name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-BA-4074-01A-01D-1434-08	179	168	11	129	6.145251e-02	1	exome+100bp flanks	34834024	36	120	1.033472e-06	3.444908e-06
TCGA-BA-4075-01A-01D-1434-08	231	219	12	163	5.194805e-02	1	exome+100bp flanks	34834024	54	151	1.550208e-06	4.334842e-06
TCGA-BA-4076-01A-01D-1434-08	415	382	33	296	7.951807e-02	1	exome+100bp flanks	34834024	84	280	2.411435e-06	8.038118e-06
TCGA-BA-4077-01B-01D-1434-08	397	370	27	275	6.801008e-02	1	exome+100bp flanks	34834024	91	262	2.612388e-06	7.521382e-06
TCGA-BA-4078-01A-01D-1434-08	550	509	41	381	7.454545e-02	1	exome+100bp flanks	34834024	122	364	3.502323e-06	1.044955e-05
TCGA-BA-5149-01A-01D-1512-08	150	143	7	118	4.666667e-02	1	exome+100bp flanks	34834024	24	113	6.889816e-07	3.243955e-06
TCGA-BA-5151-01A-01D-1434-08	117	108	9	80	7.692308e-02	1	exome+100bp flanks	34834024	25	76	7.176891e-07	2.181775e-06
TCGA-BA-5152-01A-02D-1870-08	621	595	26	437	4.186795e-02	1	exome+100bp flanks	34834024	148	419	4.248720e-06	1.202847e-05
TCGA-BA-5153-01A-01D-1434-08	59	55	4	45	6.779661e-02	1	exome+100bp flanks	34834024	7	42	2.009530e-07	1.205718e-06
TCGA-BA-5555-01A-01D-1512-08	174	162	12	132	6.896552e-02	1	exome+100bp flanks	34834024	30	124	8.612269e-07	3.559738e-06
TCGA-BA-5556-01A-01D-1512-08	181	166	15	129	8.287293e-02	1	exome+100bp flanks	34834024	31	121	8.899345e-07	3.473615e-06
TCGA-BA-5557-01A-01D-1512-08	71	62	9	44	1.267606e-01	1	exome+100bp flanks	34834024	18	41	5.167362e-07	1.177010e-06
TCGA-BA-5558-01A-01D-1512-08	204	194	10	130	4.901961e-02	1	exome+100bp flanks	34834024	57	118	1.636331e-06	3.387493e-06
TCGA-BA-5559-01A-01D-1512-08	106	103	3	79	2.830189e-02	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-BA-6868-01B-12D-1912-08	193	180	13	135	6.735751e-02	1	exome+100bp flanks	34834024	42	129	1.205718e-06	3.703276e-06
TCGA-BA-6869-01A-11D-1870-08	571	534	37	404	6.479860e-02	1	exome+100bp flanks	34834024	123	384	3.531030e-06	1.102370e-05
TCGA-BA-6870-01A-11D-1870-08	126	119	7	86	5.555556e-02	1	exome+100bp flanks	34834024	29	81	8.325194e-07	2.325313e-06
TCGA-BA-6871-01A-11D-1870-08	171	162	9	128	5.263158e-02	1	exome+100bp flanks	34834024	32	123	9.186421e-07	3.531030e-06
TCGA-BA-6872-01A-11D-1870-08	209	196	13	159	6.220096e-02	1	exome+100bp flanks	34834024	35	148	1.004765e-06	4.248720e-06
TCGA-BA-6873-01A-11D-1870-08	90	83	7	63	7.777778e-02	1	exome+100bp flanks	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-BA-7269-01A-11D-2012-08	123	111	12	83	9.756098e-02	1	exome+100bp flanks	34834024	28	79	8.038118e-07	2.267898e-06
TCGA-BA-A4IF-01A-11D-A25Y-08	124	118	6	96	4.838710e-02	1	exome+100bp flanks	34834024	20	92	5.741513e-07	2.641096e-06
TCGA-BA-A4IG-01A-11D-A25Y-08	150	139	11	105	7.333333e-02	1	exome+100bp flanks	34834024	32	99	9.186421e-07	2.842049e-06
TCGA-BA-A4IH-01A-11D-A25Y-08	62	57	5	47	8.064516e-02	1	exome+100bp flanks	34834024	9	45	2.583681e-07	1.291840e-06
TCGA-BA-A4II-01A-11D-A25Y-08	128	122	6	91	4.687500e-02	1	exome+100bp flanks	34834024	30	82	8.612269e-07	2.354020e-06
TCGA-BA-A6D8-01A-31D-A31L-08	148	129	19	111	1.283784e-01	1	exome+100bp flanks	34834024	17	106	4.880286e-07	3.043002e-06
TCGA-BA-A6DA-01A-31D-A31L-08	846	791	55	601	6.501182e-02	1	exome+100bp flanks	34834024	182	561	5.224777e-06	1.610494e-05
TCGA-BA-A6DB-01A-11D-A30E-08	47	44	3	32	6.382979e-02	1	exome+100bp flanks	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-BA-A6DD-01A-12D-A31L-08	79	76	3	58	3.797468e-02	1	exome+100bp flanks	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-BA-A6DE-01A-22D-A31L-08	157	145	12	107	7.643312e-02	1	exome+100bp flanks	34834024	35	101	1.004765e-06	2.899464e-06
TCGA-BA-A6DF-01A-11D-A30E-08	213	207	6	164	2.816901e-02	0	coding only	34834024	42	154	1.205718e-06	4.420965e-06
TCGA-BA-A6DG-01A-21D-A30E-08	49	44	5	25	1.020408e-01	1	exome+100bp flanks	34834024	17	24	4.880286e-07	6.889816e-07
TCGA-BA-A6DI-01A-11D-A30E-08	138	124	14	98	1.014493e-01	1	exome+100bp flanks	34834024	25	90	7.176891e-07	2.583681e-06
TCGA-BA-A6DJ-01A-11D-A30E-08	365	350	15	248	4.109589e-02	1	exome+100bp flanks	34834024	100	237	2.870756e-06	6.803693e-06
TCGA-BA-A6DL-01A-21D-A30E-08	130	121	9	95	6.923077e-02	1	exome+100bp flanks	34834024	24	90	6.889816e-07	2.583681e-06
TCGA-BB-4217-01A-11D-2078-08	41	41	0	31	0	1	exome+100bp flanks	34834024	10	31	2.870756e-07	8.899345e-07
TCGA-BB-4223-01A-01D-1434-08	389	377	12	283	3.084833e-02	1	exome+100bp flanks	34834024	89	269	2.554973e-06	7.722335e-06
TCGA-BB-4224-01A-01D-1434-08	103	96	7	75	6.796117e-02	1	exome+100bp flanks	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-BB-4225-01A-01D-1434-08	97	95	2	63	2.061856e-02	1	exome+100bp flanks	34834024	31	60	8.899345e-07	1.722454e-06
TCGA-BB-4227-01A-01D-1870-08	329	314	15	215	4.559271e-02	1	exome+100bp flanks	34834024	94	202	2.698511e-06	5.798928e-06
TCGA-BB-4228-01A-01D-1434-08	63	58	5	44	7.936508e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-BB-7861-01A-11D-2229-08	32	28	4	21	1.250000e-01	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-BB-7862-01A-21D-2229-08	485	467	18	339	3.711340e-02	1	exome+100bp flanks	34834024	120	314	3.444908e-06	9.014175e-06
TCGA-BB-7863-01A-11D-2229-08	127	119	8	85	6.299213e-02	1	exome+100bp flanks	34834024	32	80	9.186421e-07	2.296605e-06
TCGA-BB-7864-01A-11D-2229-08	105	99	6	75	5.714286e-02	1	exome+100bp flanks	34834024	21	72	6.028589e-07	2.066945e-06
TCGA-BB-7870-01A-11D-2229-08	365	333	32	253	8.767123e-02	1	exome+100bp flanks	34834024	75	242	2.153067e-06	6.947231e-06
TCGA-BB-7871-01A-11D-2229-08	546	511	35	410	6.410256e-02	1	exome+100bp flanks	34834024	97	393	2.784634e-06	1.128207e-05
TCGA-BB-7872-01A-11D-2229-08	104	98	6	72	5.769231e-02	1	exome+100bp flanks	34834024	25	68	7.176891e-07	1.952114e-06
TCGA-BB-8596-01A-11D-2394-08	114	108	6	73	5.263158e-02	1	exome+100bp flanks	34834024	34	70	9.760572e-07	2.009530e-06
TCGA-BB-8601-01A-11D-2394-08	85	79	6	60	7.058824e-02	1	exome+100bp flanks	34834024	19	56	5.454437e-07	1.607624e-06
TCGA-BB-A5HU-01A-11D-A28R-08	220	213	7	157	3.181818e-02	1	exome+100bp flanks	34834024	53	154	1.521501e-06	4.420965e-06
TCGA-BB-A5HY-01A-11D-A28R-08	262	249	13	196	4.961832e-02	1	exome+100bp flanks	34834024	45	189	1.291840e-06	5.425730e-06
TCGA-BB-A5HZ-01A-21D-A28R-08	99	91	8	62	8.080808e-02	1	exome+100bp flanks	34834024	28	57	8.038118e-07	1.636331e-06
TCGA-BB-A6UM-01A-12D-A34J-08	85	79	6	56	7.058824e-02	1	exome+100bp flanks	34834024	20	53	5.741513e-07	1.521501e-06
TCGA-BB-A6UO-01A-12D-A34J-08	135	130	5	97	3.703704e-02	1	exome+100bp flanks	34834024	33	94	9.473496e-07	2.698511e-06
TCGA-C9-A47Z-01A-11D-A24D-08	129	120	9	91	6.976744e-02	1	exome+100bp flanks	34834024	29	84	8.325194e-07	2.411435e-06
TCGA-C9-A480-01A-12D-A24D-08	66	62	4	42	6.060606e-02	1	exome+100bp flanks	34834024	19	38	5.454437e-07	1.090887e-06
TCGA-CN-4723-01A-01D-1434-08	1091	1049	42	777	3.849679e-02	1	exome+100bp flanks	34834024	260	741	7.463967e-06	2.127231e-05
TCGA-CN-4725-01A-01D-1434-08	79	73	6	51	7.594937e-02	1	exome+100bp flanks	34834024	21	50	6.028589e-07	1.435378e-06
TCGA-CN-4726-01A-01D-1434-08	108	99	9	71	8.333333e-02	1	exome+100bp flanks	34834024	27	67	7.751042e-07	1.923407e-06
TCGA-CN-4727-01A-01D-1434-08	540	510	30	396	5.555556e-02	1	exome+100bp flanks	34834024	109	373	3.129125e-06	1.070792e-05
TCGA-CN-4728-01A-01D-1434-08	166	155	11	115	6.626506e-02	1	exome+100bp flanks	34834024	38	108	1.090887e-06	3.100417e-06
TCGA-CN-4729-01A-01D-1434-08	186	173	13	122	6.989247e-02	1	exome+100bp flanks	34834024	48	108	1.377963e-06	3.100417e-06
