name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A1-A0SB-01A-11D-A142-09	17	17	0	14	0	1	exome+100bp flanks	34834024	3	12	8.612269e-08	3.444908e-07
TCGA-A1-A0SD-01A-11D-A10Y-09	27	27	0	24	0	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-A1-A0SE-01A-11D-A099-09	26	25	1	17	3.846154e-02	1	exome+100bp flanks	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-A1-A0SF-01A-11D-A142-09	38	36	2	30	5.263158e-02	1	exome+100bp flanks	34834024	5	27	1.435378e-07	7.751042e-07
TCGA-A1-A0SG-01A-11D-A142-09	32	31	1	26	3.125000e-02	1	exome+100bp flanks	34834024	5	25	1.435378e-07	7.176891e-07
TCGA-A1-A0SH-01A-11D-A099-09	94	88	6	70	6.382979e-02	1	exome+100bp flanks	34834024	18	63	5.167362e-07	1.808577e-06
TCGA-A1-A0SI-01A-11D-A142-09	193	185	8	136	4.145078e-02	1	exome+100bp flanks	34834024	47	126	1.349256e-06	3.617153e-06
TCGA-A1-A0SJ-01A-11D-A099-09	31	28	3	24	9.677419e-02	1	exome+100bp flanks	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-A1-A0SK-01A-12D-A099-09	161	130	31	82	1.925466e-01	1	exome+100bp flanks	34834024	30	64	8.612269e-07	1.837284e-06
TCGA-A1-A0SM-01A-11D-A099-09	32	26	6	21	1.875000e-01	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-A1-A0SN-01A-11D-A142-09	50	49	1	38	2.000000e-02	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-A1-A0SP-01A-11D-A099-09	44	42	2	32	4.545455e-02	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-A1-A0SQ-01A-21D-A142-09	26	26	0	19	0	1	exome+100bp flanks	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-A2-A04N-01A-11D-A10Y-09	41	41	0	32	0	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-A2-A04P-01A-31D-A128-09	112	108	4	88	3.571429e-02	1	exome+100bp flanks	34834024	16	79	4.593210e-07	2.267898e-06
TCGA-A2-A04Q-01A-21W-A050-09	12	11	1	6	8.333333e-02	1	exome+100bp flanks	34834024	5	6	1.435378e-07	1.722454e-07
TCGA-A2-A04R-01A-41D-A117-09	79	75	4	60	5.063291e-02	1	exome+100bp flanks	34834024	13	57	3.731983e-07	1.636331e-06
TCGA-A2-A04T-01A-21W-A050-09	93	82	11	66	1.182796e-01	1	exome+100bp flanks	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-A2-A04U-01A-11D-A10Y-09	55	54	1	45	1.818182e-02	1	exome+100bp flanks	34834024	9	43	2.583681e-07	1.234425e-06
TCGA-A2-A04V-01A-21W-A050-09	34	32	2	25	5.882353e-02	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-A2-A04W-01A-31D-A10Y-09	107	104	3	80	2.803738e-02	0	coding only	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-A2-A04X-01A-21W-A050-09	30	27	3	18	1.000000e-01	1	exome+100bp flanks	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-A2-A04Y-01A-21W-A050-09	47	46	1	43	2.127660e-02	1	exome+100bp flanks	34834024	3	39	8.612269e-08	1.119595e-06
TCGA-A2-A0CK-01A-11D-A228-09	26	22	4	12	1.538462e-01	1	exome+100bp flanks	34834024	10	12	2.870756e-07	3.444908e-07
TCGA-A2-A0CL-01A-11D-A10Y-09	23	19	4	15	1.739130e-01	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-A2-A0CM-01A-31W-A050-09	54	53	1	43	1.851852e-02	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-A2-A0CO-01A-13D-A228-09	37	28	9	18	2.432432e-01	1	exome+100bp flanks	34834024	9	16	2.583681e-07	4.593210e-07
TCGA-A2-A0CP-01A-11W-A050-09	82	77	5	73	6.097561e-02	1	exome+100bp flanks	34834024	3	65	8.612269e-08	1.865992e-06
TCGA-A2-A0CQ-01A-21W-A050-09	37	36	1	25	2.702703e-02	1	exome+100bp flanks	34834024	9	22	2.583681e-07	6.315664e-07
TCGA-A2-A0CR-01A-11D-A228-09	120	108	12	90	1.000000e-01	1	exome+100bp flanks	34834024	18	84	5.167362e-07	2.411435e-06
TCGA-A2-A0CS-01A-11D-A10Y-09	34	33	1	26	2.941176e-02	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-A2-A0CT-01A-31W-A071-09	77	76	1	56	1.298701e-02	1	exome+100bp flanks	34834024	19	52	5.454437e-07	1.492793e-06
TCGA-A2-A0CU-01A-12W-A050-09	40	38	2	32	5.000000e-02	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-A2-A0CV-01A-31D-A10Y-09	22	22	0	19	0	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-A2-A0CW-01A-21D-A10Y-09	60	57	3	49	5.000000e-02	1	exome+100bp flanks	34834024	8	40	2.296605e-07	1.148303e-06
TCGA-A2-A0CX-01A-21W-A019-09	203	194	9	149	4.433498e-02	1	exome+100bp flanks	34834024	43	139	1.234425e-06	3.990352e-06
TCGA-A2-A0CZ-01A-11W-A050-09	16	15	1	13	6.250000e-02	1	exome+100bp flanks	34834024	2	12	5.741513e-08	3.444908e-07
TCGA-A2-A0D0-01A-11W-A019-09	66	62	4	46	6.060606e-02	1	exome+100bp flanks	34834024	16	43	4.593210e-07	1.234425e-06
TCGA-A2-A0D1-01A-11W-A050-09	75	71	4	53	5.333333e-02	1	exome+100bp flanks	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-A2-A0D2-01A-21W-A050-09	80	78	2	61	2.500000e-02	1	exome+100bp flanks	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-A2-A0D3-01A-11D-A10Y-09	27	26	1	19	3.703704e-02	1	exome+100bp flanks	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-A2-A0D4-01A-11W-A019-09	29	29	0	24	0	1	exome+100bp flanks	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-A2-A0EM-01A-11W-A050-09	25	25	0	25	0	1	exome+100bp flanks	34834024	0	22	0	6.315664e-07
TCGA-A2-A0EN-01A-13D-A099-09	36	32	4	27	1.111111e-01	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-A2-A0EO-01A-11W-A050-09	30	29	1	22	3.333333e-02	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-A2-A0EP-01A-52D-A22X-09	9	3	6	3	6.666667e-01	1	exome+100bp flanks	34834024	0	3	0	8.612269e-08
TCGA-A2-A0EQ-01A-11W-A050-09	82	78	4	62	4.878049e-02	1	exome+100bp flanks	34834024	16	58	4.593210e-07	1.665039e-06
TCGA-A2-A0ER-01A-21W-A050-09	28	26	2	21	7.142857e-02	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-A2-A0ES-01A-11D-A10Y-09	5	4	1	3	2.000000e-01	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-A2-A0ET-01A-31D-A045-09	32	28	4	21	1.250000e-01	1	exome+100bp flanks	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-A2-A0EU-01A-22W-A071-09	40	40	0	33	0	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-A2-A0EV-01A-11W-A050-09	59	58	1	49	1.694915e-02	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-A2-A0EW-01A-21D-A10Y-09	14	13	1	10	7.142857e-02	1	exome+100bp flanks	34834024	3	10	8.612269e-08	2.870756e-07
TCGA-A2-A0EX-01A-21W-A050-09	28	25	3	22	1.071429e-01	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-A2-A0EY-01A-11W-A050-09	210	200	10	138	4.761905e-02	1	exome+100bp flanks	34834024	61	131	1.751161e-06	3.760691e-06
TCGA-A2-A0ST-01A-12D-A099-09	8	7	1	4	1.250000e-01	1	exome+100bp flanks	34834024	3	4	8.612269e-08	1.148303e-07
TCGA-A2-A0SU-01A-11D-A099-09	23	23	0	17	0	1	exome+100bp flanks	34834024	6	16	1.722454e-07	4.593210e-07
TCGA-A2-A0SV-01A-11D-A099-09	35	35	0	24	0	1	exome+100bp flanks	34834024	11	23	3.157832e-07	6.602740e-07
TCGA-A2-A0SW-01A-11D-A099-09	54	51	3	41	5.555556e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-A2-A0SX-01A-12D-A099-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-A2-A0SY-01A-31D-A099-09	131	128	3	98	2.290076e-02	0	coding only	34834024	23	87	6.602740e-07	2.497558e-06
TCGA-A2-A0T0-01A-22D-A099-09	171	163	8	131	4.678363e-02	1	exome+100bp flanks	34834024	28	121	8.038118e-07	3.473615e-06
TCGA-A2-A0T1-01A-21D-A099-09	16	16	0	11	0	1	exome+100bp flanks	34834024	5	11	1.435378e-07	3.157832e-07
TCGA-A2-A0T2-01A-11W-A097-09	34	30	4	22	1.176471e-01	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-A2-A0T3-01A-21D-A10Y-09	36	31	5	21	1.388889e-01	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-A2-A0T4-01A-31D-A099-09	31	30	1	23	3.225806e-02	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-A2-A0T5-01A-21D-A099-09	1556	1399	157	1067	1.008997e-01	1	exome+100bp flanks	34834024	306	990	8.784515e-06	2.842049e-05
TCGA-A2-A0T6-01A-11D-A099-09	119	110	9	89	7.563025e-02	1	exome+100bp flanks	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-A2-A0T7-01A-21D-A099-09	23	22	1	17	4.347826e-02	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-A2-A0YC-01A-11D-A117-09	18	18	0	16	0	1	exome+100bp flanks	34834024	2	15	5.741513e-08	4.306135e-07
TCGA-A2-A0YD-01A-11D-A10G-09	64	61	3	43	4.687500e-02	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-A2-A0YE-01A-11D-A10G-09	51	40	11	29	2.156863e-01	1	exome+100bp flanks	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-A2-A0YF-01A-21D-A10G-09	28	25	3	15	1.071429e-01	1	exome+100bp flanks	34834024	9	14	2.583681e-07	4.019059e-07
TCGA-A2-A0YG-01A-21D-A10G-09	51	50	1	37	1.960784e-02	1	exome+100bp flanks	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-A2-A0YH-01A-11D-A10G-09	60	59	1	47	1.666667e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-A2-A0YI-01A-31D-A10M-09	13	13	0	9	0	1	exome+100bp flanks	34834024	4	9	1.148303e-07	2.583681e-07
TCGA-A2-A0YJ-01A-11D-A10G-09	54	53	1	46	1.851852e-02	1	exome+100bp flanks	34834024	6	44	1.722454e-07	1.263133e-06
TCGA-A2-A0YK-01A-22D-A117-09	195	187	8	134	4.102564e-02	1	exome+100bp flanks	34834024	52	127	1.492793e-06	3.645861e-06
TCGA-A2-A0YL-01A-21D-A10G-09	13	13	0	8	0	1	exome+100bp flanks	34834024	5	8	1.435378e-07	2.296605e-07
TCGA-A2-A0YM-01A-11D-A10G-09	71	67	4	50	5.633803e-02	1	exome+100bp flanks	34834024	17	48	4.880286e-07	1.377963e-06
TCGA-A2-A0YT-01A-11D-A10G-09	53	50	3	41	5.660377e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-A2-A1FV-01A-11D-A13L-09	40	37	3	31	7.500000e-02	1	exome+100bp flanks	34834024	5	31	1.435378e-07	8.899345e-07
TCGA-A2-A1FW-01A-11D-A13L-09	66	63	3	40	4.545455e-02	1	exome+100bp flanks	34834024	21	40	6.028589e-07	1.148303e-06
TCGA-A2-A1FX-01A-11D-A13L-09	20	19	1	16	5.000000e-02	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-A2-A1FZ-01A-51D-A17G-09	31	29	2	23	6.451613e-02	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-A2-A1G0-01A-11D-A13L-09	21	20	1	18	4.761905e-02	1	exome+100bp flanks	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-A2-A1G1-01A-21D-A13L-09	30	29	1	20	3.333333e-02	1	exome+100bp flanks	34834024	9	19	2.583681e-07	5.454437e-07
TCGA-A2-A1G4-01A-11D-A13L-09	34	34	0	25	0	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-A2-A1G6-01A-11D-A13L-09	5	4	1	4	2.000000e-01	1	exome+100bp flanks	34834024	0	3	0	8.612269e-08
TCGA-A2-A259-01A-11D-A16D-09	14	13	1	11	7.142857e-02	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-A2-A25A-01A-12D-A16D-09	103	96	7	78	6.796117e-02	1	exome+100bp flanks	34834024	16	76	4.593210e-07	2.181775e-06
TCGA-A2-A25B-01A-11D-A167-09	87	81	6	59	6.896552e-02	1	exome+100bp flanks	34834024	22	53	6.315664e-07	1.521501e-06
TCGA-A2-A25C-01A-11D-A167-09	24	22	2	18	8.333333e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-A2-A25D-01A-12D-A16D-09	55	55	0	40	0	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-A2-A25E-01A-11D-A167-09	55	54	1	46	1.818182e-02	1	exome+100bp flanks	34834024	8	43	2.296605e-07	1.234425e-06
TCGA-A2-A25F-01A-11D-A167-09	3	3	0	0	0	1	exome+100bp flanks	34834024	3	0	8.612269e-08	0
TCGA-A2-A3KC-01A-11D-A20S-09	41	28	13	24	3.170732e-01	1	exome+100bp flanks	34834024	4	17	1.148303e-07	4.880286e-07
TCGA-A2-A3KD-01A-12D-A20S-09	18	10	8	6	4.444444e-01	1	exome+100bp flanks	34834024	3	6	8.612269e-08	1.722454e-07
TCGA-A2-A3XS-01A-11D-A22X-09	34	24	10	19	2.941176e-01	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-A2-A3XT-01A-11D-A22X-09	103	79	24	64	2.330097e-01	1	exome+100bp flanks	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-A2-A3XU-01A-12D-A22X-09	31	22	9	17	2.903226e-01	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-A2-A3XV-01A-21D-A23C-09	56	44	12	38	2.142857e-01	1	exome+100bp flanks	34834024	6	37	1.722454e-07	1.062180e-06
TCGA-A2-A3XW-01A-11D-A23C-09	12	6	6	3	5.000000e-01	1	exome+100bp flanks	34834024	3	2	8.612269e-08	5.741513e-08
TCGA-A2-A3XX-01A-21D-A23C-09	40	35	5	30	1.250000e-01	1	exome+100bp flanks	34834024	3	24	8.612269e-08	6.889816e-07
TCGA-A2-A3XY-01A-11D-A23C-09	60	47	13	36	2.166667e-01	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-A2-A3XZ-01A-42D-A23C-09	52	42	10	33	1.923077e-01	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-A2-A3Y0-01A-11D-A23C-09	197	169	28	132	1.421320e-01	1	exome+100bp flanks	34834024	36	121	1.033472e-06	3.473615e-06
TCGA-A2-A4RW-01A-21D-A25Q-09	124	107	17	86	1.370968e-01	1	exome+100bp flanks	34834024	19	81	5.454437e-07	2.325313e-06
TCGA-A2-A4RX-01A-11D-A25Q-09	22	17	5	11	2.272727e-01	1	exome+100bp flanks	34834024	6	10	1.722454e-07	2.870756e-07
TCGA-A2-A4RY-01A-31D-A25Q-09	32	12	20	9	6.250000e-01	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-A2-A4S0-01A-21D-A25Q-09	17	10	7	6	4.117647e-01	1	exome+100bp flanks	34834024	4	6	1.148303e-07	1.722454e-07
TCGA-A2-A4S1-01A-21D-A25Q-09	80	65	15	59	1.875000e-01	1	exome+100bp flanks	34834024	6	51	1.722454e-07	1.464086e-06
TCGA-A2-A4S2-01A-12D-A25Q-09	45	39	6	30	1.333333e-01	1	exome+100bp flanks	34834024	8	29	2.296605e-07	8.325194e-07
TCGA-A2-A4S3-01A-21D-A25Q-09	89	72	17	50	1.910112e-01	1	exome+100bp flanks	34834024	19	45	5.454437e-07	1.291840e-06
TCGA-A7-A0CD-01A-11W-A019-09	33	31	2	23	6.060606e-02	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-A7-A0CE-01A-11W-A019-09	114	106	8	86	7.017544e-02	1	exome+100bp flanks	34834024	20	86	5.741513e-07	2.468851e-06
TCGA-A7-A0CG-01A-11W-A019-09	33	30	3	26	9.090909e-02	1	exome+100bp flanks	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-A7-A0CH-01A-21W-A019-09	30	28	2	25	6.666667e-02	1	exome+100bp flanks	34834024	3	23	8.612269e-08	6.602740e-07
TCGA-A7-A0CJ-01A-21W-A019-09	50	44	6	35	1.200000e-01	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-A7-A0D9-01A-31W-A071-09	24	24	0	20	0	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-A7-A0DA-01A-31D-A10Y-09	131	120	11	103	8.396947e-02	1	exome+100bp flanks	34834024	17	94	4.880286e-07	2.698511e-06
TCGA-A7-A0DB-01A-11D-A272-09	42	37	5	26	1.190476e-01	1	exome+100bp flanks	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-A7-A0DB-01A-11W-A019-09	50	49	1	39	2.000000e-02	1	exome+100bp flanks	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-A7-A0DC-01B-04D-A22N-09	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-A7-A13D-01A-13D-A12Q-09	103	94	9	75	8.737864e-02	1	exome+100bp flanks	34834024	16	70	4.593210e-07	2.009530e-06
