name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-04-1331-01A-01W-0486-08	66	66	0	56	0	1	exome+100bp flanks	34834024	9	53	2.583681e-07	1.521501e-06
TCGA-04-1332-01A-01W-0488-09	35	30	5	23	1.428571e-01	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-04-1336-01A-01W-0488-09	68	63	5	51	7.352941e-02	1	exome+100bp flanks	34834024	12	48	3.444908e-07	1.377963e-06
TCGA-04-1337-01A-01W-0484-10	59	58	1	53	1.694915e-02	1	exome+100bp flanks	34834024	4	52	1.148303e-07	1.492793e-06
TCGA-04-1338-01A-01W-0484-10	139	137	2	113	1.438849e-02	0	coding only	34834024	23	104	6.602740e-07	2.985587e-06
TCGA-04-1342-01A-01W-0486-08	30	30	0	21	0	1	exome+100bp flanks	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-04-1343-01A-01W-0488-09	71	64	7	48	9.859155e-02	1	exome+100bp flanks	34834024	15	43	4.306135e-07	1.234425e-06
TCGA-04-1346-01A-01W-0488-09	51	45	6	33	1.176471e-01	1	exome+100bp flanks	34834024	12	30	3.444908e-07	8.612269e-07
TCGA-04-1347-01A-01W-0488-09	130	119	11	93	8.461538e-02	1	exome+100bp flanks	34834024	25	90	7.176891e-07	2.583681e-06
TCGA-04-1348-01A-01W-0494-09	45	37	8	33	1.777778e-01	1	exome+100bp flanks	34834024	4	31	1.148303e-07	8.899345e-07
TCGA-04-1349-01A-01W-0494-09	36	34	2	28	5.555556e-02	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-04-1350-01A-01W-0490-10	34	34	0	32	0	1	exome+100bp flanks	34834024	1	30	2.870756e-08	8.612269e-07
TCGA-04-1351-01A-01W-0490-10	0	0	0	0	NaN	1	exome+100bp flanks	34834024	0	0	0	0
TCGA-04-1353-01A-01D-1526-09	30	25	5	15	1.666667e-01	1	exome+100bp flanks	34834024	10	13	2.870756e-07	3.731983e-07
TCGA-04-1356-01A-01W-0492-08	51	50	1	37	1.960784e-02	1	exome+100bp flanks	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-04-1357-01A-01W-0492-08	41	40	1	31	2.439024e-02	1	exome+100bp flanks	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-04-1361-01A-01W-0494-09	68	62	6	49	8.823529e-02	1	exome+100bp flanks	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-04-1362-01A-01W-0494-09	76	69	7	56	9.210526e-02	1	exome+100bp flanks	34834024	12	55	3.444908e-07	1.578916e-06
TCGA-04-1364-01A-01W-0490-10	36	36	0	31	0	1	exome+100bp flanks	34834024	3	30	8.612269e-08	8.612269e-07
TCGA-04-1365-01A-01W-0490-10	32	32	0	31	0	1	exome+100bp flanks	34834024	1	30	2.870756e-08	8.612269e-07
TCGA-04-1367-01A-01W-0492-08	81	78	3	62	3.703704e-02	1	exome+100bp flanks	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-04-1369-01A-02D-1526-09	85	79	6	59	7.058824e-02	1	exome+100bp flanks	34834024	18	57	5.167362e-07	1.636331e-06
TCGA-04-1514-01A-01W-0552-10	30	30	0	24	0	1	exome+100bp flanks	34834024	6	23	1.722454e-07	6.602740e-07
TCGA-04-1516-01A-01D-1526-09	74	64	10	55	1.351351e-01	1	exome+100bp flanks	34834024	8	53	2.296605e-07	1.521501e-06
TCGA-04-1517-01A-01W-0615-10	19	19	0	16	0	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-04-1519-01A-01W-0615-10	3	3	0	2	0	1	exome+100bp flanks	34834024	1	1	2.870756e-08	2.870756e-08
TCGA-04-1525-01A-01W-0615-10	20	19	1	16	5.000000e-02	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-04-1530-01A-02W-0552-10	65	64	1	50	1.538462e-02	1	exome+100bp flanks	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-04-1542-01A-01W-0553-09	71	64	7	53	9.859155e-02	1	exome+100bp flanks	34834024	10	48	2.870756e-07	1.377963e-06
TCGA-04-1638-01A-01W-0639-09	62	50	12	38	1.935484e-01	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-04-1644-01B-01D-1526-09	44	40	4	36	9.090909e-02	1	exome+100bp flanks	34834024	4	36	1.148303e-07	1.033472e-06
TCGA-04-1646-01A-01W-0639-09	33	29	4	23	1.212121e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-04-1648-01A-01W-0639-09	49	40	9	26	1.836735e-01	1	exome+100bp flanks	34834024	13	24	3.731983e-07	6.889816e-07
TCGA-04-1649-01A-01W-0639-09	70	61	9	46	1.285714e-01	1	exome+100bp flanks	34834024	12	43	3.444908e-07	1.234425e-06
TCGA-04-1651-01A-01W-0639-09	66	56	10	40	1.515152e-01	1	exome+100bp flanks	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-04-1652-01A-01W-0639-09	83	72	11	43	1.325301e-01	1	exome+100bp flanks	34834024	27	40	7.751042e-07	1.148303e-06
TCGA-04-1655-01A-01W-0633-09	59	54	5	42	8.474576e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-09-0364-01A-02W-0370-10	13	13	0	13	0	1	exome+100bp flanks	34834024	0	13	0	3.731983e-07
TCGA-09-0366-01A-01W-0372-09	43	40	3	32	6.976744e-02	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-09-0369-01A-01W-0372-09	69	60	9	52	1.304348e-01	1	exome+100bp flanks	34834024	7	47	2.009530e-07	1.349256e-06
TCGA-09-1659-01B-01W-0615-10	17	17	0	14	0	1	exome+100bp flanks	34834024	3	14	8.612269e-08	4.019059e-07
TCGA-09-1661-01B-01W-0615-10	38	36	2	32	5.263158e-02	1	exome+100bp flanks	34834024	4	31	1.148303e-07	8.899345e-07
TCGA-09-1662-01A-01W-0615-10	34	34	0	27	0	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-09-1664-01A-01W-0639-09	19	16	3	11	1.578947e-01	1	exome+100bp flanks	34834024	5	11	1.435378e-07	3.157832e-07
TCGA-09-1665-01B-01W-0615-10	95	92	3	64	3.157895e-02	1	exome+100bp flanks	34834024	28	60	8.038118e-07	1.722454e-06
TCGA-09-1666-01A-01W-0615-10	18	18	0	16	0	1	exome+100bp flanks	34834024	2	14	5.741513e-08	4.019059e-07
TCGA-09-1669-01A-01W-0615-10	50	50	0	40	0	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-09-1670-01A-01W-0633-09	33	28	5	23	1.515152e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-09-1672-01A-01W-0633-09	23	20	3	16	1.304348e-01	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-09-1673-01A-01W-0633-09	47	42	5	34	1.063830e-01	1	exome+100bp flanks	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-09-1674-01A-01W-0633-09	133	122	11	98	8.270677e-02	1	exome+100bp flanks	34834024	22	91	6.315664e-07	2.612388e-06
TCGA-09-1675-01B-01W-0633-09	70	63	7	49	1.000000e-01	1	exome+100bp flanks	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-09-2044-01B-01W-0799-08	89	87	2	70	2.247191e-02	1	exome+100bp flanks	34834024	17	65	4.880286e-07	1.865992e-06
TCGA-09-2045-01A-01W-0799-08	34	34	0	28	0	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-09-2049-01D-01W-0799-08	119	119	0	95	0	0	coding only	34834024	23	90	6.602740e-07	2.583681e-06
TCGA-09-2050-01A-01W-0799-08	111	110	1	85	9.009009e-03	0	coding only	34834024	24	79	6.889816e-07	2.267898e-06
TCGA-09-2051-01A-01W-0799-08	4	4	0	4	0	1	exome+100bp flanks	34834024	0	4	0	1.148303e-07
TCGA-09-2053-01C-01W-0722-08	36	36	0	25	0	1	exome+100bp flanks	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-09-2056-01B-01W-0722-08	71	70	1	61	1.408451e-02	1	exome+100bp flanks	34834024	9	58	2.583681e-07	1.665039e-06