TCGA-CN-4730-01A-01D-1434-08	205	194	11	151	5.365854e-02	1	exome+100bp flanks	34834024	40	142	1.148303e-06	4.076474e-06
TCGA-CN-4731-01A-01D-1434-08	151	145	6	100	3.973510e-02	1	exome+100bp flanks	34834024	45	96	1.291840e-06	2.755926e-06
TCGA-CN-4733-01A-02D-1870-08	52	47	5	34	9.615385e-02	1	exome+100bp flanks	34834024	13	32	3.731983e-07	9.186421e-07
TCGA-CN-4734-01A-01D-1434-08	191	188	3	133	1.570681e-02	0	coding only	34834024	51	131	1.464086e-06	3.760691e-06
TCGA-CN-4735-01A-01D-1434-08	191	178	13	132	6.806283e-02	1	exome+100bp flanks	34834024	44	127	1.263133e-06	3.645861e-06
TCGA-CN-4736-01A-01D-1434-08	123	117	6	97	4.878049e-02	1	exome+100bp flanks	34834024	17	90	4.880286e-07	2.583681e-06
TCGA-CN-4737-01A-01D-1434-08	63	58	5	40	7.936508e-02	1	exome+100bp flanks	34834024	17	34	4.880286e-07	9.760572e-07
TCGA-CN-4738-01A-02D-1512-08	138	132	6	97	4.347826e-02	1	exome+100bp flanks	34834024	34	94	9.760572e-07	2.698511e-06
TCGA-CN-4739-01A-02D-1512-08	269	251	18	189	6.691450e-02	1	exome+100bp flanks	34834024	58	178	1.665039e-06	5.109947e-06
TCGA-CN-4740-01A-01D-1434-08	187	174	13	132	6.951872e-02	1	exome+100bp flanks	34834024	39	123	1.119595e-06	3.531030e-06
TCGA-CN-4741-01A-01D-1434-08	216	202	14	150	6.481481e-02	1	exome+100bp flanks	34834024	49	139	1.406671e-06	3.990352e-06
TCGA-CN-4742-01A-02D-1512-08	105	97	8	77	7.619048e-02	1	exome+100bp flanks	34834024	20	74	5.741513e-07	2.124360e-06
TCGA-CN-5355-01A-01D-1434-08	144	134	10	108	6.944444e-02	1	exome+100bp flanks	34834024	25	103	7.176891e-07	2.956879e-06
TCGA-CN-5356-01A-01D-1434-08	433	405	28	310	6.466513e-02	1	exome+100bp flanks	34834024	91	299	2.612388e-06	8.583562e-06
TCGA-CN-5358-01A-01D-1512-08	71	68	3	55	4.225352e-02	1	exome+100bp flanks	34834024	13	50	3.731983e-07	1.435378e-06
TCGA-CN-5359-01A-01D-1434-08	198	188	10	141	5.050505e-02	1	exome+100bp flanks	34834024	44	136	1.263133e-06	3.904229e-06
TCGA-CN-5360-01A-01D-1434-08	623	582	41	451	6.581059e-02	1	exome+100bp flanks	34834024	129	419	3.703276e-06	1.202847e-05
TCGA-CN-5361-01A-01D-1434-08	145	136	9	90	6.206897e-02	1	exome+100bp flanks	34834024	46	84	1.320548e-06	2.411435e-06
TCGA-CN-5363-01A-01D-1434-08	239	225	14	164	5.857741e-02	1	exome+100bp flanks	34834024	61	155	1.751161e-06	4.449673e-06
TCGA-CN-5364-01A-01D-1434-08	163	154	9	131	5.521472e-02	1	exome+100bp flanks	34834024	20	128	5.741513e-07	3.674568e-06
TCGA-CN-5365-01A-01D-1434-08	115	101	14	78	1.217391e-01	1	exome+100bp flanks	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-CN-5366-01A-01D-1434-08	134	121	13	97	9.701493e-02	1	exome+100bp flanks	34834024	23	94	6.602740e-07	2.698511e-06
TCGA-CN-5367-01A-01D-1434-08	130	119	11	95	8.461538e-02	1	exome+100bp flanks	34834024	21	90	6.028589e-07	2.583681e-06
TCGA-CN-5369-01A-01D-1434-08	597	569	28	434	4.690117e-02	1	exome+100bp flanks	34834024	127	404	3.645861e-06	1.159786e-05
TCGA-CN-5370-01A-01D-2012-08	132	124	8	98	6.060606e-02	1	exome+100bp flanks	34834024	26	92	7.463967e-07	2.641096e-06
TCGA-CN-5373-01A-01D-1434-08	201	191	10	138	4.975124e-02	1	exome+100bp flanks	34834024	51	129	1.464086e-06	3.703276e-06
TCGA-CN-5374-01A-01D-1434-08	221	207	14	149	6.334842e-02	1	exome+100bp flanks	34834024	56	139	1.607624e-06	3.990352e-06
TCGA-CN-6010-01A-11D-1683-08	188	182	6	137	3.191489e-02	1	exome+100bp flanks	34834024	40	126	1.148303e-06	3.617153e-06
TCGA-CN-6011-01A-11D-1683-08	433	412	21	309	4.849885e-02	1	exome+100bp flanks	34834024	96	292	2.755926e-06	8.382609e-06
TCGA-CN-6012-01A-11D-1683-08	141	136	5	110	3.546099e-02	1	exome+100bp flanks	34834024	26	105	7.463967e-07	3.014294e-06
TCGA-CN-6013-01A-11D-1683-08	226	221	5	171	2.212389e-02	0	coding only	34834024	49	158	1.406671e-06	4.535795e-06
TCGA-CN-6016-01A-11D-1683-08	144	141	3	104	2.083333e-02	0	coding only	34834024	34	98	9.760572e-07	2.813341e-06
TCGA-CN-6017-01A-11D-1683-08	9	9	0	7	0	1	exome+100bp flanks	34834024	2	6	5.741513e-08	1.722454e-07
TCGA-CN-6018-01A-11D-1683-08	144	137	7	98	4.861111e-02	1	exome+100bp flanks	34834024	37	95	1.062180e-06	2.727219e-06
TCGA-CN-6019-01A-11D-1683-08	162	154	8	125	4.938272e-02	1	exome+100bp flanks	34834024	29	121	8.325194e-07	3.473615e-06
TCGA-CN-6020-01A-11D-1683-08	194	181	13	128	6.701031e-02	1	exome+100bp flanks	34834024	50	123	1.435378e-06	3.531030e-06
TCGA-CN-6021-01A-11D-1683-08	346	321	25	253	7.225434e-02	1	exome+100bp flanks	34834024	67	237	1.923407e-06	6.803693e-06
TCGA-CN-6022-01A-21D-1683-08	95	93	2	65	2.105263e-02	1	exome+100bp flanks	34834024	27	62	7.751042e-07	1.779869e-06
TCGA-CN-6023-01A-11D-1683-08	134	127	7	106	5.223881e-02	1	exome+100bp flanks	34834024	20	99	5.741513e-07	2.842049e-06
TCGA-CN-6024-01A-11D-1683-08	217	206	11	133	5.069124e-02	1	exome+100bp flanks	34834024	70	125	2.009530e-06	3.588446e-06
TCGA-CN-6988-01A-11D-1912-08	185	179	6	137	3.243243e-02	1	exome+100bp flanks	34834024	40	136	1.148303e-06	3.904229e-06
TCGA-CN-6989-01A-11D-1912-08	127	120	7	90	5.511811e-02	1	exome+100bp flanks	34834024	30	84	8.612269e-07	2.411435e-06
TCGA-CN-6992-01A-11D-1912-08	407	383	24	294	5.896806e-02	1	exome+100bp flanks	34834024	86	276	2.468851e-06	7.923288e-06
TCGA-CN-6994-01A-11D-1912-08	151	136	15	101	9.933775e-02	1	exome+100bp flanks	34834024	31	95	8.899345e-07	2.727219e-06
TCGA-CN-6995-01A-31D-2012-08	266	253	13	203	4.887218e-02	1	exome+100bp flanks	34834024	48	189	1.377963e-06	5.425730e-06
TCGA-CN-6996-01A-11D-1912-08	70	64	6	49	8.571429e-02	1	exome+100bp flanks	34834024	14	43	4.019059e-07	1.234425e-06
TCGA-CN-6997-01A-11D-2012-08	163	159	4	130	2.453988e-02	0	coding only	34834024	28	118	8.038118e-07	3.387493e-06
TCGA-CN-6998-01A-23D-2012-08	106	98	8	67	7.547170e-02	1	exome+100bp flanks	34834024	27	62	7.751042e-07	1.779869e-06
TCGA-CN-A497-01A-11D-A24D-08	417	397	20	310	4.796163e-02	1	exome+100bp flanks	34834024	83	296	2.382728e-06	8.497439e-06
TCGA-CN-A498-01A-11D-A24D-08	145	134	11	104	7.586207e-02	1	exome+100bp flanks	34834024	28	99	8.038118e-07	2.842049e-06
TCGA-CN-A499-01A-11D-A24D-08	54	49	5	38	9.259259e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-CN-A49A-01A-11D-A24D-08	149	139	10	104	6.711409e-02	1	exome+100bp flanks	34834024	34	96	9.760572e-07	2.755926e-06
TCGA-CN-A49B-01A-31D-A24D-08	129	116	13	91	1.007752e-01	1	exome+100bp flanks	34834024	24	84	6.889816e-07	2.411435e-06
TCGA-CN-A49C-01A-11D-A24D-08	76	70	6	44	7.894737e-02	1	exome+100bp flanks	34834024	26	41	7.463967e-07	1.177010e-06
TCGA-CN-A63T-01A-11D-A28R-08	320	300	20	227	6.250000e-02	1	exome+100bp flanks	34834024	71	214	2.038237e-06	6.143419e-06
TCGA-CN-A63U-01A-11D-A30E-08	651	617	34	477	5.222734e-02	1	exome+100bp flanks	34834024	133	454	3.818106e-06	1.303323e-05
TCGA-CN-A63V-01A-11D-A28R-08	100	91	9	75	9.000000e-02	1	exome+100bp flanks	34834024	15	67	4.306135e-07	1.923407e-06
TCGA-CN-A63W-01A-11D-A30E-08	484	464	20	354	4.132231e-02	1	exome+100bp flanks	34834024	102	332	2.928172e-06	9.530912e-06
TCGA-CN-A63Y-01A-11D-A30E-08	216	202	14	139	6.481481e-02	1	exome+100bp flanks	34834024	62	136	1.779869e-06	3.904229e-06
TCGA-CN-A640-01A-21D-A30E-08	102	93	9	74	8.823529e-02	1	exome+100bp flanks	34834024	17	71	4.880286e-07	2.038237e-06
TCGA-CN-A641-01A-11D-A30E-08	269	257	12	193	4.460967e-02	1	exome+100bp flanks	34834024	59	177	1.693746e-06	5.081239e-06
TCGA-CN-A642-01A-12D-A30E-08	113	105	8	84	7.079646e-02	1	exome+100bp flanks	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-CN-A6UY-01A-12D-A34J-08	57	52	5	35	8.771930e-02	1	exome+100bp flanks	34834024	17	33	4.880286e-07	9.473496e-07
TCGA-CN-A6V1-01A-12D-A34J-08	500	485	15	333	3.000000e-02	1	exome+100bp flanks	34834024	149	317	4.277427e-06	9.100298e-06