TCGA-A7-A13D-01A-13D-A272-09	114	92	22	72	1.929825e-01	1	exome+100bp flanks	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-A7-A13E-01A-11D-A12Q-09	137	129	8	94	5.839416e-02	1	exome+100bp flanks	34834024	31	87	8.899345e-07	2.497558e-06
TCGA-A7-A13E-01A-11D-A272-09	72	61	11	45	1.527778e-01	1	exome+100bp flanks	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-A7-A13F-01A-11D-A12Q-09	34	33	1	29	2.941176e-02	1	exome+100bp flanks	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-A7-A13G-01A-11D-A13L-09	26	25	1	16	3.846154e-02	1	exome+100bp flanks	34834024	8	15	2.296605e-07	4.306135e-07
TCGA-A7-A13H-01A-11D-A228-09	26	22	4	19	1.538462e-01	1	exome+100bp flanks	34834024	2	18	5.741513e-08	5.167362e-07
TCGA-A7-A26E-01A-11D-A167-09	40	38	2	28	5.000000e-02	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-A7-A26E-01A-11D-A272-09	50	42	8	33	1.600000e-01	1	exome+100bp flanks	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-A7-A26E-01B-06D-A272-09	284	252	32	206	1.126761e-01	1	exome+100bp flanks	34834024	42	196	1.205718e-06	5.626683e-06
TCGA-A7-A26F-01A-21D-A167-09	34	32	2	24	5.882353e-02	1	exome+100bp flanks	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-A7-A26F-01B-04D-A22N-09	66	60	6	53	9.090909e-02	1	exome+100bp flanks	34834024	7	48	2.009530e-07	1.377963e-06
TCGA-A7-A26G-01A-21D-A167-09	53	47	6	32	1.132075e-01	1	exome+100bp flanks	34834024	15	31	4.306135e-07	8.899345e-07
TCGA-A7-A26H-01A-11D-A167-09	100	97	3	72	3.000000e-02	1	exome+100bp flanks	34834024	23	69	6.602740e-07	1.980822e-06
TCGA-A7-A26I-01A-11D-A167-09	34	30	4	26	1.176471e-01	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-A7-A26I-01B-06D-A22N-09	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-A7-A26J-01A-11D-A167-09	21	21	0	16	0	1	exome+100bp flanks	34834024	5	15	1.435378e-07	4.306135e-07
TCGA-A7-A26J-01A-11D-A272-09	29	24	5	18	1.724138e-01	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-A7-A26J-01B-02D-A272-09	163	140	23	119	1.411043e-01	1	exome+100bp flanks	34834024	20	112	5.741513e-07	3.215247e-06
TCGA-A7-A2KD-01A-31D-A21Q-09	49	36	13	28	2.653061e-01	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-A7-A3IY-01A-21D-A21Q-09	25	15	10	10	4.000000e-01	1	exome+100bp flanks	34834024	5	9	1.435378e-07	2.583681e-07
TCGA-A7-A3IZ-01A-11D-A20S-09	126	87	39	58	3.095238e-01	2	all capture (no interval list)	65505363	23	50	3.511163e-07	7.632963e-07
TCGA-A7-A3J0-01A-11D-A20S-09	87	40	47	25	5.402299e-01	1	exome+100bp flanks	34834024	13	12	3.731983e-07	3.444908e-07
TCGA-A7-A3J1-01A-11D-A20S-09	33	23	10	17	3.030303e-01	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-A7-A3RF-01A-11D-A228-09	71	60	11	44	1.549296e-01	1	exome+100bp flanks	34834024	15	39	4.306135e-07	1.119595e-06
TCGA-A7-A425-01A-11D-A243-09	46	37	9	32	1.956522e-01	1	exome+100bp flanks	34834024	3	27	8.612269e-08	7.751042e-07
TCGA-A7-A426-01A-22D-A243-09	46	35	11	27	2.391304e-01	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-A7-A4SA-01A-11D-A25Q-09	93	68	25	47	2.688172e-01	1	exome+100bp flanks	34834024	20	42	5.741513e-07	1.205718e-06
TCGA-A7-A4SB-01A-21D-A25Q-09	42	34	8	30	1.904762e-01	1	exome+100bp flanks	34834024	4	26	1.148303e-07	7.463967e-07
TCGA-A7-A4SC-01A-12D-A25Q-09	46	39	7	31	1.521739e-01	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-A7-A4SD-01A-11D-A25Q-09	60	48	12	38	2.000000e-01	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-A7-A4SE-01A-11D-A25Q-09	113	93	20	77	1.769912e-01	1	exome+100bp flanks	34834024	14	67	4.019059e-07	1.923407e-06
TCGA-A7-A4SF-01A-11D-A25Q-09	87	71	16	50	1.839080e-01	1	exome+100bp flanks	34834024	20	49	5.741513e-07	1.406671e-06
TCGA-A7-A56D-01A-11D-A27P-09	150	131	19	90	1.266667e-01	1	exome+100bp flanks	34834024	34	81	9.760572e-07	2.325313e-06
TCGA-A7-A5ZV-01A-11D-A28B-09	215	178	37	138	1.720930e-01	1	exome+100bp flanks	34834024	40	128	1.148303e-06	3.674568e-06
TCGA-A7-A5ZW-01A-12D-A29N-09	30	26	4	19	1.333333e-01	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-A7-A5ZX-01A-12D-A29N-09	31	26	5	24	1.612903e-01	1	exome+100bp flanks	34834024	2	23	5.741513e-08	6.602740e-07
TCGA-A8-A06N-01A-11W-A019-09	32	32	0	24	0	1	exome+100bp flanks	34834024	7	23	2.009530e-07	6.602740e-07
TCGA-A8-A06O-01A-11W-A019-09	63	60	3	53	4.761905e-02	1	exome+100bp flanks	34834024	7	50	2.009530e-07	1.435378e-06
TCGA-A8-A06P-01A-11W-A019-09	42	40	2	36	4.761905e-02	1	exome+100bp flanks	34834024	4	32	1.148303e-07	9.186421e-07
TCGA-A8-A06Q-01A-11W-A050-09	214	209	5	168	2.336449e-02	0	coding only	34834024	39	148	1.119595e-06	4.248720e-06
TCGA-A8-A06R-01A-11D-A015-09	56	54	2	42	3.571429e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-A8-A06T-01A-11W-A019-09	27	26	1	23	3.703704e-02	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-A8-A06U-01A-11W-A019-09	56	53	3	42	5.357143e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A8-A06X-01A-21W-A019-09	191	186	5	141	2.617801e-02	0	coding only	34834024	43	133	1.234425e-06	3.818106e-06
TCGA-A8-A06Y-01A-21W-A019-09	33	30	3	24	9.090909e-02	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-A8-A06Z-01A-11W-A019-09	60	56	4	43	6.666667e-02	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-A8-A075-01A-11D-A099-09	74	70	4	54	5.405405e-02	1	exome+100bp flanks	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-A8-A076-01A-21W-A019-09	55	51	4	44	7.272727e-02	1	exome+100bp flanks	34834024	6	39	1.722454e-07	1.119595e-06
TCGA-A8-A079-01A-21W-A019-09	50	48	2	36	4.000000e-02	1	exome+100bp flanks	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-A8-A07B-01A-11W-A019-09	66	62	4	47	6.060606e-02	1	exome+100bp flanks	34834024	14	43	4.019059e-07	1.234425e-06
TCGA-A8-A07C-01A-11D-A045-09	137	134	3	109	2.189781e-02	0	coding only	34834024	24	101	6.889816e-07	2.899464e-06
TCGA-A8-A07E-01A-11W-A050-09	74	73	1	65	1.351351e-02	1	exome+100bp flanks	34834024	5	62	1.435378e-07	1.779869e-06
TCGA-A8-A07F-01A-11W-A019-09	30	29	1	23	3.333333e-02	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-A8-A07G-01A-11W-A050-09	48	47	1	38	2.083333e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-A8-A07I-01A-11W-A019-09	40	38	2	29	5.000000e-02	1	exome+100bp flanks	34834024	8	29	2.296605e-07	8.325194e-07
TCGA-A8-A07J-01A-11W-A019-09	42	39	3	28	7.142857e-02	1	exome+100bp flanks	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-A8-A07L-01A-11W-A019-09	94	90	4	72	4.255319e-02	1	exome+100bp flanks	34834024	17	68	4.880286e-07	1.952114e-06
TCGA-A8-A07O-01A-11W-A019-09	41	41	0	32	0	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-A8-A07P-01A-11W-A019-09	52	50	2	38	3.846154e-02	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-A8-A07R-01A-21W-A050-09	458	411	47	343	1.026201e-01	1	exome+100bp flanks	34834024	62	320	1.779869e-06	9.186421e-06
TCGA-A8-A07U-01A-11W-A050-09	38	37	1	28	2.631579e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-A8-A07W-01A-11W-A019-09	80	78	2	59	2.500000e-02	1	exome+100bp flanks	34834024	19	54	5.454437e-07	1.550208e-06
TCGA-A8-A07Z-01A-11W-A019-09	23	22	1	17	4.347826e-02	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-A8-A081-01A-11W-A019-09	82	79	3	65	3.658537e-02	1	exome+100bp flanks	34834024	14	59	4.019059e-07	1.693746e-06
TCGA-A8-A082-01A-11W-A019-09	21	21	0	16	0	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-A8-A083-01A-21W-A019-09	29	27	2	27	6.896552e-02	1	exome+100bp flanks	34834024	0	27	0	7.751042e-07
TCGA-A8-A084-01A-21W-A019-09	65	63	2	55	3.076923e-02	1	exome+100bp flanks	34834024	8	52	2.296605e-07	1.492793e-06
TCGA-A8-A085-01A-11W-A019-09	68	66	2	51	2.941176e-02	1	exome+100bp flanks	34834024	15	50	4.306135e-07	1.435378e-06
TCGA-A8-A086-01A-11W-A019-09	23	21	2	15	8.695652e-02	1	exome+100bp flanks	34834024	6	15	1.722454e-07	4.306135e-07
TCGA-A8-A08A-01A-11W-A019-09	31	31	0	25	0	1	exome+100bp flanks	34834024	6	23	1.722454e-07	6.602740e-07
TCGA-A8-A08B-01A-11W-A019-09	33	31	2	18	6.060606e-02	1	exome+100bp flanks	34834024	12	18	3.444908e-07	5.167362e-07
TCGA-A8-A08C-01A-11W-A019-09	2	1	1	1	5.000000e-01	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-A8-A08F-01A-11W-A019-09	116	109	7	86	6.034483e-02	1	exome+100bp flanks	34834024	21	83	6.028589e-07	2.382728e-06
TCGA-A8-A08G-01A-11W-A019-09	34	33	1	26	2.941176e-02	1	exome+100bp flanks	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-A8-A08H-01A-21W-A019-09	54	49	5	42	9.259259e-02	1	exome+100bp flanks	34834024	7	41	2.009530e-07	1.177010e-06
TCGA-A8-A08I-01A-11W-A019-09	40	37	3	29	7.500000e-02	1	exome+100bp flanks	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-A8-A08J-01A-11W-A019-09	28	28	0	25	0	1	exome+100bp flanks	34834024	2	23	5.741513e-08	6.602740e-07
TCGA-A8-A08L-01A-11W-A019-09	203	200	3	157	1.477833e-02	0	coding only	34834024	42	147	1.205718e-06	4.220012e-06
TCGA-A8-A08O-01A-21W-A071-09	25	24	1	19	4.000000e-02	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-A8-A08P-01A-11W-A019-09	38	38	0	32	0	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-A8-A08R-01A-11W-A050-09	171	165	6	124	3.508772e-02	1	exome+100bp flanks	34834024	39	113	1.119595e-06	3.243955e-06
TCGA-A8-A08S-01A-11W-A050-09	52	50	2	39	3.846154e-02	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-A8-A08T-01A-21W-A019-09	49	48	1	39	2.040816e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-A8-A08X-01A-21W-A019-09	17	17	0	13	0	1	exome+100bp flanks	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-A8-A08Z-01A-21W-A019-09	30	30	0	22	0	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-A8-A090-01A-11W-A019-09	35	35	0	26	0	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-A8-A091-01A-11W-A019-09	25	24	1	17	4.000000e-02	1	exome+100bp flanks	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-A8-A092-01A-11W-A019-09	85	77	8	63	9.411765e-02	1	exome+100bp flanks	34834024	14	63	4.019059e-07	1.808577e-06
TCGA-A8-A093-01A-11W-A019-09	101	98	3	74	2.970297e-02	0	coding only	34834024	23	68	6.602740e-07	1.952114e-06
TCGA-A8-A094-01A-11W-A019-09	176	172	4	137	2.272727e-02	0	coding only	34834024	31	128	8.899345e-07	3.674568e-06
TCGA-A8-A095-01A-11W-A019-09	125	117	8	88	6.400000e-02	1	exome+100bp flanks	34834024	28	83	8.038118e-07	2.382728e-06
TCGA-A8-A096-01A-11W-A019-09	28	27	1	25	3.571429e-02	1	exome+100bp flanks	34834024	2	22	5.741513e-08	6.315664e-07
TCGA-A8-A097-01A-11W-A050-09	102	98	4	72	3.921569e-02	1	exome+100bp flanks	34834024	25	64	7.176891e-07	1.837284e-06
TCGA-A8-A099-01A-11W-A019-09	22	21	1	18	4.545455e-02	1	exome+100bp flanks	34834024	2	16	5.741513e-08	4.593210e-07
TCGA-A8-A09A-01A-11W-A019-09	105	98	7	78	6.666667e-02	1	exome+100bp flanks	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-A8-A09B-01A-11W-A019-09	40	35	5	28	1.250000e-01	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-A8-A09C-01A-11W-A019-09	30	28	2	18	6.666667e-02	1	exome+100bp flanks	34834024	10	18	2.870756e-07	5.167362e-07
TCGA-A8-A09D-01A-11W-A019-09	47	40	7	27	1.489362e-01	1	exome+100bp flanks	34834024	13	25	3.731983e-07	7.176891e-07
TCGA-A8-A09E-01A-11W-A019-09	45	43	2	39	4.444444e-02	1	exome+100bp flanks	34834024	4	38	1.148303e-07	1.090887e-06
TCGA-A8-A09G-01A-21W-A019-09	243	235	8	188	3.292181e-02	1	exome+100bp flanks	34834024	45	175	1.291840e-06	5.023824e-06
TCGA-A8-A09I-01A-22W-A050-09	127	123	4	95	3.149606e-02	1	exome+100bp flanks	34834024	25	91	7.176891e-07	2.612388e-06
TCGA-A8-A09K-01A-11W-A019-09	35	34	1	27	2.857143e-02	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-A8-A09M-01A-11W-A019-09	92	89	3	66	3.260870e-02	1	exome+100bp flanks	34834024	22	57	6.315664e-07	1.636331e-06
TCGA-A8-A09N-01A-11W-A019-09	77	71	6	46	7.792208e-02	1	exome+100bp flanks	34834024	23	43	6.602740e-07	1.234425e-06
TCGA-A8-A09Q-01A-11W-A019-09	98	95	3	74	3.061224e-02	1	exome+100bp flanks	34834024	20	71	5.741513e-07	2.038237e-06
TCGA-A8-A09R-01A-11W-A019-09	50	48	2	41	4.000000e-02	1	exome+100bp flanks	34834024	7	40	2.009530e-07	1.148303e-06
TCGA-A8-A09T-01A-11W-A019-09	24	22	2	20	8.333333e-02	1	exome+100bp flanks	34834024	1	20	2.870756e-08	5.741513e-07
TCGA-A8-A09V-01A-11D-A045-09	24	23	1	20	4.166667e-02	1	exome+100bp flanks	34834024	3	19	8.612269e-08	5.454437e-07
TCGA-A8-A09W-01A-11W-A019-09	81	76	5	61	6.172840e-02	1	exome+100bp flanks	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-A8-A09X-01A-11W-A019-09	56	55	1	44	1.785714e-02	1	exome+100bp flanks	34834024	11	41	3.157832e-07	1.177010e-06
TCGA-A8-A09Z-01A-11W-A019-09	1403	1238	165	969	1.176051e-01	1	exome+100bp flanks	34834024	263	914	7.550090e-06	2.623871e-05
TCGA-A8-A0A1-01A-11W-A019-09	37	35	2	30	5.405405e-02	1	exome+100bp flanks	34834024	5	28	1.435378e-07	8.038118e-07
TCGA-A8-A0A2-01A-11W-A050-09	34	32	2	22	5.882353e-02	1	exome+100bp flanks	34834024	10	20	2.870756e-07	5.741513e-07
TCGA-A8-A0A4-01A-11W-A019-09	35	31	4	24	1.142857e-01	1	exome+100bp flanks	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-A8-A0A6-01A-12W-A071-09	3173	2946	227	2051	7.154113e-02	1	exome+100bp flanks	34834024	838	1935	2.405694e-05	5.554914e-05
TCGA-A8-A0A7-01A-11W-A019-09	90	87	3	69	3.333333e-02	1	exome+100bp flanks	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-A8-A0A9-01A-11W-A019-09	47	43	4	37	8.510638e-02	1	exome+100bp flanks	34834024	6	35	1.722454e-07	1.004765e-06
TCGA-A8-A0AB-01A-11W-A050-09	24	22	2	18	8.333333e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-A8-A0AD-01A-11W-A071-09	28	27	1	18	3.571429e-02	1	exome+100bp flanks	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-AC-A23C-01A-12D-A167-09	97	95	2	77	2.061856e-02	1	exome+100bp flanks	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-AC-A23E-01A-11D-A159-09	18	18	0	15	0	1	exome+100bp flanks	34834024	2	13	5.741513e-08	3.731983e-07