TCGA-10-0926-01A-01W-0420-08	39	39	0	29	0	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-10-0927-01A-02W-0419-10	26	25	1	19	3.846154e-02	1	exome+100bp flanks	34834024	6	19	1.722454e-07	5.454437e-07
TCGA-10-0928-01A-02W-0419-10	43	43	0	34	0	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-10-0930-01A-02W-0421-09	173	160	13	128	7.514451e-02	1	exome+100bp flanks	34834024	30	117	8.612269e-07	3.358785e-06
TCGA-10-0931-01A-01W-0420-08	26	26	0	21	0	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-10-0933-01A-01W-0421-09	45	40	5	32	1.111111e-01	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-10-0934-01A-02W-0420-08	17	16	1	12	5.882353e-02	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-10-0935-01A-03W-0421-09	49	47	2	38	4.081633e-02	1	exome+100bp flanks	34834024	8	36	2.296605e-07	1.033472e-06
TCGA-10-0937-01A-02W-0419-10	40	40	0	31	0	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-10-0938-01A-02W-0419-10	54	53	1	40	1.851852e-02	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-13-0714-01A-01W-0370-10	67	67	0	59	0	1	exome+100bp flanks	34834024	7	56	2.009530e-07	1.607624e-06
TCGA-13-0717-01A-01W-0370-10	35	34	1	30	2.857143e-02	1	exome+100bp flanks	34834024	3	29	8.612269e-08	8.325194e-07
TCGA-13-0720-01A-01W-0370-10	55	55	0	43	0	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-13-0723-01A-02W-0372-09	50	41	9	32	1.800000e-01	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-13-0724-01A-01W-0372-09	48	44	4	34	8.333333e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-13-0726-01A-01W-0372-09	71	68	3	57	4.225352e-02	1	exome+100bp flanks	34834024	11	54	3.157832e-07	1.550208e-06
TCGA-13-0727-01A-01W-0370-10	28	27	1	19	3.571429e-02	1	exome+100bp flanks	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-13-0730-01A-01W-0370-10	37	37	0	27	0	1	exome+100bp flanks	34834024	10	24	2.870756e-07	6.889816e-07
TCGA-13-0751-01A-01D-0446-08	31	30	1	19	3.225806e-02	1	exome+100bp flanks	34834024	10	17	2.870756e-07	4.880286e-07
TCGA-13-0755-01A-01W-0372-09	100	96	4	73	4.000000e-02	1	exome+100bp flanks	34834024	21	70	6.028589e-07	2.009530e-06
TCGA-13-0760-01A-01W-0372-09	201	183	18	146	8.955224e-02	1	exome+100bp flanks	34834024	34	137	9.760572e-07	3.932936e-06
TCGA-13-0761-01A-01W-0370-10	54	53	1	44	1.851852e-02	1	exome+100bp flanks	34834024	9	42	2.583681e-07	1.205718e-06
TCGA-13-0762-01A-01W-0370-10	66	66	0	58	0	1	exome+100bp flanks	34834024	8	56	2.296605e-07	1.607624e-06
TCGA-13-0765-01A-01W-0372-09	30	25	5	19	1.666667e-01	1	exome+100bp flanks	34834024	6	19	1.722454e-07	5.454437e-07
TCGA-13-0791-01A-01W-0372-09	82	71	11	55	1.341463e-01	1	exome+100bp flanks	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-13-0792-01A-01W-0370-10	65	63	2	57	3.076923e-02	1	exome+100bp flanks	34834024	6	56	1.722454e-07	1.607624e-06
TCGA-13-0793-01A-01W-0370-10	64	62	2	47	3.125000e-02	1	exome+100bp flanks	34834024	15	44	4.306135e-07	1.263133e-06
TCGA-13-0795-01A-01W-0372-09	72	70	2	54	2.777778e-02	1	exome+100bp flanks	34834024	15	51	4.306135e-07	1.464086e-06
TCGA-13-0800-01A-01W-0372-09	55	44	11	33	2.000000e-01	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-13-0801-01A-01W-0370-10	19	19	0	19	0	1	exome+100bp flanks	34834024	0	18	0	5.167362e-07
TCGA-13-0802-01A-01W-0370-10	8	8	0	8	0	1	exome+100bp flanks	34834024	0	8	0	2.296605e-07
TCGA-13-0804-01A-01W-0372-09	43	37	6	28	1.395349e-01	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-13-0807-01B-02W-0421-09	64	58	6	50	9.375000e-02	1	exome+100bp flanks	34834024	7	48	2.009530e-07	1.377963e-06
TCGA-13-0883-01A-02W-0420-08	56	56	0	47	0	1	exome+100bp flanks	34834024	9	43	2.583681e-07	1.234425e-06
TCGA-13-0884-01B-01W-0494-09	99	89	10	74	1.010101e-01	1	exome+100bp flanks	34834024	15	69	4.306135e-07	1.980822e-06
TCGA-13-0885-01A-02W-0421-09	178	163	15	122	8.426966e-02	1	exome+100bp flanks	34834024	36	115	1.033472e-06	3.301370e-06
TCGA-13-0886-01A-01W-0420-08	49	49	0	37	0	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-13-0887-01A-01W-0421-09	119	105	14	78	1.176471e-01	1	exome+100bp flanks	34834024	26	75	7.463967e-07	2.153067e-06
TCGA-13-0889-01A-01W-0419-10	27	27	0	25	0	1	exome+100bp flanks	34834024	2	21	5.741513e-08	6.028589e-07
TCGA-13-0890-01A-01W-0421-09	70	59	11	48	1.571429e-01	1	exome+100bp flanks	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-13-0891-01A-01W-0420-08	24	23	1	19	4.166667e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-13-0893-01B-01W-0494-09	83	74	9	57	1.084337e-01	1	exome+100bp flanks	34834024	17	56	4.880286e-07	1.607624e-06
TCGA-13-0894-01B-01W-0494-09	62	56	6	47	9.677419e-02	1	exome+100bp flanks	34834024	8	47	2.296605e-07	1.349256e-06
TCGA-13-0897-01A-01W-0421-09	55	53	2	40	3.636364e-02	1	exome+100bp flanks	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-13-0899-01A-01W-0420-08	28	26	2	20	7.142857e-02	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-13-0900-01B-01W-0490-10	99	98	1	88	1.010101e-02	1	exome+100bp flanks	34834024	10	85	2.870756e-07	2.440143e-06
TCGA-13-0901-01B-01W-0490-10	3	3	0	3	0	1	exome+100bp flanks	34834024	0	3	0	8.612269e-08
TCGA-13-0903-01A-01W-0421-09	66	60	6	50	9.090909e-02	1	exome+100bp flanks	34834024	10	48	2.870756e-07	1.377963e-06
TCGA-13-0904-01A-02W-0420-08	100	100	0	73	0	0	coding only	34834024	27	68	7.751042e-07	1.952114e-06
TCGA-13-0905-01B-01W-0492-08	61	60	1	42	1.639344e-02	1	exome+100bp flanks	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-13-0906-01A-01W-0419-10	97	95	2	82	2.061856e-02	1	exome+100bp flanks	34834024	13	78	3.731983e-07	2.239190e-06
TCGA-13-0910-01A-01W-0421-09	31	27	4	21	1.290323e-01	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-13-0911-01A-01W-0420-08	21	21	0	17	0	1	exome+100bp flanks	34834024	4	17	1.148303e-07	4.880286e-07
TCGA-13-0912-01A-01W-0421-09	38	35	3	25	7.894737e-02	1	exome+100bp flanks	34834024	10	22	2.870756e-07	6.315664e-07
TCGA-13-0913-01A-01W-0420-08	81	81	0	63	0	1	exome+100bp flanks	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-13-0916-01A-01W-0420-08	67	67	0	55	0	1	exome+100bp flanks	34834024	12	53	3.444908e-07	1.521501e-06
TCGA-13-0919-01A-01W-0419-10	59	58	1	47	1.694915e-02	1	exome+100bp flanks	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-13-0920-01A-01W-0421-09	129	114	15	85	1.162791e-01	1	exome+100bp flanks	34834024	29	81	8.325194e-07	2.325313e-06
