGA-D8-A1Y1 80 1 302 116 breast stage iiia t3 n1a mx female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.745411e-06 1.595268e-06 9.98906065 9.72040810 11.33845801 8.49938431 8.34809031 8.77460226 9.00338579 10.01273347 9.60203758 8.78947105 11.49445521 10.69995385 3.34217070 12.53854600 1.55365540 10.18666966 8.22352584 8.74619148 9.04989265 12.61627259 3.34217070 13.52707832 4.00113568 9.53950606 10.99812469 4.50363496 0.09423607 9.07152270 10.57679874 -0.32084648 8.88377659 6.73448744 -1.90562879 3.00113568 9.41335036 10.20765948 8.47794724 10.43270067 8.64883175 10.98222498 NA 8.60401793 14.43245692 7.12427540 9.45454133 11.20309395 10.61166621 4.73809767 5.93344753 8.55878842 10.83339052 0.41619119 11.10162060 7.66219909 5.84913108 5.33264707 10.02830227 12.07554253 10.50813516 11.57111561 12.29736139 8.05134491 11.27679237 10.76091069 10.53095434 10.70780214 4.51782369 11.21707085 11.21593821 -0.90562879 10.49618899 9.95338937 1.68997003 6.43853905 10.93049046 9.89149908 9.66314908 9.95494190 3.41617768 9.34572524 12.28105351 11.13778284 10.10267151 9.03822271 -0.41058000 0.79917000 0.79917000 -0.42529000 -0.41580000 0.01260000 0.00986690 -0.41542000 -0.40727000 1.12990000 1.12990000 1.19470000 0.00138680 0.02090300 -0.00584270 0.00430210 0.00430210 0.01447000 0.01447000 -0.42517000 0.01223700 -0.42721000 -0.03040400 -0.03040400 -0.03892700 0.00110930 0.00110930 0.00110930 0.37792000 -0.41058000 -0.41058000 -0.39397000 -0.40440000 0.01260000 0.00236760 0.00986690 0.00986690 -0.41542000 -0.40727000 -0.41553000 0.40801000 0.39463000 1.12990000 0.00000000 0.00000000 0.00000000 0.00000000 0.00146810 -0.01115900 0.00736090 0.00430210 -0.00699620 -0.00699620 0.01447000 0.01447000 0.01447000 -0.42517000 0.01223700 -0.42721000 -0.44122000 -0.45814000 -0.03040400 0.00083195 0.00110930 0.00110930 0.37792000 -0.42265000 -0.43453000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.799 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.799 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 0.000 9.54493855 13.53186489 10.28499351 9.82173795 -2.22769203 9.94677238 0.09423607 NA 8.95842888 9.09635463 0.09423607 8.15457410 2.26417609 9.91880392 9.12904186 3.64883355 7.39115937 9.62805925 9.30734701 9.88132920 9.48855016 7.11105114 10.52155569 4.09424452 8.98906065 9.66789000 2.48655993 NA 10.54596914 3.04844546 12.86635119 11.84128191 7.89837404 9.74349898 8.68389397 9.62513676 4.18170686 0.90157169 0.09423607 9.18104265 8.41617092 8.39345095 9.53459295 0.41619119 7.50975205 6.75245424 10.15561403 6.37964522 9.47902659 NA 10.96634055 3.30369309 2.73809767 10.18752170 6.25350904 NA 9.53511204 8.53718617 -0.32084648 -0.32084648 13.74243188 -0.32084648 10.60698329 NA 6.64883211 3.26416107 8.42851595 8.21448087 13.580088 6.416171 8.864907 12.538546 9.953393 11.354133 12.616273 11.244783 9.366873 10.418345 12.945162 11.034373 8.558788 9.558789 1.679199 7.358685 10.562358 10.9574612 6.6178054 8.7990112 9.6607727 9.2452594 10.1950398 6.7981464 8.4779472 11.4944552 6.2027664 -0.9056288 8.7153790 7.8073717 11.4137738 10.6377580 8.6640984 8.8772412 10.2868438 3.5860922 11.3118325 8.4779472 10.8052645 10.0661456 10.8906881 9.5046943 10.6418604 8.9184059 NA 9.1465526 3.0942361 11.1016206 8.7290537 10.7920792 10.0283023 6.5371858 13.8156892 10.1991692 10.3236626 12.0913341 10.4919175 9.6716716 1.7946862 TCGA-D8-A1Y2 71 0 NA 433 breast stage iia t2 n0 mx female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 4 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 10.6207697 9.8422958 10.7186070 8.5242616 9.3762856 9.1984396 8.9108271 10.1391567 9.9290551 12.7293995 10.5096050 10.6687596 0.4040311 13.0251599 1.7259592 11.3039471 6.5537706 8.5333068 9.3109145 12.0303032 1.2113861 12.9483846 4.8302908 9.6686952 10.5200428 5.3109145 -1.5959689 10.3406617 10.8250367 1.5739561 8.3124165 7.5410153 NA 5.1984391 9.1182694 9.9776710 9.2024956 11.5265283 9.2137920 10.2797732 2.1044709 10.7796063 14.5782473 7.1051574 9.0905243 10.4305473 10.6137817 4.5125493 4.4914876 8.8878396 10.6095116 NA 10.8567799 7.4429427 8.1555676 7.1319444 10.0420071 11.6959139 11.0011452 11.3989076 12.5523415 7.7855669 11.3658352 10.8451524 10.5210175 10.6027758 3.5333017 11.8442441 9.4360696 -1.5959689 10.5748877 9.7708925 3.1605169 7.2958075 10.2483372 9.5676734 10.4121022 10.0030068 6.1044625 9.8391731 12.9409388 11.9434250 9.5059995 9.3347611 -0.01061000 -0.01061000 -0.01061000 0.36711000 0.36711000 -0.02564900 0.37075000 -0.01171300 -0.01171300 1.08310000 1.08310000 1.08310000 -0.00190340 -0.00190340 0.01436700 0.82045000 -0.28617000 -0.00083000 -0.00083000 -0.41594000 0.00179820 0.00545050 0.42356000 0.42356000 0.42356000 0.82163000 -0.03413600 0.05256300 0.04291100 0.00281110 -0.01061000 -0.00548340 0.36711000 -0.36606000 -0.02564900 0.37220000 0.37220000 -0.01171300 -0.01171300 -0.01171300 0.00781500 0.00647400 -0.41450000 -0.00646860 -0.00646860 -0.00646860 -0.00646860 -0.00190340 -0.00190340 0.01436700 0.01436700 -0.39164000 -0.12443000 -0.00083000 0.01129700 0.01129700 -0.39594000 0.00179820 0.01450600 0.14864000 -0.37659000 0.42356000 0.39401000 -0.34627000 0.05256300 0.04291100 0.00017519 -0.37197000 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.149 0.149 -0.377 0.424 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.149 0.149 -0.377 0.424 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 0.000 9.91330398 13.74974089 7.16557534 9.82976427 3.51839665 10.34653833 1.98899364 NA 8.29428806 7.75496297 NA 8.06834675 6.50205526 10.66376702 9.52685170 1.98899364 8.71690689 9.01227870 8.97577633 10.57175549 8.59252618 7.24951361 10.77607264 4.53330793 9.90735263 9.77089246 3.72594833 NA 11.04087497 0.98899364 12.82042551 12.70530563 7.69634512 10.35785646 10.07246560 9.72595191 2.65195865 3.72594833 -0.01100636 -1.59596886 9.19843964 8.87569898 9.29504798 2.98899364 6.62328893 6.58393271 10.23533108 7.28666680 9.99928129 -0.59596886 11.65535827 3.53330170 3.65194718 9.87458106 7.23177895 7.55630832 10.02973267 10.15682257 8.80276740 2.98899364 13.87334763 1.40403114 10.95212320 -0.59596886 8.99741492 4.74387576 8.00393668 9.01965355 12.800964 6.018734 8.725952 13.025160 9.966743 10.652841 12.030303 10.651655 9.495459 10.575201 12.876588 11.501068 8.887840 9.206540 2.491494 7.573949 10.521342 10.901127 6.211378 8.950918 8.187022 8.762675 9.925507 8.288194 5.903870 10.509605 6.420833 NA 5.522966 8.313797 10.906856 10.621073 9.215399 9.472802 8.868569 7.563895 11.294685 9.202496 10.718040 9.764871 10.527822 9.612258 10.313542 7.815535 1.404031 9.183497 8.069360 10.856780 8.575201 10.735170 10.042007 6.743874 14.324935 10.920216 10.478165 12.961308 9.958133 9.661412 1.863463 TCGA-D8-A1Y3 61 0 NA 430 breast stage iiia t2 n2a mx female 2011 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 2 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.24847e-06 4.161568e-07 8.70895109 7.66026693 11.03022633 5.87524436 9.31836678 7.83393812 8.91540199 9.05204821 11.06230429 12.97231425 10.35637163 10.42155858 1.33611197 12.58668067 -0.07902077 8.51101175 6.54553908 8.27419549 2.97993387 11.87815072 NA 14.45011313 0.92105542 9.01874710 11.47547764 4.16897892 1.33611197 9.92245685 10.53514500 -0.66383089 8.68702533 4.74547937 NA 0.65800578 8.78832747 8.52343807 8.69693311 9.55283199 7.59582960 9.79500533 -1.66383089 8.07923729 13.82156959 4.82826091 9.81384435 9.58282675 9.14182998 2.58402444 1.50599252 7.20645080 9.90736480 NA 11.01094044 5.58401241 5.16897491 6.48583253 8.58756864 11.72665818 10.38150456 9.61859547 11.71627661 6.87911759 10.30547264 9.25345822 9.59111482 10.08637444 2.72839946 10.89139427 11.71451651 -1.66383089 10.49438031 10.85940309 1.43871868 5.06400762 8.27860046 8.45632402 10.33150000 10.62552877 9.82593410 9.62437547 12.06475075 10.69611017 9.72194849 9.10922525 -0.3314700 0.4701100 0.4384700 0.4978300 0.0176520 0.0138790 0.0580490 0.5351600 -0.4763900 3.6569000 0.4929900 3.6569000 -0.0010018 0.0281080 0.4829100 0.4829100 0.4829100 0.0906870 0.0906870 -0.9882300 -0.2983600 0.0487970 -0.9743900 0.0391390 0.0391390 0.0330940 -0.4729200 -0.4571700 0.0427000 -0.2782500 -0.3314700 -0.4512800 -0.4619800 -0.4778900 0.0301370 -0.4864100 -0.4737600 0.5351600 -0.4754600 -0.4908100 -0.4686800 0.4959300 -1.0184000 -0.4846200 -0.4581300 -0.4750800 -0.9587800 0.0000000 0.0000000 0.4829100 0.4829100 0.4829100 0.4912600 0.0906870 0.0906870 0.0906870 -0.9882300 -0.2983600 0.0459590 -0.4499900 -0.9743900 0.0391390 -0.4753500 -0.4124800 -0.4571700 -0.4597400 -0.4599500 -0.4455800 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.458 -0.458 0.038 -0.365 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.458 -0.458 0.038 -0.365 7.9078389 11.7649697 4.6580115 7.9471109 1.7955176 10.4314832 1.3361120 NA 9.8274383 8.9627078 NA 6.1042696 -0.6638309 10.6537814 9.5289953 2.3360834 4.4446074 8.0190808 6.9907223 11.6557583 8.1582906 5.4550280 11.1239887 2.4235513 8.8399120 9.2497236 5.6759373 NA 11.0144663 0.3360548 14.6955097 12.5455395 7.2429768 8.8138443 12.0099473 10.0460315 0.3360548 3.4235513 -1.6638309 NA 9.8453663 9.7990996 9.8183900 1.1434587 6.6761136 8.3900120 10.0221489 4.7955176 9.9434165 NA 9.8601381 1.3361120 2.0365385 10.1518497 7.6579243 3.1434424 8.8625853 9.2519654 6.0225875 -1.6638309 14.4133191 0.9210554 11.0548331 NA 8.0893027 3.2902769 7.2033646 9.5497979 11.8221016 6.7872966 9.0260841 12.5866807 8.8508004 11.9932929 11.8781507 8.2459790 9.8142591 9.9068906 12.1468586 13.1877376 7.2064508 8.9049922 0.6580058 7.7811013 9.7950053 10.30223107 3.95079499 8.15786025 9.98444381 9.34609660 8.53816099 6.35845429 4.21872693 10.35637163 8.57926011 -1.66383089 3.14344240 8.60698884 8.25643894 9.25121870 7.97452186 10.64186290 6.38593486 4.85964659 10.77466749 8.69693311 10.83991189 11.48567452 9.82392622 9.54371066 10.12439664 7.47051246 8.66026657 9.75723581 4.33608340 11.01094044 4.26682401 9.78729728 8.58756864 7.53575827 14.35432981 11.34241224 11.15306981 11.79769350 10.67537949 8.63758235 -0.07902077 TCGA-D8-A27E 66 0 NA 530 breast stage ia t1c n0 m0 female 2010 NA yes other specify 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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11.9265155 1.0112809 10.1929611 8.8772304 2.7306182 5.2807374 10.2541102 10.0272887 10.5071314 9.8355532 3.5258434 7.9787087 12.6611741 11.6186067 10.1108120 8.7775686 -0.00166290 -0.00166290 -0.00166290 -0.00448040 -0.00110870 0.00547450 0.00000000 0.00791750 0.00284540 0.00265210 0.00265210 -0.00041585 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00485790 0.00000000 -0.00202040 0.00513590 0.00513590 0.00513590 0.00097064 0.00097064 0.00097064 -0.00166290 -0.00166290 -0.00166290 0.00013863 -0.00448040 -0.00283500 -0.00401620 0.00000000 0.00000000 0.00791750 0.00284540 0.00284540 0.00180300 0.00180300 0.00265210 0.00000000 0.00000000 0.00000000 0.00000000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00194180 0.00485790 0.00000000 -0.00097017 0.00000000 0.00513590 0.00513590 0.00110930 0.00097064 0.00097064 -0.00166290 0.00208050 0.00819590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.9521145 10.8049958 0.2038902 8.8754625 3.5962434 10.6058675 -1.7958593 NA 7.9095541 8.5168043 -1.7958593 6.1350135 NA 10.4982550 9.0233022 0.5258684 7.1754647 9.0919037 13.8311418 10.5732461 9.9357581 8.3447513 10.2730355 3.6633560 9.9173079 9.7037673 3.4893246 NA 10.2676535 2.4518573 12.8782793 12.2507044 7.0773659 10.9636016 8.2619130 9.0704277 6.7623422 -0.7961098 -0.7961098 0.2038902 9.4351427 9.4922107 9.2283685 1.6633446 9.1708019 7.7235579 10.7002759 4.7737748 9.8965369 NA 13.9143781 2.3738431 11.8392995 9.6770589 5.8251674 1.0112809 8.2304447 8.2318274 6.1346584 NA 13.6926089 -0.7961098 11.1716881 NA 9.0446993 4.8904224 7.6026655 10.1511932 14.4683965 3.6301841 9.4613094 12.4444147 10.7418678 11.0104710 13.8366327 12.6898765 9.0850355 10.7413825 12.5035588 11.5223230 9.0272887 6.2753833 -0.2110638 7.1954431 11.1849535 10.757791 8.665401 8.461309 9.019305 7.924473 9.809619 6.691762 6.043126 11.910094 7.563671 1.525868 5.489325 5.712034 11.049412 10.037997 9.167540 8.682691 11.720976 4.470706 11.806047 10.863471 10.533998 9.786063 11.775437 9.128734 10.447393 9.778515 NA 9.437271 2.958806 11.651005 7.785122 11.086756 10.305897 7.198275 14.297750 10.782766 10.452146 13.225769 9.114564 9.487589 1.525868 TCGA-D8-A27F 40 0 NA 488 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 10.6775324 9.7466833 11.0179918 10.5097821 9.2730300 8.7562000 9.5207247 11.2313954 12.6568136 12.8996863 9.9151425 10.8653398 1.4369613 11.9060108 3.5073634 10.8444598 4.8565177 7.7018914 8.5265626 6.2749232 -0.2999155 7.9683609 9.4442871 9.8809509 11.0230687 7.9224066 2.0219416 7.1484745 11.9042794 -0.2999155 8.4737025 8.3771463 NA 3.7874743 9.5533234 10.5711492 9.9699199 9.2812146 10.0472663 11.9183754 1.4369613 8.6725152 16.2328924 8.2321619 10.9745862 10.9280309 10.7772748 2.9730234 0.1150332 9.6834826 11.4279344 NA 10.3275478 5.0692467 6.0634188 5.6307520 8.3208448 11.8724415 9.3611983 12.0599465 13.0828181 6.3582257 10.5262976 10.5879402 11.0985795 11.4669569 5.3534574 11.7611601 9.6527552 -0.2999155 10.6191256 9.8067950 3.9481990 4.6386126 8.8506075 10.7316003 11.5402674 10.0553650 4.8292965 7.1374195 12.8329420 11.5019917 9.8497612 10.1532846 0.0417410 0.0397610 0.0259520 -0.6149900 0.0668020 -0.6054500 -0.0287650 0.1382000 0.1382000 0.0000000 0.0000000 0.6059300 -0.6449900 -0.6136400 0.0171240 0.0022193 0.0022193 0.1103800 -0.6134500 0.0146090 -0.6096000 0.0190830 -0.6377400 -0.6377400 -0.6313100 -0.0666540 -0.1242100 -0.6719600 0.0098669 -0.6590100 0.0417410 0.0336900 -0.6149900 -0.6253200 -0.0347680 -0.6153700 -0.6153700 0.1382000 0.1382000 0.7467000 -0.0134020 0.0884030 -0.6623400 -0.6185300 -0.6185300 -0.6208300 -0.6208300 -0.6136400 -0.6222600 -0.6164300 0.0022193 0.0084743 -0.6323500 -0.5284900 -0.6134500 -0.0304040 -0.6191100 -0.6116200 -0.6332000 0.0119580 -0.0235660 -0.6377400 -0.6215900 0.4837200 -0.6719600 -0.6346200 0.5604500 0.4899200 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 -0.321 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 -0.321 7.3606039 13.2051225 3.0692553 8.6571158 4.4942556 11.7480466 1.5744891 8.8395654 8.7223817 8.2584346 5.3147255 8.5748315 7.7223820 9.8412696 9.5538433 5.1374175 7.9558295 10.8560970 6.1649009 9.3061107 8.9648084 7.9558295 11.8808555 2.5744891 9.5554017 10.5431499 2.2849878 -1.8847004 8.8873659 2.9730234 12.8149492 12.0441249 7.3935011 10.1030260 8.0144083 8.5631677 3.6069041 3.5073634 -0.8849668 2.2025118 7.8258581 8.7158937 5.8292965 5.7149653 9.1306408 7.1290717 10.1384593 6.7297608 10.2628923 2.5073634 12.7773304 4.7000124 5.8766029 9.6341865 7.1776378 4.3438697 8.5019916 8.2430459 5.5826584 5.4369780 12.8557809 -0.8849668 11.1053328 NA 10.2999268 4.4369813 8.8548319 8.3317975 12.050742 8.399297 7.958973 11.906011 10.026069 10.639103 6.274923 11.932135 9.649247 11.165240 13.005648 10.785929 9.683483 6.896411 1.815493 7.709376 10.797388 10.6141499 8.5513884 8.8318709 8.7306810 5.3245046 9.3935067 4.9976944 4.7149653 9.9151425 8.7037662 -0.8849668 9.4090977 10.7496901 13.9725222 9.5912914 7.7857075 7.9792377 9.7989233 5.4726047 10.9940335 9.9699199 9.3042582 10.1881889 13.1312068 11.6580833 10.5808729 10.1037362 NA 9.7298763 5.1374175 10.3275478 7.7962902 9.5071756 8.3208448 7.6831596 14.0507688 9.6624281 10.7848224 13.0249914 11.8319781 9.1408832 1.6999957 TCGA-D8-A27G 75 0 NA 409 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 1 4 3 3 5 2 0 5 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 4 0 4 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 4 0 0 0 0 0 5 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 7 0 0 0 6 0 0 4 0 0 0 5 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 2.389433e-05 6.693188e-06 9.9460340 10.0724326 11.8034434 9.6178186 9.2623641 9.3458399 10.2973015 9.8801593 9.6046813 8.3700396 11.4781139 10.3436851 1.1802115 14.2236818 3.1802115 9.2872453 6.3035981 8.3212273 8.7683944 13.4548012 NA 13.4125931 2.8322824 8.9849268 10.6863101 8.1294165 -1.6272707 9.1818244 9.5920287 2.5427781 7.8095714 6.6992893 NA 4.8647111 9.4382762 11.2267545 9.3270565 12.7584529 10.5490333 11.4942317 1.5428028 11.9351026 14.7290026 7.3819608 10.2037714 10.8386816 11.4141770 5.9427162 5.7304117 9.5663856 11.5962585 NA 11.2816280 5.4172551 6.6302482 5.5920294 10.4810578 11.7146569 10.4550092 11.8735775 13.0776824 8.2707055 11.1944349 10.7553437 11.2887395 11.3199491 4.8964220 12.5043152 12.2827532 -0.6270479 10.2838776 8.8727060 3.2372884 5.8240703 9.7886019 10.3024884 9.9657843 9.8601977 2.6207975 9.4669378 13.8563925 11.6167779 10.4018022 9.2370462 -0.47733000 0.46964000 0.46964000 -0.00356910 0.00013863 0.00208050 0.00166420 -0.00470790 -0.04447800 0.00263570 0.00263570 0.00000000 0.00305220 0.00305220 0.00861350 2.33910000 1.04640000 0.00240630 0.00240630 -0.00166290 0.00124810 -0.00083160 3.39790000 0.81942000 2.28380000 -0.02151000 -0.02151000 -0.02151000 -0.00180140 -0.00318590 -0.47733000 -0.00263220 0.00249690 0.00208050 0.00208050 0.00166420 0.00166420 -0.00470790 -0.04447800 -0.04447800 0.00194180 -0.00456950 0.00263570 0.01167900 0.01167900 -0.00613330 -0.00613330 0.00305220 0.00305220 0.01000600 -0.49788000 -0.48086000 -0.50657000 0.00240630 0.00000000 0.00000000 -0.00166290 0.00124810 -0.00083160 -0.49486000 -0.50006000 -0.49246000 0.00736090 -0.56206000 -0.02151000 -0.01711600 0.00166420 -0.00373950 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.41930207 13.71403144 2.83228244 10.20851580 3.00570538 10.99879723 1.54280283 -1.62727073 8.24476531 7.78437115 NA 8.11432694 3.27975357 10.59021201 8.87370187 1.37284069 10.46297253 9.28125267 11.94851755 10.08280556 10.14430836 7.10417938 10.39592137 2.76517403 9.05585479 9.94556030 4.62078579 NA 10.49050324 3.41725844 12.11432710 12.20278103 8.51624331 9.85365030 8.18503745 9.49244969 5.41725506 -0.04215967 0.69474650 2.89642686 8.27674184 8.58960583 10.51751842 5.25550451 8.69743433 6.37848388 9.96204315 6.57253198 9.80383535 NA 10.25817522 3.18021153 5.16727763 9.59471313 7.16678874 4.30359812 9.97416661 9.15831254 7.56021206 NA 13.30779490 5.04528569 10.01716711 NA 8.31830419 4.71271132 7.98940869 8.70713339 13.3978409 6.1143275 8.6396468 14.2236818 10.1046035 10.8727060 13.4548012 11.6814836 10.0345759 10.8374059 13.3168400 9.3707452 9.5663856 11.1828292 0.6947465 8.8199434 11.0845271 11.585508 6.100780 8.093959 8.535251 8.124404 10.523312 7.237046 6.411779 11.478114 4.912017 -1.627271 4.848593 7.617795 11.585812 10.455342 7.483995 9.312439 11.839319 6.212063 11.706487 9.327057 10.472537 9.134411 10.964149 9.852640 10.248993 9.043516 2.180212 9.218970 6.154221 11.281628 8.293213 11.489691 10.481058 6.786488 13.084258 10.340447 10.019869 12.172041 10.463634 9.830754 1.372841 TCGA-D8-A27H 72 0 NA 397 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 5 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.318999e-06 5.308552e-07 10.6722244 9.4925801 11.4382576 9.9064171 9.2738401 8.8986761 9.9176962 10.6920659 12.8028732 13.7821958 10.4676816 10.3691671 4.3116412 12.0876780 2.1540971 11.4922372 5.0386249 8.4760288 11.9019065 6.2738403 NA 6.4020280 8.2399307 9.0748704 11.1811562 7.4480147 -0.5462454 10.8641125 10.3609274 3.2610192 8.3769888 8.7482818 -0.5462454 4.3116412 9.3162985 10.1883708 8.9683751 8.7540136 10.0015197 11.2529428 1.6235860 5.8545418 15.3166858 8.1901309 10.7682416 10.5424494 10.5948103 2.2610192 2.1540971 10.3792156 10.0343907 NA 11.3773600 6.0005567 5.1401610 6.8630526 10.2956186 11.5028290 9.4994208 12.7578698 12.7269468 9.6122708 11.2782222 10.8830757 11.4990795 11.9160356 4.7755879 12.8742135 9.7688107 9.0442482 10.9171855 8.3022839 2.9051968 5.2738403 8.7169302 10.4266409 10.9774680 9.9233030 5.8882903 4.3363048 12.9451385 11.5869639 9.0637631 9.9324308 0.5640100 0.0095883 0.8022800 0.4337800 1.1806000 -0.0167040 1.4469000 -0.6830500 -0.0127130 -0.6394400 0.0197830 1.0865000 -0.6333900 0.0044411 0.0000000 0.5394200 0.5394200 -0.0257560 0.0045800 0.4026100 0.0143300 1.6495000 -0.6121000 -0.6121000 0.6375500 -0.0124380 0.0075000 0.0075000 0.5617000 0.0259520 0.5640100 0.5232800 -0.6296900 0.0058309 -0.5974000 -0.6406700 -0.6340900 -0.6830500 -0.0121620 0.0966700 0.0148880 -0.0063668 -0.6394400 -0.0120240 -0.6151800 -0.0052610 -0.6247500 0.0044411 -0.6844200 -0.6333900 0.0083351 -0.0523960 -0.1072300 -0.0257560 0.0045800 0.0045800 -0.0461770 0.0048579 0.3490900 0.0400440 -0.6298000 -0.5878400 0.3265600 -0.0421100 0.0075000 -0.6599400 -0.0098185 0.8558100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 -0.326 9.040501 14.428613 6.118997 10.809287 2.154097 10.370660 1.038647 6.174760 8.221846 9.225151 2.913090 10.311253 7.416557 11.049385 8.901777 2.845972 7.871513 10.201015 5.977223 8.678868 9.712280 7.582944 13.299004 2.625995 8.190063 10.390667 4.008254 NA 10.762000 3.453662 12.125644 12.686307 8.938484 10.408948 8.752869 9.441636 6.348479 1.453649 -1.546245 2.775598 8.416557 9.281004 7.273840 3.775588 9.841829 6.221846 9.325566 8.880974 10.645954 -1.546245 11.941501 2.038612 3.311648 9.245801 6.109371 4.407856 9.033920 7.503509 6.118997 1.038647 12.964672 1.453649 11.245435 NA 8.588088 4.038621 8.603408 8.932431 13.721137 6.459286 8.127854 12.087678 10.411822 10.519077 6.273840 14.093341 9.335540 11.393240 12.198915 8.420887 10.379216 7.996693 2.261019 9.124317 11.648418 10.512329 4.038621 9.316299 8.013994 5.126085 9.531979 6.419446 6.743681 10.467682 8.663114 5.261015 7.725124 7.946316 14.180544 9.102917 7.459286 8.835204 10.637297 6.126087 10.917806 8.968375 9.447307 9.398373 12.975200 11.212093 10.340120 9.587445 NA 10.115163 5.682481 11.377360 9.145405 9.611640 10.295619 7.882021 13.689301 10.017334 10.644103 12.270445 10.307361 9.345445 2.154097 TCGA-D8-A27I 58 0 NA 439 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 10.3269521 10.3541918 11.5370866 9.8082106 8.4513912 9.3906696 9.7331235 9.7940711 10.0230793 10.8661285 10.9957462 10.4896204 2.6136967 12.5365204 4.3711197 9.1965023 5.5342546 8.8370006 8.9192072 11.7038007 1.8063241 12.9072147 6.1929141 9.4906730 10.9405457 4.3298986 NA 11.8882606 9.7687474 4.1755645 8.9043655 7.9218106 0.8063653 5.5251512 9.6730972 10.4366005 10.1021023 11.4752184 10.1241229 11.4576841 2.6807969 10.8679296 14.4607083 8.3030008 9.9330379 11.4986583 11.0978878 5.9961582 1.6808194 9.3749230 11.9370112 -1.7784322 10.6460621 6.3609226 6.7566457 6.1929141 10.0275176 11.8434227 10.2423509 12.0475221 12.7562209 8.2616606 10.9920348 10.6454532 11.2696875 11.0992301 5.1161901 11.5628897 11.5470979 -0.1936347 10.6048051 8.9978039 4.0372065 6.0479200 11.0349517 9.7429713 10.1802860 9.8222129 4.1755645 9.1402342 13.5668454 12.2511757 10.3341362 9.4507906 -0.1007600 0.3887700 0.3915200 -0.0119890 -0.0119890 -0.0056941 0.2313600 0.0036538 0.0000000 0.2462600 0.2462600 0.2462600 -0.1224800 -0.1224800 0.0175790 0.0175790 0.0175790 0.0055882 0.0055882 -0.2361500 -0.2258500 0.0069789 0.0060053 0.0060053 0.0060053 0.0068398 0.0068398 0.0068398 0.2746200 -0.0979890 -0.1007600 -0.0238830 -0.0119890 0.0209390 -0.0056941 0.2313600 0.2313600 0.0036538 0.0000000 0.0000000 0.1458100 0.0980160 0.2462600 -0.0231100 -0.0231100 -0.0231100 -0.0157060 -0.4853100 -0.1307900 0.0175790 0.0175790 -0.1909600 -0.2457200 0.0055882 0.0055882 0.0055882 -0.2361500 -0.2299800 0.0069789 -0.1473000 0.0060053 0.0060053 0.0065616 0.0068398 0.0068398 0.2614100 0.0039207 -0.2353000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 0.000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 0.000 9.8889260 13.6515947 8.4681116 10.4904975 4.7715000 10.3618812 4.4881551 2.6136967 8.6848952 10.0279205 NA 9.0482768 5.5876920 9.9957461 9.0894216 2.2213822 10.3641162 9.8222129 11.0940457 9.7192226 9.7338102 7.9287298 11.4321944 4.1040179 9.1957856 9.8647761 5.4501885 NA 10.5108134 4.4111957 12.5630287 11.9177951 9.0051877 10.2681539 8.5365204 9.1394887 5.3506528 2.7449361 0.8063653 2.0287106 8.7370709 8.8507276 9.2561698 7.4645449 8.2422257 5.5700986 10.0656843 6.3557968 9.6029139 -0.1936347 11.5789229 3.1282604 5.6889776 9.6412731 6.6691983 6.1161880 10.0542609 8.4393285 7.9131144 0.5432979 13.6442241 1.6808194 10.5393487 -1.7784322 7.9252743 6.9628382 8.1491491 8.8679295 12.6390593 4.8937942 8.4951663 12.5365204 9.7581038 10.5556442 11.7038007 12.1684598 9.3253142 10.8973279 13.6448479 11.7817037 9.3749230 9.6920298 0.2213203 7.4405395 11.5452701 11.4618641 7.3403121 9.1192164 8.7912264 8.6158338 10.1701322 7.5855057 7.3351134 10.9957462 6.9729155 5.2437376 6.7950175 7.4363942 11.4727054 10.5305630 8.6601628 8.5331191 12.7224616 7.5455514 12.9077756 10.1021023 10.0758497 9.6142249 11.1936327 10.3422567 10.5288563 9.0035500 0.8063653 9.2187620 7.4210432 10.6460621 7.9509915 10.7274305 10.0275176 7.6539127 13.8534567 9.9411875 10.2157243 12.7106544 10.4344751 10.1051597 1.3912728 TCGA-D8-A27K 47 0 NA 1461 breast stage iib t2 n1a m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 3 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 10.9024011 10.0933885 12.1974752 10.2616403 8.3925188 9.5630649 10.5711161 9.9043634 9.9657843 11.9819013 11.1363877 10.4267099 5.8811384 13.4116138 4.8570255 9.6214865 7.2608744 8.6862130 10.4845793 13.1228111 4.0537196 14.1716145 7.7563308 9.1378644 10.8598083 5.0677936 NA 8.8930442 9.5125054 4.1886462 8.9204502 8.4297783 0.9662828 4.0251440 10.2153675 10.7517065 10.4504056 11.7690396 11.1536061 12.3819958 6.2761095 11.8310850 14.5431516 9.0091081 10.0677745 11.9555302 11.8486423 5.2516547 4.0251440 9.3038759 12.2826298 -1.6188274 11.4490620 4.2639358 6.7906821 4.6101094 10.7371932 12.0584606 10.6850723 13.3328494 13.1865819 8.1494758 11.2048578 11.1246112 11.5548125 11.5308798 5.4365750 11.8330177 10.5383225 NA 10.1671525 9.1494758 4.4043241 6.1428423 11.0246968 10.6739007 10.1634707 10.0851950 2.5512207 10.2520415 13.7149011 12.8083424 10.5278602 9.8407232 -0.00332430 0.92452000 0.92452000 -0.00456950 -0.01519100 0.00000000 -0.00618010 -0.01147300 -0.01147300 0.00847430 0.00847430 0.00847430 0.00833510 0.00833510 0.00319100 0.00319100 0.00319100 -0.00329920 0.00194180 -0.00327860 0.00569190 0.00235810 -0.00235530 -0.00235530 -0.00235530 0.00124810 0.00124810 0.00124810 0.01377200 -0.00332430 -0.00332430 0.00000000 -0.00456950 0.00000000 0.00000000 -0.00618010 -0.00618010 -0.01147300 -0.01147300 -0.01147300 0.43855000 0.44088000 0.00847430 -0.01546600 -0.01546600 -0.01546600 -0.02532900 0.00833510 0.00833510 0.00319100 0.00319100 0.00319100 0.00319100 -0.00329920 0.00194180 0.00194180 0.00055459 0.00569190 0.00235810 -0.52102000 -0.00235530 -0.00235530 0.00750000 0.00124810 0.00124810 0.01377200 -0.00691950 -0.02258000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 0.000 9.5233985 12.5115403 5.4365750 9.6896304 2.9010889 10.8987148 3.0251529 -0.6186059 8.8096517 7.5931797 -1.6188274 8.0660402 1.5511961 9.9657843 9.0051729 0.7031893 9.6787809 9.6083057 9.7703851 9.0124687 9.8093323 8.0233430 10.0426242 4.4036563 10.3784710 9.8791433 5.9511471 NA 10.1687859 3.0817316 12.6145367 11.8996987 7.5208426 10.4587749 8.0215364 8.8989608 4.5310383 1.9662459 1.5511961 8.8999448 8.1740818 7.9243232 10.2780023 4.3812903 8.6768425 5.5411617 10.3127677 6.3354886 9.6392685 NA 9.9987589 3.3812972 4.4898191 10.5065629 6.2298513 6.8117446 8.6827878 8.4352173 7.4740490 -1.6188274 13.6173431 2.2881814 9.6666938 NA 9.5021774 4.7906834 8.0572483 8.5834153 12.8136944 5.1886462 9.0359276 13.4116138 10.3692660 10.8065074 13.1228111 12.6266956 9.5008162 11.1777063 13.7486380 9.5729677 9.3038759 8.7222542 0.9662828 7.4872001 11.9251692 11.469417 7.873144 9.312768 9.274593 8.708844 10.611378 7.152781 8.234601 11.136388 5.648077 7.910722 8.306104 6.729710 13.111018 10.857531 8.243759 7.349958 12.313229 7.578509 12.061253 10.450406 10.253197 9.985845 11.272126 10.019275 10.773341 9.454764 1.381283 9.576670 7.756331 11.449062 7.285174 11.067685 10.737193 7.703220 14.108414 9.623275 10.403312 13.533022 10.938276 10.323439 3.551221 TCGA-D8-A27L 49 0 NA 499 breast stage iiia t1c n2a m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.080784e-07 10.7434244 10.2531585 11.9506651 10.3714154 8.0100245 9.5037621 10.2813699 9.7285359 9.8596202 13.0781027 11.2357686 10.3942368 7.8017071 12.6626435 3.7299116 9.7303766 4.9480962 8.7345098 9.9329898 12.5117446 6.1650557 13.4075643 7.7427406 9.3900799 11.1159110 5.3440260 -1.8847004 12.3084533 10.1274821 3.6070580 8.5633229 7.8139113 1.2851063 5.9289885 10.2318756 10.3515200 10.3690542 12.4681467 10.4303563 11.8089115 10.2772833 11.5029548 14.7142042 9.2482782 10.0265875 11.8912285 11.5787311 5.2341487 5.6697950 9.2807418 12.1012265 NA 10.9106376 7.1095601 6.8998415 5.5909403 10.5589274 11.7251934 10.2655887 12.5452672 13.0274880 7.9079968 11.1130919 10.6782766 11.4975606 11.4045052 5.5414715 12.2600243 11.6825687 -0.2999155 10.3916220 9.5005300 4.9615724 5.9606970 11.2132388 10.6150526 10.1046012 10.4343143 5.1264360 9.8579372 13.9001227 12.5973214 9.9859568 9.6239919 0.00917050 0.00917050 0.00917050 -0.04698900 -0.04698900 0.00332990 0.00000000 -0.00193990 -0.00193990 0.42435000 -0.28501000 0.64873000 -0.00277070 -0.00816240 -0.00553750 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.01532900 0.00410960 0.00027728 -0.00415460 -0.00415460 -0.00415460 0.00694350 0.00694350 0.00694350 0.41798000 0.00917050 0.00917050 0.00000000 -0.04698900 0.00332990 0.00332990 0.00000000 0.00000000 -0.00193990 -0.00193990 -0.00193990 0.00097064 0.00097064 -0.45319000 -0.00360110 -0.00360110 -0.00360110 -0.00360110 -0.00816240 -0.01425400 -0.00553750 -0.00553750 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.00249380 -0.01532900 0.00541390 0.00027728 -0.47765000 -0.00415460 -0.00415460 0.00124810 0.00694350 0.00694350 0.41798000 -0.00387790 -0.31354000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 0.000 9.7814307 13.7830390 9.8003936 10.1406924 4.0100279 10.2678085 2.6387689 0.9225785 8.0679479 7.7518312 0.1151664 8.6640287 1.5746344 10.3003919 9.2224237 2.2851359 9.6601712 9.8604608 9.7513782 9.4809824 9.4246887 8.0039502 11.0039500 2.5667421 9.3930753 9.7368009 4.8833911 -0.8847004 10.5224745 2.2851359 12.4853492 11.9907641 8.2826247 10.2220968 8.0621131 9.0115392 6.0924865 2.0220837 0.7001733 11.8306325 8.6417061 8.9071836 9.7062615 4.9978479 8.0009183 6.3000816 10.2963590 7.0130524 9.5069873 -1.8847004 10.2763386 3.7590599 4.4550576 9.4537538 6.2496843 6.1486291 9.8165132 8.8328831 7.9449293 -0.2999155 13.2506756 -0.8847004 9.9630471 -1.8847004 8.6543657 5.2649530 8.1704889 8.8949260 13.2003696 5.4371345 8.5990224 12.6626435 10.2278808 9.9669557 12.5117446 12.6156752 9.2662232 11.1517238 12.8467379 9.4017644 9.2807418 8.5425196 -0.2999155 7.3536118 11.8585685 11.352417 7.446124 9.088186 9.533059 8.735427 10.514105 7.477150 6.846526 11.235769 6.801707 3.363129 6.688855 6.984462 12.094364 10.555816 8.686011 8.509669 13.306266 7.866751 12.656221 10.369054 10.334678 9.552959 11.690391 10.313038 10.495938 9.689800 -1.884700 9.628969 7.384333 10.910638 8.862560 10.774179 10.558927 7.562290 13.618691 9.979006 10.211263 13.075254 10.606058 9.903925 2.115200 TCGA-D8-A27M 59 0 NA 410 breast stage ia t1c n0 m0 female 2011 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 10.8847063 9.8444469 11.6155979 9.5927700 8.6313652 9.8872881 9.5135525 10.4536837 10.8381521 12.7059887 10.6102089 10.3193440 0.8854182 11.1867165 3.3004459 10.6730414 5.6667708 8.7319459 8.5062417 5.6223769 2.3879139 9.0678051 10.1094125 8.8647504 11.3203865 5.6841539 -0.6994662 11.7844379 9.9334435 2.3879139 8.6155980 9.4501955 2.8854182 6.1269976 9.6414111 10.7490809 9.2590010 11.0690462 9.5759909 11.8489091 0.8854182 5.7350753 15.6686393 9.5400707 8.9622265 11.4514649 10.4976651 3.7267114 -0.6994662 9.7746612 11.0116852 0.3004166 10.8087383 8.4206862 8.1333385 7.2862907 10.7626950 11.6040864 9.7882885 12.0694597 13.0463327 7.8141761 10.9532933 10.6865749 11.6604724 11.9126258 5.5196174 11.9729842 9.5817988 3.9443056 10.7196186 9.6612955 3.8863160 6.5812187 9.2267443 10.5780264 10.5031844 10.9915376 2.8240142 7.9764055 12.5746809 12.3445009 9.6065101 8.9737573 -0.1016900 0.0000000 -0.1270700 -0.2709300 0.0411750 0.2087000 0.0873900 -0.1086200 -0.3613600 -0.3723400 0.4830300 1.5159000 0.0552300 -0.3613600 -0.0024938 -0.0024938 0.2307100 0.5861400 0.0431570 0.1249100 -0.2753500 -0.1956200 -0.2914200 -0.2914200 -0.2638400 -0.2787000 0.6845900 -0.2942600 -0.3277400 0.1919300 -0.1016900 0.3322700 -0.2924800 0.3685400 -0.1566300 0.0873900 -0.3272800 -0.5921400 0.0968160 -0.3516800 -0.1140200 0.1974000 -0.4013000 0.0342540 0.0342540 -0.0108030 0.0553730 -0.3613600 0.0421660 0.0348180 -0.0024938 -0.2934300 0.3473000 0.1124200 0.0431570 -0.3219300 0.0860880 -0.1403900 -0.3612400 0.0077602 -0.2914200 -0.2914200 -0.1436100 -0.2787000 0.1998400 0.1379100 0.4857800 0.3724900 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.279 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.279 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 0.000 10.0628304 13.3954745 4.5099048 10.6138983 5.5388516 10.5754089 6.4952059 5.1584299 8.9307155 9.1654083 5.5672351 9.5332351 5.0553345 10.9345787 8.8900995 -0.1146599 9.3455254 10.5391516 8.0181251 8.3732510 10.1700229 8.4952051 11.9261572 3.1584340 8.8151623 10.6678631 2.5483873 -1.6994662 10.3081764 3.4297365 12.0454924 12.5667225 8.5364625 11.0777036 10.0351580 9.1669547 6.8002942 3.3448427 1.1078218 NA 7.5950695 9.0112549 8.0164105 5.7516592 8.8762901 5.9939347 9.9991530 7.2013153 10.1285848 5.0419132 11.4277979 4.5292650 4.3665390 10.0258913 5.3214844 8.6313652 9.4463805 9.1545376 9.5238467 1.3004752 12.6610212 1.3004752 10.6441893 NA 8.7475317 4.2073385 8.3502970 7.7660147 13.623664 7.114230 8.577736 11.186717 10.456531 9.505020 5.622377 11.271453 9.360928 11.499507 13.169223 10.968003 9.774661 7.167727 3.000883 7.186145 10.742355 10.6483465 4.3228151 8.8012903 7.3338709 7.2691155 9.7089320 8.6380702 7.1078029 10.6102089 8.1412264 0.6223682 7.8082428 9.2006208 14.0180712 10.6375127 7.8759877 8.3393672 10.9332164 9.2170744 11.7345579 9.2590010 10.2374543 9.4988935 12.0806805 10.9812474 10.4803574 9.3859208 NA 9.5129022 9.3872481 10.8087383 9.0956763 11.0225685 10.7626950 8.2458921 13.0349463 10.4828427 10.4812900 12.7248115 9.8722010 9.9192927 4.3228151 TCGA-D8-A27N 36 0 NA 146 breast stage iiia t2 n2a m0 female 2011 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 2 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 2.427581e-07 10.581266406 9.751052756 11.581266359 8.788797601 10.088526437 9.370155996 10.406501381 10.125764996 10.268505158 14.167007978 9.960641009 10.804638215 0.405121035 15.615288902 2.405093798 9.869128343 7.326934567 8.362195456 10.096400494 12.731733364 NA 12.899198765 NA 9.384275426 11.070429111 8.454941628 2.492545424 9.944227714 12.255866082 1.990047220 7.980632581 7.202754651 -0.594878965 4.744941447 9.873208156 10.281993759 9.338046175 10.691939674 9.985351707 10.873462723 2.212444829 10.446752381 14.899292534 8.474717513 10.508046495 10.945221270 10.115469241 3.614544955 3.896949921 9.591826561 10.563071640 0.990083536 11.303505651 8.073978180 6.924729383 6.382373289 9.768680414 11.883230820 10.192995741 11.966858476 12.687168079 7.179880236 11.020033059 10.437755401 11.027602639 10.972336315 4.831360453 13.331157513 9.803836965 -0.009989098 10.358562197 8.896946289 2.205204813 6.497850241 10.100756545 9.507068949 12.859585295 9.432308044 2.212444829 10.505755591 12.896946308 11.393600411 9.544644571 9.520136785 -0.0352350 0.4301700 0.5184900 -0.5559100 1.1254000 0.0277930 0.0176230 -0.0203340 0.0347570 0.0106430 0.0106430 1.3301000 -0.0131860 -0.0131860 0.0063271 2.9580000 -0.5176800 0.3681400 0.0091104 -0.5475600 -0.0018612 0.5045600 2.1081000 3.6569000 3.3768000 -0.1295900 3.4290000 0.3619100 -0.0375490 -0.0352350 0.0120370 0.0117580 -0.5559100 0.0277930 0.0397000 0.0275770 0.0347570 -0.0203340 0.0347570 0.0081358 0.0082750 0.0082750 -0.5730300 -0.5346400 -0.5362400 -0.0145630 -0.0295070 -0.0131860 -0.0131860 0.0063271 0.9979100 -0.5552100 -0.5552100 -0.5587100 0.0055612 -0.0495770 -0.5006300 -0.0018612 -0.0293700 -0.0374130 -0.6048100 -0.6028800 -0.5646000 -0.5984200 0.3619100 -0.0375490 0.0179030 0.0235060 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 9.032627097 14.360811222 4.554840534 9.962556976 4.127558997 11.136412252 0.727005550 -1.595096878 8.588728500 7.609664111 -0.009989098 8.587475259 2.653014144 11.108131583 9.362920880 1.990047220 7.048948898 10.000816920 10.420508298 10.858878281 9.913516862 7.922762777 11.354372816 3.614544955 7.837634871 10.054798428 -0.009989098 NA 11.893184374 1.990047220 12.134713964 12.723565409 7.599850374 9.768680414 10.081050232 10.320972557 2.653014144 1.212444829 1.727005550 2.990047220 8.311983940 9.883862864 11.605991825 3.727016445 6.615277977 5.831357919 9.763744356 6.780132901 11.278345027 NA 11.423815022 2.212444829 4.019799751 9.238718563 6.411110961 5.920793488 9.437827794 8.960640864 8.489901734 0.405121035 13.614508492 0.405121035 11.505755542 NA 8.545922821 6.275457819 8.124482199 8.241143736 12.878065 7.742715 8.717976 15.615289 9.735450 10.915857 12.731733 12.111373 8.668362 11.152447 13.297636 9.566225 9.591827 9.706018 2.405094 10.078402 10.671001 11.0287461 7.4765559 8.7008621 8.5899687 7.3852326 10.2962276 7.5057552 8.8166042 9.9606410 6.8271585 2.6530141 4.5750158 8.3077095 11.2621022 10.5611763 7.8949414 10.0552475 9.3966151 6.5548405 13.4144460 9.3380462 10.6473741 10.6936709 10.5624401 9.9853517 10.6748044 8.4065014 0.7270056 9.0765901 6.4819092 11.3035057 8.2395642 10.9682895 9.7686804 7.6295533 13.7130766 10.7054458 9.8271580 12.1151463 10.8709146 9.2669556 2.2124448 TCGA-D8-A27P 64 0 NA 49 breast stage ia t1c n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 10.5533971 10.1049405 12.0945800 10.1466574 8.0486253 8.9335954 11.3116150 9.4490983 10.1391159 13.4188457 11.4860307 10.3628040 2.7437735 13.4369502 3.8262332 9.2166409 7.3910176 8.6421499 10.2237888 13.4674819 5.5142896 14.2065737 8.4923584 9.3248117 11.3035415 6.9370783 0.6562675 7.6105044 10.1616233 2.4636748 8.3960884 8.2487649 -0.3437325 3.3001677 10.1044242 10.3145195 10.3454323 11.9440203 10.5282131 11.5747985 6.8461322 11.3463059 14.8087908 8.3410388 9.7778285 11.9889040 11.7679327 4.3842294 2.9042336 9.0825727 11.6864578 NA 11.2320835 6.0138597 5.2108953 4.8851253 10.4290349 11.7122682 10.4462491 12.1850062 12.9710328 7.9759798 11.0893717 10.9668185 11.6070460 11.4856343 5.6220928 12.1103501 11.0893717 1.2412911 10.2256889 8.9440203 3.7063758 3.3001677 10.8712341 10.0746877 10.1857385 9.9160513 4.5632008 9.3251930 13.0280846 12.0386618 10.4215940 9.7945798 -0.00062633 0.56303000 0.56356000 -0.00298090 -0.00298090 -0.00367290 0.00000000 -0.00131910 -0.00367290 -0.00892420 -0.00892420 -0.00892420 0.00352040 0.00589780 0.00284130 0.00284130 0.00284130 -0.00145770 -0.00145770 0.00076001 0.00284130 0.00520280 0.00311900 0.00311900 0.00311900 -0.00034914 -0.00034914 -0.00034914 0.01300100 -0.00062633 -0.00062633 -0.00339610 -0.00298090 -0.00367290 -0.00367290 0.00000000 0.00000000 -0.00131910 -0.00367290 -0.00367290 0.01216400 0.01216400 -0.00892420 0.00395220 0.00395220 0.00395220 0.00395220 0.00589780 0.00589780 0.00284130 0.00284130 0.00284130 0.00284130 -0.00145770 -0.00145770 -0.00145770 0.00076001 0.00284130 0.00520280 -0.59093000 0.00311900 0.00311900 0.02672200 -0.00034914 -0.00034914 0.01300100 0.00034401 0.00561980 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3198658 12.8840743 6.2710185 9.6499540 2.2412605 10.6626340 -1.3437325 1.9782322 8.4970858 8.1720079 2.2412605 7.8889685 0.9782689 9.9816134 9.1857385 0.2412300 6.7700507 9.7020676 12.0483570 10.5033652 9.9860762 8.2356237 10.8180697 2.2412605 9.4596318 10.1126623 3.4111957 -1.3437325 10.0378508 3.6104993 12.7079417 12.2822450 7.3739840 10.3739844 6.6842142 9.0550516 4.4376672 0.9782689 0.6562675 2.9042336 9.0898935 9.3046655 10.7341251 4.0138642 8.8967296 6.4111957 10.3973535 6.8559797 9.6428611 -1.3437325 13.3413852 2.6563133 4.4891961 9.5683740 6.1772800 3.7855924 8.9195773 7.2673326 6.6897311 -0.3437325 13.6848184 NA 9.9765444 NA 8.6119580 5.4111957 8.0356860 9.0302605 13.8049779 4.2412682 8.8111261 13.4369502 10.3313829 10.8019217 13.4674819 12.1405015 9.3520668 11.0278124 13.0897630 8.7530232 9.0825727 9.3322649 0.6562675 7.8161792 11.6717230 11.1764355 7.0365088 8.9657843 9.2792749 8.1232611 10.5503639 5.7543397 6.1561539 11.4860307 6.2337366 4.4111957 6.9872254 5.5641586 12.2169990 10.3645296 8.3752002 8.2261636 13.6350631 5.1641024 11.4982005 10.3454323 10.2214100 9.7984149 11.5740530 9.8028766 10.7240784 9.5654509 NA 9.3988448 5.1641024 11.2320835 6.7223977 11.0299887 10.4290349 7.4923580 13.8325512 10.0329759 10.7037727 12.9165659 10.3449953 10.1616233 0.6562675 TCGA-D8-A27R 41 0 NA 307 breast stage iiic t2 n3a m0 female 2011 NA yes infiltrating ductal carcinoma 11 white not hispanic or latino NA NA 1 1 NA NA 1 2 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.387189e-07 9.1865956 9.3155687 11.0103221 8.6519318 9.4872148 8.6762776 9.6719256 9.9669690 10.6264188 14.4762506 11.0413938 10.9653892 0.4532278 12.9695323 2.5907457 9.2214257 5.8386720 8.6321551 7.0590913 12.2295098 2.5236372 13.6448558 5.4259326 9.3503607 11.7251712 6.8727808 -0.2836675 9.3236061 10.7542802 2.9386622 8.3732963 6.3934076 -1.8688056 4.0620526 9.3383275 10.4504208 9.5209445 9.2612403 9.0382038 10.6719256 8.5225568 9.2253909 14.1731435 7.9912361 10.1299002 10.5630720 11.0836905 4.1974015 3.4888620 8.6868612 9.7354030 -1.8688056 10.4833567 6.3309850 6.0016784 5.4800421 9.9374600 11.6803759 10.0661098 11.3397000 12.4464628 8.5407042 10.7803448 10.1688877 10.4658658 10.7214324 4.3601325 11.4483018 8.5343255 -0.8688056 10.6721678 9.8689832 3.0458798 5.9257289 10.1362359 9.8006413 10.9740564 10.5496929 3.7460225 5.4167148 11.9596481 11.2319756 10.5716633 8.9752344 0.235920 0.226630 0.404440 0.293900 0.222370 0.200910 -0.340670 0.200300 -0.353500 2.946100 0.482510 1.407900 0.227920 0.000000 0.214380 0.851850 0.245750 0.217140 1.341500 0.173020 0.221290 0.153670 -0.340440 0.384190 0.502210 -0.147980 -0.147980 1.191900 0.806940 -0.073209 -0.357380 -0.354420 -0.358740 0.200910 0.200910 -0.321240 -0.052801 0.220060 -0.353500 -0.353500 -0.051451 -0.059000 -0.356700 -0.353730 -0.353730 -0.346300 -0.341250 0.000000 0.000000 -0.352480 0.232100 -0.335140 -0.335140 0.217140 0.214680 0.214680 -0.334330 -0.346300 0.153670 0.072684 -0.340440 0.502210 -0.158480 -0.147980 -0.147980 -0.361020 -0.055364 -0.057654 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 -0.497 0.000 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 -0.497 0.000 8.8836938 12.5501541 6.1199973 9.5438831 2.5522049 10.4811473 2.4532542 0.1313261 8.9028026 5.7162749 -1.8688056 7.6331507 3.5575816 11.4224839 9.1987475 6.4532410 8.1592195 8.9602429 7.5385808 10.5999373 9.3372776 8.0738277 9.9458957 2.7751770 6.9892946 9.6830214 3.6859065 NA 10.9089795 0.7162447 12.3380987 12.7623197 7.4844604 10.1246055 8.7265707 9.9716977 5.1647380 2.0381903 -0.2836675 5.8386720 8.3309854 9.5742567 8.9474970 5.3012364 9.9360534 8.1757072 10.2395109 6.6029883 10.4132433 -1.8688056 9.8173759 2.5236372 3.6231645 9.4613002 5.6963778 4.9386669 9.0782194 9.4683776 9.2385304 -1.8688056 13.7605845 2.0381903 11.1950454 NA 9.0672149 5.3012364 10.0460721 8.8421196 13.838275 8.156453 8.520407 12.969532 10.095448 11.184051 12.229510 11.755423 9.432038 10.658504 12.528386 12.266221 8.686861 9.245055 1.716289 8.327301 13.623886 10.592793 4.886199 9.242449 9.654385 9.220101 9.639261 6.896185 9.704960 11.041394 6.886200 2.523637 5.001676 8.576111 9.871516 9.814747 9.057609 8.281060 9.736793 6.020055 12.319478 9.520945 10.040456 10.582267 11.109487 9.752907 10.086600 8.438514 4.701166 8.986213 6.678207 10.483357 5.453241 10.281378 9.937460 7.296221 13.369046 10.654385 9.842980 12.400367 10.311533 9.245055 1.590722 TCGA-D8-A27T 53 0 NA 398 breast stage iiic t2 n3a m0 female 2011 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.387189e-07 10.7639016 10.1172395 12.0259955 9.6657019 7.7871033 9.2788599 9.8990768 9.7647268 10.0681664 8.8844709 11.6444864 10.5913601 2.8000405 13.2703137 3.4077198 9.5370077 7.9661455 8.0641494 8.7183376 12.9032051 3.2657069 14.1159465 5.3146168 9.2995084 10.4084290 8.3964096 -1.5924841 10.0872049 9.5795271 3.1081564 8.4259250 7.5701160 -1.5924841 5.0801502 10.2045755 10.2182963 7.9095619 12.0842329 9.7762312 11.8979489 -0.5922666 11.0411741 14.5184731 8.5120092 10.2402193 11.2596690 11.2156834 5.1219686 NA 9.1684447 11.8322848 -0.5922666 11.1413757 6.3206146 6.8255770 5.4951867 10.4714569 12.0048462 10.4027853 12.1631340 12.7699426 8.5485545 11.1812761 10.7550637 11.3434423 11.2532148 5.3735090 12.1205741 11.0286319 0.4077334 10.3871500 9.0695029 2.8710945 6.1692756 10.5041105 10.2953262 9.7685719 9.8686925 2.6556495 10.0551832 13.3821842 11.8432648 10.1271136 9.4885423 -0.263960 0.332050 0.349410 0.048404 0.048404 -0.558370 0.052241 0.035734 -0.576640 0.030591 0.030591 0.030591 -0.275590 -0.275590 0.018803 0.018803 0.018803 0.049966 0.049966 -0.219970 -0.190110 -0.010508 0.610090 0.638100 -0.592050 0.000000 0.000000 0.000000 0.013632 -0.301920 -0.263960 -0.255970 0.048404 -0.579850 -0.565330 0.051530 0.051530 0.035734 -0.576640 -0.613160 0.045566 0.045050 0.030591 0.037924 0.037924 0.037924 0.037924 -0.275590 -0.275590 0.018803 0.018803 0.018803 0.018803 0.049966 -0.587160 -0.615660 -0.219970 -0.190110 -0.010508 -0.601970 -1.258400 -0.616710 0.033972 0.000000 0.000000 0.013632 -0.271880 -0.264560 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 -0.264 0.068 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.558 -0.558 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.150 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 -0.264 0.068 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.558 -0.558 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.150 9.7313425 13.7626284 8.8804155 10.4307860 3.2150728 10.0578790 2.4077334 1.2150573 8.7419981 9.1219704 NA 8.2289567 3.6171809 9.7436733 9.4210474 0.7296180 9.7069328 9.1012117 10.3546310 8.7586640 9.1872882 8.1150837 10.6392460 3.2150728 8.3720658 9.9391062 4.1626129 -1.5924841 10.0739487 1.9926959 13.3546310 12.2311915 7.9449433 9.6954371 10.1816881 9.1373455 6.3560927 1.5776343 1.5776343 5.8339906 8.4938611 9.4684206 9.9090644 6.2021415 7.5937399 5.3502391 9.5292584 6.0224344 8.8905327 NA 11.1239012 3.8995817 4.1626129 9.8496885 5.8933938 5.2903691 9.8439157 8.9908074 7.3677266 NA 13.9588021 0.9926959 10.2765474 NA 8.7126463 4.6931245 8.0659363 8.7149255 13.588933 5.065934 7.526666 13.270314 10.294797 10.524069 12.903205 12.652683 9.554293 11.233280 13.295707 10.985626 9.168445 9.133943 1.215057 6.919477 11.679480 11.631274 6.567596 8.775139 8.614739 8.421745 10.839909 7.497837 7.933246 11.644486 7.007637 5.253214 6.396410 7.564592 10.700334 10.421047 8.399247 8.874311 12.235067 6.871249 12.125025 7.909562 10.612907 9.936667 10.641045 10.104258 10.888515 9.566334 NA 9.578532 6.854809 11.141376 8.593839 10.733592 10.471457 7.320614 14.099305 10.071283 10.487876 12.982200 10.772407 9.537008 2.867165 TCGA-D8-A27V 62 0 NA 381 breast stage iia t2 n0 m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 3 4 4 3 1 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.271319e-06 1.699307e-06 10.5601966 10.7602874 11.9245024 10.1934406 7.6169803 9.0116446 10.7138420 9.5353341 9.4043808 12.5272068 10.5108653 10.5211969 1.9165531 12.2231089 4.2060493 8.2414713 7.0389376 8.5189305 9.0515374 13.3683815 1.0685332 12.7654245 4.5015028 9.1955425 10.9206051 8.4736855 NA 9.2459634 9.7062555 1.9165531 8.1085595 8.5089978 -1.2532573 5.7353001 10.0958970 10.3913734 10.3402403 12.2061755 11.2313128 11.6539759 -0.6684094 12.1168945 13.9295338 9.2779778 9.9496517 11.5042141 10.8600323 5.3465279 -1.2532573 9.5495360 12.4589816 NA 10.8887229 6.2101395 5.2935103 3.3613192 9.8083244 11.9722751 10.7037178 11.9442932 13.0920557 7.0297047 10.9311812 10.7831397 11.5493341 11.5785168 5.0864653 11.9182617 11.3444356 -0.6684094 9.5106580 9.5279754 3.3393655 5.1303214 10.5975839 10.5143864 9.4155007 10.4459713 4.1560082 10.3390728 12.8927071 12.4067231 9.9957293 9.2920630 1.02700000 1.12730000 1.14330000 -0.00995650 -0.01243800 -0.02197200 0.59314000 0.56863000 0.56863000 0.66826000 0.66826000 0.66826000 -0.00221680 -0.00221680 0.00027728 0.00027728 -0.63049000 -0.02082400 0.57523000 -0.02068700 -0.00995650 0.00420850 -0.00622860 -0.57970000 1.65860000 0.01153900 0.59836000 0.59836000 0.01750200 0.00499690 -0.04183800 0.00000000 -0.00995650 0.04202400 -0.01519100 0.59314000 0.59314000 0.56863000 0.56863000 0.56863000 -0.01890200 -0.02252600 0.66826000 0.59440000 0.10994000 0.59629000 0.67104000 -0.00221680 -0.00221680 0.00027728 0.00027728 -0.63049000 -0.62998000 -0.00539920 -0.63604000 -0.61412000 -0.61633000 -0.00995650 0.00996230 -0.62303000 -0.00622860 -0.57970000 -0.01780300 0.01153900 0.59836000 0.01750200 -0.00443120 0.03284500 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 0.000 0.000 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 0.114 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 0.000 0.000 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 0.114 9.7710629 11.6811360 6.9014341 9.1644683 2.8191572 11.2867438 -0.6684094 3.0685504 7.8499036 10.3090967 -1.2532573 7.9631556 4.3759708 9.8538329 9.2925455 -1.2532573 10.1565371 9.4409736 12.3081424 8.9850205 9.2915561 8.7037178 9.6680849 2.7008170 9.2238680 9.2289194 5.8603570 NA 10.4645063 3.2384659 12.1829369 11.7446772 8.4313643 10.6988110 8.6391587 9.4960662 7.1281583 -0.6684094 1.8340639 2.2701701 8.1378595 8.0786525 10.5044225 5.9265237 5.6781226 4.7689835 10.3679809 7.1194807 8.9039626 -2.2536012 11.4452119 3.3904751 4.0133997 9.8060852 4.7972257 2.7008170 9.4715559 10.0087106 5.0227406 0.9165531 14.2269011 1.9165531 9.8184133 NA 7.7648159 5.2857758 8.1151222 8.5015032 12.971520 4.641436 8.489767 12.223109 10.518724 10.973630 13.368381 13.018298 8.559218 10.981732 13.024775 9.681412 9.549536 9.770717 2.553975 8.688397 10.872675 11.23257083 6.92652491 9.04525128 8.57395841 7.36500133 10.95027885 6.00871097 7.56199890 10.51086532 4.86555760 2.39047509 7.96578428 6.20531040 11.56359937 11.00988494 8.43224080 7.64597251 13.23655778 5.68913140 12.49505550 10.34024035 10.70589326 9.32922812 11.69826476 9.89031779 11.09243679 9.47198201 0.06860203 8.32905900 4.22234862 10.88872286 3.17288750 10.86512862 9.80832439 7.81001116 14.05164364 10.38979555 10.39654549 12.01902685 10.04353193 10.30933515 0.06860203 TCGA-D8-A27W 55 0 NA 373 breast stage iiib t4b n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 6.935946e-08 10.1089093 10.5241871 11.7019708 10.2032204 9.4372350 8.9604639 10.6105041 10.3926335 9.7180338 15.3920820 11.2564330 11.3374714 -2.0267928 13.3369925 3.8060869 9.1475016 6.4036529 8.5440042 8.5731128 13.1616343 -1.0267928 13.1508531 1.4326388 9.6084646 11.5838788 9.4020835 -0.4418303 11.0286519 9.7167721 2.8311881 9.1887330 6.8280679 0.5581697 6.0500162 9.5263492 10.2539707 9.5459002 9.3660540 9.3395222 11.5764785 12.5029965 10.0453325 14.3635872 7.7200164 9.9299355 11.5814548 12.2133205 3.9955659 6.3307520 9.2394009 10.6202086 0.5581697 10.5833020 6.3952651 6.5006762 5.2305873 10.8708563 11.7395218 9.9540535 11.1175395 12.8013860 9.2211274 10.9458208 10.3651308 11.1165832 10.9986856 4.9844253 11.6413093 12.4176325 -2.0267928 10.0649658 10.2637949 1.9732072 6.1481247 10.2792616 10.3138846 10.7849760 11.1597785 4.0606613 6.4244115 11.3750128 10.6889474 9.6264928 8.5335326 -0.2366700 0.4461200 0.5713000 -0.0396650 -0.0396650 0.3236600 0.2325100 0.0087528 -0.5851000 2.4772000 0.0592230 2.3085000 -0.0927420 -0.0927420 -0.2477800 1.4613000 -0.3075700 0.4454500 0.4454500 0.1081800 0.4582000 -0.0550950 -0.0977190 0.9371200 0.9371200 0.3782500 0.7372000 0.7372000 0.8184500 -0.2366700 -0.2366700 -0.6594700 -0.0396650 0.3236600 0.3236600 0.2325100 0.2325100 0.0087528 -0.5851000 -0.5851000 -0.0927420 -0.0927420 -0.4972600 -0.2931300 -0.2931300 -0.2931300 -0.2931300 -0.0927420 -0.0927420 -0.2477800 -0.3219300 -0.2967400 -0.2967400 0.4454500 0.4454500 0.0000000 0.1081800 0.4582000 -0.0890370 0.4151300 -0.0945920 0.9371200 0.0576530 -0.3886200 0.7372000 0.8184500 -0.2552700 0.2443500 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 -0.080 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 -0.260 -0.293 -0.293 0.120 0.120 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 -0.080 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 -0.260 -0.293 -0.293 0.120 0.120 9.0024871 12.0067090 4.7011221 9.2764099 2.7805621 10.3778093 1.7805621 NA 8.0566794 8.1630247 2.4967691 7.6906706 4.3825912 11.0835201 9.3102642 4.5277898 7.4182144 10.6188583 10.9540536 10.9627718 9.9043363 8.3074732 10.6157030 3.1826605 10.6392019 9.7993511 3.0606700 3.4326254 10.9781226 1.1431322 12.3654503 12.5320989 7.5525162 10.2080174 8.0433210 10.8687753 6.3698050 2.7805621 NA 5.0606613 8.4800033 9.0626504 10.0918166 4.0606613 7.5089420 6.5989086 10.6671225 6.9703797 10.7600821 -2.0267928 9.4509582 5.1531081 4.1826526 9.2347719 4.9106607 7.9647221 8.4987208 8.8920631 11.7331921 NA 13.7566331 0.2951352 11.3456569 NA 8.8527832 4.4967627 7.9788243 9.0439919 14.633937 6.864983 9.183262 13.336992 10.236763 10.886650 13.161634 12.974344 9.116583 11.927029 12.303557 12.168265 9.239401 9.686586 2.880098 7.988615 12.236249 10.753535 8.928850 8.068597 9.736827 9.858134 9.667993 6.714667 10.086291 11.256433 6.138106 3.182661 6.244663 8.972495 11.570089 9.563787 9.526800 8.752098 12.206370 7.912779 10.780406 9.545900 10.275268 9.458526 10.464301 9.853931 10.478763 9.818690 6.523946 8.553308 8.401560 10.583302 7.017595 10.530185 10.870856 7.507016 13.396513 10.435702 9.842794 12.734959 9.589749 9.087593 3.432625 TCGA-D8-A3Z5 54 0 NA 1015 breast stage iiic t2 n3a m0 female 2011 NA no infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 2 3 NA NA 3 3 3 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.774378e-07 9.87939379 9.03004248 11.73811063 8.86841854 8.52268745 8.63919019 11.27708110 8.65752175 10.65296074 11.55123707 11.52135354 10.18551214 2.25056751 13.97671500 2.90263318 10.13363737 7.77411958 8.53331532 9.82420491 12.95254479 4.39739911 13.89322187 7.93905787 10.16158151 10.62373356 5.65265571 NA 9.01590312 7.96283876 0.02814477 7.96283876 6.64287482 0.44318227 5.79193125 9.72629106 9.40682129 9.69113020 10.46001104 9.74355536 11.38535068 9.26656989 11.88536872 14.43266378 8.21907653 10.12048194 11.08480294 10.32928037 5.80952506 4.39739911 8.37836769 11.42334233 -1.55681773 10.05007065 4.59294732 4.44320216 3.44320879 9.39083962 11.79882915 10.63734398 11.95050188 12.45905335 8.60054964 10.28122485 10.48349244 11.00568370 11.44443501 4.85259318 11.17197363 12.98163422 0.44318227 10.41510551 8.30273761 4.91893477 3.14363831 10.69675484 9.90876908 10.48246453 8.77187766 4.39739911 10.36578712 13.91246299 12.11396962 10.60842385 10.46175067 0.00221930 0.80694000 0.80694000 -0.00622860 -0.00622860 -0.00609040 -0.00443120 -0.02411400 -0.02411400 0.00000000 0.00000000 0.00000000 0.00277450 0.00277450 0.00110930 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00576050 -0.00152430 0.01126100 0.00583090 0.00583090 0.00583090 0.01014600 0.01014600 0.01014600 0.01251600 0.00221930 0.00221930 -0.00396890 -0.00622860 -0.00609040 -0.00609040 -0.00443120 -0.00802340 -0.02411400 -0.02411400 -0.02411400 0.40294000 0.39197000 0.00000000 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00277450 0.00277450 0.00110930 0.00110930 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00512270 -0.00576050 -0.00152430 0.00875170 -0.44340000 0.00583090 0.00583090 0.00360760 0.01014600 0.01014600 0.01251600 0.00263570 -0.40013000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 0.000 8.57248575 11.86605595 2.44320879 10.45128118 2.59943682 11.18023882 1.90265247 3.39739227 9.62683809 9.25457751 -1.55681773 7.92903229 6.02063110 9.10052122 10.02063165 2.90263318 8.95297765 9.45722326 9.99298746 10.26855908 9.74178094 7.60307438 11.40103031 2.76513158 10.38864655 10.10141424 5.91893716 0.76511036 10.61594278 4.85259318 13.45373086 12.16162861 7.92500248 9.92802560 7.72860489 9.32355157 5.64287482 1.76511036 0.02814477 3.35008701 9.52135349 10.25658317 10.00401325 6.94702905 9.04559532 8.26657012 10.49509142 4.85259318 9.40320465 -0.55681773 11.85113436 3.08705543 5.19808942 9.52442653 6.87770622 5.82690689 9.77859315 8.07801361 9.71990882 0.02814477 13.96685659 -0.55681773 10.52302084 NA 7.80075498 6.55694435 6.72397351 8.34255963 12.449047 3.691132 8.167717 13.976715 10.174097 10.323934 12.952545 12.672322 8.986911 10.278858 12.830412 11.812800 8.378368 7.468342 1.250537 7.434725 11.178124 11.2331439 5.7005895 8.6635691 9.5935848 7.1880369 10.8635499 6.3857175 8.3181840 11.5213535 5.6816067 1.4431823 8.9509973 6.3338316 11.3338471 10.5588967 7.8440824 9.6708187 11.5789120 7.9784782 11.2823120 9.6911302 10.6268382 10.6499119 11.5280111 10.9161474 10.7257120 8.4821218 NA 9.9282169 8.0486825 10.0500707 4.6330301 11.4920302 9.3908396 7.5621440 14.0781272 10.0025799 10.2569840 12.5853098 11.2505577 10.4704176 0.4431823 TCGA-D8-A3Z6 56 0 NA 563 breast stage iiic t3 n3a m0 female 2011 NA yes infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.774378e-07 9.600916 8.808098 11.889593 8.657031 8.640544 8.740079 10.660832 9.175697 10.886849 9.304630 10.613945 10.096741 2.197614 12.971681 1.975190 9.696307 5.849677 8.037703 9.006794 12.630142 2.638167 13.373150 6.666369 10.060406 11.033876 9.248226 NA 10.658495 9.142626 1.197614 8.266762 6.642911 -1.609552 5.423669 9.777724 9.881597 10.434981 10.155946 9.801756 10.888097 -1.609552 11.055137 15.091227 9.605996 10.810205 11.076964 10.484323 4.344438 2.712178 7.652340 12.038940 NA 9.279749 4.675647 5.019600 4.118169 9.987832 11.498933 10.497789 12.017893 12.449674 8.764198 9.935692 9.925462 11.168528 10.904713 3.975208 11.300888 11.669711 -1.609552 10.165855 8.271359 4.272889 3.944830 10.896801 9.528517 9.871035 9.101051 2.849679 9.940511 13.715164 11.368956 10.051578 10.025056 -0.01257600 1.08630000 1.09530000 -0.00733390 -0.00733390 -0.00401620 -0.01028000 -0.01395300 -0.01697900 -0.60274000 -0.60274000 0.56650000 0.55726000 0.00083195 0.00000000 0.00000000 0.00000000 0.27033000 0.25103000 -0.00443120 0.56596000 0.00000000 -0.01023200 -0.01023200 -0.01023200 -0.00733390 -0.00733390 -0.01807800 0.00404240 0.00263570 -0.01257600 -0.00664320 -0.00733390 0.01978300 0.00083195 -0.01028000 -0.01565200 -0.01395300 -0.01697900 -0.01697900 0.56507000 -0.02274400 -0.60274000 0.33500000 0.33500000 0.33500000 0.34080000 -0.91364000 0.57273000 0.00000000 0.00000000 0.00000000 0.00000000 0.27033000 0.26137000 0.26137000 -0.00443120 0.56596000 0.00000000 -0.58951000 -0.01023200 -0.01023200 -0.29331000 -0.00733390 -0.01807800 0.00135520 -0.00227570 0.01251600 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 -0.015 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 0.108 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 -0.015 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 0.108 8.2497800 13.5452213 5.5399932 10.4489133 1.0061185 10.2004150 1.3902274 NA 9.3767983 8.2805091 -1.6095524 7.0607953 1.7121555 9.8900910 9.6088083 1.5601769 7.6334189 9.0662020 10.5769783 11.0784954 9.7726854 7.0662022 11.5278766 1.9751899 9.2590677 10.2373024 4.4563331 1.1976138 10.7247977 2.0906841 12.4686461 12.3850404 7.7211621 9.4098358 9.4188418 9.6268572 5.5501157 0.9751899 0.3902274 1.1976138 9.1096338 10.4740567 10.2644580 3.3902412 9.0085754 8.3603511 10.3375167 6.1249546 9.8841004 NA 10.9676738 3.0906841 4.7652854 9.4986715 6.9208459 4.3675248 9.4434921 7.2482265 10.5333093 -0.6097726 13.4403488 2.0906841 10.2036254 NA 6.6045636 6.0484564 6.9714458 9.0493490 12.898705 4.367525 8.536177 12.971681 9.958201 10.664623 12.630142 12.243750 9.150641 10.402870 13.270020 9.043986 7.652340 8.263689 2.090684 7.338612 10.748896 11.4325884 7.9255206 8.3195032 9.2682959 7.7008579 10.8124990 6.7825619 8.7543798 10.6139451 6.9638925 4.5601708 6.8248735 6.3078565 10.8414562 10.5007284 8.1198656 9.3831833 10.8305951 5.1451312 11.4915478 10.4349806 10.9759118 10.4512786 10.9551090 10.6988685 10.8943192 8.6744907 1.7121555 9.9181814 5.4987710 9.2797489 7.1484684 11.2316128 9.9878320 7.0591303 12.7502691 10.1629719 10.3455317 12.9725047 10.6529271 9.6003075 0.7121996 TCGA-D8-A4Z1 68 0 NA 659 breast stage ia t1c n0 m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.080784e-07 10.313920 9.526640 11.823452 9.215215 8.106573 9.212721 11.340149 9.714634 11.231013 13.096802 11.063281 10.560377 3.359718 13.337504 3.497229 10.490551 7.355207 8.911239 11.337003 12.334138 4.991993 13.302018 6.968533 9.809829 11.054604 4.895778 NA 11.260892 8.549548 2.207705 8.944686 7.484878 1.037804 5.082187 10.103884 9.746879 9.549548 11.823656 10.205213 11.424466 12.662933 11.333277 15.076050 8.436453 10.395347 11.291347 10.975905 6.015076 4.037795 8.618996 12.440940 NA 10.683003 6.227620 6.247248 4.125254 10.142394 11.874240 10.251507 12.427830 12.868806 7.883285 10.630719 10.766664 11.059469 11.465632 4.991993 11.331267 12.088494 NA 10.399739 8.715515 4.420806 4.622761 10.653885 10.208972 10.372627 9.282159 5.247248 9.266614 13.697958 12.601111 10.251507 9.842733 0.00708260 0.00708260 0.00708260 -0.00401620 -0.00401620 -0.00263220 0.01363200 -0.00235530 -0.00235530 -0.02831700 -0.02831700 0.31785000 0.00055459 0.00055459 0.00263570 0.00263570 0.00263570 0.00138680 0.00138680 -0.00332430 0.00097064 -0.00470790 0.00527490 0.00527490 0.00527490 0.00485790 0.00485790 0.00485790 0.00402430 0.00708260 0.00708260 -0.00207840 -0.00401620 -0.00263220 -0.00595220 0.01007900 0.01265500 0.00485790 -0.00235530 -0.00235530 -0.00290910 -0.00290910 -0.02831700 0.00000000 0.00000000 0.00000000 0.00000000 0.00055459 0.00055459 0.00263570 0.00263570 0.00263570 0.00263570 0.00138680 0.00138680 0.00138680 -0.00332430 0.00097064 -0.00470790 -0.10368000 0.00527490 0.00527490 0.00055459 0.00485790 0.00485790 0.00402430 -0.00526100 0.00666530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2892777 12.3233420 6.0821895 10.6543441 3.6070462 10.8523777 4.1252543 3.0378039 8.8467594 9.1989273 -0.9621258 8.1351690 3.8957776 9.2690165 9.8809311 0.6227430 10.2815643 9.6816515 10.6208781 10.3715096 10.1460648 7.7207901 11.5507826 2.4972291 10.0293170 10.5251329 5.3953473 NA 10.7571841 5.4640605 12.5716117 12.1245950 8.4661556 10.2648094 8.2077201 9.2239095 5.9803087 -0.9621258 NA 2.3597179 8.9977971 9.5740425 9.6861528 6.0150760 9.7920649 7.1463202 10.2350120 5.2666142 9.6816515 -0.9621258 12.3448537 3.8957776 5.7792623 9.2747064 5.8472102 5.8451513 9.8183350 8.6616769 9.7563281 NA 13.4639290 -0.9621258 10.6784921 NA 7.8386953 6.7312824 7.8451500 9.0930776 12.3728143 4.1252543 8.8547790 13.3375041 10.3647865 10.0746557 12.3341379 12.2702162 9.0559955 10.5276433 12.8057728 11.2426720 8.6189959 7.4972267 -0.9621258 7.9265385 10.8455527 11.397819 6.187542 9.023637 9.002136 7.541621 10.536440 7.656181 8.135827 11.063281 6.412834 1.037804 7.848367 6.332692 11.941112 10.307506 8.297539 9.007901 11.209285 6.799346 12.056609 9.549548 10.363101 10.042016 11.612152 10.959636 10.671699 8.760603 1.037804 9.882760 6.968533 10.683003 5.207721 11.414735 10.142394 7.114611 14.009249 9.883285 10.436539 12.732697 10.815051 10.144358 2.359718 TCGA-D8-A73U 88 0 NA 492 breast stage iia t2 n0 m0 female 2012 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1662460 9.4767245 11.3155181 9.7341448 8.3668397 10.0374227 9.7216826 10.0705592 10.3588145 8.8004314 11.4021514 10.4233413 1.2878860 11.8874295 2.4253787 9.8098815 6.4335654 8.8981751 9.1827062 12.5019647 3.3582837 12.6377226 6.8114505 9.6363422 9.4578134 5.2513631 NA 13.1043834 8.8803454 3.1358796 9.0103547 7.5769854 NA 6.4973425 10.1067902 10.5443331 9.6577040 10.9680722 10.0387629 11.4462457 6.0212421 10.3948440 15.1986062 8.7089604 9.2946352 10.7320751 10.1346326 5.2138877 2.2878860 8.5695868 11.9853774 -1.0341603 10.7312465 6.4578142 8.7440376 7.2043648 10.1662460 11.6960059 10.3588145 12.2762892 12.9798937 8.4578134 10.4527955 10.3114821 11.3013508 11.1016697 5.3058101 11.5795197 10.1087057 -0.0340126 10.6232789 8.5031790 4.6129894 7.1258319 10.2420848 10.2156665 10.0738313 9.5612179 8.2067516 9.7489586 13.0873320 12.1639449 9.9952476 9.4914812 -0.19950000 0.39579000 0.39579000 0.00694350 0.00174280 -0.20796000 0.00652620 0.00555290 0.00555290 -0.10959000 -0.10959000 -0.10959000 -0.07841100 0.00305220 -0.00373950 -0.00373950 -0.00373950 0.00000000 0.00000000 0.00711190 0.00277450 -0.20025000 -0.19725000 -0.19725000 -0.08173800 0.00638710 0.00638710 0.00638710 0.44511000 -0.19950000 -0.19950000 -0.00027724 0.00694350 -0.20796000 -0.20796000 0.00652620 0.00652620 0.00555290 0.00555290 0.00555290 0.01419000 0.01419000 -0.10959000 0.00499690 0.00499690 0.00499690 0.00499690 0.00305220 0.00305220 -0.00373950 -0.00373950 -0.00515830 -0.00515830 0.00000000 0.00000000 0.00000000 0.00180300 0.00277450 -0.20025000 -0.19462000 -0.19725000 -0.08173800 -0.20858000 0.00638710 0.00638710 0.40627000 0.00264730 -0.00705760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.198 -0.198 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.198 -0.198 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 11.0327223 13.3793900 2.9659689 10.5002633 6.2918503 10.5602850 4.7208475 NA 9.0089877 8.1656326 -0.0340126 7.6767667 3.9659597 9.7489586 9.7571233 2.4253787 9.3922251 8.5414997 10.2304030 9.0185285 9.2880464 8.5769854 10.3426285 4.6938828 7.1802792 10.4563100 1.9659505 NA 11.4578135 2.9659689 12.8649396 11.9051723 8.1899619 10.0041935 9.7684768 8.9993833 4.3922281 4.4895237 -0.0340126 1.2878860 8.5788289 10.0639925 10.1277221 3.8728485 8.7869211 7.7141535 9.9581906 5.1157075 9.0666228 -1.0341603 12.2422302 5.1754128 4.7208475 9.2178925 4.8363231 9.1754138 10.5210288 10.5109248 10.8367104 -0.0340126 13.2923899 2.1358960 10.4983163 -1.0341603 8.5358162 5.2513631 7.9288565 9.2103243 11.848752 5.135884 8.118246 11.887429 10.768881 10.438651 12.501965 10.749777 9.123307 10.802011 13.512493 8.558417 8.569587 9.522466 -1.034160 7.150836 11.003164 11.291828 4.358277 8.662928 8.301351 7.209135 10.307051 9.728342 8.255979 11.402151 7.558418 1.773321 4.666399 7.510886 10.160102 11.461066 7.332283 8.730832 11.442200 10.381702 11.975254 9.657704 10.915422 9.593494 11.094599 10.965608 10.718759 8.963140 -1.034160 10.527759 9.847839 10.731246 8.018528 11.596667 10.166246 7.375351 13.461878 9.725016 10.356129 12.826756 10.972286 10.012402 4.095241 TCGA-D8-A73W 79 1 385 244 breast stage iiia t3 n1a mx female 2013 NA yes mucinous carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0044647 9.9285159 11.0027022 10.1743245 8.5345729 9.9663873 9.9675926 9.4586020 11.2643641 12.6565414 11.3765937 10.1617427 1.9116916 12.5686290 6.7247758 10.8646106 5.8398135 8.4317805 11.1779736 12.8506337 -0.2582526 13.6077575 8.4866166 9.0679312 9.8858034 9.7620681 1.0637100 9.4525891 8.3491131 3.8292407 8.2276121 8.1426621 NA 5.4697037 9.8972333 10.4849340 9.1233255 10.9570123 9.1690955 11.5049950 11.8328874 9.5442989 15.2052272 8.2401931 9.5305010 10.7467053 11.3061703 4.1680483 NA 9.1146476 9.7724497 0.7417474 11.0668069 5.7075662 6.3564925 4.6725215 10.2584676 11.1958248 9.9681947 11.4295957 12.6850300 9.2555102 10.6868606 10.8998052 11.0103246 10.6602732 5.1847246 11.1756288 11.6038387 0.3267674 10.6040325 8.5475266 3.8743642 6.2175157 9.7916311 9.9627655 10.6140727 9.8568262 3.3267387 8.7571976 12.1658177 11.8299083 9.6358425 8.4300331 0.32253000 1.25850000 1.26480000 0.00180300 0.00180300 -0.00083160 0.00083195 -0.00083160 -0.70136000 -0.00332430 -0.00332430 -0.00332430 0.01098200 0.01098200 0.00000000 0.00000000 0.00000000 -0.00609740 -0.00609740 -0.00761010 0.00069327 0.01349200 -0.67361000 0.02188400 0.02188400 0.02328600 0.02328600 0.02328600 0.01349200 -0.66910000 -0.68122000 -0.00857660 0.00180300 -0.00083160 -0.00083160 0.00083195 -0.00326500 -0.70208000 -0.70136000 -0.70397000 0.01028500 0.00763920 -0.00332430 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 0.00000000 0.00000000 -0.00609740 -0.00609740 0.01782400 -0.00761010 0.00069327 0.01349200 -0.67683000 -0.67361000 0.02188400 0.00263570 0.02328600 0.02328600 0.01349200 0.00597000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1405261 13.2614189 3.6959827 9.8112324 3.4422269 10.2687709 2.0637100 NA 8.6501754 8.0271850 4.0637100 6.9824780 3.4966669 10.0015259 9.7481086 2.6486725 8.8953347 9.1795347 12.2715792 9.7592870 9.4925901 8.5345729 12.1646358 3.7417798 9.8626685 10.3253356 1.7417905 NA 11.0535310 3.0637100 12.6495183 11.6988846 6.8710662 10.7547563 10.5923601 8.9777968 2.3267387 4.2012104 0.7417474 2.2012261 8.4335262 10.0329534 9.8774920 4.2336350 9.3448618 8.7752056 9.8199335 7.9316074 9.2316306 NA 12.8283335 4.6244285 9.1102891 9.1686659 4.9646250 3.3267387 9.9487969 9.8483455 5.5746737 2.4422269 13.1735414 -1.2580801 10.3379724 NA 9.1426621 5.4142066 7.5587666 9.0455634 13.1355344 4.3564889 8.2175162 12.5686290 10.5730899 10.3491129 12.8506337 12.6853048 9.0700874 10.9229349 13.6123881 9.8626685 9.1146476 8.0905110 -0.2582526 6.5997641 11.7467053 10.9885232 6.0726997 8.3398353 8.5132720 7.8292451 9.1918908 7.2012143 7.4764919 11.3765937 7.5715054 2.7417905 8.5198599 6.7099316 11.9773481 10.4958349 8.1971100 8.7530098 11.6654815 5.2653431 13.0323573 9.1233255 10.7530099 10.2391355 10.4155334 10.4495731 10.6524254 9.3820276 -1.2580801 9.7450897 3.8292407 11.0668069 6.9167083 10.7669222 10.2584676 7.5683309 12.4695967 9.3973133 10.6225140 13.5497915 9.9512360 10.3725048 0.7417474 TCGA-D8-A73X 53 0 NA 767 breast stage iia t2 n0 m0 female 2013 NA yes other specify NA white not hispanic or latino NA NA 3 3 NA NA 1 4 3 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1809066 9.3526283 11.8042741 8.7086263 8.6988866 9.2687036 10.7404277 9.5497312 9.6680191 12.8716593 11.2421249 10.2504834 2.8150220 12.7971595 3.0780633 9.8880919 7.3726770 8.3212300 10.5493924 13.1082633 4.4472882 13.7991907 6.6630186 10.1268198 10.8945063 3.9193592 -1.5067626 12.1473300 8.2227143 2.6630258 8.2176073 7.8329432 -1.5067626 4.4930965 9.6939920 9.8178365 9.8484445 11.8579121 10.0210591 10.8851425 -0.5069676 12.3838327 14.1909841 9.2875579 10.2670568 11.0648461 10.8800337 5.1655181 3.7025467 8.7219123 10.7080197 -1.5067626 10.5116414 4.1369460 6.0244748 5.7025467 10.1499652 12.0959083 11.0142031 12.1461624 12.9728737 9.0038577 10.8599620 10.8022856 11.3044681 10.7983002 4.8150220 11.8651423 11.9540612 -0.5069676 10.2765010 8.6705129 4.4957975 3.9193592 10.7495970 10.4577953 10.1274508 9.3765005 3.6223799 9.1760881 13.9333138 12.7614892 9.9617175 10.1383015 -0.01416900 1.35640000 1.36620000 0.21146000 0.21146000 -0.01931400 0.21868000 -0.02041200 -0.02041200 -0.00636680 -0.00636680 -0.02166800 0.00263570 0.00192430 0.00000000 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01505400 0.00045654 -0.44674000 0.02370600 0.02370600 0.02370600 0.02412700 0.02412700 0.02412700 0.32286000 0.01852300 -0.01416900 -0.00622860 0.21146000 -0.01931400 -0.01931400 0.21868000 0.21868000 -0.02041200 -0.02041200 -0.02041200 -0.01464100 -0.01593100 -0.00636680 0.05138700 0.05138700 0.02146300 0.02146300 0.00192430 0.01237600 0.00000000 0.00000000 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01147300 -0.01505400 0.00045654 -0.44674000 -0.75426000 0.02370600 0.02370600 0.00180300 0.02412700 0.02412700 0.30969000 -0.00505830 -0.42495000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.020 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.020 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.61721472 13.52212179 8.51546134 10.10365696 2.88541818 10.30486955 0.81500152 -1.50676258 8.67300266 7.71709512 0.81500152 7.16551906 1.95251995 10.13830150 9.88379980 4.37573454 8.35882656 9.36961043 10.90989098 10.43414103 9.49543734 7.75518803 10.16596066 2.07806326 10.33072141 9.57524255 3.24798826 NA 10.35727960 4.77849772 12.86473398 12.06401645 7.21419282 10.23960772 8.05914758 9.30205762 4.39998452 2.88541818 0.07806326 3.19353522 9.42087142 10.01223819 10.29641737 3.53748245 7.55513973 5.91935915 10.51129359 5.67300230 9.20217722 NA 10.78800129 3.19353522 4.53748866 9.71573142 5.95055706 3.98494474 9.82288977 7.69031023 6.60683601 0.49313492 13.76812669 1.07806326 9.85339190 -1.50676258 9.16993201 5.38791048 7.95866001 8.67672897 13.05977127 4.60161927 8.72070940 12.79715951 10.46068001 11.02471860 13.10826326 12.06116831 9.09339670 10.33347796 13.02885482 9.32677416 8.72191227 9.28507018 0.07806326 7.95866001 10.97337873 10.9059279 6.9969197 8.8093749 9.1978617 8.0322524 10.6076947 6.2073385 5.7692190 11.2421249 7.4789354 5.1369501 9.4545432 6.4417524 11.6855404 10.2450559 7.6197981 8.8484445 11.4723400 6.0087939 11.8146397 9.8484445 10.5960533 10.0846157 11.3338714 9.5832058 10.4870933 8.5126840 NA 9.6754629 5.7025467 10.5116414 7.7338851 10.6900029 10.1499652 6.9024849 14.0884966 10.0808709 10.4671494 12.7194304 10.9154210 10.3757365 -0.5069676 TCGA-E2-A105 79 0 NA 1308 breast stage iia t2 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 1 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 4.508365e-07 10.1557102 9.6473201 11.8860532 8.7720819 9.8034687 7.9302069 10.5654683 10.8632729 8.4028479 14.0835006 10.7962060 11.1662114 1.1658155 13.2218175 3.7507673 8.8106953 6.2713435 8.7889065 11.0231234 13.4924390 0.3585088 13.9479588 2.2653469 9.4754866 11.8384868 3.6063830 -1.6416037 10.6789725 11.7964661 2.1658155 6.1266384 6.7378328 -1.6416037 2.0589052 9.6977472 9.9149600 9.0229012 10.3770019 10.0162190 10.9516116 12.1880776 11.9264100 13.6636964 8.8162042 10.6222953 9.4191499 11.7281876 4.5872750 6.6667935 8.7868143 10.1233255 -1.6416037 11.1710324 3.8503094 4.6063830 4.1913416 10.3231558 12.6274345 10.2257327 11.9401253 12.9990379 8.2133225 11.0501975 10.8803684 11.0786982 10.2483382 4.0588966 12.3315235 11.1901571 -1.6416037 10.2490983 8.9283096 4.9434150 3.7160032 10.5608839 10.6645156 11.1379681 11.6693507 0.9434338 4.9130426 11.3867054 10.7467404 10.4663249 9.7253226 -0.01108900 -0.00556710 -0.00903040 -0.00833000 -0.00833000 0.00066359 0.00621830 0.00635740 0.00094096 3.65690000 0.00330020 2.98180000 -0.73707000 0.00120660 0.00816610 3.12720000 -0.72021000 0.00427240 -0.00639640 0.00296530 -0.00058553 0.00038626 -0.72846000 0.65678000 1.27180000 -0.01246700 -0.01246700 -0.01246700 1.43660000 -0.01108900 -0.00556710 -0.00293870 -0.00833000 0.00066359 0.00066359 0.00621830 0.00621830 0.00635740 0.00094096 0.00094096 -0.73733000 -0.02975000 -0.73874000 0.00872300 0.00872300 0.00000000 0.00000000 0.00120660 0.00552310 0.00816610 -0.71062000 -0.72562000 -0.72562000 0.00427240 0.00038626 0.00038626 0.00296530 -0.00058553 0.00038626 0.00955850 -0.72846000 0.65678000 0.01234600 -0.01246700 -0.01246700 0.01457900 -0.37157000 -0.42180000 0.000 0.000 -0.712 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 -0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 -0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 0.000 7.75933363 12.11292397 4.80139667 9.61525241 1.86052585 11.45038514 -0.05664124 -1.64160374 8.57519999 7.55567047 -1.64160374 7.19743689 2.16581549 10.54239949 9.38359349 5.75933430 6.31845604 9.54146896 7.62991683 10.33394370 9.74615369 7.97867386 10.01487886 1.35845253 7.00591194 8.78890655 3.64385619 -0.05664124 11.61657829 2.94341503 12.44376043 12.00208473 7.63457802 9.93588283 8.33286857 9.65880647 5.61584295 1.94343378 NA 5.57762218 8.82299967 8.72039784 9.29361901 3.35845253 10.19365176 6.97316352 9.99869887 4.71600865 10.79073490 NA 9.86525740 3.11333378 4.13981326 9.51277838 7.59468365 2.60637116 8.39325272 6.48257566 7.03441052 0.35850879 13.89897557 -1.64160374 11.51311388 NA 8.50056108 4.71600865 8.45780193 8.54827863 15.427644 5.874153 9.424543 13.221818 10.172636 10.295828 13.492439 13.165155 8.278807 10.589375 12.139199 11.518956 8.786814 8.817886 3.265347 8.658807 13.735325 11.183612 6.897613 8.888860 10.085949 9.702195 11.041038 4.002306 10.559659 10.796206 6.639225 -1.641604 6.324238 8.932319 8.897613 10.338594 10.003212 9.938241 9.927360 3.716003 11.362938 9.022901 10.701084 8.160970 11.038594 9.401481 10.365131 8.433933 1.165815 8.085404 3.402845 11.171032 5.358453 11.574594 10.323156 7.130174 14.085258 10.675018 9.397373 12.435353 11.558280 10.017558 1.165815 TCGA-E2-A106 34 0 NA 2541 breast stage ib t1c n1mi m0 female 2006 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 3 2 NA 1 NA NA 1 1 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3401500 9.7648295 11.2565492 9.0085149 9.0807389 9.5348091 10.6059362 9.0913150 9.6439867 14.8476566 9.6169581 10.9728212 0.5348585 13.1346057 3.7442580 9.0075000 3.1786668 8.2160474 11.5081477 13.6485920 -0.4651415 14.0388832 1.5348087 9.2772618 11.2462610 9.7594139 NA 6.5516175 8.6870939 1.5348087 7.9505506 6.1858606 NA 3.7047392 9.7998380 9.1150676 10.8271308 8.9993549 9.4318983 10.7378512 1.9942539 10.3429689 14.1098460 8.3839954 11.3728312 10.7919023 11.3545890 4.1197712 8.0564096 8.8248280 11.2302549 -0.4651415 11.0186249 3.7047392 2.6222744 3.1786668 9.9206716 11.8157248 10.5456869 12.6291343 12.7625754 8.7696266 11.0363976 10.6232993 11.5470845 10.6791487 4.2896943 11.9026334 9.4484465 NA 10.0710563 9.5982042 3.0602550 2.9942358 10.1079830 9.7874746 10.6756389 10.2045799 4.3421636 9.5640963 10.9114772 10.2921991 10.3271928 9.6209454 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.0855564 11.3373255 4.2072369 8.8746590 3.0844725 11.8435747 -0.4651415 NA 8.3881185 6.3740135 NA 6.1197712 0.5348585 10.1305329 9.0435944 1.3421565 5.3161675 9.3153489 7.7466977 11.2921991 9.5235647 7.8657258 10.5575237 0.8567069 10.9500227 9.5474336 3.9271285 -0.4651415 11.2224035 0.8567069 11.6470857 12.4500349 7.6511529 9.7271019 6.4536723 9.2195577 3.6222744 1.7047392 NA 5.9860195 8.6666661 10.3759804 9.4182161 2.8567467 10.6354320 9.1160096 9.6446397 4.6640903 10.0539538 -1.4651415 9.8746591 4.4890034 4.7047337 9.6209917 8.2119121 2.1197878 9.7165825 6.9484373 7.0064843 NA 13.7382718 -0.4651415 11.1094026 NA 8.1235239 6.3292259 8.1840655 8.5585634 12.5786908 5.4174509 8.6433335 13.1346057 10.2045799 10.1037153 13.6485920 14.2052717 8.1550292 10.4067144 13.0200724 10.9873078 8.8248280 9.8328717 -0.4651415 7.6354715 13.1619440 10.6252524 5.9942403 8.4919112 8.1983674 8.3912346 10.5750269 4.3676995 11.1800172 9.6169581 6.2072350 NA 8.8634841 6.1895874 10.4762236 9.6472487 8.0970513 9.8213669 11.5625424 3.1786668 9.7921734 10.8271308 10.2134093 9.9308786 10.7992517 9.0166086 10.2309073 8.9901363 NA 9.1334387 5.0739659 11.0186249 5.4890066 10.1421395 9.9206716 7.4053900 12.5435879 10.5654763 9.5550947 12.3812789 9.3935672 9.4955351 -0.4651415 TCGA-E2-A107 54 0 NA 1047 breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino 6 3 3 3 3 5 1 2 3 3 NA NA 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 8.75068622 9.17042159 11.60962141 7.91876487 8.69653639 9.25793323 10.72076010 9.08342428 10.44643397 9.83247154 11.75358975 10.38783931 3.04692754 13.62861123 1.98801203 8.84289589 8.47184304 7.84600807 10.18360462 12.64214123 4.07548985 13.50085011 6.68383538 10.49281327 10.63608532 5.13098439 -0.59684137 8.69634095 9.87321523 -0.01202434 6.52200552 5.67919012 NA 3.35725640 9.82091736 10.49714259 10.08210499 10.82355147 9.08868967 11.07106342 -0.01202434 10.82801840 14.15502727 7.85553256 10.19178322 11.14579532 10.73426176 4.91085736 8.43786399 7.47720617 11.85556351 -1.59684137 10.85607820 3.89491475 3.82933204 4.23595677 9.71197269 11.52022093 11.13162318 10.48421538 12.24246550 9.28799858 10.39918520 10.10484783 10.89941931 10.48853730 3.57298665 11.15941267 10.10393806 -1.59684137 10.14411037 8.78784870 2.76062548 3.76061484 11.34521278 8.75400391 10.09218920 9.23674564 2.10349764 9.94995930 12.72245473 11.23536154 10.10653585 9.72330138 5.4206e-01 1.0990e+00 1.1336e+00 -7.3545e-05 -1.1861e-02 -7.7482e-03 2.8517e-01 -3.1237e-01 -3.2219e-01 3.2060e-01 3.2060e-01 3.0761e-01 2.9963e-01 2.9963e-01 0.0000e+00 1.2246e+00 -6.0844e-01 5.6418e-01 5.6418e-01 -3.0933e-01 4.7190e-03 1.3492e-02 2.9787e-01 2.9787e-01 2.9787e-01 -1.7116e-02 -1.7116e-02 -1.7116e-02 1.8597e-02 -2.8453e-01 -2.9154e-01 -8.8904e-02 -7.3545e-05 -7.7482e-03 -9.5426e-03 2.8517e-01 2.8517e-01 -3.1237e-01 -3.1237e-01 -3.1096e-01 2.7931e-01 2.7931e-01 3.2060e-01 3.6917e-03 3.6917e-03 6.7426e-03 6.7426e-03 2.9963e-01 2.9963e-01 0.0000e+00 -3.8033e-02 -6.1758e-01 -6.1758e-01 5.6418e-01 5.6418e-01 5.7952e-01 -3.0510e-01 -9.0074e-03 1.3492e-02 -6.0941e-01 2.9787e-01 2.9787e-01 -2.9829e-01 -1.7116e-02 -1.7116e-02 2.2585e-02 -6.0322e-01 -6.1230e-01 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 -0.285 1.134 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 0.000 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 -0.285 1.134 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 0.000 7.27958180 11.93298337 4.21042004 9.54005595 2.98743002 11.14537431 2.21042004 -0.59684137 9.31370751 6.89090506 -0.01202434 6.85567706 3.44746018 10.18319444 9.65691229 4.07548985 6.51158980 9.19178322 7.94222359 10.81722152 9.27920569 6.29788288 10.20558117 2.21042004 9.48388247 9.35580608 2.92662572 -0.01202434 11.18974291 1.86251090 11.53620709 11.98626519 7.15795218 9.23199465 6.96911940 9.78676917 5.54261713 1.21038886 -1.59684137 9.37388981 9.63428596 10.12288143 10.97386932 5.41429116 8.08498851 8.48521387 10.99107671 5.96530638 9.66574699 -1.59684137 11.34978843 0.40304953 3.35725640 9.82927717 6.41194140 -0.01202434 9.48986461 7.17785203 8.11387133 -0.01202434 13.63439855 -1.59684137 10.24816276 NA 5.41429116 5.99552296 7.30393140 9.04872335 14.438167 6.345579 8.619811 13.628611 9.454274 11.594587 12.642141 10.284561 7.949959 10.394587 12.941375 9.622838 7.477206 8.647429 2.988030 7.357261 12.285899 11.42508585 8.13946694 8.50766344 10.15878702 9.85941924 11.07367686 6.12416475 8.01961352 11.75358975 6.66045235 2.30996195 4.91085736 8.54296142 8.88587296 10.71225701 8.80714204 9.65868367 9.83508466 3.95765463 10.73496706 10.08210499 10.86658920 10.47150726 10.76253992 10.20153671 10.79699157 7.36884952 -0.01202434 8.90651304 3.04692754 10.85607820 3.92662572 9.98755764 9.71197269 6.68846713 12.77232140 10.00947007 9.67336014 12.71303852 10.92907499 9.34411256 0.72499944 TCGA-E2-A108 64 0 NA 837 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 8 2 2 4 2 4 3 4 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 4.508365e-07 10.2837351 9.6970195 11.4014440 9.5787831 8.2213329 9.4517677 9.5623699 10.0768606 10.6006486 12.2150467 10.3800634 10.5059845 1.5982223 11.4486455 3.7450759 10.7617054 5.0576669 8.8062954 8.8756888 11.2676266 -1.2092280 12.0417710 6.4419316 9.4469925 10.4633058 7.9482276 3.9608082 13.3181674 10.4593223 4.3758457 8.5933967 8.1173101 -1.2092280 5.7097428 9.6819046 10.0687490 9.4999642 10.4450689 9.3154222 11.0852140 1.9608082 9.4703605 15.1370305 7.6434096 9.2462076 11.0866494 10.7461671 4.4347350 2.5982461 9.3889330 11.8132483 -0.2090612 10.9288322 6.7566644 8.0576669 6.2584869 10.3046080 11.4663965 10.2092602 12.0813313 12.4061652 7.7936956 10.7584670 10.3144424 10.9742057 11.1705296 5.0946626 12.0526815 10.2508243 0.7908554 10.7720909 9.5272823 3.0327180 6.8187867 10.5373948 9.9707895 9.8974434 10.3926512 5.4202365 8.9456984 13.4815878 13.0859319 9.9701676 9.4913202 0.0563080 0.0563080 0.1536700 0.0282000 0.0778620 -0.0675920 -0.0422450 -0.0862530 -0.0862530 -0.1283100 -0.1283100 0.6522200 0.1849500 -0.0841690 0.0200630 0.0200630 0.0200630 -0.0165410 -0.0165410 -0.0718730 -0.1165200 0.0119580 -0.0704020 -0.0704020 -0.0704020 -0.0077482 -0.0077482 -0.0077482 0.0873900 -0.0161670 0.0563080 0.0068044 0.0282000 -0.0675920 -0.0675920 -0.0422450 -0.0422450 -0.0862530 -0.0862530 -0.0862530 0.1586100 -0.0698220 -0.1221300 -0.0068323 -0.0068323 -0.0068323 0.1203500 -0.0841690 -0.1199100 0.0200630 0.0200630 0.0200630 0.0200630 -0.0165410 0.0640820 0.0640820 0.0246890 -0.1165200 0.0119580 0.0000000 -0.0704020 -0.0704020 -0.0781260 -0.0077482 -0.0077482 0.0873900 -0.0208240 0.0255310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 0.000 10.4821878 12.8678630 6.6673969 10.2513364 4.8319937 10.2176694 4.8994028 2.5982461 8.3164015 9.8311701 NA 9.2466905 6.5457676 10.3645277 9.1778206 4.2827363 10.6554535 9.2431216 10.1632015 9.3767820 9.0080748 7.0100491 12.3248185 4.2503098 7.5153939 10.2239443 5.4633053 NA 11.1481575 3.2503098 13.1811166 12.4168176 8.6811446 10.1206768 9.2055658 9.2150468 7.9098217 4.0762854 0.7908554 1.9608082 8.4256913 9.2482613 9.2023915 7.0052001 8.0267032 7.3105164 9.8359575 5.7450759 9.2686386 -0.2090612 11.5486871 4.6237732 4.8132476 9.3281570 5.8249638 7.2045085 10.5119796 10.3777203 8.8380044 -0.2090612 13.6218907 2.5982461 10.4101834 -1.2092280 8.0808991 6.5119803 7.6237703 9.0832022 11.770663 5.697771 8.648862 11.448645 10.261031 10.460651 11.267627 11.251336 9.213996 10.606664 13.408520 11.347626 9.388933 9.241061 -1.209228 7.572240 11.035542 11.342348 5.867696 8.856970 8.807689 7.793696 10.287040 8.637938 8.286736 10.380063 7.703770 4.813248 5.038809 7.549936 11.731561 11.300161 8.208733 7.840729 11.062927 8.634802 11.618225 9.499964 10.637938 9.859659 10.839367 10.991166 10.906249 9.164833 3.648857 9.414149 8.577150 10.928832 7.727518 11.076283 10.304608 7.170259 13.844934 10.117310 10.819132 12.742074 10.231231 9.705266 3.960808 TCGA-E2-A109 64 0 NA 1417 breast stage iia t2 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 1 3 5 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.560588e-06 4.161568e-07 9.3552749 9.7425772 11.9905593 9.0353800 10.0149159 9.4267296 10.6735356 9.4972726 9.0688548 15.3914549 11.1178540 10.6786943 0.3006509 13.4069880 3.0555601 8.3313375 5.0688556 8.3828194 8.8818711 13.5853139 -0.1143475 13.4709477 1.6226024 9.4057539 11.8381316 7.5462231 2.0011177 8.6876108 11.4971189 0.6225556 9.0311407 6.0688556 -1.6994662 5.0820298 9.8422512 9.7379024 11.1880815 9.2929007 9.4712216 11.1414484 -0.1143475 10.0157745 14.6916287 8.1637261 10.8598085 12.0003514 10.8437023 5.3230385 7.9889210 8.8417672 10.7557408 -1.6994662 10.8131641 7.4427777 5.4504162 4.1335635 9.4510524 12.2601291 9.7753904 11.1808280 12.6613804 7.3505193 10.5860726 10.0183554 10.8683889 10.9803705 5.0820298 11.4152262 9.5662855 -0.6992320 10.1714205 9.1779547 2.3051826 5.5767942 11.1174541 10.1268216 11.5290382 9.6343849 2.1080226 9.0045741 11.6054496 10.5677497 10.1027829 9.4222040 -0.279180 1.458900 0.984110 0.120050 0.120050 0.127560 0.062223 -0.023977 -0.717340 3.656900 1.251500 2.724600 0.067518 0.067518 -0.310140 2.495600 -0.328320 0.814740 0.106670 -0.081073 1.121400 -0.157070 -0.486070 0.334800 -0.395530 -0.335030 -0.319370 -0.322400 0.860170 -0.317620 -0.279180 -0.602840 0.120050 0.108560 0.123580 0.062223 -0.039188 -0.141970 -0.717340 -0.597080 -0.093799 -0.328090 0.557430 -0.714700 -0.696760 -0.309680 -0.295230 0.067518 0.067518 0.303780 -0.310140 -0.317510 -0.317510 0.106670 0.099579 0.099579 -0.703700 0.318190 -0.160010 -0.296620 2.476300 0.322050 -0.396190 -0.335030 -0.322400 1.170500 -0.150030 -0.158170 0.000 0.000 -0.310 -0.310 0.107 0.107 0.000 0.318 -0.157 0.000 0.000 0.335 0.335 -0.670 -0.670 -0.322 -0.322 0.121 0.400 0.000 0.000 -0.150 -0.158 0.112 0.112 0.120 0.120 0.109 0.109 0.000 0.000 -0.618 -0.618 0.000 0.000 0.358 0.000 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.310 -0.310 0.107 0.107 0.000 0.318 -0.157 0.000 0.000 0.335 0.335 -0.670 -0.670 -0.322 -0.322 0.121 0.400 0.000 0.000 -0.150 -0.158 0.112 0.112 0.120 0.120 0.109 0.109 0.000 0.000 -0.618 -0.618 0.000 0.000 0.358 0.000 -0.310 -0.310 0.000 0.000 8.2299287 12.5985898 6.2722136 9.4485114 3.6153692 11.3606908 1.7600932 8.5462231 8.9391064 6.6669923 NA 7.0382891 2.6929851 10.6732635 9.2779504 5.9300276 7.6248510 8.8780994 8.3894588 11.9382010 9.8648533 7.3146911 10.6571224 -0.6992320 10.1092326 10.0568097 2.7600932 -0.6992320 12.9973664 0.8856525 12.2345455 12.1246347 7.5556988 9.1924541 9.4421390 9.3954080 4.8242332 2.8242383 -0.6992320 6.9588821 8.0421376 8.9588818 10.2380443 2.6226024 8.2759308 8.1288068 10.3874701 5.3118990 11.8318082 -0.6992320 9.6620661 5.5767942 4.5485969 9.6673697 5.6976182 6.6180830 8.2822378 9.0063028 8.0011103 -1.6994662 13.6592530 -0.6992320 12.0290162 NA 9.1524195 6.1015702 8.3491574 8.3104992 14.9454565 5.2893550 8.7015498 13.4069880 10.1168541 10.4091949 13.5853139 12.1187533 8.6304666 10.6903018 13.0369667 11.6282231 8.8417672 9.3041884 0.3006509 6.7559971 11.4322059 11.012122 7.198516 8.226967 10.366423 9.581441 10.247763 6.062221 11.379655 11.117854 7.292193 -0.699232 4.490493 8.423938 10.683835 10.235467 9.992414 10.039185 9.368777 5.987171 12.105532 11.188082 10.699414 9.835460 11.071334 9.788511 10.327885 8.945428 -0.699232 8.987644 7.565113 10.813164 7.560414 10.676253 9.451052 7.277950 13.166162 10.345065 9.747754 11.887158 10.385811 9.500343 2.388134 TCGA-E2-A10A 41 0 NA 1229 breast stage iib t3 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 5 2 NA 3 1 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 11.12221954 10.11361521 11.18906744 9.85570758 8.32798685 9.18306191 9.69112112 9.76641892 8.76855951 12.95496641 10.95725545 10.38385838 2.83031618 12.49063644 4.22886486 9.62650338 4.50016468 8.41937161 10.88362517 13.58338110 3.83031618 14.97301811 1.83033646 9.84029249 10.92211235 5.34816513 NA 10.05957214 10.76454330 0.69278426 6.64700936 7.25352795 -0.04409209 3.45834263 10.21244908 10.54612237 10.92930546 10.16204761 10.17823970 11.70613547 NA 10.31046396 14.47669095 10.29095100 11.56717949 12.06448057 11.37756145 4.43697466 6.91004304 9.39394598 11.92343375 -0.04409209 11.29755135 7.16530097 5.86273901 5.91004424 10.57117033 11.74116346 10.32979993 12.73884542 13.09123588 8.50016787 11.10897699 11.07196373 11.06371817 10.55947355 4.58033847 12.10124873 11.85696554 -1.62905459 10.22146230 9.02283328 2.84791675 5.28974964 11.39619733 11.32762388 10.47318854 9.67637655 0.69278426 8.09710298 12.06578669 11.28489603 9.95020068 10.16692428 0.0047686 1.5560000 -0.8420000 -0.0034133 -0.0034133 -0.0077795 0.0483120 0.0018526 -0.0048761 0.4048300 1.5656000 0.0014364 0.0092203 0.0092203 0.0217940 0.0217940 0.8855300 -0.8319200 -0.0035349 -0.0006435 0.0139610 0.8610300 0.0180130 0.0180130 0.0180130 0.0164750 0.0164750 0.0164750 0.0309230 -0.8266500 0.0047686 -0.0086653 -0.0034133 0.0187130 -0.0077795 0.0000000 0.0000000 0.0018526 -0.0048761 -0.0048761 0.0026853 0.0026853 -0.8464100 0.0129840 -0.7657500 -0.8402300 0.0230550 0.0092203 0.0408010 0.0217940 0.0217940 -0.8319900 -0.8455100 -0.8319200 0.0177340 0.0779140 -0.0006435 -0.8343500 0.8454900 -0.8449700 0.0309230 0.0180130 0.0154970 0.0164750 0.0164750 0.0309230 0.0046297 -0.8647800 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.945 0.945 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.945 0.945 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 0.000 8.1734013 13.0790526 8.2195079 9.2672172 3.6188142 10.5257028 1.5408208 NA 8.3722931 7.3192521 NA 7.3566985 0.9558335 10.7882098 9.1157187 0.9558335 4.9100418 9.6922492 9.2830256 9.3082585 9.3222932 7.8384905 10.6623432 2.6928066 9.6740946 9.1123517 -0.6290546 -1.6290546 10.4771204 3.2777765 11.4161324 11.3276239 7.4098033 10.4332682 9.8251840 9.0237297 3.5803385 1.9558335 -1.6290546 7.3821121 8.4689168 8.9539674 10.3250810 0.9558335 5.3706595 6.2596284 10.5650260 4.7284376 9.7776212 -0.6290546 10.6475907 2.5408208 5.7107348 9.5392810 6.6226039 4.3016242 9.4173266 7.2867638 7.0643720 -1.6290546 13.3713689 -1.6290546 10.0516838 NA 7.5078755 3.4583426 8.1055943 9.0084152 14.598436 6.085129 8.553279 12.490636 10.544874 9.522536 13.583381 14.131890 10.058260 10.261149 13.810359 9.726236 9.393946 7.241249 3.797148 7.191064 11.998305 10.9182613 7.7459244 9.1423741 9.2140206 9.4787557 10.4311179 5.8303162 8.9340809 10.9572554 6.1782406 NA 6.1910632 7.2541386 11.6370856 9.6098864 8.3424281 8.6723808 12.7232041 4.8627390 11.7689857 10.9293055 9.7300853 9.9726555 11.6683742 9.5193612 10.5997034 8.7823958 -0.6290546 8.8844642 4.4369747 11.2975513 7.3538781 10.6065998 10.5711703 7.3224023 13.1742838 9.6092894 9.3694752 13.1019385 10.0477234 10.0025165 0.6927843 TCGA-E2-A10B 67 0 NA 1141 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 5 5 3 3 3 1 1 1 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.774378e-07 10.5058652 10.5407247 11.9769256 9.6697872 7.9496878 8.6813308 10.3164023 9.9702920 9.5363094 15.0735650 9.3060649 10.9461555 3.4344014 12.3222648 2.8869208 9.3463466 6.0993646 7.9889919 9.1744499 13.4255890 2.0933573 14.3080695 6.6376870 9.5389106 10.0038587 6.8375270 0.1865006 11.1528996 11.3194569 1.1865006 8.6873172 7.3080086 NA 4.4532608 10.1109166 11.2984260 10.8433470 11.2542458 10.2288187 11.6876905 3.6459091 10.5977215 14.5701965 8.2121826 9.7563215 11.8775645 11.3054164 4.4152922 3.6783311 9.3183322 12.2610349 NA 9.8549171 5.4993580 5.8659559 4.6942673 10.4029180 11.5416887 10.6218851 11.8117275 12.6062380 8.7236937 11.3659179 11.0037808 11.1987507 11.0894157 5.4344014 11.6111665 10.5343734 -1.8134994 10.1533412 8.4485702 4.2754243 5.3362227 10.7995741 9.8764734 9.9853521 9.4885429 9.0436789 8.5407248 12.4816703 11.5854861 10.4080624 9.4361814 -0.0299200 0.9543800 1.0062000 0.1567400 0.1695200 -0.0193460 0.8140600 -0.0379200 -0.0180360 -0.0263660 -0.0263660 -0.0263660 -0.0366230 -0.0282800 -0.0318310 -0.0544720 -0.0544720 0.8306900 0.8306900 -0.0206120 -0.0304660 -0.0467800 -0.0523820 -0.0523820 -0.0523820 0.4030300 0.4030300 0.4030300 0.9347800 -0.0299200 -0.0299200 0.0061847 0.1567400 -0.0193460 -0.0042176 0.8140600 0.8140600 -0.0443900 -0.0180360 -0.0174540 0.2438100 0.2461500 -0.0263660 0.5430400 0.5430400 0.5430400 0.5430400 -0.0282800 -0.0282800 -0.0318310 -0.0544720 -0.0281540 -0.0402990 0.8306900 0.8279800 0.7874700 -0.0176230 -0.0304660 -0.0411840 -0.0431210 -0.0523820 -0.0523820 0.4494400 0.4030300 0.4030300 0.9347800 0.7473800 -0.0669830 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 0.207 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 0.207 8.6376863 12.7644351 8.0288255 10.0956184 2.7714419 10.4509179 1.1865006 -0.8134994 8.3538936 7.6962505 0.7714631 7.3690188 2.5787938 9.8637545 9.1001127 1.1865006 9.0645261 9.3688696 8.4833914 9.3183322 9.5509328 8.2646260 10.2366641 2.5787938 9.4999252 9.6942699 1.7714208 -0.8134994 10.3083325 1.5084287 12.0609764 11.8475853 7.2976106 9.7304737 9.9194907 9.3400274 5.3763008 2.5084033 -1.8134994 8.0413438 9.0444564 9.5798658 10.1698252 4.1172130 7.1837396 6.4344030 10.1504551 7.3688696 9.4828180 NA 11.9600267 3.6127417 4.7563295 9.5526883 6.3859021 3.0444641 9.9270994 8.4092704 4.9938283 -0.8134994 13.6797366 -1.8134994 10.4254770 NA 8.3922685 5.4152956 7.7352974 8.2989149 11.0429009 6.0066548 7.9986525 12.3222648 10.1034743 10.8823561 13.4255890 12.2694559 8.7582279 11.6624620 13.1330161 9.6438562 9.3183322 9.3093033 0.7714631 6.8694705 12.0756941 11.5802679 8.7975001 8.8158319 9.6606882 8.7227225 11.6071580 6.6418032 8.6095914 9.3060649 6.5830798 2.3563974 7.3861479 7.5471027 10.9861617 10.4128875 7.4764943 8.3183322 13.3800392 5.4056453 10.8356888 10.8433470 10.8162872 9.4620180 11.5862873 10.2953264 11.1415803 9.2219616 2.9938374 9.4966563 5.1053386 9.8549171 7.7139521 10.3939107 10.4029180 7.3790638 12.9532630 10.3971467 10.2434517 13.0616487 10.3397106 9.8921077 0.7714631 TCGA-E2-A10C 54 0 NA 1220 breast stage iib t2 n1a m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 6 3 5 1 2 4 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 8.600573e-06 3.086496e-06 9.75557996 8.41607716 10.74402087 6.84709995 9.13769076 9.98216322 9.52256192 9.92682775 9.56486189 13.03086922 10.00705531 10.07544225 2.38766583 12.87001857 2.38766583 9.05752040 4.05751959 8.37118072 9.78076678 12.68874937 4.70959944 12.96595586 4.62867446 9.61210918 10.67894436 7.28138390 -0.07172444 10.42990537 11.31248145 1.92823766 7.61823498 5.89402224 NA 3.78621996 9.12053002 10.28908436 9.17260127 9.41507244 9.43305625 11.20145014 3.25015817 9.64076425 13.88869185 7.79214476 9.86781648 10.50472168 10.46108025 5.17616317 -1.07187607 6.94504580 9.72184069 NA 10.38561816 4.76112567 6.89402103 4.45179796 9.44196499 12.05961202 9.60066263 10.35973496 12.66928291 7.20900782 9.97944620 9.41908819 10.23714518 9.96578428 2.09815002 10.87258339 8.02099438 NA 10.58376803 8.91692204 4.01570273 4.90551938 10.70302437 9.27364246 9.82229724 9.98148451 1.25017333 9.11806195 12.66685741 10.86192800 10.25522855 9.87441261 -0.234350 0.438680 0.438680 -0.237040 -0.237040 -0.049965 -0.035176 0.602800 0.124470 0.825100 0.825100 0.825100 0.099724 3.656900 -0.205350 -0.205350 -0.073343 0.462460 3.656900 -0.239120 0.451900 -0.153240 0.122840 0.122840 0.122840 0.017963 0.140130 0.140130 0.188740 -0.234350 -0.234350 0.117560 -0.237040 -0.049965 -0.049965 -0.035176 -0.212800 -0.244360 0.059372 0.124470 0.458540 0.451560 -0.252730 0.000000 0.000000 0.000000 0.000000 -0.242410 -0.242410 -0.233350 -0.205350 -0.073343 0.866320 0.447050 -0.248370 -0.248370 -0.239120 0.451900 -0.232140 -0.243500 -0.129230 0.122840 -0.229690 0.017963 0.140130 0.188740 -0.227970 -0.155150 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 0.124 0.124 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 0.000 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 0.124 0.124 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 0.000 8.98893316 11.73418269 1.92823766 9.43404895 3.01144197 10.97399699 3.51320016 NA 9.03152505 5.33762904 NA 6.37944768 1.25017333 11.06938653 9.15223895 4.13769205 8.03676156 8.89978076 8.64933666 11.99415827 9.14250789 7.15223920 10.13464130 2.09815002 8.63559661 9.68729327 1.92823766 1.51318752 11.17646141 -0.07172444 13.14566497 12.03888374 6.29456010 9.82002096 10.03021302 10.10128974 8.37738581 2.25017333 1.51318752 7.25915383 8.69807502 11.10285100 10.41758357 3.01569381 9.68487711 10.27751861 9.91336771 4.45179796 9.09440051 NA 10.62780981 2.25017333 3.45180456 10.19943188 5.99991434 5.97263063 9.10814648 8.74841628 7.49429159 3.32055688 14.17516345 -1.07187607 10.34819756 NA 8.48090650 4.76112567 8.98351981 8.61123178 10.988981 6.482826 9.552119 12.870019 10.067789 10.962004 12.688749 10.816219 8.210353 10.035454 12.783787 7.656158 6.945046 8.142556 2.928238 7.539262 11.118062 11.0671490 6.1856248 8.7145069 8.8426225 8.5539460 10.4613772 7.6112321 8.7939706 10.0070553 5.7355926 -1.0718761 5.2320198 7.2171493 11.3948236 10.6667519 7.2945592 9.0918870 6.5720938 5.8471000 11.9910947 9.1726013 11.2948328 10.1684324 10.7583563 9.0639467 10.3732522 6.9169220 0.9281997 9.6728609 6.7420183 10.3856182 9.0716206 10.6256394 9.4419650 6.7862187 13.5412210 10.0361082 10.4305719 12.1770544 11.0507418 9.5047217 2.3876658 TCGA-E2-A10E 64 0 NA 865 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 5 5 3 3 3 5 1 2 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.040392e-07 9.67988787 9.97613920 11.24021992 9.56289492 8.63683593 8.79167377 10.08247747 9.75606255 10.17410151 13.47978691 11.80562523 10.53575875 -0.08988138 13.09544163 4.49501074 8.88923685 6.45951359 8.37357427 10.34849525 13.98134470 1.32509854 14.45037983 7.51243945 9.87092073 10.86787747 7.77010223 0.32504096 10.67961231 9.93841651 2.49500435 7.63569998 6.27345435 -0.67484388 2.71740773 10.19197995 10.99927974 10.99817561 12.33867182 10.25804033 11.77526771 4.20772890 11.04469014 14.56891225 9.71837601 9.64701548 12.09203039 11.78234004 4.75135124 5.66493788 8.85256446 12.84944551 -1.67484388 11.60455295 6.44402925 5.91004904 4.41255122 10.79065387 12.01147855 10.58218057 12.28599441 13.12046763 8.43099607 10.65684420 10.23255656 11.82131707 10.47197429 5.13244112 11.80638235 10.91777805 NA 10.25138347 9.04104937 3.91064633 5.14526578 11.30093541 10.25693304 9.93288013 9.68976932 1.49502994 9.86569987 13.87342773 10.91824512 10.38341745 8.90157169 -0.71957000 0.67178000 0.67178000 0.00000000 0.00000000 -0.00691950 0.09260500 0.00877190 -0.00904190 0.00077952 0.00077952 0.00077952 0.00707470 0.01265500 0.00921530 0.72546000 1.97760000 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.02202400 0.01488800 0.01488800 0.01488800 -0.00434930 0.01754400 -0.00816240 0.07887100 -0.71957000 -0.71957000 -0.00622860 0.00000000 -0.00691950 -0.00691950 0.04287400 0.04287400 0.00190060 -0.00904190 0.01474900 -0.00346270 -0.00346270 0.01558700 0.01614600 0.01614600 0.01614600 0.01614600 0.01265500 0.01265500 0.01992300 0.00921530 -0.73073000 -0.73073000 -0.00013862 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.02202400 -0.75116000 0.01488800 0.01488800 -0.74680000 -0.00434930 -0.00816240 0.07887100 0.01447000 0.04131700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.720 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.720 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3137723 13.1824853 7.1292181 9.9498829 2.8252565 10.8363460 1.6470381 0.9100418 8.5670704 8.0185746 1.6470381 8.2587780 3.4125512 10.5262925 9.1635035 2.6470151 7.6957746 9.2785563 12.8141200 10.0551330 9.5690469 7.9062881 10.5415302 1.9100418 7.7429399 10.0803924 2.7845249 NA 10.1512387 1.7845040 11.9189454 11.4014020 7.5173804 10.5554082 9.6957748 9.2145914 5.9100490 0.3250410 -0.6748439 2.3250985 8.9644281 8.9680418 10.9430140 4.5730170 8.9806360 7.2617254 10.4764212 5.5539072 9.9347279 NA 11.3125291 3.4543733 4.2792856 9.7638534 5.2547603 3.9100514 9.2214199 7.0631793 8.1324421 -1.6748439 13.8330988 -0.6748439 9.9370343 -0.6748439 7.6197079 4.2319776 7.8525645 9.3037979 14.062019 5.832882 8.312352 13.095442 10.078254 11.036754 13.981345 12.408401 10.641182 10.685111 13.834429 9.590702 8.852564 9.077468 -1.674844 7.228970 11.707711 11.232542 8.555108 8.477372 8.587182 9.011588 10.533675 6.025527 7.246929 11.805625 6.428375 2.325099 7.103165 7.266810 10.314127 10.040191 8.512439 7.676027 12.399313 5.628867 12.520519 10.998176 10.058526 9.809910 11.983857 9.108086 10.521382 8.593044 NA 8.824166 4.832880 11.604553 6.713105 10.687305 10.790654 6.976139 12.844601 9.469746 9.822440 13.353857 10.386796 9.590702 1.495030 TCGA-E2-A10F 47 0 NA 878 breast stage iia t2 n0 (i-) m0 female 2008 412 yes infiltrating lobular carcinoma 0 white not hispanic or latino 5 2 2 3 NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.080784e-07 10.6119290 10.0865030 11.9550002 9.9389384 8.3720166 9.7221413 10.0148599 9.8059130 9.4263470 7.9862095 11.0607269 10.6272521 1.8610422 12.5983019 3.4933271 9.6587160 6.9228306 8.2653445 8.8222149 12.9219530 2.2395813 13.6568507 5.2805926 9.2955828 11.0229422 7.2150835 -1.4607667 10.6580675 9.1602625 2.4460180 8.0249557 7.9421385 -0.4609653 4.0309805 9.9114474 10.4965913 9.7631280 11.4236785 9.4025384 11.2181666 2.7870563 10.8132133 14.8996135 9.3430718 9.7697293 10.9823290 10.9432036 5.1684816 3.7090480 9.2940139 11.5998223 -0.4609653 11.5016610 8.6619544 7.1684826 5.9903377 10.6888735 12.0322313 10.6299004 12.8552665 12.9451985 8.4460171 11.0857798 10.7317121 11.7861638 11.0785276 4.8966787 12.1329843 12.0518669 -1.4607667 10.5632272 9.1269040 3.6278636 6.4933223 10.6450349 9.8988760 10.2721417 9.8417653 4.4460180 9.8175759 13.5946631 12.0550726 10.2998463 9.7027761 -0.05361100 0.72873000 0.72943000 -0.00346270 0.00000000 -0.06477700 0.01363200 -0.05792400 -0.45147000 0.02314500 0.02314500 0.02314500 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01530800 0.01153900 0.01153900 0.00722170 0.01782400 -0.04224500 0.02791900 0.02791900 0.02791900 0.01363200 0.01363200 0.01363200 0.02763800 -0.05361100 -0.05361100 -0.00013862 0.00000000 -0.06477700 -0.06477700 0.01363200 0.01363200 -0.05792400 -0.45147000 -0.45147000 -0.06558100 -0.06558100 0.02314500 0.01712400 0.01712400 0.01712400 0.02651400 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01530800 0.01028500 0.01153900 0.01153900 0.01153900 0.00722170 -0.42996000 -0.42407000 -0.43116000 -0.42549000 0.02791900 -0.04915400 0.01363200 0.01363200 0.02763800 -0.08107300 -0.40584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7828954 13.7094818 10.1919714 10.3237613 0.5747313 10.5984709 0.1240634 NA 8.3609002 8.4669044 2.7870563 7.8496484 4.0937123 10.3428539 9.2026846 1.7090700 9.2291243 9.1529158 10.0274687 9.9233706 9.5369621 8.0744016 11.2102251 3.0626916 8.4110317 9.6456894 5.0148596 NA 10.6072329 3.9314467 12.7717722 12.0307290 8.7027760 9.8216358 9.5020224 9.1982304 4.6476484 2.7870563 1.1240634 7.2906704 8.6876031 9.2238750 9.2533719 5.3464818 8.8915562 6.5221201 9.6554704 6.1315833 9.6450349 0.8610819 10.9714073 4.0309805 4.5164060 9.7350890 6.3890006 3.4933271 9.8348953 8.9010702 5.8337478 NA 13.7698224 NA 10.1630079 -1.4607667 8.9737548 4.4933207 7.5475547 9.1269040 13.490092 5.738798 8.338408 12.598302 10.468755 10.979736 12.921953 12.284591 9.597118 10.996764 13.490502 11.117735 9.294014 10.286061 0.539134 7.215083 10.950108 11.3761629 7.2636401 8.9985580 8.9893068 8.7314192 10.3152468 7.6212753 5.1538378 11.0607269 7.9862095 4.8789754 5.9228306 7.1520313 11.9134867 10.3589063 9.4278697 8.2395661 12.2214627 5.4460180 11.3252755 9.7631280 10.6172772 9.7289509 10.4998524 10.0168847 10.6860133 9.6496097 0.8610819 9.5629153 4.6888741 11.5016610 8.0802233 10.5618479 10.6888735 7.5916944 13.9351625 10.1203269 10.3802976 13.1564791 10.6626012 9.6977361 1.8610422 TCGA-E2-A14N 37 0 NA 1434 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 2 5 NA NA 2 5 2 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 4.508365e-07 8.8218846 8.5670868 11.0686873 8.4938911 9.2938204 9.5439621 7.7322841 10.7722627 11.4429456 12.3128195 10.9907014 10.9005241 0.4224483 10.2037883 1.4224483 10.3407949 7.8486930 9.0913135 9.7078309 7.0223412 NA 11.9585139 7.8763849 9.3629868 11.1170766 5.5517129 2.2968979 8.6576450 10.7178149 -0.1624604 7.2297831 7.7770455 NA 0.4224483 8.5344336 10.7858333 9.4299230 9.5923535 9.0420372 10.3717689 2.7443549 8.2233284 13.8514865 7.7917496 9.6048228 10.7989158 10.9979678 5.0469188 NA 9.5636842 11.8081113 NA 8.4429456 6.7858330 6.3293192 5.4521770 8.3253059 12.3872507 10.7375781 10.9910181 13.2147444 5.8598329 10.7428531 10.1817620 11.3712825 10.3358166 3.5923494 13.3158565 6.1320874 -1.1626218 10.5487029 10.5090071 2.6448254 6.8763856 8.7682035 10.1222902 10.1789848 10.3422851 0.4224483 5.0853949 13.7545584 13.1603801 10.0229610 9.0936748 0.09191600 0.11638000 0.25652000 -0.09828600 0.38419000 0.24958000 -0.12148000 -0.04747400 -0.02685100 0.22592000 0.22592000 0.54524000 0.43243000 -0.13355000 0.09696100 0.09696100 0.09696100 0.28945000 -0.06659600 -0.10802000 0.00000000 -0.04414400 -0.04048000 -0.04048000 -0.09176800 0.12182000 0.12182000 -0.09512000 0.02862200 -0.12707000 0.09191600 -0.10828000 -0.09775900 -0.17284000 -0.11103000 -0.12148000 -0.12148000 0.14890000 -0.02685100 -0.02685100 0.26891000 -0.19287000 -0.30062000 0.56881000 0.22453000 0.22453000 -0.08598800 -0.10828000 0.25840000 0.09696100 0.09696100 0.06871600 -0.30956000 0.28945000 -0.06659600 -0.06659600 -0.11747000 0.00000000 -0.10147000 -0.09214200 -0.04048000 -0.04048000 -0.09247800 0.12182000 -0.09512000 -0.09406400 0.10424000 0.00013863 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 0.000 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 0.000 7.7473592 11.0933798 4.0469188 7.2804098 3.0701317 11.0895401 1.1593708 2.0073749 9.3766249 6.4447963 4.6188260 8.1182138 5.2968979 11.8922399 9.5864974 1.4224483 7.9667488 9.9196151 6.3212823 8.9328632 8.8321872 6.6056499 10.1700621 -0.1624604 9.2999683 9.7981921 2.0073749 NA 9.7902074 5.5517129 14.0974667 12.1267645 5.8261519 9.9209454 12.4686431 10.6588415 2.2968979 1.4224483 0.8374589 -1.1626218 8.6892153 7.6703560 7.4186664 5.9035541 8.0210766 5.7682029 10.3268124 4.1950168 9.7360675 5.2804107 12.0421900 3.0073929 5.8486930 10.8949129 7.6170538 5.1593951 7.7858330 6.9354986 3.9667535 0.8374589 13.9214439 NA 10.1383906 NA 10.6143103 1.8374589 8.2595310 6.9302228 10.518704 9.690776 9.305072 10.203788 9.937471 11.746609 7.022341 8.675094 9.382208 11.036218 13.550047 13.216980 9.563684 8.934181 4.695448 8.059053 11.099267 10.444796 4.392056 9.347241 8.866753 7.195018 9.386548 5.837466 4.644820 10.990701 11.432490 NA 6.132087 8.965925 12.312693 10.197765 8.237833 8.625369 8.092494 6.452175 11.726432 9.429923 10.644821 10.349219 10.732284 9.770419 10.185641 8.787293 NA 9.474480 5.803250 8.442946 8.742853 10.627407 8.325306 8.129788 14.847229 10.536605 11.448030 12.577036 11.351194 9.094854 3.085391 TCGA-E2-A14O 76 0 NA 1359 breast stage iiia t3 n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 1 1 NA 3 2 1 1 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 9.4088806 9.2752848 10.9597000 6.7577753 10.2961300 7.7816227 9.0051409 9.4753760 8.9061676 13.7474278 11.7973041 10.5166159 3.0028825 12.8002256 2.1403860 8.8794053 6.2882903 7.7577760 9.3648320 13.4055273 1.4883093 14.3719403 3.5878450 10.5607310 11.5274300 6.2583889 2.2659169 8.4071785 11.0324516 -1.3190456 6.0560004 6.7088659 NA 1.4883093 8.9371690 10.6682242 9.6351565 10.4483171 8.9229432 10.1264924 0.2659169 11.1927129 13.9870931 7.3783105 8.5938494 11.0407097 10.3826998 2.6809544 0.6809544 8.3066692 11.4352214 NA 11.7316591 3.6351507 4.2659244 4.6351565 9.5225245 11.9302218 10.8265740 11.6386064 12.1480562 8.9277006 10.2701431 9.4182075 10.4122793 9.8211509 2.6809544 11.8094379 10.2341094 -1.3190456 10.3445183 9.0754230 1.1638207 3.3813941 10.5810722 9.5311471 10.0646645 9.3604402 -1.3190456 8.8521368 13.2126462 10.3770583 10.1597298 9.1249396 -0.404950 0.935080 0.935080 0.332700 0.318350 -0.434200 0.457340 -0.057958 -0.054420 0.836080 0.836080 0.836080 0.219450 0.219450 0.515940 3.656900 -0.437450 0.692600 0.677590 -0.445230 0.062365 -0.446090 0.492510 0.492510 0.492510 -0.229200 -0.229200 -0.229200 0.493380 -0.420250 -0.404950 -0.417940 0.332700 -0.434200 -0.434200 0.457340 0.457340 -0.066399 -0.054420 -0.056173 0.036653 0.036653 0.836080 -0.460390 -0.448720 -0.448720 -0.449100 0.219450 0.219450 0.515940 -0.476810 -0.454150 -0.454150 0.692600 0.677590 0.677590 -0.445230 0.062365 -0.446090 -0.452330 -0.476170 0.492510 -0.435180 -0.229200 -0.229200 0.502660 0.402440 -0.467700 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.449 -0.449 0.000 0.000 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.449 -0.449 0.000 0.000 7.4122794 12.5460168 3.9663659 9.3075818 2.2659169 10.6109583 0.2659169 NA 8.9938430 7.3952059 NA 5.7577753 5.9938442 10.1768152 9.3674606 1.6809544 7.1607407 8.6116977 9.5366074 12.0949847 8.3898718 5.7999007 9.3030119 0.2659169 9.3753182 9.5225245 4.8508844 0.2659169 10.9709790 1.6809544 13.1391104 12.5404950 6.5138507 9.8964932 8.5090968 9.7185072 1.2659169 1.2659169 2.3813941 7.5998236 10.0157921 11.1231261 9.5303654 1.2659169 9.6442320 8.3391717 10.1444845 5.1072234 9.8515112 NA 10.5330995 1.4883093 2.1403860 10.1415850 6.3091507 2.3813941 8.3969220 7.0296881 7.4947412 2.1403860 14.7182497 -1.3190456 10.1986296 0.6809544 7.1847861 3.7684278 8.1009204 9.2365079 15.211731 5.725354 8.402060 12.800226 9.781622 11.446661 13.405527 10.884002 8.529317 10.725696 13.100723 8.972131 8.306669 9.968095 -1.319046 7.878177 11.036036 9.9007337 8.0429042 8.1627594 9.5459201 9.0829064 9.2003705 5.0028870 3.0732718 11.7973041 7.8508850 2.3813941 2.9288819 6.7618849 8.4834764 9.4491445 9.7342073 10.3696476 9.3604402 3.8102477 11.7295952 9.6351565 10.8278470 10.2878280 11.0540972 8.6087383 10.0945881 6.8855317 2.5878450 8.3672155 3.0028825 11.7316591 5.6116977 9.5319284 9.5225245 6.4491437 13.2029286 10.4097310 9.8319767 12.7953532 9.9652059 8.2451096 0.2659169 TCGA-E2-A14P 79 0 NA 1246 breast stage iiic t2 n3 m0 female 2008 NA yes infiltrating ductal carcinoma 10 white not hispanic or latino 6 3 1 NA 1 6 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.664627e-06 7.629541e-07 10.1206733 9.4145138 12.1410278 8.3940498 8.3837077 9.3380156 10.1463905 11.7325420 10.5023750 16.0151422 10.7190659 11.8892575 2.9277258 17.4550153 4.2647691 9.9407237 7.0548441 8.3819768 6.9744249 13.0853446 NA 12.2830828 5.7458934 10.1321741 10.7354255 7.2382251 2.5866927 9.3027712 11.5778386 -1.3201259 9.9283247 9.1786534 0.2647166 4.2945105 9.8696287 10.5342830 9.9471761 10.0067954 10.2713266 10.5605357 12.4459189 10.4975873 15.0106160 7.1872818 9.7771779 12.1825117 10.3064258 4.0721230 3.3802446 11.3116633 11.9868626 NA 11.3553202 4.5126946 5.2189632 5.3663047 10.1170360 11.9337994 9.3845725 11.2018953 13.0280482 6.2343921 10.7589556 10.0876827 11.3389082 11.2748285 5.3802446 12.1744098 9.1524950 NA 10.3384620 7.9675168 4.1064070 4.5866927 11.1410278 10.2141071 9.4782760 8.0891952 1.8497191 9.2092348 12.5891348 11.5037685 9.8403059 11.0271487 -0.44221000 0.47821000 0.73910000 -0.01835300 2.11450000 1.21010000 1.30600000 -0.02630400 2.36600000 0.39828000 1.20250000 0.43733000 -0.04319500 -0.01133500 -0.00041585 1.32210000 -0.02862800 0.40577000 0.00069327 0.40040000 1.33690000 -0.02876500 0.91460000 3.65690000 3.65690000 -0.09881400 -0.08080700 -0.10145000 3.65690000 0.76389000 0.36543000 0.39131000 -0.00484610 -0.52440000 -0.01285100 -0.00221680 -0.00221680 -0.02630400 0.00332990 0.43598000 0.35202000 -0.04170200 -0.52123000 -0.02671400 -0.92503000 -0.46812000 -0.08027500 -0.01133500 -0.04414400 -0.08067400 0.79743000 -0.04102400 -0.02849100 0.40577000 0.00000000 -0.06061400 -0.00498440 0.43631000 0.37693000 0.38788000 -0.05980700 0.29135000 -0.01711600 -0.10539000 -0.10145000 0.36117000 1.55810000 -0.05576900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.391 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.426 0.426 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 0.250 0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.391 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.426 0.426 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 0.250 0.250 8.6325456 11.7572875 3.4346949 8.1102567 5.8546291 11.8180760 3.6340007 2.7672734 9.5859431 7.1392362 0.2647166 6.9605754 3.0721230 11.1193754 8.7485823 1.6797841 9.0285324 8.7725614 11.1994404 11.1286948 8.4898295 7.0461265 10.4153602 1.4871776 7.9182091 9.7632836 3.4871647 -1.3201259 11.4469541 1.0017302 12.8879623 12.6245162 6.4212704 9.1846232 7.1310153 9.9074201 5.6340007 2.0017302 0.2647166 6.6105421 9.0140774 9.8751765 10.6513477 4.7241973 6.9684859 6.8696284 10.0812171 6.1955031 9.1494461 NA 11.1060689 1.8497191 2.1392403 9.9278206 8.4155124 6.6398066 8.0373564 7.7672668 9.4421863 2.9277258 13.3994069 -0.3201259 12.1063310 NA 10.6459491 3.6340007 7.2033666 7.3974804 13.6863889 7.8794767 9.7974472 17.4550153 9.8403059 11.3787259 13.0853446 10.3064258 8.9500995 10.9029008 12.5911962 9.6046166 11.3116633 8.7377959 0.6797841 9.8358873 12.7270985 12.294399 5.394051 7.764613 9.396624 9.745893 10.906322 6.622318 9.346028 10.719066 4.001730 NA 8.364553 9.626491 12.188094 12.164249 7.376771 10.201895 8.217023 7.636906 10.270934 9.947176 10.456237 10.522155 11.717351 10.007357 9.876406 8.975573 6.309162 9.403866 8.149446 11.355320 4.072123 10.736103 10.117036 6.719052 14.294083 11.578783 10.629631 11.366086 11.438027 9.336229 2.767273 TCGA-E2-A14Q 50 0 NA 1163 breast stage iia t2 n1mi m0 female 2008 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 2 NA 3 1 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 9.971995547 9.532274096 11.242875296 9.104897482 9.018901461 9.082108315 10.456604837 9.758080604 10.358990683 13.703276485 10.563617481 10.564882372 1.868212636 12.306455727 3.052659337 9.244849726 7.779486930 8.135017653 10.495930656 12.822361143 -0.006216965 13.956386758 6.129899122 9.726777074 10.607244397 6.001257302 -0.006216965 10.516343389 9.888074402 1.578745536 7.447718038 7.732980059 1.216175457 4.081228830 9.745305915 9.363722585 9.915602761 11.050173732 9.667365278 11.054232574 3.801117258 11.539048132 14.503227577 8.305464887 10.012425648 10.901153281 10.556004281 5.023508201 6.397484685 9.100542766 12.939510457 NA 10.109672537 6.136720485 5.254287906 4.339536494 10.394285509 11.926960697 10.650484640 12.443340390 12.939815194 8.214543037 10.668542614 10.175116989 11.203215169 11.197925393 4.315689396 12.294019051 11.212728608 -1.591179465 10.382855380 8.935298555 4.023805353 5.868229925 10.716569390 10.220976686 10.081224702 9.715430617 5.637618940 9.159506329 12.828627873 12.310326202 10.004989090 9.846031274 -0.58117000 0.59116000 0.59116000 0.01447000 0.02094900 -0.59107000 0.01458400 0.00013863 0.00013863 0.00944910 0.00944910 0.01042400 -0.00290910 -0.00290910 0.00471900 0.00471900 0.00471900 -0.57200000 -0.00027724 -0.06276400 0.02062300 -0.00733390 -0.57704000 -0.57704000 -0.00304750 -0.02644100 -0.02644100 2.90240000 0.00000000 -0.01285100 -0.58117000 -0.01285100 0.01569000 0.00583090 -0.58569000 0.01458400 0.01237600 0.00013863 0.00013863 0.00013863 -0.00069303 0.00652620 0.00944910 -0.00318590 -0.00318590 -0.00318590 -0.00318590 -0.00290910 -0.00290910 0.00471900 0.00471900 0.00168500 0.00168500 -0.57200000 -0.01092200 -0.01092200 -0.05725000 0.54930000 0.00041593 -0.58902000 -0.57704000 -0.57704000 -0.43572000 -0.02644100 -0.02862800 0.00000000 0.01140000 -0.59334000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.330640410 12.294019051 5.940180848 9.215349041 3.618250404 10.987172046 1.408820535 2.109226816 8.401737542 7.847591092 NA 7.975614711 1.730748629 10.711152691 9.507489422 2.730726895 8.553457658 9.123903340 11.107504016 10.964107404 9.781343319 9.329896326 10.255464972 -1.591179465 9.238522013 9.748092696 6.222580475 NA 10.427347313 3.163691937 12.928681252 12.323651565 7.618252607 10.046782698 8.054457803 10.325051977 4.315689396 -0.006216965 -1.591179465 3.963390889 8.342489855 9.999854032 10.525792977 4.538084922 8.276680434 6.578724406 9.628572944 5.095299961 9.791423397 -1.591179465 11.155523592 1.408820535 5.136720485 10.037627528 7.332097434 3.496257806 9.514707743 7.687248994 7.143508727 -0.006216965 14.055442408 -0.006216965 10.164104173 NA 6.753095043 6.351313836 7.986228311 8.635211683 13.387747 5.067010 7.882505 12.306456 10.410911 10.926961 12.822361 12.396774 9.415834 10.127760 13.322390 10.360448 9.100543 9.645411 NA 7.514708 11.480262 10.853555416 6.222580475 8.698818203 9.172841505 7.666187069 10.497146979 5.940180848 8.683759957 10.563617481 5.216156051 2.578721387 6.761946091 6.164019924 11.006851862 10.303617066 8.544508570 9.284548603 11.465944935 4.900654312 10.719599562 9.915602761 10.523517753 10.165355626 11.461367353 9.372418038 10.716284802 9.171181302 NA 9.539511491 6.357166648 10.109672537 6.095299961 10.682303522 10.394285509 7.228978340 13.536914514 10.958343401 10.751151867 12.185746336 10.796008937 9.439466477 -0.006216965 TCGA-E2-A14R 62 0 NA 1174 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.809058e-06 4.855162e-07 9.550251 8.406557 11.002525 8.103994 9.071163 7.609885 9.029994 10.858169 11.871826 13.694257 11.174956 10.186924 4.656536 12.165914 2.334597 9.829372 8.252386 8.254554 10.862795 5.197103 NA 7.471366 9.429764 9.598094 11.000912 5.519032 2.575627 12.250641 11.337422 NA 8.032522 5.745541 NA 6.701724 9.099177 10.444557 8.830825 9.747081 10.606495 10.273385 3.267491 12.159421 14.884632 6.750895 9.334607 10.133742 10.027460 2.875171 NA 9.217250 10.170371 NA 10.127250 4.897545 6.695355 4.962637 8.106397 11.996547 9.889894 10.963301 12.323292 5.250215 11.040711 10.854601 11.283771 10.338700 2.575627 11.967933 9.629228 NA 9.853171 8.839517 2.845109 4.004456 11.771319 10.975838 10.895461 10.327417 -0.124849 7.708066 11.645840 10.725362 8.970573 9.835178 1.333900 1.677200 0.821960 1.963800 0.997380 0.492680 -0.696220 0.000000 2.936500 -0.029175 -0.029175 3.253200 0.897880 -0.027945 -0.572990 -0.531950 1.209200 1.918200 -0.047395 1.239600 -0.564250 -0.526140 -0.488380 -0.484700 0.507410 0.936300 0.936300 -0.102760 0.154870 0.147120 1.333900 -0.557770 -0.535810 -1.203900 -1.141100 -0.656400 -0.656400 -0.579600 0.322050 0.481650 0.560630 -0.543400 1.895200 -0.030204 0.949970 -0.588140 -0.865590 -0.555670 -0.555670 -0.535710 -0.531950 0.059080 0.948540 -0.570810 -0.030267 -0.555120 0.470840 -0.564650 -0.587660 0.717350 -0.488380 -0.484700 -1.070100 -0.280010 -0.102760 -0.625670 0.526250 2.411600 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 -0.411 0.000 -0.507 0.000 0.936 0.374 0.746 0.746 -0.451 0.143 0.588 -0.540 -0.558 -0.558 -0.578 -0.578 -0.651 -0.651 0.000 0.000 0.000 0.000 0.564 0.396 0.000 0.309 -0.553 -0.553 0.000 0.000 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 -0.411 0.000 -0.507 0.000 0.936 0.374 0.746 0.746 -0.451 0.143 0.588 -0.540 -0.558 -0.558 -0.578 -0.578 -0.651 -0.651 0.000 0.000 0.000 0.000 0.564 0.396 0.000 0.309 -0.553 -0.553 0.000 0.000 8.4601380 13.0736974 -0.1248490 8.1466384 3.7346446 10.1840834 -0.1248490 6.0943438 9.5127061 8.2866867 -1.1246917 6.4450314 1.8751903 10.0108849 10.1372704 2.5756270 7.9599840 9.5422871 8.2194716 10.4746236 7.6337320 7.1183493 10.8556722 0.4601659 9.1349189 9.9222996 2.9626416 NA 10.7382003 1.1971105 14.1471857 12.7308228 6.5118001 10.1937184 11.3343511 10.3232919 2.7820730 2.3345969 -0.1248490 8.1489712 9.4478759 9.6985429 10.9164925 8.9915196 9.2122846 7.9493172 10.6275562 5.8409592 10.2664191 3.1971105 12.8900679 1.6825284 3.3987334 10.4299083 7.4184008 7.4182077 8.9797744 7.9439541 10.8427621 7.3948116 13.7603477 0.4601659 11.1763860 -1.1246917 9.4825059 5.4750881 8.2631927 8.4917245 9.0932424 9.2513011 9.1846520 12.1659145 11.1135804 11.3040592 5.1971026 10.2829744 9.5136115 11.3178600 13.4881017 10.8563861 9.2172503 8.9652879 0.4601659 8.4825059 11.3712804 9.440278 5.840959 9.248041 8.641705 4.575615 9.048141 6.589420 4.962637 11.174956 10.699737 -1.124692 7.981084 10.400481 10.839877 10.423034 7.843843 9.754759 7.165194 8.328446 10.196179 8.830825 9.782066 9.950655 11.574097 10.367530 10.250215 8.146638 NA 9.180417 9.024923 10.127250 4.267491 10.782885 8.106397 8.074848 15.442181 11.188626 11.372029 12.629750 10.818789 8.500884 3.460140 TCGA-E2-A14S 65 0 NA 1009 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 3 5 1 1 4 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 10.5643499 10.4187445 11.7157758 8.6043342 8.5299092 8.7715700 10.4118534 9.3805976 8.8494104 13.0588902 11.9185271 10.3152751 1.6351043 12.6812605 3.4006199 10.1707557 6.3630116 8.8610218 11.3002497 13.4544722 3.4424526 14.4225247 6.0136029 9.1531545 11.3014930 7.2731652 NA 10.2893695 9.3068095 1.1205510 7.5846266 7.4603682 -1.6868703 4.2200513 9.3011379 10.1128497 9.7888968 11.2455627 9.8667927 10.9644394 -1.6868703 11.9506939 14.6708356 8.7259027 10.1613951 10.6146595 11.2117648 3.8367220 NA 8.4730348 11.9891204 0.8980922 10.6737362 7.1711448 6.7684900 4.5226145 10.8313247 12.2141245 10.9608466 10.8015056 12.5934267 8.1043262 10.6654827 10.3229919 11.1927466 11.0724274 4.1460523 11.8358675 12.3865518 -1.6868703 10.1444706 10.2234314 5.8501493 6.1333416 9.6020294 10.1193101 9.9493347 11.0640797 3.2200513 7.5079199 12.2045674 10.9065545 10.1781233 8.9633175 0.0000000 -0.0078588 -0.0073339 0.0038854 -0.0254140 0.6627500 0.7432800 -0.0106460 -0.8269200 -0.8225200 2.2442000 3.3284000 0.0101460 0.0101460 -0.0012473 2.8950000 2.1817000 0.0188030 -0.0111210 -0.0262290 0.0126550 0.0319990 0.0475520 0.0475520 0.0475520 0.0692390 0.0692390 0.0692390 3.6569000 0.0000000 0.0000000 -0.0128510 0.0038854 0.7150900 0.6421300 0.7178300 0.7178300 -0.0106460 -0.8269200 -0.0253460 -0.0152330 0.0026454 -0.8619800 -0.0081185 -0.0081185 -0.0081185 0.0476940 0.0101460 0.0181030 -0.0012473 -0.0012473 -0.8191700 0.7756000 0.0188030 -0.0111210 0.0225850 -0.0262290 0.0126550 0.0282730 -0.7902300 -0.7781000 0.0475520 0.0061090 0.0692390 0.0692390 0.0181030 0.0146090 0.8341200 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 0.106 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 0.106 8.3018483 10.9482012 6.9996641 9.7746428 2.5527213 10.3219421 1.4831063 -1.6868703 8.5286963 6.3187886 NA 6.1887589 1.3131878 10.3657314 9.1889127 3.9570231 6.8209576 9.0282675 7.3953122 9.9660083 9.6898313 7.8030113 10.5045310 4.3355333 8.7797496 10.0346898 2.4830805 -0.6868703 10.3427957 4.4830870 12.3062786 12.4757907 7.3410695 10.7238797 8.4730348 9.3899789 0.8980922 1.3131878 -0.1019078 5.6882027 8.4705104 10.2886531 10.3011379 3.5226208 6.0905168 7.0747141 9.5610909 5.9425192 9.5299092 -1.6868703 10.6865723 0.8980922 4.4424459 9.9577452 5.1764824 4.4830870 9.1835280 8.0049070 5.8050164 NA 14.1254409 -0.6868703 10.0308398 NA 7.8792175 5.6260477 8.0376771 8.9713748 14.789758 5.379254 9.098616 12.681261 10.175413 10.478384 13.454472 12.962532 10.352723 10.042359 12.242977 10.896011 8.473035 9.052944 2.013605 7.276059 11.972379 10.694706 7.726791 8.656349 9.076376 9.155514 10.059787 6.898126 4.852324 11.918527 5.999664 NA 6.621502 7.742821 8.500515 10.518040 10.132544 9.397972 11.552016 5.589287 12.358284 9.788897 10.531121 10.296513 11.896716 9.204947 10.491206 7.790922 -1.686870 8.173288 4.522614 10.673736 4.635093 11.074650 10.831325 7.041084 14.225023 10.522617 9.860540 11.800878 10.095752 10.174250 2.220051 TCGA-E2-A14T 52 0 NA 2311 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 2 2 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.5978752 10.2438581 12.1996309 9.4630549 9.6545172 9.0761173 10.6170040 10.4663893 9.2187047 14.9190176 10.9687263 11.0664452 3.3321064 13.2328462 3.6772376 9.4247160 5.3800367 8.5405008 10.0091071 13.0868538 2.3705828 14.4547199 0.1226065 9.6043066 11.9681384 8.9736164 0.9300182 7.8908327 9.2337841 2.7665104 6.5572768 6.1505536 NA 3.0768498 9.0377808 10.0742974 9.5754044 8.8300074 9.2147448 11.4261438 -0.8772610 10.7190711 14.6746419 8.8317838 11.5815676 10.9642127 11.4387885 3.8775381 5.8368936 8.4998590 10.1762349 -0.8772610 10.5476019 4.6925053 5.1779297 5.7151054 9.6925039 11.8518442 10.2704892 11.3044218 12.6599881 8.1296756 11.1357966 10.7153483 10.6134992 11.1818238 4.7808612 12.1203571 11.3573161 -0.8772610 10.3873842 8.5593599 5.7662162 4.2723965 10.5208576 10.5031095 9.8390392 9.7941894 2.3705828 7.2311732 10.7741486 9.9495940 10.7181390 9.5681805 -0.3950800 0.5176900 0.5176900 0.2367400 -0.1695500 -0.0102320 0.6106300 0.0000000 0.4626300 0.2632600 -0.2567300 0.9878300 -0.4148200 -0.4148200 -0.0171160 -0.0171160 -0.0171160 0.0130740 1.7641000 0.3614000 -0.0076101 0.6226000 -0.4181600 0.4252100 1.7056000 -0.0015243 0.0077783 0.0052715 0.4031100 0.0172640 -0.4246200 0.0061090 0.2217800 -0.0102320 -0.0102320 0.5063700 0.3951800 0.0000000 -0.4152700 -0.4237500 0.4230100 0.4230100 -0.8557500 -0.4390800 -0.4073800 0.0134920 0.0134920 -0.4148200 -0.4148200 -0.0171160 -0.0171160 -0.0183530 -0.0183530 0.0076649 -0.2809600 -0.2809600 -0.4586400 -0.4139500 -0.0228810 0.1887400 -0.4219000 0.4252100 0.3204400 0.0150280 0.0077783 0.4031100 0.4474800 -0.3697400 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.425 0.000 0.000 0.000 0.371 0.789 0.335 0.335 0.000 0.000 0.000 0.518 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.506 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.425 0.000 0.000 0.000 0.371 0.789 0.335 0.335 0.000 0.000 0.000 0.518 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.506 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 0.000 7.7262747 11.7031425 5.7151054 8.6569514 3.8505694 10.1522807 1.7076131 -0.2924752 8.6848910 6.5983816 -0.8772610 6.4845925 2.2101083 10.6941641 8.9340231 2.6462087 7.8708412 8.8003680 5.2311712 9.9060558 10.1114183 7.3823914 10.3640357 1.1226727 9.1752164 9.5192531 3.1670367 3.1226562 12.4326931 3.3321064 12.6348950 12.2379359 6.4355319 10.7071412 7.0768445 9.2717604 6.5779756 2.5149554 NA 7.8403247 8.3906054 10.0238924 9.9763477 5.1113318 10.5742459 6.5447126 10.0003160 3.7950708 10.7481289 NA 9.2107741 0.9300182 3.2519311 10.1315427 7.2069518 4.3894360 9.3711690 8.7862066 6.2622001 NA 13.3974633 -0.8772610 11.4851402 NA 8.6991327 4.1670448 7.9852858 8.0666285 14.433777 6.700078 9.321093 13.232846 10.640524 10.744013 13.086854 14.997414 8.838610 10.322627 12.582976 11.166701 8.499859 8.423001 1.582074 8.268580 11.783981 11.0276592 7.5882147 8.5031094 8.5851507 9.4982309 10.7226936 3.9555360 9.6398256 10.9687263 7.2363902 NA 5.3025567 8.0434774 9.5368051 9.6579238 8.5468146 9.9134041 9.8582044 3.8775381 11.5340866 9.5754044 10.2853544 10.1155867 11.1192984 8.9064652 10.6479244 9.6417931 -0.8772610 9.6341638 5.6145008 10.5476019 5.5489144 11.2910071 9.6925039 7.0022311 13.2254853 10.5389181 9.9219300 12.5517281 9.8492923 9.6383483 -0.2924752 TCGA-E2-A14U 74 0 NA 1318 breast stage i t1c n0 m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 10.0820309 9.0552361 11.6700320 8.7442533 8.5102815 9.1751920 11.3520998 9.3773331 11.0330926 13.6061337 11.2812459 10.5786141 4.2721875 13.8098730 2.9618455 10.2568331 6.9618444 8.9744134 9.9992270 12.3639189 4.7273814 13.2070172 7.3320088 9.9766151 10.8823763 5.0728775 NA 8.0425026 8.7484411 3.0184205 8.4369297 7.0149567 -0.6820014 2.7774302 9.9418701 9.2135638 9.7557407 11.4724903 9.9455226 11.2177232 9.1720777 12.2771755 14.5893969 7.5884943 10.1786876 11.3790222 10.7244594 5.8802300 3.2721875 8.3472759 12.1120998 -0.6820014 10.5286600 4.2952675 4.4879108 4.1253453 9.6650562 11.6249047 10.5821379 13.0787605 12.6205561 8.5298768 10.6856763 10.6953619 10.8921090 10.9441539 4.7937242 11.2502034 11.2966990 2.2248738 10.3070283 9.1373693 4.7993827 3.9618455 10.9753070 9.9034207 10.4584989 9.3452034 4.9029515 9.9708335 13.7172665 13.2062562 10.1245383 10.2260058 0.00527490 0.00527490 0.00527490 -0.00166290 -0.01050800 -0.00124730 -0.00041585 0.00221930 0.00221930 -0.16268000 0.22503000 0.23349000 -0.00595220 -0.00595220 -0.00857660 -0.00857660 -0.00857660 0.00041593 0.00041593 -0.00138580 0.00736090 -0.01174900 0.00805670 0.00805670 0.00805670 0.00471900 0.00471900 0.00471900 -0.00360110 0.00527490 0.00527490 0.00000000 -0.00166290 -0.00124730 -0.00124730 -0.00041585 -0.00041585 0.00221930 0.00221930 0.00221930 -0.00249380 -0.00249380 -0.16268000 0.00180300 0.00180300 0.00180300 0.00694350 -0.00595220 -0.00595220 -0.00857660 -0.00857660 -0.00857660 -0.00857660 0.00041593 0.00041593 0.00041593 -0.00138580 