TCGA-CN-A6V3-01A-12D-A34J-08	295	282	13	208	4.406780e-02	1	exome+100bp flanks	34834024	72	201	2.066945e-06	5.770221e-06
TCGA-CN-A6V6-01A-12D-A34J-08	105	101	4	73	3.809524e-02	1	exome+100bp flanks	34834024	27	70	7.751042e-07	2.009530e-06
TCGA-CN-A6V7-01A-12D-A34J-08	68	65	3	44	4.411765e-02	1	exome+100bp flanks	34834024	20	41	5.741513e-07	1.177010e-06
TCGA-CQ-5323-01A-01D-1683-08	90	85	5	65	5.555556e-02	1	exome+100bp flanks	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-CQ-5324-01A-01D-1683-08	84	82	2	67	2.380952e-02	1	exome+100bp flanks	34834024	13	64	3.731983e-07	1.837284e-06
TCGA-CQ-5325-01A-01D-1683-08	69	67	2	54	2.898551e-02	1	exome+100bp flanks	34834024	12	53	3.444908e-07	1.521501e-06
TCGA-CQ-5326-01A-01D-1870-08	269	260	9	181	3.345725e-02	1	exome+100bp flanks	34834024	73	175	2.095652e-06	5.023824e-06
TCGA-CQ-5327-01A-01D-1683-08	281	267	14	201	4.982206e-02	1	exome+100bp flanks	34834024	64	190	1.837284e-06	5.454437e-06
TCGA-CQ-5329-01A-01D-1683-08	43	41	2	32	4.651163e-02	1	exome+100bp flanks	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-CQ-5330-01A-01D-1683-08	82	79	3	60	3.658537e-02	1	exome+100bp flanks	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-CQ-5331-01A-02D-1870-08	175	162	13	127	7.428571e-02	1	exome+100bp flanks	34834024	35	116	1.004765e-06	3.330078e-06
TCGA-CQ-5332-01A-01D-1683-08	177	163	14	124	7.909605e-02	1	exome+100bp flanks	34834024	35	116	1.004765e-06	3.330078e-06
TCGA-CQ-5333-01A-01D-2394-08	254	245	9	182	3.543307e-02	1	exome+100bp flanks	34834024	58	175	1.665039e-06	5.023824e-06
TCGA-CQ-5334-01A-01D-1683-08	227	218	9	167	3.964758e-02	1	exome+100bp flanks	34834024	49	160	1.406671e-06	4.593210e-06
TCGA-CQ-6218-01A-11D-1912-08	173	161	12	110	6.936416e-02	1	exome+100bp flanks	34834024	46	106	1.320548e-06	3.043002e-06
TCGA-CQ-6219-01A-11D-1912-08	89	87	2	63	2.247191e-02	1	exome+100bp flanks	34834024	24	62	6.889816e-07	1.779869e-06
TCGA-CQ-6220-01A-11D-1912-08	140	135	5	102	3.571429e-02	1	exome+100bp flanks	34834024	33	97	9.473496e-07	2.784634e-06
TCGA-CQ-6221-01A-11D-2078-08	139	132	7	106	5.035971e-02	1	exome+100bp flanks	34834024	25	99	7.176891e-07	2.842049e-06
TCGA-CQ-6222-01A-11D-1912-08	79	77	2	60	2.531646e-02	1	exome+100bp flanks	34834024	17	57	4.880286e-07	1.636331e-06
TCGA-CQ-6223-01A-11D-1912-08	111	106	5	80	4.504505e-02	1	exome+100bp flanks	34834024	23	76	6.602740e-07	2.181775e-06
TCGA-CQ-6224-01A-11D-1912-08	93	89	4	60	4.301075e-02	1	exome+100bp flanks	34834024	26	57	7.463967e-07	1.636331e-06
TCGA-CQ-6225-01A-11D-1912-08	191	183	8	142	4.188482e-02	1	exome+100bp flanks	34834024	39	128	1.119595e-06	3.674568e-06
TCGA-CQ-6227-01A-11D-1912-08	56	50	6	37	1.071429e-01	1	exome+100bp flanks	34834024	12	35	3.444908e-07	1.004765e-06
TCGA-CQ-6228-01A-11D-1912-08	130	125	5	104	3.846154e-02	1	exome+100bp flanks	34834024	18	93	5.167362e-07	2.669804e-06
TCGA-CQ-6229-01A-11D-1912-08	38	35	3	25	7.894737e-02	1	exome+100bp flanks	34834024	10	23	2.870756e-07	6.602740e-07
TCGA-CQ-7063-01A-11D-2394-08	172	161	11	122	6.395349e-02	1	exome+100bp flanks	34834024	37	116	1.062180e-06	3.330078e-06
TCGA-CQ-7064-01A-11D-2394-08	132	124	8	93	6.060606e-02	1	exome+100bp flanks	34834024	29	90	8.325194e-07	2.583681e-06
TCGA-CQ-7065-01A-11D-2078-08	40	39	1	27	2.500000e-02	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-CQ-7067-01A-11D-2229-08	90	82	8	68	8.888889e-02	1	exome+100bp flanks	34834024	12	61	3.444908e-07	1.751161e-06
TCGA-CQ-7068-01A-11D-2078-08	138	126	12	89	8.695652e-02	1	exome+100bp flanks	34834024	36	84	1.033472e-06	2.411435e-06
TCGA-CQ-7069-01A-11D-2394-08	116	106	10	86	8.620690e-02	1	exome+100bp flanks	34834024	20	80	5.741513e-07	2.296605e-06
TCGA-CQ-7071-01A-12D-A30E-08	556	536	20	427	3.597122e-02	1	exome+100bp flanks	34834024	98	404	2.813341e-06	1.159786e-05
TCGA-CQ-7072-01A-21D-A30E-08	153	143	10	121	6.535948e-02	1	exome+100bp flanks	34834024	22	113	6.315664e-07	3.243955e-06
TCGA-CQ-A4C6-01A-11D-A25D-08	127	118	9	94	7.086614e-02	1	exome+100bp flanks	34834024	24	90	6.889816e-07	2.583681e-06
TCGA-CQ-A4C7-01A-11D-A25D-08	75	71	4	54	5.333333e-02	1	exome+100bp flanks	34834024	17	53	4.880286e-07	1.521501e-06
TCGA-CQ-A4C9-01A-11D-A25D-08	122	115	7	84	5.737705e-02	1	exome+100bp flanks	34834024	29	80	8.325194e-07	2.296605e-06
TCGA-CQ-A4CB-01A-11D-A25D-08	107	102	5	87	4.672897e-02	1	exome+100bp flanks	34834024	15	85	4.306135e-07	2.440143e-06
TCGA-CQ-A4CD-01A-21D-A25D-08	174	169	5	140	2.873563e-02	0	coding only	34834024	26	133	7.463967e-07	3.818106e-06
TCGA-CQ-A4CE-01A-11D-A25Y-08	99	87	12	63	1.212121e-01	1	exome+100bp flanks	34834024	22	61	6.315664e-07	1.751161e-06
TCGA-CQ-A4CG-01A-11D-A25Y-08	100	89	11	69	1.100000e-01	1	exome+100bp flanks	34834024	20	67	5.741513e-07	1.923407e-06
TCGA-CQ-A4CH-01A-11D-A25Y-08	38	30	8	21	2.105263e-01	1	exome+100bp flanks	34834024	9	20	2.583681e-07	5.741513e-07
TCGA-CQ-A4CI-01A-11D-A25Y-08	128	116	12	89	9.375000e-02	1	exome+100bp flanks	34834024	27	84	7.751042e-07	2.411435e-06
TCGA-CR-5243-01A-01D-1512-08	90	87	3	66	3.333333e-02	1	exome+100bp flanks	34834024	19	60	5.454437e-07	1.722454e-06
TCGA-CR-5247-01A-01D-2012-08	95	89	6	69	6.315789e-02	1	exome+100bp flanks	34834024	20	65	5.741513e-07	1.865992e-06
TCGA-CR-5248-01A-01D-2012-08	407	390	17	302	4.176904e-02	1	exome+100bp flanks	34834024	84	282	2.411435e-06	8.095533e-06
TCGA-CR-5249-01A-01D-1512-08	67	59	8	39	1.194030e-01	1	exome+100bp flanks	34834024	18	37	5.167362e-07	1.062180e-06
TCGA-CR-5250-01A-01D-1512-08	40	39	1	32	2.500000e-02	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-CR-6467-01A-11D-1870-08	67	61	6	42	8.955224e-02	1	exome+100bp flanks	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-CR-6470-01A-11D-1870-08	50	49	1	39	2.000000e-02	1	exome+100bp flanks	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-CR-6471-01A-11D-1870-08	168	160	8	119	4.761905e-02	1	exome+100bp flanks	34834024	41	114	1.177010e-06	3.272662e-06
TCGA-CR-6472-01A-11D-1870-08	551	536	15	406	2.722323e-02	0	coding only	34834024	124	382	3.559738e-06	1.096629e-05
TCGA-CR-6473-01A-11D-1870-08	115	108	7	83	6.086957e-02	1	exome+100bp flanks	34834024	23	76	6.602740e-07	2.181775e-06
TCGA-CR-6474-01A-11D-1870-08	140	132	8	103	5.714286e-02	1	exome+100bp flanks	34834024	26	100	7.463967e-07	2.870756e-06
TCGA-CR-6477-01A-11D-1870-08	109	100	9	77	8.256881e-02	1	exome+100bp flanks	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-CR-6478-01A-11D-1870-08	159	151	8	98	5.031447e-02	1	exome+100bp flanks	34834024	51	86	1.464086e-06	2.468851e-06
TCGA-CR-6480-01A-11D-1870-08	144	134	10	95	6.944444e-02	1	exome+100bp flanks	34834024	39	85	1.119595e-06	2.440143e-06
TCGA-CR-6481-01A-11D-1870-08	589	558	31	428	5.263158e-02	1	exome+100bp flanks	34834024	124	412	3.559738e-06	1.182752e-05
TCGA-CR-6482-01A-11D-1870-08	57	57	0	40	0	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-CR-6484-01A-11D-1870-08	334	326	8	243	2.395210e-02	0	coding only	34834024	77	230	2.210482e-06	6.602740e-06
TCGA-CR-6487-01A-11D-1870-08	159	150	9	120	5.660377e-02	1	exome+100bp flanks	34834024	29	114	8.325194e-07	3.272662e-06
TCGA-CR-6488-01A-12D-2078-08	47	45	2	35	4.255319e-02	1	exome+100bp flanks	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-CR-6491-01A-11D-1870-08	180	176	4	122	2.222222e-02	0	coding only	34834024	52	114	1.492793e-06	3.272662e-06
TCGA-CR-6492-01A-12D-2078-08	76	72	4	54	5.263158e-02	1	exome+100bp flanks	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-CR-6493-01A-11D-1870-08	46	42	4	34	8.695652e-02	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-CR-7364-01A-11D-2012-08	553	519	34	401	6.148282e-02	1	exome+100bp flanks	34834024	114	376	3.272662e-06	1.079404e-05