TCGA-13-0923-01A-01W-0420-08	117	116	1	100	8.547009e-03	0	coding only	34834024	16	96	4.593210e-07	2.755926e-06
TCGA-13-0924-01A-01W-0421-09	68	65	3	55	4.411765e-02	1	exome+100bp flanks	34834024	9	55	2.583681e-07	1.578916e-06
TCGA-13-1403-01A-01W-0494-09	53	52	1	45	1.886792e-02	1	exome+100bp flanks	34834024	7	37	2.009530e-07	1.062180e-06
TCGA-13-1404-01A-01W-0494-09	62	53	9	44	1.451613e-01	1	exome+100bp flanks	34834024	6	42	1.722454e-07	1.205718e-06
TCGA-13-1405-01A-01W-0494-09	38	33	5	25	1.315789e-01	1	exome+100bp flanks	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-13-1407-01A-01W-0490-10	30	29	1	21	3.333333e-02	1	exome+100bp flanks	34834024	8	20	2.296605e-07	5.741513e-07
TCGA-13-1408-01A-01W-0490-10	80	79	1	75	1.250000e-02	1	exome+100bp flanks	34834024	4	73	1.148303e-07	2.095652e-06
TCGA-13-1409-01A-01W-0492-08	49	49	0	37	0	1	exome+100bp flanks	34834024	12	36	3.444908e-07	1.033472e-06
TCGA-13-1410-01A-01W-0492-08	58	58	0	48	0	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-13-1411-01A-01W-0494-09	54	51	3	36	5.555556e-02	1	exome+100bp flanks	34834024	15	35	4.306135e-07	1.004765e-06
TCGA-13-1412-01A-01W-0494-09	39	38	1	28	2.564103e-02	1	exome+100bp flanks	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-13-1477-01A-01D-0472-08	5	5	0	4	0	1	exome+100bp flanks	34834024	1	4	2.870756e-08	1.148303e-07
TCGA-13-1481-01A-01W-0549-09	116	106	10	84	8.620690e-02	1	exome+100bp flanks	34834024	20	79	5.741513e-07	2.267898e-06
TCGA-13-1482-01A-01W-0549-09	70	60	10	47	1.428571e-01	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-13-1483-01A-01W-0549-09	67	55	12	46	1.791045e-01	1	exome+100bp flanks	34834024	9	43	2.583681e-07	1.234425e-06
TCGA-13-1484-01A-01W-0545-08	37	35	2	26	5.405405e-02	1	exome+100bp flanks	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-13-1487-01A-01D-0472-08	36	36	0	25	0	1	exome+100bp flanks	34834024	10	23	2.870756e-07	6.602740e-07
TCGA-13-1488-01A-01W-0549-09	130	117	13	92	1.000000e-01	1	exome+100bp flanks	34834024	24	87	6.889816e-07	2.497558e-06
TCGA-13-1489-01A-01W-0549-09	60	56	4	43	6.666667e-02	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-13-1491-01A-01W-0549-09	47	42	5	31	1.063830e-01	1	exome+100bp flanks	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-13-1492-01A-01D-0472-08	39	39	0	28	0	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-13-1494-01A-01W-0545-08	11	10	1	7	9.090909e-02	1	exome+100bp flanks	34834024	3	7	8.612269e-08	2.009530e-07
TCGA-13-1495-01A-01W-0545-08	35	34	1	24	2.857143e-02	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-13-1496-01A-01W-0545-08	59	58	1	43	1.694915e-02	1	exome+100bp flanks	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-13-1497-01A-01W-0549-09	147	141	6	111	4.081633e-02	1	exome+100bp flanks	34834024	29	101	8.325194e-07	2.899464e-06
TCGA-13-1498-01A-01W-0549-09	123	118	5	85	4.065041e-02	1	exome+100bp flanks	34834024	32	83	9.186421e-07	2.382728e-06
TCGA-13-1499-01A-01W-0549-09	75	66	9	49	1.200000e-01	1	exome+100bp flanks	34834024	17	45	4.880286e-07	1.291840e-06
TCGA-13-1501-01A-01W-0545-08	68	66	2	56	2.941176e-02	1	exome+100bp flanks	34834024	10	56	2.870756e-07	1.607624e-06
TCGA-13-1504-01A-01W-0545-08	34	34	0	27	0	1	exome+100bp flanks	34834024	6	26	1.722454e-07	7.463967e-07
TCGA-13-1505-01A-01D-0472-08	50	48	2	35	4.000000e-02	1	exome+100bp flanks	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-13-1506-01A-01W-0549-09	27	22	5	20	1.851852e-01	1	exome+100bp flanks	34834024	2	18	5.741513e-08	5.167362e-07
TCGA-13-1507-01A-01W-0549-09	95	90	5	72	5.263158e-02	1	exome+100bp flanks	34834024	17	69	4.880286e-07	1.980822e-06
TCGA-13-1509-01A-01W-0549-09	99	87	12	70	1.212121e-01	1	exome+100bp flanks	34834024	17	67	4.880286e-07	1.923407e-06
TCGA-13-1510-01A-02D-0472-08	22	22	0	17	0	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-13-1512-01A-01W-0545-08	55	53	2	41	3.636364e-02	1	exome+100bp flanks	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-13-2057-01A-02D-1526-09	164	144	20	110	1.219512e-01	1	exome+100bp flanks	34834024	33	104	9.473496e-07	2.985587e-06
TCGA-13-2059-01A-01D-1526-09	85	80	5	60	5.882353e-02	1	exome+100bp flanks	34834024	20	57	5.741513e-07	1.636331e-06
TCGA-13-2060-01A-01W-0799-08	42	42	0	34	0	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-13-2061-01A-01D-1526-09	98	89	9	68	9.183673e-02	1	exome+100bp flanks	34834024	20	64	5.741513e-07	1.837284e-06
TCGA-13-2065-01A-01D-1526-09	61	53	8	39	1.311475e-01	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-13-2066-01A-01D-1526-09	60	49	11	41	1.833333e-01	1	exome+100bp flanks	34834024	8	40	2.296605e-07	1.148303e-06
TCGA-13-2071-01A-02D-1526-09	61	54	7	40	1.147541e-01	1	exome+100bp flanks	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-20-0987-01A-02W-0486-08	22	22	0	15	0	1	exome+100bp flanks	34834024	7	15	2.009530e-07	4.306135e-07
TCGA-20-0990-01A-01W-0486-08	70	67	3	56	4.285714e-02	1	exome+100bp flanks	34834024	11	54	3.157832e-07	1.550208e-06
TCGA-20-0991-01A-03D-0428-08	67	67	0	46	0	1	exome+100bp flanks	34834024	19	45	5.454437e-07	1.291840e-06
TCGA-20-1682-01A-01W-0633-09	89	80	9	65	1.011236e-01	1	exome+100bp flanks	34834024	15	63	4.306135e-07	1.808577e-06
TCGA-20-1683-01A-01W-0633-09	94	80	14	60	1.489362e-01	1	exome+100bp flanks	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-20-1684-01A-01W-0633-09	43	35	8	25	1.860465e-01	1	exome+100bp flanks	34834024	10	23	2.870756e-07	6.602740e-07
TCGA-20-1685-01A-01W-0633-09	70	60	10	44	1.428571e-01	1	exome+100bp flanks	34834024	16	42	4.593210e-07	1.205718e-06
TCGA-20-1686-01A-01W-0633-09	87	80	7	62	8.045977e-02	1	exome+100bp flanks	34834024	17	59	4.880286e-07	1.693746e-06
TCGA-20-1687-01A-01W-0633-09	82	72	10	52	1.219512e-01	1	exome+100bp flanks	34834024	18	48	5.167362e-07	1.377963e-06
TCGA-23-1021-01B-01W-0488-09	92	82	10	61	1.086957e-01	1	exome+100bp flanks	34834024	20	56	5.741513e-07	1.607624e-06
TCGA-23-1022-01A-02W-0488-09	208	189	19	155	9.134615e-02	1	exome+100bp flanks	34834024	30	144	8.612269e-07	4.133889e-06
TCGA-23-1023-01A-03W-0484-10	41	38	3	29	7.317073e-02	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-23-1024-01A-02W-0484-10	38	37	1	28	2.631579e-02	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-23-1026-01B-01W-0484-10	28	28	0	24	0	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-23-1027-01A-02W-0486-08	37	35	2	31	5.405405e-02	1	exome+100bp flanks	34834024	3	28	8.612269e-08	8.038118e-07