TCGA-AC-A23G-01A-11D-A20S-09	30	27	3	19	1.000000e-01	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-AC-A23H-01A-11D-A159-09	4713	4533	180	3459	3.819223e-02	1	exome+100bp flanks	34834024	1004	3194	2.882240e-05	9.169196e-05
TCGA-AC-A2B8-01A-11D-A17D-09	103	96	7	72	6.796117e-02	1	exome+100bp flanks	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-AC-A2BK-01A-11D-A21Q-09	96	77	19	59	1.979167e-01	1	exome+100bp flanks	34834024	17	54	4.880286e-07	1.550208e-06
TCGA-AC-A2BM-01A-11D-A21Q-09	25	20	5	16	2.000000e-01	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-AC-A2FB-01A-11D-A17D-09	17	15	2	12	1.176471e-01	1	exome+100bp flanks	34834024	3	11	8.612269e-08	3.157832e-07
TCGA-AC-A2FE-01A-11D-A19Y-09	34	18	16	15	4.705882e-01	1	exome+100bp flanks	34834024	3	12	8.612269e-08	3.444908e-07
TCGA-AC-A2FF-01A-11D-A17D-09	13	12	1	12	7.692308e-02	1	exome+100bp flanks	34834024	0	12	0	3.444908e-07
TCGA-AC-A2FG-01A-11D-A17D-09	53	47	6	34	1.132075e-01	1	exome+100bp flanks	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-AC-A2FK-01A-12D-A17W-09	1	0	1	0	1	1	exome+100bp flanks	34834024	0	0	0	0
TCGA-AC-A2FM-01A-11D-A19Y-09	60	46	14	33	2.333333e-01	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-AC-A2FO-01A-11D-A17W-09	25	24	1	21	4.000000e-02	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-AC-A2QH-01A-11D-A18P-09	27	27	0	21	0	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-AC-A2QH-01B-04D-A22N-09	60	54	6	48	1.000000e-01	1	exome+100bp flanks	34834024	6	42	1.722454e-07	1.205718e-06
TCGA-AC-A2QI-01A-12D-A19Y-09	91	72	19	54	2.087912e-01	1	exome+100bp flanks	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-AC-A2QJ-01A-12D-A19Y-09	97	38	59	35	6.082474e-01	1	exome+100bp flanks	34834024	1	21	2.870756e-08	6.028589e-07
TCGA-AC-A3BB-01A-21D-A19Y-09	138	78	60	56	4.347826e-01	2	all capture (no interval list)	65505363	16	49	2.442548e-07	7.480304e-07
TCGA-AC-A3EH-01A-22D-A228-09	66	43	23	32	3.484848e-01	1	exome+100bp flanks	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-AC-A3HN-01A-11D-A20S-09	20	17	3	12	1.500000e-01	1	exome+100bp flanks	34834024	5	10	1.435378e-07	2.870756e-07
TCGA-AC-A3OD-01A-11D-A21Q-09	23	21	2	19	8.695652e-02	1	exome+100bp flanks	34834024	2	18	5.741513e-08	5.167362e-07
TCGA-AC-A3OD-01B-06D-A22N-09	126	108	18	88	1.428571e-01	1	exome+100bp flanks	34834024	19	72	5.454437e-07	2.066945e-06
TCGA-AC-A3QP-01A-11D-A22X-09	34	29	5	23	1.470588e-01	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-AC-A3TM-01A-11D-A228-09	105	41	64	35	6.095238e-01	2	all capture (no interval list)	65505363	6	29	9.159555e-08	4.427118e-07
TCGA-AC-A3TN-01A-11D-A228-09	222	82	140	61	6.306306e-01	2	all capture (no interval list)	65505363	15	34	2.289889e-07	5.190415e-07
TCGA-AC-A3W5-01A-11D-A228-09	158	125	33	100	2.088608e-01	1	exome+100bp flanks	34834024	24	88	6.889816e-07	2.526266e-06
TCGA-AC-A3W6-01A-12D-A228-09	270	182	88	140	3.259259e-01	2	all capture (no interval list)	65505363	40	125	6.106370e-07	1.908241e-06
TCGA-AC-A3W7-01A-11D-A228-09	89	71	18	50	2.022472e-01	1	exome+100bp flanks	34834024	18	46	5.167362e-07	1.320548e-06
TCGA-AC-A3YI-01A-21D-A23C-09	20	14	6	12	3.000000e-01	1	exome+100bp flanks	34834024	2	12	5.741513e-08	3.444908e-07
TCGA-AC-A3YJ-01A-11D-A22X-09	35	28	7	19	2.000000e-01	1	exome+100bp flanks	34834024	8	18	2.296605e-07	5.167362e-07
TCGA-AC-A5EH-01A-11D-A28B-09	159	132	27	97	1.698113e-01	1	exome+100bp flanks	34834024	31	87	8.899345e-07	2.497558e-06
TCGA-AC-A5EI-01A-11D-A27P-09	36	31	5	25	1.388889e-01	1	exome+100bp flanks	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-AC-A5XS-01A-11D-A29N-09	557	482	75	358	1.346499e-01	1	exome+100bp flanks	34834024	112	331	3.215247e-06	9.502204e-06
TCGA-AC-A5XU-01A-11D-A28B-09	73	58	15	40	2.054795e-01	1	exome+100bp flanks	34834024	17	35	4.880286e-07	1.004765e-06
TCGA-AC-A62X-01A-11D-A29N-09	68	55	13	45	1.911765e-01	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-AC-A62Y-01A-11D-A29N-09	72	64	8	51	1.111111e-01	1	exome+100bp flanks	34834024	12	45	3.444908e-07	1.291840e-06
TCGA-AN-A03X-01A-21W-A019-09	42	40	2	34	4.761905e-02	1	exome+100bp flanks	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-AN-A03Y-01A-21W-A019-09	29	28	1	21	3.448276e-02	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-AN-A041-01A-11W-A050-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-AN-A046-01A-21W-A050-09	5700	5314	386	4352	6.771930e-02	1	exome+100bp flanks	34834024	894	4017	2.566456e-05	1.153183e-04
TCGA-AN-A049-01A-21W-A019-09	35	34	1	28	2.857143e-02	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-AN-A04A-01A-21W-A050-09	30	27	3	19	1.000000e-01	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-AN-A04C-01A-21W-A050-09	66	63	3	49	4.545455e-02	1	exome+100bp flanks	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-AN-A04D-01A-21W-A050-09	94	90	4	66	4.255319e-02	1	exome+100bp flanks	34834024	23	61	6.602740e-07	1.751161e-06
TCGA-AN-A0AJ-01A-11W-A019-09	78	74	4	55	5.128205e-02	1	exome+100bp flanks	34834024	18	51	5.167362e-07	1.464086e-06
TCGA-AN-A0AK-01A-21W-A019-09	1263	1132	131	876	1.037213e-01	1	exome+100bp flanks	34834024	240	816	6.889816e-06	2.342537e-05
TCGA-AN-A0AL-01A-11W-A019-09	78	72	6	61	7.692308e-02	1	exome+100bp flanks	34834024	10	55	2.870756e-07	1.578916e-06
TCGA-AN-A0AM-01A-11W-A050-09	49	49	0	38	0	1	exome+100bp flanks	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-AN-A0AR-01A-11W-A019-09	115	106	9	86	7.826087e-02	1	exome+100bp flanks	34834024	20	83	5.741513e-07	2.382728e-06
TCGA-AN-A0AS-01A-11W-A019-09	38	38	0	35	0	1	exome+100bp flanks	34834024	3	35	8.612269e-08	1.004765e-06
TCGA-AN-A0AT-01A-11D-A045-09	108	106	2	89	1.851852e-02	0	coding only	34834024	17	84	4.880286e-07	2.411435e-06
TCGA-AN-A0FD-01A-11W-A050-09	40	39	1	32	2.500000e-02	1	exome+100bp flanks	34834024	5	32	1.435378e-07	9.186421e-07
TCGA-AN-A0FF-01A-11W-A050-09	27	23	4	20	1.481481e-01	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-AN-A0FJ-01A-11W-A019-09	84	80	4	64	4.761905e-02	1	exome+100bp flanks	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-AN-A0FK-01A-11W-A050-09	45	43	2	27	4.444444e-02	1	exome+100bp flanks	34834024	15	25	4.306135e-07	7.176891e-07
TCGA-AN-A0FL-01A-11W-A050-09	177	172	5	136	2.824859e-02	0	coding only	34834024	33	127	9.473496e-07	3.645861e-06
TCGA-AN-A0FN-01A-11W-A050-09	32	25	7	23	2.187500e-01	1	exome+100bp flanks	34834024	2	19	5.741513e-08	5.454437e-07
TCGA-AN-A0FS-01A-11W-A050-09	64	59	5	46	7.812500e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-AN-A0FT-01A-11W-A050-09	97	93	4	66	4.123711e-02	1	exome+100bp flanks	34834024	26	59	7.463967e-07	1.693746e-06
TCGA-AN-A0FV-01A-11W-A019-09	82	75	7	55	8.536585e-02	1	exome+100bp flanks	34834024	19	50	5.454437e-07	1.435378e-06
TCGA-AN-A0FW-01A-11W-A050-09	97	91	6	71	6.185567e-02	1	exome+100bp flanks	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-AN-A0FX-01A-11W-A050-09	148	136	12	122	8.108108e-02	1	exome+100bp flanks	34834024	13	112	3.731983e-07	3.215247e-06
TCGA-AN-A0FY-01A-11W-A050-09	51	48	3	44	5.882353e-02	1	exome+100bp flanks	34834024	4	40	1.148303e-07	1.148303e-06
TCGA-AN-A0FZ-01A-11W-A050-09	46	44	2	36	4.347826e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-AN-A0G0-01A-11W-A050-09	39	37	2	33	5.128205e-02	1	exome+100bp flanks	34834024	4	29	1.148303e-07	8.325194e-07
TCGA-AN-A0XL-01A-11D-A10M-09	30	26	4	21	1.333333e-01	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-AN-A0XN-01A-21D-A10G-09	120	118	2	92	1.666667e-02	0	coding only	34834024	22	84	6.315664e-07	2.411435e-06
TCGA-AN-A0XO-01A-11D-A10G-09	27	25	2	20	7.407407e-02	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-AN-A0XP-01A-11D-A117-09	27	25	2	20	7.407407e-02	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-AN-A0XR-01A-11D-A10G-09	34	31	3	26	8.823529e-02	1	exome+100bp flanks	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-AN-A0XS-01A-22D-A10G-09	27	27	0	23	0	1	exome+100bp flanks	34834024	3	22	8.612269e-08	6.315664e-07
TCGA-AN-A0XT-01A-11D-A10G-09	18	14	4	7	2.222222e-01	1	exome+100bp flanks	34834024	5	7	1.435378e-07	2.009530e-07
TCGA-AN-A0XU-01A-11D-A10G-09	97	94	3	77	3.092784e-02	1	exome+100bp flanks	34834024	16	69	4.593210e-07	1.980822e-06
TCGA-AN-A0XV-01A-11D-A10G-09	29	27	2	23	6.896552e-02	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-AN-A0XW-01A-11D-A10G-09	224	216	8	166	3.571429e-02	1	exome+100bp flanks	34834024	46	153	1.320548e-06	4.392257e-06
TCGA-AO-A03L-01A-41W-A071-09	25	22	3	20	1.200000e-01	1	exome+100bp flanks	34834024	2	20	5.741513e-08	5.741513e-07
TCGA-AO-A03M-01B-11D-A10M-09	777	722	55	547	7.078507e-02	1	exome+100bp flanks	34834024	164	496	4.708041e-06	1.423895e-05
TCGA-AO-A03N-01B-11D-A10M-09	101	96	5	68	4.950495e-02	1	exome+100bp flanks	34834024	26	64	7.463967e-07	1.837284e-06
TCGA-AO-A03O-01A-11W-A019-09	62	60	2	53	3.225806e-02	1	exome+100bp flanks	34834024	7	51	2.009530e-07	1.464086e-06
TCGA-AO-A03P-01A-11W-A019-09	49	47	2	36	4.081633e-02	1	exome+100bp flanks	34834024	11	33	3.157832e-07	9.473496e-07
TCGA-AO-A03R-01A-21W-A050-09	43	43	0	30	0	1	exome+100bp flanks	34834024	13	27	3.731983e-07	7.751042e-07
TCGA-AO-A03T-01A-21W-A050-09	92	89	3	71	3.260870e-02	1	exome+100bp flanks	34834024	17	67	4.880286e-07	1.923407e-06
TCGA-AO-A03U-01B-21D-A10M-09	8	8	0	6	0	1	exome+100bp flanks	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-AO-A03V-01A-11D-A10Y-09	52	50	2	43	3.846154e-02	1	exome+100bp flanks	34834024	7	42	2.009530e-07	1.205718e-06
TCGA-AO-A0J2-01A-11W-A050-09	68	63	5	42	7.352941e-02	1	exome+100bp flanks	34834024	20	38	5.741513e-07	1.090887e-06
TCGA-AO-A0J3-01A-11W-A050-09	78	76	2	59	2.564103e-02	1	exome+100bp flanks	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-AO-A0J4-01A-11W-A050-09	85	83	2	65	2.352941e-02	1	exome+100bp flanks	34834024	18	58	5.167362e-07	1.665039e-06
TCGA-AO-A0J5-01A-11W-A050-09	54	53	1	42	1.851852e-02	1	exome+100bp flanks	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-AO-A0J6-01A-11W-A050-09	103	101	2	84	1.941748e-02	0	coding only	34834024	14	76	4.019059e-07	2.181775e-06
TCGA-AO-A0J7-01A-11W-A050-09	22	22	0	19	0	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-AO-A0J8-01A-21D-A045-09	26	23	3	16	1.153846e-01	1	exome+100bp flanks	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-AO-A0J9-01A-11W-A050-09	97	91	6	73	6.185567e-02	1	exome+100bp flanks	34834024	15	67	4.306135e-07	1.923407e-06
TCGA-AO-A0JA-01A-11W-A071-09	30	29	1	23	3.333333e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-AO-A0JB-01A-11W-A071-09	85	74	11	62	1.294118e-01	1	exome+100bp flanks	34834024	10	55	2.870756e-07	1.578916e-06
TCGA-AO-A0JC-01A-11W-A071-09	9	9	0	6	0	1	exome+100bp flanks	34834024	2	4	5.741513e-08	1.148303e-07
TCGA-AO-A0JD-01A-11W-A071-09	105	99	6	82	5.714286e-02	1	exome+100bp flanks	34834024	17	78	4.880286e-07	2.239190e-06
TCGA-AO-A0JE-01A-11W-A071-09	40	40	0	32	0	1	exome+100bp flanks	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-AO-A0JF-01A-11W-A071-09	29	27	2	20	6.896552e-02	1	exome+100bp flanks	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-AO-A0JI-01A-21W-A100-09	15	15	0	13	0	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-AO-A0JJ-01A-11W-A071-09	12	12	0	9	0	1	exome+100bp flanks	34834024	3	9	8.612269e-08	2.583681e-07
TCGA-AO-A0JL-01A-11W-A071-09	62	60	2	47	3.225806e-02	1	exome+100bp flanks	34834024	13	46	3.731983e-07	1.320548e-06
TCGA-AO-A0JM-01A-21W-A071-09	34	30	4	23	1.176471e-01	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-AO-A124-01A-11D-A10M-09	138	131	7	110	5.072464e-02	1	exome+100bp flanks	34834024	20	101	5.741513e-07	2.899464e-06
TCGA-AO-A125-01A-11D-A10M-09	41	38	3	30	7.317073e-02	1	exome+100bp flanks	34834024	8	23	2.296605e-07	6.602740e-07
TCGA-AO-A126-01A-11D-A10M-09	21	19	2	15	9.523810e-02	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-AO-A128-01A-11D-A10M-09	981	918	63	674	6.422018e-02	1	exome+100bp flanks	34834024	226	617	6.487910e-06	1.771257e-05
TCGA-AO-A129-01A-21D-A10M-09	87	87	0	66	0	1	exome+100bp flanks	34834024	21	61	6.028589e-07	1.751161e-06
TCGA-AO-A12A-01A-21D-A10Y-09	15	14	1	10	6.666667e-02	1	exome+100bp flanks	34834024	4	7	1.148303e-07	2.009530e-07
TCGA-AO-A12B-01A-11D-A10M-09	17	16	1	14	5.882353e-02	1	exome+100bp flanks	34834024	1	13	2.870756e-08	3.731983e-07
TCGA-AO-A12D-01A-11D-A10Y-09	36	34	2	25	5.555556e-02	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-AO-A12E-01A-11D-A10M-09	620	493	127	318	2.048387e-01	1	exome+100bp flanks	34834024	134	238	3.846814e-06	6.832400e-06
TCGA-AO-A12F-01A-11D-A10Y-09	31	29	2	26	6.451613e-02	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-AO-A12G-01A-11D-A10M-09	36	33	3	27	8.333333e-02	1	exome+100bp flanks	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-AO-A12H-01A-11D-A10Y-09	21	20	1	16	4.761905e-02	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-AO-A1KO-01A-31D-A188-09	32	31	1	24	3.125000e-02	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-AO-A1KP-01A-11D-A13L-09	21	19	2	14	9.523810e-02	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-AO-A1KR-01A-12D-A142-09	69	66	3	47	4.347826e-02	1	exome+100bp flanks	34834024	18	45	5.167362e-07	1.291840e-06
TCGA-AO-A1KS-01A-11D-A13L-09	42	41	1	28	2.380952e-02	1	exome+100bp flanks	34834024	13	28	3.731983e-07	8.038118e-07
TCGA-AO-A1KT-01A-11D-A13L-09	39	38	1	24	2.564103e-02	1	exome+100bp flanks	34834024	11	23	3.157832e-07	6.602740e-07