TCGA-CR-7365-01A-11D-2012-08	204	192	12	145	5.882353e-02	1	exome+100bp flanks	34834024	46	133	1.320548e-06	3.818106e-06
TCGA-CR-7367-01A-11D-2012-08	217	208	9	159	4.147465e-02	1	exome+100bp flanks	34834024	48	150	1.377963e-06	4.306135e-06
TCGA-CR-7368-01A-11D-2129-08	250	241	9	182	3.600000e-02	1	exome+100bp flanks	34834024	56	173	1.607624e-06	4.966409e-06
TCGA-CR-7369-01A-11D-2129-08	91	87	4	68	4.395604e-02	1	exome+100bp flanks	34834024	16	65	4.593210e-07	1.865992e-06
TCGA-CR-7370-01A-11D-2129-08	657	621	36	454	5.479452e-02	1	exome+100bp flanks	34834024	161	415	4.621918e-06	1.191364e-05
TCGA-CR-7371-01A-11D-2012-08	358	340	18	256	5.027933e-02	1	exome+100bp flanks	34834024	80	241	2.296605e-06	6.918523e-06
TCGA-CR-7372-01A-11D-2012-08	62	59	3	46	4.838710e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-CR-7373-01A-11D-2012-08	140	137	3	95	2.142857e-02	0	coding only	34834024	38	91	1.090887e-06	2.612388e-06
TCGA-CR-7374-01A-11D-2012-08	437	413	24	326	5.491991e-02	1	exome+100bp flanks	34834024	80	304	2.296605e-06	8.727100e-06
TCGA-CR-7376-01A-11D-2129-08	77	69	8	55	1.038961e-01	1	exome+100bp flanks	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-CR-7377-01A-11D-2012-08	156	151	5	109	3.205128e-02	1	exome+100bp flanks	34834024	39	106	1.119595e-06	3.043002e-06
TCGA-CR-7379-01A-11D-2012-08	179	172	7	117	3.910615e-02	1	exome+100bp flanks	34834024	52	111	1.492793e-06	3.186540e-06
TCGA-CR-7380-01A-11D-2012-08	118	115	3	90	2.542373e-02	0	coding only	34834024	25	86	7.176891e-07	2.468851e-06
TCGA-CR-7382-01A-11D-2129-08	104	99	5	76	4.807692e-02	1	exome+100bp flanks	34834024	20	73	5.741513e-07	2.095652e-06
TCGA-CR-7383-01A-11D-2129-08	154	143	11	110	7.142857e-02	1	exome+100bp flanks	34834024	28	104	8.038118e-07	2.985587e-06
TCGA-CR-7385-01A-11D-2012-08	59	56	3	44	5.084746e-02	1	exome+100bp flanks	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-CR-7386-01A-11D-2012-08	223	220	3	160	1.345291e-02	0	coding only	34834024	59	154	1.693746e-06	4.420965e-06
TCGA-CR-7388-01A-11D-2012-08	868	831	37	640	4.262673e-02	1	exome+100bp flanks	34834024	177	601	5.081239e-06	1.725325e-05
TCGA-CR-7389-01A-11D-2012-08	132	131	1	96	7.575758e-03	0	coding only	34834024	35	89	1.004765e-06	2.554973e-06
TCGA-CR-7390-01A-11D-2012-08	172	161	11	109	6.395349e-02	1	exome+100bp flanks	34834024	51	104	1.464086e-06	2.985587e-06
TCGA-CR-7391-01A-11D-2012-08	14	13	1	11	7.142857e-02	1	exome+100bp flanks	34834024	2	10	5.741513e-08	2.870756e-07
TCGA-CR-7392-01A-11D-2012-08	40	39	1	32	2.500000e-02	1	exome+100bp flanks	34834024	6	29	1.722454e-07	8.325194e-07
TCGA-CR-7393-01A-11D-2012-08	5	4	1	3	2.000000e-01	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-CR-7394-01A-11D-2012-08	218	210	8	148	3.669725e-02	1	exome+100bp flanks	34834024	61	143	1.751161e-06	4.105182e-06
TCGA-CR-7395-01A-11D-2012-08	210	203	7	141	3.333333e-02	1	exome+100bp flanks	34834024	58	131	1.665039e-06	3.760691e-06
TCGA-CR-7397-01A-11D-2012-08	57	55	2	40	3.508772e-02	1	exome+100bp flanks	34834024	14	36	4.019059e-07	1.033472e-06
TCGA-CR-7398-01A-11D-2012-08	414	391	23	294	5.555556e-02	1	exome+100bp flanks	34834024	94	284	2.698511e-06	8.152948e-06
TCGA-CR-7399-01A-11D-2012-08	343	318	25	254	7.288630e-02	1	exome+100bp flanks	34834024	60	240	1.722454e-06	6.889816e-06
TCGA-CR-7401-01A-11D-2012-08	111	104	7	70	6.306306e-02	1	exome+100bp flanks	34834024	33	69	9.473496e-07	1.980822e-06
TCGA-CR-7402-01A-11D-2012-08	1147	1097	50	852	4.359198e-02	1	exome+100bp flanks	34834024	233	799	6.688863e-06	2.293734e-05
TCGA-CR-7404-01A-11D-2129-08	153	143	10	104	6.535948e-02	1	exome+100bp flanks	34834024	34	96	9.760572e-07	2.755926e-06
TCGA-CV-5430-01A-02D-1683-08	186	176	10	130	5.376344e-02	1	exome+100bp flanks	34834024	42	121	1.205718e-06	3.473615e-06
TCGA-CV-5431-01A-01D-1512-08	105	103	2	75	1.904762e-02	0	coding only	34834024	28	71	8.038118e-07	2.038237e-06
TCGA-CV-5432-01A-02D-1683-08	337	319	18	234	5.341246e-02	1	exome+100bp flanks	34834024	79	222	2.267898e-06	6.373079e-06
TCGA-CV-5434-01A-01D-1683-08	177	170	7	136	3.954802e-02	1	exome+100bp flanks	34834024	34	131	9.760572e-07	3.760691e-06
TCGA-CV-5435-01A-01D-1683-08	145	134	11	97	7.586207e-02	1	exome+100bp flanks	34834024	33	92	9.473496e-07	2.641096e-06
TCGA-CV-5436-01A-01D-1512-08	138	122	16	92	1.159420e-01	1	exome+100bp flanks	34834024	28	82	8.038118e-07	2.354020e-06
TCGA-CV-5439-01A-01D-1683-08	133	128	5	92	3.759398e-02	1	exome+100bp flanks	34834024	33	88	9.473496e-07	2.526266e-06
TCGA-CV-5440-01A-01D-1512-08	146	136	10	102	6.849315e-02	1	exome+100bp flanks	34834024	31	99	8.899345e-07	2.842049e-06
TCGA-CV-5441-01A-01D-1512-08	465	437	28	333	6.021505e-02	1	exome+100bp flanks	34834024	94	313	2.698511e-06	8.985468e-06
TCGA-CV-5442-01A-01D-1512-08	293	281	12	226	4.095563e-02	1	exome+100bp flanks	34834024	52	212	1.492793e-06	6.086004e-06
TCGA-CV-5443-01A-01D-1512-08	91	74	17	50	1.868132e-01	1	exome+100bp flanks	34834024	23	49	6.602740e-07	1.406671e-06
TCGA-CV-5444-01A-02D-1512-08	175	160	15	112	8.571429e-02	1	exome+100bp flanks	34834024	43	107	1.234425e-06	3.071709e-06
TCGA-CV-5966-01A-11D-1683-08	136	128	8	99	5.882353e-02	1	exome+100bp flanks	34834024	29	93	8.325194e-07	2.669804e-06
TCGA-CV-5970-01A-11D-1683-08	243	230	13	170	5.349794e-02	1	exome+100bp flanks	34834024	58	162	1.665039e-06	4.650625e-06
TCGA-CV-5971-01A-11D-1683-08	38	35	3	21	7.894737e-02	1	exome+100bp flanks	34834024	13	19	3.731983e-07	5.454437e-07
TCGA-CV-5973-01A-11D-1683-08	82	77	5	52	6.097561e-02	1	exome+100bp flanks	34834024	23	48	6.602740e-07	1.377963e-06
TCGA-CV-5976-01A-11D-1683-08	97	92	5	67	5.154639e-02	1	exome+100bp flanks	34834024	24	63	6.889816e-07	1.808577e-06
TCGA-CV-5977-01A-11D-1683-08	124	114	10	77	8.064516e-02	1	exome+100bp flanks	34834024	34	72	9.760572e-07	2.066945e-06
TCGA-CV-5978-01A-11D-1683-08	222	205	17	161	7.657658e-02	1	exome+100bp flanks	34834024	42	153	1.205718e-06	4.392257e-06
TCGA-CV-5979-01A-11D-1683-08	49	44	5	36	1.020408e-01	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-CV-6003-01A-11D-1683-08	136	126	10	101	7.352941e-02	1	exome+100bp flanks	34834024	25	93	7.176891e-07	2.669804e-06
TCGA-CV-6433-01A-11D-1683-08	74	71	3	54	4.054054e-02	1	exome+100bp flanks	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-CV-6436-01A-11D-1683-08	94	91	3	70	3.191489e-02	1	exome+100bp flanks	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-CV-6441-01A-11D-1683-08	281	269	12	201	4.270463e-02	1	exome+100bp flanks	34834024	63	187	1.808577e-06	5.368315e-06
TCGA-CV-6933-01A-11D-1912-08	145	135	10	104	6.896552e-02	1	exome+100bp flanks	34834024	31	96	8.899345e-07	2.755926e-06
TCGA-CV-6934-01A-11D-1912-08	124	109	15	83	1.209677e-01	1	exome+100bp flanks	34834024	25	79	7.176891e-07	2.267898e-06
TCGA-CV-6935-01A-11D-1912-08	269	254	15	201	5.576208e-02	1	exome+100bp flanks	34834024	48	184	1.377963e-06	5.282192e-06
TCGA-CV-6936-01A-11D-1912-08	332	322	10	238	3.012048e-02	1	exome+100bp flanks	34834024	83	227	2.382728e-06	6.516617e-06
TCGA-CV-6937-01A-11D-2012-08	159	154	5	115	3.144654e-02	1	exome+100bp flanks	34834024	34	108	9.760572e-07	3.100417e-06
TCGA-CV-6938-01A-11D-1912-08	178	171	7	140	3.932584e-02	1	exome+100bp flanks	34834024	30	131	8.612269e-07	3.760691e-06
TCGA-CV-6939-01A-11D-1912-08	58	53	5	41	8.620690e-02	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-CV-6940-01A-11D-1912-08	162	156	6	115	3.703704e-02	1	exome+100bp flanks	34834024	39	107	1.119595e-06	3.071709e-06