0.00736090 -0.01174900 -0.16001000 0.00805670 0.00805670 0.00360760 0.00471900 0.00471900 -0.00360110 -0.00136980 -0.01312700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 0.000 7.8058283 11.7198015 7.3867670 10.2450258 2.6846617 11.0227569 2.4879236 1.7774092 9.0467595 7.7505308 -0.6820014 6.5941126 2.9029418 9.5389715 9.7845750 1.9029611 8.0911280 9.0870000 10.7617092 11.2710938 9.5716233 7.6331384 11.2568331 2.1253535 10.5139760 10.9062348 9.5824312 NA 10.3817207 5.8098414 12.9113797 11.9503023 7.0009836 10.2124274 6.2952694 9.5010036 5.3179878 1.1253205 -1.6822329 2.5659139 9.8108433 10.2290060 9.9658967 5.2487246 9.2796916 7.4291247 10.5489097 5.1381673 9.7763952 NA 12.0381260 3.2248738 4.1508764 9.7668999 6.2765413 2.1253535 8.3705566 7.3009821 6.6080079 -1.6822329 13.9955706 -1.6822329 10.8595693 NA 8.4562604 4.7273814 7.6376610 8.7987789 12.165272 4.045906 8.670032 13.809873 10.283412 10.012346 12.363919 12.622269 9.081085 10.336884 13.278760 11.968255 8.347276 8.233868 2.018421 8.037377 11.194122 11.1107789 7.6511443 8.9455226 9.4690052 7.0594559 10.7993768 6.0390879 8.3486556 11.2812459 5.6578372 0.6398804 9.5617576 5.8236424 11.6418878 10.2844940 8.1650462 9.4891654 11.0465469 3.4879108 11.3912867 9.7557407 10.5990493 10.2830514 11.5112060 9.9400405 10.4463052 8.4715407 NA 9.7614191 5.8018053 10.5286600 4.7103050 11.3719145 9.6650562 6.9509839 14.3745628 10.0836891 10.3807094 12.6062779 10.9493930 9.9979085 0.6398804 TCGA-E2-A14V 53 0 NA 1042 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 6 3 1 NA 2 5 1 2 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 4.508365e-07 10.0332550 10.1625251 11.2202732 9.3487246 7.9027236 9.1487671 9.6089602 10.1407861 10.1191420 14.4008997 11.5562447 10.7712187 1.9838601 16.2042575 4.1537891 9.4555356 5.7739383 9.4170981 8.9361161 12.9607824 2.4863540 13.3416872 3.9534888 9.5041516 11.0915133 5.9611394 0.3988976 9.9042131 11.1137872 2.0993289 7.5100338 7.5562447 -1.6012119 3.0427494 10.0373338 10.9847992 9.7788177 11.1845546 9.2584325 11.2836407 5.4649884 9.7646734 14.6129133 8.0345613 8.9678041 11.2690699 11.3729538 4.0713251 4.8251649 8.8766560 11.4833740 -1.6012119 11.2367228 4.4212637 4.8907531 4.2815425 10.3458041 12.2884968 9.8705729 11.9207436 12.6422206 8.5461027 11.0490520 10.3801083 11.1073351 10.6909318 4.9380552 12.1648054 11.4989030 -0.6009930 10.2337638 9.3325884 3.1009945 3.2062525 11.0407238 10.3693632 9.7314938 10.0468059 0.9838965 9.3882922 12.2587237 12.9372686 9.8114677 8.8675218 -0.343540 -0.227970 0.784120 -0.348470 0.105410 -0.057385 0.035383 0.021884 3.656900 -0.370080 -0.401410 0.354630 1.335000 0.024969 0.298830 3.108500 0.016985 0.063223 0.461780 0.044259 0.842180 -0.126810 -0.365440 3.656900 3.656900 -0.038850 -0.038850 -0.038850 1.028300 -0.343540 -0.343540 -0.089302 -0.348470 -0.057385 -0.082535 0.035383 0.035383 0.011400 -0.060614 -0.356460 0.382210 0.242640 0.364770 -0.013953 -0.013953 -0.013953 -0.013953 0.028622 0.028622 0.298830 -0.423960 -0.362380 -0.362380 0.063223 0.104240 0.104240 -0.308740 -0.278100 -0.126810 -0.373240 -0.395080 -0.388840 -0.478180 -0.038850 -0.038850 0.701200 0.013632 -0.226500 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.332 0.000 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 0.132 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.332 0.000 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 0.132 7.8726035 13.1314362 8.1437317 9.2246517 2.8602875 11.2226631 0.9838965 1.3988976 8.8262107 7.1062572 NA 8.9132075 3.9224643 10.2834499 9.1777962 5.3530939 7.3177608 10.2884017 9.2959870 9.9749097 9.1146882 7.7117805 10.0695541 0.1301401 7.6633403 9.8051028 2.2062681 0.3988976 11.6020929 3.4863668 12.4755464 12.3029679 7.2967428 10.5719503 6.8335264 9.5812921 8.1900607 1.5688104 NA 8.1769749 8.3747456 8.1079818 10.6512675 3.0993457 8.5170733 7.0209499 10.0468059 6.8418411 9.1369901 -1.6012119 10.5480098 2.2062681 4.0136052 9.7919075 6.6359169 2.4863540 8.9791565 6.1268180 4.5281837 -1.6012119 13.9432586 0.9838965 10.3872275 0.3988976 6.9573180 2.8583391 8.4240373 6.9838601 13.977452 7.358900 8.492976 16.204258 9.934231 11.046131 12.960782 12.015562 9.119142 11.100854 12.559872 11.206655 8.876656 9.807758 2.486354 11.513291 12.529951 11.061344 6.311786 8.981980 8.668024 9.447385 10.477479 4.568823 4.013605 11.556245 5.206252 2.922464 5.914598 8.769498 11.079697 10.169975 6.922460 9.276182 10.469690 4.665683 10.857484 9.778818 9.958275 9.857304 10.695527 9.472370 10.769313 9.448746 -0.600993 8.509590 4.180259 11.236723 6.812525 10.426113 10.345804 7.379038 13.621089 10.017742 10.108412 12.295230 11.142470 9.226240 -1.601212 TCGA-E2-A14W 78 0 NA 974 breast stage iia t2 n0 m0 male 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 3 5 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.855162e-07 10.12530265 9.92867337 11.52798645 6.85145922 10.49555437 8.95676963 10.24292078 9.88693662 8.99113745 13.19470435 10.82655151 10.33570923 -0.06145073 12.90795592 3.33088820 9.20886471 4.55328062 8.68340311 7.05231155 13.40260456 3.33088820 14.00293326 6.32227430 9.60123780 11.33784732 5.06785380 0.93854927 7.28729775 11.29557151 3.74592570 6.91584951 5.63900926 NA 0.93854927 8.56062134 10.28619075 9.65966862 10.03000481 9.20652650 10.61011046 3.10849100 11.50557479 13.11450874 6.15802795 10.21003240 9.78013372 11.00969652 3.84545994 6.25145211 8.13332617 10.21411193 1.26050748 11.28175510 4.82121018 3.46213087 4.06785380 9.74511899 11.83168129 10.69804150 11.63640575 12.51941681 9.26162413 11.22049943 10.56336485 11.07235378 10.60523726 2.26050748 12.36706042 11.24605483 2.10849100 10.12839394 8.97474296 2.06949595 2.10849100 10.52447080 10.03066576 11.57632632 10.40617492 -1.06130019 8.58422782 11.38306671 10.30489156 9.81891813 8.98705619 -0.00026500 -0.00026500 -0.10892000 0.03807700 0.01601800 -0.02464900 0.06724400 -0.00012639 -0.06768800 0.03751200 0.03751200 0.11051000 0.04827400 0.03018200 0.02203600 0.04941000 0.04941000 -0.00497220 2.19800000 0.02203600 -0.00732170 0.69374000 -0.64235000 0.65536000 1.29870000 -0.00541230 0.08422200 0.03807700 0.06968200 0.11595000 -0.00026500 0.06767400 -0.65444000 0.05766600 -0.00657110 -0.00711800 -0.00711800 -0.68687000 -0.00012639 0.59495000 0.36057000 -0.36951000 -0.65640000 -0.67688000 -0.67472000 -0.67472000 -0.65173000 0.03018200 -0.63877000 0.02203600 0.04941000 0.04941000 -0.64009000 -0.00497220 0.01797600 0.01797600 -0.67664000 -0.66481000 -0.65844000 -0.63433000 -0.64235000 0.65536000 0.68256000 -0.00541230 0.02609900 0.06968200 -0.03202800 -0.64339000 0.000 0.000 0.000 0.000 1.766 1.766 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 1.766 1.766 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 0.000 6.78405896 11.64117502 7.32227340 8.91441742 -1.26222672 10.64679116 -0.06145073 NA 8.89421935 7.25145211 NA 6.32227430 5.27841972 11.08450155 9.23892201 1.52351177 5.26049619 8.95398454 4.26049995 12.47966602 9.59791418 6.09844061 9.88985406 NA 8.25371892 8.95676963 -1.06130019 NA 10.97542986 1.93858691 12.89231116 13.04308626 5.36483503 10.12653993 6.99926494 10.07106919 2.84546998 1.74592570 -1.06130019 7.39389665 8.50842509 9.33088686 9.74270050 -0.06145073 8.94559658 5.74592301 9.82350306 6.32227430 10.80584816 NA 12.48618695 NA 2.74592570 10.35123454 7.55213803 NA 9.27060603 5.73298548 8.19359780 NA 13.95607380 -1.06130019 10.16919032 0.93854927 9.59945672 2.84546998 9.63814191 9.66223043 14.001621 6.881083 9.775409 12.907956 9.921563 9.749944 13.402605 13.222020 9.347632 9.927964 11.993343 10.889125 8.133326 8.705098 NA 8.479666 11.633580 9.81585350 5.06785380 9.36692955 9.03132654 8.83187091 8.49388706 3.98296620 0.93854927 10.82655151 7.88401296 2.93856809 5.08831548 6.37261436 10.84433245 9.32227362 9.05491331 9.42942034 9.01271085 -1.06130019 11.74638516 9.65966862 10.88401326 10.97954402 11.98586374 8.41430300 9.33517416 7.78091962 4.26049995 8.74328135 -0.06145073 11.28175510 7.18174363 10.03198703 9.74511899 6.97748830 13.95633475 11.18174338 10.95468125 12.44574462 10.56382165 8.37943859 -0.06145073 TCGA-E2-A14X 55 0 NA 972 breast stage iiia t2 n2 m0 female 2009 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino 4 4 4 NA 2 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 10.9053817 10.1284982 11.8932189 9.6579235 7.9286652 8.4624732 10.4299474 10.7488439 12.5010701 13.4806411 11.2856400 11.0026747 3.5525123 11.9840363 2.9979246 7.9123127 6.4030683 9.6399793 9.1387574 6.9809210 -1.0020212 8.5744119 8.0814067 9.0581506 11.4807356 6.7528155 0.8052925 8.9809213 11.2282484 3.0423292 9.8725248 6.4115551 -2.0023102 6.9197691 9.9408087 10.0039030 9.3642498 10.6089524 10.4703646 11.8558114 1.4573842 11.6012062 15.3726020 8.3215566 9.3913128 10.9769955 10.3507987 3.7528128 -1.0020212 9.3576771 10.9316183 1.4573842 10.4160438 5.2267474 7.4634941 4.9048164 8.7988275 11.7870537 10.0098537 11.3850025 12.4651510 7.2387190 11.5650518 10.6195881 11.0183867 11.8530881 4.8434161 11.6295594 9.7817444 -1.0020212 10.2061620 11.0979328 3.9074579 5.5903834 9.1310698 11.0440285 9.8256672 11.1532202 5.5448223 9.3045590 13.1651497 11.4438477 9.9586536 9.3062666 0.780250 0.780250 0.937520 -0.020412 -0.051991 -0.052126 -0.051316 0.993770 0.935230 -0.646590 1.850900 2.358700 -0.044957 -0.065963 -0.377690 0.327850 0.327850 -0.042772 -0.042772 0.641580 0.051530 0.018383 -0.332600 -0.332600 -0.332600 0.324790 0.324790 0.324790 0.458710 0.322700 0.780250 -0.349850 -0.020412 -0.052126 -0.052126 -0.071073 -0.071073 0.993770 0.935230 0.973370 -0.030677 -0.022469 -0.649210 0.255700 0.255700 -0.360450 -0.353270 -0.065963 -0.065963 -0.377690 0.327850 0.289450 0.289450 -0.042772 -0.023566 -0.023566 -0.701090 0.051530 -0.011453 0.243110 -0.332600 -0.332600 0.279160 0.324790 0.324790 0.134330 1.080800 0.735680 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 0.179 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 0.179 9.8268575 12.9584726 3.7258502 9.4199924 5.1057200 11.3507987 4.4897805 3.6126356 8.1988261 8.4907823 -1.0020212 7.5734669 3.9521285 10.4244545 9.8232840 0.9979066 10.0105522 11.3042742 5.9286640 8.1400347 9.2444128 7.8512374 10.8457680 2.5828932 10.0840639 9.9345656 4.5677827 -2.0023102 10.3144920 3.3198491 13.3860122 13.2124744 7.2170959 11.2756509 8.8767450 9.1188134 2.5214780 0.3198491 NA -2.0023102 8.4877757 9.6057203 9.4902815 4.4073188 9.5990948 7.1603192 9.6543525 7.3400023 10.5236931 1.3198491 12.6840451 2.7528128 2.9979246 10.1177053 6.1043597 9.3170352 10.0491366 8.3433328 10.4563342 8.5791281 14.1087779 1.9979427 11.0067064 -0.4171550 9.0504957 5.2073814 8.4126130 8.9426397 9.054159 8.242291 8.722441 11.984036 10.838312 11.748530 6.980921 11.303134 9.320909 10.969112 13.301387 11.838902 9.357677 9.339447 1.997943 7.155275 11.575474 10.127211 7.525405 9.580065 9.369704 8.748635 9.424035 7.582890 7.838705 11.285640 9.277538 3.283329 9.584767 9.660850 12.669413 11.177681 9.195759 8.241102 9.360967 9.757816 11.395359 9.364250 10.287946 9.857462 13.242217 11.374324 10.098261 9.728398 7.278698 9.660048 10.472141 10.416044 5.698369 10.733907 8.798828 7.979552 14.840708 10.659260 10.595282 12.074326 10.680922 9.091345 4.904816 TCGA-E2-A14Y 35 0 NA 2109 breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 2 NA 1 6 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.774378e-07 9.6195957 9.8305702 12.0731904 8.5881888 8.7370134 8.8238442 10.2820496 10.4093684 10.6215361 12.2759027 10.3608268 10.2573030 2.0823620 16.6989692 3.6673358 9.2942655 3.0823790 8.3815853 7.0307444 9.0116357 NA 9.4885823 5.4399289 9.4843235 11.7662492 7.0423795 1.0823620 7.3631483 12.3535485 1.6673472 7.6331238 8.7548027 -0.9175699 4.4399289 8.9231551 10.8917435 8.9952666 10.0589415 8.7226221 10.9500422 NA 9.4399293 14.5797302 6.6928121 9.1671858 10.1625287 9.7512624 3.6673358 NA 8.8604545 10.8905371 0.0824301 11.5916574 2.5418122 6.1591932 4.3677764 7.8472491 12.1877948 9.4020493 12.1741433 12.4570093 4.5742287 11.3983759 10.4305522 11.0300143 11.2703479 4.1480393 11.6892451 10.1685136 NA 9.9025563 9.4388293 0.0824301 2.9892662 10.7675641 9.9081311 10.3596647 9.4497920 0.0824301 10.2346621 14.1895535 11.1797511 9.8077436 9.3075847 -0.6729700 0.6847700 0.5936100 0.0196430 0.0051359 -0.0178030 1.4214000 0.0253900 -0.0022859 -0.7757500 -0.7757500 2.6651000 -0.0151910 -0.1069700 -0.0734760 -0.0734760 -0.0734760 -0.0037395 -0.0037395 0.3225300 -0.0341790 0.0298880 3.3536000 3.6569000 0.1506900 0.1074500 0.1074500 0.1074500 0.8390300 0.0232860 -0.6729700 -0.1339600 0.0051359 -0.0121620 -0.0483630 -0.0391220 -0.0391220 0.0253900 -0.0022859 -0.0022859 0.0242680 0.0242680 -0.8049500 0.0269350 0.0269350 0.0269350 0.0335490 -0.1069700 -0.1069700 -0.0734760 -0.0734760 -0.0734760 -0.1093300 -0.0037395 -0.0626290 -0.0626290 0.3064900 0.0000000 0.0298880 -0.7048700 -0.6551100 -0.6518700 0.0097276 -0.6749000 0.1074500 0.0269350 -0.7743100 -0.0359930 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.408 0.000 0.000 0.000 0.000 0.000 0.574 1.333 0.000 0.000 -0.028 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.408 0.000 0.000 0.000 0.000 0.000 0.574 1.333 0.000 0.000 -0.028 0.521 6.2013182 12.8238443 5.7688777 6.9341261 1.5365503 11.1951426 0.0824301 6.8961580 8.3792934 9.1130443 NA 6.2722024 7.9832439 11.1075168 9.3815853 1.6673472 5.0131138 10.5428332 10.2875597 9.6560245 8.5220836 6.1591932 10.7244290 0.6673018 8.3677795 10.8293114 0.6673018 -0.9175699 10.1678498 4.4399289 13.3084884 12.5301063 6.6137585 10.1295012 10.6493827 10.1611953 2.7828069 2.2522945 0.0824301 NA 7.5941297 8.9802227 7.1430730 3.6059447 9.3923312 7.7653716 9.7253315 7.2219283 9.4693176 3.4043037 11.7037424 3.2523097 4.3303074 9.8135774 7.4280042 5.1047434 8.0963979 6.0248914 6.9025560 9.2622863 14.0280955 NA 9.7432645 NA 10.9434642 3.7262318 8.6078980 6.8505619 12.820153 8.897760 8.913684 16.698969 9.728036 11.606184 9.011636 10.327336 8.560136 10.082377 13.431382 11.845382 8.860454 6.558111 NA 8.115800 10.685540 10.9975098 4.3303074 8.0481615 10.1206105 8.2697294 9.5214291 3.0823790 3.4043037 10.3608268 10.3741236 0.6673018 8.2622866 7.4061974 13.1792571 9.9356869 8.9450148 9.5096901 7.1698398 5.1909032 10.1297671 8.9952666 10.1545099 9.7905991 11.2135912 10.7789102 10.4628383 9.3267411 NA 9.2109131 6.4222280 11.5916574 5.3491636 10.9798447 7.8472491 7.1430730 13.6461098 11.0925557 11.2563667 11.9978833 10.4896451 8.9967624 0.6673018 TCGA-E2-A14Z 64 1 563 518 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 7 2 4 NA 1 1 3 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 5.548757e-07 9.9124060 9.6495059 11.2762809 8.4958011 8.1581057 8.8316410 10.3003371 9.7148615 10.2217930 12.6863867 9.8873504 10.4189682 3.0908873 12.1035819 1.8429386 9.3186897 5.9722400 8.7225395 9.4493614 13.0935508 0.8429386 13.7107659 5.6111399 9.7754221 11.4720852 4.4576665 1.6503050 12.5903835 10.9376938 2.9304157 8.5029523 7.5468597 0.4279279 4.0128815 9.6750552 9.5725771 7.9977745 11.7364474 9.6357466 10.4754972 4.9090434 11.3016192 14.3924101 7.9158394 9.3156471 10.7255993 11.5915685 4.1648828 NA 9.0633347 11.0720755 -0.1569810 10.1341270 6.2775850 7.4203847 4.8202351 9.9882517 11.6647303 10.7252172 11.8686150 12.3611176 7.6884462 10.6111407 9.2000683 10.7332206 10.9214407 4.0908873 12.2415664 11.1088643 -1.1571418 10.4488987 9.6430473 3.3671474 6.1648848 11.0891030 10.1364279 9.6414281 9.9799474 4.3665181 9.0253506 13.3494498 12.9325723 10.5995126 9.4759514 -0.33305000 0.37528000 0.55939000 0.32398000 0.28891000 -0.01546600 0.31370000 0.32576000 0.32576000 -0.35658000 -0.35133000 1.66340000 0.00194180 0.34242000 -0.36103000 0.02904400 0.02904400 -0.25924000 -0.25924000 -0.03789800 0.17996000 0.00000000 -0.30686000 -0.15426000 -0.15426000 0.09861400 0.28961000 -0.27953000 0.05110300 -0.30451000 3.57860000 -0.34458000 0.32398000 -0.34698000 -0.01546600 -0.04102400 -0.03880400 0.32576000 0.32576000 -0.37572000 0.34430000 0.28723000 -0.35476000 -0.36306000 -0.36624000 -0.33445000 -0.33445000 -0.37583000 0.67196000 -0.34893000 0.02904400 -0.00109010 0.00097064 -0.25924000 -0.02644100 -0.02644100 -0.03789800 -0.34271000 0.00000000 -0.32147000 -1.02950000 -0.15426000 0.03411300 0.39584000 0.28961000 0.93345000 0.29867000 -0.29485000 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.343 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 0.000 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.343 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 0.000 9.8443645 13.0591717 8.5047344 10.3075021 3.4055023 11.1038758 4.2005122 1.6503050 8.3428023 8.9237737 0.4279279 7.3348096 7.4940083 10.6251355 9.2384905 4.1648828 9.3811451 9.5537627 9.7445774 10.6900136 8.5845582 7.3782316 10.8047677 4.0524072 7.2900391 9.9728832 3.5978410 NA 11.0792695 3.5978410 13.5196847 12.4619153 8.0548447 10.1225669 9.6202116 9.8873504 5.0524115 2.8429587 NA 6.1828055 9.2255803 9.6078280 8.8708622 5.0908831 10.4211308 7.9436184 10.7588356 4.9722377 8.9396715 NA 11.1395858 3.2352675 3.3023922 9.4063336 6.4053508 5.4576665 9.6226756 8.7009373 7.4391460 -0.1569810 14.0962129 -0.1569810 10.1933430 0.8429386 8.5433961 4.1648828 8.0303085 8.4922125 11.437225 6.570877 8.914419 12.103582 10.055453 11.312089 13.093551 11.817909 9.077774 10.128936 13.043472 10.596591 9.063335 11.874485 NA 7.587790 10.832706 10.777016 6.859765 8.736258 9.268172 7.453981 9.753584 8.022865 6.837310 9.887350 7.217995 -1.157142 5.584424 7.960625 10.702879 10.419913 8.760328 8.344793 10.073577 7.574276 12.125733 7.997775 10.151295 10.420385 10.460424 9.918435 10.078970 8.499381 NA 9.401760 6.935713 10.134127 6.209278 10.796061 9.988252 7.350751 15.850268 10.353226 10.682554 12.449708 11.803320 9.322736 2.427928 TCGA-E2-A150 48 0 NA 1935 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.179111e-06 2.774378e-07 10.5439190 9.3351500 11.7151905 9.6578009 7.9710296 9.1827449 9.2685523 10.3690973 11.2041852 13.2059163 10.6119041 10.0899035 -1.3050752 11.7797134 0.6949248 11.4754448 7.0872220 8.4663946 6.3022350 3.7823666 -1.3050752 11.0530067 8.4647430 9.4958049 11.0419726 4.6491038 NA 10.5190682 9.8679574 1.6949248 10.2966758 9.6285957 NA 5.1867580 9.6786112 10.4766745 9.6337494 10.4692803 10.0049496 11.4042043 4.1543402 4.0872252 14.9753858 7.8814401 9.1927569 11.2150325 10.6574396 3.9043589 NA 10.4266482 11.0756366 NA 11.1085330 4.6256446 6.8034298 7.0524572 10.5126881 11.5194660 9.4655689 11.1872590 12.6802133 8.8623231 10.7886527 10.3641400 11.3890452 11.6243483 5.3531151 12.6237934 8.9628622 -1.3050752 10.3544550 10.0791491 4.8746150 5.3814045 8.5497735 9.7427106 10.2150325 10.3633469 0.2798873 7.0655928 13.1669611 12.9708112 9.7068311 10.4901330 0.459000 0.459000 0.556550 -0.346180 1.187900 -0.283410 0.036088 -0.404840 0.428050 -0.356790 -0.356790 1.262300 1.158000 0.198470 -0.336760 3.656900 -0.067056 0.715470 -0.357280 -0.386720 -0.366010 -0.067726 -0.357490 -0.357490 -0.355560 0.516990 0.547000 -0.041295 0.514410 0.349980 0.459000 0.066945 -0.755130 -0.520920 -0.339640 -0.505770 -0.528900 -0.404840 0.421330 0.422170 0.087969 0.061651 -0.432350 2.887800 0.036229 0.036229 -0.505460 -0.555220 -0.553370 -0.359310 -0.067860 -0.403660 -0.526750 0.715470 -0.347670 -0.350670 -0.386720 -0.366010 -0.505720 0.833920 -0.357490 -0.357490 -0.401410 -0.511970 -0.041295 -0.362830 0.282000 -0.236060 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.547 0.547 0.459 0.459 0.514 0.514 0.000 -0.236 0.000 0.000 -0.375 -0.375 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 0.000 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.547 0.547 0.459 0.459 0.514 0.514 0.000 -0.236 0.000 0.000 -0.375 -0.375 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 0.000 8.4729820 15.2362890 3.2184712 9.1827449 4.5775497 12.9291237 1.6949248 9.3726246 8.1645470 8.5403950 5.4893214 8.5139186 4.2184635 10.8206413 9.4329972 1.6949248 8.2836195 9.3531164 10.2901624 8.6821691 8.8471137 7.6256424 12.1893856 3.9986829 9.0612273 9.6899655 3.0168350 NA 9.3096148 -0.3050752 12.3549009 13.0951841 8.2243355 10.1414714 10.1435376 9.5182723 5.9428335 2.6949025 -1.3050752 NA 8.9698654 9.3003846 9.9362924 2.0168172 8.6795086 5.8547761 9.8203184 5.6606891 9.8754357 6.2026998 12.6347596 2.8648300 3.8648300 9.8473927 5.6970454 4.3673291 8.8735699 7.5652697 5.6949053 9.4909445 13.1639744 0.6949248 10.9487525 NA 6.7929373 4.4497925 8.5372553 6.5277944 13.899539 6.546654 7.859812 11.779713 9.430461 10.787662 3.782367 9.673615 9.414294 11.323123 13.296850 10.950524 10.426648 8.519864 NA 7.559091 11.461848 10.3279002 3.1543402 8.9237235 9.2379367 8.4925667 8.9092607 6.9756760 4.6256446 10.6119041 4.7823666 -1.3050752 9.2966758 9.5588202 13.2773410 10.5110887 5.5528873 8.7447535 10.1336968 6.6017960 10.6688426 9.6337494 9.7690464 9.4556250 12.8293313 10.8763678 10.2751635 8.7757225 NA 9.3798464 6.2026998 11.1085330 6.0347550 9.6998277 10.5126881 8.0353336 13.9919645 10.9750958 10.2360016 12.8551704 9.6786112 9.2360015 0.6949248 TCGA-E2-A152 56 0 NA 2128 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 6 3 1 NA 1 6 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.913097e-06 7.976338e-07 9.8951379 10.3377920 11.6572473 9.5552600 7.7043761 9.4275886 10.6826552 10.1615663 11.9167122 15.0279288 9.7861919 10.9079727 0.6627524 17.9756510 2.3631430 9.7301515 3.7920016 8.7261122 4.5206988 12.4226053 -0.3373387 12.6522890 6.9341803 8.8264675 10.6940737 8.8963366 2.9106367 9.0646633 10.5164165 0.2476845 9.9630696 8.8697314 2.1221426 4.6169105 9.7036917 10.7478576 9.3931873 11.1724921 10.2979818 12.2265092 11.3128713 9.7640362 16.4693988 7.1435475 10.0758161 10.8156356 10.8263667 3.9106463 4.9481196 8.7475254 11.8916861 0.2476845 11.2872841 5.1056613 6.2173063 5.5815802 9.7207087 11.3850977 10.0175173 11.5618851 12.7290586 7.0847818 10.5886423 9.9583426 11.0520795 11.2551741 4.7920016 11.7284698 11.5093828 NA 10.5733598 8.9733297 2.1273691 5.9295046 10.4020758 8.9201048 9.2718958 9.7771101 2.1221426 9.2966205 12.6178221 11.2228110 10.2911626 9.6563632 -0.129050 0.242600 0.258510 -0.545350 0.000000 0.312050 0.308840 -0.112380 -0.112380 -0.127490 -0.127490 0.363740 0.291470 -0.100560 0.208050 0.191280 0.191280 0.289240 0.289240 -0.994460 0.289720 0.664880 -0.550120 3.656900 -0.534320 -0.528010 0.204990 0.204990 0.273120 -0.081244 -0.129050 -0.112860 -0.545350 0.312050 0.312050 0.308840 0.308840 -0.134750 -0.112380 -0.112380 0.289560 0.300060 -0.127490 -0.527900 -0.527900 0.269650 0.269650 -0.100560 -0.138740 -0.534220 0.191280 -0.535840 0.200560 0.289240 0.289240 0.289240 -0.907010 0.289720 -0.543290 0.262900 -0.550120 -0.517670 -0.530960 -0.528010 0.204990 0.193860 -0.505180 -0.162850 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.240 0.240 0.273 0.273 -0.103 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.512 -0.224 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.240 0.240 0.273 0.273 -0.103 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.512 -0.224 9.2476795 14.9043279 7.7997084 10.1035863 1.0300535 11.8640753 NA 0.6627524 8.6947629 9.1843175 -1.3371565 8.4657664 1.6627068 10.2120204 9.0983874 2.5696126 5.9388409 9.1364229 11.4583509 9.7016360 10.2486326 7.9550390 11.3687813 3.3065685 8.2663434 9.6457107 -0.3373387 NA 9.9230486 -0.3373387 11.9660697 12.6011021 8.2192232 10.2893387 8.6725456 9.5778495 5.4176061 1.8326470 0.2476845 -0.3373387 7.9573377 9.9704872 10.6132730 2.1221426 10.1415221 6.1545711 9.7193548 6.6739450 8.9271596 -0.3373387 9.2672703 3.8721688 3.4176095 9.3151946 4.9871662 2.8326470 9.6864715 7.7475257 8.1803866 3.1221426 13.8055421 -1.3371565 10.9133116 NA 6.2401464 4.1862787 8.7435345 7.9434877 11.679003 5.581580 9.011445 17.975651 9.463617 10.282478 12.422605 11.218504 9.018278 10.907973 13.017931 7.486084 8.747525 9.034494 NA 7.024661 10.827310 11.612726 7.889129 9.276506 9.346589 8.251432 10.841852 6.611084 8.422605 9.786192 7.007013 2.247685 8.407551 7.765742 13.110317 10.222094 6.980129 8.505068 10.724088 4.470075 10.962755 9.393187 10.410910 9.858704 11.407971 9.622719 10.836082 8.789421 9.885512 9.485941 3.520699 11.287284 9.023564 11.216337 9.720709 7.138451 13.406868 10.280644 10.036126 12.481998 10.480900 10.065196 NA TCGA-E2-A153 51 0 NA 707 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 5 3 NA 3 1 1 1 4 4 4 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 10.4121730 9.7282005 11.5297324 8.9545069 8.7992654 8.9833297 9.9504578 9.3618414 10.7535198 12.8375885 10.6609061 10.2149781 0.7385517 13.2690571 3.6130365 10.8015150 6.8046589 8.2595154 9.0784196 12.5801338 2.8540555 13.1803033 5.5286463 9.4945474 10.7000192 7.5502119 NA 9.6514588 8.6849884 1.9609565 7.9928109 8.2542695 NA 5.3630589 9.5416242 9.8798252 7.9316842 11.7834189 9.4676237 10.8828028 NA 11.6194284 15.3932055 7.2037826 9.5566191 10.7163264 11.2240634 4.6454596 2.4755259 8.8313266 10.6864499 -0.8463244 11.1447745 6.7460641 5.6130395 4.3630589 10.2706007 11.5526178 10.6791278 13.1437996 12.6162370 8.6985713 11.1048917 10.3492745 11.0806441 10.8475295 4.3630589 12.3848282 11.2203689 NA 10.6384298 9.3235320 3.2419164 5.8401082 10.5491411 10.0887721 10.2854639 9.9374237 5.1308856 10.2404066 13.5251794 12.8444780 10.0717249 9.4990123 -0.080807 1.021200 1.030400 -0.061152 -0.066989 -0.078011 0.184950 -0.279530 -0.279530 -0.069600 -0.069600 0.607740 0.000000 0.000000 -0.071873 -0.071873 -0.071873 -0.080674 -0.080674 0.029466 0.164000 -0.069583 -0.446200 0.245130 0.245130 0.146820 0.146820 0.146820 0.565610 -0.080807 -0.080807 0.029184 -0.061152 -0.078011 -0.078011 0.184950 0.184950 -0.279530 -0.279530 -0.279530 0.180260 0.180260 -0.069600 -0.093667 -0.093667 -0.093667 -0.093667 0.000000 0.000000 -0.071873 -0.071873 -0.071873 -0.071873 -0.080674 -0.080674 -0.080674 0.029466 0.164000 -0.069583 -0.506810 -1.171600 0.245130 -0.066654 0.146820 0.146820 0.565610 -0.007472 -0.394810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 0.000 9.2237278 14.6801062 7.8224918 10.0014473 1.1786190 10.2809565 0.7385517 NA 8.2647428 9.1773612 NA 7.9990969 5.0115896 9.9536980 9.6414470 2.1536108 8.4710196 9.3122166 10.3096901 10.4822819 9.2104885 6.8883171 12.3594002 3.1536108 9.1265868 9.7441941 3.5459190 0.1535460 10.8678525 2.8540555 13.1407822 12.3500554 8.0990506 10.1925260 8.7101132 9.2905981 4.7974644 1.7385517 0.7385517 6.9737857 8.2647428 9.9872877 8.8082431 3.0604971 7.6775611 6.8260323 9.9793607 7.2568946 9.3896212 NA 10.2443811 3.1536108 4.5459251 9.9112970 6.2839199 -0.8463244 9.6702919 9.2699509 4.0115851 0.7385517 13.9341467 2.3235430 10.3341378 -0.8463244 9.4789124 5.6454596 7.7683167 8.8644134 13.000371 4.960961 8.208889 13.269057 10.557152 10.566177 12.580134 11.936196 9.192526 10.509509 13.447294 11.394100 8.831327 9.641447 0.153546 7.343432 11.252626 11.039685 7.125151 9.157827 9.178747 7.779316 9.892096 6.392012 6.908495 10.660906 7.363061 4.323529 7.313478 5.149772 12.958343 10.604818 8.615086 9.152197 11.737395 3.854046 11.207224 7.931684 10.488439 9.984122 11.064624 10.076934 10.467624 8.843605 NA 9.316426 2.738573 11.144774 9.242395 10.453387 10.270601 6.708196 13.980751 9.982537 10.294437 13.119752 10.727727 9.393206 0.153546 TCGA-E2-A154 68 0 NA 591 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 3 NA 3 1 1 1 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 2.774378e-07 9.940466889 9.582892026 11.653147773 9.778455993 8.759554012 9.046652027 9.874776682 9.978633675 9.765333014 13.147531800 11.128040476 9.823468512 6.613421148 12.987401754 4.383690470 9.537299368 4.922107439 8.200823098 11.779476259 13.623285650 4.161291138 13.959631479 1.798714147 9.476192508 11.274458061 5.874012465 NA 7.974363535 10.123226719 -0.008682243 7.674364604 6.705615801 NA 2.691802133 10.480715894 10.375073977 10.436901911 10.774777260 10.343964938 11.793482118 5.313296650 11.706044533 14.963429558 8.344428186 9.505097372 11.644662656 11.408694827 4.849348800 NA 9.061490546 10.878590328 -0.008682243 10.617078500 5.013739159 4.120650535 3.450802153 10.284266459 12.071354391 10.246988388 12.463425849 12.925521265 7.646005646 10.505590569 10.312807416 11.330384562 11.020656928 6.258157075 11.738723512 10.557899508 NA 10.495692165 9.203257939 4.451784778 4.078831823 11.400230131 11.036446737 10.444125772 10.161294665 9.517868950 9.994887559 12.268657084 11.369393523 10.873248382 9.202041032 -0.5262400 0.7840800 0.7802200 0.1367200 0.1367200 -0.3471000 0.0000000 -0.0180780 -0.0180780 0.4711500 0.4711500 0.4711500 0.1456300 0.1559100 0.0000000 1.2041000 -0.0631660 0.0407510 0.0259520 0.4975300 0.1724200 -0.1173000 0.0146090 0.0146090 0.0146090 0.0512450 0.0512450 0.0512450 0.3866700 -0.5262400 -0.5262400 -0.0230180 0.1367200 -0.3471000 -0.3471000 0.0000000 0.0000000 -0.0180780 -0.0180780 -0.0180780 0.4811300 0.4811300 0.4711500 0.1339100 0.1339100 -0.2447200 -0.2267500 0.1559100 0.1685000 -0.0011288 0.0000000 -0.0631660 -0.0631660 0.0407510 0.0259520 -0.3531600 0.4975300 0.1724200 -0.1173000 -0.5856200 0.0146090 0.0146090 -0.5397700 0.0512450 0.0512450 0.3866700 0.3283400 -0.0015243 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.215 0.000 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.215 0.000 8.151240856 13.064507078 7.824259970 9.931683353 0.991390325 10.505590569 -0.008682243 -1.008682243 8.849350676 7.304252743 NA 6.957154291 0.991390325 10.112903258 9.530528459 3.383690470 6.830573516 9.254638919 9.680494028 9.464060482 9.219202167 8.052065873 10.335110610 2.239306381 10.446696871 9.854781601 4.276772076 NA 10.123226719 0.576377015 13.101363544 11.635000448 7.008177599 10.121296632 7.752921159 8.975788081 2.991372184 1.313303907 1.798714147 10.385832425 8.883153404 9.066848828 10.012349660 2.161307264 8.041408917 6.874012465 10.406054881 6.046652573 9.628900241 NA 12.538384706 2.898266407 4.606080917 10.164978180 5.720513787 NA 9.678745370 7.511006212 2.576328637 -1.008682243 13.767545663 1.313303907 10.294579627 -1.008682243 9.097278157 6.779272855 7.417634829 9.355504388 13.977570 5.635226 8.274458 12.987402 10.594996 10.596386 13.623286 12.249788 8.907249 10.954266 12.878971 12.104461 9.061491 8.982891 0.576377 7.514932 11.203866 10.893745 8.057459 8.364235 8.731150 9.487225 10.397559 5.239299 8.587559 11.128040 6.591283 3.945570 8.002597 7.893504 10.433276 10.236328 9.654038 8.033029 12.077506 2.691802 12.551637 10.436902 10.510514 9.936814 11.901825 8.998397 10.435349 9.069520 NA 8.970695 1.991354 10.617079 8.331220 10.453872 10.284266 6.933884 13.736098 9.563122 10.129641 12.831558 10.549312 9.369665 NA TCGA-E2-A155 58 0 NA 640 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 1 2 NA 3 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 7 0 0 0 0 0 0 1.24847e-06 4.855162e-07 10.9950060 9.8089848 12.5225948 10.3119389 8.3974222 8.9633458 10.6299547 9.2521110 10.0758715 13.7068312 10.2434057 10.2703542 0.7595820 13.8617844 4.1746301 7.0845204 5.5924810 8.0465325 6.4600299 12.8468318 4.1969925 14.8701413 -0.8254657 8.6574353 11.2049498 7.9177790 1.3445445 7.3269121 9.4249259 -0.2404180 8.1476074 7.4296561 NA 3.7292156 9.9563971 10.2524446 9.1837562 10.6371297 11.2953514 11.6187365 -0.2404180 11.9881081 15.3844997 8.8266568 10.6687331 11.6240341 11.4011902 3.8750625 1.6340821 10.1879502 10.3746066 NA 11.2358299 3.2620873 4.1519075 3.1746301 9.9522938 12.2660629 9.5077829 11.3816418 13.0889659 7.3470553 11.4049482 10.7578654 11.7142710 11.4944407 5.4507527 12.1797257 12.3990061 NA 10.1215338 8.6061250 1.5008530 3.3039122 9.9067949 9.7810328 10.2890206 10.3934934 2.5669369 3.4600348 11.3286545 10.0161918 10.0079129 9.2746328 0.0120450 0.0120450 -0.0029519 0.0084224 -0.0025454 0.0028615 1.8007000 0.0621690 3.6569000 0.0145570 0.0145570 0.0145570 0.0025839 0.0025839 0.0221120 0.0221120 1.9858000 -0.7301500 0.0163730 -0.7364000 0.0110690 -0.0011604 -0.7461500 0.0638850 1.7312000 -0.0115250 -0.0115250 -0.0115250 0.0225320 0.0117660 0.0120450 -0.0042062 -0.7419700 0.0028615 -0.0012595 -0.7353700 -0.7407500 -0.7272400 0.0073090 -0.0321580 0.0000000 0.0095364 0.0145570 -0.0022469 -0.0022469 -0.0022469 0.0096757 0.0025839 0.0025839 0.0221120 0.0221120 -0.7321400 -0.7321400 -0.7301500 0.0163730 0.0163730 -0.7364000 -0.7344500 -0.0011604 -0.7418900 -0.7461500 -0.7082200 0.0081439 -0.0115250 -0.0115250 0.0225320 0.0010576 0.0074481 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 7.0875169 10.4320154 8.4988081 8.2108009 3.3055620 10.8321693 1.1745982 -1.8252101 7.7763982 4.4034450 NA 8.4987854 0.1746621 10.6910662 9.3051981 2.0815101 7.6962283 9.2883696 11.3403196 9.6273836 10.1688254 7.8628778 8.9600799 -0.2404180 9.2203873 9.8080769 -0.2404180 2.6340588 10.8817709 3.3039122 11.5939293 12.1137475 5.5583319 10.2667239 6.6299554 9.1237246 5.4784089 0.1746621 -0.2404180 2.7595820 8.1633120 9.3395345 10.6554177 3.2620873 9.3552888 5.1746261 9.7335265 7.0294960 9.9415704 -0.2404180 8.1476074 2.9819805 4.3243714 10.1682523 7.2954870 4.1288213 8.6340592 8.9568068 8.6309820 -0.8254657 13.8494267 -1.8252101 10.1123691 NA 4.0572683 4.3644534 8.3791986 7.9706673 14.457148 6.344553 8.703082 13.861784 9.401040 9.984797 12.846832 13.707044 10.711603 10.453367 12.335129 11.064702 10.187950 8.012255 -0.240418 8.557252 11.092373 9.6609598 7.6624676 8.7708172 7.8202862 8.6320082 10.5980875 4.6824216 4.3243714 10.2434057 6.7099027 0.4965135 2.1746301 7.4566501 10.7390152 9.5924800 7.9144079 9.4022434 12.1628684 4.4414171 12.7385709 9.1837562 9.9888094 10.1097925 13.6261606 7.9042480 10.7555926 9.4611854 1.1745982 8.2098388 5.3243750 11.2358299 6.4646470 12.3244540 9.9522938 7.7001484 13.4760165 10.6649770 9.6819266 11.6063862 10.3039105 9.9803714 0.4965135 TCGA-E2-A156 61 0 NA 726 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 2 NA 3 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 0 10.9807240 10.0116527 12.0980529 10.2598971 8.1511612 8.4075010 10.8516011 9.0648365 9.3097073 13.2433312 11.2699976 11.1946720 -0.4781452 13.3076659 3.8437327 8.0216507 7.0295998 8.5441724 11.0211524 13.4787253 1.5218046 14.1809645 6.1942309 9.4063721 11.2463186 4.2222481 NA 8.1800160 10.2699976 -0.4781452 7.9605968 5.8072081 1.1067503 2.8437427 10.4525421 10.8014153 9.8392173 12.0947418 10.4211616 11.9237509 NA 11.8389347 14.3412354 7.6635545 10.0754341 9.9944956 11.6115862 3.6092704 5.5878930 9.2205094 11.3283544 -0.4781452 11.2841868 8.3952488 3.7697294 4.0453643 9.5946073 11.5083579 10.3507346 11.6929815 12.8912658 7.7312579 10.8181475 10.8616547 11.4162436 11.6616758 5.2766939 13.1329448 11.9883911 NA 10.3562758 9.0551344 4.1157574 3.6092704 10.9904288 10.3080744 10.2716742 9.6510878 1.1067503 6.2497260 12.9844348 11.9475452 10.2394812 9.6549469 0.00000000 0.00000000 0.00000000 -0.00110870 -0.01354400 -0.00180140 -0.00076498 -0.00124730 -0.00124730 0.00388540 0.00388540 0.00032659 0.00152550 0.00361710 0.00260420 0.00260420 0.00374650 -0.00069303 -0.00069303 -0.00166290 0.00013863 0.00610900 -0.00138580 -0.00138580 0.00045060 -0.00899060 -0.00899060 -0.00899060 0.01307400 0.00000000 0.00000000 0.00194180 -0.00110870 -0.00180140 -0.00180140 -0.00076498 -0.00076498 -0.00124730 -0.00124730 -0.00124730 0.02188400 -0.00013862 0.00388540 0.00249690 0.00249690 0.00249690 0.00249690 0.00361710 0.00361710 0.00260420 0.00260420 0.00374650 0.00374650 -0.00069303 -0.00069303 -0.00069303 -0.90137000 0.00013863 0.00610900 -0.94598000 -0.97514000 -0.00138580 0.00485790 -0.00899060 -0.00899060 0.00662210 -0.00083160 -0.00443120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.4166219 11.3719916 8.1511612 9.1764407 2.1329716 10.5939374 1.1067503 NA 8.0686993 7.7838999 0.5218548 5.6588970 2.9812316 10.4075011 9.0394740 1.5218046 2.9812316 9.0878587 11.7938513 9.8210127 9.4672485 8.2187725 10.8192942 2.1067838 9.8683185 9.8493574 5.4760025 NA 9.5566038 3.5218046 12.5270784 12.0785503 6.8705324 10.3782303 7.4166227 9.0434052 0.5218548 -0.4781452 0.5218548 5.1942289 9.4495826 9.1584294 9.2833560 NA 9.2336439 5.8616552 10.3852167 5.6303297 9.3578550 NA 11.3447739 2.5218046 7.9605968 9.6106063 5.0222879 NA 8.6198366 6.4875892 4.7312593 NA 13.6827004 -0.4781452 9.7190215 NA 9.1584294 3.7697294 7.7744702 8.7979293 13.325028 5.076392 9.025630 13.307666 10.212676 10.425687 13.478725 13.565943 9.528832 11.041441 12.362779 9.917339 9.220509 8.922684 NA 7.487589 11.511909 11.078790 7.651088 8.716562 9.378230 8.640746 10.420958 4.731259 6.731258 11.269998 4.769735 NA 7.701714 6.457264 9.011653 9.419650 9.225708 7.481807 13.484249 1.106750 11.092723 9.839217 10.222244 9.926946 11.958256 9.415106 10.651732 9.776833 NA 9.606733 NA 11.284187 5.788592 10.710394 9.594607 6.922684 13.731639 10.136515 10.542090 13.010147 10.317033 9.839217 1.106750 TCGA-E2-A158 43 0 NA 450 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.358222e-06 3.121176e-07 8.82365034 8.90015857 12.03351640 9.61942218 8.59597352 9.55711940 10.02926417 11.06062325 10.67461477 13.00661168 11.21523988 10.80027174 5.16938790 12.23445270 3.74054984 9.64001911 6.58442740 7.70780913 11.46006640 6.66459661 NA 8.62882097 8.56627937 8.14688734 10.41840112 3.77707248 -1.54498190 7.12047947 10.61343782 -1.54498190 5.58442740 6.26249893 -0.54477143 2.84745579 10.26169335 9.57926502 8.91355037 8.25442539 9.97919566 11.75177321 2.45514965 10.79721836 14.45007165 8.04653526 11.17303215 10.24182172 10.78913762 3.88141012 1.91456452 9.62757127 10.08450029 -1.54498190 10.19323593 2.97870817 7.32550874 4.70307301 7.64001929 11.95872104 9.72075882 12.59533442 13.17447906 5.06985251 11.12513601 11.35051642 11.15015447 11.32512305 5.04010776 12.14339402 8.86771365 2.26249329 9.25442539 9.93643860 4.78139119 2.91458366 11.11000351 10.26370570 11.23260452 9.91611145 0.04012092 7.80387215 12.75792542 10.05459170 9.90274366 10.96640220 0.00513590 0.92108000 0.94282000 0.07973500 0.75280000 -0.00802440 -0.98054000 0.04968200 0.01004900 -0.01972600 -0.01972600 3.65690000 0.93732000 0.03608800 -0.93223000 0.06065100 0.06065100 0.86672000 0.01140000 0.17302000 -0.93651000 -0.70496000 -0.90312000 -0.90312000 -0.90312000 0.05451800 0.05451800 0.06952500 0.04854600 -0.64151000 0.89626000 0.06465400 -0.94695000 0.10074000 -0.98201000 -0.95312000 -0.94649000 0.03286000 -0.00097017 -0.93570000 -0.93341000 0.94343000 -0.95631000 1.77770000 1.77770000 0.02827300 0.10599000 0.03608800 -0.94160000 -0.90798000 0.08233200 -0.92741000 -0.92741000 0.01754400 -0.00235530 -0.00235530 -0.94291000 -0.92540000 0.01237600 0.09130000 -0.90312000 -0.90312000 0.09638000 -0.84171000 0.06952500 0.03232500 -0.02685100 -0.91957000 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.877 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.825 0.000 0.861 -0.946 0.000 0.000 0.000 0.000 0.876 0.876 0.802 0.000 -0.354 -0.354 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.877 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.825 0.000 0.861 -0.946 0.000 0.000 0.000 0.000 0.876 0.876 0.802 0.000 -0.354 -0.354 6.18985420 11.47681778 6.37995706 7.14164430 3.00297249 12.57999201 0.45512334 NA 8.86771365 4.40934341 1.04012092 9.08358915 -1.54498190 10.69533880 9.19069979 3.62507173 6.03257255 10.34084007 6.33778601 9.55514894 9.59876288 8.34540791 10.94021830 NA 8.98944673 10.06432242 2.15558734 NA 8.34083996 4.70307301 12.84390102 13.42740558 6.07719599 10.07398808 7.01738636 9.73417393 6.85602332 0.04012092 NA 7.08813842 9.00589061 8.21503203 10.34084007 2.04012092 10.48283205 5.49953659 9.36653576 8.09900005 11.08882017 5.56366762 11.48908287 0.04012092 3.62507173 10.93139379 6.20165738 3.74054984 7.81049452 6.81708726 5.08450228 7.44949700 13.57367930 -1.54498190 11.39472291 NA 8.92681901 8.83018306 9.02119765 7.10619545 8.066168 8.884551 8.478898 12.234453 10.567257 10.864535 6.664597 11.712826 9.478898 11.957230 13.843834 12.747034 9.627571 9.675522 4.664597 7.488566 10.356765 10.79332295 7.66946266 9.12844395 9.62569478 6.43813813 10.63664383 3.58442139 5.67431093 11.21523988 10.78997568 0.77703039 9.97821551 9.14902254 13.08364622 10.69295116 7.41224550 7.32242213 7.60742871 5.46636936 11.37465888 8.91355037 9.68155591 9.86665472 11.21877106 9.35676491 11.05016802 8.68876329 NA 8.51650138 4.70307301 10.19323593 6.25604447 12.06856716 7.64001929 7.89393551 15.78202960 9.98213198 9.99672444 12.40086188 10.62099284 10.27771457 0.04012092 TCGA-E2-A159 50 0 NA 762 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 4 3 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.989553e-06 8.661322e-07 9.97566973 9.27375784 11.99094189 9.56250747 8.25785358 8.87993086 10.58381606 10.67803721 10.25995612 12.70761121 10.15087340 10.38468134 1.51470301 11.87087882 3.26958677 10.31276874 6.43356541 8.52453075 7.00655498 11.10949312 0.09963185 9.96694317 7.41556855 9.72199700 10.95531164 5.17291149 -0.48539797 9.78832861 11.40591612 1.97412545 8.80356803 9.29606181 NA 6.20120256 10.21687473 10.38043531 9.62453266 10.38583717 10.21036524 11.73583595 10.06641026 8.88320840 14.69003712 8.96403641 9.78616506 10.98637723 10.73326519 3.32205793 3.15856324 9.50196593 11.57201684 NA 9.79315149 5.90702043 8.20818899 5.39734435 9.09872483 11.56676051 10.36058397 11.02076157 12.44894572 7.52872211 10.98637723 10.02818290 11.04924807 11.31661241 4.92409513 12.06857123 7.84113155 NA 10.69243295 9.62844408 2.90977310 6.50905605 10.87225401 10.12710974 9.80472089 9.80932279 1.97412545 9.56523082 12.08420162 12.35075234 10.15268527 9.21687460 0.26975 0.26975 0.50620 -0.27786 0.29517 -0.26312 -0.34870 0.27553 0.27206 0.30074 0.30074 0.29779 0.85304 -0.26733 0.02806 0.02806 0.02806 -0.25067 -0.25067 -0.28417 -0.24180 -0.25237 -0.17145 -0.17145 -0.17145 -0.24314 -0.24314 0.29135 0.29963 0.28659 0.26975 -0.26480 -0.26155 -0.26516 -0.26312 -0.34870 -0.34870 0.27553 0.27206 0.26737 0.27710 0.28026 0.30074 0.28089 0.28089 -0.28168 -0.23423 -0.51671 -0.28096 -0.24788 0.02806 0.02806 0.02806 -0.25067 -0.25745 -0.25745 -0.25540 -0.24180 -0.25237 -0.25745 -0.17145 -0.17145 -0.25629 -0.24314 -0.24314 0.29963 0.29183 -0.25781 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 0.000 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 0.000 9.2845398 12.9514135 0.8366513 9.2306639 4.9576453 11.6537736 1.8366109 5.2289456 9.2745901 8.9545328 -0.4853980 8.1494586 4.0382606 10.6936780 8.7143743 4.9409654 7.8411316 10.4980520 9.9710563 9.2944213 9.2063844 8.0065550 10.9433239 2.8366311 7.8207636 9.3396607 2.0996655 NA 10.3464051 1.6846392 12.6900956 12.5951032 7.3788879 10.2099303 9.6568090 8.8689512 3.6846280 3.1585632 0.8366513 3.4688961 8.3570523 9.5659109 10.1871274 1.9741254 10.3582148 6.3156025 9.7441217 5.0382650 9.5342928 1.6846392 10.9728522 4.1294149 4.0692897 9.8305648 6.6242720 8.3091180 9.5175170 9.5069323 9.5508757 10.2302351 13.1833100 1.5147030 10.6868170 -0.4853980 10.2737580 2.4215869 8.6426962 8.2977004 10.196626 8.549501 8.457217 11.870879 10.102011 11.540880 11.109493 8.483369 9.273425 10.471441 13.145538 8.879931 9.501966 7.125727 NA 7.733870 11.510999 10.91077156 5.86343054 9.69833744 9.07024977 9.38814605 10.66442053 7.71927313 6.22894757 10.15087340 10.09731451 0.09963185 9.23921591 8.63416196 11.54191688 10.86922692 7.14405861 9.16844272 9.32607664 8.20295246 11.20334354 9.62453266 9.84393769 10.14678834 12.03101760 10.41594601 10.44173919 9.49412715 10.35311804 9.78980211 8.98332598 9.79315149 6.85899799 10.84867074 9.09872483 7.71993294 13.61121127 11.00178831 10.41971290 12.39256126 11.16642642 9.38506665 4.70452895 TCGA-E2-A15A 45 0 NA 710 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 13 white not hispanic or latino 3 3 1 NA 3 5 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 6.935946e-08 10.40189846 9.84413987 11.63845171 10.03351730 8.59897144 9.15264839 9.63598832 10.46399532 8.81830000 15.17055529 11.08052463 10.86433521 -0.64430710 13.04966567 3.48507899 8.14370004 5.48508221 8.84263257 8.98879288 12.58281179 3.26268872 12.87844043 0.35580564 9.27092997 11.84263261 4.98515429 -1.64430710 9.11318764 11.17896581 1.52571811 9.05189572 7.62492410 -0.64430710 5.35579859 10.42188684 10.41074103 9.61082609 11.28468607 10.06229363 10.81727709 11.16234720 10.80391387 14.52683754 8.89100505 9.81266540 11.40972346 11.74098594 3.48507899 5.23843913 9.58281188 10.11651759 -0.05919428 10.96866607 5.45383032 6.74381518 4.69564868 10.11485358 11.71334961 10.10105174 11.86903173 12.99089218 9.08201568 10.68419203 9.86417670 10.98606473 10.77127528 5.20128883 12.70286527 9.84162693 -0.64430710 10.58100507 9.59420235 2.52812119 5.44326185 10.23154701 10.41716876 10.30489475 10.71004701 2.16314446 7.21066647 11.67292755 10.67941535 9.92137578 9.20598454 0.3130600 0.5723700 1.4037000 -0.4844300 0.3346400 0.1539700 0.4300700 0.1917800 -0.5122800 3.6569000 1.2174000 1.8408000 0.4268800 -0.0542860 0.2421800 2.6226000 2.4586000 0.1663500 0.1981700 0.0000000 0.1529400 0.3422600 0.1046800 0.2025900 0.2025900 -0.4716000 -0.0008316 -0.0008316 1.1799000 -0.4808100 -0.4397300 -0.0163570 -0.4844300 -0.0642400 -0.0384730 0.4319300 -0.3058000 0.1333200 0.0682350 -0.0816050 0.2823200 -0.7626100 -0.5182500 -0.4730000 -0.4730000 -0.4730000 -0.4730000 -0.5703100 0.1650500 0.3858400 0.3214100 -0.2696100 -0.2696100 0.1663500 0.1981700 0.1981700 -0.0366740 -0.4723600 0.3297900 -0.2867900 -0.4214500 0.2025900 -0.4828100 -0.4958000 -0.0008316 -0.4949600 -0.7062100 0.1769400 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.277 -0.277 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 0.000 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.277 -0.277 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 0.000 9.0768968 12.9280833 6.3501507 9.1695788 2.5257181 10.9012448 0.9407306 -1.6443071 8.6225841 6.6504185 NA 8.4338817 -0.6443071 10.6266769 8.6754698 4.2137750 7.4164935 9.1807563 7.3726057 10.3621237 9.4867992 7.5004555 10.2641903 2.4432618 8.7438148 9.8223839 1.1631767 0.3558056 10.7478466 1.1631767 12.0044922 12.0920938 7.6013504 10.4834696 9.3402160 9.4675854 4.7987401 1.3558056 -1.6443071 1.1631767 8.3614223 9.3926581 8.7340924 2.2626737 8.5553472 7.4029217 9.8044302 6.9815068 9.8131785 NA 8.6754698 2.9407681 3.4432618 9.7838069 6.0071372 6.1436995 9.2961111 8.4991810 7.9007618 0.9407306 13.3940307 1.3558056 11.2634394 NA 8.7841578 4.5846138 8.6900710 8.1190101 14.066163 7.093890 8.852652 13.049666 9.824305 10.696482 12.582812 12.868229 10.390940 10.837597 12.653789 9.946852 9.582812 8.915175 2.748118 7.503003 13.040272 10.5731495 7.1695783 8.3487361 9.9672836 9.7357175 9.7187332 6.9815068 9.0501556 11.0805246 6.5894175 -1.6443071 5.7651873 9.0403445 10.4528421 9.8162535 9.3409281 8.8695251 13.0106574 6.7000929 10.9038561 9.6108261 9.8198328 10.2551545 12.2640026 9.7997772 10.3868095 9.3522710 0.9407306 9.0948272 7.1950011 10.9686661 6.9482551 10.1542694 10.1148536 7.2012878 12.5286938 9.9031742 9.7914678 12.4821794 10.2020715 9.1371574 2.6777337 TCGA-E2-A15C 61 0 NA 694 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 2 2 1 4 4 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 11.5335244 10.1888361 12.0589388 10.2340989 8.3487282 9.2742617 10.9357544 9.2526654 9.4902492 13.0161815 9.3065174 10.5022351 0.2630344 13.4611213 3.3219281 9.5530533 6.0089888 8.9068906 9.5321611 13.0794848 5.1210154 13.6791722 5.7865964 9.7228553 11.6023277 5.2326608 -0.3219281 7.5422580 8.8826430 1.2630344 8.2364926 7.1898246 -1.3219281 4.8875253 10.2872506 10.0552824 10.1654095 11.6503338 10.5495922 12.1623913 13.3163947 12.4548133 14.2410596 8.1589631 10.1769211 11.7128709 11.4781629 4.0356239 -1.3219281 9.3767766 11.9098931 -0.3219281 10.8722131 5.1210154 5.9354597 3.4854268 10.5344974 11.8073549 10.3724298 13.3371759 13.0108078 7.7813597 11.4571756 11.3718681 11.3217027 11.6980101 5.3923174 11.9984494 11.4858293 -1.3219281 10.1001367 9.7286008 3.3834969 4.3785116 10.8533096 10.2302607 10.2578592 11.0287349 4.6322682 10.2784495 13.4118817 11.5190465 10.2055489 9.9032793 0.0038259 0.0038259 0.0038259 -0.0034627 -0.0034627 -0.0128510 0.0331270 -0.0089906 -0.0089906 1.2793000 1.2793000 1.2793000 -0.0024885 -0.0024885 -0.0071958 -0.0071958 -0.0071958 0.0000000 0.0000000 -0.0158790 0.0015255 0.0086135 0.0294660 0.0294660 0.0294660 0.0300290 0.0300290 0.0300290 0.6151600 0.0410340 0.0038259 -0.0037395 -0.0034627 -0.0128510 -0.0128510 0.0331270 0.0331270 -0.0089906 -0.0089906 -0.0089906 -0.0027707 -0.0049397 -0.7196300 0.0112610 0.0112610 0.0112610 0.0112610 -0.0024885 0.0098669 -0.0071958 -0.0071958 -0.0071958 -0.0071958 0.0000000 0.0000000 0.0000000 -0.0158790 0.0015255 0.0086135 -0.6633700 0.0294660 0.0294660 0.5759400 0.0300290 0.0300290 0.6092500 0.0303100 -0.5913600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.581 0.000 0.000 0.000 0.000 8.9932215 12.8888954 8.4708622 9.3434078 4.7224660 10.6424128 4.0000000 -1.3219281 8.1618877 7.9541963 NA 7.7075800 1.2630344 9.8728288 9.4262648 0.2630344 9.3110671 9.5030306 10.3995984 9.9020736 9.1594677 7.8021932 10.6209529 1.6780719 10.1132212 9.3871557 3.4854268 NA 10.1598713 2.9259994 12.5079928 11.8068718 7.4362951 10.4938554 7.9044841 9.1106138 4.1699250 0.6780719 -0.3219281 4.4854268 8.7865964 8.9020736 10.4425289 3.5360529 7.3288365 5.8379432 10.6355368 7.3327079 9.5219930 -1.3219281 10.1431281 4.2927817 4.1375035 9.7009945 5.5489298 7.3327079 9.1507627 8.3201236 8.1957413 NA 13.4559950 1.0000000 9.9977440 -0.3219281 7.0268001 5.2630344 7.9212459 8.7360636 12.2716778 4.1375035 8.9943534 13.4611213 10.4561490 9.9348703 13.0794848 12.8684368 9.3009291 11.3440739 12.8369971 9.5014391 9.3767766 8.5622424 0.2630344 7.6553518 11.3425192 11.036174 7.061776 9.336283 9.714932 8.145677 10.681165 6.770829 8.207502 9.306517 6.523562 3.432959 5.643856 6.166715 12.114653 10.732337 9.507795 8.369815 12.926296 7.830357 12.612516 10.165410 10.807355 10.056909 11.100925 10.415742 10.738430 9.569096 NA 9.136684 8.477354 10.872213 7.928370 10.780510 10.534497 7.504620 13.599773 10.122051 10.470049 12.768184 10.985273 10.525129 2.137504 TCGA-E2-A15D 47 0 NA 526 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 3 1 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 11.259648 9.908574 11.954624 9.455896 8.443611 9.368388 9.992817 8.680035 9.942350 12.255521 11.149845 10.354174 6.895900 13.163844 5.056367 9.857197 7.190412 8.641327 9.699613 12.782852 2.293871 14.735808 6.130365 9.839623 11.018865 7.941836 -1.513337 8.452294 8.819665 5.417245 9.522683 7.151846 -1.513337 4.486508 9.933076 10.707492 10.201184 11.030266 10.461999 11.723121 8.606747 11.453015 14.954926 8.387979 10.250552 11.695353 11.230502 5.071471 2.734439 8.912774 11.179343 -0.513543 11.135092 5.552598 5.293863 4.656433 10.357644 11.684033 10.889788 12.449947 12.781632 7.990335 11.558977 11.318679 11.425537 11.172134 5.025667 11.574138 11.838829 -1.513337 10.294669 9.323349 4.746345 4.636259 11.145613 10.104895 10.277672 10.101679 2.656428 9.508183 13.099378 11.803639 10.028090 9.969821 0.84159000 1.51100000 1.50620000 0.00249690 0.00249690 0.00000000 -0.00249380 0.14384000 -0.02644100 0.52187000 0.52187000 0.52293000 -0.00631740 -0.00631740 -0.00788630 -0.00180140 -0.00180140 0.00027728 0.00027728 -0.00263220 0.00305220 0.51751000 0.04046800 0.04046800 0.04046800 0.00097064 0.00097064 0.00097064 -0.00567570 0.00638710 -0.00705760 -0.00429290 0.00249690 0.00000000 0.00000000 -0.00249380 -0.00390080 -0.26240000 -0.02644100 -0.02644100 0.51542000 0.50377000 0.55620000 -0.00498440 -0.00498440 -0.00498440 -0.00498440 -0.00631740 0.00819590 -0.00788630 -0.00180140 -0.00180140 -0.00180140 0.00027728 0.00027728 0.00027728 -0.00263220 0.00305220 0.51751000 -0.55637000 0.04046800 0.04046800 0.52888000 0.00097064 0.00097064 -0.00567570 0.00889200 0.00319100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 0.000 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 0.000 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 0.120 8.93772044 11.92413129 8.55663020 9.79371011 3.88602331 10.75065859 1.29384130 NA 8.95615106 8.67386131 -1.51333711 8.88952130 3.87882341 9.89907908 9.40983683 1.29384130 8.92113756 9.28983308 9.76959754 9.78686178 9.64153609 6.85719725 11.09845621 2.29387072 10.25964841 9.62989243 4.77191198 NA 10.66205877 3.57396826 12.72990641 11.72207477 7.70325508 10.15406442 7.81068987 8.83634328 3.65643917 1.07148811 0.07148811 9.84351142 7.93772044 9.37449136 10.02663728 5.47519516 7.91352853 5.84406170 10.54280824 7.67633371 9.44070558 -0.51354304 9.80448713 1.94594474 4.84405919 10.21678829 6.61156045 4.18695212 8.90646945 8.95818438 6.35069525 0.07148811 13.80938803 1.07148811 9.97183551 -1.51333711 8.45948900 6.32571380 8.00614540 8.27114411 12.610879 4.214428 8.795986 13.163844 10.187816 11.185214 12.782852 12.164119 9.314646 10.799109 13.708247 9.952586 8.912774 11.026395 -1.513337 7.539077 11.442704 11.1873824 7.5924174 9.0563649 9.0188653 7.9703251 10.6258687 6.6413278 7.7857173 11.1498450 6.5792661 3.2413979 6.4580522 6.0120300 12.4752827 10.3798108 8.9933126 8.4594890 10.8766782 6.0639386 11.6104948 10.2011841 10.3503084 9.8653460 10.7982576 10.1308162 10.6892453 8.9753536 0.8084262 9.1283442 5.2279759 11.1350916 8.0752240 10.6804319 10.3576445 7.8017265 13.8859875 9.8296950 10.3054908 13.1762343 10.6554947 10.2355406 3.0100637 TCGA-E2-A15E 40 0 NA 630 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 1 NA 1 1 3 3 2 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 10.5002250 10.1722352 12.0151258 9.8761751 8.5232287 8.9076815 10.2353748 9.3859234 10.2474374 13.6080626 10.6639757 10.6051946 2.8247679 14.3326374 4.9243090 10.3285977 6.8311983 8.9046376 10.0855236 12.4485229 4.1048818 12.9331097 7.7039174 9.3870144 11.2066239 6.4097337 -0.9825056 8.9903967 10.2335566 4.4097371 7.8020517 7.8085800 2.4768483 4.3028162 10.4230904 9.9939811 9.6042569 11.9407445 9.9694303 11.9078713 5.4268082 10.6630755 14.8884560 8.4035596 10.1154491 11.6182592 11.2465363 5.1671652 2.1873560 9.6845286 12.9512921 NA 11.7095966 5.4603592 4.9716125 4.8247729 10.7052301 11.8321998 10.5414690 12.7707383 13.0061905 7.6173301 10.8877817 10.6640748 11.0135374 11.3995006 5.8375951 12.5371761 11.3088756 NA 10.4278684 9.6693657 4.3050366 4.4768483 10.8703367 10.5796595 10.3760683 10.4701731 4.8753967 10.0174170 13.1028065 12.9779621 10.2498379 9.7376612 -0.120040 -0.032178 0.151590 0.159500 0.660870 0.128890 0.155470 -0.120820 -0.410690 -0.673250 2.049900 1.164100 0.094782 -0.024661 -0.119130 0.669000 -0.117830 -0.100130 -0.098945 0.136580 0.146370 0.170160 -0.413660 1.468700 -0.012024 0.125050 0.125050 0.042166 0.355940 -0.081206 -0.120040 -0.377970 0.149500 -0.117570 0.131990 0.103800 0.128740 -0.104080 -0.410690 -0.404620 0.164600 0.154120 -0.708910 -0.684600 -0.393630 -0.393630 -0.061286 -0.024661 -0.100660 -0.106840 -0.119130 -0.107100 -0.107100 -0.123170 -0.098945 -0.383020 0.143550 0.156360 0.166400 -0.412010 -0.413660 -0.106480 -0.101050 -0.404510 0.058652 -0.396420 -0.113120 -0.695140 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.139 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.156 0.156 0.000 1.142 -0.394 -0.394 0.000 0.000 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.139 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.156 0.156 0.000 1.142 -0.394 -0.394 0.000 0.000 8.29354154 13.05487821 7.56816363 10.03004165 3.18734020 10.47223044 0.60236186 0.60236186 8.61733008 8.22443152 -0.98250562 8.09423290 3.10487338 9.55269234 9.32689346 0.60236186 8.37496903 9.42998684 10.41080748 10.57056634 9.50181709 7.91223489 10.59484588 1.82476785 10.35559633 10.06590386 6.49315094 NA 10.52620226 4.37496990 12.80286952 12.07676153 7.80205166 9.82959431 7.49719719 9.59201052 8.02023215 1.01742311 0.01735184 6.23658637 9.09423264 9.17223522 9.50324636 5.32119935 9.26957392 6.83759640 9.90387582 6.00610275 9.66037123 0.60236186 11.28097968 2.47684825 4.66127075 9.72971182 6.66803826 2.33933695 8.83280048 7.25582172 5.66127360 NA 13.62994004 NA 10.48196276 -0.98250562 7.25103640 5.79877635 7.96578428 8.60987424 12.625442 5.061811 9.231736 14.332637 10.530651 10.417229 12.448523 12.531021 8.939377 10.842376 13.197248 11.451002 9.684529 8.219541 NA 7.357267 11.277454 11.219541 7.675628 8.709161 8.886239 8.328030 10.320861 4.994697 7.352807 10.663976 4.798776 5.061811 7.850307 6.922323 12.176973 10.039785 8.686302 8.862907 12.059589 4.476848 11.106119 9.604257 10.138303 10.069985 11.337089 9.981758 10.686302 9.076762 NA 9.581519 5.374970 11.709597 6.125942 10.529664 10.705230 7.392457 14.195965 9.946675 10.175395 13.391641 10.158247 9.970158 2.017423 TCGA-E2-A15F 64 0 NA 658 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 5 NA 2 1 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 6.935946e-08 10.6033666 10.2185721 12.3425247 9.6677353 7.6699820 9.3570056 10.5285822 9.6893074 8.9444447 13.5481538 11.0168359 10.3174255 2.3420427 12.7093789 2.4575418 9.6885689 6.0517136 8.8966439 7.8682281 12.2544456 1.7571086 14.5763238 3.5119740 9.9198743 11.5054952 5.0050182 NA 7.8966442 8.6057154 2.2165169 8.4816065 7.7570926 NA 3.6150749 10.7181806 10.4304017 10.9216854 10.6154623 9.6714777 11.9133338 1.5644269 10.9096944 14.1730985 7.9336647 9.7134688 12.3890654 11.3380578 5.0050182 7.4644518 8.9345121 11.4960294 -0.2429768 11.0784571 6.4575319 6.2083046 3.7570979 10.4339313 11.5662579 10.4824590 12.2241887 13.0305969 8.9407279 11.0404705 10.4330497 11.9047746 11.3434634 5.4985604 11.1307735 12.2534472 -1.2429768 10.4112811 9.8014867 2.7580046 5.4713371 11.3107219 10.6707301 10.9438260 10.4977167 3.8014898 7.1833575 12.1578387 11.3188579 10.3226708 9.4250912 0.0142220 0.0142220 -0.0673620 0.0280910 -0.0554250 0.0619690 0.0082271 -0.5412900 -0.5185700 3.6569000 0.6249600 0.8408500 -0.1032600 -0.1070800 0.0669940 0.0669940 0.0669940 0.0689840 0.0689840 -0.0920990 -0.5815400 -0.0143350 -0.0088217 -0.0088217 -0.0088217 0.0117100 0.5935400 0.5531900 3.6569000 -0.1331700 0.0142220 0.0129650 0.0280910 0.0619690 0.0537050 0.0082271 0.0082271 -0.5412900 -0.5342800 -0.5113300 0.0621120 0.0549770 -0.6116800 -0.4755100 -0.4755100 -0.4755100 -0.4755100 -0.1070800 -0.1070800 0.0836640 0.0669940 -0.6007800 0.1061700 0.0689840 0.0689840 0.0689840 -0.0920990 -0.5815400 -0.0143350 -0.6026800 -0.0088217 -0.0088217 0.0202340 0.0117100 0.5531900 -0.4736100 0.0777500 -0.5510400 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.541 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.541 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 0.000 8.6119610 11.4627251 7.6669859 9.5335258 4.5592838 10.5712745 3.6639821 0.3420996 8.5724759 7.0790207 -1.2429768 7.3601623 2.6639821 10.7863799 9.5644475 1.0790196 8.4435934 8.9295203 10.4678992 9.6111818 9.8442439 8.1791572 9.9017509 3.2165169 10.1135446 9.8399070 4.0424955 0.3420996 10.8045575 3.4575286 11.2708203 12.6866285 6.2083046 9.6587138 9.9744446 9.7599077 3.9665504 6.5052860 -1.2429768 5.8863746 9.3030224 9.2796742 9.4250912 5.5644483 7.8502987 5.8966448 10.6833886 5.3116811 9.5052856 NA 10.4700495 3.0790196 5.5644483 9.8709651 7.0910979 5.6025816 10.2046925 7.2041759 5.7228758 2.4575418 12.9203492 0.3420996 10.3049512 NA 7.9859114 5.0969407 7.6907830 9.2469405 14.8283390 7.5119803 9.1979619 12.7093789 10.0343104 10.2972208 12.2544456 12.5674635 9.3579348 11.2546951 12.7848259 10.5704731 8.9345121 7.0835219 0.3420996 7.3973375 13.0045010 10.8636556 6.5449953 9.2031422 9.3800597 9.1234148 9.9761220 6.2489465 8.3231467 11.0168359 5.6759570 3.0050226 4.1494138 7.8241772 11.7343726 9.5844353 10.5425452 8.8616915 12.7706771 6.4009494 12.7777949 10.9216854 10.1445716 10.4879873 10.9096944 9.3588635 10.6420263 8.6366761 0.7571086 8.5899986 7.2569389 11.0784571 5.9567653 10.3611825 10.4339313 7.0005995 12.7443567 9.6774455 9.6096222 13.1727684 10.0396021 9.3088009 0.3420996 TCGA-E2-A15G 76 0 NA 554 breast stage iia t2 n0 m0 female 2009 NA yes mixed histology (please specify) 0 white not hispanic or latino 5 5 3 NA 3 1 1 1 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 6.242351e-07 10.8783399 9.8767685 12.3301271 9.4870823 8.1560623 9.3139609 10.9485348 9.7088859 9.0673682 13.8656018 11.1674181 10.8864837 1.8830342 12.9468134 3.8005790 8.4204782 7.2009584 8.5252961 9.3881938 13.5398659 3.1054434 14.2241920 6.8216439 9.5555949 11.2052224 7.1182600 NA 7.9586716 9.8481868 0.2980717 7.3855441 5.9029442 NA 3.5204725 10.0794410 10.2551833 10.5773050 12.0220267 10.2566341 11.8928725 0.7130799 12.2402293 14.1418389 9.6995369 9.8609470 11.9641574 11.1594268 4.5204725 4.8830440 9.0168996 12.2993723 0.7130799 11.2931418 4.4135602 4.4680033 3.4680098 10.4135585 12.2341058 10.5976710 11.6545333 13.0320147 8.1928994 10.9035609 10.8670983 11.4779904 11.6079366 5.3855449 12.5618396 10.6482839 NA 10.3921591 8.8767686 4.5072745 4.0706727 10.9347059 10.1699866 10.0788945 9.5648678 1.5204977 10.1761322 12.9399073 11.3793428 10.5621329 10.1113281 -0.03378000 1.05530000 1.06300000 0.21049000 0.23673000 -0.09288300 0.33900000 0.00930030 0.00068386 -0.00803370 -0.00803370 -0.00803370 0.26309000 0.13789000 -0.14773000 -0.14773000 -0.16916000 0.27750000 0.32430000 -0.17082000 -0.05200100 -0.11169000 -0.12682000 -0.12682000 -0.12907000 -0.07748700 -0.07748700 -0.07748700 0.02439800 -0.03109500 -0.03378000 -0.08294300 0.23673000 -0.09288300 -0.09288300 0.33900000 0.33900000 0.00930030 0.00930030 0.00068386 0.22436000 0.22436000 -0.00803370 -0.08608400 -0.08608400 -0.08608400 -0.01795000 0.15151000 0.22575000 -0.16124000 -0.14773000 -0.16916000 -0.16916000 0.27750000 0.32430000 0.32430000 -0.17082000 0.32929000 -0.11797000 -0.44253000 -0.12682000 -0.12682000 0.20885000 -0.07748700 -0.07748700 0.00000000 -0.11836000 -0.60499000 0.228 0.228 -0.148 -0.148 0.324 0.324 -0.171 0.329 -0.118 0.889 -0.443 -0.127 -0.127 0.209 0.209 0.000 0.000 0.000 1.055 0.000 0.000 -0.118 -0.594 -0.125 -0.125 0.237 0.237 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.228 0.228 -0.148 -0.148 0.324 0.324 -0.171 0.329 -0.118 0.889 -0.443 -0.127 -0.127 0.209 0.209 0.000 0.000 0.000 1.055 0.000 0.000 -0.118 -0.594 -0.125 -0.125 0.237 0.237 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 7.7818973 11.5591969 8.5538969 9.5934677 1.7592411 10.9023257 2.2980717 -1.2870081 8.7697565 7.7327095 NA 6.2905479 -0.2868321 9.7684012 9.5827127 0.7130799 7.1097241 9.0350470 10.2933774 10.3415644 9.7233813 8.3351706 10.4779904 2.8830342 9.6245109 9.2905477 9.1591682 -0.2868321 10.3695437 2.8830342 12.7187434 11.6778207 7.4444377 10.0810795 7.6109643 8.9004711 3.1054434 -1.2870081 NA 4.8216439 8.9103354 9.4829568 10.6368177 3.2980864 8.8492127 5.8005816 10.1622674 6.3569748 9.1150650 NA 11.6680422 2.4135670 4.3569748 9.9639857 6.5236905 1.7131239 9.3360859 7.5988155 5.2209142 NA 13.8783792 -0.2868321 10.4282229 NA 8.2425496 5.0706727 7.8603235 8.3055757 13.384192 3.520473 8.504282 12.946813 10.423495 10.692544 13.539866 12.942689 9.088158 11.020035 13.011253 9.841758 9.016900 8.834652 1.713124 7.673121 11.387753 11.1330790 8.2657880 9.0837955 9.5888683 8.2209137 10.6656090 6.3996189 8.7872604 11.1674181 5.7792072 1.7131239 6.4410385 6.9971332 9.7060572 9.9328924 8.5570397 8.2464485 12.6245108 3.6200116 11.6797523 10.5773050 10.7271394 9.9539102 11.6153055 9.4969356 10.8942711 9.1786853 NA 9.4573472 3.8424057 11.2931418 5.3424765 10.6604965 10.4135585 7.3055757 13.9060281 9.9509263 10.2054728 12.8688067 10.3529118 10.2590486 0.7130799 TCGA-E2-A15H 38 0 NA 393 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 1 NA 3 6 1 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.040392e-07 10.6986802 9.7814917 11.7526751 8.9686841 8.7270440 9.5188530 10.1389954 10.0465037 9.8011472 13.8054519 10.7728904 10.9376447 1.6867470 16.0004698 3.4416428 9.9125641 6.7091224 8.4163749 8.6394956 12.9256067 4.0443067 14.2638289 3.0086841 9.2249430 11.4233675 8.6453068 3.7742178 9.9125641 10.5271387 3.4941083 7.5876208 7.0876336 NA 3.8566770 9.7440691 10.5133026 9.1885913 10.6835807 9.5053364 11.0812168 2.4941083 11.4116943 15.0046967 8.5882998 9.5029378 11.1085560 10.5792970 4.8962089 -0.3132978 9.0887003 10.2181356 NA 10.9456146 3.8962040 4.3591768 4.2103187 10.6413140 11.9571955 10.4586563 12.1364187 12.5266468 7.7608956 11.1538502 10.8187140 10.9016804 10.6958829 4.4416428 11.7903698 10.7791810 0.6867918 10.3644738 9.2112958 2.9399788 3.8160364 11.2100711 10.6765034 10.9323068 8.7978897 2.0086662 8.3014642 12.5597175 11.5667202 10.5513272 9.3115497 0.04897100 0.74575000 0.74575000 0.00692030 0.00917030 -0.33067000 0.02707600 -0.23937000 -0.68524000 -0.70980000 -0.69260000 0.70251000 0.00077922 0.00077922 0.00708240 0.00708240 -0.01950000 0.03848900 0.02286900 0.02932500 0.05922300 -0.30251000 -0.63925000 3.65690000 3.65690000 -0.60999000 -0.64243000 -0.64243000 0.11580000 -0.65650000 0.04897100 -0.31780000 0.01112100 -0.31576000 -0.33067000 0.02707600 0.02707600 -0.23937000 -0.68524000 -0.68524000 -0.16663000 -0.20440000 -0.72718000 -0.68606000 -0.68606000 0.02244400 0.02244400 0.00077922 0.01209700 -0.00027269 0.00708240 -0.01950000 -0.05212700 0.03848900 0.02286900 0.05409100 0.02932500 0.05922300 -0.31707000 -0.31303000 -0.63925000 -0.58009000 0.04159900 -0.60999000 -0.64243000 0.11580000 -0.67334000 -0.66772000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 -0.151 8.3923866 13.7036060 8.3051397 9.6676078 2.6867470 11.0335449 0.2716647 -0.3132978 8.8365014 8.0376935 1.2717245 7.5230256 1.8566670 10.4412242 9.0321593 2.0086662 6.9582174 9.7715626 6.1705701 10.1999882 9.7272563 7.2413426 10.2646550 -0.2917686 10.4742486 9.6518170 5.4146734 -0.3132978 10.2829440 2.7742072 12.7650718 11.8629273 7.5815719 9.4949140 7.6951830 8.7978897 5.2103148 -1.3132978 -0.3132978 3.3306158 8.6993788 9.7635698 10.1895859 2.5936406 9.0892012 7.2413426 9.9848167 5.5693969 9.7201772 -1.3132978 12.1222942 2.3871971 4.5936466 9.5864208 6.7547259 5.2717170 8.6711727 7.0530766 8.3627114 1.2717245 13.8125308 -1.3132978 10.7132776 1.0087020 8.8043973 3.6409448 7.4844153 8.9323069 13.297375 5.915573 8.735241 16.000470 10.750823 11.238462 12.925607 13.030773 9.187596 11.004732 13.304566 11.309721 9.088700 6.587622 3.330616 9.833323 11.521028 11.4220986 6.3941128 9.5196441 8.9939551 8.3288060 11.1711567 5.2566107 9.3179313 10.7728904 6.1130191 3.7311507 7.9859620 8.2828878 10.8560528 9.9950931 9.6547008 9.7748798 10.9970829 6.0443067 11.7999021 9.1885913 10.8153930 10.5834649 10.8437853 9.5509403 11.0044494 9.4713891 -1.3132978 9.9488667 6.3732549 10.9456146 6.9859626 10.8669741 10.6413140 7.8765790 14.2752638 9.7440691 10.2152083 12.0130432 10.1109204 10.0437562 -0.3132978 TCGA-E2-A15I 44 0 NA 1692 breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 3 NA NA 1 4 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 2.392901e-06 9.710324e-07 11.3836818 10.0869943 12.3089181 10.1389931 8.3205221 9.5127685 11.4927479 9.6248073 8.6971931 13.2831785 11.3091189 10.7069824 6.8296644 13.1423789 4.1991855 9.4874329 5.9825647 9.0865256 10.7024020 13.3827755 3.7081983 14.4008877 9.1631955 8.6038318 10.9966000 7.3905318 0.0836559 9.7179166 8.2266684 1.8206896 8.2043804 6.9123756 -0.5012385 4.4529446 10.5742273 10.4011232 9.7233527 11.7906383 10.5179914 12.7131432 11.9747348 11.0844149 13.6190265 8.1806715 10.2640342 11.3540060 11.6201198 5.0533373 0.8206487 8.7383467 12.6120833 -1.5014428 11.8505156 5.4056384 7.1497999 4.1711748 10.6642833 12.2108452 10.4803154 12.0820660 13.3793361 7.5458719 10.9181817 11.2219376 11.8339989 11.5936506 5.3567284 12.1337860 10.5022660 -1.5014428 9.9860858 9.0837107 5.0865630 5.8737886 10.2792879 10.9714389 10.3575063 10.0055516 4.1711748 10.6830036 13.0133389 13.5543271 10.3089180 10.1996213 0.01070300 0.01070300 0.00642520 -0.01147300 -0.01147300 -0.01601700 -0.01202400 -0.00443120 -0.00443120 -0.01601700 -0.01601700 -0.01601700 0.00658250 0.00658250 0.00350090 0.04514100 0.00141760 -0.00154000 -0.00154000 0.74518000 0.46997000 -0.02151000 -0.00843850 -0.00843850 -0.00843850 0.04982400 0.04982400 0.04925600 0.02876300 0.05965100 0.01070300 -0.00990420 -0.01147300 -0.01601700 -0.01601700 -0.01202400 -0.01202400 -0.00443120 -0.00443120 -0.00816220 0.47821000 0.47821000 -0.01601700 -0.01185600 0.00000000 0.00000000 0.00000000 0.00658250 -0.00177080 0.00350090 0.04514100 0.00141760 0.00141760 -0.00154000 0.01474900 0.01474900 -0.01739100 0.49286000 -0.02151000 -0.51105000 -0.49110000 -0.00843850 0.00097064 0.04982400 0.04925600 0.02876300 -0.01387500 -0.47997000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 0.000 9.2735352 11.8658898 5.9744811 9.1965844 4.9581792 10.4884974 4.7655347 0.8206487 8.7933689 6.7419226 -1.5014428 7.9581797 -0.5012385 9.5099755 9.6910410 1.4987615 9.3117277 9.5155564 10.9123761 10.8601436 9.9447716 8.4086414 9.7520047 2.8910692 8.9855833 9.2486176 3.5431370 -1.5014428 10.2532182 2.3061164 12.7295191 11.8167260 7.3965937 10.3149318 7.9724537 8.6370200 3.6686751 0.0836559 0.4987615 9.7841504 8.2751812 8.9704234 11.3157317 5.1134588 7.9377893 5.2129934 9.6382994 6.3252965 9.6150922 -0.5012385 11.7069825 3.0223145 5.0533373 10.3154838 5.8147119 6.2061079 8.8263009 7.5594444 6.3442373 0.0836559 13.4320699 0.8206487 9.8937467 NA 8.3504972 5.6984213 8.2078319 8.9975973 12.475565 3.253641 8.786460 13.142379 11.166525 9.628675 13.382776 12.538695 9.544672 11.086760 13.377326 9.374497 8.738347 8.298030 1.083724 7.588861 12.094472 11.142604 8.138993 9.352837 9.193976 8.255304 10.884654 7.375265 7.966354 11.309119 5.617689 1.306087 5.171175 5.693111 10.473163 10.618013 8.621576 8.120800 11.882047 7.076177 12.059432 9.723353 11.011982 9.674921 11.840823 9.774873 10.715191 9.262790 -1.501443 9.550236 7.334799 11.850516 7.420589 11.007533 10.664283 7.444192 13.652261 9.903890 10.572555 12.806234 9.950474 10.118051 2.820669 TCGA-E2-A15J 51 0 NA 1640 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 3 3 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 5.548757e-07 1.733986e-07 10.80554454 9.60314135 12.01575979 9.56259294 8.46930400 9.09072034 10.12216485 9.46281654 10.75776401 12.37321873 11.89860940 10.39325777 1.30655390 13.26453584 5.25408378 9.10929996 8.47647769 8.10837652 11.36512450 12.53227675 0.08420036 14.14654394 4.94213912 9.85931534 10.92572481 4.97493306 NA 10.02079845 11.68221296 1.49922085 7.83011459 7.42697586 NA 3.14305050 9.73760261 11.36821336 10.49849332 11.55583566 10.29604872 11.38660900 12.42484511 11.55193580 15.22973442 7.03174917 9.57734215 9.41133874 11.32475307 4.08415783 5.42993392 8.71473080 10.57768241 NA 11.05282722 4.11390882 4.05378907 5.84792677 10.41283539 12.25450284 11.02691926 11.58284349 13.01360380 7.50482216 11.18547962 10.52187443 11.17801811 11.53193246 5.33208848 13.15629305 11.32872249 NA 10.35912096 9.45775064 3.43513517 4.25408756 11.56124407 10.25617118 10.26986187 9.93434724 0.82113874 9.26241037 13.64481173 12.53210463 9.76305398 9.46281654 0.87129000 1.42080000 1.46680000 -0.01161100 -0.01161100 -0.01761600 -0.02967500 -0.00788630 -0.00788630 -0.83130000 -0.83130000 0.75337000 0.00847430 0.00847430 0.00214920 -0.00041585 -0.00041585 -0.00553750 -0.00553750 0.00597000 -0.00223270 0.01140000 0.00638710 0.00638710 0.00638710 0.00903120 0.00903120 0.00903120 0.01908300 -0.00110870 -0.01491600 -0.00899060 -0.01161100 0.00208050 -0.01422800 -0.02967500 -0.01546600 -0.00788630 -0.00788630 -0.00788630 0.02567100 0.01103800 -0.85039000 0.00166420 0.00166420 0.00166420 0.00166420 0.00847430 0.00847430 0.00214920 -0.00041585 -0.00041585 -0.00041585 -0.00553750 -0.00553750 -0.00553750 0.00597000 -0.00223270 0.01140000 -0.83970000 0.00638710 0.00638710 0.01419000 0.00903120 0.00903120 0.01908300 -0.09749500 0.03256300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.087 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.087 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 0.000 7.12124961 12.29117476 6.59195462 9.18306985 3.45339905 10.95118176 0.49916981 NA 8.46786472 7.56528719 NA 5.61813879 -1.50062605 10.41208732 9.09911080 1.08413231 5.77532188 8.94421278 11.45829428 10.94084535 9.72046488 7.31937678 10.39515183 1.49922085 9.38260501 9.75304539 8.84460315 NA 10.56965438 2.95863855 13.95163226 12.11643582 6.53262087 9.84182818 7.71351712 9.33050529 3.70865077 2.49919533 -1.50062605 6.00699362 8.99904390 9.52779464 10.03350078 1.82113874 8.13747073 6.91282588 10.65306656 7.52986544 9.62525715 NA 8.26738223 1.30655390 4.80297899 9.79447906 7.05631690 NA 9.05857491 6.89580307 4.60772090 -1.50062605 14.56587580 0.08420036 10.06287090 -0.50083019 7.71594346 4.49919533 7.91282588 9.03057941 13.042885 4.784598 9.276453 13.264536 10.298075 11.457569 12.532277 12.924938 9.527104 10.651800 14.067629 11.565287 8.714731 9.244872 3.143051 7.260749 11.247600 11.146207 7.143055 9.006992 9.164534 8.598546 10.424166 5.441713 7.381841 11.898609 3.499195 -1.500626 7.322565 6.140310 10.632019 9.720785 8.826593 8.311375 12.821267 2.499195 11.924594 10.498493 10.258670 10.317780 11.418806 9.830675 10.853723 9.134009 -1.500626 9.382567 1.306554 11.052827 7.524337 10.767129 10.412835 7.535372 14.915187 10.283833 10.443910 13.319327 10.446470 10.034473 1.306554 TCGA-E2-A15K 58 0 NA 275 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 5 5 2 1 3 5 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.774378e-07 10.231439 9.556946 11.986208 9.065642 8.426608 9.891137 10.399883 9.646477 10.266380 13.356267 11.430214 10.583817 2.614427 13.002785 2.862352 8.795583 5.833599 8.395791 10.001371 13.192096 2.073855 13.782907 6.748857 10.198238 10.503174 7.098247 NA 10.157936 9.735317 1.614427 7.311399 6.006749 NA 4.369320 9.522073 10.527694 10.483639 11.287740 10.032811 10.882388 2.521327 11.032020 14.774026 6.061597 10.112283 11.368692 10.988655 4.722958 NA 8.104279 12.569536 -1.385714 10.772409 4.881219 6.871819 5.591712 10.728499 12.026868 10.310964 10.945628 13.036167 8.832388 10.711475 10.654049 11.206654 11.248788 4.521321 11.739198 9.497074 NA 10.232816 8.726870 3.569090 5.556944 10.821140 9.948145 9.816555 9.590995 2.199405 10.539985 12.984642 11.089404 10.237398 9.794962 -0.02294400 0.58274000 1.15640000 0.00249690 0.00249690 0.00388540 0.00694350 0.00000000 0.00000000 -0.63878000 -0.03245000 0.00471900 -0.01664100 -0.00498440 0.00124810 3.23290000 -0.67012000 -0.00705760 -0.00705760 0.00069327 0.58614000 -0.01684100 -0.03472300 -0.03472300 -0.03472300 -0.07187300 -0.07187300 -0.07187300 0.15024000 -0.02294400 -0.02294400 -0.01876500 0.00249690 0.00388540 0.00986690 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00166290 -0.00166290 -0.68003000 -0.01202400 -0.01202400 -0.01202400 -0.01202400 -0.00498440 -0.00498440 -0.05209500 -0.08373100 -0.64631000 -0.64631000 -0.00705760 -0.00705760 -0.00705760 0.00069327 -0.03871400 -0.01684100 -0.70136000 -0.03472300 -0.03472300 0.00374650 -0.07187300 -0.07187300 0.15024000 0.00138680 -0.04251700 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 0.205 -0.292 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 0.205 -0.292 9.7986864 13.0517278 1.4218023 9.8510431 3.4936473 11.0021790 4.1379953 NA 8.7216481 7.0490589 NA 6.5859750 0.1993740 10.1923318 9.5137878 4.1062813 9.5773269 8.7641779 7.8670965 10.5747949 9.8829261 7.5362721 10.4677404 0.9363647 9.9004110 10.0784660 3.2582928 NA 10.7219750 1.9363647 12.0275299 12.0944637 6.9363588 9.8928803 8.2708559 9.3026812 0.6144743 2.9363647 0.6144743 5.5332955 8.5816570 9.8659132 10.3892180 3.7843574 8.1506394 7.2068884 10.4928650 4.9182097 9.6512914 NA 11.7052050 2.7843574 3.6588284 9.5394882 7.0261117 6.7893563 10.0850897 8.2124833 8.1728515 -1.3857142 13.2965477 0.6144743 9.9164986 NA 7.8311767 4.1062813 7.3826154 8.6200556 14.189775 5.647853 8.783103 13.002785 10.666727 11.041744 13.192096 12.276766 9.179171 10.514920 12.934738 8.512276 8.104279 8.735964 1.936365 7.680520 11.163734 11.0240870 7.7616357 9.2189841 9.0375470 9.5735273 10.9309076 7.7488570 8.0448837 11.4302144 4.4217888 0.6144743 5.1062855 7.7592930 9.5145431 10.3705703 8.8835576 8.6464766 11.2189841 7.5627980 10.9334679 10.4836392 11.1586709 10.3170365 10.7108167 10.3213586 10.5359000 8.0738625 -0.3855257 8.8529074 8.4409796 10.7724093 6.0322838 10.6050064 10.7284985 7.3693182 13.4816131 10.2636870 9.9176409 12.7860769 10.7310998 9.6608728 1.6144272 TCGA-E2-A15L 65 0 NA 626 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 black or african american not hispanic or latino 5 5 2 NA 3 5 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 6.935946e-08 10.62661006 9.95759210 11.79277822 9.50330043 8.43911237 9.30366273 10.94013004 9.83999186 10.38644852 8.78731981 10.94853814 10.31056473 -0.64837167 12.82478456 3.67357904 9.30875175 6.37955512 8.28238698 9.60017012 12.66304317 1.35162833 13.15229677 6.47577071 9.47765062 10.90503893 6.76950200 -0.64837167 8.21118454 11.20261778 -0.06340917 8.30001662 6.46539172 NA 4.20963272 10.18453967 10.98736770 10.35164964 11.25327076 9.90959192 11.63314505 1.81110106 10.37990109 15.01888592 9.84904239 10.27014018 12.11112175 11.48382797 3.59957965 4.30584652 9.06846902 11.98407690 0.67355642 11.20398404 7.25553189 4.79459262 4.52157217 10.55377346 11.72723212 10.42244137 13.26547399 13.10361202 8.01342764 11.00157934 10.57542806 11.32391145 11.12355168 4.95156448 12.31571968 9.39809166 0.67355642 10.34988738 9.50710028 3.09312068 5.14606457 10.93872392 10.23848929 9.92529673 9.34033438 4.67357904 9.77686545 12.80105623 12.97906950 9.82129136 9.34741674 1.4490e-02 6.8367e-01 6.9180e-01 7.2710e-01 -1.0412e-02 -1.3168e-02 1.3954e+00 -9.5839e-03 -9.5839e-03 -9.6848e-03 -9.6848e-03 -5.0258e-03 1.0104e-02 1.0104e-02 6.6237e-03 6.6237e-03 6.6237e-03 3.0106e-03 -1.8011e-04 -1.4682e-02 0.0000e+00 7.1503e-01 3.1955e-02 3.1955e-02 3.1955e-02 3.6328e-02 3.6328e-02 3.6328e-02 3.0127e-02 1.4490e-02 1.4490e-02 -8.0514e-03 -3.0889e-03 -1.3168e-02 -1.3168e-02 -3.0444e-02 6.8044e-01 -9.5839e-03 -9.5839e-03 -1.7020e-02 -6.9608e-03 -6.9608e-03 -9.6848e-03 1.0661e-02 1.0661e-02 1.0661e-02 1.0661e-02 1.0104e-02 1.0104e-02 6.6237e-03 6.6237e-03 6.6237e-03 6.6237e-03 3.0106e-03 -1.8011e-04 -1.8011e-04 -1.4682e-02 1.1637e-02 1.8061e-02 -7.1719e-01 3.1955e-02 3.1955e-02 -4.1488e-05 3.6328e-02 3.6328e-02 3.0127e-02 5.2333e-03 3.6752e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.46148027 14.44844711 6.42846570 10.04164752 2.05210284 11.04164759 0.35162833 NA 8.42579119 7.96451820 NA 8.73427370 -0.64837167 10.30911444 9.14362632 1.52155333 6.25251595 9.47188754 11.69899413 10.46766862 9.50639169 7.92150536 11.23982208 0.35162833 8.88789686 9.73102792 2.43911777 -1.64837167 10.18453967 2.15901555 12.70823913 12.11538067 6.99189480 10.00628568 6.50139615 9.09058618 4.15900748 1.52155333 -0.06340917 5.72668956 8.80389087 9.47059075 10.28238698 3.15899940 8.58500571 4.98100779 10.28423349 5.41773777 9.77266246 NA 11.51293898 4.43911112 3.96635663 9.94386830 6.39429462 4.92150298 8.91389199 7.44704685 8.82332488 NA 13.83398491 0.35162833 10.08296864 NA 6.55132221 3.93660967 7.67132168 7.95156273 12.683855 4.906236 8.626610 12.824785 10.209879 10.741819 12.663043 12.874721 9.231998 10.768711 13.730656 10.451655 9.068469 8.726689 4.234294 7.639362 11.461643 10.989180 7.944106 8.829408 9.165431 9.473183 10.224863 5.717972 7.503935 10.948538 5.627773 3.906236 7.433799 7.087713 11.337314 9.751995 8.362877 8.289759 11.767523 3.396050 11.272791 10.351650 9.919606 9.799249 11.389883 8.680325 10.349887 9.250251 NA 9.590335 6.009862 11.203984 8.229700 10.536525 10.553773 7.305846 13.861765 10.251384 10.567789 13.134443 10.060302 9.692056 1.351628 TCGA-E2-A15M 66 1 336 235 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 8 2 4 NA 3 5 3 4 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 1.525908e-06 5.895554e-07 10.97822903 10.52351021 11.70863008 9.85124916 8.24224665 9.72225801 9.27863739 10.49739741 8.50642700 10.92182249 10.84317219 10.86120208 0.04460395 13.28112070 4.09765293 9.09384245 4.11492500 9.24666223 9.88185088 12.61211427 1.04453401 12.99556806 3.47749601 9.19326908 9.98881120 5.14046375 0.30754510 9.58238966 11.09465913 2.72261903 8.82851893 8.07244456 NA 5.45053165 10.30804238 11.19212492 9.88405708 11.25472264 10.41522585 11.37567927 0.30754510 11.43771431 14.37931447 8.62432209 8.82786411 11.22245616 11.19441251 5.35923651 2.36647609 10.04819681 11.97261257 -1.27753398 11.44744385 6.81272283 8.29531069 5.52350864 10.97512787 12.13980355 10.63231593 11.95045183 13.14900610 6.82851861 11.03265499 10.49466501 11.67925871 11.26019271 5.84155051 12.20327431 11.18664546 1.52997083 10.00916813 9.55747634 3.63214023 7.07796182 10.61135352 10.71430932 9.80176170 10.63287827 3.47749601 7.56653130 13.01952651 12.14723590 10.22320327 8.82392956 -0.0094046 0.3996100 0.9253300 0.0389620 0.0147490 -0.0780110 0.4391900 0.1869200 0.1869200 0.2951700 0.2951700 0.5620500 0.2741100 -0.0138610 0.2621600 0.7617800 -0.2240000 -0.1593700 -0.0313590 -0.1801700 0.0310140 -0.0231550 -0.2452900 -0.1190000 -0.1190000 0.2262300 0.2262300 1.6130000 0.5225800 -0.0094046 -0.0094046 0.0366530 0.0389620 -0.0780110 -0.2171800 0.4391900 0.4391900 0.0840550 0.1869200 0.1869200 0.2772600 -0.1611500 0.0209030 0.0244940 -0.0953840 -0.0953840 -0.0953840 -0.0138610 -0.0138610 -0.2815600 0.2621600 -0.2240000 -0.2240000 -0.1500900 -0.0313590 -0.0313590 -0.1825300 -0.2455700 -0.0231550 -0.2232900 -0.2452900 -0.1190000 0.2801000 -0.3203000 0.6710400 0.0000000 0.2728500 -0.2456900 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 0.000 10.3868353 12.2839579 6.0535263 10.0209592 4.6546475 10.4182736 3.4774960 2.3075742 7.7697341 8.8767956 -0.6924549 8.9068596 4.2924652 10.5078585 9.3714173 0.8925076 11.1846013 9.9891041 8.7352348 8.4982205 8.9901987 8.8127228 11.1907252 3.2272328 7.8376538 9.4518062 4.0080117 0.3075451 10.1224223 3.6294965 12.4304547 12.1940950 9.1593219 10.5397938 10.2104504 8.8258982 6.9870525 1.3075451 -2.2771843 3.5554972 8.5712331 8.7183774 10.4676544 7.4758274 6.2761635 4.8100729 9.9826477 6.0490404 9.4282427 0.3075451 11.5061202 3.1820407 4.6651255 9.6583315 5.1090763 6.9964057 9.5263378 10.1727905 7.5867963 5.8258975 14.0413473 2.0445340 9.9399622 NA 8.5906611 6.2733574 8.3066332 8.1727905 12.2755969 7.2539921 8.1160008 13.2811207 10.5471713 11.1833221 12.6121143 11.3760152 8.9047252 11.1946664 13.2708603 10.1835781 10.0481968 9.1593219 -0.6924549 7.8087467 11.8959751 10.615912 7.421315 9.336400 8.059117 8.712005 10.230189 8.154108 8.496574 10.843172 6.269504 4.026393 5.767003 7.537417 11.108742 11.179478 8.199356 7.438572 12.891243 8.064685 11.991777 9.884057 10.831788 9.420447 12.062043 9.686229 10.642405 9.422183 1.629520 8.811829 7.605254 11.447444 7.171759 10.373662 10.975128 7.515400 13.916210 10.578647 10.651684 12.292407 9.622345 9.923202 4.517024 TCGA-E2-A15O 89 0 NA 1545 breast stage i t1c nx m0 female 2010 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 3 1 1 NA 3 1 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 10.7789662 9.6036176 11.0507708 9.6051450 8.6323664 9.2736436 9.8222937 9.1014355 8.5695974 12.9762244 12.6892813 10.4369365 0.7209788 12.4198962 3.4214118 9.6043814 7.9279889 9.2822626 9.0281754 12.9951342 4.5283275 13.6950305 3.5283338 10.3744510 11.3215843 5.0429026 NA 8.5805092 9.8871376 1.0429244 8.6097177 5.4074751 -1.2789336 3.0429069 9.9539949 10.5890253 10.2173290 11.0034838 10.2917790 11.2939115 3.3059413 12.1065673 13.8298256 9.2992811 10.4035258 11.8489688 10.9918538 3.6278636 3.1132838 8.1282424 11.8786372 NA 10.6051450 4.2128261 5.0785244 4.2755658 8.9181912 11.9194196 10.3889730 11.4127180 12.9165774 7.6546654 10.7944467 10.8418603 10.8605259 10.5331518 5.1639173 10.7339482 11.3361443 NA 10.3045275 9.7356924 3.6336288 4.6278636 12.3385568 9.9255457 10.7107238 10.9015053 7.7598935 9.7244924 12.7116103 10.5793441 10.1181143 10.1545599 0.00013863 0.00013863 0.00013863 0.00541390 -0.78522000 0.75299000 -0.00954260 0.00527490 -0.00968060 3.65690000 0.00889200 1.55930000 -0.01092200 0.00027766 -0.01147300 3.65690000 -0.78387000 0.76063000 0.74005000 -0.78808000 0.00000000 0.00138680 0.02146300 0.02146300 0.02146300 0.02244400 0.02244400 0.02244400 0.75775000 -0.75857000 0.00013863 -0.00539920 0.00541390 -0.00761010 0.04698400 -0.00954260 -0.00954260 0.00527490 -0.00968060 -0.00968060 0.02216400 -0.01003100 -0.01133500 -0.01615400 -0.01615400 -0.02111300 0.00110930 0.00027766 0.00027766 -0.01147300 -0.76775000 -0.79505000 0.00083195 0.76063000 0.74005000 0.74005000 -0.78808000 0.00000000 0.00138680 -0.80285000 0.02146300 0.02146300 -0.01009400 0.02244400 0.02244400 0.75775000 0.57380000 -0.77048000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.688 -0.777 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.688 -0.777 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 0.000 7.7039679 12.4258508 7.3430267 9.7032551 4.3038319 10.4708439 1.5283213 1.8909136 8.6020886 6.3208872 NA 7.7181540 1.0429244 10.1618437 9.7160349 5.1639173 9.6278651 9.8255732 7.7897527 10.4416462 9.3391490 8.0916618 9.7680985 2.0714881 10.9760030 9.4048463 2.4214253 -0.2791087 10.6104785 4.9689018 12.6997743 11.3042924 6.4074751 9.4412187 9.1946803 9.7018282 2.3059413 0.7209788 NA 1.0429244 10.5609656 8.6323664 9.3227452 3.1804025 7.7865251 7.3684331 11.0420570 4.4214118 9.6989699 NA 11.1602860 3.3648245 3.3059413 9.8037822 7.6922884 2.3059413 9.6028532 7.2640062 4.9689018 -0.2791087 13.9305040 -1.2789336 10.0417751 NA 8.6112388 5.8084365 8.1721855 7.5121376 16.432535 5.421415 9.873259 12.419896 9.811087 10.193665 12.995134 12.757320 8.838617 11.421197 12.391520 10.348508 8.128242 7.087296 1.042924 7.531546 11.509693 11.2245518 8.6472706 9.1014355 10.5279268 9.6729876 11.0526557 6.0608234 7.9712728 12.6892813 4.7433426 -0.2791087 9.0485272 7.8092061 9.1793812 10.0900265 9.3693321 9.0224707 12.0723279 5.2445370 12.6523076 10.2173290 10.8563632 9.5226829 8.0697027 9.7280018 11.1033283 8.3171643 NA 8.5140414 4.4214118 10.6051450 5.2287687 10.6494929 8.9181912 7.4254316 13.4124999 9.7924368 9.3942837 12.2556421 11.0049310 10.0000046 0.7209788 TCGA-E2-A15P 61 0 NA 595 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 2 2 NA 3 2 3 4 4 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 11.1952067 10.3249420 12.4085241 10.4262827 8.4104115 10.0084684 11.2265274 9.0622769 9.0541284 12.9068225 10.2471447 10.5963672 4.2182620 13.6472087 4.0376897 10.4127308 7.2471443 8.8940131 7.9219635 12.8212899 0.9381729 13.4320826 6.8688929 9.4869665 10.9314985 9.0965850 -0.8690691 8.8595717 12.4275019 2.5902427 7.3881887 7.2881481 0.1307991 5.0011672 10.7950258 9.9337209 10.7181095 10.8469771 9.7701414 12.5814321 -0.2841945 11.8077495 14.4885933 7.6809706 9.9325092 12.0850880 11.5139650 4.9381540 1.1307991 9.5876686 11.5629511 -0.8690691 10.5147750 3.8856915 4.8312388 4.3007241 9.9373504 11.6723814 10.3107099 11.9196210 13.1481312 7.8085202 10.7787089 11.0224952 11.2529817 11.6599872 5.6464997 12.5446931 11.1576700 -1.8693327 10.2674715 9.1989071 4.2611171 4.4345815 10.7829735 9.6543627 10.4501907 10.3323121 3.0376985 10.6027299 13.0441577 12.2195890 10.7227905 9.9609198 -0.62408000 0.00000000 0.00000000 0.00360760 0.00060040 0.00546690 0.00805670 0.00513590 -0.63415000 0.00708260 0.00708260 0.00708260 0.00388540 -0.63389000 0.00332990 -0.00221680 -0.00221680 -0.63859000 0.00176350 -0.62532000 -0.62131000 0.00000000 -0.01298900 -0.01298900 -0.01298900 -0.02903800 -0.02903800 -0.02903800 -0.00110870 -0.00788630 -0.62408000 -0.01285100 0.00360760 0.00546690 0.00833510 0.00329560 -0.00079353 0.00513590 -0.63415000 -0.63415000 0.00124810 0.00124810 0.00708260 0.00541390 0.00541390 0.00541390 -0.00391000 -0.63389000 -0.63389000 -0.00304750 -0.00221680 -0.63821000 -0.65219000 -0.63859000 0.00176350 0.00176350 -0.62532000 -0.63958000 0.00000000 -0.64321000 -0.01298900 -0.01298900 0.00958830 -0.64959000 -0.02903800 -0.00110870 0.00569190 -0.65221000 0.000 -0.634 0.000 0.000 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 -0.154 0.000 -0.634 0.000 0.000 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 -0.154 8.0644917 12.7093504 7.0674387 9.7501037 4.3787266 10.9010517 0.4527009 -1.8693327 8.1490007 7.5401916 0.4527009 7.8223701 2.3787336 10.3958297 9.5139650 2.1307991 9.0879027 9.7330357 12.8666212 10.9178871 10.4263717 8.6306468 10.3347604 2.6543668 9.8001287 9.3816913 3.9636868 2.3787336 10.4374321 3.3402489 11.7742060 12.3755362 7.8190512 10.2944504 9.0762446 9.0915266 3.7455063 NA 0.4527009 8.1462158 9.4756514 9.4040135 10.0788029 4.4162047 8.2636345 5.5820110 10.5236548 7.0256180 9.8616953 -1.8693327 11.9748199 1.9381729 4.9509816 9.9712758 7.1530017 4.4162047 9.1201954 8.2549218 6.9887812 -0.8690691 13.4818090 -0.8690691 10.1985713 -0.8690691 7.3082207 5.2703533 8.0331757 8.6747992 12.841069 4.938154 9.511803 13.647209 10.227186 10.615372 12.821290 13.219258 9.431153 10.666319 12.800073 9.648962 9.587669 8.298219 -1.869333 7.926840 10.966851 11.3849436 6.9445821 8.6660763 8.8688929 9.0286462 10.7628918 6.1080811 6.1587066 10.2471447 6.3353725 2.3007388 5.4345815 6.7446267 11.1018053 10.7662922 8.1152190 8.4138889 13.2695525 6.4208192 12.4590549 10.7181095 10.0003946 10.3313928 10.9733475 9.7422867 11.0187829 9.0466801 0.4527009 9.0815023 6.7082300 10.5147750 6.7710457 10.7098810 9.9373504 7.6385952 12.9998644 10.2732269 10.1290386 13.0233910 9.4402770 10.4388554 0.9381729 TCGA-E2-A15R 64 0 NA 1732 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 3 1 5 NA 3 5 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 9.710324e-07 3.121176e-07 11.1382120 10.2083424 11.6158101 10.0232379 8.5028604 8.0555720 10.2567055 8.6625352 10.1394192 13.2586511 10.9205924 10.5415014 0.7233401 12.9463000 4.2558708 8.2899737 6.8289095 8.5840192 4.7986623 13.1015157 3.8702167 14.2179099 1.2379308 9.6465801 11.7227718 9.7944550 NA 9.6435159 8.1816358 3.3422845 9.9415065 6.0087782 -0.4989940 3.7233729 10.0915704 10.0248719 10.8189611 11.7819473 9.3615530 12.4505061 2.5598833 10.1027540 14.4746508 8.6364789 10.3922582 12.8486508 11.6019741 3.2735756 7.2536424 8.8274129 9.9518509 NA 10.6885416 10.7356012 2.7739963 3.0859515 9.5924187 11.4158667 9.8285359 11.3766047 13.0764832 8.5316505 12.1459661 11.6092398 11.2407639 10.8406477 5.5159332 11.2891578 12.0656092 -1.0840585 9.9394286 9.7863855 4.5183085 3.2735756 9.9518509 9.3496063 10.6589617 11.0517301 2.5009805 9.4444749 10.8365598 10.2286202 10.4713289 8.6025215 0.82686000 0.82686000 -0.85837000 0.00000000 0.00000000 0.00041593 -0.00457070 0.00736090 -0.85908000 3.65690000 3.63530000 0.00346870 -0.85750000 0.01300500 1.53450000 3.65690000 -0.85821000 -0.00172450 -0.00172450 -0.85281000 -0.00479580 0.02104300 0.00402430 0.00402430 0.00402430 -0.02675800 -0.02675800 -0.00595220 0.73511000 -0.84387000 0.82686000 -0.00968060 0.00000000 0.00041593 0.00041593 -0.00457070 -0.00457070 0.00736090 -0.85908000 -0.87393000 0.38485000 0.80694000 -0.87408000 0.00944910 0.00944910 0.00944910 0.00944910 0.01300500 -0.85136000 1.50890000 -0.86334000 -0.85821000 -0.85821000 -0.00172450 -0.00172450 0.01684500 -0.85281000 0.01447000 0.01014600 -0.85588000 0.00402430 0.00402430 1.66750000 -0.02675800 -0.00595220 -0.00373950 -0.02257800 0.03228100 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 0.000 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 0.000 7.91178804 11.84453917 8.05301193 10.35429281 3.98210830 10.71124873 1.23793077 -2.08375268 8.69901887 9.48397696 -2.08375268 6.86672256 1.08596845 10.50941191 9.35637097 -0.49899405 5.98748232 9.07020603 7.14002296 10.28234296 9.34401444 8.02846031 9.98748317 2.37545654 9.19679169 9.42678491 5.64393986 -2.08375268 10.97011632 3.27357557 11.60787335 10.73340425 7.78175378 8.97062505 6.48587599 9.13276678 7.65242268 -0.08390558 0.23793077 7.09094656 9.99983247 7.73619964 10.37109107 2.67090830 9.82076071 7.56167898 10.52750672 9.12730078 9.70188187 -2.08375268 8.91742907 4.30833903 3.72337289 10.43409859 5.19929543 0.91601797 8.58046812 7.22208292 4.55987721 -1.08405849 12.99367105 -0.08390558 10.10800531 NA 5.98211058 4.14483768 8.03496179 8.35064885 15.078534 6.407874 9.731004 12.946300 9.126710 9.623380 13.101516 13.573590 8.472527 11.182807 12.569762 11.345820 8.827413 6.095931 -0.498994 6.887564 11.114619 11.329913 8.314764 9.445939 10.452996 9.920241 11.093495 5.219800 8.498163 10.920592 6.070838 2.308332 4.588445 7.751250 10.198820 9.885047 10.349309 9.684619 11.686581 2.308332 10.118380 10.818961 10.821408 9.204887 11.677676 8.805525 10.898123 9.075261 4.574235 8.458888 3.237946 10.688542 6.447402 11.136399 9.592419 7.752150 13.650068 9.194470 9.159195 12.069335 9.203156 10.051089 0.501006 TCGA-E2-A15S 34 0 NA 428 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 1 1 NA 3 5 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 3.81477e-07 10.3305883 9.6092172 11.3622937 9.7878510 9.7352791 8.1706161 10.1426302 9.7235499 9.5905049 15.0092918 11.8696155 10.5048740 2.1088255 12.9149600 2.9023824 8.7972069 6.5726366 8.3273631 5.3516955 13.8851634 2.3718655 13.8200769 1.9023824 9.2429514 11.5067286 8.9434165 -1.7978644 6.8637279 9.7555788 3.0599263 9.1451970 5.3516955 0.2020102 3.5595040 9.9547483 10.4622810 9.1451970 8.6006931 9.2551967 11.3317155 3.1088422 10.9738516 14.1175021 9.7632947 11.3613478 11.0916436 11.6271654 4.9568373 9.6822348 8.8331266 9.5250043 NA 10.8541222 8.0937334 3.4113991 3.9023920 9.3862050 12.0897413 10.8480581 9.9746764 12.7969738 8.8690611 11.0901219 10.8541222 10.7734651 10.6234884 5.0845916 12.8029658 13.0872645 0.2020102 10.5693642 9.1877915 4.9707938 3.0093113 10.0253168 9.7027914 11.6696824 10.0769309 2.5238881 8.0937334 10.1459293 10.0193329 10.8189577 9.6108099 -0.78100000 0.02918400 0.01306300 0.42587000 0.01209700 0.01321300 0.84692000 0.81220000 0.01363200 1.29460000 0.37924000 1.94990000 0.83616000 0.40632000 0.37611000 0.04032600 0.04032600 0.39579000 0.39579000 -0.79945000 0.03538300 -0.00304750 -0.74690000 0.05281000 0.85997000 -0.72676000 -0.34198000 0.40811000 1.34340000 -0.77065000 -0.78100000 -0.76522000 -0.00013862 0.01321300 -0.38829000 -0.01312700 -0.01821600 0.81220000 0.01363200 -0.79058000 -0.37426000 -0.05980700 -0.80712000 -0.78875000 -0.78875000 0.05965100 -0.52532000 0.40632000 -0.80078000 0.01140000 0.04032600 -0.79886000 -0.79886000 0.39579000 0.39579000 0.39579000 -0.59341000 0.02490400 -0.00304750 -0.78606000 -0.78235000 0.05281000 0.02525000 -0.72676000 -0.32785000 -1.29290000 -0.05401600 0.06537000 -0.354 0.053 0.000 0.000 0.396 0.396 -0.593 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.727 -0.342 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 -0.156 -0.354 0.053 0.000 0.000 0.396 0.396 -0.593 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.727 -0.342 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 -0.156 6.7603700 10.5323062 1.2019475 10.1852994 2.3262785 12.8434933 0.2020102 -1.7978644 8.9534934 7.5261299 0.2020102 6.7412634 2.0093113 10.4731206 9.1050783 6.4919685 5.7097428 9.3542344 7.7137020 10.2643329 10.4366742 8.9676499 9.9041222 -1.7978644 8.1517761 9.6124008 2.3718655 1.2019475 10.8230856 2.2019475 11.5519218 11.1715159 6.2463435 9.3072033 6.8565861 9.2720703 6.4114025 4.2463473 -0.2130691 6.6776830 7.7411083 8.9890359 11.4028481 4.4687332 8.9962678 7.9568367 9.6715913 6.3818578 11.2555360 -1.7978644 8.1619517 2.7255012 5.0845916 9.8056360 3.7426638 1.2019475 7.3260708 7.6531604 6.3260717 NA 14.0249684 0.7869309 10.3453327 NA 7.7294263 6.1906346 7.9996111 7.9684785 14.694694 6.636578 8.384344 12.914960 9.641780 10.101306 13.885163 12.688659 9.700300 11.162313 12.140059 11.199305 8.833127 7.860161 3.902392 8.491969 12.095915 11.471661 9.501907 8.069228 10.698554 9.934541 10.243383 3.108842 9.168455 11.869615 6.246343 -1.797864 8.799071 8.655477 9.858821 10.726981 8.534993 8.960173 11.875038 2.009311 12.777575 9.145197 10.199835 10.301955 11.186190 8.978382 11.186190 8.953493 4.970136 8.279673 3.411399 10.854122 4.179232 11.085547 9.386205 6.705775 12.888559 9.523878 9.452840 11.733940 9.367485 9.733818 2.371865 TCGA-E2-A15T 65 0 NA 1563 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 3 5 1 1 4 1 1 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.81477e-07 11.07019200 10.27034252 12.63920982 10.51635935 9.10636010 9.07900549 11.15321532 10.50488104 8.57894399 12.98584037 12.35458998 9.32110755 -0.08758006 13.32873775 3.81931053 7.73260297 5.24632447 8.52713369 8.76625326 14.10088407 4.18544636 14.56345701 5.51728514 8.64905135 11.52744050 8.40694647 NA 6.27582839 9.13963883 NA 7.11536416 5.21010438 NA 4.21010828 10.28093046 10.01702273 9.38477641 10.23322456 10.74900045 12.07439565 13.24366755 11.10224856 13.94599040 9.74784287 10.88612134 11.27710586 12.55522785 4.75372754 2.57538495 9.54420735 10.00650169 -0.67254257 10.54451040 5.23435186 3.64938553 4.30474466 10.81605485 11.99079723 9.94630583 11.40477798 13.29931936 8.11862448 11.36929176 11.05250821 11.06238275 11.64798005 5.81127835 12.42820598 11.51078671 -1.67254257 10.05750700 9.28165792 2.72115389 4.10881715 9.69323708 10.53172698 11.00297756 10.73340070 2.02789715 10.04170706 11.66313101 9.83178400 10.59950805 9.44185464 -0.0059522 0.8532500 -0.0548580 -0.0089906 -0.0089906 -0.0056757 0.0030522 0.0140510 -0.0204120 1.7417000 0.0351000 0.8001400 0.0262330 0.0262330 0.0155870 1.7184000 -0.8168800 0.0054139 0.0054139 -0.0067813 0.0053731 0.0263730 -0.7997000 0.8172700 0.8172700 0.0373590 0.0373590 0.0373590 0.0393370 0.0454240 -0.0059522 -0.0132190 -0.0089906 -0.0056757 0.8145400 -0.0048214 -0.0099398 0.0140510 -0.0204120 0.0183830 0.0000000 0.0000000 0.8603700 0.0122370 0.0122370 0.0122370 0.0589370 0.0262330 0.0262330 0.0155870 -0.8101300 -0.8339700 -0.8339700 0.0054139 0.0054139 0.0054139 -0.0067813 0.0109820 0.0217840 -0.8241700 -0.7997000 0.8172700 0.0140510 0.0373590 0.0373590 0.0393370 0.0244080 -0.8354400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 0.000 7.55627996 11.39992910 8.27436790 9.34496583 2.39182270 11.14444514 0.91241994 -1.67254257 8.26409960 6.50238789 -1.67254257 8.48859333 1.91241994 10.54269112 9.19628417 3.45674045 7.44640264 9.42021858 11.62738496 9.96045669 9.60452803 8.29324586 10.74663171 0.91241994 9.36569472 9.21010462 2.23434803 -1.67254257 10.92714194 2.02789715 11.42005348 12.12684432 7.24334062 10.55958263 5.75372754 9.01308646 1.49738244 1.91241994 -0.08758006 5.34982878 9.46317081 8.61978310 9.50425808 3.18543843 9.82722265 6.21010438 9.72620521 4.70250241 10.46509312 NA 10.55327141 0.91241994 4.08234494 9.67998495 6.93019800 4.45674702 9.53995789 6.87049295 7.38545347 -0.08758006 13.31694471 -0.67254257 10.06217110 NA 8.31756547 4.68501505 7.88396776 8.79710347 15.8163899 5.7024996 8.7672923 13.3287377 9.9208526 9.3773101 14.1008841 13.4721994 8.6174803 11.3935507 13.5372575 11.0543183 9.5442074 8.6105498 0.6493855 8.4810135 12.1187262 11.3059933 6.5610817 9.1444451 9.5562801 10.1010129 10.7511001 4.5369170 4.3718585 12.3545900 3.7868891 0.9124199 8.8062312 6.9559800 9.2743677 9.5179036 9.4873328 8.9114846 12.0853723 4.2343557 11.3899276 9.3847764 10.3425281 8.8675895 12.0899474 9.1380332 10.8791698 9.2990051 -0.6725426 8.0831001 5.5369139 10.5445104 5.1476405 10.8082517 10.8160548 7.5320325 13.2958133 10.2585684 9.2925243 13.2016264 10.2343521 9.8753201 0.3274574 TCGA-E2-A1AZ 63 0 NA 2329 breast stage iib t2 n1a m0 female 2004 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 4 4 4 5 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 5.201959e-07 9.9862027 10.2814213 11.8544499 10.0671227 8.5909478 8.6541015 8.4526020 10.9598193 9.2978503 12.5552493 10.7892829 10.5909478 0.5853472 12.1157295 1.1703097 7.8891042 8.3335159 9.4339461 7.9819280 5.4182136 1.1703097 9.2822908 7.1010228 9.3047120 10.3267902 4.6727874 0.5853472 8.8660941 11.2014125 3.6727874 8.7376080 8.0811782 10.4526019 4.8332494 9.8947996 12.1660529 10.0157758 10.7905055 10.1636960 12.0385939 2.9072560 7.7947765 14.0823018 9.0537437 8.5131010 11.4308133 11.5690294 4.4922121 -0.4146528 9.4725438 11.5086507 NA 11.7987313 6.1702856 7.7451943 5.5395187 10.3174906 12.2062303 10.1917285 12.0010650 12.4788144 7.0691393 11.4506698 10.9917409 11.5835611 11.6754356 6.2000335 11.6429766 7.8189432 -0.4146528 10.4213735 10.2639234 3.7584524 6.1244812 11.4782454 10.6180577 10.7689586 10.4672019 2.7552508 9.1627521 12.5093934 13.2787013 10.4331635 9.5597379 1.1578000 1.3422000 0.1213800 0.1757300 -0.1983700 -0.0018014 0.2526100 -0.1848400 -0.1960000 0.4992600 0.4992600 1.2937000 0.4849200 0.5285100 -0.2234600 0.1798000 0.1798000 3.1124000 -0.2048600 -0.2483300 -0.1947500 -0.5961800 -0.1840800 -0.1840800 -0.1885200 -0.1474700 1.9239000 0.1949700 0.1841000 0.2432600 -0.1677500 -0.6301700 -0.6002200 -0.1580900 0.0000000 -0.2118100 -0.6080600 -0.1848400 -0.2019500 -0.2443600 -0.2118100 0.3334800 -0.3492700 0.8309600 0.8309600 -0.2173800 -0.1640800 0.5285100 0.6016000 -0.5869600 0.1798000 0.1710600 0.1621400 0.7775300 -0.2062200 -0.2368000 -0.2077200 -0.1980000 -0.6494300 0.2056400 -0.1840800 -0.1840800 0.1450700 -0.5493500 0.1949700 0.1718100 0.1665500 -0.5998300 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.604 -0.604 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 0.000 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.604 -0.604 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 0.000 9.2788102 13.2327816 6.0771768 9.2110322 4.7552508 11.4729246 4.0447526 4.0447526 9.2363749 8.8117353 5.4182136 8.1211817 6.8982059 10.8741893 9.0771762 2.9072560 9.9690276 10.2064593 8.4464101 8.9004729 8.9488884 8.2146800 12.3954932 1.8956516 7.1399125 9.3683214 4.4433016 -0.4146528 10.4347283 2.5853231 13.3220422 13.2165003 8.6378913 9.5923505 11.3280537 9.5351500 5.2577499 2.9072560 1.9072368 1.1703097 8.2255680 9.8320639 6.7652324 4.9428757 7.2413902 5.9072512 10.0881550 6.2146805 9.4166306 1.5853472 10.4831686 3.3926746 6.0447547 10.5131605 5.7314086 6.6621385 8.7627428 8.6964588 7.4740661 5.6076913 13.3797391 -0.4146528 10.3089841 NA 10.8207392 4.1702856 8.8497657 7.2146795 10.073816 10.466437 8.654101 12.115730 10.407097 10.588841 5.418214 8.579676 9.433946 13.139432 13.679318 11.874766 9.472544 7.667472 4.044753 7.898206 10.580384 10.8845312 4.8332494 9.3166422 8.0115879 9.8225332 9.9032671 7.8567865 5.9603634 10.7892829 10.7984274 0.5853472 9.0508896 9.3621674 12.5119898 10.4710196 8.4118715 7.6187459 10.7113824 8.0731631 12.2851928 10.0157758 10.0569984 10.1254513 11.6121924 10.0911348 10.7583756 9.6846710 3.3926746 9.2887424 8.3132436 11.7987313 6.7248740 10.6807203 10.3174906 7.7402935 14.0249580 10.6194344 10.8597014 12.3288954 10.1128002 9.6378913 3.1702936 TCGA-E2-A1B0 50 0 NA 1631 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 6 3 5 5 2 4 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 4.161568e-07 10.4816158 11.2085427 11.6242026 10.0411904 8.8521362 9.3500947 10.3869694 11.2417739 11.0427150 14.1234249 9.8679886 10.6958763 2.5707786 16.8271511 3.6793112 9.2123860 5.0137302 8.5580499 6.0785799 12.1019844 NA 8.4496031 3.5707908 9.4170597 11.4042689 5.8699948 -2.4289543 8.8457463 11.3023169 1.6582343 8.8369867 8.8642573 -1.4293428 5.6845270 10.2553153 10.4463432 10.1987755 10.1634763 10.1857256 11.7359283 10.4612401 9.2991315 15.5749514 8.7668529 8.7000689 12.0616993 12.6294963 4.1854939 -1.4293428 9.1836542 12.2560821 -0.4291485 10.7843457 5.5191519 6.7256035 5.1176784 11.0210949 11.7060141 9.4955982 12.2168381 12.8880924 6.2502662 11.0857464 10.1978773 11.2745812 11.3922608 5.7306563 11.9337569 9.2087691 0.7407117 10.0343101 8.7612278 2.6637545 5.4836739 11.5580498 10.5446624 10.2790075 10.4801163 2.9283324 9.8454551 14.2553289 12.0091878 10.4690093 8.9161909 0.0794590 0.8443500 1.1502000 1.2323000 0.0093098 -0.1357400 1.6439000 0.6011100 0.2142200 1.7748000 3.6569000 3.6569000 -0.0720070 -0.0720070 -0.0102320 0.5988800 0.5988800 -0.0732090 -0.0732090 -0.0316190 -0.2587800 -0.0989480 -0.1277200 3.6569000 0.9295900 -0.0627640 -0.0627640 -0.0627640 0.3149800 0.0570830 0.0794590 0.0610790 -0.0452280 -0.1522100 -0.1377600 -0.2509200 -0.2354500 0.6011100 0.2142200 -0.1231700 0.1194200 -0.1332900 -0.1515700 0.0000000 0.0000000 0.0000000 0.0000000 -0.0720070 -0.0720070 -0.0579130 -0.0150540 0.6102900 0.6186100 -0.0732090 -0.0732090 -0.0732090 -0.0008316 0.0748400 -0.0498300 0.2805300 -0.1201700 -0.2477600 -0.0843950 -0.0062286 -0.0627640 0.3149800 0.6384700 0.2899200 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 0.144 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 0.144 8.5778129 13.3470132 6.3716861 8.8556098 3.5249789 10.8828178 1.7407117 6.7506949 8.7661578 9.0611352 NA 8.8531271 9.4948560 10.7649270 8.9022626 0.5707544 8.7826739 10.2500460 9.8219723 10.0225121 9.3611871 7.2378973 11.6635429 1.8187279 9.5165953 10.0985071 1.5708029 NA 9.4197999 1.8187279 13.0937657 12.6946647 7.9490808 9.9373812 8.2440950 9.1089747 2.6151809 2.4776773 -0.4291485 1.8927019 8.4678749 7.8079956 9.3426878 3.6368798 9.0787339 7.2987060 10.5459172 7.3989224 9.9520583 -0.8442508 12.3738069 3.6582458 3.6793112 9.9774000 6.6278301 6.7077774 9.2051430 7.9050590 7.2055968 3.5015283 13.3771592 0.8927407 10.7109764 0.5707544 10.5079757 4.2987096 8.6766944 8.2651438 11.233994 7.492626 8.860228 16.827151 10.047051 12.133267 12.101984 10.338350 9.750695 10.637043 13.184201 11.440765 9.183654 8.674074 2.963104 8.345573 13.249688 10.871567 6.755661 9.472407 8.348863 9.364389 9.380405 6.090422 6.308878 9.867989 5.615181 5.725605 8.915082 8.791920 13.455719 10.265796 9.358688 7.954490 10.328176 6.593154 10.593587 10.198776 9.891022 9.868848 11.275230 10.516961 10.767849 9.684528 2.658257 9.520430 7.514765 10.784346 7.467118 10.281226 11.021095 7.549496 13.845091 10.441728 10.049555 12.332908 10.548245 9.129207 3.125370 TCGA-E2-A1B1 45 0 NA 2653 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 2 4 2 2 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.387189e-07 11.01957405 10.79173546 11.79797366 9.85457685 9.66637581 9.36678686 10.23063930 10.72853900 9.18259224 14.50186598 11.04465750 11.09202345 2.65850856 14.62820586 3.65850856 9.28737833 6.56539763 9.12774238 8.85621572 12.53354013 2.21104335 12.89456163 4.98043666 8.75232110 10.63292215 6.56860068 -1.24845059 12.13660841 9.40804181 2.07354606 7.62506076 8.28883517 0.33662617 4.10916830 10.47698319 11.02103590 9.92591844 11.50931946 10.43439210 11.95190257 10.12339358 10.52743302 14.36039157 8.35302549 9.00132290 11.69961908 12.01260998 5.00900670 0.07354606 9.91620970 12.16200206 0.55895330 11.63931357 8.20899807 7.77120751 5.36632571 10.59651889 11.97990959 10.01253655 12.62650229 13.29941525 6.69413080 11.44030438 11.13245815 11.88459861 11.69980168 5.34407571 12.05261295 11.27774937 4.64643343 9.92747828 9.42669184 3.50676695 6.60648516 10.37915090 10.74118887 9.74384715 10.31528997 2.14394845 10.46478863 13.77335607 13.03119128 9.57378937 9.12448194 -0.0011087 -0.0011087 0.0026357 0.0000000 0.0000000 -0.0020524 0.0000000 -0.0317680 -0.0317680 0.0210430 0.0210430 0.0210430 0.0189430 0.0189430 -0.0015114 -0.0015114 0.0134920 -0.0031859 -0.0031859 0.0800330 -0.0040162 0.0066653 -0.1741100 2.0119000 1.1462000 0.9024600 -0.0227440 -0.0227440 0.0575110 -0.0011087 -0.0011087 -0.0061669 0.0000000 -0.0020524 0.0037465 0.0000000 0.0000000 -0.0317680 -0.0317680 -0.0317680 -0.0019399 -0.0032142 0.0210430 -0.0052610 -0.0052610 -0.0052610 -0.0052610 0.0189430 0.0189430 -0.0015114 -0.0015114 0.0134920 0.0134920 -0.0031859 -0.0031859 -0.0135990 0.0463560 -0.0040162 0.0066653 0.0107030 -0.1741100 -0.2355700 0.0174110 -0.2031100 -0.0227440 0.0575110 -0.0094046 -0.2625200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.60492660 13.10703689 8.35431595 9.55049381 5.06468026 10.55615137 2.21104335 2.55897778 7.98763125 9.34454115 1.07354606 8.81842592 3.75161368 10.40826530 10.70126132 2.14394845 10.94236759 10.28372932 9.52681572 8.50232384 9.52071924 8.09035329 10.75548616 2.79601624 9.39412009 9.34267185 5.03701755 NA 11.30848221 4.10916830 12.69527645 12.01737850 8.92841356 10.54867050 11.42426331 8.59396734 5.06449920 1.55895330 1.45206823 3.63425637 8.48547956 8.30908067 10.46757896 6.73461073 7.08778847 4.81770511 9.93835020 7.16524469 10.15622633 0.07354606 11.21526907 3.60960132 4.74030157 9.66898530 4.80113796 6.19455989 9.28932061 9.16100789 8.68235418 0.55895330 13.72683801 0.55895330 10.65700397 -1.24845059 9.33798777 6.00428340 8.52722715 8.69486453 13.0709769 6.6250615 8.8337661 14.6282059 11.3291638 10.1880683 12.5335401 11.2706388 8.9834383 11.3601917 13.5623392 11.1235297 9.9162097 8.5670004 -0.2484506 9.2354327 11.0997919 11.057679 5.366326 9.178406 8.230387 8.471006 10.232745 6.990022 6.992408 11.044657 5.402668 4.126659 5.143936 7.268479 12.635501 10.618896 8.711619 8.455520 11.660572 7.576576 11.567748 9.925918 10.676801 9.019574 11.284095 9.674944 10.585298 9.837421 NA 9.292317 7.001916 11.639314 8.653992 10.616770 10.596519 7.137479 13.984394 10.560380 10.640931 13.335963 9.587273 9.730327 3.558978 TCGA-E2-A1B4 74 1 1004 911 breast stage iiia t1c n2a m0 female 2008 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 5 5 2 3 3 1 1 1 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 10.45913034 8.63227294 10.93348412 7.31657841 9.06284513 9.03839201 10.13482968 9.17001517 9.96778521 12.97949654 10.88972974 10.20952550 0.08052123 13.41270604 2.16803223 9.87863125 7.33559312 8.77666266 9.78576500 13.46737013 3.08057240 14.62175196 6.49841683 10.56282797 10.45097954 4.55630065 -1.91920592 7.47930818 8.64566672 0.40250390 8.97538228 5.73161501 NA 2.32849183 8.72080960 9.53743236 10.82245285 11.26559483 9.49419257 10.68395913 10.17596153 11.29382073 14.10518484 6.57462077 10.02381200 11.25174134 10.62528757 4.14665522 6.83210898 8.11398746 11.68187110 -1.91920592 10.82623886 8.40136509 4.42041503 2.88791514 9.76487491 12.06987036 10.54306682 11.85802538 12.77056254 8.57542012 10.65775736 10.30787964 10.80763410 10.86233407 3.29001147 10.98651561 11.35727059 NA 10.38463062 8.30094279 3.69821848 1.98746640 10.73989155 9.89354408 9.98670360 8.77753215 2.08055534 9.90989083 12.07792051 12.52292495 9.62069252 10.14058491 5.4139e-03 4.9739e-03 -3.7598e-03 -6.9344e-04 -8.0549e-03 -1.0646e-02 8.2686e-01 2.2193e-03 -8.7982e-03 -3.7395e-03 -3.7395e-03 -3.7395e-03 -2.0173e-03 6.3871e-03 4.3817e-06 4.3817e-06 4.3817e-06 8.7528e-03 1.0286e-03 -8.8526e-03 1.2695e-03 1.0842e-02 1.8103e-02 1.8103e-02 1.8103e-02 2.3286e-02 2.3286e-02 1.4769e-02 1.4470e-02 5.4139e-03 5.4139e-03 -4.4312e-03 -6.9344e-04 -1.0646e-02 -1.0646e-02 -4.8461e-03 -4.8461e-03 2.2193e-03 -8.7982e-03 -8.7982e-03 0.0000e+00 0.0000e+00 -3.7395e-03 -7.8863e-03 7.6392e-03 7.6392e-03 7.6392e-03 6.3871e-03 6.3871e-03 4.3817e-06 4.3817e-06 8.6135e-03 8.6135e-03 8.7528e-03 1.0286e-03 1.0286e-03 -8.8526e-03 1.2695e-03 1.0842e-02 -7.9267e-01 1.8103e-02 1.8103e-02 1.9418e-03 2.3286e-02 1.8484e-02 1.4470e-02 6.2481e-03 2.7076e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.68604383 12.51786150 3.91345433 10.06177512 NA 11.44045135 -0.33442531 0.08052123 8.91898068 7.75828452 0.40250390 5.29001885 -0.33442531 10.11157650 9.44305646 0.88791514 6.73161637 8.43150387 11.32224985 11.21739553 9.63045990 6.97840959 10.15403669 2.08055534 8.85946304 10.01314845 4.08056387 0.66548373 10.58314775 2.40250390 13.66631935 12.35457866 7.01130218 10.63970265 7.49630655 9.76443640 4.20985103 -1.91920592 NA 1.25047655 9.70444613 11.02032738 9.89314299 0.40250390 8.83193296 6.55629759 10.52065512 4.69527563 9.49841703 NA 10.51857664 1.66552921 4.25049171 10.00795372 6.84138445 0.08052123 8.65515824 5.55629759 5.28023627 -0.91947877 14.43663821 NA 10.14058491 -1.91920592 8.64280697 6.13041406 7.72261630 8.11811154 12.8406446 2.9874482 9.1297325 13.4127060 10.6289049 10.7414518 13.4673701 12.4236114 8.9959661 9.7714357 12.5774807 9.5749202 8.1139875 8.9524699 0.6654837 7.9904574 10.8871142 10.620208 6.774052 8.754757 9.179255 6.544090 10.257872 5.619724 6.544090 10.889730 7.212421 3.572417 7.189089 4.369292 9.297917 10.119826 6.523509 9.324928 9.310585 3.604131 11.568894 10.822453 10.634194 10.480910 11.222193 8.658937 10.434538 7.590339 NA 9.693691 3.438120 10.826239 5.957081 11.204686 9.764875 6.468582 14.308970 10.473687 11.116910 12.631972 10.966070 9.711742 1.987466 TCGA-E2-A1B5 46 0 NA 984 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 4 4 2 4 2 4 3 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 10.6886421 9.4910319 11.2351674 8.0662636 8.8242110 9.6466244 8.6740181 10.2463630 9.5765807 10.0873587 11.1695850 10.6280685 NA 10.6385356 3.6296247 10.0118380 4.6542866 8.5315312 9.6218299 12.1300195 NA 12.0473311 3.7716426 9.9713153 9.6139935 5.8801663 NA 12.5498229 11.4157247 -0.2283679 7.8617557 6.9060692 NA 4.4720848 9.2544509 10.0040640 9.2654985 10.5381720 9.4493627 10.5977943 -0.2283679 10.0442728 14.1001427 7.9045028 9.0396001 10.4910318 10.1889682 4.8591049 NA 8.4100790 11.2915250 NA 11.1382385 7.2952051 8.4563918 4.6542866 10.1952842 12.1116322 10.3537850 11.5848230 12.5796016 6.2794379 10.8163787 10.3589518 10.9817056 10.5464301 3.5789991 11.6039397 8.4944504 -1.2283679 10.4360903 8.8457845 3.4720848 7.1510216 10.9198018 10.1319414 10.2709907 10.2669985 2.4720718 7.4298544 12.7643159 12.6457599 9.2443339 9.6132075 0.03115500 0.03115500 0.19984000 -0.03408600 -0.03408600 -0.00193990 0.47255000 -0.00360110 -0.00360110 -0.16039000 -0.16039000 0.16355000 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00664320 -0.02821800 0.45428000 -0.01326400 -0.00374730 0.00166420 -0.12304000 -0.12304000 1.08510000 0.00263570 0.00263570 0.00263570 0.02651400 0.03115500 0.03115500 -0.00027724 -0.03408600 -0.00193990 0.08608800 0.30409000 0.30409000 -0.00360110 -0.00360110 -0.00360110 0.10687000 -0.00526100 -0.17820000 0.09405600 0.09405600 0.09405600 0.09405600 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00664320 -0.17301000 -0.02821800 -0.17132000 0.24062000 -0.01326400 0.00624810 0.00166420 -0.17348000 -0.12304000 -0.12304000 0.00041593 0.00263570 0.00263570 0.02651400 0.02904400 -0.10802000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 0.000 11.5761774 10.9759085 4.8377314 9.0207564 8.0685590 9.7786704 6.3185374 -0.2283679 8.9009260 8.4755466 -1.2283679 7.8133021 5.0195685 10.3537850 9.2804281 -1.2283679 10.6800357 9.0278518 8.4616411 10.2584781 9.5738039 7.2310743 11.5626024 2.6444793 7.9239276 10.0171958 3.8591049 NA 12.1103794 4.4995653 13.8962491 12.8096189 8.7546367 10.3252724 9.8269255 9.3395991 1.9415571 2.2310637 0.7716321 1.0935602 8.4369788 10.0148171 9.6132075 6.4858889 4.4381132 5.6420084 10.1591219 5.4298536 9.0454386 0.3565946 10.6706223 2.5789870 6.9365496 9.4786916 6.9248909 8.0822560 10.8732905 8.7981665 10.6638063 NA 14.7147073 1.9415571 10.3161246 NA 8.9749910 6.5265305 8.1181567 8.6218299 11.595205 5.794010 9.508890 10.638536 10.987479 10.930568 12.130020 11.981858 9.261491 10.683784 13.568392 10.163960 8.410079 9.337697 -1.228368 9.384512 11.119541 10.606509 5.093573 9.284383 8.886687 6.629625 10.061599 8.966400 8.601366 11.169585 6.519836 NA 4.654287 6.314521 10.288820 11.489534 7.746057 9.683784 10.378973 9.131393 10.912300 9.265499 11.217692 9.822852 9.913112 9.588627 10.554232 7.620266 NA 9.498083 9.465130 11.138238 5.295205 11.330559 10.195284 6.971316 14.939100 10.839413 10.925512 11.925828 10.258981 9.461641 2.578987 TCGA-E2-A1B6 44 0 NA 867 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 8 2 2 4 2 3 2 5 1 6 2 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.774378e-07 3.467973e-08 10.503412 8.562927 10.816533 6.236738 9.682523 9.634734 8.252655 10.291955 10.627224 11.125300 11.515118 10.459510 2.157788 11.525528 2.420833 9.462935 7.357458 9.054421 8.313615 5.885706 NA 10.104984 6.472481 10.414702 10.137068 6.993204 2.835863 12.908283 11.037369 1.835843 8.986239 6.931254 NA 4.778372 8.628647 9.432979 9.102644 10.035530 8.933231 10.321938 4.754722 7.382752 13.990972 6.481983 10.127891 10.706029 9.969642 4.083784 -1.164238 8.695392 11.288227 NA 9.980516 5.795860 8.079031 4.420819 9.599070 11.915759 9.971246 11.640795 12.944096 6.983062 10.126164 9.831639 10.384679 10.327961 1.536302 11.958038 8.532825 6.931254 10.210354 9.636353 3.693844 6.307532 10.785866 10.438788 10.727451 9.961594 8.582372 7.260024 12.496689 12.184516 9.520606 9.916009 -0.0111170 -0.0352930 0.0623060 0.0305010 0.0305010 0.0114810 -0.1034800 0.0186050 0.0000000 0.1522700 0.1522700 0.1522700 -0.0164860 -0.0164860 0.0473510 0.0473510 0.0473510 -0.0326440 -0.0326440 0.0060511 -0.0972870 0.0258930 -0.0298630 -0.0298630 0.0523240 0.0176250 0.0176250 0.0176250 0.0287040 -0.0111170 -0.0352930 -0.0431160 0.0305010 0.0047930 -0.1075600 -0.1034800 -0.0992640 0.0186050 0.0000000 0.0000000 0.0184650 0.0184650 0.1522700 -0.0108410 -0.0108410 -0.0108410 -0.0108410 -0.0164860 -0.0164860 0.0473510 0.0473510 0.0473510 0.0473510 -0.0326440 -0.0326440 -0.0326440 0.0060511 -0.0972870 -0.1006300 0.0319410 -0.1068400 -0.0298630 -0.0421660 0.0176250 0.0176250 0.0084243 0.0229470 0.0260340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 0.000 11.3602766 11.4177640 1.0057593 8.5135768 6.5840500 11.1844472 8.8816169 1.7427392 9.5432165 8.6359484 1.2953116 8.0956006 3.6938438 11.0628716 9.7621533 1.8358432 9.5769030 9.7284001 7.1166278 10.0643755 8.6891122 6.7306753 10.8100926 1.4208327 8.2891281 10.4454979 3.3277161 0.4208327 11.1740366 3.1212641 14.2068342 12.1736883 6.3904459 9.6663726 13.0036675 10.4754242 2.4208327 2.8358635 0.4208327 7.3176568 9.3589292 10.4799390 7.2683988 6.1258763 8.4689616 6.4095046 10.3143742 6.3788896 11.2032721 1.6432097 11.5798502 2.4797221 4.4357686 10.1239880 5.8068267 9.2021797 9.2610733 8.9976190 10.0001358 3.5082765 13.8559041 1.0057593 11.1252999 NA 9.0730672 4.7900526 7.9535004 7.0932454 13.088969 8.350572 9.253183 11.525528 11.155953 11.699753 5.885706 10.270746 9.394924 10.687997 13.073105 10.241797 8.695392 9.209810 2.083792 8.504742 9.887746 9.639988 3.742750 8.248427 9.064075 8.052603 9.039126 9.753602 8.612291 11.515118 7.424572 8.762153 6.580691 9.058731 10.203818 11.509608 7.940456 10.119814 4.450565 9.605282 11.943159 9.102644 10.846385 10.342165 9.905978 8.872031 10.131052 7.415173 NA 10.460915 10.654639 9.980516 3.790053 10.903796 9.599070 7.918592 14.221197 10.813495 11.602697 11.725076 11.011719 8.956743 4.693838 TCGA-E2-A1BC 63 0 NA 501 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 NA NA 8 2 2 3 3 2 1 4 2 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.427581e-07 11.1896516 10.4773702 11.7954288 9.6756399 8.1004679 9.5844005 10.8542708 9.4901942 9.6501549 13.2561514 10.9054313 10.6014916 2.9919345 13.1322620 4.0623290 9.5723904 4.8794705 8.6242117 10.5526584 13.1300872 -0.3300662 12.9872866 4.5279961 8.7915487 10.9078229 10.0120900 NA 7.4047252 10.7239413 0.6700245 8.1974924 8.0666199 -0.3300662 3.9919435 10.3512538 11.2231646 9.1778099 12.4670689 8.7941367 11.5503642 -0.3300662 10.4829949 14.6731379 8.4284720 9.9167559 11.2703929 10.8330360 4.2549795 2.8399394 9.4282385 11.7411425 NA 11.8988341 8.3565158 4.5769030 4.6242120 10.6472953 11.5911124 10.0120900 12.5830917 13.3406716 7.0962798 11.0978519 10.8653691 11.6961930 11.3349070 5.7144104 12.8350794 10.1046436 NA 10.3219639 9.0708948 3.4835449 4.6242120 10.1191639 10.3902596 9.7561516 10.5526584 2.8399394 8.5403799 13.2378526 13.3721880 10.1304712 8.9783544 0.0016198 0.0016198 0.0016198 0.0102850 0.0098242 -0.0796090 -0.5759500 0.0126550 -0.5121800 -0.5333800 -0.5333800 0.0040243 -0.0567120 -0.0567120 0.5079400 0.0012481 0.0012481 0.0023581 0.0023581 0.0088920 0.0043021 -0.0053992 -0.5418900 -0.0169790 -0.0169790 -0.0216470 -0.0216470 -0.0216470 -0.0120240 -0.0064486 0.0016198 -0.0066956 0.0098242 -0.0930060 -0.0796090 0.0125680 0.0125680 0.0126550 -0.5121800 -0.5381900 0.0031910 -0.5251200 -0.5556700 -0.0065050 -0.0065050 -0.0065050 -0.0065050 -0.0567120 -0.0611520 0.5079400 -0.5463300 0.0012481 0.0012481 0.0023581 0.0023581 0.0023581 0.0088920 0.0043021 -0.0053992 -0.5801500 -0.5418900 -0.0169790 0.0372170 -0.0216470 -0.0216470 -0.0120240 -0.0058140 -0.0118870 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 8.5557119 13.6465795 8.2920671 9.7876584 1.4227712 10.2540383 2.2549870 1.2549568 7.3911147 8.5587586 NA 9.1036007 5.1294479 10.5595193 9.4097959 0.6700245 8.5029054 9.4530136 11.2750318 10.5131513 9.3378366 8.2993720 11.2559168 1.6700245 8.3282270 9.6357995 2.8399394 NA 10.2417680 2.6700245 13.1420715 10.9559954 8.3389004 9.7441569 7.8349223 8.9461398 5.8399394 NA NA 4.7992998 8.5708822 8.6444299 10.5287735 8.0751566 7.8480326 5.0623333 9.5678608 6.8399407 9.2828839 0.6700245 11.4410921 4.6700132 4.7992998 8.9239339 5.5255083 4.1294479 8.6671949 8.4348871 5.7992972 NA 13.7528297 NA 9.9919434 NA 8.9554174 5.5526599 8.3704551 7.9874277 12.564649 4.062329 9.005406 13.132262 10.782455 10.580658 13.130087 12.601861 9.211112 11.117099 13.368069 9.858604 9.428239 9.322860 NA 8.031959 11.359577 11.0650138 7.9274035 9.3102604 8.9986903 7.3494953 10.7209388 5.7144104 8.2624726 10.9054313 5.7361042 4.9179425 2.8399394 4.3715658 10.8903936 10.3503749 8.9737961 8.5495987 12.3255461 5.3424410 11.4726367 9.1778099 10.4140082 8.6812426 10.8548907 9.4709153 10.3521322 9.6909953 -0.3300662 9.2369637 5.2847251 11.8988341 7.3842605 10.1708572 10.6472953 7.6756402 13.7885509 10.1817680 10.8330360 12.7601278 9.8424429 9.7495001 3.4773665 TCGA-E2-A1BD 53 0 NA 1133 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 5 5 3 3 3 1 1 4 2 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 9.7788328 9.2158120 11.6973305 7.7115809 8.7609521 9.3000031 10.3383635 9.3768228 9.6185868 13.2417916 8.9519226 10.5152196 4.3844505 12.5672308 2.1793200 9.4414281 7.6765199 8.1755710 11.1076048 13.0534179 2.5329652 13.7796332 5.7709585 10.7331523 11.1924231 5.8797719 -0.4056425 12.5708154 8.7792459 0.5943575 8.5427378 7.0094076 NA 5.2382251 9.1159712 9.8689429 9.7292248 11.4407751 9.7146086 11.0541438 8.4881776 12.5734981 14.2993730 8.7517091 9.9541202 11.2607426 10.6615809 6.4187988 6.3131896 8.3941917 11.6283671 NA 10.5709348 4.9401433 4.0094099 3.5329652 10.6337467 11.9796938 11.3923023 12.0452382 12.5327863 8.8263918 10.6722990 10.1626783 11.2046265 10.9189262 3.7098530 12.2367984 11.5343171 -1.9907962 10.6880083 8.6613566 4.5146651 4.0538064 11.3242746 10.6453529 10.0858897 9.8327753 1.9162855 9.5505048 13.5474455 13.1786677 10.6948140 10.2206881 0.8419900 1.5998000 1.5990000 0.0775890 0.0616510 -0.2113200 0.3556100 -0.3014500 -0.3086100 0.3508200 0.3508200 0.3734700 -0.0156040 -0.0156040 -0.3011000 -0.3011000 -0.3011000 -0.1082800 -0.1082800 0.3194800 -0.6726000 -0.3787600 0.0218840 0.0218840 0.0218840 0.0745520 0.0745520 0.0745520 0.2174500 -0.0229840 -0.0407520 -0.1455400 0.0616510 -0.1961200 -0.2181100 0.3556100 0.3556100 -0.3014500 -0.3086100 -0.3086100 0.3244700 0.3244700 0.3508200 0.3283400 0.3283400 0.3283400 0.3246300 -0.0156040 -0.0156040 -0.3011000 -0.3011000 -0.3011000 -0.3011000 -0.1082800 -0.1082800 -0.1082800 0.3194800 0.0300290 -0.3787600 -0.7096200 0.0218840 0.0218840 -0.2225600 0.0745520 0.0745520 0.1999700 0.0048579 -0.6945100 0.000 0.000 -0.301 -0.301 -0.108 -0.108 0.319 0.000 -0.379 0.475 -0.685 0.000 0.000 -0.223 -0.223 0.000 0.000 0.000 1.592 0.200 0.200 0.000 -0.669 -0.146 -0.146 0.000 0.000 -0.211 -0.211 0.356 0.356 -0.309 -0.309 0.324 0.324 0.351 0.351 0.278 0.278 0.000 0.000 0.000 0.000 -0.301 -0.301 -0.108 -0.108 0.319 0.000 -0.379 0.475 -0.685 0.000 0.000 -0.223 -0.223 0.000 0.000 0.000 1.592 0.200 0.200 0.000 -0.669 -0.146 -0.146 0.000 0.000 -0.211 -0.211 0.356 0.356 -0.309 -0.309 0.324 0.324 0.351 0.351 0.278 0.278 0.000 0.000 8.2358204 12.4812738 7.6074605 9.6414945 1.8311071 10.7234389 -0.4056425 -0.9905095 9.1673865 8.7313618 1.9162855 7.8470360 1.4688439 9.9831055 9.5191831 1.7098641 7.5032637 9.2673853 10.0296936 11.1833975 9.1946739 7.2597065 11.6924027 2.0094188 9.3941919 9.6897676 2.9163047 NA 10.8539178 2.8673825 12.9696364 12.4947343 8.1008436 9.5082573 8.1805850 9.6658330 3.9401480 1.7098641 0.5943575 9.0606170 9.1862046 10.0289988 10.2100002 4.9162999 8.6136370 6.9072536 10.5842382 6.1231509 9.0551677 -1.9907962 10.8367509 1.4688439 5.0317745 10.0234844 7.7207655 1.7098641 9.9559489 7.0150325 4.9866885 0.8167226 14.2037802 0.3313613 9.9497217 0.3313613 8.5300266 6.2715022 7.8843897 8.8215855 11.430973 4.532971 8.195522 12.567231 10.878809 11.252731 13.053418 12.162089 8.984195 10.096871 13.060107 9.755083 8.394192 8.973027 3.366966 7.519183 11.149918 11.271062 7.672966 8.911029 9.067400 8.417738 10.772789 5.823189 7.161693 8.951923 6.946047 3.053806 8.568785 7.238107 10.323708 10.484635 8.692815 8.923045 10.489441 3.331333 11.767731 9.729225 11.034548 10.489693 10.728155 9.858422 11.215812 8.003761 -1.990796 9.010542 3.764293 10.570935 6.940146 11.092222 10.633747 7.245614 14.196857 10.162010 10.277658 12.570039 11.058065 10.194903 1.709864 TCGA-E2-A1IE 61 0 NA 2362 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 1 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 9.4651997 10.0701941 12.0802727 9.4651997 8.8776924 9.2746598 10.7646805 9.1409813 10.0003229 13.8918310 10.9113019 10.4457450 0.3169567 13.2234922 3.1649793 7.7195634 4.9019385 8.3481961 9.0027773 13.6625212 3.4544786 14.2473820 5.5107499 9.1243323 11.6218990 9.5346927 NA 7.5186115 9.5058133 2.0824982 8.1687263 6.6568267 NA 4.4213108 10.0742006 10.1463830 9.8738666 10.4299380 9.4379927 10.5807160 -0.4200475 11.0983370 14.3681863 8.6189856 11.3965928 10.7371481 10.9530581 3.9019385 5.7894658 9.6325798 10.1904214 -0.4200475 10.3412860 9.0577700 3.8776952 3.9257906 9.7755890 11.8744410 10.0010246 11.9149368 12.9222253 7.9049422 11.3162727 10.6854336 11.3881715 11.0210539 5.5800128 12.3735473 11.7377797 -2.0052031 10.1482846 8.9154020 3.6391974 3.3169711 10.3567189 10.6402573 10.8822699 9.9762597 1.6955039 9.0476172 11.1867254 10.0380766 10.2316615 8.9041923 -0.00747200 -0.00747200 0.00152550 0.00555290 0.63390000 -0.00221680 -0.00435570 0.00235810 3.65690000 3.65690000 3.09620000 0.00027728 0.00597000 -0.68857000 0.00666530 0.66106000 0.66106000 0.00000000 0.00000000 0.02609200 0.00513590 0.03411300 -0.70523000 -0.01409000 0.62996000 -0.02438800 -0.02438800 -0.02438800 0.20060000 -0.06196500 -0.00747200 0.00124810 -0.69342000 -0.00221680 -0.00221680 -0.00435570 -0.00435570 0.01460900 -0.68661000 -0.68067000 0.61952000 -0.64874000 -0.69758000 0.00499690 0.00499690 0.00499690 0.00499690 -0.68857000 -0.69051000 -0.71640000 -0.01656700 -0.69499000 -0.69378000 0.00000000 0.00000000 0.00000000 -0.69378000 -0.69991000 0.02426800 -0.69369000 -0.70523000 0.62996000 0.01349200 -0.07467800 -0.02438800 0.00682220 0.00694350 0.38965000 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 -0.108 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 -0.108 7.209368556 11.724988577 5.889867747 8.671006348 2.302465287 11.365600413 1.802400040 -1.004913521 8.559198870 6.824771671 -1.004913521 7.465321514 5.325965593 10.675848298 9.182401306 4.749936450 7.273499105 9.657272533 9.253615170 9.861941721 9.878234726 8.303388063 10.997160988 0.995014096 9.122398875 9.936463775 0.995014096 -1.004913521 10.527161651 3.352603176 11.818814540 11.766022800 7.705855599 9.638003403 6.837399607 9.537597568 5.859236588 2.518610671 -1.004913521 3.667472082 9.188574505 9.260078128 11.237181274 4.609760871 9.732845782 6.831099455 9.395928654 5.827938398 10.390851119 -2.005203073 10.604689709 -0.004913521 6.522526608 9.836314720 6.913524940 1.580000725 8.554426156 7.936096680 7.642507361 NA 13.517232282 0.316956668 10.334620898 NA 8.050331907 5.667474921 7.993639834 8.117877342 14.041885 6.712725 8.517631 13.223492 10.760543 10.234648 13.662521 13.839044 9.598903 10.766745 11.941499 10.709724 9.632580 8.807226 -1.004914 8.330440 11.609184 11.028472 8.031223 8.949245 9.165600 9.587039 10.720215 3.901938 8.231063 10.911302 6.779684 NA 8.434880 7.774522 9.756185 9.519101 7.446755 8.721267 11.845236 2.853038 11.855867 9.873867 9.767776 10.193187 11.289383 8.835827 10.778661 8.748266 0.802400 8.797574 2.901938 10.341286 5.989402 11.532268 9.775589 7.374600 13.687283 10.379293 9.612976 12.588207 10.207546 10.050671 0.580049 TCGA-E2-A1IF 74 0 NA 1138 breast stage i t1c n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 9.834598 8.750318 10.976973 6.846626 8.945629 8.839956 9.889244 9.657020 10.669864 12.426477 8.909135 10.192313 1.934403 12.344146 1.086376 10.666852 5.753161 8.802024 9.355999 12.549623 0.764516 13.070681 5.671367 10.536288 9.735301 4.914225 -1.235484 8.938154 9.943141 3.223901 7.495796 5.944385 NA 4.049875 8.754581 10.231573 10.424918 10.787538 9.013590 10.002881 6.578258 10.381485 14.435990 6.876812 9.596576 10.549111 10.258832 5.012403 6.603680 7.609967 11.340961 -1.235484 10.900186 5.012403 4.718674 4.786842 9.868420 11.568809 10.617396 12.190217 12.375271 9.102099 10.645591 10.148840 10.563353 10.198062 2.571822 11.508890 12.203139 5.436901 10.607613 8.203269 3.719140 3.464917 11.329817 9.821792 9.777799 8.843962 3.519366 9.725926 12.712935 12.408784 9.644826 10.216718 0.01225200 0.96763000 0.96763000 -0.00012310 -0.00012310 0.00000000 -0.00137030 -0.00164740 -0.00867610 -0.34353000 -0.34353000 -0.00095465 0.01225200 0.00473450 0.00584650 0.00584650 0.00584650 0.00390090 0.00390090 0.00209610 -0.00053892 -0.33536000 0.01253100 0.01253100 0.01253100 0.00515140 0.00515140 0.00515140 0.01532300 0.01225200 0.01225200 -0.00192440 -0.00012310 0.00445660 -0.01028000 -0.00137030 -0.00137030 -0.00164740 -0.00867610 -0.00867610 -0.00520370 -0.00150880 -0.34353000 0.00376210 0.00376210 0.00376210 0.00376210 0.00473450 0.00473450 0.00584650 0.00584650 0.00584650 0.00584650 0.00390090 0.00390090 0.00390090 0.00209610 -0.00053892 -0.33536000 -0.33397000 0.01253100 0.01253100 0.01420600 0.00515140 0.00515140 0.01532300 0.00362320 -0.34264000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 0.000 8.6516972 14.4258651 5.4369014 10.2663138 3.3023922 10.9754524 2.4649035 0.3494785 9.0852773 8.7826769 NA 7.9065840 4.3190687 10.5507463 9.4289239 2.0864101 8.5359662 9.4065284 10.9803130 11.0642571 9.2571311 6.0124033 11.8124526 1.9344033 9.6224577 10.0613928 5.4083314 NA 11.2550769 1.7644736 13.2942122 12.5328678 8.6271140 9.6255635 7.5814605 9.4235807 2.8519389 3.2239013 -0.2354840 7.2156873 9.4795806 10.8027098 10.0981911 5.2880374 9.0145263 8.1759876 10.4078819 5.9641491 9.6638336 -1.2354840 11.2399568 1.7644736 4.7186740 9.8755535 6.8728448 4.1567930 9.9884783 7.4509770 7.8466256 3.0124078 13.9885914 -1.2354840 10.3970175 -0.2354840 6.6713670 6.8143248 7.9268682 8.9167615 12.276600 6.012403 8.895047 12.344146 10.416425 11.557064 12.549623 11.151417 8.911682 10.017733 13.645017 9.720853 7.609967 9.234119 1.086376 7.364389 10.575048 11.198584 5.532660 8.825118 8.921824 7.898903 9.887453 6.609966 7.090906 8.909135 6.770101 3.408331 8.628663 6.312142 10.407882 10.165890 7.901468 9.925609 7.584656 5.478723 11.896756 10.424918 10.717582 10.257331 10.406528 10.192837 10.377345 7.447471 NA 9.262279 6.182329 10.900186 7.961693 11.171232 9.868420 7.021865 14.096758 10.455784 10.686689 12.362296 10.750674 9.604468 2.349450 TCGA-E2-A1IG 45 0 NA 2140 breast stage iib t2 n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.774378e-07 10.3045998 9.7247229 11.8228965 9.0438792 9.4060793 8.9987915 10.0192555 10.2527326 10.0919008 14.0285037 11.5383933 11.0313401 2.7870563 13.0812615 2.6995738 9.3948116 7.2580044 8.6854255 12.2297458 12.6531433 NA 13.6068496 2.8695161 9.1453845 11.6334584 7.1047245 -1.3004484 8.1487318 9.6911052 1.5069573 6.5261314 8.4292042 0.6995516 3.9475072 9.5117608 9.8955707 8.4956228 10.5016958 9.8912595 10.8143017 12.0045050 11.2336430 15.2689050 8.2224786 10.3411835 10.9256945 11.9943477 5.5944022 7.4842179 8.9581493 10.8172265 -0.3004484 11.0101962 6.6595850 4.6064718 4.4000255 9.6310595 11.9284020 10.5061330 13.0031501 12.7778176 8.2788992 11.0659056 10.9109759 10.7278348 10.8410520 4.8894103 12.0195377 10.8320831 -0.3004484 10.4996744 8.7804010 3.3759569 4.6537823 10.3515319 10.2694390 10.9727962 9.4460976 4.5324728 8.6668095 12.4335520 11.1939390 10.0582346 9.8275777 -0.01409000 0.71490000 0.71490000 0.00027728 0.00027728 0.00819590 0.00624810 1.42710000 -0.00277070 3.65690000 1.47810000 0.09579800 -0.01574100 -0.00871460 0.01307400 3.65690000 -0.75054000 -0.00719580 -0.00719580 0.01880300 0.04131700 -0.00512270 -0.78420000 1.28460000 1.37410000 -0.05796400 -0.05796400 -0.05877700 -0.01821600 -0.01409000 -0.01409000 -0.00456950 0.00027728 0.00724270 0.00819590 0.00624810 0.00624810 -0.19112000 -0.00277070 -0.00277070 -0.00263220 -0.00263220 0.79588000 0.00166420 -0.01042900 -0.01042900 -0.01042900 -0.00871460 -0.00871460 0.01307400 -0.04468600 -0.77782000 2.99230000 -0.00719580 -0.00719580 -0.00719580 -0.74336000 0.04131700 -0.01078400 -0.00249380 -0.78420000 1.28460000 0.00819590 -0.05796400 -0.05796400 -0.00484610 -0.00761010 -0.04115900 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 8.7843918 14.2637329 6.2994956 10.1600393 0.8663146 10.5776343 NA 3.1590156 8.6109754 8.3737757 -1.3004484 8.5604995 4.0919029 10.0175612 9.3675818 5.7656726 6.2073775 9.3271172 5.6184472 10.3045998 9.2544119 7.5037145 11.8274165 2.0215153 9.4069424 10.4435762 2.1590156 NA 11.2997286 2.4000187 11.9796291 12.3441157 8.0571356 10.2580040 9.1414900 9.3622518 6.3142941 0.2845141 NA 2.4000187 9.0789617 9.8436042 9.5269260 2.5069319 9.8748211 5.6882671 9.9409707 6.1258474 10.1671889 1.0214797 10.8175511 2.6995738 7.0789620 9.6332225 7.1445981 1.5069573 9.5037145 8.4069426 9.1100348 1.2845734 13.7668497 -0.3004484 11.6411813 NA 8.3470420 4.7656726 8.1610628 7.4677677 15.635817 5.630321 8.442735 13.081262 10.248887 10.189933 12.653143 13.223758 8.506938 10.695704 12.891799 10.651232 8.958149 10.598185 1.699596 8.199429 12.238863 11.1984326 6.6768640 8.4677677 9.4661124 9.2684896 10.3552572 6.4611340 9.5944011 11.5383933 6.6537795 2.7870563 6.7602795 7.8031599 11.7475593 10.2324263 8.9041544 9.4611346 11.0530059 2.6995738 10.8226281 8.4956228 10.9053766 10.1518246 11.4962314 9.7177835 10.7989312 8.9247908 NA 8.8753199 3.5069446 11.0101962 8.2290139 11.0800444 9.6310595 6.9427573 13.5772509 10.2939080 9.5316823 13.4289917 10.6967628 9.8992557 -0.3004484 TCGA-E2-A1IH 80 0 NA 1026 breast stage i t1c n0 m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 NA NA 1 4 2 4 4 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 3.467973e-07 10.3259460 10.2056358 11.4855079 9.0761272 9.0935620 9.1538066 9.2741342 10.8153714 9.3830685 8.7276458 11.5484965 10.7727165 -0.6077925 12.5397784 4.3464535 9.7298773 6.2931221 8.9903079 7.2901009 12.8864235 1.8516791 13.6673615 3.7498024 9.7541389 10.8853603 6.4690703 -0.0228300 12.2772844 9.0813798 3.0361165 7.3347703 8.4380150 NA 5.5721651 9.8346806 10.6845771 9.7781179 11.9983136 10.0247963 11.3428113 11.6410725 11.2546991 14.0865317 7.0622394 8.8444968 10.7840361 11.4325451 5.0926937 5.6017084 9.1562978 11.0347585 NA 11.1907273 7.9921685 8.0361115 4.2502340 10.9961136 12.2068379 10.6234766 12.5231477 12.9577741 8.2885879 11.4388679 10.7700787 11.5934605 10.6845771 4.6541605 12.4019091 12.2926506 NA 10.1218761 8.8289669 3.2078304 6.4529512 10.5653079 10.5489706 9.8042959 9.6971771 3.0926980 10.0835628 13.4691545 12.3542477 10.0513595 9.5986594 -0.8377700 0.5544300 0.5484100 0.1778400 0.1778400 -0.1849800 0.1746800 0.0134920 -0.0114030 2.6229000 -0.4991300 0.3399900 0.0083351 0.0158660 -0.1484400 -0.1353600 -0.1353600 0.1698600 0.1436900 -0.0030475 0.3757800 0.0000000 -0.4863800 0.2228300 0.2228300 0.4667300 0.0114000 -0.0018962 0.2406200 -0.4135500 -0.8377700 -0.1354900 0.1778400 -0.4974600 -0.1849800 0.1746800 0.1746800 0.0134920 -0.0114030 -0.0114030 0.3706800 0.3231800 -0.4280000 0.1608500 0.1608500 0.1608500 0.2222200 -0.5028700 0.4699800 -0.3322500 -0.1353600 -0.8360700 -0.8499500 0.1698600 -0.1689100 0.2015200 -0.0030475 -0.5070100 0.0000000 -0.4872200 -0.4863800 0.2228300 -0.3489300 -0.5202000 -0.0018962 0.2406200 -0.1132500 -0.4799700 0.000 0.000 -0.148 -0.836 0.144 0.144 0.000 -0.500 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 0.000 0.000 0.000 -0.148 -0.836 0.144 0.144 0.000 -0.500 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 0.000 10.1163429 12.8555882 9.1065009 10.0188771 5.3522571 10.2168164 4.1201777 NA 8.4650578 8.8289669 1.7141796 7.8881106 3.7498024 10.4717402 9.5350006 2.2991567 10.8843590 9.5646830 9.7942016 10.3634397 9.0041932 7.4393796 11.0401635 2.7141796 7.4393796 9.6874504 4.2748953 NA 10.4055781 2.7845668 12.7197379 11.7626704 9.4243011 10.6416652 8.6660510 9.4677345 4.9772158 3.0926980 1.1996252 0.9772433 7.7541994 7.0143073 10.4441441 5.7231735 8.6896989 5.9468431 9.9468443 4.9000505 9.4208523 -0.6077925 10.1235745 3.2502340 4.8516891 10.2884479 6.4519249 7.1133546 9.7656644 9.1039225 8.0252509 -0.6077925 13.6949301 1.1996252 9.9991233 NA 8.4090637 5.7141823 8.8122155 8.9800330 13.376496 6.601708 8.847583 12.539778 10.013850 10.745678 12.886424 10.970628 9.205491 10.600185 13.554096 10.322253 9.156298 9.477064 NA 7.919732 11.152560 10.783768 6.780273 8.856791 8.443465 8.467735 10.056818 7.202827 7.299146 11.548497 7.425678 1.392262 6.287073 7.104886 11.116556 10.893346 9.422923 7.716436 10.365594 8.565933 12.788213 9.778118 10.819044 9.826884 11.468069 9.677658 10.355874 7.845526 1.392262 8.602111 8.966849 11.190727 8.495543 10.525719 10.996114 6.452951 13.639033 10.249848 10.674185 12.869634 10.343904 9.587628 2.915827 TCGA-E2-A1II 51 0 NA 1025 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 9.63593646 9.53916696 11.46287645 9.87497981 8.27471639 8.74339177 8.74514588 10.29760723 9.71055144 12.34507680 11.36531897 10.35156793 0.06046249 10.88057625 2.96727930 8.12917533 6.71144948 8.74689787 10.26006966 5.45271403 NA 7.77464278 6.02618258 9.38963306 10.83147399 3.70425227 -0.93953751 11.21426593 11.12007973 2.96727930 8.35271881 7.43108469 NA 5.78831768 10.04837175 10.84952333 7.43108469 9.98149436 10.07371997 10.17218496 NA 8.06882610 13.75589746 8.48090489 9.01168208 10.79848954 10.23219953 3.14786022 NA 8.96427906 9.83847438 NA 10.79891183 5.61498658 8.69702176 5.30832447 9.28921592 11.92902693 10.14918555 11.49032704 12.63924166 6.15842994 10.71279411 10.83806359 10.94837942 10.82485423 5.14786022 11.89289176 8.83847438 1.86773835 10.19866910 10.68153342 2.31286844 6.22026804 11.27198142 10.24836785 10.27167720 9.66495050 4.55224795 4.41794700 12.84124458 12.31099178 10.29820477 9.50334078 0.1698600 0.6079200 0.5581500 -0.2784600 0.1861600 -0.2882200 0.6636400 0.6857000 0.1397600 0.2212900 0.1736200 1.3919000 -0.0308130 -0.0308130 0.1795000 0.1795000 0.1795000 1.2109000 0.6377400 -0.2760700 -0.2773900 -0.2661200 -0.2448400 -0.2448400 -0.2448400 0.2022800 0.2022800 0.2022800 0.2128400 -0.2482500 0.1698600 -0.2821500 -0.2784600 -0.2882200 -0.3201900 -0.2708100 -0.2708100 0.6857000 0.1397600 0.0612220 0.2159100 -0.2882200 -0.3204200 0.6619800 0.6708500 -0.2653500 -0.2631200 -0.0308130 0.0746960 0.1795000 0.1795000 0.1795000 0.1795000 1.2109000 0.6377400 0.6579200 -0.2760700 -0.2773900 -0.2661200 -0.2702100 -0.2448400 -0.2448400 -0.0070987 -0.2032400 0.2022800 0.2128400 -0.0310860 -0.2566000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 0.000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 0.000 9.96878989 11.35874630 1.64537887 8.02329306 6.43543691 11.91370683 1.06039331 NA 10.15645350 5.48666289 5.48666289 11.02182524 -0.93953751 10.43706530 9.65285429 1.38233524 6.98521009 9.86533489 7.72573298 8.15050992 9.00257455 7.43977604 9.79256468 3.45271403 9.13051831 9.26252101 4.84175680 NA 9.84829978 7.62263976 14.08800096 12.25914924 6.47825028 9.52800277 10.85521928 10.39746158 1.64537887 5.38232487 -0.93953751 NA 9.34232740 8.39131406 8.14520565 2.76083835 6.52914316 5.91837908 9.96653631 4.78832029 9.47296717 2.76083835 11.65775155 4.10478953 1.06039331 10.97682543 5.89278201 7.67142218 9.47719484 9.19738848 9.07302194 NA 13.85988129 0.06046249 10.62120774 NA 10.00803428 3.76083835 7.97926055 7.68244899 9.150510 8.199949 8.066022 10.880576 10.049082 11.886151 5.452714 9.780641 9.581016 11.867148 13.450969 13.174546 8.964279 7.560243 3.583964 7.404693 10.258228 10.360178 6.158430 8.752141 9.888534 9.051919 10.076307 8.532073 5.583958 11.365319 11.065671 NA 7.345799 9.154026 12.111096 11.195786 8.348110 8.505412 9.518804 8.707856 10.195055 7.431085 10.327184 10.176741 11.581752 9.303571 10.705155 9.164996 NA 9.737192 8.652854 10.798912 5.269852 10.607774 9.289216 8.116303 14.105858 10.426720 11.570914 12.302529 11.256999 8.790018 3.382321 TCGA-E2-A1IJ 57 0 NA 865 breast stage i t1c n0 m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 3 4 4 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 10.2492131 9.5900497 11.5728152 9.0389508 8.7621106 9.1605126 10.0728980 9.9253806 10.4367102 9.7864469 10.8984495 10.4028902 5.8530849 13.4812259 2.3612350 10.6610115 4.9759419 8.8165584 8.5633549 12.4775750 0.9462068 12.8439130 5.3385100 9.4814431 10.1845983 6.1161194 NA 9.2993404 8.4460395 1.9462068 9.0265669 7.7449354 -0.6386808 5.1425891 9.7567651 10.3241271 9.4995029 11.0967871 9.8308729 11.0599357 12.0737581 10.4015208 14.8062136 8.5986082 10.2469275 10.6274319 11.2078968 5.6280182 5.6091580 8.6581472 11.9595162 -0.6386808 10.3918982 5.7706229 6.8041749 5.2681199 10.3470730 11.5972452 10.4592632 12.4876129 12.6340066 8.4513434 10.9964957 10.6281288 11.1001678 10.8052106 4.1685859 11.7605090 9.2362125 NA 10.5559879 8.8103798 2.1706301 5.6466321 10.4400490 9.9263331 10.2867855 9.5398959 4.3154286 9.9158199 13.2807462 12.5317821 9.9405471 9.9396037 -0.00180140 0.51037000 0.51037000 0.00110930 0.00110930 0.00332990 -0.00152430 0.00000000 0.00000000 0.00416320 0.00416320 0.00416320 -0.00401620 -0.00401620 -0.00180140 -0.03750000 -0.03750000 -0.00263220 -0.00263220 0.01321300 0.00083195 -0.01130100 -0.33653000 0.31723000 0.31723000 -0.00401620 -0.00401620 -0.00401620 0.00444110 -0.00393170 -0.00180140 -0.00249380 0.00110930 0.00332990 0.00332990 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 0.52976000 0.00819590 0.00416320 -0.00377220 -0.00377220 -0.00377220 0.00097064 -0.46887000 -0.00138580 -0.00180140 -0.03750000 -0.03750000 -0.03750000 -0.00263220 -0.00263220 0.00097064 -0.00180140 0.00083195 -0.00110870 -0.23631000 -0.35842000 0.31723000 0.00360760 -0.00401620 -0.00401620 0.00208050 -0.00705760 -0.41059000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9731780 14.0203908 7.4001502 10.5097076 3.4056248 10.6854116 1.3612069 2.1685779 8.4905140 8.5286491 NA 8.2377482 3.4486896 9.8906616 9.2004350 2.1685779 9.6138964 9.5948508 10.2711241 10.6741140 9.4673753 7.5559879 11.7772368 3.8847933 9.8600802 10.0494814 3.8206589 NA 10.9414896 3.3612350 12.9124587 11.8754520 8.0993231 9.9518181 8.6809031 9.1798133 2.9461881 2.1685779 0.9462068 4.8847933 8.3008101 9.5485830 9.8749586 4.7535511 8.1870487 6.1556460 9.7384416 5.6650118 9.5924522 NA 11.3877545 3.1685939 5.1425891 9.5714032 6.4775753 5.2192111 10.5485831 8.9081254 7.7055266 NA 13.6875903 0.9462068 10.3640461 -0.6386808 9.1161186 5.7187835 7.6650118 8.6943864 12.792526 5.194123 8.707745 13.481226 10.461236 10.456628 12.477575 12.061888 9.145359 10.658721 13.328637 10.126932 8.658147 10.871006 NA 7.669570 10.933458 11.237364 5.033656 9.001476 8.785397 8.136018 10.121593 7.687661 7.560904 10.898449 8.253015 5.219211 6.762111 6.146128 11.888952 10.893100 7.979617 9.124443 11.089152 6.968561 12.366578 9.499503 10.570075 9.853084 10.857086 10.466485 10.472367 8.716582 NA 10.039329 6.908126 10.391898 8.923473 10.947527 10.347073 7.262098 13.821815 9.878900 10.338511 13.260210 10.687099 9.720981 2.361235 TCGA-E2-A1IK 71 0 NA 1800 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 4 NA NA 1 1 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 9.3577963 9.1936624 11.2944293 8.4281273 8.5007312 9.0708664 10.7597957 9.9625748 10.6726218 13.9054810 11.4554985 10.5254121 NA 10.6647435 2.4739427 10.3675361 6.7218593 8.1206697 10.2099948 13.8716058 0.1519887 14.1745443 6.5270422 10.1444883 10.2566018 8.6478581 0.1519887 9.2552909 11.3954746 NA 7.9561339 6.6196082 NA 4.1963946 9.2709442 9.9341822 9.7369655 9.6930997 9.6843591 10.4443247 7.2447606 11.8831099 13.9465205 7.1791905 10.7322617 11.3744961 10.6473585 1.4739427 NA 8.3951772 10.0834793 0.7369944 11.1761039 4.3999298 5.3614561 3.4739297 10.1792179 11.3981499 10.2381393 11.1660236 12.2993670 7.4918531 10.4580648 10.6175695 10.6383354 10.2915544 3.6755676 11.5367868 9.8021573 -0.8478815 10.2394659 8.4648859 0.4911861 6.0468206 10.6348111 9.4477720 10.1881767 9.4500656 2.8524384 9.0483354 11.2889942 11.6981741 9.6568220 8.8472315 0.00069327 0.00069327 0.00069327 -0.06397200 -0.06397200 0.00221930 0.00208050 0.00305220 0.00305220 -0.00156890 -0.00156890 -0.00156890 0.00069327 0.00069327 0.00000000 0.00000000 0.00000000 0.00235810 0.00235810 0.00124810 -0.00013862 0.00041593 -0.00097017 -0.00097017 -0.00097017 0.00069327 0.00069327 0.00069327 -0.00553750 0.00069327 0.00069327 -0.01106000 -0.06397200 0.00221930 0.00221930 0.00208050 0.00208050 0.00305220 0.00305220 0.00305220 -0.00041585 -0.00041585 -0.00156890 -0.00277070 -0.00277070 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00000000 0.00000000 0.00000000 0.00000000 0.00235810 0.00235810 0.00235810 0.00124810 -0.00013862 0.00041593 -0.00193990 -0.00097017 -0.00097017 0.00166420 0.00069327 0.00069327 -0.00553750 0.00124810 -0.00816240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.3808216 10.7099454 3.4739297 8.7994617 3.4925711 9.8722473 2.8524384 -0.8478815 8.6358190 6.5270422 -0.8478815 6.3516760 0.7369944 10.6358189 8.7218586 0.1519887 7.1235462 8.9512847 11.5977939 10.7402493 10.0949500 7.2394658 10.4152723 3.3999367 10.2928328 9.7868141 2.4739427 0.1519887 10.1061994 3.8524384 13.4761836 12.9034426 7.1688115 10.8623791 9.5539493 9.3430622 4.8524434 2.4739427 NA 2.3219281 9.0693751 10.3449124 9.5453935 2.6114321 9.1535662 7.6032139 10.6221535 6.5613934 9.5302979 NA 13.2440995 2.8524384 9.5150428 9.7005167 7.1271060 5.3999298 9.1854260 7.2966611 10.2728889 -0.8478815 13.9588044 -0.8478815 11.3020677 NA 9.1757574 5.8662478 7.9201873 9.8645301 14.142392 4.879921 8.738843 10.664744 10.054378 10.566160 13.871606 12.623170 8.784998 10.283860 12.815228 11.136422 8.395177 7.755629 2.151989 7.599086 11.380521 10.269646 7.827960 8.716153 8.710424 7.729432 9.464807 6.651850 8.790439 11.455498 7.058893 NA 8.601152 7.329473 11.945200 10.052870 8.522691 9.488510 10.816895 6.464886 10.557740 9.736966 10.830603 10.168115 10.758871 8.910226 10.320675 8.913554 NA 9.412205 7.129283 11.176104 4.906891 11.687278 10.179218 6.683385 14.170899 10.966185 10.586631 12.883004 9.568801 8.704672 1.473943 TCGA-E2-A1IL 78 0 NA 118 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 10.8535286 10.3695313 12.4371795 10.4235159 8.0451005 8.3869282 11.5719259 9.0249227 9.6292280 13.2194022 10.7642993 10.5885621 1.6825284 13.2932917 4.9626369 9.8954611 7.7790574 8.3284461 10.5248809 13.3904442 2.4601397 13.6793571 8.3730274 9.4065571 10.9054979 10.2653445 -1.1246917 10.5838285 10.0985740 3.6300676 8.6793066 7.1372709 0.4601659 3.5756149 10.7068787 10.5338334 10.3279316 11.4825059 9.6671524 12.4150614 -0.1248490 11.2626545 14.3905367 9.0030538 10.5542158 11.9853326 11.6423255 4.4898833 6.1039948 9.1302042 12.1078963 1.4601135 11.0067111 4.3987403 4.4898833 4.9412660 9.6491390 11.5917808 10.5506917 12.1441561 13.1540606 8.3610051 10.9085986 10.8531710 11.6130567 11.6758733 5.6030952 11.5990498 10.4402776 -0.1248490 10.2349252 9.0723923 5.0050766 4.6825284 10.6124230 9.9399184 10.4478759 9.9506547 2.3345969 9.9941166 13.9683043 11.4880441 10.6776920 10.0557064 0.00055459 0.64781000 0.65940000 0.00013863 0.00741170 0.00930980 0.00708260 0.67715000 -0.71417000 0.00263570 0.00263570 -0.72906000 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.01056400 0.00000000 0.64649000 -0.02000100 -0.02000100 -0.02000100 -0.03422300 -0.03422300 -0.03422300 -0.01092200 -0.01174900 0.00055459 -0.01652900 0.00013863 0.00930980 0.01349200 0.00708260 0.00708260 0.67715000 -0.71417000 -0.71417000 0.00106230 0.00287120 0.00263570 -0.00152430 -0.00152430 -0.00152430 -0.00995650 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.00208050 -0.70397000 -0.00593800 -0.01202400 -0.73512000 -0.02000100 -0.02000100 0.00263570 -0.03422300 -0.03422300 -0.01092200 -0.00221680 -0.73178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7237985 13.3919837 7.0650003 9.9666110 2.9151958 12.1003830 0.8751510 -0.1248490 8.5154207 8.6499628 -1.1246917 8.1812373 5.0846298 9.8169569 9.7041054 0.4601659 8.4316819 9.3589913 11.1066968 10.4746236 10.2326837 8.7128035 11.4347917 2.1971105 10.5664830 9.4852777 3.5190260 NA 10.2977661 3.0450934 12.3325565 12.0047806 7.7269245 10.1959761 8.7470809 9.1039943 7.1789566 1.1971105 0.8751510 2.6825284 9.2316275 8.8905908 10.0680848 5.3829715 8.8891124 6.4825063 10.2577996 6.1513007 9.7253625 -1.1246917 13.7327679 0.4601659 5.0451022 9.4960918 6.7948733 3.2674909 8.9412648 7.9573244 5.3829715 1.4601135 13.6440319 0.8751510 10.3330695 -1.1246917 7.8409598 5.1971026 7.5440603 9.1651944 13.055677 4.547598 8.780563 13.293292 10.553014 10.978791 13.390444 13.559596 9.328446 11.124289 13.029836 8.248040 9.130204 9.332556 -0.124849 7.338700 11.272048 11.506807 8.740909 8.855315 9.387916 8.007032 10.632874 5.460140 8.408506 10.764299 5.720667 3.630068 5.897543 5.564476 10.879045 10.314487 8.836625 8.243682 13.031022 5.045102 11.620913 10.327932 10.099177 10.008960 10.614112 10.305105 10.939918 9.400696 NA 9.609038 4.123103 11.006711 6.701724 10.415735 9.649139 8.001880 13.470666 10.004459 10.400696 13.061677 10.170371 10.130204 2.197111 TCGA-E2-A1IN 60 0 NA 675 breast stage i t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 3 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.473685e-06 1.768666e-06 10.5127754 10.4228553 11.7112942 8.6250619 8.6931262 8.7653687 10.3461091 10.2557554 9.8597759 14.3035654 10.6357256 10.9767495 1.8246457 12.5128427 3.5836515 9.8500122 6.6749662 8.6270516 8.1521261 13.1266834 -0.8756719 13.8348919 2.7680784 9.8650589 11.0923467 6.7352446 0.1241958 12.0556195 10.0091536 1.1241958 9.2070343 7.2275081 1.2941355 3.9315791 9.6964465 10.1068571 8.0341128 11.8684231 10.0824101 11.1104175 6.1242206 11.8144362 14.8132624 8.2643980 9.6997309 10.8408250 10.8146545 4.2535053 4.8924056 8.9121226 10.9825895 -0.2908859 10.8069951 6.4325586 5.5250979 4.9315743 10.2441337 12.0775979 10.8350264 12.1690409 12.4491037 8.1548870 10.6752072 9.9925332 11.0778708 10.8770187 4.6633788 11.7778488 12.1085494 1.4461503 10.1960174 9.7837700 4.1060719 5.2840921 11.3651603 10.0011205 10.3712574 10.4416326 4.4461503 9.0265951 12.5704632 12.1312472 10.3044400 9.6477818 0.8278400 1.3748000 1.3748000 0.0155870 0.0155870 -0.0042929 0.7408100 0.4184800 0.0134920 1.1707000 1.1707000 1.1707000 -0.3697400 -0.3697400 -0.0091286 -0.0091286 -0.0091286 0.0317180 0.0317180 -0.3643600 0.0301690 -0.0034627 -1.0032000 0.0335490 0.0335490 -0.1672600 0.5879300 0.5829800 1.5125000 -0.0224690 -0.0221950 -0.3125600 0.0155870 -0.0042929 -0.0042929 0.7408100 0.7332200 0.4184800 0.0134920 0.0134920 0.0000000 0.0000000 -0.7517600 -0.0814720 -0.0814720 -0.0814720 -0.0814720 -0.3697400 -0.8011500 -0.0091286 -0.0091286 -0.0022678 -0.0022678 0.0317180 0.0317180 0.0317180 -0.3571500 0.0301690 -0.0103700 0.0461330 -1.2929000 0.0335490 -0.7535700 -0.1672600 0.5879300 0.3657500 0.2477800 -0.3523600 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 0.000 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 0.000 9.2037048 14.2029962 8.3103342 10.1761086 1.6096604 11.2941450 -0.8756719 -0.2908859 8.5452329 9.8350264 0.1241958 8.0109074 1.7092024 10.0780526 8.9704939 2.2116975 7.2169767 9.6019782 8.0490322 9.3780674 9.2147162 8.2235678 11.2086962 2.9821996 8.9845310 9.8037001 1.7092024 NA 10.2941449 2.6477750 13.1669480 12.3249653 8.6130642 10.4929992 8.2457533 9.8067756 4.8246609 -0.8756719 0.4461503 4.4640670 8.4640699 8.7380095 10.1531620 4.0311128 7.1270348 5.4551365 9.9432015 4.6633788 9.6893221 -1.8756719 10.6689429 2.8246660 4.0068635 9.8939669 5.5687375 1.8246457 9.1876151 7.5979259 5.5420723 NA 14.1120169 0.4461503 10.7236679 NA 8.0564345 7.7535765 8.4382367 8.6290389 13.521042 5.944399 8.729700 12.512843 9.976749 11.102752 13.126683 11.971081 9.307855 10.460448 13.356753 10.596149 8.912123 10.466850 2.124229 7.333673 12.103913 11.3525877 7.9331843 8.9483830 9.3342824 8.1335029 10.2543174 6.3673938 8.3804286 10.6357256 7.6019780 6.0725882 5.4003432 7.2931424 10.9928496 10.3554411 9.3780674 8.4484005 10.5933529 4.0784134 12.0087654 8.0341128 10.4099112 9.8436088 10.9145684 9.7361668 10.7567608 8.8749270 3.8521387 9.0499079 4.3530409 10.8069951 9.1658790 10.3136461 10.2441337 7.5569083 14.3346820 10.3783628 10.7345527 12.9061943 10.6597384 9.6394270 0.4461503 TCGA-E2-A1IO 37 0 NA 1855 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 NA NA 3 4 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 10.6317051 9.9261992 12.4123720 10.3487767 8.2214919 9.4320591 10.7266256 10.0321715 10.0907382 13.8091031 10.5878904 10.9333290 5.6020708 13.1510832 3.8540455 10.0115907 5.4512903 8.6225731 9.0022325 12.4005481 5.1232358 12.8289052 6.0362528 9.0659401 11.1373159 2.8165792 NA 9.7094769 9.2463668 4.1232358 8.2999663 8.0095163 1.1536108 5.6347356 9.9029204 10.1327966 9.2991173 10.9590848 10.7354379 11.9201386 2.7385733 11.4932741 15.1264848 9.2181280 10.0926990 11.0569894 11.6077375 5.1078050 6.9907121 9.6293431 11.3220729 -0.4312869 11.0789168 7.5286495 6.4755373 5.2410736 9.8552049 11.5045488 9.5721651 12.6037899 12.7782528 8.1778261 10.7787096 10.4417452 11.5523533 11.8411312 5.1385032 12.1078060 11.6887230 -0.4312869 10.5355131 9.4770398 4.5249350 5.4266271 9.5337099 9.8064546 10.3037801 10.5162841 3.1536108 7.9062689 12.9038979 12.6000899 10.1727370 10.1925287 0.029967 0.044574 0.060079 -0.426480 0.134060 1.647200 0.011958 -0.475960 -0.018842 -0.468650 -0.468650 0.570770 0.055088 0.055088 0.029747 0.029747 0.029747 0.266710 1.431900 -0.444370 0.120350 0.049398 -0.487010 0.017596 0.022865 -0.084130 -0.084130 0.435980 0.585420 0.029967 0.029967 0.000000 -0.426480 0.077862 -0.438640 -0.458220 -0.458220 0.141020 -0.018842 -0.018842 0.244980 -0.004396 -0.468650 -0.444150 -0.474900 -0.443510 0.476500 0.055088 -0.045371 0.029747 0.029747 0.029747 0.029747 -0.467350 -0.457680 -0.457680 -0.444370 0.093745 -0.462460 -0.482810 -0.487010 0.017596 -0.159880 -0.084130 -0.084130 0.585420 -0.470780 -0.493500 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 0.000 10.1998242 14.2499679 9.5279246 10.5993143 4.8905732 10.8007682 2.3760125 0.8905634 8.4141372 8.6306934 0.5686159 8.6890793 2.3760125 9.9764460 9.6300184 1.8905634 10.1498477 10.3029334 8.8917020 9.3800218 9.9733098 8.3351759 10.7043565 3.9949146 8.4250728 10.0053587 4.9261987 -1.4312869 10.9631099 2.9609565 12.4737521 12.4133529 8.4830322 10.0074390 8.0280790 8.9949120 9.5770759 2.1536108 -1.4312869 4.3760055 8.6198561 9.3735849 9.9588161 4.5910151 7.6465846 6.1759776 9.7304088 8.1097440 9.5401906 NA 10.9425998 4.0604971 3.6979295 9.5040332 5.1753849 6.3368314 9.6347363 8.1251531 8.4188338 NA 13.3385883 0.5686159 10.7710772 -0.4312869 7.1460758 6.1685598 7.7829661 7.8563595 12.560018 5.623928 9.715852 13.151083 9.931139 9.737946 12.400548 13.226468 9.299966 11.135177 12.919379 10.676845 9.629343 8.722199 1.738552 7.187032 11.435540 12.276761 6.835434 9.236646 8.886060 8.121316 11.563073 7.780535 8.140400 10.587890 6.481536 4.269086 8.054476 6.895975 11.747779 11.134225 7.770771 8.288036 11.941104 7.610307 11.776203 9.299117 10.398370 9.902920 11.634568 10.358588 11.551997 10.003796 6.130890 9.265041 7.782966 11.078917 8.103922 11.704722 9.855205 7.937154 13.583147 10.214756 10.379620 12.846007 11.088775 10.622912 3.212507 TCGA-E2-A1IU 60 0 NA 337 breast stage ia t1c n0 (mol+) m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 10.926709 9.824123 11.681359 9.959543 8.591004 9.414528 10.271190 9.246991 9.907385 12.983981 11.745639 10.539733 3.418001 13.392635 3.671758 9.414528 5.927015 8.343269 9.824777 12.702691 3.109879 13.049597 7.105578 9.562266 11.115769 6.772842 -1.282439 8.607824 11.901196 2.624452 7.361417 6.563050 NA 5.389987 10.156872 10.825758 11.502399 11.435451 10.198350 11.565401 6.531341 11.183127 14.294251 6.605146 9.789693 12.514310 11.334109 3.761955 6.660074 9.201376 12.881367 NA 11.410829 4.826086 5.648299 4.389987 10.671757 11.483261 10.638285 12.054067 12.957457 7.879951 10.979655 11.065860 11.439300 11.195824 5.332271 11.700019 9.768089 NA 10.209413 9.060746 3.178300 4.648299 10.295933 10.117906 10.112559 9.665927 4.575542 10.593693 12.520581 11.951330 9.418867 9.584066 -0.00041585 -0.00041585 -0.00041585 0.00714090 0.00748970 0.00736090 0.20305000 0.00597000 0.00597000 0.00416320 0.00416320 0.02749700 -0.00083160 -0.00083160 0.17830000 3.65690000 0.65479000 0.00416320 0.00000000 -0.01312700 -0.01161100 0.00055459 0.01307400 0.01307400 0.01307400 0.01447000 0.01447000 -0.00277270 0.01488800 -0.00041585 -0.00041585 -0.00761010 0.00714090 0.00736090 0.00636400 0.20305000 0.20305000 0.00597000 0.00597000 0.00597000 -0.00277070 -0.00940460 0.00416320 -0.08519200 -0.08519200 -0.08519200 -0.08519200 -0.00083160 -0.00494980 0.17368000 -0.56634000 -0.59195000 -0.59195000 0.00416320 0.00000000 0.00152550 -0.01312700 -0.01161100 0.00055459 -0.59253000 0.01307400 0.01307400 0.20366000 0.01447000 -0.00277270 0.01488800 -0.00833230 -0.02329200 0.000 0.000 0.104 -0.488 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 -0.488 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8352034 11.5212877 4.5249162 9.1195064 4.4724488 10.2596248 3.5755423 1.8874863 8.1932937 7.3322702 -1.2824387 6.5715555 0.7175613 10.2243636 9.4292272 1.3025238 8.0236219 9.0304431 11.9758318 10.5321427 9.5573781 8.0121809 10.4653336 2.5249162 10.0372323 9.8692110 5.6364245 -1.2824387 10.6695734 2.6244519 12.1775040 12.0700175 7.2798028 10.6615401 8.2312879 9.1861843 4.2721501 1.3025238 0.3025238 6.4791109 9.2411220 9.1280116 10.2552640 4.7836505 6.9745706 6.5119756 10.6116200 6.7062446 9.8234687 NA 10.9330932 2.8050241 5.9843478 9.8675359 6.4581507 6.4791109 9.7012664 7.6862267 8.0662884 0.7175613 13.6440878 -0.2824387 10.1506239 NA 6.0662873 5.5249162 7.2371966 9.6085844 14.9580776 5.1438260 9.2807564 13.3926351 10.4590271 10.6059229 12.7026906 12.3806735 8.5200765 10.9767150 12.8273908 10.3230397 9.2013761 7.4923475 0.7175613 7.7863382 10.7568220 11.049877 7.201376 8.648298 8.842974 8.724588 10.222826 7.066288 6.118439 11.745639 5.984348 NA 5.857113 6.814539 10.580972 9.886859 8.737151 8.465753 12.867942 6.279802 10.255021 11.502399 10.773859 9.059635 11.853590 9.471613 10.463234 8.613893 NA 8.987236 8.016768 11.410829 5.993686 10.941260 10.671757 6.836501 13.602255 10.310951 9.939751 12.702424 9.600967 9.425782 2.524916 TCGA-E2-A1L6 44 0 NA 1648 breast stage iia t1c n1mi m0 female 2007 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 10.5641354 10.2203637 11.7635208 9.4866607 8.4001378 9.6268965 10.4888526 9.9979085 9.5359462 13.2551325 10.9701613 10.3417430 3.0728775 12.5529557 3.9326943 9.0636628 7.3458949 8.7124513 9.6421692 13.1301659 6.3347971 13.6593684 6.3732706 9.5768256 10.4176652 5.4265130 NA 10.8231054 10.5434973 4.7103050 7.2866557 7.6194849 -0.6820014 3.7442580 9.8759308 10.5087392 11.6977731 11.9082248 10.2590362 11.1184841 7.8474195 12.0382329 14.3315294 9.7562451 9.6483454 11.5285078 11.4868174 4.7774197 1.9029611 9.1814005 12.1013961 NA 11.3764878 4.9618455 7.3705566 4.2006299 10.6441371 12.0479279 10.4791205 13.1114395 12.9664586 8.5575870 11.1927779 10.8676313 11.5036384 11.0709964 5.0459103 12.0329853 10.3417430 0.3179986 10.2605031 8.9957084 3.9300466 5.3403557 10.7342584 10.2941947 9.8787990 9.8940004 3.7103050 9.9921808 13.2524627 12.1641646 9.8644008 9.4206205 0.0019418 0.4621200 0.4621200 -0.0096806 -0.0096806 -0.0128510 0.5107600 -0.0221950 -0.0221950 0.4218300 0.0391950 0.0413170 0.0024969 0.0024969 0.0000000 0.0000000 0.0000000 -0.0078863 -0.0078863 -0.0094046 0.0019418 0.0130740 0.0063871 0.0063871 0.0063871 0.0105640 0.0105640 0.0105640 0.0165650 0.0019418 0.0019418 -0.0102640 -0.0096806 -0.0128510 -0.0103700 -0.4897400 0.4236800 -0.0221950 -0.0221950 -0.0221950 -0.0099565 -0.0104180 -0.4775400 -0.4979800 0.0033299 0.0033299 0.0033299 0.0024969 0.0024969 0.0013868 0.0000000 0.0000000 0.0000000 -0.0078863 -0.0012473 -0.0012473 -0.0094046 0.0019418 0.0227250 -0.4949600 0.0063871 0.0063871 0.0037465 0.0105640 0.0105640 0.0165650 -0.0033243 0.0215960 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 0.000 8.7733159 12.3719993 5.9762009 10.0716232 2.3465598 10.3347969 2.7103050 0.6398804 8.2590361 7.6421694 NA 7.9588119 1.6399267 10.3347969 9.1556164 2.6399267 8.4536978 9.2211173 10.7076199 10.3981399 9.7383331 8.5323076 10.6191989 3.7103050 8.8503444 10.0552359 6.6489054 NA 9.5964380 4.0459060 12.9085172 12.2671770 7.8257831 10.4588183 8.2353609 8.9904140 5.2248776 2.1253535 1.1253205 2.2248738 8.6600633 9.1365708 10.7062751 4.9761986 8.3205785 6.2006319 10.2619685 6.1124041 9.7140581 NA 11.0770445 2.9029418 6.7103064 9.8303883 6.7349968 3.9618455 9.4317308 7.0009836 6.8376254 NA 13.9081663 0.6398804 9.9478006 NA 9.2590361 6.0661818 8.0287951 8.7987789 12.8765803 5.1634786 8.8474191 12.5529557 10.4619457 10.7552205 13.1301659 12.7571052 9.0501561 10.6351185 13.3290848 10.5228653 9.1814005 8.6068545 0.6398804 7.2457666 11.3725929 10.908342 7.043014 9.338969 8.682123 8.501624 10.152724 6.462646 6.688676 10.970161 5.603392 6.561163 8.985987 6.751532 11.035451 10.121313 8.372783 8.298128 12.003394 4.760934 12.546023 11.697773 10.181013 9.724194 11.454179 9.533522 10.429450 9.475967 NA 9.421139 6.066182 11.376488 6.684311 10.624423 10.644137 6.849370 14.061140 10.323262 10.563541 12.910446 10.182175 10.062402 2.405448 TCGA-E2-A1L7 40 0 NA 1836 breast stage iiia t2 n2 m0 female 2009 NA yes infiltrating ductal carcinoma 7 white not hispanic or latino NA NA 4 2 NA NA 1 1 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 2.774378e-07 10.27706697 9.86146506 11.98922066 9.19523513 8.96665916 9.14665497 10.39614193 10.32969556 9.42239701 12.25932663 11.89328443 10.47055812 2.27875794 10.91320665 2.86372044 9.30445195 7.10657760 8.18083212 9.02426482 12.31218160 4.41625876 12.30735538 6.36622078 10.04740615 11.26715929 7.81791739 NA 10.76216325 11.12644236 2.54178739 8.29668040 7.50757743 3.34915293 4.48039439 10.13860395 10.12173747 9.00259030 9.88682858 9.91900348 10.39510255 2.54178739 11.21126863 14.73133448 8.80035895 10.59933351 9.86071238 9.68899787 4.34914586 3.27875794 8.85467611 10.06077387 NA 10.87345642 5.72501581 7.18564953 5.34914940 8.84405103 12.26303464 9.80935994 12.68995177 12.83851807 6.43256361 11.62859267 11.25905246 11.54905394 11.84119183 5.12675402 12.92234427 11.54296660 -0.04319988 10.55488302 9.20238319 4.60126269 6.73161772 11.53378715 10.61459556 10.48918646 10.61816330 6.38309599 10.40597917 11.81617116 12.00259016 10.34914796 10.00735937 0.1007400 0.1007400 -0.7736300 0.0705300 0.1733200 0.0269350 0.7596800 -0.7847900 0.7798400 -0.7498500 -0.7498500 1.3746000 0.0127950 0.0428740 0.1061400 0.0244080 0.0244080 -0.0842620 -0.2299400 0.0000000 0.0888370 1.0180000 -0.7297600 -0.7297600 0.0806010 0.0143300 -0.0537090 0.0758470 0.1219600 -0.2369200 0.1007400 -0.1026300 -0.6838700 0.0202030 -0.7630800 -0.8317100 0.4973500 -0.7847900 0.0172640 -0.0082047 -0.7662900 -0.7346800 -0.6618900 -0.7831100 0.0668680 0.7833100 -0.5856900 -0.7238500 -0.8407200 -1.1118000 0.0244080 -0.7580600 -0.7789700 -0.0842620 -0.2142900 -0.7544400 0.0000000 -0.7526200 -0.5054600 -0.7296700 -0.7297600 -1.2929000 0.8345100 0.0369350 -0.2230700 -0.7706500 0.0200630 -0.0164290 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.730 -0.730 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.168 -0.168 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 -0.169 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.730 -0.730 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.168 -0.168 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 -0.169 9.08868755 12.46015937 5.10657864 10.31052872 4.28128281 10.66634518 3.34915293 -1.04305123 8.21657369 8.60608684 -0.04319988 7.90811516 4.97919766 11.20446141 9.75530238 5.44868295 8.87867140 9.44165341 10.05354568 10.00667910 9.72331793 7.82719533 10.43357668 1.95683728 8.07317435 9.60698477 3.04428919 NA 10.85656504 5.77700934 12.09973529 13.00710431 7.42850590 10.22068655 10.47892156 9.87046799 7.55674361 1.76417628 NA 7.72501513 8.83027466 10.36516027 8.80545337 4.34914586 7.96360532 6.75773002 9.84252682 7.58982564 9.69829750 NA 10.30223576 4.31438475 4.62925752 9.02834648 6.73372446 5.65727128 9.59073393 8.91972651 7.46462498 -0.04319988 13.56589378 0.95680012 10.43913430 NA 8.44868377 3.71171515 7.95118387 7.42850590 8.89282055 7.87867140 8.37045856 10.91320665 10.66892752 9.03631540 12.31218160 13.00096844 9.55565532 10.89273215 12.56566283 11.58253935 8.85467611 7.60788213 -0.04319988 7.72501513 9.76499032 11.307770 7.200004 8.833347 8.580712 7.578882 10.192228 7.691540 4.956833 11.893284 10.069922 -1.043051 9.307770 9.432007 9.620389 9.709211 6.984736 9.360908 9.930528 6.534259 11.136998 9.002590 10.079011 10.444671 10.689846 8.796034 11.266307 8.631023 2.657274 9.141768 7.126755 10.873456 6.340536 10.630140 8.844051 8.067966 13.973204 10.370458 10.027622 11.679851 11.681984 9.891259 1.541812 TCGA-E2-A1L8 52 0 NA 2240 breast stage iib t2 n1a m0 female 2008 NA yes infiltrating lobular carcinoma 2 black or african american not hispanic or latino NA NA 3 3 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 11.21358313 9.97795488 11.20863394 8.86506078 9.27247676 10.16245704 9.60181665 10.29988295 9.82735160 10.62800291 10.51025839 10.78586372 1.24616483 12.53353359 3.43879850 9.22588247 5.05350672 8.80402483 10.83887497 13.39008080 1.43877190 14.29117928 3.72420277 9.80650016 9.92462533 8.05534481 0.02375214 8.19201263 10.88974951 1.24616483 6.08984768 8.74827236 NA 4.43879850 10.02234895 10.72188442 10.07542072 11.03568466 10.01716878 10.79497293 2.52626917 11.37414535 13.82189282 7.24981791 8.70792264 10.98327760 11.50337045 4.58854075 -1.56106846 9.07179136 11.87680818 0.02375214 12.71884185 5.72419731 6.00103882 4.02376101 10.43102638 12.04033476 9.92361897 12.29658273 13.12617177 8.45977586 11.63938819 11.37415638 11.69249585 10.61247322 4.27168712 12.27602978 12.76859242 0.43882511 10.56324052 8.71724561 3.43970292 4.93064746 10.96211301 9.95449587 10.11739622 9.67660363 2.02375214 8.67600606 13.53551123 12.53303875 10.19326612 9.46601098 -0.3699700 0.7713700 0.7698300 0.0199230 0.0319990 -0.3536200 0.0565130 -0.3602200 -0.3602200 -0.8088100 -0.3564700 -0.3564700 0.0336430 0.0445740 -0.3585200 -0.3585200 -0.3585200 0.0171240 0.1423600 -0.3523600 0.0435820 -0.3829100 -0.3902900 0.0102850 0.0102850 0.0000000 0.0000000 0.0080567 0.0359470 -0.3699700 -0.3699700 0.0185230 0.0319990 -0.3620400 -0.3543000 0.0565130 0.0565130 -0.3602200 -0.3602200 -0.3602200 0.0414580 -0.3614700 -0.8088100 0.0444320 0.0444320 0.0444320 0.0253900 0.0445740 0.0445740 -0.3585200 -0.3585200 -0.3587600 -0.3704700 -0.8158900 0.1423600 0.1423600 -0.3523600 0.0435820 -0.3666900 -0.3858300 -0.3902900 0.0102850 0.4324300 0.0000000 0.0000000 0.0359470 -0.3649900 -0.3881700 0.000 0.000 -0.359 -0.359 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.432 0.432 0.000 0.000 0.401 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 -0.134 0.000 0.000 -0.359 -0.359 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.432 0.432 0.000 0.000 0.401 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 -0.134 9.27405708 12.32810991 9.26613882 9.72419834 3.08265150 9.98906192 0.43882511 NA 7.85453805 9.42392645 NA 8.14472196 3.60872646 10.39662362 9.23321197 0.02375214 11.10035150 9.42819056 8.04612650 10.05901586 9.06661261 8.13923566 11.24816229 1.89820835 9.28114647 9.53155321 1.76073192 NA 10.20739398 2.96236393 12.81979819 11.40530152 8.72304176 10.23361800 8.82357997 9.25417947 4.48319021 1.43877190 0.76068935 4.83111213 7.84393738 7.67720095 10.88070282 6.13228276 7.89422602 5.36953279 10.08850139 9.15046296 9.77195142 NA 11.65917440 0.76068935 4.96235930 9.86963533 6.30570428 5.13923618 9.37101078 6.60872055 6.83111339 NA 14.35775246 1.02375214 9.98713637 -1.56106846 8.97115208 5.74257757 9.02093800 8.57706773 12.001089 4.648247 8.510259 12.533534 10.049369 11.483361 13.390081 11.542903 8.708320 10.730830 14.133317 10.524932 9.071791 9.736286 NA 7.640920 11.744715 10.8203390 7.9002757 9.4493243 9.6831599 8.1633100 10.6378150 5.1392362 7.9485711 10.5102584 6.8311134 1.4387719 8.4667022 5.8767551 10.0745141 10.8513659 8.1920126 7.1322828 11.7615693 5.7963486 13.0223937 10.0754207 11.4089020 9.6068414 11.0783629 8.6961841 10.5690449 8.2003474 0.4388251 8.7157695 6.6914616 12.7188418 7.0048497 10.2838940 10.4310264 6.6137217 14.2058425 10.2307729 10.7573389 12.9827945 9.9180712 9.8305767 3.8982277 TCGA-E2-A1L9 40 0 NA 598 breast stage iia t1c n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 4 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 10.0968767 9.9992162 11.4901404 8.8068966 8.4918964 10.1099521 9.5521715 10.5925114 10.3136798 13.5898338 10.2203056 11.4258873 0.6931412 12.3328720 2.9155400 9.3935942 7.0565597 8.4222086 7.4391086 12.8988459 0.6931412 14.1858005 3.4657394 10.1367888 10.6889217 8.3370108 0.6931412 7.1503982 9.7610369 2.6931635 6.7081044 7.7520481 NA 4.1956547 9.0746976 10.4772440 10.1099521 11.2644331 10.0940340 10.5454239 11.7636109 11.4683532 15.2715370 9.1597001 9.7863520 11.1392039 10.9893059 4.1081899 3.3935947 8.6521903 11.7711941 -0.8919105 11.5884773 5.9410828 6.9123229 5.3078656 10.6938587 11.8260826 10.7933788 12.7051388 12.9732003 7.7339007 11.2050718 10.4865275 11.3007930 10.8732708 3.6931524 11.8400413 10.3658745 -1.8916428 10.5194381 9.0667447 2.5832784 6.0507063 11.2303729 10.5727377 9.8198589 9.6656557 3.0623808 10.0652940 13.5843370 11.3990748 10.1367888 9.7872321 -0.034904 1.006100 1.006100 -0.026714 -0.023977 0.654980 0.128300 -0.028043 -0.028043 -0.026749 -0.026749 -0.024251 -0.031632 -0.031632 -0.031905 -0.034086 -0.034086 0.000000 0.000000 0.129480 0.129330 0.028750 -0.046592 -0.046592 -0.045425 -0.047395 -0.047395 -0.047395 0.114330 -0.034904 -0.034904 0.060936 -0.026714 -0.027124 -0.018765 0.128300 0.128300 -0.028043 -0.028043 -0.033030 0.140580 0.140580 -0.026749 0.478900 0.478900 0.478900 0.478900 -0.031632 -0.031632 -0.031905 -0.031905 -0.034086 -0.034086 0.000000 0.000000 0.000000 0.129480 0.108580 0.032845 -0.054960 -0.046592 -0.046592 -0.031086 -0.047395 -0.047395 0.114330 0.121960 -0.050370 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 0.000 8.76640335 14.03086931 8.02556428 10.27152722 -0.05994604 11.11609530 0.43007113 NA 8.22063129 8.49081599 -1.89164282 8.92113935 3.19566256 10.65219041 8.90179521 0.69314123 8.04777121 9.29678088 7.95837871 9.71967802 9.34963884 7.29306695 11.27419811 3.50050890 7.82415430 10.09332235 4.75204741 NA 10.27780393 3.53446008 12.67430552 12.23699190 8.23876250 10.28124444 10.23618632 9.40166374 4.95368430 2.43012467 0.10822334 -0.30685877 7.61994483 7.81555109 8.88791148 4.37497686 8.12568261 4.82243954 10.41254328 6.00301074 9.36911157 NA 9.89446159 2.80863217 4.44804195 9.97296629 7.00270702 1.91555914 9.32493793 7.91232292 7.02108102 1.27810373 13.88375085 0.43007113 10.40968814 NA 8.70158302 5.57579638 8.09829585 8.83014565 12.637121 5.430121 9.817707 12.332872 10.628074 11.068737 12.898846 11.888424 9.344206 10.319776 13.435499 8.815551 8.652190 8.496209 1.693141 7.792941 10.623892 11.3781952 7.3103156 9.5495800 8.7655105 8.2918273 10.8747665 5.9473950 9.1423031 10.2203056 6.7118184 2.4301247 5.8155524 6.9761815 11.6851487 10.5368139 8.8580615 7.8429015 10.2933772 4.7664043 12.3593615 10.1099521 10.8120955 9.5422989 10.3799468 9.8003716 10.9468050 8.9315593 0.9155591 9.5696151 3.5676185 11.5884773 9.0455658 11.1077411 10.6938587 7.1110073 13.7914608 10.3688176 10.6851487 13.1782291 10.4905459 9.8730635 2.1081899 TCGA-E2-A1LA 59 0 NA 748 breast stage iia t1c n1a m0 female 2009 NA no infiltrating ductal carcinoma 1 NA not hispanic or latino NA NA 1 4 NA NA 1 1 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 7.282743e-07 10.4494674 8.7008225 10.5667095 7.7085170 9.8221038 8.8488082 8.9830164 9.9300319 10.5276632 13.5429139 11.5703033 10.4713406 1.4169478 13.3651471 2.5324416 10.1168240 5.4467095 8.5582179 8.9625704 13.1659938 2.2914267 14.0499576 4.7146412 9.8819029 10.9577362 8.4540517 2.5324416 11.3557750 9.8270603 2.0019103 6.6067872 7.0168751 NA 6.4018557 8.6489834 9.6680501 9.1707363 10.4457894 9.3663028 10.2909191 2.2914267 11.7898275 14.6396315 6.6493668 9.4411786 10.2248539 10.5397903 4.4758566 -1.1681228 8.7818265 10.7100508 -0.1679607 10.8390271 5.0799285 6.7207436 5.3711581 9.8404285 11.6515803 9.4893183 11.4377109 12.4335386 8.8418285 10.9515895 10.3092521 10.8678299 9.6190861 2.5324416 12.2363432 11.4487784 NA 10.2189401 8.6617225 3.3655666 4.8092807 10.3774471 10.2687115 10.6166348 9.6084330 1.1539350 7.7358816 11.8818484 10.9950205 9.4785585 9.4713405 0.02525000 0.60430000 0.00249690 -0.44232000 0.54630000 0.17784000 0.07182200 0.00000000 -0.53053000 0.01642500 0.01642500 1.06950000 0.00013863 0.01391100 -0.13755000 0.46707000 -0.55506000 -0.53378000 0.11038000 0.05722600 0.01782400 1.46650000 -0.54391000 0.49286000 0.49286000 -0.05591900 -0.02562000 -0.02562000 0.07843800 -0.56087000 -0.53073000 -0.02985700 0.02525000 0.05010800 -0.14618000 0.07182200 -0.51373000 0.00000000 -0.53053000 -0.53744000 -0.01367700 0.01293400 -0.53885000 -0.53510000 -0.53510000 0.00194180 0.00194180 0.01391100 0.01391100 0.45990000 0.46707000 -0.51589000 -0.51589000 -0.14989000 0.11038000 0.01964300 -0.52010000 -0.54472000 0.38816000 -0.49996000 -0.54391000 0.49286000 -0.06741400 -0.05591900 -0.02562000 0.07843800 -0.04420700 -0.01931400 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 -0.434 0.000 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 -0.434 0.000 9.3107695 13.0225191 6.6712042 9.6923109 4.7945510 10.7445150 2.4169748 0.8320393 8.7023646 9.0426711 -1.1681228 7.2623270 4.5868848 10.4722448 9.2026873 4.9405239 7.3437525 8.4848450 9.0267566 11.5438819 8.7322478 7.0893880 9.8121394 0.8320393 8.4704356 10.1087060 0.4169478 1.1539350 11.5337395 1.1539350 12.5840669 11.7215038 7.3198401 9.5513887 8.3178291 9.8578316 3.9612807 2.2914267 0.4169478 1.4169478 9.0181142 10.9561212 10.9031270 3.3555661 8.1422720 6.9300324 10.5136776 4.9817476 10.4897649 -0.1679607 10.6731711 2.1539350 3.5324416 9.5919213 7.1451547 7.3942423 8.3750316 8.1651552 10.0365711 -1.1681228 13.9499270 0.8320393 10.3082398 -1.1681228 8.4740515 3.0019283 8.2456278 8.6992785 13.9871711 5.8092807 9.3457275 13.3651471 10.4821541 10.0882085 13.1659938 14.2042188 8.1403390 9.4955581 13.0732383 11.9197942 8.7818265 8.2975661 0.4169478 7.9766581 10.9444394 10.808922 7.327855 9.160675 9.395196 9.016875 9.769182 7.461357 5.831999 11.570303 7.546245 -1.168123 4.854370 7.304366 9.713114 10.582707 8.133496 10.136922 10.419777 7.528967 12.239074 9.170736 10.503541 10.838677 10.407539 9.105795 10.420714 7.108124 NA 8.165468 8.361431 10.839027 6.249853 10.882869 9.840428 7.056918 13.200779 10.133496 10.231812 12.236742 10.672384 9.592720 2.738898 TCGA-E2-A1LB 41 0 NA 2306 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 2 6 NA NA 2 6 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 9.3305313 10.3795248 11.3897069 8.3455543 8.7585977 9.9929134 9.1089776 9.5980892 10.2989791 14.5811587 10.2256283 10.7435539 0.4307135 17.8751763 6.4456208 9.5154793 6.1124958 8.2927919 6.0055796 13.0798523 -1.1542490 10.5365794 -0.1542490 10.0056302 11.0639689 8.7191526 0.8456707 10.7409051 10.0423105 1.1676148 7.6594893 7.9672418 -1.1542490 4.1311120 10.3076993 9.7122147 9.8770651 9.9364825 10.2396352 10.2672474 12.3353056 9.4165130 14.5923540 8.8946993 10.5829516 11.2103903 9.8336830 4.1676389 2.0156403 8.3051402 11.8763756 NA 10.7149167 3.7525987 4.9542335 4.7999058 10.0715184 11.5498282 10.2315709 11.3480430 12.6209072 6.3926025 10.7233760 9.2319481 10.8100493 10.5491795 4.2380225 11.4601883 9.3712293 NA 10.0799271 8.9037002 2.4318636 4.0551609 11.2323793 10.0870958 9.3234667 9.4278504 3.1676309 9.8421819 12.3014209 11.2010595 9.9285228 9.3395639 -0.00185890 -0.00185890 0.00930980 0.00624810 0.00903120 -0.00097017 0.00750000 0.03242200 0.04230700 0.04103400 -0.61508000 0.02356600 0.00249690 0.00235810 0.00597000 0.00597000 0.00597000 -0.00429290 -0.00429290 0.01419000 0.02988800 -0.00069303 0.00221930 3.65690000 0.05840300 -0.03927600 -0.01610400 -0.01560400 0.00638710 -0.00185890 -0.00185890 -0.00110870 0.00027728 -0.03993700 -0.00097017 0.00347070 0.00027728 0.03242200 0.04230700 -0.66901000 0.01140000 -0.64462000 -0.64123000 -0.64236000 -1.29290000 -0.63937000 -0.00380370 0.00235810 -0.67417000 -0.00995650 0.00597000 0.00597000 0.00597000 -0.00429290 -0.00429290 0.59732000 0.01419000 0.02034600 -0.66346000 0.00763920 0.00221930 -0.63680000 -0.01680300 -0.03927600 -0.01610400 0.00638710 -0.00595220 -0.02999400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 0.000 7.6785987 13.0963030 4.5181322 8.7374921 2.5670830 10.8825689 -0.1542490 NA 7.9568442 6.9171704 NA 7.0648775 0.8456707 11.0386177 9.3183993 0.4307135 6.7160731 8.9278574 8.2010594 11.7465752 9.9364362 7.9036999 10.7098946 1.1676148 7.4530385 9.8825689 6.2294130 NA 12.1829122 2.8457108 12.7190564 13.4879858 7.3653443 10.3746509 8.6022646 9.5348328 5.8343927 2.6530600 NA 3.3692710 9.2603936 10.7597198 9.2855393 3.0936278 10.4013569 7.5736290 10.3224547 5.7999058 9.8975971 NA 10.5500444 3.2380225 4.0936362 9.3357771 7.0176358 4.6530658 8.2907234 7.4895646 7.5003448 3.9749881 14.1825288 0.4307135 10.7738567 NA 9.2845003 4.2380225 7.8791317 8.8708480 12.443977 6.194436 9.452114 17.875176 10.798814 11.236146 13.079852 11.113080 9.252976 10.475976 13.068051 8.138030 8.305140 6.697457 NA 8.498553 10.632795 11.166791 5.943741 9.113666 9.129954 7.369270 10.312285 6.518134 8.892832 10.225628 4.131112 NA 3.015640 6.988122 11.363132 10.832617 8.868076 9.589701 9.154047 5.691199 10.114964 9.877065 10.186115 10.095415 9.580418 9.024373 10.462717 8.549612 NA 9.973064 5.716075 10.714917 7.848523 10.103945 10.071518 7.557134 13.738204 10.596415 11.173261 12.163545 10.617198 9.220748 2.305153 TCGA-E2-A1LE 71 1 879 NA breast stage iiic t2 n3a m0 female 2008 NA yes infiltrating ductal carcinoma 27 white not hispanic or latino NA NA 2 2 NA NA 2 6 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 4.161568e-07 8.7288120 9.4192492 11.3371019 8.2010143 8.2856662 10.2098099 9.8106741 10.2082616 11.5146152 14.2362269 9.9244237 10.6366622 0.3450557 17.4757917 4.0820724 10.6628972 6.0639257 8.1286517 5.5283306 11.5474357 NA 11.3586631 5.9300702 9.4221371 10.8505886 6.2679402 -1.2399068 10.3977528 10.3242948 2.5674968 9.0988817 7.2954209 NA 4.6181270 8.5977732 9.4812444 8.8262345 11.0368513 9.6938359 10.4518888 11.7643657 10.0104436 14.8413790 6.5570930 10.6905130 9.8038562 11.6504096 4.8686720 8.3469852 8.0977672 12.6001363 1.3451125 10.7562657 5.8476086 6.3300008 4.6427882 10.5902643 11.7063205 10.7466984 11.7731189 12.6449836 8.0843258 10.2056774 9.3985812 11.0721773 10.5767289 3.8045389 11.4323496 9.4923127 -1.2399068 10.0977672 8.7488298 2.6708856 5.4743906 11.1845740 9.6945733 9.7417125 9.1121887 1.7601358 8.3949565 12.9545943 12.2547509 9.4120939 10.4352202 0.5208300 0.0029133 -0.6041300 1.0272000 -0.0209610 -0.0051227 0.0384890 -0.0042929 -0.5352000 -0.5306400 -0.5306400 0.9657600 0.0048579 0.0098669 -0.5263400 0.0065342 -0.0038779 0.0390540 -0.0022168 0.1052600 -0.5290000 -0.5376600 0.0304510 3.6569000 -0.0099565 0.5308100 -0.5109400 0.0081959 0.0207630 0.0219790 -0.0030475 0.4432500 -0.5362200 0.0239870 2.1416000 -0.0181080 -0.0223320 -0.0042929 -0.5411800 -0.5466300 0.5535400 -0.0161540 -0.5156800 -0.5190700 -0.5114600 0.0130740 1.1029000 -0.0085704 0.0158660 -0.5512600 0.0065342 0.5410100 0.5711300 -0.0100940 0.0058309 0.0084743 0.0589990 -0.5390600 0.5514200 0.0555150 -0.5087700 -0.5095000 -0.5255300 0.5818400 -0.0310860 0.0383470 0.5159400 -0.5177400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 0.000 9.1748306 13.7252080 2.2195867 9.9567474 4.4100493 12.5108522 1.5674968 -0.2399068 9.3554029 8.2619825 NA 7.7162893 5.9598165 11.3842553 9.3803652 0.3450557 9.1055505 9.0513161 9.9092572 10.5610452 9.0848097 7.1438495 12.3821971 2.5674968 7.6458414 10.1022200 4.5675029 -1.2399068 10.6154031 3.6181212 13.2049014 13.0278830 8.3895019 9.2439611 8.5898680 9.9231660 3.4605853 3.3451125 1.0820894 3.4605853 9.4076036 10.2604892 10.1460077 6.2195771 10.4168695 9.2103255 9.5946163 6.0175322 9.0513161 0.3450557 10.7399277 3.6181212 4.9098931 9.6607479 5.9004128 3.3451125 9.7143415 9.1642224 5.2993033 2.2195867 13.8347049 3.0820724 11.0848884 NA 8.7172473 7.1779975 7.6967833 9.4999258 11.6491890 6.9647163 9.3646985 17.4757917 10.4670729 10.4897660 11.5474357 9.3366295 9.5787274 10.0679154 12.5805237 8.9622691 8.0977672 7.1905981 -0.2399068 7.4183569 11.0131063 12.007479 7.283707 9.760145 9.476965 8.017604 11.240938 7.922537 8.854223 9.924424 8.113292 -1.239907 7.754499 8.455600 11.928661 11.015469 7.303177 9.878438 8.068484 5.988964 11.969687 8.826234 9.914330 10.464049 9.587488 10.805222 11.376005 7.981732 9.330950 10.386995 5.360059 10.756266 7.580324 12.161825 10.590264 7.271898 13.967693 10.326675 10.482953 11.759793 12.657424 10.078688 1.930056 TCGA-E2-A1LG 50 0 NA 1523 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 5 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2.878418e-06 1.075072e-06 10.5260185 10.8355733 10.8949518 9.2540013 8.4402824 9.8165356 10.2231953 10.6092150 10.9439079 9.9285311 11.2148308 11.1110812 0.2968979 13.2472274 2.1042696 9.4836326 2.6892097 7.9116089 7.7522268 1.7563402 NA 7.2968997 7.4842517 8.9262560 11.4013343 5.7887536 1.9973285 10.9355615 10.8280370 -1.7032196 9.7827286 8.5305191 NA 3.6892209 9.3025238 11.1730325 8.4755640 11.3871772 9.0872477 10.9798939 -1.7032196 9.5589942 14.2651161 6.6129540 8.3467477 10.9984224 11.2503682 3.4261842 -1.7032196 9.4093387 12.3390716 -1.7032196 10.8440349 3.6188260 6.2798928 3.8204649 7.2127785 12.4377291 9.9732971 12.4745524 13.3118351 4.3629888 11.4098274 11.1825957 11.6675867 10.5486775 4.1297858 11.7416554 11.8448783 4.1795429 8.9816480 8.4210204 2.4692348 3.4668229 11.3301502 11.3727127 9.8639047 9.0179984 -0.7029847 12.4514801 14.2328700 10.8157983 9.5507468 9.0945607 -0.49113000 0.36571000 0.40925000 0.44102000 0.44102000 -0.49257000 0.46363000 0.39099000 -0.43790000 2.01860000 2.01860000 1.55160000 -0.48787000 -0.48787000 -0.00652360 -0.00652360 -0.00652360 -0.01355800 -0.01355800 1.57330000 0.37707000 0.03917600 -0.49508000 -0.00056727 -0.00056727 1.33360000 0.35183000 0.35183000 -0.01252800 -0.49855000 -0.49113000 -0.01499200 0.44102000 -0.49257000 -0.48514000 0.40692000 0.40692000 0.42181000 -0.43790000 -0.43790000 0.00136810 0.00136810 -1.05190000 0.01291500 0.00775960 0.00775960 -0.00517010 -0.48787000 -0.50379000 -0.00652360 -0.00652360 -0.00652360 -0.00652360 -0.01355800 -0.01355800 -0.49017000 -0.97068000 0.37707000 0.03917600 -0.48828000 -0.49508000 -0.00056727 0.00000000 -1.01370000 0.35183000 -0.03886800 -0.04646600 0.42837000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.495 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.000 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 0.391 -0.047 0.000 0.000 -0.482 -0.482 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.495 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.000 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 0.391 -0.047 0.000 0.000 -0.482 -0.482 0.000 0.000 0.000 0.000 6.8007252 12.4828587 6.4867240 7.4618060 2.9407494 9.1780132 -0.7029847 1.1042696 7.9189509 13.8931473 6.9693244 7.4542466 7.3683615 10.5299197 10.6969782 1.9973285 2.1042696 9.5507468 9.3412933 9.6378620 8.1417776 8.1977661 10.1490387 NA 10.7547932 9.4421946 NA NA 10.1867834 2.4668359 13.4027669 12.0816364 6.8476462 10.1791602 9.7547932 10.1364968 2.4668359 1.8818604 -1.7032196 7.7624658 10.2877124 9.6762776 7.1266219 3.2968979 7.8656535 6.6367493 10.3354754 8.3670202 10.2866485 NA 14.9280337 0.6188025 5.0782597 10.1085671 7.0777344 5.5257181 6.4364500 7.6784424 8.3330730 8.6478387 14.2679039 -1.7032196 9.7897539 NA 7.9710917 3.4261842 7.3949317 8.7377685 13.457745 7.530519 8.048443 13.247227 12.347870 12.100627 1.756340 9.390977 9.325496 10.552518 13.821716 11.793628 9.409339 4.618826 1.104270 7.885614 10.934203 9.837996 7.920781 8.428756 8.769590 9.045092 10.451863 5.011147 2.881860 11.214831 10.378383 NA 6.710527 7.753418 11.251823 10.292313 9.329634 8.557819 9.013719 5.843793 10.593793 8.475564 11.397890 9.708940 12.177439 10.421021 10.753254 10.101030 9.581723 9.636888 7.413243 10.844035 7.549564 11.145718 7.212778 7.501470 14.124639 11.032667 12.593600 12.694373 8.785744 9.334446 2.296898 TCGA-E2-A1LH 59 0 NA 3247 breast stage i t1c n0 m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.676051e-06 9.363527e-07 10.1419125 8.5539905 9.8705765 6.9023365 8.7632037 9.4351768 9.1300384 10.4701337 13.1223174 13.1706941 10.5753098 9.8344470 1.9481523 12.2774886 2.4335738 11.0007088 7.6923016 8.6678719 9.9139250 5.7554965 NA 7.9116149 4.8356664 10.3845857 10.5687271 6.3541330 1.2111991 10.5420920 10.0743289 2.7961409 8.4206285 6.3127124 NA 7.2261251 6.9481406 10.4803018 8.9093009 9.4511713 8.4075724 9.6692399 2.6262055 6.4841929 15.3035469 7.2453321 10.2464324 10.0794832 9.6374398 4.2700654 -0.3737011 8.2736711 9.6746995 1.2111991 10.3558334 5.4335671 7.2186698 4.6706081 9.5195142 11.3344344 10.2500941 12.4804966 13.0443287 7.3676795 10.9196843 9.7683197 10.4724866 10.4383900 3.2111680 11.1658561 8.5833145 2.6262055 10.2646486 9.2149272 3.6262172 5.1180648 11.3511527 9.5934389 9.8048775 9.6077799 0.6262055 5.6262113 11.9113258 11.1764784 9.1260586 9.5789538 0.2364300 0.6912900 0.4585400 -0.0282910 -0.1163900 -0.1524700 0.2769500 0.0073609 1.8240000 -0.4271300 -0.1560500 0.9946800 0.6642000 -0.1485800 -0.1212100 0.3386900 0.0178240 0.3246300 -0.1557400 0.6419400 0.3739700 0.4064400 0.0000000 0.0000000 0.0000000 -0.0839970 -0.0839970 -0.0839970 0.4307500 -0.0125760 0.2364300 -0.1626800 -0.1458000 -0.4338700 -0.4304500 -0.1531100 -0.1531100 0.0073609 0.2939000 -0.2063500 -0.0610880 0.1795000 -0.0754780 -0.1582200 -0.1582200 0.1544200 -0.1491300 -0.1485800 -0.1473400 -0.1987500 0.3386900 0.0178240 0.1888900 0.3246300 -0.1557400 -0.1557400 0.0013868 -0.1555400 -0.1270700 -0.1954400 -0.1504200 0.0000000 -0.1724600 -0.0839970 -0.0839970 -0.4546900 0.4669000 0.4285600 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.156 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.136 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.732 -0.158 -0.158 -0.152 -0.050 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.156 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.136 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.732 -0.158 -0.158 -0.152 -0.050 9.8929992 13.7025272 1.6262055 9.1399401 4.9116149 12.3950172 5.2409210 6.2700692 9.1100283 8.5480536 3.5331023 7.8550310 3.0856456 10.8471954 9.4479866 4.9116149 9.0249562 10.9173833 6.7759592 9.4575198 7.0433051 6.4335671 11.3477391 1.2111991 9.0897370 10.7930033 5.8741404 NA 10.6733366 3.0856456 13.4139112 13.3291428 7.6205659 9.9231288 9.9104584 9.6402330 3.7961409 3.6262172 NA 0.6262055 8.5745799 11.5539905 7.3943967 4.2111758 9.2524691 8.0012522 9.1960682 5.8550304 10.0408979 1.9481523 11.5327275 2.6262055 5.1180648 9.4526817 7.9452524 8.8307836 8.9093009 8.5833145 11.1295415 3.7136738 13.9408667 -0.3737011 10.2637431 NA 9.5285877 4.9481429 7.8011386 7.7242444 12.456217 5.670608 8.597756 12.277489 9.708362 10.603493 5.755497 11.578954 8.295098 10.054573 13.047752 9.539102 8.273671 8.251922 1.626205 7.845381 11.104477 10.176959 3.626217 8.773417 8.401000 7.916231 9.455650 8.326652 6.692302 10.575310 7.196068 NA 9.589109 8.649274 10.887132 10.724245 7.394397 9.882421 5.966064 9.266457 11.411694 8.909301 10.418189 10.631135 11.141912 10.756783 10.215864 7.407572 NA 9.430602 9.957129 10.355833 5.149776 11.208355 9.519514 7.234578 13.976185 10.847800 10.916231 12.123066 11.294654 8.913925 4.580411 TCGA-E2-A1LI 57 0 NA 3121 breast stage iib t2 n1 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 10.349489 9.026064 11.476777 8.759200 8.622897 8.675796 8.729890 10.978301 12.266665 13.037298 11.124103 10.835675 4.455169 12.431665 2.788915 10.747648 4.569126 8.727847 9.977872 5.796725 NA 9.125656 7.141862 9.730350 11.300487 7.796726 1.435255 9.264640 10.813926 0.587269 8.358102 6.415091 0.587269 5.072698 8.657662 10.623721 9.543213 9.479664 9.965351 11.011649 3.309744 7.885565 15.092911 8.868887 10.584732 10.978946 10.172986 3.819934 -1.734563 9.594019 10.129144 -1.734563 10.072297 4.309736 6.596261 6.691610 8.389466 12.162150 9.834251 10.324351 12.926733 7.911003 11.356945 10.741106 11.766933 11.411118 3.513276 12.277445 7.900156 5.046705 10.065031 10.897204 4.172720 4.242625 12.136672 11.349655 10.211154 10.781044 -1.734563 5.276571 12.341492 12.265609 10.032288 9.576525 0.1557700 1.3219000 0.7638900 0.0721090 0.1266800 -0.1930800 0.1563600 0.8566000 0.0803120 -0.3820100 1.2389000 0.8643300 1.2423000 0.6629000 -0.3245100 0.0079845 0.0079845 0.1188800 -0.2539400 0.5424900 -0.2713500 1.0126000 -0.1242100 -0.0631660 -0.0631660 -0.0131270 -0.0131270 -0.0603450 0.2129900 0.1557700 0.1557700 -0.1017100 0.1266800 0.1644500 -0.2172000 -0.3065100 -0.2976800 0.8566000 0.0803120 -0.4815500 0.3370700 0.0010663 -0.3775700 0.2044200 0.1977100 -0.2534600 -0.2534600 -0.1869700 -0.1869700 -0.3245100 0.0079845 0.0079845 0.0079845 0.1188800 -0.2539400 -0.2539400 0.0353830 -0.2713500 -0.4855900 -0.0120240 -0.1242100 -0.0631660 -0.1145500 -0.0131270 -0.0131270 0.2154500 -0.0866510 -0.2420400 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 0.000 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 0.000 7.8928785 12.4823177 2.4352819 8.7309109 3.5132760 12.7755524 2.8502994 4.9235581 9.2890990 6.4252159 6.3997710 7.7370195 5.2877124 10.9123532 9.3797377 4.3097364 7.4100027 11.7094536 5.7810449 8.8418288 9.7754411 7.1752372 10.9335647 1.5872690 9.0982345 10.2737732 4.9518442 NA 10.6395690 2.5132633 13.0156328 12.4592549 9.5895251 10.4956653 11.6220716 9.4594857 3.2653469 2.3528150 -1.7345631 0.8503194 8.7501673 8.9570881 7.0791253 1.2653169 8.3554969 7.9709767 10.2593444 5.6228952 9.9885789 3.5507529 12.0837270 1.2653169 5.7967249 10.0910984 6.2604905 6.4747978 8.6926573 7.5484328 8.5940196 3.7247812 13.7413313 2.5132633 10.5135686 0.8503194 9.5536339 8.5940196 8.4327628 8.0966519 8.871083 8.896522 8.270969 12.431665 10.819694 11.527880 5.796725 12.234191 8.540305 10.765938 13.745945 11.363048 9.594019 8.311104 3.072706 8.622897 11.609224 10.242625 8.413821 9.699973 8.763196 9.369288 10.238708 5.691610 6.712428 11.124103 10.563980 NA 9.032701 9.463213 12.124394 10.208958 8.123326 7.794775 7.437772 7.689511 11.456495 9.543213 9.998784 10.096652 11.351315 10.764692 10.693181 9.050797 NA 9.823531 8.216629 10.072297 6.196082 10.662217 8.389466 7.921770 14.750262 10.502256 10.793066 12.672147 11.227518 9.081528 3.020235 TCGA-E2-A1LK 84 1 266 NA breast stage iiic t4b n3a m0 female 2008 NA no infiltrating ductal carcinoma 11 black or african american not hispanic or latino NA NA 5 5 NA NA 2 5 1 6 2 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.855162e-07 9.7577137 7.7069477 11.0465977 8.8642097 9.3682055 7.5531424 9.7800363 9.7819611 12.4383813 13.4577771 9.5166166 9.7557560 2.5531393 12.9215398 2.0385767 11.6926938 6.8385447 8.1619517 11.5438137 3.6906406 NA 7.6658425 8.0577627 9.6710453 11.6914143 5.9177158 -0.7688134 9.6170768 10.9238299 5.3397396 7.4791416 8.5909639 NA 1.8161901 8.7210623 9.2756084 9.8320564 8.4185665 8.8180542 10.0457968 0.8161491 7.3026764 14.4982205 8.3177486 10.6972908 11.3872974 10.9890210 3.7547806 NA 8.8532662 9.0641044 NA 7.0891952 4.8750723 5.2756068 3.9861014 8.9177149 11.3292465 9.4803277 12.0142126 11.7740044 6.2864968 10.5827058 9.9264426 10.5401221 10.5480615 4.2312173 11.2167006 11.0597476 -0.7688134 10.5793892 11.2660133 2.2401922 3.4011389 8.3345021 8.6469561 10.5531425 11.3302333 2.5531393 7.8786726 12.7135181 12.4089453 9.2878520 9.1926642 0.0036076 1.3683000 -0.3711000 0.0863770 0.0863770 0.0227250 0.1766400 -0.0657160 -0.0969680 3.6455000 3.6455000 3.2894000 2.0685000 -0.2289600 -0.6141100 0.5320400 0.5320400 -0.2752300 -0.2752300 -0.6223600 0.0000000 -0.2860800 0.1805600 0.1805600 0.1805600 0.0269350 0.0269350 0.0269350 0.2752100 0.0036076 0.0036076 -0.5471800 0.0863770 0.0227250 0.0620800 -0.4399400 -0.4281100 -0.0657160 -0.0969680 0.5606300 0.0284810 0.0284810 -0.5347000 -0.3851500 -0.3851500 -0.3851500 -0.3851500 -0.1791700 0.1380600 -0.5559700 0.5320400 0.5320400 0.5320400 -0.2752300 -0.2752300 -0.2752300 -0.6223600 0.0000000 -0.3007500 -0.2486100 0.1805600 0.1805600 -0.2230500 0.1462200 0.0269350 0.2752100 0.5521300 -0.1009200 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 0.000 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 0.000 7.0191170 14.0515429 -0.7688134 7.8678390 2.8125598 10.5576439 -0.7688134 6.3397396 8.4036418 10.6100511 1.2311866 6.6824258 5.0385679 11.4342564 9.3133633 3.3186784 1.5531639 10.8921017 5.9036409 10.1320812 9.3623767 6.7069477 11.2142079 0.2311866 9.4980009 9.8696503 6.4111228 NA 10.6637563 8.4956568 13.2882754 13.1852289 4.4406666 9.5542692 9.8929925 9.9667705 6.3707659 0.8161491 NA 3.2312173 8.1229983 10.5688363 5.5349954 2.0385767 10.0423884 7.4210390 10.9919343 6.7625960 10.0409825 3.6235274 11.6522272 2.0385767 4.6906462 10.3799896 8.8084732 0.2311866 7.3860323 7.4743882 3.4011389 12.4853572 13.3985541 -0.7688134 10.7320562 1.5531639 11.2871746 1.5531639 8.3707659 7.9557284 10.796669 9.116911 9.189767 12.921540 8.866914 9.852351 3.690641 10.978148 9.278338 10.012574 13.179947 11.996500 8.853266 7.460033 4.138102 8.544097 10.986102 10.6559055 5.9177158 8.5643698 8.9142090 8.4791420 9.4822469 3.4011389 5.6406065 9.5166166 10.3338462 -0.7688134 8.6720834 8.3266376 13.1188158 9.1214786 8.9149636 8.9036397 7.0191170 3.0385767 11.6164620 9.8320564 10.0117542 11.1575103 11.2803823 10.4327257 10.1810410 9.2269815 6.4308874 10.1153544 2.8161696 7.0891952 3.4791400 11.0477981 8.9177149 6.9861014 14.1688640 10.7939338 11.1115632 14.2677314 10.6078824 8.7469143 NA TCGA-E2-A1LL 74 0 NA 1309 breast stage iiia t3 n2a mx female 2008 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 8.8528662 9.0584783 12.0034986 9.4360308 7.8072364 10.2197218 9.3672597 10.6742688 11.7180774 13.3567661 9.2064249 10.6594508 NA 11.3351453 3.3735369 10.4014409 5.9178566 8.6712155 10.1089969 10.2930604 NA 10.5732072 3.9584994 9.8694521 11.1086208 2.3735369 1.2036397 7.5119487 11.5261014 2.9040409 8.1780244 10.7495396 -0.7963603 3.5959333 9.7408283 10.4878556 9.4913222 9.5578592 8.6256745 10.6209350 2.7885813 7.6671343 15.9859683 7.0121239 10.5970003 10.6563660 8.4727367 2.9040409 1.5255177 9.2656561 10.8892347 -0.7963603 11.7425263 2.3735369 5.1578077 2.5255427 10.3418817 12.0635329 9.5764749 11.7591577 12.5855584 6.4515375 10.5970003 10.0724325 11.1581697 10.9276974 4.7271744 11.6967148 8.7829258 NA 11.2259777 8.7543567 1.7885604 5.9178566 8.9551541 9.8044520 9.7753625 8.3660013 0.2036397 6.7193094 14.2399982 12.8289763 9.3042721 9.8007314 -0.00013862 0.06866500 0.04004400 -0.29520000 0.31528000 0.05893700 0.36637000 0.23566000 -0.28575000 -0.28299000 -0.28299000 -0.27236000 0.00000000 0.00917050 -0.01409000 -0.33237000 -0.31638000 0.75681000 0.07239600 -0.29023000 -0.27547000 0.30969000 -0.32065000 -0.31809000 -0.31611000 -0.02219500 -0.02219500 -0.33318000 0.25762000 -0.05401600 -0.34458000 0.02918400 -0.29863000 -0.02739800 0.04749000 0.25798000 -0.69577000 0.23566000 -0.67802000 -0.30921000 0.30441000 0.06494000 -0.69033000 -0.29591000 -0.96186000 0.27884000 0.44122000 0.00917050 -0.04939900 -0.67921000 -0.01409000 -0.27212000 -0.29851000 -0.27140000 -0.31132000 0.27300000 -0.29071000 0.31691000 0.16265000 -0.15541000 -0.33329000 -0.31809000 -0.29851000 -0.22281000 -0.33318000 0.02890300 -0.30075000 0.04429000 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 0.000 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 0.000 6.8329659 13.4150420 6.5164927 9.0365000 1.9776096 10.0608133 -0.7963603 4.5255365 9.1722767 8.1490535 NA 7.0862530 1.7885604 11.3075534 9.3016421 0.2036397 5.1578077 10.0317464 11.9630820 9.0221922 10.0236852 6.3328923 11.5437382 NA 6.2259786 10.5390003 3.2036084 NA 10.6615038 3.9584994 12.8035228 12.6437004 6.4515375 8.7074358 9.4106241 8.5829883 2.3735369 0.2036397 -0.7963603 NA 8.6813681 9.8936079 6.1105011 6.7427689 8.7601158 7.7466420 9.0506671 6.4703969 9.0724325 NA 10.5770189 5.5786489 1.5255177 10.4834003 7.0603468 3.4515408 8.8970970 6.5255380 5.5611611 7.2480044 14.2652342 NA 10.9157069 NA 10.2036098 4.5959273 8.5232820 7.2036103 12.713509 7.777257 8.895354 11.335145 9.505106 10.495932 10.293060 12.683516 9.010965 11.443507 13.389879 12.277082 9.265656 8.086253 NA 7.403282 10.627776 11.2456112 5.4703969 9.3634812 9.9169964 8.9252218 10.1689468 4.2480034 5.6130012 9.2064249 2.7885813 6.6298753 8.4843807 9.5408638 13.7515286 8.8813297 8.7516227 9.4797344 8.9281236 4.5611611 9.2270315 9.4913222 10.8415932 9.8953534 10.1679507 11.6760469 10.7232462 9.0755152 8.2370330 8.8213527 4.5959273 11.7425263 3.2910731 11.0249853 10.3418817 7.3225510 14.2564326 9.9955867 9.8848484 11.9057826 10.7791491 10.0213930 -0.7963603 TCGA-E2-A1LS 46 0 NA 1604 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white NA NA NA NA 5 NA NA 2 5 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 4.855162e-07 10.273489897 9.194968812 11.061125839 8.332360195 8.339065213 9.676518305 9.870265916 11.009171559 10.038990437 13.108496981 10.777053735 10.614311944 4.586404475 10.587814075 2.460873593 8.421403414 7.171367976 10.996857238 11.523043836 8.289155737 NA 10.425084638 6.358995736 8.843793888 11.150555425 7.582644061 0.001441974 6.220612429 10.450075986 1.323370069 7.012670347 7.309782823 NA 3.645298164 9.072905676 9.469048949 9.258831230 10.091555848 10.264712582 11.684438004 -0.998558026 5.659656311 14.089113429 8.798991434 7.166349905 10.410834394 9.080928090 3.393759397 NA 8.874887623 12.489785707 NA 10.235063087 1.808796896 8.284531715 2.808796896 10.206625765 12.375803705 9.724250870 13.054690541 13.066691242 7.893226891 12.102762572 11.677883191 10.848109065 10.838282752 3.785948049 12.052652341 9.518128301 3.808796896 9.480213008 9.678281989 4.249369488 2.586404475 10.819626116 10.020338984 9.241041934 9.296064100 0.001441974 9.230262106 12.541329219 12.210744451 10.421403625 10.266472322 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.736152948 9.755495844 7.497298598 8.550265422 1.388244653 13.181119296 -0.998558026 -0.998558026 8.438154764 10.591094524 4.673867316 9.484926789 5.920307594 10.538176319 8.971549302 NA 7.752987371 10.716547441 9.325623870 8.945423352 8.919113899 7.062138985 9.468029738 1.001441974 9.191268014 9.471085214 3.088904815 NA 8.868722257 7.206014096 14.363010300 13.152697847 7.701883078 11.247293170 8.208457758 9.407648467 2.171366976 0.001441974 0.586404475 NA 7.952727854 8.001443663 7.056725493 3.460873593 11.229155641 3.586404475 9.472102270 7.473118813 9.622579552 1.808796896 12.729044846 0.586404475 7.300651823 11.294297025 7.168661088 0.586404475 6.984436688 6.859424212 0.001441974 NA 15.154302594 -0.998558026 10.621663265 NA 5.088904815 6.341293756 8.949810665 8.546407950 11.853505 6.525005 9.480213 10.587814 10.650700 11.974603 8.289156 11.148012 11.160943 11.108987 13.617418 11.661439 8.874888 8.990128 NA 6.715689 11.691005 10.703616 5.859425 8.756331 8.942491 6.827992 9.621031 3.586404 4.210895 10.777054 7.220611 NA 9.654288 7.751547 12.917603 10.440235 7.125564 7.456771 8.617992 3.586404 12.049833 9.258831 10.500791 8.595768 12.298073 9.379738 10.658762 7.834333 NA 8.307779 4.525004 10.235063 4.645298 11.567022 10.206626 7.099475 14.476734 10.809603 10.539147 11.875272 9.508247 9.778699 2.701882 TCGA-E2-A2P5 78 1 821 515 breast stage iiic t2 n3 m0 female 2011 NA yes infiltrating lobular carcinoma 21 black or african american not hispanic or latino NA NA 4 2 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.046104e-06 7.282743e-07 9.4597541 9.4118145 11.3284734 7.2810565 8.1401058 8.8602691 10.1734128 9.8014714 11.2565318 8.7526446 10.3330474 10.5793789 0.8921967 12.0780448 1.8921967 8.9689939 6.8876630 8.8014714 9.0651056 13.5228094 -0.4297314 14.1646914 3.0938137 9.5571374 11.6290875 7.8134240 2.9625675 9.4102412 11.2663483 2.4771333 9.8235067 5.8740297 -1.4297314 4.2141093 8.9838780 10.1006564 9.3880332 10.2685207 9.4771408 10.2208531 13.6419220 10.8556524 14.9535663 6.9710020 10.6437223 10.5142301 10.2943376 5.2706896 2.9625675 8.1589646 10.4894859 -0.4297314 11.0871813 6.3049600 4.5926185 4.2706934 9.6125936 12.0936896 10.9620308 10.6504014 11.6616855 7.1016312 11.0616022 10.2195063 10.2400210 10.4650679 3.7797010 11.4690405 11.7187267 -0.4297314 10.4007654 9.2896390 3.2561955 4.1849626 11.5403561 9.3614131 9.4688515 9.7894187 3.4771463 9.1064972 13.1185302 11.7597659 10.4352101 9.8411295 -0.4509000 0.5620500 0.9407800 -0.0032237 -0.0085766 -0.0127130 0.5350300 0.4935500 0.4496900 0.8071400 0.8071400 3.6569000 0.4761800 0.5082800 0.0022193 0.0535100 0.0535100 0.4894000 0.4894000 -0.4973600 0.4705500 -0.4736100 -0.4214500 -0.4214500 -0.4561800 0.0989970 0.0380720 0.0690950 -0.4376700 -0.4509000 -0.4509000 -0.3904000 -0.0032237 -0.0127130 -0.0325870 0.0068044 0.0272160 0.4935500 0.4496900 1.0063000 0.0454240 -0.0139530 -0.4928500 0.5434700 0.5434700 0.4247300 0.4770100 0.5082800 0.5082800 0.0022193 0.0535100 -0.4520100 -0.4677600 0.4894000 -0.4934000 -0.4596100 -0.4973600 0.4705500 -0.4526400 -0.4439400 -0.4214500 -0.4214500 0.4670700 0.1435500 1.0591000 -0.4376700 0.4102800 -0.4107200 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.453 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.327 0.807 0.477 0.477 0.000 0.000 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.453 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.327 0.807 0.477 0.477 0.000 0.000 8.0879194 12.5926180 6.8038702 9.8252787 1.0427144 11.7916862 0.5702686 -1.4297314 9.0780448 9.5237192 0.8921967 7.5702504 1.1552311 10.0038356 9.4972872 2.0296649 7.3417394 8.9561124 9.4913473 11.5760501 9.3048074 6.4467674 11.1613049 0.8921967 9.6119093 9.7924412 4.2426787 NA 10.7373546 1.8921967 12.5307047 12.2781485 7.2284618 9.9647128 7.3936170 10.0795303 3.4282362 0.1552311 -1.4297314 6.6839925 9.5105638 10.1936744 9.9785799 2.6577086 10.2525644 8.9668549 10.1678372 5.6891901 8.5229914 NA 11.5842706 3.4771463 5.1996056 10.1949359 7.3925338 -1.4297314 8.7501593 7.2532443 8.7174550 0.5702686 14.4939490 -0.4297314 10.5688406 NA 7.1438974 6.3646652 7.9561124 8.7514025 12.583602 5.910099 8.401558 12.078045 9.325138 11.467150 13.522809 10.547530 8.757602 10.330138 12.794176 12.480612 8.158965 9.386434 2.270678 6.683993 10.602640 11.687731 5.883132 8.286212 9.496546 8.242675 11.676095 6.351611 9.289639 10.333047 7.037856 1.155231 6.390429 7.752868 9.575173 10.425119 8.889922 9.505415 10.197784 3.570244 11.233895 9.388033 11.168303 10.537476 10.876312 10.310031 10.793347 7.573065 10.966587 8.930022 3.892177 11.087181 6.155213 11.194589 9.612594 6.855652 13.901552 10.131061 10.068102 11.942707 11.750936 8.979641 1.892197 TCGA-E2-A2P6 77 0 NA 1051 breast stage iib t2 n1 m0 female 2011 NA no infiltrating lobular carcinoma 1 NA hispanic or latino NA NA 3 2 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.982457e-06 1.491228e-06 9.8405518 9.0171330 10.6534832 7.6456231 8.4223894 9.3437325 10.4370362 9.3729721 10.9672987 9.7348649 7.6581786 9.9302487 2.7336797 13.3622205 3.0707156 8.7803721 6.3866178 8.6033945 9.4216531 13.0865355 0.8076846 14.1950238 6.5356004 10.0784374 10.8292148 6.0171336 1.0707328 9.2473026 7.7548782 2.8076846 6.9695673 5.7986338 NA 4.1861915 9.5136575 10.0758706 10.5143483 11.4419461 8.9057116 10.7708646 2.7336797 10.6758848 14.3610209 7.2831208 10.2179189 9.9078162 10.3649518 5.2272174 7.4253309 8.0014515 11.9524652 3.3926471 11.1654515 4.0707156 5.4399489 4.6354990 10.1550794 11.9068959 10.5910053 11.5198626 12.9885211 8.7000707 10.0893778 9.8699955 11.4414014 10.0326460 3.7336797 11.5408644 5.6952060 0.4857359 10.1439630 8.5718876 3.8506694 4.7711514 9.7659423 9.8667536 10.0907680 9.8640464 1.9451957 10.3472262 12.5860031 10.8509803 9.6976397 10.1345584 1.14550000 1.44330000 1.45580000 0.00083195 0.00083195 0.00000000 -0.00750250 0.00000000 -0.01106000 -0.02005300 -0.02005300 -0.03885000 0.00180300 0.00118960 0.00944910 2.60340000 1.81400000 0.00235810 0.00235810 0.00944910 -0.00110870 0.01656500 -0.01271300 -0.01271300 -0.01271300 -0.00480840 -0.00480840 -0.01064600 0.01558700 -0.87813000 0.00346870 -0.02034200 0.00083195 0.00000000 0.00000000 -0.00750250 -0.00750250 0.00000000 -0.01058700 0.01908300 -0.00968060 -0.00968060 0.03792400 0.01852300 0.01852300 0.01852300 0.01852300 0.00118960 0.00118960 0.00944910 -0.87143000 -0.85385000 -0.87060000 0.00235810 0.00235810 0.00235810 0.00388540 -0.00110870 0.01656500 -0.86876000 -0.85019000 -0.01271300 -0.67039000 0.01544700 -0.00480840 0.01558700 0.02160300 0.03157700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5039517 12.2265863 3.6952032 9.3499376 -0.8094483 10.4034965 0.0706641 NA 8.6393034 7.8672942 -0.5141610 6.6098731 4.5518420 10.1709383 9.9046583 5.7525372 6.6755760 9.4231254 11.1678683 11.0004655 9.3543349 7.5679006 10.8009010 3.3926471 9.2456397 10.0603449 2.1861836 3.7336797 10.9984919 3.9451863 11.9248032 11.6296129 7.1861915 10.1550794 8.5219251 9.4666051 1.2931350 2.0706984 NA 5.5942768 8.8737686 9.6780443 11.2603326 3.9120175 10.1940983 7.1827191 9.7277347 5.2539363 9.6927658 -1.5141610 11.2685450 -0.5141610 4.5301457 9.5289565 7.5516521 4.0403401 9.7997681 8.2439746 7.0479942 0.0706641 13.8073625 0.0706641 10.1291568 0.8076846 6.1078029 5.6456239 7.4801051 8.8289371 14.5551058 5.5410346 8.6878753 13.3622205 10.5735027 10.8812856 13.0865355 12.9763517 10.2433456 9.8802141 12.8987843 8.7757703 8.0014515 8.5639021 0.0706641 7.4885664 10.9469751 11.1526412 5.3186422 8.7384169 9.1205624 8.6494010 10.0654210 7.5136573 5.9203791 7.6581786 8.3296726 0.4857359 4.6755788 7.6573034 8.9451831 10.6771192 6.6201773 9.5403557 9.9307663 5.1581754 11.1427773 10.5143483 10.7437285 9.6066373 10.8710746 9.5798292 10.6024203 6.8121812 NA 8.5352598 5.3312430 11.1654515 5.5301457 11.3458685 10.1550794 7.5864135 13.5937527 9.6443612 9.9705743 11.9093927 10.6872628 10.2712040 -1.5141610 TCGA-E2-A3DX 43 0 NA 1325 breast stage iiic t2 n3 m0 female 2011 NA yes infiltrating lobular carcinoma 25 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 10.9409088 10.0288287 11.8531737 10.3868129 8.2802966 9.3372236 10.9481898 9.6308230 11.1741256 10.8290767 10.5830404 10.5410959 3.4474073 14.6289973 3.4043446 10.4304001 7.7108829 8.6591518 8.0464441 12.3888857 3.7862095 12.0559331 6.6728270 9.8475125 9.6716920 5.9598559 0.3599709 9.8162981 8.7565483 3.4474073 9.1761273 8.0376634 -1.6402540 6.4420926 9.9312222 10.9686605 9.9538016 11.9192013 9.7003502 11.5365843 9.6493862 10.9197987 15.4081006 8.6296550 9.8917881 11.7489027 11.2735811 5.6078718 3.1672937 9.5791122 12.1192077 -1.6402540 11.4174278 7.2085670 7.5248504 4.6818709 10.3557108 11.6650079 10.0136845 13.7486673 12.8497289 7.9561333 10.8155278 10.5636037 11.1365823 11.5704628 5.5596172 11.9080431 10.6928194 0.6818540 10.4169201 8.9126127 3.5895358 8.0394236 10.2077840 9.9174074 10.6874963 9.7867326 3.8835035 9.3104996 12.9189024 13.2880456 9.9943010 9.7597556 -0.00771790 0.27490000 0.27490000 -0.00055444 -0.00507400 -0.00490110 0.00000000 -0.00110870 -0.00110870 0.01279500 0.01279500 0.01279500 0.00032584 0.00032584 -0.00346270 -0.00346270 -0.00346270 0.00000000 0.00000000 0.00013863 -0.00235530 0.00221930 0.03016900 0.03016900 0.03016900 0.00097064 0.00097064 0.00097064 -0.00097017 0.00180300 -0.00771790 -0.00286710 -0.00055444 -0.00490110 0.00194180 -0.00344150 -0.00263220 -0.00110870 -0.00110870 -0.00110870 -0.00055444 -0.00055444 0.01279500 0.00235810 0.00235810 0.00235810 0.00235810 0.00032584 0.00291330 -0.00346270 -0.00346270 -0.00346270 -0.00346270 0.00000000 0.00000000 0.00000000 0.00013863 -0.00235530 0.00221930 -0.29579000 0.03016900 0.03016900 0.00319100 0.00097064 0.00097064 -0.00097017 0.00485790 -0.01436600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.44375541 13.32653924 7.17051498 10.78830381 6.03942357 10.97511347 5.75226155 1.52987091 8.33579184 8.08104291 -0.64002911 8.92995103 4.38231449 9.64476787 9.65341531 1.68185402 11.22992301 9.45797569 12.84104933 10.39474263 9.63632989 8.02350155 11.23530906 3.91453582 10.04293826 11.12294852 6.88742048 NA 10.41827366 2.88350352 12.95041377 12.33847539 9.02971459 10.15679451 8.43542274 9.13390716 3.68187650 0.35997089 -0.05514155 3.16729369 9.02261194 9.74418784 9.57790140 5.58876260 8.31184048 6.41522628 10.00470124 6.25476220 9.68412425 -0.64002911 11.56130184 5.47888446 4.98930253 9.11941584 5.39798431 8.37256822 9.72899561 9.43073542 9.55593097 0.68185402 13.62203852 3.06037602 10.20739252 -1.64025395 8.43006444 6.34293692 7.43675901 9.17372485 11.5690726 4.6637260 8.3372236 14.6289973 10.1757272 10.0707501 12.3888857 12.4981355 8.9106712 10.8462759 13.3716514 11.6704145 9.5791122 8.2225810 -0.6400291 6.7042398 11.1231560 11.671692 6.348629 8.611414 8.838713 8.139663 10.260010 8.804959 7.612609 10.583040 7.376752 3.447407 6.659151 6.762060 12.544199 11.071826 8.313674 8.211693 13.622075 8.060384 11.436798 9.953802 10.321755 9.621451 11.629216 10.144987 10.484065 9.417259 NA 9.965479 9.799255 11.417428 8.435423 11.547630 10.355711 7.897162 14.046690 9.868234 10.275823 13.084884 10.978788 9.883506 4.087862 TCGA-E2-A56Z 69 0 NA 252 breast stage iib t2 n1a m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 2.080784e-07 9.9915705 9.4196468 11.0534766 5.9168301 9.4148901 8.3644683 9.4300565 10.5909430 9.7009274 13.8044369 12.7409099 10.6439375 -0.1492806 12.6070885 3.2430597 9.6288177 6.4281692 8.2998894 8.1151831 12.9663533 3.0206622 14.2443657 1.1726795 9.8089309 10.2680658 7.6386430 -0.1492806 8.6238797 11.1766082 NA 7.1950365 5.9592648 NA 3.1726635 8.9979455 10.1777318 9.4024489 9.3070951 9.5795115 11.0390204 5.0405637 10.7531158 13.7012693 8.0882376 11.2317428 9.5416116 10.4990982 3.4945948 6.5922073 7.3624936 9.3791947 -0.1492806 10.0137612 6.9275564 4.1726715 3.4945948 9.6337389 12.3572962 10.9631801 10.3475945 12.2357941 8.6072970 10.8150815 11.0241055 10.5187392 10.1579415 4.0206622 11.5932606 11.2762188 2.5511715 10.0771529 8.6820479 2.3101656 1.8507594 10.4723346 9.2998894 10.6942692 9.5786610 4.6056306 8.4963992 10.7895851 10.0004878 9.5896774 9.6852117 -0.041612 0.673570 0.472920 -0.089346 -0.089346 0.429850 -0.038215 0.449970 -0.085236 3.656900 0.299890 0.289040 -0.022515 -0.533760 -0.020869 3.400000 -0.547670 0.547650 0.485100 0.777850 0.598300 0.221860 -0.547070 0.505970 0.505970 0.006341 0.006341 0.006341 0.517460 -0.041612 -0.542630 0.000000 -0.089346 0.429850 -0.068170 -0.038215 0.511530 0.449970 -0.093482 -0.085236 0.359150 0.453370 -0.208250 -1.107800 -1.075400 -0.305370 0.479530 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11.0744407 3.0206622 11.5524803 11.6637201 7.8978648 10.5498793 10.5222817 10.0461129 4.3743023 2.4357086 NA 6.4945964 9.5416116 10.7621326 10.7643781 2.7576207 8.2374222 7.9222032 10.1760461 3.9800253 10.0262902 NA 9.1442124 NA 5.7696051 10.1532139 6.4212031 1.8507594 10.1297707 6.9222026 9.1057692 -1.1491206 13.7873326 -1.1491206 11.5026893 NA 6.7991080 5.8841632 9.3850436 9.4873654 15.991294 6.664521 9.362493 12.607088 10.445532 10.676495 12.966353 11.558962 8.219247 10.003659 12.348967 9.976800 7.362494 8.285369 2.658097 7.297824 11.243595 10.6361931 7.2430578 9.3555597 8.9864499 8.6271738 10.6977236 5.1545225 9.3575441 12.7409099 7.7636300 NA 7.2214276 7.1761811 9.1069494 9.3985992 7.8507407 9.6288177 7.2170630 3.8049415 12.5077162 9.4024489 10.6609105 9.9851670 10.6419035 9.0711191 10.1482301 5.6451569 NA 7.8149951 4.4654521 10.0137612 5.8507394 11.0831616 9.6337389 6.7576314 13.3182188 10.6093803 9.3575441 11.8328430 10.2811932 9.1407595 -0.1492806 TCGA-E2-A570 47 0 NA 931 breast stage ib t1c n1mi m0 female 2011 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 2 3 NA NA 1 1 3 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.080784e-07 10.017342 9.122873 11.268284 6.734359 8.567375 9.333748 10.187184 9.666640 10.931414 12.040065 10.757283 10.082864 7.075014 12.955326 3.490057 9.935361 7.103358 8.532362 8.492196 12.665690 2.557165 14.116151 4.345659 9.963366 10.511890 6.336139 NA 11.049819 9.944007 NA 8.678934 7.780728 NA 2.905081 9.617370 9.666640 10.210173 10.626676 9.541713 10.966942 11.120448 11.780289 14.754968 7.706284 9.988758 9.797306 10.441474 5.419660 NA 7.690191 11.437583 2.097746 10.918311 6.364520 5.697646 3.621290 9.767504 12.170369 10.738882 13.242471 12.267502 8.930624 11.029210 10.392544 10.921101 9.731637 4.383137 11.740462 11.788604 NA 10.795570 8.656154 5.634564 3.185201 10.407210 9.449777 9.886452 9.138023 2.682686 10.059183 12.961920 12.333449 10.372112 9.956492 0.00169510 1.19170000 1.19720000 -0.00604510 -0.00123400 -0.00154590 0.00225020 -0.00630890 0.00197260 0.00000000 0.00000000 -0.00340660 0.00086278 0.00086278 -0.00115270 -0.00115270 -0.00115270 0.00211140 0.00211140 -0.00052363 -0.00107790 -0.00370870 -0.00398550 -0.00398550 -0.00398550 -0.01461000 -0.01461000 -0.01461000 0.60778000 0.00169510 0.00169510 0.00322190 -0.00066222 -0.00154590 0.00794850 -0.00426210 -0.00426210 -0.00630890 0.00197260 0.00697440 1.09560000 0.95607000 0.00000000 0.00016946 0.00016946 0.00016946 -0.00440050 0.00086278 0.00086278 -0.00010781 -0.00115270 -0.00115270 0.01143100 0.00211140 0.00211140 -0.00398550 -0.00052363 -0.00107790 0.00055298 -0.61957000 -0.00398550 -0.00398550 0.00480850 -0.01461000 -0.01461000 0.60778000 0.00363850 -0.01034000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.096 1.096 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.096 1.096 0.000 0.000 0.000 0.000 0.000 0.000 8.84927748 13.51393719 9.90508836 10.10054842 2.41967372 10.90589321 -0.90238920 -0.90238920 9.49967949 8.98037639 0.68266318 7.10896034 2.79817497 10.40891413 9.50074550 4.18519260 7.27764262 9.62911488 8.27515282 10.93811800 9.06553596 6.20625836 10.62667586 1.09774562 8.41288312 9.76838963 5.24747945 0.09774562 10.44036372 2.90508128 12.30367936 11.47358740 7.97425052 10.07715860 8.01957461 9.58154916 3.68269689 2.55716498 1.41964675 10.17588421 9.09350049 10.21082437 9.16247618 3.34566604 10.03537208 8.21667457 10.41796989 5.24747945 9.36217595 NA 10.11454168 3.00462723 3.68269689 11.07080650 6.54051090 2.09774562 8.29985731 7.66758917 6.73435872 -0.90238920 13.60155917 0.68266318 10.24684544 1.68270812 8.78423404 5.41966023 9.04171335 8.84760299 12.644903 6.016597 9.276398 12.955326 9.986477 11.443970 12.665690 11.843618 8.406072 9.503938 13.455492 9.394650 7.690191 9.772808 NA 7.277643 10.835826 11.0475601 5.8256534 9.2487499 8.8222474 8.3169019 9.9704545 6.1421275 7.0284708 10.7572834 8.2974056 3.3456660 7.9834297 5.9503564 10.8597001 10.7032129 8.2114756 9.8076788 7.8256540 4.0519289 12.4705305 10.2101729 10.4117501 10.0649596 10.9545480 9.4060725 9.7929617 7.2726587 -0.9023892 9.5190514 4.6523201 10.9183113 8.4151460 10.4292103 9.7675043 6.6134329 13.8580895 10.2308756 10.4003724 12.4587177 10.8909303 9.3574768 1.0977456 TCGA-E2-A572 72 0 NA 1208 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA NA 3 NA NA 1 1 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.3009551401 8.1158031742 10.5337619893 3.5230224127 9.1196969922 7.4792394551 9.4382508445 8.4973109744 12.3657812935 13.0552499101 11.3470804503 9.9966385807 1.8068189644 13.2146887185 -0.0005771935 11.8210337932 7.3614025520 6.7610099541 10.4083195495 12.0885784763 NA 14.8178415477 6.2473864013 11.0415630600 9.0120836713 9.7102655799 -1.0005771935 7.8636454971 11.8230253557 -1.0005771935 7.1843348507 3.0869196067 NA 2.3213797666 8.0869217291 8.3874762809 10.0431699051 9.0190496858 6.9881438588 9.2986670208 0.5843853073 9.9294571169 13.6898936517 0.5843853073 10.4246750274 9.9717210060 9.1979042057 3.9536563622 8.6665705631 6.5768879048 9.8589939461 -1.0005771935 11.2258712614 1.5844334155 2.9994588879 2.8068189644 8.2662454286 11.4125580977 10.2923558015 11.2633150982 11.2656599908 10.0574508137 9.8003589496 10.4434386118 9.0424864793 9.0064862600 0.9994949683 10.5669399387 10.2021950995 NA 10.0601550899 7.2040301545 2.4588806663 NA 9.8315579121 8.0356327066 10.6701153584 8.1643659403 2.9063518889 9.3381955212 11.6383474851 10.9142179044 9.0802765821 9.4792394551 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.7476519053 11.3137590811 1.9994588879 7.9909809466 1.9994588879 11.2662456043 1.8068189644 NA 9.3370810687 8.1364503204 NA 5.1492065156 3.3213941989 10.0452187882 9.4183658036 2.3213797666 5.5072523386 7.1235803290 10.8052029616 13.9448572016 9.5424523052 5.4088510975 10.6315455053 NA 10.2155986415 10.1668772220 3.7543423811 NA 10.6833309978 4.3570100125 12.5422491490 12.3390307682 6.6576700134 8.6683439608 10.4035362638 10.6581168474 2.1693798803 -0.0005771935 NA 7.7137047492 10.4408471637 12.7289736160 9.1929844025 2.4588806663 8.5922525787 10.8488642040 10.3264502735 4.4588937866 9.9235292406 -1.0005771935 10.9580117846 NA 7.8386631487 9.8405752713 8.7657893171 2.8068189644 10.2366689981 7.3168716148 9.3614027713 -1.0005771935 14.3667714495 -1.0005771935 12.0974911684 NA 4.9301979999 3.9536563622 7.7742461122 9.5975116208 14.739309 5.374497 8.576888 13.214689 10.412029 10.851598 12.088578 10.214992 7.888203 9.263902 11.893898 9.803590 6.576888 8.499305 2.699907 6.523021 8.818041 9.5834820397 8.1793682267 7.7476519053 8.1618504056 6.8449492526 9.1312259972 5.4751919135 8.5674150108 11.3470804503 8.0411181080 -0.0005771935 8.1338855933 6.8732103093 5.7543477264 8.9522004628 7.6935036843 11.8250141727 3.8068189644 2.1693798803 9.4963229277 10.0431699051 11.3134757902 9.4109700349 8.9405068246 8.4173116138 9.9478262656 5.4913111824 NA 8.9109859386 3.5230224127 11.2258712614 8.6736514652 10.5745256008 8.2662454286 6.8698232991 14.6587024545 11.5564440251 8.7476519053 11.3687837881 9.6288156902 8.0438530073 -1.0005771935 TCGA-E2-A573 48 0 NA 1062 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 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3.42529816 11.74132785 9.51090912 -1.09819665 10.67280709 9.11847627 3.99046481 5.03101136 11.76533591 10.36423262 9.67980748 9.42038345 1.70907002 7.35705753 12.64908418 13.25273859 9.58296878 10.47632386 0.0874280 0.6242900 0.6015600 0.0507140 0.4477000 -0.3950500 -0.1556300 0.5212300 0.3572900 0.1318800 0.1318800 0.1318800 1.0744000 0.0909030 -0.1419000 -0.1348100 -0.1348100 0.1777300 -0.1456000 0.2756300 -0.1399700 -0.3628000 -0.1397100 -0.1397100 -0.1397100 -0.1390700 -0.1390700 -0.1390700 0.4606300 -0.0696420 0.0874280 -0.1057300 0.0507140 -0.4820500 -0.3950500 -0.4904400 -0.4810600 0.5212300 0.3572900 0.3572900 0.1209700 0.1574500 0.1474500 -0.1251800 -0.1251800 -0.1251800 -0.1251800 -0.5800600 -0.1463500 -0.0075739 -0.1348100 -0.1348100 0.4987800 0.1175900 -0.1386800 -0.1386800 0.0094856 -0.1399700 -0.3628000 -0.1395800 -0.1397100 -0.1397100 -0.1379100 -0.1390700 -0.1390700 -0.1856800 0.4492900 -0.1309200 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.111 0.000 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.111 0.000 8.9651254 13.0498891 1.9017261 9.6142573 3.1496658 12.5775772 4.1871343 5.7219085 9.2180120 8.9268700 6.1305500 7.0716554 5.0310114 10.7123020 9.4321368 5.9570138 7.4213664 10.0495713 7.8324679 9.5943459 8.4686216 6.6296510 11.0486172 2.6021718 8.7282787 9.8882836 6.3611613 NA 10.7480043 4.0716511 12.4081619 12.9772931 7.4252923 10.4462119 12.0342301 9.6723942 3.2236542 3.4252982 NA 5.2592838 8.6021699 9.8631801 9.1087448 6.6765171 9.6961218 8.1591180 10.1514365 5.6159753 9.4154581 5.9570138 11.6258178 3.2236542 4.7346229 10.3853850 7.5102807 8.3321829 8.5164403 8.4193998 10.3940843 4.3611648 13.3670417 0.4866629 10.9430473 NA 8.9003207 4.1871343 7.8847237 7.9101588 9.928524 8.614257 7.855927 11.506747 10.662866 11.378730 5.501643 8.779781 8.664943 10.459673 13.634905 10.129346 8.767464 7.130549 1.901726 8.041282 10.925485 10.884724 5.669914 9.552782 8.577688 9.199793 9.689568 7.989193 7.285435 11.279754 11.302610 5.989194 10.244361 9.098984 11.135949 10.515520 6.873274 10.661619 5.393584 8.845710 10.558825 9.603903 10.352941 10.031657 11.532453 11.530859 10.087845 7.456319 NA 9.723409 9.106301 10.126335 7.005018 10.323269 8.497920 7.501643 13.790474 10.435547 10.666187 12.614365 11.678163 8.805612 3.149666 TCGA-E2-A574 44 0 NA 1179 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.788144e-06 8.381925e-07 7.5018929 8.3538548 10.0291401 5.7664149 9.4203502 8.5523652 8.8995180 10.2834963 10.4072940 12.6218299 10.2651927 9.6218299 -0.8334131 11.9708354 2.9738500 10.5647119 8.2433182 8.5609652 8.1749312 3.6900595 NA 4.5927680 7.2325917 10.1791342 9.7994979 2.4884379 3.2539590 6.9213899 11.3175192 2.4884379 7.8807480 5.7958604 NA 1.9738684 7.2054218 10.4725643 9.0260376 9.1322869 8.9130168 8.7552174 1.1665226 7.4096769 13.1909498 5.0891761 8.8790297 9.8184513 9.8459828 2.6259250 NA 8.8389281 7.9445797 NA 9.4725643 1.1665226 2.4884379 5.7514664 9.3213207 12.1997536 9.8530032 12.2914317 11.9386110 8.1523447 10.4547920 6.0368681 9.6583557 9.1046121 2.6259250 11.6213160 10.0414841 2.1664905 9.0613204 9.4001222 2.3364262 -0.8334131 11.7901556 9.9986016 10.2552909 8.9834862 0.1664584 6.5415427 12.0318493 12.7647878 8.9962255 8.6683397 -0.024114 0.705130 0.614260 -0.407820 1.810600 -0.433660 1.660900 0.337420 0.353810 -1.150400 1.678700 0.941610 0.697340 -0.454360 0.155320 0.248890 0.248890 0.757770 1.507900 0.694650 -0.160260 -0.273140 0.333670 0.333670 0.333670 1.062100 1.061600 -0.515270 0.701010 -0.027398 -0.024114 0.165500 -0.407820 0.386840 -0.435280 -0.465250 -0.458540 0.357730 0.470310 0.786590 0.788910 -0.058193 -0.523480 0.000000 0.000000 0.000000 -0.447820 -0.454360 -0.463110 0.155320 0.155320 0.283110 0.274110 0.781960 -0.848670 -0.169800 0.694650 -0.852500 -0.269500 -0.076812 0.333670 0.333670 -0.910780 0.285330 1.042000 0.738150 -0.317160 -0.478240 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.701 0.701 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.787 0.787 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 0.000 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.701 0.701 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.787 0.787 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 0.000 4.7210937 12.4732764 6.7589600 8.7037212 2.2607483 10.6279821 1.1665226 4.6583543 9.7830514 5.1888717 0.1664584 9.2339369 1.7514637 10.8367163 9.9037501 1.9738684 5.1437811 10.6171985 5.0733918 10.7825920 9.7551329 5.3364262 11.8734303 -0.8334131 9.1423506 9.0151256 1.1665226 NA 9.5502069 6.7133975 14.6878884 13.3824906 7.3856709 10.0793920 7.3856709 11.9056504 2.1664905 2.1664905 NA 9.0567669 10.0756457 11.4813691 9.2352809 7.8139614 7.1857040 8.5801304 11.1843550 2.4884379 10.3618748 0.1664584 11.1170586 NA 2.8669475 9.7937995 9.1657838 NA 7.9045949 3.6259367 3.2539590 8.0491455 14.6555039 NA 11.0422520 0.1664584 9.6920235 2.7514637 8.1805233 7.5673819 11.827693 8.889310 7.941289 11.970835 9.944580 11.087228 3.690059 9.675288 9.202855 9.485045 12.149318 12.668464 8.838928 9.451905 2.866948 8.177730 9.167911 9.3187875 2.1664905 8.5085772 7.8669426 8.3314096 8.3855018 3.2539590 1.1665226 10.2651927 12.1721272 NA 8.0552461 7.7435540 10.1480699 8.9786799 8.3214727 11.3510681 1.9738684 1.7514637 10.3341466 9.0260376 10.4191681 10.4957384 11.8289485 11.0395622 9.4120553 6.8876020 NA 9.1040237 0.7514637 9.4725643 8.1999255 9.8781696 9.3213207 7.8318386 15.7363434 11.4948971 11.5085773 11.2533023 11.5069091 8.8442224 0.7514637 TCGA-E2-A576 69 0 NA 1043 breast stage ia t1c n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 5 2 NA NA 1 1 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1747015 8.5747888 10.4765838 6.2319008 9.1539596 7.5920257 9.7638529 8.4668057 9.5851554 9.0825834 11.3634442 9.5547084 0.8743642 13.6465604 2.3337672 11.1872319 7.0138999 8.2794903 9.4308550 12.0694134 3.7323343 13.6695769 4.1597503 9.7697499 10.4996012 3.7323343 2.4593005 11.0555011 10.7123709 -0.1256358 10.2041452 4.2319008 NA 3.3979125 8.3601781 9.0641734 8.0316957 9.6425332 8.8701159 10.3726995 4.5182078 11.9659496 13.1988811 7.3318118 9.7630922 9.8841775 9.8146626 3.7323343 3.1222751 6.3006143 9.2230771 -0.1256358 8.8672871 5.1411344 4.3006143 3.8743445 7.8855762 12.2111344 10.7393088 10.4465754 11.5984363 9.1860972 10.2373885 10.5708992 9.7072388 9.1735570 0.8743642 10.5569046 12.0291670 NA 9.6695769 8.8729392 4.3006143 1.4593267 10.1701178 8.9471515 10.1264230 9.7961899 3.0442717 6.7991611 11.9050160 10.4513056 9.6217026 9.2308008 -0.7270700 0.0600130 0.0415340 -0.5274100 -0.5329100 -0.0471870 0.0183180 0.0413120 0.0000000 0.7447100 1.5241000 1.5947000 -0.0076742 -0.7522300 0.0378580 0.1158700 -0.7447700 0.0968940 0.0231590 -0.7579600 0.0255260 -0.7265400 0.0957310 0.0957310 0.0957310 0.1088500 0.1088500 0.1088500 0.2715600 -0.7060800 -0.7270700 0.0118930 -0.4818700 0.0487640 -0.0489460 0.0183180 0.0032157 0.0413120 0.0000000 0.0000000 0.0225200 -0.0409510 -0.7482800 -0.0094686 -0.0094686 0.0429500 0.0367130 -0.7522300 -0.0071217 0.0378580 -0.6639700 -0.7447700 -0.7764000 0.0231590 0.0231590 0.0231590 -0.7349900 0.0610560 -0.7143900 -0.7167900 -0.7120700 0.0957310 0.0425250 0.1098700 0.1088500 0.2874700 0.0153820 -0.7020300 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 -0.148 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 -0.148 7.9564981 12.8833902 7.6977161 9.4742618 3.0442717 11.1996544 3.1222751 -1.1256358 10.1085676 8.2943092 NA 6.8911567 4.0036292 10.4260571 9.5485412 6.1781290 6.6817037 8.7661327 8.9105225 12.5932028 9.3893390 7.0935179 9.6225417 1.1962923 9.1481445 9.5352361 3.7323343 -0.1256358 10.6145513 3.3979125 12.8776033 11.4826037 7.2837394 9.5590975 8.5782523 11.0386273 2.1962923 0.8743642 2.0442892 3.2666666 10.2477578 11.7737058 9.5209076 3.6292400 8.6463665 9.3368511 10.0042758 5.5747888 10.0480261 -0.1256358 11.1513456 0.4593267 4.0838005 10.0874228 6.5323466 4.7323289 9.2384836 7.8799734 9.3265902 0.4593267 14.4654914 -0.1256358 10.9427913 -1.1256358 6.4212435 4.3337815 7.7166994 9.3949677 13.923073 6.421244 8.175845 13.646560 9.334805 10.516852 12.069413 10.359675 8.452137 10.037999 12.297859 11.430376 6.300614 9.950496 3.574792 7.707239 9.602269 10.4555495 6.3006143 8.3151971 9.5808449 8.7812394 10.3922742 5.7569912 5.9723802 11.3634442 7.1872323 2.0442892 5.6158165 7.2618495 6.8911567 10.3626911 7.4365916 11.4303759 6.2406711 5.5037049 14.1295339 8.0316957 11.4301363 9.5669645 10.5911683 9.1411354 10.4342039 4.9828750 -0.1256358 9.2681040 6.2052654 8.8672871 4.9828750 10.8021269 7.8855762 7.3581650 14.2417636 10.1798407 8.8372451 11.5892383 11.6744399 9.7909748 -0.1256358 TCGA-E2-A9RU 90 0 NA 538 breast stage iiic t2 n3a mx female 2013 NA yes infiltrating ductal carcinoma 12 black or african american not hispanic or latino NA NA 1 2 NA NA 2 2 1 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6595707 8.0601085 10.6371559 5.2121102 9.5677432 8.0006074 9.5715818 9.6402053 11.4734373 12.3568626 11.4819609 9.9592061 NA 12.4922919 3.0157116 11.3034268 6.4194361 7.1722185 7.4531200 12.4391806 NA 13.5063147 5.1856406 9.9660274 10.0943101 7.1586723 1.0157116 8.9582291 12.5132337 -0.5691795 9.4008579 5.8401434 NA 2.2381143 9.0491374 9.4279315 7.7161541 9.5766841 8.0343781 9.6810504 7.2949377 10.2723164 14.4975559 5.4368248 8.9562728 8.8337639 9.6547536 3.3376397 2.4307402 7.3614894 10.0782105 -0.5691795 10.7481646 4.3376397 3.8901840 4.7161569 9.1654615 11.6380714 10.6998787 11.3961755 11.5102367 7.9582291 10.6822344 9.5035545 10.0969760 9.8570166 1.4307670 11.8483408 11.3130129 NA 10.2871774 8.5754103 2.0157116 2.0157116 10.1389736 8.7594268 10.2030665 8.5182149 2.4307402 10.5068995 12.2723163 11.7504241 9.3133951 8.9543138 0.0000000 0.3390100 0.7575700 -0.3752700 1.0034000 -0.3572600 1.0983000 0.5217100 3.6569000 3.6569000 2.3878000 1.8040000 -0.1098500 -0.0463120 0.7051300 2.2619000 1.2830000 -0.1139100 0.5709500 -0.2605900 2.2495000 -0.0951200 0.0024969 -0.1509300 -0.2365500 0.8647300 0.8647300 -0.0559030 0.5804100 0.0144700 -0.0016629 -0.0505060 -0.3848100 -0.0874470 -0.0992090 0.2587100 0.9567200 -0.0646430 -0.6178600 -0.0042929 0.4799300 0.4386800 -1.0380000 0.3137000 0.2893500 -0.0738770 -0.0637030 -0.0463120 -0.0463120 -0.1375500 -0.2034900 -0.9702500 -1.0887000 -0.1139100 -0.3901800 -0.3901800 -0.0066321 -0.3218200 -0.0672770 -0.3685800 -0.6495900 -0.1509300 -0.2873900 -0.9690300 -0.0875790 0.5804100 0.5899100 -0.2828700 0.000 0.000 -0.643 -0.643 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.631 0.000 -0.287 -0.287 0.865 0.000 0.000 0.732 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.157 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 0.296 0.000 0.000 -0.643 -0.643 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.631 0.000 -0.287 -0.287 0.865 0.000 0.000 0.732 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.157 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 0.296 8.0417769 13.3906634 5.2636429 8.7345328 1.0157116 10.3900295 2.6006741 NA 9.9920399 8.9365634 NA 7.5075679 6.6595707 11.0578298 10.0646553 5.3614877 5.1031787 8.7772658 9.2887330 12.0306648 9.2200085 5.8230691 10.6816425 1.0157116 9.3979783 9.6365452 2.2381143 NA 9.8664223 4.2381066 13.5711025 12.5980133 7.8901834 9.1637674 9.9355710 10.7487298 2.6006741 1.4307670 NA 5.1031787 9.3922017 10.4812809 11.1624952 1.0157116 8.1814922 9.0380822 10.0889635 4.9226070 10.0390068 NA 8.5048933 0.4307135 3.1311944 9.9272663 7.9527057 2.2381143 9.0925301 6.9929938 5.8570156 4.1856366 14.7286355 -0.5691795 11.3473779 NA 9.2202857 3.4307536 7.2762417 8.2153869 13.052552 8.019467 7.877835 12.492292 9.153559 11.501544 12.439181 10.422274 9.876801 9.198936 12.257300 11.586203 7.361489 10.323295 1.430767 7.008181 9.831631 10.1864741 5.6205776 8.6181039 7.8736957 8.4290322 8.5624031 5.6975375 5.4531192 11.4819609 11.0800082 2.2381143 9.6511303 9.1607296 10.1931340 9.7794802 8.0782106 11.5680634 6.0746082 3.0157116 10.4724522 7.7161541 10.0297349 10.3263272 10.1914720 8.7299599 9.9650548 5.2887314 4.3849478 8.6247699 3.3376397 10.7481646 7.2251679 10.1058269 9.1654615 8.4447722 15.1163768 11.2949381 9.7816912 12.3596404 10.4648631 8.9987080 -0.5691795 TCGA-E9-A1N3 70 0 NA 1059 breast stage iiia t1c n2 m0 female 2010 NA no mixed histology (please specify) 7 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.9713452 10.3588571 11.9232183 10.2339742 8.3517114 8.8154403 11.3884590 9.6182713 9.7095670 13.2299131 11.1222938 10.8233233 4.9157599 12.6822721 3.6337218 8.9208060 7.0901707 8.3616438 8.0736489 13.8302696 4.3837458 14.5899675 1.4962067 9.8105040 11.5516378 8.5719665 0.4962067 9.5815595 12.6714575 2.6978628 7.8217504 5.9022111 -0.8257214 3.6005552 10.0504248 10.2166350 10.7396319 9.7526643 10.1551453 12.4431261 3.4222195 11.6802273 14.2076932 9.5078999 10.6236984 12.0214469 11.4834838 4.1966621 6.0991037 9.1931873 9.9212258 -1.8257214 10.9404065 3.3837458 4.5318430 4.3641171 10.3186313 11.7955423 10.5773037 11.3022860 12.9983057 7.5815591 10.5433437 10.7213187 10.9466063 11.3636530 5.4410784 11.4839102 11.2950156 -0.2407589 9.9896751 8.9751917 3.6045814 4.6337218 10.2925839 10.3379414 11.1118494 9.5340412 2.0811692 8.6701467 11.2532764 10.2864054 10.1679378 8.6681471 0.00597000 0.00597000 0.00597000 -0.00719580 -0.00719580 -0.00277070 0.00000000 0.00305220 -0.00470790 -0.00163570 -0.00163570 0.00027728 -0.00318590 -0.00263220 -0.00443120 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00638710 0.01195800 0.01195800 0.01195800 0.01181800 0.01181800 0.01181800 0.00972760 0.01056400 0.00597000 -0.00903720 -0.00719580 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00899060 -0.00470790 -0.00470790 0.54259000 0.54259000 -0.00163570 -0.00152430 -0.46344000 -0.00110870 -0.00110870 -0.00263220 -0.00263220 -0.00443120 -0.00443120 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00638710 0.00652620 0.01195800 0.01195800 0.00235810 0.01181800 0.01181800 0.00972760 0.00388540 -0.47064000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 0.000 7.3366833 10.3849631 6.1515707 8.4962199 4.7742020 10.6850559 0.7592411 -1.8257214 8.5384264 6.8360693 -1.8257214 7.0362473 2.6337334 10.4995972 8.9912752 0.7592411 7.1371879 9.4174656 12.9884736 10.9231135 10.0699502 8.4746441 10.0935274 2.4962322 10.7291203 8.9408207 3.0322772 0.1742786 10.7267206 3.8747281 12.7502445 12.1323913 7.0569346 9.9980570 8.3479690 9.2531098 5.9022111 -0.2407589 0.7592411 7.0751582 9.6875258 9.9900753 10.0815580 4.3837458 9.1907867 7.0538749 10.5794331 4.7742020 9.5601542 NA 13.6727358 1.3442036 10.4689125 9.8463015 7.4957463 3.3837458 7.6919612 6.9556511 7.1342939 -0.2407589 13.6553027 -1.8257214 11.4371206 -0.8257214 8.6490118 4.8885387 7.7926771 9.9666753 14.107734 5.393461 9.209778 12.682272 10.692945 10.921226 13.830270 13.747673 8.998335 11.002031 12.300674 11.413741 9.193187 7.540614 -1.825721 7.478072 10.429615 10.9880729 7.7076214 8.6337233 8.9499020 9.0252597 10.1158603 5.2077133 8.6661448 11.1222938 6.6255028 -0.8257214 2.7592624 7.0766970 9.2410536 9.8369600 9.5471567 9.3303749 11.6373051 4.4222195 12.2583551 10.7396319 10.0796786 10.1558590 12.3566084 8.5029666 10.7634747 9.2867312 -1.8257214 9.4713913 4.4780723 10.9404065 5.0446564 11.0851218 10.3186313 7.4293205 13.9995981 10.6444422 10.2785628 12.6668334 9.1284880 10.3641163 0.9816335 TCGA-E9-A1N4 41 0 NA 1000 breast stage iiia t2 n2 m0 female 2010 NA yes mixed histology (please specify) 4 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 10.7786260 10.3177500 11.4257205 9.7867083 8.3085170 8.8003454 9.8354433 10.4534014 9.9485509 12.4179362 9.5254460 10.3407140 2.0684301 11.8883246 3.6248262 10.6626421 6.6103206 8.4768195 10.5357931 11.9889553 3.2288956 12.4426997 2.6814043 9.2651523 9.3107607 7.0604495 0.5658896 9.6338093 11.1516719 2.6248262 6.8727487 7.6463002 -0.4340130 5.8201687 10.2073767 10.6094100 10.0992567 12.0236498 10.1262597 11.8582486 0.3028747 9.8272384 14.9016662 7.4705718 9.2784425 12.1264190 11.4161138 3.8138530 NA 9.5799474 11.6880000 NA 11.5326727 6.1256222 11.2516978 5.8201687 10.7867083 11.7848937 10.3110410 12.6679026 12.5963067 6.0999053 9.6670272 10.4580295 10.9091127 11.3576325 5.2193699 11.7348080 9.7291573 NA 10.1357825 9.4332057 2.9064866 5.7088852 10.8459244 10.7086722 10.2312628 10.1147488 5.3296941 4.3903581 12.0636956 11.9135483 9.2698306 9.0637788 0.0133530 -0.0037264 0.0054273 0.0151680 0.0151680 0.0244080 0.0124370 0.0165650 -0.6400100 0.0098073 0.0098073 0.0090312 0.0012744 0.0061090 0.0027745 -0.0033988 -0.0033988 -0.0066432 -0.0066432 0.0141900 0.0078965 0.0125950 -0.0482070 -0.0482070 -0.0482070 -0.0916840 -0.0916840 -0.0916840 -0.0216400 -0.0506410 -0.6237000 -0.6032200 0.0151680 -0.6542600 0.0244080 0.0174040 0.0174040 0.0165650 -0.6400100 -0.6428200 0.0109820 0.0078564 0.0146090 0.0059700 0.0059700 -0.6445200 -0.0247980 0.0061090 -0.0016629 0.0015224 -0.0033988 -0.0033988 0.0157270 -0.0066432 -0.0066432 -0.0066432 0.0141900 -0.0093052 -0.0126530 -0.6798000 -0.0482070 -0.0482070 -0.6504500 -0.0916840 -0.0916840 -0.0177940 0.0000000 -0.0600760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.637 -0.637 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.637 -0.637 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 8.62842294 14.16878043 5.20978476 8.80353542 4.68140429 9.18247580 3.86361143 NA 8.16459976 7.15339192 NA 8.32786607 0.30287467 10.60278737 9.60758609 -0.01902419 9.52785894 9.35871713 10.77375474 10.36250737 9.06968633 7.88635139 10.67575763 3.33850999 9.62932201 9.78065082 8.84747051 NA 10.75863073 3.06843005 13.23000380 12.34071400 8.15214133 9.93406957 8.62301598 9.20737654 0.56588958 2.88785666 -0.43401296 2.22888024 8.69692650 9.73167135 10.30795566 4.15089269 5.67466120 6.55082065 10.33411124 6.27098298 9.74749331 NA 11.14697056 6.44857063 4.00333238 9.57250091 6.94761356 4.87578006 9.64984948 8.87046829 6.44039580 -2.01917038 13.79243949 0.78835162 10.20797860 NA 8.50452625 5.82645442 8.05108547 8.86284313 12.007916 6.617589 9.783077 11.888325 10.629547 10.842051 11.988955 12.045960 9.335214 10.985185 13.178258 10.884470 9.579947 8.342908 1.788310 7.331904 10.342360 10.7709056 4.8011431 9.3352139 8.4847903 9.3379666 9.9148579 7.2709830 8.0470535 9.5254460 4.9582441 1.3028747 3.0684301 7.3019680 10.5949840 10.3627777 8.6586842 8.0143877 14.0220032 5.6883231 10.7627442 10.0992567 10.4584698 9.4956786 10.4808103 9.9267741 10.5649874 9.6917709 NA 9.3084159 6.0143865 11.5326727 7.4072295 10.9907931 10.7867083 7.3861056 13.8762320 11.1249853 11.1237097 12.9581102 9.7995467 9.5220610 0.5658896 TCGA-E9-A1N5 45 0 NA 1120 breast stage iib t2 n1 m0 female 2010 NA no mixed histology (please specify) 2 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 7.282743e-07 2.080784e-07 10.4683332 10.0395092 11.8230174 10.0964826 8.2368767 9.3566993 10.4307000 9.5089194 10.1139152 13.1423522 11.6323339 10.5084313 2.1494220 11.6403762 1.9794766 10.0576397 7.1443962 8.4971585 7.3588674 12.8720317 1.5644757 13.2661910 5.8374690 9.0248527 10.9434687 6.7410395 0.5644269 10.9685286 9.5167074 3.4389182 8.6215406 7.2832699 NA 5.1494138 9.6963084 10.7082598 9.7876488 10.8064346 9.4036552 11.5870504 0.9795132 10.7022964 15.1779723 8.2359807 10.9216369 11.3315324 10.4607838 4.8621340 3.4389182 9.4109866 11.5343176 -1.0206331 11.2046963 5.7996676 6.7209556 5.0238852 9.8147499 11.7910643 10.0576397 12.0452416 12.8486972 8.3588674 10.9120728 10.5786160 11.4450553 11.3460844 5.2648929 11.9096718 12.0524589 NA 10.5340778 9.1865033 4.4097711 5.8249791 10.2901017 10.2089086 10.3143209 10.1469071 3.5644513 7.2786966 13.0301879 12.2440781 10.2855506 9.7956726 0.00000000 0.00000000 0.00000000 0.00208050 0.00208050 0.00708260 0.00194180 -0.01119800 -0.56165000 0.31274000 0.31274000 0.33001000 0.00013863 -0.00664320 2.03150000 2.23890000 -0.54885000 0.00124810 0.00124810 -0.07361000 0.55655000 -0.04834200 -0.54330000 -0.54330000 -0.01230000 -0.02671400 -0.02671400 -0.02671400 0.30330000 0.00000000 0.00000000 -0.00691950 0.00208050 0.00708260 0.00708260 0.00847430 0.00847430 -0.01119800 -0.56165000 -0.55807000 -0.00034502 -0.01436600 0.31274000 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00664320 -0.00664320 -0.54562000 -0.55617000 -0.54994000 -0.54925000 0.00124810 0.00124810 0.00124810 -0.07361000 0.03002900 -0.04108000 -0.49392000 -0.54330000 -0.54330000 0.03919500 -0.02671400 -0.02671400 -0.53713000 0.03524200 -0.16357000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 0.000 9.4853004 13.8477327 8.7343763 10.5583333 4.3718097 11.4332740 2.5644513 -1.0206331 8.2579384 8.3215638 -1.0206331 7.6896409 2.9794949 10.2625773 9.5273474 4.7343790 10.0018567 8.9752562 10.4353298 10.0696013 9.8473081 8.1889424 11.0381572 3.5644513 10.0327360 10.2486156 3.8374690 -1.0206331 11.6492598 1.3014121 11.8281118 11.9324121 8.1593981 9.4057537 9.0893196 9.1816127 5.4057542 2.1494220 0.9795132 7.6051980 8.7074095 8.5283107 9.6024558 5.3545297 7.8861392 6.8249791 9.4015537 6.5108702 9.5635119 NA 11.1266938 2.7868472 5.5340772 9.8002821 7.6819383 0.5644269 9.6928754 9.3326357 5.6799276 0.9795132 13.0939633 1.5644757 10.3014170 0.5644269 8.0101560 5.3370402 7.5531362 8.8218393 14.266307 6.693735 8.664237 11.640376 10.169313 9.811588 12.872032 11.242171 8.596038 10.957484 12.928768 11.337591 9.410987 8.690295 2.679919 7.149414 10.640376 11.329047 7.007395 8.914654 8.880356 8.334840 10.567815 7.575678 7.971011 11.632334 6.405754 2.679919 5.337040 7.773482 11.633454 10.286690 8.994904 7.965331 12.787548 5.665990 11.272006 9.787649 10.828503 8.378232 10.163124 10.305356 10.639039 8.786844 NA 9.106967 3.503056 11.204696 8.356699 10.896861 9.814750 7.750978 13.405754 10.181000 9.640376 12.002203 10.956053 9.621541 2.886375 TCGA-E9-A1N6 52 1 678 410 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 5 1 NA NA 2 2 4 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7479538 9.9561572 11.6844030 8.4517007 8.8716238 9.3576774 9.9602909 10.6747919 10.6960176 14.4743996 9.1246249 10.7864908 0.9261513 13.8048055 1.7335279 10.5251627 5.5408890 8.1645847 11.7746071 12.3330491 -1.0736969 13.5025460 NA 9.6114629 11.8769179 5.8088226 -1.0736969 8.2115822 11.3139279 -1.0736969 8.2593351 8.1060886 NA 3.8330722 9.7140823 10.4521899 10.0215767 11.2444401 9.5834982 10.8694271 1.7335279 10.3597653 15.6624363 8.1568248 9.5083217 11.3168861 10.9780684 4.9261797 1.7335279 8.6266195 12.6103805 0.5111644 10.1135319 5.0961058 5.4180314 5.1929674 10.1190890 11.9993172 10.6747919 12.2789129 12.4804089 8.1788451 11.1574009 10.1267290 10.8930457 11.0059979 4.4180347 11.4696950 9.6429992 NA 10.7712778 9.7724536 2.2495364 5.6810669 11.4490065 9.8919641 9.5968360 9.8141619 1.9261892 9.3566322 12.3799648 11.6261859 9.8420591 9.1429257 -0.3527700 0.5688100 2.9454000 -0.1747400 0.0000000 -0.1423200 0.1450300 -0.1527200 -0.1527200 1.0519000 0.4756400 1.1562000 0.0956530 0.3931300 0.0820430 0.0820430 0.0820430 1.2272000 0.1758800 -0.3297100 0.4087800 -0.2043600 -0.3871000 2.5577000 -0.4894200 -0.1327700 -0.1327700 -0.1327700 0.1477100 -0.2764300 -0.3527700 -0.1503600 0.0000000 -0.1522100 -0.1423200 0.1450300 0.1450300 -0.1793700 -0.1527200 -0.2803700 0.7015700 -0.1542600 -0.3975300 0.1043900 0.1043900 0.1043900 0.1043900 -0.8994700 0.3832000 0.0820430 0.0820430 0.0820430 0.0820430 -0.1374200 0.1758800 0.1758800 -0.3196100 -0.5016200 -0.2115600 0.0731150 -0.3871000 -0.4667400 0.1222600 -0.1327700 -0.1327700 0.1477100 0.0852210 0.0029133 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 0.406 0.804 0.104 0.104 0.340 0.207 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 0.406 0.804 0.104 0.104 0.340 0.207 8.3773910 14.7729434 5.0961058 10.2526093 NA 11.1389801 1.5111644 -1.0736969 7.9841718 9.3098840 NA 7.9251651 4.0961016 10.9353086 9.1098152 1.2481097 7.0657306 9.5251627 9.6651165 10.8952065 9.4602978 6.9814623 11.3680865 1.9261892 7.6438562 10.5330476 7.9402002 NA 10.4180328 1.5111644 12.2253878 12.2661689 8.6760491 9.3545399 10.1392840 9.4979325 4.8803770 1.9261892 0.5111644 6.4180331 8.7950022 9.2424613 9.1633898 3.0136409 9.6824692 7.5700363 9.7833833 6.7270791 9.1764781 -1.0736969 10.8785570 3.9705776 3.2481097 9.6743222 5.3008705 1.9261892 8.8330703 8.5861755 4.7590706 4.4180347 14.2036488 1.2481097 11.3158111 NA 7.1307507 3.6810669 8.1953063 8.3773910 11.7955808 7.0910862 8.5167669 13.8048055 9.5618888 11.7831888 12.3330491 11.7146942 9.1729202 11.0337238 13.1175475 9.5879579 8.6266195 10.6021368 0.9261513 6.8390690 11.3688641 11.8659426 6.1453473 8.9374071 9.7543163 8.3482444 11.0000770 6.6266202 9.4893759 9.1246249 7.5445650 0.5111644 6.5408890 8.8355180 11.4872290 10.4701782 8.2185012 9.6743725 10.3830475 4.0961016 10.9120893 10.0215767 9.7009668 9.9027440 10.9726217 10.3644518 10.8825559 9.3876592 7.7140820 9.6577365 2.6266260 10.1135319 9.0998569 10.9996519 10.1190890 7.3649716 13.0761650 10.2892194 10.3722292 12.3182288 11.4175318 9.4556104 1.7335279 TCGA-E9-A1N8 48 0 NA 1039 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 10.3470559 9.2463306 12.1788046 9.9893088 8.8799299 9.0104864 10.2684752 10.5568327 11.1055039 12.8953992 12.8072914 10.4976016 0.4947740 11.2940681 3.9542149 11.1350315 8.2673761 8.2518989 10.3287308 8.7236053 NA 5.6102630 10.0891112 9.3220976 10.6244988 4.4016782 -1.0901885 8.3465355 10.5008788 2.4947740 7.9542184 7.0493759 2.3692431 4.3360905 10.3107034 11.9668004 8.7268077 9.3885936 11.5229228 11.9949645 5.0797493 12.5271767 14.4265705 7.9444028 9.4806285 11.0461744 10.8468300 4.4016782 2.3692431 9.7631337 11.2235574 NA 10.9501138 3.2317550 5.4176196 5.6647104 7.8106912 12.1104162 9.8956660 11.5835748 13.2445163 7.4333860 11.4994752 11.5737179 11.4839445 11.8591036 5.4176196 11.8854929 9.3506933 NA 10.1168384 9.1917541 6.6375407 2.9098307 8.8435147 11.4375454 11.6952765 8.8698261 0.9098115 7.0747313 12.3260938 10.8759689 10.2546747 11.0012594 0.1434700 0.1739200 0.1521600 0.2165300 0.2188300 -0.7840400 0.5215300 1.1407000 1.1449000 -0.7945300 -0.7945300 0.2435800 0.0000000 0.0000000 0.2313200 0.2313200 3.6569000 1.5546000 -0.0182160 1.3610000 -0.7980300 0.1462100 -0.8141300 -0.8106300 0.3723300 1.1619000 0.1029300 0.1029300 0.1541200 -0.0273980 0.1434700 0.0775740 -0.8053700 -0.8108600 -0.7903800 -0.7980300 -0.7980300 1.1407000 0.2085500 -0.8746300 0.2166800 0.2179100 -0.8481100 -0.0088526 -0.0088526 -0.0088526 -0.2236700 0.0000000 0.0000000 0.2313200 0.2313200 -0.8097200 -0.8097200 3.6569000 -0.0182160 -0.0182160 -0.8652300 -0.7980300 -0.8141700 -0.4823900 -0.8141300 -0.8106300 0.3156200 -0.8304900 0.1029300 0.1541200 -0.7162200 -0.7402800 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 -0.163 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 -0.163 6.3444522 12.5718248 1.2317396 8.9906415 3.1216123 13.0733951 1.2317396 -1.0901885 9.2999930 10.8759689 5.9651055 8.2294961 8.5928188 10.7001726 10.5263729 3.3021435 4.2317550 10.7022077 7.8197174 8.9210513 9.1357424 8.5822493 10.2712196 NA 9.8698259 9.2946079 2.3692431 NA 8.8828038 5.8640202 13.2112488 12.8519720 6.7171788 9.6033111 8.8669262 10.3245093 6.5097370 1.4947740 -1.0901885 4.5822489 9.8398222 9.2552293 7.3936401 11.3056259 9.4048695 5.2673747 9.6993576 5.9432462 9.5945726 1.7171664 13.0466550 2.3692431 3.6647104 10.3996971 7.3695424 0.4947740 7.2892028 6.9705201 3.2317550 0.9098115 14.4014580 NA 10.9589919 1.7171664 8.9651063 5.0183493 8.0570289 6.1192773 13.001660 8.997287 6.517154 11.294068 11.519695 10.543727 8.723605 12.558294 12.793282 10.993303 12.830270 12.047936 9.763134 6.981286 7.297842 8.629213 10.236254 11.265175 6.869826 8.537358 10.252454 9.154188 10.743299 4.637744 6.610263 12.807291 10.535076 -1.090189 10.121104 9.348460 13.697574 11.033299 6.336089 9.537358 8.744295 3.494787 10.169267 8.726808 10.114395 10.741923 11.186530 11.492672 11.201570 9.258552 NA 8.719158 6.658017 10.950114 8.431424 11.454064 7.810691 8.872966 15.052430 10.140445 9.732395 12.698950 11.693027 9.639445 -1.090189 TCGA-E9-A1N9 58 0 NA 1101 breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 4 1 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.213791e-06 2.774378e-07 10.2297585 10.5251133 12.0888505 9.1401774 8.0796357 8.5246683 10.7017000 10.2860059 9.9330109 14.3287752 10.3587450 11.1337693 0.8629076 11.9036934 4.4775996 8.7787694 6.6043575 9.1712291 8.3884109 13.0215786 -1.1370131 12.8313768 6.5908101 9.0403095 11.2775752 5.3864523 -1.1370131 8.1436378 11.1491589 -0.1371717 9.2870562 7.1390141 10.2165882 4.8852571 9.8621854 10.7607354 10.0452843 11.1834085 10.6810727 11.7783959 10.7282366 11.6258948 14.5957464 7.4294770 10.8783050 11.4174788 12.0767536 5.3706839 5.2722808 9.4544124 11.2080180 0.4478436 11.4581475 6.2975179 5.9181715 4.3223248 9.9031798 12.5171904 10.2455140 11.5498282 12.7094577 8.1780393 10.6838667 9.9019392 12.3725413 11.5211015 5.5211010 11.8602459 12.4628028 NA 10.1932467 9.0403095 3.5471537 4.9503518 8.8727186 10.0971086 10.1143724 9.1214561 2.6702512 8.6442496 12.7950125 11.8741172 10.7577078 9.8236159 -0.24727000 0.48045000 0.48045000 0.26514000 -0.03626500 -0.00581400 0.51842000 0.39263000 0.53925000 3.21400000 3.14720000 1.61250000 0.27300000 0.27300000 -0.14207000 3.32620000 -0.23826000 1.62730000 0.42016000 -0.28667000 -0.13807000 3.65690000 1.54160000 -0.00097017 -0.00097017 1.08310000 0.48630000 1.28340000 0.23876000 0.32109000 -0.24727000 -0.30193000 -0.11326000 -0.01271300 0.26702000 -0.01409000 -0.02821800 0.39263000 0.53925000 -0.01174900 0.22769000 0.02370600 -0.93622000 -0.19087000 -0.19087000 -0.19087000 0.20717000 0.27300000 0.27300000 -0.61316000 -0.14207000 -0.31105000 -0.31105000 0.58327000 -0.23533000 -0.23435000 -0.21305000 -0.13807000 -0.58235000 0.00000000 -0.31937000 -0.00097017 -0.08824200 -0.11221000 -0.01904000 -0.27906000 -0.58520000 -0.32333000 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 0.026 -0.177 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 0.026 -0.177 8.775779 12.600137 6.862890 9.622778 4.184820 11.903865 1.862908 NA 8.386452 9.109631 5.769780 9.035318 5.305832 10.233577 9.960264 3.447857 9.088097 9.817086 9.116737 9.308939 9.637941 7.717759 10.772408 1.184788 8.627761 9.483110 3.950356 1.670251 10.202183 3.322318 13.018104 11.838738 8.565063 10.634379 8.374643 9.378590 5.862890 1.447844 NA 3.563329 9.400108 9.071124 9.750111 4.535313 9.161147 5.386452 10.241185 7.148293 9.751633 -1.137013 12.084779 3.769782 4.563329 10.041449 5.056267 3.769782 8.827231 7.695780 7.022762 2.447844 14.161919 1.184788 10.685062 NA 8.960922 5.851574 8.508548 8.597600 12.450235 7.915458 9.018973 11.903693 9.678273 10.085081 13.021579 16.700228 8.667021 11.740558 13.091107 10.383018 9.454412 8.911377 3.032824 8.110817 10.918850 11.7580866 7.5031348 8.7802622 9.2807425 9.5877023 11.2827422 6.4174796 8.4117118 10.3587450 5.3706839 0.4478436 8.1757731 8.4254757 11.0415548 10.4136368 8.3687016 8.5103484 11.2324874 5.7208722 10.5394818 10.0452843 9.7455330 9.6376771 11.3071284 9.3795750 10.7527742 9.0747784 10.8720188 8.2390586 6.0820575 11.4581475 6.7083804 11.2688292 9.9031798 7.5975997 14.1076611 10.5080981 10.0202369 11.9879805 11.4881422 9.8401699 0.4478436 TCGA-E9-A1NA 58 0 NA 1112 breast stage iia t2 n0 m0 female 2011 NA yes mixed histology (please specify) 0 white not hispanic or latino NA NA 1 2 NA NA 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 5.895554e-07 9.7313715 10.6280448 11.5032824 9.7635480 9.2314929 9.5617089 9.3366576 10.0900878 10.0732092 14.4693667 11.0010382 11.2555950 0.8916525 12.0339626 2.2135650 9.7064922 8.5628888 8.5063528 9.3394149 11.5608232 3.6642325 14.2934779 5.1646616 9.1010961 10.2116912 6.3123058 -0.6933878 9.7185514 10.6415123 3.2135650 7.5474714 7.3592479 NA 3.7661075 9.7960266 10.2557775 9.2623303 10.6238103 9.7080932 10.6401152 2.8302350 10.3667007 14.3011001 8.1475840 9.1545207 10.7321585 11.5266051 4.0071237 6.6989977 9.1592099 12.1674763 -0.6933878 11.3568691 4.4965071 6.4513381 6.5209989 9.3828278 12.1196598 10.1470648 11.1582342 12.6847042 7.9213899 10.8890575 10.1879969 11.1336259 11.2318638 5.0481490 11.1965645 8.0088532 -0.1084253 10.5447865 8.8322011 0.8916525 6.8574274 10.3445704 9.9706831 10.0451949 9.5456821 2.0071237 6.0071192 12.0013647 11.6298759 8.3359678 9.6178610 -0.2911800 2.3799000 0.6097100 0.0643680 0.0341130 0.0280600 0.3987800 0.9175500 -0.7024400 -0.0015243 0.0258120 0.6840300 0.0225850 -0.0346310 -0.6632800 0.9081500 0.7147100 0.6144400 -0.0324500 0.0199230 0.7275400 -0.0495590 -0.0496950 -0.7094400 2.5837000 2.0119000 0.6535100 -0.0713380 0.2179100 -0.3275100 -0.1050000 -0.6917800 -0.7066600 0.2807400 0.1213800 0.8677100 0.0167050 -0.7445500 -0.7024400 -0.7273800 0.8884600 -0.3337600 0.0225850 -0.6968500 -0.6903300 -0.6903300 0.6708500 -0.0346310 -0.0467180 -0.4088200 0.5618700 -0.6872400 -0.3221700 -0.0139530 -0.3456100 0.6795700 -1.0217000 0.0000000 -0.6982100 -0.0083005 -0.7153300 -0.7066600 -0.3418200 -0.0959060 -0.4143200 0.0116790 0.1617500 -0.6901500 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 -0.112 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 -0.112 8.6172930 14.0282068 7.4462314 10.0058189 2.0346031 9.6364767 2.6286103 NA 8.4977397 7.8953947 NA 8.3261598 6.2433187 10.7506598 10.2695764 1.3066705 9.2803778 8.4487874 6.4816057 9.9296472 10.9535203 7.7118218 9.8105061 3.1140338 7.8497122 9.7722468 1.3066705 -0.6933878 11.4484682 1.6285870 12.3804035 12.8904095 7.8322014 10.0644869 9.5746374 9.3200031 5.4152043 3.5546134 -0.1084253 4.9648930 9.1188575 10.2996187 9.7203082 2.6286103 8.2813672 7.0945834 9.5462789 5.3727711 10.2928779 NA 10.5880309 4.1646576 2.3066705 9.7173172 5.0276406 3.2135650 9.7470305 8.9396756 5.1893225 3.5161286 13.8183712 -0.1084253 11.9572833 NA 7.7266405 3.7985379 7.9103069 8.6719093 14.704545 7.655408 8.413897 12.033963 10.420188 10.522820 11.560823 12.259695 9.387092 11.030981 13.756506 11.415695 9.159210 8.618429 1.891652 8.507579 11.439662 10.6252232 5.6375958 8.5149148 8.9958047 7.6598268 9.4999716 7.8282806 9.1124241 11.0010382 7.0036483 -0.6933878 5.1395718 8.0164880 10.3123049 8.8322011 7.1553030 9.8859963 12.4172452 4.7824138 11.0035197 9.2623303 10.4693863 9.7834265 10.7300589 10.6473650 10.0388478 8.7620076 4.2374184 8.8196184 5.1268573 11.3568691 8.9595253 10.2266610 9.3828278 7.9287321 15.0219452 10.3818252 9.7676480 11.7195148 11.0149021 9.1498162 2.3941300 TCGA-E9-A1NC 61 0 NA 1203 breast stage iib t2 n1 m0 female 2011 NA no mixed histology (please specify) 1 white not hispanic or latino NA NA 4 5 NA NA 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 4.508365e-07 8.91518863 7.94874100 10.01028570 7.13028843 9.14121359 8.25622568 8.93625042 10.05397745 13.12425974 12.22817838 10.38282621 9.71768602 -0.07917317 11.87193780 2.09075183 11.32304795 5.20623686 8.38640185 8.61606358 4.59325815 NA 8.28715735 8.78811405 9.92785558 10.49400902 5.77881571 -0.07917317 13.23821748 12.05734582 1.50578933 8.90240255 8.19695959 NA 6.36377908 9.46579963 9.95563422 8.85305000 8.26068530 9.16162647 9.26290995 0.92082683 5.97611843 15.91222424 6.55840234 9.82170208 9.50297716 8.63164163 3.00828967 1.72818175 8.46579983 9.33446325 1.24275492 10.55927116 6.38844099 6.49826363 6.73461615 9.53186000 11.82075856 10.33552055 12.23144804 12.36895156 8.61953993 10.35650556 9.94905220 10.43653510 9.56649363 3.09075183 11.47853828 10.43456287 6.03977667 10.42763864 11.02608905 2.66284352 4.89811643 10.65003113 9.56649363 10.63893995 8.76318547 3.38027230 7.71525093 12.66661461 11.85268079 8.91801466 10.53370379 0.02132300 0.02132300 0.34064000 -0.38739000 -0.00636680 -0.38291000 0.05979400 0.09754200 0.00485790 -0.00110870 -0.00110870 0.54118000 -0.01119800 0.01964300 0.00041593 0.00041593 0.00041593 0.40944000 -0.00539920 0.02286500 0.01359300 0.01698500 -0.41245000 -0.41245000 0.01474900 -0.02000100 -0.40827000 -0.00802440 -0.01711600 -0.41058000 0.02132300 -0.38179000 -0.38739000 -0.40838000 -0.38291000 -0.39837000 -0.39837000 -0.30991000 0.00485790 -0.34996000 -0.02041200 -0.39830000 -0.40429000 0.76619000 -0.36283000 -0.01505400 -0.39645000 0.00694350 -0.40141000 0.02328600 0.00041593 -0.40063000 -0.40595000 0.02398700 -0.00678130 -0.00678130 0.02286500 0.01359300 0.00597000 -0.40074000 -0.41245000 -0.41245000 0.01419000 -0.41399000 -0.00802440 -0.01037000 0.01084200 0.38584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 -0.113 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 -0.113 9.345002 14.808103 4.753728 9.930664 4.444395 12.447946 3.621278 3.444402 8.893815 10.734616 7.196960 7.557460 5.932064 10.955978 9.644496 3.965230 7.994977 9.517957 7.886620 10.256226 8.542393 6.295875 11.556553 2.920827 8.267349 11.585505 5.330225 NA 9.935553 1.728182 13.886484 12.403391 7.553830 10.269563 10.954602 10.389459 2.242755 2.920827 NA 6.178223 9.088253 10.916249 8.008298 8.037179 10.209407 8.631642 10.018209 6.550191 10.872120 4.206237 11.689226 2.242755 4.090760 9.762077 6.566710 8.024123 10.331287 8.734616 10.518422 8.665669 14.404399 NA 10.908099 -1.079173 9.199285 3.564695 8.154455 8.660616 12.697879 6.772584 7.624739 11.871938 10.243890 10.772975 4.593258 10.823587 8.865474 10.675305 13.133256 10.975440 8.465800 7.824717 1.242755 8.187622 9.518888 10.231448 4.728193 8.767892 8.755306 5.898114 8.646065 7.494483 5.675723 10.382826 6.635081 NA 9.200446 7.674286 11.771022 9.931363 7.827726 9.936947 6.313153 8.095761 9.860246 8.853050 10.705879 9.635939 10.620841 10.535085 9.791200 7.424661 NA 9.383961 9.105711 10.559271 6.708738 10.363779 9.531860 6.875032 14.929308 10.465800 10.324380 11.881561 10.693562 8.175864 2.920827 TCGA-E9-A1ND 75 0 NA 1266 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.629947e-06 4.508365e-07 9.4401408 9.1220996 11.3620374 8.5423033 8.3279464 9.3030524 9.7441054 10.2495700 11.3410684 12.6555847 10.0953279 10.1439298 1.8066128 11.3666864 1.5842410 11.6311308 7.5306529 8.8696364 4.8819142 3.3915890 NA 10.9084147 8.1259760 9.6439301 10.3980153 8.8114489 1.5842410 11.4328571 11.3296284 3.8572545 8.8541400 8.9722515 NA 5.4911252 9.7049039 10.4038810 9.7109386 10.0827510 9.2812017 11.2310928 1.9992785 6.7407387 14.0494179 7.3764389 9.0368187 10.5996492 10.5203813 2.9061594 NA 8.5070664 13.8907706 -1.0008659 9.4709468 6.8757887 8.1259760 4.9061643 10.7242117 11.6754491 10.4281552 10.9292697 12.7670423 7.5538604 10.6449301 10.0771488 11.3699590 10.5306531 4.1285574 12.8291925 6.5070668 NA 11.0313174 9.3223264 3.9100035 6.0545533 11.6458303 10.3245771 10.3623113 9.4881159 0.9992785 7.9992717 13.4611347 13.0332108 10.6226959 9.2683984 0.1914100 0.1914100 0.0476940 0.0175440 0.0193330 -0.2854900 -0.3006300 0.3427500 0.0349590 -0.2869100 -0.2869100 -0.2778600 -0.2711700 -0.2711700 -0.2742800 0.0251220 0.0251220 0.0063871 -0.2794100 0.1188800 0.0260920 -0.5859800 -0.2660000 -0.2660000 0.0379240 0.0345360 0.0345360 0.0269350 0.0245480 -0.2613100 0.1914100 -0.6723300 0.0175440 -0.2854900 0.0332670 -0.2801300 -0.5865700 -0.2863200 -0.2852500 0.0465590 0.3133800 0.1121300 -0.2869100 0.0109820 0.0420240 0.0420240 0.1677500 -0.2711700 -0.2648000 -0.2742800 0.0435820 0.1106700 0.1106700 0.0204830 -0.2788200 0.0311550 0.1188800 0.0260920 -0.2704500 0.3556100 -0.2660000 -0.2660000 -0.5874500 -0.5658500 0.0269350 0.0297470 0.0125160 -0.2587800 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 0.000 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 0.000 8.7985531 12.7977434 0.9992785 9.1038703 2.9061594 11.4755115 0.9992785 6.3480004 9.6796312 9.7806313 4.0867328 7.0980405 8.9836899 10.9911477 9.1195095 1.8066128 4.6997126 9.4463549 9.2892904 10.2105515 9.2503515 7.5189080 11.7744704 4.3568270 6.9001386 9.8688654 5.6139824 NA 11.2640074 0.9992785 12.7506065 12.3011965 9.0299387 9.7499787 11.9923869 9.9643344 6.1388227 1.9992785 -1.0008659 0.5841929 8.7969332 9.1477483 6.8819142 0.9992785 10.0231784 7.8226390 9.8933314 4.5538581 9.4961254 5.9534678 10.2292921 5.0867328 4.2471984 10.3195589 6.3843572 6.8940890 10.2672286 9.4750050 8.8849681 11.3296284 13.1911020 0.9992785 10.6614950 0.5841929 10.1553547 3.4586970 8.4086626 9.1259760 12.0085404 8.6699278 8.0299387 11.3666864 10.4535709 10.7109386 3.3915890 7.3166843 9.1641786 10.6765508 13.4683410 10.2933179 8.5070664 7.3346621 0.5841929 7.6286285 10.4318135 11.489872 4.086733 9.023026 8.963613 8.507066 10.058467 8.275396 5.208724 10.095328 9.259015 -1.000866 7.059967 9.927294 12.417388 10.677432 8.382976 8.980839 9.054554 7.787175 10.195037 9.710939 10.893710 9.697976 10.769936 10.781041 10.769936 8.950556 NA 10.556084 8.046396 9.470947 6.408663 10.750816 10.724212 7.237677 13.848286 10.269567 10.589391 12.736625 9.916644 9.623153 5.339123 TCGA-E9-A1NE 28 0 NA 1088 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 1.040392e-07 11.04557983 10.08884149 12.11530081 10.25439775 8.75037236 9.74454695 10.04466842 10.83462226 9.44853986 14.42216625 11.34957505 11.11008248 1.09484410 12.11147589 3.82276073 8.97519051 7.38255400 8.96751650 8.79441424 11.88580103 2.67980660 13.34269504 4.64943152 9.02631788 10.74791066 8.22283595 0.09477656 12.19927662 8.87538138 3.73870300 8.15823653 7.94189918 -0.32012585 5.23439402 10.36309122 10.12343846 9.74454695 10.86488612 9.87743047 11.56499213 1.09484410 11.10990821 14.32979005 7.99018964 9.81550498 11.54218326 11.65768033 5.30429564 3.87620259 9.97824869 12.46225643 NA 11.00398473 5.92773056 8.79528155 5.37096633 10.31703278 11.87291881 10.25786230 11.95039153 12.90992471 7.64366358 11.13940656 10.68368040 11.57777563 11.81743579 5.49572074 11.74903017 10.16361999 -0.90508835 10.16395579 9.79528139 3.38135260 7.05484414 9.96597687 10.54682541 10.55862151 10.51453861 4.24459027 8.39633805 13.04844704 12.88274424 9.91262487 9.20336611 0.1210800 0.1210800 0.1210800 -0.0661180 0.0000000 -0.0100940 0.3904800 0.2319400 -0.1708200 0.2105400 0.2105400 0.2105400 0.1700100 -0.0922830 -0.0769450 -0.0769450 -0.0769450 0.0533790 0.0533790 -0.0069195 -0.0895300 