TCGA-23-1028-01A-01W-0484-10	50	49	1	39	2.000000e-02	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-23-1029-01B-01W-0639-09	88	82	6	60	6.818182e-02	1	exome+100bp flanks	34834024	21	58	6.028589e-07	1.665039e-06
TCGA-23-1030-01A-02W-0486-08	34	32	2	29	5.882353e-02	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-23-1031-01A-01W-0486-08	84	81	3	62	3.571429e-02	1	exome+100bp flanks	34834024	18	62	5.167362e-07	1.779869e-06
TCGA-23-1032-01A-02W-0486-08	69	68	1	52	1.449275e-02	1	exome+100bp flanks	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-23-1107-01A-01W-0484-10	7	7	0	7	0	1	exome+100bp flanks	34834024	0	7	0	2.009530e-07
TCGA-23-1109-01A-01W-0484-10	7	7	0	7	0	1	exome+100bp flanks	34834024	0	7	0	2.009530e-07
TCGA-23-1110-01A-01D-0428-08	101	100	1	81	9.900990e-03	0	coding only	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-23-1111-01A-01W-0639-09	62	52	10	40	1.612903e-01	1	exome+100bp flanks	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-23-1114-01B-01W-0633-09	115	106	9	81	7.826087e-02	1	exome+100bp flanks	34834024	24	74	6.889816e-07	2.124360e-06
TCGA-23-1116-01A-01W-0486-08	12	12	0	10	0	1	exome+100bp flanks	34834024	2	10	5.741513e-08	2.870756e-07
TCGA-23-1117-01A-02W-0488-09	114	102	12	73	1.052632e-01	1	exome+100bp flanks	34834024	29	71	8.325194e-07	2.038237e-06
TCGA-23-1118-01A-01W-0488-09	73	68	5	59	6.849315e-02	1	exome+100bp flanks	34834024	8	58	2.296605e-07	1.665039e-06
TCGA-23-1119-01A-02W-0484-10	15	15	0	15	0	1	exome+100bp flanks	34834024	0	15	0	4.306135e-07
TCGA-23-1120-01A-02W-0484-10	111	108	3	98	2.702703e-02	0	coding only	34834024	10	91	2.870756e-07	2.612388e-06
TCGA-23-1122-01A-01W-0486-08	89	88	1	69	1.123596e-02	1	exome+100bp flanks	34834024	18	62	5.167362e-07	1.779869e-06
TCGA-23-1123-01A-01W-0488-09	95	85	10	71	1.052632e-01	1	exome+100bp flanks	34834024	12	64	3.444908e-07	1.837284e-06
TCGA-23-1124-01A-01W-0488-09	162	143	19	119	1.172840e-01	1	exome+100bp flanks	34834024	20	113	5.741513e-07	3.243955e-06
TCGA-23-1809-01A-01W-0633-09	67	56	11	45	1.641791e-01	1	exome+100bp flanks	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-23-2072-01A-01W-0722-08	50	50	0	39	0	1	exome+100bp flanks	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-23-2077-01A-01W-0722-08	55	54	1	42	1.818182e-02	1	exome+100bp flanks	34834024	11	40	3.157832e-07	1.148303e-06
TCGA-23-2078-01A-01W-0722-08	58	58	0	48	0	1	exome+100bp flanks	34834024	10	45	2.870756e-07	1.291840e-06
TCGA-23-2079-01A-01W-0722-08	48	48	0	40	0	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-23-2081-01A-01W-0722-08	44	42	2	32	4.545455e-02	1	exome+100bp flanks	34834024	10	31	2.870756e-07	8.899345e-07
TCGA-23-2641-01A-01D-1526-09	100	84	16	60	1.600000e-01	1	exome+100bp flanks	34834024	23	56	6.602740e-07	1.607624e-06
TCGA-23-2643-01A-01D-1526-09	48	37	11	30	2.291667e-01	1	exome+100bp flanks	34834024	6	30	1.722454e-07	8.612269e-07
TCGA-23-2645-01A-01W-1091-09	139	126	13	92	9.352518e-02	1	exome+100bp flanks	34834024	32	85	9.186421e-07	2.440143e-06
TCGA-23-2647-01A-01D-1526-09	59	55	4	42	6.779661e-02	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-23-2649-01A-01D-1526-09	132	121	11	98	8.333333e-02	1	exome+100bp flanks	34834024	22	95	6.315664e-07	2.727219e-06
TCGA-24-0966-01A-01W-0977-09	40	35	5	29	1.250000e-01	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-24-0968-01A-01W-0484-10	20	20	0	17	0	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-24-0970-01B-01W-0486-08	25	25	0	19	0	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-24-0975-01B-02W-0486-08	18	18	0	14	0	1	exome+100bp flanks	34834024	4	12	1.148303e-07	3.444908e-07
TCGA-24-0979-01A-01W-0486-08	86	86	0	69	0	1	exome+100bp flanks	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-24-0980-01A-01W-0421-09	42	35	7	29	1.666667e-01	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-24-0982-01A-01W-0488-09	55	46	9	33	1.636364e-01	1	exome+100bp flanks	34834024	13	32	3.731983e-07	9.186421e-07
TCGA-24-1103-01A-01W-0488-09	84	77	7	56	8.333333e-02	1	exome+100bp flanks	34834024	20	53	5.741513e-07	1.521501e-06
TCGA-24-1104-01A-01W-0488-09	68	60	8	44	1.176471e-01	1	exome+100bp flanks	34834024	14	43	4.019059e-07	1.234425e-06
TCGA-24-1105-01A-01W-0484-10	21	21	0	19	0	1	exome+100bp flanks	34834024	2	19	5.741513e-08	5.454437e-07
TCGA-24-1413-01A-01W-0494-09	43	35	8	29	1.860465e-01	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-24-1416-01A-01W-0549-09	17	16	1	11	5.882353e-02	1	exome+100bp flanks	34834024	5	11	1.435378e-07	3.157832e-07
TCGA-24-1417-01A-01W-0549-09	59	58	1	41	1.694915e-02	1	exome+100bp flanks	34834024	17	40	4.880286e-07	1.148303e-06
TCGA-24-1418-01A-01W-0549-09	47	44	3	36	6.382979e-02	1	exome+100bp flanks	34834024	7	35	2.009530e-07	1.004765e-06
TCGA-24-1419-01A-01W-0545-08	30	30	0	27	0	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-24-1422-01A-01W-0545-08	85	84	1	64	1.176471e-02	1	exome+100bp flanks	34834024	20	58	5.741513e-07	1.665039e-06
TCGA-24-1423-01A-01W-0545-08	55	54	1	47	1.818182e-02	1	exome+100bp flanks	34834024	7	43	2.009530e-07	1.234425e-06
TCGA-24-1424-01A-01W-0549-09	53	47	6	36	1.132075e-01	1	exome+100bp flanks	34834024	10	31	2.870756e-07	8.899345e-07
TCGA-24-1425-01A-02W-0553-09	33	30	3	22	9.090909e-02	1	exome+100bp flanks	34834024	8	22	2.296605e-07	6.315664e-07
TCGA-24-1426-01A-01W-0549-09	32	30	2	18	6.250000e-02	1	exome+100bp flanks	34834024	12	17	3.444908e-07	4.880286e-07
TCGA-24-1427-01A-01W-0549-09	61	58	3	45	4.918033e-02	1	exome+100bp flanks	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-24-1428-01A-01W-0549-09	16	16	0	13	0	1	exome+100bp flanks	34834024	3	12	8.612269e-08	3.444908e-07
TCGA-24-1431-01A-01D-0472-08	31	31	0	25	0	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-24-1434-01A-01W-0545-08	39	37	2	29	5.128205e-02	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-24-1435-01A-01W-0549-09	86	79	7	64	8.139535e-02	1	exome+100bp flanks	34834024	13	62	3.731983e-07	1.779869e-06
TCGA-24-1436-01A-01W-0549-09	50	46	4	32	8.000000e-02	1	exome+100bp flanks	34834024	13	29	3.731983e-07	8.325194e-07
TCGA-24-1463-01A-01W-0549-09	69	63	6	53	8.695652e-02	1	exome+100bp flanks	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-24-1464-01A-01W-0549-09	60	51	9	36	1.500000e-01	1	exome+100bp flanks	34834024	15	34	4.306135e-07	9.760572e-07
TCGA-24-1466-01A-01W-0545-08	47	45	2	37	4.255319e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-24-1469-01A-01W-0553-09	166	148	18	111	1.084337e-01	1	exome+100bp flanks	34834024	35	108	1.004765e-06	3.100417e-06