TCGA-CV-6941-01A-11D-1912-08	176	161	15	119	8.522727e-02	1	exome+100bp flanks	34834024	40	112	1.148303e-06	3.215247e-06
TCGA-CV-6942-01A-21D-2012-08	270	261	9	199	3.333333e-02	1	exome+100bp flanks	34834024	58	189	1.665039e-06	5.425730e-06
TCGA-CV-6943-01A-11D-1912-08	80	76	4	58	5.000000e-02	1	exome+100bp flanks	34834024	17	52	4.880286e-07	1.492793e-06
TCGA-CV-6945-01A-11D-1912-08	157	149	8	108	5.095541e-02	1	exome+100bp flanks	34834024	37	101	1.062180e-06	2.899464e-06
TCGA-CV-6948-01A-11D-1912-08	245	234	11	176	4.489796e-02	1	exome+100bp flanks	34834024	53	168	1.521501e-06	4.822871e-06
TCGA-CV-6950-01A-11D-1912-08	73	67	6	51	8.219178e-02	1	exome+100bp flanks	34834024	16	46	4.593210e-07	1.320548e-06
TCGA-CV-6951-01A-11D-1912-08	159	153	6	117	3.773585e-02	1	exome+100bp flanks	34834024	33	109	9.473496e-07	3.129125e-06
TCGA-CV-6952-01A-11D-1912-08	204	199	5	149	2.450980e-02	0	coding only	34834024	47	138	1.349256e-06	3.961644e-06
TCGA-CV-6953-01A-11D-1912-08	129	121	8	97	6.201550e-02	1	exome+100bp flanks	34834024	22	96	6.315664e-07	2.755926e-06
TCGA-CV-6954-01A-11D-1912-08	195	184	11	142	5.641026e-02	1	exome+100bp flanks	34834024	41	133	1.177010e-06	3.818106e-06
TCGA-CV-6955-01A-11D-2012-08	155	151	4	113	2.580645e-02	0	coding only	34834024	36	109	1.033472e-06	3.129125e-06
TCGA-CV-6956-01A-21D-2012-08	234	222	12	157	5.128205e-02	1	exome+100bp flanks	34834024	64	150	1.837284e-06	4.306135e-06
TCGA-CV-6959-01A-11D-1912-08	81	73	8	53	9.876543e-02	1	exome+100bp flanks	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-CV-6960-01A-41D-2012-08	221	206	15	157	6.787330e-02	1	exome+100bp flanks	34834024	48	148	1.377963e-06	4.248720e-06
TCGA-CV-6961-01A-21D-1912-08	719	679	40	505	5.563282e-02	1	exome+100bp flanks	34834024	166	480	4.765456e-06	1.377963e-05
TCGA-CV-6962-01A-11D-1912-08	186	173	13	146	6.989247e-02	1	exome+100bp flanks	34834024	25	134	7.176891e-07	3.846814e-06
TCGA-CV-7089-01A-11D-2012-08	203	191	12	148	5.911330e-02	1	exome+100bp flanks	34834024	42	143	1.205718e-06	4.105182e-06
TCGA-CV-7090-01A-11D-2012-08	60	56	4	41	6.666667e-02	1	exome+100bp flanks	34834024	13	35	3.731983e-07	1.004765e-06
TCGA-CV-7091-01A-11D-2012-08	164	155	9	120	5.487805e-02	1	exome+100bp flanks	34834024	33	116	9.473496e-07	3.330078e-06
TCGA-CV-7095-01A-21D-2012-08	287	274	13	207	4.529617e-02	1	exome+100bp flanks	34834024	63	200	1.808577e-06	5.741513e-06
TCGA-CV-7097-01A-11D-2012-08	124	110	14	78	1.129032e-01	1	exome+100bp flanks	34834024	30	75	8.612269e-07	2.153067e-06
TCGA-CV-7099-01A-41D-2012-08	360	348	12	257	3.333333e-02	1	exome+100bp flanks	34834024	87	246	2.497558e-06	7.062061e-06
TCGA-CV-7100-01A-11D-2012-08	22	21	1	17	4.545455e-02	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-CV-7101-01A-11D-2012-08	244	229	15	176	6.147541e-02	1	exome+100bp flanks	34834024	53	169	1.521501e-06	4.851578e-06
TCGA-CV-7102-01A-11D-2012-08	170	163	7	127	4.117647e-02	1	exome+100bp flanks	34834024	36	120	1.033472e-06	3.444908e-06
TCGA-CV-7103-01A-21D-2012-08	62	53	9	40	1.451613e-01	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-CV-7104-01A-11D-2012-08	128	118	10	92	7.812500e-02	1	exome+100bp flanks	34834024	26	90	7.463967e-07	2.583681e-06
TCGA-CV-7177-01A-11D-2012-08	149	140	9	106	6.040268e-02	1	exome+100bp flanks	34834024	34	102	9.760572e-07	2.928172e-06
TCGA-CV-7178-01A-21D-2012-08	146	138	8	101	5.479452e-02	1	exome+100bp flanks	34834024	36	98	1.033472e-06	2.813341e-06
TCGA-CV-7180-01A-11D-2012-08	80	77	3	58	3.750000e-02	1	exome+100bp flanks	34834024	18	56	5.167362e-07	1.607624e-06
TCGA-CV-7183-01A-11D-2012-08	81	79	2	61	2.469136e-02	1	exome+100bp flanks	34834024	18	55	5.167362e-07	1.578916e-06
TCGA-CV-7235-01A-11D-2012-08	165	160	5	117	3.030303e-02	1	exome+100bp flanks	34834024	41	110	1.177010e-06	3.157832e-06
TCGA-CV-7236-01A-11D-2012-08	66	63	3	42	4.545455e-02	1	exome+100bp flanks	34834024	20	41	5.741513e-07	1.177010e-06
TCGA-CV-7238-01A-11D-2012-08	85	78	7	56	8.235294e-02	1	exome+100bp flanks	34834024	19	50	5.454437e-07	1.435378e-06
TCGA-CV-7242-01A-11D-2012-08	368	344	24	276	6.521739e-02	1	exome+100bp flanks	34834024	66	263	1.894699e-06	7.550090e-06
TCGA-CV-7243-01A-11D-2012-08	92	87	5	65	5.434783e-02	1	exome+100bp flanks	34834024	20	59	5.741513e-07	1.693746e-06
TCGA-CV-7245-01A-11D-2012-08	607	577	30	441	4.942339e-02	1	exome+100bp flanks	34834024	128	415	3.674568e-06	1.191364e-05
TCGA-CV-7247-01A-11D-2012-08	92	85	7	67	7.608696e-02	1	exome+100bp flanks	34834024	18	65	5.167362e-07	1.865992e-06
TCGA-CV-7248-01A-11D-2012-08	355	334	21	253	5.915493e-02	1	exome+100bp flanks	34834024	76	243	2.181775e-06	6.975938e-06
TCGA-CV-7250-01A-11D-2012-08	254	242	12	176	4.724409e-02	1	exome+100bp flanks	34834024	64	167	1.837284e-06	4.794163e-06
TCGA-CV-7252-01A-11D-2012-08	277	261	16	190	5.776173e-02	1	exome+100bp flanks	34834024	67	170	1.923407e-06	4.880286e-06
TCGA-CV-7253-01A-11D-2012-08	229	214	15	171	6.550218e-02	1	exome+100bp flanks	34834024	42	157	1.205718e-06	4.507088e-06
TCGA-CV-7254-01A-11D-2012-08	309	292	17	225	5.501618e-02	1	exome+100bp flanks	34834024	63	219	1.808577e-06	6.286957e-06
TCGA-CV-7255-01A-11D-2012-08	134	130	4	102	2.985075e-02	0	coding only	34834024	27	97	7.751042e-07	2.784634e-06
TCGA-CV-7261-01A-11D-2012-08	140	135	5	107	3.571429e-02	1	exome+100bp flanks	34834024	27	102	7.751042e-07	2.928172e-06
TCGA-CV-7263-01A-11D-2012-08	131	126	5	104	3.816794e-02	1	exome+100bp flanks	34834024	19	98	5.454437e-07	2.813341e-06
TCGA-CV-7406-01A-11D-2078-08	240	231	9	167	3.750000e-02	1	exome+100bp flanks	34834024	62	159	1.779869e-06	4.564503e-06
TCGA-CV-7407-01A-11D-2078-08	160	150	10	110	6.250000e-02	1	exome+100bp flanks	34834024	37	105	1.062180e-06	3.014294e-06
TCGA-CV-7409-01A-31D-2229-08	373	352	21	279	5.630027e-02	1	exome+100bp flanks	34834024	71	258	2.038237e-06	7.406552e-06
TCGA-CV-7410-01A-21D-2078-08	53	53	0	40	0	1	exome+100bp flanks	34834024	13	35	3.731983e-07	1.004765e-06
TCGA-CV-7411-01A-11D-2078-08	142	139	3	103	2.112676e-02	0	coding only	34834024	34	97	9.760572e-07	2.784634e-06
TCGA-CV-7413-01A-11D-2078-08	94	86	8	64	8.510638e-02	1	exome+100bp flanks	34834024	22	60	6.315664e-07	1.722454e-06
TCGA-CV-7414-01A-11D-2078-08	320	309	11	226	3.437500e-02	1	exome+100bp flanks	34834024	78	218	2.239190e-06	6.258249e-06
TCGA-CV-7415-01A-11D-2078-08	99	94	5	66	5.050505e-02	1	exome+100bp flanks	34834024	24	61	6.889816e-07	1.751161e-06
TCGA-CV-7416-01A-11D-2078-08	96	92	4	69	4.166667e-02	1	exome+100bp flanks	34834024	23	67	6.602740e-07	1.923407e-06
TCGA-CV-7418-01A-11D-2078-08	205	195	10	149	4.878049e-02	1	exome+100bp flanks	34834024	45	135	1.291840e-06	3.875521e-06
TCGA-CV-7421-01A-11D-2078-08	87	83	4	54	4.597701e-02	1	exome+100bp flanks	34834024	27	53	7.751042e-07	1.521501e-06
TCGA-CV-7422-01A-21D-2078-08	168	158	10	115	5.952381e-02	1	exome+100bp flanks	34834024	41	109	1.177010e-06	3.129125e-06
TCGA-CV-7423-01A-11D-2078-08	104	97	7	63	6.730769e-02	1	exome+100bp flanks	34834024	32	54	9.186421e-07	1.550208e-06
TCGA-CV-7424-01A-11D-2078-08	238	227	11	170	4.621849e-02	1	exome+100bp flanks	34834024	53	160	1.521501e-06	4.593210e-06
TCGA-CV-7425-01A-11D-2078-08	149	138	11	99	7.382550e-02	1	exome+100bp flanks	34834024	39	93	1.119595e-06	2.669804e-06
TCGA-CV-7427-01A-11D-2078-08	527	508	19	385	3.605313e-02	1	exome+100bp flanks	34834024	117	368	3.358785e-06	1.056438e-05
TCGA-CV-7429-01A-11D-2129-08	65	63	2	47	3.076923e-02	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-CV-7430-01A-11D-2129-08	132	119	13	91	9.848485e-02	1	exome+100bp flanks	34834024	28	88	8.038118e-07	2.526266e-06