0.0052749 0.0153080 0.0153080 0.0153080 -0.0051227 -0.0051227 -0.0051227 0.1265300 0.1210800 0.1210800 0.0074014 -0.0661180 -0.0100940 -0.0381460 -0.0544200 -0.0544200 0.2319400 -0.1708200 -0.1708200 0.0907200 -0.2050500 0.2105400 -0.0370820 -0.0370820 -0.0370820 -0.0370820 -0.0922830 -0.0922830 0.0649400 -0.0769450 -0.0769450 -0.0769450 0.0533790 0.0533790 0.0533790 -0.1179000 -0.0895300 0.0052749 -0.0444150 0.0153080 0.0153080 -0.0247960 -0.0051227 -0.0051227 0.1265300 0.0223040 -0.1118200 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 10.70263434 12.27046920 5.88925693 10.25943445 6.21212183 10.13957732 5.35222886 1.09484410 8.25218855 7.55632135 -1.90508835 8.48277287 4.00173020 10.71116078 9.40659003 0.67978409 10.99966444 9.59717619 8.80994558 10.72442594 9.78770556 8.09343235 9.78527623 3.22411747 7.20858359 9.63835681 6.36630473 0.09477656 10.91860694 3.30429199 12.68992428 12.31423711 7.81764948 10.02594846 10.50926265 9.06494750 4.63400074 2.34278228 0.67978409 4.87620259 7.87783994 9.38197678 8.89816572 5.34276806 7.92711482 6.62231836 9.76017753 6.40772493 10.08671783 -1.90508835 10.95398818 4.11721296 4.02557812 9.71143640 6.10265393 7.20075053 9.83166637 9.66137141 8.11720932 -0.90508835 13.33417915 2.00173020 10.97977536 NA 7.88763188 4.53778682 7.58869740 8.21637532 13.3982300 6.7241987 8.7196373 12.1114759 10.4857952 10.6959160 11.8858010 11.9189054 9.3146152 11.4670266 13.4661759 11.4215521 9.9782487 8.3486892 0.9021894 8.1875990 11.9154196 11.25313577 5.97748372 9.03808906 9.06206800 8.42799705 10.38479141 8.85722369 8.50741172 11.34957505 5.84972910 0.09477656 6.18759951 7.27016635 11.24204659 11.26711293 9.45184370 9.51585455 12.56021677 8.38946227 12.40452052 9.74454695 10.56015301 9.59618137 11.03625612 10.08600920 10.73282501 9.27350657 -0.90508835 9.06340776 8.46334821 11.00398473 6.05484414 10.81833835 10.31703278 8.03000660 13.47952426 10.29082893 10.21313388 12.59050937 10.39605200 9.72009391 3.76726282 TCGA-E9-A1NF 60 1 1072 610 breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 1 2 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 2.774378e-07 10.3404133 9.9674715 11.0901371 8.1601165 8.5006603 10.0096740 9.2435327 10.3355825 11.0586559 12.5663446 10.0523605 10.6087202 0.8933622 12.0991233 3.4782988 9.6963849 6.0897269 8.5937698 9.0208947 11.8744216 1.3083609 11.5952141 5.6659186 9.5031122 10.3230855 6.4782923 -0.6915226 8.8377982 10.3710883 3.1157158 7.7800430 8.3417905 NA 5.7346310 9.6029883 10.1157226 9.4427938 10.2956315 9.9468035 10.6314224 0.3083609 10.4857872 15.8284184 8.3965461 9.7992185 10.3818397 10.8513994 4.8319279 5.7678004 9.2420582 11.3383449 NA 11.4431148 7.6347973 6.2625647 6.0632548 10.5704625 11.6615144 10.4498361 12.3314288 13.0877792 8.6482177 10.9549263 10.2108784 11.4628693 10.9737035 4.1663459 12.8585131 9.2552739 -0.6915226 10.6620658 9.1349160 3.4025994 6.2508820 10.7507928 10.4951009 9.9816766 9.6582017 2.6302890 8.9359014 13.0001111 11.8309491 9.4593841 10.0371384 -0.0219210 0.0893730 -0.2209600 -0.4178400 0.4691300 0.0901410 -0.4138800 -0.4655900 -0.1166500 -0.4429700 -0.4429700 0.4602400 -0.2239200 -0.1139100 -0.4186000 0.0065262 0.0065262 0.1517300 0.1517300 0.1380600 0.4640000 3.6569000 -0.2662500 -0.2662500 0.3016900 0.2507400 -0.7318700 -0.4400500 0.1291800 -0.1262000 -0.0219210 -0.7901700 -0.4178400 -0.0713380 0.1100800 0.0000000 0.0000000 -0.4655900 -0.1166500 0.1822300 -0.8007800 0.0065262 -0.4390800 -0.4202500 -0.4202500 -0.7480300 -0.0125760 -0.1139100 -0.1139100 -0.4186000 0.0065262 -0.3147100 -0.3147100 0.1517300 0.1517300 0.1535200 0.1380600 0.5394200 0.2686000 -0.2465500 -0.4248400 -0.2662500 -0.4104700 -0.1345800 -0.4404800 0.3181900 -0.4309400 -0.7464700 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 0.251 -0.150 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 0.095 -0.262 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 0.251 -0.150 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 0.095 -0.262 9.3097758 15.0510717 4.9522217 10.3541273 1.2902474 10.2748730 0.8933622 NA 8.0599117 9.6347971 NA 9.0286973 3.3083609 11.5923241 9.4427938 2.1157324 8.3307354 9.1475713 9.5383880 10.8240674 9.4239575 7.3527621 12.6274752 3.3958306 8.0962703 10.1577727 3.2152592 NA 10.6554352 2.4782988 13.1516998 12.9728149 8.8181424 9.8552620 9.8161622 8.9983656 5.1157241 1.3083609 NA 1.8933234 8.6593067 10.7135090 9.1507178 3.7678031 8.6129013 6.3744570 9.8191317 6.9665793 9.6132893 NA 11.0075062 4.8933282 3.8933331 9.8077650 5.9271925 2.3083609 10.1019709 9.1076492 6.4376505 3.7006838 14.4178310 1.3083609 10.7769916 NA 7.4782923 5.2152592 8.0157267 9.1879508 12.052810 5.115724 9.044769 12.099123 10.712445 10.177961 11.874422 16.091788 9.141258 10.269817 12.851037 9.675782 9.242058 8.203185 NA 7.742996 10.194064 10.983884 5.166350 9.029450 9.096270 7.503124 10.069819 6.816162 7.256735 10.052360 7.347287 1.630312 5.593769 6.578522 12.068672 10.819132 8.341791 9.410343 10.151503 4.593772 11.640586 9.442794 10.796710 9.922157 10.767799 10.008807 10.750793 8.786126 2.115732 9.320699 3.831928 11.443115 10.421459 10.763104 10.570462 7.001854 14.410302 10.583910 10.509879 11.945898 10.209989 9.543185 2.767803 TCGA-E9-A1NG 62 1 786 656 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 10.1170403 10.0708156 11.5752847 9.3506351 8.5583415 8.2343725 9.5425229 10.2767761 10.4183303 12.6646010 10.8122673 10.5386887 NA 12.2438234 2.9284082 10.4597835 5.6595850 8.5814620 7.7295609 12.2800481 1.9849903 12.8020307 5.0919029 9.7478813 9.6552332 5.3398286 -0.7154859 12.9232516 9.9596208 1.9849903 8.0377627 8.4891170 0.6064422 5.3179697 9.7972864 10.6154627 10.3330328 10.9765074 9.8793370 11.0084201 -1.7154859 8.0999290 15.7810564 7.4032012 9.3766422 11.4726710 11.2372871 4.4138310 2.8695161 9.4619654 11.9893141 3.3289370 11.9566397 7.8061462 7.2873605 5.0260121 10.8448787 11.6217496 10.6888892 12.4880468 12.5723304 8.5536727 11.3538278 10.7529637 11.2360128 11.0114026 4.9139043 11.7686135 7.8863166 -0.1305234 10.6028062 9.1401930 2.0919029 6.5085475 10.8244317 10.4888113 9.6288417 9.4817625 6.2387429 10.0963220 13.7541241 12.4540012 9.6431971 9.8100666 0.01195800 0.01195800 0.01195800 0.00000000 0.00000000 -0.00152430 -0.00013862 0.00000000 -0.00353620 0.01502800 0.01502800 0.01502800 0.00027728 0.00027728 -0.00387790 0.00485790 0.00485790 0.00527490 -0.00277070 -0.00871460 0.00124810 0.00263570 0.00458000 0.00458000 0.00458000 -0.28477000 0.00471900 0.30425000 0.01936300 0.01195800 0.01195800 -0.00373950 0.00000000 -0.00152430 -0.00413960 -0.00013862 -0.00013862 0.00000000 0.00000000 -0.00353620 -0.00761010 0.00212830 0.01502800 -0.00277070 -0.00277070 -0.00250770 -0.00110870 0.00027728 0.00027728 0.00173190 0.00485790 -0.31563000 -0.31622000 0.00527490 -0.00277070 -0.00277070 -0.00871460 0.00124810 0.00263570 -0.30663000 0.00458000 0.00458000 0.04670000 -0.31120000 0.30425000 0.01936300 0.00055459 -0.30733000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1249305 15.0280523 5.8992554 10.1637461 NA 10.3606934 0.2845141 NA 8.3289401 9.6221677 NA 8.9420608 3.9849812 10.3299643 8.8448787 -0.1305234 6.2788992 9.6002616 10.5172665 9.8149522 9.1778550 7.6177011 12.3540796 3.2387410 8.2929745 9.7908535 1.0918691 NA 10.8645688 1.9849903 12.4579888 12.2146364 8.1440805 10.4949128 9.2299897 9.5974287 6.1854127 3.1425278 -0.7154859 3.0394367 8.0141667 9.4437865 9.4380980 0.2845141 7.7258713 6.1914363 10.3292815 6.6019579 9.5928849 NA 10.4691113 5.8544022 4.3289370 9.8159225 5.9146315 1.7439888 9.6987026 9.6260647 6.4393638 8.9631461 13.6646687 1.7439888 10.3275732 -1.7154859 8.5525031 5.2034087 8.0293794 8.8638617 13.3756506 5.6420979 8.7582515 12.2438234 10.5401647 10.2056430 12.2800481 11.4202552 9.3878336 10.8501240 13.3154716 9.5300986 9.4619654 8.8246740 -0.1305234 7.4842179 10.9385105 11.0702027 5.6939357 9.3546668 8.6332739 8.4073740 10.0486503 7.8918760 6.5419329 10.8122673 7.7398731 1.0918691 7.2445475 6.6318566 12.8465497 10.5664759 7.8874119 8.6939368 11.0394334 5.2845474 11.4137242 10.3330328 10.5238461 9.6960568 11.0781492 10.2586020 10.4927802 9.3124519 -1.7154859 9.1488403 3.8695062 11.9566397 10.3435523 10.3131427 10.8448787 6.8959763 13.7043415 10.1618300 10.2514118 12.9674308 10.0239046 8.9823822 0.6064422 TCGA-E9-A1NH 71 0 NA 576 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 3 3 NA NA 1 1 4 4 1 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 9.9894618 9.9837381 11.4494126 9.3036255 8.1564922 9.5053038 9.3438988 10.2367545 10.4981837 12.6555635 11.0319890 9.8149278 1.6464392 12.9890650 3.5939632 9.5678506 6.6138675 8.1564922 10.1319765 13.2393589 -1.1610079 13.8057655 6.1610089 9.6896182 10.1468498 8.8048641 NA 9.1887701 10.7863515 3.4829386 6.7874468 7.7757176 -1.1610079 4.8834742 9.3975005 10.0654921 9.6302427 11.6049875 10.3269199 10.5066350 7.1699971 11.4618180 15.3090713 7.9649582 9.8683670 11.0958782 11.0813607 4.4537875 3.4829386 9.1233255 11.9810273 -0.1608466 10.9961109 6.7217226 6.1244812 4.5115060 10.3198700 12.0214742 10.7749815 12.3497204 13.1904332 8.3389258 11.0756920 10.2157479 11.1988294 10.8034207 4.5669978 13.0127569 9.7668578 3.2314017 10.3026042 8.6432108 3.2362018 5.6970621 11.1038156 10.2990237 9.4972912 9.4501046 3.4829386 10.1342747 13.6114975 11.4845131 10.0893782 9.9554238 -0.29863000 0.82333000 0.85245000 0.00847430 0.60575000 -0.29426000 0.02504800 0.00124810 -0.00067532 -0.30616000 -0.30616000 -0.61997000 0.01838300 0.01838300 -0.28857000 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.00833510 -0.29945000 -0.29945000 -0.29945000 -0.00637040 -0.00637040 0.00097064 0.02020300 -0.29863000 -0.29863000 0.00000000 0.01077300 -0.29426000 -0.30063000 0.02504800 0.02504800 0.00124810 -0.00067532 -0.00067532 0.01936300 -0.63093000 -0.30616000 0.00360760 0.00360760 0.00360760 0.00360760 0.00912640 0.04216600 -0.28857000 -0.28857000 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.01886800 -0.59828000 -0.29945000 -0.29945000 -0.28513000 -0.00637040 0.00097064 0.02020300 -0.30768000 -0.26631000 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.011 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 -0.299 0.852 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 -0.101 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.011 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 -0.299 0.852 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 -0.101 9.3646007 14.4018290 6.6204398 10.2249423 2.1610170 11.4925967 -0.1608466 NA 8.1811542 9.0412035 NA 8.6213083 3.1610008 10.3596985 9.6600565 1.1609847 7.7032662 9.3965436 11.4017992 9.5369162 9.5328369 8.0064978 11.9967425 4.0485326 7.4202803 9.9888270 4.1610089 NA 10.5364818 2.5395311 12.7108888 12.1692964 8.8517044 10.4245119 8.0774844 9.3811443 5.7579433 0.8390727 NA 5.9888278 8.4811314 9.5788604 9.5914604 3.1610008 9.1485106 5.6719698 9.8773130 7.3665565 9.2206228 NA 10.8266991 3.2314017 5.3148125 9.9393873 7.4671246 4.4240420 9.3616613 7.5498863 6.4901321 -0.1608466 13.7046681 1.1609847 10.1186904 NA 8.2119447 5.7579433 8.1587521 8.9038225 12.912492 4.745969 8.695505 12.989065 10.280986 10.751595 13.239359 12.118835 8.917231 10.435735 13.416686 8.582231 9.123326 9.506191 NA 7.239959 10.972222 11.4186314 6.3936685 8.6480440 8.6496514 6.9983456 10.6380416 7.0726997 8.1811542 11.0319890 7.0289039 2.0089888 7.5670000 6.0625017 11.6650323 10.2918358 7.5737896 8.4427063 11.5595378 4.7932769 11.2676703 9.6302427 10.3314337 9.3056662 10.9081938 9.9004510 10.4183957 8.9384275 -0.1608466 9.2170387 5.3468754 10.9961109 10.8714700 10.7907288 10.3198700 6.9838908 13.8492145 9.6978379 10.3636215 12.6876050 10.8534491 9.5132720 2.0089888 TCGA-E9-A1NI 51 0 NA 300 breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 10.1524938 9.6425393 11.3056529 8.2747164 9.6216852 9.0073034 9.4332624 9.8491156 9.9732867 13.2106206 10.7110003 10.4494908 7.0993162 12.7076308 2.7608384 9.2465114 5.8548135 8.2526900 9.6668026 12.8480958 3.9183767 13.9762300 2.9672793 10.2553757 10.7033515 6.2303222 2.0603933 11.5400386 11.1006870 2.6453558 6.0938200 7.4612764 NA 3.4527140 9.4234370 10.1871017 9.4069110 10.8081707 10.0813772 10.6723442 7.3732802 11.8167451 14.5703578 8.2629377 9.1767411 11.2328248 11.0297838 4.2698485 4.0603933 8.7486477 10.7306109 3.5198312 10.8298219 4.1047895 5.2698523 5.2698523 10.1458698 11.8254762 10.9476179 11.1832253 12.3724293 9.4256261 11.0691760 10.2271880 10.5136679 10.5542527 4.2698485 11.6285909 10.3101033 -0.9395375 10.7912919 9.2612960 4.1082819 5.4179504 11.1041081 10.5038589 10.3749805 9.6906643 1.8677384 9.0632122 12.9164337 11.5632291 9.9027476 9.3755469 -0.267330 0.468950 1.564000 0.047892 0.037396 -0.142320 0.229310 0.048087 0.048087 -0.635340 -0.635340 0.767920 -0.127460 -0.127460 -0.046718 -0.046718 -0.046718 0.388930 0.388930 0.125050 0.339660 0.160550 0.037641 0.037641 0.896080 -0.315840 -0.315520 -0.343890 0.753050 -0.281190 -0.667720 -0.481870 0.048699 -0.142320 -0.095120 0.229310 0.229310 0.048087 0.048087 0.319960 -0.050911 -0.055792 -0.635340 -0.586880 -0.586880 -0.570640 -0.561370 -0.127460 -0.127460 -0.046718 -0.046718 -0.649490 -0.649490 0.388930 0.388930 0.388930 -0.168830 0.351370 -0.191370 -0.583330 0.037641 0.055515 0.129180 -0.298510 -0.343890 0.753050 -0.038170 -0.535510 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 0.000 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 0.000 8.16368489 14.08791457 7.03767763 10.00803428 NA 10.82982190 NA NA 8.35501803 9.61402661 0.64533275 7.31665353 3.58396429 10.28439892 8.88694576 3.81528850 6.90588757 9.34232740 5.61498658 11.55700143 9.63304062 6.76083702 11.05863511 1.64537887 9.61498621 9.26252101 4.76083835 NA 10.91798953 1.06039331 12.74646003 12.33375582 8.67326561 10.25638456 10.72484456 9.79510683 4.64536158 0.64533275 -0.93953751 11.59104748 9.00584122 10.50334078 9.50022823 1.86773835 8.70060617 7.91837848 10.96465558 6.29880126 10.12850375 0.06046249 10.14054862 1.38233524 3.64535581 9.64606399 6.73331773 0.06046249 9.13854802 8.02906411 6.51160877 1.64537887 14.07066312 -0.93953751 10.25822823 NA 7.00876474 4.14786022 8.04623948 9.32952392 13.523635 6.503341 9.066022 12.707631 10.458072 11.983539 12.848096 11.989656 9.001445 10.736795 12.876381 9.930762 8.748648 9.804390 1.382335 7.841757 12.157606 10.4777224 7.0883028 8.7849113 9.3811979 8.8942836 9.6702317 5.7883177 7.7042537 10.7110003 5.7328227 2.5198186 6.6072918 7.9591198 10.7195013 9.7159280 9.2755663 9.5208532 10.6500485 2.8677581 12.0170584 9.4069110 10.8442140 10.3277692 11.6575187 9.7319384 9.9881753 8.1999486 -0.9395375 8.5947195 2.8677581 10.8298219 8.6714222 10.0014449 10.1458698 6.7042537 13.0529816 10.4660706 9.9970352 12.4261729 10.6430097 8.9612642 NA TCGA-E9-A1QZ 61 0 NA 755 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 4 NA NA 3 4 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 3.467973e-08 10.2671055 9.6975334 11.4764819 8.7376178 8.8987311 9.5130847 8.6211134 9.8324912 9.4405042 13.3487400 11.6703571 10.7547157 1.7407117 12.8230257 3.2812680 8.9528047 6.1267540 8.9465996 9.7519224 11.9667789 0.8662354 13.3964292 4.8048280 9.4284684 10.4057080 6.7569966 NA 10.1274748 9.8145934 3.3256598 7.0260973 7.3687265 0.6032168 3.0886165 10.0163964 11.6638876 9.9439319 10.5544764 9.4227321 11.3834033 4.8358534 10.4166522 14.2717443 8.1305906 8.7138054 11.1450627 11.3458379 4.4310078 1.2812531 9.3799536 12.0052444 NA 11.0500682 5.7650785 7.2090419 6.7930167 10.4015014 11.7081835 10.4069999 11.2865372 12.7689780 8.7458094 10.9679829 10.6976125 11.2419896 10.8339327 4.4710899 11.8720845 9.7791154 0.2813125 10.8274346 9.4278322 2.8692200 6.8586922 10.4063542 9.8936713 10.5076757 9.8601080 3.5666691 7.2924910 12.3334920 12.3359527 9.7691036 9.0419835 -0.078677 0.495800 0.495800 0.000000 0.000000 0.075847 0.070960 -0.116260 -0.116260 0.064511 0.064511 0.064511 -0.090626 -0.090626 0.051956 2.439500 3.090800 0.067375 0.067375 -0.092610 -0.169930 -0.089699 -0.266250 0.333990 0.333990 -0.118870 -0.118870 -0.125990 0.367230 -0.109640 -0.078677 -0.087712 0.000000 0.075847 0.075847 0.070960 0.070960 -0.116260 -0.116260 -0.251520 0.225610 0.223790 0.064511 -0.201620 -0.201620 -0.201620 -0.201620 -0.090626 -0.090626 0.051956 0.051956 -0.249020 -0.249020 0.067375 0.067375 0.067375 -0.092610 -0.169930 -0.089699 -0.254910 -0.266250 0.333990 -0.073877 -0.118870 -0.118870 0.367230 0.083557 0.054376 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 0.000 10.2336408 11.3627470 5.0494478 9.5844734 5.8462526 9.8477934 4.8048280 2.6735790 8.6917149 9.1078121 0.2813125 8.2423224 6.0691651 10.6919799 9.0797354 2.8048177 9.8681033 9.2398162 7.3473530 10.9361233 9.9489960 6.8511194 11.8762879 3.0361516 9.0576967 9.8218760 4.4907177 -0.1338437 10.7151098 4.0886165 12.9665599 11.9720255 8.3036314 10.1787309 10.3554051 9.0344804 2.9817066 1.8662354 2.0886165 4.4105446 8.9817034 8.6054440 9.6216700 7.4561893 6.7131789 4.8811752 10.2303607 4.3473538 10.3746811 1.4511715 10.7638194 2.1881477 4.6031931 10.2369388 6.9537599 6.6475865 10.1376891 8.6789381 6.8511194 NA 13.7636934 2.2812531 10.5178757 NA 7.4858349 5.7075276 7.9269222 9.0926382 15.016600 6.703328 9.298768 12.823026 10.449936 11.088417 11.966779 12.208486 11.287614 10.885817 13.612215 10.581330 9.379954 8.634410 2.088617 7.750905 11.317609 10.664698 7.932315 9.002363 7.667126 9.737618 9.255370 7.883034 7.194153 11.670357 5.988623 3.566669 7.088619 7.402460 10.627223 10.675190 9.552727 8.340608 11.778117 7.645398 13.606657 9.943932 10.600653 9.789058 10.989701 9.297375 10.376990 8.574735 -1.718806 8.739444 8.805805 11.050068 5.974750 10.490717 10.401501 6.992070 13.981541 10.384551 10.362747 12.724984 9.357411 9.360082 2.529196 TCGA-E9-A1R0 58 0 NA 860 breast stage iia t1c n1 m0 female 2011 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 9.975250 9.469418 11.808317 9.167790 8.458033 8.574712 10.444432 9.297179 10.482786 13.011110 11.801340 10.880346 2.317883 13.045049 3.552340 9.302549 6.965126 8.254171 10.451399 13.330750 1.037804 14.265516 4.037769 9.102068 11.177871 7.581356 0.230449 9.447162 8.296506 2.400347 7.464036 7.005203 -0.769551 3.722269 9.711711 10.241644 11.348222 11.190600 9.221938 11.052191 1.552328 10.461638 14.532663 7.693103 10.525609 10.738459 10.425789 5.088396 8.037772 9.075122 13.831026 -0.769551 11.498959 6.693941 5.100780 4.459235 10.456226 11.707922 10.322513 12.057660 12.531055 7.863412 11.084311 10.887065 11.518562 11.132226 5.141510 12.252177 12.370048 -0.769551 10.466431 8.923032 2.623422 4.497204 10.256594 9.867494 10.179514 9.986139 2.552352 9.583012 13.300496 12.205906 10.075907 9.416531 -0.0012473 -0.0012473 -0.0012473 0.0105640 0.0105640 0.0126550 0.0066653 0.0056945 -0.4715900 0.0037465 0.0037465 0.0037465 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0052749 0.0017129 0.5199600 -0.5066000 -0.0139530 -0.0078863 -0.0219210 -0.0219210 -0.0219210 -0.0131270 -0.0012473 -0.0012473 -0.0184900 0.0105640 0.0126550 0.0126550 0.0066653 0.0066653 0.0063871 -0.4715900 -0.4887400 0.0053980 0.0068588 0.0037465 -0.0029091 -0.0029091 -0.0029091 -0.0029091 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0037465 0.0052749 0.0017129 0.0512450 -0.5144500 -0.5066000 -0.0139530 0.0056919 -0.0219210 -0.0219210 -0.0131270 -0.4106900 -0.0172540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.295159 12.673101 9.266590 9.535338 4.184614 10.768120 3.317883 2.552352 8.628091 9.299866 NA 8.115762 5.998602 9.822406 9.102322 3.184614 9.252091 9.100781 10.604369 9.749070 10.046428 7.338941 11.895752 3.088396 9.888182 10.505668 8.986973 NA 10.304223 3.230418 13.368848 12.009007 7.909897 9.669208 7.430089 9.258322 1.400319 2.753968 -0.769551 6.592360 8.938638 9.395324 9.565249 7.439870 8.155615 7.008494 9.864320 4.902841 9.542732 1.815370 10.710702 2.230418 5.648270 9.673966 6.424139 6.125234 9.559652 7.815379 8.670247 NA 13.791734 2.985300 10.360343 NA 7.807846 6.050595 7.786922 8.312566 14.2622575 4.6898471 8.5978313 13.0450491 10.1335452 10.0105461 13.3307504 14.1485577 9.0003947 10.7220191 12.8014581 10.1878814 9.0751224 9.6493232 -0.1845885 7.7676349 10.8726939 11.1138235 6.6898485 9.2856991 9.1500247 8.6908724 10.4392849 6.8303289 8.2583225 11.8013396 6.3441592 1.2303875 7.3018793 6.6662112 10.1293957 10.2137665 7.4196484 8.2597037 11.4482228 7.2444371 11.5533784 11.3482220 10.6647841 9.8674942 9.5846659 9.7936127 10.5464152 9.3915484 -0.1845885 9.3973454 7.4925118 11.4989585 6.5613338 10.5772073 10.4562265 7.0601393 14.1355215 10.8305618 10.6587768 12.4043279 10.5284791 9.7821248 3.4783377 TCGA-E9-A1R2 51 0 NA 1063 breast stage iiic t2 n3 mx female 2011 NA yes infiltrating ductal carcinoma 17 white not hispanic or latino NA NA 1 6 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.121176e-07 9.868333 9.877533 12.058313 9.213921 8.986865 9.522602 10.402720 10.464611 9.786539 14.331278 11.774466 10.784283 2.049561 13.585550 4.237197 8.587007 6.434236 8.665918 8.706197 12.446416 2.580097 14.204180 5.219498 9.020478 10.782023 6.706196 NA 10.125195 8.318440 2.580097 8.717276 6.890876 -1.120294 3.833841 10.030030 9.972405 9.342150 11.574224 10.191396 11.506270 10.503072 11.067928 14.305225 7.553770 10.553840 11.331374 11.777872 4.580085 6.019199 8.964456 11.121035 NA 10.540090 4.580085 5.924043 5.108466 9.838926 12.108166 10.438069 11.473273 12.776926 8.765344 11.643898 11.351100 11.239123 11.244056 5.322592 11.571610 11.626162 -1.120294 10.475372 9.714119 4.098428 4.902016 10.503530 10.620694 11.193665 10.461790 5.418807 10.245970 12.054886 11.617951 10.214480 9.394362 -5.8829e-01 5.3071e-01 5.3071e-01 5.4736e-03 -4.3718e-03 1.3077e-03 -2.8496e-03 -2.2959e-02 -6.0047e-01 3.6569e+00 2.8247e+00 1.1971e+00 -1.1965e-02 5.8871e-03 3.1118e-03 3.2507e-03 3.2507e-03 1.5088e-02 1.5088e-02 5.5096e-01 5.9565e-05 5.6126e-03 1.0302e-03 5.2791e-01 5.2791e-01 -2.6245e-02 -5.7709e-01 -2.5424e-02 5.4814e-01 -6.8601e-03 -5.8829e-01 -8.7933e-03 -5.9015e-01 1.3077e-03 1.6066e-02 -2.8496e-03 -2.8496e-03 -2.2959e-02 -5.9278e-01 1.7239e-03 0.0000e+00 -4.9489e-04 -6.1706e-01 -5.8751e-01 -5.8751e-01 2.1401e-03 2.1401e-03 -5.8623e-01 -5.8623e-01 -5.8946e-01 3.1118e-03 -5.8695e-01 -5.8853e-01 1.5088e-02 1.5088e-02 -5.9347e-01 -5.8260e-01 -5.9122e-01 5.6126e-03 -5.9522e-01 -5.8584e-01 5.2791e-01 5.4990e-01 -5.9230e-01 4.4773e-01 6.0297e-03 -5.4767e-02 -5.8839e-01 0.000 0.000 0.000 -0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.059 1.197 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 -0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.059 1.197 -0.588 0.000 0.000 0.000 8.7744659 12.8678889 7.5017003 10.0921444 3.1092435 11.3794939 2.7865336 0.4645637 8.6328647 7.7500129 0.4645637 7.9170301 4.0089350 10.6651006 9.6328647 4.5520758 8.4188068 9.8425441 9.7576990 10.4846645 10.2085642 7.7438340 10.7496274 2.5800972 9.0140743 9.3983012 2.7865336 0.8796274 11.4051689 2.2015711 12.1402736 12.3594283 7.8511918 9.2932760 9.6253224 9.5981809 5.8103865 -0.1202942 NA 3.9240429 8.7188517 9.1879872 8.4090786 5.0495741 8.9309522 6.5449845 9.7857871 5.6345352 10.1936648 -1.1202942 10.6215363 2.3390804 5.2194977 9.9046700 6.7512454 4.2371966 9.4120041 7.8014891 7.1604191 0.4645637 13.5689363 0.8796274 11.0473798 NA 8.6805480 5.3390804 8.2826599 7.7895408 13.8335294 5.7865389 8.8192272 13.5855504 10.5257567 10.7854111 12.4464156 12.6449342 9.6227995 10.6519626 12.4687140 11.6534054 8.9644564 9.0939671 -0.1202942 7.8964565 12.3594283 11.4523483 5.9457364 8.0115051 8.2371999 9.1180529 10.3140313 6.4110296 8.2415919 11.7744658 5.0694745 0.4645637 7.7592311 7.7219673 10.4192915 9.8718783 9.2730386 8.9564636 11.1141661 6.1084659 12.0328438 9.3421502 9.8985436 10.3594284 11.8400121 11.1857097 10.7507833 8.4129779 -1.1202942 9.1017184 6.0495741 10.5400897 5.8569284 10.9233589 9.8389256 7.0395190 12.9105738 10.3684924 9.8126009 13.2727033 10.2584848 9.8859742 1.2015711 TCGA-E9-A1R3 70 0 NA 78 breast stage iiic t2 n3 m0 female 2010 NA yes infiltrating ductal carcinoma 10 white not hispanic or latino NA NA 3 3 NA NA 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 10.9508904 10.4543570 11.2567358 9.7985222 8.5897279 9.3521695 9.9751501 10.3276313 9.4877112 14.0202404 10.7828127 10.8682349 1.0028825 12.1079783 3.2882847 10.0736801 5.2790143 8.6981167 9.4302012 12.8328092 5.1526337 13.2443501 5.0252548 9.9571900 10.4806465 8.9722748 NA 12.6978990 10.8062122 2.9097731 7.7015927 8.3615394 NA 4.5574775 10.6931045 11.3119383 10.5425318 12.0067575 10.2293005 10.6205853 7.0335552 10.1215050 14.6044560 8.2117691 8.5205578 11.4020327 11.2765382 3.7033333 3.1321655 9.1957974 11.0828730 NA 11.3993593 4.9336246 6.7809649 5.6893886 11.2127985 11.9284427 10.0025360 12.3437120 13.1376755 8.4354302 11.5956957 10.8305922 11.3660649 10.8194720 5.5027348 11.7535953 9.7911987 0.3248106 10.9297402 9.5995439 2.9580074 6.3560346 11.1539048 10.0414644 10.1985681 10.0155128 1.9097731 10.2567358 13.6296810 11.2402477 9.9354721 9.2293005 -0.32412000 0.91804000 0.91804000 0.01530800 0.00000000 -0.31761000 0.32334000 -0.00277070 -0.00277070 0.31370000 0.31370000 0.31370000 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00912860 -0.00041585 -0.00041585 0.67307000 0.00235810 0.30346000 0.02763800 0.02763800 0.02763800 -0.26287000 -0.26287000 -0.25213000 0.30250000 -0.30004000 -0.32412000 -0.00304750 0.01530800 -0.66217000 -0.31972000 0.32334000 0.32334000 -0.02096300 -0.00277070 -0.00277070 0.93345000 -0.64856000 0.31370000 0.00027728 0.00027728 0.00027728 0.00027728 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00912860 -0.00912860 -0.00041585 -0.00041585 -0.00041585 0.67307000 0.00235810 0.30346000 -0.32193000 0.02763800 0.02763800 0.30138000 -0.26287000 -0.25213000 0.30250000 -0.00705760 -0.48195000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.876 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.876 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 0.000 8.760278174 14.550701610 6.090351702 10.022131552 2.909773104 10.370303036 1.810237431 0.810237431 7.380099101 8.534269806 -0.997117491 8.871085887 2.462314127 10.750242117 9.292330837 1.462314127 8.172813509 9.454614534 12.556757522 10.220846009 9.006125195 7.780965542 10.587615989 3.557471360 8.068977609 9.509195831 1.324810603 NA 10.586206101 2.090345350 12.741350037 12.200258566 8.004296322 10.877677542 7.692886058 8.731659128 4.132173753 2.526444465 0.002882509 2.810237431 8.129592648 9.311227216 9.339952635 2.395199931 8.761328163 5.723987156 10.397886797 7.508699608 9.469984239 NA 11.460269173 2.957078819 4.587851008 9.133651883 6.310636410 4.587851008 10.262337311 8.398422202 4.797303563 1.324810603 13.747853472 0.002882509 10.308949998 0.587845009 8.644036876 4.526450725 8.794051247 9.725695833 12.863672 3.810248 8.416516 12.107978 11.237257 10.900356 12.832809 12.364969 9.290601 11.016734 13.384668 7.921752 9.195797 9.787114 -1.997117 8.026642 11.679507 10.991750420 6.466413408 9.208681610 8.962890223 7.610218729 10.243417269 6.549783128 8.348293510 10.782812743 6.568942625 1.909773104 6.900734001 6.087324930 11.953353062 10.210512699 8.176565628 8.685882697 12.000597031 4.909777904 11.527087152 10.542531819 10.577245269 9.371940395 11.545678361 10.429415111 10.478621703 9.614835154 -1.997117491 9.181403744 5.222054894 11.399359271 8.906016899 10.467178792 11.212798511 6.945402867 13.656629063 10.194872807 10.717563076 12.922356869 9.832214542 9.893912461 0.002882509 TCGA-E9-A1R4 66 0 NA 186 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 1 2 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-06 6.935946e-07 10.4114437 10.4744571 11.1454595 10.0350355 8.7076321 10.3617645 10.1484935 9.4127062 9.1565534 13.0960916 9.8146454 10.3539001 -1.3313362 12.2923662 3.0610331 9.8101818 6.4368981 8.1705505 8.2423605 12.2436615 -1.3313362 13.3783356 2.4760706 9.0921863 11.0224115 9.2574279 0.6687545 14.1772459 11.6463510 1.6687092 8.0781044 6.6112285 NA 3.7561800 10.2834232 9.7941268 9.2242610 10.8069851 9.3552139 10.9895138 5.6229099 10.9442558 14.4531436 8.3035063 10.6481384 11.0588822 11.2297625 2.9166486 4.1281449 9.0534969 12.2339344 NA 10.7371556 7.6771417 7.6287153 5.0949792 10.4651585 11.4677925 10.2893913 11.0166114 12.9311752 8.4185825 11.0807538 10.5587115 11.0118990 10.8451981 4.3966322 11.1017770 8.2980699 -0.3313362 10.7011034 9.0317530 3.0842004 6.7561760 10.6566878 9.9633340 10.6830825 10.1600653 5.0949792 9.1291691 12.0894630 11.1286571 9.3863898 9.6236366 -0.348360 0.221450 0.025952 0.299310 -0.094724 -0.331910 0.170910 0.000000 -0.051316 0.053948 0.053948 0.832940 -0.081605 1.235100 0.217760 0.046984 0.046984 -0.646590 0.014664 -0.058462 0.263880 -0.055903 -0.350880 0.147120 0.147120 -0.061243 -0.061243 -0.047395 0.205800 -0.061823 -0.348360 0.209320 -0.344690 -0.062621 -0.338390 0.170910 0.170910 0.000000 0.000000 -0.360650 0.716970 -0.348130 0.053948 -0.350240 -0.350240 0.141470 0.215450 -0.092742 1.041500 0.217760 0.046984 -0.061420 -0.071047 -0.646590 0.014664 -0.058193 -0.058462 -0.347560 -0.358170 -0.356350 -0.350880 0.147120 0.225300 -0.029994 -0.047395 0.205800 -0.336640 -0.679410 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.269 0.171 0.171 -0.336 -0.336 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 -0.156 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.269 0.171 0.171 -0.336 -0.336 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 -0.156 9.2880161 12.7229784 2.9166486 9.8799932 4.1605653 10.7418506 2.2536868 NA 7.8903002 6.5204615 0.2536263 8.6229095 2.4760706 10.8738956 9.0663879 2.6687092 8.3481935 9.4000324 8.8647006 9.4244355 9.6728705 7.6687134 10.6163502 4.3966322 8.5235816 9.3017084 3.1281449 NA 11.0952401 3.1281449 11.9938782 11.7908941 6.7928345 10.1947234 9.6488528 9.3525851 5.2980681 1.4760706 0.2536263 3.7979987 8.2020430 9.5528839 9.8311045 3.2536717 9.2206811 8.4936721 9.5778563 7.1116563 9.5189002 NA 11.1439400 3.6229069 4.0610331 8.9127678 6.9938385 4.7561747 10.1595641 9.1495035 8.8082647 1.2536868 13.2710642 NA 10.4780794 -1.3313362 7.7048872 3.5756028 7.9610346 8.9425089 12.226822 6.949484 7.963334 12.292366 10.143433 10.072258 12.243662 11.875422 8.707632 9.928456 12.493274 9.700070 9.053497 8.180466 3.668709 8.015227 12.140134 11.2649030 6.9023329 8.4824946 8.9225606 9.3402543 10.6965501 8.4402027 9.1932550 9.8146454 8.5860854 -0.3313362 3.3125635 7.8580189 9.9142660 10.7445266 9.2574279 9.8423904 12.0631760 7.0907783 12.2284381 9.2242610 10.2541453 10.0284628 11.0596883 10.0024277 11.0559228 9.6016662 -0.3313362 10.0255778 6.0865651 10.7371556 5.8781662 10.8050636 10.4651585 8.0459240 12.5437906 10.2806602 10.1530327 12.5587875 10.1680609 10.2667658 1.4760706 TCGA-E9-A1R5 63 0 NA 92 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 2 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 10.68266494 10.52009876 10.94421109 9.93626367 9.35033480 9.34379532 8.60610128 9.27976424 9.50682585 12.30439085 10.75783108 10.29415731 0.97673022 13.38609139 4.34597822 8.53388918 4.69556517 8.62899226 6.35178378 12.77636357 0.71369581 13.20786580 4.32251948 9.61712213 11.08134342 5.82641120 -0.02326978 10.27749001 9.48849734 3.24976388 6.47924511 7.89957686 -0.02326978 4.19913835 9.28508359 10.40300936 10.52685014 11.01908806 9.97721423 11.35323186 0.97673022 8.72605531 14.64298714 9.30342871 9.18701004 12.41510335 12.87603863 4.32251948 4.91534402 9.18863286 11.20175122 -0.60823228 11.35087848 8.29113892 4.83472638 4.86751598 10.42967224 11.88300895 11.02613948 12.23442713 12.99755101 8.48717922 11.29716917 10.78631186 11.81568589 10.58469141 5.17314343 11.80196847 10.89262402 -1.60823228 10.30691463 9.57293437 2.64045897 4.62059814 10.79479420 10.62150228 10.17109108 10.33209575 2.39179521 7.33722583 11.83446651 11.20536294 9.94876713 8.52620852 0.48079000 1.57140000 1.61530000 0.00666530 -0.00245440 0.00444110 0.58621000 -0.00055444 -0.00055444 -0.66244000 -0.66244000 -0.68058000 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00429290 -0.00439830 -0.00439830 0.02637300 -0.11678000 0.01167900 -0.02096100 0.57773000 0.57773000 -0.00498440 -0.00498440 -0.00498440 0.57987000 -0.65803000 -0.65314000 -0.00152430 0.00666530 0.00444110 0.00444110 0.58621000 0.59890000 -0.01513100 -0.00055444 -0.00055444 0.00000000 0.00000000 -0.66244000 -0.02329200 -0.02329200 -0.02329200 -0.02329200 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00439830 -0.00439830 -0.00439830 0.00166420 -0.11678000 0.01212700 -0.65557000 -0.02096100 0.57773000 -0.01532900 -0.00498440 -0.00498440 0.59458000 -0.01354000 0.00777830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.578 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.578 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 0.000 8.69670365 13.92611543 10.57386604 9.79479420 1.58241149 9.85479562 -1.60823228 NA 8.46324439 8.31362317 NA 7.94249046 6.66790631 10.24235968 8.96921094 -0.02326978 7.96921094 9.33868848 8.22625322 10.12606841 9.39474478 7.41968804 10.13619562 1.71369581 5.74050937 9.45247807 0.39176772 -1.60823228 10.99749311 2.71371781 12.47833308 11.16079347 7.72045701 10.13409154 8.23256003 9.18050047 4.50030493 -0.02326978 -1.60823228 4.29867298 8.56670786 9.31733663 9.97862195 3.71370681 7.94890099 6.38613496 10.49441401 7.73607784 9.73107545 NA 10.68295281 2.91534880 4.54152723 9.56781807 5.48707468 1.56169272 8.73385696 7.08526955 5.86751598 NA 14.06019627 -0.02326978 9.71032500 -1.60823228 8.74272138 4.09222436 7.99355266 9.10860156 12.7648097 5.1991384 9.0517780 13.3860914 10.1959131 11.7688571 12.7763636 12.4307011 9.2119610 10.6100426 13.8675156 10.2454815 9.1886329 9.1796847 0.7136958 8.2544197 11.5037328 10.813321 9.165745 8.373349 8.221505 8.767908 9.720934 4.961637 5.801174 10.757831 5.159968 2.199123 4.369062 5.726725 10.714274 10.322519 8.618194 8.012002 12.484787 4.173143 12.212562 10.526850 10.099573 9.799581 12.610572 9.480570 10.520421 9.528133 NA 9.227012 3.146672 11.350878 8.860406 9.960859 10.429672 6.946371 13.107530 9.368346 10.625701 12.975629 10.068180 10.654464 2.092207 TCGA-E9-A1R6 63 0 NA 339 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 8.4096442 9.7736756 11.5831768 8.7706655 8.8423745 8.3235354 10.2341456 9.0572109 9.4150522 13.7108756 9.3045142 10.3157091 -1.4544269 13.8126472 2.2458911 9.1820829 5.9717229 8.3235354 8.7862497 13.0265008 2.2458911 14.2149800 0.1304038 9.6550342 11.2652748 5.4761970 NA 9.0699999 8.6209375 -1.4544269 9.4387598 6.7153827 0.8674221 3.5898474 9.7365174 10.2045622 9.6760288 9.8343242 9.6175909 10.4780421 1.3528150 11.6637504 14.5945410 8.4949788 10.6014151 11.5261333 10.9829502 4.1893106 4.4523516 8.7203838 10.3362140 -1.4544269 10.3491858 5.5898534 4.4034382 4.1893106 9.3878086 11.4941905 10.3459537 10.7469696 12.4013000 8.5255979 10.9356272 9.1620071 10.9348207 10.8687945 4.7352839 10.8492389 11.7501822 -0.4546246 10.8543660 9.1453710 2.8688250 4.7153827 10.5695590 9.8215827 11.0940393 10.0012991 4.4523516 5.1000483 11.1541751 9.8713257 10.0699999 8.7969406 -0.09881400 -0.09881400 -0.11693000 0.00000000 0.00000000 0.36395000 0.41396000 -0.12836000 -0.12836000 0.75757000 0.75757000 0.75757000 0.00652620 0.00652620 0.11038000 0.11038000 0.11038000 0.39512000 0.37798000 -0.42287000 -0.41300000 0.02567100 0.45871000 0.45871000 0.45871000 0.20509000 0.20509000 0.20509000 0.89387000 -0.09881400 -0.09881400 -0.08678400 0.00000000 0.38766000 0.37331000 0.41396000 0.41396000 -0.12836000 -0.12836000 -0.12836000 -0.01216200 -0.43094000 0.75757000 -0.46717000 -0.46717000 -0.46717000 -0.46717000 0.00652620 0.00652620 0.11038000 0.11038000 0.11038000 0.11038000 0.39512000 0.37798000 0.37798000 -0.41553000 -0.41300000 0.02567100 -0.49722000 -0.39919000 0.45871000 0.51350000 0.18132000 0.20509000 -0.84419000 -0.00097017 -0.38627000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 0.000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 0.000 8.0007854 13.2250483 7.8763751 9.1857030 3.6329196 10.6118838 0.5454742 NA 8.1693398 8.3528132 0.8674221 6.8897546 5.4523483 10.3905561 9.4590957 1.8673825 4.4281022 7.9654184 7.4003270 10.7847584 9.8790945 7.3688251 10.9479374 1.5704629 10.1176848 9.3688255 1.1304038 -1.4544269 11.0082161 1.7153663 12.5283627 11.7051719 7.1228870 9.8975017 8.0631276 9.6461205 3.9717275 0.8674221 0.1304038 2.9377775 9.9232110 10.0458022 9.6798845 1.8673825 8.3836222 7.8354770 10.0383128 6.8583416 10.1369806 NA 10.8950159 2.2458911 3.8673825 9.5576846 7.0054224 1.7153663 9.8400789 7.2801676 3.6747431 -0.4546246 13.6497293 1.3528150 10.8665408 NA 8.9302421 4.7742758 7.8515198 8.7166350 14.220664 6.534143 9.356833 13.812647 9.318597 10.484670 13.026501 13.125717 8.953353 10.794275 11.894186 10.951663 8.720384 8.238945 NA 7.203670 11.813415 10.579569 7.452349 8.971713 9.601419 9.426572 9.420893 6.259704 8.525598 9.304514 7.381508 -1.454427 5.415823 7.008533 10.884752 9.368029 9.827388 9.158327 12.520321 3.452345 11.518608 9.676029 10.111036 10.325178 13.223013 8.942063 10.165678 9.224058 NA 8.912032 3.189319 10.349186 7.403439 10.387416 9.387809 6.788632 12.932062 10.411578 10.077327 12.228892 10.257985 9.263135 NA TCGA-E9-A1R7 64 0 NA 1467 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 11.291363 10.988449 11.484970 10.763973 9.072409 9.695829 10.924069 9.684153 8.850645 13.608991 11.487624 10.548715 2.952520 12.955468 5.107805 7.577902 4.515460 8.803706 11.708323 13.435608 4.300446 13.797266 2.580556 8.556488 12.718000 7.453095 NA 8.708626 9.553114 1.952520 7.107803 7.729107 -1.506763 4.470374 9.711657 10.665208 9.712262 9.099499 10.885143 11.752543 1.663026 11.619475 13.920832 9.714276 10.900892 10.932405 12.699268 5.136950 5.000888 9.704982 10.463918 NA 10.819804 10.636796 3.300446 3.622380 11.036850 12.157541 10.632325 11.260864 13.174551 8.994931 11.366538 10.730486 11.654698 10.814740 5.876797 13.447335 9.458156 NA 9.699497 9.979426 1.666211 3.815022 9.662392 10.818399 10.051514 10.872472 7.277728 4.702547 11.398104 9.673002 10.320039 9.212482 -0.5805800 0.4837200 1.9801000 0.0211830 0.0031910 0.0155870 0.3565900 0.5114100 -0.0612860 -0.5890200 -0.5850000 0.5484100 0.0058309 -0.5826900 -0.5609700 -0.0078863 0.0465590 -0.0065050 -0.0065050 0.0090312 0.0239870 -0.0757450 -0.5824500 0.5410100 0.5410100 -0.0069195 -0.5753600 -0.5753600 3.6569000 -0.5784200 -0.5805800 -0.0134020 -0.5838200 0.0150280 0.0155870 0.0280600 0.0000000 -0.0690640 -0.6277900 0.5115900 0.2634100 -0.2557600 -0.5890200 -0.5829400 -0.5829400 -0.2706900 -0.2875000 -0.5826900 -0.5843800 0.0258120 -0.6048700 -0.5898100 -0.5568700 -0.0065050 -0.0065050 -0.0065050 0.0090312 -0.5808800 -0.0757450 -0.5529600 -0.5824500 0.5410100 -0.0151910 0.4938900 -0.5753600 -0.6202600 0.2579300 0.0185230 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 0.000 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 0.000 6.91094608 11.32103154 4.93603483 8.70132795 2.66302576 9.98444552 -1.50676258 NA 7.83960693 5.13695011 -1.50676258 7.48052769 1.81500152 10.82232919 9.88433707 1.07806326 7.94430445 9.91988230 4.04767798 9.38942592 10.26919332 7.31646075 9.09857299 0.07806326 9.01567485 9.35495568 1.30047520 4.16551806 11.08695138 3.81502202 11.51528786 11.05938536 7.40298645 10.78195954 6.65296540 8.15308938 2.88541818 -0.50696758 NA 8.17959415 9.69644146 7.87030368 10.81220106 4.75988020 9.51616864 6.71709512 9.56656555 6.07805685 9.99194269 -1.50676258 12.02739633 1.66302576 3.24798826 9.76428212 5.22766792 4.30044591 9.32914378 9.01567485 9.04959946 NA 13.50090915 2.19351945 9.67362426 NA 8.33701437 4.53748866 8.98294140 9.93500014 14.233550 6.906721 9.127905 12.955468 10.492036 11.844309 13.435608 13.891370 9.542261 11.082276 12.473590 8.772704 9.704982 9.645378 NA 8.646645 13.438309 10.6807548 6.4703742 8.4789354 9.3291438 9.8980806 10.2237207 3.4930965 8.7563625 11.4876237 5.4238303 -1.5067626 6.3818371 7.9874090 10.0156750 11.0368503 7.0780558 8.0648462 12.4277058 5.3634585 11.3773040 9.7122620 9.7504812 8.9728738 14.0431488 8.8451369 10.4022364 9.6927658 1.0780633 8.1996238 4.7410193 10.8198038 6.1795946 9.5591826 11.0368503 8.0283686 12.8650062 9.5230708 9.6673949 12.0914950 10.1333384 9.9642606 -0.5069676 TCGA-E9-A1RA 48 0 NA 1369 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 1 4 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.774378e-07 10.79967495 9.88116292 11.71512662 9.01519201 7.74293927 8.55887450 9.97053116 8.85866021 10.33422914 12.78252088 11.14713546 10.45334431 5.27076813 12.64877226 4.33947949 10.06929925 7.74610648 8.15400744 10.37571847 12.70529476 3.23514496 13.87733144 7.31409558 9.34684345 10.49817875 6.70763246 0.49814873 8.93973964 10.82872217 3.30553283 8.46203800 7.02174066 -0.08681377 3.08314527 9.82310925 10.19456678 9.70437920 11.22183969 9.98333724 11.67227218 3.55706693 10.99968424 14.90190092 8.25564660 9.95006986 11.22297677 10.78858164 4.55707306 1.91322453 9.01124822 11.32842984 NA 11.44215866 4.37264570 6.47545945 5.06296356 10.02630723 12.17001463 10.43971548 12.74640282 12.53458133 7.22155522 11.29313605 10.70390686 10.54348332 11.26360295 5.40506996 12.46396302 11.29448876 2.23514496 10.57855214 9.41106815 4.04661329 4.52792734 11.16824482 9.99270103 10.19398705 9.93766336 1.23511432 10.08751774 12.69672609 11.33317643 10.15936303 9.25640190 -0.04793600 0.48320000 0.48320000 0.02721600 0.02721600 -0.24095000 -0.00022497 -0.24885000 -0.24885000 0.21868000 0.21868000 0.21868000 0.00791750 0.00791750 -0.05374600 -0.05374600 -0.05374600 0.01908300 0.01908300 -0.27139000 0.01310700 0.20081000 -0.26420000 -0.26420000 -0.26420000 0.15965000 0.15965000 0.15965000 0.24295000 -0.04793600 -0.04793600 -0.22859000 0.02721600 -0.24095000 -0.24095000 0.02525000 0.02525000 -0.24885000 -0.24885000 -0.24885000 0.28628000 0.28193000 0.21868000 -0.04698900 -0.04698900 -0.04698900 -0.04698900 0.00791750 0.00791750 -0.05374600 -0.05374600 -0.05374600 -0.05374600 0.01908300 0.00000000 0.00000000 -0.24229000 0.01310700 0.20081000 -0.27882000 -0.26420000 -0.26420000 0.23365000 0.15965000 0.15965000 0.24295000 -0.26131000 -0.27715000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 0.000 8.81106155 13.48087528 8.82160882 9.44849154 4.72056851 10.10242311 4.00067610 NA 8.96306484 8.36648702 -1.08681377 7.33106831 3.55706693 9.82909558 9.67143952 -0.08681377 7.86450066 9.78742920 10.79967495 9.55165213 9.33722494 8.12266961 10.66140909 2.08314527 9.30123347 9.47259337 8.01124850 NA 10.22836585 2.72056304 13.52395274 11.91339232 7.86450066 9.26525966 8.18701202 9.42793023 3.37264570 1.49819980 0.91318623 8.55526783 8.57321204 9.05914839 9.80575902 4.40506656 8.44675993 7.82010683 9.72378789 6.58564161 8.90615463 NA 9.51776937 2.72056304 3.91321495 10.37409703 7.48682537 5.25306649 8.72218046 7.17060411 5.94663964 1.49819980 14.24906015 1.49819980 10.47402672 -1.08681377 8.37674055 4.33947949 8.14683593 8.62230006 13.569261 6.296920 8.458181 12.648772 9.877557 11.054685 12.705295 12.275023 8.984678 10.716944 13.795859 10.934196 9.011248 9.508474 4.000676 6.771198 11.722582 11.13872496 7.62746166 9.15995684 9.04249934 8.07308756 10.64134082 6.80195921 8.69785095 11.14713546 6.01124739 0.49814873 7.33528137 7.56917586 11.82872221 10.27186742 8.84616921 8.94801528 12.14503741 5.83207985 12.07424575 9.70437920 10.49253221 9.83877060 10.93489026 10.41405813 10.62057532 9.26636304 NA 9.69544459 6.14203556 11.44215866 7.25751231 10.31454914 10.02630723 7.55346111 14.54686427 10.01519187 9.95213522 12.50917299 11.09561058 9.86012246 -0.08681377 TCGA-E9-A1RB 40 1 976 633 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 5 NA NA 1 2 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.895554e-07 3.121176e-07 10.37423888 8.82143375 12.14394258 9.15146945 8.86876639 8.90523205 9.22041219 10.05174513 9.81603132 12.31978018 11.39626729 10.51887107 1.05741561 10.97811667 2.22730980 9.54523170 4.56518892 8.34394962 10.06301616 12.73846532 1.05741561 13.13958229 4.46678371 9.19052103 11.44163577 4.51682202 0.05741561 8.74126338 11.96765961 1.05741561 6.20204936 7.82392064 NA 1.86473092 9.63009181 10.91731464 9.59023466 10.15113936 9.05174513 11.20443757 2.86475073 10.88135589 14.12053391 7.49599649 8.95976668 10.95088282 10.34192661 4.30532124 -0.94258439 9.27716533 12.22355474 -1.94286170 11.04181012 5.28621212 5.99402978 5.58877459 8.05174513 12.21860228 9.93544251 11.63741462 12.63835681 7.31948607 11.00740072 10.54178914 10.71493338 11.47563961 4.85180900 12.52531557 8.39612823 -0.35771432 10.48627523 10.52703348 2.52140257 5.19694140 11.31581046 10.06336704 10.37875610 10.19470306 10.17535942 7.84692513 12.22551532 11.58816373 10.59606561 9.36288341 0.8623500 1.0655000 1.0830000 0.2361200 0.3698600 0.4481600 1.1510000 -0.4613100 -0.4229800 1.8190000 0.9959200 1.0646000 0.2962100 -0.1177000 0.2788400 0.2788400 0.2788400 0.4059400 0.4059400 -0.3452700 0.3004200 -0.1072800 -0.4958000 -0.4655700 0.0642250 0.0093098 -0.1227200 -0.1227200 0.3201200 0.0997240 -0.2202200 -0.4352800 0.2361200 -0.5159900 -0.4183800 -0.4350700 -0.4171800 -0.4613100 -0.4229800 -0.4229800 0.1296800 0.2229900 0.1828300 -0.4559700 -0.4559700 -0.4559700 0.6235100 -0.9846300 0.1716600 0.2085500 0.2788400 0.2788400 0.2551100 0.4059400 0.4059400 0.3510400 -1.1804000 -0.4201400 -0.0932710 -0.5525700 -0.4958000 -0.4655700 -0.0611520 -0.5257300 -0.1227200 0.3201200 -0.4189300 0.1887400 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.199 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.065 1.065 -0.392 0.000 0.000 0.000 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.199 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.065 1.065 -0.392 0.000 0.000 0.000 7.6922026 12.5681558 7.2397856 8.6526493 3.6423550 10.0328815 -0.9425844 -1.9428617 8.8013844 7.5809535 0.6423781 7.7156031 7.4258982 10.5211715 9.3525866 2.8647507 3.9153679 10.0741999 7.7048498 9.4987796 9.1067705 7.2717105 10.3005657 2.3793160 10.3919442 9.0382452 6.0630153 NA 10.4606701 1.0574156 13.5692678 12.8995456 6.3927828 9.0644189 8.8452943 9.6753183 4.8122774 2.7578340 -0.9425844 4.4667837 8.5412074 8.2680629 8.7430164 1.2273098 7.2581184 7.5065401 9.7895591 5.3702759 9.5819334 0.6423781 10.8615227 3.5492502 2.8647507 10.6784591 8.1646742 2.3793160 8.7595643 6.9881291 3.1017845 3.1866749 14.1144103 -0.3577143 10.2465985 NA 9.2886128 3.1017845 7.6004236 7.5789923 12.160188 8.397242 9.157397 10.978117 9.658234 12.003201 12.738465 11.996144 9.375935 10.908945 12.977512 11.741592 9.277165 8.686748 2.812272 7.867963 11.163464 11.60861929 7.28621027 8.79040715 9.45506620 9.72274982 10.92160101 5.44109500 6.79885928 11.39626729 9.05739178 0.05741561 6.30531941 9.20661173 11.16836424 10.90033121 8.41164106 8.99697083 11.75750623 3.58095346 12.58781079 9.59023466 10.24659846 10.30324146 10.51220506 9.44379311 11.41631752 9.31654651 -0.94258439 9.56351567 3.51682202 11.04181012 9.12751257 11.07237978 8.05174513 7.48784405 14.00616953 10.97140301 10.83608484 12.38571597 10.47603491 10.15080919 0.86473092 TCGA-E9-A1RC 56 0 NA 1224 breast stage iiic t4b n3 m0 female 2007 NA no mixed histology (please specify) 10 white not hispanic or latino NA NA 3 2 NA NA 1 1 4 4 1 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 4.161568e-07 10.8874835 10.0363099 11.6355130 10.2593836 8.7500557 9.4773487 9.7121653 8.7274410 9.1132718 14.2699273 11.0215831 11.1881767 5.6032139 12.4772859 4.3104346 9.7628796 7.3081761 8.7001713 10.9199806 12.9987265 5.4803588 13.9812657 5.4803588 9.5167338 11.6382096 8.8886163 2.9885029 10.0898235 11.8034873 3.4147715 8.0812613 7.0839016 -2.0115880 5.8526905 10.3917828 10.9313854 10.2919997 9.8650213 10.0986614 11.3045030 0.5734715 11.5954878 14.3784213 8.2074068 8.6142133 11.5132909 11.5488372 4.7566871 2.6889412 9.4510066 11.6019485 NA 10.7554473 2.8464933 4.3460563 5.1074452 7.9295519 11.9833881 11.4121455 12.9524841 13.0728145 8.0108721 11.0101784 10.6333250 11.4189569 11.1437970 5.4642370 11.4610683 10.1653008 -2.0115880 10.3765217 9.9073677 4.6036560 3.6889412 11.0698214 10.1596812 10.2167219 10.6155822 NA 5.6819917 12.6308382 9.3222189 10.6050532 9.0699878 0.740430 1.864000 1.838700 0.406790 0.386180 0.354630 0.440710 -0.063838 -0.090556 1.419100 1.419100 1.411000 -0.104210 -0.104210 -0.090493 -0.090493 -0.090493 0.399610 0.418480 -0.076945 0.843760 0.468440 -0.004936 -0.004936 -0.004936 -0.493290 0.012795 0.012795 0.998620 -0.574860 -0.624840 -0.094064 0.417140 0.531510 0.311130 -0.614030 -0.145410 -0.063838 -0.090556 -0.065045 0.400250 -0.614510 1.419100 -0.123320 -0.123320 -0.123320 0.029747 -0.104210 -0.104210 -0.090493 -0.090493 -0.090493 -0.099088 0.399610 0.418480 0.474210 -1.144900 0.439460 -0.620730 -0.072140 0.000000 -0.004936 -0.089831 -0.493290 0.012795 0.979180 -0.070804 -0.568130 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 -0.575 -0.435 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.366 0.366 1.355 1.355 -0.123 -0.123 0.190 0.190 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 -0.575 -0.435 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.366 0.366 1.355 1.355 -0.123 -0.123 0.190 0.190 7.74004854 13.39597131 6.48834951 9.98462467 2.78759963 10.47885383 NA NA 8.54213382 8.08785210 3.57347148 7.24824734 4.87114874 9.97683402 9.22032560 4.25528922 6.34605625 9.72406034 8.68894403 10.12869513 9.89636768 7.91183177 10.12613593 1.79585005 11.07712701 8.75254657 3.07596041 -0.42662547 9.77232117 0.79585005 12.33238406 11.28111360 7.47433382 10.48884836 7.64314044 9.07729268 5.79586044 0.31045646 1.57347148 10.26025918 7.70618103 8.35591925 7.93248407 2.31042738 8.98033783 7.29228482 10.33667927 7.31268514 9.31493393 -1.01158797 11.10436084 2.84649332 3.07596041 10.20067845 6.19366137 -1.01158797 7.94560653 6.66798435 4.29228850 1.15840166 13.73748335 -0.01144255 10.62942711 -0.42662547 7.51010506 6.21732379 8.13570929 8.32165982 11.664113 7.296844 8.590275 12.477286 9.952845 11.595141 12.998726 12.048525 8.891550 11.382833 13.524509 10.263174 9.451007 9.284847 -1.011588 7.310433 12.502725 11.0545935 8.1203613 8.6750050 10.1058228 9.4173880 10.4914207 4.1177865 8.8046880 11.0215831 7.3013874 1.8953802 5.3635426 8.6121483 12.0339228 10.7990760 9.5373264 8.2304874 11.9992073 0.9884847 12.7308143 10.2919997 10.4402306 9.3624570 11.8770574 9.7450606 10.8130654 9.1832612 4.0328943 9.0509013 0.3104565 10.7554473 8.3294672 10.1646776 7.9295519 7.8665705 13.3619473 9.6210452 10.2736175 13.1081750 9.9955316 9.8703831 -0.4266255 TCGA-E9-A1RD 67 0 NA 34 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 11.2643815 10.3787789 11.9220715 9.5723296 8.5462547 9.8798517 10.5757385 9.6235777 8.7556811 13.8351914 10.2358848 10.7288114 1.9483392 12.6140175 3.5008658 8.9669902 6.7795276 8.5008674 9.9282754 13.5873956 2.1272040 13.9984697 6.4885182 9.7621074 10.7702066 7.7979922 -0.9584766 10.6240834 11.7473920 1.2113861 7.4823046 6.5728169 NA 4.8994173 10.3787789 10.2505844 11.3830935 10.9436223 10.2732569 11.6532674 5.2213435 11.3268379 13.5176756 9.5141315 9.2780240 11.9936309 11.4091234 4.4843766 7.1021321 9.0871952 12.2803628 -0.3735141 11.4530791 3.9956292 5.7487940 3.0414357 10.5637720 12.3036040 10.9430568 11.9838585 13.0329132 7.4487036 11.3000017 11.0420537 11.3943067 11.1322097 5.0526637 11.8793592 9.1636165 -1.9584766 10.1075249 9.0967181 3.9780766 5.6852926 10.6345934 9.7595404 9.8959145 9.4310669 2.2893623 10.4463111 12.6776638 11.4396450 10.7479317 9.2690516 -0.0033606 0.9017400 0.9071400 0.0046777 0.0046777 -0.0123000 0.4602400 -0.0019399 -0.0019399 0.0013868 0.0013868 -0.0059091 0.0066653 0.0058467 -0.0013858 -0.0013858 -0.0013858 0.0000000 0.0000000 -0.4665300 0.0081959 -0.0033243 -0.0074720 -0.0074720 -0.0074720 0.3820400 0.3820400 0.3820400 0.0267950 0.0024969 -0.0033606 -0.0037395 0.0046777 -0.0123000 -0.0105080 0.4602400 0.4602400 -0.0019399 -0.0019399 -0.0019399 -0.0029091 -0.0029091 0.0013868 0.0033299 0.0033299 0.0033299 0.0033299 0.0058467 0.0130740 -0.0013858 -0.0013858 -0.0013858 -0.0013858 0.0000000 0.0000000 0.0000000 -0.4665300 0.0081959 -0.0033243 -0.4776500 -0.0074720 -0.0074720 0.4725500 0.3820400 0.3820400 0.0244880 0.4287300 -0.4704600 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.46455147 11.88358958 1.50085303 9.55713549 2.36336735 10.53554124 -0.37351414 -1.95847664 7.91025836 8.78962852 -1.95847664 6.93567779 1.62639241 10.45638512 9.31697816 0.62639241 7.17329237 9.56499771 11.22181106 10.35573573 9.78323973 8.60367827 10.98907264 2.89940768 9.04986434 9.25636180 6.34521716 -1.95847664 9.90600878 3.99562923 12.41559218 12.10651518 8.34064371 10.28133255 10.54053415 9.41647518 4.45082854 -0.95847664 0.84879818 3.04143575 8.53228657 7.96921382 10.73644641 3.25088580 8.70284867 5.54128251 10.24906011 6.20130647 9.58784782 NA 12.15769841 2.79632779 7.65430449 9.92806588 6.55263529 3.36336735 9.20256759 7.21885477 6.89630455 NA 13.52977796 0.04138318 10.08138291 NA 8.72968599 5.86161549 7.97069436 8.57184212 13.0618080 5.8029867 8.9445645 12.6140175 9.9180907 11.3814248 13.5873956 12.5381022 9.2312603 10.7029911 13.2165954 8.3790577 9.0871952 7.5960242 0.3633393 7.6942806 11.5978220 10.811067 7.676247 9.073482 8.988342 8.715628 10.148323 6.255756 8.391270 10.235885 6.134192 2.899408 3.713861 7.167934 10.210108 10.179387 8.703739 7.817869 12.325898 4.727937 11.950718 11.383094 10.808379 9.783324 11.323800 9.461922 10.965135 9.438575 -1.958477 9.474244 4.685290 11.453079 6.896305 10.532795 10.563772 7.221344 13.585282 10.542526 10.591461 12.938478 9.734923 9.996722 2.128887 TCGA-E9-A1RE 74 0 NA 1419 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 2.427581e-07 10.8703162 10.1452172 11.5109222 9.6090343 9.0072678 8.2629226 10.0444068 9.5241291 8.2806246 13.5594881 10.9010130 10.7593658 1.3925372 13.5196208 3.7144873 8.1459602 5.8075945 9.4705605 10.1948947 13.6658031 4.8075971 13.3686048 0.2226809 9.2377621 12.5795662 8.3167105 -0.1924802 6.1235007 10.2307113 1.9230731 9.2184000 6.4800211 1.0299829 3.6489026 9.9156842 10.4562526 9.8038334 9.7412860 9.6462741 11.5559280 1.0299829 11.6043110 13.8724504 10.1443326 9.9415895 11.5438564 11.8091209 3.7772198 5.0039934 8.9230725 10.4835524 0.5445843 10.3650591 9.1927389 5.0681248 3.5801817 10.5708078 11.8582376 9.8290382 11.0663577 12.3585025 7.2560558 10.9076006 10.4480362 10.8578975 10.6512548 5.0428107 10.6588239 11.8926252 NA 10.1250080 10.5660962 3.2740081 3.7772198 10.6820645 10.6488976 10.4451260 11.5254146 2.2226191 8.1459602 11.4443710 9.5697005 9.8999121 8.3634628 0.0113370 0.0113370 0.0155870 0.0094491 -0.5469300 1.1236000 -0.0105080 0.4628000 -0.5213300 1.4101000 3.4885000 3.5983000 0.0180590 0.0180590 0.4980500 0.5633000 -0.5292000 0.0228650 -0.0044312 -0.0023021 0.4918200 -0.5213800 0.5615200 0.5615200 0.5615200 0.0850760 0.0349590 0.0732580 1.0354000 -0.4889000 0.0113370 -0.4779700 0.0127950 0.5510700 1.3769000 -0.0128510 -0.0128510 0.0220240 -0.5567400 -0.0027707 -0.5461300 0.0030522 -0.5277700 -1.2929000 -0.5135200 0.0375900 0.0435820 0.0180590 0.0255310 0.4980500 0.5633000 -0.5338800 0.5218800 0.0228650 -0.5053600 0.0308730 -0.0040162 0.5269300 -0.4965300 -0.4987500 -0.4836500 0.5615200 0.0000000 0.0850760 0.0732580 -0.4792300 0.5206600 -0.4835500 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.527 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 1.776 -1.102 0.000 0.000 0.000 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.527 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 1.776 -1.102 0.000 0.000 0.000 7.7403022 12.7676577 9.2974434 8.9858454 2.9775181 10.8304255 0.5445843 NA 8.2683928 8.1607422 NA 7.8182818 0.2226809 10.4932202 9.2940953 4.9775226 7.0775015 11.0481880 9.0875928 11.2004494 9.9678325 8.5434336 10.5694236 1.0299829 10.4127662 9.1905796 8.4124576 3.2226346 10.7393179 4.1533676 11.4748548 11.5616478 6.8519901 10.1219898 7.3259206 9.7224788 7.5823821 2.8076022 -0.1924802 0.2226809 9.3081053 9.4375590 10.4143090 3.8664926 7.7043719 7.2833292 10.3037834 7.6020114 9.7184878 NA 9.1075665 2.3925647 3.4705629 9.6012313 4.7178464 5.0555211 7.8428525 9.2470799 6.4025414 -1.7774427 13.3967003 -0.7774427 10.6259113 NA 8.8941739 4.3723810 8.1724595 8.9299921 13.669951 4.936878 9.993710 13.519621 9.964942 10.791302 13.665803 12.655305 8.715037 10.870316 12.130744 11.111566 8.923073 7.728444 1.222619 7.508035 11.626178 10.813220 5.880845 8.991644 9.568038 9.790114 10.951740 5.526413 9.410604 10.901013 4.909135 -1.777443 3.837338 7.760395 13.012014 9.577433 9.805669 10.169174 11.759609 6.055523 12.963698 9.803833 10.923723 10.436345 12.452879 9.376185 10.677960 9.264976 NA 8.675430 6.135523 10.365059 7.333769 10.440536 10.570808 7.068123 13.491467 10.173553 9.967467 11.709594 10.061049 10.204913 2.222619 TCGA-E9-A1RF 68 0 NA 200 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 1 NA NA 1 2 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.570457e-06 6.146745e-07 9.87232351 9.46183220 11.81798692 9.68222810 9.47434721 9.40049246 9.44002074 9.92949292 10.52100518 13.15294905 10.15829145 10.78710829 0.44921799 13.44095093 3.25655782 9.23874125 5.60907824 7.99417182 8.27893028 12.57736314 NA 14.62261154 0.77112495 10.04708791 11.04539744 8.98933574 2.53667462 10.56845685 10.94256281 2.25655782 6.92088279 7.07856394 -1.55088768 4.57849195 9.44850311 10.46078433 8.97374931 10.35872581 9.31339371 10.56294986 0.03421572 10.27098170 15.16104937 8.97272051 10.30485484 10.09531631 10.49735389 4.35610154 4.69713438 8.53268709 10.54196478 NA 10.50889012 5.94905395 6.61411498 5.07856287 10.45131941 12.26348970 10.69654187 11.91923098 12.66466483 8.59386578 10.75697773 10.10342748 10.99610214 10.61254289 5.03417169 11.52050240 10.47642260 -1.55088768 10.60781733 8.93503684 3.77546148 5.66837729 9.46740788 10.45728606 10.75982046 9.85806805 0.77112495 6.58363341 12.68686577 11.35346594 10.40049235 9.40413101 -0.0058140 0.5208300 0.8952700 0.3530000 -0.1179600 0.0269350 -0.0066432 0.1288900 3.6569000 -0.3725600 0.3605100 -0.0092666 -0.0024938 -0.3666700 0.2991500 0.1010300 -0.3582900 -0.0138150 0.3562600 0.6950300 1.1167000 3.1505000 -0.3386000 0.1665500 1.5985000 -0.0736160 -0.0171160 0.3280800 0.9942600 -0.4153100 -0.0058140 -0.0801410 -0.0199610 0.0269350 -0.3616800 -0.0066432 -0.0066432 0.1288900 -0.4831300 -0.3730200 0.4505400 -0.3790900 -0.7672300 -0.3626100 -0.3626100 0.3660800 -0.0045695 -0.3666700 -0.3592000 -0.3698600 0.1010300 -0.7491600 -0.3365300 -0.0138150 0.4089400 0.4265400 0.4362900 0.2409200 -0.3807800 0.0454240 -0.6849700 -0.3614700 -0.3471000 -0.0736160 -0.0993410 0.9810700 -0.0149160 -0.4055000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 0.000 0.000 0.000 0.000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 0.000 0.000 0.000 0.000 9.42146948 13.78169883 6.88799919 9.56099537 3.53667462 10.86574131 2.03418049 -1.55088768 8.15138040 8.76435710 NA 7.99976216 2.84153038 10.37809605 9.01145007 3.03416288 7.42648785 9.60085846 9.79516724 8.72649509 9.40852145 8.41643401 10.74612387 2.25655782 7.49633132 10.29273620 1.61913125 -1.55088768 11.92481443 3.84152032 12.59688959 12.41562300 7.98253731 9.55315100 9.45903626 9.61725293 4.87547046 3.53667462 0.03421572 6.29469794 8.19067461 9.33185074 8.49769459 3.87547537 9.62127882 6.19739954 10.28051491 5.59895469 10.23384253 NA 10.17797857 3.09306996 4.49360251 9.09841903 7.17105867 4.80675711 9.22646301 8.93905552 7.93100693 -0.55088768 13.90151326 1.25658801 10.81744131 NA 6.95700218 3.73461208 8.06207637 9.53865824 12.092681 6.368072 8.811151 13.440951 10.990546 10.851953 12.577363 14.714896 8.541965 10.665044 13.517524 10.009063 8.532687 9.664134 -1.550888 8.444975 11.150514 10.84928655 7.94106052 8.99417210 9.06023252 7.58363416 10.54517165 7.18729961 7.47987482 10.15829145 6.84152535 0.03421572 6.44920809 7.62582937 10.67019053 10.51159118 8.47573100 8.92291349 9.33032153 6.36807162 11.94368952 8.97374931 10.64550245 10.20909582 10.91706792 9.11631927 10.52234505 8.21075900 5.57849195 8.22583789 6.17712848 10.50889012 6.89629123 11.21428651 10.45131941 7.44920726 14.35348947 10.52902570 9.47780440 12.24939980 10.40957169 9.86018890 1.61913125 TCGA-E9-A1RG 62 0 NA 647 breast stage iiia t1c n2 m0 female 2011 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 8.3167522 8.4675000 10.6859859 6.7566644 9.4945544 9.0896475 9.2753931 9.3891314 10.3245716 13.9759982 10.8350317 10.3395701 -0.1137230 12.9642001 -1.1137230 9.8571245 8.3980523 7.9816963 7.7160224 12.2575316 NA 13.5437296 6.0461702 10.3882909 10.5165667 9.1682296 4.8635817 11.8639372 10.9034559 0.4712395 7.5902030 6.4936297 NA 0.4712395 8.8721414 10.5832670 8.2871791 9.1969124 8.2350277 9.3579746 -0.1137230 10.8452147 14.6115326 7.0638685 9.7442805 9.1090944 9.5156561 3.0562193 -1.1137230 7.6577893 9.3209278 0.4712395 10.5776068 4.3781509 4.3125635 5.9197214 8.8933267 11.8753391 9.9830147 10.8225694 12.1776141 10.4137765 9.8898174 9.5648996 10.3911184 10.1997494 2.8862965 11.1917913 7.2914406 2.8862965 11.0711749 8.7535781 1.2082051 4.5010123 7.8491955 8.1991825 10.2498868 8.6871993 2.4712655 7.0411181 11.2501605 10.3741395 9.9245327 9.1495688 0.262160 0.502030 0.517510 0.100160 0.106580 0.065513 0.099288 -0.371780 -0.863180 0.085799 -0.381560 0.542940 -0.375610 0.086956 -0.364990 0.082909 0.082909 0.519090 0.557970 -0.388280 0.111990 -0.369520 -0.362040 0.050392 0.066229 -0.838250 0.031718 -0.075812 1.262500 -0.373020 -0.361240 0.113890 -0.378890 0.051132 0.000000 0.102490 0.108180 -0.371780 -0.863180 0.371010 0.084354 -0.395080 0.068167 -0.383690 -0.383690 -0.383690 -0.371320 0.095653 0.085943 -0.876500 0.082909 -0.367930 0.080456 0.519090 -0.368950 -0.390630 -0.364760 0.077430 -0.365780 -0.397860 -0.885870 0.082765 -0.365900 -0.584410 -0.368160 1.232600 -0.848510 -0.388170 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 -0.132 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 -0.132 8.318841 14.107245 7.667659 9.971108 2.608762 10.892275 1.693677 -1.113723 9.565780 8.088423 NA 6.530155 3.409866 9.667659 8.719190 6.654484 7.843402 8.819990 5.627767 12.500779 9.797789 6.448543 10.637844 1.886316 8.727077 9.985647 5.278617 1.208205 11.070555 -0.113723 13.148615 12.586631 7.066209 8.603976 8.444720 9.975088 3.208221 1.693677 -0.113723 8.609107 10.082287 10.929327 8.642856 1.208205 8.624476 9.817037 10.062473 4.973763 10.348802 -1.113723 10.375144 2.056237 3.208221 9.758128 7.054521 4.278617 9.543618 7.583267 7.000042 -1.113723 14.176930 -0.113723 11.398299 NA 7.036046 10.800311 8.659439 8.964450 13.329482 7.041118 9.272162 12.964200 8.849196 11.448065 12.257532 11.113615 8.598465 10.003943 12.325611 11.074888 7.657789 9.502848 3.278624 7.134227 11.258348 10.401014 6.793190 8.535556 8.185507 8.666019 9.918531 7.572800 9.430298 10.835032 7.802179 1.693677 5.731789 8.340661 10.082902 9.562257 9.687676 9.811112 6.744281 5.171703 11.872147 8.287179 11.119620 10.558725 11.097275 9.807397 9.981037 6.579787 NA 9.064815 5.394096 10.577607 5.781118 10.202134 8.893327 6.700401 13.797083 10.481091 9.638680 11.829730 10.178621 8.528351 2.208236 TCGA-E9-A1RH 63 0 NA 1417 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 1.907385e-06 5.548757e-07 10.74506872 9.95349122 11.19318522 11.13638284 9.22526794 10.07003317 8.85118372 10.40374735 10.72466178 14.19755148 9.92317652 10.76729295 1.66530180 11.83999339 2.73571712 10.35181790 4.45191662 9.98046693 9.68156856 10.78840407 NA 7.51080768 9.99668222 8.97456631 10.86793097 7.05763439 -0.07157282 11.80576370 11.23099066 1.34340782 8.88931899 9.39391810 -1.65653532 4.40947919 10.26931454 10.43449396 7.16675661 11.46249246 9.82266419 12.03349634 9.89028374 9.37474587 15.73473352 7.30139102 7.90372221 12.01835383 12.48725070 4.22603064 6.02989013 10.47909856 11.89293326 NA 11.22622329 3.73570629 5.85118434 5.80282135 11.20680120 11.73584081 9.61017572 12.26513721 13.07661644 7.66080172 10.52516264 10.07979116 12.09869411 11.18436380 5.50325968 12.91211729 9.36991268 NA 9.60195534 9.89076586 1.15075462 3.59132037 9.77017807 10.36124155 10.54214117 10.47492473 0.34335097 6.58179411 12.81194963 12.59161332 10.23403349 8.46362695 0.1238800 0.1238800 0.1238800 0.5846600 0.7848500 -0.3087400 0.5581500 0.0230050 -0.1940000 -0.2198500 -0.3110800 1.8373000 0.2717400 2.0334000 -0.2258800 -0.0247980 -0.0247980 -0.2934300 0.0000000 -0.0347680 -0.2941400 -0.2918900 0.1796600 0.1796600 0.1796600 0.7480300 -0.1274600 0.6806800 2.8276000 -0.2814400 0.1238800 -0.0761110 -0.0545550 -0.0346310 0.4463000 -0.3116700 -0.3116700 0.0230050 -0.1940000 -0.1940000 0.0810330 0.0810330 -0.5969200 -0.2992200 -0.1720800 -0.1720800 -0.1720800 -0.2819200 -0.2999200 -0.5894100 -0.0247980 -0.0247980 -0.0247980 -0.2934300 0.0000000 0.0000000 -0.0347680 0.0179630 -0.2918900 -0.0068745 -0.2765500 0.1796600 -0.5690700 -0.3032200 -0.2210800 -0.2771500 0.2494900 0.0047190 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 0.000 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 0.000 7.7506567 13.0422024 2.4308473 8.5319779 2.7507351 9.8327355 -1.6565353 2.5133139 8.4202049 9.0704588 NA 9.5871583 8.3836788 11.3648898 10.0683293 3.2013673 7.1016123 8.4893214 5.4202062 9.1683479 9.1672024 9.2547813 9.7884042 0.9283514 4.9283514 10.7316757 0.6653018 1.8028136 10.9377138 1.6653018 12.1900549 11.7707021 7.1951379 9.0576347 7.7738421 10.1920121 8.5479603 0.6653018 -0.6565353 -1.6565353 8.7378520 9.1107461 8.1181764 2.4308473 8.2223902 7.3033908 9.9122954 5.8669500 10.5826894 0.6653018 11.5170664 3.7009390 1.5133391 9.4624405 3.9648514 6.2975858 7.7162543 6.0915814 6.9908471 8.7801007 13.3341137 -1.6565353 10.2332733 -1.6565353 9.8840017 2.9283514 8.4571313 9.1731119 11.60254401 7.90563190 8.36019745 11.83999339 10.32317166 11.07024595 10.78840407 9.52454152 9.03338721 10.54306160 12.80991183 9.78425842 10.47909856 8.60313263 -0.07157282 9.23441342 13.10254922 11.100362 5.354618 10.045995 8.587753 9.774364 9.791717 3.769655 7.294674 9.923177 7.769654 7.098276 4.943302 8.880637 14.348049 10.322814 8.729252 7.128024 10.254407 6.735706 9.853817 7.166757 9.828212 10.076828 11.089694 9.162770 10.515192 9.955336 8.307730 8.719829 6.863025 11.226223 8.529504 9.045562 11.206801 8.299039 14.363523 10.032950 10.976839 13.305969 9.477174 9.691011 2.735717 TCGA-E9-A1RI 43 0 NA 1449 breast stage iiia t1c n2 m0 female 2011 NA yes mixed histology (please specify) 5 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 2.774378e-07 10.90830067 10.40895435 11.73435792 9.24626057 9.22471585 8.66434986 9.99993110 10.03350973 9.13269122 13.66327755 11.72958553 10.65171959 0.68481874 13.48491303 2.75516533 9.37268205 7.20205720 8.87361759 9.86618240 13.03516834 NA 13.59710960 1.68477386 8.97018385 10.61965189 7.65976975 -1.63710936 7.55020577 9.32068098 3.68478508 6.89812852 7.83249512 -1.63710936 4.40725077 10.09034853 11.26993192 9.35791395 11.48211886 10.13434302 11.56803581 -0.05214686 10.75678013 14.48608578 8.15879598 9.68083138 11.05895169 12.09777475 4.73789223 4.14420956 9.44033683 11.88076889 -0.63710936 11.38365986 7.55514664 7.25767164 4.47137608 10.71792922 11.86319747 10.68928300 12.90261814 13.27255911 7.62729603 11.11335117 10.79942710 11.23167606 11.01860782 5.24549566 12.07752832 11.43966910 -0.63710936 10.22122314 9.20677458 3.12201002 5.64825547 10.29432977 10.52713193 10.72561924 10.48762100 4.61078273 7.75945814 13.10663604 12.78103554 9.97295553 9.13928658 0.060222 0.060222 0.060222 -0.045228 -0.029311 0.017404 0.032563 0.031859 -0.517260 0.062295 0.062295 0.071248 0.027076 0.027076 -0.108670 -0.108670 -0.108670 0.019503 0.075344 -0.049369 0.022585 -0.013815 -0.546730 0.586150 0.730000 -0.086253 0.427850 0.434790 0.052810 -0.055705 0.060222 -0.179920 -0.045228 0.017404 0.017404 0.032563 0.032563 0.031859 -0.515370 -0.540580 -0.083695 -0.024388 0.062295 0.000000 0.000000 0.000000 0.000000 0.027076 0.027076 -0.062629 -0.108670 -0.108670 -0.108670 0.075344 0.075344 0.086088 -0.049369 0.022585 -0.113720 -0.517640 -0.546730 0.586150 -0.193620 -0.539360 0.434790 0.052810 -0.011060 -0.574270 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.428 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.428 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.01300772 13.10400444 8.82535571 9.47203117 1.27548389 10.18860727 -1.63710936 -0.05214686 8.02641167 8.14748835 1.17018146 9.07624001 1.94781575 10.37652514 9.22005686 2.26975132 9.13516801 9.52713193 10.25387773 11.24434986 9.70055901 8.28766621 10.42624861 3.17021351 8.45561080 9.55576267 3.75517601 NA 10.40588081 2.53279071 12.53840304 12.11282763 8.56620135 9.77383483 9.86269934 9.78544397 4.09077723 0.68481874 1.53276578 2.26975132 8.03173869 7.59647305 10.23244731 3.94781575 5.68026527 5.65747423 9.86070539 5.75517067 10.03129539 NA 10.44766184 3.11774490 4.85470884 9.77004688 6.41063112 5.79748256 8.64014080 7.43699464 7.16375331 NA 13.52039780 0.94785314 9.87953838 -0.63710936 9.06502616 5.06329153 8.47007070 8.66320619 13.1335613 5.5723076 9.4282697 13.4849130 10.5994656 10.2059894 13.0351683 12.7081201 9.5997766 10.9867350 13.4212681 9.8927720 9.4403368 9.1782368 -0.6371094 8.2020572 11.3508280 10.82918495 7.19257590 9.31777686 9.15808149 9.10010092 10.30630235 6.54276260 7.58202227 11.72958553 6.48697496 5.50240380 5.50240380 6.16135766 11.67005431 10.07064398 8.76373290 7.78491812 11.64970001 6.26974384 12.98054478 9.35791395 10.69349036 9.85570805 10.62582918 8.95811099 10.64652064 9.27499424 -0.05214686 9.44678494 6.67119287 11.38365986 9.47854738 10.31340935 10.71792922 7.04584810 13.82963099 10.42422467 10.65258419 13.17257140 9.45561059 9.70936715 2.94781575 TCGA-E9-A226 45 1 1048 1038 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 3 NA NA 1 1 3 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 3.467973e-07 9.806118 10.192249 11.314510 9.574110 7.849371 9.391777 9.024023 10.146742 9.312303 13.823136 10.598158 10.483863 NA 11.657740 3.019524 8.399419 5.430948 8.662223 9.820680 13.243185 3.545585 13.011667 6.306403 8.654115 10.879739 5.604484 NA 7.935998 9.359371 2.545598 8.200624 8.115446 NA 3.801935 9.952622 11.397513 9.841232 11.527316 10.659622 11.664531 11.068063 10.838934 14.560192 7.306225 9.013196 11.117553 10.928334 2.375679 1.960623 10.846578 10.804025 1.545573 11.749618 6.208554 5.575337 2.375679 10.567958 12.003769 10.155795 12.244584 13.096764 8.507522 11.354554 11.024486 11.877129 10.792463 4.130552 14.065336 10.061728 1.183010 9.909968 8.238303 3.329856 5.875510 8.734316 10.726604 9.891858 9.757749 5.441756 8.606886 12.872519 11.449137 9.952622 9.818090 -0.1071000 -0.1071000 1.3804000 -0.5823500 2.1744000 -0.1864700 0.0374550 0.0599000 0.0285350 -0.5306100 -0.5306100 0.0762790 -0.1031600 -0.1031600 -0.0316610 -0.0316610 -0.0232920 0.0548030 0.0548030 0.0495400 0.6371900 -0.2797700 0.9501000 -0.5261400 0.1018300 -0.1229100 -0.1229100 -0.1229100 1.9386000 -0.4994200 -0.1071000 0.0000000 -0.5823500 0.0114000 -0.1864700 0.0374550 0.0374550 0.0599000 0.0285350 0.0702430 0.1849500 0.1882800 -0.7967000 -0.0047834 -0.0047834 -0.0047834 0.2077900 -0.1031600 -0.1031600 -0.0339500 -0.0316610 -0.0232920 -0.0232920 0.0548030 0.0548030 0.0548030 0.0495400 -0.3648800 -0.2797700 -0.5318500 -0.5381500 -0.5261400 -0.0366430 -0.1229100 -0.1229100 0.3662500 -0.4570400 0.0794470 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 0.000 8.8061178 13.9459952 8.3093558 9.0516222 NA 10.6953372 NA NA 8.1651990 8.2506466 NA 9.1548675 NA 10.4400711 8.5468420 NA 5.3414485 9.8128970 8.9350421 8.0708932 9.9991991 7.7892930 10.1082565 NA 7.7701280 9.2006238 4.5851188 NA 10.0555850 1.9606229 11.1984351 11.7195448 8.0249213 10.5905913 10.2644084 8.5814582 5.2085563 -0.6243767 NA 5.9755775 6.9977169 6.7155145 11.8543083 2.8992336 6.8144569 4.2825584 9.4090882 6.6656841 9.4186924 NA 10.0190704 2.0761144 3.5455854 10.2521169 4.9818116 1.8351156 8.8391896 8.1553844 6.0267160 NA 12.6696396 NA 9.2967623 NA 7.2429435 3.4631254 7.8972658 8.0726327 13.605836 5.183022 8.974648 11.657740 10.081298 11.073284 13.243185 11.516655 8.940767 10.845307 13.119553 9.293783 10.846578 9.735415 3.767983 7.635408 12.285746 11.28387004 7.40633258 9.63481994 9.42483288 8.03030131 10.82391308 4.89922881 8.23364604 10.59815814 6.20221396 4.07610583 6.59483366 7.03426965 11.96531627 10.23946416 6.61883916 7.20221396 12.57748272 3.76798313 12.58299904 9.84123159 10.09419793 9.33928372 11.69109774 8.62951254 11.05909842 9.29303728 6.04100199 8.62789278 4.56548751 11.74961777 9.41937603 10.04011242 10.56795788 7.32110913 12.55207204 8.99221383 10.35222919 12.16570810 10.11079805 10.39073163 -0.03934002 TCGA-E9-A227 42 0 NA 975 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 10.3350764 9.6046357 11.5767582 8.8548254 8.7239530 9.3614596 9.9267963 9.8489488 9.0980123 12.6152771 10.3618034 10.4024932 2.0277910 12.2079842 2.2342254 9.6974908 6.5022733 8.4148112 9.2023298 13.0058935 3.1346974 13.4302673 5.9855596 9.9863720 10.0934631 5.4358719 NA 11.7033381 10.3877065 0.3273425 7.7409761 7.4014897 NA 4.9420593 9.3846633 10.0839046 10.0510093 9.4456406 9.8311741 10.5920842 13.7487887 10.3853401 14.5375441 8.2468821 9.4475862 11.4196100 10.8792969 4.8030823 5.9997746 8.5294723 11.7128064 NA 11.4322747 5.7282280 6.7324904 4.5561657 10.3046283 11.8662648 10.5190246 12.5832621 12.6783566 7.8953044 10.8785760 10.5082738 10.8020683 10.5334470 4.6311276 11.6215383 11.3871998 NA 10.1144347 9.2357409 2.5767882 6.3771966 10.5627644 10.0561192 10.1383216 9.3846633 2.2342254 8.5282470 12.2180876 12.1097324 9.8518900 9.3648954 0.00379050 0.53116000 0.54541000 -0.00360110 -0.00360110 -0.00235530 0.00000000 -0.00207840 -0.00207840 0.00319100 0.00319100 0.00092241 0.00423000 0.00875280 0.00583090 0.00583090 0.00583090 0.00527490 -0.00083160 -0.00097017 0.00332990 0.00583090 0.00345250 0.00345250 0.00819590 0.00861350 0.00861350 0.00861350 0.01042400 0.00598770 0.00379050 -0.00152430 -0.00360110 -0.00235530 -0.00235530 0.00000000 0.00000000 -0.00207840 -0.00207840 -0.00207840 -0.00097017 0.01167900 0.00319100 0.00360760 0.00360760 0.00360760 0.00360760 0.00875280 0.00875280 0.00583090 0.00583090 0.00583090 0.00583090 -0.55276000 -0.00083160 -0.00083160 -0.00097017 0.00332990 0.00583090 -0.56455000 0.00345250 0.00345250 0.00652620 0.00861350 0.00861350 0.01042400 -0.00666700 0.01474900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0424523 12.5757949 5.2580854 9.5447002 4.5171749 9.7908727 3.0822427 NA 8.6826993 8.1946274 NA 7.8266362 2.4972802 10.7295610 8.9864525 0.3273425 9.9988894 9.3357769 11.4123228 10.7250230 9.8428610 7.3357771 11.1332937 3.5367989 8.5705225 10.2379911 9.0068284 NA 10.4289958 3.0822427 13.2316066 12.5414398 8.5282470 10.6464559 8.2417334 9.3110546 3.2342407 2.4972802 NA 4.1087084 8.6925771 11.1897920 10.3476339 5.1977121 7.9942290 5.6311305 10.6630178 4.8819386 9.5190245 NA 11.7924045 2.8509194 9.5489355 9.8510916 6.9388162 4.6127535 9.5633626 8.4592054 9.1054256 0.6492935 14.0425060 1.3273425 10.2217872 NA 8.0120971 5.8192007 8.2387405 9.5239504 13.0777141 5.1977121 9.1379200 12.2079842 10.5548771 10.9632932 13.0058935 13.1061442 9.3249584 10.4154740 13.5537982 9.8025752 8.5294723 10.1266300 -0.6725426 7.7515146 10.7687364 10.7687364 4.7367402 8.9748069 8.6447608 8.2506760 9.6179548 7.0654409 7.8291855 10.3618034 5.6582658 0.9123433 8.3046283 6.2406559 10.3003282 10.5257934 7.8291855 9.6520915 11.0227942 6.4821658 10.9468806 10.0510093 10.6297017 9.9193381 10.5678415 9.1892108 10.5050793 8.9207396 NA 9.6868069 6.3552542 11.4322747 7.1977131 10.8063707 10.3046283 7.1665518 14.3029053 10.6610628 10.6092784 13.0831748 9.7175174 9.8291855 3.9123145 TCGA-E9-A228 58 0 NA 1285 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.81477e-07 10.4588954 10.0592314 11.4403181 9.6646963 8.5830474 7.7650852 10.2460694 9.9638085 9.6784582 14.8597381 10.2264266 11.3554519 1.7897293 14.9027655 4.1820328 9.8139312 3.0121038 8.5356692 8.4190715 13.8684218 1.7283124 14.4715208 -0.2102290 9.4891140 11.0520057 5.4715387 0.7896875 6.8083786 10.0285178 5.5085332 6.9529450 6.0502427 4.8486079 4.9462209 10.1063737 10.1413905 9.7229139 9.7336950 10.0352677 11.3262861 1.2047668 11.4879857 14.1949008 8.6433364 9.6120203 10.9533647 10.7167523 5.1116448 7.0627337 9.5199022 9.7125471 -1.7953584 10.6721034 4.8194638 5.7746079 5.6476973 11.2429857 12.1258496 9.9301187 11.6277371 14.6956348 7.1325306 11.1404701 10.7413592 10.5765292 10.3008088 5.2131801 11.7892454 11.9056257 1.3746778 9.9237134 9.2319675 2.8520588 5.5710761 10.6641841 10.4820399 10.2173771 10.5359494 0.7896875 8.9487454 11.0747319 10.2922154 9.8281768 8.6183804 0.00719410 0.00719410 0.00083195 0.00152550 0.00652620 0.00763920 0.00000000 0.00903120 -0.74360000 3.65690000 -0.73038000 0.00805670 0.00332990 0.01363200 -0.73275000 3.65690000 3.65690000 -0.00304750 -0.00207840 0.02946600 0.00138680 0.00013863 -0.76072000 3.65690000 2.72670000 -0.03612900 -0.03612900 -0.03612900 -0.00429290 -0.74829000 0.00719410 -0.73766000 -0.75571000 -0.34779000 0.00763920 0.00770490 0.01104300 0.00903120 -0.00567570 -0.01021200 -0.00320700 -0.00409720 -0.77606000 -0.00769030 -0.00193990 -0.00193990 -0.00415460 0.01363200 0.00956620 -0.75141000 -0.01050800 -0.00152430 -0.00152430 -0.00304750 -0.00207840 -0.00207840 0.00194180 0.00138680 -0.01078400 0.02426800 -0.76072000 -0.04156700 0.01810300 -0.03612900 -0.03612900 -0.00429290 -0.73714000 -0.79093000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.742 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.742 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 0.000 7.4668473 11.5629916 4.5797896 8.7554992 3.5266823 11.4525318 2.4526745 NA 8.5601035 7.8964959 NA 6.9678649 2.9051968 10.1582215 9.2326586 4.7593423 7.3080404 10.2388637 9.1183901 10.2798974 9.4690015 7.7574213 10.8940954 2.9051968 8.2061607 9.7554993 1.3746778 1.3746778 11.4047316 3.2491419 13.1297969 11.7013567 7.6098938 11.1898829 7.1618544 9.7892454 5.0121083 5.0627348 -0.7953584 3.9861105 8.9129743 9.3321021 10.1343809 2.2047668 5.9317870 6.4142066 10.1726993 6.7631739 9.9309707 -1.7953584 9.1905944 2.5970782 5.1589469 9.5184348 5.4457333 -1.7953584 8.7477845 8.7468169 4.9051920 NA 13.9838563 0.5266698 11.1265935 NA 8.4323686 6.0502427 8.1820323 9.1920166 15.945214 7.893003 9.116145 14.902765 10.333391 10.375617 13.868422 11.530620 11.870923 10.756220 12.098718 10.600287 9.519902 7.367144 4.062735 9.902155 11.206161 11.0153242 8.2367982 8.8468042 9.4425600 10.1813166 11.0618782 4.3746778 9.7026044 10.2264266 6.5623050 -1.7953584 4.5623035 9.0501093 11.4986552 9.4407668 8.6804861 8.6895756 11.6756656 3.4142032 11.5612815 9.7229139 10.2312760 9.8065234 12.4429333 9.6825108 10.8053624 9.6804859 2.5266698 9.1332784 0.5266698 10.6721034 6.0185340 11.3698166 11.2429857 7.3027842 14.2211038 9.6677660 10.2912206 11.6900787 10.3684022 9.8245139 1.9051968 TCGA-E9-A229 37 0 NA 1148 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.774378e-07 10.7561574 10.3392844 11.8916376 9.7843129 8.1564452 9.2525484 9.9243489 10.2528734 9.4565265 14.0554149 10.5688743 11.0679613 6.2505959 12.6896436 4.1592255 9.5350636 5.9634024 8.6085298 9.5667841 12.5927596 0.7218538 13.1875959 7.3389779 8.9327722 10.7988551 7.5009892 -0.8630212 11.7219344 9.4112326 2.4587757 8.3105314 7.9522380 NA 4.4944092 10.2661374 10.9681617 9.8673246 11.5502179 8.1702776 11.5244680 5.4767057 10.9880179 14.4774522 8.8973748 9.6342074 11.2274631 11.6343321 5.1702776 4.1592255 9.6701842 11.7880183 -1.8630212 11.2645264 6.2661381 7.4429161 5.3752584 10.7595927 12.1600024 10.7241632 12.5751265 13.1573136 8.5962859 11.2014288 10.9351399 11.5632502 11.1212729 5.1255395 12.2489681 10.7732525 NA 10.3782419 9.2979862 4.2268630 6.5714827 10.2447254 10.4352035 10.2368597 10.0572074 2.7807090 8.8207263 12.4837837 11.2904065 9.8536738 9.2486423 0.0901410 0.0901410 0.9222900 0.0182430 0.0044411 0.0013868 0.0670880 0.0115390 -0.5721900 0.0000000 0.0000000 0.0137720 -0.0067813 -0.0030475 0.0047190 0.0047190 0.0047190 -0.5635600 -0.0056616 -0.0034627 0.0030522 0.0065262 -0.5654500 0.0109820 0.0109820 -0.0140900 -0.0140900 -0.0140900 1.4373000 -0.4188200 0.0901410 0.0218840 -0.5692200 0.0013868 -0.0080244 0.0011981 0.0011981 0.0087181 -0.5721900 -0.5819600 -0.0153290 -0.0153290 -0.5807800 0.0044411 0.0044411 0.0027745 0.0331040 -0.0030475 0.0070826 0.0047190 0.0047190 -0.5664400 0.0162860 -0.5715000 0.0015255 0.0094491 -0.0059522 0.0030522 0.0065262 0.0140510 -0.5654500 0.0109820 0.0087528 -0.0140900 -0.0140900 0.0094491 -0.0545550 -0.5604700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.000 9.7288443 14.2897730 9.7460332 10.5665227 2.8917497 10.4683313 1.1368476 0.1368476 8.4176251 8.2878712 -0.2782336 8.0464627 1.3067872 10.5823866 9.1654512 3.6287036 9.1112690 9.7865598 7.1536625 9.3674755 9.8512417 8.5173155 10.2243173 4.4587823 8.3608563 9.5291719 3.1812457 -0.8630212 10.6461347 3.0437469 11.9402793 12.0058699 8.7879061 9.6938394 11.8657316 9.1011954 4.7067074 0.1368476 0.1368476 7.0705450 8.4463307 9.0756989 9.6337082 4.4767057 7.0453075 5.7589054 9.6003789 6.0910503 9.4744764 -1.8630212 10.7290779 3.8092807 4.4222599 9.6805629 5.8133041 5.1255395 9.0675917 8.3883368 7.3847820 0.1368476 13.3359133 0.7218538 10.8743131 NA 8.4001237 4.6446466 8.0164378 8.7816122 13.098259 6.636700 8.522717 12.689644 10.379433 10.838594 12.592760 12.629208 9.055718 10.517045 12.934161 9.261622 9.670184 9.714283 1.596267 7.608530 12.365523 11.347526 7.903384 9.228290 9.080102 8.982345 10.518787 7.438350 9.159916 10.568874 7.082298 6.440635 6.164760 8.431567 11.386116 10.495506 7.832083 9.042993 12.484337 6.991723 11.690920 9.867325 10.569657 9.774385 10.934111 9.792832 10.653047 9.083761 NA 9.436246 6.660417 11.264526 9.364470 10.466370 10.759593 7.947522 13.441063 9.993280 9.909994 12.599996 10.881898 10.519479 2.529171 TCGA-E9-A22A 74 0 NA 1189 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 6 NA NA 1 2 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.080784e-07 9.6586749 9.2534327 10.9557485 8.4445081 8.6597277 9.0371864 8.8960332 10.5871663 10.9538187 13.6638323 10.6536642 10.8194443 -0.7612131 11.1950909 4.4285377 9.7255498 6.1929102 9.2980591 8.6363893 11.8103489 1.4086575 14.0325212 -1.7612131 9.4254604 10.6876053 8.0556984 2.2387257 12.5095276 10.1664926 1.4086575 7.1635269 8.0331306 -1.7612131 4.6816573 9.4645247 10.2800316 9.6245771 10.3168655 8.7012170 10.3673536 3.1929043 9.0540980 15.1428319 6.6847234 9.4890132 10.7576137 11.6812695 4.2831069 6.6180933 8.9784954 10.7225305 NA 11.4081700 7.8293016 6.6094019 5.0716039 10.7040260 11.4475587 9.9473675 11.9496287 12.4221175 8.7807792 11.3068212 10.3168922 10.8182664 10.1965423 3.5241138 11.6010696 9.9973544 -1.7612131 10.5353442 9.7976137 2.5656947 6.0266164 11.0988317 9.8839229 9.9806030 10.6382597 5.2831106 9.1907279 12.4228152 11.2748883 9.6465135 9.3360885 -0.38929000 0.39031000 0.39031000 0.00917050 -0.00235530 -0.00024461 -0.00678130 -0.00027724 -0.40296000 3.65690000 -0.39196000 1.45890000 0.00805670 0.02718800 0.00360760 0.00221930 0.00221930 0.00388540 0.00388540 0.00277450 -0.39419000 0.00819590 -0.39040000 -0.37335000 1.84260000 0.02062300 0.02062300 -0.37279000 -0.00110870 -0.37763000 -0.38929000 0.00000000 0.34339000 0.00499690 0.00249690 -0.40008000 -0.40086000 -0.00027724 -0.40296000 -0.40296000 0.00166420 0.00166420 -0.40385000 -0.39975000 -0.39975000 -0.01257800 0.02572400 0.00638710 0.00638710 0.00360760 0.00221930 0.00221930 0.00221930 0.00388540 0.38469000 -0.01009400 -0.00456950 -0.39419000 0.00819590 0.00763920 -0.39040000 -0.37335000 0.00083195 0.02062300 -0.37279000 -0.00110870 -0.42560000 -0.42139000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 0.000 9.2499421 14.1629473 7.9952708 9.5857824 2.3729242 10.6406609 0.5606171 0.2386646 8.3406904 9.5072567 3.8825746 9.6411939 0.2386646 11.4528820 8.9120238 3.7305639 7.7661916 9.6496959 6.9902583 9.1221216 9.3282777 5.9801807 11.5657059 3.4481741 7.1152320 9.8744329 1.9391513 NA 11.6852811 3.4866372 12.8764717 12.0974728 8.6868310 9.4681344 11.0331306 9.7913838 3.3261778 1.9391513 -1.7612131 3.7933029 8.7484897 9.4334715 9.5453460 3.4866372 7.3052346 6.9040505 12.1127355 5.9666358 9.4884208 NA 10.9289310 4.1929122 3.8825746 9.7721661 7.1441014 4.8236780 9.6950692 8.6597277 8.1958166 0.5606171 13.5842932 1.6981296 11.1289790 NA 7.9040505 5.8009568 8.2610827 9.2059411 13.628498 6.210258 8.748490 11.195091 10.212412 11.112159 11.810349 10.487532 9.131258 10.629690 13.024525 9.824616 8.978495 8.244339 -1.761213 8.595167 11.230059 11.0331306 6.2159950 8.4854554 9.5763366 7.6691671 10.2313309 7.4747289 8.1136963 10.6536642 7.8497397 2.6310344 5.3261778 8.6598643 11.4934481 10.7839205 10.0351599 9.6565672 9.5060866 6.6691671 10.4254232 9.6245771 10.4836731 9.8789596 10.2156367 9.5333354 10.4678340 9.0959181 -0.7612131 9.4689093 6.3155300 11.4081700 9.3334521 10.5244435 10.7040260 6.6524693 13.1510427 10.4777165 10.6033966 11.9336167 10.5648633 8.9910955 2.3261634 TCGA-E9-A22B 71 0 NA 1167 breast stage ia t1c n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 4 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 4.161568e-07 10.19655037 9.87550563 11.03443322 8.91756393 9.03201459 9.39849147 9.22377922 10.16237874 10.32064082 14.69279480 10.27525539 10.71754920 2.26029670 12.59591876 3.30761796 9.33498183 4.72845388 8.68321080 6.63881672 12.52732584 0.67536431 13.45119975 0.93839872 9.75495012 10.44716218 8.75001922 NA 8.55667695 9.88577049 2.74573213 7.76068203 7.62487732 2.16075888 5.41950518 9.24671614 10.25503565 9.71096653 10.45965026 9.69215098 10.14783034 -0.06160128 11.11205415 14.71479290 6.75061856 9.44683208 10.75135651 11.05168511 4.69326391 6.34776840 8.85922603 10.32387994 NA 10.59211781 6.00446544 5.05385422 4.05385856 10.49552159 12.16719570 9.89934423 11.33408961 12.78719552 7.99185060 11.17817439 10.33462503 10.66061528 10.64975717 4.17741555 11.58628507 11.22262274 -0.64656378 10.50918148 9.20281953 1.53291536 5.72845388 10.95727264 10.51423137 10.50601624 10.53301264 4.54323603 9.13641264 11.80604185 11.03618969 10.00625945 8.87206751 0.1333200 0.1259400 0.1227000 0.0186630 0.0186630 0.0384890 0.0533790 -0.0055671 -0.0055671 3.6569000 -0.6037400 1.0481000 0.1082100 0.7429000 -0.2065700 -0.2065700 -0.2065700 -0.0042929 -0.0042929 0.0351000 -0.0128510 -0.0542860 -0.4374500 0.2163700 0.7906500 0.9334500 0.3004300 0.3004300 0.2166800 0.1502400 -0.5395600 -0.0034627 0.0186630 0.0471260 0.0384890 0.0533790 0.0533790 -0.0055671 -0.0055671 0.0024969 0.1025500 -0.2672100 -0.6231200 -0.6007100 -0.6007100 -0.6007100 -0.5989600 -0.5336800 0.8247000 -0.2089200 -0.2065700 -0.5453200 -0.5453200 -0.0042929 0.0116790 0.0116790 0.0351000 -0.6071900 -0.0542860 0.1253700 -0.4744800 0.2163700 0.0000000 -0.6284600 0.3004300 0.2166800 0.0382060 0.1259400 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 0.418 1.041 -0.601 -0.601 0.000 0.000 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 0.418 1.041 -0.601 -0.601 0.000 0.000 8.1973356 13.0213022 5.6843307 9.6560535 1.3534362 11.0921401 0.3534362 0.9383987 7.5894287 8.4114063 -0.6465638 8.3245555 2.9972743 11.5831346 9.6775951 0.6753643 7.9533275 9.5031617 6.1543138 10.5012554 9.5406428 6.9232704 11.8696070 2.0538412 8.6341852 9.5683407 3.9972743 -0.6465638 11.0806968 1.8128268 12.5933113 12.4890436 8.8621997 10.9793516 9.5882319 10.3385449 4.8128473 3.3534080 -0.6465638 0.9383987 7.6108027 10.3778617 9.4936053 6.0187499 8.6802596 7.4302301 10.6730866 6.4929651 10.1137186 -1.6465638 9.5220866 2.3534080 4.7109662 9.3814173 7.0174710 1.3534362 9.5277161 9.0372864 4.8925756 0.6753643 14.0960397 -0.6465638 11.0796326 NA 8.7901259 5.4302317 8.7521582 8.9918503 13.326470 5.710966 9.169598 12.595919 10.654625 10.692986 12.527326 11.461776 8.913747 10.390961 12.624659 10.843263 8.859226 7.403263 NA 7.648035 11.815405 10.2110068 5.7109662 9.2183743 9.1567384 8.2929938 9.4690760 5.9308438 9.0080507 10.2752554 7.2113958 1.5233612 4.6571941 6.6587927 11.2589895 9.2565432 7.8452674 9.4801191 11.6444413 3.7109662 11.7103162 9.7109665 10.3930191 9.7628054 11.5523199 9.2907884 10.0017721 8.8412545 -0.6465638 8.2383178 3.6013400 10.5921178 8.0434123 9.9879170 10.4955216 7.0013406 13.5294707 11.0642210 10.2459573 12.6164636 9.4032630 8.6155094 1.1607911 TCGA-E9-A22D 38 0 NA 1248 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 4 NA NA 1 4 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 10.3360615 8.7533990 11.5947013 8.3122722 9.2513295 9.5506229 9.4851845 9.6250449 8.9481970 12.6771969 11.6524545 10.4642754 -1.9556758 15.1546354 1.3662523 9.4867405 5.0100995 8.6636182 10.7351862 13.1703340 NA 13.9163648 2.2142492 9.5587136 10.3096372 6.1211315 0.3662523 10.7325656 10.1525129 -0.9556758 8.6872693 6.0043171 -1.9556758 4.9750523 10.0646008 9.8330335 9.5210613 8.9897589 9.4489247 10.5938592 -0.9556758 9.2304295 14.0897336 7.5256704 10.2803294 10.6266925 11.4102275 4.2142414 4.4193569 9.1645530 10.2010304 NA 10.9674570 8.2254673 8.6663671 6.0443154 9.5570556 11.9682926 10.6578745 12.0260609 12.7731392 6.6065577 10.6960396 10.2901650 10.8664877 10.6852380 3.9022955 11.6023771 11.9741284 -1.9556758 10.2800303 9.2173677 1.6340821 6.3662435 10.2698239 9.3297174 10.2634838 9.4768572 2.0443242 5.4537052 12.1238833 11.6581047 9.7456217 9.6608641 -0.0873140 1.6030000 0.2338000 0.0051359 0.3068100 1.9245000 0.2372100 0.4067700 -0.0914200 -0.6875200 -0.2584200 0.2074800 0.2254500 -0.1038100 -0.0415670 3.6569000 -0.3009800 -0.0953840 0.2327200 -0.6966700 0.8071400 -0.1119500 -0.3344500 3.0940000 2.5309000 -0.2353300 0.1143300 0.1143300 3.6569000 -0.0873140 -0.0873140 0.0022193 0.0051359 0.1843400 -0.0568820 -0.1294000 -0.1294000 0.0584870 -0.0914200 -0.0872140 0.0140510 0.0237060 -0.6875200 1.7774000 -0.0221950 -0.0221950 -0.0221950 -0.1038100 -0.1038100 0.1440100 -0.0415670 -0.4243100 -0.2730800 -0.0953840 0.2327200 0.2327200 -0.6774700 0.6509300 -0.1119500 -0.3944100 -0.4205700 -0.2985200 0.3391800 -0.1528500 0.1143300 -0.2857200 0.1042400 -0.7209500 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.148 0.000 0.000 0.000 0.000 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.148 0.000 0.000 0.000 0.000 10.3081712 12.0979018 3.8772044 8.6132215 3.9985115 10.6548787 4.1317788 NA 9.0499397 8.1117497 NA 6.1423481 -1.9556758 11.0602529 9.1819468 3.9750523 8.4547665 9.0527438 9.0948441 10.4328707 9.5650567 6.9360984 9.9414043 3.2537624 9.8472354 9.7334396 1.8516791 -0.3707133 10.6523390 1.3662523 12.4582736 12.4029664 8.0400825 9.8029549 10.1629319 9.8297678 2.8516791 2.9985205 -1.9556758 2.4366416 8.9504541 9.5346647 10.6883968 2.9023052 4.3022679 7.2341401 10.1294557 5.1211315 9.8120858 NA 9.6184356 3.2142336 5.8058677 9.5674213 5.3462691 7.2242246 8.9757915 9.5644428 9.5624766 -0.9556758 13.6390480 3.0887013 10.4236936 -1.9556758 8.0625152 4.4537085 8.0499400 8.3017029 15.2688989 6.5912097 9.4805063 15.1546354 9.8211595 10.6020183 13.1703340 12.0883678 9.1600093 10.6332641 13.8972104 9.4425245 9.1645530 8.5950620 0.3662523 9.5083504 11.4495897 10.5909685 6.2488858 8.7176243 9.5296414 8.8604988 9.8548427 8.9421608 9.0287338 11.6524545 6.5281306 0.3662523 7.3819374 8.5583488 9.8395432 11.0485357 8.8108441 9.3458115 8.9750526 8.3017029 10.9253221 9.5210613 11.7206029 9.7167406 10.7681895 9.2963893 10.2631812 8.0215952 NA 9.4619464 8.5220734 10.9674570 5.8580954 10.9260009 9.5570556 7.5989041 13.5092757 10.9448047 10.3069973 12.4520477 10.0856322 9.2409172 3.2537624 TCGA-E9-A22E 56 0 NA 1269 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 4 5 NA NA 1 2 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.976745e-06 4.855162e-07 10.2142518 9.5462387 10.7556725 8.0684494 8.7957241 9.0694551 8.0804717 10.5007378 10.6280385 12.5274236 10.2115211 10.4378778 5.3639805 10.9431928 1.9045419 10.2699957 4.0420489 8.5192580 9.9124163 11.6244503 -0.4173477 12.5640089 3.1061808 9.9291338 9.7260032 7.1825324 -1.4173477 11.8195311 10.1950278 1.5826042 8.2282785 8.1954884 NA 4.9576593 8.8633909 9.9845661 10.0573399 9.0532789 9.3130903 10.1086302 5.4895108 10.3782539 15.3135147 6.6380116 9.6766978 10.9352152 10.6591016 4.8863989 5.5598986 9.2839264 11.0049477 -1.4173477 11.4900741 8.4075788 6.9920104 5.4529841 10.0400009 11.7640829 10.7712089 12.2617702 12.3345824 9.5455161 11.2379271 10.2192446 10.8829726 10.4973788 3.2830624 12.1854349 9.3574071 NA 10.7269596 8.9781541 2.4515145 4.8680200 10.6098349 10.2101540 9.5741418 9.5221992 6.0904152 6.6647687 12.9920773 11.7541096 9.3190220 9.6379025 -0.398860 0.319000 0.941600 0.468270 0.915230 -0.425060 0.025110 -0.099472 0.049038 0.182830 -0.337330 1.188300 -0.156430 -0.407150 -0.086386 -0.086386 -0.086386 -0.049154 -0.102200 -0.393300 0.468440 -0.100340 -0.397860 -0.397860 0.589730 0.117410 0.117410 0.117410 0.863140 -0.044415 -0.398860 -0.184330 -0.384810 -0.119520 -0.141030 -0.420790 -0.420570 -0.220980 0.049038 -0.413440 0.227270 -0.192240 -0.555270 -0.402220 -0.409700 0.219600 0.596920 -0.405300 -0.358740 -0.402630 -0.086386 -0.371890 -0.372450 -0.049154 -0.412120 -0.416080 -0.396440 -0.408820 -0.100340 -0.351450 -0.093271 -0.397860 -0.274640 0.117410 0.117410 0.862750 -0.096572 -0.395350 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.136 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 1.188 -0.171 0.220 0.000 0.000 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.136 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 1.188 -0.171 0.220 0.000 0.000 9.7829057 14.9969419 5.5938467 10.5309873 1.7525345 10.0265995 -1.4173477 -0.4173477 7.9576593 10.1996283 -1.4173477 9.3771333 4.2264777 10.7383869 8.9022922 1.3899522 9.6187937 8.9684825 8.4591369 10.4977525 8.9518357 6.8955026 12.2260253 2.0420489 7.0904142 10.0036329 0.5826523 1.7525345 11.1706319 0.5826523 13.0796610 12.4553911 9.1964096 10.3499769 9.7431218 9.6534119 5.6379029 1.5826042 0.1676148 5.7822932 8.5641872 10.3058543 10.1825329 4.7525452 7.0504299 5.6700840 10.2443981 6.6753770 9.4560642 NA 11.1066719 3.3375113 4.6487070 9.7720245 6.0348210 3.6700812 10.1066719 9.2882524 6.5074331 -0.4173477 14.0000440 0.5826523 10.6560922 NA 7.2656150 5.4652627 8.6379025 9.0379472 12.297189 5.310540 8.096348 10.943193 10.364390 11.239268 11.624450 11.231202 9.211066 10.432025 13.152535 8.609144 9.283926 9.510398 -1.417348 7.849406 11.155083 11.0400009 5.6049875 8.6049879 8.3122409 6.7323669 10.3396308 6.4895108 7.6594358 10.2115211 7.6832824 2.0420489 6.5074331 6.7220684 11.9124164 11.1687561 8.7041537 9.1862465 9.6331489 5.8494064 11.3266465 10.0573399 10.9760105 9.7705906 9.8932328 9.6091435 10.4675537 8.5882447 0.1676148 9.5663049 5.9489419 11.4900741 10.6790058 10.2756713 10.0400009 6.9090494 13.8572166 10.3291344 10.6081056 12.1430723 9.9603728 9.6049879 4.1061808 TCGA-E9-A22G 47 0 NA 1239 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.011424e-06 7.282743e-07 9.7442514 8.8903841 11.9567836 8.0846824 8.8569091 7.4797520 9.1246130 10.4302135 11.4132059 12.1672767 12.4563133 10.3701272 3.3148415 11.6061594 2.0152835 8.9899195 6.8026844 8.4607770 10.4115599 6.4947532 NA 9.1181687 7.0152846 8.7935435 11.1127089 5.5627736 1.1222089 7.4696630 12.1959587 -0.6852455 10.5550398 6.4747167 -0.6852455 2.2217224 8.7742764 10.2463210 8.9995933 9.3856366 9.8851749 11.5617338 -0.1002057 11.5712009 13.2656284 8.0207883 9.6008248 10.5863077 9.7012462 4.5816284 NA 9.0579961 12.1059059 NA 9.8006741 3.5243019 4.1974880 3.9587035 7.6254575 12.7224445 9.4991002 10.7063568 12.1130128 5.2921265 11.6134802 11.1138126 10.7799010 10.8199119 3.6349649 11.5791407 9.3489558 -1.6850135 9.4447716 9.5297710 4.8544695 3.3148415 8.5181928 10.9539593 11.2022558 9.8141923 -0.6852455 8.4009810 12.0597837 11.5474156 10.1905941 9.8535187 -0.7362600 0.7107600 1.4851000 0.8211800 0.0472400 0.7879400 0.5799800 0.0207630 -0.7692800 0.0351000 0.0351000 0.1503900 0.1156500 -0.7603800 0.0725400 0.0457080 0.1974000 1.1740000 0.2479300 0.5408300 -0.7495900 -0.5860800 -0.7795600 -0.7795600 0.0428740 0.5629400 1.5588000 -0.7979500 -0.7015400 0.0062481 -0.7362600 -0.7933600 -0.7474200 -0.7759200 -0.7302000 -0.7410700 -0.7482900 0.0207630 0.0538060 -0.7653500 -0.8136700 0.7013900 0.0352420 0.0696690 -0.7669800 0.0291840 -0.0810730 -0.7603800 0.0174040 -0.7494200 0.0457080 -0.6538900 -0.7467900 1.2784000 -0.7147900 0.7954900 -0.7478600 -0.7495900 -0.8141700 -0.6427400 -0.7795600 -0.7795600 0.1468200 -0.1042100 -0.7979500 -0.1704400 -0.0510460 -0.0065050 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.787 -0.787 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.150 0.150 0.000 0.000 -0.239 -0.239 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.787 -0.787 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.150 0.150 0.000 0.000 -0.239 -0.239 6.5484644 11.2894386 2.9586942 8.8979274 1.7989629 12.8868344 2.2217224 2.7071714 9.4266325 8.3741892 5.8922744 8.6985491 5.6094654 10.8778026 10.0118123 1.6367754 2.8384073 12.2980165 6.0962049 8.9073017 8.7690308 7.0797162 10.5224692 -0.5608556 7.3204693 9.9908017 4.7242355 NA 9.4246754 3.5243019 13.2252533 13.9060164 6.7701723 10.4872723 12.3125535 10.3893207 3.9872663 2.6367754 2.1222089 5.9442025 9.2949844 9.8554572 8.6288614 5.8770865 7.5317362 4.4645899 9.9699282 7.2690406 10.4963076 6.6591411 12.3380793 2.4847826 6.7411096 10.8239418 6.0521268 0.3148705 8.5663273 6.4997199 3.8998040 3.5627675 13.9176016 NA 10.6438001 NA 9.6048636 3.5243019 8.5021969 9.0204772 9.286388 11.003532 9.559803 11.606159 11.029520 12.502893 6.494753 10.092922 9.688662 11.566327 13.023929 11.227547 9.057996 9.296412 5.973056 9.110884 10.436054 11.4454153 5.9147582 8.0680613 11.1183705 8.6513513 10.6399084 4.8694322 3.9872663 12.4563133 10.1677644 NA 9.1173610 8.9088988 12.2068183 11.5267330 7.9925645 8.7146566 6.5096008 5.7905792 10.6622003 8.9995933 10.2558924 10.8129460 11.1088544 11.6031341 11.3983241 7.9147576 NA 9.3106189 2.6367754 9.8006741 8.0929220 11.2207958 7.6254575 7.4578454 14.2784634 11.0569436 10.0355166 12.7490169 11.9327713 9.7247660 0.3148705 TCGA-E9-A22H 42 0 NA 1232 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 0 10.91666458 10.10582380 12.32266402 9.85632732 8.33207818 10.24871947 10.45509066 9.70153069 7.48001221 13.91924989 11.18701994 10.85298753 2.81977035 12.41241845 2.71283786 7.82938977 6.67061801 8.45638563 9.86454554 13.38642687 3.14169436 13.89674375 8.28036342 9.60343774 11.31789808 8.17353823 0.33433944 8.63354237 11.01451807 1.01242565 6.57082720 6.26507115 NA 4.47183776 10.39043017 10.66188701 12.42880799 11.56351367 10.34612065 11.91091318 0.01235413 12.13725455 12.88301179 9.14890412 9.63445805 12.20469909 11.48560464 4.59737027 5.48001302 8.99183133 13.10669018 NA 12.11798744 4.43867211 6.33433408 4.16215363 10.19697176 12.23489932 10.74117715 12.37667775 13.24711145 7.81168809 11.08370103 10.79811825 12.16540406 11.32571448 5.39611153 12.24602593 7.82297801 -1.98735982 9.83178701 9.46670562 2.76568325 5.61973579 11.04083039 10.40552858 9.66569921 9.83298413 0.01235413 10.25498500 12.39900976 11.09870839 10.48281098 9.15003792 0.01000600 0.78179000 0.78587000 0.00000000 -0.01381500 -0.01391500 0.02468900 -0.00830050 -0.00830050 0.00000000 0.00000000 0.01433000 0.00477190 0.00986690 0.02160300 0.02160300 0.02160300 0.00541390 -0.00637440 0.05224100 -0.00236210 0.01502800 0.01195800 0.01195800 0.01251600 0.00569190 0.00569190 0.00569190 0.02468900 0.01000600 0.01000600 -0.00235530 0.00000000 -0.00013862 -0.01391500 -0.00108220 -0.00923840 -0.00830050 -0.00830050 -0.00830050 0.00152550 -0.00175400 0.00000000 -0.00298900 -0.00298900 0.01000600 0.01000600 0.00986690 0.03538300 0.02160300 0.02160300 -0.72491000 -0.72491000 0.00541390 0.00239470 0.01600600 -0.65854000 -0.00097017 0.01502800 -0.72039000 0.01195800 0.01195800 0.00353090 0.00110150 0.00569190 0.02468900 -0.00926660 -0.73899000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.99682483 11.83507668 5.16215363 8.96950826 3.59736431 9.89733997 1.81974992 NA 8.07310203 7.18483370 -1.98735982 6.94904461 1.71285987 11.07377746 8.96004307 3.53596584 7.59360700 9.53596817 9.93350330 10.19913958 10.37729329 8.36113450 10.40954612 2.59736431 8.72149024 8.63902808 4.43867211 -1.98735982 9.41701576 3.40472604 11.63102118 12.27457454 7.96660235 9.90570785 11.45522020 9.03269183 4.42179555 0.33433944 1.33433944 5.95491980 8.74796234 7.45327557 10.53988327 2.96659658 8.30107636 4.97819105 10.66860767 6.28386993 9.75766035 NA 11.32017630 2.33433944 6.87968494 9.89343988 6.79146898 3.43866546 9.02851804 7.58794549 8.06633195 NA 13.32819268 0.01235413 9.60533043 -1.98735982 7.75218660 5.87659307 7.89198961 8.57369414 13.829565 7.174798 8.867275 12.412418 10.294145 11.333066 13.386427 13.102850 9.403650 11.372019 13.502536 8.405797 8.991831 8.332078 1.182311 8.022235 11.585935 11.095221 7.697155 9.308175 9.103842 9.824584 10.165626 5.919297 8.302425 11.187020 5.937220 -0.402588 2.819770 7.392997 9.774373 10.315616 10.378182 7.707635 13.325821 5.455350 12.828174 12.428808 10.713279 9.714146 11.276995 8.841336 10.789456 8.991831 -0.402588 8.417761 5.343323 12.117987 6.760599 10.041694 10.196972 7.753873 13.214031 10.780384 9.854364 13.190721 9.794585 9.967693 2.012390 TCGA-E9-A243 52 0 NA 612 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.491228e-06 3.81477e-07 10.8869024 10.3045157 11.3240834 10.2096126 9.3784631 9.8787002 7.8388144 10.7753020 8.2670268 11.7045332 11.2642920 10.6352027 4.9230731 10.5622603 4.6011438 9.4954959 5.8893884 9.2887221 10.0571039 9.5810644 NA 9.2067665 7.2044851 9.0150978 10.0855801 6.9614011 0.2226809 10.7162081 10.6632944 3.2930173 7.6011446 8.5598088 -2.0991235 6.4514518 10.7890675 10.8025145 10.1301244 10.1417942 10.6535035 11.2377691 1.0706641 7.4856675 13.8235679 8.0726820 8.1064980 11.4970111 10.9570038 4.5445596 -2.0991235 9.7450183 11.2255885 NA 11.5018952 7.2427797 9.7714548 6.7586856 10.2889912 12.1061926 10.2310615 11.9209903 13.0433703 5.7955228 11.2655234 10.8178549 11.3794744 10.9698188 5.1486332 12.0232093 8.2338603 -1.0994326 10.0671817 9.9704902 2.9507670 7.2450002 10.3342903 10.5836994 10.4538541 10.7248680 2.6011498 6.2090439 12.5706971 11.9584427 9.7718400 8.9881677 -0.09999900 0.49986000 0.59206000 0.88526000 0.09779100 0.32237000 0.38304000 0.04060900 -0.08545700 0.10257000 0.10257000 0.31386000 0.06350900 0.06350900 0.35561000 -0.01161100 -0.01161100 0.25511000 -0.05347600 -0.05967300 -0.07960900 0.07009900 -0.01986300 -0.01986300 0.33642000 0.36411000 0.20543000 -0.12823000 0.09579800 -0.11744000 -0.09999900 -0.00069303 0.09779100 -0.14875000 0.02230400 -0.21210000 -0.04563500 0.04060900 0.04060900 -0.24192000 0.03582900 0.04457400 0.10257000 0.09391100 0.09391100 -0.23472000 0.07182200 0.06350900 0.06350900 0.35561000 -0.01161100 -0.15594000 -0.15594000 0.25511000 -0.05347600 -0.05347600 -0.05967300 -0.07960900 0.07009900 -0.13368000 -0.01986300 -0.01986300 -0.06437400 -0.07187300 -0.12823000 0.09579800 -0.09868200 0.22792000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.000 0.000 0.500 0.000 0.000 -0.127 0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.000 0.000 0.500 0.000 0.000 -0.127 0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 10.71087469 11.79030381 3.14862504 9.02353287 4.98816659 8.66723362 4.60114381 4.96679497 7.93825168 7.69998672 1.90072193 8.32382084 7.76952713 10.60006036 9.61537970 -2.09912353 10.81378119 10.48566732 9.98783614 9.24333515 9.12090787 7.88369840 9.20105745 3.51540969 7.62351208 9.22375944 1.70805477 NA 9.98152233 3.90070261 12.81045728 12.24375169 8.78487527 10.47245741 10.08650939 9.59723766 5.16749040 2.94510200 -0.09927807 NA 8.95055327 8.71448595 10.02029439 4.72088585 7.87302385 5.68206478 10.58982920 6.55175593 10.26975681 5.31855908 10.79495418 5.36013598 4.75868693 9.43639820 5.59196060 9.68329362 9.25660641 10.31723848 10.12198982 -1.09943263 13.65950056 2.29301727 9.93412782 -2.09912353 8.11380883 3.94510200 9.21924767 8.89788417 11.3031200 8.7524539 9.9000002 10.5622603 10.6997840 11.9840179 9.5810644 10.3565457 9.0536235 11.4747069 13.4346732 10.3913050 9.7450183 7.9230725 0.7080548 8.8373428 10.6245790 10.7884966 4.1295221 9.1210830 8.2305013 7.4572109 9.3653680 8.2438904 6.8664889 11.2642920 8.7024131 -0.5143671 7.4837876 8.5828303 12.1349235 11.2948995 8.0479097 8.1174509 10.2330211 10.2700295 11.5882128 10.1301244 10.4308672 9.0612065 9.9811892 9.6430143 10.4655688 9.0196458 -2.0991235 8.9208584 10.0335258 11.5018952 9.3253961 10.3965598 10.2889912 7.8255173 14.2766097 10.2957033 10.9576811 12.3726975 9.7656647 9.5300614 5.5517559 TCGA-E9-A244 54 0 NA 21 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 4 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.838026e-06 7.282743e-07 10.4145937 8.6551235 11.3440058 8.0794837 9.3775188 7.2988865 9.4487176 10.9340963 11.1183764 13.9604722 11.0562106 10.2928876 0.3860384 12.4058483 3.6713953 8.0584220 6.9859102 7.8597025 8.6656074 7.8164493 -1.6139616 10.8119996 9.2540479 9.4260949 11.2970144 5.9482387 1.3859832 7.5204230 10.2521167 2.3859832 8.1901279 7.2988865 NA 3.3859970 8.1475484 11.0339050 9.6949047 8.4466929 9.9501464 10.2029806 2.4734492 9.0199004 15.7237147 7.6388276 8.9095589 10.8159267 10.5615465 3.3401919 NA 10.3884604 10.9847473 -1.6139616 11.1911362 6.9821870 4.9251544 6.1997783 10.1889172 11.7596778 10.0221685 11.9835840 12.5204233 8.6725548 11.2659630 10.6836814 10.9728367 10.5085014 3.4303923 13.0327806 9.1516975 4.0007031 9.1079507 9.4214834 1.3913828 3.9095619 11.7895416 10.1421363 10.6359992 9.6087919 4.7610352 6.9558521 12.3862611 11.8976261 9.1714495 9.9657843 1.230300 1.590700 0.725220 -0.128400 0.931200 0.493160 -0.101190 0.233760 -0.026475 0.061758 0.061758 0.801450 0.977860 0.491430 -0.082967 0.512880 0.512880 0.569120 0.374910 0.031682 0.431380 0.097215 -0.139260 -0.138880 0.427510 0.170420 0.170420 -0.178570 0.135350 -0.444400 -0.142610 -0.087215 -0.133100 -0.805610 -0.795300 -0.795880 -0.495080 0.345470 -0.026475 0.637580 -0.425630 -0.478940 -0.841400 1.238000 0.279590 0.279590 -0.442350 -0.110800 -0.110800 -0.140890 -0.082967 0.101580 0.551550 0.569120 0.422300 -0.412370 0.031682 -0.232540 -0.151350 -0.144290 -0.158640 -0.138880 0.575540 -0.442670 -0.178570 -0.455460 0.114000 -0.505790 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.308 0.032 -0.138 -0.120 0.567 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.154 -0.154 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 0.000 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.308 0.032 -0.138 -0.120 0.567 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.154 -0.154 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 0.000 7.44127929 13.54586830 5.95585213 8.86476651 3.12908515 12.09443426 1.97096406 5.85360150 9.09162923 10.77750906 4.40836541 8.44708447 2.29289952 10.95014643 9.11816451 -1.61396164 7.00070652 10.36291902 4.87785220 8.53701334 7.92918324 6.09335523 11.80490368 0.82692468 9.22441295 10.49452142 6.21888770 NA 9.12998976 3.70792229 14.22475771 12.80990072 6.67139953 10.38035034 8.73804023 9.93481885 2.38598316 2.55591429 -0.02899914 7.82894061 8.90759734 8.07424745 11.00116679 3.74354728 7.02566338 6.56092279 11.66183046 6.29888555 11.07184075 4.89378933 12.89416312 2.08644411 4.77831373 10.57555286 7.45944227 4.82894125 8.26863978 7.32851158 6.23148617 1.97096406 13.82813052 NA 10.86476659 NA 10.07643150 4.21888964 7.58075377 7.08990063 14.008604 7.120707 8.920300 12.405848 10.207488 11.268067 7.816449 11.745884 9.646328 11.095081 13.830171 12.341828 10.388460 9.081225 4.955852 8.696610 10.719152 9.767540 7.366137 8.901697 8.923215 6.274741 9.314774 4.614816 4.515277 11.056211 6.993327 2.292900 9.906616 8.398817 11.816972 9.813834 8.480075 8.669085 6.298886 5.940585 13.142918 9.694905 10.205378 10.237356 12.789342 10.685491 9.704540 9.233837 NA 9.448232 5.861730 11.191136 6.824788 9.909559 10.188917 7.310809 14.771960 10.613613 11.792202 11.768216 10.880603 9.070746 1.385983 TCGA-E9-A245 47 1 NA 26 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 10.2719473 9.4308508 11.7394412 9.2785198 8.5951922 8.5083875 11.4044265 9.8503070 9.2436746 13.8291268 8.7474586 10.9038968 2.0821235 12.6107396 4.7066134 10.8667576 7.0517495 8.0324354 9.0421247 13.6218470 4.7450867 13.6339111 4.3045183 10.2894381 10.9673106 7.4744401 -0.5028731 8.4100498 11.0488685 4.0207244 7.2653450 6.2250802 2.6670746 4.1975981 9.5319592 9.8612949 10.9581280 10.5236837 10.0029718 11.1007866 9.9390670 11.0343786 14.4453449 8.9567354 10.7295811 11.9213265 11.0004891 4.4513562 1.8190959 8.8303155 10.2301755 1.0820894 11.1984667 4.4513562 4.4971589 3.8190857 10.3582471 11.8849084 10.3316313 12.4184433 12.7213127 9.2148366 10.7929292 10.7854496 10.4794409 11.1854106 5.3454070 11.6392673 11.1616075 0.4971269 10.6238648 8.7894818 4.0194706 4.7066134 10.3101397 10.2899505 10.8770800 9.1063389 3.6670860 5.5415551 11.6073173 11.3367577 10.1091072 9.3889440 8.3195e-04 4.5428e-01 4.5428e-01 -7.8863e-03 -9.4046e-03 -8.2515e-03 0.0000e+00 2.7728e-04 2.7728e-04 -6.7813e-03 -6.7813e-03 -6.7813e-03 1.2481e-03 5.1359e-03 5.5459e-04 5.5459e-04 5.5459e-04 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -4.1585e-04 -1.5243e-03 -1.5243e-03 -1.5243e-03 -4.7079e-03 -4.7079e-03 -4.7079e-03 -2.7707e-03 1.2346e-05 8.3195e-04 4.3021e-03 -7.8863e-03 -8.2515e-03 -5.2610e-03 0.0000e+00 0.0000e+00 2.7728e-04 2.7728e-04 2.7728e-04 3.6202e-03 8.3195e-04 -6.7813e-03 4.4411e-03 4.4411e-03 4.4411e-03 9.6189e-04 2.5533e-03 6.5262e-03 -8.0244e-03 5.5459e-04 5.5459e-04 5.5459e-04 -1.1087e-03 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -4.1585e-04 -4.1585e-04 -1.5243e-03 -1.5243e-03 9.7064e-04 -4.7079e-03 -4.7079e-03 -2.7707e-03 -1.9399e-03 5.5459e-04 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4744401 11.7337725 8.2850628 9.8634824 1.8190959 11.5264474 3.1975981 2.4971525 8.7331743 7.7066134 1.8190959 6.7123537 1.8190959 10.6076435 9.0285418 2.4971525 7.5899178 9.1589383 12.2871014 10.6770693 9.8261156 7.6315867 10.2702994 3.7450867 11.0300032 10.1845359 4.0821235 -0.5028731 10.7397389 3.8190857 12.9640015 12.5769783 7.7732850 11.0617861 7.6720858 9.4145324 6.3173384 -0.5028731 1.0820894 3.8190857 9.2335622 10.1544787 9.9728937 5.0517506 9.9038648 7.1553718 10.5659385 4.4971589 9.8980396 0.4971269 13.3058228 2.3045110 11.2310229 9.8426764 7.4038105 4.6670860 8.5739758 7.7403340 10.6820356 1.8190959 13.5713853 2.6670746 11.5087369 -0.5028731 9.3457831 5.3798046 7.4744401 9.7662869 12.079385 4.020724 8.964766 12.610740 10.298230 10.614803 13.621847 13.642854 9.317339 10.407053 12.824151 10.513272 8.830316 7.773285 1.819096 7.910788 10.796941 11.101250 7.997006 8.807773 9.350470 8.596087 10.282506 6.036319 9.804361 8.747459 7.927613 3.667086 7.104491 6.685007 9.230176 9.417513 7.796368 9.795223 9.990015 4.706613 11.915840 10.958128 10.688836 10.289951 11.306124 9.571302 10.554475 9.495751 3.197598 10.424975 5.225082 11.198467 11.014338 11.641181 10.358247 7.176640 14.075710 10.769790 10.318934 13.236413 10.127427 10.032436 3.745087 TCGA-E9-A247 59 0 NA 1186 breast stage ia t1c n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 9.6469748 8.1959337 11.5016307 7.7823116 9.4662645 9.5839974 9.4197411 9.7949850 8.7107899 12.6394466 11.8976797 10.2694209 NA 13.0123615 2.5249162 8.7709512 8.5294247 8.8947390 7.8859898 13.5578301 1.7879757 13.8769944 4.4509209 9.8544283 11.0601988 2.7265479 -1.7968615 7.0702745 10.1571917 2.2029818 6.4269977 7.4814451 NA 2.2904539 9.1916801 10.9086277 9.8117122 9.3704134 9.5067761 11.4593514 3.3322783 12.0804712 13.5944403 6.9561787 9.7926465 10.8407523 10.7380276 5.3219353 0.2030132 8.3463785 9.9440408 -0.2120661 10.6863073 3.2029975 4.2904613 4.5780330 9.3438251 12.3939003 10.6407474 12.0325199 12.5759964 8.1888371 11.0103503 10.7562118 11.1313286 10.4321146 3.9578867 11.4153397 12.5332120 -0.7971122 9.9880390 9.3251761 3.7037984 3.0103502 11.0983813 9.7728510 10.6986006 9.4197411 2.0103502 6.6624263 11.9108936 11.4669980 10.2747929 9.8172451 -0.3871600 0.3719900 0.3719900 -0.0074720 -0.4086000 0.3869000 0.7470800 -0.0026322 -0.0078863 1.3554000 0.3621500 0.3621500 0.4173100 0.3813800 0.3800600 3.6569000 3.6569000 0.7408100 0.7117400 -0.8442700 0.3875000 -0.8252900 -0.0033243 -0.0033243 0.3787400 -0.0134020 -0.0134020 -0.0134020 1.1115000 -0.3871600 -0.3871600 -0.0140900 0.0000000 0.3708400 0.3623300 -0.4226500 -0.4131600 0.4042700 -0.0162920 0.3782500 -0.9319700 2.1551000 0.3723200 -0.4052800 -0.3926300 0.3577300 0.0029133 0.3813800 -0.8291100 0.3800600 0.3582000 -0.8228500 -0.8228500 0.7408100 0.5855500 0.5855500 -0.7962800 0.3875000 -0.4130000 -0.8498200 -0.4174000 0.3787400 0.0108420 -0.0134020 -0.0134020 1.0913000 -0.3804400 -0.8709900 0.417 0.417 0.380 -0.443 0.715 0.715 -0.769 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.387 -0.015 1.091 1.091 -0.393 -0.826 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.102 -0.102 0.417 0.417 0.380 -0.443 0.715 0.715 -0.769 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.387 -0.015 1.091 1.091 -0.393 -0.826 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.102 -0.102 7.9810723 12.4398317 8.6878183 9.5599974 3.0609812 10.5996001 1.9034240 1.3728964 9.6913375 7.8999629 0.2030132 8.7572003 0.2030132 10.4875303 9.1838490 5.1455104 6.6868114 9.7879579 7.0135672 9.6685617 9.9019735 7.8158636 10.5561422 -0.2120661 9.8355362 9.0848740 3.7879548 -1.7968615 9.9198148 4.3928188 11.9336777 11.8400730 7.3451027 10.0235732 10.8015132 9.8807149 3.9309171 0.7879339 1.6624334 1.3728964 9.6160943 8.7196804 10.0841093 3.3729242 5.8528254 6.7575847 10.4038939 5.4509242 9.9587174 -0.7971122 10.8912456 1.0103502 4.2253598 10.5575367 6.1354466 2.5249162 9.5850790 6.6376233 5.6459379 NA 13.9077095 0.5249663 10.2977329 -1.7968615 7.6988505 4.1098871 8.0374662 7.5136084 15.179135 7.578034 8.823215 13.012362 9.402668 10.796386 13.557830 11.970869 12.900126 10.747718 12.433991 11.040426 8.346379 8.892993 3.984352 7.795453 10.984355 10.890152 8.757584 8.783225 9.588318 9.285144 10.259149 4.269086 4.311518 11.897680 5.678728 2.290454 8.003895 8.111388 11.468024 8.778535 8.337422 8.830529 7.225363 3.694847 14.523974 9.811712 11.133363 10.866553 11.438262 8.470952 10.385700 7.214223 2.726548 8.987630 3.629263 10.686307 5.332278 11.037466 9.343825 6.332278 13.290334 10.192035 9.806158 12.530688 11.116820 9.763328 1.903424 TCGA-E9-A248 51 0 NA 59 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 6 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 10.7654459 10.1285822 12.2667304 10.2733497 8.2230470 9.9921631 9.8717094 10.1410444 10.0266009 13.2377233 11.2414898 11.0430738 3.4172584 12.2993415 4.8647111 8.1721419 3.5823151 9.3798873 10.0063095 12.2542609 NA 9.6419869 7.6697766 9.3212273 11.5979169 5.3153742 2.5427781 9.6495661 11.3875781 0.3728407 9.1218914 7.2493771 0.3728407 7.0310720 10.1570860 10.5774313 9.5484097 10.8427563 12.4475870 11.7398653 9.6749277 11.8020053 13.9633595 8.3923118 8.6754991 11.4869278 11.3590577 3.2308486 2.5427781 10.0741666 13.0303461 NA 10.8274165 6.2493771 8.5688473 5.8404658 10.9774134 12.2414898 10.4856254 11.8308822 13.3702161 8.0505795 11.0654756 10.4712048 11.5387093 11.4129786 5.6112639 11.8593181 9.5327315 4.5823151 9.3175723 10.1176940 2.0744027 6.2057502 8.9709126 10.9257693 9.7554842 10.8374059 2.0733061 9.7854299 13.4596598 11.9946831 9.6034811 8.8687152 0.0770370 0.0770370 0.1786400 0.0615860 0.0615860 -0.2116200 0.0076558 -0.0652400 3.5881000 -0.4796000 -0.4531300 0.7063600 -0.1347700 -0.1347700 0.0067417 0.0067417 0.0067417 -0.1980600 -0.0379590 0.2156900 0.1072400 -0.2200300 0.0333450 0.0333450 0.0333450 0.6190700 3.6569000 -0.0156660 3.6569000 0.0770370 0.0770370 -0.0206110 0.0615860 -0.2116200 -0.2116200 0.0076558 0.0076558 -0.0652400 -0.0652400 -0.4592300 -0.1003900 -0.0798020 -0.4648800 0.0084116 0.0084116 0.0084116 0.0344730 -0.1347700 -0.1347700 0.0067417 0.0067417 0.0067417 0.0067417 -0.1980600 -0.0379590 -0.0379590 -0.1665600 0.1072400 -0.2213400 -0.1986200 0.0333450 0.0333450 -0.2275400 -0.2191600 -0.0156660 0.1169000 -0.1141000 -0.1734600 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 0.000 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 0.000 10.5670014 10.9746309 4.5823151 8.7260069 6.2493771 11.0988653 4.6207858 -1.6272707 8.1160117 6.5327315 -1.6272707 8.4859903 5.3035981 10.6296585 9.7249036 2.3728685 10.1950326 10.1664634 8.3458399 9.3328621 8.3781761 8.0239118 9.4956882 2.8322824 9.3917557 9.7369948 1.6947911 NA 10.5156054 1.5428028 12.7348724 12.8107422 8.3153747 10.2292857 10.1352422 11.3842621 6.8526406 2.0733061 -1.6272707 5.6674806 9.0094846 8.0540985 9.7705347 6.6992893 9.3772984 5.8964220 9.9398655 7.1344109 10.2432248 4.1007843 10.3903645 4.7304117 2.9578218 9.2532320 5.4412079 9.6148433 8.9699816 9.4294978 10.5302070 2.6207975 13.5340314 0.6947465 9.9667181 NA 9.2331712 3.6947911 8.8727060 8.1310832 9.011766 11.592634 8.233947 12.299341 10.673164 10.395921 12.254261 8.207331 9.699290 11.047273 13.277824 9.722141 10.074167 8.038196 1.694791 8.386881 12.705946 11.205750 6.350140 9.269193 8.820976 10.029732 10.893275 8.226170 7.255504 11.241490 7.389668 2.372869 3.957822 9.119148 12.130042 11.034193 8.261603 8.039972 9.797551 10.792820 11.238000 9.548410 10.829984 9.681768 10.481385 9.793873 10.934387 9.565769 NA 9.780542 10.726558 10.827416 6.100780 11.099025 10.977413 8.281253 13.840049 10.482364 10.852388 12.952117 10.447336 10.193438 5.935101 TCGA-E9-A249 45 0 NA 217 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 1 4 4 4 1 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 11.05459496 9.73713206 11.53874349 8.50654284 8.67704905 9.39285189 9.98552875 9.99637194 8.92654122 12.21708712 11.03169603 10.39228576 5.92262603 13.15014798 4.91002745 9.15861953 7.06012955 8.32980172 10.80207630 12.96545133 1.39906169 14.42614087 5.26695890 9.50116603 11.11227887 4.36254002 -1.92303052 8.72156030 9.54270263 2.72100073 8.21156225 8.35790692 NA 2.88450024 10.15428561 10.25953049 10.86033907 11.02769206 9.94441485 11.21476777 2.53657516 12.47801560 14.00817371 8.37485474 8.99972045 11.41893292 11.11227887 4.12152937 -0.33788567 8.92810438 11.48068081 -0.33788567 11.14641810 2.98402419 5.39001758 4.07713189 9.66819094 12.23850428 10.97724822 13.50611782 12.59701807 7.54270224 11.36888242 10.89048644 10.86544664 10.62619882 4.80505508 12.05923845 11.01432607 0.07710624 9.94865647 9.21796593 3.57507025 4.67705151 11.66221605 10.25362096 10.26726951 9.88851085 1.53655030 11.11828191 13.01478583 11.66151149 10.08696471 9.01671526 0.7090700 1.0874000 1.0838000 0.0094491 0.0094491 -0.3063900 0.2231400 -0.3170400 -0.3170400 0.0033299 0.0033299 0.0033299 0.0047190 0.0087528 0.1416200 0.1416200 0.1416200 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.3232100 -0.0220580 -0.0220580 -0.0220580 0.2283900 0.2283900 0.2283900 0.4183100 -0.3168100 -0.3068600 -0.2947300 0.0094491 -0.3292000 -0.3206300 0.2231400 0.2231400 -0.3170400 -0.3170400 -0.3170400 0.2816900 0.2785300 0.0033299 -0.0667880 -0.0667880 -0.0667880 -0.0667880 0.0087528 0.0087528 0.1416200 0.1416200 0.1416200 0.1416200 0.0000000 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.3232100 -0.6081500 -0.0220580 -0.0220580 0.2476200 0.2283900 0.2283900 0.4183100 0.0045800 -0.6761900 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 -0.317 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 -0.317 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 0.000 7.29630505 11.87307432 7.93822285 9.21668742 3.20642443 9.68862204 -0.92275700 NA 9.00565458 6.54066122 -1.92303052 5.82533026 2.46944320 10.22179445 9.59037035 0.39911639 6.78103966 9.67379190 8.45434659 10.29569938 9.36447920 7.43688557 9.75661620 1.77757752 10.74911940 8.66865846 7.75309304 -0.92275700 10.23889789 2.53657516 13.92414455 11.80951561 6.27189250 9.77844269 9.07290327 9.32268892 2.16459322 1.88448070 0.88448070 9.32090522 8.94981096 8.79309799 10.29024042 2.16459322 7.18304479 6.65078322 10.55817874 7.42364960 9.39058601 NA 10.06440017 0.39911639 3.56899277 10.67269671 7.51401413 3.39906169 7.57698235 7.16989294 4.69184679 0.07710624 14.48048111 -0.92275700 9.86054370 -0.92275700 9.61483994 4.03133344 7.93511730 8.07995138 13.266642 5.953654 8.998977 13.150148 10.177470 11.507589 12.965451 12.048231 9.515928 10.862384 13.760323 11.361960 8.928104 8.856035 -1.923031 7.733561 11.158453 10.970058 8.126985 9.258910 9.313150 9.375199 10.364430 5.805058 8.665851 11.031696 5.452177 5.469453 6.434688 7.675896 11.429455 10.493406 9.481746 8.851923 11.516318 4.452174 12.264985 10.860339 10.541682 10.173192 10.609979 9.134451 10.602657 9.437435 -1.923031 9.473195 4.226886 11.146418 7.631725 10.563192 9.668191 7.383198 14.283903 9.817338 10.617749 13.169563 11.073610 10.179112 1.984042 TCGA-E9-A24A 69 0 NA 747 breast stage iia t1c n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 5 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 0 11.3452276 10.2999497 11.6613560 10.0563491 8.6550634 9.7046526 10.5145241 10.0900886 8.7566014 12.7617820 11.6425304 10.4660939 1.0701145 11.9760250 3.9066020 9.1453888 5.2285301 8.5981363 10.8283241 13.5161133 0.8476763 13.5369420 6.1453881 9.4982337 10.4528792 7.0797290 -0.7372061 9.7887560 10.3268149 2.8477164 7.3342080 7.8756142 NA 4.5665290 10.3748595 11.4636445 10.8700762 12.4712851 10.4673171 11.0530944 1.0701145 11.8714627 13.9451370 9.2328231 8.9431055 11.7952236 11.7869203 3.6202931 1.5846739 9.4703703 11.8430045 -0.7372061 11.3458928 4.8626597 7.0604074 4.6550656 11.1741379 11.9309661 10.4873506 12.6393461 13.3494627 8.0813279 11.0459488 10.9385640 11.6436128 11.4271815 5.2169437 12.2133929 10.6114740 -0.1523237 9.8760750 9.2500099 3.0711277 6.8326014 10.5860822 10.8841110 9.9106540 10.4077227 2.8477164 8.3686544 12.4300072 11.7485752 9.6577445 9.4544221 -1.2661e-02 9.2825e-01 9.2825e-01 -2.9949e-03 -2.9949e-03 -6.4038e-04 6.0228e-03 -2.7181e-03 -1.0180e-02 1.0895e-02 1.0895e-02 -2.6874e-03 4.0771e-03 4.0771e-03 5.7447e-03 5.7447e-03 5.7447e-03 1.2290e-02 0.0000e+00 -2.1642e-03 8.8463e-04 6.1618e-03 1.3127e-02 1.3127e-02 1.3127e-02 1.9136e-02 1.9136e-02 1.9136e-02 1.4383e-02 1.2648e-02 -7.7896e-04 -8.6364e-03 -2.9949e-03 -6.4038e-04 -6.4038e-04 -1.1042e-03 -1.1042e-03 -2.7181e-03 -2.7181e-03 -1.0180e-02 5.0488e-01 -5.3201e-01 1.0895e-02 7.5465e-05 7.5465e-05 7.5465e-05 1.7038e-02 4.0771e-03 4.0771e-03 5.7447e-03 5.7447e-03 5.7447e-03 5.7447e-03 0.0000e+00 0.0000e+00 0.0000e+00 -2.1642e-03 8.8463e-04 6.1618e-03 -5.2773e-01 1.3127e-02 1.3127e-02 -1.0561e-03 1.9136e-02 1.9136e-02 1.4383e-02 2.6884e-03 -5.3120e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 9.2023252 13.2960398 4.0176369 9.1400301 2.5106835 9.7813991 -0.7372061 NA 7.3044052 8.0242970 NA 7.9821345 -0.1523237 10.4470014 9.1222806 -0.1523237 6.1875579 9.8930130 11.7397452 9.5653849 9.7128592 8.6774311 11.3183673 5.5846739 8.6529149 9.0884997 0.5846739 NA 9.8989174 3.5846739 12.4209611 11.9863002 8.4074042 10.6172707 10.3378908 8.9120022 4.9351721 2.5106835 1.2627338 2.2627338 8.1560477 7.7364513 10.5645278 1.4326922 7.5612436 5.0176324 10.4957663 7.1238327 9.7004980 NA 12.7863079 3.3071370 5.4226165 8.9826565 5.8839922 1.0701145 9.7505859 8.4611909 4.5295336 NA 13.4609607 1.2627338 9.6153411 NA 7.5248410 5.5388702 8.3568234 8.7735101 14.4764480 5.2627451 8.4673170 11.9760250 10.8011967 10.9016343 13.5161133 13.0365033 9.3272663 10.9415661 13.5042077 8.3971723 9.4703703 9.4029366 0.2627939 7.9649184 12.0103095 10.644289 6.620298 9.545255 8.854268 8.376488 9.976257 7.950996 7.650763 11.642530 6.323442 4.145392 6.920958 7.066522 11.093855 10.135805 8.585801 7.642124 13.032222 5.004214 13.059287 10.870076 10.666557 9.413128 11.974090 9.156806 10.696853 9.708278 NA 9.165777 2.262734 11.345893 8.502345 10.368654 11.174138 7.713957 13.439237 10.529532 10.850289 13.167757 9.166628 10.377790 1.584674 TCGA-E9-A295 71 0 NA 375 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 4.508365e-07 9.77321390 9.73529911 11.34939160 8.65547885 9.20841264 8.56823204 10.14337199 9.56087140 9.89529050 13.87716162 11.42608650 10.61961751 -0.05020363 12.78836118 2.85674671 10.22829610 8.72133609 9.03730946 10.23640436 12.81509659 0.94987106 13.17746255 5.59370335 9.80595309 11.45392073 4.37610976 NA 11.23833493 10.89967330 3.34217070 9.78589690 7.25362722 2.27178421 5.21663335 9.39692989 10.00716144 9.36558844 9.85898960 9.51304279 10.77201908 0.53485845 10.84580051 14.05415870 7.78640229 9.70473418 11.05837109 10.77201908 4.34216358 5.56455499 8.68962729 10.46997417 NA 11.15502893 6.62932602 4.97221474 4.15929818 9.14951901 12.10703562 10.59325189 11.12477232 12.28118346 8.84920366 10.31069366 10.18944518 10.86497902 10.61651448 4.99424028 11.07040852 11.08138211 2.53480866 10.46997417 9.26272959 3.95030043 4.27177674 10.42101370 9.29746795 10.22713396 9.99492361 3.47341028 8.57555551 12.45329970 11.72071693 9.50922375 9.55532613 -0.3540400 0.6504300 0.6504300 -0.3539300 -0.0111580 -0.0027310 0.3444200 0.1702000 0.1702000 1.0070000 1.0070000 1.0074000 0.1019500 -0.2275700 0.7547600 1.5856000 0.5867300 0.3118200 0.3150300 -0.3489000 0.7166500 -0.3670000 -0.3902600 0.3012400 0.3012400 0.2102800 0.2102800 0.2102800 0.5396500 -0.3884700 -0.3540400 -0.0096410 -0.3539300 -0.0084226 0.0092104 0.3270900 0.3270900 0.1702000 0.1702000 -0.0108820 0.6772100 -0.0184510 1.0070000 -0.0151520 -0.0151520 -0.3559800 -0.0191380 0.1286400 0.1286400 -0.3827700 1.7605000 -0.7057400 -0.3818700 0.3118200 0.3150300 0.3184000 -0.3680600 0.7166500 -0.3670000 -0.7717300 -0.3902600 0.3012400 -0.3514100 -0.4349300 0.2102800 0.5396500 -0.3531300 -0.0313200 0.102 0.102 0.000 -0.354 0.312 0.312 -0.349 0.717 -0.367 0.293 -0.361 -0.390 -0.089 -0.351 -0.351 0.210 0.210 -0.354 0.296 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.327 0.327 0.170 0.000 0.677 0.677 1.007 1.007 0.000 0.000 0.000 0.000 0.102 0.102 0.000 -0.354 0.312 0.312 -0.349 0.717 -0.367 0.293 -0.361 -0.390 -0.089 -0.351 -0.351 0.210 0.210 -0.354 0.296 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.327 0.327 0.170 0.000 0.677 0.677 1.007 1.007 0.000 0.000 0.000 0.000 8.87614272 12.77569980 7.73120633 10.18944518 3.44234640 11.54160268 -1.05020363 2.40928231 8.62227187 10.92497806 1.27178421 8.19302064 6.35923827 10.33840213 9.16780423 2.40928231 9.97844334 9.53762416 8.25818582 11.95512028 9.64875968 7.73120633 10.88058398 1.27178421 7.95266147 9.97498611 7.15930020 NA 10.94313888 1.75719397 12.68296788 11.99441150 8.63984461 10.03797229 7.79219683 10.16901514 4.23525221 1.75719397 -0.05020363 3.80782887 9.09577888 10.71637553 10.17746252 5.40927891 8.23344424 7.51970229 10.03132999 5.85673676 9.47927725 NA 11.19480498 1.27178421 5.07913060 9.62129915 5.97675771 0.94987106 9.47340866 9.41847059 8.40927806 9.24216827 13.93435408 1.27178421 10.63503343 -0.05020363 7.63984425 5.97221474 8.26045949 8.96804668 14.2356220 5.9156308 8.5025156 12.7883612 9.6008982 10.6160707 12.8150966 10.5149487 9.2804386 10.5135196 12.8544812 10.7878687 8.6896273 8.6098425 0.5348585 7.5645565 11.0733214 11.144911 7.760419 8.346451 9.845422 8.337864 10.022395 5.832490 7.727924 11.426087 5.015935 2.856747 5.994240 6.004153 10.614294 10.003773 9.278521 8.821752 10.314528 5.915631 13.908075 9.365588 11.773214 11.143680 11.138435 10.286911 10.546502 8.013242 9.148292 8.497088 4.807829 11.155029 4.197771 11.140597 9.149519 6.711397 13.882338 9.754784 9.547899 12.235538 10.103399 9.053134 3.534809 TCGA-E9-A2JS 72 1 904 540 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 6.242351e-07 9.4306760 9.8855144 11.1573722 9.5389288 9.2040737 8.5601647 9.5132983 9.3128548 9.9919039 13.1692981 11.5809305 10.4143700 0.0483757 13.4144156 5.3089396 9.3245366 7.8297722 8.3808216 5.3214303 12.8005140 2.1638851 13.2938659 0.4634132 9.8007149 11.3643165 5.4858164 0.4634132 10.7372453 10.7234871 1.7853832 8.5442671 6.1499503 -0.5365868 2.3703317 9.5940204 10.6296128 9.4008235 9.3852906 9.0161188 10.9848048 3.8557705 9.7511621 14.1122005 8.4789067 9.7401557 10.9793959 11.5190711 4.8728386 6.7534682 8.3597821 9.6112906 -0.5365868 10.2002744 5.4176466 5.0781615 4.6333731 9.9037998 12.0016386 10.5136385 11.5325637 12.1779099 8.1127059 10.2468572 9.8042011 11.0213920 10.9203174 4.8032994 11.5786560 11.3061929 NA 10.4930821 9.8094093 2.9913903 5.4292343 10.0117900 9.9366481 11.2312203 10.7865045 3.7113738 9.0389889 11.0760879 10.2287359 9.8027430 8.7418991 -0.4343300 0.4181400 0.4181400 0.2028900 -0.0056757 0.8241200 -0.5069100 0.0072217 -0.2895200 3.6569000 2.4263000 1.5727000 -0.0200010 -0.4264700 3.6569000 1.9131000 1.8520000 0.4049300 0.4049300 0.0030522 0.3989400 0.7562400 -0.4301800 0.7984000 1.6038000 -0.1196500 -0.1196500 0.6922300 0.4176400 -0.4221100 -0.4343300 -0.0264410 -0.4322500 0.4359800 -0.9149200 -0.4481400 0.4121200 0.0134920 -0.2895200 -0.2895200 0.0956530 0.0956530 -0.4498600 -0.3275100 0.0955850 -0.0063668 0.0203430 -0.4264700 -0.4056200 -0.4455500 -0.4464200 -0.0132720 1.2533000 0.4049300 0.4215000 0.4025700 -0.0073339 -0.4318100 -0.0865180 -0.4182700 -0.4301800 0.7984000 -0.4114600 -0.1196500 0.6922300 -0.0469890 0.3850200 -0.4073800 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 0.309 -0.430 1.174 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 0.126 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 0.309 -0.430 1.174 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 0.126 8.0064815 13.3506227 7.7557715 9.7580704 3.5669491 9.5875711 1.9228829 -1.5365868 9.0521643 8.1145013 -0.5365868 7.0408782 4.4634524 10.9414609 9.0670761 7.3368939 5.7853779 9.4913557 9.0380432 12.1450176 9.5600265 7.5105735 10.1841214 2.1638851 8.2546125 9.4030289 3.1073029 NA 11.5530657 2.3703317 12.3414048 11.6608200 7.4549712 9.5308840 9.2708046 10.2299786 8.1000741 2.8557705 -0.5365868 1.7853832 8.5375912 9.3544740 9.6352520 3.5927321 9.5722813 7.4521341 10.2671773 6.3214303 10.1372005 NA 8.9401958 2.4634394 5.8121773 9.0876604 5.9524943 0.4634132 9.5248208 7.7534688 4.2708055 1.0484455 13.5743000 1.7853832 10.8762842 NA 9.4471560 4.1638932 8.0484122 9.0698549 15.171224 7.006482 9.202386 13.414416 9.816597 11.025454 12.800514 12.587167 10.627008 10.535917 12.042530 10.901982 8.359782 7.491356 1.270828 8.008414 11.167786 11.3504799 7.6308677 8.1673534 9.6245816 9.9608026 9.8623269 6.5349114 8.4000874 11.5809305 7.3582679 -0.5365868 5.7302351 8.4952886 