TCGA-AQ-A04H-01B-11D-A10M-09	69	67	2	51	2.898551e-02	1	exome+100bp flanks	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-AQ-A04J-01A-02W-A050-09	57	56	1	44	1.754386e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-AQ-A04L-01B-21D-A10M-09	51	45	6	33	1.176471e-01	1	exome+100bp flanks	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-AQ-A0Y5-01A-11D-A14K-09	48	47	1	37	2.083333e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-AQ-A1H2-01A-11D-A13L-09	27	26	1	21	3.703704e-02	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-AQ-A1H3-01A-31D-A13L-09	28	28	0	19	0	1	exome+100bp flanks	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-AQ-A54N-01A-11D-A25Q-09	82	70	12	60	1.463415e-01	1	exome+100bp flanks	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-AQ-A54O-01A-11D-A25Q-09	31	28	3	21	9.677419e-02	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-AR-A0TS-01A-11D-A10Y-09	40	39	1	30	2.500000e-02	1	exome+100bp flanks	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-AR-A0TU-01A-31D-A10G-09	78	75	3	56	3.846154e-02	1	exome+100bp flanks	34834024	18	54	5.167362e-07	1.550208e-06
TCGA-AR-A0TX-01A-11D-A099-09	287	276	11	217	3.832753e-02	1	exome+100bp flanks	34834024	54	197	1.550208e-06	5.655390e-06
TCGA-AR-A0TY-01A-12W-A12T-09	89	83	6	74	6.741573e-02	1	exome+100bp flanks	34834024	9	66	2.583681e-07	1.894699e-06
TCGA-AR-A0U0-01A-11D-A10G-09	49	45	4	39	8.163265e-02	1	exome+100bp flanks	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-AR-A0U1-01A-11D-A10Y-09	66	63	3	54	4.545455e-02	1	exome+100bp flanks	34834024	8	51	2.296605e-07	1.464086e-06
TCGA-AR-A0U2-01A-11D-A10G-09	57	54	3	44	5.263158e-02	1	exome+100bp flanks	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-AR-A0U3-01A-11D-A10G-09	35	33	2	26	5.714286e-02	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-AR-A1AH-01A-11D-A12B-09	94	86	8	57	8.510638e-02	1	exome+100bp flanks	34834024	27	52	7.751042e-07	1.492793e-06
TCGA-AR-A1AI-01A-11D-A12Q-09	61	58	3	47	4.918033e-02	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-AR-A1AJ-01A-21D-A12Q-09	25	23	2	21	8.000000e-02	1	exome+100bp flanks	34834024	2	19	5.741513e-08	5.454437e-07
TCGA-AR-A1AK-01A-21D-A12Q-09	64	58	6	46	9.375000e-02	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-AR-A1AL-01A-21D-A12Q-09	25	23	2	19	8.000000e-02	1	exome+100bp flanks	34834024	3	18	8.612269e-08	5.167362e-07
TCGA-AR-A1AM-01A-41D-A228-09	29	24	5	20	1.724138e-01	1	exome+100bp flanks	34834024	4	17	1.148303e-07	4.880286e-07
TCGA-AR-A1AN-01A-11D-A12Q-09	18	18	0	14	0	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-AR-A1AO-01A-11D-A12Q-09	8	7	1	4	1.250000e-01	1	exome+100bp flanks	34834024	2	4	5.741513e-08	1.148303e-07
TCGA-AR-A1AP-01A-11D-A12Q-09	34	32	2	30	5.882353e-02	1	exome+100bp flanks	34834024	1	25	2.870756e-08	7.176891e-07
TCGA-AR-A1AQ-01A-11D-A12Q-09	43	42	1	35	2.325581e-02	1	exome+100bp flanks	34834024	6	31	1.722454e-07	8.899345e-07
TCGA-AR-A1AR-01A-31D-A135-09	53	51	2	40	3.773585e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-AR-A1AS-01A-11D-A12Q-09	40	38	2	28	5.000000e-02	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-AR-A1AT-01A-11D-A12Q-09	30	28	2	21	6.666667e-02	1	exome+100bp flanks	34834024	6	19	1.722454e-07	5.454437e-07
TCGA-AR-A1AU-01A-11D-A12Q-09	20	18	2	14	1.000000e-01	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-AR-A1AV-01A-21D-A12Q-09	40	38	2	33	5.000000e-02	1	exome+100bp flanks	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-AR-A1AW-01A-21D-A12Q-09	20	19	1	16	5.000000e-02	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-AR-A1AX-01A-11D-A12Q-09	14	13	1	11	7.142857e-02	1	exome+100bp flanks	34834024	1	11	2.870756e-08	3.157832e-07
TCGA-AR-A1AY-01A-21D-A12Q-09	49	48	1	38	2.040816e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-AR-A24H-01A-11D-A167-09	125	121	4	98	3.200000e-02	1	exome+100bp flanks	34834024	20	94	5.741513e-07	2.698511e-06
TCGA-AR-A24K-01A-11D-A167-09	27	26	1	20	3.703704e-02	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-AR-A24L-01A-11D-A167-09	43	42	1	31	2.325581e-02	1	exome+100bp flanks	34834024	11	29	3.157832e-07	8.325194e-07
TCGA-AR-A24M-01A-11D-A167-09	22	19	3	13	1.363636e-01	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-AR-A24N-01A-11D-A167-09	33	29	4	23	1.212121e-01	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-AR-A24O-01A-11D-A167-09	18	17	1	14	5.555556e-02	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-AR-A24P-01A-11D-A167-09	18	17	1	16	5.555556e-02	1	exome+100bp flanks	34834024	1	13	2.870756e-08	3.731983e-07
TCGA-AR-A24Q-01A-12D-A167-09	144	141	3	103	2.083333e-02	0	coding only	34834024	33	98	9.473496e-07	2.813341e-06
TCGA-AR-A24R-01A-11D-A167-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-AR-A24S-01A-11D-A167-09	42	40	2	29	4.761905e-02	1	exome+100bp flanks	34834024	10	25	2.870756e-07	7.176891e-07
TCGA-AR-A24T-01A-11D-A167-09	21	20	1	16	4.761905e-02	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-AR-A24U-01A-11D-A167-09	20	19	1	13	5.000000e-02	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-AR-A24V-01A-21D-A167-09	26	25	1	17	3.846154e-02	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-AR-A24W-01A-11D-A17G-09	7	6	1	6	1.428571e-01	1	exome+100bp flanks	34834024	0	5	0	1.435378e-07
TCGA-AR-A24X-01A-11D-A167-09	29	26	3	17	1.034483e-01	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-AR-A24Z-01A-11D-A167-09	39	38	1	32	2.564103e-02	1	exome+100bp flanks	34834024	6	31	1.722454e-07	8.899345e-07
TCGA-AR-A250-01A-31D-A167-09	67	65	2	50	2.985075e-02	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-AR-A251-01A-12D-A167-09	150	148	2	121	1.333333e-02	0	coding only	34834024	27	114	7.751042e-07	3.272662e-06
TCGA-AR-A252-01A-11D-A167-09	8	8	0	7	0	1	exome+100bp flanks	34834024	1	7	2.870756e-08	2.009530e-07
TCGA-AR-A254-01A-21D-A167-09	31	29	2	23	6.451613e-02	1	exome+100bp flanks	34834024	6	23	1.722454e-07	6.602740e-07
TCGA-AR-A255-01A-11D-A167-09	56	53	3	43	5.357143e-02	1	exome+100bp flanks	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-AR-A256-01A-11D-A167-09	186	179	7	138	3.763441e-02	1	exome+100bp flanks	34834024	39	133	1.119595e-06	3.818106e-06
TCGA-AR-A2LE-01A-11D-A17W-09	315	298	17	219	5.396825e-02	1	exome+100bp flanks	34834024	71	213	2.038237e-06	6.114711e-06
TCGA-AR-A2LH-01A-31D-A18P-09	21	21	0	18	0	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-AR-A2LJ-01A-12D-A19Y-09	15	11	4	8	2.666667e-01	1	exome+100bp flanks	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-AR-A2LK-01A-11D-A17W-09	37	37	0	27	0	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-AR-A2LL-01A-11D-A17W-09	29	29	0	25	0	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-AR-A2LM-01A-11D-A17W-09	15	14	1	11	6.666667e-02	1	exome+100bp flanks	34834024	3	11	8.612269e-08	3.157832e-07
TCGA-AR-A2LN-01A-21D-A18P-09	37	37	0	25	0	1	exome+100bp flanks	34834024	11	20	3.157832e-07	5.741513e-07
TCGA-AR-A2LO-01A-31D-A18P-09	12	11	1	10	8.333333e-02	1	exome+100bp flanks	34834024	1	10	2.870756e-08	2.870756e-07
TCGA-AR-A2LQ-01A-22D-A18P-09	6	4	2	3	3.333333e-01	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-AR-A2LR-01A-12D-A18P-09	61	59	2	46	3.278689e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-AR-A5QM-01A-11D-A27P-09	34	24	10	20	2.941176e-01	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-AR-A5QN-01A-12D-A28B-09	43	35	8	26	1.860465e-01	1	exome+100bp flanks	34834024	8	23	2.296605e-07	6.602740e-07
TCGA-AR-A5QP-01A-11D-A28B-09	26	23	3	21	1.153846e-01	1	exome+100bp flanks	34834024	1	19	2.870756e-08	5.454437e-07
TCGA-AR-A5QQ-01A-11D-A28B-09	61	53	8	42	1.311475e-01	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-B6-A0I1-01A-11D-A21Q-09	64	49	15	37	2.343750e-01	1	exome+100bp flanks	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-B6-A0I2-01A-11W-A050-09	51	48	3	39	5.882353e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-B6-A0I5-01A-11W-A100-09	23	20	3	16	1.304348e-01	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-B6-A0I6-01A-11D-A128-09	102	90	12	69	1.176471e-01	1	exome+100bp flanks	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-B6-A0I8-01A-11W-A050-09	106	103	3	76	2.830189e-02	0	coding only	34834024	26	69	7.463967e-07	1.980822e-06
TCGA-B6-A0I9-01A-11W-A050-09	73	68	5	57	6.849315e-02	1	exome+100bp flanks	34834024	11	55	3.157832e-07	1.578916e-06
TCGA-B6-A0IA-01A-11W-A050-09	48	46	2	40	4.166667e-02	1	exome+100bp flanks	34834024	5	37	1.435378e-07	1.062180e-06
TCGA-B6-A0IB-01A-11W-A050-09	57	57	0	49	0	1	exome+100bp flanks	34834024	8	43	2.296605e-07	1.234425e-06
TCGA-B6-A0IC-01A-11W-A050-09	46	41	5	34	1.086957e-01	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-B6-A0IE-01A-11W-A050-09	31	29	2	26	6.451613e-02	1	exome+100bp flanks	34834024	3	25	8.612269e-08	7.176891e-07
TCGA-B6-A0IG-01A-11W-A050-09	45	42	3	37	6.666667e-02	1	exome+100bp flanks	34834024	5	35	1.435378e-07	1.004765e-06
TCGA-B6-A0IH-01A-11D-A10Y-09	23	23	0	20	0	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-B6-A0IJ-01A-11W-A050-09	135	126	9	107	6.666667e-02	1	exome+100bp flanks	34834024	18	97	5.167362e-07	2.784634e-06
TCGA-B6-A0IK-01A-12W-A071-09	150	137	13	105	8.666667e-02	1	exome+100bp flanks	34834024	30	99	8.612269e-07	2.842049e-06
TCGA-B6-A0IM-01A-11W-A050-09	35	33	2	26	5.714286e-02	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-B6-A0IN-01A-11W-A050-09	40	34	6	25	1.500000e-01	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-B6-A0IO-01A-11W-A050-09	68	62	6	46	8.823529e-02	1	exome+100bp flanks	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-B6-A0IP-01A-11D-A045-09	26	25	1	21	3.846154e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-B6-A0IQ-01A-11W-A050-09	58	56	2	44	3.448276e-02	1	exome+100bp flanks	34834024	9	42	2.583681e-07	1.205718e-06
TCGA-B6-A0RE-01A-11W-A071-09	103	99	4	78	3.883495e-02	1	exome+100bp flanks	34834024	21	73	6.028589e-07	2.095652e-06
TCGA-B6-A0RG-01A-11W-A071-09	60	57	3	48	5.000000e-02	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-B6-A0RH-01A-21D-A10Y-09	40	36	4	29	1.000000e-01	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-B6-A0RI-01A-11W-A071-09	17	16	1	13	5.882353e-02	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-B6-A0RN-01A-12D-A099-09	38	37	1	26	2.631579e-02	1	exome+100bp flanks	34834024	11	25	3.157832e-07	7.176891e-07
TCGA-B6-A0RO-01A-22D-A099-09	37	34	3	28	8.108108e-02	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-B6-A0RP-01A-21D-A099-09	20	19	1	16	5.000000e-02	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-B6-A0RQ-01A-11D-A10Y-09	17	15	2	10	1.176471e-01	1	exome+100bp flanks	34834024	4	10	1.148303e-07	2.870756e-07
TCGA-B6-A0RT-01A-21D-A099-09	12	12	0	11	0	1	exome+100bp flanks	34834024	1	11	2.870756e-08	3.157832e-07
TCGA-B6-A0RU-01A-11D-A099-09	43	41	2	33	4.651163e-02	1	exome+100bp flanks	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-B6-A0RV-01A-11D-A099-09	46	44	2	30	4.347826e-02	1	exome+100bp flanks	34834024	14	25	4.019059e-07	7.176891e-07
TCGA-B6-A0WS-01A-11D-A10Y-09	22	22	0	12	0	1	exome+100bp flanks	34834024	9	12	2.583681e-07	3.444908e-07
TCGA-B6-A0WT-01A-11D-A10G-09	19	18	1	13	5.263158e-02	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-B6-A0WV-01A-11D-A10G-09	29	27	2	22	6.896552e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-B6-A0WW-01A-11D-A10G-09	37	37	0	28	0	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-B6-A0WX-01A-11D-A10G-09	30	30	0	22	0	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-B6-A0WY-01A-11D-A10G-09	15	12	3	11	2.000000e-01	1	exome+100bp flanks	34834024	1	10	2.870756e-08	2.870756e-07
TCGA-B6-A0WZ-01A-11D-A10G-09	39	39	0	23	0	1	exome+100bp flanks	34834024	14	22	4.019059e-07	6.315664e-07
TCGA-B6-A0X0-01A-21D-A10Y-09	21	20	1	15	4.761905e-02	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-B6-A0X1-01A-11D-A10G-09	64	56	8	44	1.250000e-01	1	exome+100bp flanks	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-B6-A0X4-01A-11D-A10G-09	19	19	0	15	0	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-B6-A0X5-01A-21D-A10G-09	33	31	2	21	6.060606e-02	1	exome+100bp flanks	34834024	10	19	2.870756e-07	5.454437e-07
TCGA-B6-A0X7-01A-11D-A10M-09	19	16	3	11	1.578947e-01	1	exome+100bp flanks	34834024	5	11	1.435378e-07	3.157832e-07
TCGA-B6-A1KC-01B-11D-A159-09	26	24	2	17	7.692308e-02	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-B6-A1KF-01A-11D-A13L-09	50	49	1	35	2.000000e-02	1	exome+100bp flanks	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-B6-A1KI-01A-11D-A14K-09	20	18	2	12	1.000000e-01	1	exome+100bp flanks	34834024	6	11	1.722454e-07	3.157832e-07
TCGA-B6-A1KN-01A-11D-A13L-09	55	53	2	44	3.636364e-02	1	exome+100bp flanks	34834024	7	40	2.009530e-07	1.148303e-06
TCGA-B6-A2IU-01A-32D-A19T-09	43	40	3	31	6.976744e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-B6-A3ZX-01A-11D-A23C-09	57	49	8	33	1.403509e-01	1	exome+100bp flanks	34834024	15	30	4.306135e-07	8.612269e-07
TCGA-B6-A400-01A-11D-A23C-09	134	112	22	90	1.641791e-01	1	exome+100bp flanks	34834024	21	88	6.028589e-07	2.526266e-06
TCGA-B6-A401-01A-11D-A23C-09	24	20	4	16	1.666667e-01	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-B6-A402-01A-11D-A23C-09	67	52	15	36	2.238806e-01	1	exome+100bp flanks	34834024	11	30	3.157832e-07	8.612269e-07
TCGA-B6-A408-01A-12D-A243-09	52	42	10	28	1.923077e-01	1	exome+100bp flanks	34834024	13	25	3.731983e-07	7.176891e-07
TCGA-B6-A409-01A-11D-A243-09	37	32	5	21	1.351351e-01	1	exome+100bp flanks	34834024	9	20	2.583681e-07	5.741513e-07
TCGA-B6-A40B-01A-11D-A23C-09	63	52	11	39	1.746032e-01	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-B6-A40C-01A-11D-A23C-09	40	38	2	28	5.000000e-02	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-BH-A0AU-01A-11D-A12Q-09	20	20	0	14	0	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-BH-A0AV-01A-31D-A10Y-09	67	61	6	47	8.955224e-02	1	exome+100bp flanks	34834024	12	46	3.444908e-07	1.320548e-06
TCGA-BH-A0AW-01A-11W-A071-09	146	140	6	104	4.109589e-02	1	exome+100bp flanks	34834024	34	99	9.760572e-07	2.842049e-06
TCGA-BH-A0AY-01A-21W-A019-09	56	51	5	42	8.928571e-02	1	exome+100bp flanks	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-BH-A0AZ-01A-21D-A12Q-09	57	56	1	45	1.754386e-02	1	exome+100bp flanks	34834024	11	40	3.157832e-07	1.148303e-06