TCGA-CV-7432-01A-11D-2129-08	193	186	7	140	3.626943e-02	1	exome+100bp flanks	34834024	43	133	1.234425e-06	3.818106e-06
TCGA-CV-7433-01A-11D-2129-08	148	142	6	107	4.054054e-02	1	exome+100bp flanks	34834024	34	103	9.760572e-07	2.956879e-06
TCGA-CV-7434-01A-11D-2129-08	113	108	5	83	4.424779e-02	1	exome+100bp flanks	34834024	25	78	7.176891e-07	2.239190e-06
TCGA-CV-7435-01A-11D-2129-08	98	95	3	75	3.061224e-02	1	exome+100bp flanks	34834024	19	69	5.454437e-07	1.980822e-06
TCGA-CV-7437-01A-21D-2129-08	170	164	6	121	3.529412e-02	1	exome+100bp flanks	34834024	42	114	1.205718e-06	3.272662e-06
TCGA-CV-7438-01A-21D-2129-08	121	115	6	85	4.958678e-02	1	exome+100bp flanks	34834024	29	85	8.325194e-07	2.440143e-06
TCGA-CV-7440-01A-11D-2129-08	261	243	18	200	6.896552e-02	1	exome+100bp flanks	34834024	40	190	1.148303e-06	5.454437e-06
TCGA-CV-7446-01A-11D-2229-08	180	170	10	131	5.555556e-02	1	exome+100bp flanks	34834024	38	125	1.090887e-06	3.588446e-06
TCGA-CV-7568-01A-11D-2229-08	2937	2822	115	1884	3.915560e-02	1	exome+100bp flanks	34834024	882	1801	2.532007e-05	5.170232e-05
TCGA-CV-A45O-01A-21D-A24D-08	182	177	5	145	2.747253e-02	0	coding only	34834024	30	135	8.612269e-07	3.875521e-06
TCGA-CV-A45P-01A-11D-A24D-08	201	185	16	136	7.960199e-02	1	exome+100bp flanks	34834024	40	129	1.148303e-06	3.703276e-06
TCGA-CV-A45Q-01A-11D-A24D-08	350	331	19	244	5.428571e-02	1	exome+100bp flanks	34834024	82	228	2.354020e-06	6.545325e-06
TCGA-CV-A45R-01A-11D-A24D-08	110	103	7	77	6.363636e-02	1	exome+100bp flanks	34834024	25	76	7.176891e-07	2.181775e-06
TCGA-CV-A45T-01A-11D-A24D-08	21	17	4	12	1.904762e-01	1	exome+100bp flanks	34834024	5	10	1.435378e-07	2.870756e-07
TCGA-CV-A45U-01A-12D-A24D-08	252	245	7	172	2.777778e-02	0	coding only	34834024	69	163	1.980822e-06	4.679333e-06
TCGA-CV-A45V-01A-21D-A25D-08	132	128	4	95	3.030303e-02	1	exome+100bp flanks	34834024	33	88	9.473496e-07	2.526266e-06
TCGA-CV-A45W-01A-11D-A25D-08	748	700	48	556	6.417112e-02	1	exome+100bp flanks	34834024	136	525	3.904229e-06	1.507147e-05
TCGA-CV-A45X-01A-21D-A25D-08	138	130	8	88	5.797101e-02	1	exome+100bp flanks	34834024	39	84	1.119595e-06	2.411435e-06
TCGA-CV-A45Y-01A-11D-A25D-08	92	91	1	67	1.086957e-02	1	exome+100bp flanks	34834024	22	65	6.315664e-07	1.865992e-06
TCGA-CV-A45Z-01A-21D-A25D-08	858	816	42	627	4.895105e-02	1	exome+100bp flanks	34834024	175	604	5.023824e-06	1.733937e-05
TCGA-CV-A460-01A-21D-A25D-08	82	78	4	63	4.878049e-02	1	exome+100bp flanks	34834024	13	60	3.731983e-07	1.722454e-06
TCGA-CV-A461-01A-41D-A25Y-08	714	689	25	523	3.501401e-02	1	exome+100bp flanks	34834024	158	490	4.535795e-06	1.406671e-05
TCGA-CV-A463-01A-11D-A25Y-08	262	248	14	180	5.343511e-02	1	exome+100bp flanks	34834024	67	170	1.923407e-06	4.880286e-06
TCGA-CV-A464-01A-11D-A25Y-08	37	34	3	19	8.108108e-02	1	exome+100bp flanks	34834024	15	16	4.306135e-07	4.593210e-07
TCGA-CV-A465-01A-11D-A25Y-08	50	47	3	37	6.000000e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-CV-A468-01A-11D-A25Y-08	647	625	22	419	3.400309e-02	1	exome+100bp flanks	34834024	196	395	5.626683e-06	1.133949e-05
TCGA-CV-A6JD-01A-11D-A31L-08	112	106	6	83	5.357143e-02	1	exome+100bp flanks	34834024	21	78	6.028589e-07	2.239190e-06
TCGA-CV-A6JE-01A-11D-A31L-08	167	157	10	121	5.988024e-02	1	exome+100bp flanks	34834024	34	116	9.760572e-07	3.330078e-06
TCGA-CV-A6JM-01A-11D-A31L-08	352	331	21	222	5.965909e-02	1	exome+100bp flanks	34834024	102	207	2.928172e-06	5.942466e-06
TCGA-CV-A6JN-01A-11D-A31L-08	95	92	3	70	3.157895e-02	1	exome+100bp flanks	34834024	21	65	6.028589e-07	1.865992e-06
TCGA-CV-A6JO-01B-11D-A34J-08	96	94	2	72	2.083333e-02	1	exome+100bp flanks	34834024	21	65	6.028589e-07	1.865992e-06
TCGA-CV-A6JT-01A-11D-A31L-08	69	66	3	50	4.347826e-02	1	exome+100bp flanks	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-CV-A6JU-01A-11D-A31L-08	173	162	11	118	6.358382e-02	1	exome+100bp flanks	34834024	42	114	1.205718e-06	3.272662e-06
TCGA-CV-A6JY-01A-11D-A31L-08	116	110	6	89	5.172414e-02	1	exome+100bp flanks	34834024	19	86	5.454437e-07	2.468851e-06
TCGA-CV-A6JZ-01A-11D-A31L-08	141	137	4	101	2.836879e-02	0	coding only	34834024	35	95	1.004765e-06	2.727219e-06
TCGA-CV-A6K0-01B-21D-A31L-08	35	32	3	22	8.571429e-02	1	exome+100bp flanks	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-CV-A6K1-01A-11D-A31L-08	637	590	47	450	7.378336e-02	1	exome+100bp flanks	34834024	130	424	3.731983e-06	1.217201e-05
TCGA-CV-A6K2-01A-11D-A31L-08	849	815	34	585	4.004711e-02	1	exome+100bp flanks	34834024	219	553	6.286957e-06	1.587528e-05
TCGA-CX-7082-01A-11D-2012-08	119	111	8	83	6.722689e-02	1	exome+100bp flanks	34834024	28	79	8.038118e-07	2.267898e-06
TCGA-CX-7085-01A-21D-2012-08	181	174	7	141	3.867403e-02	1	exome+100bp flanks	34834024	32	132	9.186421e-07	3.789399e-06
TCGA-CX-7086-01A-11D-2078-08	285	269	16	208	5.614035e-02	1	exome+100bp flanks	34834024	58	194	1.665039e-06	5.569268e-06
TCGA-CX-7219-01A-11D-2012-08	140	135	5	106	3.571429e-02	1	exome+100bp flanks	34834024	28	96	8.038118e-07	2.755926e-06
TCGA-CX-A4AQ-01A-11D-A25D-08	123	116	7	90	5.691057e-02	1	exome+100bp flanks	34834024	23	89	6.602740e-07	2.554973e-06
TCGA-D6-6515-01A-21D-1870-08	73	70	3	50	4.109589e-02	1	exome+100bp flanks	34834024	19	47	5.454437e-07	1.349256e-06
TCGA-D6-6516-01A-11D-1870-08	2389	2266	123	1495	5.148598e-02	1	exome+100bp flanks	34834024	728	1418	2.089911e-05	4.070733e-05
TCGA-D6-6517-01A-11D-1870-08	88	80	8	62	9.090909e-02	1	exome+100bp flanks	34834024	15	56	4.306135e-07	1.607624e-06
TCGA-D6-6823-01A-11D-1912-08	121	113	8	93	6.611570e-02	1	exome+100bp flanks	34834024	18	87	5.167362e-07	2.497558e-06
TCGA-D6-6824-01A-11D-1912-08	78	74	4	60	5.128205e-02	1	exome+100bp flanks	34834024	13	56	3.731983e-07	1.607624e-06
TCGA-D6-6825-01A-21D-1912-08	87	83	4	58	4.597701e-02	1	exome+100bp flanks	34834024	23	52	6.602740e-07	1.492793e-06
TCGA-D6-6826-01A-11D-1912-08	122	114	8	89	6.557377e-02	1	exome+100bp flanks	34834024	24	86	6.889816e-07	2.468851e-06
TCGA-D6-6827-01A-11D-1912-08	20	19	1	13	5.000000e-02	1	exome+100bp flanks	34834024	6	13	1.722454e-07	3.731983e-07
TCGA-D6-8568-01A-11D-2394-08	125	119	6	99	4.800000e-02	1	exome+100bp flanks	34834024	19	92	5.454437e-07	2.641096e-06
TCGA-D6-8569-01A-11D-2394-08	160	151	9	110	5.625000e-02	1	exome+100bp flanks	34834024	39	107	1.119595e-06	3.071709e-06
TCGA-D6-A4Z9-01A-11D-A25D-08	113	107	6	79	5.309735e-02	1	exome+100bp flanks	34834024	27	71	7.751042e-07	2.038237e-06
TCGA-D6-A4ZB-01A-11D-A25D-08	224	219	5	171	2.232143e-02	0	coding only	34834024	47	162	1.349256e-06	4.650625e-06
TCGA-D6-A6EK-01A-11D-A31L-08	207	192	15	150	7.246377e-02	1	exome+100bp flanks	34834024	41	141	1.177010e-06	4.047767e-06
TCGA-D6-A6EM-01A-21D-A31L-08	118	116	2	93	1.694915e-02	0	coding only	34834024	23	86	6.602740e-07	2.468851e-06
TCGA-D6-A6EN-01A-11D-A31L-08	131	126	5	94	3.816794e-02	1	exome+100bp flanks	34834024	31	89	8.899345e-07	2.554973e-06
TCGA-D6-A6EO-01A-11D-A31L-08	106	100	6	82	5.660377e-02	1	exome+100bp flanks	34834024	17	80	4.880286e-07	2.296605e-06
TCGA-D6-A6EP-01A-11D-A31L-08	146	141	5	109	3.424658e-02	1	exome+100bp flanks	34834024	31	98	8.899345e-07	2.813341e-06
TCGA-D6-A6EQ-01A-11D-A31L-08	115	104	11	80	9.565217e-02	1	exome+100bp flanks	34834024	23	76	6.602740e-07	2.181775e-06
TCGA-D6-A6ES-01A-12D-A31L-08	243	228	15	171	6.172840e-02	1	exome+100bp flanks	34834024	54	159	1.550208e-06	4.564503e-06
TCGA-D6-A74Q-01A-11D-A34J-08	533	505	28	367	5.253283e-02	1	exome+100bp flanks	34834024	131	354	3.760691e-06	1.016248e-05