10.2554265 9.9396895 8.0991858 9.6093819 9.9330915 4.3703387 11.3772909 9.4008235 9.7949266 9.5830393 11.7039429 8.9573052 10.6311814 9.1278971 1.2708279 9.6282623 3.3214375 10.2002744 7.3673317 10.8786633 9.9037998 7.7966049 13.1380834 10.1127059 10.1354330 12.3217222 9.9233936 9.8828833 0.0483757 TCGA-E9-A2JT 63 0 NA 288 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 11.1568959 10.1068131 12.0886306 10.2991107 8.6494649 10.3718537 9.7346808 10.5343056 9.7934307 11.7244511 11.2483543 11.0011091 1.0871912 10.7830307 4.8241874 9.0472243 5.2571464 9.4106525 7.7549256 10.9545012 NA 12.3001240 6.6212006 9.5810512 9.1693714 5.2571464 NA 12.9772333 8.8309347 4.0872252 9.9729188 7.4909447 NA 6.4447747 10.4083990 10.3555695 9.3602409 11.9928601 10.2546406 11.8261591 8.6746873 9.4809703 15.0643234 9.0880674 9.7286360 11.6117641 10.7812900 5.4329961 2.3096128 9.4937818 11.9691011 NA 11.1790985 6.0100547 9.1334369 4.7117151 10.6107844 12.0142596 10.3547894 11.0989156 13.1881037 6.4447747 10.5336165 10.6791374 11.4593619 11.9563021 5.5246279 11.7507805 9.8498812 0.5022287 10.3477499 9.3940435 4.5931147 7.7549256 10.8088912 10.2613158 10.4615375 10.4484352 3.5022542 8.2901626 13.2096190 12.4100895 9.9534710 9.4966133 -0.00567570 0.05039200 0.05039200 0.00069327 0.00069327 -0.00925910 -0.00097017 0.00444110 0.00444110 0.30729000 0.30729000 0.00044689 0.00402430 0.00402430 0.00305220 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00705760 -0.00304750 -0.00843850 -0.04983000 -0.04983000 -0.04983000 0.01363200 0.01363200 0.01363200 0.00583090 -0.01354000 -0.00567570 0.00000000 0.00069327 -0.00705760 -0.01240800 -0.00097017 -0.00097017 0.00444110 0.00444110 0.00444110 0.00055459 0.00055459 -0.05725000 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00402430 0.00402430 0.00305220 0.00305220 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00055444 -0.00705760 -0.00304750 0.00208050 -0.04102400 -0.04983000 -0.04983000 -0.04807200 0.01363200 0.01363200 0.00583090 -0.05864400 0.05850900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.5701984 10.9560450 3.8945753 9.8003225 9.5710381 10.6920844 9.7655291 NA 8.7165791 9.1425048 NA 7.8031618 4.5466537 9.7430512 9.7250548 0.5022287 11.2314557 8.5683491 9.4061419 9.4374250 9.3523529 8.3446102 11.4806129 3.3096128 6.1461155 10.7013188 3.0872252 NA 11.7731392 3.8945753 13.4971436 11.7824507 8.1852546 10.2335789 9.5120886 8.9719016 4.1461175 2.8241976 -0.4977713 3.4091465 8.6821691 9.4723657 9.4951983 6.5575418 7.6985915 6.1461155 10.0110451 4.7117151 8.8554067 -0.4977713 10.9227465 4.8598106 4.2026998 9.0539297 5.6683716 10.6951691 10.5078845 9.6029223 10.4038811 NA 13.8258073 3.2026998 10.5963376 NA 8.4241008 5.7690470 7.5356829 8.3910034 11.883240 5.928524 8.485253 10.783031 10.785348 10.089100 10.954501 10.720823 9.335150 11.258816 13.217364 9.706831 9.493782 7.263811 2.672176 7.524628 11.616328 11.022879 4.546654 9.311224 9.301541 8.156896 10.442698 11.250872 9.626381 11.248354 5.692084 3.672188 5.056848 8.228376 10.056849 12.291997 7.740665 8.584409 11.530857 11.048672 11.364742 9.360241 10.794006 9.870766 10.685275 11.376473 11.037535 9.111439 7.195747 10.457830 11.796306 11.179099 4.456458 11.271271 10.610784 8.595017 14.426052 10.037535 10.786506 12.389481 11.397078 10.177335 5.384903 TCGA-E9-A3HO 49 0 NA 1158 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 2.774378e-07 10.9007172 8.7470228 11.3739129 7.3777892 9.7385363 8.8918156 10.3460195 10.1583536 10.2073516 7.3483449 11.7508958 10.0052307 3.1407459 12.9083037 3.2719933 9.2322482 8.2562271 8.0081759 7.5590038 12.8169588 2.2078616 14.5041285 1.7484183 10.5003069 10.2307362 5.8777148 1.7484183 9.4991393 9.4983017 2.9963526 7.8905397 5.5428492 -0.2515388 4.0703636 8.7887222 9.5844826 8.7342744 9.6508075 10.2201075 10.4265924 13.6926869 11.8965911 13.9410720 7.9313232 9.9826511 10.8262495 9.9880309 4.9183576 NA 8.4349330 10.2119568 -1.2515388 10.0737378 3.8777148 5.5033201 4.2402838 9.1641741 12.0852179 10.3035007 10.4070901 12.1046092 5.7928267 11.1407498 10.8401983 10.1342948 11.1076329 3.1407459 11.2117013 7.5133036 6.9868375 10.1929297 8.7666326 5.5825861 4.3030209 11.2875912 10.2032457 10.3001407 9.5338849 2.8359039 7.6187973 11.3101976 10.3163885 10.3272768 9.7413707 -0.38917000 0.19390000 0.93142000 0.03411300 0.01852300 -0.81958000 0.77248000 0.62606000 0.33060000 0.02244400 0.02244400 0.03538300 0.00069327 0.01810300 -0.37673000 0.01000600 -0.39408000 -0.00387790 -0.00387790 0.48475000 -0.81143000 -0.41926000 0.02763800 0.02763800 0.02763800 -0.02903800 -0.02903800 -0.03694600 0.04599100 -0.38302000 -0.38917000 -0.31246000 0.01852300 -0.18999000 -0.81958000 0.01642500 0.01642500 0.62606000 0.33060000 0.01307400 0.36608000 -0.42375000 0.02244400 0.12255000 0.12255000 0.12255000 0.01740400 -0.36488000 -0.86650000 -0.38078000 0.01000600 -0.82252000 -0.82252000 -0.00387790 0.00736090 0.00805670 -0.81565000 -0.81143000 -0.38190000 -0.81565000 -0.82130000 0.02763800 0.37101000 -0.02903800 -0.82187000 -0.40196000 -0.04007300 -0.21639000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 0.000 1.752 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 -0.346 0.000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 0.000 1.752 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 -0.346 0.000 8.8517203 12.0520705 3.5557916 9.7069851 4.1551016 11.1773159 2.6553289 NA 9.0993715 7.6997168 NA 6.5963672 3.3922899 9.7989613 9.8464645 7.8037146 7.8279174 9.1267272 8.5083205 10.7904337 9.4680864 7.7596599 11.4894780 0.2944296 10.3976885 9.6568251 5.1746980 NA 10.5219837 3.1407459 12.9665415 12.2469077 8.7371172 10.3589958 9.8809320 10.1604729 7.0882826 3.5557916 2.6553289 11.2527548 8.7084342 11.0315207 9.2078641 3.9183576 4.4438718 8.7142167 9.4600993 7.1493122 9.4039632 NA 11.9439584 3.3333951 6.5686113 9.5191540 8.3611718 2.5557916 9.1525095 7.2362726 6.2641329 0.3334237 14.2372454 -0.2515388 10.1386014 NA 6.6553232 6.7142167 7.3106746 7.2442877 9.909810 7.773572 7.781855 12.908304 10.480600 11.005820 12.816959 12.198999 8.607967 9.747023 11.592550 10.313534 8.434933 8.586060 2.996353 8.101579 10.519509 11.051357 6.631075 8.333395 9.573391 9.623414 11.179481 7.074862 6.529793 11.750896 10.899449 4.105988 5.174698 9.528677 9.953004 9.792827 8.012875 10.238782 8.967601 5.333395 12.243139 8.734274 10.053924 10.841850 10.589210 9.437557 11.081588 7.337147 NA 8.926076 5.462677 10.073738 7.392288 11.096607 9.164174 7.523219 13.926864 10.293880 9.760359 12.011848 11.687093 10.419973 1.333366 TCGA-E9-A3Q9 78 0 NA 1001 breast stage iiic t3 n3 m0 female 2011 NA no infiltrating lobular carcinoma 22 white not hispanic or latino NA NA 2 3 NA NA 1 1 2 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 11.3646396 9.6420024 11.4355787 9.3198979 8.7805322 8.6987488 9.9880088 10.1098792 9.5251717 12.7749109 10.0888025 10.8103582 2.4521737 11.7453211 5.0542147 9.7428551 7.8395798 8.2958745 8.9857859 13.1894253 3.1683853 13.5507270 NA 10.1387585 9.9388693 5.3862902 NA 9.9700272 11.6409434 1.8147555 7.4934456 8.0939716 NA 5.0710890 9.7369194 10.5899010 10.4034627 11.0457025 9.8567112 11.3663495 6.2447368 11.3597124 14.2494341 7.0261494 10.1276310 11.5539661 10.9602556 3.2886834 2.3452544 8.4950099 11.1182751 -1.3551285 11.3769904 4.5755604 6.6727294 3.7741018 10.9197835 11.9283455 10.2913817 11.7297975 12.7627907 8.3452629 10.6623274 11.0108720 11.1560815 11.2898059 4.6221045 12.0862110 10.8109861 NA 10.3048189 8.9520239 3.3491388 6.1446684 10.0944876 10.4042952 10.3030344 9.4713714 0.9667258 5.2741796 12.8500817 12.0496985 9.3556295 9.5726009 -0.00512270 0.61863000 -0.00221680 0.00597000 0.00597000 0.00471900 0.00000000 -0.00182370 0.00375030 -0.00097017 -0.00097017 -0.00097017 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.03667400 -0.00193990 0.00055459 -0.00917860 -0.01702400 -0.01702400 -0.01587900 -0.01587900 0.00055459 -0.00512270 -0.00512270 -0.00512270 0.00485790 0.00597000 0.00471900 0.00471900 0.00000000 0.00000000 -0.00182370 0.00624810 0.00750000 0.00055459 0.00055459 -0.00725640 0.00597000 0.00217970 0.00217970 0.00069327 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.00304750 -0.03667400 -0.00193990 -0.00815180 -0.00346270 -0.00917860 -0.01702400 -0.00152430 -0.01587900 -0.01587900 -0.00512270 -0.05590300 -0.01642900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0176881 11.3769904 2.9667442 10.0489001 2.9522590 10.7146084 1.8147555 -0.3551285 8.7996410 7.2922811 NA 8.0626754 5.4777129 9.7382406 9.5873374 0.6447792 8.2428754 8.9802133 11.5062977 10.6213872 9.7903985 7.6837421 11.4616067 5.2297840 10.5097829 9.8784427 3.8927504 NA 10.7166205 3.0371362 13.2170495 12.4094873 7.4713712 10.9816085 9.0176881 9.0520909 6.6048245 1.2297725 0.2298340 2.9667442 8.8321751 11.2638967 10.9224010 6.2814479 8.7921044 6.3862902 10.3132648 8.1624925 9.5866043 NA 12.7411264 0.9667258 9.1762046 9.4659035 5.4471461 6.0794506 9.6837421 9.1878548 8.6462311 NA 13.8980427 0.6447792 10.7243078 NA 8.8160000 6.1366754 7.4392391 9.4824510 12.5083066 3.8927504 8.8951214 11.7453211 10.5972002 10.2222519 13.1894253 11.1098792 9.2703949 10.3951112 12.8073717 10.1781528 8.4950099 8.3487264 -0.3551285 7.7843744 11.0408926 10.480479 7.100150 8.491880 8.629241 7.697391 9.883670 8.043567 7.104255 10.088803 7.834647 7.195570 9.693991 5.756271 8.350455 9.575560 8.060565 8.997970 12.208853 6.539641 12.723545 10.403463 10.979376 9.690583 8.823488 9.560702 10.417138 8.745485 NA 9.514802 7.002375 11.376990 2.814755 11.082947 10.919783 6.948603 14.176570 10.258152 10.445723 12.644559 9.691947 9.380379 2.229772 TCGA-E9-A3QA 33 0 NA 918 breast stage iia t2 n0 (i-) m0 female 2011 NA no medullary carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 4.508365e-07 9.4216136 8.7192053 10.5897889 8.6525991 9.2637697 9.0707065 8.7020303 10.5582227 13.1196806 13.1888351 10.3155053 10.3479581 0.9032697 11.6286546 1.3183458 10.5244245 8.0681952 8.5990964 8.4242343 4.6581772 -1.6817699 10.7519113 8.1288976 10.1005420 10.2765161 5.7361773 0.6402507 13.7753315 9.6922785 2.3183168 10.1508204 7.6334755 -1.6817699 6.1127418 9.4183310 9.9200966 8.6933653 9.9823287 9.5996763 10.4511469 4.6037272 8.4920030 15.4850872 8.3137678 10.5210557 10.2779656 8.7991161 3.9330344 0.9032697 8.6025716 9.7664421 NA 10.1172026 6.0118132 7.8141806 5.8261213 8.4044621 11.5577752 10.0407064 10.6123721 11.9141661 8.3112642 10.1982919 9.8594225 10.8266159 10.7285122 4.2490660 11.6883321 7.4604330 3.9907552 10.8480004 9.5302142 4.0380586 5.8261213 12.1105061 9.2659628 11.5420259 9.7757067 2.0187766 4.9330344 12.2431384 12.0195240 8.9801039 8.9079770 0.113070 0.603220 0.316750 0.095363 -0.037399 -0.030404 0.087969 -0.221080 0.134650 -0.032996 0.164300 0.628250 0.158310 -0.113780 0.165650 0.247310 -0.214530 0.356590 0.054388 -0.217870 -0.205480 0.359530 -0.167260 -0.167260 -0.167260 0.156510 0.402110 -0.103030 0.070243 0.129330 0.113070 -0.316220 -0.037399 -0.030404 -0.211260 0.083776 -0.219730 -0.233580 0.134650 0.055943 0.052451 0.101760 -0.207060 0.059937 -0.224780 0.087916 -0.211560 -0.113780 -0.154710 -0.200500 0.247310 -0.214530 -0.214530 -0.247030 -0.215520 -0.224780 -0.342470 -0.205480 -0.195870 0.089851 -0.167260 -0.167260 -0.187100 -0.209210 -0.103030 0.046559 -0.181690 0.099579 0.158 0.158 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 0.157 0.157 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 0.000 0.158 0.158 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 0.157 0.157 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 0.000 9.7597140 12.8712951 -1.6817699 9.8516555 5.1638167 12.0642102 6.6357384 2.7777669 9.3729301 7.8418876 3.1763068 7.4242343 2.4058018 10.6703693 9.6775264 4.4680750 8.3695350 9.7767324 7.8081739 10.5035110 9.2939015 6.6977043 10.7076883 3.5277835 8.0597927 10.2516477 3.3627224 -1.6817699 11.0600035 2.0187766 12.2522009 12.6599142 7.0496449 9.3034563 11.0970190 10.3179736 6.5423277 4.8101809 NA 0.9032697 8.0065763 10.5013408 5.5567298 2.3183168 9.4189489 7.4680733 10.6700933 3.4476056 10.2017328 7.1480484 12.3800346 4.4476056 3.9907552 9.8288626 8.0926847 8.0428397 10.1172026 8.9070406 9.9084450 6.6846476 13.7776294 1.1256511 11.8125564 NA 10.1033695 3.4476056 8.0898154 8.8786588 12.697680 9.432068 8.358616 11.628655 9.363403 10.876747 4.658177 11.407611 8.185604 10.693908 13.643385 12.015185 8.602572 7.933036 5.761269 7.549547 10.874832 10.5308222 3.9032890 9.3627199 8.8690725 8.2131436 9.5452919 9.0581065 7.6581758 10.3155053 11.0986606 -1.6817699 8.2401669 10.0463271 11.2781467 11.1848321 7.5662535 9.0152935 9.1313052 8.7009498 10.7617719 8.6933653 10.3140930 10.9337256 11.6560871 10.9298118 10.1598903 7.9330355 0.6402507 9.8760001 9.2984654 10.1172026 4.6581772 11.2703390 8.4044621 7.8942624 13.8472072 10.8099285 10.0183321 12.6189644 10.9713948 8.7550374 2.9032890 TCGA-E9-A3X8 48 0 NA 926 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 9.07443559 8.03868090 10.18275151 3.77457624 9.16811724 7.58560406 8.80799659 9.21633190 11.62140699 8.85443925 10.79018760 9.36168130 1.77458678 12.44775631 -0.03283139 12.02943335 7.45505839 7.80956879 8.98541874 11.49591682 0.55218030 13.29652436 6.69513919 10.82247244 9.05997576 4.61107203 -0.03283139 10.53184441 9.39348334 1.96720550 9.65109045 6.07574226 NA 4.66765941 8.12709000 8.68146402 8.62721430 10.48291835 8.31594656 9.43584254 0.96724240 11.40158615 13.73302260 3.09320521 9.35308087 9.28801912 9.13589061 4.96721934 5.66765941 6.25262002 9.78899249 -1.03268381 10.48488793 5.11696769 5.19603649 3.49077548 8.23634528 11.62966439 10.90753215 12.93173991 11.37342353 8.87861040 10.21158233 10.08810435 9.16689090 9.03196140 -1.03268381 10.55874088 9.44092438 -0.03283139 9.62185463 7.80642202 2.77456570 2.28915574 10.32751694 9.05468137 9.71121147 8.30037407 3.35953523 9.25608459 12.40262836 12.83420763 9.16934230 9.60112189 -0.18043000 0.56170000 0.56170000 0.00819590 0.00819590 -0.18244000 0.00791750 -0.18692000 -0.18207000 0.19527000 0.19527000 0.19527000 -0.00041585 -0.00041585 0.00299600 0.00299600 0.01000600 -0.17680000 -0.17680000 0.00597000 0.00000000 -0.18131000 -0.17866000 -0.17866000 -0.17866000 0.00194180 0.54471000 0.54471000 0.00513590 -0.18043000 -0.18043000 -0.16929000 0.00819590 -0.18244000 -0.18244000 0.00791750 0.00791750 -0.18692000 -0.18207000 -0.19089000 0.19664000 0.19664000 0.19527000 0.00277190 0.00277190 0.00277190 0.00903120 -0.00041585 -0.00041585 0.01628600 0.00299600 0.01000600 0.00212620 -0.17680000 -0.17680000 -0.17563000 0.00597000 0.00000000 -0.18131000 -0.37459000 -0.17866000 -0.17866000 0.00772980 0.00194180 0.54471000 0.00513590 0.19619000 -0.37381000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 0.000 9.8582428 12.9941742 5.0333085 9.8368124 3.8741084 9.8567224 3.6110779 NA 9.8673306 9.0757431 NA 6.9784462 3.9672147 9.8329519 9.7112115 4.0116119 9.1778899 7.8741090 10.7370564 12.1554983 8.6934368 6.2433435 10.2474093 1.5521803 8.8590023 10.5313680 5.4750135 NA 10.0965016 2.1371428 14.3146323 12.4715410 7.8920309 8.9714389 8.7567521 11.3813752 3.4907755 1.2891262 0.5521803 2.5521803 9.7212710 12.4061403 9.1912201 3.9214173 7.8362568 9.9686268 9.9861141 5.2709998 9.4215179 0.5521803 11.6750090 1.5521803 4.5521803 9.7232577 7.4710444 6.0225010 9.2398484 9.2008383 10.7099490 0.9672424 14.5351449 1.9672055 11.1558074 NA 8.4368602 5.1169677 7.7648802 9.4700504 13.437068 6.646698 8.025210 12.447756 10.370763 11.429721 11.495917 10.027914 8.872606 9.249149 12.727107 10.289147 6.252620 10.140896 1.774587 7.215146 8.990973 10.01297826 3.61107793 8.45103427 8.17178978 7.04936721 9.12933300 7.51411279 8.32256950 10.79018760 9.02250098 2.96722395 7.76488021 6.76798842 8.27555745 10.47550850 7.14906625 11.34795017 4.09649801 7.09650117 11.78580072 8.62721430 10.73416148 10.18517624 9.37872944 10.28010145 10.04736989 5.74857931 NA 9.86457246 8.15209365 10.48488793 6.94449890 10.59018543 8.23634528 7.50249371 15.07941366 10.35038276 9.72210599 11.63654655 11.16719752 8.74035791 -0.03283139 TCGA-E9-A54X 85 0 NA 727 breast stage ia t1b n0 (i-) m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 9.90132837 9.47576565 11.18623107 7.93830344 8.44526362 8.41620091 10.63514437 10.09649920 8.38654111 13.89410050 12.34693842 10.70074279 6.49773051 12.15122570 3.07739683 10.36877304 7.14475408 9.66324534 9.57865101 13.68342327 3.63379155 14.23819747 3.98993826 9.17465060 10.77538880 7.43701962 -1.01013438 7.37795403 13.07000433 0.57492498 7.04521906 6.44114813 NA -0.01013438 9.03159535 10.48978225 9.44320693 10.92325817 9.63198805 11.12243602 14.00826691 11.88134033 14.40630504 6.04900991 10.40936983 9.64278134 10.79890050 4.69037798 3.63379155 7.78435217 10.68472951 NA 12.63919250 1.31185183 3.15985519 2.98993826 10.11405762 11.81390057 10.93866857 11.63559475 12.48329145 8.39507780 10.64009053 10.17859315 10.86338044 10.19022186 3.38225223 12.51936688 9.87791844 NA 10.07408030 8.97150361 5.32960800 2.89683370 9.67380815 10.06675198 10.07408030 9.71274382 -1.01013438 8.05333131 12.10806629 10.44011659 9.93757333 9.48379180 0.0091705 0.0091705 0.0091705 0.0058309 -0.0141290 -0.0302060 0.6525900 -0.0153290 -0.0153290 0.7837500 0.7837500 0.8018400 0.0000000 0.0000000 -0.0044312 -0.0044312 -0.0044312 0.0284810 -0.0189560 -0.0213730 -0.0059701 0.8508700 -0.8360700 0.0225850 0.0225850 0.0758470 0.0758470 0.0758470 0.0140510 0.0091705 0.0091705 -0.0056757 -0.0141290 -0.0036011 -0.0302060 0.6525900 0.6525900 -0.0153290 -0.0153290 -0.0153290 0.8042200 0.8042200 0.8098600 -0.8680600 -0.8375200 -0.0058140 0.1061400 0.0000000 0.0000000 -0.0044312 -0.0044312 -0.0044312 -0.0044312 0.0039595 -0.0189560 0.0034687 -0.0213730 -0.0059701 0.8411200 0.0894600 -0.8360700 0.0225850 -0.0074720 0.0758470 0.0758470 0.0140510 0.0059700 0.0303100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 0.118 5.87258008 8.84324586 6.82282573 7.65171475 1.47793632 10.11405762 -0.01013438 NA 9.56830901 5.31186273 2.15985519 3.15985519 -0.01013438 10.34032303 9.42038892 1.98993826 3.74482846 9.29827546 12.37795360 10.59402614 9.87004779 6.73140321 8.90581569 -0.01013438 9.58984923 9.36823121 3.38225223 NA 10.43546858 0.57492498 12.77334385 13.06958775 6.15986125 10.40567812 6.07739897 9.39614129 -0.01013438 -0.01013438 0.57492498 10.63108491 8.81011530 10.23548906 9.81330358 NA 9.24457529 7.57489850 9.64098797 4.03433018 9.36388900 -1.01013438 9.90282564 -1.01013438 8.97720034 10.40942255 7.38358421 NA 9.10887751 4.77129402 7.78435217 -1.01013438 13.80251476 -0.01013438 11.11146983 0.57492498 9.35188005 1.79730356 8.24023465 8.78921801 14.710057 5.449367 9.477776 12.151226 10.041050 10.150438 13.683423 12.785672 8.343083 9.716154 12.172641 9.540683 7.784352 8.228341 2.896834 7.006745 11.638294 10.512518 5.967217 9.222357 8.593563 7.955721 10.130415 4.159863 9.869520 12.346938 7.893818 NA 9.714450 7.914808 10.444236 9.077399 8.540683 10.510064 9.749825 0.574925 11.330346 9.443207 10.331455 10.166109 11.091584 9.262566 9.773753 8.139683 NA 9.036897 -1.010134 12.639192 4.944132 10.862996 10.114058 6.655272 14.148112 10.216349 10.271866 12.341428 10.811710 9.006745 NA TCGA-E9-A54Y 63 0 NA 725 breast stage iiia t2 n2 m0 female 2012 NA no infiltrating lobular carcinoma 8 white not hispanic or latino NA NA 5 3 NA NA 1 1 3 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.81477e-07 8.3134635 7.2390390 9.2684395 4.4926095 10.4001358 7.2725915 8.7780147 8.4759065 9.6667498 12.6329715 10.9882573 9.8667369 1.8296466 13.3992659 2.5666203 9.6262281 2.7041194 8.3688063 7.9311854 12.1765306 NA 14.1510120 4.7682479 11.0640659 10.3842365 6.5666127 3.5666082 11.2046870 11.5640750 -0.7553565 5.8145402 2.2446740 NA 1.5666203 6.5393062 9.8520154 8.1694976 10.2425702 8.8939413 9.3026768 2.7041194 10.9394783 13.2359412 2.1165311 9.4146102 8.7799606 10.0480090 4.4926095 -0.7553565 6.9381717 8.2642760 NA 9.6530149 2.0520333 3.5666082 4.2446816 8.3294936 12.0031165 10.1849987 9.8315248 11.1022774 8.9451248 9.6989843 9.6316253 8.8685667 9.3558208 1.8296466 11.1319057 8.4492564 NA 9.6719980 9.4504782 3.0520333 NA 10.5873154 8.6709497 10.2918090 10.7910973 -0.7553565 7.0964337 10.8907938 9.0407248 9.7244654 9.5300873 0.65811000 1.42800000 2.35660000 0.60160000 0.11360000 -0.22047000 0.21883000 0.92270000 -0.41190000 1.71500000 3.40140000 3.19800000 -0.24204000 -0.24204000 0.02286500 0.00907500 0.03340800 -0.03204100 0.44206000 -0.82814000 0.11653000 -0.05104600 0.58901000 0.58901000 1.33620000 0.00000000 0.00000000 0.00000000 0.39662000 -0.44496000 -0.41871000 -0.36340000 0.13880000 -0.22047000 -0.21156000 0.04372300 0.05541500 0.92270000 -0.41190000 -0.41190000 -0.30181000 -0.30968000 -0.84947000 0.04797800 0.02468900 0.02468900 0.00722170 -0.24204000 -0.24204000 0.02286500 -0.00099537 0.02664000 0.02664000 -0.03204100 0.44206000 0.33157000 -0.34664000 0.08276100 -0.05104600 -0.82847000 -0.82700000 1.33620000 -0.35544000 0.00000000 0.00000000 0.39662000 0.07901500 -0.36963000 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 0.483 -0.334 0.509 1.336 -0.355 -0.355 0.000 0.000 -0.367 1.061 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 0.000 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 0.483 -0.334 0.509 1.336 -0.355 -0.355 0.000 0.000 -0.367 1.061 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 0.000 6.3107745 9.3361205 3.8885387 8.5800754 3.4926095 11.2986110 3.7682479 NA 9.4686868 5.5484644 NA 3.4926095 -0.7553565 9.9232853 9.7954319 0.2446435 4.1988791 8.3026768 8.5620978 13.3153092 9.0584664 7.2046866 8.2725911 NA 8.6348539 9.7963933 2.5666203 2.0520333 11.5612495 2.2446740 13.3692103 12.0819188 4.9451254 8.4345098 8.0648640 11.4168000 -0.7553565 1.2447044 NA 1.5666203 9.2190998 12.2601002 9.6876285 NA 8.1621169 10.3354591 9.6699011 4.8296466 10.5917527 NA 10.3047054 1.5666203 3.1515828 8.8183134 5.9445703 2.8296466 7.3215006 6.2219641 7.3995035 4.7365399 14.8150745 1.2447044 10.6229799 1.8296466 8.1575743 4.0520420 8.2305273 8.4020319 14.128552 5.221966 8.600036 13.399266 9.509128 11.663065 12.176531 11.251362 8.936429 9.220533 12.695510 8.404557 6.938172 10.043157 2.566620 7.877680 10.459004 10.4806993 4.7365399 7.4095921 8.9241652 9.3440329 8.7185127 6.5208088 4.9451254 10.9882573 8.0128692 NA 5.7992738 8.8612340 6.2670526 9.9911994 10.0560598 12.0237888 6.2890801 3.9451207 13.0434940 8.1694976 10.8083580 11.2628853 9.7143269 8.7485109 10.3047054 4.8296466 2.4146227 9.4369532 5.7682479 9.6530149 -0.7553565 10.2404522 8.3294936 8.1783755 14.5456096 9.6865917 9.9674926 11.2190997 10.9597891 9.9743059 0.2446435 TCGA-E9-A5FK 60 0 NA 812 breast stage iiic t2 n3 m0 female 2012 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 2 4 NA NA 3 4 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 9.47153642 8.04039110 10.65198304 5.13781498 9.06182830 9.00541515 8.84980165 9.45758691 10.55150467 10.41435470 11.21095602 9.99802043 1.07169403 12.82504567 2.87907837 9.93281135 8.54339960 8.02882660 8.11611831 12.38843022 1.65667941 13.47872659 4.68643329 10.83044319 10.20743376 7.18546618 -0.92823733 13.69516416 8.78425138 1.07169403 8.22654273 5.65668799 NA 5.41157539 8.85799405 9.23159585 9.14854014 10.16448160 8.51051615 9.88229609 5.44676241 10.98946944 14.31887315 5.10492788 10.10858483 9.65574733 9.21638259 4.35712969 3.24164191 7.51051654 10.54390752 NA 9.89986095 6.37550519 6.42045208 3.65669085 9.09686403 11.85226420 10.84032231 11.24508928 11.63372831 8.15653263 10.23600283 9.78080827 9.98685687 9.86370124 1.87907837 11.28422082 10.22527650 NA 10.36519604 8.59136077 0.07176267 4.74415033 11.00172253 9.28239579 9.94131821 8.94516844 4.95436849 10.40487982 12.84424521 12.81603272 9.70834901 9.57057355 -0.172080 0.400610 0.400610 -0.057250 -0.057250 -0.181130 0.076566 0.074408 0.074408 0.323980 0.323980 0.323980 -0.150160 -0.100790 0.060548 0.060548 0.060548 0.046559 0.046559 0.000000 0.101180 -0.053611 -0.047292 -0.047292 -0.047292 0.180410 0.180410 0.180410 0.121340 -0.068903 -0.172080 -0.050776 -0.057250 -0.181130 -0.080275 0.076066 0.076066 0.074408 0.074408 0.074408 0.072827 0.072827 0.323980 -0.075787 -0.075787 -0.075787 -0.070135 -0.100790 -0.100790 0.066086 0.060548 0.060548 0.060548 0.046559 0.046559 -0.080960 0.000000 0.019622 -0.053611 -0.082909 -0.047292 -0.047292 -0.067056 -0.221820 0.180410 0.121340 -0.015741 -0.170440 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 0.000 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 0.000 10.9386170 12.4083705 6.2811771 9.8982729 5.9297058 10.4494772 6.4726031 1.6566794 9.6118525 8.2664811 0.6567252 7.6529253 5.0940925 9.8887081 9.5635774 3.3936496 8.7599747 8.6011550 11.0087304 12.0607641 9.2409730 6.9109281 11.1585241 2.8790784 9.9635081 10.2378875 6.3663449 NA 11.1753401 3.2416419 14.0248296 12.6373026 8.6585643 9.3478488 10.5650796 10.3314678 2.5311444 1.3936359 NA 3.0717284 10.1841640 11.3530750 9.8399087 6.1697567 7.9753654 8.3891370 10.2664813 4.4292745 9.2664813 NA 10.8990671 2.5311444 4.2010065 9.8129976 6.0682258 7.2315956 10.4478498 8.9030316 10.2963291 -0.9282373 14.4174415 1.8790784 11.0331742 NA 8.4424119 6.0024618 7.5188073 9.1565329 11.7563766 5.9665412 7.7263605 12.8250457 10.2945193 10.9991321 12.3884302 10.7321661 8.7281494 9.8653278 12.8004953 10.0752423 7.5105165 8.7564729 0.6567252 7.0200921 9.7236731 10.7463581 5.4115754 8.0083625 7.9995023 6.0259213 9.4624738 9.4071148 8.1538737 11.2109560 7.6224714 -0.9282373 5.3385100 6.8888358 9.2048667 11.0958252 8.3053440 10.3605906 4.3196541 8.5208732 11.1738248 9.1485401 11.1445270 10.1906655 10.2811778 9.9054052 10.0331741 6.4026420 NA 10.2268715 8.8855057 9.8998609 4.8790784 10.9297054 9.0968640 7.3755052 14.3471215 10.6969767 10.6901099 12.1537071 10.6016429 8.8448636 3.2416419 TCGA-E9-A5FL 65 0 NA 24 breast stage iib t3 n0 m0 female 2012 NA no metaplastic carcinoma 0 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.219503e-06 3.81477e-07 8.1410838 8.0455516 9.7990013 5.9394499 9.2809865 8.9280152 7.5741659 10.5091458 9.6020155 13.4869941 9.1509544 10.2221240 NA 11.8300504 2.3696061 9.8970716 8.4194432 8.5911816 8.8187432 10.0587190 0.9545686 11.3766218 6.0420205 10.5869464 11.0859853 6.7094450 2.3696061 8.3265225 10.6971472 4.4988763 6.7094450 8.1110616 NA 5.0700329 7.0769534 9.7468050 9.0752270 9.1144285 8.1993170 8.9639191 1.3696061 5.9989514 13.9721774 5.3557775 9.4302905 9.2507084 10.3575690 3.8290275 1.3696061 8.9806194 12.6538403 4.2764818 10.8818412 5.5790474 4.4988763 4.4570558 9.9164890 11.3143066 10.1311457 10.8956047 12.7220518 7.8534100 9.5129778 8.3891852 10.0812615 10.3121090 1.1393385 11.2376454 9.0025897 NA 10.4590450 9.2598588 3.7619129 3.6915230 11.4878867 10.2384170 9.8980487 9.1865781 2.9545500 5.6733755 13.4307125 12.1682688 8.4139888 9.9573720 0.071248 0.071248 0.071248 -0.091170 0.500970 -0.265400 0.462120 -0.076012 -0.076012 -0.093667 -0.093667 0.854420 -0.014916 -0.014916 0.202440 0.202440 0.202440 0.011818 0.095653 0.684210 0.107600 0.077286 0.219670 0.233800 0.472720 0.106870 0.106870 0.106870 0.132580 0.071248 0.071248 -0.266850 -0.047531 -0.278300 -0.265400 0.448670 -0.274280 -0.076012 -0.076012 0.537490 -0.274040 -0.055499 0.292940 -0.210690 0.000000 0.000000 0.000000 -0.014916 -0.014916 0.202440 0.202440 -0.281200 -0.281200 0.011818 0.095653 0.095653 0.444770 0.107600 -0.227410 0.234390 -0.278340 -0.286200 -0.463230 0.106870 0.106870 0.132580 -0.123300 -0.282630 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.438 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.438 7.9318367 13.0375931 5.9989514 10.0071251 NA 10.3940416 2.9545500 6.3468736 9.1801663 8.9583091 3.6175218 8.0529750 6.0134511 11.5640436 9.6222600 4.3237880 8.1211387 9.8644500 7.2704617 11.1144284 9.0813476 6.0420205 11.0030439 0.3696061 6.4781192 10.1410840 3.8290275 NA 11.5701867 2.8290174 13.0404720 13.3650967 7.5935965 8.8654497 9.9193793 11.4794252 4.5790474 1.3696061 0.3696061 7.1311460 9.1945532 11.5304114 7.6824778 6.5495044 8.0585790 9.8412698 9.6198929 4.7271472 10.0829810 NA 10.7656641 2.5395311 4.7958604 9.5288731 6.5659261 0.3696061 8.3062326 7.7094444 2.1769610 7.6733755 14.3058644 0.9545686 11.3113758 NA 10.5881578 4.4570558 6.8290263 7.8931565 10.937940 8.753299 7.824922 11.830050 11.293293 10.989356 10.058719 10.826462 8.748973 9.824922 12.650510 10.711113 8.980619 8.774736 2.369606 8.094108 8.822865 11.3292343 3.0700286 9.0098395 8.9787734 7.2461116 9.0678476 8.9222636 9.7619120 9.1509544 5.5790474 8.3525882 4.6915230 8.8472920 11.2851005 9.7619120 8.5244128 12.9139553 5.5193406 5.0700329 11.7469569 9.0752270 10.6175220 10.5851275 10.2613783 10.6596134 10.4444050 5.8290250 8.2491779 9.6874593 6.7789852 10.8818412 6.7359161 11.7274214 9.9164890 7.6733755 14.0194682 11.2095856 10.8808530 11.6541295 11.0116462 9.4194430 0.3696061 TCGA-E9-A5UO 41 0 NA 785 breast stage iia t2 n0 m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.0850629 9.2594483 11.7842570 8.7311938 8.9151378 8.7797476 10.9259644 9.3724320 9.5040113 14.3483802 7.8985959 10.4787969 0.2380531 13.6072849 2.4604018 9.8065952 5.8229672 7.8027903 9.1267489 13.2567853 1.4603756 13.8961799 NA 9.5164163 10.8869623 7.8527155 -0.3470317 9.1408832 7.8229678 1.4603756 7.6388848 6.6974375 NA 3.1766100 8.7693870 8.6656678 9.8192063 8.5001005 8.7298586 10.9811570 -1.3470317 9.7938728 13.5507468 8.7120224 10.7893934 10.2973501 11.2517935 3.8625010 7.3076790 8.5417862 10.7022110 NA 10.9884335 0.6530600 2.1124666 1.4603756 9.7305265 11.2548139 10.1844246 11.6274577 12.2374185 8.8002480 10.5599337 10.3440451 10.7123875 10.5287924 4.4859355 11.2728046 11.8868125 -0.3470317 10.2663722 8.7861853 3.8452391 2.5599323 9.0259081 9.0061900 10.7938729 9.1378659 -1.3470317 9.7130634 8.7537055 9.9625195 9.7615675 9.3629886 0.0135070 0.0135070 0.0548030 -0.0205490 0.0519560 0.0390650 0.0384890 1.0170000 -0.9628700 0.0246890 0.0246890 0.0246890 -0.0213970 -0.0190090 -0.9811100 -0.0189020 -0.0189020 -1.0288000 1.0226000 -1.0155000 -0.0161540 0.9953000 2.8484000 0.8866600 0.8866600 -0.1336800 -0.1336800 -0.1409100 -0.0661180 -0.0927100 0.0135070 -0.0557830 -0.0205490 -0.0702690 0.0495400 0.0384890 0.0384890 -1.0120000 -0.9628700 -0.9628700 0.0097905 0.0101460 0.0246890 -0.9374700 -0.9374700 -0.9649500 -0.0269880 -0.0190090 -0.0792100 -0.9811100 -0.0189020 -0.9795900 -1.0062000 -0.9507900 0.0231450 0.9890800 -0.9430600 -0.0161540 1.0024000 -0.0540160 -1.0512000 0.8866600 0.0069435 -0.1336800 -0.1409100 -0.0095426 -0.0124380 -1.0562000 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 -0.172 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 -0.172 6.6014098 10.5433074 6.5234083 7.7484404 1.1940871 11.8722116 1.2379919 NA 9.3690051 6.1528892 NA 5.1887847 -1.3470317 10.0902751 9.6108707 1.8229748 2.1124666 10.1252262 9.8416320 11.4064688 10.5348453 7.3465297 12.0481756 1.6530600 11.3558651 9.5926224 -0.3470317 2.4604018 11.4164630 1.2379919 11.1905042 12.6093285 6.0793077 8.9139626 8.8527155 9.4417615 2.9009730 3.1124666 0.9749698 1.9749698 9.8728166 10.3513137 10.3214850 2.2379919 11.0865529 9.2057121 9.6802581 4.9749698 10.2271636 NA 7.5079112 -0.3470317 12.3584595 9.3584767 8.0334610 NA 8.6628716 5.2677530 12.9077765 NA 13.2022261 -1.3470317 11.3543496 NA 7.2380053 5.3254692 7.7848998 8.1980074 13.581540 6.589681 9.174644 13.607285 9.075781 10.067200 13.256785 12.029033 9.220999 9.537214 12.287627 7.758951 8.541786 8.360402 2.353493 7.874630 11.567054 10.5478609 6.1206485 8.4195722 9.8728166 10.0248197 10.0454411 4.3254656 2.9009730 7.8985959 7.5748841 1.8229748 5.9476638 9.4079473 11.4185364 9.6173839 8.6130450 9.3869058 10.0650837 -1.3470317 9.7654761 9.8192063 10.7490994 10.5565484 9.9482380 8.5984869 10.5051824 7.9453648 NA 8.6194189 NA 10.9884335 3.6072356 11.0089447 9.7305265 7.3289998 12.7697120 10.1672640 9.1438939 12.3479451 10.1378659 10.2389446 0.9749698 TCGA-E9-A5UP 63 0 NA 803 breast stage iia t2 n0 m0 female 2012 NA yes other specify 0 white not hispanic or latino NA NA 1 3 NA NA 1 1 3 3 3 1 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 10.9387411 9.2197639 10.9337425 8.2110409 9.4062356 8.9402082 9.1973659 7.6328673 11.1828167 13.0158241 10.7053977 9.9045842 1.6757708 14.7168256 4.1351983 9.5251706 4.6299627 8.1020303 11.1387788 12.6633847 2.1352065 14.8988621 6.4959445 9.4995069 10.8047264 6.5584085 NA 10.9248789 10.6016907 NA 8.6429918 6.2226597 -1.3240938 -0.3242744 9.4447768 9.7002125 9.4028349 10.3060325 9.4887450 10.6325046 2.5826523 10.8559854 14.6174550 7.7237620 9.1646098 10.3200724 11.7803642 4.7842893 -0.3242744 8.4927489 9.8146771 NA 9.9009729 2.6757708 4.5337440 5.4571247 9.0311164 11.0975673 10.2936920 12.4195480 12.2681057 9.5102364 10.8562963 10.5690669 10.6817408 9.9396215 4.4306533 12.5627004 12.2637773 0.2607483 10.8425562 9.4579447 3.5855395 4.5337440 9.9266560 9.6364914 11.2784643 10.2635429 NA 9.7678618 12.6874295 10.0105973 9.0518908 8.6771735 0.51333 1.75200 1.77300 0.21192 0.21192 0.21253 0.21729 -0.31096 -0.31096 1.84060 0.21960 1.81700 0.20964 0.21099 -0.30534 -0.30534 -0.30534 -0.30240 -0.30748 -0.30028 0.17317 -0.30533 -0.84115 1.77740 1.80450 0.16820 0.16820 0.16820 0.90734 -0.82269 -0.80352 -0.28778 0.21192 0.22502 0.21253 0.22083 0.22083 -0.31096 -0.31096 -0.31096 -0.31004 -0.30850 -0.84155 -0.30440 -0.30440 -0.30440 -0.30478 0.21099 0.23488 -0.30534 -0.30534 -0.30534 -0.30534 -0.30240 -0.30748 -0.30748 -0.30028 0.17317 -0.29579 -0.84235 -0.84115 1.77740 0.22360 0.16820 0.16820 0.18995 0.20717 0.19786 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.824 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 0.000 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.824 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 0.000 5.7418552 11.1028164 0.6757256 10.2517773 2.5826523 10.3205230 -0.3242744 NA 8.2303543 8.2531942 NA 3.7201581 7.1555459 10.0145018 9.7525810 2.1352065 2.2607182 8.5568792 6.9518896 12.1560508 9.6621124 7.6530457 9.1290362 2.2607182 10.7347718 10.0723702 3.5337502 NA 12.2241057 2.4831321 11.9126765 11.4337804 4.8050499 9.7869011 9.5645087 9.9111813 2.9976898 2.7632203 0.2607483 4.2904760 9.0529761 9.8056925 9.6050239 NA 9.0074103 9.0915073 10.2274737 8.2886340 10.0915072 NA 10.2375307 -1.3240938 4.0333173 8.8234029 7.1298589 NA 7.5856589 5.9611672 4.3481899 1.9976898 12.6927478 0.6757256 10.3552456 -0.3242744 5.5337471 1.9976898 7.5337463 9.1845506 13.468739 5.390011 9.123882 14.716826 9.445603 11.076111 12.663385 11.897504 8.391727 9.810833 13.269857 10.671179 8.492749 8.044272 -1.324094 7.899767 12.035103 10.8194675 6.8997666 8.5781406 8.5976064 8.0893933 9.9709833 5.0851569 6.9518896 10.7053977 5.9331524 -1.3240938 6.7632283 6.5176127 10.1316063 10.8631175 9.1362214 8.7485679 12.4204942 2.5826523 11.2731336 9.4028349 10.9443074 10.1575648 11.4153351 9.7816740 10.3968646 8.1934347 NA 9.0069622 -0.3242744 9.9009729 3.3196179 10.4774737 9.0311164 6.9189395 11.9270999 9.0627057 9.9784043 13.5729491 10.6494628 10.2583779 0.2607483 TCGA-E9-A6HE 45 0 NA 847 breast stage iiic t3 n3 mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 3 3 NA NA 1 4 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0662047 8.0050732 10.7629883 5.7869805 8.8590393 8.1697251 9.5871621 9.0464630 10.5400122 7.5088398 11.6456529 9.7744031 NA 13.5321419 2.0764907 10.2391080 7.2788341 7.7333998 8.4781431 11.7481092 1.4243847 13.3202568 6.1008726 10.0516583 9.6191679 6.0764885 0.2020102 10.0672364 11.1074056 -0.3828896 8.7320999 5.8554615 -1.3830778 2.6170633 8.5668829 9.3660874 8.9746082 9.3407171 8.8756222 9.6614503 3.3174922 10.9185523 14.3439129 5.0313599 10.2815034 7.4308372 9.6303787 4.3984188 0.6170163 7.5477937 10.5069403 0.2020102 9.3526122 6.8554603 5.1406192 5.0093740 8.4356382 11.6465159 11.2676592 12.5161298 12.0267122 9.8637968 10.9202661 10.2368176 10.1869118 9.5065601 1.6170633 12.2811700 12.0944349 -1.3830778 10.3325892 7.8068808 1.9390008 4.0093740 9.1735622 8.4609772 9.5993368 8.0846617 3.4750330 9.5485324 14.3550692 13.5916500 9.4897310 10.1940128 0.84534000 1.17540000 1.20340000 -0.00387790 -0.00387790 0.00010444 0.00750000 -0.00636680 -0.01367700 0.00332990 0.00332990 0.00332990 0.00652620 0.00889200 -0.61076000 0.01950300 0.01950300 0.00000000 0.00000000 -0.63349000 0.00847430 -0.01562900 -0.61114000 0.00905970 0.00905970 0.00360760 0.00360760 0.00360760 0.02188400 0.01028500 -0.00138580 0.00124810 -0.00387790 0.02553100 0.00010444 0.00750000 0.00319100 -0.00636680 -0.01367700 -0.00968060 -0.00401620 -0.00401620 0.00332990 -0.04261700 -0.04261700 -0.04102400 -0.04102400 -0.93622000 0.01950300 0.01768400 0.01950300 -0.61345000 -0.61345000 0.00000000 0.00000000 0.00000000 -0.60941000 0.00847430 -0.01711600 -0.63759000 -0.62236000 0.00905970 0.42132000 0.00360760 0.00360760 0.02045900 0.01042400 -0.62484000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8068808 14.3332057 7.4499459 10.1702054 1.0500489 10.7327501 2.6170633 0.2020102 9.5336821 7.7794475 -0.3828896 7.4499459 6.2681087 10.5518527 9.3526122 4.2317626 7.1639505 8.5828405 11.4181582 12.5799521 9.1008820 6.0349090 10.5624999 2.0764907 8.0454162 9.7668032 4.9208364 NA 11.1571841 0.2020102 12.8157314 12.4496495 7.3381552 9.0190021 10.4114720 10.5824797 2.9389820 1.4243847 0.6170163 7.0264471 9.7405310 11.3122844 8.9646776 5.4625464 7.6732334 9.5050382 9.8155011 5.9389844 9.8246807 0.6170163 10.0790471 -1.3830778 3.5712521 9.7663270 7.1390100 0.9390008 8.8649837 8.1228678 6.3918433 -0.3828896 14.1849528 1.2020102 10.8255953 NA 7.7769278 3.9746119 7.8649834 8.8685386 13.073991 6.920836 8.142577 13.532142 9.097846 11.588240 11.748109 10.383171 8.964700 9.809349 13.691239 10.117898 7.547794 11.193304 2.076491 6.907075 9.582119 10.5156576 6.4372344 9.3635704 8.8920166 8.4467789 9.5421209 6.6226800 6.6559757 11.6456529 9.0866981 0.9390008 7.4244107 7.7852269 9.6824723 9.4420148 8.1268309 10.5008450 6.1869125 5.1248492 11.8898142 8.9746082 10.6018306 10.2331455 9.7444057 9.5603036 9.7769274 6.2020180 7.5683407 9.2911514 4.0433183 9.3526122 6.2965363 10.0625883 8.4356382 7.3984162 14.2184207 10.6142356 9.2290031 12.5593873 11.3349467 8.8228493 1.2020102 TCGA-EW-A1IW 80 0 NA 371 breast stage iib t2 n1a mx female 2010 NA no infiltrating lobular carcinoma 2 white hispanic or latino NA NA 1 2 NA NA 3 4 2 4 4 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 7.976338e-07 10.4770021 9.8115452 11.5347556 9.7551722 8.8691746 8.8202942 9.2858976 9.7651752 10.1550740 11.6325005 11.8682257 10.6761681 5.6984074 16.7801314 3.9865293 9.8967349 6.2213068 8.7404976 9.9634166 13.3140455 5.0827452 13.9584715 6.9927367 9.1248053 10.8102283 4.8427979 -1.8714426 8.3084596 12.4598174 2.4504855 8.7687954 7.7450995 0.9359123 3.7724030 10.2334768 11.1865423 9.6633398 11.3469625 10.4314750 11.5773122 -1.8714426 10.5184508 14.8680543 7.9176764 9.1912715 10.9493279 10.8168009 5.9099099 4.8427979 9.1817978 11.6416613 -1.8714426 11.7125735 5.6907942 5.8359089 4.8150528 10.3912327 11.9281358 10.0684971 11.7391141 13.0223261 8.3976772 11.3177574 10.9749675 12.0516923 10.3779603 5.0474119 11.5565181 12.0806548 0.7135199 10.3322044 9.1932932 3.0185096 4.6984074 10.3437802 9.8049485 9.8733844 10.1467508 3.7432564 10.2416416 13.5732096 12.6200279 10.3926999 9.1136810 -0.55677000 0.52485000 0.53467000 0.00027728 -0.00609040 -0.01917700 0.00208050 0.00124810 -0.01259300 0.00610900 0.00610900 0.00610900 0.01028500 0.01028500 -0.54310000 1.53670000 -0.54915000 -0.00221680 -0.00221680 -0.56113000 0.00791750 0.01474900 -0.47986000 3.65690000 0.01028500 -0.01436600 -0.56087000 -0.01656700 0.02426800 -0.54573000 -0.55677000 -0.01188700 0.00027728 -0.01917700 -0.04915400 0.00208050 0.00208050 0.03157700 0.00000000 0.00166420 -0.01925300 0.00000000 0.00610900 0.01335300 0.01335300 0.01335300 0.00555290 0.01028500 0.01028500 0.01474900 -0.66596000 -0.54915000 -0.54915000 -0.00221680 -0.00221680 -0.00221680 -0.54310000 0.00791750 0.01474900 -0.54219000 -0.55377000 -0.00981850 -0.15338000 -0.01436600 -0.01656700 0.02426800 -0.15439000 0.02454800 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.514 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.514 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8759044 12.9013291 8.8071507 9.7764587 3.7314331 10.6778540 4.3764779 0.7135199 8.7368054 8.7003031 -0.8714426 8.6530923 3.8009724 10.5171061 9.3639665 2.7724136 9.1817978 9.7083380 11.7851989 10.2396862 9.5553553 7.8649525 10.8723331 2.8289971 9.5122549 10.1260829 4.4139528 NA 10.4541371 3.2160202 12.4959653 11.4749258 8.4011803 10.2903123 8.4391635 9.5542911 4.1946387 1.1285574 -0.2864801 10.5843915 8.2040297 8.2331494 10.7256720 5.3953371 7.7594914 7.4116389 10.0972174 6.0769182 9.8333188 -1.8714426 10.4371740 2.8834449 4.8967368 9.6971386 6.5160940 4.1946387 9.7538027 7.7021976 5.6442514 2.0354480 13.1123013 0.7135199 10.0142469 NA 7.8666428 5.4684009 8.4728464 8.9606496 14.122470 5.961440 8.691747 16.780131 9.310324 10.862625 13.314046 10.974041 8.516848 11.031868 13.661941 11.162146 9.181798 8.612367 1.298482 7.888439 11.531829 11.390058 6.977173 8.539002 8.641291 9.916861 10.839604 6.533693 5.870017 11.868226 6.145360 2.450485 7.136979 7.591482 11.769925 10.286213 8.974824 8.716328 12.403948 6.071065 12.217034 9.663340 10.303476 9.437458 11.776571 9.607826 10.408741 8.943133 7.514413 8.572509 6.059288 11.712574 6.366955 10.832454 10.391233 6.797436 13.062057 9.678335 10.026396 12.819749 10.826387 9.377071 2.376485 TCGA-EW-A1IX 48 0 NA 1208 breast stage iia t1b n1a mx female 2008 NA no other specify 1 asian hispanic or latino NA NA 2 3 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 6.935946e-08 10.9258333 10.2968882 12.2935244 10.1020215 8.0664939 9.2838093 10.9963261 9.8665096 10.1846973 14.1679744 11.6141890 10.8967535 1.7207162 13.4393469 3.3056787 10.2778634 5.1357565 8.6087856 10.4437161 12.9524734 1.3581712 14.2406281 6.6852197 9.6278032 10.6694106 9.1168479 -1.4492963 11.7909517 9.7213450 2.3581430 8.4621857 7.4785723 -1.4492963 5.2787133 10.3243453 9.9511397 10.3741612 11.8931464 10.3593559 11.7862098 10.7519989 11.1844703 14.7831211 8.7723809 10.1520958 11.9559354 11.6935392 5.6903445 4.8727204 9.3305134 11.6224238 0.5508022 11.1765027 6.7602476 6.3386972 5.0426487 10.5637675 11.6276095 10.4482612 12.6728939 12.9209364 8.5064437 11.0211985 10.8395908 11.4599369 11.6246007 5.2922590 11.2083356 10.2624609 -1.4492963 10.4326726 8.9366562 3.8373075 5.5049890 10.5560675 10.0194180 10.3496707 9.8298240 4.3056787 10.1955515 13.7347781 12.0562333 10.1824256 9.9548710 2.7357e-02 2.7357e-02 4.9256e-02 2.9133e-03 1.5255e-03 -1.5601e-03 -1.6704e-02 1.8030e-03 -5.1846e-01 1.9269e+00 -8.3160e-04 -9.6269e-03 -1.3318e-03 -8.3160e-04 -1.5151e-03 -1.5151e-03 -1.5151e-03 -1.9969e-03 -1.9969e-03 8.7877e-04 3.3809e-03 7.3532e-05 6.9327e-04 6.9327e-04 6.9327e-04 9.3098e-03 -1.1550e-03 -1.1617e-03 3.1910e-03 -1.3862e-04 2.7357e-02 -4.1546e-03 2.9133e-03 -5.2788e-01 2.6357e-03 -1.6704e-02 -2.5346e-02 5.4139e-03 -5.1846e-01 -5.2634e-01 0.0000e+00 -1.9399e-03 -5.2297e-01 1.5255e-03 1.5255e-03 1.5255e-03 1.5255e-03 -8.3160e-04 -8.3160e-04 5.9700e-03 -1.5151e-03 6.9327e-04 6.9327e-04 -1.9969e-03 -1.9969e-03 -1.9969e-03 -1.8014e-03 3.3809e-03 4.5800e-03 4.9969e-03 6.9327e-04 6.9327e-04 8.3195e-04 9.3098e-03 -1.1550e-03 3.1910e-03 2.6357e-03 -5.1948e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 9.7927771 13.9936078 10.4625603 10.8004999 4.7987193 10.8149432 2.7207162 NA 8.3106823 8.4118808 NA 7.8948681 3.7207162 9.6948147 9.6428903 3.1357483 9.6382567 9.1149435 10.1068208 10.0401401 9.0416047 8.4651790 10.6820078 4.8361968 9.8597017 9.8494293 3.7602422 -1.4492963 10.5574706 2.8727303 12.5674281 11.9003516 8.0224694 10.2829613 7.8081817 9.0605689 3.6382592 0.8727106 NA 3.9083422 8.7951578 9.3962839 9.8704660 4.4334402 8.3739061 6.7005410 10.3006634 7.0020049 9.5807713 NA 11.8225487 6.5676017 4.2232217 9.5261618 6.3882963 4.9937378 9.6461909 8.5078961 6.6435517 -1.4492963 13.4040547 -1.4492963 10.8428279 -1.4492963 8.6813646 5.9686461 7.8105369 9.6289447 13.8983544 4.8727204 8.7927770 13.4393469 10.4486394 9.5876543 12.9524734 12.9197777 9.3470200 11.1659637 13.1157174 10.2293941 9.3305134 8.8715945 0.1357975 7.1946505 11.1634321 11.521439 6.784414 8.773589 9.341142 7.879469 10.962069 7.550794 8.619572 11.614189 7.510796 5.659320 6.504991 6.739284 11.092858 10.732257 8.585277 8.914929 12.583615 6.868206 11.674191 10.374161 10.261170 9.785611 10.701493 10.049643 10.819921 9.624266 NA 10.093782 6.433437 11.176503 8.546561 10.820920 10.563768 7.530934 13.833231 10.108736 10.274881 12.807961 11.104903 9.913286 1.720716 TCGA-EW-A1IY 38 0 NA 258 breast stage i t1c n0 mx female 2009 NA no infiltrating ductal carcinoma 0 asian not hispanic or latino NA NA 2 6 NA NA 1 4 4 4 1 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 10.8651353 10.4329723 11.5239820 10.0016465 8.7736839 9.6320817 9.5033758 10.7518936 9.5366445 13.1607205 11.5093931 10.4838928 8.0664843 11.0099617 3.0815953 8.7652878 6.4461636 8.6341326 9.9634191 12.8182752 4.1054350 13.4091440 6.3694578 9.5095328 10.4858814 6.6943370 -0.8252101 8.8377251 11.3575606 -0.2404180 7.5189969 8.4190648 NA 4.1747020 10.4338556 11.2008784 10.1347028 11.5325277 10.6134926 10.8904483 11.6097199 10.7743812 14.1152438 7.7470409 8.6685564 11.1489361 11.8580244 4.0573463 0.1746621 9.1935963 12.5394510 -0.8252101 11.9076101 5.5056179 8.3926583 4.3244506 11.2387698 11.9857744 10.3679181 13.1510411 13.4058469 8.2648132 11.2478382 10.9285589 11.9529833 10.5570546 4.5497431 13.2498456 11.1532325 0.7596672 9.6854649 9.8302316 4.3070715 6.0201910 10.9880811 10.9884820 9.6009655 10.4598140 0.9820718 6.0634447 14.1769444 12.7130110 9.8699291 9.2681183 -0.0103610 0.8176800 0.8152300 -0.0117400 -0.0085677 -0.0084297 0.3117800 -0.0111890 -0.0162830 0.3004300 0.3004300 0.3004300 -0.0059433 -0.0059433 -0.0176470 -0.0104990 -0.0104990 -0.0013769 -0.0027618 -0.0122910 0.3159500 0.3061800 0.0000000 0.0000000 0.0000000 0.0089009 0.0089009 0.0089009 0.3863800 -0.0103610 -0.0103610 0.2774300 -0.0090958 -0.0084297 -0.0121730 0.3032300 0.3032300 -0.0111890 -0.0111890 -0.0162830 0.3976300 -0.3699600 0.3119400 0.3053000 0.3053000 0.3053000 0.3246400 -0.0059433 -0.0140810 -0.0116020 -0.0104990 -0.0104990 -0.0104990 -0.0013769 -0.0027618 -0.0095696 -0.0122910 0.3049000 0.3092200 -0.4700300 0.0000000 0.0000000 -0.0030386 0.0089009 0.0089009 0.3863800 -0.0071869 0.0048668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.386 0.386 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.394 0.394 0.300 0.300 0.305 0.305 0.133 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.386 0.386 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.394 0.394 0.300 0.300 0.305 0.305 0.133 0.133 9.6372030 12.8896439 5.6093295 9.3719175 4.7601145 9.5739787 2.4226367 -0.8252101 7.5798424 9.0107510 -0.8252101 9.1401316 -0.2404180 10.8979351 8.8550603 0.7596672 9.9333404 9.9266632 10.9308401 8.3219056 9.5045195 7.7838796 10.1862774 2.9295827 7.2910445 9.3471284 5.1519806 NA 9.2067465 3.6982629 12.3610472 12.2132769 9.3187218 10.6602785 9.4595249 8.9337567 4.0573463 2.6341286 -1.8252101 10.3026951 7.0012494 5.3345719 10.6238494 4.5322546 7.5319888 4.2190911 10.0036306 5.6504343 9.3884126 -1.8252101 12.1341594 3.6665521 6.1690551 10.1649821 5.9141435 6.4875844 9.5295010 7.8185573 6.4035200 NA 13.2429332 -0.2404180 8.7321644 NA 8.8471263 5.3446261 8.6775326 8.7492942 12.864417 5.759665 9.138319 11.009962 10.117948 11.357561 12.818275 12.376212 9.562718 10.704375 13.938510 9.238770 9.193596 7.912793 1.634129 7.757783 11.581437 10.716523 7.518997 9.657005 8.355853 9.184530 9.784097 6.013904 7.776472 11.509393 7.216360 2.818564 4.956061 7.368670 11.659146 10.741468 8.166223 5.832913 11.757901 7.262163 12.038752 10.134703 11.128170 9.745031 11.214305 9.059634 10.808831 9.162675 1.174726 8.694612 7.988482 11.907610 7.990084 10.608808 11.238770 7.180325 13.411014 10.561641 11.269933 12.954215 9.523982 9.640267 3.789406 TCGA-EW-A1IZ 53 0 NA 554 breast stage iiia t2 n2a mx female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 2 4 NA NA 1 4 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.727868e-06 2.774378e-06 10.0398774 9.2958628 11.0099774 8.1449498 8.6384486 9.2357419 9.8363084 10.1649688 11.3338784 10.4462456 10.9284475 10.3192268 0.3591838 12.7669352 2.5816164 9.2840373 5.7966289 8.9150921 8.6826551 12.2178535 -1.2256662 13.5295672 4.6569082 10.1419665 10.6626251 7.4431474 2.2337040 13.3665156 9.5662392 1.7742494 8.1857734 6.5751625 NA 6.3963136 9.5241319 9.8867018 9.8755815 10.3699860 9.3880517 10.4528625 10.8028591 10.2666163 14.7001413 5.8260705 10.9702496 11.0814631 10.3134211 4.9035445 7.3778890 7.8670192 10.0334171 NA 10.3713837 6.1493021 8.1427688 4.2005279 10.3095377 11.8099206 10.4576957 10.4533025 12.5002676 8.0363572 11.6561410 10.0411952 10.9205128 10.4167653 3.1665869 11.1517440 11.2623535 0.3591838 10.2290757 8.6901419 2.6830676 6.0030805 10.9186019 9.5621649 9.8996758 9.2899622 2.8617172 7.7686157 12.1730060 11.7447278 9.4145072 9.5637959 0.00499690 0.00499690 0.00499690 -0.08757900 0.00124810 -0.00119100 0.00000000 0.00661330 -0.02126100 -0.00238410 -0.00238410 0.00610900 0.00319100 0.00319100 -0.00027724 -0.00027724 -0.00110480 -0.00110870 -0.00110870 -0.00774820 -0.27070000 0.01084200 -0.00027724 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.01195800 0.00499690 0.00499690 -0.00083160 -0.25769000 0.00597000 -0.00119100 0.00000000 0.00000000 0.00661330 -0.02126100 -0.01601700 0.00402430 0.00031548 -0.00238410 0.00583090 0.00583090 0.00583090 0.00583090 0.00319100 0.00319100 -0.00027724 -0.00027724 -0.00110480 -0.00110480 -0.00110870 -0.00677770 -0.00677770 -0.02516200 -0.27174000 0.01084200 -0.27117000 -0.00027724 -0.00027724 -0.28442000 0.00249690 0.00249690 0.01195800 0.00027728 0.00676950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.4185694 11.3071053 0.7742494 8.6260112 7.2938983 10.8021683 5.8932044 -1.2256662 8.9653217 7.5021826 NA 6.1405844 2.5816164 10.9812766 9.7458059 2.5816164 9.0186261 8.8254711 9.1296135 10.9717862 9.6082593 6.7966302 10.4342582 2.0773114 6.9290808 10.0590865 4.2661119 -0.2256662 11.0677340 2.4746956 12.9904777 12.6145485 7.6384482 9.9112534 8.8617253 9.8597348 1.7742494 3.0221902 -1.2256662 3.5816164 9.2036691 10.8237706 10.8261510 3.9035493 7.9091508 8.0757583 10.7436488 7.1274094 9.6705948 NA 9.4747021 4.2661119 3.2336887 9.5255386 6.3293120 8.8497416 9.5832265 8.9353943 12.1959328 NA 13.8120238 2.2337040 10.3331613 NA 8.1340119 4.5816164 7.7515421 9.0837386 12.528183 6.681153 8.967788 12.766935 10.330289 10.383441 12.217853 10.401340 8.871412 10.238808 12.784266 10.223927 7.867019 7.998264 2.774270 7.545752 10.503883 10.436931 3.903549 8.745806 9.166580 8.112397 10.321605 8.966555 8.836309 10.928448 8.792463 2.359212 7.385287 7.234841 9.859735 11.060531 6.840351 10.556851 9.264110 8.913814 12.433916 9.875582 10.315359 10.159586 10.904189 10.206804 10.365317 8.231643 9.192115 9.740566 9.843041 10.371384 3.297822 11.494507 10.309538 7.539267 13.853914 11.110769 10.799402 11.692753 11.198691 8.908689 4.861727 TCGA-EW-A1J1 38 0 NA 575 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 4 1 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.427581e-07 10.1744243 10.0009904 12.2327091 9.4008165 8.3556088 8.3626571 12.1106535 9.6248707 7.5886607 14.2636766 12.1741239 10.6048002 -0.6402540 12.8590026 3.6077682 9.3605460 6.4419913 7.4839633 9.9004543 13.4142766 4.2905792 14.2265895 2.0602895 9.2596065 11.4135980 10.2185999 1.9448210 11.7625355 8.8824233 -1.6402540 8.0602814 6.2787059 NA 4.6636236 10.7190423 9.8730760 9.5228624 11.7588527 10.0762327 11.9011805 NA 12.7061478 13.8501600 9.0260215 10.8388642 9.4929840 10.3853275 5.2178240 5.1411998 9.2447755 10.3717679 NA 11.4112207 8.5372615 6.7692322 4.6266260 10.9834947 12.3043709 9.4519383 12.9797752 13.0984619 6.6681815 10.3773462 9.9724431 11.5353914 10.6533135 5.9448046 13.0040361 11.8313901 NA 10.0193918 9.2386591 2.8218939 5.7861075 10.2135412 10.8061498 10.7753196 10.1887717 0.9447835 8.4083289 12.0084241 10.4433212 10.2493458 9.6330546 0.0035411 0.0035411 0.0035411 0.0305240 0.0299610 -0.7984000 0.0209760 -0.3936900 -0.3936900 0.1314700 0.1314700 0.1231100 0.0071551 0.0071551 0.4030300 0.3676400 -0.4006900 -0.0248640 -0.0248640 0.0194360 0.0106770 0.0025692 -0.8104200 -0.0174570 0.6446000 -0.0334700 -0.0334700 -0.0334700 -0.0147070 -0.8225600 0.0035411 -0.3806100 -0.8086900 -0.8147800 -0.7984000 -0.8276900 0.0234990 -0.3936900 -0.3936900 -0.3936900 0.0194360 0.0194360 0.1314700 0.3987000 0.3987000 0.3987000 0.3983700 0.0071551 0.0071551 -0.4056700 0.3676400 -0.4006900 -0.4006900 -0.0248640 -0.0354650 -0.0354650 0.0000000 0.0079900 -0.0067093 -0.8283400 -0.8104200 -0.7844100 -0.8097600 -0.7818800 -0.0334700 -0.0147070 0.0213960 -0.8011500 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.789 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 -0.201 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.789 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 -0.201 8.7671095 11.8694932 9.1354520 8.5558292 5.1280253 11.4026982 3.5692966 NA 8.0585465 7.1768254 NA 6.9214351 -1.6402540 10.1088732 9.4539196 0.9447835 7.4313045 9.3082091 11.7528300 8.3905091 8.9527939 9.2501060 10.1887717 2.6817641 7.9763906 9.4871915 2.7521491 -0.6402540 9.6653336 3.4042356 12.7447605 11.8788638 7.2516254 10.2248018 8.8546973 8.9249440 2.8834058 0.9447835 -0.6402540 0.6817641 9.0740874 9.2712338 10.2835408 0.9447835 10.5677225 6.3371223 9.7294392 4.7521598 9.8228552 NA 11.3113087 3.1147335 6.6266290 9.9935454 7.1640048 5.5595132 8.5159249 8.0928570 8.5146600 -1.6402540 14.0010187 1.1671652 10.2701098 NA 7.7882022 4.6996904 8.0689255 7.6952325 14.741783 4.529765 7.806925 12.859003 10.988287 9.574768 13.414277 13.787122 8.979145 10.985322 12.580296 10.851194 9.244776 8.738137 2.529771 8.358432 11.893780 10.9660157 6.9448046 9.3738624 9.3342565 7.6547384 11.0651740 7.2332860 7.7607213 12.1741239 4.7348830 0.9447835 3.6817753 6.5931267 11.2340548 10.7617880 8.3752567 9.5796154 11.4309690 7.0108939 12.8440020 9.5228624 11.2508660 10.1619543 13.7531317 8.8017484 11.1329810 10.1092923 NA 9.3654734 6.3654668 11.4112207 6.4042356 11.7894382 10.9834947 7.2053319 14.3638208 10.1824127 9.9814358 12.5052964 9.4968330 9.7687022 2.1671973 TCGA-EW-A1J2 50 0 NA 403 breast stage iib t1c n1mi mx female 2010 NA no infiltrating lobular carcinoma 1 black or african american not hispanic or latino NA NA 2 3 NA NA 3 3 2 4 4 3 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 10.9166904 10.2006842 11.9045530 10.1052540 8.6455759 9.4819685 10.3758324 9.8248173 9.8474063 10.6968879 11.3470588 10.4269849 1.9131096 13.6296594 3.6209500 9.9644252 7.0696302 9.0506293 9.5095640 12.8055167 5.0174632 13.5131624 7.2589005 9.1707273 10.6314873 8.4282999 NA 9.6305737 7.8812162 2.9131288 8.2765306 8.2974056 -1.9936661 4.7875944 10.2867159 10.4687374 10.1342294 11.6795441 10.6223244 11.8875403 5.6786607 11.4327619 14.7807004 8.5206925 10.0251307 11.6663424 11.9276112 5.3460846 5.2350530 9.6314872 12.2516392 -0.4088951 11.4198630 6.2205544 6.8485854 5.3008559 10.7142412 11.9216477 10.6668996 13.0854698 13.1834210 8.3681790 11.1485017 11.0215491 11.4718015 11.4327619 5.4819673 12.0994050 11.8194150 -1.9936661 10.2467282 9.1277687 3.8691805 6.5100615 10.3159956 10.4009657 10.3698223 10.0233915 4.6786579 10.2153837 12.8909303 12.7930152 10.3312594 9.4682261 0.00000000 0.90816000 0.91723000 -0.00041585 -0.00041585 0.00430210 -0.00013862 0.00000000 -0.41322000 0.00569190 0.00569190 0.00569190 0.02175400 -0.01476300 0.00680440 0.00680440 -0.40462000 -0.41641000 0.00305220 0.00917050 0.00180300 0.00875280 -0.27344000 0.27036000 0.28010000 0.00194180 0.00194180 0.00194180 0.01436800 0.00000000 0.00000000 -0.00239580 -0.00041585 0.00958830 -0.00110870 -0.00013862 -0.00013862 0.00000000 -0.41322000 -0.00097017 0.00499690 0.00275250 0.00569190 0.00430210 0.00430210 0.00430210 -0.01940000 -0.01476300 -0.01476300 0.00680440 0.00680440 -0.40385000 -0.40385000 0.00305220 0.00305220 -0.00815380 0.00402430 0.00180300 0.00652620 -0.52920000 -0.27344000 0.27036000 0.01070300 0.00194180 0.00194180 0.00027419 0.00489390 -0.40340000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0027084 13.8304977 8.5317557 10.3485876 3.7875996 10.4377327 1.0062621 1.4656611 8.2577174 8.2927928 -0.9936661 8.9048366 3.1761632 9.8164050 9.3582784 1.1761313 9.4885389 9.8176098 9.8765998 9.1635820 9.8523405 8.3225168 10.8228188 2.8642159 9.9977569 9.6319439 5.5531301 -1.9936661 10.3261894 4.1761632 12.6207149 11.9106816 8.0936980 10.2120283 9.0090501 8.7661234 5.0062352 1.7066853 1.0062621 5.8071359 8.1547118 8.6042875 9.9146278 6.0669309 8.0678629 5.4491784 10.1604203 7.0396582 9.8188135 -0.4088951 10.6577353 3.1355185 4.8517241 9.5280417 6.4753476 3.8391231 9.4950795 8.8454389 5.7273351 NA 13.6346806 0.8136068 9.8930747 -1.9936661 8.3281633 5.8264137 7.9792148 8.7066749 13.036395 3.983514 8.283522 13.629659 10.672459 10.444247 12.805517 12.661430 8.702759 10.932131 13.606467 10.786570 9.631487 9.132939 NA 7.570385 11.518111 11.2415014 7.5337121 9.1585198 9.0160636 8.2217679 10.3449297 7.1095225 7.1711418 11.3470588 6.3681782 1.4656611 8.4166865 5.8155216 12.3618615 10.5817743 8.5692408 8.1774121 12.8696954 5.4980881 12.6142444 10.1342294 10.3722841 9.6342248 11.6624365 9.8063260 10.7014634 9.1483421 NA 9.4139968 5.4656676 11.4198630 8.3725573 10.7546376 10.7142412 7.5434534 14.0158232 10.0132624 10.2823595 13.1570137 10.5219349 10.2910591 0.8136068 TCGA-EW-A1J3 61 0 NA 504 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white hispanic or latino NA NA 1 3 NA NA 1 4 4 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 11.0938875 10.0300181 11.9285774 8.5020652 8.9316686 9.4283447 9.9949826 10.4258913 8.8824184 11.9705426 12.2620699 10.5087043 5.9745041 15.8454516 3.8461824 8.1996355 7.6244870 8.8905750 9.2151439 13.7699574 1.0522072 14.3487120 3.0637790 9.5797873 10.9718645 7.1546257 0.7418337 10.6693258 9.6966221 1.5898593 6.6097402 7.5823076 NA 3.8122312 9.4927187 11.2161585 10.1393049 12.4310559 10.5352849 11.2904734 -0.5801375 11.8243924 13.8960610 8.1738680 9.5785257 10.4032659 11.4227311 4.6487358 2.7418337 9.6790708 11.8684195 0.7418337 11.0366946 4.4199164 6.4478222 3.3741075 10.8041601 12.5176190 10.2232400 12.5738638 13.1159055 7.7730627 11.4612329 10.7148440 11.5581878 10.9085093 4.1748059 12.9613152 12.8331473 NA 9.7730629 9.1168835 4.2015398 5.4860064 10.3598625 10.8343370 10.1613830 9.7407166 0.7418337 10.5511299 12.9316687 12.9471487 9.8170559 9.1914055 -0.00221680 1.24070000 2.31540000 -0.00537510 -0.00843850 0.00000000 0.52415000 -0.00470790 -0.00470790 0.00208050 0.00208050 0.00208050 0.01628600 0.01628600 0.01614600 3.57090000 -0.75547000 0.00416320 -0.00025910 -0.00110870 0.00000000 0.01223700 -0.74792000 3.65690000 -0.00180140 -0.01670400 -0.01670400 -0.01670400 0.61516000 -0.00221680 -0.00221680 -0.00143630 -0.00110870 0.00000000 -0.01282000 0.52415000 0.52415000 -0.00470790 -0.00470790 -0.00470790 -0.00097017 -0.00097017 0.00208050 0.00180300 0.00180300 0.00180300 0.00180300 0.01628600 0.01628600 0.01614600 0.51298000 -0.75547000 -0.75547000 0.00416320 -0.00025910 -0.00025910 -0.00110870 0.00000000 0.01293400 -0.75279000 -0.74792000 0.42805000 -0.00138580 -0.07787800 -0.01670400 0.61516000 0.00221930 0.00917050 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2368996 11.6731726 6.4860048 9.1418696 2.2272790 11.1345909 1.0048968 -1.5799219 7.9629480 8.0976356 -1.5799219 7.6137865 0.4198625 10.6633876 9.4826368 3.5492009 6.8875216 9.7174055 9.6451234 9.7139623 10.1472495 8.0253954 10.0856960 1.0048968 8.4114377 9.3777437 3.0048789 -0.5801375 9.6408989 5.0048789 12.1507046 12.2170709 7.5205786 10.5910928 9.0745520 9.2504313 4.9590746 1.4199164 1.2272482 7.0272459 7.5205786 7.0601609 10.3286839 4.4199164 8.1372842 5.0048789 9.6814233 4.9590746 9.1822980 -0.5801375 9.7151110 0.7418337 5.4085998 9.9990528 6.0098286 2.5898354 8.3799181 6.2591199 4.5284400 NA 13.8648339 -0.5801375 9.0419679 NA 8.0029989 4.9745064 8.1930551 8.1979931 14.694409397 6.070966720 9.021686811 15.845451592 10.057772595 11.236099722 13.769957392 12.927896454 8.644737768 10.450927904 13.758965716 9.994982569 9.679070809 12.224349610 0.004896843 7.660707613 11.254189568 10.6134414 7.4967316 9.4395068 8.4436705 9.4478980 10.2490005 5.3387809 4.5696612 12.2620699 5.3971971 2.4199164 7.9571346 7.7761481 10.1613830 9.8870120 8.8314270 6.8036197 11.6931289 4.3506528 14.6899890 10.1393049 10.5222199 9.8398762 11.1000558 8.6330203 10.7686442 7.7553062 0.4198625 7.9132311 3.0637790 11.0366946 6.5440371 10.9728229 10.8041601 7.2528064 14.0387030 10.5346344 10.1160142 13.0892994 10.6893350 10.1397327 0.7418337 TCGA-EW-A1J5 59 0 NA 477 breast stage iib t3 n0 (i-) m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 4 4 4 1 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 1 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 4 4 0 0 0 0 0 0 0 4 0 0 4 0 0 1 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 9.987762e-06 3.572012e-06 11.2040884 10.2715244 12.3862454 10.0764640 8.2326104 10.0817287 10.3109117 9.6641198 9.6400546 9.8821603 11.5919160 10.5904393 3.9808936 13.5868645 4.6285870 8.5847649 4.8813563 8.8397011 9.4009917 12.5463741 4.6739125 13.7456522 7.0880207 9.1654359 10.4997410 8.2071427 1.0740258 9.7804966 8.2262855 2.3959402 7.8154678 7.2288187 -1.9257686 3.9808936 10.4171863 11.2101907 9.6457532 12.5044531 9.5658536 11.7825456 1.3959402 10.6838719 14.8972434 8.9652071 9.4844520 11.2497061 11.9888528 4.7033555 3.9319856 9.3840453 11.8539251 -1.9257686 11.3681906 5.8421844 7.7605011 5.8553594 10.7837306 12.0974951 10.1916437 12.0801513 13.1348654 8.5179799 11.1504822 11.1322258 11.9367348 11.5345844 5.4315528 12.5994602 12.4353276 0.8813514 10.2940765 9.1929418 4.3426614 6.6776266 9.9210580 10.2157884 10.9688183 10.2715244 3.2834477 9.8712567 14.1241893 12.4145462 10.2288187 9.4620180 0.93398000 1.40740000 1.40740000 0.01315700 0.01315700 0.02617700 -0.04513800 -0.01208000 -0.55311000 0.00000000 0.00000000 -0.02166900 0.00036033 0.00036033 -0.01821400 3.65690000 -0.55741000 0.00382970 -0.00057363 0.02084700 0.00063765 -0.01111500 0.47437000 0.47437000 0.47437000 -0.05797800 -0.05797800 -0.05797800 0.45965000 -0.03414100 -0.01772100 0.00882370 0.01315700 0.02617700 0.02617700 0.01097700 0.01097700 -0.01208000 -0.55311000 -0.55311000 -0.03357900 -0.00351820 -0.58277000 -0.00904600 -0.00904600 -0.00904600 -0.00904600 0.00036033 -0.00391980 -0.01821400 -0.60597000 -0.55741000 -0.55741000 0.00382970 -0.00057363 -0.00057363 0.02084700 0.00063765 -0.01111500 -0.57599000 -0.58337000 0.47437000 0.00923030 -0.07887400 -0.05797800 0.46256000 0.00883620 -0.04758500 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5159074 12.3707017 7.5497339 9.7852373 4.8154678 10.1521513 3.7744392 -0.9260427 8.4479531 8.9312041 NA 7.4468658 3.6887063 9.9936088 9.6419567 5.5897006 8.4015532 9.4359444 9.5169441 10.3774960 10.0698702 8.7060871 10.1437860 3.6589655 8.5788195 9.7074499 3.7744392 -1.9257686 10.7572146 6.3028198 11.7686849 11.8375242 7.6831792 9.0754088 12.2729060 8.9053079 6.6887105 0.8813514 1.2439128 5.2135534 8.2514199 7.6701903 9.7670519 4.1614605 8.4254811 5.3501259 9.7219087 5.5334325 10.2360771 -0.9260427 9.8553603 3.0281978 5.0281978 9.5672857 7.3073566 5.8877811 9.4490401 9.1197603 6.1561498 -0.3409888 13.0973218 0.3959402 9.8981638 -0.9260427 6.6850249 5.2135534 7.5148695 9.0838293 14.8933683 5.6813312 8.5456758 13.5868645 10.4857764 11.0038138 12.5463741 12.7584753 8.5044532 11.2227949 13.5113300 10.6976535 9.3840453 8.5044532 -0.9260427 7.7779043 11.2570156 11.5688561 8.3524500 8.6542590 9.0069535 9.7097187 10.2122308 8.0740007 5.8749002 11.5919160 5.8154678 3.2439280 4.9808890 7.2807949 10.1617949 10.7886754 9.0227767 8.3697696 12.6432035 7.4071556 11.6271379 9.6457532 10.8799459 9.0505648 11.0484151 9.5547909 11.0214549 8.6295482 0.0739573 8.6106362 7.3663222 11.3681906 5.7178573 10.9155355 10.7837306 8.2376502 13.1354562 10.1207836 9.6523732 13.4758801 10.3562203 10.4609408 2.1614685 TCGA-EW-A1J6 70 0 NA 875 breast stage i t1c n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 1 1 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 4.508365e-07 11.410024 9.719664 10.660155 6.656099 9.607358 8.826024 8.939834 10.369974 8.993540 13.473458 10.159173 10.543800 2.031607 12.004269 4.287945 7.957081 7.100088 8.904711 6.609876 13.167104 2.321120 15.107812 3.385252 10.220884 10.975426 7.741267 2.031607 7.630232 9.996752 2.669049 6.236722 8.029102 NA 2.768565 8.634823 10.060742 10.106047 10.265228 9.411468 11.430827 3.719665 11.306181 13.599512 7.573075 9.811510 10.798322 10.999635 2.669049 -1.138283 9.296312 10.519002 -1.138283 9.949146 4.616569 7.137808 3.906082 11.390138 12.120544 10.520341 10.006979 12.551682 7.700887 11.274253 10.510491 10.727803 10.030356 3.446640 11.860274 12.309154 NA 10.354038 8.783524 4.287945 4.792423 11.047178 11.282433 10.656505 10.193160 1.861678 4.906078 11.768950 11.254269 9.677067 10.016502 -0.534700 0.324950 -0.131220 0.320120 1.130700 0.000000 0.320120 0.318030 -0.545780 0.319800 0.319800 0.333670 1.140500 -0.548850 0.324190 0.324190 0.328820 0.326240 0.322860 0.324790 -0.537840 0.321410 0.312740 0.334150 0.327940 0.272850 0.346000 0.286780 1.160400 -0.559070 -0.534700 -0.519590 -0.556970 0.000000 0.016146 0.320120 0.339500 0.347130 -0.545780 -0.556370 -0.598960 0.356570 -0.575460 -0.537440 -0.535910 -0.541080 -0.569020 -0.548850 -0.583120 0.341450 0.324190 -0.548750 0.342910 -0.559670 0.322860 0.322860 0.317870 -0.540190 -0.537440 -0.561760 -0.567530 0.334150 0.362970 -0.595560 0.286780 0.326890 -0.554070 -0.570550 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.246 -0.564 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 -0.108 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.246 -0.564 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 -0.108 9.7938983 9.1824840 5.6430423 8.5810725 3.8158828 10.8711623 4.4162723 NA 8.3454993 8.5481842 -1.1382828 6.8717919 2.8616775 10.8224096 9.7134326 1.4466268 8.1331463 10.5216794 5.3535350 10.6056764 9.6585505 7.8757039 10.0760026 1.6690268 7.8158796 9.0378566 2.7685655 0.8617172 10.7485233 2.7685655 12.8395895 11.9504718 7.6199067 9.7335887 11.3692305 10.0190305 3.5055353 2.9491427 2.3211200 1.8616775 9.9825694 9.2889964 11.3282699 5.3535350 9.7656105 7.0316080 10.2926587 3.9060825 10.3876936 -1.1382828 11.1554426 1.6690268 5.4008419 10.1711883 5.3279855 4.9909685 8.3066983 7.3333584 10.6199068 2.3211200 14.3206348 0.4466797 10.2203348 0.4466797 9.1436136 5.6945738 8.8303504 9.3241857 11.882624 7.476393 10.006342 12.004269 10.330308 10.254538 13.167104 12.435686 8.634279 10.044078 12.566884 10.979651 9.296312 8.638117 3.183614 7.616571 11.618031 10.245388 7.609876 9.119071 8.978027 8.798321 9.676979 5.872910 5.959715 10.159173 8.841823 2.861678 5.970207 7.261965 8.163180 10.642223 8.160891 9.719664 10.313410 6.856037 15.690968 10.106047 10.774947 10.546870 10.896482 8.827468 9.495587 6.337417 4.970209 8.286689 6.174566 9.949146 4.505542 10.339948 11.390138 7.080852 13.612704 10.629454 10.650402 12.130372 9.798321 9.660155 3.254004 TCGA-EW-A1OV 56 0 NA 789 breast stage iib t2 n1mi mx female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 4 4 NA NA 2 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 7.282743e-07 9.8714570 9.1803289 11.5806183 9.3320697 8.0742207 9.8075111 9.1323234 9.9146690 9.5937259 8.7529981 10.0048191 10.6445218 NA 12.4784539 2.5364757 9.9342445 4.1645047 8.8402533 10.0377670 12.1755667 1.0770379 12.8217698 6.2469667 8.9042884 10.5069708 4.5688955 NA 13.4690961 10.5673906 2.2469553 8.7964300 7.0077786 -0.9230305 6.4520798 10.0224849 9.9711009 8.7792137 10.1790167 9.9264462 11.3001377 14.1194272 10.5858262 14.7853436 7.3091262 11.0731614 10.5613604 10.2919672 5.6161989 5.1214341 8.9673052 10.7013796 NA 10.4329427 6.3438271 8.1377371 5.2063228 9.8210340 11.8606532 10.0882683 10.5022569 12.9366729 7.9899303 10.3768215 9.6981771 11.1565258 10.9256640 4.1645047 11.4664035 11.3124569 -0.9230305 10.5653834 9.2889293 3.8849105 6.8779405 10.7086728 9.3249685 9.5848357 9.6713656 1.3989523 8.0798559 13.3671319 11.6210395 10.1159600 10.1444753 0.2194100 0.2194100 0.2262300 0.0068044 0.0012025 -0.2136700 0.0207630 0.2245300 0.2245300 -0.6744400 -0.6691900 0.0031910 0.2249900 2.9654000 0.0196430 0.0114000 0.0114000 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.4304000 -0.3708700 -0.0065050 0.0042828 -0.2339700 -0.2339700 0.1637000 -0.0502350 -0.4339800 0.2194100 0.0068044 -0.4423200 -0.2136700 -0.2136700 -0.4474900 -0.4474900 0.2245300 0.2245300 0.2245300 0.0068044 0.0072217 -0.6744400 -0.1906100 -0.1906100 -0.1906100 -0.1906100 0.4306600 0.4534300 0.0196430 0.0114000 -0.4388600 -0.4388600 0.0072217 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.4332200 -0.4230900 -0.6619800 -0.0065050 0.0282000 -0.2146600 0.1637000 -0.0502350 0.0274970 0.0310140 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 0.000 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 0.000 10.8248145 12.2189885 0.6620232 9.7280928 6.6990935 12.2124297 6.4864312 -0.9230305 9.0442673 4.8843977 -0.9230305 8.5385203 2.5364757 10.3166396 9.3728100 3.9350259 11.6624731 8.9489462 8.0312375 9.6769539 9.5245376 7.7459257 10.6769539 3.8319279 5.9099315 10.2980238 5.6917519 -0.9230305 11.2321755 1.0770379 12.8869096 12.2616065 7.2668652 10.0239473 9.3739572 10.5333954 3.0770379 3.4693520 NA 1.6620232 9.1471619 9.7696565 10.1207519 5.4168904 9.0047747 7.4345932 10.0770411 5.2063228 8.9427743 NA 10.5323683 4.2864968 3.9350259 10.1417838 4.8644189 8.7476972 9.8402535 10.5512539 10.1390871 5.2063228 14.2679460 2.5364757 10.2637743 NA 7.8649438 5.3808229 8.0018535 8.6990928 10.975642 6.143130 8.550747 12.478454 9.658242 10.622005 12.175567 7.735253 9.948946 10.728541 13.363454 8.631630 8.967305 10.393323 2.246955 7.980923 11.287408 10.989930 6.077040 9.225518 9.810904 8.546683 11.184954 9.413548 8.269334 10.004819 5.007779 NA 5.646897 7.929196 11.404594 11.183931 6.903589 8.756521 10.149174 9.373957 11.715708 8.779214 10.669031 10.287712 10.662942 10.397842 10.473646 8.524124 2.246955 9.509489 9.943547 10.432943 5.246967 11.760694 9.821034 7.965784 14.519628 9.850180 10.195982 12.911018 11.702293 9.525157 4.983933 TCGA-EW-A1OW 58 0 NA 694 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.33581629 9.31259439 11.12414303 8.80655091 8.43267092 9.37440333 8.22853012 11.26724726 11.15635079 13.18614768 10.43866961 10.70568940 1.94080572 11.99965513 3.11074742 9.87966227 6.14049033 9.01228009 8.47024848 5.16963643 -1.05919428 9.15998634 7.95483840 9.61501013 11.04148017 4.46438074 NA 11.09436982 11.37388155 -1.05919428 7.39202885 8.16963643 NA 5.16963643 9.86711376 10.40280871 10.09690091 8.74656168 9.52484080 11.37074755 2.74818211 6.75459893 15.46480848 8.54383224 9.46535947 11.49468706 11.31558559 4.43267218 NA 9.14538884 10.68144189 -0.05919428 10.31204988 4.82345896 7.28954586 5.07010162 8.88918512 11.92345492 10.30932423 11.72074232 12.59130864 7.93517094 11.80209860 11.13175049 11.04148017 10.60570952 4.84770633 11.78179238 9.20760446 2.40023734 10.44315242 9.96179781 4.13380187 4.79879708 8.85968107 9.52484080 10.55966206 9.65592189 0.94080572 9.35232885 12.48747115 12.25709933 10.54537101 9.63168873 0.1305300 0.9055600 1.7007000 -0.3012000 0.1265800 -0.6954000 -0.2386800 0.7698600 3.6569000 -0.1530900 -0.1530900 0.2395600 0.1435700 -0.6963900 0.0824980 0.0712690 0.0712690 0.1197800 0.1373400 -0.6283000 -0.6761700 0.1227200 0.0964020 0.0964020 0.1038300 -0.2629800 -0.2599700 -0.2599700 -0.0297000 -0.6789200 0.1305300 -0.2006000 -0.2883200 -0.6996600 -0.7071900 -0.6947600 -0.6947600 0.0373800 0.8124300 0.0062693 -0.6571300 0.8459600 -0.1727900 0.1442200 0.1442200 -0.6574100 -0.6421600 -0.6963900 -0.6963900 0.0824980 0.0712690 0.0835090 0.0835090 0.1519100 0.1373400 0.1373400 -0.6215700 -0.6761700 -0.6665900 0.1400100 0.0964020 0.0964020 -0.2570700 -0.6681700 -0.2599700 -0.0147580 0.0932070 -0.3284100 0.127 -0.569 0.000 0.000 0.152 0.152 -0.628 -0.676 0.123 0.118 0.118 0.000 0.000 0.979 0.399 -0.260 -0.260 0.135 0.963 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.700 -0.700 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.513 -0.657 -0.233 -0.233 0.127 -0.569 0.000 0.000 0.152 0.152 -0.628 -0.676 0.123 0.118 0.118 0.000 0.000 0.979 0.399 -0.260 -0.260 0.135 0.963 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.700 -0.700 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.513 -0.657 -0.233 -0.233 8.03884987 13.75334611 2.11073072 10.17083829 2.39629652 12.88250735 1.52576822 4.36708446 9.09056501 10.55644743 9.73928967 9.25936053 6.54814837 10.73604578 9.24687952 4.74817138 7.02828072 10.50639596 7.49540656 8.90081972 8.77342310 7.71230757 12.08945326 1.74816064 8.75299506 9.86042606 4.66873752 NA 10.91092367 3.89501173 12.84394648 12.59209377 8.92665981 10.21926728 10.96457213 9.26837053 5.52578074 3.11074742 -0.05919428 2.40023734 8.54258850 9.06881213 6.45651706 7.12072725 10.24899751 5.82346151 10.40893270 7.05975869 10.70734671 0.94080572 12.60781844 3.46438074 4.66873752 10.39240501 7.33399344 6.15027127 8.64990174 8.24915660 8.02828072 2.40023734 13.09135844 0.52576822 10.84130731 NA 9.67213677 3.98520895 8.20526054 6.64817636 12.59478244 8.25370096 7.55184282 11.99965513 9.19111623 11.44687740 5.16963643 10.27732437 9.15756370 10.93411005 13.12755108 11.19022760 9.14538884 8.59366264 -0.05919428 8.13064212 10.68691218 10.940113 6.440663 8.861171 9.878927 9.763389 9.829896 5.811183 6.017632 10.438670 10.353917 NA 9.973552 9.327402 12.840741 9.510673 8.012280 9.166025 8.916666 6.307141 10.318115 10.096901 9.609703 10.413509 11.545603 11.175037 10.350739 9.682285 5.432672 9.589975 7.479977 10.312050 7.006907 10.059129 8.889185 7.525780 13.813300 9.768954 10.547686 12.927282 11.066877 8.727087 3.262749 TCGA-EW-A1OX 43 0 NA 911 breast stage iia t2 n0 mx female 2009 NA yes mucinous carcinoma 0 white hispanic or latino NA NA 2 1 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.427581e-07 10.4054838 10.6623922 11.4616580 10.0671613 8.5111047 9.4491918 10.4924671 10.3529157 9.9997744 15.2313340 6.5161460 11.1301711 1.3529280 12.4033313 4.4683943 8.6055814 7.1773438 8.0347401 8.7552174 13.5198634 NA 14.7022894 -1.2320910 9.9949373 10.5119461 9.6437027 0.3528715 4.7903185 7.9846993 3.6748448 6.3678655 5.5228404 NA 4.6008406 10.1419060 10.3032287 10.5476727 9.1309929 10.4787597 11.6348458 NA 10.9904464 14.5809077 8.2267903 10.9406933 11.9869705 11.5265929 5.4261641 7.2993344 9.8326961 10.1926444 NA 11.4237076 1.5753123 0.3528715 2.8554117 10.8705852 11.8405884 9.8881912 11.2677992 12.8494367 7.7133968 11.0306354 10.8582642 11.3718114 11.3235011 4.8123493 11.6910950 11.7578799 -0.2320910 10.2212239 8.6957311 0.8486380 2.0898710 10.3153298 9.8540895 11.5462358 9.9138854 NA 7.2191646 10.9716071 10.2673009 10.1166815 9.2707852 -0.0128480 0.7313900 0.8679100 -0.0045532 -0.0026291 0.0179670 0.0161490 -0.0318450 0.0105670 0.0085677 0.0085677 0.0179670 -0.0110570 -0.0110570 0.0185260 1.6457000 -0.9852700 -0.0242600 -0.0084466 0.0276410 0.0065293 -0.0261640 -0.0742740 -0.0742740 3.6569000 -0.1061800 -0.1061800 -0.1059100 -0.0221920 -0.0908870 -0.0128480 -0.0067782 0.0079206 0.0179670 0.0179670 0.0161490 0.0161490 -0.0138120 0.0105670 0.0105670 -0.0191360 0.0015286 0.0076423 0.0143330 0.0143330 -0.0171130 -0.0171130 -0.0110570 -0.0110570 -0.0081593 -0.0935320 -0.9446600 -0.9721000 -0.0242600 -0.0084466 -0.0353090 0.0027776 -0.0105630 -0.0261640 -0.0170590 -0.0742740 -0.9669600 -0.0067596 -0.1061800 -0.1061800 -0.0221920 0.0202060 -0.0635660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.6986908 9.2140026 1.0899049 9.2856228 3.7679514 12.1793319 0.7679937 NA 8.4456729 5.8123468 NA 5.7791809 1.7679514 10.2284091 9.1288004 -0.2320910 4.8554167 10.4176586 6.6259338 10.8534257 9.6986536 7.6228220 10.8037834 -0.2320910 10.7246925 9.9865165 -0.2320910 NA 12.0835274 4.6748448 11.2730205 12.5107890 6.0717348 10.1044598 9.3397059 9.3071120 5.9075036 4.6008406 -0.2320910 4.6505980 8.4261649 9.0312226 9.6979514 0.7679937 8.0016688 6.9177003 10.8669723 6.5161460 10.7833683 NA 8.6853252 4.1602668 9.0206186 9.5975651 7.0899716 -0.2320910 7.6718354 5.8447698 9.4288406 NA 13.1807216 -0.2320910 10.7412919 NA 7.8686158 5.4403775 7.8790888 8.6688201 12.163487 4.767951 8.879089 12.403331 10.313401 10.459697 13.519863 13.428172 8.173095 11.089318 13.343020 9.590524 9.832696 8.839416 2.089871 8.600843 12.491294 11.2670518 7.1166819 8.3510359 9.3148479 7.5261768 10.4911534 1.3529280 9.5468518 6.5161460 7.0111277 -1.2320910 2.0898710 7.0860438 8.6197024 9.6582176 7.5261768 9.6498321 11.7805778 0.7679937 11.1651038 10.5476727 10.9243525 9.8102967 11.3479762 8.7480929 10.6421663 9.0323960 NA 7.9805955 -0.2320910 11.4237076 3.4118059 10.5603369 10.8705852 7.0533557 13.0394893 10.2051851 8.8998104 12.6048912 10.2355588 9.6868165 1.5753123 TCGA-EW-A1OY 63 0 NA 908 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma 0 white hispanic or latino NA NA 1 1 NA NA 1 2 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.525908e-06 3.81477e-07 9.551492 9.716551 11.279788 8.625095 9.391962 7.927250 10.349734 10.238108 9.450678 14.145164 10.784914 10.766199 2.217603 13.127401 2.954550 9.438910 6.996034 8.714778 10.431371 12.723844 2.047678 13.795492 4.539519 9.256620 11.370721 5.586825 2.954550 9.053291 12.181451 2.507110 7.799210 6.748106 NA 4.333066 9.625095 9.545518 9.169200 9.746371 8.886870 10.582456 7.150955 11.081778 14.110809 7.386714 9.914173 10.521372 11.223840 4.439982 1.632640 8.825744 10.303285 NA 10.475503 6.984305 4.691523 4.295591 9.003316 11.780046 10.368467 11.603454 12.115941 8.305054 10.686102 10.617997 10.818743 10.721859 4.632629 12.429750 11.689492 1.047678 10.469205 10.076954 1.632640 5.295594 8.197414 9.564351 10.825744 10.782376 6.295594 7.621313 11.959807 10.810048 10.324372 9.092060 -0.331100 0.637000 0.623690 0.661240 0.069669 0.247950 -0.370870 -0.384930 -0.360680 -0.473530 0.216530 2.284400 1.009000 0.017963 0.603590 -0.403740 -0.428370 -0.423640 0.148750 -0.368610 0.730190 -0.361470 0.914600 0.212070 1.609500 0.184950 3.656900 -0.054420 1.394500 -0.359200 -0.331100 -0.290710 0.062835 -0.725170 0.263570 0.012516 0.012516 -0.384930 -0.360680 0.756240 -0.010646 0.070386 -1.292900 -0.415420 -0.415420 -0.415420 -0.415420 0.017963 0.017963 0.603590 -0.403740 -0.428370 -0.409040 -0.423640 -0.438970 -0.438970 -0.368610 0.092895 -0.077611 0.010156 -0.601190 0.212070 -0.230550 -0.374030 -0.478600 0.563120 -0.686510 -0.399190 0.000 0.000 0.604 -0.428 -0.275 0.149 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.500 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 0.000 0.000 0.000 0.604 -0.428 -0.275 0.149 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.500 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 0.000 7.7958591 12.8225564 7.6733755 9.6354439 2.0129977 10.3197130 1.3696061 NA 9.2473387 8.2644121 0.6326405 8.1110616 2.2176030 10.3232090 9.4926812 1.6326405 6.8224536 9.7350421 8.5868252 12.0204668 8.9362422 7.0588933 10.3757804 1.3696061 9.0490747 9.4812519 3.5712278 NA 11.1910497 1.0476780 13.1150168 12.5915441 7.1083624 10.0313726 8.5234000 10.0098395 4.2175952 5.3875176 NA 8.5653359 9.6250953 9.2350186 8.4442712 2.5071096 8.1750420 7.9724790 10.1743710 6.3875159 10.4739312 -0.9523220 11.8576355 2.6326405 3.8025551 9.8869096 7.1134328 5.5070969 9.8590412 6.9118521 7.4612944 0.6326405 14.2706877 NA 11.4046685 NA 9.0824655 4.6022549 8.2595545 8.7891335 11.142407 12.364796 8.515272 13.127401 9.326116 10.878578 12.723844 12.383615 8.579048 10.019928 12.326987 12.088127 8.825744 9.225086 NA 8.444271 11.401365 10.81378119 6.29559447 8.26198535 8.84045662 9.09751494 9.53408923 5.61752183 3.95455927 10.78491379 9.04060481 0.63264048 6.40521806 7.57627648 9.58682515 9.76962002 10.26925352 10.25833778 10.86544957 5.85502043 11.00341074 9.16919997 10.79753589 10.15160986 11.81647103 9.53651086 10.22321594 8.33075468 0.04767798 8.59839387 6.69152300 10.47550303 5.50709690 10.35941476 9.00331636 7.30990194 14.21794362 10.53801593 9.99895113 12.29411014 10.38026245 9.12046885 -0.95232202 TCGA-EW-A1OZ 56 0 NA 1229 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 NA NA 1 4 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.179111e-06 3.121176e-07 9.2156155 9.5186758 10.8776994 9.0367717 10.0071033 8.9974011 9.6296067 9.4470650 10.7882520 13.5790745 9.9876334 10.5699799 NA 17.0668211 2.7120014 9.1070256 6.3158198 7.9235028 8.7273405 12.6595975 -1.5357500 13.6994500 NA 10.1791841 10.9571764 7.4065860 2.5515406 8.5068526 10.1164683 0.0490731 9.2690091 6.8216235 NA 3.4182709 9.1088292 9.7944282 6.8986993 12.2115302 9.8072572 11.2367984 0.7860108 10.3528147 15.2775897 6.4851064 9.0583961 10.4784407 11.0808500 5.4752989 3.9559265 8.6747428 10.3405884 0.0490731 11.0856655 7.8172184 5.6637431 5.3467158 9.4255212 11.7018790 9.5455549 11.3177709 12.6862626 6.7494739 10.3765867 9.8911277 10.3577522 10.1320700 4.7860003 11.9046811 12.1788536 NA 10.2168702 9.1097299 2.5540731 5.8819240 9.9614244 9.5732492 11.0513802 9.2657798 1.2714257 9.1302954 13.6471640 11.0810797 9.9669032 9.1817479 0.1101500 0.0552360 1.0309000 1.0638000 1.7457000 -0.3581200 0.0341810 0.7093500 0.0047171 0.7388200 0.7388200 0.7361500 0.6904500 3.3227000 -0.3812900 -0.3812900 -0.3812900 -0.0198800 0.0547290 -0.7676200 0.7414700 -0.3830800 0.5905300 3.6569000 1.8123000 -0.1673300 -0.1015200 -0.1015200 1.4121000 -0.8092800 -0.5771900 -0.0145750 0.0104910 -0.8013000 -0.3528800 0.0161820 0.0285490 0.7093500 0.0047171 0.0157940 0.5118100 0.5345800 -1.2330000 -0.8147900 0.0192900 0.0022858 -0.0802110 0.0651520 -0.4203000 -0.4698000 -0.3812900 -0.3812900 -0.3812900 -0.0198800 0.2739400 0.2739400 -0.7307300 -0.0362010 -0.3605000 -0.4014200 -1.2929000 -0.8397400 -0.4562200 -0.1673300 -0.1015200 -0.4752800 0.2727600 0.8779600 0.085 -0.358 -0.381 -0.381 0.000 0.000 -0.731 0.710 -0.383 0.313 -0.072 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.717 0.255 0.635 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.758 0.000 0.000 -0.197 -0.197 0.085 -0.358 -0.381 -0.381 0.000 0.000 -0.731 0.710 -0.383 0.313 -0.072 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.717 0.255 0.635 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.758 0.000 0.000 -0.197 -0.197 8.2487065 13.8703097 8.0167403 9.6495664 3.8584486 11.1424515 2.1644967 NA 8.1610391 8.0676979 -1.5357500 7.4231748 2.4640670 10.2367984 9.2977522 3.1645128 7.0071035 8.9326955 10.3095615 12.6603662 8.5592972 6.9438522 11.0516146 1.4640932 8.2794546 10.6374363 6.7540898 -1.5357500 12.5506224 1.7860108 13.1619078 11.3083849 7.4640711 9.2770509 8.6074546 10.1645111 7.4752989 1.4640932 -1.5357500 NA 9.3709620 9.4470650 10.5778136 4.0490382 8.2663457 9.3911087 10.2042739 6.3095618 10.2933978 NA 9.8177697 2.5515406 3.3709594 9.2866583 7.6930583 3.4640670 8.5568287 8.0970666 4.9718654 0.0490731 13.8954385 0.4640409 10.5699799 NA 8.9204258 3.5515283 7.2156155 7.2874390 12.012826 5.003229 8.656364 17.066821 9.122283 10.665276 12.659597 10.350911 8.584309 10.230600 12.857395 10.942335 8.674743 10.486439 1.049003 8.434177 11.401261 11.190715 6.830394 7.737867 9.487826 8.183357 10.860537 7.167975 4.218959 9.987633 5.284251 1.049003 8.047154 7.571550 11.612548 9.932695 8.325158 8.947887 10.291811 4.873464 11.097796 6.898699 10.616039 9.940311 10.874523 9.468994 10.758118 8.566047 -1.535750 9.188159 4.939805 11.085666 7.452756 10.855315 9.425521 6.458425 13.965784 9.929128 10.042916 11.901173 11.292406 8.859606 1.271426 TCGA-EW-A1P0 55 0 NA 1251 breast stage iib t2 n1b mx female 2008 NA yes other specify 1 white not hispanic or latino NA NA 5 3 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10.6687013 9.7227235 11.9818108 9.9351637 8.4076455 8.7219604 10.6949934 9.8903581 8.2619562 13.8390662 11.0371555 11.0901597 3.5926723 8.8698356 2.9252589 8.6451450 4.7685284 8.6273238 9.8957817 12.9860282 -0.1621375 14.3287035 -1.1622989 9.7869163 10.5716526 9.7817698 -0.1621375 10.5456149 8.7019763 3.9670764 7.3691716 6.7143073 NA 2.6451483 9.2598548 10.5788355 9.6563721 9.7766344 9.3346438 10.2258073 11.9918169 11.2974777 14.5326375 7.6785368 10.7027499 11.8575544 11.3092112 4.9875392 -0.1621375 9.2598548 10.3221094 -1.1622989 11.0484613 4.2640560 5.5520358 4.9875392 10.8549464 11.9897578 10.6631463 10.1266561 13.0464054 6.2724189 11.0530196 10.4770357 11.2384026 11.3478123 5.4227510 11.1223249 12.6356541 NA 9.9521830 10.2828048 0.8377818 4.7685284 10.6910995 9.8539018 10.0892724 10.6183297 1.6451483 4.5926783 11.5784140 10.7747959 10.4024159 8.6926584 1.00820000 1.21700000 0.62588000 0.00083195 0.00083195 0.00097064 0.21024000 -0.00595220 -0.75253000 1.84000000 1.77660000 1.80610000 -0.00235530 -0.00823070 -0.01050800 -0.01050800 -0.01050800 0.00221930 0.00221930 0.62388000 0.00000000 -0.76115000 -0.00429290 -0.00429290 -0.00429290 0.00541390 -0.01424200 0.00722170 0.62315000 -0.00512270 -0.00207840 0.64341000 0.00083195 0.04726800 0.68682000 0.23985000 0.23985000 -0.00595220 -0.75253000 -0.75253000 2.38690000 -0.77583000 -0.77013000 -0.00609040 -0.00609040 -0.00609040 -0.00609040 -0.00823070 -0.00823070 -0.01050800 -0.01050800 -0.01050800 -0.01050800 0.00221930 0.00221930 0.00221930 -0.00124730 0.00000000 2.37810000 -0.00553750 -0.00429290 -0.00429290 0.00138680 0.00541390 0.00722170 0.62315000 0.00013863 -0.01257600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.651 0.651 0.623 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.387 0.000 1.036 1.806 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.651 0.651 0.623 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.387 0.000 1.036 1.806 0.000 0.000 0.000 0.000 8.0472434 11.7303328 5.5520358 9.3104808 3.9252494 10.6022470 1.1596938 NA 9.2290336 7.5031261 -1.1622989 8.7341223 NA 9.6427276 9.2386694 0.8377818 8.4339797 10.3846845 6.9199395 9.7707428 10.0968740 7.7265329 9.3495426 2.6451483 9.2755421 9.6403064 3.0077158 NA 10.4404888 3.1597261 13.1336306 11.9159408 8.7476831 9.4367730 8.2301074 9.1653427 4.2301108 2.0076978 NA 7.8794491 8.7112340 8.7890745 9.6627487 3.3613473 4.0276141 7.5893343 10.5674107 7.0176993 9.6571707 NA 11.5468738 2.1597261 3.4227578 10.2977850 6.0853375 1.6451483 7.8406049 7.8462187 6.6643378 NA 13.9338462 1.1596938 10.5416935 NA 9.3074317 3.0857136 7.8093334 9.7491819 13.2232493 3.3613473 9.0998848 8.8698356 10.5532287 10.9427162 12.9860282 10.1272325 9.2869387 10.8374377 13.1009858 11.8913765 9.2598548 7.2343950 0.8377818 7.3846845 11.6832800 10.552894 7.648362 8.632206 8.461671 8.909252 10.134018 6.076196 6.481646 11.037156 5.085718 -1.162299 6.977342 6.842291 9.503126 9.512865 8.948926 9.065406 9.822920 5.141572 11.465294 9.656372 10.030699 9.929886 10.881842 9.370146 10.713539 9.390459 -1.162299 8.927399 4.047242 11.048461 5.925252 10.579678 10.854946 7.305395 14.331176 10.237068 10.512424 12.780396 10.278659 9.923262 1.837782 TCGA-EW-A1P1 68 0 NA 1210 breast stage iiic t2 n3b mx female 2008 NA yes infiltrating ductal carcinoma 11 white hispanic or latino NA NA 2 4 NA NA 3 4 2 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-08 10.13147618 10.02385843 11.28008370 9.79017823 8.33095317 8.84847679 9.20892932 10.28302259 11.36102508 12.57360975 9.76096456 10.23829821 1.82769710 12.24117220 3.47977380 11.11276724 6.90908423 9.49911000 8.50818063 11.02034044 1.34227027 10.06336771 5.32412293 9.37628604 10.35069713 4.10780502 NA 10.08306122 11.85993792 5.21016674 7.54390259 8.35349577 0.02034218 5.21016674 9.90603675 10.39102787 9.75927720 10.13017116 9.62118265 11.32269376 5.26826969 8.31266200 15.63895537 7.93439678 9.45183814 11.39456489 10.87715497 5.74825995 1.82769710 9.55172191 12.00760447 NA 11.06984869 7.23465938 7.00902463 5.52813369 10.33944797 11.68434323 10.22857485 12.31825978 12.78168391 7.61653047 10.97707961 10.45111187 11.08002289 11.22277039 4.74826263 11.47077848 10.14187391 NA 10.84768316 9.66599884 3.66419837 5.89070447 10.83492291 10.13473357 10.41587463 9.71295596 3.82769710 9.21386584 13.10174067 13.21870875 9.69453271 9.49708659 0.0123760 0.0123760 0.0123760 -0.0080244 -0.0080244 0.0197830 -0.0335410 -0.0234290 -0.0234290 0.0438650 0.0438650 0.1114000 0.0559430 -0.0423810 -0.0417020 -0.0417020 -0.0417020 0.0000000 0.0000000 -0.0468540 0.0693820 0.0203430 0.0076609 0.0076609 0.0076609 0.0085841 0.0085841 0.0365120 0.0043021 0.0123760 0.0123760 -0.0024889 -0.0080244 0.0197830 0.0197830 -0.0335410 -0.0335410 -0.0234290 -0.0234290 -0.0234290 0.0400440 0.0400440 0.0438650 -0.0210980 -0.0210980 -0.0210980 -0.0210980 -0.0423810 -0.0423810 -0.0417020 -0.0417020 -0.0417020 -0.0417020 0.0000000 0.0000000 0.0000000 -0.0468540 -0.0147410 0.0203430 -0.0051227 0.0076609 0.0076609 -0.0219210 0.0085841 0.0373590 0.0043021 0.0188030 -0.0317680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.9613880 13.5932775 7.2491590 10.2853694 3.6053047 10.5126943 1.0203422 3.6641984 8.5041564 8.9045109 0.6053047 9.7559895 4.7752297 10.1399300 9.5882966 1.3422703 11.1353841 9.9976204 9.5758882 8.9933203 9.4857947 7.5201865 12.5474509 3.8276971 8.2101648 10.2364801 7.2346594 NA 10.7651743 3.9745385 13.2786120 12.1538038 9.3478931 10.2455478 9.2101650 9.2999509 7.6127977 2.7207819 NA 3.2682697 7.6856767 9.4736110 7.9569784 6.8783219 8.4411008 5.8276946 9.9897270 6.3601904 9.9657843 1.6053047 11.5081805 3.8276971 4.9976221 9.6613987 6.2443429 2.1902672 10.2157127 9.0076045 5.2101667 5.0203422 13.8114524 2.8276971 10.6368893 NA 8.7516595 7.3822842 8.3264021 8.3997188 11.3169699 6.6423926 8.6551514 12.2411722 9.9444106 10.5987131 11.0203404 11.2818478 8.8131309 10.6967383 14.2774704 12.1872881 9.5517219 7.8689633 0.6053047 7.5081806 11.1111145 11.644907 5.190267 9.611863 7.771884 7.859544 9.846237 6.699821 7.128865 9.760965 7.200249 1.342270 7.827695 6.360636 12.164521 10.688339 8.545861 8.433968 11.453143 6.720781 11.284645 9.759277 10.292387 9.124939 11.405664 10.712084 10.463284 9.175159 3.479774 9.436431 5.342270 11.069849 7.843708 11.334924 10.339448 7.559499 14.223459 10.085757 10.422820 13.054796 10.535054 9.472582 3.479774 TCGA-EW-A1P3 48 0 NA 1611 breast stage iia t2 n0 mx female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 4 3 4 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 9.7879972 8.9150434 11.0244849 7.6203445 9.3052966 9.2322993 9.8042785 9.0516377 9.5799361 12.0157724 11.8009017 10.0823746 2.6162401 13.7807587 5.1568213 9.1398138 7.1398133 8.7585910 9.5275075 13.2656712 1.1568496 14.7774122 3.6803806 9.7910412 10.4877370 5.3065685 0.1567849 8.7970652 9.6284953 2.3267387 7.3711389 7.2175157 NA 3.3267387 8.3928343 10.2389692 9.4035607 10.9348973 9.7464713 11.3094218 12.8258159 11.4088941 13.8696158 7.9851788 10.5804613 10.3084709 11.4983389 4.8292458 5.9381799 7.9283093 12.3087880 0.7417474 11.0912481 3.6803806 5.1791886 4.0637100 10.1554105 11.8940675 10.8744965 12.9253146 12.9905009 8.8042785 10.6945238 9.8380585 11.0860785 10.5830848 3.4047533 12.0210063 11.0535310 0.7417474 10.4645902 8.4142079 3.8578118 4.0637100 10.0934581 9.8310123 10.0318014 9.3928343 2.3267387 9.8555248 13.3928343 11.2359715 9.8441957 9.9601440 -0.11307000 0.85584000 0.86302000 0.03727300 0.03727300 -0.02406000 0.00171880 -0.00797010 -0.70429000 -0.11883000 0.12060000 0.16436000 0.00137450 0.00137450 -0.00146990 -0.00146990 -0.00146990 -0.01045400 -0.01045400 -0.17798000 0.50534000 0.01704000 0.50706000 0.50706000 0.45639000 0.01690000 0.01690000 0.00505160 0.03885300 -0.11307000 -0.11307000 -0.02207800 0.03727300 -0.02406000 -0.02406000 0.00171880 0.00074782 -0.00797010 -0.02406000 -0.02104400 0.75631000 0.68578000 -0.11883000 -0.55311000 -0.55311000 -0.55311000 -0.52794000 0.00875180 0.02474400 -0.00216250 -0.00146990 -0.00146990 -0.00146990 -0.01045400 -0.01045400 0.01676000 -0.17798000 0.51497000 0.01704000 -0.65832000 -0.65208000 0.50706000 -0.11804000 0.01690000 0.00505160 0.02542000 0.07921600 -0.67936000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.032 -0.658 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.743 0.000 0.000 0.000 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 -0.119 0.002 -0.553 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.032 -0.658 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.743 0.000 0.000 0.000 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 -0.119 0.002 -0.553 -0.553 0.000 0.000 8.5491374 12.1993345 5.6162518 9.6213658 3.2003474 10.7394325 2.4787389 NA 9.0816326 8.8676266 NA 7.3860237 3.4047533 10.6330600 9.3065673 5.4047465 7.9928704 9.0007412 10.0622071 12.0025062 9.4729093 7.4922105 10.9758016 3.1568173 8.0210060 9.3759886 4.5830858 NA 10.9825740 2.9641768 13.3396800 12.3784072 8.0085692 9.7219222 9.2012143 9.7427216 3.4047533 1.7417905 0.7417474 8.7171531 8.8898355 10.1412386 9.5011161 4.2442858 8.8025506 7.8078720 9.7632253 7.0210066 9.8476911 -0.8432151 9.6244257 3.0637100 4.5491393 10.4278395 7.8056807 4.7715317 9.1511736 6.9833687 6.8150310 -0.8432151 14.2147695 -0.8432151 9.8078718 0.1567849 9.5512828 5.8150323 8.1455047 8.1847261 14.069875 6.296371 8.886441 13.780759 10.177800 11.200189 13.265671 11.819043 9.282699 10.116822 13.636727 9.759519 7.928309 9.446839 1.478765 7.296371 11.942068 10.3753833 6.5576996 9.1497585 8.4047478 8.6764564 9.4576989 6.2963711 6.8915298 11.8009017 6.0148016 0.1567849 8.6862508 6.6822629 11.3518847 10.0294950 9.0333371 9.8015777 9.7436599 5.0637100 13.8495609 9.4035607 10.6182996 10.3478793 10.8834640 9.8641792 9.9398184 7.7152406 NA 9.0650175 5.8006773 11.0912481 6.2757614 10.1847261 10.1554105 6.3267459 13.9098279 10.2369714 10.6446602 12.6935530 10.8585597 9.2349709 2.4787389 TCGA-EW-A1P4 43 0 NA 907 breast stage iia t2 n0 (i-) m0 female 2009 NA yes medullary carcinoma 0 white hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.387189e-06 4.161568e-07 9.4012164 9.1905223 11.6197270 9.4869152 8.3442116 9.5985119 9.7467656 11.2236518 10.7626160 12.5938236 10.4088914 10.3787664 -0.3972581 11.5505642 3.6471418 12.2517762 5.4607262 8.8194906 7.3709289 5.7925691 NA 9.1640325 6.4356353 9.1184446 9.4769576 7.0415365 2.3031962 13.1801410 12.7491542 2.4100968 6.6361678 10.6457719 NA 4.3031816 8.6742071 10.4447021 8.8800319 9.4387950 9.7975015 10.6961623 -1.3970681 8.0498279 14.8377491 7.6450603 9.2484032 10.7845181 10.6471387 3.1877044 0.1877677 9.5764420 9.6948410 NA 10.7050485 4.5096325 7.5511122 7.9536837 8.5216079 12.2385761 10.1448093 11.4413577 13.6505928 7.3939078 11.9921071 11.0666623 10.9308585 11.0626885 4.3306660 11.4846233 7.9042408 0.9247080 9.7581954 9.4990771 5.3446155 4.2174556 12.1313209 10.2773783 11.1592507 9.3775318 4.3031816 9.2475022 12.1009706 11.9018095 9.7132279 10.1668942 -0.0234290 0.0077783 0.0211830 -0.3302500 0.4434200 0.2435900 1.2905000 0.3780800 0.2777400 -0.0145030 0.0068044 0.6993300 -0.0110600 0.6542400 -0.0494020 -0.3222800 -0.3222800 0.3378800 -0.3614700 -0.0858550 -0.3517400 0.3629700 -0.3350300 -0.3221700 0.9793500 0.3312600 0.3312600 0.3438800 -0.2469100 0.0550880 -0.0234290 -0.0103480 -0.3562400 -0.3553700 -0.4214500 -0.3715500 -0.3666900 -0.7469900 0.9420100 0.2984300 0.6978300 0.0000000 -0.0608830 -0.3117800 -0.3117800 0.2704800 -0.3256500 -0.3262300 -0.3262300 0.0095883 -0.3222800 -0.3450400 -0.3484700 0.3378800 -0.3346800 -0.3346800 -0.0024938 -0.3405600 -0.3541900 0.5700600 -0.3350300 -0.3221700 0.8687100 -0.3336400 0.3438800 -0.3382500 0.2946900 -0.3377900 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.914 0.000 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 0.000 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.914 0.000 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 0.000 8.565641 13.265469 5.141903 8.855410 2.850679 11.120906 1.924670 2.303196 8.418128 9.412513 3.126312 8.720297 5.344211 11.142146 9.592139 2.995068 6.684893 10.819187 10.182532 9.772670 8.550747 6.855410 11.973296 2.509645 8.080503 10.540486 1.772688 NA 10.187707 5.732028 12.514230 12.699460 7.299712 9.677555 9.313551 10.536804 3.812200 3.062174 -1.397068 2.062191 9.106570 9.624419 6.003625 0.924708 10.701586 7.285739 9.706688 4.246598 9.961396 NA 11.398176 4.062174 3.062174 9.538072 7.969045 5.580025 8.330665 8.275170 7.545260 3.303182 13.134187 0.924708 10.088071 NA 9.671523 3.062174 8.435635 7.390647 12.942931 9.256485 9.323844 11.550564 9.920722 10.990493 5.792569 11.452736 8.325552 11.262518 13.053763 11.882210 9.576442 7.988607 1.187704 8.515634 9.678892 11.2497533 2.3031962 8.5656406 8.3458962 6.7895023 9.8223428 8.1438413 5.4229226 10.4088914 10.1125197 NA 9.6587049 9.6143983 12.9524406 10.1164722 7.7268659 9.1905223 9.2698563 7.0744198 8.6275379 8.8800319 9.9286122 9.6097719 11.9009504 11.4413577 10.2017276 9.6768862 NA 9.3825131 7.0078862 10.7050485 6.7216857 9.8979397 8.5216079 8.1936683 13.7034481 10.7112691 10.8574781 12.8326149 11.2671919 8.4213268 0.1877677 TCGA-EW-A1P5 77 0 NA 703 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 3 NA NA 1 1 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 10.3405839 10.3153740 11.8079261 9.7953100 8.8944334 9.9615215 9.7501043 10.3431231 9.4003244 14.3926333 11.2910314 11.2444781 -0.3932735 12.1693213 2.3071662 9.1954357 6.3815083 7.9510171 8.5030533 12.7585305 0.9286546 13.8409398 3.8921190 9.7429561 10.0641020 6.5374592 NA 9.3226831 8.7034361 0.6067265 7.7891156 7.7513794 -1.3932735 2.6067265 9.4870699 10.3002081 11.3467126 11.0356047 9.6081293 11.3422771 1.7766515 10.5601901 14.3199196 7.9786064 10.3507139 11.3073776 11.2729451 5.7462725 5.0661538 8.9958146 12.9992398 NA 10.9858286 4.5609167 6.9990383 4.8921238 10.1115401 11.6877051 11.5168016 11.9109298 12.5778155 8.4300883 10.7669077 10.5543909 10.9387577 11.0615344 5.2360793 11.1090557 8.6822004 0.1916890 10.8210403 9.0671770 1.1747260 6.2287725 10.1075630 8.5374584 10.0738172 9.5022964 0.1916890 10.0615344 12.7571031 10.7539261 10.5038102 9.6707902 -0.1703100 -0.1703100 0.6730700 -0.1833600 0.2729500 -0.1866000 0.6186100 -0.1706000 -0.1694200 0.2325600 0.2325600 0.2354400 -0.5851000 -0.5851000 0.2279200 0.2334500 0.2334500 -0.1742400 0.2242400 -0.6511700 0.0071489 0.5516500 -0.6375500 0.2058000 0.2058000 0.0000000 0.0000000 0.0000000 0.2515100 -0.1703100 -0.1703100 -0.1612800 -0.1833600 -0.1866000 -0.1866000 0.6222400 0.6222400 -0.1672600 -0.1706000 -0.1694200 0.2267200 0.2163700 0.2325600 -0.1671400 -0.1671400 -0.1671400 -0.1671400 -0.5851000 -0.5573700 0.2279200 0.2334500 -0.6518300 -0.6518300 -0.1742400 0.2242400 0.2242400 -0.6181500 0.0071489 0.5666700 -0.6389700 -0.6375500 0.2058000 0.2632600 0.0000000 0.0000000 0.2560500 0.2379800 -0.6286500 -0.585 -0.585 0.233 0.233 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.000 0.211 -0.585 -0.585 0.233 0.233 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.000 0.211 8.1536154 13.1596303 5.8828460 10.1555431 2.8546540 10.8558346 0.6067265 -0.3932735 8.6277009 8.0599917 -1.3932735 6.1988045 1.1916890 10.5422545 9.3045574 2.6941893 7.9353961 8.7165516 9.4631467 10.1841500 10.0318006 8.0371735 9.8834271 4.0661495 8.5536274 9.7100089 1.7766515 NA 10.8310243 7.1419967 11.5989513 12.3764557 7.6235296 9.7596397 12.2260241 9.5818525 3.2505827 0.9286546 0.6067265 2.9990439 8.6249212 10.5964703 8.2505775 -0.3932735 8.5708454 5.1613113 9.4747719 6.1841494 9.5667231 NA 11.2128950 3.8921190 3.0661581 9.8387402 6.6887105 2.6067265 10.9127828 7.6179486 5.1145170 3.3616140 13.3679087 -0.3932735 11.5538101 NA 7.9059291 3.7766409 8.1005767 8.8112922 13.945181 5.489363 8.777898 12.169321 9.736648 11.011330 12.758530 12.428694 9.782271 10.557641 12.712793 9.294097 8.995815 10.345658 3.414081 7.078396 11.208492 10.9971588 8.1164963 8.9499069 8.8932788 8.9398765 9.9601491 7.7741393 5.6179479 11.2910314 7.7766462 -0.3932735 7.5982431 7.2266106 10.1732509 9.3320874 6.8063937 9.3303820 12.3903333 4.9817613 12.5534657 11.3467126 10.4759294 9.9871821 11.1610701 9.5739474 10.6259643 8.9173339 NA 9.1646443 3.1302884 10.9858286 7.3106246 10.3456578 10.1115401 7.5376952 12.8846623 10.6572500 9.9127828 12.9967557 10.0470713 8.6701162 1.7766515 TCGA-EW-A1P6 64 0 NA 562 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 2 white hispanic or latino NA NA 2 3 NA NA 1 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 10.21623088 9.62773432 11.71275422 9.26419908 8.58761627 8.65734382 10.59503868 8.91469457 8.79948109 12.42471266 10.62386915 10.22837331 6.10417309 12.63471382 3.16926762 9.04180642 6.08180403 8.21879570 8.19814837 12.98361430 5.78224342 13.45528154 6.16926762 9.52153154 12.16262213 4.86316537 -0.91811503 9.02871086 9.93745180 -0.91811503 9.00958260 6.50806888 NA 5.08180403 9.59157957 9.88996446 10.26667997 10.56006863 10.07615809 11.29064862 0.08174865 12.61768746 14.06140843 7.44891334 10.15125443 11.54762609 10.70705684 4.03600213 NA 9.02431913 11.17092402 NA 10.66911333 5.66676795 5.25173045 3.93978135 10.18246698 11.61902301 10.74269191 12.32006006 12.81238088 7.44374836 11.02395252 10.43623036 10.95447951 10.84086052 4.36721029 11.60414093 11.34712664 -0.91811503 10.01844251 10.50439505 4.23317482 5.25173045 11.04758889 10.73150988 10.11729102 11.41970521 6.24167623 9.37297538 12.09617384 12.06051508 9.98191671 9.60144081 0.01922300 0.01922300 -0.00609040 -0.01216200 -0.01216200 -0.03231400 -0.01312700 0.30489000 0.28791000 -0.71942000 2.60630000 2.74080000 0.01433000 0.00853190 0.00000000 0.00000000 0.00000000 0.04145800 -0.03124000 -0.01566700 0.01181800 0.03580600 0.04386500 0.04386500 0.04386500 0.06471700 0.05533600 0.05533600 0.13376000 0.01922300 0.01922300 -0.01078400 -0.01216200 -0.00733390 -0.03231400 -0.01312700 -0.01312700 0.30489000 0.28791000 0.28791000 -0.00678130 -0.01050800 -0.71942000 0.00736090 0.00736090 0.00736090 0.00736090 0.00853190 0.00853190 0.00000000 0.00000000 0.00000000 0.00000000 0.04145800 0.00055459 0.00055459 -0.01532900 0.01181800 0.02134600 -0.68131000 0.04386500 0.04386500 0.00736090 0.12550000 0.05533600 0.14221000 0.01656500 -0.66836000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 0.000 8.84501702 12.74402792 8.57965649 9.12619880 3.00875578 10.28942909 2.25171909 NA 8.37412616 7.88270479 0.08174865 8.36845495 0.08174865 10.32913874 9.30701201 0.66675659 8.81989678 9.17059284 10.76260362 10.82158522 8.67396269 7.67051958 9.23535658 1.08181681 10.32378775 8.96291856 8.20333821 NA 10.32140311 1.88916200 12.91528771 12.21028234 6.67426149 10.01991398 7.11522785 9.38444359 2.25171909 0.66675659 NA 10.08883182 10.04397765 9.44374836 9.83752670 1.08181681 8.25313175 6.60536691 10.78700500 5.97662255 9.42610055 -0.91811503 11.36547176 1.88916200 3.25173424 9.85687990 6.96420338 6.65923386 9.11522759 8.68171736 9.10000470 2.08181681 13.84698709 0.08174865 10.09791650 NA 9.08321284 4.08180829 8.13165327 9.33801341 12.700421 4.474124 8.863164 12.634714 10.161956 10.212375 12.983614 12.806851 9.338013 10.724759 12.120724 11.113850 9.024319 8.530953 2.541242 7.381012 11.521635 10.991323 6.895586 9.080395 9.745363 8.916276 10.569725 6.533015 7.863164 10.623869 7.047589 2.782241 4.725659 6.940408 10.820741 10.115228 9.611801 8.909941 10.955249 6.761285 11.296276 10.266680 10.396388 10.016233 11.800337 9.731959 10.416078 9.154607 NA 9.235990 7.047589 10.669113 7.628699 10.396388 10.182467 7.315424 13.900886 10.280863 10.323192 12.246083 10.816091 9.871338 2.251719 TCGA-EW-A1P7 59 0 NA 915 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 2 4 NA NA 3 5 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 10.8065309 9.9416987 11.6577473 9.8897709 8.4467682 9.5515427 9.2282215 10.3653628 11.7046594 12.2810088 11.1690269 10.6046637 1.7273977 13.2106915 3.4822675 9.9543938 6.5217951 9.1067579 9.0627699 8.0493078 0.7273542 9.5938858 7.3820153 9.7281894 10.0821799 4.8148426 NA 13.1686852 9.3198365 3.3123457 9.0650014 8.4722136 -1.2726458 6.2111952 10.2991322 10.2991322 9.3494314 10.6935244 10.3775337 10.4646269 5.8148426 9.4015718 15.6458352 8.3965127 10.1127027 11.1638309 10.5814688 4.8771258 -1.2726458 9.4578497 11.0374242 NA 10.7142882 7.7690384 8.0738931 5.9172050 9.5266612 11.3730380 10.1780753 11.9348515 13.1749794 7.7497474 10.6992823 10.4715785 11.1985467 11.1465497 5.1868095 11.6835742 9.3448469 0.3123167 10.8979306 8.8345965 3.9722699 6.8720383 10.7153541 10.7840172 10.2602225 9.4663161 3.8566670 7.8306673 13.5905011 12.5155881 9.8840946 9.8739482 0.0811770 -0.0213380 0.0982700 0.0105110 0.0820430 -0.0707870 -0.0553640 0.0912030 0.1143300 0.0391950 0.0391950 0.0391950 -0.0654470 -0.0654470 0.1112500 0.0341130 0.0341130 0.0831980 -0.0026591 0.3225300 -0.0378980 -0.0646430 -0.0454990 -0.0454990 -0.0454990 0.0414580 0.0414580 -0.0566230 0.0167050 0.0535210 0.0811770 -0.0015243 0.0105110 -0.0689310 -0.0707870 -0.0553640 -0.0553640 0.0912030 0.1143300 -0.0456180 -0.0540160 -0.0721470 0.0391950 0.0252500 0.0252500 0.0252500 0.0252500 -0.0654470 -0.0718730 0.1112500 0.0341130 0.0341130 0.0341130 0.0831980 -0.0026591 0.0265140 -0.1420700 -0.0378980 -0.0646430 -0.0677410 -0.0454990 -0.0454990 -0.0590000 0.0414580 0.0414580 0.0167050 -0.0667880 0.0907200 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.439047 13.816996 4.427821 10.078871 7.856920 11.780796 8.221235 2.312346 8.401572 9.246033 5.534734 9.166265 5.102419 9.583805 9.616123 2.049317 11.417596 9.473894 8.100244 8.420866 9.286470 7.672823 12.468530 3.936836 8.956198 11.115666 4.119696 -1.272646 11.193456 4.312338 13.288608 11.825741 8.485603 10.632767 9.995337 8.626737 4.119696 1.727398 1.312317 2.534734 8.779947 10.042529 8.487268 7.822777 10.213848 6.003503 9.793469 5.825412 9.635772 1.049282 12.263627 4.455301 4.727381 9.229207 6.516130 9.673555 10.221235 9.160965 10.531914 2.897299 13.779650 1.727398 10.676112 NA 9.641765 5.877126 7.485603 8.492251 13.789505 7.026588 8.082731 13.210692 11.266538 10.460819 8.049308 10.998551 9.447624 11.376411 13.647872 10.702869 9.457850 8.113242 1.312317 7.566583 10.729843 10.977086 5.186810 9.428686 8.985946 7.727379 9.652563 10.031731 8.914732 11.169027 10.078871 -1.272646 8.147340 6.963777 13.201592 11.512423 7.904799 9.170323 10.271378 9.405980 11.297128 9.349431 10.311872 9.800182 11.143649 10.779268 10.564613 8.990649 NA 9.670422 10.942002 10.714288 7.304809 11.265813 9.526661 7.600824 14.550896 9.879030 10.813516 11.694966 11.193201 9.364004 3.250946 TCGA-EW-A1P8 58 1 239 NA breast stage iiic t2 n3b m0 female 2010 NA no infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 NA NA 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 8.6005522 8.8573568 10.8896048 8.4797366 8.3125250 8.7255282 9.4356142 10.2480806 10.5898558 12.6680526 10.8419447 10.2442487 1.6896570 11.7043003 1.1046721 11.2521143 7.3683580 8.5517805 8.7389033 4.5641281 1.3271125 11.7349645 10.7101769 9.2079851 11.1314514 3.7676654 -0.4803575 9.4615161 11.5617362 2.1047057 9.6438562 7.6896598 3.2201752 4.1344427 9.3597258 11.4719301 9.4046686 9.9657843 9.5972183 10.7661786 4.1921626 6.4504723 14.6358351 9.5201857 9.9115154 10.3609061 9.9724909 3.5197306 NA 9.2044836 9.9034392 NA 8.5140883 4.7676601 7.1527300 6.9750627 9.4326242 12.0878097 10.4408320 11.7126441 12.2325843 7.1121924 10.4905598 10.2289436 10.4688320 10.5861605 3.8772829 11.7462976 6.3010937 1.1046721 10.7844707 9.6236783 3.4009068 6.5476411 12.1557930 9.7818297 10.0150902 9.2000943 0.8416511 8.9227470 12.4866909 12.8289981 10.4786500 9.8022441 1.61300 3.30150 0.37216 -0.40042 0.40427 -0.38929 0.48940 0.42198 0.39330 -0.39819 1.62780 0.38105 0.39031 0.45547 1.14620 0.41705 0.41705 1.48460 -0.38862 -0.39853 -0.38750 -0.39686 -0.35350 -0.35350 -0.35350 -0.32832 0.41999 1.14160 -0.38653 -0.36397 0.40244 -0.39564 -0.39297 -0.40274 -0.38917 -0.39689 -0.39689 0.42198 0.39330 0.38915 0.41095 0.40611 -0.40517 0.40561 -0.38728 -0.38728 -0.34400 -0.39096 -0.40031 -0.39352 0.41705 0.41705 0.41705 1.48460 -0.38862 -0.40230 -0.38817 -0.38750 -0.38100 -0.38347 -0.35350 -0.35350 -0.42141 -0.32832 0.41999 -0.39375 3.65690 -0.37065 -0.001 -0.391 -0.394 0.024 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 -0.328 0.092 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 0.000 -0.001 -0.391 -0.394 0.024 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 -0.328 0.092 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 0.000 8.3699218 13.3515369 3.6072001 9.6758179 2.9120558 12.5876734 1.1046721 4.1046973 9.6045432 9.7611222 6.4681027 7.9492460 6.4739314 10.2775415 8.8783860 3.2746195 6.8051377 11.2309716 6.0511154 9.7151071 8.7741730 7.5911969 12.6478098 4.4266271 6.9626786 9.8022441 2.4266136 NA 10.5229014 -0.4803575 13.4592223 12.2570879 7.4115186 9.7794781 9.9254082 10.0976357 3.8416612 2.1047057 -1.4803575 NA 8.4797366 9.4326242 7.8074470 4.3010974 9.8809988 6.7533545 9.9163396 4.2476541 9.3660087 6.3076380 12.1241723 2.3270837 3.3270837 10.1902317 7.9244723 4.3526244 8.8062928 8.6983998 6.3076380 0.5197432 13.3609061 1.1046721 10.8060039 NA 9.2729516 1.9791839 8.6373780 7.8280736 12.632419 8.910978 7.636079 11.704300 9.521847 11.137891 4.564128 6.612493 9.548629 11.760973 14.340313 12.249249 9.204484 7.762909 1.104672 7.623023 9.975062 11.2533858 1.9791839 9.2079851 8.7144918 9.0255466 9.9954075 7.7291884 4.2476541 10.8419447 9.1093859 1.8416511 8.7449425 8.4441316 12.2667740 11.1781695 7.6151315 8.4326242 7.8794846 5.7958604 10.0354495 9.4046686 10.0481890 10.6643931 11.7446410 10.9644910 10.4103792 9.0791119 0.8416511 11.0983340 6.4206020 8.5140883 4.9626786 10.6943267 9.4326242 7.8706742 14.4375032 9.9755757 10.7596317 12.4666412 11.6993330 8.8629206 4.5641281 TCGA-EW-A1PA 59 0 NA 575 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 1 1 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 7.976338e-07 3.121176e-07 10.581379 9.391582 12.428460 9.669709 8.843256 9.398491 11.051731 10.429665 9.286948 14.453678 10.767122 10.902786 1.203765 12.127805 3.129728 9.974564 5.800670 8.834548 8.203735 13.137056 NA 14.201337 3.203734 9.240458 11.433515 9.108219 2.689165 7.898615 9.713905 2.051720 8.003340 7.890235 NA 5.389601 10.560407 9.494675 9.646678 10.150348 10.395534 11.986569 3.836005 11.913335 14.229843 9.210156 9.772831 11.254671 10.554674 4.129736 5.221657 9.505688 10.316956 NA 10.506602 5.511164 5.904173 4.582249 10.066682 11.561506 9.582246 12.004796 12.918409 8.245941 11.276537 10.616939 11.516617 11.399476 5.436395 12.195965 12.116923 NA 10.456873 8.924834 3.589440 4.969270 9.420965 9.772071 11.555115 9.250313 3.881802 9.799924 12.475898 11.274392 10.169519 9.522955 0.0100060 0.0100060 0.0100060 -0.0018014 0.0037465 0.0157270 -0.0201380 0.0048579 0.0283410 3.6569000 1.4895000 0.0068044 0.0061090 -0.6347200 0.0000000 0.6166100 0.6166100 -0.0027707 0.0175440 -0.6800800 0.0115390 -0.0053992 -0.6487400 -0.6487400 -0.0195890 -0.0305400 -0.0305400 1.6444000 3.6569000 -0.0211550 0.0100060 0.0059700 -0.0018014 0.0157270 0.0157270 -0.6396300 -0.6396300 0.0048579 0.0182780 -0.0635020 0.5786200 0.6099100 -0.6549100 -0.6402900 -0.9491200 -0.6120100 -0.0121620 -0.6347200 -0.0059522 -0.6658700 0.0000000 -0.6475300 -0.6475300 0.0073998 0.0175440 -0.0182160 -0.6358700 0.0115390 -0.0053992 -0.0121620 -0.6487400 -0.6487400 -0.6680900 -0.0305400 -0.6344300 -0.0490190 0.0203430 -0.6562200 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 -0.120 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 -0.120 8.9785217 11.6895638 7.0961258 9.7296467 4.1312520 11.0404161 3.2741275 0.4667576 8.7766242 9.0391535 NA 7.7703672 0.8818212 10.7210102 9.6266403 3.4667707 9.3984915 9.5986259 9.4845053 11.4967462 9.5999796 9.3391873 10.7560193 1.8818212 9.6020508 9.5120736 4.6366942 1.2037650 10.7027831 3.4053661 11.7726406 12.3161740 7.4965159 10.2393584 8.3896012 9.0059277 3.6366942 1.2037650 0.8818212 0.8818212 8.9572855 9.3017666 10.1154261 5.1106263 9.6950586 6.1009755 10.1712490 6.0110886 10.2906669 NA 9.6639857 2.3412457 5.0912598 10.2265295 8.9429077 7.2127230 9.4383124 8.1787226 8.3247499 NA 13.5125286 0.4667576 11.1237896 NA 8.3185180 5.6762223 7.6631660 7.8447026 14.6008617 5.8930345 8.8605169 12.1278047 9.4726648 10.0046344 13.1370563 12.1480073 9.7860798 10.8572962 12.3414942 10.4083056 9.5056879 7.5400180 -0.1182571 7.6433577 13.3380325 11.3636059 7.0765634 8.9850942 10.1929871 8.2590168 10.7702719 6.5471429 9.4854327 10.7671215 5.6232728 NA 6.0315540 8.9131766 11.2149618 10.7598573 8.9505848 8.7490850 10.4229030 7.2261019 12.1086731 9.6466780 10.6182084 10.1356539 11.3070223 9.7186457 11.1217032 8.9041743 0.8818212 8.6347054 8.5220514 10.5066018 5.0517332 11.7494172 10.0666818 7.0110897 13.2825525 10.3407256 9.8519124 11.9895139 10.8726195 9.8257863 2.4667576 TCGA-EW-A1PB 70 0 NA 608 breast stage iiia t3 n1a mx female 2009 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 3.225215e-06 1.040392e-06 9.4310763 8.3570404 10.5285421 7.9401080 8.4755725 9.5244387 8.7302993 9.8014193 11.9003461 12.1226167 9.2684676 9.7159769 1.5382898 11.6352885 2.1757162 10.0434305 7.0229914 7.3823759 8.3225519 4.6162812 -1.6317345 10.4195645 8.3108699 9.5445287 10.6709945 6.5680275 1.3683772 14.1774913 10.4320876 2.0688084 9.2271136 8.1047576 NA 4.0122111 9.1039114 9.1072922 9.1299068 8.7203989 8.7037458 10.4394827 0.6902830 5.3456341 13.6599939 8.8208851 10.4617698 10.1603323 9.5917540 4.5581819 NA 8.8731746 12.5652650 -1.6317345 8.6823721 6.0548550 7.8501550 4.6162812 10.0287972 11.8256082 11.5513705 10.6897200 11.5779612 7.8741668 11.0131131 10.0454144 10.7700351 10.1889335 4.0687912 11.6176171 6.9830654 -0.6317345 11.7301623 8.5231738 1.3916028 6.1692556 11.1915237 10.2247811 9.6497060 8.5320052 -1.6317345 8.1980781 12.0973389 12.0759304 9.9026583 9.8257363 0.5413600 0.5413600 1.4805000 0.0164250 0.5287100 0.4434200 -0.0814720 -0.0556030 -0.0134260 0.3703500 0.3703500 1.2450000 1.0298000 -0.0577890 0.5162900 0.5383700 0.5383700 0.5768300 -0.0368100 1.0034000 -0.0540160 0.3784100 0.4999500 -0.0291750 0.6236900 0.5316900 0.5316900 0.0000000 0.5042900 -0.0550820 0.5413600 -0.0437370 -0.0465830 0.5115900 -0.0804890 -0.0438730 -0.0550950 -0.0572500 -0.0134260 0.0091705 -0.0725410 0.8513700 0.3288200 -0.0304040 -0.0304040 -0.0304040 -0.0355850 -0.0577890 -0.0751140 0.5190900 0.5383700 -0.0538810 -0.1084100 -0.0499780 -0.0395290 -0.0519910 -0.0588660 -0.0595380 -0.0953840 1.0510000 -0.0525310 -0.0402090 -0.0575200 -0.0704020 0.0000000 0.6249700 2.9640000 -0.0502350 0.524 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.000 0.000 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 0.159 0.524 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.000 0.000 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 0.159 8.8092247 12.4641646 -1.6317345 9.3137993 2.8919246 9.7585245 1.9533025 4.7946186 9.2509985 7.2990926 NA 7.3020466 9.8914274 11.4607823 9.8395227 4.3225483 5.0407829 9.3086692 6.1232441 10.0552937 9.8302748 5.5079056 9.1497154 4.4558204 8.5995767 10.1521723 2.2752455 NA 10.6761255 4.2509995 12.7910117 11.7626843 6.2138449 10.1390195 12.1443773 9.4330982 5.5282275 2.0688084 -0.6317345 -1.6317345 9.8024624 10.1249119 6.4127494 0.3683772 9.6919790 7.1098223 9.8379973 1.9533025 9.0416646 -0.0466230 11.2394907 3.3225483 1.6902830 10.4894843 7.6400989 3.0687912 10.7830408 10.6692800 6.2012457 4.2752455 13.5807379 NA 11.3734537 NA 10.0574799 3.1232358 7.8801082 8.8318798 12.059881 10.068362 8.750980 11.635288 11.092799 12.225267 4.616281 7.692536 9.430955 10.412750 13.304901 11.772166 8.873175 9.292426 3.983067 5.577809 9.932029 10.232929 3.412754 8.393495 8.303520 5.794621 8.849156 8.316723 5.717084 9.268468 10.578723 -1.631735 5.263173 10.982479 10.861210 10.798808 5.876151 10.460782 7.533263 6.676695 9.256444 9.129907 10.744481 10.089027 10.391763 9.870193 9.869695 8.044313 NA 9.836608 5.322552 8.682372 3.368349 11.082560 10.028797 7.699563 14.253385 11.510622 10.132813 12.435874 10.697872 8.568028 3.322548 TCGA-EW-A1PC 66 0 NA 187 breast stage iib t3 n0 (i-) mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 1 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.670339e-06 9.363527e-07 9.79717352 9.63466587 11.40858736 8.75734834 9.44128904 9.11704071 9.18040052 9.85693637 10.49682093 13.68901096 10.61273159 10.75734842 2.81874833 13.31955769 2.23379605 9.94390419 7.91185813 7.79297245 11.73303448 12.46548769 3.12131386 13.62188453 7.19494690 10.47428454 11.36525767 6.09673413 1.91184495 10.17893768 12.62196526 1.61230531 7.34648625 6.45101654 -2.08804003 2.15979062 10.57985689 11.42398158 9.16924632 10.27297974 9.34909033 10.04210722 2.71920535 7.53207846 14.47484608 6.95422889 9.35324653 10.78607135 11.23688272 4.66674523 -0.08819339 9.70749218 10.15562744 0.23376538 10.13344549 2.86605734 3.74475313 6.02560027 9.89627684 12.22183205 10.40421235 11.70586804 12.67127851 9.06667665 10.83945120 10.00672454 11.08366068 10.74889499 5.48928602 12.06928431 8.30953320 NA 10.93786305 10.05332696 3.16433577 3.61229352 10.75597571 9.95112018 10.26941040 9.60534543 1.37128005 7.04114111 12.11160740 12.05961982 10.47147444 9.22133481 -0.106180 1.372000 1.264300 -0.189740 1.976800 -0.649730 2.311500 0.000000 0.000000 0.204170 1.527900 0.784480 0.253080 -0.145920 0.245290 -0.185210 -0.185210 0.242180 -0.158490 0.090749 2.350900 -0.658920 1.004700 1.004700 1.004700 0.594760 3.656900 -0.167770 0.772330 -0.106180 -0.106180 -0.164590 -0.171700 -0.669560 -0.682500 0.243810 0.258090 -0.039258 0.000000 -0.009574 0.595810 -0.241800 0.164900 1.105000 0.931240 0.941440 0.119170 0.281210 -0.674170 -0.204730 -0.185210 -0.185210 -0.185210 -0.625030 -0.173980 1.789700 -0.650340 -0.032314 -0.658920 -0.187600 -0.230550 1.004700 0.179050 -0.617290 -0.167770 0.433910 0.122440 -0.261990 0.231 0.231 -0.225 -0.225 -0.174 -0.174 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.174 0.803 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 0.000 0.231 0.231 -0.225 -0.225 -0.174 -0.174 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.174 0.803 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 0.000 7.16452383 13.07015250 6.76048178 10.07990366 3.27327716 10.96595394 NA NA 9.78990935 9.52610814 -0.50307753 6.74790831 4.30417515 10.79144163 9.74909207 7.82325067 4.61229941 10.00560602 7.41369562 11.12420282 8.88799279 7.40970999 10.42780455 1.99931456 8.05268813 9.52656829 1.08181681 0.49682023 10.96764920 0.71922726 12.74623069 13.32105042 8.08053029 9.41568410 11.70586804 9.91783376 4.87764120 0.91188329 -0.08819339 8.05268813 8.35480211 9.42410497 10.21449738 1.99931456 8.72948955 7.32760025 10.42706546 5.32124987 10.38480307 -0.08819339 10.14697514 1.91184495 3.97794845 8.93529384 7.08336018 -0.50307753 8.51641155 6.98600014 2.76983520 3.49682023 13.09394234 NA 10.61792270 NA 7.92308558 4.65332376 8.32760025 8.53847996 8.669248 12.737513 7.086784 13.319558 9.535232 11.306187 12.465488 9.822126 8.819748 10.607087 12.795934 10.550747 9.707492 9.553910 4.744748 8.561115 11.753128 11.509445 4.830722 8.440312 8.570070 10.654799 10.635620 4.900543 2.719205 10.612732 9.706274 2.435415 6.827738 8.872447 9.623525 9.611431 7.451017 9.302565 10.905328 3.233781 10.829779 9.169246 10.041785 10.275993 11.392396 10.314604 10.879085 8.212211 9.606216 9.264001 3.269407 10.133445 7.310602 10.720219 9.896277 7.727242 13.509911 10.627391 10.394162 12.941448 10.642329 9.804401 1.233765 TCGA-EW-A1PD 61 0 NA 424 breast stage iia t1c n1a m0 male 2010 NA no infiltrating ductal carcinoma 2 white hispanic or latino NA NA 1 6 NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.161568e-07 10.35479517 10.49097940 11.32321023 9.45777321 8.57798427 9.00413056 10.95345361 10.38752238 10.61074564 14.76492536 9.15527970 10.86821487 1.43333339 14.02826296 3.85959193 9.21959570 6.08437684 8.67650015 10.61851123 12.58600704 0.01834931 13.12605055 4.18821100 8.79800806 11.41167903 3.71872328 -0.56661319 10.56201971 11.33645473 2.13376078 8.77983982 7.27252995 2.13376078 6.01075523 9.23907004 9.50411782 9.15442524 9.93913767 10.33306062 10.91032538 -0.56661319 10.99961800 15.25147133 8.88468155 10.74279110 11.31558700 11.83166898 5.04803560 6.14068460 9.41346567 10.92392628 0.75522943 11.00318169 8.21796109 5.26621684 5.07718317 9.24068092 12.07695682 9.29828600 12.30359446 12.72291274 7.58307299 11.06313800 10.86251834 10.98599516 10.82268857 5.07718317 11.36849113 11.34171867 0.01834931 10.09109113 9.23260776 3.07717462 4.36406110 10.55226716 10.43403039 11.01640885 9.78426529 2.75525080 9.98214795 12.25440245 11.03021467 9.80455828 9.82886019 -0.53073000 -0.00166290 -0.00277070 0.00889600 -0.01188700 0.52136000 0.51246000 -0.01656700 -0.01656700 0.07771800 0.07771800 1.15510000 -0.00470790 -0.00769550 0.00249690 0.00249690 0.00249690 -0.54462000 0.50359000 0.00000000 0.01140000 -0.00332430 -0.55286000 0.68663000 1.28250000 0.39595000 0.39595000 0.39595000 0.04524100 -0.55737000 -0.53073000 0.00624810 -0.54229000 -0.09015600 0.01321300 0.02511000 0.02511000 0.00972760 -0.01656700 -0.01656700 -0.00207840 -0.56591000 -0.54159000 -0.48123000 -0.48123000 -0.00221680 -0.51527000 -0.00769550 -0.00769550 -0.54209000 0.00249690 -0.53439000 -0.53439000 -0.54462000 0.00166420 0.00166420 0.00000000 0.01140000 0.00402430 -0.00041585 -0.55286000 0.68663000 0.05893700 0.39595000 0.39595000 0.97090000 -0.00193990 -0.01752900 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.513 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 -0.314 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.513 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 -0.314 7.96665599 14.32629572 4.85959193 10.60105781 3.64278243 10.91638603 2.52079937 NA 8.27724694 8.44874117 0.01834931 8.77409980 1.89274073 10.49941531 9.79964832 2.82564318 8.09332195 10.32890141 8.98695526 10.40486960 10.07500308 8.08437791 11.98815473 2.52079937 8.48996393 10.33720788 5.36406460 NA 11.28566051 3.64278243 12.03602494 11.80455820 8.50746762 10.21263499 7.73938774 9.75299824 3.43332004 0.01834931 0.01834931 3.60325246 8.13376592 8.90093170 9.45430608 5.58307374 9.75391787 7.30060515 9.84218658 7.16464551 10.45013436 -1.56661319 11.08617106 1.43333339 4.92517818 9.47023465 5.42756595 1.01827809 9.40271259 8.43050566 5.46674783 1.01827809 13.11313602 1.24068068 10.85591653 NA 8.26937638 6.34621586 8.69776861 9.25907990 12.71540095 8.03880543 8.89582821 14.02826296 10.17886176 10.06404819 12.58600704 13.06700250 8.94568144 10.38424639 12.49756362 11.53135816 9.41346567 8.31444004 0.01834931 7.89889277 11.45621399 11.308883 5.623150 8.123324 8.751869 10.161247 9.909556 5.773176 8.900932 9.155280 7.580531 -1.566613 8.687173 9.066058 12.223471 9.924678 8.320547 8.554860 11.420412 3.956884 10.624024 9.154425 10.596976 9.680067 12.410427 10.405588 10.735394 9.071762 NA 9.075549 2.825643 11.003182 7.615720 10.706247 9.240681 7.630543 13.120592 9.518134 9.592567 12.881959 11.430153 9.798555 1.018278 TCGA-EW-A1PE 56 0 NA 320 breast stage iia t1c n1a m0 female 2011 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 2 3 NA NA 1 1 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.080784e-07 11.028054 10.072814 11.958889 9.940921 8.209234 9.953001 10.937183 9.567579 10.793162 14.013347 11.037903 10.549944 2.594525 12.735286 3.475876 9.898785 6.506467 8.373120 11.179684 13.376013 2.047050 13.685089 7.834436 9.220940 10.732997 7.856371 NA 10.918822 9.044432 1.153935 8.015481 7.326736 -1.653355 6.223114 10.185800 10.512131 8.659479 12.108563 10.033097 11.904658 1.806035 11.916214 14.740087 8.847039 9.683103 11.610599 11.632143 4.575415 2.047050 9.183435 12.598448 NA 11.320473 5.265459 7.118086 5.781223 10.636615 11.656072 10.040519 12.029700 12.676602 8.004808 10.781485 10.508965 11.585001 11.107316 5.141012 11.865003 8.963145 NA 10.480059 8.834436 3.809960 6.585000 10.211556 10.420403 10.079611 9.915977 2.516519 9.868687 13.250242 11.578117 10.363404 9.111467 -0.33214000 0.34974000 0.34974000 0.01810300 0.01810300 -0.33075000 0.00656110 -0.05961500 -0.05265900 -0.11965000 -0.11965000 -0.11965000 -0.00474980 0.00471900 0.00972760 0.00972760 0.00972760 0.00805670 0.00805670 -0.02548300 0.03157700 -0.01178600 -0.68570000 0.00249690 -0.00739980 -0.01656700 -0.01656700 -0.01656700 0.00000000 -0.33214000 -0.33214000 -0.30932000 0.01810300 -0.33075000 -0.33075000 0.01838300 0.01838300 -0.05961500 -0.05265900 -0.06074800 0.01112100 0.00791750 -0.11965000 0.01922300 0.01922300 0.01321300 0.01321300 0.00471900 0.00471900 0.01209700 0.00972760 0.00972760 -0.00024672 0.00805670 0.00805670 0.00805670 -0.02548300 0.02132300 -0.00041585 -0.69378000 -0.68570000 0.00249690 0.01363200 -0.01934400 -0.01656700 0.00000000 -0.02425100 -0.00456950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 8.9695629 13.9725046 4.9613038 10.0074833 4.2484286 10.6025098 1.9315696 -1.6533551 8.1523396 8.8494279 -1.6533551 7.3619832 3.6685276 10.2417925 9.4938008 1.9315696 8.1230288 8.9324974 10.8334310 10.1189106 9.7928729 8.9483666 11.9019041 4.0470323 8.6875587 10.1401993 3.2534901 1.8060353 10.6925556 3.1014820 12.3012467 12.2427391 8.2519832 10.3469481 11.8991450 9.0409538 4.7559878 2.5165195 -0.6533551 4.0745140 8.6331536 9.9399871 10.8835716 3.2045790 7.8805876 6.5609151 9.3352807 7.0574026 9.5302313 NA 13.0838961 5.0608429 5.4126867 9.3317762 6.0934461 7.5897702 10.2613549 9.2138748 9.0453007 4.3465953 12.9894374 -0.6533551 10.0838433 -1.6533551 8.4393530 6.0190213 7.4835869 8.4059405 13.511660 5.401880 7.995852 12.735286 10.615138 10.275114 13.376013 12.381223 9.430527 11.053524 13.286772 9.087220 9.183435 8.404588 -1.653355 7.101483 12.281116 11.1924780 7.9240250 8.8652492 8.6775128 8.8632809 10.5049722 7.8142018 8.4300753 11.0379033 6.5462679 0.3466449 5.0330970 8.3673121 10.9476703 10.7292200 9.1031522 8.7172833 13.8052269 8.1999054 11.6172928 8.6594790 10.9702489 9.9362472 11.7156480 10.5474946 10.9138390 9.5980784 NA 9.9877446 8.5401215 11.3204727 7.3661867 10.3954234 10.6366148 7.2978810 12.0780211 10.2242635 10.3978049 13.4115071 10.1098083 9.4803805 3.2045790 TCGA-EW-A1PF 50 0 NA 439 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 4 1 NA NA 1 4 2 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8212032 10.3464109 11.6727981 10.1009734 7.8939404 9.1566113 10.4770832 9.6834126 10.2206625 15.2449968 10.3709242 10.8306409 -0.4745324 12.4686816 3.3834140 9.5394547 5.4912182 8.5268423 9.3018672 12.5797841 -1.4747329 12.5867210 4.5698313 9.0516889 10.9485500 7.4738015 NA 9.8085225 9.2977488 1.5254174 8.3677847 7.5861305 -1.4747329 5.8473631 10.1484011 10.3226904 7.9432867 11.6672220 10.3799130 12.0485060 3.6547219 10.6585764 15.3158972 9.2062508 10.5016403 11.4126548 10.7974807 5.0011672 7.8719477 9.1969753 11.4400061 0.1103632 11.2796954 5.0172895 6.1978595 5.3067945 9.9714836 11.3561474 9.9364155 12.4485759 12.8242127 8.3927128 10.4285628 9.4566591 11.3685701 10.8846346 4.7733634 11.5025352 11.8792702 -1.4747329 10.5622946 8.8829863 3.0521376 5.6234660 10.4202520 9.7840002 10.4879687 9.9198969 2.7733634 6.9432873 12.6851478 11.1940976 10.4046345 9.5289520 1.2240e-02 1.2240e-02 -4.1421e-01 -8.0002e-04 3.4257e-02 -1.5643e-02 2.9574e-06 2.3241e-01 -1.0505e-02 -4.1761e-01 1.8060e-03 4.4139e-01 0.0000e+00 8.1989e-03 -4.0384e-01 -4.0384e-01 -4.0384e-01 7.5030e-03 4.7219e-03 -4.1981e-01 -4.1531e-01 1.0706e-02 -3.9241e-01 -3.9241e-01 1.6987e-02 -3.3848e-02 -3.3848e-02 7.9220e-01 5.1944e-01 -3.9541e-01 1.2240e-02 -4.1761e-01 -8.0002e-04 1.5730e-02 3.9413e-01 2.9574e-06 2.9574e-06 4.3414e-02 5.3240e-02 -4.6743e-03 -4.8432e-03 -5.6728e-03 -4.1761e-01 -6.1686e-02 -6.1686e-02 -6.1686e-02 -6.1686e-02 8.1989e-03 3.1540e-03 -4.0384e-01 -4.0384e-01 -4.0873e-01 -4.0873e-01 4.7219e-03 4.7219e-03 4.7219e-03 -4.1849e-01 -4.1531e-01 1.0706e-02 3.2425e-02 -8.0360e-01 -3.9241e-01 -4.1937e-01 -8.2532e-02 -3.6804e-01 -3.8439e-02 -1.5214e-03 5.8655e-02 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 9.6934795 13.9597366 7.8675086 10.4883301 4.3834140 11.8677867 4.6751836 0.1103632 8.1309139 8.4839870 0.1103632 8.4997626 2.9848627 10.5488420 9.2405381 1.3327938 9.0102570 9.5935407 8.6391764 10.1889923 10.2053100 8.8630560 11.6657846 3.3834140 9.4620722 10.1433608 4.7733634 1.6953703 11.1063993 2.3327938 11.7470213 11.7221899 8.5041444 9.7409672 8.6751812 9.4635436 4.8829853 1.6953703 -1.4747329 1.6953703 8.9899800 8.9166779 10.4465313 4.4080800 10.3788919 7.4998491 9.5491886 6.9305753 9.7361056 NA 10.4919397 3.9848627 4.7348884 9.5952330 6.8879042 5.4796315 9.4027183 8.7177271 9.7703925 1.5254174 13.4315732 1.3327938 11.1778310 NA 8.3927128 5.9848650 8.0548648 8.7733618 12.319748 6.169290 8.991001 12.468682 9.428563 9.528952 12.579784 12.814589 8.559766 10.870562 13.019852 10.455432 9.196975 7.473802 1.332794 6.860825 12.658416 11.469414 7.270268 9.025280 8.966303 7.539454 10.471843 7.533863 9.202273 10.370924 7.300222 2.917756 6.140145 7.914657 11.870839 10.379523 8.058764 8.725106 12.542068 6.943287 10.304850 7.943287 9.873056 9.100028 11.484712 10.649555 10.881336 9.356741 -1.474733 9.853060 7.106635 11.279695 8.017287 11.548669 9.971484 7.332789 13.341368 9.987936 9.513409 12.614222 10.460231 9.612897 3.110397 TCGA-EW-A1PG 53 0 NA 1051 breast stage iib t2 n1a mx female 2008 NA no infiltrating lobular carcinoma 1 white hispanic or latino NA NA 2 4 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 3.467973e-08 10.8791432 10.3220526 11.6174624 9.9005666 8.0952952 8.9721467 9.4749272 10.2571013 10.6778267 12.4364757 10.4760469 10.5692262 3.6034424 12.8284302 3.6034424 10.9573907 7.9187977 9.0097435 9.9784814 12.3692177 2.7289653 12.1555870 5.8854767 9.1474438 10.2407255 6.9319123 -0.8559536 7.6870418 9.2407255 3.7289762 8.1884044 10.1418955 0.1440464 4.6034424 9.9776911 10.5352539 10.0019913 11.3731295 10.1482307 11.4880287 13.3906025 10.2629514 15.0901627 8.3101233 9.5331039 11.3886715 11.8831580 4.2732921 2.6034305 9.6587244 13.1626452 NA 11.7916936 5.8719299 5.6831687 3.9513640 10.5581670 11.9142612 9.9376136 13.3571905 13.1365947 7.6278264 11.1639484 11.0129717 11.3815191 11.5563155 4.8444509 12.1798404 12.3347610 1.4659222 10.6923506 9.7596399 3.8466638 4.6986019 10.9121946 10.6029295 10.4999119 9.7887679 3.1440137 9.2668383 14.2979581 13.6561952 9.0879902 9.1965783 0.07988000 0.07988000 