TCGA-BH-A0B0-01A-21D-A10Y-09	51	49	2	35	3.921569e-02	1	exome+100bp flanks	34834024	12	30	3.444908e-07	8.612269e-07
TCGA-BH-A0B1-01A-12W-A071-09	59	58	1	46	1.694915e-02	1	exome+100bp flanks	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-BH-A0B3-01A-11W-A071-09	38	34	4	27	1.052632e-01	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-BH-A0B4-01A-11W-A019-09	64	59	5	53	7.812500e-02	1	exome+100bp flanks	34834024	6	50	1.722454e-07	1.435378e-06
TCGA-BH-A0B5-01A-11D-A12Q-09	64	62	2	50	3.125000e-02	1	exome+100bp flanks	34834024	10	45	2.870756e-07	1.291840e-06
TCGA-BH-A0B6-01A-11D-A19Y-09	830	706	124	493	1.493976e-01	1	exome+100bp flanks	34834024	196	453	5.626683e-06	1.300453e-05
TCGA-BH-A0B7-01A-12D-A10Y-09	14	13	1	11	7.142857e-02	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-BH-A0B8-01A-21W-A071-09	42	40	2	32	4.761905e-02	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-BH-A0B9-01A-11W-A071-09	38	38	0	31	0	1	exome+100bp flanks	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-BH-A0BA-01A-11W-A071-09	31	28	3	23	9.677419e-02	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-BH-A0BC-01A-22D-A099-09	33	32	1	22	3.030303e-02	1	exome+100bp flanks	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-BH-A0BD-01A-11W-A050-09	18	17	1	15	5.555556e-02	1	exome+100bp flanks	34834024	2	13	5.741513e-08	3.731983e-07
TCGA-BH-A0BF-01A-21D-A12Q-09	30	27	3	17	1.000000e-01	1	exome+100bp flanks	34834024	10	16	2.870756e-07	4.593210e-07
TCGA-BH-A0BG-01A-11D-A10Y-09	42	37	5	27	1.190476e-01	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-BH-A0BJ-01A-11W-A071-09	28	26	2	23	7.142857e-02	1	exome+100bp flanks	34834024	3	23	8.612269e-08	6.602740e-07
TCGA-BH-A0BL-01A-11D-A10Y-09	52	49	3	42	5.769231e-02	1	exome+100bp flanks	34834024	5	39	1.435378e-07	1.119595e-06
TCGA-BH-A0BM-01A-11W-A071-09	40	37	3	28	7.500000e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-BH-A0BO-01A-23D-A12B-09	24	22	2	19	8.333333e-02	1	exome+100bp flanks	34834024	2	19	5.741513e-08	5.454437e-07
TCGA-BH-A0BP-01A-11D-A10Y-09	136	132	4	105	2.941176e-02	0	coding only	34834024	25	97	7.176891e-07	2.784634e-06
TCGA-BH-A0BQ-01A-21D-A10Y-09	22	21	1	15	4.545455e-02	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-BH-A0BR-01A-21W-A12T-09	59	58	1	49	1.694915e-02	1	exome+100bp flanks	34834024	7	44	2.009530e-07	1.263133e-06
TCGA-BH-A0BS-01A-11D-A12Q-09	14	14	0	9	0	1	exome+100bp flanks	34834024	5	9	1.435378e-07	2.583681e-07
TCGA-BH-A0BT-01A-11D-A12Q-09	34	30	4	26	1.176471e-01	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-BH-A0BV-01A-11W-A019-09	33	32	1	26	3.030303e-02	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-BH-A0BW-01A-11D-A10Y-09	90	86	4	69	4.444444e-02	1	exome+100bp flanks	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-BH-A0BZ-01A-31D-A12Q-09	222	213	9	177	4.054054e-02	1	exome+100bp flanks	34834024	34	171	9.760572e-07	4.908994e-06
TCGA-BH-A0C0-01A-21W-A071-09	73	69	4	60	5.479452e-02	1	exome+100bp flanks	34834024	9	56	2.583681e-07	1.607624e-06
TCGA-BH-A0C1-01B-11D-A12B-09	33	30	3	22	9.090909e-02	1	exome+100bp flanks	34834024	6	19	1.722454e-07	5.454437e-07
TCGA-BH-A0C3-01A-21D-A12Q-09	14	14	0	10	0	1	exome+100bp flanks	34834024	4	9	1.148303e-07	2.583681e-07
TCGA-BH-A0C7-01B-11D-A10Y-09	37	34	3	25	8.108108e-02	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-BH-A0DD-01A-31D-A12Q-09	21	21	0	13	0	1	exome+100bp flanks	34834024	7	11	2.009530e-07	3.157832e-07
TCGA-BH-A0DE-01A-11D-A10Y-09	31	28	3	22	9.677419e-02	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-BH-A0DG-01A-21D-A12Q-09	24	24	0	22	0	1	exome+100bp flanks	34834024	1	22	2.870756e-08	6.315664e-07
TCGA-BH-A0DH-01A-11D-A099-09	39	36	3	29	7.692308e-02	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-BH-A0DI-01A-21D-A12Q-09	31	29	2	22	6.451613e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-BH-A0DK-01A-21W-A071-09	89	82	7	68	7.865169e-02	1	exome+100bp flanks	34834024	13	66	3.731983e-07	1.894699e-06
TCGA-BH-A0DL-01A-11D-A10Y-09	43	41	2	35	4.651163e-02	1	exome+100bp flanks	34834024	5	33	1.435378e-07	9.473496e-07
TCGA-BH-A0DO-01B-11D-A12B-09	22	19	3	13	1.363636e-01	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-BH-A0DP-01A-21W-A071-09	40	38	2	31	5.000000e-02	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-BH-A0DQ-01A-11D-A099-09	27	27	0	22	0	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-BH-A0DS-01A-11W-A071-09	31	25	6	18	1.935484e-01	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-BH-A0DT-01A-21D-A12B-09	14	14	0	12	0	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-BH-A0DV-01A-21D-A12Q-09	5	5	0	4	0	1	exome+100bp flanks	34834024	1	4	2.870756e-08	1.148303e-07
TCGA-BH-A0DX-01A-11D-A10Y-09	60	59	1	51	1.666667e-02	1	exome+100bp flanks	34834024	7	46	2.009530e-07	1.320548e-06
TCGA-BH-A0DZ-01A-11W-A019-09	266	254	12	174	4.511278e-02	1	exome+100bp flanks	34834024	74	165	2.124360e-06	4.736748e-06
TCGA-BH-A0E0-01A-11W-A071-09	29	27	2	22	6.896552e-02	1	exome+100bp flanks	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-BH-A0E1-01A-11W-A071-09	34	34	0	24	0	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-BH-A0E2-01A-11W-A071-09	35	35	0	30	0	1	exome+100bp flanks	34834024	5	30	1.435378e-07	8.612269e-07
TCGA-BH-A0E6-01A-11W-A050-09	55	49	6	41	1.090909e-01	1	exome+100bp flanks	34834024	8	40	2.296605e-07	1.148303e-06
TCGA-BH-A0E7-01A-11W-A050-09	48	45	3	35	6.250000e-02	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-BH-A0E9-01B-11D-A10Y-09	12	11	1	9	8.333333e-02	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-BH-A0EA-01A-11D-A10Y-09	21	20	1	17	4.761905e-02	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-BH-A0EB-01A-11W-A050-09	38	34	4	26	1.052632e-01	1	exome+100bp flanks	34834024	8	23	2.296605e-07	6.602740e-07
TCGA-BH-A0EE-01A-11W-A050-09	80	73	7	60	8.750000e-02	1	exome+100bp flanks	34834024	12	56	3.444908e-07	1.607624e-06
TCGA-BH-A0EI-01A-11D-A10Y-09	18	16	2	13	1.111111e-01	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-BH-A0GY-01A-11W-A071-09	45	43	2	38	4.444444e-02	1	exome+100bp flanks	34834024	4	34	1.148303e-07	9.760572e-07
TCGA-BH-A0GZ-01A-11W-A071-09	27	25	2	21	7.407407e-02	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-BH-A0H0-01A-11W-A071-09	20	19	1	13	5.000000e-02	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-BH-A0H3-01A-11D-A12Q-09	16	16	0	13	0	1	exome+100bp flanks	34834024	1	13	2.870756e-08	3.731983e-07
TCGA-BH-A0H5-01A-21D-A10Y-09	8	7	1	5	1.250000e-01	1	exome+100bp flanks	34834024	2	4	5.741513e-08	1.148303e-07
TCGA-BH-A0H6-01A-21W-A071-09	17	15	2	11	1.176471e-01	1	exome+100bp flanks	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-BH-A0H7-01A-13W-A071-09	63	59	4	48	6.349206e-02	1	exome+100bp flanks	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-BH-A0H9-01A-11W-A071-09	40	37	3	30	7.500000e-02	1	exome+100bp flanks	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-BH-A0HA-01A-11D-A12Q-09	284	270	14	213	4.929577e-02	1	exome+100bp flanks	34834024	48	201	1.377963e-06	5.770221e-06
TCGA-BH-A0HB-01A-11W-A071-09	33	31	2	26	6.060606e-02	1	exome+100bp flanks	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-BH-A0HF-01A-11W-A071-09	916	850	66	556	7.205240e-02	1	exome+100bp flanks	34834024	284	529	8.152948e-06	1.518630e-05
TCGA-BH-A0HI-01A-11D-A099-09	25	23	2	20	8.000000e-02	1	exome+100bp flanks	34834024	3	18	8.612269e-08	5.167362e-07
TCGA-BH-A0HK-01A-11W-A071-09	104	98	6	72	5.769231e-02	1	exome+100bp flanks	34834024	24	66	6.889816e-07	1.894699e-06
TCGA-BH-A0HL-01A-11W-A050-09	35	33	2	26	5.714286e-02	1	exome+100bp flanks	34834024	6	26	1.722454e-07	7.463967e-07
TCGA-BH-A0HN-01A-11D-A099-09	27	25	2	20	7.407407e-02	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-BH-A0HO-01A-11W-A050-09	22	20	2	14	9.090909e-02	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-BH-A0HP-01A-12D-A099-09	236	229	7	168	2.966102e-02	0	coding only	34834024	53	157	1.521501e-06	4.507088e-06
TCGA-BH-A0HQ-01A-11W-A050-09	32	30	2	23	6.250000e-02	1	exome+100bp flanks	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-BH-A0HU-01A-11W-A050-09	34	30	4	24	1.176471e-01	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-BH-A0HW-01A-11W-A050-09	39	37	2	28	5.128205e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-BH-A0HX-01A-21W-A071-09	56	55	1	44	1.785714e-02	1	exome+100bp flanks	34834024	11	44	3.157832e-07	1.263133e-06
TCGA-BH-A0HY-01A-11W-A071-09	53	51	2	39	3.773585e-02	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-BH-A0RX-01A-21D-A099-09	18	17	1	14	5.555556e-02	1	exome+100bp flanks	34834024	3	14	8.612269e-08	4.019059e-07
TCGA-BH-A0W3-01A-11D-A10G-09	20	18	2	12	1.000000e-01	1	exome+100bp flanks	34834024	6	12	1.722454e-07	3.444908e-07
TCGA-BH-A0W4-01A-11D-A10G-09	30	28	2	24	6.666667e-02	1	exome+100bp flanks	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-BH-A0W5-01A-11D-A10G-09	25	24	1	21	4.000000e-02	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-BH-A0W7-01A-11D-A10Y-09	176	168	8	117	4.545455e-02	1	exome+100bp flanks	34834024	48	110	1.377963e-06	3.157832e-06
TCGA-BH-A0WA-01A-11D-A10G-09	87	80	7	66	8.045977e-02	1	exome+100bp flanks	34834024	11	64	3.157832e-07	1.837284e-06
TCGA-BH-A18F-01A-11D-A12B-09	54	50	4	36	7.407407e-02	1	exome+100bp flanks	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-BH-A18G-01A-11D-A12B-09	1470	1319	151	1017	1.027211e-01	1	exome+100bp flanks	34834024	287	934	8.239071e-06	2.681287e-05
TCGA-BH-A18H-01A-11D-A12B-09	29	29	0	24	0	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BH-A18I-01A-11D-A12B-09	24	22	2	19	8.333333e-02	1	exome+100bp flanks	34834024	3	19	8.612269e-08	5.454437e-07
TCGA-BH-A18J-01A-11D-A12B-09	63	58	5	45	7.936508e-02	1	exome+100bp flanks	34834024	13	37	3.731983e-07	1.062180e-06
TCGA-BH-A18K-01A-11D-A12B-09	43	42	1	30	2.325581e-02	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-BH-A18L-01A-32D-A12B-09	40	35	5	26	1.250000e-01	1	exome+100bp flanks	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-BH-A18M-01A-11D-A12B-09	13	12	1	11	7.692308e-02	1	exome+100bp flanks	34834024	1	10	2.870756e-08	2.870756e-07
TCGA-BH-A18N-01A-11D-A12B-09	31	31	0	24	0	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-BH-A18P-01A-11D-A12B-09	315	304	11	222	3.492063e-02	1	exome+100bp flanks	34834024	74	208	2.124360e-06	5.971173e-06
TCGA-BH-A18Q-01A-12D-A12B-09	78	77	1	56	1.282051e-02	1	exome+100bp flanks	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-BH-A18R-01A-11D-A12B-09	26	25	1	18	3.846154e-02	1	exome+100bp flanks	34834024	7	15	2.009530e-07	4.306135e-07
TCGA-BH-A18S-01A-11D-A12B-09	25	23	2	17	8.000000e-02	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-BH-A18T-01A-11D-A12B-09	72	67	5	51	6.944444e-02	1	exome+100bp flanks	34834024	15	50	4.306135e-07	1.435378e-06
TCGA-BH-A18U-01A-21D-A12B-09	96	92	4	61	4.166667e-02	1	exome+100bp flanks	34834024	26	58	7.463967e-07	1.665039e-06
TCGA-BH-A18V-01A-11D-A12B-09	182	175	7	133	3.846154e-02	1	exome+100bp flanks	34834024	40	123	1.148303e-06	3.531030e-06
TCGA-BH-A1EN-01A-11D-A17G-09	47	44	3	31	6.382979e-02	1	exome+100bp flanks	34834024	13	28	3.731983e-07	8.038118e-07
TCGA-BH-A1EO-01A-11D-A135-09	33	30	3	27	9.090909e-02	1	exome+100bp flanks	34834024	1	25	2.870756e-08	7.176891e-07
TCGA-BH-A1ES-01A-11D-A135-09	18	16	2	15	1.111111e-01	1	exome+100bp flanks	34834024	1	13	2.870756e-08	3.731983e-07
TCGA-BH-A1ET-01A-11D-A135-09	23	23	0	17	0	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-BH-A1EU-01A-11D-A135-09	16	16	0	13	0	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-BH-A1EV-01A-11D-A135-09	84	83	1	65	1.190476e-02	1	exome+100bp flanks	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-BH-A1EW-01A-11D-A135-09	14	11	3	9	2.142857e-01	1	exome+100bp flanks	34834024	2	7	5.741513e-08	2.009530e-07
TCGA-BH-A1EX-01A-11D-A13L-09	13	12	1	11	7.692308e-02	1	exome+100bp flanks	34834024	1	11	2.870756e-08	3.157832e-07
TCGA-BH-A1EY-01A-11D-A13L-09	43	42	1	27	2.325581e-02	1	exome+100bp flanks	34834024	14	25	4.019059e-07	7.176891e-07
TCGA-BH-A1F0-01A-11D-A135-09	21	21	0	15	0	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-BH-A1F2-01A-31D-A13L-09	46	44	2	31	4.347826e-02	1	exome+100bp flanks	34834024	13	27	3.731983e-07	7.751042e-07
TCGA-BH-A1F5-01A-12D-A13L-09	31	30	1	23	3.225806e-02	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-BH-A1F6-01A-11D-A13L-09	67	64	3	44	4.477612e-02	1	exome+100bp flanks	34834024	20	39	5.741513e-07	1.119595e-06
TCGA-BH-A1F8-01A-11D-A13L-09	135	131	4	101	2.962963e-02	0	coding only	34834024	26	90	7.463967e-07	2.583681e-06
TCGA-BH-A1FC-01A-11D-A13L-09	74	70	4	59	5.405405e-02	1	exome+100bp flanks	34834024	9	52	2.583681e-07	1.492793e-06
TCGA-BH-A1FD-01A-11W-A14Q-09	28	26	2	21	7.142857e-02	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-BH-A1FE-01A-11D-A13L-09	13	11	2	10	1.538462e-01	1	exome+100bp flanks	34834024	1	10	2.870756e-08	2.870756e-07
TCGA-BH-A1FG-01A-11D-A13L-09	17	17	0	13	0	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-BH-A1FH-01A-12D-A13L-09	4	4	0	2	0	1	exome+100bp flanks	34834024	2	2	5.741513e-08	5.741513e-08
TCGA-BH-A1FJ-01A-11D-A13L-09	27	26	1	18	3.703704e-02	1	exome+100bp flanks	34834024	8	18	2.296605e-07	5.167362e-07
TCGA-BH-A1FL-01A-11D-A13L-09	23	22	1	19	4.347826e-02	1	exome+100bp flanks	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-BH-A1FM-01A-11D-A13L-09	37	35	2	30	5.405405e-02	1	exome+100bp flanks	34834024	5	28	1.435378e-07	8.038118e-07
TCGA-BH-A1FN-01A-11D-A13L-09	109	107	2	84	1.834862e-02	0	coding only	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-BH-A1FR-01A-11D-A13L-09	13	13	0	12	0	1	exome+100bp flanks	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-BH-A1FU-01A-11D-A14G-09	27	27	0	21	0	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-BH-A201-01A-11D-A14K-09	17	16	1	14	5.882353e-02	1	exome+100bp flanks	34834024	1	14	2.870756e-08	4.019059e-07