TCGA-24-1470-01A-01W-0553-09	89	82	7	61	7.865169e-02	1	exome+100bp flanks	34834024	18	55	5.167362e-07	1.578916e-06
TCGA-24-1471-01A-01W-0551-08	23	23	0	19	0	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-24-1474-01A-01W-0551-08	38	38	0	33	0	1	exome+100bp flanks	34834024	4	31	1.148303e-07	8.899345e-07
TCGA-24-1544-01A-01W-0615-10	27	27	0	18	0	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-24-1545-01A-01W-0615-10	19	19	0	18	0	1	exome+100bp flanks	34834024	1	18	2.870756e-08	5.167362e-07
TCGA-24-1546-01A-01W-0615-10	12	12	0	10	0	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-24-1548-01A-01W-0615-10	29	29	0	25	0	1	exome+100bp flanks	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-24-1549-01A-01W-0553-09	43	34	9	27	2.093023e-01	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-24-1551-01A-01W-0551-08	34	31	3	22	8.823529e-02	1	exome+100bp flanks	34834024	9	20	2.583681e-07	5.741513e-07
TCGA-24-1552-01A-01W-0551-08	36	35	1	28	2.777778e-02	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-24-1553-01A-01W-0552-10	31	30	1	26	3.225806e-02	1	exome+100bp flanks	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-24-1555-01A-01W-0552-10	47	46	1	39	2.127660e-02	1	exome+100bp flanks	34834024	7	37	2.009530e-07	1.062180e-06
TCGA-24-1556-01A-01W-0615-10	51	49	2	39	3.921569e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-24-1557-01A-01W-0615-10	47	47	0	41	0	1	exome+100bp flanks	34834024	6	40	1.722454e-07	1.148303e-06
TCGA-24-1558-01A-01W-0615-10	23	23	0	19	0	1	exome+100bp flanks	34834024	4	19	1.148303e-07	5.454437e-07
TCGA-24-1560-01A-01W-0615-10	28	28	0	21	0	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-24-1562-01A-01W-0553-09	32	30	2	25	6.250000e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-24-1563-01A-01W-0553-09	74	70	4	53	5.405405e-02	1	exome+100bp flanks	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-24-1564-01A-01W-0551-08	34	34	0	26	0	1	exome+100bp flanks	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-24-1565-01A-01W-0551-08	31	31	0	23	0	1	exome+100bp flanks	34834024	8	22	2.296605e-07	6.315664e-07
TCGA-24-1567-01A-01W-0615-10	51	50	1	40	1.960784e-02	1	exome+100bp flanks	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-24-1603-01A-01W-0551-08	25	25	0	22	0	1	exome+100bp flanks	34834024	3	22	8.612269e-08	6.315664e-07
TCGA-24-1604-01A-01W-0552-10	64	64	0	49	0	1	exome+100bp flanks	34834024	15	47	4.306135e-07	1.349256e-06
TCGA-24-1614-01A-01W-0552-10	36	36	0	28	0	1	exome+100bp flanks	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-24-1616-01A-01W-0553-09	64	59	5	49	7.812500e-02	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-24-1842-01A-01W-0639-09	42	38	4	29	9.523810e-02	1	exome+100bp flanks	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-24-1843-01A-01W-0639-09	92	81	11	63	1.195652e-01	1	exome+100bp flanks	34834024	17	60	4.880286e-07	1.722454e-06
TCGA-24-1844-01A-01W-0639-09	159	143	16	120	1.006289e-01	1	exome+100bp flanks	34834024	23	115	6.602740e-07	3.301370e-06
TCGA-24-1845-01A-01W-0639-09	150	133	17	107	1.133333e-01	1	exome+100bp flanks	34834024	26	98	7.463967e-07	2.813341e-06
TCGA-24-1846-01A-01W-0639-09	118	103	15	83	1.271186e-01	1	exome+100bp flanks	34834024	19	82	5.454437e-07	2.354020e-06
TCGA-24-1847-01A-01W-0633-09	89	81	8	65	8.988764e-02	1	exome+100bp flanks	34834024	13	58	3.731983e-07	1.665039e-06
TCGA-24-1849-01A-01W-0639-09	103	87	16	71	1.553398e-01	1	exome+100bp flanks	34834024	16	70	4.593210e-07	2.009530e-06
TCGA-24-1850-01A-01W-0639-09	85	72	13	56	1.529412e-01	1	exome+100bp flanks	34834024	15	49	4.306135e-07	1.406671e-06
TCGA-24-2019-01A-02W-0722-08	32	32	0	23	0	1	exome+100bp flanks	34834024	9	22	2.583681e-07	6.315664e-07
TCGA-24-2024-01A-02W-0722-08	79	79	0	64	0	1	exome+100bp flanks	34834024	13	63	3.731983e-07	1.808577e-06
TCGA-24-2030-01A-01W-0722-08	49	49	0	38	0	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-24-2035-01A-01W-0722-08	64	62	2	51	3.125000e-02	1	exome+100bp flanks	34834024	11	48	3.157832e-07	1.377963e-06
TCGA-24-2038-01A-01W-0722-08	10	10	0	9	0	1	exome+100bp flanks	34834024	1	9	2.870756e-08	2.583681e-07
TCGA-24-2254-01A-01W-0722-08	45	45	0	32	0	1	exome+100bp flanks	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-24-2260-01A-01W-0722-08	43	42	1	34	2.325581e-02	1	exome+100bp flanks	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-24-2261-01A-01W-0722-08	38	37	1	25	2.631579e-02	1	exome+100bp flanks	34834024	11	25	3.157832e-07	7.176891e-07
TCGA-24-2262-01A-01W-0799-08	48	46	2	31	4.166667e-02	1	exome+100bp flanks	34834024	15	30	4.306135e-07	8.612269e-07
TCGA-24-2267-01A-01W-0799-08	95	93	2	71	2.105263e-02	1	exome+100bp flanks	34834024	21	66	6.028589e-07	1.894699e-06
TCGA-24-2271-01A-01W-0799-08	19	19	0	14	0	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-24-2280-01A-01W-0799-08	5	5	0	3	0	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-24-2281-01A-01W-0799-08	34	34	0	27	0	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-24-2288-01A-01W-0799-08	4	4	0	3	0	1	exome+100bp flanks	34834024	1	3	2.870756e-08	8.612269e-08
TCGA-24-2289-01A-01W-0799-08	4	3	1	3	2.500000e-01	1	exome+100bp flanks	34834024	0	3	0	8.612269e-08
TCGA-24-2290-01A-01W-0799-08	57	56	1	38	1.754386e-02	1	exome+100bp flanks	34834024	18	37	5.167362e-07	1.062180e-06
TCGA-24-2293-01A-01W-0799-08	37	36	1	30	2.702703e-02	1	exome+100bp flanks	34834024	6	29	1.722454e-07	8.325194e-07
TCGA-24-2298-01A-01W-0799-08	51	51	0	44	0	1	exome+100bp flanks	34834024	7	42	2.009530e-07	1.205718e-06
TCGA-25-1313-01A-01W-0492-08	102	100	2	77	1.960784e-02	0	coding only	34834024	23	73	6.602740e-07	2.095652e-06
TCGA-25-1315-01A-01W-0494-09	59	49	10	41	1.694915e-01	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-25-1316-01A-01W-0494-09	21	20	1	13	4.761905e-02	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-25-1317-01A-01W-0490-10	42	42	0	36	0	1	exome+100bp flanks	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-25-1318-01A-01W-0490-10	56	54	2	42	3.571429e-02	1	exome+100bp flanks	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-25-1319-01A-01W-0492-08	53	53	0	44	0	1	exome+100bp flanks	34834024	7	43	2.009530e-07	1.234425e-06
TCGA-25-1320-01A-01W-0492-08	32	32	0	23	0	1	exome+100bp flanks	34834024	7	22	2.009530e-07	6.315664e-07