0.07988000 -0.00110870 -0.00110870 0.00041593 -0.00249380 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00708260 0.00708260 0.00241190 0.00241190 0.00241190 0.00000000 0.00000000 -0.00401620 0.13746000 -0.00581400 -0.01821600 -0.01821600 0.13288000 -0.00816240 -0.00816240 -0.00816240 0.00069327 0.07988000 0.07988000 -0.00296590 -0.00110870 0.00041593 0.00041593 -0.00249380 -0.00249380 -0.00166290 -0.00166290 -0.00166290 0.00097064 -0.00752000 -0.00166290 0.16513000 0.16513000 0.16513000 0.16513000 0.00708260 0.00708260 0.00241190 0.00241190 0.00241190 0.00332990 0.00000000 0.00000000 0.00000000 -0.00401620 0.13746000 -0.00581400 -0.19262000 -0.01821600 -0.01821600 0.00069327 -0.00816240 -0.00816240 0.00069327 -0.00429290 -0.01477800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 0.000 7.9800607 13.0656653 7.4568932 10.3139353 NA 10.4172231 1.4659222 2.1440137 8.4568932 7.8340083 2.7289653 8.3318078 1.7289653 10.5781172 9.2047061 0.7290089 9.0297066 9.7760967 11.1184249 9.1198583 9.5005943 7.6116158 11.5959941 4.4294151 9.1566348 10.2525348 5.9384269 -0.8559536 9.9253700 3.8444459 13.1791530 12.0738235 7.6714873 10.2407255 7.6675721 9.7779138 4.8164359 0.7290089 1.1439811 6.0747473 7.6318500 7.7513405 8.6656106 5.0266540 6.7062529 5.8444509 9.8719308 6.3824148 9.5255533 -0.8559536 11.0232106 5.4477908 4.5363265 9.9606341 5.4980402 4.5702747 9.9392383 7.7550351 7.0143754 1.9513640 14.0057273 NA 10.3637839 NA 9.7577998 4.9253681 8.3680118 8.1580310 12.7993554 4.3139351 8.5037598 12.8284302 10.0887224 10.6493256 12.3692177 12.2004787 9.2301466 10.9224982 13.6410513 12.6501939 9.6587244 9.5341793 -0.8559536 7.6034416 11.1155538 11.3827136 5.8988976 9.4534867 9.1691498 7.1155535 10.2428780 4.8719323 5.8988976 10.4760469 6.6518051 5.8854767 7.6518051 5.2720568 13.2725686 10.3565067 9.3716262 8.0688229 11.9117810 5.5534004 11.9044704 10.0019913 10.5869538 9.6438562 11.2652200 10.1454185 10.8093462 9.7457810 -0.8559536 9.2315128 6.9319123 11.7916936 7.6909045 11.1803694 10.5581670 7.0569000 14.4758020 10.2148021 10.6408641 13.7621090 10.2400666 9.6024170 0.1440464 TCGA-EW-A1PH 52 0 NA 607 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 4 5 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.040392e-06 2.427581e-07 9.7961191 8.9490572 11.0175926 8.6562754 9.1361711 8.5822749 9.3471713 10.5378702 10.0685731 13.3148440 10.1985334 10.9342602 3.5713856 12.6147867 1.9864109 8.1175797 6.7019177 9.2029495 10.5635095 -0.4729297 NA 8.0525132 8.9106967 9.5320485 11.3942712 7.1708484 1.3343394 8.6024717 11.6540195 1.9864109 7.6792774 7.2684597 -1.4731299 3.6144507 9.0017125 10.7379681 10.4963790 9.1636170 9.2108644 10.6127968 0.5269702 7.0347869 13.9899100 7.5597549 9.9699307 10.9350567 10.0012054 3.7364425 -1.4731299 9.8729520 9.6918993 NA 10.7509941 5.9448444 6.8170118 4.6969175 10.0815813 11.9643544 9.7914350 11.4628941 13.2885956 6.7890876 11.1796134 10.8934321 10.6808611 10.7294224 4.5269952 12.2470229 10.7766985 6.6302802 9.5206385 11.3695392 3.0511807 4.3598796 9.4495768 10.1222499 10.6843393 10.3981276 0.8489584 9.1949910 12.8944754 11.2797912 9.7509942 9.6741974 -0.2392400 0.3145000 0.5512400 0.1250500 0.7111400 0.6097300 -0.4295600 0.7817600 -0.0156040 3.6569000 -0.9652400 2.1270000 1.0319000 -0.0065050 -0.0223320 -0.0223320 -0.0223320 0.0058309 0.0058309 -0.2733200 -0.4477100 -0.4338700 0.0188030 0.6527700 0.3637900 -0.1828200 2.8868000 -0.0972320 0.4006100 -0.2407000 -0.2392400 -0.4644000 0.1250500 0.0151680 -0.3878300 -0.6551100 -1.2929000 0.7817600 0.1631000 -0.0161540 0.0079175 -0.0580580 -0.5454200 0.4188100 0.3966200 -0.1551500 -0.1911200 -0.0065050 -0.0065050 -0.3745900 -0.0223320 -0.0223320 -0.0223320 0.0058309 -0.1921200 -0.1921200 -0.2480000 -0.4487000 -0.3134200 0.0493980 0.0075000 -0.2125500 0.0987060 -0.4645100 -0.0972320 0.0125160 0.4754700 -0.4680300 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.177 0.000 0.420 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.111 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 0.000 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.177 0.000 0.420 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.111 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 0.000 7.4695067 12.9171614 7.3407732 9.5255829 2.6321751 11.4212418 1.9864109 6.9657843 8.9363832 11.0483475 6.4157350 9.0593482 5.7937789 10.6614187 8.8341932 3.2818763 6.6511134 10.7525012 5.8933137 9.3934986 9.0662870 6.4695067 10.6852865 -0.4729297 9.5493602 9.1780441 7.1157075 NA 10.2536363 5.1563481 13.3787415 12.9032535 8.9771726 10.4506913 12.4487404 12.2328408 3.1119494 0.5269702 -1.4731299 7.5659117 8.0407199 9.6665438 7.9363835 8.0108084 7.5082741 6.4035097 10.4316270 5.3598831 11.0340437 5.3973580 10.4289906 3.1708544 4.7364479 9.6150453 6.3396184 6.1994172 7.6767399 7.2099875 6.7749201 8.1563491 14.3436261 1.3343394 10.8795877 5.8398765 10.3197827 4.7364479 8.5368211 8.4338829 12.1951162 10.7355317 8.8307731 12.6147867 9.6918993 11.2758143 -0.4729297 10.3744414 9.1444599 10.6959779 13.5429301 11.3722865 9.8729520 8.3132622 1.8489183 9.5700198 10.2321928 11.098508 4.308354 8.945899 8.977173 8.980263 10.085471 5.593082 4.170846 10.198533 9.893315 2.334339 8.593081 8.698607 11.917161 10.051044 8.288544 9.384196 6.884544 7.156349 10.990246 10.496379 9.735836 9.698795 11.583630 11.455326 10.513901 8.770166 1.334339 9.032893 7.115707 10.750994 6.676740 10.554971 10.081581 6.876031 14.285398 10.296417 10.679277 12.289790 10.912316 9.948531 1.696929 TCGA-EW-A2FR 59 0 NA 1673 breast stage iiic t1b n3a mx female 2008 NA yes infiltrating ductal carcinoma 19 black or african american not hispanic or latino NA NA 2 6 NA NA 2 2 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 2.080784e-07 9.8382851 10.0749232 11.0892944 9.5035372 8.1392628 9.4169311 8.3435633 10.8790650 11.1041136 13.9795386 9.4969646 10.6391426 -0.7372061 17.4990428 3.4326655 10.2450265 4.0956375 8.9855534 6.4963649 11.3671809 -1.7374466 11.5846740 5.4624188 9.4977788 9.6973742 4.6377841 NA 11.5842654 11.4196190 3.1207335 8.9864070 8.1711388 -0.7372061 5.5846739 9.7155020 10.5753452 9.7505859 10.2256419 9.8486474 10.9334022 12.5836169 8.9544895 15.9753468 8.4205856 9.8843400 10.9936405 11.0719111 5.5106740 4.9209554 9.0547226 11.2994347 2.1696364 11.4565792 5.9422259 6.6377856 6.0042137 10.1916343 11.5998102 10.3865440 12.3602020 12.6941129 8.5400335 11.2778124 10.3291378 10.9289699 10.5094865 4.4525691 11.1373431 10.3458928 -0.1523237 10.6301606 9.4054912 3.0187054 5.6973735 10.9904537 10.2913427 9.9240787 9.4891582 3.3920289 7.6180969 13.1464870 11.8353277 9.7216650 9.7799232 -0.2563600 0.1651600 0.1670000 -0.1409100 0.0559430 -0.1178300 0.0546600 0.0548030 0.0542820 2.0601000 -0.3145200 0.0055529 0.0161460 0.0161460 -0.1115500 0.3047300 -0.2857200 0.0480490 0.0803120 0.0000000 -0.1557900 -0.1009200 -0.1153500 3.6569000 -0.0809400 0.3747900 -0.2556400 -0.1006600 1.9310000 -0.2563600 -0.2563600 -0.1200400 -0.2852500 -0.1178300 -0.1178300 0.0546600 0.0546600 0.0548030 0.0542820 0.0542820 0.0682350 0.0494370 -0.4701400 -0.1076200 -0.1076200 -0.1076200 -0.1076200 0.0161460 0.0161460 -0.1115500 -0.2785800 -0.2613100 -0.2613100 0.0480490 0.0803120 0.0803120 0.0000000 -0.1356100 -0.1009200 0.0777180 -0.1153500 -0.0809400 -0.1212100 -0.2407000 -0.1886100 -0.2624000 0.4527500 -0.0941960 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 0.000 9.8765354 15.9721259 7.2934128 10.9439843 3.6478325 11.3660337 1.7221600 1.4326922 8.3220904 10.4822169 5.0701016 9.9575390 3.2627488 10.8002070 10.0688927 5.4525691 8.6059317 9.2045271 9.7615951 9.4162978 9.2643863 7.3868670 12.1255769 1.5846739 6.6890112 10.0197191 2.7863036 NA 10.9054746 1.9631782 12.3706168 12.3920289 9.4181967 10.1923742 8.7705407 9.2920331 6.1514895 1.9631782 0.8476763 2.9066020 8.5248406 9.3640650 9.7369588 4.5106708 10.1883225 7.6763739 10.1141045 6.5481484 9.3362180 -0.1523237 9.3200609 3.7545989 3.9351674 9.4521442 5.9935227 6.2627451 9.8589357 8.5653847 8.0956360 3.7545989 13.8950027 1.0701145 10.6989369 NA 8.0126156 4.8019036 8.8598674 8.6827060 12.4359624 6.8134926 8.7108622 17.4990428 10.3378908 10.6829693 11.3671809 10.5742104 8.6763739 10.5975778 13.3640650 7.9011819 9.0547226 8.9898154 0.5846739 7.1875579 11.8005710 11.664959 4.963187 8.428909 9.406767 8.323442 10.405906 7.142329 7.312594 9.496965 7.123833 4.529534 9.502344 7.419866 12.728822 10.057974 8.706725 9.244313 9.608151 5.976991 11.198368 9.750586 10.269423 8.980422 10.949465 10.364393 10.310211 8.947495 8.122281 9.824444 6.257099 11.456579 10.241814 10.583969 10.191634 6.762592 13.587102 10.010939 10.123445 12.202141 11.087108 9.343563 2.963178 TCGA-EW-A2FS 41 0 NA 1604 breast stage iib t2 n1mi mx female 2008 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 3 1 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-07 10.2210414 9.1261082 10.7902316 7.2965648 10.2481246 9.7621699 9.8453505 10.5473550 9.9129404 14.2083526 11.2045893 10.4543408 2.5686402 13.0190181 2.8165792 8.4125656 6.8118191 9.4133502 9.7448177 12.7743614 -1.4312869 14.1973178 3.0280740 9.7164855 11.2102447 8.0260254 2.1536108 12.0287816 9.0694863 2.3760125 7.7435702 6.8022643 NA 5.8447698 9.1879473 9.6817354 9.3679260 9.7190265 9.8534686 10.5027038 3.9609657 11.1608679 14.2336472 7.5042223 9.9045931 10.8689971 10.7640167 5.1685578 6.0604971 8.9118303 9.8837940 -1.4312869 10.4623252 4.8354289 6.3368297 3.8165690 10.1554843 12.3234276 10.5173767 11.5295514 13.4638411 8.1629693 10.8040604 10.3389037 10.7199782 10.4409346 3.6979295 11.5328048 11.0771821 -0.4312869 10.4837769 8.6184931 4.1572054 4.2410698 10.3844281 10.3739853 11.1909251 9.6849884 1.8905634 6.5111596 12.0163735 11.8168686 9.4573877 10.0892631 -0.083465 0.350390 0.350390 0.092895 0.235500 0.145180 -0.091420 0.000000 0.000000 0.040326 0.040326 0.040326 0.110670 -0.473320 0.090430 2.635400 -0.477540 0.057967 0.057967 -0.192080 0.114620 -0.102240 0.163700 0.163700 1.366600 -0.215280 -0.215280 -0.215280 0.146070 -0.083465 -0.083465 0.071966 -0.387500 0.145180 0.145180 -0.091420 -0.091420 0.000000 0.000000 0.000000 0.048120 0.048120 -0.490470 -0.156510 -0.156510 -0.156510 -0.152850 -0.473320 -0.473690 0.090430 0.065226 -0.481340 -0.481340 0.057967 0.057967 0.097252 -0.192080 -0.477540 -0.102240 -0.274610 -0.473420 0.163700 -0.081472 -0.215280 -0.215280 0.066564 -1.087400 -0.458960 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.157 -0.157 0.000 0.000 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.157 -0.157 0.000 0.000 9.2223853 11.1253900 4.3235286 9.2931582 5.2140859 11.2601699 3.8165690 0.8905634 8.5840594 6.5228404 0.1535460 7.6427860 4.9780354 11.3587893 9.1222738 6.2690837 8.7902315 9.5784731 7.8424402 10.7332372 10.2520690 7.7310359 10.4971629 2.8165792 8.1058629 9.9068237 6.1980010 5.3235322 11.4351507 5.4266271 12.7938519 12.5560861 7.9588137 10.3206069 9.1611014 9.7658612 5.7974644 3.8905732 2.2690930 6.4695116 9.4882527 10.6461278 10.6431205 4.9084959 9.1170329 8.2375293 10.0813849 5.8354315 11.1708794 NA 9.9689903 1.1536108 7.7584691 10.0859497 6.6189287 8.1833545 9.0912259 7.2828901 10.6283270 NA 14.2913186 1.1536108 10.3699487 -1.4312869 9.1916115 6.9040348 8.9360593 7.2304230 14.792691 6.262131 9.497903 13.019018 10.556974 10.434378 12.774361 13.012106 8.100396 9.919584 13.170415 11.285678 8.911830 9.030124 1.153611 8.294863 12.225516 10.874706 6.748554 8.999076 9.454341 8.333516 10.133018 6.557329 8.681084 11.204589 8.269084 4.350002 9.265612 8.612437 9.562998 10.216103 7.044378 9.984386 8.208889 7.511159 14.827647 9.367926 10.096121 10.127065 12.316837 8.691472 10.124672 7.052460 2.738573 8.833603 8.962035 10.462325 3.568640 11.205804 10.155484 7.599312 13.859527 10.435537 10.537671 11.446695 10.560166 10.064000 3.697929 TCGA-EW-A2FV 39 0 NA 788 breast stage iiic t3 n3a mx female 2011 NA yes other specify 29 white hispanic or latino NA NA 4 1 NA NA 3 4 2 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 10.3654415 9.7803232 11.8889222 9.2728717 8.2775115 8.9431214 9.9846553 10.6355154 10.0527457 14.4027804 10.7671864 11.1974026 -0.2276920 12.5314869 3.0942867 9.7462982 5.1181354 8.7873120 10.5016991 12.7881832 NA 13.5160390 7.6651575 9.3204770 10.8027988 6.6832543 1.1873877 9.2507942 11.4515485 3.3968582 7.2453911 7.2695484 1.3573268 5.7798559 9.9658870 10.5433007 9.5840040 10.0577638 9.9493658 10.8738996 4.6136613 9.2688825 14.4160675 8.0080089 9.4258038 11.0153372 10.7180493 4.1646817 4.8021105 9.3205413 11.6149738 -1.8124856 10.9474953 9.3623248 6.5002826 5.1986277 10.7204854 11.8026839 10.1025315 11.8324946 12.8779973 7.3396844 10.9917318 10.3805641 11.6194189 11.4247585 4.2317933 11.5748780 9.1114693 0.9947245 10.1470389 9.1313791 3.1420539 5.7342923 11.0639160 10.0627645 10.1415954 10.3153935 3.4727997 6.8982059 12.5993072 12.6088065 9.3876848 8.8465030 -0.115910 0.419020 0.412650 0.035552 0.013184 0.110990 -0.145000 0.151470 0.031323 -0.433960 -0.433960 1.585100 0.151610 -0.125800 -0.093112 -0.093112 -0.093112 -0.135720 0.161630 0.119200 0.707990 -0.126650 -0.394730 -0.368930 3.656900 -0.071980 -0.071980 -0.054528 3.656900 -0.115910 -0.115910 -0.133520 0.035552 0.110990 0.110990 -0.145000 -0.145000 0.151470 0.031323 0.031323 0.053692 -0.444660 -0.433960 -0.173760 -0.173760 -0.173760 -0.132480 -0.125800 -0.125800 -0.093112 -0.093112 -0.093112 0.151020 -0.135720 0.161630 0.161630 0.119200 -0.113620 -0.124960 -0.098787 -0.394730 -0.368930 -0.184310 -0.071980 -0.054528 -0.107200 0.109380 -0.391380 0.026 -0.126 0.000 0.000 0.162 0.162 0.119 -0.114 -0.127 0.000 0.000 -0.395 -0.395 -0.184 -0.184 0.000 0.000 -0.116 0.303 0.000 0.000 0.109 -0.391 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.235 0.199 -0.174 -0.174 0.000 0.000 0.026 -0.126 0.000 0.000 0.162 0.162 0.119 -0.114 -0.127 0.000 0.000 -0.395 -0.395 -0.184 -0.184 0.000 0.000 -0.116 0.303 0.000 0.000 0.109 -0.391 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.235 0.199 -0.174 -0.174 0.000 0.000 8.8194855 12.4278923 4.9947562 9.2386080 4.6468308 11.3037431 2.2748580 0.7723924 8.3485308 7.7685999 NA 8.4370816 3.0942867 11.0309277 9.4623595 2.1873877 9.6636390 9.5914762 8.1845783 10.2413250 10.0121551 8.2480950 10.6724737 3.1874035 8.8580553 9.4687497 5.2959250 NA 10.1884553 3.6468308 12.4393253 12.2795781 7.7667151 10.1718175 11.3377810 9.7615195 5.0328899 2.5797112 0.1873877 4.4911797 8.6852509 9.0942897 9.9613624 6.5580870 7.4733794 6.5183164 9.8964829 6.5449505 10.1661096 NA 10.0639160 3.3573268 3.8312591 9.4250812 5.9372008 6.1474003 9.3250306 8.8834974 8.7910255 NA 13.6930866 0.7723924 11.0309277 NA 8.6084119 5.6220284 8.4400644 8.6722220 13.060342 6.362324 8.315393 12.531487 10.441247 10.886755 12.788183 11.640927 8.774895 10.643497 13.421505 10.799576 9.320541 8.830353 1.887837 8.938943 13.948535 10.751787 5.527249 8.897345 7.568942 7.988299 10.334305 6.630343 10.076142 10.767186 5.613664 4.187396 6.695193 8.174535 10.923590 10.462360 8.561352 10.463814 11.138137 6.391970 12.504716 9.584004 10.368241 9.644780 11.444050 10.285431 10.393192 9.416819 NA 9.427296 7.642726 10.947495 5.935592 10.838226 10.720485 7.624486 13.473488 10.732122 10.418920 11.738627 10.447437 9.597320 1.994761 TCGA-EW-A2FW 52 0 NA 672 breast stage iia t2 n0 (i-) mx female 2011 NA yes other specify 0 white hispanic or latino NA NA 1 3 NA NA 1 1 4 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 9.8413756 9.4688213 11.1882534 8.3861811 8.9577080 7.9182998 10.0075891 10.4861446 9.7619743 14.3364117 12.2664012 11.2828720 -1.4258500 13.0248283 2.3813664 8.6786026 7.7687606 8.3570021 11.1999408 13.4658823 1.3813388 15.1361865 -0.4260439 10.3288912 11.3044738 5.9315554 1.3813388 8.4673052 10.6139508 -0.4260439 8.2552420 7.7439289 NA 3.5740046 9.5179837 9.9796770 10.0718556 9.3537231 9.5775215 10.0262450 15.1769635 11.4703361 14.5023138 9.2367433 8.7476808 11.3384606 11.0172062 3.0334406 6.1131629 8.2916800 10.2740098 0.8959230 10.2886785 4.1589671 4.4319839 4.7834567 10.9849850 11.9885568 10.5036320 11.8710632 12.0503702 8.5963717 10.6118938 10.5937160 10.8272603 10.3334758 4.4068904 11.5822572 12.7768162 -1.4258500 9.9636351 8.7501767 2.8249715 4.5282025 10.8541945 10.3989624 10.5873264 8.9138537 2.0334406 4.5512822 10.4797667 10.0497371 10.4323733 8.6786026 -0.86507000 0.76624000 0.79568000 0.00110930 0.02454800 0.02749700 0.01740400 -0.00675160 -0.86066000 0.00861350 0.00861350 0.00861350 0.00027728 0.00027728 -0.01092200 3.65690000 1.41810000 0.01712400 0.01712400 0.00750000 0.02876300 -0.01395300 -0.03313200 -0.03313200 -0.03313200 -0.07361000 -0.07361000 -0.07361000 3.65690000 -0.92461000 0.02174400 -0.55987000 -0.00430470 0.02749700 0.02749700 0.01740400 0.01740400 -0.00675160 -0.86066000 0.02679500 0.02988800 -0.88248000 0.00861350 -0.00995650 -0.00995650 -0.00995650 -0.00995650 0.00027728 -0.02209300 -0.01092200 -0.01092200 -0.86531000 3.65690000 0.01712400 -0.01311700 -0.03232900 -0.00910940 0.00138680 -0.01395300 -0.03476800 -0.03313200 -0.03313200 0.00000000 -0.07361000 -0.07361000 -0.05630700 -0.01202400 -0.06786000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4868929 12.0501170 4.9833950 9.0517620 3.2178666 10.5956777 0.8959230 NA 8.9060404 6.9403253 NA 6.4317366 0.8959230 10.3821635 9.5281999 5.5626881 6.7186616 8.5267449 10.6694007 11.6937554 9.7412587 7.4412826 11.7189805 1.5740046 9.3619063 9.8094196 4.0334318 NA 10.7125954 2.3813664 12.0315128 11.3361780 7.9425104 9.5281999 6.6877452 9.8964953 2.1589509 4.0334318 -0.4260439 1.1589833 10.2774747 9.9908012 10.0743477 3.0975602 8.3812622 7.2033607 10.9531113 5.7338749 10.1854896 NA 8.1131624 0.8959230 7.2813626 9.7215965 5.7116105 1.8959230 8.7588791 8.5121131 10.1309886 NA 13.7847892 0.5739561 11.3590474 NA 7.6427817 6.5908116 8.1053853 9.3405327 17.436556 6.097567 8.486893 13.024828 10.136723 11.512848 13.465882 12.868409 10.703206 10.206090 12.227297 9.489883 8.291680 9.014873 4.480892 7.582433 13.405014 10.6779471 8.0313847 7.7687606 9.1533197 10.3328390 10.3773316 5.3019241 10.0138346 12.2664012 6.2250551 -0.4260439 7.5852307 9.6057256 9.7785748 9.7974021 10.2277444 9.9310057 8.2899658 3.1589671 12.3483347 10.0718556 10.2317687 10.4917487 11.7974021 9.5433901 10.6594761 8.0738497 NA 8.8399350 3.8219347 10.2886785 5.9138540 10.6464713 10.9849850 6.5106423 12.8242281 10.0827888 9.6129227 12.0749700 10.0028873 9.5289270 0.8959230 TCGA-EW-A3E8 60 0 NA 1035 breast stage iib t3 n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 2 2 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.219503e-06 6.589149e-07 10.079481 8.798404 11.395370 7.996532 8.786455 8.932075 10.487533 9.303057 10.637832 12.595259 11.639877 10.078351 1.983714 13.674298 3.385804 9.854072 7.237048 8.653099 10.645740 12.246977 2.263816 13.277384 2.983714 9.398966 10.148973 8.423093 NA 10.186881 8.575096 1.346305 8.870711 6.077219 NA 4.761317 9.773474 9.760845 9.175648 11.658026 9.128366 10.592622 9.181977 10.814336 14.637896 7.776693 11.752601 10.777659 10.618000 4.805710 3.130552 7.964255 10.435507 1.635801 10.300474 5.911061 7.092232 4.551393 9.928315 11.884682 10.543767 11.626662 12.762430 8.083243 10.363705 10.307566 10.441088 10.293671 4.107094 11.503484 11.971276 NA 10.761080 8.549217 3.668845 5.610981 10.095216 9.927897 10.537748 9.056701 3.602623 6.699914 12.851593 12.504466 10.068136 9.565984 0.0045800 0.0045800 0.0174040 -0.0679930 0.0440070 0.0175440 0.0234260 0.0227250 -0.4601400 0.0421660 0.0421660 0.0421660 0.0242680 0.0253900 -0.0719480 -0.0719480 -0.0719480 -0.0561730 -0.0593210 -0.0142280 0.0223040 -0.1645900 0.0197830 0.0197830 0.0197830 0.0000000 0.0000000 0.0000000 0.0153080 -0.0060904 0.0045800 -0.0733430 -0.4527600 0.0175440 0.0011093 0.0234260 0.0234260 0.0227250 -0.4601400 -0.4601400 -0.0414310 -0.0758010 0.0421660 0.0162860 0.0162860 -0.4414500 0.0087157 0.0253900 0.0273570 -0.0719480 -0.0719480 -0.0719480 -0.0714720 -0.0593210 -0.0593210 -0.0575200 -0.0110600 0.0223040 -0.1645900 -0.4938100 -0.4743800 0.0197830 0.0085804 0.0000000 0.0000000 0.0153080 -0.0502350 -0.0044312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 0.000 9.8278527 12.9907848 7.5272917 10.0963332 6.1247189 10.7230059 6.2531686 1.3463045 8.8654769 9.2737264 NA 7.4746899 7.3587470 9.8641656 9.9792727 3.4617512 9.8447944 8.6192960 10.4863972 11.0098356 9.7947473 7.2874880 11.7628405 2.8201994 8.4290179 10.0127974 4.7462106 NA 10.8303172 3.8767920 12.9290990 12.1392485 7.8871591 9.5459498 10.9322833 9.8300933 5.4337407 1.6358008 -0.8236772 3.4617512 9.8580301 10.4099722 10.2565038 5.9312410 8.5627000 8.0343335 9.9841099 5.5513930 9.5546474 -1.8236772 10.1428580 3.9577103 4.9042721 9.2271331 6.3933407 7.1987200 10.2104636 8.3723397 9.5984173 NA 13.6570796 1.7613278 10.3330677 -0.8236772 8.4349184 4.7613172 7.5162027 8.8628530 13.431616 5.699915 8.635784 13.674298 10.399147 9.865477 12.246977 11.130185 9.269440 10.110043 12.872614 10.421608 7.964255 8.478992 1.346305 7.271750 10.009243 10.9040603 7.0218428 8.6047126 8.7901419 7.9666197 10.0603208 8.6510725 8.0358872 11.6398769 7.8646028 0.7612853 7.2451305 7.4559165 10.9628264 10.1731790 7.8854365 9.7641300 10.6373203 7.4709736 12.9967644 9.1756478 10.8606629 10.1597025 10.0432451 9.8884495 10.3689536 7.9933364 NA 9.6703730 8.3784765 10.3004738 6.1305479 11.3165432 9.9283149 7.0092430 13.9242043 10.3289542 10.4501482 12.4740569 11.4141600 9.3930985 2.8201994 TCGA-EW-A3U0 61 0 NA 532 breast stage iiia t3 n1a m0 female 2011 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.121176e-06 1.040392e-06 10.174039 9.539576 11.600316 9.078675 8.729282 9.278575 8.157301 10.188589 10.541531 11.913171 10.982618 10.119572 -1.308287 11.725330 1.276675 10.372534 6.199529 8.784493 10.933421 8.670446 NA 8.234767 7.598626 10.646644 10.206449 9.224091 5.167470 12.059696 11.741243 3.779197 8.994374 7.328360 4.939664 6.663279 10.258265 10.027126 9.393042 9.890180 11.153982 10.331980 2.013677 10.426021 15.407724 7.950561 10.065144 11.132085 10.425598 4.335590 -1.308287 9.694550 10.517489 -1.308287 10.205956 6.752431 7.854127 6.392175 8.826162 12.081904 9.862912 11.970330 12.711673 6.473095 10.957643 10.443350 10.713756 10.734763 4.215298 11.606868 9.019288 1.276675 11.420506 8.906054 6.317664 5.967860 10.118000 10.057511 10.859153 8.981754 2.499093 5.562099 13.029287 12.306445 9.873509 10.435307 -0.0022168 0.3682100 -0.1682800 0.3629700 0.6898000 -0.3869400 0.2470000 0.9880400 1.8238000 -0.3829100 -0.3829100 0.5572600 0.3845200 0.0216030 1.1231000 0.0788710 0.0788710 0.2932600 -0.3847000 0.4940700 0.3898200 1.2603000 -0.0085766 0.0022021 0.7661900 -0.1750000 -0.1750000 -0.3747100 0.4151300 -0.3858200 -0.2797700 -0.1349700 -0.3883900 -0.4051700 -0.3807800 0.1128400 0.0095883 0.9880400 0.4415500 -0.2326400 -0.0135400 -0.3984200 -0.3973000 0.4444300 0.0045800 -0.1919900 -0.2309200 0.0216030 -0.2331100 -0.4084900 0.0788710 0.0469840 -0.3832500 0.0123760 -0.3847000 0.5088100 -0.3811200 0.0926050 -0.3847000 0.2103900 -0.0085766 0.0022021 0.3812200 -0.1887300 -0.1750000 -0.0310860 0.0070826 -0.3977500 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.000 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 0.000 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.000 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 0.000 10.4507912 13.5630630 3.1511607 11.0995341 7.1915814 12.7621917 7.0667748 3.0136588 9.3990944 11.1606138 7.4828983 9.4536853 5.0315849 10.1840892 9.0990029 2.1511769 10.6661499 9.1623941 9.5372254 9.0293571 8.8074551 7.1715151 11.4139024 3.8210162 9.5535976 10.6843196 3.5986272 NA 10.9649481 7.7443031 12.8277651 12.1113005 8.3676921 10.1127481 9.4042622 9.5015034 5.8210188 2.8616577 NA 4.5986272 9.1064206 9.7374950 7.7113263 9.1377848 6.7602981 7.6016282 10.5423128 5.9955162 10.1372675 6.1593406 11.8586829 4.8414801 4.9011903 9.0963765 5.8797793 8.6269001 9.9217557 10.0792141 10.9923738 1.0136409 12.9497859 0.6917128 10.4561922 -0.3082872 9.1179999 5.0136632 7.6889147 8.4094117 10.456802 7.515102 8.340991 11.725330 10.312413 10.572849 8.670446 12.694374 9.422078 10.852867 13.224943 13.052034 9.694550 7.565179 4.598627 8.315617 10.690326 10.945583 6.142946 8.704360 10.380423 8.335591 9.593869 9.375607 8.161377 10.982618 9.809378 2.013677 9.615805 10.014154 10.620624 10.990371 7.601628 8.543484 9.919351 9.233800 11.575188 9.393042 10.528180 10.617660 11.339419 11.349054 10.531333 7.993232 NA 9.892983 10.353958 10.205956 6.861660 11.041569 8.826162 7.476370 13.584752 9.732025 10.557082 12.908936 11.583519 9.312871 4.364159 TCGA-EW-A423 75 0 NA 309 breast stage iia t2 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 3 2 NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 6.589149e-07 9.0429819 9.0732244 10.5516553 5.9024185 9.3142325 8.3488206 10.4468525 9.4959433 10.1951197 12.7990340 11.1291221 9.8979531 1.3946239 13.3603634 2.7165520 8.8894799 7.3804663 8.1644620 9.4913394 12.9735865 1.3946239 14.0913201 4.1759876 10.7286293 10.5418291 3.4390247 -1.6051566 9.5356329 9.1939058 0.7165959 7.5893807 5.2401158 -1.6051566 3.3488273 8.8354934 9.2954909 9.2163981 10.6195303 9.9996407 10.7532754 3.0950636 11.8518768 14.0080971 8.1707773 11.4105619 9.9630554 10.4482107 4.6040773 8.4016514 7.6472893 10.7777885 NA 10.1071512 4.0670535 5.8208886 3.6040832 10.3833089 11.6945477 11.0038029 10.7941691 11.6915404 8.5507072 9.9410365 9.6455147 10.0443295 10.0102538 2.8540555 10.6348192 10.3998978 1.7165520 10.4847366 8.2084056 5.1228176 5.0670492 10.3995469 9.8652831 10.4929854 9.0776187 1.3946239 9.4985676 12.0869128 11.1367230 10.0483649 10.4124765 0.4008800 1.2795000 1.2516000 -0.4673100 -0.0243020 -0.0660340 0.3992200 0.4059800 0.3871100 0.0039163 0.0039163 0.0142780 0.2721600 0.2721600 0.4140600 3.6569000 -0.5266900 -0.0548750 -0.0641560 0.4411500 -0.5166500 -0.0323650 0.3222800 0.3222800 0.3222800 0.3655300 0.3655300 0.3655300 0.4369300 -0.4893600 0.4008800 -0.4564400 -0.4686900 -0.0460920 -0.0683110 0.3960600 0.3960600 0.4059800 0.3871100 0.4003800 0.3874400 0.3874400 0.0039163 -0.5078600 -0.5078600 -0.5078600 -0.4929100 0.2721600 0.2721600 0.4020400 -0.5116000 -0.5063300 -0.5063300 -0.0548750 -0.5001000 -0.0195030 0.3801700 -0.5097400 -0.5047700 -0.4945800 -0.5101500 0.3222800 -0.4972900 -0.5453600 0.3655300 0.3978900 0.4117200 -0.4866300 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.514 0.000 -0.058 -0.467 0.000 0.322 -0.497 -0.497 0.366 0.366 0.401 1.252 -0.144 0.227 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 0.000 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.514 0.000 -0.058 -0.467 0.000 0.322 -0.497 -0.497 0.366 0.366 0.401 1.252 -0.144 0.227 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 0.000 8.55575596 12.26363960 3.71655199 9.26575943 1.71655199 12.59835455 0.71659588 NA 9.41212861 7.45261602 -0.60537611 5.79550463 2.09508049 9.65671909 10.09289480 2.97958639 5.49265758 9.73447423 9.05818227 11.77562629 9.45132281 6.60407726 10.47577477 3.78694131 7.81879050 9.78586781 2.64256296 1.56457328 11.24089810 2.97958639 12.59605897 12.26093720 7.40024844 10.06084816 8.68809571 10.44617299 3.64255140 2.39462389 0.71659588 3.94921741 9.98333881 10.64788074 11.04320648 2.64256296 9.91065412 9.08199997 9.95256654 5.09506361 9.51874560 NA 11.45599539 -0.02034045 4.41699508 10.32879788 7.01638266 1.71655199 9.01484399 7.38046626 7.06704923 1.85407546 14.12930736 0.39462389 10.59061147 -1.60515664 6.32536123 6.68924464 8.07234380 9.15034642 14.411896 6.337138 8.564549 13.360363 10.479765 11.080468 12.973586 11.798169 8.214133 9.249493 12.342170 8.230675 7.647289 9.365449 3.439025 7.510968 11.479765 10.4853982 6.4169917 9.0950639 8.4820871 8.4390184 10.0852638 8.2954912 5.6234426 11.1291221 6.6377986 0.3946239 7.6330286 8.0237255 8.1857873 10.0289815 6.8984502 10.3404338 8.6150024 4.2019788 12.1078474 9.2163981 10.1092990 10.6225409 10.8809564 9.5011871 10.4478713 6.3134871 -1.6051566 9.9041320 3.6040832 10.1071512 3.3015145 10.8791954 10.3833089 7.1019830 14.3717248 9.8668072 9.7411380 11.7192267 10.9540013 9.3697557 NA TCGA-EW-A424 51 0 NA 715 breast stage iiia t3 n1 mx female 2012 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 2 2 NA NA 1 4 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4740606 8.7802399 10.7146455 7.5092263 9.1989371 8.7409734 9.4952630 9.7011609 10.8886126 11.4091946 11.4396740 10.1958008 4.0243019 12.7633907 3.1067671 9.7880708 7.2707429 8.3880535 9.5035306 12.7309196 1.9368546 14.0186033 4.8910400 10.3335077 10.6430504 3.1067671 -0.6481456 8.8685645 7.8832610 0.3518544 9.0941891 7.0523192 NA 4.6917296 9.2237850 9.5619422 9.7083318 11.4071622 9.5398503 10.3550462 7.3546946 11.6806949 14.4094485 6.4993389 10.3742476 10.7135494 10.5104894 5.7865075 6.2826177 7.5392317 10.9773603 -0.6481456 10.3345169 4.4604018 4.3518827 3.9665874 9.6972851 12.0664473 11.0141031 11.4041081 12.4129133 9.2640205 10.8542143 10.6539475 10.9529541 9.9975381 3.5613384 11.4738988 11.8664705 -1.6479195 10.3652024 8.5454051 4.8279359 2.7442042 11.3291597 10.0536194 10.4821285 8.8265996 3.4393439 9.3111573 12.7504899 13.4236773 9.9236323 9.5003563 0.00416320 0.64276000 0.64854000 0.00903120 -0.00585810 -0.01614600 0.00875280 0.02834100 -0.02342900 -0.63972000 -0.63972000 0.00694350 0.02946600 0.02946600 0.03256300 0.03256300 0.03256300 0.00651450 0.00651450 0.01335300 -0.64311000 0.06422500 0.06392600 0.06392600 0.06392600 0.09304000 0.08488100 0.08488100 0.07486700 -0.59789000 0.00416320 0.00000000 -0.00585810 0.07887100 -0.02315500 -0.00329230 -0.00329230 0.02398700 -0.02342900 -0.67426000 -0.00025623 0.05708300 -0.65454000 -0.11228000 -0.10145000 -0.10145000 -0.10145000 0.02946600 0.04840400 0.05580000 0.03256300 -0.65334000 -0.63708000 0.00651450 0.01152800 0.06895200 -0.01432300 -0.64311000 -0.62713000 -0.61959000 0.06392600 0.06392600 0.06393900 0.09304000 0.08488100 0.07599100 0.00499690 0.12904000 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 0.000 8.7686773 13.0753274 7.4630150 10.1997201 2.8178483 11.1509589 1.1592417 -0.0631077 9.1430426 9.3391438 1.5218046 7.1448326 4.2345243 10.2785463 9.8808222 3.3060726 8.4734131 9.0626862 9.4446368 10.6485092 9.2852975 6.9555058 10.4538554 1.6738278 10.3490593 9.9688879 5.3853033 NA 10.9566646 4.5807003 12.8603554 11.7904117 7.5317885 10.3017064 8.0065157 9.5998072 4.1592336 -1.6479195 -1.6479195 3.9368452 9.5230565 10.5530847 9.6210064 5.5417038 9.2382774 8.4326972 10.8786235 5.6556609 9.6268403 NA 11.1422282 3.7094340 4.7094340 9.8518152 7.3820230 4.9957378 9.2044093 7.4152745 9.5317889 -0.6481456 14.3338260 -0.6481456 10.3794402 -0.0631077 8.6476487 5.2098588 7.7633910 9.0357517 12.237751 6.100074 8.637282 12.763391 10.324142 10.899497 12.730920 11.197958 9.367100 10.181603 12.545636 11.482450 7.539232 8.924580 3.052312 7.501627 10.596244 10.833427 6.910301 8.441992 9.307530 7.964748 9.995718 6.146295 5.769732 11.439674 8.947137 4.052320 8.444637 6.332248 11.018769 9.822030 7.020764 9.966590 9.345526 5.521805 13.134366 9.708332 10.192658 10.372165 9.814893 9.789112 10.328086 7.156011 NA 8.715292 6.172059 10.334517 5.803090 10.966360 9.697285 6.418291 14.583626 9.588492 9.927892 12.239291 11.661356 9.844734 -1.647919 TCGA-EW-A6S9 34 0 NA 463 breast stage iia t1c n1 m0 female 2013 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 1 NA NA 1 2 3 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9745845 9.1763854 12.2214439 9.5746387 9.1571875 9.2687198 10.3709957 9.8323576 9.9135415 13.6099715 11.4914316 10.6086029 2.0726203 17.0502299 2.6131780 10.1567043 7.1130347 8.3325777 7.3308658 12.9689531 -1.3868456 13.3235112 4.6575828 9.3086958 10.7536993 8.1504074 3.1981484 8.4429120 10.1615294 2.3136232 8.9860542 6.9123972 -0.3868456 5.0225809 10.2379845 10.4916232 9.3214109 9.8335674 9.7262800 11.5300016 0.1981169 9.2642408 15.1168285 8.4351860 10.0156682 10.6640580 10.6916735 4.3945484 4.1677754 9.0268169 10.3058046 -1.3868456 11.0278743 5.0726203 4.9530370 5.2570446 9.5782517 11.6620165 10.4578949 12.6290396 12.5115070 6.9925679 11.0797754 10.5821617 11.1482214 11.0959970 5.0889218 11.7994581 13.5614650 -1.3868456 10.7689560 8.8492033 3.3707502 5.3546567 9.8962775 9.4664987 10.7145082 9.5883206 2.0726203 7.2642408 13.5024553 11.6216177 9.9480210 9.9630232 0.0534740 0.0534740 0.1475600 -0.1627400 -0.0914200 0.0189430 0.0532370 0.1027800 3.6569000 0.0944910 0.0944910 0.0944910 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0062286 -0.0540160 -0.0540160 -0.5312400 0.0754150 0.0000000 -0.6313100 3.6569000 0.1616000 -0.5036000 0.6335300 -0.0047079 0.0738740 0.0534740 0.0534740 -0.1707200 -0.1627400 0.0189430 0.0214630 -0.6095000 -0.6519300 0.1027800 -0.6051600 0.0346770 0.0711040 0.0583670 0.0944910 -0.0790770 -0.7366100 -0.0530710 -0.0530710 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0062286 -0.0062286 -0.0540160 -0.0540160 -0.0540160 -0.5312400 0.0623000 0.0000000 -0.4552200 -0.6313100 -0.2900000 0.0535210 -0.5036000 -0.5878400 0.0891270 -0.0682610 -0.5690200 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 0.000 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 0.000 8.4602466 14.2965127 9.5431871 9.8250774 2.0027385 11.6034703 0.1981169 -1.3868456 8.9396186 9.1858893 0.1981169 8.2639715 -0.3868456 10.7052855 8.9146853 3.4711745 6.2926695 9.6424763 11.0386672 11.4736941 10.0434535 8.0623376 11.1256826 2.6131780 8.8705768 9.9541518 2.3136232 NA 12.4001733 2.3136232 12.2542247 12.2458435 8.0097939 8.9158280 9.6445456 8.9652325 5.2570446 1.4205632 NA 4.6792774 7.9032076 9.6745602 10.3584432 1.1981798 8.1104421 8.1130347 9.7930982 6.0225809 10.0828308 NA 9.7768388 4.7424698 3.8985953 9.3572577 6.6975723 6.5789734 8.8776317 7.2498141 8.1406662 0.1981169 13.2056461 0.1981169 10.4325699 NA 8.6479879 4.4711679 8.3529695 7.9729384 14.206034 6.526078 9.024700 17.050230 9.444496 10.669488 12.968953 11.563927 9.267977 10.674898 13.210951 10.088922 9.026817 9.357182 1.198180 7.549827 11.409837 11.5193280 5.7321308 8.9373697 8.9089579 8.4658435 11.0867122 7.1170145 6.9169698 11.4914316 7.5673857 4.6575828 7.5260782 7.4779946 12.5248619 10.2237526 7.2820737 9.5557036 10.4460791 6.4773746 11.5080485 9.3214109 10.1687368 10.2583971 10.5750005 9.7099042 10.5219569 9.8097911 -0.3868456 10.2880654 7.1445706 11.0278743 7.7295331 10.7282327 9.5782517 7.3879759 13.8491285 10.1811452 10.2718469 12.5779811 10.6414404 9.3780607 1.4205632 TCGA-EW-A6SA 59 0 NA 510 breast stage ii t2 n0 (i+) mx male 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2601575 9.3065088 11.4894193 8.4075525 9.0918749 8.8347371 10.8189589 9.9564624 8.0108604 13.9927622 11.9217959 10.7713309 -0.1028370 12.5939406 3.1701334 7.5952441 5.6067768 8.3929729 10.9779355 13.6435973 0.3122005 15.1246712 NA 9.6887421 11.8101320 5.9703659 0.3122005 6.1195097 10.6433523 -1.6877995 7.0502481 6.7467830 NA 4.1947962 9.2908660 9.4388598 10.0815801 9.3996182 10.3372950 10.7257834 1.3121424 11.8393881 14.1938430 8.7074647 9.6614366 10.6969392 10.1732424 4.2190446 0.3122005 8.3442014 9.8522836 -1.6877995 10.2919379 2.8357220 2.1195222 1.4820738 10.0607677 12.5030604 10.4561764 12.4787893 13.6792289 7.9774912 11.1751802 11.0977408 10.5200849 10.9618607 3.6697071 11.7137017 12.6735510 -1.6877995 10.1489948 9.6947794 2.8413492 1.4820738 11.2608877 10.9938331 11.1951805 10.3735266 1.6340821 6.0195151 10.7723553 9.3275706 10.2008987 9.8801115 -0.224500 -0.328870 0.319360 0.056979 0.039865 0.096710 0.057978 0.038810 0.000000 3.317100 1.250900 1.215900 0.115690 0.074277 -0.197650 1.357100 -0.720100 -0.389030 3.656900 0.323870 0.222400 -0.649370 -0.652090 -0.644690 1.314600 -0.630330 -0.630330 0.402820 0.342950 -0.128720 -0.195090 0.538940 0.056979 0.520180 -0.184550 0.057978 -0.164300 0.038810 0.000000 0.016044 -0.401820 -0.412220 -0.689900 0.280640 0.280640 -0.640730 -0.582420 0.074277 0.084393 -0.201960 -0.082366 -0.720100 -0.731890 -0.414070 -0.412970 -0.412970 0.243310 -0.753720 -0.399050 -0.698720 -0.652090 -0.644690 0.291080 0.467120 -0.612270 0.170500 -1.257700 -0.660840 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 0.580 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.170 0.170 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 0.000 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 0.580 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.170 0.170 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 0.000 6.3836179 12.5588960 4.8357169 8.4128179 2.9560195 11.0078188 -0.6877995 NA 8.5742503 6.2369671 NA 5.9191899 1.1194890 10.7856075 9.4883286 4.8667448 4.1195139 9.7944592 8.2265408 11.5774775 10.3636873 7.4593603 11.0485574 -0.1028370 10.4973406 9.6004448 4.5409758 0.6341286 10.2295275 3.6340821 12.0131369 12.2271945 6.8551874 10.4440124 6.2721576 9.6368986 2.4820738 5.6250396 0.6341286 7.2808218 9.3558664 10.2469521 9.8585676 1.8971242 9.7589389 7.5142793 10.2940794 5.3674375 10.8793985 NA 9.7695364 0.3122005 4.5216099 10.1125984 6.1835679 -1.6877995 8.3149706 7.0902321 3.7384220 NA 13.7507849 0.6341286 10.3805979 NA 6.2369671 5.0935137 8.9433324 8.7108991 15.4884235 6.0670428 9.3022594 12.5939406 10.1191078 9.4082117 13.6435973 12.9051964 7.9176352 10.0246825 12.1849265 10.1986141 8.3442014 8.1418783 0.8970855 8.0160589 13.1168915 10.550560 6.106572 8.906480 9.781288 8.681393 10.259263 3.399622 4.145042 11.921796 7.002153 NA 7.906480 7.930853 8.845485 8.494550 7.952401 9.520999 8.772611 2.219060 13.574746 10.081580 9.402930 9.666405 14.559378 8.452985 9.743653 8.090233 NA 8.602105 2.399609 10.291938 4.615934 10.571016 10.060768 6.930541 13.704305 10.641391 9.574250 10.619641 11.888404 9.613080 -0.102837 TCGA-EW-A6SB 62 0 NA 760 breast stage ii t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2739065 7.4803572 10.5519515 6.9328702 8.6429521 8.6896741 8.7497055 10.5693084 12.4838335 12.8765266 11.4106798 10.3444350 -0.6743833 11.5660326 2.4954649 9.5923258 6.4340644 8.7890638 9.6144054 6.5734669 NA 9.6687251 6.9908755 9.8859486 10.3360674 6.8253850 1.3255591 11.7697778 10.9873175 0.3255015 9.0207678 5.6293187 NA 8.8953950 8.2081822 10.6063101 8.9890976 8.9067400 8.9711978 10.1694604 1.6474527 8.1101742 13.8147601 6.1416269 10.0120399 9.6463398 8.2294211 2.4954649 -0.6743833 7.1959037 8.7306807 NA 10.9662362 3.7178573 7.5639444 5.3699340 9.8510602 11.8325906 11.1772884 11.2032069 12.1933972 5.2797350 11.0036993 10.7210735 10.7788100 10.1663173 3.0259855 11.6429520 7.4548224 0.9105024 9.4509528 9.6236019 2.3255303 4.7178573 11.8571645 10.0728932 9.8868274 10.0644760 1.6474527 6.4235714 11.6756498 11.4163134 9.5227561 10.3304620 0.36100000 0.36100000 0.55054000 -0.02325000 -0.01078400 -0.18244000 0.00930980 0.00083195 0.01000600 -0.39753000 0.16010000 0.78331000 0.39147000 0.02468900 0.18450000 0.18450000 0.18450000 1.11300000 -0.00373950 0.01000600 -0.17537000 -0.19625000 -0.20535000 -0.20448000 -0.20448000 0.14831000 0.14831000 0.18935000 -0.00332430 -0.20958000 0.36100000 -0.02315500 -0.02325000 -0.42766000 -0.21595000 -0.35442000 -0.35442000 0.00083195 0.01000600 0.00261960 -0.17221000 0.21613000 -0.40533000 -0.22613000 -0.22613000 -0.22613000 -0.22613000 0.02468900 0.02468900 0.18510000 0.18450000 0.18450000 0.18450000 0.95620000 -0.00373950 -0.00373950 0.01000600 -0.17537000 -0.19625000 0.09638000 -0.20535000 -0.20448000 0.18268000 -0.14530000 0.18935000 -0.00332430 0.41647000 -0.20486000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.284 0.284 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 -0.184 0.000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.284 0.284 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 -0.184 0.000 10.0285777 11.8834816 4.2324305 8.4235714 3.7849750 12.4352068 1.6474527 5.3916268 9.8944455 7.1328945 5.2081817 7.4235714 3.4129983 10.6581354 9.7038342 0.9105024 4.6830901 10.1655304 6.9693957 9.7580813 8.1917363 6.1710286 10.1150731 2.9105024 9.3056790 9.8372921 1.9105024 NA 10.3492937 4.9105024 14.3527542 12.7138258 6.6384229 10.0242440 9.6338784 10.4438315 0.9105024 4.3255375 0.3255015 NA 10.1678896 11.6036984 7.0870905 2.7849646 8.4809396 7.7476042 9.9684936 4.9105024 8.9235919 -0.6743833 12.0209851 2.4954649 2.3255303 10.7602510 8.1409545 10.4942115 9.2081824 8.8801281 13.9787203 4.4954649 14.4767145 1.3255591 11.3301110 NA 9.3808219 1.6474527 8.4288270 8.2651185 11.905680 8.610941 8.358962 11.566033 10.117516 11.650282 6.573467 8.399681 9.536211 11.600209 13.293396 11.768224 7.195904 8.265119 3.495465 6.825385 9.691862 9.9521610 9.0854276 8.8510600 8.9179965 7.9693957 9.5500114 8.0904110 7.0190258 11.4106798 5.3479066 0.3255015 10.2294213 9.2671739 11.5621515 10.9882077 8.2354322 10.0837625 4.6830901 10.9806228 9.7800238 8.9890976 10.3071066 10.4353700 10.7829203 10.1449201 10.0285777 7.5543578 NA 10.4546163 11.7818938 10.9662362 3.9105024 11.0406434 9.8510602 7.5054488 15.3898190 10.9015512 10.9485063 12.2523913 11.8953950 8.3862354 6.2081817 TCGA-EW-A6SC 60 0 NA 952 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 2 1 NA NA 1 4 2 2 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3091146 10.0274372 11.6989291 8.9898097 8.1444314 9.3505255 10.4189253 9.9413520 9.8085225 10.0736941 11.6852004 10.4926604 -0.2522259 12.5340962 3.4482667 9.8969386 6.7922203 8.2753037 7.9177516 12.2629104 1.9177373 13.7911103 4.6785621 9.2363094 10.4960195 7.0424474 -0.2522259 11.5102086 9.4352023 NA 8.6815171 7.1444309 NA 4.1053764 9.9271136 11.5834823 9.7908538 11.0265664 9.9975326 11.2811563 8.5027141 12.0140275 14.5736549 8.7176593 10.8135759 11.1374579 11.0590073 5.3176839 3.8352875 9.0798631 11.3746764 NA 10.9654814 6.5291869 6.0424474 5.1907689 10.5336877 12.0421601 10.4508649 11.8412442 12.9769458 8.9621458 10.8085225 10.5790388 11.2952032 11.1225944 5.0146142 11.3882975 11.8800050 -0.2522259 10.5442719 8.8937587 4.0335992 5.8667671 10.0116826 10.1535000 10.1808904 9.0584393 2.0697709 8.1593375 13.4187041 11.6403694 9.9239998 9.8758209 0.0158660 0.0158660 0.6137100 -0.0026322 -0.0026322 -0.0076101 -0.0030475 0.0011093 0.0011093 0.0024969 0.0024969 0.0024969 0.0109660 0.0134920 0.0066653 2.7142000 -0.6316900 -0.6271300 0.0000000 0.0019418 0.0408920 0.0195030 0.0370760 0.0387710 0.0321400 0.0296060 0.0296060 0.0296060 0.0274970 0.0158660 0.0158660 0.0144700 -0.0026322 -0.0076101 -0.0215110 -0.0030475 -0.0030475 0.0011093 0.0011093 -0.0112040 -0.0060745 0.0019418 0.0024969 0.0114000 0.0114000 0.0114000 0.0114000 0.0134920 0.0821880 0.7128300 -0.6261700 -0.6424600 -0.6424600 -0.6371800 0.0000000 0.0000000 -0.0036011 -0.5922400 0.0195030 -0.6738900 -0.6276000 -0.6217900 0.0105640 0.0296060 0.0296060 0.0274970 0.0136320 -0.6334400 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0134416 14.7845368 9.2316424 10.7587043 3.0697537 10.9051735 2.7478170 0.7478600 8.4096048 8.7674174 -1.2522259 7.9465174 4.1401406 10.4051451 9.6689236 2.7478170 9.5901770 9.3384137 10.3780937 10.1714678 9.4463836 7.3100692 10.9880216 2.3327938 8.9462718 9.7492347 5.3625365 3.9572832 11.3999994 4.6058084 12.0500371 11.9264914 8.1845382 10.3143563 9.1020760 9.3072038 3.9957558 2.3327938 -0.2522259 8.0004919 8.8085225 9.4757470 9.3374776 4.8975744 6.9655419 6.8873778 9.8912099 5.6304695 9.6888741 -0.2522259 10.8279779 4.4482667 2.9177563 9.7455565 7.0167660 5.2396806 10.1814121 7.6874058 7.9981250 -0.2522259 13.4374970 0.3327366 10.2103288 NA 8.1529682 5.2713883 8.0447427 8.8835359 15.041193 5.937650 8.144431 12.534096 10.011096 10.506466 12.262910 11.961994 8.344016 10.148172 14.215209 10.988320 9.079863 8.905174 2.835298 7.672639 11.282373 11.265004 8.096555 9.857004 9.308159 7.722241 11.004472 7.317682 6.489294 11.685200 7.290858 2.654710 6.215432 7.689930 10.955146 10.401120 8.933941 9.786060 12.204823 6.455186 12.566038 9.790854 10.179846 9.327143 11.325963 10.532870 10.300496 8.525904 NA 9.076232 6.255622 10.965481 7.427307 10.748179 10.533688 7.792658 13.633475 10.589391 9.702023 11.869522 11.019290 9.429065 1.069771 TCGA-EW-A6SD 32 0 NA 1010 breast stage iib t2 n1a m0 female 2012 NA yes infiltrating ductal carcinoma 2 black or african american hispanic or latino NA NA 4 5 NA NA 2 6 1 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5213855 9.4914669 11.2760903 9.2166278 9.1404868 9.9366287 9.6830618 9.9329231 11.3383437 14.0669159 9.7336372 11.0052840 3.6518439 16.8935235 4.4173800 10.3960042 7.5904426 9.1057996 6.6991490 12.9339277 NA 11.8582064 6.5523079 9.0644892 11.0052840 9.4358236 5.1372699 9.8915213 11.0277514 -0.2549779 9.1680683 7.3110062 NA 6.4931461 10.6029336 9.7913944 9.7250922 11.2275084 9.7610643 11.2828989 8.2002797 9.2176434 14.6276433 7.6843847 8.7179324 11.0361233 12.5730890 4.2685167 0.3298699 8.9248615 11.1049765 -1.2549779 10.5683197 4.5778397 7.1878964 5.3888095 10.5841563 11.7065831 9.5304050 11.9352402 12.7431022 6.4173783 10.4257515 9.7170994 11.7175734 10.9887216 4.9148754 11.6467622 9.4049485 -1.2549779 10.6378747 9.2714518 2.8332544 5.4864183 11.4732982 10.1107282 10.9041932 9.9653309 1.3299273 7.7393060 12.7883217 13.1088819 10.1910019 9.4566195 -0.611970 0.088321 0.106130 0.088756 0.038833 0.178360 0.191540 2.518200 3.656900 -0.264270 0.316060 0.496220 0.115130 -0.282510 0.117030 0.117030 0.117030 -0.608210 -0.614940 0.086730 0.104010 -0.276860 -0.613600 3.656900 2.885300 -0.171010 0.105030 0.105030 0.112780 -0.616960 0.211990 0.000000 0.067475 -1.003500 0.757280 -0.626300 -0.624510 -0.177850 -0.627880 -0.633730 0.101240 -0.260050 -0.632460 -0.612450 -0.612450 0.032906 0.032906 -0.282510 -0.280430 -0.613410 0.117030 -0.612540 -0.621950 -0.608210 -0.612160 -0.612160 0.086730 -0.557030 -0.323510 -0.218930 -0.613600 -0.590150 -0.564810 -0.171010 0.105030 0.112780 -0.327920 -0.621270 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.223 -0.223 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 -0.132 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.223 -0.223 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 -0.132 8.7064021 13.4729793 3.3299129 9.2186584 5.5131370 12.0071942 2.9148706 5.7783768 8.6712484 8.3541312 NA 7.8029441 6.3223807 11.0323763 9.5982621 2.8324242 8.0510142 9.4973331 9.3915113 12.0016035 8.0185852 7.9198781 10.6268312 2.7449576 7.7421322 10.0942338 2.6518439 NA 13.9698963 1.3299273 12.0159778 12.3316751 7.6367363 9.5106530 8.2782822 9.5098241 4.8324141 1.3299273 0.3298699 7.7589727 9.3770389 9.7673204 9.8864210 2.0668814 10.3530918 8.8664861 9.5683198 7.0023402 10.0146637 -0.2549779 11.1431618 4.2043833 3.5523033 9.1100719 6.8025112 8.4419200 8.7035053 8.3033734 10.4817772 2.6518439 12.8772113 0.3298699 10.8809824 NA 11.2010502 3.7449576 8.1858220 8.3374096 12.042403 7.756180 9.352283 16.893523 10.207455 10.654471 12.933928 10.620702 9.021077 10.469381 13.386440 9.645819 8.924861 9.119992 2.066881 9.896603 12.642325 11.793610 5.842984 8.429701 9.380671 7.934777 11.175416 7.523029 8.875523 9.733637 9.344865 NA 8.137270 7.647177 13.674951 11.649587 7.565132 9.569116 9.920502 8.840350 11.044756 9.725092 9.781813 10.371118 10.776998 10.623770 10.818090 9.191002 3.699152 9.333377 8.943397 10.568320 6.291847 11.036549 10.584156 8.030771 14.306508 9.837049 9.804297 12.485577 11.717753 9.215611 3.914880 TCGA-GI-A2C8 63 0 NA 225 breast stage iiib t4b n0 mx female 2004 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 1 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 6.935946e-07 10.770101074 10.196430124 11.598083634 9.572470590 7.916674882 9.061968400 9.905139213 10.029536674 10.101179409 12.381636334 11.645273798 10.550746785 1.228172218 9.227369497 3.630277319 11.230788908 5.476102973 8.559091774 10.505296100 12.516134454 0.742782340 13.695853092 5.398100641 9.506511300 11.373561107 8.046528712 -0.579275081 12.406395004 7.247368361 3.668743189 8.220101613 7.625391050 0.005759269 5.733704125 9.880763724 10.669933304 8.000135810 11.637717238 9.563565052 11.775069230 1.005759269 10.350817884 14.626632186 7.832415365 9.267877283 9.626613075 10.935040743 4.959978756 6.994466585 9.706799893 10.820097809 NA 10.708532225 5.363335807 7.093245355 5.079032437 10.681445400 11.612341808 10.479149907 11.797623553 12.833125066 8.141919112 10.684382466 9.855880563 11.235802796 11.281906735 4.550100313 12.626994802 13.145706699 -0.579275081 10.575954316 8.360398956 2.769200471 6.800198437 8.959978756 9.841832735 10.074112823 11.775207002 7.172363499 7.152138791 12.985148007 12.248857135 10.158912080 9.699850035 0.2535500 0.4708400 0.4708400 -0.3469800 0.3119300 0.6573700 -0.0158790 -0.3632900 -0.0193140 0.4046100 0.4046100 0.0047183 0.0669450 -0.2610700 3.6569000 0.7318900 -0.0117490 0.0726840 -0.3544200 -0.0186280 0.0310140 -0.7066600 -0.3495000 -0.3366400 3.6569000 0.0095883 0.0095883 0.0095883 0.3889900 -0.3409000 -0.3225100 0.0065262 -0.3469800 -0.3520200 -0.3535000 0.0131480 -0.0048461 -0.3824600 -0.0193140 0.0000000 0.5385400 0.3539800 0.0230050 0.1990800 0.0674940 0.0674940 0.3252700 -0.2610700 0.2835800 -0.3572600 0.0248290 -0.0117490 0.0088031 0.0726840 -0.3544200 -0.3544200 -0.0186280 0.0310140 -0.0074720 -0.3317900 -1.0525000 -0.3366400 -0.3531100 0.0095883 0.0095883 -0.0041546 -0.3611300 -0.3384800 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 0.000 9.230588032 12.698470492 7.124723085 11.140208665 3.327716103 9.441799873 -1.579059544 NA 8.409504650 8.535863612 NA 7.980330972 1.005759269 10.306134962 9.280354602 0.005759269 9.452865552 9.399530227 13.322770909 9.256870313 9.062772296 7.492281834 11.469647260 4.959978756 9.505628179 9.881275815 2.813134719 0.005759269 10.411632902 1.880254513 12.307278550 12.207191595 9.647833982 10.378647411 9.114306894 9.052906270 6.247367411 2.420832692 0.420832692 2.742739233 8.899589548 9.543647832 10.311464175 3.375011620 9.241006886 6.644821030 10.019337609 7.984969227 9.104691785 NA 10.591683811 3.944380591 5.375015097 9.654055970 5.774671112 2.668754533 10.147463798 8.710838799 5.659225298 NA 12.838079040 1.420832692 10.628139288 NA 6.605695814 7.443188070 8.671118192 9.221719785 12.540698 3.847085 9.444574 9.227369 10.105130 10.675848 12.516134 10.560371 8.979241 10.595434 12.869969 9.573105 9.706800 7.064676 NA 9.451487 12.220405 11.3838965 8.6192648 8.9206658 8.4652142 6.3633341 10.7412961 7.6278344 5.9677150 11.6452738 7.5397606 1.0057593 6.9677139 5.6773588 10.9539062 10.4497619 8.1988968 8.2678770 10.9849694 5.0932432 13.1950978 8.0001358 10.3973839 9.6192650 11.6703778 10.0048428 10.7131415 9.7314326 0.4208327 9.2912925 5.0057817 10.7085322 8.8637635 11.4068396 10.6814454 7.4895983 13.1294188 10.0433293 10.8494418 12.5652391 9.2795779 10.5571702 3.2281722 TCGA-GI-A2C9 58 0 NA 3342 breast stage iib t3 n0 mx female 2003 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.190535e-06 1.005712e-06 10.752516797 9.385631637 10.847353139 9.481079923 9.052496050 8.927459764 8.536626056 10.719181044 11.826279983 13.223076080 11.508293552 10.364591144 -1.582512001 11.754191409 3.843953704 10.149852270 7.607509345 8.277219507 11.586356995 5.032396230 -1.582512001 9.428912228 9.114652287 9.503867468 10.638063155 5.515715605 -1.582512001 10.457632046 9.989911450 1.587605020 9.075896254 8.840800893 0.002594517 2.877116001 9.345462909 11.065143323 8.961683227 9.338037704 10.163359221 10.786736835 1.877116001 6.689148173 15.446605335 8.621681212 9.685056760 10.870440860 10.701352038 4.843948680 2.877116001 9.880698227 10.723461632 NA 10.483774067 7.660858755 6.602560805 6.225039655 10.701641319 11.574873903 10.449730559 11.823889883 13.029516573 9.036987887 10.230263307 9.773355347 11.611672158 11.063118111 4.348423651 12.734178545 8.793810392 4.956841927 10.538570754 9.038821069 3.584000383 6.032394026 11.143051139 10.453171330 10.764198591 10.334683909 2.118127122 6.536626444 12.791297728 11.648455871 9.314774005 9.236267060 0.1523400 0.6008900 0.7507100 -0.2004900 0.8532500 1.0879000 0.3885000 -0.8272400 0.2819400 -0.4298500 0.2700200 1.2490000 1.6803000 -0.3986300 0.5829200 0.0178300 0.0178300 1.5330000 0.4999600 0.4100100 -0.0826620 0.0063940 -0.1563000 -0.3142300 0.1175400 0.2191700 0.0227320 -0.0165950 0.0881200 -0.0756050 0.1523400 -0.1620400 -0.3689500 -0.3715400 -0.3160700 -0.5297100 -0.5774800 -0.8272400 -0.2646800 0.1362900 -0.3516700 -0.2337300 -0.0026254 0.5433100 -0.3749300 -0.3749300 -0.3794300 -0.3986300 -0.8663300 -0.3523600 0.0178300 0.1611600 0.5448900 1.5330000 -0.5081700 -0.4880600 0.0000000 -0.3519000 -0.9376200 0.5897400 -0.2528400 -0.3142300 -0.4857500 -0.0198570 -0.0165950 -0.8111200 -0.3056300 0.6005300 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 0.000 0.320 0.320 -0.253 -0.253 0.543 -0.283 0.196 0.000 0.161 0.161 0.000 0.000 -0.306 0.601 0.267 0.267 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 0.245 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 0.000 0.320 0.320 -0.253 -0.253 0.543 -0.283 0.196 0.000 0.161 0.161 0.000 0.000 -0.306 0.601 0.267 0.267 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 0.245 7.9234963 13.5544758 5.0175968 9.5610681 3.4620785 11.3574477 0.7395889 5.3125018 8.2218157 9.8233582 6.2942017 9.6013203 6.4511072 11.2037502 9.5514693 3.5051414 5.6271370 11.0035863 6.9215101 8.8408009 9.3447739 7.3395258 11.9300550 2.0026305 9.5982157 10.2485961 2.1181271 NA 9.9908586 5.6560902 13.7937424 12.4114194 6.6416862 11.0113094 10.5239206 9.2779959 1.5876050 1.2250281 -1.5825120 2.6656202 8.7497213 10.1033097 6.9215101 4.6844709 9.3230343 6.6844709 10.4187412 6.8688954 11.0927598 3.8439537 12.5485771 3.0026485 6.1658778 10.2887661 6.7071037 1.5876050 9.1379292 8.0597365 2.4176770 7.6222561 14.0048764 -0.5822960 11.2426436 -0.5822960 9.3528499 3.5469685 8.5104422 8.4648087 13.513992 7.043394 8.912541 11.754191 10.080642 10.832898 5.032396 11.068961 8.963615 12.100789 12.673820 11.243439 9.880698 8.304906 3.172568 8.187523 10.519332 10.072320886 5.909537915 8.539218534 8.083020783 4.462078502 9.454401091 6.848137162 4.909537915 11.508293552 8.468893619 2.739610514 8.967469522 8.252503652 13.429305245 10.700483761 7.697713363 8.462078911 10.177989028 4.118127122 10.770542163 8.961683227 9.950527757 9.666798303 12.562422774 10.157465429 10.260820764 9.551469298 -1.582512001 9.715300532 5.775237584 10.483774067 9.549541921 10.044306544 10.701641319 7.903836064 14.288458947 10.858813492 10.972513526 12.337758528 10.897212512 8.904519924 0.002594517 TCGA-GM-A2D9 69 1 1812 NA breast stage i t1c n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 2 3 3 5 2 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 9.432887e-06 3.398614e-06 10.1505843 9.3135585 10.9056078 7.6196617 7.7513673 9.5109093 10.5087630 9.5094787 10.2412826 12.7044701 11.1237212 10.0655286 2.1171631 12.8250956 3.4390912 10.0645547 4.5765947 8.6614817 9.6170073 13.0456797 2.6297996 13.7253391 7.1688235 10.6541921 10.3499820 7.5490068 -0.4677329 10.0934868 10.5051787 3.2326454 7.2937503 6.5094789 NA 3.2326454 9.0059046 9.9626514 10.0220468 10.5272593 9.8001559 9.6170073 2.8541353 10.7819049 14.6728289 8.2830064 10.6608376 10.8433795 10.5051787 4.7021256 5.2046259 7.8809273 10.8501767 1.1171631 11.4372097 5.0240537 5.1171631 4.8541253 10.2107989 12.0817429 10.8569420 11.6540561 12.6024875 8.3491826 10.5895137 10.1524187 10.6889140 10.5881591 3.6196595 11.3874567 9.2987277 NA 9.9761784 8.4239827 4.1177615 4.9584622 10.9341450 9.8036618 9.0079321 9.2770328 2.1171631 9.4893009 12.4551548 11.3407609 9.7257243 9.7207877 -0.01230000 1.09710000 1.12030000 0.00277450 -0.00492270 0.00305220 0.00346870 -0.00138580 -0.00296070 0.69167000 0.65903000 0.00097064 0.00291330 0.00291330 0.00986690 0.73000000 0.66586000 0.00124810 1.88630000 0.00124810 0.00393820 0.00652620 -0.00857660 -0.00857660 -0.00857660 -0.01780300 -0.01780300 0.43682000 0.00277450 -0.01230000 -0.01230000 -0.00180140 0.00277450 0.00305220 -0.00609040 0.00346870 0.00346870 -0.00138580 -0.00296070 -0.00296070 -0.00216660 -0.71167000 -0.71194000 0.00000000 0.00000000 0.00000000 0.00000000 0.00291330 0.01149900 0.00986690 -0.02835500 -0.70612000 -0.70612000 0.00124810 -0.70406000 0.01167900 0.00124810 0.00084143 0.01768400 -0.74025000 -0.00857660 -0.00857660 0.00819590 -0.01780300 0.43682000 0.00277450 -0.00471550 0.00221930 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 0.000 8.4056431 13.1617831 6.7021242 10.1311819 -1.2789336 11.0205411 2.1171631 NA 7.9028864 6.8720493 NA 7.4148417 2.9916261 10.5752261 9.5587222 2.1171631 8.3427703 9.3507810 10.0877466 10.4156058 9.3271832 8.1209133 11.1124574 2.3062039 7.8764948 9.9926547 2.8541353 NA 10.5116240 2.9916261 12.5208835 12.4144598 7.9875261 9.8742735 9.3979321 9.7989854 8.5765928 1.8541154 1.5322172 4.5321985 8.7170742 11.0958718 10.6498419 4.9245180 8.5609060 7.8359796 10.3266148 7.0478982 8.5847667 -0.4677329 10.3917337 3.7801316 6.9500519 8.8650858 6.3311570 3.4390912 9.1868348 7.9500513 10.3192852 -0.4677329 15.0558833 NA 10.1077381 -0.4677329 7.9028864 5.8176002 7.9028864 8.8199111 13.396846 4.439091 8.323362 12.825096 10.711486 11.004890 13.045680 11.838545 9.497983 9.843947 13.493558 8.838261 7.880927 9.422463 NA 7.462937 11.477277 10.965784 4.702126 8.987526 8.714593 6.924517 10.076477 6.915903 8.933078 11.123721 8.509479 1.117163 3.339551 5.505122 10.052818 10.490026 6.966827 10.008945 9.515192 4.486393 12.825791 10.022047 10.955840 10.302863 10.649192 9.710864 10.506613 6.661482 2.991626 8.921228 5.086788 11.437210 6.609015 10.897428 10.210799 7.211679 14.757256 10.577276 10.191303 12.272190 10.790176 9.887550 2.339565 TCGA-GM-A2DA 46 1 6593 5909 breast stage iib t2 n1b m0 female 1993 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 4 NA NA 3 4 3 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 3.121176e-07 10.6471810 9.0873936 10.7297518 7.6578858 8.1955425 9.2428483 9.7840629 10.4948523 9.8381157 11.7223533 11.4445945 10.0974374 1.7036766 15.4804651 3.7036877 9.8243593 6.0729226 8.9704761 8.5449919 12.4888694 0.1187584 13.5410546 3.7036877 10.0256176 10.1861613 7.1521499 1.1187584 9.7822672 9.3085516 3.7036877 8.1299542 7.0494641 1.1187584 5.1631203 9.1130803 10.2454314 9.2785984 10.4784765 9.8551289 10.9836869 11.9531980 10.8346889 14.4611489 8.9320591 10.5270566 10.3011213 9.9875495 4.9260801 5.8191674 8.5196064 11.3696175 NA 10.9937083 5.0256180 7.7186397 4.4406533 10.5024313 11.9512214 10.2035353 11.9963945 12.8775747 7.7186397 10.6704352 10.3607100 11.1208387 10.7867255 3.7036877 11.6471811 10.2298626 NA 10.0583062 8.4361393 3.8191674 3.2886539 10.5832727 10.3583255 9.8381157 9.5924327 2.1187252 8.9767079 13.2856746 12.4133477 9.2298626 10.0656332 0.00027728 0.00027728 0.47341000 -0.00083160 -0.00083160 -0.00318590 -0.00193060 -0.00083160 -0.00138580 -0.40263000 -0.00083160 0.37523000 0.01098200 0.01098200 0.37594000 -0.00027724 -0.00027724 0.00431620 0.00805670 0.00346870 0.01000600 0.00624810 -0.46717000 3.65690000 1.75130000 0.02482900 0.02482900 0.02482900 0.01419000 0.01391100 0.00027728 0.00346870 -0.00083160 0.00930980 -0.51331000 -0.00193060 -0.00124730 -0.00083160 -0.00138580 -0.00249680 0.00666530 0.00666530 -0.40635000 -0.00156100 -0.00156100 -0.00156100 0.01265500 0.01098200 0.01098200 0.00208050 -0.00027724 -0.00027724 -0.00027724 0.00431620 0.00805670 0.00805670 0.00346870 0.01000600 0.00624810 -0.48621000 -0.48239000 -0.47702000 -0.08559000 -0.47723000 0.02482900 0.01419000 0.01209700 -0.48218000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 0.000 9.6205641 12.7573891 3.7036877 10.0859532 3.8191674 11.1278557 4.1187252 0.1187584 8.6540022 7.1955425 NA 8.1576461 3.4406599 10.6245385 9.7130515 1.1187584 9.8139553 9.4406551 8.3713925 9.8122139 9.3072664 7.5699384 11.1173174 0.1187584 8.5365794 9.7661853 4.5110442 1.1187584 11.3239093 2.7036987 13.4335934 12.0714682 7.9131425 9.8364034 8.8835985 9.6225526 8.3232980 1.7036766 1.7036766 1.7036766 8.5781587 10.9998409 10.9673499 7.0845108 8.3650398 6.9000867 11.4355741 6.0729226 9.0465050 0.1187584 10.3547412 2.4406599 5.3281794 9.6038116 6.7186397 7.1521499 9.4915920 8.4981052 10.2075151 NA 14.3761884 NA 10.2415549 NA 7.9389062 5.9260825 7.6422886 7.9952437 11.628309 5.791152 8.569938 15.480465 10.597497 10.200876 12.488869 11.751722 8.945276 10.212805 13.439950 10.348747 8.519606 9.590402 2.926075 7.711184 10.884427 10.972036 6.926081 9.190189 8.376115 6.832972 10.159619 8.333046 8.832973 11.444594 7.951617 2.926075 4.440653 7.275164 10.096007 10.207515 7.839826 10.334260 9.454117 7.769778 13.796284 9.278598 11.012028 9.829533 9.306079 9.590402 10.222015 7.195542 5.366654 9.977796 7.762583 10.993708 7.001370 11.200876 10.502431 7.163121 14.340766 10.636396 11.000606 11.701339 10.402973 10.122947 1.118758 TCGA-GM-A2DB 62 0 NA 2406 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 5 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.254182e-06 3.467973e-07 9.4362256 8.5337926 10.5330670 7.1616529 9.1080722 10.6825993 9.5496705 11.2124089 10.3775907 13.8991823 10.5029868 10.8446479 3.5766914 12.0800196 4.4346749 11.5924542 7.0196341 9.0113190 5.0029545 12.2950096 -0.4233328 6.7365616 6.3448746 8.6170354 10.6508322 7.0605068 2.8986147 9.3727304 13.3353304 1.1616297 7.3968693 7.2631913 NA 3.3840498 9.5823153 9.7751358 9.3332471 9.6628270 9.4715086 10.9533588 8.5103812 6.6427795 14.4063640 6.2846011 9.0175598 10.1812440 9.9998067 6.6101139 4.5766914 8.8873035 13.9292860 NA 10.5667947 4.4835836 6.1766040 4.2771293 9.4970437 11.8449403 10.2883578 11.0376585 12.7712937 7.4895799 10.4284398 9.7264379 10.9143127 10.0185975 3.0361165 11.3812252 9.0884435 NA 11.3535350 8.1728805 3.7751875 5.9342428 8.7910098 9.2823230 9.8031030 8.9732956 1.5766672 9.3678537 12.6766960 12.5926284 9.9871421 10.0217055 -0.00041585 -0.00719580 -0.01684100 -0.26673000 0.70232000 0.10170000 -0.05199100 -0.26757000 0.26341000 -0.14387000 -0.05037000 0.23504000 0.18177000 0.17498000 0.00000000 0.23581000 0.22638000 -0.00968060 -0.00360110 -0.25152000 0.65167000 0.00332990 -0.26259000 -0.13678000 0.00277450 0.02918400 0.00805670 0.03976100 0.01153900 -0.00041585 -0.02616700 0.13658000 -0.27212000 -0.25285000 0.10526000 -0.05199100 -0.05469000 0.04414800 0.26341000 -0.28430000 0.69802000 0.35724000 -0.14387000 -0.40030000 -0.40030000 -0.18710000 -0.18710000 0.17498000 0.41764000 0.23752000 0.00000000 0.14965000 0.13672000 -0.02279000 -0.00360110 -0.01381500 -0.24594000 0.73000000 0.00332990 0.03429000 -0.26259000 -0.13678000 -0.04563500 0.03877100 -0.47870000 -0.01188700 -0.10172000 -0.20921000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.716 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 0.000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.716 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 0.000 8.5568302 11.8955160 1.5766672 8.6210848 4.9154731 10.9008713 4.8620943 0.5766672 9.8043067 8.0725459 NA 6.2909367 6.7466164 11.7590851 9.5893154 3.8986147 7.2277420 8.6265392 9.6032142 11.6819446 9.0782095 6.5424747 10.4470555 NA 8.0605068 9.7162421 4.5766914 NA 10.3792071 NA 13.5120400 12.9360285 7.2277420 9.0320179 9.1177875 9.3856549 2.7466137 2.1616620 NA 8.4654342 8.9386345 11.4639114 10.3448751 3.3840498 10.3984966 10.8799007 10.0963270 6.4715078 9.2420268 1.8986340 10.0715463 2.5766914 3.8986147 10.4242336 7.3425574 6.1465473 8.2805945 6.6101139 8.2736581 9.3198421 13.9257646 1.5766672 11.6336671 -0.4233328 9.4684744 3.6641528 8.5596845 8.5511053 12.214925 8.044296 9.670768 12.080020 9.751617 11.206047 12.295010 7.981832 8.960395 9.482078 12.644293 9.599058 8.887303 7.434672 3.483584 7.068544 10.243802 10.368668 4.384043 9.433116 8.979703 7.716242 9.236847 7.669448 7.679978 10.502987 9.225947 4.824620 4.862094 8.144875 11.613895 10.072546 9.945197 10.765898 7.297790 6.565375 12.702212 9.333247 11.017560 10.751616 9.900871 9.044296 9.782484 7.131280 7.669448 9.823847 9.066539 10.566795 5.131281 9.929838 9.497044 8.080914 14.166400 10.965246 11.170082 11.731192 11.655509 8.634683 1.161630 TCGA-GM-A2DC 57 0 NA 2535 breast stage iia t1c n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 1 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 3.81477e-07 1.733986e-07 10.5785638 9.7836721 11.5076841 7.2745897 9.2656406 8.9145660 10.5435592 8.9894660 9.7409561 13.4812156 11.8866960 9.8873213 1.4518573 13.5961989 -0.8701235 9.9564797 6.5975371 8.6613128 4.8023587 12.8363193 1.9372691 14.8738190 1.1299424 9.6940808 10.9726744 8.4013941 NA 8.2305936 6.6768259 4.7148939 8.9596540 6.0247496 NA 3.5893680 8.6076895 9.5832018 8.9227215 9.4686676 8.3611525 10.3289900 3.7148939 10.1460430 13.9515558 8.0809827 10.7782888 10.1348539 10.5970273 4.1299341 7.4918747 8.1214532 11.6864373 0.7149269 10.2456252 4.0841238 5.1960208 4.0841238 8.7574650 12.1341517 11.0517722 11.5356046 12.4943395 8.6036371 11.5551472 10.5011633 10.6554521 10.7674618 2.5893560 11.2537293 11.9012144 -0.8701235 10.2508171 9.6816395 2.3062622 3.9372879 9.4819748 8.8390151 10.6983624 10.4456469 0.7149269 11.4251262 13.0354123 9.8873213 10.1383599 9.6797158 0.97605000 1.53380000 1.49530000 0.00444110 0.00444110 0.00000000 0.55390000 -0.64227000 -0.63661000 1.57790000 2.17560000 2.04010000 0.78659000 -0.63017000 -0.00021555 -0.00021555 -0.00021555 0.02763800 0.02763800 -0.66204000 0.05936600 -0.03871400 1.54430000 0.59746000 0.59746000 -0.57773000 0.49510000 0.49510000 0.58596000 -0.05603800 -0.08094000 -0.05900000 0.00444110 0.00097064 -0.00989310 -0.01367700 -0.01367700 -0.64227000 -0.63661000 -0.63661000 0.60684000 0.00763920 -0.00221680 -0.06362000 -0.06362000 -0.06362000 0.00791750 -0.64010000 -0.00981850 -0.00021555 -0.00021555 0.00388540 0.00388540 0.02763800 0.02763800 0.02763800 -0.64029000 -0.58847000 -0.05357800 -0.64762000 -0.63642000 0.59746000 0.44257000 -0.56793000 0.49510000 0.55142000 0.90150000 0.58220000 0.000 -0.641 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.642 -0.642 0.607 0.607 0.759 0.759 0.000 0.000 0.000 0.000 0.000 -0.641 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.642 -0.642 0.607 0.607 0.759 0.759 0.000 0.000 0.000 0.000 7.6652066 11.4083807 2.4518573 9.2279634 3.0464037 10.7414172 2.2998601 NA 9.0186745 6.5136360 NA 5.6217852 1.7148829 11.0826725 8.9847995 2.4518573 7.0841281 9.4863831 6.0247496 11.2456252 9.7718745 6.6297777 10.6627742 0.8610819 8.9080083 8.9340623 2.5893560 -0.8701235 11.2154037 2.4518573 12.4000806 12.1148837 7.3345021 9.3920261 6.9564795 10.2180569 3.7737854 3.0368198 -0.8701235 2.9372879 8.6806781 10.1892757 9.6969366 3.8303669 10.0486678 6.5136360 9.9372861 4.7737854 10.1564546 NA 9.7007357 NA 4.8303720 9.6816299 7.6783677 1.4518573 9.1256984 6.8372898 5.5893620 2.7148829 13.7082450 NA 10.2904330 NA 8.0125743 5.3967178 7.7629261 7.8129256 14.3994181 5.1072108 9.1171953 13.5961989 9.3527261 11.0536301 12.8363193 12.7931558 8.8041236 9.9080084 12.9720851 10.5939664 8.1214532 9.6931275 0.7149269 7.6921740 11.6838005 10.7186459 7.8372905 8.5603837 9.4563608 8.0125743 10.1798683 5.8023561 8.7186459 11.8866960 6.9501103 -0.8701235 4.2592122 6.5073158 10.0993178 8.5624733 9.0087026 10.2034034 9.8346995 4.4874863 12.6040415 8.9227215 9.9340622 10.2929518 12.1671350 8.4653215 10.4891318 8.2094158 NA 9.5501020 4.8578516 10.2456252 5.3587514 11.6828404 8.7574650 7.4060553 13.2439175 10.4697813 10.6997869 12.1118552 9.1619771 10.1750083 -0.8701235 TCGA-GM-A2DD 53 0 NA 2282 breast stage i t1c n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 9.5521065 9.1762395 10.6347787 7.7247601 8.3516067 9.3186418 9.4421336 10.4179552 10.5838976 12.3246037 10.2521098 10.5605901 -1.0235630 12.9707438 5.1058499 11.0938856 6.1263142 8.4563474 7.3986317 11.7969456 NA 10.1564763 4.3341177 10.6363447 10.9394632 7.2573379 2.5615217 11.0325274 11.2122823 1.2984824 8.1006886 7.6770071 -1.0235630 5.2053847 8.9849957 10.3450736 9.5079486 9.9021217 9.1032718 10.4457002 3.4360019 6.9595604 14.9287624 7.3743275 9.0981008 10.8380419 10.3933647 4.2984970 3.1464923 8.4400918 11.7488818 -1.0235630 10.8047037 6.9481102 7.5502142 5.5912785 9.9183485 11.6759228 10.3324688 11.9034191 12.2883155 8.2642798 10.7019335 9.6856509 10.6946719 10.5191155 3.3688801 11.2521098 9.2468624 -0.0234164 10.5229794 9.0127407 3.3242346 7.1058499 11.1893675 9.4380466 9.7652856 9.3912524 1.2984824 10.0929112 12.6645989 13.4667913 9.9842953 10.2053859 0.12491000 0.13214000 0.12491000 0.57380000 0.26059000 0.07264200 -0.07747800 -0.15055000 -0.15055000 -0.25612000 0.25887000 0.25887000 -0.03108600 -0.13833000 -0.09208100 -0.16124000 -0.16124000 0.35561000 0.02182500 -0.24302000 0.05879500 0.34437000 -0.12200000 -0.16841000 -0.16841000 0.11932000 0.10865000 0.10865000 0.33060000 0.06565600 0.12491000 -0.23901000 0.05523000 0.07305500 0.04358200 -0.12797000 -0.12797000 -0.06222600 -0.15055000 -0.15055000 0.21606000 -0.12252000 -0.25612000 -0.03849100 -0.03849100 -0.03849100 -0.01491600 -0.13833000 -0.19074000 -0.29307000 -0.05980700 -0.16124000 -0.35179000 0.35561000 0.02182500 0.02182500 -0.24302000 -0.07334300 -0.09855000 -0.09802300 -0.12200000 -0.16841000 -0.03228700 0.11932000 0.10865000 0.31930000 -0.00035489 -0.06155500 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 0.000 9.8430734 13.1108331 6.4028313 9.4724222 5.5766279 10.7967462 4.9307657 1.2984824 9.5903567 8.7903485 NA 7.3299784 3.5615339 10.8637878 9.5615297 0.9765836 9.5755502 8.5157259 8.3029966 11.7379106 9.5327858 7.1006886 11.1218626 4.0209644 7.7871386 10.3704939 10.2059869 NA 10.9047154 2.4360019 13.0574680 12.7708815 7.8984079 9.5349880 10.2849062 10.3779801 6.1364396 2.6770120 -1.0235630 3.2244880 8.9849957 10.6809032 9.8015260 5.7709823 8.4946892 7.8189176 9.9087820 5.5001296 9.2723361 -0.0234164 10.5030664 3.0640378 4.9307657 9.8890076 6.8342991 5.8954311 9.3252953 8.8819542 7.0318495 7.2244947 13.9348933 1.2984824 10.8200957 -0.0234164 7.5464230 5.8469320 8.2244947 8.4195107 10.925766 7.440092 8.979382 12.970744 10.344528 11.429838 11.796946 9.806290 8.362430 10.150869 13.322250 10.619973 8.440092 8.596787 2.146492 7.210187 10.583435 11.270901 4.859209 9.603180 8.166392 7.368884 9.617029 8.670054 7.271188 10.252110 10.121863 2.783918 4.704490 7.652806 10.175012 11.013428 8.034884 9.392309 8.210187 7.631203 11.380466 9.507949 10.598619 10.039288 9.679606 9.774229 10.019594 7.121226 -1.023563 9.762518 7.161442 10.804704 6.515727 10.610017 9.918349 7.521454 14.161636 10.737287 10.922742 12.118993 11.188151 9.012741 2.298482 TCGA-GM-A2DF 53 0 NA 2155 breast stage iia t1c n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 9.8243645 8.5718364 10.5254186 7.7200281 9.1286105 8.2370034 9.3163951 10.7387976 12.6310346 13.0336884 11.1100535 9.7640055 1.3276874 11.4541568 2.5907457 11.1869346 5.0718699 9.1286105 9.4549309 3.7606681 NA 10.2207085 7.6711185 10.1407091 10.0036674 7.7131418 1.0057593 9.4066619 11.2309898 2.8131347 8.2725687 6.8001984 NA 8.0905909 8.1606006 9.9951768 8.8275564 9.1807081 8.9902007 11.0789197 3.7606681 7.8699682 15.5654881 7.4403269 9.3265830 10.0624201 9.8807637 3.6496385 -0.9942407 8.9201676 9.6405935 NA 10.5651594 5.6204926 6.7673330 6.3808212 8.9816304 11.5514708 10.3009773 11.2066809 12.1102173 7.5603711 10.5982394 9.7657204 10.2152357 10.6909691 3.0057772 11.8477398 8.0529060 NA 10.3528500 8.9305948 3.4652170 5.1956074 9.0678285 9.9744492 10.5570100 9.4151732 0.5907218 4.2152359 12.3989046 11.9072150 9.4805022 9.7421843 0.000000 0.122510 0.137070 0.401160 0.212870 0.297290 -0.256330 0.328230 0.328230 1.126000 3.413400 0.398340 0.379620 -0.036491 0.189250 0.189250 0.076759 0.105170 -0.059314 3.656900 -0.062315 0.149100 -0.272320 0.031484 0.031484 -0.079165 1.251300 -0.239810 0.124220 0.114670 0.125510 -0.241060 -0.116880 -0.283420 -0.236760 -0.245290 -0.245290 0.328230 0.328230 -0.385340 0.189700 0.554130 -0.258130 0.484980 0.089176 -0.255350 -0.255350 -0.036491 -0.036491 -0.258980 0.189250 0.076759 -0.250890 0.105170 -0.044402 1.752500 -0.251240 -0.062315 -0.252690 -0.055115 -0.272320 0.031484 -0.092301 -0.088992 -0.239810 -0.267530 0.416360 0.133070 0.380 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.143 0.124 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.228 -0.101 0.116 0.116 0.140 0.398 0.485 0.230 0.000 0.000 0.380 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.143 0.124 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.228 -0.101 0.116 0.116 0.140 0.398 0.485 0.230 0.000 0.000 9.581321680 13.527076067 0.005759269 9.992335506 4.936520163 11.241198270 3.465217014 5.291183595 9.334457214 6.882299451 5.649638450 7.945361311 3.959974121 10.598239387 9.238203369 4.432044074 9.212796687 10.055630864 6.513577595 10.168802970 8.308878233 5.575639079 12.028670291 2.135075130 8.499637837 9.856750449 3.093239016 NA 10.888425380 2.005795193 13.400914796 13.634512670 7.568024502 9.980913854 9.254895864 9.489598126 2.465217014 2.706221094 -0.994240731 0.005759269 8.770653983 11.227973505 10.526401035 5.544939712 9.945860929 8.753975177 9.545910469 5.175708220 9.690530937 -0.994240731 10.763589012 1.590721770 3.959974121 10.523525594 8.597547934 9.409859524 9.274909005 8.726881612 12.001372866 6.028149189 14.019759224 3.253717034 10.835901343 NA 10.512089968 4.813134719 9.327710490 8.028150294 9.585673 10.622331 9.402387 11.454157 10.446651 11.192516 3.760668 11.210659 8.651441 9.711415 13.132406 10.785502 8.920168 8.063774 1.590722 7.517535 11.483288 9.985921895 4.363332302 9.347834823 8.481515707 6.787142496 8.975629327 7.376470119 7.501637383 11.110053504 10.562767309 1.005759269 8.936519574 8.885334892 11.319515708 10.451314570 7.646027254 9.609408701 7.586983112 8.909664214 12.030584379 8.827556433 10.124074643 10.799791980 9.913424112 11.090922815 10.099860093 7.885365705 0.005759269 9.038365393 10.569931822 10.565159404 5.028149189 10.838672366 8.981630354 7.389486794 14.888783311 10.732426256 10.829945543 12.067997178 10.903249662 8.770653983 4.497637911 TCGA-GM-A2DH 58 0 NA 2193 breast stage i t1c n0 (i+) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 2 4 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.017137e-06 6.589149e-07 10.0040208 9.8924765 12.2088527 9.7780214 8.6662528 10.2162242 10.2453389 10.5546289 9.4648506 13.5831404 12.5732053 11.1609429 -0.9392608 12.5236591 2.8681336 8.2256803 7.1666823 8.5068229 8.8256451 12.7805900 2.9676666 13.7333921 7.4891335 9.4750729 11.3944878 5.5999337 NA 11.9822425 11.6998880 1.3827226 7.1823069 6.4050700 -0.9392608 3.3086958 11.8404928 10.4031259 9.0726994 10.6611510 10.9963068 11.2817563 3.3826949 10.4144716 14.4875132 7.0051338 10.4849397 11.0595401 11.7694263 5.1051668 3.7886961 10.2325757 12.3783273 NA 11.2885398 5.4006233 7.6153626 5.5202054 8.7886939 12.2693126 9.7234418 11.2433229 13.1776047 7.5324487 10.9166152 10.4905228 11.9224419 11.7427804 5.5283775 12.4074949 10.1204559 0.3827226 10.4762511 9.1375891 4.0857985 5.6382013 9.4034037 9.7793063 10.2082963 9.6023541 4.0831453 7.2775190 13.1604911 12.3530951 10.6213451 10.2012837 0.128150 0.128150 0.207630 -0.110240 0.889660 -0.218120 0.337070 0.024548 0.329310 -0.080940 -0.080940 -0.208210 0.222770 0.222770 0.105120 0.105120 0.105120 0.076566 0.169110 -0.336990 -0.121480 -0.121080 0.091155 0.091155 0.071248 -0.154520 -0.154520 -0.154520 0.060245 -0.005261 0.128150 -0.455110 -0.110240 -0.218120 -0.218120 -0.352020 -0.352020 -0.322050 0.329310 0.329310 -0.427020 -0.410800 0.165950 0.276160 0.276160 -0.121870 -0.022469 0.222770 0.308570 0.093040 0.105120 0.105120 0.105120 0.076566 0.036973 0.036973 -0.095120 -0.121480 -0.643870 -0.103920 -0.373350 0.071248 0.072540 -0.154520 -0.154520 -0.103030 0.437500 -0.366460 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.136 -0.136 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.136 -0.136 9.7180919 12.7883748 7.4807337 9.6296796 5.8089667 11.2750926 4.8551874 1.9676482 8.9796367 8.2219051 5.3461768 8.8567483 1.0607392 10.7644608 9.1455819 6.9464700 9.9303673 10.6485509 9.0628853 10.0040208 9.1965854 8.1574884 10.0294402 2.0607737 8.2092501 9.4995653 4.2105213 -0.9392608 10.3172770 5.2505978 12.7309871 12.3408917 7.5586250 9.8384397 10.4749301 9.4722845 7.6363128 3.0149622 NA 7.2406826 8.7775930 8.8897032 11.6288483 3.5526230 9.1632479 7.2332007 10.0814062 6.5283791 9.9039094 NA 10.9166152 4.7472746 3.8681237 9.8718430 7.7056573 6.0437666 8.9959384 8.3905697 6.3368975 1.0607392 12.7960121 0.6457017 10.6280165 NA 7.5385320 3.5202085 8.4292799 9.0323169 9.305595 8.721661 8.437984 12.523659 9.697851 10.791244 12.780590 8.279942 9.544085 11.217805 13.212385 9.849900 10.232576 8.096947 3.584337 8.547608 11.712274 11.6944498 6.7082314 8.7384929 9.6258756 9.9187544 11.3422413 8.5273597 7.6681035 12.5732053 10.0054855 -0.3542061 5.2702262 9.2546436 9.3849540 11.1126621 7.0747944 9.7158568 10.2400605 7.7937886 11.6707347 9.0726994 9.8777570 10.3886067 11.5624862 9.8335003 10.8837425 10.1170724 9.2787312 10.1244819 7.8139902 11.2885398 9.5979918 11.1461895 8.7886939 7.9586188 13.4643181 10.2820584 10.6639361 12.3019373 11.5631080 9.6382022 1.5201959 TCGA-GM-A2DI 52 0 NA 2590 breast stage i t1c n0 (i+) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 5 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.773791 10.166823 11.695771 10.457231 8.125528 9.782241 11.087744 10.179673 10.654234 13.532754 10.819350 10.759377 4.469359 11.914965 2.246955 9.816822 4.416894 8.519985 7.501207 12.239668 1.662023 12.627968 6.662003 8.999625 10.088268 7.775746 -0.338068 11.723375 9.239432 3.121430 8.947406 8.337960 -0.338068 5.054319 10.243204 10.694738 8.778348 12.705544 10.285885 11.468553 3.909927 10.651398 15.357966 8.061260 10.197279 11.318428 11.172273 4.054319 2.469365 9.438437 11.880264 NA 11.330445 7.598641 8.532368 4.568896 10.568143 11.614745 9.977153 12.573396 12.965642 7.513753 10.663412 10.239045 11.185075 11.671832 5.276713 12.112699 10.593480 -0.338068 10.462903 9.246966 1.621759 8.741488 9.415220 10.513753 10.486962 10.188503 3.662000 7.711852 13.112828 13.316528 9.758719 9.512190 0.02479200 0.02479200 0.03990200 0.00249690 0.00249690 -0.17266000 -0.01152700 0.00708260 0.00708260 0.00208050 0.00208050 0.01796300 -0.01381500 -0.01381500 -0.10442000 -0.10442000 -0.10442000 -0.10880000 0.04840400 0.00291330 0.00332990 -0.00429290 -0.15476000 -0.15476000 -0.15476000 -0.00124730 -0.00124730 -0.00124730 0.19360000 0.02479200 0.02479200 -0.00857660 0.00249690 -0.17266000 -0.16841000 0.00485790 0.00485790 0.00708260 0.00708260 0.00708260 0.91602000 -0.19837000 0.00208050 0.00000000 0.00000000 0.00000000 0.00000000 -0.01381500 -0.01381500 -0.10442000 -0.10442000 0.00069327 0.00069327 -0.19325000 -0.20261000 -0.20261000 0.00291330 0.00332990 -0.00429290 -0.20709000 -0.15476000 -0.15476000 -0.08943400 -0.00124730 -0.00124730 -0.02219500 0.00449960 -0.08956700 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.014 -0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.014 -0.198 0.000 0.000 0.000 0.000 0.000 0.000 10.7388192 13.0384003 8.3379603 10.3085622 6.0661236 10.6767215 6.0882688 0.6620232 7.9004086 7.6506885 0.6620232 8.1680929 0.6620232 10.2840553 9.5027815 -0.3380680 11.1296091 8.9450918 11.4665380 9.7925741 8.9698418 8.0370428 10.7193184 3.9099267 6.3899247 10.4596650 6.8811715 -0.3380680 10.7580598 2.4693651 13.2592414 12.1480843 8.5748928 10.1306276 8.9906784 9.2394324 5.6161989 1.9839330 -0.3380680 5.2165907 8.7468119 9.4482731 9.9657843 5.3899247 5.7673873 5.6843727 9.7159294 6.1697988 9.1111521 -0.3380680 10.6263444 4.9839330 3.8319279 8.7923940 5.7390326 7.5808668 10.1059831 9.3130551 9.2785524 NA 13.7611047 2.2469553 10.2146726 NA 7.9973940 4.6161989 7.6045184 8.8956231 11.991640 4.909931 7.738819 11.914965 10.376249 9.738819 12.239668 12.482781 9.032691 11.207451 13.591817 11.200677 9.438437 8.504354 2.246955 6.801554 11.666926 11.704689 5.592741 9.604518 8.320215 8.141784 10.347129 9.467747 8.058608 10.819350 6.348503 -0.338068 5.334429 7.417759 11.063950 11.386091 8.432403 7.919391 12.784023 8.767912 11.465210 8.778348 10.551507 9.377966 11.081964 10.095589 10.676721 9.813020 -0.338068 9.878689 9.077745 11.330445 7.298628 11.274411 10.568143 8.001853 14.267194 10.278552 10.491726 12.889469 10.838177 9.441723 3.469352 TCGA-GM-A2DK 58 0 NA 2645 breast stage i t1c n0 (i-) m0 female 2005 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 9.97486382 9.08148610 10.86083744 7.30115686 8.77439076 8.55252155 9.79852057 10.66982836 9.68785977 14.37522577 10.76098485 10.26753404 1.25241566 13.29028786 3.38989716 10.22910504 5.01793081 8.60112598 9.75701824 12.60774887 NA 13.43267993 2.38989716 10.08146719 10.13136826 5.15929011 -0.06960327 10.02445502 9.55709125 NA 7.66517956 7.43031538 -1.06945188 3.32279345 9.11905861 9.22164028 9.55343654 10.04746341 9.65327718 10.34621142 4.01793081 10.83133646 14.23799070 8.03409849 9.78143775 10.33986058 10.74945122 3.93047242 5.77595918 8.33773740 10.48217791 NA 10.22164041 7.01793304 5.17839595 4.81311419 10.83322162 11.37133882 10.04746341 11.52012082 12.23596147 8.62046765 10.77439076 10.17367938 10.50222228 10.07193827 2.93047242 11.27059797 10.24844755 -0.06960327 10.44567674 8.44222238 2.38989716 4.90775115 10.35987637 10.14478874 10.14782156 9.62308514 2.73781653 8.08275474 11.58957363 11.72468246 9.36405518 9.54517957 -0.00650500 -0.00650500 -0.00650500 0.00404110 0.00777830 0.01028500 0.02188400 0.00444110 0.00444110 0.02188400 0.02188400 0.02188400 0.47204000 -0.51125000 -0.01009400 0.40928000 -0.00539920 -0.51712000 0.45615000 0.00027728 0.01698500 2.73220000 0.33254000 0.33254000 0.33254000 -0.05077600 -0.05077600 -0.05077600 3.65690000 -0.00650500 -0.00650500 -0.06826100 0.00777830 0.01028500 0.01028500 0.00444110 0.00444110 0.00444110 0.00444110 0.00833510 -0.00138580 -0.00138580 0.02188400 -0.00193990 -0.00697710 -0.00697710 -0.00697710 -0.48733000 -0.48733000 -0.01009400 -0.01009400 -0.00539920 -0.00539920 -0.51712000 0.45615000 0.42663000 0.00027728 -0.52133000 -0.01574100 -0.01917700 -0.20573000 0.33254000 0.00416320 -0.05077600 -0.05077600 -0.01147300 -0.00705760 -0.54492000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6853571 12.2585836 5.4382629 9.8715173 2.7378165 11.3065951 1.9304724 1.7378165 8.8131126 8.7665200 NA 8.0394121 4.0179308 11.1460027 9.3525345 3.7884456 8.6395534 9.3130937 8.3462114 10.4011286 9.8673946 6.9748643 11.8821187 NA 8.3837401 9.3888762 5.7506494 6.3141745 10.4362813 3.5154349 12.6431041 12.5636920 8.1103789 10.1676797 7.9638925 9.8046827 2.7378165 1.9304724 NA 4.6583886 8.5340959 10.7362135 9.6455736 7.2296773 7.0571221 10.2830648 10.2874717 4.3899040 10.0629694 1.2524157 9.8207339 1.9304724 3.3898972 9.7187149 6.6581858 4.2158727 9.3703005 9.1387042 7.2703196 NA 14.0378502 0.9304724 11.0308035 NA 8.8991363 5.8252870 8.3334819 9.1128640 13.46272818 5.91915413 8.59580573 13.29028786 10.11534504 10.17721022 12.60774887 14.64664608 7.92855213 9.06746071 12.83792371 10.80621900 8.33773740 8.86416045 -0.06960327 7.04941077 13.27469622 10.9752053 5.1003932 9.6744456 9.1592883 8.0099546 10.2353970 6.0802163 9.9063176 10.7609848 8.0878166 0.5154097 6.0072852 8.0207144 9.2836165 10.4372731 7.4735012 10.4984257 9.7402378 4.5154349 11.9264029 9.5534365 9.9535309 9.8016049 11.0258667 9.3744492 10.2019328 8.0232271 -1.0694519 9.8887469 5.9191541 10.2216404 5.9304701 11.1479034 10.8332216 7.0442116 13.6735158 10.6156565 10.7798748 12.0345770 10.8207340 9.6532772 2.1004058 TCGA-GM-A2DL 50 0 NA 3519 breast stage i t1c n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 1.733986e-07 9.58156460 9.44972829 11.22903622 8.49941541 8.60619643 9.13966032 9.98926349 10.09560524 10.54926399 11.81795827 11.46880200 10.32331343 NA 11.78847373 3.55830437 9.98926349 6.69581291 8.31746507 7.34908126 12.83815186 0.49937395 13.11020964 7.04373601 9.44680892 10.27968184 5.46904264 1.49942497 12.20893014 10.10365984 2.91444972 7.57623112 6.91445330 -0.08558856 4.46903938 9.29057830 10.70886886 9.07179994 10.49376890 9.81531973 11.45748477 3.08437046 10.90207230 15.45264190 8.26746744 9.65170040 10.74139864 10.35480310 3.37388481 3.82134286 8.85550048 11.88563724 NA 12.17654780 6.18123974 6.30677078 6.25430303 10.04180246 11.60793991 10.44534692 12.09187253 12.71999534 7.88023737 10.74852891 9.15967283 11.37848811 10.87951571 2.91444972 12.06006674 11.46086515 -1.08558856 10.59085086 8.82584508 3.16767906 5.64237234 10.44046308 10.06546945 10.13664411 9.43703460 4.89173511 9.40530381 13.45941740 12.70500511 9.48335912 9.91656472 0.00790170 0.00790170 0.00678860 0.00081620 0.00081620 -0.01672000 -0.00084734 0.01250000 -0.00140150 0.00901540 0.00901540 -0.00845420 0.01231300 0.01231300 1.52340000 1.67890000 -0.00638250 0.02565500 0.00000000 -0.54876000 0.01054800 0.02551500 -0.51497000 -0.51497000 0.00512010 0.01277900 0.01277900 0.01277900 0.02945000 0.04682600 0.00790170 -0.00154010 0.00081620 -0.54180000 -0.01672000 -0.00084734 -0.00084734 0.01250000 -0.00140150 -0.00140150 0.52099000 0.52641000 0.00901540 0.01250000 0.01250000 0.01250000 0.01250000 0.01231300 0.03847300 -0.53064000 0.05992000 -0.53643000 -0.53603000 0.00359180 0.00000000 0.00845850 -0.53937000 0.01054800 0.02551500 -0.52976000 -0.51497000 -0.51497000 -0.54059000 0.02523400 0.01277900 0.02945000 -0.52400000 -0.51621000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.561911 14.723392 9.038574 10.083125 1.499425 11.345428 0.914488 1.236401 8.541987 9.114125 NA 8.736498 4.373885 10.453127 8.983231 2.721810 8.325964 8.830332 10.731836 11.040835 8.871410 7.276397 11.191740 2.001910 8.739412 9.811542 3.084370 NA 10.498946 3.001910 12.733335 12.405930 7.934043 9.616626 8.428181 9.771657 2.821343 0.914488 0.914488 6.438015 8.881679 9.786358 10.331251 5.529162 8.092420 6.942358 9.677665 4.721810 9.084378 -1.085589 10.286230 3.306773 4.236378 9.972939 7.022402 2.499425 9.593053 8.171841 7.809271 1.721810 14.163603 NA 10.402293 NA 7.586878 4.236378 8.012485 8.375933 13.808198 5.123906 8.954743 11.788474 10.002579 10.417782 12.838152 11.954914 8.803470 10.184164 13.209289 9.924981 8.855500 8.852562 0.914488 6.741002 11.088442 11.378743 5.845191 9.334413 9.004565 7.515220 10.380463 6.536505 7.017740 11.468802 7.361536 2.084370 5.759944 7.190670 11.479555 10.349602 6.280774 9.325964 10.009191 4.936822 11.924574 9.071800 10.505975 9.949252 10.565056 9.799387 10.274751 8.321721 NA 9.132895 3.868647 12.176548 8.578011 10.780959 10.041802 7.094362 14.369812 10.741399 10.248726 11.949768 11.496830 9.292748 1.499425 TCGA-GM-A2DM 57 0 NA 3226 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 white hispanic or latino NA NA 2 6 NA NA 1 1 3 5 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 10.3146790 9.8094720 11.7887856 9.8414785 8.2764655 8.9092565 10.9684291 10.0359487 10.0364805 12.8084603 12.0483960 10.7291682 3.2157718 12.0356826 2.3312466 9.9167873 8.2546885 8.1563278 10.0518200 13.2923626 2.0902437 14.8285998 0.9527063 9.7928523 10.7324546 7.5436962 NA 8.8144424 13.6278984 3.4887849 7.2157698 7.0861341 -1.3692218 2.3312466 9.8481591 10.3790000 11.5214515 10.3325468 9.9138954 11.4262381 5.0231267 10.7906785 15.2922652 7.6733691 10.4138054 11.7212504 11.3699549 3.4381598 1.6308248 8.9883592 11.1482305 -1.3692218 11.1913788 3.8787351 5.6531747 5.5376968 10.6251606 11.8180045 10.5526481 12.0793107 12.7114581 7.7703586 10.8557133 11.0364007 10.7966563 11.0327533 6.7030744 12.6529148 11.5877277 NA 10.6796346 8.9706573 3.0009735 5.5965923 10.5766167 10.2385998 10.6738345 9.5755192 0.2157407 4.7393297 13.9142935 12.2675450 9.9894584 9.5103903 0.00319100 0.00319100 0.00319100 0.00513590 0.00097064 -0.00144920 -0.00241230 0.00319100 0.00319100 -0.00263220 -0.00263220 -0.00263220 -0.00472930 -0.00263220 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 0.00047091 -0.00360110 -0.00360110 -0.00360110 -0.00069303 -0.00069303 -0.00069303 -0.00097017 -0.00276490 0.00319100 -0.01133600 0.00513590 -0.00144920 -0.00878950 -0.00241230 -0.00241230 0.00319100 0.00319100 0.00319100 -0.00166290 -0.00166290 -0.00263220 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00263220 -0.00375940 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 0.00047091 0.00027728 -0.00360110 -0.00360110 0.00000000 -0.00069303 -0.00069303 -0.00097017 -0.00912860 0.00104380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.6194915 11.6968963 8.4684351 8.4333234 2.8573242 11.5023274 0.2157407 -0.3692218 8.5195506 7.9069315 NA 5.2918724 NA 10.1597495 9.1415712 -1.3692218 4.8007343 9.2800634 13.4331216 10.6958867 9.6102538 7.8156824 10.7626641 3.7182739 10.7288392 9.7709978 3.1543726 -1.3692218 10.9176537 1.2157407 13.3070397 12.2700348 6.0486591 11.1269119 7.4154418 9.1815538 1.6308248 2.3312466 NA 8.4856756 9.4252230 10.3360075 9.3181828 0.6307782 7.6448275 6.5496707 10.5407003 2.5376937 9.4485902 0.2157407 12.6096070 1.9527436 9.7818238 9.9905183 7.3365083 NA 8.1326442 8.4841168 6.7022697 2.8007239 13.8827703 1.2157407 11.1234114 NA 9.3697439 3.5376937 7.8596261 9.5436965 14.228059 4.023122 8.593703 12.035683 10.377741 10.212949 13.292363 13.028281 9.258997 10.619492 12.855939 12.181434 8.988359 8.108565 1.800745 7.704949 11.119902 11.0150513 7.1266621 9.1034979 8.8475529 8.0401982 10.3552954 6.4573563 3.7600932 12.0483960 7.4605296 5.8787351 7.6779310 6.1196923 11.4035341 9.5965914 9.4224340 9.0454924 12.0756926 2.4381598 10.5210942 11.5214515 10.5714878 9.8125805 11.5220213 8.7792837 10.6123744 9.4284686 NA 9.5210107 1.2157407 11.1913788 5.0902395 10.7079566 10.6251606 6.9023631 14.4532784 10.2737613 10.3960932 13.2571436 10.0465489 9.8125805 0.6307782 TCGA-GM-A2DN 58 0 NA 3091 breast stage iia t2 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 10.4071473 9.3396233 11.5173513 8.5795743 8.9873214 9.8499825 10.2183019 9.5254899 10.7744898 12.5448929 11.3451944 10.2574642 2.4327457 12.6658388 3.4833644 9.7681231 7.4197934 8.8565989 10.3052976 12.5518591 4.4067407 13.7147455 6.0262578 9.3135669 10.7194555 5.9473061 0.6253640 11.5498192 9.6324051 0.9473295 8.6505172 7.8685516 NA 6.4391593 9.6083715 9.8691469 8.8685519 11.1457509 10.2131553 10.7833562 4.5561167 10.4995907 15.0047392 7.5645748 10.3197357 10.4911110 11.1036418 4.6026588 5.2547339 8.4050972 11.8746394 1.2103265 11.2962553 6.1331730 7.4582680 4.8921627 9.3118784 12.0801912 10.6278413 12.8220568 12.8150479 7.8421234 10.9481510 10.8306273 11.3999590 10.5288831 4.0516418 12.0098918 11.5211424 NA 10.3013349 9.1192332 2.5351572 6.3869282 10.3706319 10.0241214 10.2173675 9.6281929 5.1172296 9.8980076 13.4055074 12.7022769 10.0230524 9.8697416 -0.00664320 0.74385000 0.74385000 0.00000000 0.00000000 -0.00040425 0.06694500 -0.00332430 -0.00332430 0.00833510 0.00833510 0.00833510 -0.00469480 0.00194180 -0.00360110 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.02589300 -0.00269790 0.00332990 -0.05361100 -0.05361100 -0.05361100 -0.00152430 -0.00152430 -0.00152430 -0.00069303 -0.00664320 -0.00664320 0.00083195 0.00000000 0.00750000 -0.00040425 0.06694500 0.06694500 -0.00332430 -0.00332430 -0.00332430 0.00055459 0.00055459 0.00833510 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00194180 -0.00354200 -0.00360110 -0.00360110 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.00152430 -0.02589300 -0.00269790 0.00332990 -0.35825000 -0.05361100 -0.05361100 0.00180300 -0.00152430 -0.00152430 -0.00069303 0.00249690 0.01586600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6133523 12.3827678 7.2583729 9.3490388 3.2692277 11.6128195 0.2103889 -1.3744489 8.7814610 7.5531554 NA 7.0870204 2.9473108 10.2460558 9.5846553 2.4327457 9.0294548 9.7591622 9.7507912 9.9194241 9.6572995 6.8445463 11.2653968 3.9473015 10.0117792 9.9512454 3.4833644 NA 10.5479622 3.0848126 13.2279027 12.5655078 8.3344615 10.2884911 9.0610482 9.1847549 5.5442412 3.0848126 NA 7.6505176 8.4724350 10.0919641 10.0600060 4.0848126 8.8534630 6.8921639 9.8158199 6.1489402 9.8619899 NA 10.1011112 2.7953098 4.4582704 9.6274051 6.6065459 8.4067373 9.6393982 8.8384819 10.6680632 0.2103889 14.0136306 0.9473295 10.0273240 NA 9.0858336 4.6026588 7.7649293 8.6463578 12.617347 6.919999 8.612642 12.665839 10.449541 11.111459 12.551859 11.529824 9.229931 10.371052 13.543682 10.180926 8.405097 8.495742 -1.374449 7.413280 10.975488 10.924013 6.567892 9.171308 9.083784 9.017695 10.039593 7.849379 6.567892 11.345194 9.188574 1.947292 7.432732 7.597352 12.568076 10.489951 8.702193 8.761087 11.341769 7.965228 11.812649 8.868552 10.693484 10.010701 10.691130 9.876268 10.428298 8.405097 5.195233 9.737895 9.718135 11.296255 7.376922 11.116792 9.311878 7.243763 14.196034 10.158221 10.805909 13.035829 10.813658 9.301335 4.854195 TCGA-GM-A2DO 54 0 NA 2596 breast stage i t1c n0 (i-) m0 female 2006 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 2 4 NA NA 1 4 1 3 5 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.184823e-06 9.363527e-07 11.1700088 9.1115259 11.1835035 7.6705869 9.0160185 10.1217578 9.5881243 10.3737044 9.1669240 12.1160113 11.0816983 10.3949521 1.5620836 12.1868576 0.9770967 8.5620623 7.4200427 9.3629621 6.9657843 11.3618834 1.7298355 13.2275461 1.9770967 10.3379466 10.3324507 3.1470299 2.2990395 14.0594982 9.7731392 2.7844621 8.2532240 6.4033649 -0.0228300 5.8839898 9.2202736 9.6317357 10.2415422 11.9022831 9.8131500 10.4169305 10.5611226 10.4283108 14.1449097 7.5055146 9.5026204 10.8635583 10.2131138 5.3346505 -0.0228300 8.1914185 11.4923066 NA 10.8115707 7.0214942 9.0160185 4.3694176 10.0738147 12.3461516 10.2119170 11.4809253 13.2942295 7.7185664 10.6415468 10.3618834 10.8474643 10.0790753 3.8839922 11.5601823 10.7788080 1.5620836 10.2590296 9.1594940 4.8680348 8.4241827 10.7666333 10.4578898 11.0452061 10.4918136 0.9770967 6.9543790 12.4370434 12.5381488 9.6046335 9.9078369 0.00000000 0.00000000 0.00000000 -0.00539920 -0.00083160 -0.00332430 0.02595200 -0.00332430 -0.00332430 1.58930000 -0.01945200 0.34762000 0.00152550 -0.00758210 -0.00429290 1.69250000 -0.15733000 0.00332990 0.00332990 -0.01270000 0.00027728 0.00527490 0.01063600 0.01063600 0.13243000 -0.00041585 -0.00041585 -0.00041585 0.02567100 0.00000000 0.00000000 0.00166420 -0.00083160 -0.00802440 -0.00332430 0.02595200 0.02595200 -0.00332430 -0.00332430 -0.00332430 0.00041593 -0.00134140 -0.21251000 -0.00346270 -0.00346270 -0.00346270 -0.00346270 -0.00758210 -0.00758210 -0.00429290 -0.19715000 -0.15733000 -0.15733000 0.00332990 -0.00166290 -0.00166290 -0.00490570 0.00027728 0.00527490 -0.19843000 0.01063600 0.01063600 0.00235810 -0.00041585 -0.00041585 0.02567100 -0.02876500 0.02230400 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 0.000 11.2232464 11.5065301 7.3258280 8.6281513 8.7185664 10.8428329 8.5507468 NA 8.7779996 5.8839898 -0.0228300 6.1470237 -0.0228300 10.2717204 9.8854922 3.1470299 11.0001608 8.3991643 8.0269483 10.3672685 9.1086478 6.9657843 9.5201315 2.2990395 8.3213956 10.3357508 2.5620592 NA 11.2374311 4.1470217 13.4049362 12.0492322 7.2990276 9.7988735 10.7518866 9.3236133 3.9770967 6.1669243 NA 0.9770967 8.8036481 10.2047155 9.1166509 1.9770967 7.7072639 7.2250271 10.1012209 4.5006619 9.2601880 -0.0228300 9.1012209 3.9770967 6.7452844 9.3433125 6.0732354 10.9636527 10.3586425 9.0645625 10.6146302 NA 14.3032482 2.5620592 10.3313489 NA 8.4158913 4.0645639 7.7319869 8.1619748 13.9380219 6.3864902 9.5825791 12.1868576 11.0559175 9.8428329 11.3618834 11.4923066 9.2740158 10.1495271 12.8555337 9.2717203 8.1914185 8.3258276 0.9770967 7.8779663 10.6939191 10.745284 5.931295 8.698199 9.083008 8.577013 9.776235 10.284300 7.937101 11.081698 6.988327 2.562059 4.225028 8.884381 8.531688 11.813150 8.898941 9.763369 10.220274 9.388611 12.469151 10.241542 11.012586 8.886993 10.947924 9.430370 10.413811 6.403365 NA 10.087139 11.103159 10.811571 5.262501 11.465442 10.073815 7.280880 14.288351 10.135709 10.589047 11.936377 11.158873 10.523994 3.883992 TCGA-GM-A3NW 63 0 NA 3361 breast stage iia t2 n0 (i-) m0 female 2003 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.935946e-07 9.972699 9.300240 10.983535 7.322062 8.690542 8.742503 10.908411 8.997424 10.554651 9.480464 11.342942 10.060193 2.371196 13.501488 3.470732 8.942133 5.332024 8.545405 7.600012 12.395937 -1.436354 14.003702 4.693119 10.341410 10.721817 7.387206 NA 9.233565 9.274645 NA 8.960443 5.947542 NA 2.885770 9.284082 9.664500 10.175785 11.114104 10.086910 10.494206 5.608233 10.590707 14.388573 7.180718 10.541118 11.265578 10.699547 4.291758 7.110733 8.296853 10.388797 -1.436354 10.410896 8.083475 5.305307 3.563841 9.497529 12.030042 10.616406 12.179008 12.420458 8.338625 10.686666 10.425887 10.641989 9.825346 4.371196 10.912290 11.686343 NA 10.203179 8.738764 3.734569 5.421819 10.123693 9.956156 10.580995 9.090337 2.733766 8.441889 11.776487 11.703070 9.303619 9.212196 -0.32383000 0.87740000 0.87740000 -0.00267940 -0.01913400 -0.01840000 0.59056000 0.00481050 -0.02045900 3.65690000 1.60590000 -0.01771300 0.01288700 0.01284100 0.00606160 3.65690000 3.65690000 -0.00018588 -0.00018588 0.62327000 0.00425480 0.02548300 0.04183400 0.02868300 0.02868300 0.03096600 0.03096600 0.03096600 0.03716900 -0.32383000 -0.32383000 -0.00599930 -0.33414000 -0.01413700 -0.03306500 0.58411000 0.58411000 0.00481050 -0.02045900 -0.02045900 -0.01179600 -0.01179600 -0.67657000 0.00000000 0.01205000 0.01205000 0.01205000 0.01284100 0.01284100 0.00606160 -0.61588000 -0.64775000 -0.64775000 -0.00018588 -0.00018588 -0.00018588 -0.65373000 0.00425480 0.02548300 -0.64621000 0.04183400 0.02868300 -0.01338300 0.03096600 0.03096600 0.03716900 0.00032733 0.05091200 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 8.3086721 11.1945603 6.1260808 9.6473176 3.9047538 11.7916045 2.5638415 -1.4363537 9.1506780 8.6618704 NA 7.0800895 3.3711964 9.9953358 9.5645424 2.2642662 8.3887970 9.1922837 10.8871745 11.3814214 9.5271317 7.1785483 10.3788211 1.7337448 8.2900562 10.3480641 4.8306255 NA 10.3513326 3.8117690 11.9982058 11.6253781 7.4737309 10.4541025 8.3468364 9.9372471 1.7337448 0.1487389 NA 6.7487135 9.5875925 9.5910531 10.5938155 5.1487999 8.3585303 8.3086721 10.8431585 5.8584585 9.6697466 -1.4363537 11.2146655 4.5638354 5.6191195 9.7605264 7.5069978 3.0873949 9.7610548 7.8880187 9.2900564 -1.4363537 14.0678812 0.5638415 10.5830814 NA 6.6565950 5.0395727 8.1165072 9.3460175 14.317573 5.494576 9.016080 13.501488 10.453342 11.199330 12.395937 11.240456 11.004458 9.790250 13.265470 11.226729 8.296853 9.746232 1.148804 7.738764 10.805226 10.8303319 6.9561554 8.1986493 9.4556219 7.8022430 10.0526223 6.8721774 7.4945756 11.3429419 7.6486466 0.5638415 4.8676198 7.1368035 10.4148064 9.3128696 7.9095979 9.3927680 11.6819681 4.6082297 11.3103021 10.1757851 10.8506847 9.2450766 11.3406824 9.3237263 10.3517407 7.5238403 -1.4363537 9.0225626 5.5411183 10.4108955 4.6512986 11.1251261 9.4975287 7.0834740 13.6424468 9.7293733 10.1208231 12.5528778 10.2819429 9.3998884 -0.4361585 TCGA-GM-A3NY 72 0 NA 1162 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 2 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 11.1283004 8.7625993 10.5130878 6.5747161 8.7978583 9.8712407 10.5089757 10.0202506 9.4742438 9.6494710 11.3982806 10.0269765 3.6007098 12.6733994 3.8289768 9.1296400 7.9612766 9.2246454 10.9816983 13.3431414 1.2787579 14.6703724 7.3137791 11.0067405 10.4633048 7.0144602 -1.5286564 8.1666572 9.5219576 0.4714476 6.3601711 6.8765697 -0.5286564 4.8637452 8.9018812 9.8223678 10.6912022 12.3489046 10.0824535 10.5622027 12.8443617 11.2783810 13.7328993 7.7233135 10.4622417 11.8962511 10.6309847 5.2658457 0.4714476 7.6186336 12.2095209 NA 10.7425999 3.7933549 5.1438546 3.6808869 10.6550640 12.0868284 10.8084930 12.0341481 13.0914193 8.3433341 10.6902946 10.4165066 10.8666951 9.9925383 1.9308509 11.4569149 10.3180943 -0.5286564 9.9380151 8.3417932 4.7777616 3.4256204 11.2431245 10.2916076 9.8610601 9.5062276 1.9308509 10.2023233 13.6374615 11.8650873 9.7803365 10.4554910 0.3390100 1.1703000 1.1919000 0.0041632 -0.0071326 -0.0090362 -0.0016629 0.0024366 -0.0078863 -0.0013858 -0.0013858 -0.0013858 0.0125160 0.0125160 0.0108420 0.0072622 0.0072622 0.0037465 0.0037465 -0.0033912 0.0081959 0.0165650 0.0227250 0.0227250 0.0227250 0.0310140 0.0310140 0.0310140 0.0171240 0.0379240 -0.6972100 0.0148880 -0.6707600 0.0086135 -0.0090362 -0.0016629 -0.0016629 0.0024366 -0.0078863 -0.0078863 0.0000000 0.0000000 -0.0013858 0.0118180 0.0118180 0.0118180 0.0118180 0.0125160 0.0195030 0.0108420 0.0072622 0.0072622 0.0072622 0.0037465 -0.6819500 -0.6819500 -0.0011300 0.0081959 0.0165650 -0.6759100 0.0227250 0.0227250 0.0094491 0.0310140 0.0310140 0.0171240 0.0088920 -0.6587300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7899714 11.4540658 2.2787877 9.6419796 3.7505315 10.4386550 1.6413611 -1.5286564 8.8626724 7.6211757 -1.5286564 7.2363003 3.6413495 10.3854400 10.0327166 3.6808869 8.5509134 9.1287471 10.6316153 11.6852923 9.4523181 7.7614475 10.9945005 2.6413611 8.7809052 9.4833547 3.2787877 NA 10.3973540 4.0563928 13.1072601 12.2921063 7.9102206 9.6300385 7.9308603 9.9692805 5.2527865 2.4714216 2.3783174 8.8976933 8.5562370 11.9771162 10.7481347 6.4601135 8.8820604 8.1544232 10.5459047 5.8976930 9.2536078 -1.5286564 10.7660494 0.4714476 5.1007843 9.6784308 6.7095939 5.3417937 8.4615327 7.2296523 8.4314307 NA 14.4075605 1.9308509 10.0341482 -0.5286564 9.2137380 6.2979764 8.0731995 8.5707764 12.251547 5.738214 8.895595 12.673399 11.062568 11.193809 13.343141 12.319269 8.706988 9.955748 13.470548 9.180512 7.618634 9.480557 1.641361 7.323177 10.568802 10.910221 4.471428 8.294796 8.134987 7.360172 10.509682 6.661254 9.580606 11.398281 7.422713 2.056375 6.846468 7.319707 10.193809 10.369274 7.226316 10.187819 7.775209 5.671101 13.430807 10.691202 10.876038 10.389546 10.658162 9.270710 10.263405 7.219622 NA 9.912926 6.185674 10.742600 5.775209 10.903971 10.655064 7.983181 13.902143 10.374181 10.943866 12.645808 11.593124 10.177493 2.278788 TCGA-GM-A3XG 46 0 NA 1330 breast stage iiia t3 n1a m0 female 2009 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 3.467973e-08 9.602982 8.547196 10.971405 6.214521 8.687374 8.842652 9.989247 9.617713 10.783384 13.485461 10.842107 10.331036 3.331032 13.477758 1.642979 10.761921 8.344960 8.999554 10.383323 12.068895 2.280422 13.180845 7.444598 10.222547 10.043859 3.517452 NA 7.774551 9.329480 3.379940 8.133051 7.430156 NA 2.996624 9.282823 9.160430 9.783100 10.984560 9.154293 10.260141 10.120063 11.259937 14.885889 6.251920 10.183861 10.259733 10.440281 6.065512 5.890906 8.433057 12.567462 NA 11.063408 5.305945 4.915999 2.996624 9.531723 12.114655 10.651720 12.367967 12.278194 9.242893 10.839923 10.620896 10.506478 10.191160 2.379954 11.311077 10.803412 NA 10.235852 8.649228 4.454676 3.116914 10.927611 9.830057 9.940660 8.677626 6.012213 9.907683 12.584761 13.091268 9.804532 10.225435 0.02806000 0.02806000 0.02806000 0.00069327 0.00069327 -0.00166290 0.00074373 -0.00912860 -0.00912860 0.00027728 0.00027728 -0.00321270 0.00208050 0.00208050 0.00069327 0.00069327 0.00069327 -0.00263220 -0.00263220 0.00000000 -0.00124730 -0.00207840 0.00152550 0.00152550 0.00152550 -0.00387790 -0.00290910 -0.00290910 0.00027728 0.02806000 0.02806000 -0.00033633 0.00069327 -0.00166290 -0.00166290 0.00074373 0.00074373 -0.00912860 -0.00912860 -0.05855300 -0.00207840 -0.00207840 0.00027728 -0.02520900 -0.02520900 -0.02520900 -0.02520900 0.00208050 0.00208050 0.00069327 0.00069327 0.00069327 0.00069327 -0.00263220 -0.01656700 -0.01656700 0.00000000 -0.00124730 -0.00207840 -0.03449500 0.00152550 0.00152550 -0.00332430 -0.00387790 -0.00290910 0.00027728 0.01042400 -0.01216200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.19586233 12.24330575 6.47867903 10.28000712 2.14323013 10.90820413 1.28042188 1.28042188 9.31697589 8.81735081 0.47300757 7.07296756 3.22794127 10.11826290 9.67762593 2.79497724 7.28362643 9.52290338 10.06130098 11.23294299 9.44265721 6.83937766 11.99281392 0.05797007 9.61835008 11.05449084 8.68250834 -1.52699243 10.00492366 5.99661697 13.79874676 12.42943099 8.66781160 10.14371100 7.81290505 9.93606826 5.11690949 2.05800472 -1.52699243 1.64297876 9.69403762 10.67334044 9.46244931 6.29323436 9.80569003 7.85459789 10.52528324 4.94878771 10.09327467 2.05800472 11.37862986 1.93247698 5.36787424 9.41236216 5.99135404 2.37995360 8.87393436 6.65793006 7.67762593 -1.52699243 14.59566041 -0.52699243 11.15626874 NA 8.02187666 6.04291132 7.85675916 8.52969252 11.641913 4.948788 8.741012 13.477758 10.291637 10.602338 12.068895 11.604912 8.890971 9.969909 12.969846 11.479556 8.433057 8.599759 1.280422 7.687374 10.022840 10.746268 6.544518 8.894068 8.857839 6.706674 10.009224 5.767676 7.421422 10.842107 6.662879 1.794977 10.098764 6.151972 11.076217 9.951824 8.597176 10.378066 7.152535 2.932496 12.030758 9.783100 10.500961 10.138391 10.486028 9.152535 10.120513 7.176958 NA 9.357431 6.200975 11.063408 3.379940 11.081772 9.531723 6.489862 15.124947 10.506134 10.681289 12.426797 10.845376 9.485679 1.280422 TCGA-GM-A3XL 49 0 NA 2108 breast stage iia t2 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2.080784e-06 4.855162e-07 8.368787 8.793610 10.845012 7.562187 8.803703 8.950220 7.789102 10.457759 12.693884 12.614168 10.425443 10.066551 2.054397 11.207100 1.469417 10.901450 7.155930 8.065620 5.054393 4.024018 NA 11.285213 8.559542 9.135112 10.541897 6.981183 2.639348 10.892004 10.821197 NA 8.344411 6.583172 -1.530739 5.598714 9.703049 10.188819 8.622982 8.530126 8.976233 11.863356 2.376318 8.244217 14.624703 7.816276 9.085059 9.757719 9.835752 3.791356 -1.530739 8.234302 11.301133 -1.530739 8.169869 5.250791 7.789102 5.928861 7.050630 11.967656 11.577791 10.511089 12.149789 5.726818 10.717950 10.498455 10.774922 9.634337 3.376318 12.066318 7.698248 NA 11.336322 8.687388 3.202778 5.250791 11.796561 9.675223 11.024978 9.509034 NA 7.918578 11.857178 12.241847 9.094225 8.795859 -0.044822 0.854820 0.758150 0.696520 0.355610 0.098387 0.634450 -0.290450 0.182680 -0.517020 -0.517020 0.786590 0.980390 0.228700 -0.101320 0.428560 0.354520 0.267650 0.064654 -0.058032 -0.495800 -0.472830 -0.486800 -0.486130 1.234000 -0.094196 -0.066654 -0.092983 0.143250 -0.645560 -0.044822 0.344530 -0.497980 -0.518050 -0.503260 -0.633200 -0.119650 -0.849390 0.182680 -1.292900 -0.521180 0.297870 -0.517020 0.360190 0.232700 0.232700 0.146460 -0.997850 -0.498190 -0.101320 -0.101320 -0.500580 -0.500580 0.196950 -0.489950 -0.489950 -0.518050 -0.478920 -0.488580 0.050534 -0.486800 0.013911 0.973580 0.420490 -0.092983 -0.838090 -0.020001 -0.184330 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.508 -0.462 -0.262 -0.262 -0.212 0.275 0.111 0.111 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.107 0.233 0.233 0.130 -0.032 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.508 -0.462 -0.262 -0.262 -0.212 0.275 0.111 0.111 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.107 0.233 0.233 0.130 -0.032 7.92064107 11.64123207 2.55689532 6.92886180 3.24447611 10.90692178 2.79135567 -0.53053075 9.54891455 8.41047722 1.63937110 7.30863391 5.83575231 10.67002194 10.03975995 5.00858997 4.89569524 8.98217021 7.00081129 10.07676016 8.91569627 5.77321043 10.16030080 2.16986088 7.17678850 9.98955728 2.46941715 NA 10.49940713 2.92886298 13.04213002 11.97114259 6.17678950 9.79642092 11.19798810 10.87430524 4.71735838 1.92884404 0.05436229 -0.53053075 9.92629748 10.16465808 6.09878588 NA 8.64433040 9.30784584 10.53988618 4.44671279 10.15022887 2.37631817 11.76448122 4.73621520 4.46943018 9.23171224 7.66912671 7.30547994 8.58317192 7.60642076 10.10514795 5.16986890 14.22212404 -0.53053075 11.61568025 NA 8.38231925 2.63934794 7.96728160 8.93805374 10.217992 9.798666 8.131208 11.207100 9.715577 12.137428 4.024018 5.953247 8.937035 10.618859 13.512842 12.591530 8.234302 9.070272 6.619177 8.347481 10.070272 11.132765 2.791356 8.234302 8.058144 4.513825 9.818661 7.745554 4.327414 10.425443 11.510747 -1.530739 7.676444 10.589091 10.701251 11.084830 7.624248 10.932699 6.508349 6.183675 11.126710 8.622982 10.237614 10.541562 9.869776 10.318444 10.569435 7.250789 NA 9.630524 8.556893 8.169869 5.352073 11.565784 7.050630 8.071312 14.184775 10.657400 10.502853 12.706490 12.007497 9.177651 5.327411 TCGA-GM-A3XN 44 0 NA 2019 breast stage iiia t1c n2a m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 2 6 NA NA 3 4 2 3 4 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 3.81477e-07 1.733986e-07 10.20923195 9.22984216 11.51742910 8.16532409 8.59676374 9.37492232 10.51550678 9.61646412 10.73744949 9.62297152 11.29730521 10.09169904 4.05991764 12.54647415 3.09029453 10.72207422 7.27351309 8.67900569 9.17952075 12.50576859 2.96476827 13.63142785 5.53875232 10.01905108 10.21182443 8.07708114 1.09031147 9.24342060 8.64743540 2.59277993 8.57679080 7.26687928 1.09031147 5.29974286 9.07897562 9.76624796 9.92634122 10.70622697 9.49401312 10.92291720 4.77211263 9.70745214 14.73277512 8.40744708 10.27557934 10.81792778 10.47399517 5.71478128 0.09031147 8.49117046 11.95756964 -1.49451552 10.70223780 6.03670992 6.03670992 5.13468506 9.89764582 11.79390612 10.96680780 12.72457256 12.53340712 8.84517827 10.59444778 10.41361217 10.78522914 10.69946965 4.23325153 11.37723364 10.58514649 0.09031147 10.62362063 8.79419457 4.52813995 5.89764461 11.05463179 9.88578940 10.29608418 8.94308033 2.67525139 10.09731819 13.63396720 12.76028316 9.90353770 9.94827188 0.00499690 0.67233000 0.67586000 -0.00857660 -0.00857660 -0.01395300 0.34655000 -0.01862800 -0.37628000 -0.00788630 -0.00788630 -0.00788630 -0.00018746 0.00041593 0.00110930 0.00110930 0.00047180 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00000000 0.01140000 0.01140000 0.01140000 0.01908300 0.01908300 0.01908300 0.00958830 0.00499690 0.00499690 -0.01087400 -0.00857660 -0.01395300 -0.01395300 0.34655000 0.34655000 -0.01862800 -0.36488000 -0.37628000 0.33448000 0.33448000 -0.00788630 0.00110930 0.00110930 0.00110930 0.00110930 0.00041593 0.00041593 0.00110930 0.00110930 0.00047180 0.00047180 -0.04495700 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00000000 -0.34710000 0.01140000 0.01140000 -0.00055444 0.01908300 0.01908300 0.00958830 0.00555290 -0.32147000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 0.000 9.5003888 13.7870773 7.7953475 10.6871018 4.6138558 10.8368052 3.5497185 1.9647683 9.4833238 9.7884167 -1.4945155 7.9977023 5.8362448 9.6651996 9.9383921 3.3126797 9.3191096 9.4152214 9.0959155 10.5707445 9.6356222 7.0483604 12.4189658 2.6752514 8.7918860 10.1961994 5.4001451 NA 10.8507336 4.0288874 13.2475852 12.1705533 8.7269157 9.5193489 9.5639966 9.4783081 4.3879691 2.2057678 -0.4947188 8.5619661 8.7662480 9.8656269 8.7025450 7.1671060 9.1506264 7.1918291 10.3358436 5.5276959 9.3126833 -1.4945155 11.7760617 2.5053320 5.0131228 9.6257218 6.8300487 5.6138528 10.1905152 8.3864424 8.4996817 0.8272500 14.0268061 0.5052812 10.3590278 -1.4945155 8.5483557 5.8091083 7.4566132 8.4754343 12.340858 5.459523 8.394072 12.546474 10.444687 10.430141 12.505769 12.072809 8.996029 10.250162 13.540729 11.817219 8.491170 8.863980 3.312680 7.391024 10.659197 11.288531 6.198816 8.794183 8.688964 7.439019 10.283451 7.494013 8.815941 11.297305 6.430141 3.897647 6.400147 6.662624 11.093340 10.255617 7.776792 9.551770 10.593454 6.306228 12.763558 9.926341 10.599736 10.299338 10.589472 10.711732 10.562982 8.336636 NA 9.634277 7.797650 10.702238 6.914719 11.254003 9.897646 7.296491 14.341699 10.136505 10.566362 12.704694 11.239403 9.880911 2.592780 TCGA-GM-A4E0 67 0 NA 2191 breast stage iiic t3 n3a m0 female 2007 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.427581e-07 10.0926370 9.0780101 10.8369574 7.6577357 8.4093167 9.2126596 9.1166904 9.8831230 10.6292585 8.9617159 10.9059395 10.0799688 2.3617964 12.3026409 2.1394040 10.0015313 6.3873384 9.1469052 8.7442728 11.5140878 0.5544415 12.9864679 5.4370912 10.0868041 8.9273131 3.1394040 NA 11.7592943 7.6524800 4.3093363 7.7041955 7.3999384 NA 4.1394122 8.8305726 9.7455073 9.2857670 10.1792436 9.4416688 10.7231202 5.4613386 10.3849633 15.0841226 6.7197571 9.1109541 9.9765129 10.4186342 5.9294880 NA 8.2652545 11.3022215 NA 11.1557546 6.5656749 6.7736166 4.5086442 10.5459699 11.6646051 10.2635319 10.8718607 12.4089269 8.3456110 10.6225546 10.4590827 10.4643411 10.3553480 3.5544538 11.1974023 8.5544480 1.8763696 10.8831230 8.5988423 4.0780120 6.5202321 10.2729809 9.9911596 10.3068288 9.1673165 4.9807108 9.6205373 13.7859693 13.0551655 9.6232264 9.8317356 0.17860000 0.17860000 0.17860000 0.00388540 0.00388540 -0.00816240 0.00000000 -0.05050600 -0.05050600 0.00944910 0.00944910 -0.00367450 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00930980 0.00016184 0.00016184 0.02468900 0.00944910 0.01684500 -0.05428600 -0.05428600 -0.05428600 0.02272500 0.02272500 0.02397000 0.02679500 -0.23859000 0.17860000 -0.25484000 0.00388540 -0.00816240 -0.00816240 0.00000000 0.00000000 -0.05050600 -0.05050600 -0.05050600 -0.00539920 0.00097064 0.00944910 0.26451000 0.26451000 -0.26384000 0.02974700 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00930980 0.00930980 0.00016184 0.00016184 0.01922300 -0.00522210 0.00944910 0.01684500 -0.25596000 -0.05428600 -0.05428600 0.00736090 0.02272500 0.02397000 0.01118800 -0.27224000 -0.24192000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 0.000 9.5754281 12.3889191 6.0138798 10.7958354 3.4613452 10.6365972 2.5544415 4.9119983 9.0240900 10.1099958 -0.4455585 8.9991110 7.2891576 9.1071171 9.5013543 3.0138731 10.1013425 9.5259917 9.4522936 9.8673311 9.1991877 7.0382639 13.1525006 4.4124293 7.4370912 10.4777756 5.2548888 NA 11.2592163 4.0138821 13.1252525 11.8185974 9.2600805 10.2635319 9.6629725 9.5572630 3.3617964 1.1394040 NA 0.5544415 8.7856692 10.2772557 9.3374462 8.9680761 8.1790243 7.4613386 9.6939995 5.0780120 9.1691579 0.5544415 11.4515372 2.8763696 5.8582297 8.9850262 6.6579458 4.1394122 10.3650197 9.4538050 8.0422881 2.1394040 13.8268592 NA 10.4620899 NA 8.1506379 7.8118358 7.5712566 9.0322064 12.4739949 4.4613386 8.6965552 12.3026409 10.1243037 10.0025644 11.5140878 11.1280953 8.6247300 9.9185827 13.3606956 11.4298135 8.2652545 7.7832667 -0.4455585 7.0858293 10.3698313 11.278109 5.485185 9.013880 8.139411 6.754121 9.692899 8.612440 8.788068 10.905939 7.821234 1.876370 7.835219 5.810137 10.343982 10.746124 7.835219 9.607016 9.348864 5.461339 13.377146 9.285767 10.749820 9.941388 11.061251 10.499160 10.607016 7.571257 NA 9.735451 5.763900 11.155755 5.876377 11.169618 10.545970 6.724373 14.270464 9.674686 10.780258 12.416504 10.647866 9.738083 3.641916 TCGA-GM-A5PV 63 0 NA 412 breast stage iib t2 n1a m0 female 2011 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 9.7430107 9.0024817 11.0960962 6.7628922 9.0213118 9.0268037 10.6602736 9.1365349 10.2526373 10.6574441 10.8879565 10.1889117 1.2498094 13.4406244 2.1242950 9.8050506 6.9502619 8.2960370 9.6081071 13.2780737 0.9868114 14.1178731 6.5777491 10.2294762 10.8954807 5.8347845 NA 9.7863933 9.4503122 0.6648469 7.9957768 6.6132266 NA 2.3653006 9.1385654 9.4122135 10.0235110 11.3853178 9.3032958 10.2689497 12.0066566 11.9860833 13.8786475 5.8375876 10.0052662 10.9363228 10.3765268 3.5228467 4.7092520 7.8044111 11.0614646 NA 10.4109541 6.5657266 4.9316452 4.1567121 10.0268035 11.6042553 10.8158763 11.4592757 12.2160874 8.0636032 10.7010334 10.7041696 11.2184891 9.8966810 2.9127840 11.6738136 11.5438686 1.8347921 10.0393560 8.6676747 3.1884168 4.8347870 10.8813025 9.5313661 9.6000248 9.6414239 3.9867841 9.3399346 12.8949553 12.5591092 9.7336380 9.8253616 -0.00180140 0.11538000 0.15233000 -0.00843850 -0.00843850 -0.01188700 0.12049000 -0.07761100 -0.07761100 -0.51948000 -0.51948000 0.23814000 0.01447000 0.01447000 -0.06740200 -0.06740200 -0.06740200 -0.00857660 -0.00857660 -0.01106000 0.00208050 0.00680440 0.00930980 0.00930980 0.00930980 0.01028500 0.01028500 0.01028500 0.01460900 -0.00180140 -0.00180140 0.00000000 -0.00843850 -0.01384400 -0.01188700 0.12049000 0.12049000 -0.07761100 -0.07761100 -0.07761100 -0.00470790 -0.00470790 -0.51948000 -0.00013862 -0.00013862 -0.00013862 0.00906580 0.01447000 0.01447000 0.01391600 -0.06740200 -0.06740200 -0.06740200 -0.00857660 0.00055459 0.00055459 -0.01106000 0.00208050 0.00680440 -0.63026000 0.00930980 0.00930980 0.00263570 0.01028500 0.01028500 0.01460900 0.00305220 0.02440800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 0.000 8.0355469 11.3377271 6.6248612 9.2460603 4.1567121 10.6471404 0.9868114 1.2498094 8.9020697 8.2040184 0.6648469 6.2721893 3.0571730 10.2969463 9.3328583 -1.3349711 6.3859590 8.6690803 10.0398992 11.6106694 9.4083731 6.5290463 10.0035962 1.7556995 9.6161445 9.9800093 6.6760868 -0.3351531 10.3880940 3.7092575 13.4722147 12.5479803 6.8888613 10.5115255 8.0550286 9.7733842 2.6648696 2.2498094 0.2498700 4.0571730 9.8429022 11.2239979 10.4846398 5.7733845 8.5022829 7.9456305 11.0141410 4.8146068 9.7356516 NA 10.8733990 0.2498700 3.2498245 9.9225776 6.7998502 0.9868114 8.3105183 6.7786015 7.3927802 -0.3351531 14.3031260 1.2498094 10.2740386 NA 8.2629123 4.6421412 8.1942905 9.5762517 12.998511 4.249825 8.972060 13.440624 10.329751 10.701033 13.278074 12.380822 9.097402 10.020211 12.742260 10.625586 7.804411 9.066806 NA 7.733638 10.897580 10.518169 7.103652 9.034457 9.053953 7.340817 10.369148 6.583724 7.799286 10.887956 7.128384 1.472228 6.804411 5.192648 9.339935 10.220408 8.142618 9.310518 9.079545 4.392778 10.892770 10.023511 10.784449 9.952572 11.061732 8.779903 10.138058 7.361827 NA 9.329982 3.522847 10.410954 1.472228 11.109616 10.026804 6.809519 14.432797 10.696906 11.101832 11.633167 10.555884 8.844769 0.249870 TCGA-GM-A5PX 65 0 NA 551 breast stage iib t2 n1mi m0 female 2011 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 3 NA NA 1 4 2 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 9.8623776 8.9629628 10.5452866 5.9112074 9.2746870 8.9708493 9.8780396 9.5331631 10.9399018 8.1201534 11.6507459 9.7986051 1.4517518 13.1607355 2.3448569 10.0297430 7.8068112 8.0852892 10.2577489 12.8492202 0.9663566 13.9292440 6.5270625 10.2349320 9.8434786 5.8342435 NA 9.5942466 7.6833385 1.6444101 8.2256205 6.6500450 NA 3.3993078 9.4159093 9.7051159 10.1277318 11.3810332 9.5986163 9.9758967 4.8538709 10.2851167 13.8692506 5.6323089 10.2972648 10.4777053 10.0633266 4.3168481 4.7737010 7.7659530 10.1635646 NA 10.9714111 6.1201528 5.1201528 4.3723392 9.1835786 11.7345323 10.7678947 11.4765187 12.3368174 9.1728740 10.8672148 10.6152448 10.9315551 9.5905951 0.9663566 11.6165022 10.2289127 NA 10.0722564 8.7051157 2.8931098 2.2293726 10.0161965 9.6044218 9.9234501 8.6983456 3.8538759 9.8237070 12.7192303 13.9267482 9.4914771 9.7941669 -0.00193990 1.03400000 1.03940000 0.00402430 0.00402430 0.00430210 0.00777830 -0.00352180 -0.00352180 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 0.00235810 0.00235810 0.00235810 -0.00429290 -0.00429290 0.00416320 0.00666530 -0.00415460 -0.02000100 -0.02000100 -0.02000100 -0.03817900 -0.00774820 -0.00774820 -0.00083160 -0.01257600 -0.00193990 0.00000000 0.00402430 0.00430210 0.00829610 0.00777830 -0.00207840 0.00555290 -0.00352180 -0.00352180 -0.00556820 0.00346870 0.00000000 -0.00221680 -0.00221680 -0.00221680 -0.00221680 0.00041593 0.00041593 0.00235810 0.00235810 0.00235810 0.00235810 -0.00429290 -0.00429290 -0.00429290 -0.51199000 -0.53581000 -0.00415460 -0.53042000 -0.02000100 -0.02000100 0.00555290 -0.03817900 -0.00774820 -0.00083160 -0.00027724 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8118380 13.1778104 7.3238996 9.8550912 0.9663566 10.6980064 0.2293418 0.2293418 8.9100349 9.5422654 0.9663566 7.7941669 4.8732374 10.2293823 9.7332081 1.2294033 8.2498994 9.0956309 10.6521480 10.5159401 9.3393087 6.1601195 11.9442003 2.3448569 8.7265690 9.6826530 4.3448569 NA 10.3159609 3.3993078 13.3692534 12.0012844 9.2683013 10.6249165 9.0706845 9.7979719 2.6444101 0.6444101 NA 4.0706813 9.5354441 10.7695104 10.5982525 6.6102040 7.5595522 7.3892536 10.7691874 5.6556466 9.7003801 NA 10.4863772 2.2293726 5.3168445 9.8147268 6.4811649 3.8143453 9.4315062 7.9088627 6.2368772 -1.3554976 14.1997579 -1.3554976 10.4753312 NA 8.9263500 5.7105089 8.1140619 9.4175591 11.507845 4.527064 8.759463 13.160735 10.203797 11.259360 12.849220 10.927219 8.875641 9.804922 13.286641 9.974216 7.765953 9.610204 NA 8.183579 10.738168 10.462203 6.199009 8.872036 8.645828 6.863588 9.376621 6.458202 7.032437 11.650746 8.738498 4.688813 6.844092 5.067325 9.938466 10.202362 7.621700 9.114062 7.041025 4.892347 11.634607 10.127732 10.092020 9.719230 10.614166 9.259130 9.656346 7.023799 NA 9.275142 4.399308 10.971411 6.715882 10.607316 9.183579 6.993148 14.610317 10.637358 11.045299 12.022579 10.854178 9.200926 2.229373 TCGA-HN-A2NL 56 0 NA 79 breast stage iia t2 n0 m0 female NA NA NA infiltrating lobular carcinoma 0 NA NA NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 4.508365e-07 10.387318 8.341089 11.803685 8.713058 9.744334 6.958024 6.961971 10.381804 8.506967 10.997739 11.493395 10.261654 2.146720 9.329678 3.253626 9.339572 9.002777 7.983489 12.256340 7.536383 NA 6.180981 6.160517 10.961340 10.112939 3.533738 1.031254 11.319375 11.310650 2.616193 6.328914 7.325854 -1.553850 4.713058 9.537045 9.270434 9.345628 8.654505 9.778867 10.115599 1.768206 11.952454 13.348316 8.232655 10.298765 11.124651 10.153198 5.201159 NA 8.079266 10.658463 NA 9.990752 4.174191 5.703660 4.905702 9.470718 12.637407 10.318946 11.702332 12.226913 6.146710 10.306582 10.593272 10.536052 11.148011 4.768200 11.590292 9.946615 -1.553850 10.307358 9.693605 8.124220 3.575554 8.972770 11.408986 11.892708 8.746623 NA 3.575554 12.347421 10.883503 10.818320 10.780544 0.17513 0.19695 0.20870 -0.61614 0.20549 -0.59828 -0.66864 0.21407 0.27237 0.15293 0.15293 0.12800 -0.56939 -0.43366 0.21960 0.21960 0.21960 1.02620 0.16685 0.93961 -0.59234 -0.61992 0.18950 -0.61786 0.88356 0.16911 0.16911 -0.64640 0.20152 0.17513 0.18968 -0.54724 -0.61614 0.21484 -0.59146 -0.60757 -0.60167 0.21407 0.27237 -0.54340 0.16400 0.19266 0.82118 -0.60738 -0.60738 0.26388 -0.65193 -0.43366 -0.27703 0.21960 0.21960 0.00000 0.00000 0.24575 0.16685 0.75754 -1.29290 -0.60583 -0.60535 -0.65845 0.18950 -0.61786 -0.61475 0.16911 -0.64640 -0.65062 -0.61422 -0.64537 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 -0.235 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 -0.235 8.41925066 12.32317146 2.14672038 10.20699089 4.55395638 12.70763127 3.93812580 0.44625623 10.63207550 9.31586462 4.00085635 9.39828409 10.00181871 10.21155702 9.79333848 5.62617919 7.13626933 9.84126933 8.71890065 10.84928288 9.95120908 6.44062503 10.05452577 1.03125403 9.35616406 9.22763062 1.03125403 NA 9.69893624 9.28783518 14.17597128 12.72101301 6.38878537 9.80547143 11.11116254 9.76255246 5.93812344 2.44628270 0.44625623 4.71305790 9.76085415 10.44168473 7.30425183 9.96394021 5.76783751 7.71305721 10.87174910 5.17419067 11.56731865 -1.55384966 11.11404773 2.35315388 7.28547435 10.37946360 7.10615985 6.68467569 8.11869611 8.22926922 9.24636177 3.87253330 14.87453290 0.03125403 11.18457432 2.69418932 9.89387076 7.28862157 8.37848561 7.99701742 7.586998 9.275994 7.855662 9.329678 11.142178 11.262054 7.536383 11.092154 10.166601 11.655724 12.135286 12.541173 8.079266 8.931094 7.046183 9.131896 10.401558 10.070609 5.479693 8.197815 11.294307 9.149309 9.328257 6.965907 5.423551 11.493395 10.209068 4.838589 10.825108 9.724139 12.314418 10.877507 8.363643 10.624002 5.930087 7.240686 10.167494 9.345628 9.947113 11.252821 6.167370 11.088323 10.384748 7.650842 -1.553850 9.327943 7.915913 9.990752 7.653285 10.636095 9.470718 7.406794 15.492116 10.960492 11.272819 11.759863 12.552588 9.115156 3.400470 TCGA-HN-A2OB 45 1 1900 1883 breast stage iib t2 n1 m0 female NA NA yes infiltrating lobular carcinoma 2 NA NA NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 3.467973e-08 10.2588837 9.6733918 11.8021299 8.9774139 8.3246014 9.0672216 10.5845131 9.6582179 10.6420712 10.5747637 11.5141766 10.2477226 1.8468343 13.8173536 3.9343089 9.9851150 6.5610893 8.5628053 9.4969973 12.6305577 4.5192714 12.8902978 5.9129324 9.2188594 10.4033492 4.5747615 NA 8.3762739 8.3124097 2.4318101 8.9683768 7.9709646 0.4317834 5.0947723 9.7225926 10.1065865 9.2466551 11.6308645 10.1159699 11.2662768 12.3520345 11.2372809 15.0457486 8.1910059 10.3999925 10.9136051 11.1127512 5.7775802 3.0947766 9.0623762 12.1834892 -1.1532861 11.3679528 5.6282020 5.3225772 5.6670235 10.1083505 11.8450810 10.6008956 12.7852283 12.6598227 8.5350934 10.8510637 10.6680990 11.1554667 11.2115251 5.0366660 12.0010284 12.0946224 -1.1532861 10.4789297 8.8926029 4.6213662 5.4615515 10.3738314 10.1738344 10.3072991 9.3615572 4.9965921 10.2877124 13.7735098 13.2365418 10.0774641 9.9831936 0.2045700 0.2045700 0.2045700 -0.0018014 -0.0058095 -0.0043777 0.1206400 -0.0020784 -0.0020784 1.1275000 0.0093098 0.0093098 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.0034627 0.0026357 0.0026357 0.0130740 0.0130740 0.0130740 0.0126550 0.0126550 0.0126550 0.0127950 0.2045700 0.2045700 0.0065262 -0.0058095 -0.0043777 -0.0031859 0.1206400 -0.0030950 -0.0020784 -0.0020784 -0.0020784 0.0000000 0.0000000 -0.1695500 0.0049969 0.0049969 0.0049969 0.0049969 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.4623800 -0.0034627 0.0026357 0.0026357 -0.4431200 -0.4206800 0.0130740 0.0061090 0.0126550 0.0126550 0.0127950 0.0062481 0.0234260 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 0.000 9.1218036 14.1573850 8.1042313 11.3101121 3.7537329 11.0912071 2.8468343 1.6542064 8.6525872 10.1850225 -0.1531256 9.2142579 4.0167726 9.5228002 9.4166987 2.0167816 9.2928926 9.4467560 10.8709440 10.7458225 9.6052163 7.6828935 11.1639731 2.6542064 9.3860019 10.4033492 7.5263232 NA 10.9004298 4.0947681 12.8245703 12.0397524 8.1710236 9.9857549 7.1229677 9.2562342 5.7172076 1.4317834 1.1687704 3.6541949 9.0428306 9.7589840 9.6412592 6.5610893 8.6684259 6.7233606 9.6598227 6.4762002 9.5201523 -0.1531256 11.7891744 4.6797334 7.1414645 9.5118149 5.8733112 4.6282020 9.1698980 7.9940479 7.2562342 NA 13.7567832 0.8468744 10.3072991 NA 8.3684436 6.7355858 7.7172082 8.9369556 12.4660315 3.7537329 8.7981280 13.8173536 10.2375496 10.1749571 12.6305577 12.2167132 8.9356315 10.5148418 12.9433113 11.4698101 9.0623762 8.0804631 0.4317834 7.1414645 10.6781504 11.800676 6.526324 8.512179 8.439300 7.046515 10.519176 6.759732 6.896692 11.514177 7.374321 2.934309 8.152905 4.724830 12.367462 10.359090 8.496100 8.896692 11.794845 5.588310 11.730706 9.246655 10.350172 10.044674 10.937617 10.697030 10.529838 8.846843 NA 9.777144 6.416700 11.367953 7.673392 11.177942 10.108351 7.213165 14.265651 9.802493 10.291341 12.633215 11.451165 9.839782 3.239154 TCGA-JL-A3YW NA 0 NA 360 breast stage iib t2 n1 m0 female 2011 NA no infiltrating lobular carcinoma 3 asian not hispanic or latino NA NA 2 5 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.976745e-06 5.548757e-07 9.7606122 8.6893837 10.7367504 8.7315634 8.1852040 9.4985359 9.2968302 10.2532106 11.6843394 12.7720251 10.3950433 10.0113118 0.1119661 12.8600779 3.9532559 11.9004014 3.8845491 8.6131286 6.8933149 10.5396169 NA 9.7896746 7.3724829 9.5582939 10.2287321 5.0968480 2.3343394 12.7803103 10.4529177 2.5269952 9.1798375 8.0603220 1.3343394 5.7364452 9.9353221 9.9198464 9.0337957 9.6805445 9.4978173 10.1540702 3.1708544 8.4518050 15.4278003 7.4129331 9.5562796 9.9600562 9.7677837 4.1417025 4.7168153 7.9469525 10.7100074 -1.4731299 10.4271045 5.7937789 7.2343519 6.5713871 8.8319140 11.2760238 10.6141237 12.2480916 13.3912270 8.7879120 10.1887706 9.6690994 11.0666360 10.6604558 3.5713856 10.5241719 9.7019181 0.1119661 10.9973971 8.9395622 3.1714310 6.0188456 9.6342095 10.0544695 10.2113027 8.8601478 3.2818763 6.8712880 13.5393114 12.9514868 9.9458991 9.6799111 0.1204500 0.1204500 0.3403600 0.0356650 -0.1896100 -0.0788100 -0.1119500 -0.0515860 -0.0515860 -0.4887900 -0.4887900 0.2276200 0.3369100 -0.2173800 -0.0194520 -0.0194520 -0.0194520 0.0000000 0.0000000 0.3225300 -0.0866510 0.0139110 -0.1595000 0.5725500 -0.1316000 0.0093098 0.2240700 0.0942010 0.5117600 -0.0437370 0.1204500 -0.0142280 0.0599370 -0.2167600 -0.0788100 -0.1570700 -0.1570700 -0.2358200 -0.0515860 -0.4153100 0.0499660 0.1984700 -0.4887900 -0.0847190 -0.0847190 -0.0847190 0.0061090 0.5142000 -0.2142900 0.0360880 -0.0194520 0.2091600 0.2091600 0.0000000 -0.1953700 -0.1953700 0.5341500 -0.0919490 0.0139110 0.0101460 -0.2095800 -0.1316000 -0.3594300 0.0093098 0.1401300 -0.0087146 0.0620560 -0.2000000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 0.000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 0.000 9.1034767 15.4191795 4.6767413 9.9579675 4.0274726 10.7506925 2.2274330 5.7937789 9.8135502 9.3669835 NA 8.7749198 7.3693426 10.5224063 9.8751672 2.9193019 8.1834175 8.5269925 9.0397328 9.7749200 9.0900266 6.9657843 11.5717280 2.6144507 7.8444051 10.4931373 2.5269952 -1.4731299 11.0719569 0.8489584 13.1172871 12.8207514 7.9342599 9.6843394 9.8347624 9.9014886 6.4338825 3.2818763 -1.4731299 5.6459322 8.7400968 10.2269985 8.5521319 4.8123955 10.1364252 8.7180516 9.7624085 5.9106967 9.1843108 NA 10.2326248 5.1994172 3.3849754 9.3368892 6.3893190 6.4035097 10.2570380 9.0258416 7.9945978 10.2756046 13.8616149 1.1119661 11.0911419 0.1119661 9.6355168 5.4927761 8.2480917 8.8296314 11.792934 8.283549 8.286881 12.860078 10.402358 11.191217 10.539617 9.770166 8.356255 10.323438 13.243115 10.999176 7.946952 9.852298 1.111966 8.318155 10.930004 11.159079 4.334347 9.836469 8.106309 8.605437 9.370191 8.104421 7.134323 10.395043 10.181628 -1.473130 7.418776 8.847477 11.292900 10.817011 7.207739 9.981292 8.119450 7.018846 10.584229 9.033796 10.463998 9.512834 9.941149 10.646258 10.057399 8.358300 6.170848 10.234925 7.518514 10.427105 8.303426 11.056667 8.831914 7.557660 13.685129 10.504988 10.764800 12.663503 11.310605 9.486270 2.227433 TCGA-JL-A3YX NA 0 NA 352 breast stage iia t2 n0 m0 female 2011 NA no infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 5 3 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7.629541e-07 1.733986e-07 10.0675521 8.8919954 11.3691019 8.0076171 8.7235978 8.2292654 10.4462240 9.2292654 10.6308406 12.8718108 11.3150633 10.0270173 3.8324749 12.8700215 2.4788424 9.5615780 6.4937882 8.0704639 8.2558189 12.5916390 7.1098129 14.4143914 4.5568402 10.3480509 11.0894523 3.8938767 1.7683326 9.0646264 10.9626533 2.8324647 8.2732534 6.0902712 -0.1060942 3.6664612 9.2374308 9.7288727 9.8480714 10.9622055 9.4246066 10.5847461 3.1162649 11.5973461 14.4223292 7.8964838 10.6809614 10.6183889 10.0845229 4.9382670 2.8938670 7.7161802 10.1703873 -1.6910567 10.0482712 5.0368330 3.8007653 4.1162649 