TCGA-DQ-5624-01A-01D-1870-08	129	120	9	92	6.976744e-02	1	exome+100bp flanks	34834024	25	86	7.176891e-07	2.468851e-06
TCGA-DQ-5625-01A-01D-1870-08	237	221	16	175	6.751055e-02	1	exome+100bp flanks	34834024	44	161	1.263133e-06	4.621918e-06
TCGA-DQ-5629-01A-01D-1870-08	401	377	24	279	5.985037e-02	1	exome+100bp flanks	34834024	91	268	2.612388e-06	7.693627e-06
TCGA-DQ-5630-01A-01D-1870-08	98	92	6	71	6.122449e-02	1	exome+100bp flanks	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-DQ-5631-01A-01D-1870-08	118	111	7	80	5.932203e-02	1	exome+100bp flanks	34834024	29	73	8.325194e-07	2.095652e-06
TCGA-DQ-7588-01A-11D-2078-08	131	124	7	94	5.343511e-02	1	exome+100bp flanks	34834024	29	90	8.325194e-07	2.583681e-06
TCGA-DQ-7589-01A-11D-2229-08	426	401	25	304	5.868545e-02	1	exome+100bp flanks	34834024	94	283	2.698511e-06	8.124241e-06
TCGA-DQ-7590-01A-11D-2229-08	60	54	6	37	1.000000e-01	1	exome+100bp flanks	34834024	15	35	4.306135e-07	1.004765e-06
TCGA-DQ-7591-01A-11D-2078-08	47	43	4	33	8.510638e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-DQ-7592-01A-11D-2078-08	99	90	9	65	9.090909e-02	1	exome+100bp flanks	34834024	25	60	7.176891e-07	1.722454e-06
TCGA-DQ-7593-01A-11D-2229-08	42	36	6	29	1.428571e-01	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-DQ-7594-01A-11D-2229-08	409	385	24	260	5.867971e-02	1	exome+100bp flanks	34834024	123	251	3.531030e-06	7.205599e-06
TCGA-DQ-7595-01A-11D-2229-08	417	391	26	305	6.235012e-02	1	exome+100bp flanks	34834024	79	288	2.267898e-06	8.267779e-06
TCGA-DQ-7596-01A-11D-2229-08	41	39	2	33	4.878049e-02	1	exome+100bp flanks	34834024	5	33	1.435378e-07	9.473496e-07
TCGA-F7-7848-01A-11D-2129-08	394	369	25	275	6.345178e-02	1	exome+100bp flanks	34834024	91	262	2.612388e-06	7.521382e-06
TCGA-F7-8489-01A-31D-2394-08	176	162	14	120	7.954545e-02	1	exome+100bp flanks	34834024	42	113	1.205718e-06	3.243955e-06
TCGA-F7-A50G-01A-11D-A25Y-08	122	116	6	85	4.918033e-02	1	exome+100bp flanks	34834024	30	84	8.612269e-07	2.411435e-06
TCGA-F7-A50I-01A-11D-A28R-08	181	176	5	136	2.762431e-02	0	coding only	34834024	38	134	1.090887e-06	3.846814e-06
TCGA-F7-A50J-01A-21D-A28R-08	220	207	13	149	5.909091e-02	1	exome+100bp flanks	34834024	56	137	1.607624e-06	3.932936e-06
TCGA-F7-A61S-01A-11D-A28R-08	149	140	9	104	6.040268e-02	1	exome+100bp flanks	34834024	32	96	9.186421e-07	2.755926e-06
TCGA-F7-A61V-01A-11D-A28R-08	121	118	3	94	2.479339e-02	0	coding only	34834024	23	90	6.602740e-07	2.583681e-06
TCGA-F7-A61W-01A-11D-A28R-08	85	81	4	61	4.705882e-02	1	exome+100bp flanks	34834024	19	57	5.454437e-07	1.636331e-06
TCGA-F7-A620-01A-11D-A28R-08	93	84	9	52	9.677419e-02	1	exome+100bp flanks	34834024	31	48	8.899345e-07	1.377963e-06
TCGA-F7-A622-01A-11D-A28R-08	85	80	5	61	5.882353e-02	1	exome+100bp flanks	34834024	18	58	5.167362e-07	1.665039e-06
TCGA-F7-A623-01A-11D-A28R-08	248	232	16	165	6.451613e-02	1	exome+100bp flanks	34834024	63	154	1.808577e-06	4.420965e-06
TCGA-F7-A624-01A-22D-A30E-08	4352	4166	186	3096	4.273897e-02	1	exome+100bp flanks	34834024	1004	2931	2.882240e-05	8.414187e-05
TCGA-H7-7774-01A-21D-2078-08	178	174	4	136	2.247191e-02	0	coding only	34834024	38	131	1.090887e-06	3.760691e-06
TCGA-H7-8501-01A-11D-2394-08	186	175	11	135	5.913978e-02	1	exome+100bp flanks	34834024	36	128	1.033472e-06	3.674568e-06
TCGA-H7-A6C4-01A-11D-A30E-08	61	58	3	45	4.918033e-02	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-H7-A6C5-01A-11D-A30E-08	151	143	8	102	5.298013e-02	1	exome+100bp flanks	34834024	38	90	1.090887e-06	2.583681e-06
TCGA-H7-A76A-01A-51D-A34J-08	103	95	8	69	7.766990e-02	1	exome+100bp flanks	34834024	26	66	7.463967e-07	1.894699e-06
TCGA-HD-7229-01A-11D-2012-08	192	185	7	144	3.645833e-02	1	exome+100bp flanks	34834024	35	135	1.004765e-06	3.875521e-06
TCGA-HD-7753-01A-11D-2078-08	122	113	9	93	7.377049e-02	1	exome+100bp flanks	34834024	18	88	5.167362e-07	2.526266e-06
TCGA-HD-7754-01A-11D-2078-08	83	76	7	53	8.433735e-02	1	exome+100bp flanks	34834024	23	50	6.602740e-07	1.435378e-06
TCGA-HD-7831-01A-11D-2129-08	53	49	4	34	7.547170e-02	1	exome+100bp flanks	34834024	15	33	4.306135e-07	9.473496e-07
TCGA-HD-7832-01A-11D-2129-08	124	115	9	84	7.258065e-02	1	exome+100bp flanks	34834024	29	78	8.325194e-07	2.239190e-06
TCGA-HD-7917-01A-11D-2229-08	130	124	6	91	4.615385e-02	1	exome+100bp flanks	34834024	29	86	8.325194e-07	2.468851e-06
TCGA-HD-8224-01A-11D-2394-08	94	87	7	73	7.446809e-02	1	exome+100bp flanks	34834024	14	70	4.019059e-07	2.009530e-06
TCGA-HD-8314-01A-11D-2394-08	86	83	3	62	3.488372e-02	1	exome+100bp flanks	34834024	20	59	5.741513e-07	1.693746e-06
TCGA-HD-8634-01A-11D-2394-08	89	87	2	66	2.247191e-02	1	exome+100bp flanks	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-HD-8635-01A-11D-2394-08	261	247	14	177	5.363985e-02	1	exome+100bp flanks	34834024	67	168	1.923407e-06	4.822871e-06
TCGA-HD-A4C1-01A-11D-A24D-08	250	239	11	170	4.400000e-02	1	exome+100bp flanks	34834024	67	161	1.923407e-06	4.621918e-06
TCGA-HD-A633-01A-11D-A28R-08	169	162	7	122	4.142012e-02	1	exome+100bp flanks	34834024	39	114	1.119595e-06	3.272662e-06
TCGA-HD-A634-01A-11D-A28R-08	62	56	6	38	9.677419e-02	1	exome+100bp flanks	34834024	17	36	4.880286e-07	1.033472e-06
TCGA-HD-A6HZ-01A-12D-A31L-08	121	110	11	76	9.090909e-02	1	exome+100bp flanks	34834024	34	71	9.760572e-07	2.038237e-06
TCGA-HD-A6I0-01A-11D-A31L-08	99	92	7	72	7.070707e-02	1	exome+100bp flanks	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-HL-7533-01A-11D-2229-08	953	918	35	676	3.672613e-02	1	exome+100bp flanks	34834024	223	634	6.401787e-06	1.820060e-05
TCGA-IQ-7630-01A-11D-2078-08	160	149	11	112	6.875000e-02	1	exome+100bp flanks	34834024	35	106	1.004765e-06	3.043002e-06
TCGA-IQ-7631-01A-11D-2078-08	40	37	3	22	7.500000e-02	1	exome+100bp flanks	34834024	14	19	4.019059e-07	5.454437e-07
TCGA-IQ-7632-01A-11D-2078-08	64	64	0	46	0	1	exome+100bp flanks	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-IQ-A61E-01A-22D-A30E-08	248	238	10	172	4.032258e-02	1	exome+100bp flanks	34834024	64	162	1.837284e-06	4.650625e-06
TCGA-IQ-A61G-01A-11D-A30E-08	181	174	7	129	3.867403e-02	1	exome+100bp flanks	34834024	42	118	1.205718e-06	3.387493e-06
TCGA-IQ-A61H-01A-11D-A30E-08	191	179	12	134	6.282723e-02	1	exome+100bp flanks	34834024	45	124	1.291840e-06	3.559738e-06
TCGA-IQ-A61I-01A-11D-A30E-08	181	171	10	123	5.524862e-02	1	exome+100bp flanks	34834024	44	113	1.263133e-06	3.243955e-06
TCGA-IQ-A61J-01A-11D-A30E-08	70	64	6	48	8.571429e-02	1	exome+100bp flanks	34834024	15	46	4.306135e-07	1.320548e-06
TCGA-IQ-A61K-01A-11D-A30E-08	99	90	9	68	9.090909e-02	1	exome+100bp flanks	34834024	22	65	6.315664e-07	1.865992e-06
TCGA-IQ-A61L-01A-11D-A30E-08	122	118	4	89	3.278689e-02	1	exome+100bp flanks	34834024	24	82	6.889816e-07	2.354020e-06
TCGA-IQ-A61O-01A-11D-A30E-08	68	62	6	42	8.823529e-02	1	exome+100bp flanks	34834024	18	41	5.167362e-07	1.177010e-06
TCGA-IQ-A6SG-01A-12D-A34J-08	131	125	6	93	4.580153e-02	1	exome+100bp flanks	34834024	29	87	8.325194e-07	2.497558e-06
TCGA-IQ-A6SH-01A-12D-A34J-08	110	98	12	69	1.090909e-01	1	exome+100bp flanks	34834024	26	63	7.463967e-07	1.808577e-06
TCGA-KU-A66S-01A-21D-A30E-08	666	631	35	502	5.255255e-02	1	exome+100bp flanks	34834024	121	481	3.473615e-06	1.380834e-05
TCGA-KU-A66T-01A-11D-A30E-08	141	132	9	98	6.382979e-02	1	exome+100bp flanks	34834024	31	95	8.899345e-07	2.727219e-06
TCGA-KU-A6H7-01A-11D-A31L-08	207	200	7	147	3.381643e-02	1	exome+100bp flanks	34834024	49	138	1.406671e-06	3.961644e-06
TCGA-KU-A6H8-01A-21D-A34J-08	40	38	2	31	5.000000e-02	1	exome+100bp flanks	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-MT-A51W-01A-21D-A25Y-08	88	80	8	63	9.090909e-02	1	exome+100bp flanks	34834024	16	61	4.593210e-07	1.751161e-06