TCGA-25-1321-01A-01W-0492-08	33	33	0	26	0	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-25-1322-01A-01W-0494-09	48	41	7	28	1.458333e-01	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-25-1324-01A-01W-0490-10	39	37	2	33	5.128205e-02	1	exome+100bp flanks	34834024	4	29	1.148303e-07	8.325194e-07
TCGA-25-1325-01A-01W-0490-10	30	30	0	30	0	1	exome+100bp flanks	34834024	0	29	0	8.325194e-07
TCGA-25-1326-01A-01W-0492-08	110	110	0	91	0	0	coding only	34834024	17	82	4.880286e-07	2.354020e-06
TCGA-25-1328-01A-01W-0492-08	8	8	0	7	0	1	exome+100bp flanks	34834024	1	6	2.870756e-08	1.722454e-07
TCGA-25-1329-01A-01W-0492-08	35	33	2	27	5.714286e-02	1	exome+100bp flanks	34834024	5	25	1.435378e-07	7.176891e-07
TCGA-25-1623-01A-01W-0615-10	9	9	0	9	0	1	exome+100bp flanks	34834024	0	9	0	2.583681e-07
TCGA-25-1625-01A-01W-0615-10	32	32	0	30	0	1	exome+100bp flanks	34834024	2	26	5.741513e-08	7.463967e-07
TCGA-25-1626-01A-01W-0615-10	8	8	0	5	0	1	exome+100bp flanks	34834024	3	5	8.612269e-08	1.435378e-07
TCGA-25-1627-01A-01W-0615-10	30	30	0	25	0	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-25-1628-01A-01W-0615-10	23	23	0	15	0	1	exome+100bp flanks	34834024	8	13	2.296605e-07	3.731983e-07
TCGA-25-1630-01A-01W-0615-10	44	44	0	34	0	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-25-1631-01A-01W-0615-10	27	27	0	21	0	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-25-1632-01A-01W-0615-10	45	45	0	35	0	1	exome+100bp flanks	34834024	8	33	2.296605e-07	9.473496e-07
TCGA-25-1633-01A-01W-0615-10	14	14	0	11	0	1	exome+100bp flanks	34834024	2	10	5.741513e-08	2.870756e-07
TCGA-25-1634-01A-01W-0615-10	25	25	0	20	0	1	exome+100bp flanks	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-25-1635-01A-01W-0615-10	18	17	1	17	5.555556e-02	1	exome+100bp flanks	34834024	0	17	0	4.880286e-07
TCGA-25-2042-01A-01W-0799-08	43	43	0	34	0	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-25-2391-01A-01W-0799-08	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-25-2392-01A-01W-0799-08	85	84	1	65	1.176471e-02	1	exome+100bp flanks	34834024	18	61	5.167362e-07	1.751161e-06
TCGA-25-2393-01A-01W-0799-08	49	49	0	41	0	1	exome+100bp flanks	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-25-2396-01A-01W-0799-08	23	23	0	16	0	1	exome+100bp flanks	34834024	7	14	2.009530e-07	4.019059e-07
TCGA-25-2398-01A-01W-0799-08	35	35	0	22	0	1	exome+100bp flanks	34834024	13	20	3.731983e-07	5.741513e-07
TCGA-25-2399-01A-01W-0799-08	37	36	1	27	2.702703e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-25-2400-01A-01W-0799-08	48	46	2	36	4.166667e-02	1	exome+100bp flanks	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-25-2401-01A-01W-0799-08	55	55	0	46	0	1	exome+100bp flanks	34834024	8	46	2.296605e-07	1.320548e-06
TCGA-25-2404-01A-01W-0799-08	37	36	1	30	2.702703e-02	1	exome+100bp flanks	34834024	6	29	1.722454e-07	8.325194e-07
TCGA-25-2408-01A-01W-0799-08	10	10	0	7	0	1	exome+100bp flanks	34834024	3	6	8.612269e-08	1.722454e-07
TCGA-25-2409-01A-01W-0799-08	21	21	0	16	0	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-29-1688-01A-01W-0633-09	53	46	7	37	1.320755e-01	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-29-1690-01A-01W-0633-09	63	48	15	31	2.380952e-01	1	exome+100bp flanks	34834024	14	28	4.019059e-07	8.038118e-07
TCGA-29-1691-01A-01W-0633-09	192	176	16	140	8.333333e-02	1	exome+100bp flanks	34834024	34	132	9.760572e-07	3.789399e-06
TCGA-29-1693-01A-01W-0633-09	108	92	16	69	1.481481e-01	1	exome+100bp flanks	34834024	23	65	6.602740e-07	1.865992e-06
TCGA-29-1694-01A-01W-0633-09	39	34	5	27	1.282051e-01	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-29-1695-01A-01W-0633-09	76	67	9	47	1.184211e-01	1	exome+100bp flanks	34834024	19	44	5.454437e-07	1.263133e-06
TCGA-29-1696-01A-01W-0633-09	61	53	8	41	1.311475e-01	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-29-1697-01A-01W-0633-09	50	40	10	28	2.000000e-01	1	exome+100bp flanks	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-29-1698-01A-01W-0633-09	69	58	11	44	1.594203e-01	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-29-1699-01A-01W-0633-09	88	75	13	60	1.477273e-01	1	exome+100bp flanks	34834024	15	59	4.306135e-07	1.693746e-06
TCGA-29-1701-01A-01W-0633-09	57	44	13	33	2.280702e-01	1	exome+100bp flanks	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-29-1702-01A-01W-0633-09	74	61	13	41	1.756757e-01	1	exome+100bp flanks	34834024	20	37	5.741513e-07	1.062180e-06
TCGA-29-1703-01A-01W-0633-09	93	74	19	54	2.043011e-01	1	exome+100bp flanks	34834024	18	49	5.167362e-07	1.406671e-06
TCGA-29-1705-01A-01W-0633-09	54	50	4	32	7.407407e-02	1	exome+100bp flanks	34834024	17	29	4.880286e-07	8.325194e-07
TCGA-29-1707-01A-01W-0633-09	51	43	8	31	1.568627e-01	1	exome+100bp flanks	34834024	12	28	3.444908e-07	8.038118e-07
TCGA-29-1710-01A-02W-0633-09	44	39	5	27	1.136364e-01	1	exome+100bp flanks	34834024	12	26	3.444908e-07	7.463967e-07
TCGA-29-1711-01A-01W-0633-09	71	58	13	48	1.830986e-01	1	exome+100bp flanks	34834024	10	44	2.870756e-07	1.263133e-06
TCGA-29-1761-01A-01W-0633-09	189	163	26	124	1.375661e-01	1	exome+100bp flanks	34834024	36	116	1.033472e-06	3.330078e-06
TCGA-29-1762-01A-01W-0633-09	78	62	16	49	2.051282e-01	1	exome+100bp flanks	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-29-1763-01A-02W-0633-09	125	110	15	76	1.200000e-01	1	exome+100bp flanks	34834024	34	70	9.760572e-07	2.009530e-06
TCGA-29-1764-01A-01W-0633-09	86	76	10	57	1.162791e-01	1	exome+100bp flanks	34834024	19	55	5.454437e-07	1.578916e-06
TCGA-29-1766-01A-01W-0633-09	65	60	5	45	7.692308e-02	1	exome+100bp flanks	34834024	15	45	4.306135e-07	1.291840e-06
TCGA-29-1768-01A-01W-0633-09	65	50	15	38	2.307692e-01	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-29-1769-01A-01W-0639-09	79	74	5	60	6.329114e-02	1	exome+100bp flanks	34834024	12	59	3.444908e-07	1.693746e-06
TCGA-29-1770-01A-01W-0633-09	100	80	20	62	2.000000e-01	1	exome+100bp flanks	34834024	18	57	5.167362e-07	1.636331e-06
TCGA-29-1771-01A-01W-0633-09	18	15	3	12	1.666667e-01	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-29-1774-01A-01W-0639-09	46	40	6	31	1.304348e-01	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-29-1775-01A-01W-0639-09	131	109	22	83	1.679389e-01	1	exome+100bp flanks	34834024	25	80	7.176891e-07	2.296605e-06
TCGA-29-1776-01A-01W-0639-09	58	52	6	45	1.034483e-01	1	exome+100bp flanks	34834024	5	41	1.435378e-07	1.177010e-06
TCGA-29-1777-01A-01W-0639-09	137	120	17	94	1.240876e-01	1	exome+100bp flanks	34834024	25	87	7.176891e-07	2.497558e-06
TCGA-29-1778-01A-01W-0639-09	46	40	6	23	1.304348e-01	1	exome+100bp flanks	34834024	17	22	4.880286e-07	6.315664e-07