10.5256584 11.9340506 10.8959868 10.8354118 11.6974681 8.2790185 10.7336037 10.2790724 9.9391797 10.3253727 4.0093561 10.7132558 11.2201173 -0.1060942 10.2790184 9.4535709 4.7039755 3.3533092 11.8366339 10.3236305 10.5940258 9.3312804 1.8938670 9.5686558 12.7224744 12.6144756 9.8519444 9.0136808 0.6633900 1.0728000 0.3885800 -0.3457700 -0.3586200 -0.3611700 0.0377310 0.0273060 0.0070323 0.7248300 0.7248300 0.7248300 0.0134420 -0.3377200 0.0000000 0.0024467 0.0024467 0.0119070 0.0099683 0.7011300 -0.3454200 0.0353320 0.0322300 0.0322300 0.0322300 -0.0471730 -0.0471730 -0.0471730 -0.3364500 -0.3325300 -0.3510300 -0.7167800 -0.3457700 -0.3611700 -0.3696000 0.0212730 0.0212730 0.0273060 0.0070323 0.0053636 0.0080064 0.0149780 -0.7274100 -0.1239900 -0.1239900 -0.1239900 -0.1239900 -0.3377200 -0.3377200 0.0146980 0.0024467 0.0024467 0.0024467 0.0119070 0.0099683 0.0099683 0.7125800 -0.3454200 -0.3410600 -0.6864600 0.0322300 0.0322300 0.0242170 -0.0471730 -0.0471730 -0.3364500 -0.3414000 -0.7109900 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 -0.333 0.056 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 -0.121 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 -0.333 0.056 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 -0.121 7.8265822 12.6983422 7.3910614 9.6537632 0.4659222 10.7230692 3.0093472 NA 9.3910616 8.7299256 0.3089433 7.1226934 4.7351755 9.9554713 9.8620619 5.3750012 7.3060918 8.5497038 9.3402692 11.7818572 9.4332084 6.4888219 10.7767728 -0.2850731 9.2120413 9.5891034 4.9236246 -1.6910567 10.6229293 2.8324647 13.2362276 12.3534774 7.0902723 9.4968831 6.6263252 9.9032372 5.3312789 1.1162982 -1.6910567 8.3464597 9.8901132 10.2858346 9.4750756 4.3750047 9.2702900 7.9162431 10.9437236 5.1792762 9.4968831 -1.6910567 10.0364076 2.8324647 3.8324749 9.7809078 7.0594851 3.3533092 9.5153164 6.9051017 9.5091982 2.3963787 14.1072072 -1.6910567 10.3120790 0.3089433 8.6420679 4.5568402 7.7662937 9.1410115 13.059658 6.438196 8.361481 12.870021 10.603246 11.327982 12.591639 11.940203 9.644861 10.201835 13.071865 12.374329 7.716180 8.603533 5.154401 7.766294 10.527476 11.3701150 6.3641942 8.9590668 9.6465344 9.0919108 10.4223715 5.5756996 7.1915557 11.3150633 7.0804018 0.6308714 6.0231577 7.1444574 11.2449983 10.1354610 9.1606616 10.1919376 10.0300117 4.0093561 12.1162403 9.8480714 10.4557994 10.5721818 11.3076793 10.5183660 10.6590230 8.2572799 3.3089142 9.9852003 4.4586576 10.0482712 5.9088249 10.9512102 10.5256584 6.9884632 14.0814076 10.4307698 10.4589771 12.7952448 11.3053861 9.5473174 0.3089433 TCGA-LD-A66U 44 0 NA 646 breast stage iib t2 n1mi mx female 2012 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 3 NA NA 1 4 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.057880 8.499040 11.027140 5.821565 8.881223 8.740507 9.671948 9.296547 10.500532 12.165773 12.096518 9.969023 2.168129 13.269278 1.753091 10.323363 7.364520 7.969023 8.958200 12.487136 4.849949 13.776185 7.071000 10.560208 10.056359 8.785284 NA 12.561358 9.128125 1.753091 8.716303 6.145402 NA 3.831087 8.902832 9.243156 9.832866 9.992021 8.537357 9.635049 10.068486 11.293536 14.026266 6.749725 10.593685 9.938511 9.524208 5.090955 4.009428 7.571845 10.598575 NA 10.667304 6.966864 5.659976 4.390516 8.567579 11.994142 11.302121 12.154320 12.081137 9.428650 10.308100 10.212061 10.379200 9.716945 2.168129 11.034629 11.199020 -1.416962 10.227016 8.207042 3.910493 3.905091 10.790175 9.089964 9.946748 8.262640 3.490057 9.331353 13.376357 12.617787 9.622765 10.193724 -0.00774820 0.93650000 0.93650000 -0.00899060 -0.00899060 0.00124810 0.37168000 -0.00788630 -0.31587000 0.00750000 0.00750000 0.00124810 -0.00083160 -0.00083160 0.00597000 0.00597000 0.00597000 0.55726000 0.54971000 -0.31677000 -0.00470790 -0.01050800 -0.00968060 -0.00968060 -0.00968060 0.00097064 0.00097064 0.00097064 0.31097000 -0.00774820 -0.00774820 0.00666530 -0.00899060 0.00124810 0.00000000 0.32807000 0.32807000 -0.00788630 -0.31587000 -0.31587000 0.00569190 0.00736090 0.00750000 -0.00747200 -0.00747200 -0.00512270 -0.00512270 -0.00083160 -0.00083160 0.00597000 0.00597000 -0.30240000 0.02216400 0.55726000 0.54971000 -0.18961000 -0.30942000 -0.00470790 -0.01050800 -0.49099000 -0.00968060 -0.00968060 -0.00166290 0.00097064 0.00097064 0.31097000 -0.01675200 -0.49078000 0.000 0.000 0.000 0.000 0.360 0.360 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.360 0.360 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7430315 13.6195485 9.4542954 10.5260412 4.5373582 10.8086690 4.7729836 0.5831339 9.5718450 8.0849975 0.1681285 7.3313532 4.4658047 9.9819040 9.7723670 4.1067252 8.2306185 8.6397980 9.9786944 11.9914900 9.4674910 6.3775767 9.7618251 1.7530910 8.7754529 10.0441280 5.8215648 NA 10.8343468 2.9754835 13.2478853 11.9982418 7.2870641 9.3347044 8.7717493 10.0770157 3.2835959 2.5831580 0.1681285 8.1145419 10.2467184 11.1648316 9.4953010 4.5604398 7.7813354 8.6825080 10.2870638 5.4033393 9.7386110 -0.4167698 10.8514098 1.7530910 4.4900502 9.4866882 7.1072704 5.4779784 10.0674797 7.9925509 9.3791999 NA 14.9226450 0.9051198 10.7319546 NA 7.7779174 6.3246270 7.3775758 9.3546496 12.927532 4.811980 8.214337 13.269278 9.982438 10.951121 12.487136 11.363700 9.206475 10.176551 13.707322 11.544791 7.571845 9.604834 3.042592 7.507973 9.745552 10.565797 6.670624 8.999958 8.473424 7.205212 9.864406 8.192339 8.797479 12.096518 7.425510 1.168129 8.357947 6.930206 9.438029 10.035401 7.931889 10.111126 6.949482 6.422364 12.690949 9.832866 10.794744 10.109170 9.877207 9.468094 10.047706 6.560440 NA 9.506963 7.223405 10.667304 5.525674 10.646218 8.567579 7.133907 14.696210 10.531892 9.576806 12.287280 11.263300 9.050766 1.905081 TCGA-LD-A74U 79 0 NA 402 breast stage iiic t3 n3a m0 female 2013 NA no other specify 11 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6238235 9.5063526 11.7500080 8.9459012 8.0967083 9.2861199 11.3364530 9.7065763 10.5635595 11.3980340 10.7676975 10.3247805 2.6155811 12.3771330 2.0306186 10.8070523 7.0351202 8.8119789 9.3722493 12.5166497 0.7086728 13.2087238 6.4021781 9.6937432 10.5775137 4.8379735 -0.2912389 11.9416441 10.0061806 2.5160404 8.0033121 6.9894615 -1.2912389 4.8379735 10.1788416 9.8211306 9.0272340 11.9583972 10.0678916 11.3414592 6.1349561 11.1947719 15.1733167 9.3375376 11.1739974 10.6563281 10.3086040 5.1516356 3.1681285 8.6379496 12.1604174 NA 11.0983225 6.1599016 6.7199186 6.3525467 9.8507982 11.8286049 10.5790559 12.4946544 12.8765797 7.8172158 10.2861199 10.2950619 10.6215805 11.3011482 4.9375092 11.7963197 10.6820297 0.2936059 10.5204672 8.7921705 4.4393306 6.0574199 10.4043545 9.6636145 9.9830693 9.2164857 4.0306186 9.8418334 13.6615689 12.4528943 10.0739200 9.7680356 0.12384000 0.12384000 0.12384000 0.00038006 0.00038006 -0.00695520 0.05220400 -0.00584970 -0.00584970 -0.00225270 -0.00225270 -0.00225270 -0.00211420 -0.00211420 -0.00072888 -0.00072888 -0.00072888 0.02381000 0.02381000 -0.27419000 0.00246100 -0.08708300 -0.27503000 -0.28064000 -0.28064000 0.02928900 0.02928900 0.02928900 0.01652900 0.12384000 0.12384000 0.00232220 0.00038006 -0.00695520 -0.00695520 0.05220400 0.05220400 -0.00584970 -0.00584970 -0.00584970 0.05206200 0.04796000 -0.00225270 0.00232220 0.00232220 0.00232220 0.00232220 -0.00211420 -0.00211420 -0.00072888 -0.00072888 -0.00072888 -0.00072888 0.02381000 -0.27395000 -0.27395000 -0.27419000 0.00440510 -0.08708300 -0.28516000 -0.27503000 -0.28064000 -0.29145000 0.02928900 0.02928900 0.01652900 0.05149300 0.01443300 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1254886 13.6817606 5.7530857 10.5852081 4.1010113 11.2157425 2.7961616 -0.2912389 9.0215741 8.8185218 -1.2912389 7.8741760 4.4635767 9.3695784 10.0266689 4.2936500 10.3334866 9.6497387 11.1451425 9.8060649 9.7046986 8.1454028 11.0493758 2.7059779 9.1722155 10.4568840 4.4091329 -0.2912389 10.8600249 4.7086894 13.1160917 12.2771223 8.5541813 9.9801541 9.5304651 9.3704692 5.6973763 1.7086728 -0.2912389 5.8276311 8.4900510 9.8514364 10.2637596 7.0706351 9.1160970 7.7282818 9.8904646 4.8379735 9.1127681 0.2936059 12.1627333 3.7961513 5.2322540 9.4719865 5.6659100 4.1010113 9.9713733 9.8379741 6.9375104 2.4091193 13.9002131 2.0306186 10.6050236 NA 7.0750138 6.1265434 7.7310590 8.6902585 12.336098 5.697376 8.261360 12.377133 10.101009 10.557705 12.516650 12.097247 9.176011 10.346674 12.983652 10.126016 8.637950 8.785507 1.030619 7.026104 10.661432 11.3637746 5.9566189 8.5898051 8.4998539 7.5224725 10.6660617 7.1433189 8.6275543 10.7676975 7.1052957 -1.2912389 7.0261040 7.7326118 11.1632475 10.6831058 7.9302784 9.3934398 10.6827472 5.1516356 12.2706771 9.0272340 10.4781158 10.0607346 10.8057357 10.7865082 10.6035089 8.8520744 8.5272733 9.9536674 5.7086921 11.0983225 6.8985155 11.2288727 9.8507982 7.4770078 14.3607238 10.2680682 10.6679687 12.4981229 10.7615988 10.0557588 -0.2912389 TCGA-LD-A7W5 52 0 NA 216 breast stage iiic t2 n3a m0 female 2013 NA no infiltrating ductal carcinoma 23 black or african american not hispanic or latino NA NA 4 4 NA NA 3 4 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1590075 8.8039312 11.9127857 8.4182608 8.1517066 8.9067749 11.2356252 10.4179229 10.5814095 13.9008903 10.6566926 10.5982166 1.9438838 12.2867870 2.2657969 9.3757248 6.4622045 8.7447787 11.2028375 12.6598409 -1.6411537 13.3133400 3.9135022 10.1307690 10.0471667 5.1662696 -0.6411537 10.3648918 10.2541131 3.4463753 9.4046760 6.3757241 1.5288213 5.0593553 9.6151251 9.6683927 7.6830971 10.2369674 10.0628200 10.6130593 10.8096122 12.2288958 14.6731989 9.9139801 10.9912233 10.2172861 10.2977609 5.7767699 5.4357319 8.3145665 10.5168949 -1.6411537 10.0654125 5.8101269 7.1918064 4.3131152 9.2970258 12.0842827 10.1365827 12.0087340 12.8030902 8.2491808 10.9572016 10.6406987 10.6207175 11.1951641 4.8346505 12.1107743 12.0386165 0.3589588 10.4158928 9.5406899 4.5984664 5.4141998 11.0146708 10.4631876 9.8447458 9.4523339 2.8183393 6.1138047 12.6619837 13.0460187 10.4350640 10.5228805 0.139840 0.139840 0.139840 -0.163570 -0.286910 -0.070804 -0.051721 0.144100 0.139070 -0.267330 0.229310 0.651030 0.287390 3.656900 -0.123940 -0.123940 -0.123940 0.136720 0.395900 0.179660 -0.203860 -0.022332 -0.277860 -0.262400 3.650600 0.000000 0.000000 0.000000 0.137170 0.139840 0.139840 0.090575 -0.175650 -0.070804 -0.070804 -0.067592 -0.077433 0.148310 0.145780 0.139070 0.117270 -0.026541 -0.283110 -0.299220 -0.209080 -0.020412 -0.020412 -0.282990 -0.062495 -0.287030 -0.123940 -0.071739 -0.071739 0.136720 -0.292720 -0.292720 -0.286910 -0.279060 -0.022332 0.146780 -0.729410 -0.262400 0.218520 0.000000 0.000000 0.137170 -0.294730 0.108180 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.273 -0.273 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 -0.113 -0.113 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 0.000 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.273 -0.273 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 -0.113 -0.113 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 0.000 10.4830378 13.4008750 5.3812834 10.6864691 7.5561328 12.3130219 7.5187877 0.6808644 9.0454170 7.5462686 -1.6411537 9.4483670 4.3812834 10.2071482 9.9690185 1.9438838 9.7788766 9.9782194 9.4785061 9.7799293 9.6243616 7.2537340 11.2975771 2.9438838 8.4648251 10.3429788 6.6718000 NA 11.2578956 4.1402797 13.0910839 12.1552603 8.1304058 10.1814872 10.1674785 9.6327121 7.2537340 3.1662655 -1.6411537 5.6068449 10.1742998 10.0335501 9.0731620 5.2168972 10.4304526 10.0211398 10.5853287 5.3923380 9.3560958 -0.6411537 12.0580551 4.9882711 5.1402756 9.6557810 7.0925415 7.9096633 10.1254454 8.4843299 9.4121635 -0.6411537 13.8616550 2.5288463 11.3083785 NA 8.5475054 5.8346505 7.9325638 8.2137847 12.152758 5.635040 8.393715 12.286787 11.010865 9.891272 12.659841 12.119325 9.127101 10.663553 12.893219 10.992139 8.314566 8.803931 3.446375 9.670097 10.834903 11.63271204 6.62101153 8.92782269 9.08598598 7.30143126 11.12528179 9.15576719 10.14967219 10.65669255 8.30289614 4.40330863 8.28224379 8.31418850 9.93114289 11.56532037 7.55120914 9.64547417 8.84474562 8.34333498 11.91989046 7.68309708 10.44173079 10.40091774 10.40672203 10.06929240 10.78518123 8.35750670 -0.05619117 10.39809936 8.85776551 10.06541250 5.66269828 12.23170867 9.29702584 7.67653259 14.17129433 10.28372897 10.20753943 12.28641666 11.68492452 10.13822546 3.26581192 TCGA-LD-A7W6 54 0 NA 404 breast stage iib t2 n1a m0 female 2013 NA no other specify 2 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2746820 9.4644643 11.9065386 9.1777838 8.3654795 9.3158861 10.9742076 9.4949987 9.9657843 11.6903793 12.5050662 10.4383850 3.4029950 13.1316461 3.7249231 9.5491108 7.0509685 8.3802766 10.1507102 13.0613357 2.4029950 14.2794863 7.5556436 9.9339157 10.5671854 8.1673946 0.5955991 9.5878720 9.2011214 0.9175463 8.1073944 7.2103518 2.0550568 5.2249972 10.0023783 9.8589110 10.9515434 11.3519896 9.4473907 10.9217904 10.8647685 11.9275384 14.2381730 8.6261022 10.5285947 11.4397591 10.8778615 5.3505291 2.2960756 8.7542515 11.4658139 -0.4043054 10.5156224 5.9793463 6.0468533 4.5025343 10.4571164 12.1748399 10.5617867 12.3490675 12.8698743 8.2556376 10.7152315 10.9840062 11.4140242 11.4845753 5.0713765 11.5788135 11.7668186 0.1806571 10.1511896 9.0663007 4.8271534 4.8435668 10.7165276 10.3090284 10.4426992 9.4094230 3.1806094 8.8624285 13.6049456 12.4993354 10.1650228 9.9933164 -0.00498440 0.51839000 0.51839000 0.00374650 0.00374650 0.00624810 0.01223700 -0.00152430 -0.52512000 1.31800000 1.07930000 0.00597000 0.00013863 0.00013863 0.01419000 1.45700000 0.00944910 -0.00643440 -0.00643440 0.01084200 0.00000000 -0.00456950 -0.01986300 -0.01986300 -0.01986300 2.07270000 -0.03435900 -0.03435900 -0.00678130 -0.00498440 -0.00498440 -0.00138580 0.00374650 0.00624810 0.00624810 0.01223700 0.01223700 -0.00152430 -0.52512000 -0.52512000 0.00541390 0.00124810 -0.52174000 -0.00235530 -0.00235530 -0.00235530 -0.02832600 0.00013863 0.00013863 0.01419000 0.01419000 -0.50256000 -0.50256000 -0.00643440 -0.00643440 -0.00643440 0.01084200 0.00000000 -0.00456950 -0.58892000 -0.01986300 -0.01986300 0.01181800 -0.06262900 -0.03435900 -0.00678130 -0.00193990 -0.50588000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 8.9276784 12.5605241 6.5498386 10.4190091 4.0292673 11.0367704 2.9175654 -0.4043054 8.8647684 9.0385854 0.1806571 8.6767124 5.2538532 9.7358325 11.2713783 4.8624266 9.1511896 9.4667770 10.3320437 10.1612200 9.8866398 7.9685067 10.7771047 2.0550568 9.9531938 9.7300681 4.1806014 NA 10.7067774 4.1806014 12.4488539 11.8694374 7.7223465 10.0698548 10.7220237 9.2448980 4.8810430 0.5955991 -0.4043054 2.8435618 11.0809680 9.8358369 10.3839523 6.4536229 8.1781036 7.1918311 10.3908698 6.1880982 9.8647685 -0.4043054 13.4407888 3.4029950 5.3235610 9.3344771 6.5115803 6.0050316 10.1654975 8.2698341 8.0550736 NA 13.6229863 0.5955991 10.2117311 -1.4043054 8.1635979 6.0468533 7.5814838 9.0029095 14.755708 3.843572 8.419009 13.131646 10.533751 10.419805 13.061336 12.582373 9.378935 10.633144 12.989032 11.919822 8.754252 8.976103 2.595647 7.648210 10.907958 11.0087408 6.8050951 8.5942324 9.2707167 8.5352209 10.6705626 7.2645270 8.3047255 12.5050662 6.1578845 0.5955991 10.1396402 7.5947680 9.8494892 10.0134944 8.7171753 9.0509691 11.8169268 6.7093844 12.5223668 10.9515434 10.7434827 10.2654128 10.8035713 10.2277282 10.8758326 8.2431002 1.1805935 9.1290787 7.0134946 10.5156224 6.4094232 11.1091720 10.4571164 7.1730705 13.9040157 10.1876316 9.8268630 12.4355345 10.7621187 10.3175954 2.5956469 TCGA-LD-A9QF 73 0 NA 323 breast stage ia t1c n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 4 NA NA 2 6 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5812576 9.1417383 11.0882519 8.8037818 8.8836960 9.7685924 9.1945183 9.8465949 11.4649160 12.2606254 10.7111991 10.0791414 3.6697525 17.5093064 4.2912425 11.4407320 6.5913623 8.6680156 8.6904101 11.6072941 1.2912499 11.0950471 5.5391650 9.8000716 9.6185670 6.8334973 -1.0306192 9.7894898 9.1354738 3.0567743 8.8792040 8.4470692 NA 5.2547112 9.3080473 9.7107779 9.0804463 9.6176684 9.2124847 10.8303977 11.6138431 8.3594799 14.9985980 7.7169669 9.4460571 10.2249296 9.7090914 5.6417368 1.2912499 8.3573281 10.7790789 0.5542450 11.0003227 6.2547131 8.0218789 6.9749354 10.0394318 11.4140669 10.0380891 11.5582596 12.6254004 7.9264128 10.4967878 9.8761112 10.8870558 10.6412940 3.8675209 11.2101021 8.8807027 0.9693071 10.6775326 8.7175037 3.1255519 6.0137057 10.4845178 9.6086514 10.0882519 9.2266985 3.5542696 9.2523991 13.3523400 12.1059816 9.8014096 9.3976710 0.00444110 0.00444110 0.00444110 -0.00041585 -0.06646200 0.00000000 0.00226600 0.01544700 -0.16421000 -0.00415460 -0.00415460 -0.00415460 0.10307000 0.10307000 0.01101800 0.01101800 0.01101800 -0.07765800 -0.05725000 0.00013863 -0.06195800 0.00208050 -0.16891000 3.65690000 -0.00387790 -0.01326400 -0.01326400 -0.01326400 -0.04604100 0.00444110 0.00444110 0.00110930 -0.00041585 0.00000000 0.00000000 0.00226600 0.00226600 0.01544700 -0.16421000 -0.16421000 0.14846000 0.14678000 -0.00415460 -0.05212600 -0.10129000 0.00208050 -0.02027600 0.10307000 0.10307000 0.00161730 0.01101800 -0.00465920 -0.00465920 -0.05725000 -0.05725000 -0.05725000 0.00013863 -0.06195800 0.00208050 -0.17983000 -0.16891000 0.40294000 -0.12875000 -0.03092400 -0.01326400 -0.05950000 0.03439500 -0.02185600 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 0.000 10.42052188 13.73485590 7.11396923 10.01507044 5.61316622 10.73086205 5.92350815 3.05677426 9.38188055 9.52964372 NA 7.77021062 4.94659051 10.10950147 9.51716938 1.55429414 10.35031292 9.07783528 11.04077314 9.98611907 9.60305082 6.85195388 11.36778728 4.49287224 7.34435006 10.37657853 3.49287865 -1.03061924 12.57825861 3.29123518 13.68000962 12.07472829 9.43895254 9.81793370 10.69935634 9.58310026 5.29123886 2.42873200 0.55424502 7.40393914 8.51813263 10.04545826 9.21248471 4.17876244 8.85586079 9.58861383 9.89338102 5.80220097 9.43487713 -0.03061924 10.57293712 4.69722893 4.39557698 9.61211157 7.59143558 7.42463829 10.56689781 9.11141792 9.39242669 4.39557698 14.05303941 1.77665148 10.44706907 -1.03061924 10.04077314 6.75067081 7.90300150 9.05677371 12.16157433 6.66279795 8.81166112 17.50930636 10.16959635 10.26105709 11.60729411 9.74985049 8.99859805 10.05544703 13.43181307 10.71119908 8.35732811 8.12665750 -0.03061924 7.26851861 10.50992322 11.335633 4.013703 9.076528 8.443016 9.017798 10.024085 8.935095 8.293491 10.711199 7.652305 2.876193 8.993065 7.461965 12.209655 11.012680 8.005484 9.478096 9.195723 8.426692 10.601111 9.080446 10.527253 10.092786 9.864886 11.500692 10.258753 8.502640 2.428732 10.194922 9.047462 11.000323 7.830398 11.345165 10.039432 7.134469 14.576728 10.117787 10.325212 12.292647 11.305817 9.157900 3.428745 TCGA-LL-A440 61 0 NA 759 breast stage ia t1c n0 (i-) mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 1.040392e-07 1.014180e+01 9.421484e+00 1.148963e+01 9.411631e+00 8.319039e+00 9.084929e+00 1.025869e+01 9.818170e+00 1.105879e+01 1.164277e+01 1.058821e+01 1.017505e+01 5.000122e+00 1.262126e+01 3.170053e+00 1.137715e+01 6.022488e+00 8.822426e+00 9.821363e+00 1.099424e+01 4.248049e+00 1.218644e+01 7.238525e+00 9.934794e+00 9.992587e+00 4.700562e+00 1.442623e-04 1.258605e+01 8.263780e+00 4.874590e+00 8.430573e+00 7.440297e+00 1.415164e+00 4.369355e+00 9.756677e+00 1.028937e+01 9.491973e+00 1.066486e+01 9.739338e+00 1.140278e+01 9.743833e+00 1.031565e+01 1.510660e+01 8.957474e+00 1.013112e+01 1.126769e+01 1.083564e+01 5.763887e+00 4.772709e+00 8.952376e+00 1.160081e+01 NA 1.073652e+01 7.544441e+00 7.173381e+00 7.357673e+00 9.925922e+00 1.165580e+01 1.035032e+01 1.242569e+01 1.280962e+01 8.458185e+00 1.056332e+01 1.073599e+01 1.080021e+01 1.122754e+01 5.115599e+00 1.120265e+01 1.116858e+01 1.000144e+00 1.079427e+01 8.779292e+00 4.429516e+00 6.309975e+00 1.041481e+01 9.987858e+00 1.065027e+01 9.166702e+00 5.143079e+00 8.309976e+00 1.365461e+01 1.294946e+01 1.009376e+01 9.919977e+00 0.05751100 0.05751100 0.05751100 0.00000000 0.00000000 0.03622900 0.06451100 -0.06236100 -0.06236100 0.41212000 0.01572700 0.01572700 -0.06172700 -0.05846200 0.09669100 0.60214000 -0.06128600 0.12833000 0.31306000 -0.06370300 -0.05738500 -0.00086871 0.03129500 0.03129500 0.03129500 0.57987000 -0.00443120 -0.00443120 0.04968200 0.05751100 0.05751100 0.00777830 0.00000000 0.03622900 0.05154100 0.00527490 0.00527490 -0.06517900 -0.06236100 -0.06236100 0.11301000 0.10891000 -0.11508000 -0.00456950 -0.00456950 -0.00456950 -0.00456950 -0.05846200 -0.05846200 0.09669100 -0.00650500 -0.06128600 -0.06128600 0.12833000 -0.06061400 -0.06061400 -0.06370300 -0.05738500 0.02132300 -0.07715300 0.03129500 0.03129500 -0.00470790 -0.00968060 -0.00443120 0.04968200 -0.00221680 -0.03354100 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 0.000 9.5598160466 14.2727986095 6.8745892009 11.3611501280 4.8489533768 10.7109266820 3.9697491283 2.4151637296 8.9298717566 10.3179096700 -0.5848903678 8.6540760253 4.8745904304 9.3845441802 10.2184816244 5.0150693217 11.6664921860 9.5819484800 9.7655445256 9.4690835552 9.7844388744 7.8888637728 11.8117624911 4.5850827203 9.7831184012 10.7172253819 6.2793431412 NA 11.2535738078 4.0001172142 12.5900054106 12.0393820311 8.8192348374 9.8939273215 8.1948769919 9.1997925644 5.6439773711 3.7005617872 0.4151096322 5.5649055156 8.9357764812 9.7115004131 8.6000329378 6.9110132119 9.6874841658 6.8663689681 10.2132244190 5.3340211548 9.5483000169 0.0001442623 12.3555631075 4.3924410771 5.8330114992 9.2738226349 6.6041914444 3.7727091371 9.9552857736 9.5540694263 6.3751593613 6.5850827203 13.2843177671 1.7370810052 10.6660482940 -1.5846739906 7.5495836968 6.9189836556 8.1016584795 9.1447785474 13.0992428 5.4485805 8.3635250 12.6212563 10.0472442 9.8466553 10.9942379 11.8634031 8.9445882 10.9577060 13.9510406 12.1281145 8.9523761 7.5925774 -0.5848904 7.4866203 10.9707055 11.936022 6.149867 9.017857 8.401000 8.241706 10.266540 7.631904 7.670186 10.588210 6.575029 3.322044 7.282436 7.246085 11.899855 10.790197 8.058437 9.213629 11.581792 7.098152 11.804372 9.491973 10.508245 9.978831 11.096835 10.896705 10.623697 8.300854 4.807473 9.806654 5.575028 10.736522 8.847700 11.504774 9.925922 7.510661 13.820000 9.674901 10.194877 12.841422 10.786390 10.253968 3.502623 TCGA-LL-A441 62 0 NA 996 breast stage ia t1c n0 mx female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 3 5 2 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-06 6.242351e-07 10.07394820 8.83075445 11.37267851 9.26585551 8.58675011 9.49529403 9.54600697 10.63067876 10.53073366 13.17279534 11.17328718 10.67108191 2.42037460 11.77208421 2.50283976 9.50407948 6.55207115 9.21630959 11.54128943 8.96680593 0.65480213 10.11056892 7.98574746 9.73174244 9.83672845 7.26659354 2.42037460 10.24600529 10.75391553 2.65482503 9.06337270 6.99468041 -0.08207184 4.69045621 9.63497037 9.55630104 9.20403774 10.67414344 9.88701174 11.72843679 5.77584596 8.66940915 14.66668695 8.81335954 9.74547248 10.86914986 10.96112031 6.14025718 1.65484794 8.98485134 11.00023597 NA 10.23716095 6.32725622 8.15626969 5.16579137 10.11097978 12.06050407 10.46764987 10.96794051 13.06496405 8.04370922 10.28746248 10.48695807 11.16954480 11.08381895 5.51281156 11.72280284 8.94577126 5.59968973 10.70168195 9.34622539 6.37773458 6.34971027 11.57384304 9.45831617 11.43422179 9.30659992 3.19088346 6.84069737 13.08303387 12.22430665 10.37729676 9.72038159 0.1110400 0.3261600 0.7492800 0.0079915 0.0079915 -0.1673200 0.3637100 0.2065800 -0.0273250 0.0768830 0.0768830 0.1263100 0.5582400 -0.0566960 -0.0532690 -0.0532690 3.6569000 0.1504700 0.0000000 -0.2843500 -0.2178100 0.1845800 -0.1227400 -0.0270350 -0.0270350 -0.0096072 -0.0096072 -0.0681140 0.2841400 -0.2402700 0.1110400 0.0068784 0.0079915 -0.1673200 -0.2195400 -0.2844000 -0.2844000 0.2065800 -0.0273250 -0.0273250 -0.0579710 0.3960400 -0.2661800 -0.1580300 -0.1580300 -0.1580300 -0.1580300 -0.0566960 -0.0566960 -0.0532690 -0.0532690 0.1075300 0.1075300 0.1504700 0.0000000 0.0000000 -0.0872440 -0.2441100 -0.2697800 0.1708400 -0.1227400 -0.0270350 -0.3257700 -0.0096072 -0.0681140 0.1670800 0.2233800 -0.0685920 0.000 0.000 0.108 0.108 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.108 0.108 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 0.000 11.11467220 13.01205283 3.82475767 10.75785625 7.82074252 13.25330203 9.89419054 4.08779377 9.78771601 8.14186701 7.46475974 8.24878196 4.48264825 9.82275054 9.98215879 4.72521763 10.29145541 9.96816738 8.74653044 9.51218974 9.85208672 7.79438207 11.33677187 3.08778529 8.97495428 10.44403837 4.48264825 -0.08207184 10.92138307 4.74229192 12.94640439 12.19204914 8.46861183 10.27724869 10.88677189 9.78462896 4.42036787 1.50283976 -0.08207184 1.79231398 9.14668373 9.88364938 7.38547073 4.58083289 9.63426163 7.26364010 9.74176308 5.77584596 9.93652900 1.33290839 12.62522429 4.99111364 7.62522445 10.62057175 7.02816577 9.85253887 9.82775822 8.80050812 9.33712323 1.50283976 13.67643540 0.65480213 11.46073581 NA 9.39224722 6.59029062 7.82275054 8.22923509 12.674132 6.690455 8.331493 11.772084 10.042417 10.411053 8.966806 10.464438 9.553837 11.153036 13.286963 10.926994 8.984851 8.008860 4.114259 7.634399 11.346749 10.567121 4.887491 8.915985 10.101914 8.281270 9.733382 10.184261 9.115901 11.173287 5.636683 5.925359 10.088208 9.082244 10.844408 11.121417 6.887491 8.702500 9.716607 9.138647 11.993515 9.204038 10.227720 10.447946 12.355184 10.731646 10.217073 8.896099 NA 10.227387 10.729775 10.237161 5.784114 11.042848 10.110980 7.699225 13.707535 9.548436 10.567720 12.339492 12.098396 9.750755 2.140255 TCGA-LL-A442 56 0 NA 889 breast stage iia t2 n0 (i-) mx female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.15695311 9.80291503 12.17958600 9.95977624 8.16888368 8.12526261 12.06085380 8.98143742 9.83977634 13.74213443 11.43573791 10.41598867 -0.35993442 13.18402198 3.37706821 10.19213263 7.00933821 7.59235986 6.46453268 13.20738679 4.07750792 14.09009094 7.31017014 9.78938122 10.76444079 6.09406079 0.05519565 11.46625524 10.01478138 2.05512623 7.58847104 7.70260006 NA 5.16366779 10.44450402 9.88605289 10.70507127 10.32192809 10.18571209 11.85765791 1.64011187 10.44745894 14.76456198 8.57377517 9.77794912 12.62831535 11.04595462 3.00932925 9.02308815 8.97549434 10.13729064 -1.94508208 10.81606933 3.09953086 5.45602086 4.75558197 10.43668448 11.70293722 10.42473895 11.70451002 13.02488781 7.33126631 10.35291761 10.77054373 11.30292075 11.38535818 5.86892377 12.53964981 11.92077819 -0.94480435 10.15678895 8.50635281 2.38067404 6.22004936 9.16562483 9.57772300 10.79048600 9.27491506 -0.35993442 3.41270024 11.63704826 11.05971320 9.91584055 9.20298233 0.00000000 0.00000000 0.00000000 -0.00401620 -0.00401620 -0.00166290 -0.00304750 0.00069327 0.00069327 -0.00041585 -0.00041585 -0.00107330 0.00263570 0.00263570 0.00069327 0.00069327 0.00069327 0.00416320 0.00416320 0.00235810 0.00041593 0.00180300 0.00708260 0.00708260 0.00708260 0.00917050 0.00917050 0.00917050 0.00471900 0.00000000 0.00000000 -0.00083160 -0.00401620 -0.00166290 -0.00166290 -0.00304750 -0.00304750 0.00069327 0.00069327 0.00069327 0.00110930 0.00110930 -0.00041585 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00263570 0.00263570 0.00069327 0.00069327 0.00069327 0.00069327 0.00416320 0.00416320 0.00416320 0.00235810 0.00041593 0.00180300 0.00346870 0.00708260 0.00708260 -0.00318590 0.00917050 0.00917050 0.00471900 0.00121480 -0.23521000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.40718490 11.50892660 6.46453268 9.82415286 4.06770755 11.29025828 -1.94508208 NA 8.53593163 7.01803768 NA 6.36802446 -0.35993442 9.84100273 9.42473884 1.86251090 1.86251090 9.60588838 14.36433366 11.46174520 10.02203984 9.31664878 11.81897635 4.46453105 10.25389357 10.20869356 2.69899630 NA 10.71602881 4.00933821 12.61122843 12.54599242 8.06776616 10.14061405 8.46665240 8.98366003 0.05519565 4.05514358 0.64006558 5.32192809 9.46506270 10.01622942 9.99545512 1.75557128 9.30156753 7.04949464 10.53365844 4.87531809 9.59865682 0.37706821 12.01559607 2.30307932 11.23256111 9.25985952 7.43577609 -1.94508208 8.75123976 7.70260006 9.35835142 NA 13.21023648 -0.94480435 10.39915998 0.37706821 5.81669186 3.54699321 7.49185310 9.45762076 14.524530 5.438845 8.873724 13.184022 10.348613 10.396660 13.207387 13.760180 8.948132 10.801026 12.430656 10.453618 8.975494 8.253587 1.055126 7.836501 9.988832 10.84711836 5.34976157 7.80668559 8.98809442 9.45975086 10.58783835 8.15185679 5.20488801 11.43573791 7.21753319 2.14260949 2.91312877 8.25711861 9.37988474 10.20584089 9.81540411 9.35091046 12.81679666 1.96203071 11.79768361 10.70507127 11.86812102 10.16366603 15.06234406 9.85077536 10.39415644 9.45975086 NA 9.53856435 -1.94508208 10.81606933 0.05519565 11.33765083 10.43668448 7.73813618 12.94863269 10.54574177 10.12626863 12.82249842 9.35892235 9.80291503 0.37706821 TCGA-LL-A50Y 84 0 NA 762 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.935946e-07 4.161568e-07 9.10460033 7.80115154 10.71371437 5.01979086 9.09259437 8.82875596 10.40241586 9.11254898 11.26177502 11.70124992 11.16795065 9.72628782 NA 13.83252070 1.60473557 10.02260681 4.63450034 7.53549157 9.32471364 12.99043704 NA 14.01644188 6.35070939 10.75035963 9.85663126 6.74771232 1.01977307 10.54286366 9.16062175 1.60473557 7.73403756 5.51164514 NA 2.82714832 8.84315916 9.33154019 10.16253710 11.03031994 8.87932654 9.55506724 7.89015664 11.11946843 13.16914206 5.43307963 9.81339514 9.94534624 9.68690334 4.01979086 7.69221725 7.05321454 10.70629242 -0.98022693 10.28716382 5.83996966 5.39482965 3.54335977 9.26296584 11.59627619 10.80851023 11.83297180 11.86410534 8.78797632 10.30634963 9.88942426 10.19471759 9.80769446 0.01977307 11.19689992 7.22436254 NA 10.03381239 6.95642959 1.34170116 4.01979086 10.27186590 9.01979197 9.50259972 8.09393354 1.34170116 10.24740776 11.60475438 11.65777517 9.74856270 9.78217395 -0.0059858 1.2705000 1.2705000 -0.0055375 -0.0055375 -0.0138340 0.0000000 -0.0026322 -0.0139530 -0.8299300 -0.8299300 -0.0051011 0.0130740 0.0130740 0.0052749 0.0052749 0.0052749 -0.0052610 -0.0052610 0.0104240 -0.0011087 0.0139110 0.0148880 0.0148880 0.0148880 0.0044411 0.0044411 0.0044411 0.0263730 0.0112610 -0.0059858 -0.0138010 -0.0055375 0.0075000 -0.0106460 0.0000000 0.0000000 -0.0026322 -0.0094392 0.0073609 0.0058309 -0.0018014 -0.8299300 0.0084399 0.0084399 0.0090312 0.0090312 0.0130740 0.0130740 0.0052749 0.0052749 0.0052749 0.0052749 -0.0052610 -0.0052610 -0.0052610 -0.0037395 -0.0011087 0.0139110 -0.8593200 0.0148880 0.0148880 0.0231450 0.0044411 0.0044411 0.0263730 0.0066590 -0.8564100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 0.000 8.5275865 12.9385620 3.1897139 9.6609404 4.1897139 11.2120847 3.1072527 NA 9.5628238 7.0858814 NA 5.0421584 2.3417296 10.0764296 9.5354918 2.0198086 5.7879757 7.8495146 10.9808797 11.7871487 9.8375190 5.9623061 10.3195722 1.3417012 7.6085062 9.3269927 5.4627362 -0.9802269 10.8044267 1.6047356 12.9877386 12.4478903 7.0027858 9.8629277 8.0532151 10.1733438 1.3417012 3.5433598 NA 4.1072527 9.8198829 11.4879067 10.0682788 2.0198086 9.4134291 8.9534826 10.5652390 5.8777737 9.9047255 NA 10.9153672 0.6047356 4.2677231 9.3529472 6.7838010 4.9505291 9.2194643 7.6600366 8.4585838 -0.9802269 13.9274337 NA 10.8411673 NA 7.4914667 4.3417225 6.6491484 9.3201444 13.453019 4.341723 8.479223 13.832521 9.913852 11.387207 12.990437 11.544089 8.549222 9.476146 12.293296 8.505621 7.053215 9.361867 1.341701 7.058710 9.913093 10.18092372 5.39482965 8.83357292 8.66003691 7.45442022 9.72186068 7.61970498 7.98845861 11.16795065 7.51963783 -0.98022693 8.96669809 6.72790957 7.66003655 9.64550065 7.91460937 10.06486898 5.55895024 5.66364918 11.93069687 10.16253710 10.58441772 10.37844302 10.34171995 8.71153552 9.76378468 6.34172073 NA 10.25536335 6.39483136 10.28716382 4.74770963 10.75872857 9.26296584 6.76125867 13.99595319 10.84713457 10.50108679 12.17255202 10.94349078 9.14002961 0.01977307 TCGA-LL-A5YL 64 0 NA 519 breast stage iib t2 n1a mx female 2012 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 2 NA NA 2 4 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.242351e-07 8.6574896 8.4408044 9.8642004 4.3891400 9.6042710 8.5969702 9.1429163 9.2346326 11.4895858 10.1266716 10.9840891 9.7843196 4.6370711 13.5685333 2.6115265 10.5312496 6.6433844 7.8809958 9.9198740 12.2692361 NA 12.8120833 7.7020251 10.5592178 9.8956154 6.6621613 NA 11.2476183 9.7371329 NA 8.2960329 5.9940049 0.3891262 3.7583778 9.0532936 10.1451427 9.3452766 10.5557240 9.4588161 9.8614948 2.9741071 9.7714063 14.1090304 4.8588115 9.6195632 9.4170485 8.9715982 4.2304413 6.2135709 7.2093218 9.8601402 NA 10.6929233 5.3433403 5.3587690 3.3277448 9.5063526 11.8122584 10.9725387 11.1443082 11.7127602 10.0075280 9.8869944 9.8655511 10.0323975 8.7304759 0.3891262 10.9357154 11.0913152 NA 9.9940046 8.3257804 4.1617345 2.7110764 10.8550489 9.2429718 9.6457443 8.3966369 1.1261139 8.5235686 13.4695714 12.7507208 8.9989367 9.1261082 0.64598000 1.41860000 1.49110000 -0.53701000 0.00979450 0.00763920 0.00388540 -0.00069303 -0.00069303 0.00049443 0.00049443 0.01112100 0.00555290 0.00555290 0.00041593 0.00041593 0.00041593 -0.00615870 -0.00615870 0.00000000 0.00221930 0.00471900 -0.01147300 -0.01147300 -0.01147300 -0.02219500 -0.02219500 -0.03040400 0.00319100 -0.50970000 -0.51880000 -0.00401620 -0.51414000 0.00763920 -0.00304750 0.00388540 0.00388540 -0.00069303 -0.00069303 -0.00069303 0.00000000 -0.00415460 0.00624810 0.00138680 0.00138680 0.00138680 0.00041593 0.00555290 0.00555290 0.00041593 0.00041593 -0.52589000 0.00597000 -0.00615870 -0.00615870 -0.00615870 0.00000000 0.00221930 0.00471900 -0.51094000 -0.01147300 -0.01147300 -0.51373000 -0.02219500 -0.53134000 0.00319100 0.00249690 0.03199900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 -0.510 1.491 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 -0.510 1.491 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6989977 13.2214392 7.2093218 9.0245582 3.7110653 11.1272347 4.8702710 4.0895829 9.8856634 8.7525472 -1.1959464 6.6806971 5.0709646 10.5941211 9.7371329 4.9741071 7.2839607 8.9283013 11.5000607 11.1773170 9.8207864 6.0895829 9.8140086 0.7072597 8.7080617 9.9646818 3.8485779 NA 10.7630952 3.1261139 12.6550505 11.9582069 7.6211640 9.9231211 9.0580275 10.4417106 1.9740887 1.3891262 NA 10.7027813 9.0872684 11.1289231 10.8648759 4.1261056 9.5237056 10.6971022 10.5781434 5.9437315 9.7864606 NA 9.5456470 0.3891262 4.2636129 9.8187654 6.0803038 3.9741071 9.1440300 8.0686224 8.1261082 0.3891262 14.3785665 -0.1957812 10.5188548 -0.1957812 7.8594621 4.8041775 8.1440300 10.0130239 11.3987285 7.9488385 8.8540284 13.5685333 10.3839673 12.2499708 12.2692361 9.6441710 8.6050798 9.3928946 12.8025060 9.1661237 7.2093218 9.3692822 0.8042188 7.4836602 9.8526668 10.2220325 4.3587690 8.3413983 8.5707088 8.2839602 8.9072055 7.7928645 6.0895829 10.9840891 8.0895824 NA 10.3447924 6.4429054 10.2141012 10.0419875 7.5789674 10.3040259 3.1261139 5.8376027 11.4843879 9.3452766 10.5261336 10.1153606 10.4036280 9.5295463 9.6362788 5.1440300 0.8042188 8.9347633 6.9840892 10.6929233 6.0895829 10.0568454 9.5063526 7.3702340 14.1282902 10.1221579 9.8048843 12.0753512 12.1668088 8.9551965 NA TCGA-LL-A5YM 88 0 NA 466 breast stage iiib t4b nx m0 female 2012 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 7.6960084 7.6455093 9.6763797 4.5817128 10.0376517 7.8663275 8.7310271 8.8360876 11.1535054 13.4050119 9.4700670 10.1800422 NA 14.0502715 0.6121166 11.3777866 6.8663269 7.1970486 6.8974885 12.2903928 NA 13.8121673 NA 11.0899994 8.9637617 9.5129530 NA 9.4834780 6.4449768 -0.9728459 7.2218800 4.4533859 NA 3.8344786 7.6418336 8.2462922 9.8060221 5.5028557 7.4407513 10.5462684 1.6120694 5.8600143 14.1057331 3.5291963 10.7626796 8.6436726 9.4512898 2.4865599 6.7413686 7.1251562 8.0796917 NA 10.1926587 4.3846784 3.2750518 4.8600143 8.0687826 11.1185589 10.8990288 11.2444755 11.2625395 10.6102064 9.7903360 9.9703710 9.3835756 8.5855443 NA 10.5860225 11.4512898 NA 9.2511252 7.8247850 1.3490255 2.4865599 10.0001034 8.3125259 10.7953079 7.5931775 1.6120694 4.9813184 10.6125556 10.8816024 8.9204252 9.3691982 -0.64246 1.02140 1.02140 0.19527 0.20962 -0.21812 0.67884 0.15540 -0.65454 -0.24642 0.27332 1.21540 0.78910 -0.65882 -0.65389 -0.65389 -0.65389 -0.66671 0.19299 -0.63510 0.19654 0.16505 -0.69432 0.91420 0.91420 0.06537 0.06537 0.06537 0.14355 -0.70379 -0.64246 0.00000 0.20678 -0.21812 -0.20274 -0.15886 -0.14901 0.15540 -0.65454 -1.29290 0.10934 0.17633 -0.67343 0.18525 0.18525 -0.66383 -0.66383 -0.65882 -0.65780 -0.65389 -0.65389 -0.65389 -0.67196 -0.66671 0.22068 0.14846 -0.63510 0.19654 0.16505 0.14221 -0.69432 0.91420 -0.21923 0.06537 0.06537 0.15472 -0.26360 0.14950 0.822 0.183 -0.654 -0.654 -0.505 0.148 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 0.000 0.822 0.183 -0.654 -0.654 -0.505 0.148 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 0.000 7.29858684 12.13286842 5.61208706 8.64367260 NA 10.96633543 0.61211655 0.02715405 9.82883195 7.02147751 -0.97284595 6.72061091 5.92194088 10.22188046 9.31252587 1.83446852 6.64183356 8.04393173 7.08781923 13.14492899 9.13172220 5.72756382 10.81094029 NA 9.99290790 10.49421958 2.34905383 NA 11.02430306 1.83446852 12.51408425 12.75791211 6.51093977 8.48860297 7.95786064 11.24113909 0.61211655 4.75504245 NA 2.83446852 10.29449554 11.10159959 8.82153931 4.38467843 9.03945483 9.88898596 9.69866456 2.48655993 10.65009056 NA 10.14281751 NA 8.17940854 9.70162477 8.57944681 4.86001426 8.74993109 8.48245062 8.93551632 0.61211655 14.16359408 NA 11.97676795 NA 8.56434196 3.72756110 6.51093977 10.46175179 12.386972 7.494729 8.532935 14.050271 9.147361 11.254439 12.290393 12.137933 8.229248 8.522978 12.110104 10.004403 7.125156 8.510939 1.027154 7.815026 8.486555 9.4375750 4.8084829 7.3934454 8.3240396 8.7048256 7.7636944 6.0158075 10.0036877 9.4700670 9.6799686 -0.9728459 4.2365768 7.6248780 6.9158662 7.7101183 8.3195601 10.7865957 2.3490538 4.8600143 9.9661224 9.8060221 11.0122540 9.9013365 6.8150259 9.2892185 9.7652158 5.6995489 1.3490255 9.4271385 5.2939112 10.1926587 6.8663269 9.5269694 8.0687826 6.4947292 13.5964452 10.5619128 9.1653955 12.6199310 10.0467144 8.1970486 0.6121166 TCGA-LL-A5YN 46 0 NA 447 breast stage iia t2 n0 (i-) m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 1 4 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 8.4032592 7.7638491 10.7009397 5.0857773 9.6707394 9.1321874 9.0746366 9.4021455 10.3791248 12.5816935 10.5032401 10.0513837 3.0634167 13.8233494 2.5228342 9.1415600 7.3808221 7.8116020 9.7612455 12.2557020 0.9932033 13.4265173 6.7776551 11.1059133 10.2016810 7.4121371 0.6483734 13.3230789 11.4093688 0.6483734 8.7393661 5.1078050 NA 4.0176013 9.2080675 9.7099679 9.2507612 9.1521974 8.9213902 9.6323153 5.7216215 10.3568809 13.8980284 5.8734663 10.0753353 8.8031899 9.0968321 4.8963009 2.9703015 7.1823506 9.2752974 NA 10.1548446 6.0059232 6.5472246 4.5552640 8.4621530 11.7211742 10.4626871 11.0474715 11.8592459 9.2593966 10.1823503 9.8082430 9.9383905 9.5431894 1.3853206 11.4021456 9.9345444 NA 10.3278518 9.2789421 2.9703015 4.9213887 11.1485496 8.9291424 10.1294984 9.2029605 2.3853482 9.4043720 12.4490020 12.3541480 10.1888226 9.8763886 -0.0414310 0.5594800 0.5739800 0.0153080 0.0144700 -0.1062900 0.0452820 0.3055300 0.2148400 1.5633000 -0.2962700 0.9994500 -0.0715490 -0.0715490 1.8363000 -0.0040162 -0.0040162 0.0234260 0.0210430 -0.0340960 0.1150600 -0.2306500 -0.5125900 0.9686400 0.4044400 0.3181900 0.3181900 -0.0053992 0.2791600 -0.0414310 -0.0414310 0.1469700 0.0153080 -0.2032400 -0.1062900 -0.2310300 -0.2310300 0.3055300 -0.2399200 -0.4183100 -0.0327230 0.0087528 0.9403700 -0.0582880 -0.0582880 -0.0582880 -0.0582880 -0.0715490 0.0496820 -0.2278500 -0.0040162 -0.1103700 -0.1103700 0.4980500 0.0210430 0.0210430 -0.1383800 0.0000000 -0.2276100 -0.2178700 -0.0193140 -0.1430200 0.0034687 -0.1540000 -0.0053992 0.2791600 0.0158660 -0.2407000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.559 0.279 0.279 0.000 -0.241 0.137 0.137 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.703 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.559 0.279 0.279 0.000 -0.241 0.137 0.137 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.703 0.000 0.000 0.000 0.000 10.8353112 12.4166939 6.8513118 9.8357237 7.1719334 10.8270365 7.6558663 NA 9.7586375 7.3580296 NA 6.0520941 4.4896714 10.3260914 9.8779916 4.5552640 8.2655330 8.6817946 9.7655818 11.8303521 9.3377407 7.2433187 9.4231588 2.6483734 8.4833692 10.1098512 4.8447673 -0.9364971 10.8943205 3.8182984 13.4227469 12.6213514 7.1823506 8.9322316 10.6716640 10.2916266 5.5869719 1.0634339 NA 9.4780943 10.3366219 11.1884997 9.7189399 2.5228342 8.8091340 8.6313652 9.8978802 5.7638497 9.9468161 0.6483734 10.9676674 2.3853482 3.2333359 10.1344692 7.4391003 7.0234106 10.3660481 8.7054610 9.4546528 -0.9364971 14.1334462 1.0634339 11.0985519 0.6483734 7.3160742 4.3113360 7.5552625 7.8771903 11.562640 7.774216 8.197835 13.823349 10.185590 10.517194 12.255702 10.767745 9.176917 9.679039 12.653996 10.900643 7.182351 9.359178 4.017601 8.011776 9.295830 10.4154526 4.1508683 8.7879231 8.6464921 7.2182271 9.8287368 9.5850097 7.8578249 10.5032401 7.6964042 0.6483734 8.1428938 7.4002724 7.8899578 10.8464074 8.6122312 9.7287450 4.8182984 8.5472250 11.4656378 9.2507612 10.8439489 10.6141559 8.4187605 9.4088144 10.5366076 5.2728630 NA 9.9883108 8.9491056 10.1548446 4.8447673 11.1197082 8.4621530 7.4514263 14.5736170 10.1482175 10.1152978 11.9180828 11.1169957 9.2395823 2.0633994 TCGA-LL-A5YO 50 0 NA 440 breast stage ia t1b n0 mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 4 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 2.427581e-07 10.3131116 8.3897329 11.1383773 7.2687179 8.9305972 9.1109781 9.3956432 9.9500061 10.5541196 12.2187525 10.6737373 10.3415583 2.4613714 12.4734283 3.1394368 11.1569388 5.9338511 8.7796793 7.1052192 11.4776137 -0.8606615 10.7513814 7.7393472 9.9981381 11.1433037 6.4155593 3.2268938 13.9001544 12.1311334 1.7243883 9.7476892 6.4432154 NA 6.2374662 9.7309568 9.6009138 9.3464488 10.0220774 9.2189192 10.5875507 5.6312877 7.9240690 14.1825899 7.3172028 9.4647399 9.6292823 9.2321916 4.4248348 2.8398790 8.3706556 10.6131402 -0.8606615 9.7596542 6.5231385 8.3968222 6.4523170 8.9707418 11.9133978 11.1397866 11.6734941 11.9534160 7.5101217 10.3694548 9.6671264 11.2777062 10.3628328 3.5988654 12.1675131 9.7967528 NA 10.3236899 9.7196931 2.7255885 5.8943230 11.0954475 9.3549674 9.7805831 10.2135758 4.1394368 9.4236803 13.0242727 12.0034270 9.9675710 9.8528210 0.10133000 0.10133000 0.10133000 -0.02835500 0.05822400 -0.04813200 -0.04801600 0.00000000 0.00000000 -0.17702000 -0.17702000 0.59069000 0.11038000 0.11038000 -0.04238100 -0.10715000 -0.10715000 -0.08601000 0.01279500 -0.24671000 0.14652000 0.02048300 -0.10342000 -0.10342000 -0.10342000 0.09856000 0.09856000 0.09856000 0.09246000 0.10133000 0.10133000 -0.07553800 -0.02835500 -0.04813200 0.03707600 -0.04801600 -0.04801600 0.00000000 0.00000000 -0.12649000 0.03933700 0.02358600 -0.17702000 0.05252500 0.05252500 0.00987340 0.00068205 -0.11665000 -0.11665000 -0.04238100 -0.10715000 -0.10715000 -0.17689000 -0.08601000 0.01279500 0.01279500 -0.23195000 0.14652000 -0.00492470 -0.05684600 -0.10342000 -0.10342000 -0.14207000 0.09856000 0.09856000 0.09246000 0.48492000 -0.11652000 0.110 0.110 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 0.000 0.110 0.110 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 0.000 11.0128786 12.8502409 3.0463164 9.1851941 7.3391071 10.6776234 7.6151676 2.4613714 9.6892191 8.5424465 3.1394368 7.3668100 4.8943230 10.7596542 9.8968245 2.9467870 9.0448214 9.0760724 9.3131116 12.1410185 9.4167684 6.5057560 10.2590241 2.4613714 7.1450589 10.2427222 3.7832890 NA 10.9997455 2.9467870 13.1646605 12.7512661 7.8502406 10.1217151 9.5709321 10.6737373 3.7832890 2.9467870 0.7243883 2.9467870 9.4759409 10.3956431 10.3168540 3.2268938 10.2172916 9.4737078 10.6452460 5.7687904 9.5968153 0.1394695 11.6985725 4.4613648 3.3873625 9.8677036 6.4018113 8.8792150 10.5865176 9.2904509 11.5916757 7.4340552 13.9336472 0.1394695 10.8592510 -0.8606615 8.5968152 3.9467870 8.7430608 8.9927441 9.661977 9.811860 8.672764 12.473428 9.730957 11.207541 11.477614 8.808319 8.716863 9.733759 13.053820 10.453451 8.370656 8.527452 4.268719 7.396822 11.177324 10.784192 5.694022 9.080482 9.003621 6.997415 9.783498 9.708341 8.919154 10.673737 8.061276 1.461371 5.116714 9.109627 10.471471 11.465583 8.869055 9.534969 7.363436 10.031218 12.963350 9.346449 11.058670 9.648220 9.882586 10.709290 10.316854 6.686328 5.289182 10.146952 10.330494 9.759654 5.709291 11.047452 8.970742 7.553062 13.971484 11.122072 10.782389 11.816714 11.964592 8.988057 4.694022 TCGA-LL-A5YP 49 0 NA 450 breast stage iib t2 n1a m0 female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.976745e-06 4.855162e-07 9.1237753 8.4034705 11.3562370 7.9967559 9.1956114 8.4433634 9.7816858 10.9072167 11.9644793 12.4686682 9.8211540 10.4391414 0.4395699 11.5872400 2.6620004 10.9516931 6.5341285 9.2608537 9.2264252 6.5057004 NA 8.7868632 8.2640395 10.1759397 9.6498766 7.1354189 2.6620004 12.2349744 11.1037620 4.9839330 8.1765766 8.4930845 NA 4.7372920 9.3850550 9.7365273 9.4101963 8.7883392 9.2044826 9.7326995 -1.1452862 5.6360097 15.9194545 7.2704747 10.8197114 10.8193505 8.9234270 4.7615406 2.8546540 8.6843713 10.3634338 NA 10.3884650 5.5128590 6.5550876 4.8546490 8.7912866 11.7521160 10.5846941 11.5281785 12.1212888 8.5270739 10.3796800 10.1485570 10.5645940 10.4688983 3.3782064 11.1365786 8.4693585 -0.1452862 10.7997266 9.6045180 2.5550799 5.7615379 11.5299441 9.4330214 11.0059823 9.0043958 2.8546540 5.2296879 12.3746534 12.7829819 9.5030062 10.9945197 -0.262520 2.348100 0.461890 1.821700 0.432770 0.399380 0.811190 0.032612 0.032612 -0.419480 0.976050 2.097900 0.031436 -0.052126 0.279310 -0.385490 -0.385490 0.384360 -0.399860 -0.244480 -0.393080 0.374950 -0.411900 -0.076812 1.171200 -0.410800 0.396920 0.550000 0.462460 -0.349160 -0.285720 -0.045499 -0.395080 -0.519450 -0.105520 -0.400190 -0.401520 0.162060 0.032612 0.361330 -0.234100 -0.366120 -0.426480 -0.091155 -0.098286 -0.205350 -0.279330 -0.053206 0.117560 -0.421890 -0.385490 -0.361810 0.401610 -0.374140 -0.136920 -0.136920 -0.985060 -0.396830 -0.395750 0.246380 0.165200 -0.076812 -0.117960 -0.444970 0.550000 -0.397970 0.752230 -0.054690 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.000 -0.205 -0.205 0.000 0.000 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.000 -0.205 -0.205 0.000 0.000 8.411155 14.448273 5.454561 10.204483 1.383220 11.504129 1.176578 3.102574 9.794228 8.476700 7.579163 8.278815 4.314080 10.559417 9.220971 4.140051 8.340478 10.385055 8.076236 10.876323 8.149614 6.297591 11.754949 1.176578 7.693852 10.397197 5.609536 NA 10.748329 3.439610 12.207658 13.005744 8.868669 9.424504 8.679607 10.828346 5.194497 3.439610 NA 5.454561 8.776490 9.443363 5.622834 4.877018 10.004631 7.773512 10.122606 5.083469 10.552919 6.989075 10.801920 4.469359 3.942111 10.321556 6.641637 6.527073 9.651499 8.572325 8.834788 2.314087 12.800732 2.854654 11.497152 1.176578 8.631082 6.454561 8.572325 8.095440 10.269112 8.637647 8.370348 11.587240 8.982643 10.483550 6.505700 10.067753 8.890822 10.513753 14.031601 11.870586 8.684371 7.808845 -1.145286 8.032068 10.219877 11.329875 4.246963 8.591051 8.409237 8.280913 9.970460 7.609536 5.687539 9.821154 11.467978 4.808843 9.964479 8.725275 11.952516 9.870064 7.994200 9.343493 8.619520 6.505700 9.810182 9.410196 10.098418 9.725784 12.113362 11.569967 10.360460 7.690699 NA 9.756941 7.609536 10.388465 7.516427 10.933113 8.791287 7.004396 13.452119 10.058608 10.096632 12.436438 11.212475 8.989075 2.662000 TCGA-LL-A6FP 90 0 NA 677 breast stage iia t2 nx mx female 2012 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 3 3 NA NA 1 2 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.17313993 8.10081790 10.61891825 5.83601752 8.93541054 8.48596975 10.04546973 9.04501096 9.79021277 8.33201237 11.51259579 10.09151711 NA 13.44886323 2.23398007 6.95410207 6.81894257 7.17816984 8.56617699 12.69881783 -0.57346686 14.27005586 5.61644886 10.39029462 10.55203896 8.99837803 -0.57346686 9.46623006 9.54296935 NA 9.22266499 4.30927079 NA 2.01160298 8.72468813 9.82910462 9.86073239 9.59529758 9.54426860 9.73211721 1.01156720 10.47647404 13.27392755 6.87672321 12.30362195 10.53645617 8.95800685 0.01163876 6.50344097 7.24360911 9.90691073 NA 8.99363078 4.25951354 2.95018843 2.81895279 8.47647404 11.61490521 11.09218345 10.18067787 12.04776160 9.65904633 9.53710869 9.77313921 10.52958536 9.25237923 2.95018843 10.76619718 10.47851412 -0.57346686 9.94724418 7.84025361 2.28160924 2.51409700 10.65784666 8.52465767 9.74177504 8.53906496 0.01163876 6.22752546 11.46982367 9.96092838 9.67158388 9.50943972 0.3951200 1.5227000 1.5227000 0.0105640 -0.0065868 -0.0051608 0.0081959 0.0056919 -0.0018999 0.0040243 0.0040243 0.0040243 -0.5568700 -0.5568700 0.0175440 0.0175440 0.0175440 0.5505400 0.5505400 -0.5672400 0.0225850 -0.5475400 0.0573680 -0.5271600 0.0380650 -0.5258700 0.0528100 0.0528100 1.1584000 -0.5394600 -0.5745700 -0.0171160 0.0105640 -0.0051608 0.0016642 0.0000000 0.0000000 0.0056919 0.0056919 -0.0018999 0.4840600 0.4735200 0.0040243 0.0263730 0.0263730 0.0263730 0.0263730 -0.5568700 -0.5568700 0.7294300 0.0175440 -1.2929000 0.0696690 0.5505400 -0.5861800 0.6039500 -0.5672400 0.0225850 -0.5475400 -0.5529600 0.0573680 -0.5271600 -0.5623600 -0.5193800 0.0528100 1.1141000 0.0300290 -1.2216000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.119 -0.549 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 0.000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.119 -0.549 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 0.000 6.51938307 10.77480032 4.49271205 8.99172761 0.01163876 11.92497610 -1.57346686 NA 9.84921586 4.28460297 NA 4.18151605 NA 10.53318838 9.06867726 0.42664048 3.38082640 9.46760005 9.77480040 11.83402605 10.36521638 6.36326396 8.81248796 0.74854711 9.49942796 8.40247363 1.23401073 NA 10.50810891 -0.57346686 11.83522057 12.06811279 5.36913840 10.28188333 5.67455387 10.65243540 4.42662706 0.74854711 0.42664048 5.11312537 9.78692384 11.66099384 11.03441809 1.59655355 7.61926333 8.02281498 10.69399739 3.95018843 9.64639904 NA 10.06415600 -1.57346686 1.88604282 10.26450957 6.51238967 0.42664048 8.14601415 6.12011343 5.57637399 1.01156720 14.63341092 NA 11.05393138 NA 3.74855784 3.33350961 7.70739641 9.35366271 13.2443451 4.0990511 9.3016069 13.4488632 9.9511673 11.7899389 12.6988178 8.9204809 9.4227246 9.9979040 13.1646122 8.3305073 7.2436091 9.3662046 0.4266405 7.9164737 9.9768913 10.0994927 5.4153091 8.5180610 8.5074430 5.9423245 10.0791791 5.6745539 6.0339559 11.5125958 6.2339801 5.6745539 9.2331751 6.0785373 6.0190836 8.9541024 7.6792908 10.8162568 5.8189426 0.7485471 12.0017262 9.8607324 10.8863132 10.4262732 10.2363936 8.6372969 10.1003763 5.2721165 4.9184769 8.5028398 1.5965536 8.9936308 1.4266405 10.0307153 8.4764740 6.3866282 13.5672556 10.4241578 8.9955317 10.7786689 10.2689759 8.8942312 1.0115672 TCGA-LL-A6FQ 77 0 NA 80 breast stage iiia t2 n2a mx female 2013 NA no infiltrating ductal carcinoma 7 black or african american not hispanic or latino NA NA 1 3 NA NA 1 1 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.05982789 8.42367061 10.84758632 4.77187502 8.60214580 7.68208024 10.63584924 9.56853171 10.63627623 13.48268305 10.99970002 10.18652544 0.49886356 14.07384578 2.37331412 9.54689080 5.51380970 7.17599059 8.03542926 12.58444124 2.23581895 13.77546723 3.82078145 10.56422038 9.64436573 5.34015988 -0.08604789 9.87895841 12.29732992 -1.08620104 6.23582278 4.82078655 -1.08620104 2.37331412 8.72446713 8.91248610 9.88687536 9.04317852 8.73885429 10.25708136 0.91387554 10.76759505 13.66329371 5.04770415 9.59073431 9.86809192 9.08382075 4.19929543 7.43745747 6.42168953 9.57834287 NA 10.73726289 3.00135189 5.54325150 4.16182320 9.19698393 12.16241622 11.09006881 10.86262790 12.06602200 8.87823641 9.58985260 9.95965527 9.74361830 9.24928604 2.49886356 11.90948612 10.60520299 NA 9.98132995 7.80567939 2.37331412 3.82078145 10.26040939 8.94731871 9.59776747 8.16892429 2.72124140 10.56718862 11.84942903 10.89760181 9.52952523 9.15349427 -0.0119340 0.5093200 0.5151900 -0.0135870 -0.0116300 -0.0185490 0.5204200 -0.0188120 -0.0189210 -0.0179880 -0.0179880 -0.0179880 0.5122200 0.5155400 2.8208000 1.0004000 2.5283000 0.5089200 0.4964300 0.5151900 0.5104800 -0.0151010 -0.0274270 -0.0274270 -0.0211450 0.2897100 0.3048400 0.3048400 0.5204200 -0.0184000 -0.0119340 0.0131650 -0.0115210 -0.0185490 -0.0156510 0.5204200 0.5235700 -0.0188120 -0.0189210 -0.0174390 0.5111800 0.5111800 -0.6964300 -0.5592900 -0.5556000 -0.5556000 -0.5700600 0.5155400 0.5155400 -0.8580100 0.3573500 -0.5572100 -0.5572100 0.5089200 0.5007600 0.5007600 0.5059600 0.5104800 -0.5828800 0.5471200 -0.0274270 -0.0274270 -0.0079338 0.2897100 0.3048400 0.5057900 -0.0137250 -0.5904200 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.509 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 0.127 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.509 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 0.127 8.03801689 13.93708686 5.90258012 9.39064189 1.16182320 10.98368104 0.49886356 NA 9.46175404 5.42169122 -0.08604789 5.83275839 3.82078145 10.27693523 9.60214599 1.91391382 6.90824849 8.43745747 9.10618838 13.52324753 9.28182365 6.02242108 9.53960454 1.49886356 8.28240227 9.90470867 3.30621849 -1.08620104 10.22791227 1.23584958 13.12380585 12.09193796 6.93070423 9.27034766 9.20160789 10.46464244 -1.08620104 1.72124140 0.49886356 5.74678570 9.38658637 11.99238005 9.87317308 3.23581895 10.20157334 10.26538708 10.41970721 4.43746080 9.56853171 NA 11.08663564 -1.08620104 5.25374728 9.91858659 8.82859477 -1.08620104 9.65114302 7.85640997 10.12395816 2.72124140 14.75366532 NA 12.00218697 -1.08620104 6.40574905 3.00135189 7.46848476 10.62384099 13.8038249 6.2448129 8.5193752 14.0738458 10.4379475 11.2431314 12.5844412 11.9308780 9.1774701 9.7609529 12.7991153 8.7888769 6.4216895 9.4266361 0.4988636 6.7718763 8.7196393 9.40574863 6.62814075 8.79194655 8.22223462 7.24754306 8.68062325 6.34015988 8.55594726 10.99970002 7.08882109 -1.08620104 4.89117612 7.98827795 7.11356820 9.04060015 7.83275903 10.06554646 4.79654065 3.30621849 11.57438184 9.88687536 10.81928267 10.28947820 10.12821477 8.27583956 9.57745375 6.63499541 NA 9.15635515 3.00135189 10.73726289 4.52860257 9.82453844 9.19698393 8.20621732 14.67855992 11.21224467 9.30942974 12.00945747 10.88184231 7.78733973 -0.08604789 TCGA-LL-A6FR 50 0 NA 489 breast stage iia t2 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4434571 7.4147850 10.3153431 3.9017165 8.7409191 6.2825362 9.2882963 9.5658662 12.8952433 12.4095098 9.2839789 9.7863944 2.1240965 12.9794211 2.3167540 11.9889570 5.8866087 7.1046554 9.4498950 4.8086064 NA 8.0948299 9.7524230 10.5491736 9.6907053 6.4252763 -0.6831592 8.4382862 11.1261189 NA 8.6431823 5.7924858 NA 3.1241130 9.7833391 8.4434571 8.7884280 8.1963361 9.3153432 9.3922318 1.6386763 9.7026151 14.7824466 3.4152043 9.0189254 9.0084961 8.6296357 4.2709475 NA 8.0275594 8.4356936 NA 10.1886580 6.0309981 5.2474908 5.0716383 6.4866774 11.5425626 10.1152245 11.0476474 11.1309346 9.2882963 10.1832590 10.0076237 9.0429709 9.5467731 1.6386763 11.2976063 10.1224966 0.9017261 11.1168437 7.9461091 3.7761882 2.4866886 10.8770855 8.6917920 9.7058463 7.9129426 2.3167540 9.0783040 12.9008931 11.0106752 9.2767546 10.4356938 0.250430 1.321700 1.342700 0.552100 0.724330 -0.333530 -0.041975 0.736250 0.763890 -0.368390 0.086190 0.561700 0.017123 0.017123 0.046558 -0.417070 -0.112860 -0.312490 0.018522 0.065368 -0.356920 0.717540 -0.817290 -0.057649 -0.036539 -0.136000 1.395200 -0.422760 0.875270 0.139940 0.250430 -0.284630 -0.184960 -0.817540 -0.333290 -0.352250 -0.360920 -0.405620 0.763890 -0.376280 0.026653 0.199540 -0.387270 0.401940 0.401940 -0.353960 -0.380560 0.017123 0.017123 -0.372450 -0.417070 -0.284420 -0.284420 -0.312490 0.018522 -0.010938 -0.332020 -0.074946 -0.227970 -0.025073 -0.029006 -0.036539 -0.357040 -0.224160 -0.426530 0.000000 0.048686 -0.394300 0.000 0.000 0.000 -0.262 -0.312 0.000 -0.332 0.000 -0.228 0.000 0.000 0.000 0.000 0.045 -0.341 0.000 0.000 0.250 1.322 0.000 0.000 0.000 0.358 -0.260 -0.260 0.390 0.724 -0.734 -0.353 0.000 -0.297 0.736 0.736 0.200 0.200 -0.369 0.560 0.048 -0.354 -0.038 -0.248 0.000 0.000 0.000 -0.262 -0.312 0.000 -0.332 0.000 -0.228 0.000 0.000 0.000 0.000 0.045 -0.341 0.000 0.000 0.250 1.322 0.000 0.000 0.000 0.358 -0.260 -0.260 0.390 0.724 -0.734 -0.353 0.000 -0.297 0.736 0.736 0.200 0.200 -0.369 0.560 0.048 -0.354 -0.038 -0.248 7.1496425 14.4580616 4.1241048 9.1046554 NA 11.2202580 1.6386763 4.0716426 9.8588173 10.9502021 8.4916784 8.9533773 6.2356160 9.9588044 9.2085365 6.0849380 4.6021540 8.9333015 6.0981121 11.0753924 8.6632663 6.0582191 10.0807949 1.8652062 8.6205336 10.5347104 4.2709475 NA 10.0084963 2.1240965 13.3145496 12.8209510 7.1496425 8.9017153 10.4180719 12.6635434 3.0171915 -0.6831592 NA 6.5551581 9.7628021 11.1583171 7.1369317 6.1622423 8.1229481 9.5928771 10.1353349 5.7924858 10.2378498 0.9017261 11.2232675 0.9017261 2.3167540 10.5277527 7.0041632 1.6386763 8.9424614 6.9240833 4.6743025 12.6168192 13.7759922 -0.6831592 11.5983930 NA 7.6743046 5.2236426 8.7004571 7.5503720 11.426884 9.120884 7.091540 12.979421 9.901715 11.932382 4.808606 11.551271 8.963797 9.414785 13.453183 10.068297 8.027559 9.561116 4.901716 7.322377 8.774134 9.2385937 5.2236426 8.8086058 9.3293773 8.0032531 8.1998235 4.8403122 6.1622423 9.2839789 11.6743047 1.3167250 11.0041284 8.2909952 10.0215210 9.1208838 7.1809385 10.7324944 2.3167540 -0.6831592 8.9383467 8.7884280 10.0783039 9.5467731 10.1685018 10.9300818 9.8383532 5.3391196 3.7090700 8.9332097 2.7761882 10.1886580 7.7218942 9.7565835 6.4866774 7.9927095 14.4071960 11.0766409 9.5322858 12.0135029 11.0674597 8.9314626 2.1240965 TCGA-LL-A73Y 67 0 NA 477 breast stage ia t1c n0 mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8075469 9.7557080 11.2384455 9.3507465 9.3067038 9.4508176 9.4365073 9.4410419 10.8764025 11.5410553 10.6522887 10.3659288 1.7100846 11.9267111 3.1840263 10.7085337 6.3793784 8.7262894 10.0966810 5.8347946 NA 7.4590381 8.7422987 9.5151918 11.3917288 4.1548829 -1.4599727 9.4994525 10.2266755 2.6276302 9.2046222 10.4859845 0.5401265 5.1251386 9.4463139 9.7869155 9.4782843 9.3934846 10.2362732 12.5477279 0.8621141 6.4105395 14.7371420 9.3198943 9.3100129 10.8902854 10.8275987 4.2680975 NA 9.2475340 11.1599364 1.1251221 10.7188398 8.0851394 6.8800255 4.9324912 10.3938743 11.5869579 9.9779270 13.4235342 13.4053283 6.9367793 10.7422988 10.6761535 11.4769969 11.3250142 4.9664397 11.6097926 10.4031996 6.2055118 10.1157142 10.2130422 4.9831167 6.1326324 9.2063990 10.1617690 11.2312641 10.5954574 7.4349926 9.0705812 14.0187234 12.6637306 9.5611548 10.1142954 0.3952900 0.6282500 1.1401000 -0.0131360 0.4331100 -0.0125760 -0.0183530 0.9285800 0.4364800 -0.1230400 1.5985000 1.6556000 -0.0078863 -0.0069062 0.4854900 -0.0215100 0.4285600 0.8852600 -0.0195080 0.4439200 -0.0092666 0.0104240 -0.0049844 -0.0049844 1.5608000 0.4065000 1.1098000 0.3802800 0.4605800 0.0447340 0.3952900 0.7663800 -0.0120240 0.5011600 -0.0143660 -0.0183530 -0.0183530 0.0267950 0.4364800 0.4364800 0.4706700 -0.0202220 -0.1047300 -0.0037395 -0.8302500 -0.0044312 -0.0044312 -0.0069062 -0.0052610 0.7286700 -0.0215100 -0.0093538 -0.0070576 -0.0078863 0.0114000 -0.0039796 0.4996000 -0.0092666 -0.0147780 0.2003000 -0.0049844 -0.0049844 0.0000000 0.4065000 0.3931300 -0.0210280 0.6894300 -0.0185310 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 0.000 0.000 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.426 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.509 1.613 0.000 0.000 0.230 0.230 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 0.000 0.000 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.426 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.509 1.613 0.000 0.000 0.230 0.230 9.8744483 14.2079518 6.3919241 10.4620159 5.8050860 12.8745181 4.5401761 6.3539566 8.0539025 9.6243190 5.9748023 7.7904736 6.5625431 10.5267281 9.8116380 1.8621141 9.5274391 10.0194501 7.9281920 9.3297087 10.1941441 8.3809528 12.1256070 1.7100846 8.4304392 10.1649704 3.8255821 NA 10.7200841 4.8800243 12.7115864 12.0197026 8.6526145 10.9949883 9.1930199 10.1921236 5.5288588 2.9996032 -0.4597743 7.9768866 8.7373917 9.3017262 7.0947639 8.6447738 8.3132649 6.8755651 9.9939600 9.1298262 11.1677089 0.5401265 13.3844884 4.7689941 4.9324912 9.5224913 5.9050981 6.4105395 10.0315270 9.5324052 8.2612741 1.1251221 13.4214802 1.1251221 10.6729959 -1.4599727 9.4790195 5.8530575 8.0870692 8.7773849 13.141013 7.162227 8.405908 11.926711 10.602558 10.920636 5.834795 11.763724 9.028015 11.667041 14.159449 10.472759 9.247534 8.964341 4.154883 9.556983 10.771096 10.964341 5.679725 9.228425 9.029019 7.752063 10.004971 8.057844 6.848514 10.652289 6.476813 5.140087 7.230173 6.933479 13.320869 10.361949 7.960135 9.642807 9.688652 7.930344 11.282358 9.478284 10.179968 9.482689 12.778580 11.941455 11.188083 9.029019 NA 9.572930 7.776189 10.718840 7.425871 10.705383 10.393874 7.268096 14.195257 10.508482 11.158560 12.411984 11.058090 9.887796 2.710107 TCGA-LL-A73Z 55 1 227 137 breast stage iv t1c nx m1 female 2013 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 5 NA NA 3 6 2 2 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6939796 8.7913811 10.8510520 7.7898851 8.4600786 8.9946391 9.6385472 9.8084723 11.6038528 12.6343861 10.8084723 10.1402652 1.8769982 12.5001917 3.0469275 10.9339724 6.2693137 8.5998035 9.4420982 11.7913812 2.1989341 11.3993324 9.3517160 10.0171036 10.5890931 4.8769982 NA 10.2569158 10.8685179 -0.1229625 8.5547158 7.3074486 -0.1229625 3.8769982 9.4628975 9.3946655 9.3768419 9.8889221 9.5808996 10.5244544 5.1989223 10.1159978 14.7146486 6.8745708 9.4610189 10.3995775 9.9055928 5.5352069 3.1989184 8.4769090 12.2273828 0.4619476 10.6323009 5.6049164 6.3926952 5.3364262 10.0791199 11.8409758 10.9437580 12.0795790 12.3278207 8.5154318 10.6587656 10.4572547 11.0049904 10.3517160 4.2345473 11.2487727 10.1243302 0.4619476 10.0362367 9.1177875 4.3045987 5.4005584 10.6176201 9.8649706 9.6451803 9.5405541 4.8077310 8.3343770 13.2592823 12.2898305 9.6368843 10.0292809 -0.0113350 0.2897700 0.2897700 0.0025533 -0.0350400 -0.1329000 0.0890810 0.0070826 0.3133800 -0.1614500 -0.1353600 0.7667800 0.2440400 0.2440400 -0.0343590 -0.0343590 -0.0343590 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0355240 -0.1300500 -0.1300500 -0.1300500 0.0132130 0.0132130 0.0132130 0.8272500 0.0104240 -0.0113350 0.0000000 -0.0350400 -0.1415500 -0.1329000 0.0890810 0.0890810 -0.0183530 0.0597570 0.1111300 0.3603500 -0.0040920 -0.1603900 0.0975420 0.0975420 0.0975420 -0.0022987 -0.1196500 -0.1196500 -0.0343590 -0.0343590 -0.1402600 -0.1599900 -0.1327700 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0355240 -0.0764120 -0.1300500 -0.1300500 -0.0916840 0.0132130 0.0132130 0.5746900 0.1283000 -0.0087146 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 0.000 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 0.000 9.060631 13.266224 6.006280 10.296956 3.631884 12.228625 4.431583 3.631884 9.205671 10.349687 -1.123120 8.246179 7.408377 10.898323 9.429665 3.631884 8.290624 9.796604 9.325112 10.425336 9.256829 6.469453 11.684955 3.269317 9.462898 10.105815 5.180776 NA 10.650547 4.162395 13.093969 12.358795 8.676278 10.210710 11.219349 9.815841 4.759641 1.876998 NA 3.046928 9.137916 10.299587 8.836998 5.831193 9.068487 8.606617 10.171042 5.747361 9.668159 2.461948 11.033079 2.336426 4.964459 9.375267 7.129709 5.105816 10.036867 8.157767 7.765740 3.461961 13.893978 1.684370 10.777108 NA 8.441146 5.631884 8.198924 8.978972 10.928497 6.734976 8.036868 12.500192 10.162976 10.781631 11.791381 10.412271 8.973711 9.826093 12.834642 10.598950 8.476909 8.192146 3.631884 7.687567 11.196950 10.9035195 5.5634968 8.8180437 8.9430853 7.8965867 9.7721623 7.7003634 7.0766681 10.8084723 6.0668211 4.5208497 8.2863868 7.3634690 11.2070726 10.4156699 8.1531203 10.0299146 8.2671650 6.4990486 10.3272588 9.3768419 10.7349771 9.7051325 11.1850506 10.1744856 10.0343430 7.2693137 NA 9.7763605 6.8542762 10.6323009 4.9855186 10.6587656 10.0791199 7.2778751 14.3744113 10.7992088 10.5730942 11.9881317 11.3763437 9.3189027 0.8769589 TCGA-LL-A740 61 0 NA 441 breast stage ia t1c n0 (i-) mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 2 NA NA 2 6 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7453320 9.8607048 11.2063667 8.7412546 8.6027979 9.1782411 9.3487246 10.0928190 10.5493871 14.1956665 9.3024310 10.4446229 1.8613202 13.8076282 8.0880112 10.9906141 7.4090828 8.1508379 6.0401341 12.0694300 NA 10.4703046 1.8613202 9.0155868 11.4639269 8.7642088 3.2763627 9.2857307 11.9702911 1.8613202 8.5431552 8.0901500 0.6914448 4.9202266 10.2149681 10.0318126 9.1457055 10.1942379 9.4370804 11.4233615 -1.3086445 7.7548013 15.2224525 7.9372914 9.1218588 10.5087895 10.4739949 3.7358038 4.1176701 8.7316958 12.2255874 0.6914448 10.6597129 5.3352617 5.9675306 5.4056521 10.1155724 11.1727010 10.3827135 12.3406623 12.5212279 7.2838634 10.5552052 10.2269391 10.8497003 10.5755767 4.5242957 11.2903891 9.0664455 NA 10.3216732 9.0456554 4.0636582 4.8411529 9.7289531 9.9434802 9.7378481 9.5171599 3.6455979 9.5131800 12.8156082 12.7218146 9.3970386 9.2763687 0.00320330 0.00320330 0.00320330 0.00000000 0.00139900 -0.00851060 -0.00248160 1.19300000 -0.59030000 0.56384000 0.56384000 0.55444000 -0.00511050 -0.00511050 -0.00801220 -0.00801220 -0.00801220 0.00612130 0.37821000 -0.00815030 -0.00068082 0.00181520 -0.53215000 0.02596400 0.02596400 0.02385900 0.00946130 0.00946130 0.58025000 0.00946130 0.00320330 0.00195400 0.00000000 -0.00544650 -0.00234420 -0.00248160 -0.00248160 -0.61891000 -0.58862000 -0.60410000 0.59549000 0.57085000 0.54631000 -0.00704540 -0.00704540 -0.00704540 0.00278670 -0.00511050 -0.00511050 0.47806000 -0.00801220 -0.00801220 -0.01625400 0.00070549 0.38041000 0.93510000 -0.00469570 0.00098286 0.00181520 -0.00123510 -0.53215000 0.02596400 -0.00525670 0.02385900 0.00946130 -0.00248160 0.00960060 0.00834740 0.000 0.000 0.000 0.000 0.000 0.378 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 0.000 8.7601843 14.2546620 8.5982967 10.0724083 2.2199894 9.4278081 2.6914002 -0.3086445 9.5353271 9.1103129 -1.3086445 7.4673781 2.4987615 10.5960407 9.5155694 1.4987615 7.4362401 9.3708861 8.4176243 11.2671817 10.6232628 6.9105744 11.7912470 2.6914002 8.7960049 10.5763398 6.4529578 NA 10.8331939 2.8613401 12.3884823 12.9936166 8.5571393 10.1134709 7.9951871 9.7742204 5.9393347 2.7788604 NA 2.3918502 8.6221434 10.3594047 9.9681122 3.5493858 9.5332772 8.2819931 9.7096063 6.2688348 9.6607926 -0.3086445 9.9773863 3.3352689 5.2149679 10.4697914 6.9808719 3.2763627 9.1762290 8.1651120 5.5242957 3.0837240 13.1861367 -1.3086445 11.1431324 NA 8.0042890 7.6998348 7.9581925 9.2555557 11.375210 5.939335 8.946435 13.807628 9.903294 10.316658 12.069430 10.200686 8.689997 10.164605 13.360346 9.482569 8.731696 8.207106 NA 8.497150 12.055404 11.0992050 4.5242957 9.3638314 9.6928142 7.5679234 10.0653534 7.3848934 8.6672542 9.3024310 7.7894384 4.1832562 4.9008571 7.7393209 11.3433547 10.2536486 7.7946940 9.8650832 8.8411533 5.7358010 9.9108652 9.1457055 10.1359034 10.0390275 10.3638315 10.4575209 10.0150239 8.3171150 NA 10.6429131 4.6221456 10.6597129 7.4462935 10.8452748 10.1155724 7.0533503 13.6903931 10.2631587 10.3051956 12.5599393 11.0737600 9.4039332 -0.3086445 TCGA-LL-A7SZ 49 0 NA 594 breast stage iib t2 n1a mx female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 5 4 NA NA 1 4 1 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9031154 7.9587296 10.3554662 5.0936574 9.8276774 8.1828527 9.0563781 9.0507019 10.4345991 12.0730406 11.0224645 9.7304318 1.8008688 11.6703170 2.8008688 9.9556955 6.2068698 8.5151230 7.9465548 11.7131679 NA 12.3533543 1.4789718 10.8559483 10.9031156 7.7029511 5.2603080 11.4711795 10.9946491 -0.5209764 8.9010141 4.5664133 NA 8.9728046 8.4647912 8.8734118 8.5769812 8.3086721 8.2405004 8.8583276 4.5233424 8.2271423 14.3823133 4.5008721 9.9146195 9.0200460 8.5504117 4.0639084 NA 6.5769816 9.5096165 NA 9.9394051 7.5123723 6.2068698 5.1228052 8.0296958 11.2342541 10.1871710 10.1182900 11.3543147 7.3918390 9.9485911 9.6538749 8.9506244 9.9738048 2.6488796 10.0015308 11.6798479 -0.5209764 10.0373700 7.9907019 1.4789718 5.9383799 10.3102565 8.6004827 10.0402372 10.6835204 1.4789718 9.8872790 11.3392603 11.8471829 9.5123723 9.0258438 0.14355000 0.14355000 0.14355000 0.00000000 -0.23912000 0.01433000 0.19026000 0.73416000 -0.23178000 1.14200000 1.21090000 1.54430000 -0.00013862 0.01866300 -0.06477700 3.42190000 -0.24849000 0.23721000 0.23721000 -0.30721000 0.04287400 -0.06115200 0.32592000 -0.25733000 0.38899000 0.04443200 0.04443200 1.41650000 0.21876000 -0.02258300 0.14355000 0.15084000 0.00000000 -0.00596190 0.01964100 -0.24170000 0.03171800 0.73416000 -0.23812000 -0.25890000 -0.00124730 -0.16243000 -0.03612900 -0.17689000 -0.17689000 -0.17689000 -0.10513000 0.01866300 0.01866300 -0.06477700 -0.12169000 -0.24849000 -0.24849000 0.23721000 0.23721000 0.23721000 -0.30721000 0.04287400 -0.06115200 0.42150000 -0.11587000 -0.25733000 0.21389000 0.04443200 0.15218000 -0.06289800 -0.45158000 -0.30416000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.213 0.142 -0.028 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.142 1.142 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.213 0.142 -0.028 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.142 1.142 -0.177 -0.177 0.000 0.000 10.1811219 12.5106505 6.3118391 9.3070858 4.5233424 10.6963011 4.0025135 NA 9.5637576 8.9342765 NA 6.6185000 2.4789459 9.8862171 9.2603089 4.8712670 7.5233432 7.8276774 10.5868202 12.6429134 8.8134907 5.9867431 9.9506244 2.6488796 9.7940989 10.4468960 5.7643515 NA 11.2199949 2.0639171 13.1950185 12.7912650 6.4214640 8.9218927 9.0239137 11.2899225 3.1793837 2.4789459 NA 9.2271420 10.3197272 11.4295052 6.8798283 3.4789459 8.4931373 10.1871710 10.9951418 6.3369296 10.1802557 -0.5209764 9.5206085 3.0639171 4.1228052 9.1982184 7.1678286 10.4985400 9.4647912 9.3228703 13.7608069 2.8008688 14.2780791 1.4789718 11.4476161 NA 7.1083059 2.8008688 7.5557648 8.7872881 14.080873 6.286305 8.915661 11.670317 9.671242 11.212812 11.713168 9.142507 8.805379 9.856160 12.093199 11.214505 6.576982 8.836501 2.478946 7.592692 8.818799 9.9445157 4.6488738 7.8669667 8.8883402 7.9192787 8.4141440 8.6835203 9.5517517 11.0224645 8.3431355 1.0639171 5.7268775 8.9955159 9.8331986 10.2000484 8.1389097 10.3446825 5.2863045 9.4461756 12.0684108 8.5769812 10.6804606 10.0825757 8.6056536 8.7573987 10.3039080 5.9708030 -0.5209764 9.0629533 10.9135775 9.9394051 4.7268748 10.6902292 8.0296958 7.6030707 14.3468554 10.8734120 9.6017773 10.9892189 11.2782309 9.2085699 6.0488051 TCGA-LL-A7T0 70 0 NA 376 breast stage iib t2 n1a m0 female 2013 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.53892494 8.56964109 10.98668838 7.34784456 8.85719601 8.60844446 10.11595230 9.58210114 9.64961815 14.00365951 10.24357293 10.17707228 NA 13.73802585 3.08314527 9.10920357 4.77119892 8.60146662 8.72218046 12.53423785 3.82010746 12.65499921 5.18000460 9.69054560 10.94767134 2.91322453 -0.08681377 11.54211737 10.76847408 -1.08681377 10.00927242 6.10304017 0.49814873 4.82010746 9.56247236 9.79585930 8.91603111 8.76340294 10.04828415 10.50473856 7.63772978 11.36133253 14.43429520 7.99797148 12.14293634 10.09623128 10.97930543 4.40506656 5.70763246 7.68470585 9.67559825 NA 10.16942498 4.00067610 5.38895064 4.82010746 7.85865990 12.18730314 10.43530730 10.64156192 12.08970109 8.29259450 11.02043331 10.48212244 10.16292223 10.06993144 2.61364952 10.57543950 10.92479291 NA 10.60583172 9.09809158 4.30621849 4.77119892 11.02369954 9.19861840 10.57098123 9.56157378 1.91322453 6.55707306 11.33370286 10.52331828 9.38793610 10.59401522 0.016286 0.000000 0.021183 -0.383920 -0.272120 1.283900 0.033690 0.348920 0.286610 2.738400 0.111690 0.948540 -0.324490 0.032704 -0.703250 3.501800 -0.708540 0.324470 0.334480 -0.708090 -0.334330 -0.326810 0.309530 0.309530 0.361490 -0.313790 -0.313790 -0.308390 0.365190 -0.692240 0.016286 -0.325420 -1.063400 2.530000 0.016565 -0.352250 -0.352250 0.348920 0.286610 0.324470 -0.343770 0.011400 -1.120300 -0.342120 -0.342120 -0.342120 -0.331100 0.032704 0.032704 -0.328780 -0.714620 -0.708540 -0.708540 0.097181 0.064501 0.055258 -0.708090 -0.334330 0.034818 -0.707210 -0.691330 0.309530 0.043865 -0.313790 -0.312760 0.042590 0.704200 -0.689790 -0.334 -0.334 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 0.000 -0.119 -0.334 -0.334 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 0.000 -0.119 8.81860327 13.16247786 5.00068061 9.71573262 3.86741219 11.90261072 2.72056304 -1.08681377 9.42990109 7.13238457 1.49819980 7.50193111 3.30553283 11.18497102 9.49253221 7.18000261 6.66810352 9.25751207 6.80803360 11.36648686 11.20751533 6.61365541 10.30392261 1.72058492 6.08314102 9.60321425 3.61366130 NA 11.22269258 4.12267272 12.21228112 11.63538339 6.76496578 10.13419912 10.36648691 10.02630723 3.49817426 2.82009725 -0.08681377 2.08314527 9.76730537 9.64538374 10.10365827 3.16114599 10.39887951 9.27625587 10.02500401 5.70763246 9.98132267 NA 9.35304711 2.37264570 3.82010746 10.24809289 5.05522169 7.06803444 9.42891600 8.11043267 9.34784456 -1.08681377 13.94521890 NA 10.62531333 NA 8.79279940 4.58564161 8.54439342 8.72699738 14.450004 7.047643 9.799675 13.738026 9.507541 10.725394 12.534238 11.470441 8.293309 9.581215 12.182927 11.999850 7.684706 8.421011 3.235145 7.867413 11.103658 10.9572688 5.7461058 8.8890643 9.7996749 9.4953582 10.5430009 7.3602993 9.5579739 10.2435729 7.9328071 3.0831453 9.2192779 8.1270740 9.7516323 10.0289101 7.6101840 10.2547350 8.6880034 6.9132162 12.9244618 8.9160311 10.7289998 9.8746659 11.7269974 9.0072939 10.4972392 7.5856416 0.4981487 9.0193080 7.3767410 10.1694250 5.2351450 11.3308051 7.8586599 7.3522995 13.5645483 9.7851216 9.1986184 11.6855308 11.4816474 9.2685673 1.2351143 TCGA-LL-A8F5 61 0 NA 596 breast stage iia t2 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.07085995 8.60278162 10.56530690 6.31738005 9.52888344 8.04959156 7.82433954 10.15757760 11.72117632 12.79492466 9.71691032 9.81176129 0.06942721 11.40985836 2.52887133 13.35398683 5.95209589 8.73833686 9.33974714 2.97634530 NA 11.79289951 7.35947110 10.19611115 10.23121362 6.33623875 4.39138280 12.53603823 11.15126813 -0.93043530 8.81764468 8.35022274 NA 8.05244524 7.60861041 9.10149749 8.36636812 8.33389463 8.20130892 9.76119533 4.19873773 6.06945084 14.80873147 6.73044568 9.53705742 9.02510190 9.25680405 5.33623696 1.65443554 8.55326757 11.43932180 NA 10.02727945 4.97634072 5.97634301 5.04673114 7.36407248 11.75944986 10.75463868 12.14509815 11.95304977 8.28619779 10.12337780 9.72319265 9.90786799 9.78884066 2.75540037 11.99834033 8.28862018 0.06942721 10.50147169 8.06380545 3.31737643 4.27890659 11.17044269 9.13284696 10.41152656 9.02219301 3.31737643 7.49571675 12.04296988 11.75748360 9.44666234 9.42700395 -0.3246000 0.6412200 -0.1771500 0.7267600 1.2438000 0.0000000 0.7177400 -0.2278400 -0.3893900 -0.3932000 1.1022000 1.1040000 1.0761000 -0.3653500 -0.3863700 -0.4590600 -0.8009400 0.2609100 -0.2836800 -0.1100000 -0.1877200 0.4123000 -0.4412300 -0.4412300 0.0616600 0.2370600 0.2370600 0.0526770 0.0582340 -0.4076000 -0.3766100 -0.3934000 -0.3907300 -0.4030600 -0.3846900 -0.3580500 -0.3580500 -0.2278400 -0.3893900 -0.5998200 1.8909000 0.3873400 -0.3915100 0.1554800 0.0509700 0.3408100 0.3364300 -0.3113100 -0.3649800 -0.4016600 -0.4590600 -0.7900800 -0.3968500 -0.5437000 -0.3912900 -0.0028998 -0.0960350 -0.4153000 -0.3945200 0.5175300 -0.4412300 0.7059000 -0.0125660 -0.5239900 0.1933100 -0.4162900 0.1469800 0.6113700 0.230 -0.311 -0.397 -0.397 0.000 0.000 0.000 0.333 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.391 0.314 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 0.230 -0.311 -0.397 -0.397 0.000 0.000 0.000 0.333 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.391 0.314 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 9.13284696 13.29337816 3.06944440 9.82015885 4.11384216 10.63312483 2.23936749 2.52887133 11.13486805 8.41152666 2.76989866 8.23435857 5.86386661 10.31619248 9.82183249 5.35485411 4.35485411 8.38912408 6.84423875 10.34499445 8.94148020 7.60861041 12.05333616 NA 8.85081161 10.35022263 -0.93043530 -0.93043530 10.59790599 2.87680177 12.75529569 13.08294904 6.98831545 10.33740894 10.79567004 10.51135863 5.66936415 4.39138280 NA 3.15691431 9.68232029 10.04959143 6.97634301 1.87680177 10.07020549 8.86549141 9.57128905 5.85081192 10.63312483 0.06942721 12.57860832 3.52888383 5.00018934 10.42187054 6.85696329 9.17405056 9.08626018 7.80416136 12.39868761 8.71330815 13.74948168 0.06942721 12.32389004 0.06942721 7.58908781 5.54518381 7.63169437 8.78884066 10.795670 9.036678 8.077881 11.409858 9.558296 10.730339 2.976345 8.221737 7.720504 10.030902 12.612967 11.803738 8.553268 7.780258 2.069462 7.382335 9.291039 10.025828 3.239383 8.035236 7.608610 8.239377 9.086344 6.850812 7.949035 9.716910 12.247806 3.239383 8.483080 9.047204 11.234673 10.000189 7.680477 9.827675 4.927432 10.004617 11.025665 8.366368 10.134868 10.067337 9.245625 10.303072 10.485194 7.435774 2.654413 9.661703 10.660507 10.027279 8.660039 10.697897 7.364072 7.902342 13.829236 10.702901 9.420391 12.926364 10.826842 9.839290 4.797371 TCGA-LL-A9Q3 69 0 NA 532 breast stage iiic t3 n3a mx female 2013 NA yes infiltrating lobular carcinoma 28 white not hispanic or latino NA NA 5 1 NA NA 1 2 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2228186 8.4188165 10.6469815 6.0926197 9.2954149 8.6194306 9.9539137 9.0778505 11.6033476 9.1072398 9.1781957 10.2270844 3.6596620 13.6557103 2.1857397 10.8888639 7.4294327 7.2301233 9.9309369 13.1869030 -0.9842170 13.7184641 3.3377396 9.8768914 9.9030250 7.9700006 NA 9.9937997 12.1888569 0.6007455 7.7806762 5.0601987 NA 1.6007455 8.7283314 8.8311878 8.5913436 8.3601004 8.6487998 10.3309540 12.6680892 10.8984474 14.9623224 5.4017533 11.2530084 11.7790168 9.4721587 5.2252595 3.1857239 6.8359834 9.5703933 NA 8.9656311 4.2252595 4.8737837 4.4420677 9.0353952 11.3692270 10.8065602 10.8239642 11.6795849 8.9844712 10.1450874 9.0642912 9.5932333 9.6415133 2.8231583 10.6226722 8.8799906 -0.9842170 10.5300253 8.2228186 2.6019579 4.1032710 9.7538966 9.0367844 10.3349120 8.9859102 3.4081276 10.0444012 10.6460715 11.6049874 7.3733568 9.3354766 -0.37008000 1.11390000 1.10720000 0.00917050 0.00069327 -0.01766600 0.38287000 -0.01395300 -0.01188700 2.72530000 3.65690000 0.76121000 -0.00318590 -0.00318590 0.00110930 -0.00456950 -0.00456950 -0.00443120 -0.00619160 -0.00595220 -0.00110870 0.78408000 3.65690000 -0.02205800 -0.03737100 0.61516000 0.61516000 0.60196000 -0.00719580 -0.40074000 -0.37008000 0.00000000 -0.74775000 -0.01766600 -0.01954700 0.38287000 0.38287000 -0.01395300 0.00123530 0.00069327 0.74271000 0.73549000 -0.78069000 0.00736090 0.00736090 0.00736090 -0.05145100 -0.00318590 0.01014600 -0.00373950 -0.00456950 -0.00456950 -0.00456950 -0.00443120 0.00041593 -0.00954260 -0.00922390 -0.00110870 -0.00415460 -0.00553750 -0.77761000 -0.02205800 -0.33871000 0.61516000 0.60196000 -0.00719580 0.00805670 -0.02630400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 0.000 8.2494240 13.4515398 4.5703961 9.7698568 2.7162447 11.3298211 4.0158008 NA 9.4955846 8.0326128 NA 6.9987980 -0.9842170 10.5066553 9.5598029 3.6007693 6.9583184 7.9959441 10.1668210 12.6424261 9.7649699 6.3195854 10.1269401 1.8231787 9.2301235 9.7856423 6.2542085 0.6007455 11.0578057 2.3377396 13.2422166 12.3563500 7.4124090 9.6560494 8.8737855 10.6049874 0.6007455 1.6007455 NA 4.8984454 9.5442586 11.1039301 9.5569011 2.4752406 9.7017270 9.6979211 10.0437105 4.0601944 9.7606383 NA 10.5235991 5.4587495 7.2872673 9.7597805 7.4715427 3.2637255 9.7839888 8.4793288 12.5562957 3.6007693 13.7197620 1.0157830 11.5564168 NA 7.3995087 5.5393667 7.2825909 10.2037750 11.035430 5.835982 8.519630 13.655710 9.993800 10.933176 13.186903 12.533228 8.639869 9.077850 12.880861 10.874951 6.835983 7.780676 2.716245 6.254209 8.674016 10.705366 4.145090 8.213021 9.000223 6.666856 9.744890 7.021429 10.591344 9.178196 7.554963 8.507657 5.103267 6.513975 9.674908 9.924197 7.919686 10.491031 6.674016 4.630516 9.828447 8.591344 10.769857 10.192601 10.117124 9.309276 10.312721 7.150231 9.597005 10.455801 4.946544 8.965631 5.491539 10.744575 9.035395 6.730050 13.516522 11.019674 10.645161 12.093288 11.403553 9.183222 -0.984217 TCGA-LQ-A4E4 73 0 NA 849 breast stage iiia t3 n1a mx female 2011 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 2 NA NA 1 2 3 3 3 2 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 5.895554e-07 8.934415361 9.315978251 11.214566531 8.919633562 8.375684589 9.730168660 11.321330323 9.134577770 10.098937958 8.888089627 7.523783048 10.280551798 0.581303036 12.741244940 3.244232524 8.707112334 6.675786298 8.244233475 9.833934008 13.506452042 2.166233395 13.119053146 8.675786298 8.901572590 11.400915397 4.353859614 NA 10.231009682 10.185512888 1.803640357 7.569953556 5.696745021 NA 2.803661020 9.503109379 10.661197697 9.586893067 10.493159847 10.456249880 11.826425066 3.166233395 11.151124134 13.935196410 7.432934360 11.994720146 10.543200447 10.100904739 5.737773277 4.166233395 7.588763349 11.111024398 -0.003755892 10.671380955 4.550894510 3.166233395 4.040699591 9.460851687 12.077955877 10.205759411 10.817681450 12.904229432 8.351657036 9.760348208 10.158697408 11.342265607 10.730168745 4.724224603 11.449319375 10.741139899 NA 9.963532212 8.724226309 5.423578171 4.083766508 10.814089174 10.178700327 10.818876837 9.673144565 1.996316429 9.512991061 12.958027015 11.686740592 10.651389447 9.522805323 -0.01654400 0.02352000 0.80338000 0.01679300 -0.01151800 -0.02018300 0.07407400 -0.00046137 -0.03265800 0.01396900 0.01396900 0.01396900 0.02787300 0.02787300 -0.82800000 -0.82800000 -0.82800000 0.01582000 0.01582000 -0.01289600 0.02253800 -0.05675600 0.10507000 -0.78718000 0.86705000 0.08676400 0.08676400 0.08676400 0.10887000 -0.78229000 0.02352000 0.01791700 0.01679300 -0.02018300 -0.02018300 -0.01804000 -0.01804000 0.05306000 -0.00046137 -0.01482400 0.00689780 0.00000000 0.01396900 0.04296900 0.04296900 0.04296900 0.04296900 0.02787300 -0.82646000 -0.81862000 -0.82800000 -0.82800000 -0.82800000 0.01582000 0.01582000 0.01582000 -0.85133000 0.02253800 -0.07618900 -0.75230000 -0.79914000 0.05162500 -0.83352000 0.08676400 0.08676400 0.07364200 0.02703000 -0.78617000 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.109 0.109 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.109 0.109 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 -0.128 7.647357686 12.215020594 6.950502241 9.820469228 0.576473765 12.170451483 0.581303036 NA 9.260748564 5.724227332 -1.003755892 7.410399621 4.388623521 9.826821271 9.802855593 5.083770762 9.932207664 9.298944874 10.999472559 10.816883895 10.525165475 8.732708102 10.941018106 1.581254823 10.079785292 9.315978251 3.244232524 1.581254823 10.409405045 3.244232524 11.357153119 11.731650473 6.668731845 9.368082758 7.220307703 9.877420037 8.191062670 0.581303036 -1.003755892 4.751195896 9.183658206 8.841796104 10.457273750 5.803661020 9.680598810 8.234710632 9.552812015 4.083766508 9.622014836 -0.003755892 12.123494327 -1.003755892 5.950503408 9.647079534 6.587342486 NA 9.237097362 8.803661020 8.311455433 3.519868952 13.386474985 0.581303036 10.114598284 NA 8.217893254 4.244232524 7.607331054 8.494157963 10.790823 6.253694 8.550895 12.741245 10.382061 10.749941 13.506452 12.953408 8.156177 10.174348 12.021273 8.203320 7.588763 8.297802 1.996316 7.380010 10.860492 11.614921 7.205759 9.078455 8.787469 8.638358 11.032713 4.950501 8.418371 7.523783 9.263093 -1.003756 8.496152 8.515687 9.279394 10.461362 7.140965 8.015897 10.282864 3.083775 10.490912 9.586893 10.568533 9.883527 11.823649 9.505091 11.125911 7.888090 NA 9.904136 0.581303 10.671381 5.062394 10.634289 9.460852 7.380010 13.753071 9.445455 9.533524 11.412312 11.149541 10.569006 0.581303 TCGA-MS-A51U 44 0 NA 681 breast stage iib t2 n1 m0 female 2012 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 10.32030449 9.44052807 11.63147975 8.93613114 8.39206665 8.99336443 11.16181199 9.94608325 11.12992796 11.30670238 11.71220137 10.28394457 3.52058568 13.49968164 2.23106370 9.73180590 6.98596258 8.58862657 10.00659355 12.88481545 5.34655274 13.94632171 6.53688283 10.19925506 10.01243431 9.59155601 -0.93898423 9.57191378 7.87493095 3.38308216 7.88769829 7.75463634 1.38305450 4.27060369 9.83840504 9.77968259 10.03986014 11.85901379 9.39765624 11.12858404 9.73974973 11.27819859 15.16965370 8.14462918 10.11235857 11.33115292 11.37318174 5.10554399 0.06115406 8.59642497 11.83531900 0.06115406 10.67309659 5.56894414 6.62339137 4.52057940 9.97104269 11.89027777 10.12387037 12.93122535 12.77496574 8.29955422 10.51596303 10.53609264 11.08247667 11.28273678 5.45346819 11.47054058 10.93920057 0.06115406 10.47371955 8.38533008 4.15242682 4.52057940 10.85759493 10.64470262 10.71130389 9.34307976 3.86850899 10.29117012 13.52377974 12.22479934 10.38814088 9.59545256 -0.00105170 0.42787000 0.44122000 0.00000000 0.00000000 0.00638710 0.20855000 -0.21354000 -0.21354000 -0.00110870 -0.00110870 -0.00110870 0.19269000 0.19269000 -0.00816240 -0.00816240 -0.00816240 -0.01298900 -0.01376600 0.58824000 0.13583000 -0.01876500 0.14669000 0.16505000 0.16505000 0.30489000 -0.21750000 0.52171000 0.35871000 -0.02178400 -0.00105170 0.00110930 0.00000000 -0.00709960 0.00638710 0.20855000 0.18889000 -0.21354000 -0.21354000 -0.21354000 -0.00124730 -0.02759400 -0.00729030 -0.34939000 -0.33063000 0.23659000 0.18449000 0.19269000 0.19071000 -0.00816240 -0.00816240 -0.00816240 -0.00816240 -0.01298900 -0.01376600 -0.01376600 -0.22170000 0.13583000 -0.02095500 -0.26444000 0.14669000 0.16505000 -0.00069303 0.25308000 0.52171000 -0.24946000 -0.01381500 -0.04400900 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.428 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.428 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 0.000 9.6262517 13.9371389 8.5788191 10.7706643 5.5040928 10.6850312 3.3090743 2.2310637 8.3830778 8.9829907 -0.9389842 8.1214133 4.8940417 9.8143665 10.3084839 3.0611541 9.7856635 9.5993386 10.6772390 10.3711943 9.7681119 8.6041814 10.9721671 2.6461166 9.2875619 10.2509742 6.9740394 -0.9389842 10.6610625 3.9680447 12.5357429 12.0739488 8.4165007 9.7467745 9.1231957 10.0247683 5.3279352 NA NA 1.6461166 9.8351131 9.6347969 9.7659179 5.6610626 8.7581173 7.7753950 10.5669612 6.3279370 9.7184681 NA 11.8701138 3.3090743 4.7615885 9.1056804 5.9448936 6.2706037 9.4905565 7.3090770 8.3488622 -0.9389842 13.5333963 2.9680354 10.3915064 1.0611541 9.0849040 5.4534682 7.6195707 9.7300346 12.990352 3.584710 8.481110 13.499682 11.012405 10.494735 12.884815 12.360644 8.532825 10.324419 12.804932 10.862050 8.596425 8.143299 NA 6.470540 12.044500 11.5770958 6.8620496 8.9034999 8.7493998 7.4577543 10.3169809 7.6721743 7.3511689 11.7122014 6.7050061 4.8425113 7.6977745 6.8224344 11.5575041 10.5133909 9.4470121 8.9144593 11.7528932 6.7753956 12.8858927 10.0398601 10.2754688 10.0716778 10.9907779 10.3378557 10.9125083 8.8971999 -0.9389842 9.8963712 7.7992421 10.6730966 7.3694883 11.2247239 9.9710427 7.2851516 14.0165725 10.3528960 10.7148905 12.8435337 11.3785623 9.9483703 2.6461166 TCGA-OK-A5Q2 59 0 NA 64 breast stage ii t2 n1a mx female 2012 NA NA infiltrating lobular carcinoma 2 NA NA NA NA 2 4 NA NA 3 4 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 9.6181103 9.2699331 11.3246608 8.5727120 8.3041907 9.4881289 10.3536787 9.6809650 11.1755787 13.1467640 10.9978033 10.3599558 0.1904252 13.9479425 2.1904568 9.9881099 6.6823008 8.6209009 7.6250768 12.9199275 0.1904252 13.4437542 6.6929488 10.0352797 10.1251221 5.8722723 -0.3946005 10.3295691 8.9497818 2.0649173 8.8355063 6.7804112 -1.3944108 3.6929516 9.6395970 10.2362080 9.7392703 11.6411441 9.9115475 10.6678693 12.9070535 10.0847608 15.0023749 8.6859836 10.3532508 10.7891212 10.2770270 5.4634655 7.4352085 8.2636974 11.2470861 -1.3944108 10.6271599 6.0973390 6.5421234 4.5827667 9.9739923 11.8603669 10.5884795 11.3154312 12.5337266 8.5799004 10.8103626 10.3257301 10.7928379 10.6972518 4.4634655 11.1814977 11.6600902 -1.3944108 10.4770062 8.7615689 3.7746079 6.0973390 10.9101224 9.8045447 10.0401141 8.9285406 4.5596815 10.2325638 12.9506139 12.7214236 10.1142710 10.2712659 -0.01312700 0.73986000 0.74651000 -0.00028789 -0.00193990 0.00223960 0.00097064 -0.00512270 -0.00512270 0.00332990 0.00332990 0.00750000 0.00027728 0.00027728 0.00652620 0.00652620 0.00652620 0.00166420 0.00166420 0.00041593 0.00624810 -0.00872370 0.01251600 0.01251600 0.01251600 -0.02137300 -0.02137300 -0.02884200 0.05167200 -0.17107000 -0.01312700 -0.00180140 -0.36102000 0.00223960 0.00305220 0.00097064 0.00097064 -0.00512270 -0.00512270 -0.00512270 0.00305900 -0.00013862 0.00332990 -0.00318590 -0.00318590 -0.00318590 -0.00318590 0.00027728 0.00027728 0.00652620 0.00652620 -0.37302000 -0.37302000 0.00166420 0.00166420 0.00166420 0.00041593 -0.08612000 0.00000000 -0.36802000 0.01251600 0.01251600 0.00791750 -0.02137300 -0.02884200 0.00610900 -0.00373950 -0.00332430 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.8361069 12.3585981 6.8246546 10.2266220 5.7754114 11.7811913 6.9542138 -0.3946005 9.0638925 8.3917557 -0.3946005 7.6083007 5.5596815 10.1221708 9.7074615 4.5123786 9.8438906 9.3728426 11.8823372 10.0566969 9.7325580 6.9138253 12.3567161 2.1904568 8.3720149 10.4216695 7.5033312 NA 11.0695210 4.6715764 12.2250181 11.6401129 8.9464487 9.9035484 8.4320345 9.5243491 5.7450383 2.0649173 -1.3944108 0.9274414 9.2448267 9.9419925 9.8069973 5.9364024 10.0791155 7.9046936 10.4216695 5.8628729 9.5763107 -0.3946005 10.5647634 3.2493391 5.2779104 9.2574435 5.8458965 5.9453361 10.1378417 8.9816112 8.1904484 0.6054943 13.6195499 -0.3946005 10.3616252 0.1904252 7.8557842 6.2565371 7.6139147 8.5669354 12.975157 6.291987 8.446264 13.947943 10.299408 10.994041 12.919927 10.578107 9.142597 10.090309 13.031620 11.115508 8.263697 9.725075 2.605494 7.312845 10.925722 11.1736795 6.5123770 8.9375224 8.9296664 8.8051583 10.3653116 8.2439218 7.7577707 10.9978033 6.8769491 0.9274414 9.5523921 7.3728094 10.6450903 10.6969212 8.0913153 9.1349163 10.1814978 7.0893011 11.4325328 9.7392703 10.1909179 10.1927946 10.8103626 10.4140479 10.4192671 7.7166213 9.1885686 9.5980490 8.3553555 10.6271599 5.3197299 11.1075718 9.9739923 7.3736700 13.9891227 9.8937752 9.9240286 12.6432044 11.1204464 9.6823015 2.3059122 TCGA-OL-A5D6 71 1 1104 385 breast stage iia t2 n0 mx female 2009 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 5 NA NA 2 6 1 3 3 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 8.81714580 9.13776197 11.36474160 8.15990766 8.47872958 9.69131693 10.69934436 9.31539686 11.96800098 13.32724475 9.52161555 9.89609728 2.49520907 14.06546169 8.99288822 10.92567037 7.27896047 8.20571116 6.14431155 12.17165579 NA 10.33212888 4.28371439 9.72485811 11.02624477 8.59420702 0.03576465 9.54556128 9.83830261 1.62072715 8.54753890 7.50746167 0.03576465 5.08018010 9.84314109 10.48286945 8.73449083 10.38506741 10.16635681 10.90151949 4.16506778 9.26219846 15.67259491 8.35392223 10.24826442 10.41786981 9.98342318 5.12324819 6.11260214 8.49726586 12.68256992 -0.96409462 10.77176527 7.00733007 6.55148679 4.89376506 10.00229170 11.36810257 10.26340219 12.41177591 12.47119605 7.33499456 10.03013961 9.53113170 10.60136438 10.84635784 4.08018010 11.55443939 10.29376326 -0.96409462 10.41245426 8.79899856 5.08061929 5.65049748 10.67014351 9.61792821 9.98707098 8.88909566 4.32118492 10.15731977 12.92548030 12.86986217 9.78565566 9.80810087 -0.00221680 -0.00221680 -0.00263220 0.00507000 0.00507000 -0.00581400 0.01433000 -0.55256000 -0.00249380 0.03642400 0.03642400 0.03642400 -0.02562000 -0.02562000 -0.35897000 0.01265500 0.01265500 0.00110930 0.00624810 0.07512800 -0.53256000 -0.00470790 -0.52123000 0.01978300 0.02202400 0.00319100 0.00319100 0.00030347 0.03284500 -0.00221680 -0.00221680 -0.01050800 0.00507000 -0.00581400 -0.00581400 -0.00387790 -0.00387790 -0.55256000 -0.54623000 -0.55317000 0.04854600 0.04911400 0.03642400 -0.53561000 -0.53561000 -0.53561000 0.01363200 -0.02562000 -0.02562000 -0.35897000 -0.35897000 0.00458000 0.00458000 0.00110930 0.00624810 -0.00346270 0.07512800 0.01314300 0.00000000 -0.53226000 -0.52123000 -0.52379000 -0.53470000 0.00319100 0.00319100 0.01824300 0.00833510 0.03326700 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 0.000 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 0.000 8.8781365 13.8379491 6.4366649 9.7940095 3.6392669 11.9456793 2.8431397 -0.9640946 9.1390740 8.8953211 -0.9640946 7.8850350 6.9665239 10.4678060 9.7222867 1.3577209 8.3025727 8.9486756 9.8718366 11.5467976 10.4386650 7.1285429 11.8641211 1.3577209 6.7362260 10.7818806 8.3142356 NA 10.5956413 1.8431397 12.8483647 12.9324024 8.5175855 9.0733332 7.9576274 10.0022917 4.7637090 1.6207272 -0.9640946 4.5903745 9.1152710 10.5180900 9.5366282 3.8431397 10.6443645 9.0595405 9.6254374 6.3119099 9.6421914 -0.9640946 10.5519787 3.5593450 4.4281022 10.0771100 7.1388646 5.5115186 9.2268454 8.2057112 6.8039709 5.8431422 13.7087640 -0.9640946 10.6596677 NA 9.3037433 6.5749447 7.7431453 9.7965061 12.3467511 5.4620523 9.5226212 14.0654617 10.3315552 10.9591137 12.1716558 10.1624907 8.6523352 9.8277630 13.1443923 10.9680009 8.4972659 10.4499429 0.6207741 8.1855336 10.6343040 11.4696324 6.2837144 9.0102008 8.3349941 6.6796420 10.2732113 6.8431409 8.1624905 9.5216156 9.0044531 4.4620523 4.7906730 6.5377822 11.3369966 11.1492028 8.2549549 9.1430033 8.9928882 5.0801801 10.0779722 8.7344908 10.3503695 10.1443107 10.0944545 10.3850674 10.5622855 8.0910688 0.6207741 10.6172504 6.4536394 10.7717653 7.2206618 11.4722375 10.0022917 6.7431460 13.8929897 10.5391151 10.7526057 12.2044584 11.1478999 9.0747053 1.0357647 TCGA-OL-A5D7 70 0 NA 1780 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 4.161568e-07 9.16941746 7.44635301 11.53799454 7.59993590 9.12935695 8.94022461 8.36086464 9.85271785 12.82020109 12.08085046 9.94862056 10.11388708 2.25652763 10.98104198 -0.06537028 10.38323264 7.72901567 8.51956235 8.86829074 5.70278496 -1.06552124 10.01275079 7.40220542 10.54035271 11.00371410 5.25652763 3.68948927 12.95088601 11.31587260 -0.06537028 9.69282330 5.04312574 -1.06552124 5.10452537 8.59993590 7.82029642 8.82029642 8.40424195 8.33547924 9.85867015 2.10453795 9.53172143 14.51774157 8.07312774 9.66676742 10.28332813 9.70443783 3.74195230 6.27444991 8.36086464 8.51956235 NA 9.95280021 5.27445177 6.42645263 8.70112900 8.60702547 12.30923202 10.49014781 10.61847186 12.30023898 5.48918967 10.13243097 9.51391586 10.51391596 11.47254636 3.93460142 11.02438153 5.22000098 NA 10.43045506 10.19375474 2.43028527 5.16341822 12.41753399 9.39607941 11.84748935 9.82638371 -1.06552124 3.88879195 11.06645695 11.58160866 10.10702754 9.71349856 -0.3516800 1.0371000 0.3685400 0.1626500 0.0504480 -0.0478010 -0.2072200 0.0908650 0.0545180 -0.4763800 0.6408500 3.0347000 2.2951000 0.0518140 0.0097276 0.4510500 0.2981900 0.2915100 -0.1917400 -0.3871600 -0.3729000 -0.4216700 -0.2609500 -0.2609500 -0.2173800 0.0567980 3.6569000 -0.4364800 0.0112610 0.0660860 -0.3516800 -0.6429300 0.2062600 -0.4927700 -0.6119100 -0.2072200 -0.5864700 0.0708170 0.0545180 0.5962000 0.1252000 0.1722600 -0.4763800 0.3183500 0.5517700 0.0452820 0.0167050 0.0518140 0.0318590 0.0097276 -0.0851920 0.2236000 -0.4658900 -0.5838200 -0.2354500 2.4713000 -0.3871600 -0.4133300 -0.3961900 -0.1945000 -0.2609500 -0.2173800 -0.0908760 -0.4381000 -0.4364800 -0.0878440 -0.0265770 -0.4191500 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 0.000 9.33227470 12.39825210 -1.06552124 10.15376848 3.03557113 11.55893857 5.64884505 NA 10.22577067 6.01141513 NA 6.59281131 3.18253340 11.37780262 10.49970211 4.93460142 7.79568709 8.92328469 7.72576297 10.68405051 9.05953564 5.63504041 10.62153818 1.33788232 10.80727490 10.11450914 3.18253340 NA 11.36896762 2.25652763 12.77616437 12.91839527 5.39403046 8.05613370 10.55022963 10.51627138 2.74196308 2.10453795 -0.06537028 -0.06537028 9.87784745 10.10452498 4.76749061 2.10453795 8.16630119 8.95557988 10.56941106 0.51954190 10.14039332 1.51954190 12.45999849 3.39403390 3.32691120 10.20473179 8.89810312 7.44239450 8.93319049 8.07925809 9.59815805 2.63503461 13.85908781 1.25652763 11.19816268 NA 10.28884935 2.10453795 7.53451300 6.30092175 10.867143 12.856069 8.194343 10.981042 9.594596 11.391981 5.702785 10.003378 9.461099 10.131817 12.702474 14.194601 8.360865 8.019408 6.283327 7.798786 10.299282 11.9204420 4.7674906 7.8917023 11.1727061 8.7011290 10.8027743 8.6017117 6.2921523 9.9486206 12.5740538 0.9346297 6.8653374 10.3443144 10.5451635 11.8936964 8.0792581 10.9700865 5.5195639 7.7956871 10.8655406 8.8202964 10.7591611 11.4744858 11.5822833 12.0501314 11.1268929 7.4853471 NA 9.4796030 8.8429927 9.9528002 2.9345920 12.3940611 8.6070255 7.2383809 14.0746309 11.3033793 9.8041938 12.9622469 12.3204624 9.4123583 3.5195671 TCGA-OL-A5D8 40 0 NA 973 breast stage iib t3 n0 mx female 2009 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 2 NA NA 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 9.7332130 9.0548607 12.4394649 7.4266254 8.1856173 8.3408956 11.0514912 9.8457754 10.5849438 12.8400093 7.6686999 10.3228414 3.1185092 13.0913462 2.1856129 8.3167730 8.0638076 7.5303166 10.1147413 13.0539489 5.6210027 15.3912718 0.7262209 9.6768000 11.5988606 4.8136478 -0.2738663 9.3700420 9.6745530 -0.2738663 7.7205391 6.1937915 NA 3.5335384 9.3509812 9.7339139 6.2418859 12.5095933 9.9209426 11.0930544 2.9741071 12.7045387 14.6617192 9.9308730 10.6814688 9.1628973 10.8235595 5.4943708 6.9209423 8.2536627 9.5270856 -1.2736919 10.1001384 3.3700387 5.0837367 4.0115851 10.0848369 12.1384910 10.6807456 11.7409037 13.3147833 8.7247761 10.8951712 10.1766495 10.1840795 11.0815368 4.6088270 13.0042722 8.7290007 -0.2738663 10.7244236 8.8631768 4.3569959 4.3408969 10.1275986 10.0610177 9.6368285 9.6970106 -1.2736919 9.7664754 12.5109228 10.1429833 10.4100576 10.3026701 2.55860000 3.65690000 -0.00622860 -0.00083160 -0.00595220 -0.02096100 -0.00027724 -0.01312700 -0.01312700 0.71660000 0.71660000 1.44590000 0.01181800 0.01223700 -0.00387790 -0.00387790 -0.00387790 0.01516800 -0.00083160 0.01293400 -0.01243800 -0.00013862 -0.74629000 0.00569190 -0.00908050 0.01251600 0.01251600 0.01251600 -0.00498440 0.00763920 -0.00401620 -0.75193000 -0.00595220 -0.02096100 -0.02096100 -0.00027724 -0.00027724 -0.01312700 -0.01312700 -0.01312700 0.00000000 0.00000000 0.72489000 0.00013863 0.00013863 0.00249690 0.00249690 0.01223700 0.01223700 -0.00387790 -0.00387790 -0.76372000 0.00180300 0.01516800 0.00763920 0.00763920 0.01293400 -0.01243800 -0.00013862 -0.77960000 -0.74629000 0.00569190 0.01181800 0.01251600 0.01251600 0.00402430 0.00597000 0.01335300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 0.000 8.2865185 12.5097979 7.6027026 9.8803710 3.8554715 11.3406656 3.1185092 NA 8.7077529 7.6390751 NA 6.6977293 2.3111543 10.6639274 9.5677500 4.4266271 6.5779348 8.5559085 12.1269318 10.8412294 9.5351177 7.2653450 10.6266752 2.1856129 7.7976479 9.9958969 3.6330708 NA 11.2079852 2.4266136 11.3614504 12.0573826 6.9356389 9.7969776 9.9657843 9.5189761 5.1691273 3.6330708 1.5335633 5.5590757 9.4735396 9.8860572 8.7909284 2.5335384 10.0851116 7.7949642 9.6708979 6.0571036 9.0208066 NA 11.2059660 2.9741071 4.0481141 9.7514708 6.9618166 4.3408969 9.7902548 6.3555431 6.2807745 0.3111543 13.3224338 0.7262209 10.7644189 NA 6.3482377 5.9645904 8.0299663 8.6435579 12.7677628 4.8759324 8.6598764 13.0913462 9.8490138 9.8340567 13.0539489 12.7994905 9.2178986 10.0804352 15.1835025 8.8644576 8.2536627 8.7304063 0.7262209 7.0345250 10.5515421 11.700421 6.940505 8.474378 10.374993 8.043598 10.957719 6.974113 9.324238 7.668700 6.645049 1.896117 11.443648 6.870895 9.328885 10.447285 9.837321 9.738810 11.214779 5.083737 10.502561 6.241886 10.482742 10.512047 11.296753 9.744386 10.554322 8.193791 NA 8.940760 5.135576 10.100138 5.481073 12.327765 10.084837 6.621004 13.159967 10.360089 9.393297 12.860853 11.919711 9.956807 1.726177 TCGA-OL-A5DA 61 0 NA 1783 breast stage iia t2 n0 mx female 2009 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 2 3 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 5.548757e-07 9.7724843 8.9145890 11.9743266 7.4081514 8.4870819 8.6776383 10.6450839 9.4256815 11.1439703 9.7051743 11.4171623 10.4639378 4.4601135 13.3625186 3.3171593 8.8367933 8.3615513 8.6300399 8.8289098 13.4008026 1.9021122 14.5316533 4.9801213 9.4952574 11.0433752 4.7545615 0.3171883 9.5192401 8.4081518 1.3171304 8.3209093 6.1245122 NA 2.4326388 9.5515754 10.2094469 9.1864939 12.2362687 9.6725081 10.7854417 12.5395495 12.2715957 14.8745809 6.7309537 10.8974156 10.0164403 10.9881083 4.8196580 3.9021218 8.2459220 10.7215891 NA 10.5257979 7.3760507 5.2713547 3.2557575 9.5061580 12.1019282 10.8475634 12.1328072 12.5646890 8.7251327 10.9340122 10.6893728 10.8646943 10.6266334 3.5395435 12.4752407 13.2284242 -1.2677742 10.4421399 9.0302572 5.2004533 3.6863885 10.0524310 10.0513021 10.1261212 9.7955897 4.3171593 9.0974233 12.7237164 13.1710514 10.5229503 10.4107947 0.0151560 0.7374100 0.7620100 -0.0063781 -0.0197770 -0.0128160 0.0563590 2.3560000 3.6569000 0.6218600 0.6218600 0.6373600 0.0136210 0.0171130 0.0199110 1.4926000 -0.1392400 -0.0011201 -0.0011201 -0.1427200 0.0026243 0.0310020 -0.7208400 0.0196310 0.0196310 0.0235550 0.0235550 0.0235550 0.0445620 0.0151560 0.0151560 -0.0029204 -0.0063781 0.0633550 -0.0128160 -0.0098298 -0.0098298 -0.1360100 0.4100100 -0.1679100 0.0000000 0.0399120 0.6218600 0.0066539 0.0066539 0.0066539 0.0403150 0.0171130 0.0171130 0.0199110 1.0216000 -1.2929000 -0.7346900 -0.0011201 -0.0011201 -0.0011201 -0.1427200 0.0026243 0.0310020 -0.7141800 -0.7208400 0.0196310 0.0193930 0.0235550 0.0235550 0.0445620 0.0050697 0.0523710 0.000 0.000 0.000 -0.664 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 0.633 -0.297 0.000 0.000 0.000 -0.664 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 0.633 -0.297 8.5233573 13.1680601 8.7697417 10.1368039 2.5395559 11.8975727 0.7322258 -0.2677742 8.8832112 9.3606402 -0.2677742 7.2596717 2.3171593 9.9440829 9.6353233 2.3171593 6.9121037 9.0875456 11.7372927 10.7772716 9.5086523 7.5168291 10.3701779 1.9021122 8.4719751 10.2503559 1.9021122 -0.2677742 11.1418507 3.8196580 12.1471440 11.8898573 7.4116745 10.7420231 7.6717739 9.5909526 5.3615508 2.0541191 -0.2677742 8.2180241 9.3171571 9.3715353 10.1094051 3.5395435 8.8984581 6.7434221 9.8256122 4.5135539 9.3679127 -1.2677742 10.3988624 1.3171304 5.0897481 9.9168840 6.0355183 2.1916258 8.5917295 6.6688325 7.3505803 0.3171883 13.7238936 -1.2677742 10.2074213 -0.2677742 7.6025593 5.1584582 8.0473443 7.7955897 13.998403 5.346904 8.456708 13.362519 10.117442 10.168906 13.400803 12.311275 8.958607 10.184951 13.140524 10.601017 8.245922 12.053700 -1.267774 7.574545 11.110489 11.577293 7.120212 8.977747 9.858254 7.790186 10.762258 6.493747 5.577686 11.417162 8.429162 4.404617 8.811679 6.165321 10.447728 9.972390 7.984860 9.385039 9.725841 4.686388 12.396952 9.186494 10.558346 11.045361 10.655522 9.436963 10.367913 7.243947 NA 9.010191 4.861479 10.525798 6.008319 11.517443 9.506158 6.460115 14.138267 10.087546 9.728668 12.638897 11.988993 9.901493 NA TCGA-OL-A5RU 63 0 NA 1219 breast stage iia t1c n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 2 4 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 9.72783232 9.02739267 11.66991050 8.52708011 8.76053135 9.52623513 11.53171826 9.84087641 11.24482874 14.18559258 10.92757961 10.70112865 3.03690769 13.72989782 2.11093112 9.77411826 6.42561204 8.12660949 8.60916692 12.88660848 0.08174865 13.12032466 5.83338095 10.00952941 10.74645268 9.25046731 -1.21089678 11.99186923 10.50237436 1.37395439 8.42198317 6.49634730 NA 5.55717111 9.91181575 9.23089444 9.84494800 10.96047739 9.51520604 10.70785105 1.37395439 11.65819604 14.86222981 8.28358337 10.03394616 10.88701989 10.22673983 4.85507776 5.44719897 7.95137914 10.83201512 NA 10.24739447 5.51690710 6.75477262 4.37394744 9.60597151 11.74790298 10.60397075 11.62760087 12.84257435 8.05811460 10.20472959 10.27193685 11.20182227 10.43554651 4.64696905 11.44384754 12.00163616 1.95891690 10.29579120 8.53550207 3.81179981 6.28084128 10.42470589 9.84019680 10.66396915 8.85776613 4.69587692 10.22413713 13.65930436 12.65684568 10.14763907 9.61950307 -0.00263220 0.90890000 0.90994000 -0.00027724 -0.00027724 0.00055459 0.00000000 0.00360760 -0.03526800 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00304750 0.01684500 -0.00180140 -0.04292400 0.00722170 -0.00805450 -0.00968060 -0.00968060 -0.00968060 -0.01766600 -0.01766600 -0.01766600 -0.00636680 -0.00263220 -0.00263220 0.00555290 -0.00027724 0.00055459 0.00166420 0.00000000 0.00000000 0.00360760 -0.03526800 -0.05023500 0.00124810 0.00124810 0.01098200 -0.00774950 -0.00774950 0.00110930 -0.01271300 0.00000000 0.00000000 -0.00932230 -0.00304750 -0.00304750 -0.00304750 -0.42462000 -0.00180140 -0.00180140 -0.04292400 0.00722170 0.00374650 0.00041593 -0.00622860 -0.00968060 -0.00329400 -0.01766600 -0.01766600 -0.01262900 0.00402430 0.00685780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1410313 12.0155505 6.4183451 9.5211552 6.3588428 11.1055522 7.3320195 1.7889780 8.9195585 6.5032326 -1.2108968 6.8057955 3.1109144 10.0516700 9.9137553 1.3739544 9.3387725 8.8577661 10.9380998 11.1718820 10.2000433 7.4219832 10.5797436 0.7890197 10.3262062 10.3012345 6.4183451 -1.2108968 10.8089260 3.4894273 12.4435120 12.4577620 7.6716309 10.0273925 7.9105216 9.4605288 3.1109144 0.7890197 -1.2108968 5.0743898 9.6043711 10.2422584 10.1882658 5.3739509 9.2643767 7.5703476 10.4337453 5.5571711 9.7641192 -1.2108968 12.9589911 3.4328392 4.3125490 9.1882872 6.7289191 8.0392865 9.3426172 8.3435766 10.2863407 1.7889780 13.5494479 0.3739544 10.9516939 0.3739544 8.2110526 5.5703476 7.4578725 9.5472109 11.9908667 4.8975115 8.7547719 13.7298978 10.3344350 11.3051803 12.8866085 11.4064552 9.1152825 10.3007405 13.3833707 10.9579733 7.9513791 8.8030084 0.7890197 7.0651123 11.5200946 11.174850 7.128838 8.936193 8.845626 7.400013 10.025708 8.746090 9.117663 10.927580 7.189867 4.146541 4.110914 6.931810 9.805796 10.940956 7.308624 9.034540 10.990499 8.266746 12.830217 9.844948 10.407373 10.333469 10.685699 9.568707 10.339735 8.473737 -1.210897 10.016327 9.543040 10.247394 5.373951 11.554545 9.605972 7.177005 13.557015 10.379575 10.782280 12.437907 10.580965 9.545544 1.788978 TCGA-OL-A5RV 43 0 NA 1062 breast stage iiic t2 n3 mx female 2011 NA yes infiltrating ductal carcinoma 20 black or african american NA NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 10.2996121 9.1869180 11.9213512 9.3293887 8.1734298 8.9347889 11.4590459 10.1214258 10.8450374 13.2488241 11.7265986 10.4861555 1.3237736 13.8198690 2.6457017 9.4147588 7.6576650 8.5413181 9.1018412 12.7438121 4.6695371 12.9964105 7.0425820 9.6282676 10.5140004 6.7103450 -0.2611889 8.5525830 9.5429328 2.8262739 9.5921113 7.4496084 -1.2611889 4.0242044 10.2711576 10.4819531 10.0522516 11.7777207 10.3039038 11.5728776 8.6456923 11.6652830 15.1153680 9.2832252 10.5509750 11.2326572 11.0542343 5.9286261 6.5905511 8.6591546 12.0767023 NA 10.6068526 5.1138422 5.1481939 3.2623580 9.9985450 11.9398535 10.4134353 13.9108775 12.8753123 8.2604021 10.6434363 10.3994216 11.0047097 11.2448613 5.3387132 11.8287487 12.0695786 0.3237736 10.5053306 8.4461607 4.6969508 4.9676205 10.8437280 10.0864230 10.4658712 9.1018412 3.6456901 10.4836355 13.8273415 13.1839459 10.5433361 9.9634064 -0.0129890 0.7561300 0.7629300 -0.0103700 -0.0132640 -0.0117530 0.0074600 -0.0102320 -0.0306280 -0.0111700 -0.0111700 -0.0285290 0.0196430 0.0196430 0.0041632 0.0041632 0.0041632 0.1556200 0.1556200 -0.0135400 -0.0066432 0.1754300 -0.0522340 -0.0522340 -0.0041546 -0.0069981 -0.0069981 0.0659420 0.0216030 -0.0129890 -0.0129890 0.0000000 -0.0103700 -0.0099565 -0.0117530 0.0016642 0.0202030 -0.0102320 -0.0306280 -0.0306280 0.1631000 0.1712100 -0.0036011 -0.0089906 -0.0089906 -0.0089906 -0.0089906 0.0196430 0.0196430 0.0041632 0.0041632 0.0041632 0.1111100 0.1556200 0.1556200 0.1556200 -0.0135400 -0.0093932 0.1754300 -0.3569200 -0.0522340 -0.0522340 -0.0023553 -0.0477500 0.0659420 0.0216030 0.0052749 -0.1933700 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.052 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.159 0.159 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.052 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.159 0.159 0.000 0.000 0.000 0.000 0.000 0.000 8.4340302 12.5094656 8.3275163 10.0618565 3.6841230 11.2655454 4.4936922 NA 8.9807848 7.5069859 NA 7.3831625 3.7831947 9.8229457 9.9211960 1.7388111 8.5397017 9.7210823 11.8864836 11.0767023 10.0109415 7.6900867 10.7642873 3.0607219 9.8189529 10.3626831 9.3727051 -0.2611889 10.3261105 3.4936858 12.3311419 11.8523811 7.3086576 9.7117816 7.3010443 9.3871592 5.4936890 2.0607392 1.3237736 3.9087265 9.0288205 9.5413181 9.6878988 3.2623580 10.7233305 7.6091662 10.2120001 6.7217951 9.4383742 0.3237736 10.8186198 3.7388003 5.3237628 9.7889292 7.0231400 6.1051249 8.6798492 6.3237646 8.4165214 -0.2611889 13.6074796 NA 10.3209437 -1.2611889 8.6290659 5.1138422 7.7886505 8.3405725 12.640802 5.096355 8.558980 13.819869 10.288885 10.697717 12.743812 12.302713 9.147131 10.729260 13.659155 11.653000 8.659155 7.839464 NA 6.953121 11.523028 11.359709 7.407687 9.138614 9.272131 7.916221 10.746018 6.500353 8.965214 11.726599 6.526704 3.645690 8.347981 6.948937 11.816786 10.282800 8.283766 9.039154 11.672861 5.596783 12.887005 10.052252 10.036864 10.117097 11.386485 10.142879 10.621445 9.041441 2.198243 9.976328 7.173430 10.606853 5.621445 11.129479 9.998545 7.513589 13.708460 9.774288 10.122506 12.996484 11.416521 9.847326 1.323774 TCGA-OL-A5RW 40 0 NA 1106 breast stage iia t1c n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 4 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.918809e-06 9.710324e-07 8.889149825 8.426466886 10.801734707 5.949021261 9.191382026 8.415897647 9.951218845 9.848857164 12.235175187 10.450486285 11.206792406 9.455655386 0.006477564 12.183459034 2.328434383 11.611059988 6.568749625 7.215960042 9.563012801 2.176418524 NA 8.687745190 9.338543416 10.330591675 10.867981458 7.056354838 2.176418524 10.284956279 11.915087060 3.254427755 9.501362311 7.156254015 NA 3.761391663 8.821890031 9.549538648 8.240126347 9.201263584 7.510332185 5.774692194 -0.993378820 6.398824053 13.483506061 5.613098426 9.178934195 8.405250406 8.742908624 4.398822343 2.176418524 8.973732949 10.670064888 NA 10.021921896 7.407385895 5.176430492 5.115033243 7.526143167 11.992882163 10.496354788 11.174865527 11.591469285 8.375013358 11.763271551 9.577311179 10.432771544 10.115031292 1.591487938 12.016160461 10.090650749 5.028874101 9.926115091 8.413774730 5.415897225 3.530070742 8.220825699 8.486287196 10.736976950 8.120248766 1.813853004 9.999445076 13.419936378 10.739098248 9.021921896 10.035794065 0.312570 1.206900 0.670670 -0.568030 2.487500 -0.748980 0.266080 1.046000 0.202440 -0.464720 0.017544 2.436700 1.172900 -0.713640 0.209620 0.340960 -0.679940 0.301740 0.199990 -0.611240 0.268910 2.495600 -0.709080 0.011121 -0.148110 1.147000 1.285900 0.020343 -0.123950 0.338200 -0.723050 0.036512 -0.629410 0.262630 -0.769370 -0.105260 -0.023977 0.543300 0.202440 0.143700 0.545240 -1.292900 -0.644270 1.185700 1.252400 -0.594110 -0.491400 -0.713640 -0.729410 0.078870 0.340960 -0.675180 -0.649030 0.268600 -0.662720 0.366900 -0.649640 0.179080 0.152780 -0.722190 -0.709080 -0.112210 -1.006600 -0.763900 0.044857 -0.755180 0.377590 -0.769030 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.131 -0.131 0.178 0.000 0.445 0.445 -0.512 -0.512 1.201 0.730 -0.184 -0.184 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.131 -0.131 0.178 0.000 0.445 0.445 -0.512 -0.512 1.201 0.730 -0.184 -0.184 7.522206441 14.244239579 5.561096974 8.671842842 0.591487938 10.420134660 1.591487938 6.415897225 11.293064533 11.502861284 4.254435314 7.514301402 5.561096974 10.676277635 9.859816310 7.319389424 4.734427827 8.109794619 6.983787124 10.614299427 9.216581454 6.206178242 10.517765237 1.006477564 8.713865902 9.421191945 3.960706305 NA 9.711274975 2.913396884 12.569345426 13.120818484 6.125448601 9.944616171 11.518753413 10.495351095 4.006504493 0.006477564 1.328434383 6.720751806 9.499361387 11.186104890 8.777996284 9.161324901 10.353707360 8.962156543 10.589589543 4.006504493 9.932061171 NA 12.186726760 1.591487938 3.465935296 10.768490121 7.245389176 3.006513469 8.484265038 6.235324979 6.813861980 11.520974302 13.426269499 -0.993378820 11.130304843 7.845710829 5.693007373 2.465948352 7.907373818 7.998028473 12.273245 9.980204 6.919396 12.183459 9.912646 11.635408 2.176419 10.389671 8.382828 10.008619 13.730648 13.306502 8.973733 8.153712 5.449449 8.101904 8.970848 9.773863670 3.465935296 8.203723373 9.429622659 3.093965750 8.373375462 6.050899973 6.537887749 11.206792406 12.464015925 4.889152259 9.826685759 8.436687393 9.430673121 9.359653597 8.985217203 11.069901839 2.913396884 4.561093918 11.706328644 8.240126347 11.507597544 10.241324196 10.996965319 10.420663452 9.869144078 5.650362478 0.006477564 9.266073448 4.983787124 10.021921896 5.851996339 10.974093318 7.526143167 8.067202543 13.640864084 11.512070259 10.715590633 11.769304047 10.724183240 8.547603289 0.591487938 TCGA-OL-A5RX 51 0 NA 878 breast stage ia t1c n0 mx female 2011 NA no infiltrating ductal carcinoma NA black or african american NA NA NA 2 6 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 10.332216 8.729534 11.615918 8.683776 8.740751 9.020448 10.647734 9.246779 11.708087 12.674210 11.088699 10.268254 5.716810 13.612678 2.535481 9.771154 6.903052 8.416377 10.216468 12.326528 3.857414 13.791648 6.350177 10.034712 10.171588 5.496309 NA 9.454344 8.835343 2.428571 9.711832 7.421613 1.050049 3.251689 9.716811 9.911762 10.088973 10.620669 9.755341 10.855798 9.953334 11.468118 15.221043 8.562012 10.398340 10.446231 10.890832 5.670639 3.586104 8.185507 11.549502 -1.271949 10.475480 4.750494 5.456047 4.994915 9.826816 12.111695 10.950015 13.055749 12.871988 8.243826 10.717875 10.646721 11.129806 10.795897 4.728127 11.372658 12.051603 4.120443 10.462412 8.806277 4.013525 4.483016 10.921343 10.088973 10.397897 8.556263 3.937580 10.039307 13.522339 13.050054 10.137517 9.946084 0.00597000 0.96247000 0.96821000 -0.01422800 -0.01829400 -0.00027724 0.01419000 0.00000000 -0.01009400 -0.01638400 -0.01638400 -0.01638400 -0.01078400 -0.01078400 0.00291330 0.00291330 0.00291330 0.00666530 0.00041593 0.00763920 0.01894300 0.00847430 0.00083195 0.00083195 0.00083195 -0.00940460 -0.00940460 -0.00940460 0.02711100 0.00597000 0.00597000 -0.01395300 -0.01829400 -0.00027724 -0.00387790 0.01419000 0.01419000 0.00000000 -0.01009400 -0.01009400 0.43378000 0.43119000 -0.01638400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 0.00291330 0.00291330 0.00416320 0.00416320 0.00041593 0.00041593 0.00041593 -0.00263220 0.01782400 0.00847430 -0.49566000 0.00083195 0.00083195 0.01239200 -0.00940460 -0.00940460 0.02315700 0.00597000 0.02174400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 8.7779746 12.8452822 7.8804113 10.2359208 4.5094868 11.3972327 5.2199778 2.5354807 9.4526401 8.6440055 0.7281382 8.0296224 4.3428392 9.6953524 9.8631942 3.2516888 8.4440881 9.2750206 10.1663982 10.4458026 9.5445178 7.0545555 11.1241957 0.7281382 10.1549150 10.4389326 7.7196482 -1.2719489 10.4775767 4.3130862 13.1768878 12.1357923 7.2865467 10.4687502 7.6618166 9.4224841 4.1875540 3.6823261 -0.2719489 6.1957315 9.1721057 10.0250424 10.0164155 3.6350114 8.9418138 7.3428356 10.6365188 5.3574816 10.0192969 -1.2719489 10.7014648 3.0500489 4.7942131 9.9078922 6.8975502 5.7942157 9.4763191 7.0812725 8.2769479 1.3130717 14.1468682 0.3131297 10.3354565 1.3130717 9.2884589 5.5736169 7.4526399 8.8955444 12.611201 4.561014 8.758793 13.612678 10.306801 10.878825 12.326528 12.246779 9.269223 10.314497 13.508358 11.950770 8.185507 8.143868 -1.271949 7.018145 10.915478 11.4089252 7.4250933 8.8727844 9.2309581 7.2903682 10.3747659 6.8574088 7.7337509 11.0886989 6.2827159 7.8574094 10.1391075 5.7024248 11.8092767 10.5143958 8.4679067 8.8142623 10.9760537 5.8261595 11.9260861 10.0889733 10.1279381 10.0949948 11.1058790 9.5386978 10.3561160 8.3465115 -0.2719489 9.8604009 7.6939106 10.4754800 5.6823233 11.6185805 9.8268162 7.2279721 14.5037362 10.2304607 10.5282171 13.2164057 11.2946560 9.7168109 3.0500489 TCGA-OL-A5RY 52 0 NA 752 breast stage iia t1c n1 mx female 2011 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 2 4 NA NA 2 6 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 9.49426139 8.75899400 10.78172731 7.92249283 9.15566930 9.63130131 9.53843922 10.48197426 11.36250687 13.24820444 10.43918594 10.34903934 0.02772026 17.02049715 2.61263558 10.34621774 3.55123299 8.61075763 7.28034022 10.68454666 -0.97227974 10.25288241 7.64238461 9.56618403 9.29563212 6.31307712 0.02772026 11.25916919 10.39836234 1.61263558 8.45393976 8.61451477 -0.97227974 6.06109789 9.46126047 10.22673381 8.91184555 9.53745003 9.41029891 9.78005562 10.79420383 7.75559532 14.92738590 6.24645559 9.39399723 9.73417105 9.82046524 4.72811643 5.43706457 8.29446131 11.84984742 -0.97227974 11.06899185 6.63500557 7.29446177 5.23712772 10.03890226 11.51576616 10.62339868 11.66656333 12.37141587 8.06659405 10.79544561 10.17504524 10.56683380 10.03400107 3.61263558 11.52527732 8.90725814 NA 10.86333065 9.07206908 2.34383417 7.51952775 10.65566470 9.81802352 9.80410794 8.63500521 3.11513315 7.51952775 13.01253840 12.94541997 9.03470214 9.67423359 -0.0098405 0.0707490 0.0707490 -0.1314300 0.0043021 0.0055912 -0.0440090 0.0183000 0.0183000 -0.1304400 -0.0020784 -0.0020784 0.0112610 0.0112610 0.0493980 0.0493980 0.0493980 -0.0442800 -0.0442800 -0.0018895 0.0019418 -0.0503700 -0.1480800 3.6569000 0.0037465 -0.1292700 -0.1292700 -0.1292700 0.0051359 -0.0092666 -0.0098405 0.0171240 -0.1314300 0.0060279 0.0055912 -0.0440090 -0.0440090 0.0183000 0.0183000 0.0183000 -0.0070576 -0.1703100 -0.1665000 -0.0834650 -0.0834650 -0.0834650 -0.0834650 0.0112610 0.0112610 0.0125990 0.0493980 -0.1049600 -0.1049600 -0.0442800 -0.0442800 -0.0442800 0.0079175 0.0000000 -0.0503700 0.0139110 -0.1480800 0.0037465 -0.0357210 0.0038640 -0.1292700 0.0051359 0.0129340 0.0088920 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 0.000 10.2932900 13.8057007 6.8856561 10.4486878 6.2075845 11.2193511 7.4156919 3.8350347 10.1263651 9.0177789 NA 8.1621012 4.6126356 11.0863432 9.6849935 1.8350347 9.8941811 9.4962990 10.0099555 9.8114917 9.5273515 6.1257069 11.1569580 3.1975981 7.3450876 10.5089698 5.8478541 NA 10.6952300 4.4539389 13.2249685 12.6108753 9.0332994 10.5003658 9.4983339 9.4570816 3.1151331 2.4871004 0.6126828 5.9224928 8.8139447 10.5755335 8.4993500 5.8478541 9.7974054 8.1151378 10.0500428 5.3130789 9.9164183 9.8542234 10.2291863 3.1151331 4.4871068 9.6131165 5.6277352 9.3641815 10.4205290 9.3314558 11.2032245 2.6126356 14.1326831 NA 11.0621301 NA 9.1569580 5.7281137 7.9011191 9.4993502 11.4837881 6.6126371 8.8414562 17.0204971 10.1388106 10.7492015 10.6845467 8.8903123 9.3061244 10.3445222 13.2325517 11.2471460 8.2944613 8.2100693 0.6126828 7.8478541 10.3263104 11.067965 4.809034 9.076148 8.521531 7.612638 9.634709 9.168505 8.451841 10.439186 6.027676 2.835035 7.931557 8.048655 11.620132 10.849449 7.555152 9.517523 8.109824 8.072069 10.581194 8.911846 10.603687 9.804930 10.784648 10.239563 9.655209 7.623865 4.755598 9.625038 9.998500 11.068992 7.141417 11.003165 10.038902 6.535470 14.400506 10.395090 10.566834 11.969823 11.446055 9.014939 4.612636 TCGA-OL-A5RZ 57 0 NA 679 breast stage ia t1b n0 mx female 2012 NA no infiltrating ductal carcinoma NA black or african american NA NA NA 1 1 NA NA 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.392901e-06 9.710324e-07 9.11098226 8.96799655 11.01118434 7.13086396 8.34571438 8.96060930 10.60173755 10.87518176 10.00867932 14.28962978 8.62902105 11.24198011 0.03280615 17.72785573 2.03284140 7.96060959 6.10964681 8.72282938 3.20276249 12.72435683 -0.43109233 12.35349094 3.78771454 9.43001403 11.54359554 5.93972260 0.03280615 8.10964681 11.32227396 NA 9.01867339 4.52468431 NA 2.49226340 9.45804728 13.43324391 8.15953585 9.28903997 9.18638343 11.16147022 14.78672712 11.13086345 13.65494042 6.93309457 10.61026026 9.06487719 9.34117053 6.36374755 4.98702975 7.86255430 9.09892059 -0.96719385 10.66537225 3.49226340 3.93972495 4.20275465 9.24471965 12.30939202 10.20338239 9.58165328 12.23081592 5.20275465 10.87203518 10.01154190 10.48713067 10.30254251 3.73326756 11.26104881 12.00023780 0.61776865 9.99065895 8.05242187 4.00000000 2.84018121 10.52167571 8.44645930 9.14787497 9.00581119 0.03280615 6.29021980 11.91509233 9.86888180 9.97387900 9.91318024 -0.8914100 0.0288050 0.0288050 0.0202450 0.0028169 0.0275400 -0.0431540 3.6569000 -0.4506800 -0.9564200 -0.9325000 1.1096000 -0.0027284 0.0035111 0.0286650 3.3581000 -0.4394800 -0.0846200 0.0132560 -0.8972300 -0.4337300 -0.0344530 2.2361000 3.6569000 1.4391000 0.0090737 0.0090737 0.0090737 3.6569000 0.9645900 3.6569000 -0.1248200 -0.9255300 0.0217330 0.0275400 -0.4673100 -0.4673100 2.2632000 -0.4506800 0.4782600 0.5263100 0.3379700 -0.9383300 -0.5404400 -0.5004100 -0.2835500 -0.2835500 0.0035111 0.0035111 0.0286650 0.0478790 -0.9065200 -0.9473500 0.5093800 2.4495000 -0.4671400 -0.9019600 -0.4463500 -0.0344530 0.5074700 -1.2929000 -0.8641800 0.0324650 0.0090737 0.0090737 0.0209460 -0.9007400 -0.9010500 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.835 -0.835 3.657 3.657 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 -0.121 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.835 -0.835 3.657 3.657 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 -0.121 7.4716232 12.2610488 3.2027625 9.9768113 3.1100792 13.2911766 2.0328414 NA 10.0136850 7.0607370 NA 9.6757856 4.1621133 10.7628769 10.1958520 4.5246843 5.6910428 9.7462179 11.1192994 10.6553408 9.7778839 6.6766877 10.2361794 1.8402014 6.8401863 9.4422224 2.8401812 NA 9.5146308 1.6178157 12.7771397 12.0801258 8.6102601 9.0935274 6.1202939 10.5029818 2.7332676 2.2027625 -0.9671939 0.6177686 9.9716759 10.2002496 10.8845804 4.0328326 10.3138224 9.8861410 10.7280597 6.4590955 8.7297988 NA 9.9177650 2.9397155 4.0328326 10.2257283 5.3700073 2.4922634 7.8625543 6.2027566 6.8010163 2.2027625 14.0013182 0.6177686 11.8993376 NA 7.2471509 3.9397249 7.9606096 7.5681066 11.744339 7.998616 9.015825 17.727856 8.872035 10.691935 12.724357 8.959127 8.778304 10.224507 12.634834 7.212741 7.862554 9.024353 2.354762 8.600787 12.132672 11.64431733 7.85301007 7.43797257 10.30837396 7.52868617 11.70886119 6.27123703 7.81090833 8.62902105 7.26165022 1.35473424 9.66491779 8.79350154 11.03071651 10.41220971 7.03845594 10.97351205 6.42514875 5.50856493 12.17876353 8.15953585 10.01154190 10.50755136 11.54408991 9.04405854 9.96873302 7.11498016 7.74363816 8.61869530 4.45909714 10.66537225 4.20275465 11.92252546 9.24471965 7.20275661 13.87542727 11.44830910 9.25320977 11.18511621 13.21087372 8.79438272 0.03280615 TCGA-OL-A5S0 66 0 NA 620 breast stage iib t2 n1a mx female 2012 NA yes infiltrating ductal carcinoma 2 black or african american NA NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 8.01131393 8.30981056 10.11913969 5.85268306 9.21946429 7.49957247 8.67084352 9.67978778 12.70278644 11.84176509 10.46117993 9.73403739 -0.98022693 12.69265913 0.60473557 12.17840156 6.43764389 7.74089114 9.93790975 0.60473557 NA 9.94088895 8.92517877 10.29418753 9.62804667 6.55117299 1.01977307 12.16413146 12.06895975 0.01977307 8.20466699 6.01979086 NA 3.01979086 7.74771232 9.67353257 8.76294339 7.65278691 7.37293904 9.56379039 NA 4.63450034 14.85682840 5.63567895 10.40241586 9.12700898 10.13938149 4.18971388 -0.98022693 7.94163278 8.93716399 1.01977307 10.33776973 5.49552569 5.73403756 5.46273619 7.57821266 11.74664863 10.19221932 11.27334390 11.99097613 8.93716399 10.25460928 9.92221227 9.68334995 9.73317840 1.60473557 11.70497866 8.67442781 6.26771931 10.91271408 9.33267482 2.72135078 3.72023468 9.87466020 9.06281924 9.72023160 8.88397815 4.10725265 5.58964665 13.24552650 12.88194488 9.53746129 9.27835792 0.0685220 0.6412100 0.5411700 -0.3570400 0.0055529 -0.3866000 0.3592400 0.6224200 0.2280800 -0.7515000 -0.3351400 0.9583600 1.2775000 0.2367400 0.0508190 -0.3791400 -0.3762800 0.0220240 -0.3819000 -0.3300600 -0.3578300 0.0241270 -0.3771800 1.0508000 -0.3672500 -0.3921900 3.3236000 -0.3787600 0.0479780 -0.3531600 0.0685220 -0.3679300 -0.3570400 -0.4213600 -0.7660000 -0.6038100 -0.7526200 0.6224200 0.2280800 -0.5610700 0.4456200 0.0688080 -0.7515000 0.0081959 0.0134660 -0.3516800 -0.3516800 0.2367400 0.0443330 -0.3453800 -0.3791400 -0.3820000 -0.4142500 0.0220240 -0.3819000 -0.3819000 -0.3382500 -0.3661200 -0.7534000 -0.3561300 -0.3771800 -0.3672500 -0.3655600 -0.3921900 -0.3787600 -0.3609000 0.1280000 0.0262360 0.192 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.360 -0.360 -0.759 -0.366 -0.319 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 -0.247 0.110 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 0.056 0.529 0.192 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.360 -0.360 -0.759 -0.366 -0.319 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 -0.247 0.110 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 0.056 0.529 8.37734373 15.42282053 3.10725265 9.76462565 3.01979086 11.52981421 4.14907235 3.41210404 9.61970462 7.01414548 8.89015664 8.66725030 4.77468165 10.74728694 9.41425458 4.34172251 9.06691581 9.11386950 6.96815874 10.04700677 8.98462353 4.44605768 11.16221803 0.01977307 7.59722052 10.09058367 3.10725265 NA 10.15678301 4.10725265 13.07558267 12.94590251 8.47922328 9.99348926 10.71109916 11.16189889 2.18972969 3.18971388 NA 1.01977307 9.42812166 10.37844302 7.25819666 6.82069211 9.82906957 9.47614632 10.33776973 5.93865512 9.99850229 3.47921762 10.48688790 1.34170116 4.22924182 9.91022343 8.21400675 4.69221515 9.85505284 8.47100288 7.25341166 4.90243541 13.75661656 0.60473557 10.87036942 3.60475929 8.57438084 4.85268306 8.76125901 7.77801535 9.5246109 9.9070125 7.8367756 12.6926591 9.9009059 11.3479057 0.6047356 9.2486105 8.8255357 9.7519592 12.8924667 11.9947441 7.9416328 8.7219645 3.6047593 8.0027852 9.3155608 10.5345059 3.1072527 9.0338123 8.1046003 8.0669158 9.3214481 6.6851272 6.4792241 10.4611799 11.5693359 -0.9802269 8.1464964 8.5749946 10.3501486 10.2133173 7.1512368 9.7262878 3.7202347 6.0750748 10.3258535 8.7629434 10.1283163 10.0966075 10.0296205 11.4442206 9.4853582 6.2096171 NA 8.8804909 5.6345003 10.3377697 5.5433536 10.5584658 7.5782127 7.4585838 14.5707791 10.5506858 10.4110354 12.2644530 11.3445350 8.3618666 3.6047593 TCGA-OL-A66H 74 0 NA 812 breast stage ib t1c n1mi mx female 2012 NA yes mucinous carcinoma NA black or african american not hispanic or latino NA NA 2 3 NA NA 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.080784e-07 9.5797327 9.0049550 10.9872818 7.8493038 8.4830023 9.5268867 10.9633758 10.0763476 10.5938155 13.0555103 9.0634738 10.3193689 1.7381625 12.6643717 2.3231395 10.5009656 6.9329257 7.9180773 10.2592780 12.6863530 1.3231395 13.5910392 2.1976138 9.7833000 9.6015803 5.9378411 NA 10.6042340 11.3876491 1.5455236 7.4420718 6.9080935 NA 3.1975981 9.3537979 10.3008878 9.8486516 9.2239976 9.2908374 10.9124699 0.7382058 10.1560209 14.6563794 7.1015146 11.0868965 10.6600093 9.8156516 3.5455236 2.8256228 7.9353849 9.7839280 -0.2618807 10.6446832 5.1811105 6.6865355 4.7605350 10.5162455 11.6488111 10.5824818 11.3144165 12.2395080 8.2380144 10.4867805 10.4123783 10.5539519 9.9771701 3.1975981 11.2111130 11.0780183 1.5455236 10.0973688 8.8597019 3.3068018 6.4386072 10.9609633 9.6689057 10.9283017 8.9657843 2.6450560 8.5836582 11.7455461 11.7079146 9.5742187 9.4584126 0.00166420 0.00166420 -0.00170930 -0.00110870 -0.00110870 -0.00304750 -0.00401620 -0.00304750 -0.00304750 -0.00740760 -0.00740760 -0.00691950 -0.00152430 -0.00152430 -0.00069303 -0.00069303 -0.00069303 0.00041593 0.00041593 -0.00871460 0.00305220 0.00555290 0.00694350 0.00694350 0.00694350 0.00332990 0.00332990 0.00332990 0.00124810 0.00166420 0.00166420 0.00031376 -0.00110870 -0.00650500 -0.00981850 -0.00401620 -0.00401620 -0.00304750 -0.00304750 -0.00304750 0.62460000 0.63774000 -0.00871460 0.00097064 -0.58019000 -0.00106360 0.00583090 -0.00152430 -0.00152430 -0.00526100 -0.00069303 -0.00069303 -0.00069303 0.00041593 0.00041593 0.00041593 -0.00747200 0.00305220 0.00555290 0.00000000 0.00694350 0.00694350 0.00750000 0.00332990 0.00332990 0.00124810 0.00249690 0.00736090 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 0.00 8.1411804 11.9182329 3.4386122 9.2636892 3.0723116 11.3401712 2.5455236 -0.2618807 9.4754157 7.2889150 1.0601166 6.2300224 0.3230818 10.3141802 9.4070534 2.1976138 8.8189860 9.0791311 10.0067104 11.3087356 9.7778413 6.5961495 10.7342887 3.6923602 10.1044905 9.8834637 5.1975981 -1.2618807 10.8032479 3.6450560 13.0145109 12.4377408 7.8440768 10.3231309 11.6312803 9.5961493 -0.2618807 2.1976138 NA 4.6689077 9.3684355 10.1680981 10.5158346 5.1132087 5.8010241 8.6644644 10.6491857 3.7381733 9.9093451 -1.2618807 10.8453855 2.5455236 9.6397895 10.1296483 6.7770869 5.5195293 10.1017556 8.7825626 10.5527508 1.9080827 13.7223197 -1.2618807 11.5714538 NA 8.2734436 5.7381679 7.2812003 9.8414562 11.8962794 5.8361994 8.8764402 12.6643717 10.5075930 10.4901308 12.6863530 12.1163277 8.9316937 9.7416862 12.7432665 12.4856271 7.9353849 7.2850628 0.7382058 7.3080241 9.6503092 10.7542802 6.2617301 8.6806830 8.3080241 8.1539102 9.9351699 7.8123095 10.2802329 9.0634738 7.3565541 2.8256228 2.8256228 