TCGA-MT-A51X-01A-11D-A25Y-08	71	64	7	44	9.859155e-02	1	exome+100bp flanks	34834024	19	42	5.454437e-07	1.205718e-06
TCGA-MT-A67A-01A-11D-A30E-08	150	141	9	108	6.000000e-02	1	exome+100bp flanks	34834024	31	99	8.899345e-07	2.842049e-06
TCGA-MT-A67D-01A-31D-A30E-08	146	135	11	100	7.534247e-02	1	exome+100bp flanks	34834024	32	98	9.186421e-07	2.813341e-06
TCGA-MT-A67F-01A-11D-A30E-08	387	367	20	291	5.167959e-02	1	exome+100bp flanks	34834024	72	273	2.066945e-06	7.837165e-06
TCGA-MT-A67G-01A-11D-A30E-08	90	85	5	61	5.555556e-02	1	exome+100bp flanks	34834024	21	59	6.028589e-07	1.693746e-06
TCGA-MT-A7BN-01A-12D-A34J-08	78	73	5	57	6.410256e-02	1	exome+100bp flanks	34834024	15	53	4.306135e-07	1.521501e-06
TCGA-MZ-A5BI-01A-31D-A34J-08	57	49	8	40	1.403509e-01	1	exome+100bp flanks	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-MZ-A6I9-01A-11D-A31L-08	64	61	3	40	4.687500e-02	1	exome+100bp flanks	34834024	19	36	5.454437e-07	1.033472e-06
TCGA-MZ-A7D7-01A-21D-A34J-08	217	213	4	146	1.843318e-02	0	coding only	34834024	59	139	1.693746e-06	3.990352e-06
TCGA-P3-A5Q6-01A-11D-A28R-08	158	150	8	110	5.063291e-02	1	exome+100bp flanks	34834024	38	105	1.090887e-06	3.014294e-06
TCGA-P3-A5QA-01A-11D-A28R-08	95	92	3	73	3.157895e-02	1	exome+100bp flanks	34834024	18	71	5.167362e-07	2.038237e-06
TCGA-P3-A5QE-01A-11D-A28R-08	58	52	6	39	1.034483e-01	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-P3-A5QF-01A-11D-A28R-08	480	450	30	328	6.250000e-02	1	exome+100bp flanks	34834024	116	306	3.330078e-06	8.784515e-06
TCGA-P3-A6SW-01A-11D-A34J-08	125	120	5	90	4.000000e-02	1	exome+100bp flanks	34834024	29	86	8.325194e-07	2.468851e-06
TCGA-P3-A6SX-01A-11D-A34J-08	217	199	18	157	8.294931e-02	1	exome+100bp flanks	34834024	42	148	1.205718e-06	4.248720e-06
TCGA-P3-A6T0-01A-12D-A34J-08	115	107	8	80	6.956522e-02	1	exome+100bp flanks	34834024	27	74	7.751042e-07	2.124360e-06
TCGA-P3-A6T2-01A-11D-A34J-08	82	75	7	48	8.536585e-02	1	exome+100bp flanks	34834024	26	44	7.463967e-07	1.263133e-06
TCGA-P3-A6T3-01A-11D-A34J-08	141	139	2	108	1.418440e-02	0	coding only	34834024	29	100	8.325194e-07	2.870756e-06
TCGA-P3-A6T4-01A-11D-A34J-08	197	191	6	145	3.045685e-02	1	exome+100bp flanks	34834024	45	132	1.291840e-06	3.789399e-06
TCGA-P3-A6T5-01A-11D-A34J-08	306	292	14	203	4.575163e-02	1	exome+100bp flanks	34834024	84	190	2.411435e-06	5.454437e-06
TCGA-P3-A6T6-01A-11D-A34J-08	160	151	9	120	5.625000e-02	1	exome+100bp flanks	34834024	29	118	8.325194e-07	3.387493e-06
TCGA-P3-A6T7-01A-11D-A34J-08	178	166	12	124	6.741573e-02	1	exome+100bp flanks	34834024	36	121	1.033472e-06	3.473615e-06
TCGA-P3-A6T8-01A-11D-A34J-08	107	102	5	82	4.672897e-02	1	exome+100bp flanks	34834024	19	75	5.454437e-07	2.153067e-06
TCGA-QK-A64Z-01A-11D-A30E-08	112	108	4	71	3.571429e-02	1	exome+100bp flanks	34834024	32	67	9.186421e-07	1.923407e-06
TCGA-QK-A652-01A-11D-A30E-08	63	59	4	49	6.349206e-02	1	exome+100bp flanks	34834024	9	45	2.583681e-07	1.291840e-06
TCGA-QK-A6IF-01A-11D-A31L-08	39	34	5	25	1.282051e-01	1	exome+100bp flanks	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-QK-A6IG-01A-11D-A31L-08	145	140	5	113	3.448276e-02	1	exome+100bp flanks	34834024	25	105	7.176891e-07	3.014294e-06
TCGA-QK-A6IH-01A-11D-A31L-08	84	83	1	65	1.190476e-02	1	exome+100bp flanks	34834024	18	63	5.167362e-07	1.808577e-06
TCGA-QK-A6II-01A-11D-A31L-08	211	200	11	148	5.213270e-02	1	exome+100bp flanks	34834024	47	138	1.349256e-06	3.961644e-06
TCGA-QK-A6IJ-01A-11D-A31L-08	103	98	5	71	4.854369e-02	1	exome+100bp flanks	34834024	25	69	7.176891e-07	1.980822e-06
TCGA-QK-A6V9-01A-11D-A34J-08	110	103	7	74	6.363636e-02	1	exome+100bp flanks	34834024	29	67	8.325194e-07	1.923407e-06
TCGA-QK-A6VB-01A-12D-A34J-08	617	577	40	456	6.482982e-02	1	exome+100bp flanks	34834024	117	421	3.358785e-06	1.208588e-05
TCGA-QK-A6VC-01A-23D-A34J-08	258	249	9	191	3.488372e-02	1	exome+100bp flanks	34834024	57	180	1.636331e-06	5.167362e-06
TCGA-RS-A6TO-01A-32D-A34J-08	225	214	11	155	4.888889e-02	1	exome+100bp flanks	34834024	57	148	1.636331e-06	4.248720e-06
TCGA-RS-A6TP-01A-12D-A34J-08	174	158	16	114	9.195402e-02	1	exome+100bp flanks	34834024	40	106	1.148303e-06	3.043002e-06
TCGA-T2-A6WX-01A-12D-A34J-08	247	233	14	175	5.668016e-02	1	exome+100bp flanks	34834024	54	166	1.550208e-06	4.765456e-06
TCGA-T2-A6WZ-01A-21D-A34J-08	132	127	5	92	3.787879e-02	1	exome+100bp flanks	34834024	33	89	9.473496e-07	2.554973e-06
TCGA-T2-A6X0-01A-11D-A34J-08	84	77	7	54	8.333333e-02	1	exome+100bp flanks	34834024	22	53	6.315664e-07	1.521501e-06
TCGA-T2-A6X2-01A-12D-A34J-08	441	425	16	321	3.628118e-02	1	exome+100bp flanks	34834024	101	308	2.899464e-06	8.841930e-06
TCGA-TN-A7HI-01A-11D-A34J-08	78	73	5	60	6.410256e-02	1	exome+100bp flanks	34834024	10	57	2.870756e-07	1.636331e-06
TCGA-TN-A7HJ-01A-12D-A34J-08	150	140	10	110	6.666667e-02	1	exome+100bp flanks	34834024	29	106	8.325194e-07	3.043002e-06
TCGA-TN-A7HL-01A-11D-A34J-08	770	733	37	534	4.805195e-02	1	exome+100bp flanks	34834024	193	499	5.540560e-06	1.432507e-05
TCGA-UF-A718-01A-22D-A34J-08	87	78	9	62	1.034483e-01	1	exome+100bp flanks	34834024	15	55	4.306135e-07	1.578916e-06
TCGA-UF-A719-01A-12D-A34J-08	160	152	8	120	5.000000e-02	1	exome+100bp flanks	34834024	29	114	8.325194e-07	3.272662e-06
TCGA-UF-A71A-01A-22D-A34J-08	254	239	15	175	5.905512e-02	1	exome+100bp flanks	34834024	59	166	1.693746e-06	4.765456e-06
TCGA-UF-A71B-01A-12D-A34J-08	197	188	9	132	4.568528e-02	1	exome+100bp flanks	34834024	53	118	1.521501e-06	3.387493e-06
TCGA-UF-A71D-01A-12D-A34J-08	560	532	28	392	5.000000e-02	1	exome+100bp flanks	34834024	130	373	3.731983e-06	1.070792e-05
TCGA-UF-A71E-01A-31D-A34J-08	205	194	11	136	5.365854e-02	1	exome+100bp flanks	34834024	54	129	1.550208e-06	3.703276e-06
TCGA-UF-A7J9-01A-12D-A34J-08	311	297	14	224	4.501608e-02	1	exome+100bp flanks	34834024	68	215	1.952114e-06	6.172126e-06
TCGA-UF-A7JA-01A-12D-A34J-08	298	284	14	222	4.697987e-02	1	exome+100bp flanks	34834024	58	211	1.665039e-06	6.057296e-06
TCGA-UF-A7JC-01A-21D-A34J-08	69	64	5	51	7.246377e-02	1	exome+100bp flanks	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-UF-A7JD-01A-11D-A34J-08	146	135	11	102	7.534247e-02	1	exome+100bp flanks	34834024	31	97	8.899345e-07	2.784634e-06
TCGA-UF-A7JF-01A-11D-A34J-08	142	124	18	92	1.267606e-01	1	exome+100bp flanks	34834024	29	88	8.325194e-07	2.526266e-06
TCGA-UF-A7JH-01A-21D-A34J-08	101	92	9	68	8.910891e-02	1	exome+100bp flanks	34834024	22	62	6.315664e-07	1.779869e-06
TCGA-UF-A7JJ-01A-11D-A34J-08	126	116	10	94	7.936508e-02	1	exome+100bp flanks	34834024	22	88	6.315664e-07	2.526266e-06
TCGA-UF-A7JK-01A-11D-A34J-08	146	139	7	94	4.794521e-02	1	exome+100bp flanks	34834024	43	93	1.234425e-06	2.669804e-06
TCGA-UF-A7JO-01A-11D-A34J-08	224	215	9	156	4.017857e-02	1	exome+100bp flanks	34834024	57	150	1.636331e-06	4.306135e-06
TCGA-UF-A7JS-01A-11D-A34J-08	91	82	9	59	9.890110e-02	1	exome+100bp flanks	34834024	22	57	6.315664e-07	1.636331e-06
TCGA-UF-A7JT-01A-11D-A34J-08	245	233	12	170	4.897959e-02	1	exome+100bp flanks	34834024	61	159	1.751161e-06	4.564503e-06
TCGA-UF-A7JV-01A-11D-A34J-08	109	103	6	76	5.504587e-02	1	exome+100bp flanks	34834024	27	72	7.751042e-07	2.066945e-06
TCGA-UP-A6WW-01A-12D-A34J-08	52	47	5	36	9.615385e-02	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-WA-A7GZ-01A-11D-A34J-08	269	251	18	188	6.691450e-02	1	exome+100bp flanks	34834024	59	174	1.693746e-06	4.995116e-06
TCGA-WA-A7H4-01A-21D-A34J-08	108	100	8	81	7.407407e-02	1	exome+100bp flanks	34834024	19	80	5.454437e-07	2.296605e-06