TCGA-BH-A202-01A-11D-A14K-09	28	27	1	23	3.571429e-02	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-BH-A203-01A-12D-A167-09	59	59	0	38	0	1	exome+100bp flanks	34834024	21	33	6.028589e-07	9.473496e-07
TCGA-BH-A204-01A-11D-A159-09	40	37	3	31	7.500000e-02	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-BH-A208-01A-11D-A159-09	57	54	3	44	5.263158e-02	1	exome+100bp flanks	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-BH-A209-01A-11D-A17G-09	75	74	1	55	1.333333e-02	1	exome+100bp flanks	34834024	19	49	5.454437e-07	1.406671e-06
TCGA-BH-A28O-01A-11D-A228-09	24	18	6	12	2.500000e-01	1	exome+100bp flanks	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-BH-A28Q-01A-11D-A16D-09	23	22	1	15	4.347826e-02	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-BH-A2L8-01A-11D-A18P-09	416	401	15	289	3.605769e-02	1	exome+100bp flanks	34834024	107	265	3.071709e-06	7.607505e-06
TCGA-BH-A42T-01A-11D-A243-09	37	31	6	24	1.621622e-01	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-BH-A42U-01A-12D-A243-09	14	10	4	8	2.857143e-01	1	exome+100bp flanks	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-BH-A42V-01A-11D-A243-09	37	34	3	30	8.108108e-02	1	exome+100bp flanks	34834024	3	29	8.612269e-08	8.325194e-07
TCGA-BH-A5IZ-01A-11D-A27P-09	93	75	18	59	1.935484e-01	1	exome+100bp flanks	34834024	14	55	4.019059e-07	1.578916e-06
TCGA-BH-A5J0-01A-11D-A27P-09	67	58	9	49	1.343284e-01	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-C8-A12K-01A-21D-A10Y-09	107	105	2	78	1.869159e-02	0	coding only	34834024	25	75	7.176891e-07	2.153067e-06
TCGA-C8-A12L-01A-11D-A10Y-09	72	67	5	56	6.944444e-02	1	exome+100bp flanks	34834024	11	53	3.157832e-07	1.521501e-06
TCGA-C8-A12M-01A-11D-A135-09	57	55	2	44	3.508772e-02	1	exome+100bp flanks	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-C8-A12N-01A-11D-A10Y-09	24	24	0	16	0	1	exome+100bp flanks	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-C8-A12O-01A-11D-A10Y-09	30	28	2	24	6.666667e-02	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-C8-A12P-01A-11D-A10Y-09	155	147	8	113	5.161290e-02	1	exome+100bp flanks	34834024	33	107	9.473496e-07	3.071709e-06
TCGA-C8-A12Q-01A-11D-A10Y-09	100	96	4	73	4.000000e-02	1	exome+100bp flanks	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-C8-A12T-01A-11D-A10Y-09	154	149	5	120	3.246753e-02	1	exome+100bp flanks	34834024	27	110	7.751042e-07	3.157832e-06
TCGA-C8-A12U-01A-11D-A10Y-09	36	34	2	27	5.555556e-02	1	exome+100bp flanks	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-C8-A12V-01A-11D-A10Y-09	15	13	2	11	1.333333e-01	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-C8-A12W-01A-11D-A10Y-09	46	43	3	34	6.521739e-02	1	exome+100bp flanks	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-C8-A12X-01A-11D-A10Y-09	44	43	1	33	2.272727e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-C8-A12Y-01A-11D-A12B-09	32	29	3	20	9.375000e-02	1	exome+100bp flanks	34834024	9	19	2.583681e-07	5.454437e-07
TCGA-C8-A12Z-01A-11D-A10Y-09	48	47	1	37	2.083333e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-C8-A130-01A-31D-A10Y-09	39	36	3	23	7.692308e-02	1	exome+100bp flanks	34834024	13	21	3.731983e-07	6.028589e-07
TCGA-C8-A131-01A-11D-A10Y-09	55	51	4	39	7.272727e-02	1	exome+100bp flanks	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-C8-A132-01A-31D-A10Y-09	50	49	1	38	2.000000e-02	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-C8-A133-01A-32D-A12B-09	22	22	0	17	0	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-C8-A134-01A-11D-A10Y-09	96	93	3	72	3.125000e-02	1	exome+100bp flanks	34834024	19	65	5.454437e-07	1.865992e-06
TCGA-C8-A135-01A-11D-A10Y-09	49	45	4	36	8.163265e-02	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-C8-A137-01A-11D-A10Y-09	47	45	2	36	4.255319e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-C8-A138-01A-11D-A10Y-09	47	43	4	34	8.510638e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-C8-A1HE-01A-11D-A188-09	39	39	0	29	0	1	exome+100bp flanks	34834024	10	25	2.870756e-07	7.176891e-07
TCGA-C8-A1HF-01A-11D-A135-09	33	28	5	21	1.515152e-01	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-C8-A1HG-01A-11D-A135-09	45	41	4	25	8.888889e-02	1	exome+100bp flanks	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-C8-A1HI-01A-11D-A135-09	37	34	3	25	8.108108e-02	1	exome+100bp flanks	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-C8-A1HJ-01A-11D-A13L-09	116	108	8	85	6.896552e-02	1	exome+100bp flanks	34834024	20	83	5.741513e-07	2.382728e-06
TCGA-C8-A1HK-01A-21D-A13L-09	50	49	1	40	2.000000e-02	1	exome+100bp flanks	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-C8-A1HL-01A-11D-A135-09	29	29	0	22	0	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-C8-A1HM-01A-12D-A135-09	300	286	14	224	4.666667e-02	1	exome+100bp flanks	34834024	56	208	1.607624e-06	5.971173e-06
TCGA-C8-A1HN-01A-11D-A135-09	49	47	2	33	4.081633e-02	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-C8-A1HO-01A-11D-A13L-09	26	26	0	16	0	1	exome+100bp flanks	34834024	9	16	2.583681e-07	4.593210e-07
TCGA-C8-A26V-01A-11D-A16D-09	75	74	1	55	1.333333e-02	1	exome+100bp flanks	34834024	18	51	5.167362e-07	1.464086e-06
TCGA-C8-A26W-01A-11D-A16D-09	50	50	0	37	0	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-C8-A26X-01A-31D-A16D-09	45	44	1	38	2.222222e-02	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-C8-A26Y-01A-11D-A16D-09	694	665	29	516	4.178674e-02	1	exome+100bp flanks	34834024	134	476	3.846814e-06	1.366480e-05
TCGA-C8-A26Z-01A-11D-A16D-09	42	39	3	34	7.142857e-02	1	exome+100bp flanks	34834024	4	33	1.148303e-07	9.473496e-07
TCGA-C8-A273-01A-11D-A16D-09	18	17	1	12	5.555556e-02	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-C8-A274-01A-11D-A16D-09	192	181	11	133	5.729167e-02	1	exome+100bp flanks	34834024	44	127	1.263133e-06	3.645861e-06
TCGA-C8-A275-01A-21D-A16D-09	121	118	3	88	2.479339e-02	0	coding only	34834024	28	76	8.038118e-07	2.181775e-06
TCGA-C8-A278-01A-11D-A167-09	27	27	0	23	0	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-C8-A27A-01A-11D-A167-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-C8-A27B-01A-11D-A167-09	138	135	3	109	2.173913e-02	0	coding only	34834024	21	99	6.028589e-07	2.842049e-06
TCGA-C8-A3M7-01A-12D-A21Q-09	178	147	31	110	1.741573e-01	1	exome+100bp flanks	34834024	36	103	1.033472e-06	2.956879e-06
TCGA-C8-A3M8-01A-11D-A20S-09	59	47	12	40	2.033898e-01	1	exome+100bp flanks	34834024	6	37	1.722454e-07	1.062180e-06
TCGA-D8-A13Y-01A-11D-A10Y-09	66	64	2	47	3.030303e-02	1	exome+100bp flanks	34834024	16	47	4.593210e-07	1.349256e-06
TCGA-D8-A13Z-01A-11D-A10Y-09	62	60	2	52	3.225806e-02	1	exome+100bp flanks	34834024	6	48	1.722454e-07	1.377963e-06
TCGA-D8-A140-01A-11D-A10Y-09	91	86	5	67	5.494505e-02	1	exome+100bp flanks	34834024	18	63	5.167362e-07	1.808577e-06
TCGA-D8-A141-01A-11D-A10Y-09	17	16	1	13	5.882353e-02	1	exome+100bp flanks	34834024	3	12	8.612269e-08	3.444908e-07
TCGA-D8-A142-01A-11D-A10Y-09	65	59	6	41	9.230769e-02	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-D8-A143-01A-11D-A10Y-09	42	41	1	35	2.380952e-02	1	exome+100bp flanks	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-D8-A145-01A-11D-A10Y-09	27	26	1	19	3.703704e-02	1	exome+100bp flanks	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-D8-A146-01A-31D-A10Y-09	30	30	0	26	0	1	exome+100bp flanks	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-D8-A147-01A-11D-A10Y-09	120	115	5	90	4.166667e-02	1	exome+100bp flanks	34834024	23	85	6.602740e-07	2.440143e-06
TCGA-D8-A1J8-01A-11D-A13L-09	730	708	22	537	3.013699e-02	1	exome+100bp flanks	34834024	163	490	4.679333e-06	1.406671e-05
TCGA-D8-A1J9-01A-11D-A13L-09	168	158	10	116	5.952381e-02	1	exome+100bp flanks	34834024	40	105	1.148303e-06	3.014294e-06
TCGA-D8-A1JA-01A-11D-A13L-09	943	901	42	683	4.453871e-02	1	exome+100bp flanks	34834024	208	630	5.971173e-06	1.808577e-05
TCGA-D8-A1JB-01A-11D-A13L-09	26	22	4	18	1.538462e-01	1	exome+100bp flanks	34834024	4	17	1.148303e-07	4.880286e-07
TCGA-D8-A1JC-01A-11D-A13L-09	80	76	4	56	5.000000e-02	1	exome+100bp flanks	34834024	17	52	4.880286e-07	1.492793e-06
TCGA-D8-A1JD-01A-11D-A13L-09	78	74	4	62	5.128205e-02	1	exome+100bp flanks	34834024	10	57	2.870756e-07	1.636331e-06
TCGA-D8-A1JE-01A-11D-A13L-09	34	32	2	27	5.882353e-02	1	exome+100bp flanks	34834024	2	24	5.741513e-08	6.889816e-07
TCGA-D8-A1JF-01A-11D-A13L-09	43	41	2	35	4.651163e-02	1	exome+100bp flanks	34834024	6	31	1.722454e-07	8.899345e-07
TCGA-D8-A1JG-01B-11D-A13L-09	111	106	5	83	4.504505e-02	1	exome+100bp flanks	34834024	22	78	6.315664e-07	2.239190e-06
TCGA-D8-A1JH-01A-11D-A188-09	18	16	2	13	1.111111e-01	1	exome+100bp flanks	34834024	3	13	8.612269e-08	3.731983e-07
TCGA-D8-A1JI-01A-11D-A13L-09	35	33	2	22	5.714286e-02	1	exome+100bp flanks	34834024	11	20	3.157832e-07	5.741513e-07
TCGA-D8-A1JJ-01A-31D-A14K-09	72	65	7	44	9.722222e-02	1	exome+100bp flanks	34834024	19	38	5.454437e-07	1.090887e-06
TCGA-D8-A1JK-01A-11D-A13L-09	179	171	8	129	4.469274e-02	1	exome+100bp flanks	34834024	37	119	1.062180e-06	3.416200e-06
TCGA-D8-A1JL-01A-11D-A13L-09	107	101	6	73	5.607477e-02	1	exome+100bp flanks	34834024	22	68	6.315664e-07	1.952114e-06
TCGA-D8-A1JM-01A-11D-A13L-09	41	41	0	28	0	1	exome+100bp flanks	34834024	12	25	3.444908e-07	7.176891e-07
TCGA-D8-A1JN-01A-11D-A13L-09	172	157	15	106	8.720930e-02	1	exome+100bp flanks	34834024	48	99	1.377963e-06	2.842049e-06
TCGA-D8-A1JP-01A-11D-A13L-09	105	100	5	80	4.761905e-02	1	exome+100bp flanks	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-D8-A1JS-01A-11D-A13L-09	21	21	0	14	0	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-D8-A1JT-01A-31D-A13L-09	32	32	0	25	0	1	exome+100bp flanks	34834024	6	23	1.722454e-07	6.602740e-07
TCGA-D8-A1JU-01A-11D-A13L-09	12	12	0	7	0	1	exome+100bp flanks	34834024	5	7	1.435378e-07	2.009530e-07
TCGA-D8-A1X5-01A-11D-A14G-09	48	46	2	29	4.166667e-02	1	exome+100bp flanks	34834024	17	29	4.880286e-07	8.325194e-07
TCGA-D8-A1X6-01A-11D-A14K-09	40	38	2	34	5.000000e-02	1	exome+100bp flanks	34834024	4	29	1.148303e-07	8.325194e-07
TCGA-D8-A1X7-01A-11D-A14K-09	25	23	2	20	8.000000e-02	1	exome+100bp flanks	34834024	3	19	8.612269e-08	5.454437e-07
TCGA-D8-A1X8-01A-11D-A14K-09	27	24	3	16	1.111111e-01	1	exome+100bp flanks	34834024	8	16	2.296605e-07	4.593210e-07
TCGA-D8-A1X9-01A-12D-A159-09	88	83	5	65	5.681818e-02	1	exome+100bp flanks	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-D8-A1XA-01A-11D-A14G-09	26	26	0	22	0	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-D8-A1XB-01A-11D-A14G-09	29	28	1	22	3.448276e-02	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-D8-A1XC-01A-11D-A14G-09	29	28	1	23	3.448276e-02	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-D8-A1XF-01A-11D-A14G-09	40	38	2	28	5.000000e-02	1	exome+100bp flanks	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-D8-A1XG-01A-11D-A14G-09	24	24	0	17	0	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-D8-A1XJ-01A-11D-A14K-09	80	78	2	60	2.500000e-02	1	exome+100bp flanks	34834024	15	58	4.306135e-07	1.665039e-06
TCGA-D8-A1XK-01A-21D-A14K-09	940	899	41	692	4.361702e-02	1	exome+100bp flanks	34834024	194	649	5.569268e-06	1.863121e-05
TCGA-D8-A1XL-01A-11D-A14K-09	91	88	3	79	3.296703e-02	1	exome+100bp flanks	34834024	8	72	2.296605e-07	2.066945e-06
TCGA-D8-A1XM-01A-21D-A14K-09	58	52	6	38	1.034483e-01	1	exome+100bp flanks	34834024	13	37	3.731983e-07	1.062180e-06
TCGA-D8-A1XO-01A-11D-A14K-09	18	17	1	11	5.555556e-02	1	exome+100bp flanks	34834024	6	10	1.722454e-07	2.870756e-07
TCGA-D8-A1XQ-01A-11D-A14K-09	724	700	24	543	3.314917e-02	1	exome+100bp flanks	34834024	147	508	4.220012e-06	1.458344e-05
TCGA-D8-A1XR-01A-11D-A14K-09	24	23	1	20	4.166667e-02	1	exome+100bp flanks	34834024	3	19	8.612269e-08	5.454437e-07
TCGA-D8-A1XS-01A-11D-A14K-09	20	19	1	10	5.000000e-02	1	exome+100bp flanks	34834024	8	10	2.296605e-07	2.870756e-07
TCGA-D8-A1XT-01A-11D-A14K-09	45	42	3	34	6.666667e-02	1	exome+100bp flanks	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-D8-A1XU-01A-11D-A14K-09	26	26	0	15	0	1	exome+100bp flanks	34834024	8	12	2.296605e-07	3.444908e-07
TCGA-D8-A1XV-01A-11D-A14K-09	29	27	2	20	6.896552e-02	1	exome+100bp flanks	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-D8-A1XW-01A-11D-A14K-09	86	80	6	63	6.976744e-02	1	exome+100bp flanks	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-D8-A1XY-01A-11D-A14K-09	41	38	3	26	7.317073e-02	1	exome+100bp flanks	34834024	12	23	3.444908e-07	6.602740e-07
TCGA-D8-A1XZ-01A-11D-A14K-09	60	60	0	49	0	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-D8-A1Y0-01A-11D-A14K-09	66	60	6	45	9.090909e-02	1	exome+100bp flanks	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-D8-A1Y1-01A-21D-A14K-09	194	191	3	145	1.546392e-02	0	coding only	34834024	44	128	1.263133e-06	3.674568e-06
TCGA-D8-A1Y2-01A-11D-A159-09	23	21	2	17	8.695652e-02	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-D8-A1Y3-01A-11D-A159-09	53	51	2	39	3.773585e-02	1	exome+100bp flanks	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-D8-A27E-01A-11D-A16D-09	8	8	0	8	0	1	exome+100bp flanks	34834024	0	7	0	2.009530e-07
TCGA-D8-A27F-01A-11D-A16D-09	56	52	4	40	7.142857e-02	1	exome+100bp flanks	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-D8-A27G-01A-11D-A16D-09	972	905	67	709	6.893004e-02	1	exome+100bp flanks	34834024	180	663	5.167362e-06	1.903312e-05
TCGA-D8-A27H-01A-11D-A16D-09	114	105	9	86	7.894737e-02	1	exome+100bp flanks	34834024	19	76	5.454437e-07	2.181775e-06
TCGA-D8-A27I-01A-11D-A16D-09	32	32	0	26	0	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-D8-A27K-01A-11D-A16D-09	22	22	0	18	0	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-D8-A27L-01A-11D-A16D-09	36	33	3	26	8.333333e-02	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-D8-A27M-01A-11D-A16D-09	61	55	6	44	9.836066e-02	1	exome+100bp flanks	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-D8-A27N-01A-11D-A16D-09	46	44	2	37	4.347826e-02	1	exome+100bp flanks	34834024	7	34	2.009530e-07	9.760572e-07