7.7353475 8.6023544 10.1342379 8.7296901 9.8355422 8.4506954 5.3380821 11.0491218 9.8486516 11.2481907 9.9949667 11.4524139 9.4017265 10.0600964 7.8414562 NA 10.2049994 6.7605363 10.6446832 4.3231322 11.0209672 10.5162455 6.5063528 13.8710295 11.0746749 10.3528782 12.5864979 9.9937871 8.9168331 -0.2618807 TCGA-OL-A66I 36 0 NA 714 breast stage iia t1c n1mi mx female 2008 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.629541e-07 3.467973e-07 9.2899684 8.4991096 10.8953047 7.6875891 9.1422337 9.4213384 8.6249179 10.6260613 11.4907656 12.3434273 10.8170387 10.2465207 -0.2608432 11.9405798 1.5465611 9.5705288 7.0199921 8.7307435 9.3232444 5.3391338 NA 9.2899684 8.0521045 9.4291234 9.8832425 8.0246239 3.2627789 12.1402291 11.1204941 1.7392000 10.5144203 6.8838798 1.0611541 5.1986513 9.2995545 9.5736926 8.6034079 9.2578748 9.0315432 9.0118514 1.0611541 6.1315380 14.9464647 7.6962366 9.5425456 9.8113541 9.6721744 4.0246211 NA 8.2390677 10.2504801 NA 10.5717161 7.0199921 8.1821649 5.4806884 10.0690179 12.0005820 10.3293407 10.6111268 12.4345586 6.7560305 11.0467070 11.1858293 10.7017561 10.5870619 3.0611541 11.0807404 10.1597081 5.1486128 10.4607480 9.8293339 2.8452291 6.8838798 9.7781406 9.5705288 10.5905802 9.7532420 3.9871480 4.6218643 12.2122931 12.8638276 9.3758462 9.3731251 -0.0616890 1.1591000 0.2540200 -0.0454990 0.0043021 0.2024400 0.0926790 0.3551200 -0.0295840 0.2372100 0.7199900 3.6569000 0.3841900 -0.2540600 0.1848000 -0.0585960 -0.0585960 -0.0024938 -0.0670970 -0.2658800 -0.2643200 -0.3445800 -0.2518900 -0.2276100 -0.2276100 -0.0729420 1.0902000 -0.0479360 0.4754700 0.3582200 -0.0027541 -0.1093300 -0.0528680 -0.2782200 0.4251900 -0.2753500 -0.2753500 0.3551200 -0.0295840 0.1783000 0.1102300 -0.5807800 0.1275600 -0.0509110 0.3906500 0.2105400 0.2386100 -0.2620900 -0.2771500 -0.4072700 -0.0585960 -0.0814720 -0.0814720 -0.0385780 -0.0198630 -0.0354480 -0.2664900 -0.2461800 -0.3445800 -0.0201380 -0.2518900 -0.2276100 0.5953300 -0.0729420 0.4131200 0.3069700 -0.0217840 -0.0441440 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.265 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.000 0.000 0.271 0.486 0.206 0.206 -0.479 0.382 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.265 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.000 0.000 0.271 0.486 0.206 0.206 -0.479 0.382 9.8620496 13.5158602 3.9486756 10.0065936 3.9091490 12.6467695 3.4396630 -0.2608432 9.2480068 8.0521045 3.9091490 8.9930691 3.4941083 10.5469789 9.4560410 2.1986513 8.5784255 10.8425094 8.1401012 8.9191306 8.8574747 6.6279643 10.3414564 2.9871571 9.2851513 10.2335771 1.5465611 -1.2608432 10.8816478 3.2627789 12.9634494 13.2134345 7.4874148 9.5784253 10.5489897 10.1175165 2.6461166 4.2627864 NA 1.0611541 9.0418606 9.8260212 6.8372533 4.5465735 8.7213880 7.1443625 9.9841800 4.6934200 9.8326391 2.0611541 11.3152334 4.9290477 5.5721105 9.8468767 7.2825241 6.2706037 9.6824690 9.0801844 8.9339783 3.7392216 13.6429152 1.3241769 11.1536425 NA 9.3603577 3.4396630 7.9041282 7.4773139 12.113034 10.163388 8.352090 11.940580 9.755333 10.573693 5.339134 8.921616 8.616521 9.761589 13.977290 12.568350 8.239068 7.575272 2.439650 7.418702 10.788049 11.155491 4.131540 8.754637 9.582357 8.626442 10.638503 9.339134 6.262783 10.817039 12.031543 1.739200 6.460322 8.608322 12.714980 12.723551 7.650374 8.706448 6.929047 7.456898 10.616763 8.603408 10.652859 10.025202 10.959298 11.535667 11.083795 7.439661 NA 10.253462 7.527124 10.571716 5.919130 11.719897 10.069018 7.487415 14.048449 11.209880 11.112631 12.158260 11.279592 8.854265 3.324177 TCGA-OL-A66J 80 0 NA 1996 breast stage i t1c n0 mx female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 1 NA NA 3 4 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 3.121176e-07 9.7388335 8.9494380 10.7119526 7.3775671 8.2951054 9.0200154 9.8158746 9.6662741 11.0631946 9.3911869 11.7519000 10.0497627 1.1720394 13.8095490 2.8500993 10.7088484 5.9161804 8.7418741 5.9998377 12.6332932 2.6574342 14.1730747 2.7569806 9.7856900 9.9107863 5.4794472 -1.1497606 8.6798129 9.5365909 3.6574457 8.2930338 7.5400885 -1.1497606 2.3095255 9.7266073 9.8330839 10.1133596 10.9864407 10.0873003 10.3054176 2.7569806 11.3154016 14.7172001 6.5181952 10.4693932 10.3702179 10.3519275 4.7080713 -1.1497606 8.1765198 10.3100342 -1.1497606 10.4601924 6.1988183 5.3578862 4.6829777 9.9242317 12.1279589 9.8394849 11.7626055 12.6247745 8.7524653 10.6900814 10.6833757 10.7793487 9.6493719 5.5239289 11.1227201 11.4648002 0.4350952 10.5613271 8.6066465 2.3432372 3.4350551 10.6582501 9.9415257 10.2631894 9.4104232 3.4350551 6.4350535 12.3916710 12.3676367 9.3519275 9.8703758 0.00206550 0.00206550 -0.05660400 -0.00926660 -0.00926660 -0.00235530 -0.30098000 0.00000000 0.00000000 3.65690000 0.58811000 0.00541390 0.00116710 0.00555290 0.00791750 2.00330000 -0.58717000 0.02567100 -0.00106270 0.00152550 0.01447000 0.00875280 0.00638710 0.00638710 0.00638710 -0.00152430 -0.00152430 -0.00152430 0.01628600 -0.60509000 0.00206550 -0.00097017 -0.00926660 -0.00235530 -0.00235530 -0.30098000 -0.30098000 0.00000000 0.00000000 -0.00340420 0.00138680 0.01377200 -0.60757000 0.00610900 0.00610900 0.00610900 0.00610900 0.00555290 0.00555290 0.00791750 -0.60690000 -0.59360000 -0.59360000 -0.00106270 -0.00106270 -0.00106270 0.00152550 0.01447000 0.00875280 -0.59439000 0.00638710 0.00638710 0.00889200 -0.00152430 -0.00152430 0.01628600 -0.00221680 0.02693500 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 0.000 8.5539940 13.7737428 8.8958500 10.4032396 2.6135081 10.7395943 2.5505313 0.4350952 8.9094347 9.5634768 NA 7.8807578 5.6049787 10.1027557 9.7041795 2.0200221 8.6798129 9.1238860 9.7734178 10.4703102 9.4008660 7.9242317 12.1525865 2.3095255 9.4265746 10.3509322 4.9998377 NA 10.4817221 4.1720154 12.3786665 11.1062990 8.4142400 10.7146634 7.9612263 9.8985772 3.9793760 2.3095255 0.4350952 2.3095255 9.4027595 9.6517987 9.6542214 7.1215532 7.4095437 7.6116416 10.8700285 4.7569806 9.7135023 -0.1499207 9.9553440 1.8500793 9.2982067 9.8295656 7.3077992 3.4350551 10.0710732 8.3298708 6.1168762 1.4350418 13.5685162 -1.1497606 10.6513946 NA 8.4957487 5.6445053 7.9896414 9.5145375 14.6247956 5.2251284 8.7002771 13.8095490 10.3853657 10.2207777 12.6332932 12.4263385 8.1854806 9.7327334 13.0109072 11.9018091 8.1765198 7.6606620 0.4350952 7.9481225 11.2199603 11.420658 4.916180 9.623229 9.233795 7.427519 10.649898 5.999838 6.435053 11.751900 7.393122 2.020022 5.926906 6.916125 9.762231 10.184364 9.561757 9.882825 9.217505 4.780830 11.832107 10.113360 10.495298 8.976795 11.358380 10.142412 9.713502 7.557449 NA 8.929362 4.098015 10.460192 6.948122 11.415430 9.924232 6.107479 13.986759 9.807918 10.020641 12.440326 11.047614 9.840903 2.309525 TCGA-OL-A66K 72 1 1275 1021 breast stage iia t2 n0 mx female 2010 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 3 2 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.774378e-07 10.2886986 9.2211746 10.9225389 7.8992463 9.1576817 9.2131373 10.3704701 9.8161213 11.1469104 8.9363358 10.9572383 9.9581403 3.4842155 13.6492091 3.0512503 9.9363358 6.7516900 8.3199087 9.2781435 12.1077519 1.5366995 14.0615330 3.1216454 10.1693031 10.0989189 3.8586077 NA 11.4296551 8.0239423 0.3142905 8.9314455 7.2877419 NA 3.4297632 9.7675547 10.2410742 10.4319272 11.0978280 10.0071902 11.0225058 4.8790686 11.9733880 14.7184277 6.8851521 9.9363298 10.8521496 10.8177786 5.6600587 1.0512329 7.9484899 10.3727269 0.3142905 10.3986495 3.4842155 5.2211733 3.9387751 9.1545374 11.7340687 10.6384646 11.9812477 12.6962776 9.0658281 10.9369460 10.7357984 11.3639058 9.7482172 3.9387751 11.3648130 11.3352640 NA 10.2030274 8.5318380 4.2582023 3.5873050 10.7893419 9.5398932 10.6180648 9.2829508 3.0512503 8.7832474 12.6716528 12.7482172 10.0841219 9.6878743 0.75471000 1.12730000 1.10110000 -0.29650000 -0.29650000 -0.28917000 0.01880300 0.00708270 0.02256300 0.02146300 0.02146300 0.02146300 0.00000000 0.00000000 -0.29945000 -0.29945000 -0.29945000 -0.31187000 -0.28727000 -0.31170000 -0.62389000 -0.31517000 0.23674000 0.23674000 0.23674000 -0.03626500 -0.03626500 -0.03626500 0.00041593 -0.30815000 -0.29296000 0.00208050 -0.29650000 -0.28917000 -0.32400000 0.01880300 0.01880300 0.00708270 0.02256300 0.02482900 0.32012000 0.31906000 0.02146300 0.01321300 0.01321300 0.01321300 0.01321300 0.00000000 0.00000000 -0.29792000 -0.29945000 -0.29945000 -0.29945000 -0.29783000 -0.28727000 -0.32321000 -0.94832000 -0.62389000 -0.31517000 -0.63642000 0.23674000 0.23674000 0.02960600 -0.03626500 -0.03626500 0.00041593 0.01516800 -0.32403000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 -0.293 0.808 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 -0.293 0.808 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 0.000 8.3440313 12.9486414 8.1660330 9.8675933 2.1887491 10.8976803 -1.2705560 0.3142905 9.1969271 7.8141300 NA 8.6747653 3.8167840 10.1059897 9.6127285 2.5366746 8.0824684 8.7461300 11.8304765 11.2927562 9.6098388 7.4469981 10.5467049 2.0512329 10.1519119 9.7784895 3.8167840 NA 10.6414624 3.7737116 12.4807610 11.6335798 7.8942284 10.6218644 7.6211053 9.6089048 5.2684793 2.0512329 -0.2707300 6.0422044 9.5834108 9.6965479 10.3812702 5.2991787 8.2785094 8.1764046 10.8048007 7.9265385 9.9399929 NA 11.4574547 1.0512329 5.1043618 10.1535823 6.7379179 3.5873050 9.6900476 7.3623165 7.0467344 NA 13.3324263 -0.2707300 10.4083618 -0.2707300 8.3857464 7.0691715 8.1825920 8.4210650 11.619453 4.252885 8.827354 13.649209 9.875056 11.004573 12.107752 12.037803 8.836539 10.071396 13.210995 12.270055 7.948490 10.170710 -1.270556 7.440128 11.412535 11.065549 7.117339 9.242062 8.362317 8.351373 10.118501 6.113025 8.415822 10.957238 7.996108 1.314290 8.084673 6.436129 9.514774 10.357767 8.828669 8.872705 10.105990 4.879069 12.547304 10.431927 9.846315 9.674765 11.180790 9.539893 10.122176 8.028529 NA 9.085289 5.660059 10.398650 10.031960 11.083554 9.154537 6.928994 13.694475 9.929607 10.058557 12.801287 10.755499 9.928994 1.729313 TCGA-OL-A66L 71 0 NA 1301 breast stage ia t1c n0 mx female 2010 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 2 NA NA 3 4 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.98771196 7.83855537 10.48504296 4.28321803 8.93689319 8.19010862 10.02567099 8.89289218 11.14755500 11.08080028 10.94386603 9.56771751 1.92565769 12.97091357 2.09558691 11.21798750 6.47256088 7.60514612 8.76644377 11.54840406 -1.07430434 13.02048579 6.88566831 10.69932015 9.23854876 7.24307875 -0.07430434 10.90972818 8.37893639 -1.07430434 9.03810526 5.46482507 NA 2.24759338 8.54588576 8.55684284 9.50968872 9.40544614 7.99980725 9.39123220 2.51063285 10.45850874 13.93010578 4.98159696 10.30612687 9.36549680 9.06009225 4.65358746 4.68055503 7.16883957 10.55091807 NA 9.79680100 6.05494830 4.31798415 4.51062652 8.67218028 11.66418037 10.77897541 12.58966861 11.73904621 9.10681809 9.88494341 9.93829035 9.53392071 9.13755424 1.51060753 10.73060353 10.23457365 -1.07430434 10.18482056 7.97551440 4.78364523 3.87986257 10.28156751 9.18893495 10.06585648 7.97005986 3.09558691 9.48695385 12.98281144 13.14104715 9.35088174 9.64334232 -0.00249380 0.56899000 0.60521000 0.00416320 -0.00110870 0.00539410 0.00194180 0.00485790 -0.60222000 0.00208050 0.00208050 0.00263570 0.00286820 0.00286820 -0.00235530 -0.00235530 0.00095013 -0.00122490 -0.00122490 0.00694350 0.00305220 0.00069327 -0.00373950 -0.00373950 -0.00373950 -0.00664320 -0.00664320 -0.00664320 -0.00443120 -0.00249380 -0.00249380 -0.00235530 0.00416320 0.00555290 0.00775260 0.00194180 0.00194180 0.00485790 -0.59380000 -0.62344000 0.00944910 0.00083195 0.00208050 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00286820 0.01894300 -0.00235530 -0.00235530 0.00220630 -0.00366280 -0.00122490 0.00166420 -0.00573520 0.00221930 0.00207430 0.00069327 -0.63537000 -0.00166290 -0.00373950 0.00597000 -0.01321900 -0.00664320 -0.00443120 0.00499690 -0.61748000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0779506 13.5800222 4.1735912 9.9829807 3.7200814 10.6996292 4.3519322 1.7330072 9.7906258 7.7711560 NA 6.6671328 6.2110687 10.1228825 9.9043763 2.9256577 8.4936217 8.5838774 11.2012084 11.9226688 9.7206502 5.6671314 10.9361939 1.5106075 9.8667134 10.1326802 6.4094809 NA 10.4850430 2.0955869 13.3289442 12.4659150 7.5329964 8.6552867 9.6165369 10.7066156 1.7330072 0.5106582 0.5106582 8.0051507 10.1265645 11.6409844 9.4754505 5.9700599 9.0159237 9.4850430 10.2638451 4.8798626 9.5641017 0.5106582 10.8411718 1.5106075 4.2832180 10.2175329 7.8285535 4.5106265 10.2688516 9.4502075 8.1901086 2.6261120 14.1693233 1.2476238 11.1335952 NA 8.2721795 4.3519322 7.3477303 9.5847698 12.69430197 4.99175311 8.00248144 12.97091357 10.18246425 10.88820039 11.54840406 10.86009390 8.83924348 9.67385866 13.78631638 11.45753463 7.16883957 9.45996864 -0.07430434 7.10059191 9.18423194 10.3403511 4.7836452 8.8798623 8.3665351 6.4725609 9.2243126 7.3602940 8.3830467 10.9438660 7.6467653 0.5106582 7.8295477 6.0895681 7.7233271 10.0754130 6.2743940 11.1974206 4.0131317 5.7070250 12.8338708 9.5096887 10.6416279 9.9000804 8.2610564 9.4792950 10.1111607 5.9590885 -1.0743043 10.0509565 6.6399108 9.7968010 4.8325559 10.7147919 8.6721803 7.6569847 14.4056671 10.7906258 9.8689133 12.3193244 10.7910125 8.6086603 3.0131228 TCGA-OL-A66N 59 0 NA 792 breast stage iiic t3 n3 mx female 2011 NA yes infiltrating lobular carcinoma 13 white not hispanic or latino NA NA 3 2 NA NA 3 4 3 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7195298 8.4944632 10.4678175 5.0720243 9.2540743 8.3550850 9.1562624 9.2908266 11.9631558 8.9886233 11.3008445 9.8397074 4.5496076 13.6044927 0.7682479 10.6129509 6.3829542 8.0628659 7.8741533 11.7515950 -0.2317521 13.1594886 6.7107596 10.6693420 10.4547456 2.7682479 -1.2317521 12.7457387 7.8126394 -0.2317521 8.9617703 5.1776348 NA 5.0720243 8.8030439 9.4210901 9.3727983 10.2142945 9.1508691 10.2991390 9.8228493 8.5884242 14.6252541 5.1749177 10.2844376 9.8845891 9.4626029 5.0350300 7.7483847 7.1776358 10.9614624 NA 10.4850645 5.8016683 5.0536457 4.4406732 8.4192966 11.7766737 11.0329808 10.6912011 11.9183096 10.0185435 10.1685909 10.0179511 9.9886233 9.2680909 1.7682479 10.4712834 12.0337136 1.3532104 10.0155792 8.1497878 3.5490777 5.0161709 10.4538699 8.3437844 10.0408749 8.3054635 4.2918098 9.2194561 12.9140180 13.3953229 9.3447293 9.9217971 -0.24828000 0.95825000 0.96015000 -0.25253000 -0.25253000 0.00217930 0.25382000 -0.00142580 -0.00142580 0.48448000 0.48448000 0.49782000 0.01080200 0.00565180 -0.00433280 -0.00433280 -0.00433280 0.02184300 0.00000000 -0.51927000 -0.25386000 0.01233600 0.00301210 0.00301210 0.00301210 -0.00861640 -0.00861640 -0.00861640 0.25663000 -0.24828000 -0.24828000 -0.00142580 -0.25253000 0.00217930 0.00037596 0.25132000 0.24424000 -0.00142580 -0.00142580 -0.00142580 0.48970000 0.48970000 0.51799000 -0.25301000 -0.25301000 -0.25301000 -0.25301000 0.00565180 0.00565180 -0.00433280 -0.00433280 -0.52023000 0.00718160 0.00000000 0.00000000 0.00000000 -0.51779000 -0.25386000 0.01233600 -0.52658000 0.00301210 0.00301210 -0.24342000 -0.00861640 -0.00861640 0.25663000 -0.24828000 0.01303300 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 0.000 8.6615465 13.7818730 7.0350311 9.9052361 5.5231322 11.8245440 5.0901717 -1.2317521 9.6485938 8.7209864 NA 6.9970643 4.7906105 10.0896095 9.6758868 2.3532104 8.1627075 9.1147587 11.5814250 11.1257971 9.9717522 6.1605633 10.5816254 1.3532104 8.8356794 10.4237757 3.3532104 NA 10.9109904 2.7682479 13.1334739 12.0149857 8.5029547 10.3966906 8.1818728 10.0845266 1.0901759 NA -0.2317521 6.0628664 9.9916434 11.1958198 9.8275895 6.1605633 9.6747599 9.5364295 10.3290555 5.4121007 10.0571111 -1.2317521 10.7819167 1.5756028 5.2760388 10.0081955 7.0737142 6.6011349 9.8904260 9.0161726 10.9026714 -0.2317521 14.5635238 1.0901759 10.7860974 NA 7.1776358 6.5496045 7.5659063 9.3304874 12.164270 5.549604 8.940672 13.604493 9.704883 11.286898 11.751595 8.318992 9.018342 9.421986 13.122012 10.733669 7.177636 9.704147 -1.231752 7.295722 9.666090 10.1610991 6.1691253 8.4157033 8.7850532 6.8871865 8.9137314 7.6478282 7.4617324 11.3008445 7.7597670 2.2276795 11.3667629 5.8924687 9.6945411 9.5231326 6.8715332 10.0285766 4.6989796 6.1080958 11.7195297 9.3727983 10.1459978 9.9988660 10.5113965 9.9135403 9.6706201 5.9874141 0.3532104 9.1909511 8.0373718 10.4850645 6.6011349 10.3020614 8.4192966 6.0901738 14.5966295 10.1014004 9.5916123 11.8570333 11.1457267 8.6432263 1.5756028 TCGA-OL-A66O 39 0 NA 528 breast stage iib t2 n1a mx female 2012 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 1 NA NA 1 1 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.5906466 7.9432198 11.0069572 5.1079347 8.8768150 8.1980747 10.3526611 9.8378591 11.0143185 13.6681262 12.7418090 10.7282119 2.1230371 12.6243807 1.5380911 10.1093572 7.8464175 7.9995581 9.1674352 12.1612742 1.5807244 14.3308181 3.4449718 10.2594470 10.3933364 9.1962901 2.2385117 10.9413570 10.1007981 1.8600093 7.9022135 5.3062622 NA 2.9975092 8.8611334 8.8130391 9.2463002 8.9163733 7.7883771 9.6034947 1.8600093 11.0633547 13.9311673 7.0962313 11.2304740 9.7291379 9.3851359 5.8234819 6.3259818 7.0138117 10.3149228 NA 10.2570395 4.0299299 3.2385117 3.2385117 8.4614062 12.1042516 10.5987745 11.5625257 12.0010920 9.2428468 10.0950636 10.0945847 10.2908774 9.4038118 1.8600093 10.9142040 11.8395748 -0.4619585 9.7572471 7.7054969 5.2105058 1.5380911 10.5110584 9.2007471 10.0178589 8.3062632 0.1230040 8.8577506 12.7104280 9.8851463 9.6628462 9.9805038 0.0201720 0.4015700 0.4015700 0.0184060 0.0142000 0.0267640 0.0236750 0.0072028 -0.8876000 0.0142990 0.0142990 0.0142990 -0.0043236 -0.0043236 0.0088611 3.6569000 -0.9330600 0.0024661 1.1015000 -0.3898700 0.0070517 -0.4077400 -0.1061600 -0.1061600 -0.1061600 -0.0915110 -0.0915110 -0.0825650 -0.1542900 -0.0569920 0.0201720 -0.0293410 0.0176060 0.0267640 0.0369040 0.0236750 0.0236750 0.0072028 -0.8876000 -0.8990300 -0.0032256 0.0109510 0.0142990 0.0073300 -0.0126780 -0.0126780 -0.0126780 -0.0043236 -0.0243490 0.0088611 -0.9450500 -0.9175700 -0.9175700 0.0024661 0.3951100 0.3951100 -0.3898700 0.0070517 -0.0145340 -0.0313890 -0.1061600 -0.1061600 0.0076083 -0.0915110 -0.0825650 -0.1542900 -0.0076408 -0.0622560 0.000 0.000 -0.866 -0.866 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4864457 13.8884999 8.0596792 9.5260532 2.7420709 10.8144939 3.8600093 -1.4619585 9.7960557 7.6439875 1.5380911 6.4980801 3.2929731 10.5594057 9.7029856 6.8509619 6.6928972 8.3534618 7.2069635 12.1301852 9.5099598 5.6041692 9.5031414 0.5380415 10.3681976 10.0675091 1.9975092 3.0616380 10.7217140 3.9643432 12.8545016 12.2384099 7.0339339 8.6400544 10.1188082 10.2803880 1.7080106 NA 0.1230040 3.2929731 10.4041984 10.1131450 9.6347938 3.8234844 7.7326382 9.3757065 10.7644908 3.1230371 9.8560565 -1.4619585 10.1823855 1.1230702 3.1819294 9.5048508 8.3517476 4.3960567 9.4184274 6.5987746 10.1211614 3.2385117 14.6342790 NA 11.5216067 -0.4619585 7.2069635 3.6673585 7.5437031 10.0601697 14.799610 7.174703 8.578368 12.624381 10.167435 10.743566 12.161274 11.000581 8.544166 9.706124 12.623053 10.612555 7.013812 9.742650 5.814202 7.037925 10.111726 10.5278279 6.1003217 8.8430002 9.1435582 8.7692997 9.7006398 5.0772387 10.1065098 12.7418090 8.8257910 0.8599695 4.2385194 8.6855888 7.4022651 8.9022132 8.8894927 10.8249251 6.2385175 4.4922762 12.8544620 9.2463002 11.2029703 7.7764830 8.2912955 8.8812642 9.9495896 5.4805915 NA 8.2355677 5.9303967 10.2570395 5.3582591 10.6773102 8.4614062 7.3227132 14.5110584 11.1850873 8.8768150 11.8088119 11.2193170 8.4922750 0.5380415 TCGA-OL-A66P 75 0 NA 428 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 4 NA NA 2 6 1 2 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7609291 8.0366676 10.1533606 5.9843478 9.2339990 9.5761241 9.4526930 9.6923332 11.4960994 12.6751384 10.5936934 10.0036847 1.1098954 14.0406150 6.3828955 11.0947708 5.5910031 8.5583381 6.5801983 11.1898068 0.5248661 9.6373547 3.1098787 10.6309938 10.1732728 6.5249146 1.1098954 13.8359006 11.0252591 0.5248661 9.0087309 6.4556527 NA 8.3921938 8.8625369 9.0756618 9.2697490 9.0890646 9.6784672 8.9986209 2.6948356 7.2322741 14.0509252 5.5386002 9.3128176 9.5610888 9.2731079 4.4318035 5.5249162 7.7147394 11.6170115 -0.4751339 10.0445514 6.1973406 7.4257815 5.5249162 8.8977801 11.2926858 10.4659627 10.8269828 12.0398757 8.1651603 9.9647460 9.2897868 9.6529095 9.0795040 2.1098620 11.5514385 7.1023442 -0.4751339 10.3354867 8.2218829 1.8468343 5.3062732 10.1220366 8.8241231 10.1359400 8.2764590 3.1098787 6.3704049 12.7430242 12.8208275 8.4674295 9.4541734 -0.00318590 -0.00318590 -0.00304750 -0.00719580 0.49147000 -0.00482630 -0.02785900 -0.01354300 -0.01138900 -0.05199100 -0.05199100 0.26263000 -0.00152430 -0.07294200 0.00471900 -0.00360110 -0.14734000 0.01530800 0.01530800 -0.00937180 -0.00069303 0.00152810 -0.07320900 -0.07320900 0.51194000 0.05651300 0.05651300 0.05651300 0.50516000 0.00850430 -0.00318590 -0.01450300 0.04533300 0.00513590 -0.00277070 -0.02785900 -0.02785900 -0.01354300 -0.01138900 -0.10026000 -0.00954260 -0.26300000 -0.26232000 -0.25636000 -0.50339000 -0.18484000 -0.18484000 -0.10954000 0.06823000 0.00471900 -0.00360110 -0.18345000 -0.18345000 0.01530800 0.00633270 0.05622800 -0.00595220 0.01502800 0.00708260 -0.33595000 -0.07320900 -0.07320900 0.00569190 0.05651300 0.05651300 -0.01312700 -0.00802440 -0.00055444 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.332 0.000 -0.262 -0.038 -0.185 -0.185 0.000 0.000 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.332 0.000 -0.262 -0.038 -0.185 -0.185 0.000 0.000 10.5220946 13.1953501 2.1098620 9.4512111 4.3322711 10.5943649 5.2798018 2.5249162 9.9385431 9.1117549 NA 6.3952805 4.0484803 10.7471062 9.4718213 3.6948356 7.8603055 8.3482824 12.7155115 14.0205203 9.8733224 6.0795040 10.8802662 2.8468343 6.1396250 10.1423825 4.7343682 NA 11.0401222 0.5248661 13.0598259 13.2194907 8.2798028 9.9118554 8.9129324 11.0455338 3.4318101 3.1098787 NA 2.3322783 10.4144191 12.1975614 9.2964046 3.9172312 8.0968574 10.9688946 10.5213886 6.9843467 10.2008721 -0.4751339 10.0396292 3.5249162 4.1098787 9.9997770 6.4989848 9.9183056 9.7952104 9.9257946 14.2144764 2.9843524 14.3499733 1.1098954 12.0828574 NA 8.1795514 5.0484760 7.5638339 10.2348605 11.520753 7.389101 9.004695 14.040615 10.119240 11.022268 11.189807 8.596378 8.455711 9.584260 13.053858 10.569992 7.714739 8.482017 2.524916 8.090969 9.371972 10.001661 3.524916 9.225355 7.796378 6.547283 9.247842 8.519269 8.367265 10.593693 7.395280 4.654201 3.772846 7.522716 8.930057 10.810317 7.873643 11.606066 3.612376 9.581553 11.323168 9.269749 10.571357 9.891237 8.971998 9.724588 9.707309 5.864766 6.048478 9.630706 10.684156 10.044551 5.674661 10.723974 8.897780 7.389101 14.326419 10.995574 10.037656 11.252836 10.994048 9.066012 5.828695 TCGA-OL-A6VO 43 0 NA 858 breast stage ia t1c n0 mx female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.41043068 8.65447492 11.44455185 8.22493792 9.23703090 7.05136558 9.38999716 10.71481063 11.90720345 12.99248328 10.86288814 10.22776863 3.59558720 12.12891099 1.88510575 8.21844651 9.04862310 7.64240194 8.09099206 5.34451962 NA 5.18054573 10.35934689 10.49687055 11.26781012 7.68068513 0.01063664 8.17384900 10.80368007 1.74760223 9.99171032 6.23301180 -1.57432586 4.12609733 8.17384900 9.90240240 9.41859455 8.14161825 9.57794104 10.69097827 1.23302906 13.75233150 15.08212301 8.43094382 9.43758231 11.18637619 10.80340901 3.33255041 NA 9.56903950 9.84139798 0.42567414 9.67713857 4.57540310 5.53417991 4.35639034 8.25696346 11.94676587 11.55284453 9.62348721 12.30188540 7.12956019 10.92076178 10.65140900 11.01273054 10.85506296 3.85191891 12.02382510 9.51709160 -1.57432586 9.86184730 9.96481505 3.50802292 3.63510428 12.32142084 9.83186125 10.55461724 10.03483500 -0.57432586 6.57031416 12.39477291 10.11957873 9.51576862 10.01577547 0.3772600 1.1861000 0.8796600 -0.1533600 0.3991200 0.1946600 0.0048579 2.8878000 -0.1179600 -0.0579240 0.8794600 1.1870000 1.4240000 -0.1899900 0.1240400 -0.0091286 -0.0091286 0.0000000 -0.2815600 0.0080567 -0.1468200 0.1342100 0.2519100 0.2519100 0.2519100 -0.2213300 -0.2213300 -0.2282900 -0.3232100 0.3307600 0.3772600 -0.2142900 -0.1533600 -0.1827000 -0.6454600 -0.3847000 -0.3976200 0.1210800 2.0558000 -0.1806800 0.2595800 0.3873300 0.1506900 1.3945000 1.3945000 0.0000000 0.0158660 -0.1899900 -0.1899900 -0.2604700 -0.0091286 -0.3207700 -0.3207700 0.0522410 -0.2815600 -0.3212400 0.0080567 -0.1300300 -0.1755000 -0.7590000 0.2519100 0.2519100 -0.1883600 -0.2213300 -0.2213300 -0.3540400 -0.0637030 -0.2080900 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.523 0.523 -0.280 -0.280 0.000 -0.208 0.293 -0.169 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 0.000 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.523 0.523 -0.280 -0.280 0.000 -0.208 0.293 -0.169 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 0.000 7.20044354 12.62494518 1.42567414 9.51112880 3.90591885 11.41540551 2.33253609 -0.57432586 10.05090840 9.65807721 4.81797621 7.48683824 0.74760223 10.65507593 9.16374854 4.94921741 7.11215694 10.10513629 5.74758343 9.93740884 9.27710859 6.28363661 10.40722357 2.33253609 9.84034143 9.58678820 2.01063664 NA 10.57381502 3.12609733 12.41336438 13.02527856 6.40293701 9.85767610 11.90037619 9.92997869 7.05501340 1.42567414 0.01063664 2.81797110 9.59495492 9.72429163 8.72486442 5.39144123 6.60427152 7.69009857 11.21518988 4.47004873 10.45321671 4.99551165 12.19632014 2.74758075 5.30829898 10.73604180 6.97193320 3.71105432 8.44385650 7.57286087 5.89326269 2.01063664 13.24093947 -1.57432586 10.95019799 5.99551165 10.07131473 3.06951314 8.07850096 7.64482463 7.779708 7.995512 8.105136 12.128911 10.064997 11.234017 5.344520 11.853755 9.400537 10.522042 13.043411 12.904679 9.569039 9.323502 5.774384 8.421423 10.850085 10.8799555 7.7632781 9.0980816 9.5530058 9.7776996 10.3912818 5.5754031 4.5341799 10.8628881 11.9984749 2.4256473 9.1788730 8.8395909 11.4618298 11.7065720 8.1838795 9.9467659 5.6830451 5.3681712 10.8511082 9.4185946 10.0394458 10.8706711 11.4388044 11.3361116 10.6363276 8.4535624 NA 9.3929113 5.4480254 9.6771386 10.2875186 11.3291239 8.2569635 8.5119519 14.0981645 11.1508094 10.3512107 14.0822487 11.6864288 9.7425035 0.7476022 TCGA-OL-A6VQ 49 0 NA 600 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.96296886 9.49640103 11.95858150 9.40906417 7.91546832 9.16180658 10.96004539 9.63665344 10.09675060 10.32066327 11.14130608 10.32294056 2.59955584 13.19590917 2.82195506 10.14774374 6.87258254 8.50645477 10.01319201 12.21304664 7.59956402 13.06121405 6.42399324 9.52239616 10.70721710 7.35445128 0.01464095 9.05352057 8.72540818 2.33654048 8.18452677 7.85380545 0.01464095 4.65845715 9.81388314 10.13224471 9.86791113 12.19326643 9.75438214 11.41334529 8.45754505 11.02162887 14.78490413 8.93260011 9.92299419 11.55230535 11.04940056 5.01460078 5.18452628 9.09940988 11.81590576 NA 10.47914738 5.71504221 5.22405571 4.33652620 10.14902788 11.82758104 10.45235369 13.23180200 12.92842597 8.34999195 10.31609776 10.06988405 11.41281084 11.13483943 4.92149346 11.15095195 12.28255868 NA 10.53128651 9.00895490 3.33652620 6.38964080 10.45858112 10.15543138 10.29188899 9.19699597 2.82195506 9.66565320 14.42657591 14.07791239 10.03835593 9.66565320 -0.00069303 0.85906000 0.87488000 0.00263570 0.00263570 -0.00032880 0.03087300 0.00069327 -0.34939000 0.00124810 0.00124810 0.00124810 0.01008300 0.01008300 0.00471900 0.00471900 0.00471900 -0.00832410 -0.00929420 0.00221930 0.00346870 0.01237600 0.00485790 0.00485790 0.00485790 -0.01009400 -0.01009400 -0.01009400 0.01502800 -0.00069303 -0.00069303 -0.00373950 0.00263570 0.01530800 -0.00032880 -0.00180140 -0.00180140 0.00069327 -0.34939000 -0.34939000 0.00000000 0.00000000 0.00124810 0.00917050 0.00917050 0.00917050 0.00917050 0.01008300 0.03228100 0.00471900 0.00471900 0.00471900 0.00471900 -0.00832410 -0.00929420 -0.00929420 0.00221930 0.00346870 0.01237600 -0.55497000 0.00485790 0.00485790 -0.51311000 -0.01009400 -0.01009400 0.01502800 -0.17348000 -0.53398000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.12834367 13.85773749 8.71504118 10.67993747 4.76949142 10.84670047 3.59956774 NA 8.51045641 8.01460134 NA 8.29917138 3.33652620 9.83478057 9.76111587 2.01460524 10.02303019 9.45131313 11.18702910 10.40154184 9.69286723 7.70808858 11.16371357 3.59956774 10.01036879 9.77282475 6.98038639 NA 10.51145539 3.92149346 12.68813150 12.15511187 8.33652977 9.90790313 8.41120632 9.30000380 4.10206178 1.01456954 1.59955584 5.47403362 8.77615269 9.37654544 9.96296886 5.50645596 8.29300439 7.28138854 10.22770582 6.03696921 9.51045661 0.01464095 11.24342024 4.47403362 4.33652620 9.71566536 5.65701398 4.92149346 9.50043082 7.42399240 7.52239635 0.01464095 13.62401121 0.01464095 10.04388881 NA 8.23860345 4.76949142 7.39830590 9.36774847 12.544381 4.715042 8.449230 13.195909 10.260154 10.649413 12.213047 12.545739 8.974604 10.600503 14.623203 12.693642 9.099410 8.610791 NA 7.658458 11.894950 11.434562 6.742522 9.792679 9.086064 7.776153 10.293237 7.214273 7.490335 11.141306 6.506454 3.336526 6.629311 5.766280 11.845117 10.619155 8.304621 8.818733 12.325214 7.143884 12.583759 9.867911 10.192021 9.653037 11.028622 10.210589 10.516439 9.642135 NA 9.541805 7.058996 10.479147 6.687027 11.174473 10.149028 8.003286 13.771158 9.989016 10.366645 12.997952 11.180765 9.567271 2.014605 TCGA-OL-A6VR 48 0 NA 1220 breast stage ia t1b n0 mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 3 NA NA 1 3 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7528703 8.7052934 11.7435565 8.5961115 8.7599747 8.8691299 11.0699066 9.4792158 8.8997774 13.0657661 8.1658718 10.1038064 1.4531751 12.7445161 2.1901091 9.6598966 6.5824371 7.9503401 9.4537795 13.3357966 5.1287182 13.8518379 5.7508343 10.1178102 11.5199902 6.4975469 NA 6.6841076 8.5663170 3.2832254 9.3062898 7.3111343 -1.7169079 2.5311444 9.6302963 9.2417813 9.6889019 11.8960971 8.9189467 10.8476162 10.6763508 11.4211803 14.4630793 7.8225230 10.6883620 11.1848497 10.2454015 4.0111467 8.0280624 8.2846367 10.7952282 NA 10.2117469 4.9556522 4.1658718 2.1901091 9.1216446 11.6566375 10.2996886 12.7194195 12.5119721 8.1719719 10.5296722 10.7044413 10.8710061 10.7331509 5.2139654 11.3061164 13.4538187 0.2832106 10.3503267 9.9234735 3.4981360 3.2374261 10.9631485 10.5353026 10.5798580 9.9884289 2.5311444 7.1474146 11.4288423 13.0553369 9.8488066 9.8756856 0.00000000 0.00000000 0.00000000 0.00194180 -0.00083160 -0.00456950 -0.02907400 -0.74238000 -0.74089000 1.54750000 1.56620000 1.76950000 0.00708260 0.00708260 -0.00263220 -0.00263220 -0.00263220 0.00708260 0.00037257 0.04840400 1.66930000 0.00861350 0.02342600 0.02342600 0.02342600 0.02693500 0.02693500 0.02693500 -0.00097017 0.02020300 0.00000000 0.00166420 0.00194180 0.03888800 -0.00456950 -0.02907400 -0.02907400 -0.74238000 -0.74089000 -0.74089000 0.00027728 0.00027728 -0.77770000 -0.00073079 -0.00073079 -0.00073079 0.04599100 0.00708260 0.00708260 -0.00263220 -0.00263220 -0.00207840 -0.00207840 0.00708260 0.00037257 0.04075100 0.00013863 -0.15605000 0.00861350 -0.75694000 0.02342600 0.02342600 0.00097064 0.02693500 0.02693500 -0.00097017 -0.01285100 0.02518600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 0.000 7.0111490 11.6684169 10.4512738 9.5120473 2.7998748 11.0408269 1.8681731 1.4531751 9.4399437 7.0480999 0.6051150 5.8454700 1.4531751 10.2497340 10.0111490 1.7426530 7.3166517 9.0604838 10.8177746 11.7285021 9.6621790 7.1129513 10.2888530 NA 10.2110065 10.1983609 7.7073950 NA 10.7569343 3.9270810 13.4529970 12.4434939 6.6186190 9.9284367 8.1240065 9.7840704 3.7094892 0.2832106 NA 3.0905825 10.2665784 10.3231757 9.9266339 4.7094947 9.4052476 8.6130247 10.6833075 6.3546902 9.3118253 NA 9.9871321 4.1658718 4.3276227 9.1001482 7.2872802 3.6755450 8.7354697 6.4430994 8.8445165 -1.7169079 13.8400938 0.6051150 10.2522553 -1.7169079 8.3493179 4.2832254 7.7750815 8.4705808 13.088612 4.327623 8.990588 12.744516 10.539142 10.155903 13.335797 12.024063 9.205047 10.265866 12.475059 11.354020 8.284637 8.460648 2.090582 7.552356 11.020053 10.8775532 7.5778495 8.4841273 8.7538873 7.6604388 10.2494816 5.1658718 6.0711320 8.1658718 6.5406163 1.9836777 9.9392064 5.7564469 9.5429719 9.4537795 10.9798875 9.5078333 11.5008834 3.4125106 11.5167778 9.6889019 11.4171735 10.3408819 10.7485399 8.4176547 10.2124869 8.9225692 NA 10.1304699 5.8756867 10.2117469 5.6755450 10.9569792 9.1216446 6.6141459 14.4115653 10.4559686 10.1689249 12.3525105 10.2396047 9.3132059 0.8682126 TCGA-OL-A97C 67 0 NA 271 breast stage iib t3 n0 m0 female 2013 NA no other specify 0 black or african american not hispanic or latino NA NA 3 5 NA NA 1 2 1 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8565443 9.7688187 11.9417183 8.7799422 7.9687037 8.4585678 10.0499772 9.9657843 10.4064082 13.5455420 10.6428817 10.4369462 -0.5666132 12.3746594 2.7553576 11.8260141 6.9252815 8.4390529 8.2757786 11.4630607 2.2407723 12.5169077 6.8512806 9.3802615 9.1407876 3.6813593 -0.5666132 8.6501743 9.4149957 4.1883139 10.0969864 8.3373101 1.4334402 4.9880166 9.6919944 9.6183036 9.6777922 11.1124686 9.6207805 11.7031395 1.0184205 10.3145423 14.6887152 8.8971981 9.4846372 11.0632403 11.1545276 5.9725870 0.4333868 9.3759428 11.4924348 0.4333868 10.8748164 4.7188329 5.0481403 4.8257449 9.6501741 11.8607412 10.0853770 12.7222944 12.8651871 8.6860939 10.9696756 10.4821741 11.0969865 10.5983352 5.0183894 11.2098614 12.1399244 -0.5666132 10.5334336 8.3403188 6.9655119 4.7188329 10.4334283 9.9937612 10.5008627 8.6033534 8.4995175 8.9030702 14.9804434 12.1583685 10.2999346 10.0342705 0.0026881 0.7147800 0.6716200 0.0039378 0.0000000 -0.0025800 0.7172300 -0.0094286 -0.0063405 -0.0043790 -0.0043790 -0.0043790 0.0011617 0.0011617 -0.0079722 -0.0079722 -0.0079722 -0.0064528 -0.0064528 -0.0114210 0.7130900 0.0046325 -0.0140380 -0.0140380 -0.0140380 0.6133000 0.6574400 0.6149600 1.4165000 -0.7550900 0.0026881 0.0071351 0.0000000 -0.0025800 -0.0153190 0.7172300 -0.0137820 -0.0094286 -0.0063405 -0.0038256 0.8843300 0.8763500 -0.0043790 0.0058834 -1.2929000 -0.0042407 -0.0049322 0.0011617 0.0011617 -0.0196720 -0.0079722 -0.0079722 -0.0079722 -0.0064528 -0.0064528 -0.0064528 -0.0114210 0.7130900 -0.7415600 0.0053273 -0.0140380 -0.0140380 0.1032800 0.6133000 0.6422900 0.7087700 -0.0114120 0.0138240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.642 0.642 0.715 0.715 0.689 0.689 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.642 0.642 0.715 0.715 0.689 0.689 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 0.120 7.9132084 15.5024585 8.5393368 11.6528994 3.0183849 10.3014792 1.0184205 NA 9.3433214 7.7372088 -0.5666132 8.2631509 1.0184205 9.5920380 9.8887556 6.6622468 11.0103850 10.5189009 11.8672746 9.8617885 9.2189136 7.8428192 11.5876136 3.7553576 8.7165167 10.1545275 7.8128069 -0.5666132 10.9555194 7.3934299 13.3448203 12.4702888 5.6622482 9.8565443 8.4914202 10.1604980 6.0032829 0.4333868 1.4334402 5.2914083 9.2929632 9.9402318 8.7188305 7.0333415 9.1182647 6.8512806 10.1260439 4.7909805 9.7222944 NA 12.3076413 6.2914102 3.6033593 9.7048213 6.7655997 2.8928573 9.1005399 12.2561983 5.2914083 -0.5666132 13.9240912 -0.5666132 11.1299612 -0.5666132 9.3685933 7.6766024 7.1613486 9.7222944 12.634442 7.588246 8.126916 12.374659 10.388352 10.273419 11.463061 11.050896 9.077285 10.530144 13.534830 10.227032 9.375943 8.968704 2.603359 6.884639 11.167291 11.9287838 6.9491287 8.2914092 8.4221131 7.6331006 10.3569490 7.3282459 4.7553576 10.6428817 5.4557974 5.1338676 9.7222944 8.4353152 13.7333518 10.7019704 9.2867379 8.9783927 11.2627547 5.4995175 11.9871128 9.6777922 10.3091777 10.1364667 10.3927058 10.3335405 10.2440000 8.9956708 NA 9.6217698 5.3403201 10.8748164 8.8928600 10.6652496 9.6501741 7.0554798 14.3639347 9.7165167 10.2929631 12.8288286 11.9432034 9.8732592 -0.5666132 TCGA-PE-A5DC 72 1 1430 NA breast stage iiia t2 n2a m0 female 2005 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 1 2 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.983722e-06 7.82313e-07 9.6142959 9.4353556 10.7910521 7.5212918 8.3685396 9.3151002 9.6362503 9.4173555 10.3876175 13.6323544 11.5576966 10.3506293 0.7798060 13.0380228 3.0277556 9.6432368 6.0466111 8.1656874 6.2392567 12.6963575 4.8883487 13.9378033 5.0836048 9.4965930 11.0486592 7.7628185 1.9497590 11.0178563 10.3940745 0.3647965 7.7340213 5.8672886 -0.2201100 4.4236790 9.3676024 9.4776611 8.7826399 9.7727632 8.8619740 10.6432368 5.9989943 9.3315330 14.4180062 7.2570163 9.8187439 11.2227683 10.4615025 4.7571033 7.2474301 7.7798251 10.9209740 -0.2201100 10.0972375 7.7599647 4.1373806 4.0652276 9.7987205 12.0450003 10.1613679 11.8624729 12.5111439 7.6253151 10.0887326 9.7142529 11.1724106 10.3392020 3.5347091 11.1428645 12.4294179 -1.2202780 10.2801689 8.7656667 3.7834252 2.1017509 10.5697660 10.0807493 10.4793973 9.2238043 1.5871729 7.6095474 11.8935670 11.9581785 9.8599762 9.4715683 0.0000000 0.0000000 -0.0370820 0.7068200 -0.0008316 -0.0059522 0.1224100 0.6728900 -0.6849700 0.0048579 0.0048579 1.1589000 0.0022193 0.0153080 -0.0769450 2.8855000 0.8956800 0.0526680 -0.0076101 0.0332670 0.6823500 0.5856000 -0.5863700 0.0573680 0.0573680 -0.0062286 -0.0062286 0.1584600 0.6957700 -0.6620700 0.0000000 -0.5832400 -0.6721400 -0.6741700 0.0020805 0.1224100 -0.0048268 0.6728900 -0.6849700 -0.6849700 0.6980200 0.0297470 -0.6834500 -0.6643000 -1.2929000 0.0353830 0.0175120 0.0153080 0.0181030 -0.3877200 -0.0325870 -0.6758200 -0.6758200 0.0115390 -0.0076101 0.0238470 -0.6639300 0.0132130 0.0235660 -0.6873600 -0.6762800 0.0573680 -0.6648500 -0.0062286 -0.6465000 0.0094491 0.0072217 -0.6701200 0.000 0.000 0.000 -0.599 0.000 0.000 0.000 -0.678 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 -0.155 0.000 0.000 0.000 -0.599 0.000 0.000 0.000 -0.678 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 -0.155 8.414636 12.507745 6.989279 9.826267 1.511013 11.464135 2.101751 1.101785 9.067537 7.065227 NA 7.941259 3.779827 10.543037 9.777004 7.180704 7.880487 9.452250 9.147240 10.571802 8.615417 7.704638 11.732384 0.779806 8.176429 9.808422 3.239261 1.949759 10.877199 4.587179 12.414976 11.911843 7.909108 9.206090 10.096106 9.097238 6.438037 3.587185 0.779806 6.154865 9.522134 10.034263 10.266157 5.206088 9.621861 9.663995 9.731110 5.137376 9.368539 NA 10.148877 0.779806 5.650190 9.053888 6.109666 1.949759 9.897468 7.473312 6.802193 2.101751 14.011758 1.101785 10.682577 -0.220110 6.644011 6.172141 8.243349 6.295525 14.899613 7.322857 8.761392 13.038023 10.538048 10.445161 12.696357 13.008644 9.697197 9.676914 12.441269 10.973350 7.779825 7.893567 2.239245 7.824219 11.453355 11.264144 4.452253 8.767089 10.111861 8.818744 10.438063 5.898767 6.423681 11.557697 6.394535 NA 6.580724 7.746042 9.692714 9.312181 6.680691 9.529694 9.231036 4.206088 11.259090 8.782640 10.128553 10.169994 9.680692 9.949750 10.843557 7.494071 0.779806 8.746777 3.423686 10.097237 4.710564 11.217837 9.798720 6.705291 14.114447 10.000203 9.643237 11.873242 10.978884 9.327683 -1.220278 TCGA-PE-A5DD 64 0 NA 1953 breast stage iia t2 n0 m0 female 2006 NA yes infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 3 2 NA NA 1 4 3 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1.179111e-06 4.855162e-07 8.926535 9.042579 11.412909 8.272140 8.337883 8.978634 10.841947 9.102505 10.285416 9.273300 10.894498 10.245808 0.576377 12.111446 0.576377 9.869421 7.308782 7.957154 10.534885 12.980143 1.798714 14.502814 7.919148 9.746107 10.445155 5.836861 -1.008682 11.358104 10.037812 -1.008682 8.839993 5.968651 NA 6.002597 9.498173 9.580084 8.846238 10.850128 9.971509 10.817521 NA 11.492212 14.806278 9.157947 11.064842 10.346721 9.963631 4.922107 4.035765 8.473169 10.852069 1.313304 10.394382 5.530530 5.691811 4.576335 9.078833 12.057795 10.700884 11.440002 12.426910 9.362057 9.951372 9.396852 10.615708 11.018930 4.078832 10.798725 10.442065 -1.008682 10.516401 8.686598 5.037075 5.400760 10.652257 9.416586 9.622547 8.355504 2.991372 8.385832 13.255739 12.042409 9.869421 10.568326 -0.7698800 0.0291840 0.8048000 0.0828410 0.5366100 0.0000000 0.0189910 0.0127950 -0.0204570 -0.1570700 -0.1570700 -0.1570700 -0.0475840 0.0554260 0.0197830 0.0197830 0.0197830 -0.0127850 -0.0127850 -0.7691100 0.0300290 -0.7545200 -0.7341400 -0.7341400 -0.7117600 0.0817550 0.0817550 0.0817550 0.0777180 -0.1794200 -0.7698800 -0.0802750 0.0828410 0.0000000 -0.7842000 0.0189910 0.0189910 0.0127950 -0.0204570 0.0063871 0.0169850 -0.0098185 -0.1570700 0.0209030 0.0209030 0.0209030 0.0209030 0.0554260 0.0994330 0.0197830 0.0197830 -0.7836100 0.0353830 -0.0127850 -0.0127850 0.0442900 -0.7691100 0.0300290 -0.7495000 -0.7540000 -0.7341400 -0.7117600 -0.7648400 -0.7299400 0.0817550 0.0513870 0.0244080 -0.7339800 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 -0.174 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 -0.174 9.260496422 13.029345555 3.239291103 11.180267543 2.706154773 11.865006057 1.798714147 NA 8.942654370 8.370747990 0.576377015 7.826472855 2.691802133 9.766980032 9.983599892 2.313303907 8.674364251 9.357691869 10.930214118 10.015124114 9.772524405 8.215371370 12.109337410 1.576328637 8.744586305 10.066180164 4.200826039 NA 10.605619429 3.746259014 12.158787837 11.307651254 8.440518311 9.882393918 8.364234918 9.998396929 5.258157075 1.798714147 -0.008682243 2.576328637 9.229774400 10.772319523 10.593140474 5.576331661 7.824481475 8.024792831 9.544038841 5.591281472 8.785785598 NA 11.244626303 2.576328637 4.798724514 9.970644895 6.099370956 5.348922861 9.906502218 9.054764654 8.522750996 1.991354042 13.815881008 0.576377015 10.437936064 NA 7.344516956 7.084126999 7.161295169 8.022037065 12.573105 5.898259 8.227384 12.111446 9.949922 10.410803 12.980143 10.872484 9.316675 10.157533 12.747718 10.094002 8.473169 9.073519 2.161307 6.576332 10.601010 11.418944458 6.705615801 8.146187810 9.253464606 7.366408773 11.078766257 7.557423876 9.504110076 10.894498350 7.925060056 -0.008682243 5.649580972 7.920805395 10.238110318 10.558375078 7.035763554 9.572570255 10.381538625 5.576331661 12.740834826 8.846238177 10.646453137 10.530043618 11.259619288 11.001198320 11.075513712 7.670849540 3.945570250 9.558622370 6.191041443 10.394381769 6.295149946 11.256949605 9.078832624 6.719290242 13.159436130 9.398637463 9.723537060 11.969186221 11.056449204 9.891481769 1.313303907 TCGA-PE-A5DE 41 0 NA 2645 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating lobular carcinoma 0 white NA NA NA 3 4 NA NA 3 4 3 3 3 2 0 0 0 0 7 0 5 7 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 5 7 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.98205e-06 3.606692e-06 9.9125928 9.2720570 11.6604207 8.5416407 8.3048469 9.5450755 10.5493578 10.2931487 10.2741284 12.7208972 11.3378987 10.5684722 -0.1708811 11.9583965 3.2214286 9.2490736 5.4438221 7.9532350 8.7117564 12.9657042 -1.1710435 14.0500964 6.8898094 9.9914671 9.8985633 9.2030663 2.2885358 11.3020581 9.8326315 1.1510145 8.0139887 7.0090224 -1.1710435 5.7239326 10.0800040 9.9258287 10.7858527 11.7193778 9.5433590 10.6616080 2.7359987 10.7945371 14.5513340 7.9565144 10.5794018 10.6340512 10.1145158 4.4140746 1.6364506 8.2385046 12.3349251 NA 10.3784169 5.9889846 8.2106562 4.4438254 10.5544798 11.6870945 10.7513262 11.8862591 12.5870243 8.1954357 10.2474932 10.0171583 11.2792937 10.8248806 4.6870943 11.3316967 9.6243415 1.6364506 10.6324375 8.6348575 3.7151795 7.4511649 10.4378304 9.8680325 9.6627942 9.1317525 3.2885505 9.7231734 13.3216552 12.7766591 9.9145860 9.6283952 0.00110930 0.75088000 0.78350000 0.01106500 0.32093000 -0.32100000 0.34827000 0.34705000 -0.33006000 -0.33629000 -0.33629000 -0.33802000 -0.33077000 -0.34517000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00387790 0.00569190 -0.10099000 -0.35110000 -0.35110000 -0.35110000 -0.00456950 -0.00456950 -0.00456950 0.33472000 0.00110930 0.00110930 0.00235810 0.01106500 -0.32100000 -0.32985000 0.34827000 0.34827000 0.35675000 -0.33006000 -0.33006000 0.36561000 0.10570000 -0.33629000 0.34524000 0.34524000 0.34524000 0.34524000 -0.34517000 -0.34113000 0.00000000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00069303 0.00416320 0.00569190 -0.09060700 -0.33756000 -0.35110000 -0.35110000 -0.30345000 -0.00456950 -0.00456950 0.33901000 0.01922300 -0.36533000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 0.000 10.363416 12.300027 1.636451 10.031237 6.186665 11.581076 5.288547 NA 8.937638 7.251178 -1.171044 6.829114 1.999026 9.938944 9.511230 2.151047 9.591496 8.929776 10.407486 10.360495 8.995264 7.687094 10.925499 4.584000 8.121435 10.315446 4.783310 NA 10.883379 1.636451 12.871371 12.349855 7.873507 9.458470 8.490892 9.417828 2.288536 1.151015 NA 4.806391 8.513862 10.194889 10.617016 5.238504 6.252944 7.515614 9.752441 4.978859 8.885751 NA 11.118556 5.204152 3.472969 9.639420 6.968972 7.259566 10.409843 8.752441 9.706398 NA 13.575943 2.288536 10.535610 NA 7.876238 5.597299 7.607190 8.478370 12.951228 5.487326 8.173409 11.958397 10.487325 10.511669 12.965704 11.908098 8.912593 10.403707 13.374319 10.319964 8.238505 9.184465 1.636451 7.259566 10.887444 11.411726 5.711756 8.963540 8.758372 7.973772 10.905902 9.489109 9.056730 11.337899 7.593985 2.916572 6.840341 7.785286 9.774557 11.031544 6.794898 9.308894 10.674212 8.033685 11.590989 10.785853 11.057932 10.293659 9.897892 10.470262 10.811038 8.481958 NA 9.922194 9.128322 10.378417 7.687094 11.192974 10.554480 7.247387 13.710562 10.327963 10.694847 12.468906 10.929776 9.101743 2.735999 TCGA-PL-A8LV 54 0 NA -7 breast stage iiib t4 n0 m0 female 2013 NA no medullary carcinoma NA black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4475311 8.4446940 11.3869930 8.5592972 9.0817180 8.4332892 10.8920267 10.1130299 13.4543647 12.2655095 11.2338125 9.9371360 3.3946102 11.9037813 1.4560176 10.2158974 6.1656668 8.6800110 5.9690791 7.6524062 -1.1291027 8.0207939 8.3406887 9.7604671 11.0823267 5.9371348 -0.1289449 11.4604638 11.0926339 2.3304724 6.5220981 8.9003340 1.4560176 6.6057565 10.0271299 9.5381583 8.4560094 9.2395532 9.0067561 11.3439914 -1.1291027 8.4004773 14.9223195 9.2048394 9.5930004 9.9051579 9.7605508 4.4256339 3.1189743 8.4820714 9.6840262 NA 10.1016677 4.5149050 6.0707199 6.8252425 8.1748273 11.9628127 10.9575148 11.3999892 12.0030644 7.4967555 10.6687083 10.4038459 10.4375766 11.4972121 4.3113360 11.6156704 11.6973967 5.5292587 10.3763621 9.4351962 3.9619011 4.1929753 10.6458339 11.0381513 10.3798319 9.6784017 0.8710551 6.9208959 13.4715405 11.4065652 10.1483342 11.0334381 -0.132490 0.870930 0.870930 0.064251 0.495140 -0.329930 -0.534370 0.884360 -0.114800 0.603080 0.603080 1.638900 0.600840 0.157530 -0.315620 -0.509990 -0.509990 -0.340770 0.042333 1.258500 -0.104050 0.481340 -0.391390 0.038938 0.024854 -0.393420 0.643260 0.643260 -0.380530 0.442770 -0.132490 -0.790580 0.064251 -0.430410 -0.331870 -0.507980 -0.469390 0.058535 -0.114800 -0.139700 -0.361370 1.009300 1.811700 -0.303790 1.165000 1.165000 1.165000 -0.247370 -0.247370 -0.410440 -0.509990 -0.521460 -0.521460 0.520160 0.000000 0.000000 -0.496720 0.297240 0.110790 -0.381770 -0.391390 0.024854 -0.316550 -0.424710 0.643260 0.485470 -0.425360 0.265800 0.586 0.586 -0.326 -0.510 -0.316 -0.316 -0.497 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 -0.115 -0.115 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 0.186 0.586 0.586 -0.326 -0.510 -0.316 -0.316 -0.497 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 -0.115 -0.115 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 0.186 9.1401736 13.1285819 4.8017847 8.9703947 5.9690791 10.6605804 4.5989666 1.6783875 10.1736858 10.7110379 6.1189743 7.5505267 4.5989666 10.0271299 9.4606979 5.8483275 8.9072203 10.5745178 5.8483275 9.5505269 9.0776460 7.6259345 10.3098386 2.8710551 9.1331417 10.1941016 3.8710452 -1.1291027 11.1343160 4.3628977 12.5025649 12.8526141 7.3263738 9.2719261 8.4875957 10.6036382 3.4560044 1.4560176 0.8710551 2.0409625 8.0334379 10.0233316 9.8418717 1.8710551 9.4214665 8.6589494 9.8339429 3.8252463 9.4728175 -1.1291027 11.0515776 2.9585086 4.1929753 10.4466002 6.0095756 8.0182519 9.0890044 7.4140789 10.5792685 0.8710551 13.7506779 NA 10.3723864 -1.1291027 8.4160113 5.4560077 7.8878548 7.4371012 10.259570 9.416011 8.070719 11.903781 11.031549 11.440902 7.652406 11.781127 8.265510 9.646657 13.672401 11.376858 8.482071 8.792888 2.192983 7.836831 9.794374 11.302806 4.485755 8.496756 9.045973 9.392559 10.113292 7.588723 6.652406 11.233813 12.679106 -1.129103 7.334571 9.113673 11.760551 10.819049 8.625015 9.943179 7.518505 8.911337 10.941912 8.456009 10.693618 9.846895 12.381193 12.731649 11.634674 7.668708 NA 9.480595 9.310878 10.101668 5.765864 12.039521 8.174827 7.334776 14.126075 10.893068 9.856889 11.701760 10.994522 10.404377 3.330472 TCGA-PL-A8LX 35 0 NA 5 breast stage iv t4 n1a m1 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 3 NA NA 1 1 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6697882 9.1842039 11.6358879 8.1290764 9.0195123 8.6776506 11.4369453 9.2813090 10.1930074 13.1523968 11.3982144 10.5028167 -1.1677986 13.4698607 2.2916036 11.1322269 7.0219849 7.5221586 7.6523395 14.0397849 NA 15.1932132 -1.1677986 10.5151550 10.0585726 7.5702527 -1.1677986 8.5116404 9.9189601 -1.1677986 7.5498370 5.4468716 NA 4.3867489 10.0818665 9.1495731 10.6583116 7.8349754 9.5828674 11.2058413 1.1540647 6.5937123 14.3763702 8.5695093 11.9088090 11.6813700 10.3625668 2.6395100 NA 8.5326002 8.9729901 NA 10.0705651 10.4532965 4.0020814 3.9614474 9.4903720 11.3912984 10.5626305 10.5330336 12.3139598 8.9857125 10.2217918 10.2739478 9.8908286 10.5995173 4.5870469 11.1287898 12.9861873 1.6395100 10.6756889 8.8655833 3.8796078 4.5870469 11.4562704 9.9315081 11.1899873 8.7717397 -0.1677986 7.2028477 10.0871890 10.5740487 10.8307508 9.5986894 -0.3627300 0.0259440 0.0286140 0.0132050 0.0081876 -0.3637500 0.7269600 0.0134840 0.0165570 0.0325550 0.0296430 0.0296430 -0.3621600 -0.7339000 -0.0364100 1.2616000 -0.7362600 0.0122280 0.0122280 0.0101370 -0.2440000 0.7309300 0.0030439 0.0030439 0.0030439 -0.3650000 -0.3650000 -0.3650000 0.4186400 -0.3627300 -0.3627300 -0.3424000 0.0132050 -0.3637500 -0.3613700 -0.2393300 -0.2393300 0.0134840 0.0165570 0.0165570 0.1017500 0.1064200 0.0325550 0.0000000 0.0000000 0.0058775 0.0058775 -0.7339000 -0.7339000 -0.0364100 -0.2666100 -0.7451200 -0.7451200 0.0122280 0.0122280 0.0122280 0.0101370 -0.7405800 0.7137600 0.0099980 0.0030439 0.0030439 -0.3667000 -1.2929000 -0.3650000 -0.3933100 -0.3735900 -0.7562500 -0.734 -0.734 -0.695 -0.695 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.482 -0.239 0.000 0.000 0.100 0.100 0.000 0.000 0.000 0.000 -0.162 -0.162 -0.734 -0.734 -0.695 -0.695 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.482 -0.239 0.000 0.000 0.100 0.100 0.000 0.000 0.000 0.000 -0.162 -0.162 8.3439132 10.9768186 4.7390488 9.6435352 3.3557211 12.2380996 -0.1677986 NA 8.7834452 6.9354480 NA 5.5971646 -1.1677986 10.1387918 9.0693703 3.8765562 4.3867489 10.4701437 11.5903836 11.8586838 9.3506561 7.3399551 11.7869020 4.0910566 10.4908182 9.5710971 2.8321609 0.4171639 11.8222644 4.4171234 12.2964509 12.1116259 7.7863565 9.6721515 8.8545281 9.5472643 0.4171639 2.9196261 -1.1677986 5.5186610 9.2500129 9.2394281 8.9780926 0.8321204 9.4899880 9.7621584 10.4385657 4.1540890 9.6085934 NA 12.0134680 1.1540647 9.2137033 10.1995970 6.5362021 -1.1677986 9.2104553 8.0729515 11.7759572 -0.1677986 14.0154081 NA 11.6298219 NA 7.5532599 7.0800884 7.1540890 10.1042069 15.482489 5.504585 8.549837 13.469861 10.471953 10.958219 14.039785 14.966186 8.605151 10.408645 12.280277 10.677650 8.532600 7.699439 -1.167799 7.457869 10.631037 11.0992396 7.1540890 8.1808888 9.3109299 7.9301927 10.4533835 6.8377843 9.5369287 11.3982144 9.0367316 7.9562815 4.5045886 6.6991921 8.9022813 10.2212540 7.9554285 9.5753118 9.1630773 3.2244725 10.4653691 10.6583116 9.7132743 10.2077429 14.8480110 9.2169442 10.9079738 8.0269173 0.4171639 9.1353248 1.1540647 10.0705651 4.1175621 11.6024113 9.4903720 6.6010071 13.3908896 10.7247032 9.2584252 12.8042427 8.4095891 9.7239442 -0.1677986 TCGA-PL-A8LY 30 0 NA 8 breast stage iib t3 n0 m0 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.073038 8.877038 11.322200 7.049387 8.827491 9.110663 9.648193 9.748909 11.392324 13.566454 10.906545 10.535665 3.452450 13.100180 2.300446 10.743392 8.941095 9.341195 10.426866 11.688944 1.715498 13.272152 7.834427 10.029299 10.513147 3.522847 NA 11.489449 9.467030 2.830965 9.284075 8.058301 NA 1.937872 9.412453 8.966574 9.785159 10.429731 9.220636 10.362345 8.976013 10.145938 14.843749 6.829366 10.114942 10.404319 10.494111 6.606257 2.715476 8.058301 12.191219 NA 11.051248 6.037413 5.300450 3.130519 9.521767 12.210675 10.854611 11.908190 12.231678 9.377264 10.836156 10.754862 10.415347 10.724381 3.937881 11.168070 11.159811 NA 10.370122 8.955482 4.591596 2.300446 11.798744 9.614339 10.307320 8.560976 5.871991 10.056078 13.034123 12.867771 10.271992 10.248166 0.00210190 0.00210190 0.00293470 0.00279590 -0.00366370 -0.00048237 0.00362900 -0.00025591 -0.00025591 -0.00302630 -0.00302630 0.00585230 -0.00189530 -0.00189530 0.00335060 0.00335060 0.00335060 -0.00482490 0.00057594 0.00099199 0.00047517 0.00237950 -0.00681280 -0.00681280 -0.00681280 -0.00225860 -0.00225860 -0.00979730 -0.00274940 0.00210190 0.00210190 0.00460140 0.00279590 0.00710400 -0.00786500 0.00362900 0.00362900 -0.00025591 -0.00025591 -0.00025591 -0.01142000 -0.00620730 -0.00302630 -0.00122600 -0.00122600 -0.00122600 -0.00122600 0.00376790 0.00000000 0.00654760 0.00335060 0.00085329 0.00085329 -0.00482490 -0.00024568 -0.00024568 0.00099199 0.00196310 0.00237950 0.00418460 -0.01396200 -0.00681280 -0.00053311 -0.00225860 -0.00979730 -0.00274940 -0.00025591 -0.00427160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.1694425 11.8393917 6.2802697 10.5483758 3.4646683 10.9582630 2.1305356 2.5899552 9.5271282 10.9237202 2.8309651 6.1305232 4.9634140 9.9978022 9.3736974 3.0374174 5.7304362 10.0200274 9.7516595 11.1925695 9.4386690 6.8787168 11.5233774 1.7154981 9.5196168 10.5776066 7.7958591 NA 10.6467158 4.7154871 14.3885372 12.6048631 6.9507029 9.9159759 8.5163859 9.8753573 3.8309651 NA NA 1.4524373 9.6521238 10.3369273 8.9135216 4.5899552 8.9737378 7.4524513 10.6398036 4.6540861 10.0471493 4.7154871 12.2181520 0.7154541 5.3004496 10.0642435 7.6262982 4.9634140 9.1163653 6.7079527 8.0847196 1.1305356 15.1607594 NA 11.0861733 NA 8.3855518 7.2903949 7.5776063 8.8361558 13.161739 6.290395 8.652124 13.100180 10.279635 10.661417 11.688944 11.455548 9.397310 10.029125 12.314934 12.725781 8.058301 7.988505 3.589955 7.788735 9.808243 10.984613 5.700379 8.728576 9.477037 8.023734 9.834228 6.470374 6.359342 10.906545 5.589955 5.589955 10.905310 7.918197 12.000888 10.138251 8.983833 10.306697 7.013166 5.802948 10.486447 9.785159 10.519617 10.365939 10.836588 10.091973 10.589443 7.763518 NA 9.553828 7.158429 11.051248 3.037417 11.076699 9.521767 6.715486 15.618803 10.377264 10.604229 12.489724 10.796747 9.187161 3.589955 TCGA-PL-A8LZ 29 0 NA 302 breast stage iiib t4b n2 m0 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 4 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8711030 9.3751118 11.4645925 8.5256296 8.6412353 9.8478920 8.7367537 10.4930847 10.9882493 11.6894120 10.3488973 10.4017695 1.7723924 10.6155488 1.5797594 10.8887569 6.1986768 8.9272310 9.2359374 7.4448385 -1.2276920 10.5586825 8.3308335 9.7840806 10.3531426 5.3270011 1.7723924 12.5087705 10.7038891 -0.2275231 8.4518931 8.6519963 NA 5.9818663 10.0042341 9.5773506 9.0238954 9.2682681 9.5045803 10.8548946 -0.2275231 4.9818663 14.5878213 8.3954532 9.9769841 10.7546935 10.0960307 4.6303938 NA 10.3403690 11.5859937 NA 9.8276954 5.9915808 7.3193072 6.8598764 9.7989364 11.6685561 9.9628550 10.9373199 12.4986311 7.3834373 10.1609685 10.1885560 11.1247323 10.6131909 5.2153563 11.5893966 8.1277638 -0.2275231 10.7829411 8.9879458 3.9053990 5.8704461 11.3632338 9.7589660 10.9529437 9.3403691 3.7724136 7.4054078 13.2608807 11.7845136 9.7759309 9.8763564 0.125450 0.983010 0.394080 -0.033035 1.394000 -0.015257 -0.042865 0.127750 0.218420 -0.040248 -0.040248 0.484010 0.904350 -0.046560 0.456440 0.385710 0.385710 -0.035488 -0.035488 -0.062643 -0.036713 -0.058796 -0.067630 -0.067630 0.423300 0.297190 0.297190 0.297190 0.163200 0.153360 0.125450 0.061609 -0.033035 -0.334520 -0.016837 -0.101030 -0.101030 0.127750 0.228410 -0.298660 0.212800 0.090533 -0.040248 0.771510 0.771510 -0.047434 -0.061494 -0.046560 -0.092912 0.365540 0.385710 0.420280 0.420280 -0.035488 -0.035488 0.431370 -0.033717 -0.036713 -0.047299 0.417260 -0.067630 -0.067630 -0.176300 -0.109890 0.297190 0.388440 -0.034398 -0.344250 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.403 0.403 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.270 0.000 0.000 0.000 0.227 0.227 0.000 0.000 0.000 0.000 0.772 0.000 0.134 0.134 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.403 0.403 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.270 0.000 0.000 0.000 0.227 0.227 0.000 0.000 0.000 0.000 0.772 0.000 0.134 0.134 8.8874567 13.5751312 3.1647380 9.7738212 3.1647380 11.1926364 4.9622390 4.4728516 8.6702583 10.1100348 2.6793112 7.7539802 2.3573831 11.1321625 10.0824576 1.7723924 8.3592528 11.4364157 7.5668289 9.5430769 9.0572255 7.6210357 12.9367699 3.8168045 8.7090507 10.0173713 3.5797715 NA 10.8508974 2.2318317 12.4320744 12.7725890 8.6365992 9.4875169 12.8069540 9.5676409 2.7724136 3.9818618 -1.2276920 -1.2276920 9.4412980 9.7251542 9.4571615 5.4162689 9.8170188 6.9373197 9.7525526 6.3037935 10.1944776 2.3573831 12.0473734 4.0203422 3.9818618 9.4110480 6.2734543 6.1299650 10.0635837 9.6053030 8.4986310 -0.2275231 12.9153975 1.5797594 11.1097561 NA 9.1923732 6.0012325 8.1711568 7.2602534 11.352358 8.590995 8.064735 10.615549 9.764643 10.896534 7.444838 9.225684 8.973312 10.012608 13.848268 11.207823 10.340369 6.859876 2.579759 8.153956 10.692394 11.277728 4.630394 8.812703 9.199726 8.286140 9.864926 8.688292 6.822261 10.348897 10.972085 4.198675 4.726608 10.309257 11.820048 10.580975 7.530637 9.110035 9.297934 7.901696 10.433937 9.023895 10.757899 10.225684 10.251688 11.177820 10.500333 9.126662 NA 10.344483 7.974537 9.827695 6.272258 10.800878 9.798936 8.733863 12.792872 10.574525 10.826000 12.659538 11.251688 9.204955 4.472852 TCGA-S3-A6ZF 64 0 NA 572 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 NA NA 1 2 3 4 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.78849437 10.05268949 11.65009285 9.32845974 8.21580574 9.14138553 9.86723008 9.76362901 9.47950402 13.83188123 11.15973210 10.46045723 4.39403390 12.75837152 2.91758451 9.29414375 4.78635066 8.44115560 9.49074681 12.63280956 5.35981631 13.53242344 7.47883998 9.57461831 10.73721734 7.55137836 2.78634544 10.29452116 11.47817564 -0.02107222 8.24734130 7.48678918 12.92894241 3.97899182 10.64433004 11.10290000 9.90430134 10.57704667 9.75652347 11.27667468 0.71598120 10.50614530 14.17341757 9.40938393 9.41431717 10.97381896 11.28695384 3.64196213 1.56393907 9.24812089 10.82003429 -0.60603472 10.83593836 7.21739844 6.51297270 5.40525721 10.76308361 12.38750081 10.06822393 11.72186495 12.86335549 9.15724410 10.50059454 9.85192546 11.31177664 10.46079354 4.62284838 11.62959719 11.15308761 NA 10.46314567 9.25356648 4.69488576 6.67480242 9.95722787 9.98882270 10.05536433 9.59063383 1.39402017 7.13886565 11.98356576 10.75515297 9.61138358 8.73388170 0.644690 1.044100 1.050100 1.079500 0.361490 -0.014916 0.000000 0.160400 -0.434420 3.656900 0.362310 1.129400 0.443920 -0.026614 -0.417290 0.652950 1.984000 0.436990 0.436990 0.007500 1.605300 -0.100260 0.054660 0.054660 0.054660 -0.376730 -0.376730 1.046000 1.066300 -0.410490 -0.438970 0.025671 -0.432680 -0.413660 -0.014916 0.000000 0.000000 0.160400 -0.434420 -0.434420 0.521880 0.012097 0.026092 0.399440 0.399440 -0.417180 0.944660 -0.026614 -0.027671 -0.417290 0.652950 -0.431700 -0.431700 0.436990 0.436990 0.436990 0.007500 -0.402190 -0.100260 -0.398150 -0.400590 0.054660 -0.410030 -0.376730 -0.376730 0.020903 -0.122130 -0.379660 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.439 0.589 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 0.121 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.439 0.589 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 0.121 9.20058135 13.13618315 8.06998888 10.71511414 3.85346676 10.89063577 4.86976285 NA 9.30467439 7.55893877 0.71598120 8.14358270 1.39402017 10.66957418 9.38555356 3.91759406 8.11342026 9.61441005 8.11170794 9.78473806 9.14905278 8.60956476 10.48513637 3.14891784 7.76689658 9.53038195 2.91758451 NA 10.33361090 0.97900097 11.57456245 11.61229213 8.15391982 10.03698583 10.57952657 8.76471902 3.67943506 2.30091443 -0.02107222 9.62104579 8.07702611 9.99673051 10.86189188 3.48149270 11.10049743 7.70464445 9.82239174 4.03789173 9.62405208 -0.60603472 10.45574034 3.71595925 3.39403390 10.30990353 4.62573222 5.22692078 9.77773597 7.49469401 7.99951132 1.97900097 13.66279293 0.39407507 10.62465255 -1.60603472 7.21739844 4.76907349 8.72158422 9.25434271 13.142737 6.388386 8.080532 12.758372 9.942054 10.958657 12.632810 11.451685 10.121527 10.976174 13.495474 10.421592 9.248121 9.194123 1.715981 7.520736 12.372742 10.5041887 6.8411152 8.3982520 9.2827750 9.3084169 10.7846010 7.7970435 7.5258888 11.1597321 6.5233142 1.7159812 4.0664595 8.6119528 10.1013907 9.9995112 8.2751458 8.7361063 11.8261820 6.2582174 11.8537565 9.9043013 9.8898866 10.0761485 11.3223650 10.2134124 11.2449998 8.5539030 NA 9.5322266 7.0593672 10.8359384 6.7690708 11.0438738 10.7630836 7.3189034 13.2582662 10.0147097 9.6004355 12.7767907 10.1638695 10.1847873 0.7159812 TCGA-S3-A6ZG 71 0 NA 562 breast stage iib t2 n1 m0 female 2013 NA yes mixed histology (please specify) 1 black or african american not hispanic or latino NA NA 1 2 NA NA 1 4 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5534152 9.7905723 11.7719105 9.8820934 8.5996678 9.6868578 10.4922619 9.6260980 9.2377604 8.7690775 12.4083476 10.4981842 6.5428988 12.8966210 3.3188952 8.8027128 7.0969744 8.5356428 10.4410780 13.0756619 1.4888235 13.6082316 5.4274218 9.8812731 11.1376790 5.3849857 -0.6810758 9.6648567 10.8120020 2.3188952 7.2846816 5.8345975 1.1262460 5.0603630 10.1141251 11.2604950 11.1100600 11.6787839 10.2577415 11.0891481 -0.6810758 11.8486937 14.0238544 8.5561071 10.3343122 11.6153832 11.3148409 4.4063598 -0.6810758 8.7976667 11.2150403 -0.6810758 10.1529731 6.9663555 6.0603630 5.4888235 9.7976667 12.4626789 10.7558688 12.5315455 12.9715180 8.2628771 10.7122875 10.9221595 11.2340295 11.0446894 5.9913223 11.9013920 11.3564440 -1.6813072 10.1108740 9.1262520 4.2991494 5.4988061 11.4988062 10.4090095 10.3853227 10.1270568 3.3188952 9.5283506 12.6951582 11.3262749 9.9806753 9.3721442 -0.144380 1.155800 1.022800 -0.135230 -0.137590 0.337880 0.340150 -0.190240 -0.194640 0.339340 0.339340 0.339340 -0.122780 -0.122780 -0.126290 3.656900 -0.642740 0.341770 0.341770 0.235350 0.347130 -0.241310 0.273630 0.273630 0.324570 0.514630 0.277640 0.277640 0.437830 -0.144380 -0.144380 0.000000 -0.137590 0.337880 0.337880 0.340150 0.340150 -0.170310 -0.190240 -0.194640 -0.132900 -0.132900 0.339340 -0.087447 -0.087447 -0.087447 -0.116150 -0.122780 -0.122780 -0.126290 -0.640760 -0.632060 -0.632060 0.341770 0.341770 0.341770 -0.738880 0.347130 -0.244690 -0.649580 0.273630 0.273630 0.265610 0.497530 0.277640 0.437830 -0.635570 -0.122910 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.325 0.325 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 0.000 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.325 0.325 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 0.000 8.52956837 12.70388316 5.94094898 9.32241492 4.21928471 10.26653405 1.64080600 -1.68130717 8.37146521 6.63630995 1.48882346 6.45332332 0.64080600 10.04554099 10.02625618 5.07378596 7.31607694 9.61121868 11.15514477 10.24073803 9.74495742 8.03314270 9.73146703 3.17688123 9.69610756 10.02927315 4.76183841 -0.68107584 10.53746032 3.67644796 11.98789287 11.64167029 6.98778244 9.80673714 8.10025707 9.43718945 4.97711045 1.31892416 1.12624604 10.63404667 8.91601856 8.94551875 9.57392567 4.27309063 7.53513382 6.72828789 10.94984677 5.99837831 9.76598038 -0.68107584 11.13027183 5.07378596 3.96275260 9.71394389 5.20885667 6.59035949 8.22879032 8.24073792 8.32030550 1.31892416 13.53602178 -0.09619044 10.23589612 NA 7.81075027 3.96275260 8.00013525 8.67864661 15.322495 5.794632 8.683032 12.896621 10.776278 10.661805 13.075662 12.762359 8.550478 11.101076 13.085219 11.067090 8.797667 9.403041 1.640806 7.384987 11.370786 10.862171 6.753526 8.832625 9.676449 9.648133 10.425676 7.450754 8.831638 12.408348 6.363292 3.318895 6.207641 7.433785 10.660138 10.176489 7.631780 8.410333 12.571119 6.627236 11.376046 11.110060 10.755348 9.280347 10.660416 9.738331 10.595022 8.734639 NA 8.974669 6.884951 10.152973 6.483804 10.597637 9.797667 7.654421 13.701724 10.331522 9.639698 12.610068 11.107819 10.108023 2.640829 TCGA-S3-A6ZH 29 0 NA 641 breast stage iiic t3 n3a mx female 2013 NA yes infiltrating ductal carcinoma 14 black or african american not hispanic or latino NA NA 1 1 NA NA 1 4 2 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3028760 9.8625603 11.9530059 9.1676008 9.1887770 9.2034946 10.7027271 10.3057507 9.3985460 16.0112554 12.1557006 11.4948916 -0.6668053 13.6413622 4.5810559 8.6674032 5.5030561 8.0627504 6.2460185 12.4432052 0.9180809 13.6854147 2.6550541 9.2656029 11.5527521 8.6266016 2.0335816 8.8408651 9.9570113 0.3330802 7.4468724 7.6950737 -1.6670343 3.1911046 9.7976756 10.9344364 9.1332208 12.3935724 9.5340283 11.4247305 1.3331375 11.4509352 14.6027496 6.9795807 8.3274830 10.5541127 11.1255134 3.6906853 0.6550770 9.2527380 10.8739843 -0.6668053 9.0064389 3.5810620 5.9551826 5.0055572 8.4403468 12.0774381 10.2058047 12.8410483 12.9441546 6.9404604 10.6920557 10.7735033 11.7189922 10.7902542 5.8877178 11.3629347 13.3929812 -0.6668053 10.2138612 9.3331299 3.0357822 4.1404842 10.0636000 9.6086723 10.3955134 9.6707517 1.1405169 10.0104089 12.4169415 10.8982319 10.1481127 9.2400204 -0.301080 1.020800 1.158200 0.098735 0.137050 -0.265860 0.116410 0.090895 -0.734660 -0.763790 3.656900 0.116560 0.074935 -0.769440 0.097717 3.656900 -0.745410 0.090771 0.084961 -0.727630 0.082505 0.042195 0.345380 0.345380 0.345380 -0.490970 0.644000 0.580450 0.019190 -0.422740 -0.301080 -0.381560 -0.753300 -0.300130 -0.265860 0.140460 0.140460 0.090895 -0.734660 -0.759990 0.104850 0.104850 -0.764820 -0.311990 -0.311990 -0.311990 -0.417950 -0.739390 -0.777220 0.097717 -0.824530 -0.761820 -0.761820 0.090771 0.084961 0.084961 -0.727750 0.082505 0.042195 0.755320 -0.836860 0.345380 -0.288550 -0.490970 0.644000 0.021211 0.120670 -0.398630 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.279 -0.279 -0.609 0.137 -0.266 -0.266 0.116 0.116 -0.708 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 -0.150 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.279 -0.279 -0.609 0.137 -0.266 -0.266 0.116 0.116 -0.708 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 -0.150 7.9086688 12.3713629 7.9823861 8.9209072 4.1589186 10.8289849 2.0335816 -1.6670343 9.3911216 6.9877654 NA 6.2814980 2.7254576 10.4588661 9.4765131 5.2989149 7.4854148 9.7869149 9.8319790 12.5538860 9.9073827 9.1332208 9.8857989 2.0335816 9.0222543 9.8881982 3.9478438 NA 10.5380066 2.5030434 11.7554575 12.1277488 6.4364184 8.9404601 7.8915504 10.3778655 2.2400090 1.5030434 NA 2.9181000 8.9805883 8.6651664 9.9469193 2.7925639 8.9038963 6.6729797 10.2115640 5.4726827 10.2981926 NA 9.6668443 1.6550770 2.9769868 10.1905277 6.7990225 3.5810620 7.7467575 6.7425210 6.9841815 0.3330802 13.5350240 0.6550770 11.4146133 NA 5.3665530 3.7254467 8.6127403 7.8991841 15.465318 7.307544 8.750982 13.641362 9.437073 11.129778 12.443205 10.850061 8.851616 10.860362 13.179306 10.362417 9.252738 6.431162 2.420590 8.301797 12.276835 10.6528020 8.5751130 8.8867592 9.2004085 10.2679264 10.5069943 6.3829784 8.7361418 12.1557006 6.3554973 3.1911046 4.0610503 9.2924001 9.4598342 9.4112807 9.4771507 9.1996360 12.9199696 5.0880186 10.1504333 9.1332208 10.5164551 9.3450559 10.6363398 9.5804640 10.3901062 8.9349007 0.9180809 8.7731270 5.4726827 9.0064389 4.4416561 10.2686633 8.4403468 7.7864003 13.0964978 10.2785736 9.7588703 13.0775958 10.6300460 9.2763773 NA TCGA-S3-AA0Z 63 0 NA 629 breast stage iib t2 n1a m0 female 2013 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 3 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9383417 10.2774949 12.2702093 9.9800466 8.0262783 8.9241676 10.7201409 9.7405058 10.2956970 10.8623246 11.2309588 10.1980980 1.0394894 12.6538914 2.1549720 10.9483812 5.2358840 10.0413655 8.0562968 3.6639821 NA 10.4318058 9.1943065 9.9569350 12.3714316 5.0243817 0.7764409 10.3882164 10.6443503 2.8468343 8.6257026 8.0729113 NA 4.8974679 9.8901960 9.9312720 8.4072669 9.4906995 10.0747456 10.4841581 6.3187127 5.3000175 15.3208871 9.1863708 9.4955003 10.9931997 12.3460247 4.4087254 NA 9.9985243 11.1408075 NA 11.2012500 4.6244519 7.0618561 7.3187118 11.2407954 12.0910371 10.1028834 13.0314825 12.7775102 9.2135818 11.1661928 10.9215632 11.0184370 11.3474480 4.8974679 11.7699584 9.3681633 4.5419856 10.2671042 9.2035572 5.3999708 4.4087254 12.2431422 10.0752038 9.8639168 9.7042319 3.6244519 10.4786266 13.7220806 12.1512760 9.9538734 10.1055775 -0.0069614 2.0784000 2.0784000 -0.0073339 1.4547000 -0.0240830 0.0100060 1.3851000 0.6033900 0.0214630 0.0214630 0.0241100 1.5011000 -0.0052870 0.0182430 0.0182430 0.0182430 -0.0065050 -0.0065050 0.0511030 -0.7898400 0.0000000 -0.0150540 -0.0546860 -0.0289010 3.6569000 -0.0538810 -0.0538810 0.0059927 -0.0295270 -0.0030475 -0.0479440 -0.0073339 -0.0091286 -0.0204120 -0.0026322 -0.0026322 1.3851000 0.6180600 0.6193300 0.7637000 -0.7912600 0.0214630 1.5514000 1.4913000 0.7671500 0.7638800 -0.0052870 -0.0181220 0.0182430 0.0182430 -0.7908800 -0.8477900 -0.0065050 -0.0065050 -0.0150540 0.0498240 -0.7898400 0.0190830 -0.8601800 -0.0342230 -0.0546860 -0.0018014 -0.0686630 -0.0538810 -0.8704300 0.7833100 0.0213230 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.799 -0.799 0.783 0.000 0.000 0.000 0.000 1.388 0.000 0.000 0.000 0.000 1.368 0.618 -0.016 -0.780 0.000 0.000 1.491 1.491 0.139 0.139 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.799 -0.799 0.783 0.000 0.000 0.000 0.000 1.388 0.000 0.000 0.000 0.000 1.368 0.618 -0.016 -0.780 0.000 0.000 1.491 1.491 0.139 0.139 8.5812303 13.4207158 3.4989146 9.3417463 5.5525584 11.5108248 3.9463753 2.8468343 7.5915171 9.9800466 NA 10.1392744 5.5734654 10.1845713 11.3119237 4.9936834 7.2905765 9.2326030 10.9785777 8.8692110 9.6341177 8.4975529 11.2050234 0.4544918 9.2060698 12.5059047 2.0394894 NA 10.0879751 4.8468443 10.6770188 13.0934142 7.0129463 10.1211937 10.1769064 9.2301360 4.0692381 2.6244519 1.0394894 -0.5454029 8.2586570 9.6017307 5.7491454 5.8639162 10.5603427 6.4713338 9.7882402 9.4339509 9.5525579 4.3371687 14.8630877 5.1824460 5.5419887 8.1127371 7.4636829 6.7352961 9.2505654 8.2715092 8.2243635 1.4545444 13.2218309 -1.5454029 9.6143972 NA 5.5734654 4.2094144 8.1756249 7.4375191 12.837974 6.872378 8.229313 12.653891 10.249348 11.242224 3.663982 8.555188 9.406539 10.946880 13.466059 11.923913 9.998524 8.415975 NA 7.709555 10.350101 11.94975625 3.81207716 8.35237144 8.88602331 9.63505656 11.16976281 7.50709373 5.71191334 11.23095884 11.51014716 4.77645146 5.73992909 8.25865695 11.61013465 10.22105465 7.20606979 8.56956932 9.31638812 7.18584475 12.41693111 8.40726691 9.64805121 10.49686915 11.25724410 12.66321740 11.55239331 8.67369421 9.09296164 9.03520847 7.53933410 11.20125004 8.31871181 11.87572279 11.24079545 8.41640952 12.75616487 10.09160345 9.56761675 12.92480336 11.30217046 10.40690301 0.03941918 TCGA-S3-AA10 65 0 NA 586 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5764936 8.8726339 11.6837245 9.5022815 8.4514741 8.7353922 9.1919413 10.5460345 11.5090349 12.3243088 11.1853687 10.4060662 -0.2332776 12.0090064 3.0146588 9.6208146 6.3213148 7.4809711 10.3712786 4.8328141 NA 9.2148417 8.2645772 10.1048936 10.6638146 5.1065745 0.3517414 9.8709901 11.2885712 -1.2331081 9.3498082 7.3441539 NA 6.7382693 9.4132841 10.1887902 8.8124851 9.2148417 9.1428509 8.7382690 2.0886505 7.5578887 15.1929902 9.5663309 9.4373817 10.6645709 10.2449895 4.6736186 NA 9.1374128 9.9509810 -0.2332776 10.6165215 6.1154536 7.8726343 6.1065745 10.2205105 12.1501598 9.5048178 11.4597768 12.8131674 5.8001492 10.8598128 11.0334359 10.5211954 11.6685351 4.8752493 11.5896945 10.1777067 1.7667224 10.4051614 10.4606480 3.1556035 5.6122168 9.5956553 11.3403727 11.1710687 10.3694243 2.2261694 5.9366497 13.0310214 11.9105869 9.5014352 9.5123997 0.7849000 0.9223400 0.2773000 0.0417760 0.2570300 0.7494200 -0.3603100 0.3050900 -0.3323400 0.9879100 0.9879100 1.6594000 1.4517000 0.2669100 -0.0928410 -0.0831670 -0.0831670 0.8229900 0.7668100 1.7511000 -0.3374200 -0.3486700 -0.3392600 0.3337100 0.3753200 0.1639800 0.2526500 0.2526500 0.2790300 0.0297820 0.1010700 0.2070600 -0.3274800 -0.6749700 -0.3518800 -0.3275900 -0.4578700 -0.3246900 -0.3323400 -0.3046000 0.2847300 -0.9710100 -0.4384400 0.0000000 0.0000000 0.0000000 -0.0090577 0.2798300 0.8408500 -0.0632670 -0.0831670 -0.0413970 -0.1066700 0.8229900 0.2151800 -0.3471900 -0.3495900 -0.3301400 -0.3241100 -0.5587600 -0.3392600 0.3337100 0.2557800 0.1639800 0.2526500 0.2790300 0.2009500 -0.2988300 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 0.000 0.194 -0.347 0.328 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 0.000 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 0.000 0.194 -0.347 0.328 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 0.000 9.8334874 13.9396608 1.3516849 9.5529951 5.1855891 11.7132663 6.1154536 -0.2332776 9.3924342 6.7497193 4.5480852 7.1761163 1.5741015 10.5587022 10.1352319 3.0146588 7.1676048 10.7125351 8.3441543 9.2695573 8.2477377 7.1242775 11.0305815 3.8960102 7.6675920 10.2834104 5.3516884 -1.2331081 11.1898414 2.7667224 13.0016925 12.6863337 6.6855884 9.4593410 11.0767701 10.3507484 3.8111216 3.4105853 NA 7.4844016 9.1611881 9.5315971 8.4391506 10.4042560 8.1633729 7.9190105 10.3684962 4.2585792 9.8700133 1.9366662 12.3325416 5.3058830 4.1590398 9.8535118 6.2601800 8.7821405 9.5651973 9.4505974 10.7114375 8.5315971 13.9491586 -0.2332776 10.8581609 -0.2332776 9.4444451 3.9366474 8.0659336 7.7004161 12.117388 9.485258 8.612215 12.009006 10.886315 10.711438 4.832814 11.097362 8.985894 11.278478 13.952840 13.480112 9.137413 7.453226 3.159048 8.453226 10.541513 11.025586 1.766722 8.541513 9.254565 9.699678 10.210736 8.970073 7.188791 11.185369 11.257075 -1.233108 5.875249 8.800520 12.821415 11.274025 8.072787 9.944145 8.361050 9.676619 10.311825 8.812485 10.131954 9.951601 11.278725 12.268563 11.182731 9.231271 NA 9.936895 9.920278 10.616521 5.508191 11.415083 10.220510 8.584589 14.164927 10.820991 10.330398 13.036291 11.679989 9.296156 3.976180 TCGA-S3-AA11 67 0 NA 421 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 1 NA NA 1 1 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5616013 9.4560556 11.9482128 8.9049130 8.3510342 9.3272859 11.2845042 9.7370758 9.6607411 14.2192333 11.1386260 10.7745119 3.5298709 12.9326398 2.4144062 9.5367931 7.7212175 8.6303338 9.8948500 13.9157775 1.1513393 13.6388504 5.0582515 10.0928206 11.0600549 6.5573549 -0.1705563 7.1148365 11.2109769 0.4143521 9.2174513 6.4367648 -1.1707187 2.5298709 9.9451279 10.1703967 10.3122419 11.4599286 10.4256237 11.4475900 2.2888605 12.3399509 14.7918329 8.9134717 10.7579153 11.4856353 11.0489050 5.5018595 5.8847176 8.3608155 11.5458247 NA 9.5641436 3.7836348 4.0388839 3.4732934 10.0333937 12.3374763 10.6432151 11.6341700 12.8725467 8.2001213 10.5058318 10.3777743 11.0489050 10.8830205 4.7363235 11.1061399 11.9514530 NA 10.5755283 8.3352456 4.6391048 2.9168970 11.0281859 10.3267869 10.4533154 9.2483406 3.2217534 9.2619759 13.1746312 10.8830205 10.6760996 10.0576514 -0.00277070 0.66882000 0.66882000 -0.00325070 -0.02013800 0.00000000 0.00055459 -0.00193990 -0.00679470 0.01810300 0.01810300 0.01810300 0.00000000 0.00000000 0.00499690 0.00499690 0.00499690 -0.00346270 -0.00346270 -0.00097017 0.00013863 -0.00207840 0.01480300 0.01480300 0.01480300 -0.00899060 -0.00899060 -0.00899060 0.00124810 -0.00277070 -0.00277070 0.03733900 -0.65919000 -0.00678700 -0.00044888 0.00055459 0.00055459 -0.00193990 -0.00193990 0.00638710 -0.00083160 0.00124810 0.01810300 -0.00207840 -0.00207840 -0.00207840 -0.00207840 -0.79779000 0.01880300 0.00499690 0.00499690 -0.07808000 -0.07808000 -0.00346270 -0.00304750 0.00263570 -0.01031700 -0.00270620 -0.00207840 -0.00138580 -0.01836600 0.01480300 0.00221930 -0.00899060 -0.00899060 0.00124810 -0.00636680 -0.01202400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1715086 12.5068233 6.8067133 9.9600045 2.5779001 11.3277845 2.2888605 -0.1705563 9.0546415 7.0678387 NA 5.7952189 4.2217534 10.1831321 10.0455735 2.1513718 6.9740922 9.2238967 10.5423908 10.5441088 10.0823536 7.8434544 10.0968059 1.1513393 8.5624493 10.1692839 3.1513555 -1.1707187 10.6448172 5.3992907 12.2028429 11.8801329 6.9274663 9.6543928 10.0080987 9.4714856 5.4587921 0.8294437 -1.1707187 6.7952189 8.6383983 9.7858101 10.2201403 2.2888605 9.9107509 7.1423164 10.4818308 5.7120757 9.6222243 NA 10.8181186 4.3529986 4.7601730 9.6658394 5.8172088 3.0773626 8.8860718 6.3212878 5.3051680 -0.1705563 13.3276599 -0.1705563 10.8717774 NA 8.8166979 4.7120785 7.5843214 9.0376683 13.443101 5.989305 8.434913 12.932640 10.598032 10.365681 13.915778 12.183959 9.672515 10.531174 12.548716 9.688969 8.360815 8.464245 4.829434 7.191378 11.244383 11.468322 8.288866 8.758692 8.923512 8.098561 10.904458 5.337229 10.435839 11.138626 6.297039 1.999351 7.325289 8.599899 10.276000 10.210436 7.900896 9.498319 10.456056 3.584325 13.084883 10.312242 10.400238 10.393583 11.469453 9.585990 10.582651 8.585990 9.976003 9.940687 4.384022 9.564144 6.038888 11.436070 10.033394 7.341187 13.629272 10.001861 9.885394 12.870237 11.372949 10.428882 -1.170719 TCGA-S3-AA12 82 0 NA 574 breast stage iiia t3 n1a mx female 2013 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 2 1 NA NA 1 1 1 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.44088308 9.08447491 12.17270339 8.92347398 8.40327454 8.49625341 11.02092141 8.37374477 9.91544471 12.67809178 11.37107843 10.21687945 2.67118013 13.82101718 3.29266397 7.18505183 5.91324607 8.29940769 9.21390666 13.37141199 -0.02929357 15.46852213 NA 10.27506689 11.77244102 10.10515895 1.55571801 8.05021761 9.08967372 -0.02929357 8.33048221 5.60008833 NA 2.97072484 9.82637990 9.52244088 10.09614613 11.49036891 9.12301741 10.79886916 NA 11.18656896 14.62245709 6.28007291 11.47256981 11.47778396 10.48050769 3.77808239 NA 7.75209225 8.47654411 NA 9.82326214 10.75822713 3.77808239 3.61459207 9.39594857 11.86137693 10.09291356 10.22635138 12.77314805 7.86555018 10.69524648 10.48313729 10.69609895 10.98928060 4.43016482 11.17071163 12.62111129 -0.02929357 10.29435045 8.50795119 3.50179579 3.29266397 10.47306725 9.80520377 10.02330069 9.95870713 0.97070643 8.06349000 11.65679541 9.54153710 10.09679183 9.91251395 -2.9091e-03 -2.9091e-03 9.1299e-01 5.8309e-03 3.7508e-03 9.3098e-03 -1.7803e-02 2.4969e-03 -9.6703e-01 3.6569e+00 -9.7764e-01 1.7732e+00 -1.9399e-03 -1.9399e-03 -2.3402e-03 -2.3402e-03 -2.3402e-03 1.0006e-02 4.3992e-05 0.0000e+00 7.7245e-03 4.1593e-04 -1.3127e-02 -1.3127e-02 1.1679e-02 -7.5682e-02 3.6569e+00 -5.9135e-02 -3.0813e-02 -2.9091e-03 -2.9091e-03 5.2749e-03 5.8309e-03 9.3098e-03 1.8943e-02 -1.7803e-02 -1.7803e-02 2.4969e-03 -9.6703e-01 -9.6703e-01 -1.3858e-03 1.2934e-02 -1.0070e+00 -4.7079e-03 -4.7079e-03 -4.7079e-03 -6.0904e-03 -1.9399e-03 -1.9399e-03 3.0522e-03 -2.3402e-03 -9.5855e-01 -9.8718e-01 1.0006e-02 4.3992e-05 4.3992e-05 0.0000e+00 1.0285e-02 -2.4251e-02 -1.0347e+00 -1.3127e-02 1.1679e-02 3.7465e-03 -5.1856e-02 -5.9135e-02 -1.6429e-02 -1.1335e-02 -1.6154e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 7.56692244 12.05753235 7.80678288 7.89851070 2.67118013 11.45152285 1.97074324 -0.02929357 8.81465360 8.30388803 -0.02929357 7.27451327 -0.02929357 10.73601871 9.41056350 1.77808239 4.39699516 8.63429086 10.76352295 11.80914872 9.13177621 6.99310029 10.02737041 1.29266397 9.99656430 10.43067647 4.32828357 -1.02914635 10.85604769 4.25613508 11.81563454 11.72833100 5.71219956 10.32277611 6.71219956 9.80203986 0.97070643 1.29266397 NA 1.77808239 10.21806683 9.48050769 9.58452211 -0.02929357 7.51039549 6.99310029 10.41833249 6.80362228 9.61097757 NA 11.50016319 5.34577247 4.05819526 9.94377704 6.05628438 3.67116880 9.00553164 6.88959644 6.84724907 NA 13.61278435 NA 10.49184228 -1.02914635 6.81622209 3.21865719 8.14815216 6.30164983 13.727212 11.177137 9.046212 13.821017 9.824042 10.811117 13.371412 12.729997 9.443423 9.957847 11.936517 10.879876 7.752092 8.272229 1.778082 7.026015 10.549577 10.7837121 6.6918314 9.1874785 10.2595988 8.4864324 10.4699756 5.3801234 5.5253203 11.3710784 7.4178162 0.5557180 5.9707317 6.9017068 10.2853159 9.8426379 10.7450832 8.8209196 10.6480118 4.7256212 11.3089537 10.0961461 10.4198813 10.0955001 9.4178158 8.5234016 10.6519710 7.9931003 NA 8.2469035 5.0581953 9.8232621 5.1000147 10.1582889 9.3959486 7.0421945 13.8869853 9.9321824 9.6685689 12.0880511 9.9487280 9.6458076 0.9707064 TCGA-S3-AA14 47 0 NA 529 breast stage i t1 n0 (i+) cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 3 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4802924 10.2953504 12.0904538 9.6999994 8.4532933 8.5145969 10.8475973 9.3005166 10.1569409 13.8103359 11.1551595 10.2758102 3.1725195 16.1414816 3.8729666 9.8642659 5.1725235 8.6340018 10.5861504 12.7922839 -0.8275125 12.6955942 3.9798790 10.2003593 10.4983900 6.8163783 NA 8.4109270 9.6931411 4.1267169 8.8572710 7.4109270 1.7574927 4.7872339 9.9382229 9.9636852 9.8884844 11.3418211 10.3580173 11.3276568 2.1725195 11.4694386 15.0286804 9.1275474 9.9798693 11.5709989 11.0297258 4.7574874 6.3721947 9.1062130 11.7111963 -0.8275125 10.9444244 5.4393073 5.2810454 4.8163795 9.6401280 11.6616177 10.0958499 13.0224161 12.2934082 7.2599852 10.6965743 10.5756303 10.5134851 11.4151011 5.1725235 11.3703534 12.6192180 1.4944668 10.3171806 9.0398011 4.8522836 5.0054135 10.4711578 9.8598981 10.1150369 9.6492686 2.4944412 8.8431786 13.5797901 12.3850188 10.1383066 9.6763482 0.00756090 0.00756090 0.01034600 0.00000000 0.02587300 0.04917600 0.02579700 0.00283520 -0.68675000 -0.01182600 -0.01182600 -0.00437070 -0.00648610 0.00047658 0.00158620 0.00158620 0.00158620 -0.00145940 0.01550800 -0.71287000 -0.00049382 -0.02282100 -0.07101300 3.48440000 -0.07542000 -0.10757000 -0.10757000 -0.10757000 -0.03184500 -0.07368600 0.00756090 -0.66878000 0.00000000 -0.03783900 -0.65776000 0.03530300 0.03530300 0.00283520 -0.67026000 -0.69690000 -0.02843200 -0.72337000 -0.67422000 0.03431600 0.00072812 -0.68529000 -0.02432800 0.00047658 0.00047658 0.00158620 0.00158620 0.00158620 0.00158620 -0.00145940 -0.00016863 -0.00016863 -0.65711000 -0.00049382 -0.02282100 -0.72310000 -0.07101300 -0.74086000 0.01536900 -0.10757000 -0.10757000 -0.03184500 0.01229800 -0.07995000 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 -0.701 0.000 0.000 -0.137 -0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 -0.701 0.000 0.000 -0.137 -0.137 9.4486468 14.1294430 6.8163783 10.7357186 2.3279460 10.9526520 0.7574500 0.1724875 8.7687120 9.2901654 -0.8275125 8.3006715 2.8729666 9.5000750 9.4899350 2.8729666 8.1697021 9.5123725 9.9373940 11.8289472 10.5733485 8.2439846 10.6941228 2.8729666 9.5344661 10.1704076 7.6113140 NA 11.9885060 3.7574820 12.6592317 12.6170197 8.5669852 9.0536362 7.8764261 9.5333694 8.4717305 0.1724875 0.1724875 0.7574500 9.1907225 9.8484794 10.0605045 3.7574820 6.7992531 7.4854051 10.3721947 5.7872313 9.3880554 -0.8275125 11.1230783 4.3018071 4.4579226 9.0492082 6.4670512 5.0305038 8.4532933 7.2386121 7.2966437 0.7574500 13.5057476 0.7574500 10.1397487 NA 7.5562263 5.2810454 7.4671433 9.2045682 13.359758 5.172524 9.363582 16.141482 9.821779 10.831180 12.792284 12.593798 9.140498 10.746643 13.111918 10.209383 9.106213 9.810958 1.494467 7.443985 10.597214 11.4480649 6.7423782 8.8289473 9.0054123 7.7121466 10.6142268 6.9004430 7.7612367 11.1551595 6.0054135 5.4763039 5.5300739 7.0376370 11.6790779 10.1682895 8.9021432 8.9701838 11.6948587 6.3323929 12.0781482 9.8884844 9.8642659 10.4316772 10.5129289 10.3555374 10.9489554 9.4602347 -0.8275125 9.9618849 6.7798533 10.9444244 7.5212502 10.5366461 9.6401280 7.7461696 13.7485933 10.1440659 10.2513404 12.9822905 10.9946948 9.8307339 2.3424410 TCGA-S3-AA15 51 0 NA 525 breast stage iib t2 n1a cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 2 4 NA NA 3 5 2 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3578513 8.8221323 11.7651033 8.7927883 8.9969977 9.2279420 9.0089560 9.8240676 10.9503636 11.3931493 10.8818778 10.2682996 2.0883791 10.8201944 1.6029794 11.2209821 7.4708606 9.9814754 10.2117730 8.1939250 -0.7190437 9.8432781 6.8279295 9.8594933 9.1405703 5.8201943 0.8659980 10.6374876 10.7516945 2.4509605 8.2410374 7.2583154 NA 9.3185826 9.7322468 9.4534633 8.9727791 9.9840741 9.3336037 10.6057788 1.8659980 7.5571604 15.4121692 8.6648263 10.2154637 10.5670157 10.4212264 5.4307837 NA 9.5675934 11.4621879 -0.7190437 10.4892701 6.9883950 7.2810361 5.5478230 9.4904891 11.7049394 9.9961397 12.0407158 12.7751412 7.7768909 10.2468199 10.0531688 10.7020485 10.8231002 4.6029616 11.1300498 9.3908663 -0.7190437 10.6625786 8.9410315 4.1936850 7.5050374 10.0899998 9.7476220 10.2604609 9.0835519 3.6029675 7.6560751 13.0476681 13.2546433 9.9140309 10.4917070 0.0122520 0.0122520 0.0955650 0.0226400 0.0973080 -0.0654930 -0.0328060 0.0088072 0.0088072 0.0124310 0.0124310 0.0124310 0.0000000 0.0000000 0.0096428 0.0096428 0.0096428 -0.0024397 -0.0079496 -0.0635170 -0.0627110 0.1330800 -0.0174750 -0.0174750 -0.0174750 0.0085287 0.0085287 0.0085287 -0.0477480 0.0122520 0.0122520 -0.0518450 0.0226400 -0.0631140 -0.0636510 -0.0328060 -0.0328060 0.0088072 0.0088072 0.0088072 0.0329000 0.0159300 0.0124310 -0.0193980 -0.0193980 -0.0193980 -0.0761810 0.0000000 0.0000000 0.0096428 0.0096428 0.0202570 -0.0013555 -0.0024397 -0.0079496 -0.0079496 -0.0635170 -0.0654120 -0.0318510 -0.0479820 -0.0174750 -0.0174750 -0.0631150 -0.0358670 0.0085287 -0.0477480 0.0171790 -0.0169250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.8962055 13.7836810 2.0883791 10.1131345 5.6560759 11.3892334 8.3921714 1.8659980 9.1743373 8.8085128 7.1636789 9.2632164 4.8045957 10.5939186 9.7728887 3.9248885 10.0533502 9.7125332 8.5265884 9.9892574 8.9924790 7.3947782 12.0648524 3.1879261 8.6840476 10.5681708 4.8356260 NA 11.1413467 4.1390192 13.1263297 12.8688132 8.3711480 9.6429795 9.3254298 9.8201944 4.1390192 2.6029557 0.8659980 -0.7190437 9.6264410 11.1083784 8.2753889 6.2235500 9.2094504 7.9605158 9.6029638 5.3895599 10.1841644 5.6029646 11.9251173 4.5664377 5.0089574 9.3981334 7.8452994 11.8683444 10.2359589 9.5218269 13.9709791 1.8659980 13.4932280 1.6029794 10.8036172 NA 9.4459427 7.0225032 7.5431308 8.3281597 11.945927 7.984939 8.742515 10.820194 10.217674 10.823100 8.193925 11.166732 9.571054 10.144448 14.136634 11.686443 9.567593 8.438383 3.528959 7.629764 10.046736 11.274682 4.235229 8.110758 9.255450 7.808512 9.629465 9.492924 8.955228 10.881878 11.257958 4.281038 6.126525 9.029832 11.913804 10.961395 8.077335 8.948147 9.530149 10.242485 12.303740 8.972779 10.172060 10.384979 9.831782 10.751695 10.417386 8.709396 NA 10.100145 12.594911 10.489270 7.139017 10.999423 9.490489 7.430935 13.849348 10.112343 10.353168 12.608448 11.763087 9.574507 6.139017 TCGA-S3-AA17 64 0 NA 424 breast stage iib t2 n1mi cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 NA NA 1 4 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1284784 8.7460487 11.0708883 9.6558509 8.8621981 9.6910963 10.1228778 9.3005754 10.9836618 6.5956633 10.5654278 10.2199798 1.7947693 12.8211144 3.3797318 8.8648847 6.3946770 8.8621981 10.7791824 11.8764138 4.6021183 12.8443572 6.3416585 9.3847052 10.3862862 7.5124402 0.3797318 10.2397581 8.8418879 0.7947693 9.0673938 7.0939721 NA 6.2293918 10.0102969 9.9104579 8.6292349 10.8185183 9.8581590 11.3785518 1.7947693 11.4832328 15.1297006 8.2409788 10.6569944 10.3000792 10.8591699 4.3493511 4.2210264 9.0638906 10.8725810 -1.2052307 10.2402961 6.7547659 7.8473318 6.1610855 9.7727593 11.6051347 10.1908335 10.1929732 13.0676852 8.4313885 11.2233858 10.6573819 10.5662534 10.7659482 5.2377090 11.4313885 12.3952576 NA 10.1870813 8.7562137 4.4731180 7.9521110 10.1719744 10.2241707 11.2038896 9.5404382 1.7947693 7.6682078 12.8258620 12.1668127 10.0307782 9.3693574 -0.5022500 0.4895800 1.0314000 0.0262330 0.0723960 -0.0673240 0.0114000 0.0111210 0.0160060 0.0855100 0.0855100 0.0855100 0.4737500 -0.0044312 0.7648500 0.2902400 0.3185100 0.0230050 0.0331270 -0.0149160 -0.1919900 -0.5013100 -0.5099300 0.0157270 0.0157270 -0.0182160 -0.0182160 -0.0182160 1.1416000 -0.5232900 -0.0055375 0.0311550 -0.5075300 -0.4871200 0.5102000 0.0114000 -0.5146000 -0.5184600 -0.5024500 0.0343020 0.5816600 -0.0114730 -0.5116600 -0.4759600 0.0000000 0.0000000 0.0000000 -0.0044312 -0.5197900 0.2559000 0.2902400 -0.5066000 -0.5066000 0.0230050 0.0331270 -0.5169200 -0.5075300 -0.1919900 -0.5013100 -0.5033900 -0.5099300 0.0157270 0.5070700 -0.0182160 -0.0182160 0.5105400 -0.5206100 0.0375000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.041 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.041 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 9.9540046 12.2498342 3.8822224 9.6933653 6.7076532 11.5275673 7.3608181 NA 8.6651287 6.8391584 NA 6.9643386 3.8822224 9.8642137 9.5047094 3.7016599 10.2078628 9.0732134 10.2283494 10.6105474 9.2710951 8.0592065 10.2377073 4.1870789 9.6918531 10.3416584 3.4386255 NA 11.0250846 3.1166974 12.5845013 12.2325160 7.4350084 9.3493527 10.8996902 9.5454709 3.7489549 3.3183313 -0.2052307 0.7947693 9.1849329 10.3956060 9.8017911 2.4952091 8.7923810 8.5429568 9.4422224 7.1301546 10.0842065 NA 11.5575612 5.5891792 6.8446129 9.2337637 5.7982527 8.9508469 9.6804603 9.7343431 10.8188647 -0.2052307 13.8531785 NA 10.1676290 NA 7.9188853 4.8391584 7.4094741 8.9019810 12.407908 6.033170 8.286617 12.821114 10.435009 10.898707 11.876414 11.146807 9.396423 10.695253 13.089528 11.417502 9.063891 9.152316 2.701660 7.047429 12.506753 10.882227 8.288619 8.197776 8.845973 9.036747 10.017686 9.459211 7.402095 10.565428 6.944511 5.286619 5.318324 8.315442 9.887521 11.261605 8.206275 8.978399 11.959671 9.007868 12.302312 8.629235 10.345030 10.768820 11.853263 10.140169 10.894769 8.435009 4.438619 9.615190 10.161633 10.240296 4.522684 11.219788 9.772759 8.241847 13.908788 9.804592 9.602119 12.636820 10.538336 9.936871 4.964690 TCGA-UL-AAZ6 73 0 NA 518 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 1 NA NA 2 2 1 2 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.1489727 8.4031876 10.7877066 6.9971953 9.6794877 9.3064443 9.7726409 10.3463659 9.7264760 15.1637193 10.8389168 10.6664347 0.9971840 17.2314214 2.1347138 8.5866593 6.2751803 8.2432230 5.3334774 12.5564767 1.4826418 13.2799362 1.9971840 10.3145762 10.2149107 5.7413564 NA 9.1499871 10.9534262 0.2602666 9.8644740 6.8749396 2.8451889 2.5821465 9.0782792 9.9704621 8.8822814 9.6511150 8.8798384 10.1130192 7.2375092 11.8783092 13.4550891 7.3232656 10.1540368 9.7798659 10.1464343 6.0846575 8.0306180 7.5791492 8.9629796 NA 10.0734764 9.4938492 3.4826160 3.7627315 9.1150980 11.6314618 9.9196310 10.5799018 11.8957966 8.6864946 10.5787724 9.9261576 10.1919521 10.4259741 3.7196654 11.0503066 12.1349549 1.8451889 9.9531357 8.2621071 3.2602365 3.0675871 11.3256458 9.0931196 10.9276369 8.7877067 3.4301514 5.9231944 10.8074455 9.8288191 9.8363990 9.2095701 -0.6074600 0.8689600 1.1410000 -0.5895800 -0.0059225 0.6168300 0.4480400 0.5612000 0.0000000 -0.6347900 -0.6347900 0.5774100 0.4724200 -0.0389570 -0.6071700 1.6011000 0.5865400 0.5331300 0.5768700 -0.6330900 0.5315500 0.4238900 -0.0136480 3.6569000 3.6569000 -0.0451990 2.9996000 1.0078000 2.6820000 -0.0486140 -0.6074600 -0.1625200 0.0252800 -0.0214800 -0.6331900 0.0285120 0.0285120 0.5352400 0.0000000 -0.0141980 0.5262900 -0.0161790 -1.2929000 -0.0280700 -0.0280700 -0.0280700 -0.0727800 -0.0616600 -0.0616600 -1.2506000 1.0830000 -0.6189000 -0.6377200 0.5331300 0.5452700 0.5263000 -0.5966000 -0.6190900 -0.6278700 0.5069300 -0.6461000 -0.5904600 0.0323110 -0.0451990 -1.1815000 0.4636900 0.5022400 -0.6421500 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.614 -0.614 0.000 0.000 0.000 0.000 0.526 0.000 -1.293 0.583 0.000 0.000 0.000 0.000 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.614 -0.614 0.000 0.000 0.000 0.000 0.526 0.000 -1.293 0.583 0.000 0.000 0.000 0.000 6.9184411 12.3624241 6.5270156 8.1830617 2.9413129 11.7793744 0.2602666 NA 9.5776422 8.0931196 0.2602666 5.5332487 3.3191265 11.3772233 9.5371295 4.7413537 3.9231967 9.2611685 8.3529867 11.7066237 9.9066204 5.7520822 10.5022128 -0.6739229 8.1751129 9.1130193 3.1988241 1.8451889 10.5757567 3.5821585 12.7982569 12.6743863 6.4631696 9.7974480 11.1953947 11.1145786 3.4301514 3.8847249 NA 3.1988241 8.4826220 12.0479962 10.0841275 2.9972021 10.1467951 8.2240890 9.8551762 6.5394535 10.0665108 NA 10.1766068 1.4826418 4.6294615 9.6576263 6.4783652 2.1347138 8.1015319 7.6864942 6.0761465 2.1347138 14.4039849 -1.3248164 11.7475673 NA 9.6871932 4.3191265 9.1681218 7.5851601 13.230298 8.456627 8.805838 17.231421 9.290897 10.916059 12.556477 12.196745 9.435155 10.145926 12.093515 10.676675 7.579149 9.354747 3.675263 10.356066 11.272389 10.4890483 6.1182102 8.3227254 9.7244351 7.7520829 10.4962718 7.0589712 9.5791490 10.8389168 7.2375092 NA 8.5851601 9.0520004 8.6766754 8.4793983 7.1305942 9.1150980 8.2317732 3.6752627 12.7284854 8.8822814 9.8675600 10.5266258 11.1578231 8.7237541 10.2550544 6.7413564 4.1346974 9.1583673 4.9971930 10.0734764 3.8451889 11.3218259 9.1150980 6.4631696 13.1744902 11.1547948 10.5093431 10.4950470 11.2505701 9.2536398 -0.3248164 TCGA-UU-A93S 63 1 116 NA breast stage iv t4d n3b m1 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 5 NA NA 2 6 1 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4669330 8.3178770 10.3389862 6.4401333 9.0170581 9.0665723 9.3063816 9.4371243 11.3191035 12.8579855 9.2162371 9.9287765 1.5332643 18.5381733 3.1182102 11.7665624 5.5993327 7.6573635 1.8551525 11.5183728 -0.4667357 10.4513602 1.5332643 10.3059776 10.4954155 6.0410370 2.9926778 10.6411003 11.3280643 NA 8.3534212 8.5275959 NA 2.7031672 9.4565698 9.3146020 8.9510950 10.1442672 9.0762742 9.9071950 1.5332643 8.6153913 13.6741520 6.1132379 8.6339049 9.1049949 9.8819706 5.8907944 1.5332643 8.2406015 11.2843680 NA 10.3755927 -0.4667357 3.9926778 2.9926778 10.2388747 11.7448265 9.3047319 9.4461317 11.8367378 9.1896672 10.1479523 9.4535952 10.1182049 9.5735321 2.1181936 11.8711430 6.3912230 NA 10.6625254 6.7811695 1.5368487 2.7031672 11.0039013 9.9201827 9.8255640 9.0150417 2.7031672 9.4595384 12.1502506 11.3993622 9.6867945 8.5019092 1.1558000 1.4312000 1.3499000 -0.0128510 0.4472800 -0.0328600 0.8942700 0.0245480 -0.4495400 1.3193000 -0.8992400 0.8538300 1.7339000 0.0000000 -0.0335410 0.4099400 0.4099400 -0.4387500 -0.4482500 0.8603600 -0.4442600 0.0139110 0.6651200 3.6569000 -0.3743700 0.3399900 -0.4542600 -0.4504000 0.0465590 -0.4090400 -0.0070576 0.0286220 -0.0066653 0.5318600 -0.0283550 0.4439200 -0.0049844 0.0245480 -0.9553300 -0.5028400 1.3042000 -0.0135890 -0.9643000 -0.0947240 -0.0630110 -0.0630110 0.0331270 0.0000000 -0.4783900 -0.4515800 0.4747800 0.4099400 0.3805600 -0.4411300 0.0076392 -0.4241800 0.8270600 -0.4314800 -0.4576800 0.0291840 -0.4148700 -0.3906300 -0.4573600 0.4735800 -0.4274600 0.0044411 -0.0797420 0.0609360 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 0.340 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 0.000 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 0.340 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 0.000 6.5444699 10.9099105 4.7031672 8.0130228 0.7349155 10.9526760 0.5332643 NA 9.6867945 5.6207066 NA 4.9595059 9.7776063 11.3235909 9.3787325 4.9255580 4.9595059 8.5019092 9.5219270 10.8192225 9.7144071 6.6625260 12.1612322 -0.4667357 4.5332394 9.5735321 NA NA 10.8295850 1.5332643 13.5536147 12.0930974 6.4036069 8.9967667 11.3755927 9.3896679 0.5332643 2.5332394 -0.4667357 3.4401283 8.7056701 11.2835306 8.0685177 2.1181936 10.5616803 11.1414972 10.0849507 6.1770986 9.1087816 NA 10.1182049 3.2336887 3.3405908 10.4023426 6.6392553 4.1182019 9.3989756 7.3724463 7.4280603 0.5332643 13.5710467 NA 11.2193052 NA 10.7536207 5.2881297 7.8641595 10.0587632 11.0752537 8.2645613 8.8686328 18.5381733 10.4691441 12.5547429 11.5183728 9.1644195 9.2492045 8.8047054 12.9904950 9.8663977 8.2406015 10.1021485 -0.4667357 7.3146023 10.4005212 10.0868717 6.4757561 8.6521835 8.4610202 8.8023690 8.9945172 4.4401350 4.1182019 9.2162371 9.7704523 2.1181936 11.3649455 7.8633971 12.2537004 8.9039297 8.0008479 9.4874387 6.5885243 3.9255627 10.4690631 8.9510950 9.8035377 10.4874387 9.8347385 9.7341411 10.2872947 7.7279994 0.5332643 10.8918167 5.8370223 10.3755927 3.9255627 9.5830909 10.2388747 7.3976139 13.9316521 10.5176608 10.7218312 11.8017844 11.3830384 8.9906234 0.5332643 TCGA-V7-A7HQ 75 0 NA 2033 breast stage iiia t1c n2a m0 female 2009 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino NA NA 2 3 NA NA 1 1 3 5 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.39337887 7.64934960 10.16944415 4.65817149 9.43761268 7.36671038 9.28930631 8.30062162 10.64380732 13.10606321 10.98580843 9.37610086 3.20751808 13.09086828 1.88557436 11.78871279 7.91164665 7.47054663 8.85521048 11.69508432 -0.07643243 14.10045972 6.54854914 11.30092798 9.86572368 4.05550804 0.30065091 10.18173555 9.80742512 0.30065091 8.73316348 4.91532968 NA 2.47053687 7.79647641 8.62029388 9.09990321 9.02172067 8.01829812 9.15548994 12.78846164 12.03638914 13.34629596 3.38893343 9.62367632 10.34159621 8.93905758 4.79247537 7.15237105 6.04208834 9.49783827 -0.69946623 10.29143469 4.97304639 2.88557436 4.69294044 7.55800966 11.45733676 10.64713531 11.97547593 11.23504962 9.34638120 10.08689122 10.09503749 9.52703377 9.12080059 1.30059234 10.64990282 11.55032767 1.88557436 10.12717011 8.00106134 4.58602610 1.30059234 10.90887647 8.21948462 10.35047017 8.79647673 2.30062162 9.18173568 12.90157983 12.10212791 9.64047163 9.81138577 0.0000000 0.0000000 0.0000000 -0.1074900 -0.1777400 0.0096714 0.0091705 -0.0065050 -0.0761450 -0.6969400 1.4181000 1.4181000 0.0441480 0.0176840 0.0154470 0.0154470 0.0154470 0.0294660 0.0294660 -0.5813700 -0.0565770 0.0034687 0.0465590 0.0465590 0.0449530 -0.2446000 -0.2453300 -0.0957800 0.0356230 0.0237060 0.0000000 -0.0060904 -0.1074900 0.0096714 0.0139110 0.0011070 -0.0120100 -0.0065050 -0.0761450 -0.0362650 0.0625080 0.0237060 -0.7116700 -0.0254550 -0.0254550 -0.0254550 -0.0184900 0.0176840 0.0176840 0.0154470 0.0154470 0.0154470 0.0154470 0.0294660 0.0294660 0.0294660 -0.5813700 -0.0565770 -0.0023179 -0.7186500 0.0465590 0.0465590 0.0327040 -0.2446000 -0.0957800 0.0354870 -0.0011087 -0.7171100 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.697 0.000 0.000 0.000 0.000 8.5149408 13.0007362 7.6756607 9.2893063 2.3812834 10.5167612 3.1079724 -0.6994662 9.8590423 7.3450157 1.3005923 6.1335122 3.2075181 10.1343023 9.3076489 2.4705369 5.8241823 7.4655289 10.3874212 13.5723035 9.0982021 6.0819808 9.4234496 0.3006509 10.5679935 9.9372462 7.3174298 NA 10.7100126 2.1079891 13.6713090 12.4615960 7.6089607 8.8986742 7.5580097 10.7682272 3.3006216 0.3006509 1.6225556 9.2239491 10.3153396 12.2230202 9.2165009 1.8855744 8.0529017 10.7804019 10.5039696 6.1335122 10.0745849 NA 9.2577237 NA 3.2075181 9.3234610 7.9776365 4.3880862 9.6426963 7.4503683 9.2402008 0.8855744 14.0369707 1.6225556 11.1366720 0.8855744 7.6756607 3.4705499 7.9153315 9.5064149 14.072505 6.207512 8.500294 13.090868 9.402597 11.060094 11.695084 10.308350 8.715497 9.587179 12.071492 9.827121 6.042088 9.971278 3.001064 7.195439 8.818291 9.739413 4.510076 8.177138 8.868578 7.465529 9.188314 6.490447 8.909800 10.985808 7.874269 2.300622 8.095037 6.163074 8.733163 9.975697 8.839780 11.732902 5.490445 4.001064 11.775810 9.099903 10.517974 10.809407 10.276470 9.570917 10.164034 6.133512 NA 9.966437 5.388083 10.291435 6.081981 10.012289 7.558010 7.534241 14.282768 10.960172 9.396019 11.841234 10.426035 8.432478 2.107989 TCGA-W8-A86G 66 0 NA 347 breast stage iia t2a n0 (i-) mx female 2013 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 NA NA 3 3 3 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.79286056 8.72409121 11.27850789 7.22859073 8.68136598 9.17036250 10.77265001 9.54319523 11.27409093 11.49276576 11.13334890 9.82567657 4.38424326 13.27609404 2.38424326 10.51492882 7.69959674 9.42465550 10.07201466 12.53733267 3.78278596 13.50347721 7.36775283 9.79290691 10.75849041 5.44837239 NA 7.38526536 7.73216471 3.38424326 9.60340974 7.21021156 -0.07521599 4.01227367 9.59811877 9.54502952 9.19510493 11.48275195 10.07646049 11.01094589 4.44837239 12.03708627 14.64982972 8.08581553 10.18866574 9.87682280 10.53075209 5.13426202 4.38424326 8.03594551 11.91668578 NA 10.37344224 3.96920576 5.89059504 3.56866451 9.67384100 12.09473470 10.62568282 12.87500103 12.77528957 8.62351428 10.59236481 10.47218626 10.85702443 10.71637956 3.83170500 11.87116773 11.79786924 2.38424326 10.31980826 8.69464762 5.17747535 2.38424326 9.96509942 10.31390326 10.19452086 9.08215649 4.44837239 9.64590895 12.78288783 13.14903752 10.07074177 9.89563466 -0.00470790 0.90030000 0.45462000 0.00027728 -0.00802440 -0.01119800 0.26012000 -0.01050800 -0.01050800 0.27206000 0.27206000 0.26301000 0.00652620 -0.00354900 -0.00781030 -0.00781030 -0.00781030 0.01950300 0.01950300 -0.01615400 -0.00716340 0.47838000 0.01014600 0.00489150 0.00489150 0.28010000 0.28010000 0.28010000 0.28074000 0.00968190 -0.00470790 -0.00526100 -0.00802440 -0.01119800 -0.01119800 0.26012000 0.26012000 -0.01050800 -0.01050800 -0.01050800 0.24840000 0.24840000 0.27206000 -0.00249380 -0.00249380 -0.00249380 0.00305220 -0.00354900 0.00763920 -0.00781030 -0.00781030 -0.00781030 -0.00650500 0.01950300 -0.47681000 -0.49152000 -0.01615400 0.00346280 -0.48165000 -0.48197000 -0.48092000 0.00489150 0.00166420 0.28010000 0.28010000 0.27584000 0.24093000 -0.02466100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.900 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.900 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 0.000 8.23769277 12.51656576 7.49466521 10.62351437 2.73216064 11.18837230 1.92482200 1.24671210 9.07582621 8.89059382 -0.07521599 7.13912871 3.62524711 9.52006723 9.96235670 2.24674250 7.99089872 9.76085997 11.27630107 10.59944333 9.50578417 7.75135794 10.88662109 2.24674250 9.95271562 9.95547686 5.59723617 -1.07521599 10.51071117 5.53951866 13.22559122 11.89940353 7.45619093 10.19510505 8.24448181 9.73618441 5.73216335 -1.07521599 1.24671210 4.53951866 9.68968128 10.35107439 10.10534048 7.52843614 10.57917270 8.23314893 9.71678654 4.67969965 9.72651808 -1.07521599 11.83113664 0.92478401 5.53951866 9.60168352 6.68396588 2.92480300 9.67384100 6.62525003 6.50977184 -1.07521599 14.32848750 -1.07521599 10.28236173 NA 7.86732446 6.44050876 7.70944436 8.41264986 12.473577 4.807453 8.450330 13.276094 10.314441 10.192182 12.537333 12.595355 9.042076 9.535834 12.492409 10.195689 8.035946 8.642486 1.509797 7.855547 10.499403 10.8555470 5.5097718 9.0002888 8.3594377 7.0897164 10.0482004 6.1047183 6.0540931 11.1333489 8.2624317 5.2285917 9.8533281 6.1322149 10.9496031 10.5677639 8.3214145 9.6278481 9.5596207 4.0122737 12.2788372 9.1951049 10.3288868 10.4439545 11.3508123 10.2222992 10.3563073 7.8819117 NA 9.6611186 5.6796968 10.3734422 6.1342641 11.5839426 9.6738410 6.6459091 14.5013531 9.7990227 10.5367566 12.3954686 11.0362714 10.5256518 0.5097465 TCGA-WT-AB41 NA 0 NA 1611 breast stage iib t2 n1mi mx female 2010 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 5 4 NA NA 1 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7422535 7.3298708 9.1868759 4.2424043 9.5763084 8.8595690 7.7969968 9.6058125 11.8438690 13.7722450 11.8653747 10.0303103 1.6574571 12.6775571 3.4647989 9.5792861 4.3013023 7.4388052 7.0668362 11.5142598 NA 14.2162247 0.6574571 10.5298508 9.2739942 6.0837091 -0.3426344 10.6080012 8.3819590 0.6574571 8.1691980 5.2721539 NA 4.1168804 7.9101108 9.0171948 8.2273007 9.2101144 8.4453476 9.3870661 3.1168804 11.2168224 13.5586893 -0.3426344 8.4123327 8.2758307 8.7554775 5.1168762 8.0368236 7.1492980 8.4022792 -0.3426344 10.0593914 5.7659696 5.8862648 4.4123344 8.5431417 11.7083142 9.6756454 10.5499881 11.8116305 9.4404436 10.3870660 10.5347294 9.3049037 9.1003888 1.2423891 11.6560357 11.7445766 NA 10.1790457 8.0017409 2.2424196 4.4123344 10.9771174 9.0962371 10.5658379 8.4871680 7.5091946 7.2721548 11.8103638 11.4855817 10.0006309 9.2831541 -0.50194000 0.93874000 0.93874000 0.01042400 0.51141000 -0.02972100 0.50116000 0.00833510 0.00833510 3.65690000 3.35580000 -0.00290910 0.01457300 0.01415800 0.00597000 1.04340000 0.98721000 0.01824300 0.00402710 -0.00221680 -0.51424000 -0.52430000 -0.49944000 0.02272500 0.02028400 0.50122000 0.00583090 -0.45544000 0.01399900 -0.50330000 -0.50194000 -0.00173770 0.00624810 -0.47173000 -0.45105000 -0.51784000 -0.51784000 0.00833510 0.00833510 0.00833510 -0.00090348 0.00000000 -0.52981000 0.00903120 0.00903120 0.00903120 0.00903120 0.01415800 0.01415800 0.00597000 0.00597000 -0.52082000 -0.52082000 0.01824300 0.00903120 0.00903120 -0.00221680 -0.52100000 0.93732000 0.01838300 -0.51846000 0.02272500 0.00332990 -0.52971000 -0.45544000 0.04287400 -0.02932200 0.02932500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 0.000 9.9089277 12.0451934 5.2424082 9.1533002 5.1810071 11.5940832 6.9053726 NA 9.9300751 7.5522633 2.6574342 6.3989130 5.0149979 9.9451576 9.9405335 2.4647989 10.0899872 8.3263302 8.8248633 11.3870660 8.6261120 5.0837112 9.6447093 -0.3426344 8.2386460 10.2291979 3.9053702 1.6574571 10.7783311 5.7867270 13.5319464 11.9925564 7.2573577 10.0116947 10.4784220 10.8534325 1.6574571 7.5461884 NA 3.7449038 10.4672133 11.9526402 9.8790324 3.9793760 8.2174343 9.1452854 9.7329245 4.7867270 10.3369254 NA 10.7705362 NA 2.6574342 9.9975959 7.5497754 7.8173169 10.1076255 9.0837101 10.5301201 -0.3426344 14.6711605 NA 12.0774054 NA 6.4388052 4.3013023 8.6991043 9.8898662 14.8108334 5.9972947 7.8373542 12.6775571 10.5254961 11.2447540 11.5142598 9.8046502 9.7594209 9.9725949 12.7685809 10.7521828 7.1492980 9.6361557 -0.3426344 7.6461302 9.1652399 9.843559 4.464799 7.895850 8.092074 7.392155 8.905942 8.623230 8.062587 11.865375 7.108656 1.979367 9.540088 8.560152 7.956653 10.403120 8.343946 10.586704 4.412334 7.771188 11.211780 8.227301 10.491126 10.524724 10.176098 8.677036 10.248968 4.866898 1.657457 9.796139 8.898236 10.059391 4.242404 10.718816 8.543142 7.552263 14.111809 10.102460 9.171173 12.306926 10.108656 9.844797 2.979367 TCGA-WT-AB44 NA 0 NA 883 breast stage ia t1c n0 (i-) mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 1 2 3 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6361979 7.8332665 9.5431869 4.1634182 8.9061071 8.9940021 9.4738210 10.1406947 10.3834632 9.2314602 10.5249599 10.5233640 2.0259147 13.1990887 3.7914494 11.0882273 7.5113384 8.7456424 9.6826936 12.5839493 NA 12.7337880 7.7861324 10.8832703 10.8435345 6.9231516 -0.2960134 12.0337795 9.2508777 0.7039866 9.4044229 6.0259103 NA 2.0259147 8.1427749 9.4588706 9.4250824 10.0538173 9.6435624 10.7741041 9.7429022 8.9847540 14.1356114 5.6130365 9.4096156 9.0031912 9.6726500 4.7483754 1.7039866 7.4113423 11.2528051 0.7039866 10.9719402 5.7263517 4.2275486 3.8739116 9.1918232 11.3768505 11.0162989 12.5231644 13.0891715 7.9986040 10.4259368 9.9530966 9.8255166 9.3278647 -0.2960134 10.9530966 11.9039622 -0.2960134 10.3693191 8.1797166 3.0259147 2.8739116 10.8925720 9.6983366 10.2547300 8.6376740 1.7039866 7.5368735 13.0509124 14.4259902 8.9328018 10.2898846 0.731320 1.855500 1.855500 -0.085633 -0.085633 -0.384590 0.059080 0.014609 0.014609 -0.180550 -0.180550 -0.205060 0.033510 0.033510 0.024689 0.040077 0.040077 0.030029 0.012148 -0.079077 0.384030 -0.744290 -0.182950 -0.199520 -0.202730 -0.226990 -0.226990 -0.226990 -0.198620 -0.721720 -0.775180 -0.021265 -0.085633 -0.384590 -0.403960 0.000000 0.000000 0.014609 0.014609 0.014609 0.396290 0.380270 -0.180550 0.015308 0.015308 0.015308 0.062794 0.033510 0.079735 0.024689 0.040077 0.014663 0.014663 0.030029 0.012148 0.012148 -0.079077 0.384030 -0.744290 -0.740980 -0.182950 -0.202730 -0.163450 -0.226990 -0.226990 -0.225250 0.049256 -0.714970 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 0.536 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.722 1.134 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 0.397 -0.378 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 0.536 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.722 1.134 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 0.397 -0.378 8.1551942 13.0239375 5.7700732 10.2973743 0.4947740 10.7291228 NA NA 9.4935168 7.9279847 -0.2960134 6.5619645 2.2889491 10.0692120 9.8676329 1.2889491 7.7096077 8.8764107 9.2078089 11.5253586 9.3223687 6.3764085 10.0681179 0.4694693 9.9495360 9.9195162 4.2889491 NA 10.5866262 2.7039866 13.4313719 11.6823361 7.6406209 9.3939811 7.6639850 10.3442281 2.5113415 -0.2960134 NA 4.2889491 8.4655346 11.2231280 10.4353022 5.3478393 9.6982942 8.9255702 10.0984459 3.9519141 9.5337058 1.7039866 11.2884760 2.2889491 4.4044195 10.0849528 5.6727648 3.1634182 7.6812630 7.9660780 6.8938075 3.8739116 14.6267534 NA 10.5494732 NA 8.9328018 5.1958358 7.3186928 8.7807989 11.6586775 4.1634182 8.1386112 13.1990887 10.6486952 11.6972754 12.5839493 10.0337795 8.7781248 9.7053913 13.6425520 10.6876894 7.4113423 9.8888584 -0.2960134 7.4787704 10.0259112 11.0979099 3.9519141 8.4420755 8.7318892 5.1958358 9.2895841 6.1958358 4.7483754 10.5249599 8.6523502 3.8739116 6.3621946 4.0516505 10.4951461 11.4272175 7.8838920 10.8782847 4.4588675 4.4044195 12.9063412 9.4250824 11.4117737 10.3242031 10.9322006 8.6898250 10.2973743 5.1634142 NA 10.1293144 5.6581801 10.9719402 7.8537306 10.8600663 9.1918232 7.4044229 14.4786158 9.3639790 10.6589065 12.7332704 10.7517887 10.1354807 0.7039866 TCGA-XX-A899 46 0 NA 467 breast stage iiia t1c n2a mx female 2013 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4389883 9.7057005 11.4621238 9.1914188 8.3608041 9.2429490 10.4548579 9.9131485 11.0858854 9.4544531 11.7424686 10.1565111 2.1146002 13.0640319 3.8646220 10.6930616 6.1629653 8.7077394 10.3138292 12.0015467 4.2097575 12.8396595 5.3830925 9.9511527 10.1708713 4.1146002 NA 11.2085440 10.2240777 4.7426368 8.8983456 7.4880618 -0.3448314 4.6093649 9.7863855 10.2326003 10.0149211 11.7262986 10.0421117 11.2813368 12.8848916 10.2240777 15.4145266 8.9994008 9.8219560 11.4831096 11.0359031 4.8250987 2.7426315 8.9827241 11.3438589 NA 10.9532341 6.2772242 7.3659777 5.5620623 10.5796129 11.7289784 10.3460425 12.9905619 12.9162380 8.0127234 10.7452839 10.6759778 10.7724899 11.2159820 5.2401349 11.4318101 12.1443923 -0.3448314 10.6484637 9.1258303 4.4137972 7.6940904 10.6705866 10.2527585 10.7309849 9.6523510 2.9770967 8.6079128 13.7309849 13.0695264 10.0835317 9.4183839 -0.07093700 0.27537000 0.27537000 0.00110930 0.00110930 -0.00027724 0.35545000 0.00388540 0.00388540 2.21400000 2.79460000 0.29374000 0.00000000 0.00000000 -0.00180140 3.65690000 3.65690000 -0.00332430 0.50109000 -0.01161100 -0.19575000 0.01335300 0.00833510 0.00833510 0.00833510 -0.00027724 -0.00027724 -0.00027724 0.00249690 -0.07093700 -0.07093700 -0.08293400 0.00110930 -0.00027724 -0.00027724 0.05039300 0.13598000 0.00388540 0.00388540 0.00388540 -0.00166290 -0.00166290 -0.36102000 -0.06933200 -0.06933200 -0.06933200 -0.06933200 0.00000000 0.00000000 -0.00180140 -0.01656700 -0.36034000 -0.36034000 -0.00332430 0.00430210 0.00430210 -0.01161100 -0.19575000 0.01335300 -0.34950000 0.00833510 0.00833510 -0.00857660 -0.00027724 -0.00027724 0.00249690 0.00485790 0.00849060 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 0.000 9.982724 13.770174 7.288167 10.580355 6.488062 10.427074 7.331128 1.240131 8.924298 8.820078 NA 9.296718 5.804918 9.977100 9.622398 3.864622 11.260420 9.275391 10.584800 10.224552 9.406155 7.688594 11.584800 4.327594 9.619512 10.697515 6.403365 NA 10.805236 3.513150 12.562438 11.855917 8.213592 10.108957 9.443890 9.543154 4.178731 1.240131 -1.344831 2.655169 9.058184 8.835081 9.643856 6.597686 8.355160 7.646693 10.287712 5.462527 9.443074 -1.344831 11.087191 5.369418 4.804921 9.253382 6.080849 7.236372 10.269421 9.165936 7.995021 1.462524 13.668451 1.462524 10.402525 NA 8.393264 4.763698 7.528616 8.594751 15.584861 5.327598 8.559054 13.064032 10.356478 10.503794 12.001547 11.569183 11.816710 10.619512 13.458294 11.952804 8.982724 8.245759 2.562059 7.143012 11.365117 11.314944 6.396639 8.863406 8.972584 8.158997 10.095324 9.076184 8.554529 11.742469 7.571051 3.240131 6.355612 7.685591 11.741639 10.713163 8.840047 8.996134 11.591993 7.854844 11.366944 10.014921 10.171364 10.022586 11.416307 10.963226 10.449587 8.367699 NA 9.683174 8.754519 10.953234 7.073024 11.074605 10.579613 7.110622 13.964293 9.952661 9.993351 13.020674 11.155266 9.904878 4.537812 TCGA-XX-A89A 68 0 NA 488 breast stage iib t3 n0 mx female 2013 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 4 NA NA 3 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.839820 9.534528 11.042423 8.993458 8.026503 9.329490 9.728550 9.981374 10.594377 9.238779 11.218617 10.311369 5.360923 11.594597 2.917985 10.526234 6.441540 9.092904 9.445456 11.988771 3.165912 12.679010 6.812796 9.628518 10.076588 4.472566 -1.081919 12.619827 10.916569 3.441537 8.984068 7.628785 -1.081919 5.221761 9.880875 9.826371 9.134725 10.336885 9.653535 11.150100 8.527158 9.010736 14.974214 8.262718 9.879428 10.648024 10.310833 5.127431 -1.081919 8.694412 12.431213 NA 10.986421 7.067726 6.962373 5.576190 10.045973 11.685336 10.380481 12.326574 12.593715 8.115196 10.474485 10.296566 10.959980 10.762684 4.561833 11.290028 10.338465 -1.081919 10.838332 8.786801 5.104240 7.016010 10.504818 9.454226 10.000793 9.344244 4.087904 8.399778 13.393649 12.969613 9.765819 9.629646 -0.25898000 0.01284500 0.00478230 -0.25547000 -0.26476000 -0.00216680 0.00908150 0.00000000 0.00060468 -0.52967000 0.01242700 0.00074336 0.01521800 0.01521800 0.01689500 3.65690000 -0.52914000 0.00987850 0.01117200 -0.53151000 -0.25124000 0.02782900 -0.51183000 -0.51183000 -0.51297000 1.57080000 0.06298900 0.06298900 0.03261400 -0.51101000 -0.25898000 -0.25362000 -0.25547000 -0.00216680 -0.00216680 0.00908150 0.00421340 0.00000000 0.00060468 0.00060468 0.00657640 0.00727200 -0.52967000 0.01857400 0.01857400 0.01857400 0.01857400 0.01521800 0.01521800 0.01689500 0.06513500 -0.52978000 -0.52978000 0.00987850 0.00560310 0.02835500 -0.53151000 -0.25124000 0.02782900 -0.51739000 -0.51183000 -0.51183000 -0.52600000 -0.49043000 0.06298900 0.03261400 0.01348500 -0.50791000 0.000 0.000 -0.519 -0.519 0.000 0.000 -0.532 -0.251 0.000 0.000 -0.517 -0.512 -0.512 -0.525 -0.525 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.248 -0.248 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.143 -0.143 0.000 0.000 -0.519 -0.519 0.000 0.000 -0.532 -0.251 0.000 0.000 -0.517 -0.512 -0.512 -0.525 -0.525 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.248 -0.248 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.143 -0.143 10.03432275 13.92246257 3.31029649 10.92990481 3.56183933 11.31029615 1.50294157 NA 8.83981979 10.04790573 -1.08191913 8.29012532 5.59040441 9.74373256 10.68160607 1.91796634 11.07500983 9.09913106 8.76660179 9.31565340 9.43330397 7.71564014 12.17889826 3.67286657 7.17536691 10.48925732 4.40983216 0.91800452 10.59393579 3.44153660 12.47316697 11.87108388 8.43170652 9.84130629 8.77440427 9.41383374 3.31029649 0.91800452 -0.08207184 2.82486966 8.50294117 9.36506193 10.03237185 7.62188264 7.63527844 7.44545607 9.76346884 5.06772475 9.07658849 -0.08207184 11.99546208 4.50294157 4.04725918 9.34536488 5.34491369 6.54003037 10.22745506 10.12377197 10.65649324 NA 13.72603792 1.50294157 10.45955939 NA 6.94034649 6.11765141 7.59393560 9.22061775 13.600170 5.239906 8.694412 11.594597 10.120715 10.278826 11.988771 11.759543 11.126771 10.401794 13.369963 10.305996 8.694412 9.347386 3.239902 6.818845 10.647175 11.496116 6.686163 8.630506 8.489731 7.635655 10.883186 8.401795 7.248895 11.218617 8.087904 2.618427 6.472567 7.723142 11.152197 11.111812 7.417825 8.830868 10.970547 6.502942 12.108009 9.134725 10.436632 9.289755 10.126823 10.401291 10.526234 8.365062 NA 9.861651 7.547336 10.986421 8.031721 11.251676 10.045973 6.788713 13.909811 9.690293 10.076588 12.834418 10.938959 9.806722 4.590404 TCGA-Z7-A8R5 61 0 NA 3287 breast stage iiia t3 n1a mx female 2005 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 6 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1828673 8.2705915 10.4202209 4.8415354 9.3009654 8.6849313 8.8434111 9.4660246 12.1392143 12.0534220 10.1865693 10.0346484 0.8415706 13.0168753 2.7160032 12.7769443 7.5694539 8.9254562 8.7323045 11.5448605 0.8415706 12.3375552 7.0379313 10.7350173 9.9819374 5.2338497 0.2565276 9.7036545 9.4214781 -0.7434724 7.8377717 6.1634625 NA 3.6488911 8.9483147 9.0926216 9.4877924 10.6521053 9.1376851 9.8443488 9.5233577 9.9912808 14.3456906 4.6855197 10.1098808 9.2381384 9.7869776 3.4264929 6.6488882 7.2844771 12.6504979 0.2565276 11.0284733 5.3226601 6.1145523 5.4853914 9.2409897 11.9364911 10.7996030 12.2679732 12.0068595 8.9535388 10.6212531 10.5251132 10.0255825 9.6185149 2.0639171 11.1365373 10.7791528 -0.7434724 10.3546032 8.2309859 3.5256054 3.1634665 11.3413796 9.1858296 9.8931958 8.5233577 4.5044996 10.0189532 13.1832378 13.3286200 9.3819848 9.9004274 -0.15324000 0.48551000 0.49639000 -0.15848000 -0.15848000 0.13773000 0.14667000 0.15278000 0.13699000 0.08493200 0.08493200 0.08493200 -0.00415460 -0.00415460 -0.15631000 -0.15631000 -0.15631000 0.14995000 0.13933000 -0.16294000 -0.00083160 -0.15042000 0.00889200 0.00889200 0.00889200 0.00861350 0.00861350 0.00861350 0.01126100 -0.15324000 -0.15324000 0.00569190 -0.15848000 0.18404000 0.13773000 0.14667000 0.14667000 0.15278000 -0.17322000 0.14741000 -0.00802440 -0.00802440 0.08493200 0.00000000 0.00000000 0.00000000 0.00000000 -0.00415460 -0.00415460 -0.15631000 -0.15631000 -0.15631000 -0.15631000 0.14995000 0.13933000 0.13933000 -0.16294000 -0.00083160 -0.15042000 -0.18282000 0.00889200 0.00889200 0.00499690 0.00861350 0.00861350 0.01126100 0.00083195 -0.14798000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.490 0.307 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.490 0.307 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9946634 12.4828329 5.9289956 9.4672426 3.7801316 11.1765518 4.7801316 2.5785040 9.5908445 9.1843492 1.2565880 7.6402753 5.0114599 10.1392143 9.5941930 1.5785040 8.3935625 9.2266771 9.5056847 11.3043768 9.5286645 6.5044980 11.1765518 3.4264929 9.4012294 10.2302686 4.7801316 NA 10.6958827 4.6828373 14.0838147 12.1529036 8.1634620 10.1161060 8.3036949 10.1679631 3.7801316 4.2565729 NA 0.8415706 9.4239892 11.1854596 8.6207059 5.2107668 9.0672391 8.7343296 10.5494680 4.8712818 9.9570109 0.8415706 10.8972680 2.0639171 6.1873085 9.5215416 6.7218115 5.8564853 10.4383446 8.3199665 8.6574507 0.2565276 14.6442183 0.2565276 11.1498727 NA 8.1453147 6.1269357 7.9604746 9.0428407 10.9091518 5.4853914 8.7057198 13.0168753 10.2817108 10.8518287 11.5448605 10.4082220 9.0526107 9.7693117 12.8947808 10.8415337 7.2844771 9.3226603 0.8415706 7.5830008 9.5534874 10.6190630 5.1634625 8.6870236 8.7444114 6.4660251 9.0983872 7.2677989 7.3703134 10.1865693 7.6617126 0.8415706 8.7118985 6.4258956 10.5092366 10.2830946 8.0799386 10.3967619 4.3440331 5.9289956 11.4436139 9.4877924 10.7221376 9.9103120 10.4550162 10.0436576 10.0558529 6.0767493 NA 10.0608555 7.6659619 11.0284733 5.5419732 11.3463527 9.2409897 7.3064199 15.1873778 10.4069532 10.2899942 12.6874157 10.6483518 9.1453144 2.0639171 TCGA-Z7-A8R6 46 0 NA 3256 breast stage i t1c n0 m0 female 2005 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 3 NA NA 1 1 3 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.38695856 9.27715649 11.67888306 8.07883609 8.30202425 9.32568840 10.47389201 9.33815228 9.56519121 9.00356457 11.65183509 10.41370334 4.83461515 12.31607233 0.79900439 8.91169368 6.12092212 8.08254506 8.69986044 12.97678678 1.93651545 14.19482218 6.52145911 9.76015373 11.37623351 5.44285063 1.06205262 9.57896229 11.08993392 0.06198352 6.35358266 5.49943454 NA 3.43126191 9.03548618 10.32764302 9.20243168 11.51889570 9.15478521 10.35856187 3.93649661 11.17728841 15.07979330 9.18911959 10.29204837 10.19345624 10.09774352 3.47706852 NA 8.59730322 11.35989953 -1.52284079 8.52963357 6.44284897 4.78084550 5.48829327 9.57378066 12.08543578 10.90464019 11.85468270 12.53514175 7.95279890 10.74385195 10.02160007 10.65417352 10.85183327 3.64699208 12.20456051 12.50298360 1.47705557 10.37415453 9.32333944 3.56749677 3.33504013 10.56585370 9.71248143 9.79899354 9.51255184 3.43126191 9.42397182 13.25339566 11.97029546 10.10459928 9.90333026 -0.0663860 0.6693400 0.6600000 -0.0109220 -0.0176660 -0.0567120 0.5260800 -0.0139530 -0.0139530 -0.8157300 -0.8157300 1.3711000 0.6786400 0.0000000 0.6649300 3.6569000 -0.8151500 -0.0044312 -0.0044312 -0.0695020 0.8202000 -0.0559030 0.0272160 0.0307320 0.0360880 -0.0603450 -0.0603450 -0.0603450 0.6690000 -0.0663860 -0.0663860 0.0018030 -0.0109220 -0.0567120 -0.0642400 0.5260800 0.5224600 -0.0139530 -0.0139530 -0.0139530 0.0183830 0.0131300 -0.8157300 -0.0472600 -0.0771250 0.6313400 0.6313400 -1.2875000 -0.0013858 0.6649300 1.3573000 -0.7984400 -0.8198300 -0.0044312 -0.0044312 -0.0044312 -0.0678600 0.8129800 -0.0716660 -0.8200400 -0.7680900 0.0307320 -0.0221950 -0.0603450 -0.0603450 0.6690000 -0.0532060 -0.0685290 0.000 0.000 -0.112 -0.777 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.417 0.000 0.631 0.106 0.106 0.000 0.000 -0.112 -0.777 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.417 0.000 0.631 0.106 0.106 7.58297367 13.66858738 7.59080783 9.90647215 2.38396689 10.79023192 0.06198352 NA 9.31390473 7.89280750 -1.52284079 7.16005998 2.56452450 10.57147308 9.48128582 5.13527628 5.78084550 8.94874071 8.85752635 10.66596332 9.54599828 6.65697395 10.19559835 0.79900439 7.25514285 10.14151275 3.64699208 -1.52284079 10.71098461 1.28439568 12.09934610 12.10368708 6.38995393 9.41443916 7.95077108 9.87901157 2.38396689 1.28439568 -1.52284079 9.72321228 9.06014820 10.79927531 9.38169997 2.28442529 7.88842789 8.28924290 9.80910200 5.39592994 9.95229221 -0.52284079 9.70888661 2.06201807 2.79898366 9.36388988 6.75982961 2.06201807 9.12272396 6.97691119 4.66688722 2.17750326 13.77734649 NA 10.12137240 NA 6.81691581 3.38395307 6.80798210 7.99473471 15.945641 5.686520 8.228609 12.316072 9.927761 10.502551 12.976787 11.984612 8.347430 9.988324 12.786115 11.428532 8.597303 9.338928 5.499435 7.277965 10.394438 11.62204225 7.44573250 8.61533721 9.18787189 9.22021676 11.44060458 5.84338846 7.98485989 11.65183509 7.30361364 0.06198352 6.52691389 8.37103431 9.29564773 10.01136830 9.96691333 10.20838447 9.52145950 4.40780140 12.68355253 9.20243168 11.14926978 11.47194920 10.34318527 9.46148395 10.61181262 7.93239253 NA 8.48329341 3.86938780 8.52963357 6.12811809 10.87072404 9.57378066 7.45434536 13.75845218 10.76621980 9.39294482 12.49856600 11.51821118 9.56452831 0.06198352 all_p NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.65750187780228e-06 2.68375504126967e-06 2.67857279638075e-06 2.77107709881703e-06 3.23393964921773e-06 3.24787245456247e-06 3.38420882157618e-06 3.67087235050797e-06 3.78622395972494e-06 4.82344426357817e-06 4.89081866342209e-06 4.89986925453191e-06 4.93898611432218e-06 4.96178793653862e-06 5.01004229626501e-06 5.02979052209894e-06 5.12973082479164e-06 2.63147789106091e-05 2.64177186277094e-05 2.64461604196344e-05 2.64476797122752e-05 2.64549014640213e-05 2.65882308148352e-05 2.66031147424731e-05 2.66505260717884e-05 2.66704091842713e-05 4.51616142571032e-05 4.53761233003148e-05 4.5421430043032e-05 4.54573460153028e-05 4.57526844379542e-05 4.60121304116907e-05 4.60411026681413e-05 4.60950081288437e-05 2.86085114785188e-05 2.86270288533307e-05 2.86384918449759e-05 2.86862135331168e-05 2.87650461424622e-05 2.88199848084222e-05 2.8956838363475e-05 2.9026722642869e-05 3.21694460037749e-06 3.27304215410181e-06 3.29553821821266e-06 3.30402106815036e-06 3.3124356525809e-06 3.31617621807435e-06 3.46515222974837e-06 3.47224884159909e-06 3.52296310283107e-06 3.57754509562444e-06 3.67729152865899e-06 3.7633638261722e-06 3.82043356576894e-06 3.8819109432464e-06 3.93404558278684e-06 3.9657847727373e-06 3.993456775238e-06 4.03249437765492e-06 1.64588982407308e-05 1.65076842413048e-05 1.65412130496624e-05 1.65695335338836e-05 1.66023286365513e-05 1.6655118817729e-05 1.67689482696479e-05 1.67939476657445e-05 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA all_q NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.00122 0.002658798 0.000938 0.0498 0.0318 2.72e-12 2.65e-11 2.1e-05 0.0299 6.68e-07 0.0584 0.0109 0.0122 2.58042e-05 2.36e-12 2.36e-12 0.0871 0.000129 0.0544 3.42e-05 0.0833 0.00233 1.32e-11 7.12e-11 0.024 0.000111 2.36e-12 0.00166 0.0584 2.36e-12 0.0252 0.01261636 0.0933 0.00143 1.88e-12 2.36e-12 0.04719746 0.06649616 0.05386746 0.021 2.65e-11 0.0318 2.36e-12 2.36e-12 0.005203389 0.0323 0.0101 0.00869 0.0365 0.05945206 0.002658798 0.05589327 0.006953122 0.004252241 2.076925e-11 1.48593e-11 6.245252e-06 0.05810972 7.824577e-07 0.0006835175 0 0.01115471 0.0686217 2.58042e-05 1.758489e-09 1.418388e-11 0.02706487 2.45677e-07 0.01876771 0.0004216583 0.03591866 0.08354012 0.08354012 5.675694e-07 2.679177e-11 2.076925e-11 0.008241176 0.002103522 1.18925e-09 0.05945206 0.01351501 1.418388e-11 0.01931107 0 0.01261636 1.18925e-09 1.48593e-11 0.08354012 0.04719746 0.06649616 0.05386746 0.0001540493 3.667545e-11 0.002075347 0 0.005203389 0.0005822604 0.08354012 0.05311451 0.002658798 0.009255946 5.29455e-08 0.08754485 0.04421066 2.028155e-12 0.008173351 8.112622e-13 2.00544e-09 4.002835e-06 0.002898264 0.0443534 0.06352646 0.02072257 1.41354e-07 0.06569993 4.567e-13 0.0004673545 3.338429e-07 0.0002980018 0.0454224 0.03889325 0.03207077 0.0454224 0.008487218 0.01061282 6.454328e-09 4.567e-13 0.08951232 4.822503e-11 0.02676936 0.01727468 0.06053351 0.01651513 0.0209785 0.0003513061 0.00196304 0.03536438 0.09898851 4.567e-13 0.01194513 2.433787e-11 0.01261636 0.00711718 2.039145e-06 6.586195e-06 0.08805339 3.676032e-11 0.002870831 0.04719746 0.06649616 0.01962505 0.00116854 0.05386746 0.01852866 1.454685e-06 0.00196304 0.02683934 0.02683934 4.567e-13 0.08620584 0.04354078 0.005203389 0.0209785 0.0454224 0.0778249 0.000334636 0.01852866 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4.1251e-13 2.7818e-43 6.389e-22 0.030045 2.4663e-12 0.0030828 0.20029 1.6539e-05 8.7327e-14 1.7328e-96 9.7333e-35 8.6006e-92 1.7637e-05 9.2757e-05 0.0013406 4.0078e-213 6.5861e-65 0.00022087 3.0402e-15 0.01232 0.001442 1.5812e-12 0.14805 8.5344e-137 7.6344e-83 0.070079 3.0797e-07 0.0024439 2.1378e-48 1.0212e-46 6.5822e-11 7.2629e-12 1.602e-31 0.015714 5.8191e-15 2.0947e-12 4.6397e-06 2.9737e-07 2.0136e-13 6.2689e-23 0.048768 1.7327e-10 3.7646e-48 4.537e-07 8.6346e-27 0.0017542 0.098723 1.799e-36 2.7302e-13 2.1562e-19 9.2541e-05 2.7755e-59 1.7415e-52 0.0005596 1.0737e-06 1.1718e-07 5.9941e-51 5.0689e-10 3.4352e-15 2.4525e-08 3.9091e-17 2.8504e-10 6.3701e-06 1.4838e-35 0.016935 0.00082586 5.9777e-09 0.045243 1 1 1 1 1 1 1 1 1 0 1 1 0.076 1 1 1 0.895 0.357 0 0 0 1 1 1 1 1 1 1 1 0.00275 0.357 1 1 0.000424 0.0109 0.00266 0 1 1 1 1 1 0.177 6.85e-05 0 1 1 0 3.19e-06 1.6e-12 0 0 0 0 1.11e-10 9.39e-10 1 1 4.65e-14 1.01e-12 1 1 1 0 1 1 1 1 1.43e-12 2.41e-08 1 0.000576 1 8.54e-06 1 1 0 0.916 3.64e-09 1.45e-06 1 1 0.000100511121977006 0.000101074867452807 0.000101074867452807 0.000103842222042122 0.000118782269919927 0.000119048559476494 0.000123284858788462 0.000131575291855028 0.00013489558723708 0.000100496884340797 0.000101662828086582 0.00010173225046647 0.000102425027520996 0.000102658873753193 0.000103536999380122 0.000103824667857092 0.00010515653039452 0.000100122057136606 0.000100492257021998 0.000100563279913441 0.000100563279913441 0.000100569273299205 0.000101054564483779 0.000101089566131061 0.00010122653975327 0.000101280466682713 0.000100050863869672 0.000100501089204502 0.000100588930232045 0.000100655955489945 0.000101284742211721 0.000101846432797448 0.000101897900724347 0.000101991861235526 0.000100360776581003 0.000100405964164842 0.000100426396402835 0.000100573943688042 0.000100810649612792 0.000100983322064759 0.000101422948998613 0.000101607788791525 0.000100186452991477 0.000101672458191744 0.000102098639685635 0.000102183734909775 0.000102204780534215 0.000102204780534215 0.000106427968656444 0.000106462376702661 0.000107831726312427 0.00010229596843251 0.00010481163406645 0.000107093551436792 0.000108544184275292 0.000110115225386929 0.000111416674104554 0.000112137285621496 0.000112740790798874 0.000113304187450386 0.000100033713156049 0.000100296005141406 0.00010046545150586 0.000100603159636197 0.000100767932651286 0.00010105391233618 0.000101675304450479 0.000101792236719147 4.0078e-213 3.0797e-07 0.0030828 8.5344e-137 0.01232 6.389e-22 0.001442 1.5812e-12 6.5861e-65 0.00022087 2.7818e-43 8.6006e-92 2.4663e-12 6.389e-22 0.20029 7.6344e-83 2.1378e-48 0.098723 1.0737e-06 6.5822e-11 1.1718e-07 2.8504e-10 0.098723 0.048768 2.4525e-08 0.0005596 8.6346e-27 3.7646e-48 2.8504e-10 2.4525e-08 5.8191e-15 0.098723 5.0689e-10 2.1562e-19 2.0947e-12 2.9737e-07 9.2541e-05 3.9091e-17 5.0689e-10 9.2541e-05 6.2689e-23 0.098723 0.098723 2.7755e-59 1.0212e-46 2.7755e-59 2.7755e-59 1.799e-36 4.537e-07 0.098723 5.9941e-51 6.5822e-11 6.5822e-11 1.0212e-46 2.7755e-59 2.8504e-10 1.4838e-35 0.098723 5.0689e-10