TCGA-29-1781-01A-01W-0633-09	112	91	21	74	1.875000e-01	1	exome+100bp flanks	34834024	17	70	4.880286e-07	2.009530e-06
TCGA-29-1783-01A-01W-0633-09	65	59	6	49	9.230769e-02	1	exome+100bp flanks	34834024	9	47	2.583681e-07	1.349256e-06
TCGA-29-1784-01A-02W-0633-09	111	98	13	81	1.171171e-01	1	exome+100bp flanks	34834024	16	75	4.593210e-07	2.153067e-06
TCGA-29-1785-01A-01W-0633-09	80	72	8	53	1.000000e-01	1	exome+100bp flanks	34834024	18	49	5.167362e-07	1.406671e-06
TCGA-29-2427-01A-01W-0799-08	56	56	0	40	0	1	exome+100bp flanks	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-29-2429-01A-01D-1526-09	86	80	6	57	6.976744e-02	1	exome+100bp flanks	34834024	22	55	6.315664e-07	1.578916e-06
TCGA-29-2431-01A-01D-1526-09	34	32	2	26	5.882353e-02	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-29-2432-01A-01D-1526-09	94	86	8	62	8.510638e-02	1	exome+100bp flanks	34834024	23	58	6.602740e-07	1.665039e-06
TCGA-29-2434-01A-01D-1526-09	117	107	10	85	8.547009e-02	1	exome+100bp flanks	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-29-2436-01A-01D-1526-09	11	9	2	5	1.818182e-01	1	exome+100bp flanks	34834024	4	3	1.148303e-07	8.612269e-08
TCGA-30-1714-01A-02W-0633-09	81	68	13	58	1.604938e-01	1	exome+100bp flanks	34834024	10	54	2.870756e-07	1.550208e-06
TCGA-30-1718-01A-01W-0633-09	121	107	14	81	1.157025e-01	1	exome+100bp flanks	34834024	25	78	7.176891e-07	2.239190e-06
TCGA-30-1853-01A-02W-0699-08	34	34	0	24	0	1	exome+100bp flanks	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-30-1855-01A-01W-0639-09	123	105	18	75	1.463415e-01	1	exome+100bp flanks	34834024	28	74	8.038118e-07	2.124360e-06
TCGA-30-1856-01A-01W-0639-09	68	60	8	49	1.176471e-01	1	exome+100bp flanks	34834024	10	44	2.870756e-07	1.263133e-06
TCGA-30-1857-01A-02W-0639-09	94	81	13	67	1.382979e-01	1	exome+100bp flanks	34834024	12	64	3.444908e-07	1.837284e-06
TCGA-30-1862-01A-02W-0699-08	38	38	0	32	0	1	exome+100bp flanks	34834024	5	31	1.435378e-07	8.899345e-07
TCGA-30-1891-01A-01W-0699-08	69	69	0	52	0	1	exome+100bp flanks	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-31-1950-01A-01W-0699-08	21	21	0	19	0	1	exome+100bp flanks	34834024	1	19	2.870756e-08	5.454437e-07
TCGA-31-1953-01A-01W-0699-08	37	36	1	32	2.702703e-02	1	exome+100bp flanks	34834024	4	30	1.148303e-07	8.612269e-07
TCGA-31-1959-01A-01W-0699-08	53	52	1	38	1.886792e-02	1	exome+100bp flanks	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-36-1568-01A-01W-0615-10	44	44	0	35	0	1	exome+100bp flanks	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-36-1569-01A-01W-0615-10	9	9	0	7	0	1	exome+100bp flanks	34834024	2	7	5.741513e-08	2.009530e-07
TCGA-36-1570-01A-01W-0615-10	28	28	0	20	0	1	exome+100bp flanks	34834024	8	20	2.296605e-07	5.741513e-07
TCGA-36-1571-01A-01W-0615-10	13	13	0	8	0	1	exome+100bp flanks	34834024	5	8	1.435378e-07	2.296605e-07
TCGA-36-1574-01A-01W-0615-10	18	18	0	16	0	1	exome+100bp flanks	34834024	2	16	5.741513e-08	4.593210e-07
TCGA-36-1575-01A-01W-0615-10	33	32	1	31	3.030303e-02	1	exome+100bp flanks	34834024	1	30	2.870756e-08	8.612269e-07
TCGA-36-1576-01A-01W-0615-10	14	14	0	11	0	1	exome+100bp flanks	34834024	3	10	8.612269e-08	2.870756e-07
TCGA-36-1577-01A-01W-0615-10	60	60	0	56	0	1	exome+100bp flanks	34834024	4	54	1.148303e-07	1.550208e-06
TCGA-36-1578-01A-01W-0615-10	55	55	0	45	0	1	exome+100bp flanks	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-36-1580-01A-01W-0615-10	12	12	0	12	0	1	exome+100bp flanks	34834024	0	12	0	3.444908e-07
TCGA-36-2530-01A-01D-1526-09	83	72	11	58	1.325301e-01	1	exome+100bp flanks	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-36-2532-01A-01D-1526-09	47	44	3	35	6.382979e-02	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-36-2533-01A-01D-1526-09	81	73	8	58	9.876543e-02	1	exome+100bp flanks	34834024	14	55	4.019059e-07	1.578916e-06
TCGA-36-2534-01A-01D-1526-09	132	122	10	95	7.575758e-02	1	exome+100bp flanks	34834024	26	91	7.463967e-07	2.612388e-06
TCGA-36-2537-01A-01D-1526-09	48	43	5	28	1.041667e-01	1	exome+100bp flanks	34834024	15	24	4.306135e-07	6.889816e-07
TCGA-36-2538-01A-01D-1526-09	50	47	3	38	6.000000e-02	1	exome+100bp flanks	34834024	8	36	2.296605e-07	1.033472e-06
TCGA-36-2539-01A-01D-1526-09	71	62	9	46	1.267606e-01	1	exome+100bp flanks	34834024	15	43	4.306135e-07	1.234425e-06
TCGA-36-2540-01A-01D-1526-09	8	7	1	5	1.250000e-01	1	exome+100bp flanks	34834024	2	5	5.741513e-08	1.435378e-07
TCGA-36-2542-01A-01D-1526-09	73	67	6	54	8.219178e-02	1	exome+100bp flanks	34834024	12	51	3.444908e-07	1.464086e-06
TCGA-36-2543-01A-01D-1526-09	74	66	8	52	1.081081e-01	1	exome+100bp flanks	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-36-2544-01A-01D-1526-09	73	63	10	51	1.369863e-01	1	exome+100bp flanks	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-36-2545-01A-01D-1526-09	71	60	11	47	1.549296e-01	1	exome+100bp flanks	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-36-2547-01A-01D-1526-09	146	135	11	109	7.534247e-02	1	exome+100bp flanks	34834024	23	105	6.602740e-07	3.014294e-06
TCGA-36-2548-01A-01D-1526-09	49	45	4	38	8.163265e-02	1	exome+100bp flanks	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-36-2551-01A-01D-1526-09	38	31	7	20	1.842105e-01	1	exome+100bp flanks	34834024	11	20	3.157832e-07	5.741513e-07
TCGA-36-2552-01A-01D-1526-09	72	67	5	46	6.944444e-02	1	exome+100bp flanks	34834024	19	44	5.454437e-07	1.263133e-06
TCGA-42-2582-01A-01D-1526-09	88	79	9	69	1.022727e-01	1	exome+100bp flanks	34834024	10	63	2.870756e-07	1.808577e-06
TCGA-42-2587-01A-01D-1526-09	142	129	13	104	9.154930e-02	1	exome+100bp flanks	34834024	23	100	6.602740e-07	2.870756e-06
TCGA-42-2588-01A-01D-1526-09	38	33	5	25	1.315789e-01	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-42-2589-01A-01D-1526-09	88	78	10	65	1.136364e-01	1	exome+100bp flanks	34834024	13	61	3.731983e-07	1.751161e-06
TCGA-42-2590-01A-01D-1526-09	58	52	6	42	1.034483e-01	1	exome+100bp flanks	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-42-2591-01A-01D-1526-09	77	70	7	52	9.090909e-02	1	exome+100bp flanks	34834024	17	51	4.880286e-07	1.464086e-06
TCGA-57-1582-01A-01W-0615-10	67	67	0	46	0	1	exome+100bp flanks	34834024	21	44	6.028589e-07	1.263133e-06
TCGA-57-1583-01A-01W-0615-10	8	8	0	7	0	1	exome+100bp flanks	34834024	1	6	2.870756e-08	1.722454e-07
TCGA-57-1584-01A-01W-0615-10	31	31	0	26	0	1	exome+100bp flanks	34834024	5	26	1.435378e-07	7.463967e-07