TCGA-D8-A27P-01A-11D-A16D-09	24	23	1	16	4.166667e-02	1	exome+100bp flanks	34834024	7	15	2.009530e-07	4.306135e-07
TCGA-D8-A27R-01A-11D-A16D-09	26	25	1	21	3.846154e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-D8-A27T-01A-11D-A16D-09	22	22	0	18	0	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-D8-A27V-01A-12D-A17D-09	229	209	20	158	8.733624e-02	1	exome+100bp flanks	34834024	49	147	1.406671e-06	4.220012e-06
TCGA-D8-A27W-01A-11D-A16D-09	20	19	1	17	5.000000e-02	1	exome+100bp flanks	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-D8-A3Z5-01A-41D-A243-09	30	23	7	13	2.333333e-01	1	exome+100bp flanks	34834024	8	11	2.296605e-07	3.157832e-07
TCGA-D8-A3Z6-01A-11D-A23C-09	34	31	3	23	8.823529e-02	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-D8-A4Z1-01A-21D-A25Q-09	16	14	2	8	1.250000e-01	1	exome+100bp flanks	34834024	6	8	1.722454e-07	2.296605e-07
TCGA-E2-A105-01A-11D-A10M-09	58	56	2	43	3.448276e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-E2-A107-01A-11D-A10M-09	31	29	2	22	6.451613e-02	1	exome+100bp flanks	34834024	6	19	1.722454e-07	5.454437e-07
TCGA-E2-A108-01A-13D-A10M-09	53	52	1	39	1.886792e-02	1	exome+100bp flanks	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-E2-A109-01A-11D-A10M-09	81	76	5	64	6.172840e-02	1	exome+100bp flanks	34834024	11	62	3.157832e-07	1.779869e-06
TCGA-E2-A10A-01A-21D-A10Y-09	20	20	0	15	0	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-E2-A10B-01A-11D-A10M-09	38	36	2	28	5.263158e-02	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-E2-A10C-01A-21D-A10M-09	355	343	12	254	3.380282e-02	1	exome+100bp flanks	34834024	83	234	2.382728e-06	6.717570e-06
TCGA-E2-A10E-01A-21D-A10M-09	25	23	2	20	8.000000e-02	1	exome+100bp flanks	34834024	3	20	8.612269e-08	5.741513e-07
TCGA-E2-A10F-01A-11D-A10M-09	26	26	0	20	0	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-E2-A14N-01A-31D-A135-09	57	54	3	41	5.263158e-02	1	exome+100bp flanks	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-E2-A14O-01A-31D-A10Y-09	35	34	1	30	2.857143e-02	1	exome+100bp flanks	34834024	4	26	1.148303e-07	7.463967e-07
TCGA-E2-A14P-01A-31D-A12B-09	82	75	7	52	8.536585e-02	1	exome+100bp flanks	34834024	22	48	6.315664e-07	1.377963e-06
TCGA-E2-A14Q-01A-11D-A12B-09	23	21	2	16	8.695652e-02	1	exome+100bp flanks	34834024	5	15	1.435378e-07	4.306135e-07
TCGA-E2-A14R-01A-11D-A10Y-09	105	102	3	88	2.857143e-02	0	coding only	34834024	13	75	3.731983e-07	2.153067e-06
TCGA-E2-A14S-01A-11D-A12B-09	35	31	4	23	1.142857e-01	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-E2-A14T-01A-11D-A10Y-09	32	32	0	26	0	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-E2-A14U-01A-11D-A228-09	20	15	5	11	2.500000e-01	1	exome+100bp flanks	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-E2-A14V-01A-11D-A12B-09	75	68	7	55	9.333333e-02	1	exome+100bp flanks	34834024	13	51	3.731983e-07	1.464086e-06
TCGA-E2-A14W-01A-11D-A12B-09	83	80	3	65	3.614458e-02	1	exome+100bp flanks	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-E2-A14X-01A-11D-A10Y-09	24	23	1	15	4.166667e-02	1	exome+100bp flanks	34834024	8	13	2.296605e-07	3.731983e-07
TCGA-E2-A14Y-01A-21D-A12B-09	35	33	2	25	5.714286e-02	1	exome+100bp flanks	34834024	8	23	2.296605e-07	6.602740e-07
TCGA-E2-A14Z-01A-11D-A10Y-09	62	58	4	41	6.451613e-02	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-E2-A150-01A-11D-A12B-09	46	44	2	35	4.347826e-02	1	exome+100bp flanks	34834024	8	33	2.296605e-07	9.473496e-07
TCGA-E2-A152-01A-11D-A12B-09	121	116	5	91	4.132231e-02	1	exome+100bp flanks	34834024	23	79	6.602740e-07	2.267898e-06
TCGA-E2-A153-01A-12D-A12B-09	23	23	0	18	0	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-E2-A154-01A-11D-A10Y-09	41	39	2	30	4.878049e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-E2-A155-01A-11D-A12B-09	55	53	2	39	3.636364e-02	1	exome+100bp flanks	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-E2-A156-01A-11D-A12B-09	17	15	2	15	1.176471e-01	1	exome+100bp flanks	34834024	0	14	0	4.019059e-07
TCGA-E2-A158-01A-11D-A12B-09	87	81	6	72	6.896552e-02	1	exome+100bp flanks	34834024	9	69	2.583681e-07	1.980822e-06
TCGA-E2-A159-01A-11D-A10Y-09	148	141	7	110	4.729730e-02	1	exome+100bp flanks	34834024	29	103	8.325194e-07	2.956879e-06
TCGA-E2-A15A-01A-11D-A12B-09	40	38	2	36	5.000000e-02	1	exome+100bp flanks	34834024	2	34	5.741513e-08	9.760572e-07
TCGA-E2-A15C-01A-31D-A12B-09	29	28	1	21	3.448276e-02	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-E2-A15D-01A-11D-A10Y-09	28	28	0	24	0	1	exome+100bp flanks	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-E2-A15E-01A-11D-A12B-09	28	27	1	22	3.571429e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-E2-A15F-01A-11D-A10Y-09	21	21	0	19	0	1	exome+100bp flanks	34834024	2	19	5.741513e-08	5.454437e-07
TCGA-E2-A15G-01A-11D-A12B-09	59	57	2	39	3.389831e-02	1	exome+100bp flanks	34834024	17	38	4.880286e-07	1.090887e-06
TCGA-E2-A15H-01A-11D-A12B-09	32	28	4	25	1.250000e-01	1	exome+100bp flanks	34834024	3	25	8.612269e-08	7.176891e-07
TCGA-E2-A15I-01A-21D-A135-09	127	102	25	73	1.968504e-01	1	exome+100bp flanks	34834024	29	69	8.325194e-07	1.980822e-06
TCGA-E2-A15J-01A-11D-A12Q-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-E2-A15K-01A-11D-A12Q-09	40	40	0	32	0	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-E2-A15L-01A-11D-A12B-09	32	30	2	28	6.250000e-02	1	exome+100bp flanks	34834024	2	26	5.741513e-08	7.463967e-07
TCGA-E2-A15M-01A-11D-A12B-09	66	65	1	48	1.515152e-02	1	exome+100bp flanks	34834024	17	47	4.880286e-07	1.349256e-06
TCGA-E2-A15O-01A-11D-A10Y-09	35	33	2	25	5.714286e-02	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-E2-A15P-01A-11D-A10Y-09	45	43	2	38	4.444444e-02	1	exome+100bp flanks	34834024	5	37	1.435378e-07	1.062180e-06
TCGA-E2-A15R-01A-11D-A10Y-09	42	40	2	30	4.761905e-02	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-E2-A15S-01A-11D-A10Y-09	45	43	2	32	4.444444e-02	1	exome+100bp flanks	34834024	11	30	3.157832e-07	8.612269e-07
TCGA-E2-A15T-01A-11D-A10Y-09	43	43	0	32	0	1	exome+100bp flanks	34834024	10	25	2.870756e-07	7.176891e-07
TCGA-E2-A1AZ-01A-11D-A12Q-09	53	51	2	36	3.773585e-02	1	exome+100bp flanks	34834024	15	34	4.306135e-07	9.760572e-07
TCGA-E2-A1B0-01A-11D-A12Q-09	40	39	1	27	2.500000e-02	1	exome+100bp flanks	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-E2-A1B1-01A-21D-A12Q-09	14	13	1	9	7.142857e-02	1	exome+100bp flanks	34834024	4	9	1.148303e-07	2.583681e-07
TCGA-E2-A1B4-01A-11D-A12Q-09	34	30	4	27	1.176471e-01	1	exome+100bp flanks	34834024	3	26	8.612269e-08	7.463967e-07
TCGA-E2-A1B5-01A-21D-A12Q-09	15	15	0	12	0	1	exome+100bp flanks	34834024	3	12	8.612269e-08	3.444908e-07
TCGA-E2-A1B6-01A-31D-A12Q-09	11	10	1	8	9.090909e-02	1	exome+100bp flanks	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-E2-A1BC-01A-11D-A14G-09	34	29	5	22	1.470588e-01	1	exome+100bp flanks	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-E2-A1BD-01A-11D-A12Q-09	29	29	0	24	0	1	exome+100bp flanks	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-E2-A1IE-01A-11D-A188-09	20	17	3	15	1.500000e-01	1	exome+100bp flanks	34834024	2	15	5.741513e-08	4.306135e-07
TCGA-E2-A1IF-01A-11D-A142-09	15	15	0	14	0	1	exome+100bp flanks	34834024	1	12	2.870756e-08	3.444908e-07
TCGA-E2-A1IG-01A-11D-A142-09	41	39	2	30	4.878049e-02	1	exome+100bp flanks	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-E2-A1IH-01A-11D-A188-09	62	61	1	51	1.612903e-02	1	exome+100bp flanks	34834024	9	49	2.583681e-07	1.406671e-06
TCGA-E2-A1II-01A-11D-A142-09	27	25	2	20	7.407407e-02	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-E2-A1IJ-01A-11D-A142-09	18	17	1	14	5.555556e-02	1	exome+100bp flanks	34834024	2	13	5.741513e-08	3.731983e-07
TCGA-E2-A1IK-01A-11D-A17G-09	17	13	4	10	2.352941e-01	1	exome+100bp flanks	34834024	3	10	8.612269e-08	2.870756e-07
TCGA-E2-A1IL-01A-11D-A14G-09	21	20	1	16	4.761905e-02	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-E2-A1IN-01A-11D-A13L-09	193	186	7	134	3.626943e-02	1	exome+100bp flanks	34834024	49	121	1.406671e-06	3.473615e-06
TCGA-E2-A1IO-01A-11D-A142-09	14	13	1	12	7.142857e-02	1	exome+100bp flanks	34834024	1	12	2.870756e-08	3.444908e-07
TCGA-E2-A1IU-01A-11D-A14G-09	24	20	4	15	1.666667e-01	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-E2-A1L6-01A-11D-A13L-09	19	17	2	13	1.052632e-01	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-E2-A1L7-01A-11D-A142-09	64	61	3	53	4.687500e-02	1	exome+100bp flanks	34834024	8	49	2.296605e-07	1.406671e-06
TCGA-E2-A1L8-01A-11D-A13L-09	30	27	3	21	1.000000e-01	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-E2-A1L9-01A-11D-A13L-09	23	22	1	18	4.347826e-02	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-E2-A1LA-01A-11D-A142-09	83	80	3	59	3.614458e-02	1	exome+100bp flanks	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-E2-A1LB-01A-11D-A142-09	39	37	2	30	5.128205e-02	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-E2-A1LE-01A-12D-A19Y-09	80	66	14	52	1.750000e-01	1	exome+100bp flanks	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-E2-A1LG-01A-21D-A14K-09	127	117	10	86	7.874016e-02	1	exome+100bp flanks	34834024	30	80	8.612269e-07	2.296605e-06
TCGA-E2-A1LH-01A-11D-A14G-09	149	145	4	117	2.684564e-02	0	coding only	34834024	27	109	7.751042e-07	3.129125e-06
TCGA-E2-A1LI-01A-12D-A159-09	14	12	2	9	1.428571e-01	1	exome+100bp flanks	34834024	2	7	5.741513e-08	2.009530e-07
TCGA-E2-A1LK-01A-21D-A14G-09	44	40	4	26	9.090909e-02	1	exome+100bp flanks	34834024	13	23	3.731983e-07	6.602740e-07
TCGA-E2-A1LL-01A-11D-A142-09	25	22	3	17	1.200000e-01	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-E2-A1LS-01A-12D-A159-09	73	69	4	55	5.479452e-02	1	exome+100bp flanks	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-E2-A2P5-01A-11D-A19Y-09	105	87	18	66	1.714286e-01	1	exome+100bp flanks	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-E2-A2P6-01A-11D-A19Y-09	165	141	24	96	1.454545e-01	1	exome+100bp flanks	34834024	41	92	1.177010e-06	2.641096e-06
TCGA-E2-A3DX-01A-21D-A20S-09	21	13	8	8	3.809524e-01	1	exome+100bp flanks	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-E2-A56Z-01A-12D-A29N-09	53	47	6	40	1.132075e-01	1	exome+100bp flanks	34834024	5	37	1.435378e-07	1.062180e-06
TCGA-E2-A570-01A-11D-A29N-09	33	27	6	21	1.818182e-01	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-E2-A573-01A-11D-A29N-09	61	50	11	39	1.803279e-01	1	exome+100bp flanks	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-E2-A574-01A-11D-A29N-09	121	101	20	71	1.652893e-01	1	exome+100bp flanks	34834024	28	66	8.038118e-07	1.894699e-06
TCGA-E9-A1N3-01A-12D-A159-09	27	25	2	22	7.407407e-02	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-E9-A1N4-01A-11D-A14K-09	27	21	6	15	2.222222e-01	1	exome+100bp flanks	34834024	5	15	1.435378e-07	4.306135e-07
TCGA-E9-A1N5-01A-11D-A14G-09	29	27	2	21	6.896552e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-E9-A1N8-01A-11D-A142-09	28	25	3	22	1.071429e-01	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-E9-A1N9-01A-11D-A14G-09	49	47	2	39	4.081633e-02	1	exome+100bp flanks	34834024	7	37	2.009530e-07	1.062180e-06
TCGA-E9-A1NA-01A-11D-A142-09	92	88	4	71	4.347826e-02	1	exome+100bp flanks	34834024	17	68	4.880286e-07	1.952114e-06
TCGA-E9-A1NC-01A-12W-A16L-09	111	108	3	95	2.702703e-02	0	coding only	34834024	13	85	3.731983e-07	2.440143e-06
TCGA-E9-A1ND-01A-11D-A142-09	67	64	3	51	4.477612e-02	1	exome+100bp flanks	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-E9-A1NE-01A-21D-A14K-09	34	32	2	29	5.882353e-02	1	exome+100bp flanks	34834024	3	26	8.612269e-08	7.463967e-07
TCGA-E9-A1NF-01A-11D-A14G-09	44	43	1	35	2.272727e-02	1	exome+100bp flanks	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-E9-A1NG-01A-21D-A14K-09	19	16	3	13	1.578947e-01	1	exome+100bp flanks	34834024	3	11	8.612269e-08	3.157832e-07
TCGA-E9-A1NH-01A-11D-A14G-09	27	24	3	17	1.111111e-01	1	exome+100bp flanks	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-E9-A1NI-01A-11W-A16H-09	89	85	4	81	4.494382e-02	1	exome+100bp flanks	34834024	4	74	1.148303e-07	2.124360e-06
TCGA-E9-A1QZ-01A-21D-A167-09	10	10	0	9	0	1	exome+100bp flanks	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-E9-A1R0-01A-22D-A16D-09	25	23	2	18	8.000000e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-E9-A1R2-01A-11D-A14G-09	54	52	2	43	3.703704e-02	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-E9-A1R3-01A-31D-A14K-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-E9-A1R4-01A-21D-A14G-09	97	94	3	74	3.092784e-02	1	exome+100bp flanks	34834024	20	71	5.741513e-07	2.038237e-06
TCGA-E9-A1R5-01A-11D-A14K-09	34	34	0	25	0	1	exome+100bp flanks	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-E9-A1R6-01A-11D-A14G-09	26	26	0	19	0	1	exome+100bp flanks	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-E9-A1R7-01A-11D-A14K-09	53	49	4	38	7.547170e-02	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-E9-A1RA-01A-11D-A14G-09	21	20	1	12	4.761905e-02	1	exome+100bp flanks	34834024	7	12	2.009530e-07	3.444908e-07
TCGA-E9-A1RB-01A-11D-A17G-09	31	27	4	18	1.290323e-01	1	exome+100bp flanks	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-E9-A1RC-01A-11D-A159-09	48	47	1	35	2.083333e-02	1	exome+100bp flanks	34834024	12	33	3.444908e-07	9.473496e-07
TCGA-E9-A1RD-01A-11D-A159-09	25	24	1	19	4.000000e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-E9-A1RE-01A-11D-A159-09	47	42	5	34	1.063830e-01	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-E9-A1RF-01A-11D-A159-09	130	122	8	100	6.153846e-02	1	exome+100bp flanks	34834024	21	93	6.028589e-07	2.669804e-06