TCGA-57-1586-01A-02W-0633-09	26	15	11	11	4.230769e-01	1	exome+100bp flanks	34834024	3	10	8.612269e-08	2.870756e-07
TCGA-57-1993-01A-01W-0699-08	45	45	0	34	0	1	exome+100bp flanks	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-59-2348-01A-01W-0799-08	72	71	1	52	1.388889e-02	1	exome+100bp flanks	34834024	18	49	5.167362e-07	1.406671e-06
TCGA-59-2350-01A-01W-0799-08	8	8	0	6	0	1	exome+100bp flanks	34834024	2	5	5.741513e-08	1.435378e-07
TCGA-59-2351-01A-01W-0799-08	74	74	0	54	0	1	exome+100bp flanks	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-59-2352-01A-01W-0799-08	73	70	3	53	4.109589e-02	1	exome+100bp flanks	34834024	17	51	4.880286e-07	1.464086e-06
TCGA-59-2354-01A-01W-0799-08	51	51	0	33	0	1	exome+100bp flanks	34834024	17	33	4.880286e-07	9.473496e-07
TCGA-59-2355-01A-01W-0799-08	20	18	2	15	1.000000e-01	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-59-2363-01A-01W-0799-08	78	76	2	56	2.564103e-02	1	exome+100bp flanks	34834024	19	52	5.454437e-07	1.492793e-06
TCGA-59-2372-01A-01D-1526-09	93	83	10	67	1.075269e-01	1	exome+100bp flanks	34834024	15	65	4.306135e-07	1.865992e-06
TCGA-61-1722-01A-01D-1556-09	73	64	9	46	1.232877e-01	1	exome+100bp flanks	34834024	18	46	5.167362e-07	1.320548e-06
TCGA-61-1725-01A-01W-0639-09	61	51	10	43	1.639344e-01	1	exome+100bp flanks	34834024	8	41	2.296605e-07	1.177010e-06
TCGA-61-1727-01A-01W-0639-09	136	122	14	100	1.029412e-01	1	exome+100bp flanks	34834024	21	96	6.028589e-07	2.755926e-06
TCGA-61-1728-01A-01W-0699-08	13	13	0	7	0	1	exome+100bp flanks	34834024	6	7	1.722454e-07	2.009530e-07
TCGA-61-1730-01A-01W-0639-09	56	47	9	37	1.607143e-01	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-61-1733-01A-01W-0639-09	57	54	3	38	5.263158e-02	1	exome+100bp flanks	34834024	15	38	4.306135e-07	1.090887e-06
TCGA-61-1736-01B-01W-0722-08	24	24	0	17	0	1	exome+100bp flanks	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-61-1737-01A-01W-0639-09	89	78	11	63	1.235955e-01	1	exome+100bp flanks	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-61-1738-01A-01W-0639-09	66	54	12	39	1.818182e-01	1	exome+100bp flanks	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-61-1740-01A-01W-0639-09	199	178	21	127	1.055276e-01	1	exome+100bp flanks	34834024	48	116	1.377963e-06	3.330078e-06
TCGA-61-1741-01A-02W-0639-09	41	37	4	27	9.756098e-02	1	exome+100bp flanks	34834024	10	26	2.870756e-07	7.463967e-07
TCGA-61-1895-01A-01W-0639-09	65	58	7	50	1.076923e-01	1	exome+100bp flanks	34834024	8	50	2.296605e-07	1.435378e-06
TCGA-61-1899-01A-01W-0639-09	65	54	11	42	1.692308e-01	1	exome+100bp flanks	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-61-1900-01A-01W-0639-09	112	87	25	68	2.232143e-01	1	exome+100bp flanks	34834024	19	64	5.454437e-07	1.837284e-06
TCGA-61-1901-01A-01W-0639-09	64	50	14	36	2.187500e-01	1	exome+100bp flanks	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-61-1903-01A-01W-0639-09	57	48	9	43	1.578947e-01	1	exome+100bp flanks	34834024	4	41	1.148303e-07	1.177010e-06
TCGA-61-1904-01A-01W-0639-09	93	88	5	64	5.376344e-02	1	exome+100bp flanks	34834024	23	63	6.602740e-07	1.808577e-06
TCGA-61-1906-01A-01W-0639-09	59	53	6	40	1.016949e-01	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-61-1907-01A-01W-0639-09	118	108	10	85	8.474576e-02	1	exome+100bp flanks	34834024	22	79	6.315664e-07	2.267898e-06
TCGA-61-1910-01A-01W-0639-09	139	126	13	85	9.352518e-02	1	exome+100bp flanks	34834024	39	78	1.119595e-06	2.239190e-06
TCGA-61-1911-01A-01W-0639-09	39	32	7	22	1.794872e-01	1	exome+100bp flanks	34834024	10	20	2.870756e-07	5.741513e-07
TCGA-61-1913-01A-01W-0639-09	60	54	6	43	1.000000e-01	1	exome+100bp flanks	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-61-1914-01A-01W-0639-09	105	94	11	76	1.047619e-01	1	exome+100bp flanks	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-61-1915-01A-01W-0639-09	102	95	7	68	6.862745e-02	1	exome+100bp flanks	34834024	25	66	7.176891e-07	1.894699e-06
TCGA-61-1919-01A-01W-0699-08	39	39	0	30	0	1	exome+100bp flanks	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-61-1995-01A-01W-0722-08	19	19	0	16	0	1	exome+100bp flanks	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-61-1998-01A-01W-0722-08	63	59	4	47	6.349206e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-61-2000-01A-01W-0722-08	5	5	0	4	0	1	exome+100bp flanks	34834024	1	4	2.870756e-08	1.148303e-07
TCGA-61-2002-01A-01W-0722-08	39	36	3	29	7.692308e-02	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-61-2003-01A-01W-0722-08	24	22	2	16	8.333333e-02	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-61-2008-01A-02W-0722-08	54	54	0	42	0	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-61-2009-01A-01W-0722-08	61	60	1	51	1.639344e-02	1	exome+100bp flanks	34834024	9	50	2.583681e-07	1.435378e-06
TCGA-61-2012-01A-01W-0722-08	86	85	1	67	1.162791e-02	1	exome+100bp flanks	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-61-2016-01A-01W-0722-08	18	18	0	14	0	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-61-2088-01A-01W-0722-08	19	19	0	15	0	1	exome+100bp flanks	34834024	4	13	1.148303e-07	3.731983e-07
TCGA-61-2092-01A-01W-0722-08	28	27	1	18	3.571429e-02	1	exome+100bp flanks	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-61-2094-01A-01W-0722-08	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-61-2095-01A-01W-0722-08	12	12	0	8	0	1	exome+100bp flanks	34834024	4	7	1.148303e-07	2.009530e-07
TCGA-61-2097-01A-02W-0722-08	45	45	0	35	0	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-61-2101-01A-01W-0722-08	34	33	1	21	2.941176e-02	1	exome+100bp flanks	34834024	11	20	3.157832e-07	5.741513e-07
TCGA-61-2102-01A-01W-0722-08	60	59	1	44	1.666667e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-61-2104-01A-01W-0722-08	3	3	0	3	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-61-2109-01A-01W-0722-08	1	1	0	0	0	1	exome+100bp flanks	34834024	1	0	2.870756e-08	0
TCGA-61-2110-01A-01W-0722-08	25	25	0	20	0	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-61-2111-01A-01W-0722-08	34	34	0	28	0	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-61-2113-01A-01W-0722-08	37	37	0	25	0	1	exome+100bp flanks	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-61-2612-01A-01W-1092-09	47	42	5	27	1.063830e-01	1	exome+100bp flanks	34834024	15	25	4.306135e-07	7.176891e-07
TCGA-61-2613-01A-01W-1092-09	80	73	7	55	8.750000e-02	1	exome+100bp flanks	34834024	18	54	5.167362e-07	1.550208e-06
TCGA-61-2614-01A-01W-1092-09	57	52	5	41	8.771930e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06