TCGA-E9-A1RG-01A-11D-A14G-09	38	37	1	30	2.631579e-02	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-E9-A1RH-01A-21D-A167-09	81	77	4	61	4.938272e-02	1	exome+100bp flanks	34834024	16	56	4.593210e-07	1.607624e-06
TCGA-E9-A1RI-01A-11D-A167-09	16	16	0	8	0	1	exome+100bp flanks	34834024	7	7	2.009530e-07	2.009530e-07
TCGA-E9-A226-01A-21D-A159-09	31	31	0	21	0	1	exome+100bp flanks	34834024	10	19	2.870756e-07	5.454437e-07
TCGA-E9-A227-01A-11D-A159-09	14	12	2	10	1.428571e-01	1	exome+100bp flanks	34834024	2	10	5.741513e-08	2.870756e-07
TCGA-E9-A228-01A-31D-A159-09	42	40	2	28	4.761905e-02	1	exome+100bp flanks	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-E9-A229-01A-31D-A17G-09	21	21	0	13	0	1	exome+100bp flanks	34834024	6	12	1.722454e-07	3.444908e-07
TCGA-E9-A22A-01A-11D-A159-09	29	29	0	23	0	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-E9-A22B-01A-11D-A159-09	52	50	2	38	3.846154e-02	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-E9-A22D-01A-11D-A159-09	19	18	1	12	5.263158e-02	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-E9-A22E-01A-11D-A159-09	85	79	6	64	7.058824e-02	1	exome+100bp flanks	34834024	14	56	4.019059e-07	1.607624e-06
TCGA-E9-A22G-01A-11D-A159-09	101	95	6	72	5.940594e-02	1	exome+100bp flanks	34834024	19	64	5.454437e-07	1.837284e-06
TCGA-E9-A22H-01A-11D-A159-09	19	18	1	18	5.263158e-02	1	exome+100bp flanks	34834024	0	15	0	4.306135e-07
TCGA-E9-A243-01A-21D-A167-09	61	57	4	46	6.557377e-02	1	exome+100bp flanks	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-E9-A244-01A-11D-A167-09	87	82	5	60	5.747126e-02	1	exome+100bp flanks	34834024	21	54	6.028589e-07	1.550208e-06
TCGA-E9-A245-01A-22D-A16D-09	18	17	1	12	5.555556e-02	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-E9-A247-01A-11D-A167-09	33	31	2	26	6.060606e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-E9-A248-01A-11D-A167-09	16	16	0	14	0	1	exome+100bp flanks	34834024	2	13	5.741513e-08	3.731983e-07
TCGA-E9-A249-01A-11D-A167-09	16	15	1	10	6.250000e-02	1	exome+100bp flanks	34834024	5	10	1.435378e-07	2.870756e-07
TCGA-E9-A24A-01A-11D-A167-09	18	18	0	18	0	1	exome+100bp flanks	34834024	0	17	0	4.880286e-07
TCGA-E9-A295-01A-11D-A16D-09	68	67	1	54	1.470588e-02	1	exome+100bp flanks	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-E9-A2JS-01A-11D-A17W-09	76	64	12	46	1.578947e-01	1	exome+100bp flanks	34834024	18	44	5.167362e-07	1.263133e-06
TCGA-E9-A2JT-01A-22D-A18P-09	7	6	1	4	1.428571e-01	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-E9-A3HO-01A-11D-A20S-09	74	64	10	56	1.351351e-01	1	exome+100bp flanks	34834024	6	51	1.722454e-07	1.464086e-06
TCGA-E9-A3Q9-01A-11D-A21Q-09	72	41	31	34	4.305556e-01	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-E9-A3QA-01A-61D-A228-09	68	61	7	47	1.029412e-01	1	exome+100bp flanks	34834024	14	43	4.019059e-07	1.234425e-06
TCGA-E9-A3X8-01A-31D-A22X-09	20	18	2	13	1.000000e-01	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-E9-A54X-01A-11D-A25Q-09	38	29	9	23	2.368421e-01	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-E9-A54Y-01A-11D-A25Q-09	51	41	10	30	1.960784e-01	1	exome+100bp flanks	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-E9-A5FK-01A-11D-A27P-09	18	16	2	13	1.111111e-01	1	exome+100bp flanks	34834024	3	11	8.612269e-08	3.157832e-07
TCGA-E9-A5FL-01A-11D-A27P-09	97	79	18	67	1.855670e-01	1	exome+100bp flanks	34834024	12	64	3.444908e-07	1.837284e-06
TCGA-E9-A5UO-01A-11D-A28B-09	38	33	5	27	1.315789e-01	1	exome+100bp flanks	34834024	5	22	1.435378e-07	6.315664e-07
TCGA-E9-A5UP-01A-11D-A28B-09	39	29	10	22	2.564103e-01	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-EW-A1IW-01A-11D-A13L-09	82	78	4	55	4.878049e-02	1	exome+100bp flanks	34834024	23	50	6.602740e-07	1.435378e-06
TCGA-EW-A1IX-01A-12D-A142-09	21	18	3	16	1.428571e-01	1	exome+100bp flanks	34834024	1	13	2.870756e-08	3.731983e-07
TCGA-EW-A1IY-01A-11D-A188-09	26	25	1	18	3.846154e-02	1	exome+100bp flanks	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-EW-A1IZ-01A-11D-A188-09	321	308	13	226	4.049844e-02	1	exome+100bp flanks	34834024	79	203	2.267898e-06	5.827636e-06
TCGA-EW-A1J1-01A-11D-A188-09	21	20	1	12	4.761905e-02	1	exome+100bp flanks	34834024	7	11	2.009530e-07	3.157832e-07
TCGA-EW-A1J2-01A-21D-A13L-09	29	28	1	22	3.448276e-02	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-EW-A1J3-01A-11D-A13L-09	27	26	1	21	3.703704e-02	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-EW-A1J5-01A-11D-A13L-09	413	398	15	294	3.631961e-02	1	exome+100bp flanks	34834024	97	275	2.784634e-06	7.894580e-06
TCGA-EW-A1J6-01A-11D-A188-09	42	41	1	28	2.380952e-02	1	exome+100bp flanks	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-EW-A1OV-01A-11D-A142-09	92	88	4	67	4.347826e-02	1	exome+100bp flanks	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-EW-A1OX-01A-11D-A142-09	24	21	3	14	1.250000e-01	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-EW-A1OY-01A-11D-A142-09	62	60	2	49	3.225806e-02	1	exome+100bp flanks	34834024	10	43	2.870756e-07	1.234425e-06
TCGA-EW-A1OZ-01A-11D-A142-09	51	47	4	38	7.843137e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-EW-A1P0-01A-11D-A142-09	24	23	1	18	4.166667e-02	1	exome+100bp flanks	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-EW-A1P1-01A-31D-A14G-09	3	2	1	1	3.333333e-01	1	exome+100bp flanks	34834024	1	0	2.870756e-08	0
TCGA-EW-A1P3-01A-11D-A142-09	13	13	0	11	0	1	exome+100bp flanks	34834024	2	10	5.741513e-08	2.870756e-07
TCGA-EW-A1P4-01A-21D-A142-09	59	56	3	43	5.084746e-02	1	exome+100bp flanks	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-EW-A1P5-01A-11D-A142-09	18	17	1	13	5.555556e-02	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-EW-A1P6-01A-11D-A142-09	22	19	3	17	1.363636e-01	1	exome+100bp flanks	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-EW-A1P7-01A-21D-A142-09	8	7	1	5	1.250000e-01	1	exome+100bp flanks	34834024	2	5	5.741513e-08	1.435378e-07
TCGA-EW-A1P8-01A-11D-A142-09	39	37	2	27	5.128205e-02	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-EW-A1PA-01A-11D-A142-09	35	33	2	24	5.714286e-02	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-EW-A1PB-01A-11D-A142-09	138	130	8	100	5.797101e-02	1	exome+100bp flanks	34834024	29	96	8.325194e-07	2.755926e-06
TCGA-EW-A1PC-01B-11D-A21Q-09	149	118	31	89	2.080537e-01	1	exome+100bp flanks	34834024	25	75	7.176891e-07	2.153067e-06
TCGA-EW-A1PD-01A-11D-A142-09	70	68	2	56	2.857143e-02	1	exome+100bp flanks	34834024	12	48	3.444908e-07	1.377963e-06
TCGA-EW-A1PE-01A-11D-A142-09	35	30	5	24	1.428571e-01	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-EW-A1PG-01A-11D-A142-09	6	6	0	5	0	1	exome+100bp flanks	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-EW-A1PH-01A-11D-A14K-09	43	40	3	33	6.976744e-02	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-EW-A2FR-01A-11D-A21Q-09	55	46	9	40	1.636364e-01	1	exome+100bp flanks	34834024	6	38	1.722454e-07	1.090887e-06
TCGA-EW-A2FS-01A-11D-A17D-09	28	28	0	18	0	1	exome+100bp flanks	34834024	10	15	2.870756e-07	4.306135e-07
TCGA-EW-A2FV-01A-11D-A17D-09	22	19	3	16	1.363636e-01	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-EW-A2FW-01A-11D-A17D-09	20	19	1	17	5.000000e-02	1	exome+100bp flanks	34834024	2	17	5.741513e-08	4.880286e-07
TCGA-EW-A3E8-01B-11D-A243-09	101	85	16	66	1.584158e-01	1	exome+100bp flanks	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-EW-A3U0-01A-11D-A228-09	146	125	21	95	1.438356e-01	1	exome+100bp flanks	34834024	27	87	7.751042e-07	2.497558e-06
TCGA-EW-A423-01A-11D-A243-09	70	59	11	38	1.571429e-01	1	exome+100bp flanks	34834024	18	36	5.167362e-07	1.033472e-06
TCGA-GI-A2C8-01A-11D-A16D-09	108	105	3	81	2.777778e-02	0	coding only	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-GI-A2C9-01A-11D-A21Q-09	160	128	32	99	2.000000e-01	1	exome+100bp flanks	34834024	28	91	8.038118e-07	2.612388e-06
TCGA-GM-A2D9-01A-11D-A18P-09	395	377	18	278	4.556962e-02	1	exome+100bp flanks	34834024	96	254	2.755926e-06	7.291721e-06
TCGA-GM-A2DA-01A-11D-A18P-09	33	30	3	20	9.090909e-02	1	exome+100bp flanks	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-GM-A2DB-01A-31D-A19Y-09	96	91	5	81	5.208333e-02	1	exome+100bp flanks	34834024	10	74	2.870756e-07	2.124360e-06
TCGA-GM-A2DC-01A-11D-A18P-09	20	19	1	14	5.000000e-02	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-GM-A2DD-01A-11D-A17W-09	47	43	4	35	8.510638e-02	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-GM-A2DF-01A-11D-A17W-09	34	30	4	22	1.176471e-01	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-GM-A2DH-01A-11D-A17W-09	119	113	6	92	5.042017e-02	1	exome+100bp flanks	34834024	21	78	6.028589e-07	2.239190e-06
TCGA-GM-A2DI-01A-31D-A18P-09	26	26	0	20	0	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-GM-A2DK-01A-21D-A17W-09	24	22	2	14	8.333333e-02	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-GM-A2DL-01A-11D-A18P-09	43	42	1	37	2.325581e-02	1	exome+100bp flanks	34834024	5	34	1.435378e-07	9.760572e-07
TCGA-GM-A2DM-01A-11D-A17W-09	20	19	1	18	5.000000e-02	1	exome+100bp flanks	34834024	1	17	2.870756e-08	4.880286e-07
TCGA-GM-A2DN-01A-11D-A17W-09	21	20	1	17	4.761905e-02	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-GM-A2DO-01A-11D-A19Y-09	93	93	0	65	0	1	exome+100bp flanks	34834024	25	62	7.176891e-07	1.779869e-06
TCGA-GM-A3NW-01A-21D-A228-09	92	80	12	59	1.304348e-01	1	exome+100bp flanks	34834024	17	55	4.880286e-07	1.578916e-06
TCGA-GM-A3NY-01A-11D-A21Q-09	124	61	63	48	5.080645e-01	2	all capture (no interval list)	65505363	11	41	1.679252e-07	6.259030e-07
TCGA-GM-A3XG-01A-31D-A243-09	8	6	2	5	2.500000e-01	1	exome+100bp flanks	34834024	0	4	0	1.148303e-07
TCGA-GM-A3XL-01A-11D-A22X-09	95	80	15	66	1.578947e-01	1	exome+100bp flanks	34834024	13	57	3.731983e-07	1.636331e-06
TCGA-GM-A3XN-01A-12D-A22X-09	26	19	7	14	2.692308e-01	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-GM-A4E0-01A-12D-A25Q-09	28	23	5	16	1.785714e-01	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-GM-A5PV-01A-11D-A28B-09	26	21	5	16	1.923077e-01	1	exome+100bp flanks	34834024	5	15	1.435378e-07	4.306135e-07
TCGA-GM-A5PX-01A-12D-A28B-09	33	29	4	21	1.212121e-01	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-HN-A2NL-01A-11D-A18P-09	71	68	3	55	4.225352e-02	1	exome+100bp flanks	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-HN-A2OB-01A-21D-A27P-09	12	10	2	9	1.666667e-01	1	exome+100bp flanks	34834024	1	9	2.870756e-08	2.583681e-07
TCGA-JL-A3YW-01A-12D-A23C-09	98	82	16	66	1.632653e-01	1	exome+100bp flanks	34834024	14	59	4.019059e-07	1.693746e-06
TCGA-JL-A3YX-01A-11D-A22X-09	41	33	8	27	1.951220e-01	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-LL-A440-01A-11D-A243-09	8	6	2	3	2.500000e-01	1	exome+100bp flanks	34834024	3	3	8.612269e-08	8.612269e-08
TCGA-LL-A441-01A-11D-A243-09	79	65	14	44	1.772152e-01	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-LL-A50Y-01A-11D-A25Q-09	43	37	6	25	1.395349e-01	1	exome+100bp flanks	34834024	12	23	3.444908e-07	6.602740e-07
TCGA-LL-A5YL-01A-12D-A29N-09	78	69	9	51	1.153846e-01	1	exome+100bp flanks	34834024	17	45	4.880286e-07	1.291840e-06
TCGA-LL-A5YM-01A-11D-A28B-09	30	26	4	19	1.333333e-01	1	exome+100bp flanks	34834024	7	15	2.009530e-07	4.306135e-07
TCGA-LL-A5YN-01A-11D-A28B-09	28	25	3	23	1.071429e-01	1	exome+100bp flanks	34834024	2	20	5.741513e-08	5.741513e-07
TCGA-LL-A5YO-01A-21D-A28B-09	39	35	4	28	1.025641e-01	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-LL-A5YP-01A-21D-A28B-09	94	75	19	60	2.021277e-01	1	exome+100bp flanks	34834024	14	56	4.019059e-07	1.607624e-06
TCGA-LQ-A4E4-01A-11D-A25Q-09	97	81	16	62	1.649485e-01	1	exome+100bp flanks	34834024	19	50	5.454437e-07	1.435378e-06
TCGA-MS-A51U-01A-31D-A25Q-09	19	16	3	12	1.578947e-01	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-OK-A5Q2-01A-11D-A27P-09	32	27	5	22	1.562500e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-OL-A5D6-01A-21D-A27P-09	42	38	4	30	9.523810e-02	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-OL-A5D7-01A-11D-A27P-09	59	50	9	38	1.525424e-01	1	exome+100bp flanks	34834024	11	34	3.157832e-07	9.760572e-07
TCGA-OL-A5D8-01A-11D-A27P-09	35	32	3	24	8.571429e-02	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-OL-A5DA-01A-11D-A27P-09	65	59	6	42	9.230769e-02	1	exome+100bp flanks	34834024	16	38	4.593210e-07	1.090887e-06
TCGA-OL-A5RU-01A-11D-A28B-09	29	25	4	22	1.379310e-01	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-OL-A5RV-01A-12D-A28B-09	16	13	3	11	1.875000e-01	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-OL-A5RW-01A-11D-A28B-09	172	147	25	118	1.453488e-01	1	exome+100bp flanks	34834024	27	112	7.751042e-07	3.215247e-06
TCGA-OL-A5RX-01A-11D-A28B-09	30	26	4	20	1.333333e-01	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-OL-A5RY-01A-21D-A28B-09	13	10	3	8	2.307692e-01	1	exome+100bp flanks	34834024	2	7	5.741513e-08	2.009530e-07
TCGA-OL-A5RZ-01A-11D-A28B-09	115	106	9	77	7.826087e-02	1	exome+100bp flanks	34834024	26	75	7.463967e-07	2.153067e-06
TCGA-OL-A5S0-01A-11D-A28B-09	43	37	6	31	1.395349e-01	1	exome+100bp flanks	34834024	5	28	1.435378e-07	8.038118e-07
TCGA-OL-A66H-01A-11D-A29N-09	26	23	3	17	1.153846e-01	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-OL-A66I-01A-21D-A29N-09	39	34	5	24	1.282051e-01	1	exome+100bp flanks	34834024	10	24	2.870756e-07	6.889816e-07
TCGA-OL-A66J-01A-11D-A29N-09	62	52	10	43	1.612903e-01	1	exome+100bp flanks	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-OL-A66K-01A-11D-A29N-09	32	29	3	20	9.375000e-02	1	exome+100bp flanks	34834024	8	19	2.296605e-07	5.454437e-07
TCGA-PE-A5DC-01A-12D-A27P-09	126	106	20	78	1.587302e-01	1	exome+100bp flanks	34834024	27	73	7.751042e-07	2.095652e-06
TCGA-PE-A5DD-01A-12D-A27P-09	65	55	10	41	1.538462e-01	1	exome+100bp flanks	34834024	14	37	4.019059e-07	1.062180e-06
TCGA-PE-A5DE-01A-11D-A27P-09	433	378	55	273	1.270208e-01	1	exome+100bp flanks	34834024	98	249	2.813341e-06	7.148184e-06