gene1	gene2	pval	qval
20q-Amp	Del_3p14.1	0.000106	1
PBRM1	3q-Amp	0.000108	1
Amp_17q24.3	Del_1q44	0.000109	1
16q-Amp	10q-Del	0.000113	1
Amp_17q24.3	Del_1p31.1	0.000114	1
21q-Del	Del_3p26.3	0.000117	1
17p-Amp	Del_2q22.1	0.000128	1
17p-Amp	Del_1q44	0.000134	1
VHL	Amp_3q26.32	0.000137	1
Del_1q44	Del_3p26.3	0.000143	1
17p-Amp	8p-Del	0.000157	1
PBRM1	12p-Amp	0.00016	1
TP53	VHL	0.000166	1
Amp_7q31.2	Del_1p31.1	0.000174	1
21q-Del	Del_3p21.2	0.000178	1
12q-Amp	Del_3p12.2	0.00018	1
3p-Amp	Del_3p14.1	0.000183	1
7q-Amp	Del_2q37.3	0.000193	1
Amp_3q26.32	Del_3p14.1	0.000249	1
PBRM1	12q-Amp	0.000271	1
7q-Amp	Del_14q31.1	0.000283	1
17q-Amp	Del_2q37.3	0.000299	1
7q-Amp	Del_1p31.1	0.000302	1
7p-Amp	Del_14q31.1	0.000317	1
7p-Amp	Del_1p31.1	0.000337	1
VHL	Del_13q13.2	0.000346	1
VHL	6p-Del	0.000377	1
17q-Amp	Del_1q44	0.000413	1
3q-Amp	Del_1p31.1	0.000434	1
Amp_17q24.3	Del_2q37.3	0.000441	1
12p-Amp	Del_3p12.2	0.000453	1
16q-Amp	Del_10q23.31	0.000461	1
PBRM1	Del_13q13.2	0.000475	1
Amp_3q26.32	Del_3p12.2	0.00048	1
3p-Amp	Del_3p12.2	0.000492	1
17q-Amp	13q-Del	0.000514	1
Amp_7q31.2	Del_2q37.3	0.000524	1
VHL	21q-Del	0.000559	1
Del_1q44	Del_3p21.2	0.000565	1
17p-Amp	Amp_5q35.1	0.00062	1
VHL	Del_2q37.3	0.000633	1
20q-Amp	Del_13q13.2	0.000664	1
PBRM1	Amp_3q26.32	0.000676	1
Amp_3q26.32	Del_10q23.31	0.000683	1
VHL	18q-Del	0.000698	1
17p-Amp	Del_2q37.3	0.000703	1
17q-Amp	Del_2q22.1	0.000722	1
Amp_17q24.3	Del_13q13.2	0.000735	1
VHL	Del_1p31.1	0.000749	1
3p-Del	Amp_3q26.32	0.000788	1
16q-Amp	Del_1p36.31	0.000798	1
Amp_5q35.1	Del_2q37.3	0.000804	1
16q-Amp	Del_1p31.1	0.000825	1
17q-Amp	Del_9p21.3	0.00085	1
7p-Amp	Del_2q37.3	0.000875	1
17q-Amp	Amp_5q35.1	0.000897	1
17q-Amp	17p-Del	0.000919	1
Amp_7q31.2	Del_13q13.2	0.000936	1
Amp_17q24.3	Del_1p36.31	0.000942	1
10q-Del	Amp_3q26.32	0.00101	1
7q-Amp	14q-Del	0.00111	1
MTOR	Amp_17q24.3	0.00113	1
PBRM1	Del_2q22.1	0.00113	1
3q-Del	Amp_17q24.3	0.00113	1
Amp_3q26.32	Del_1p31.1	0.00116	1
1p-Del	Amp_7q31.2	0.00119	1
7p-Amp	14q-Del	0.00122	1
7p-Amp	9q-Del	0.00122	1
20p-Amp	Del_3p12.2	0.00123	1
17q-Amp	9q-Del	0.00126	1
12q-Amp	Del_6q26	0.00132	1
7p-Amp	Del_1p36.31	0.00135	1
Amp_7q31.2	Del_14q31.1	0.00137	1
7q-Amp	Del_13q13.2	0.0014	1
VHL	18p-Del	0.00141	1
20q-Amp	Del_3p12.2	0.00145	1
17q-Amp	9p-Del	0.00147	1
Amp_17q24.3	Del_2q22.1	0.00162	1
17p-Del	Del_3p26.3	0.00163	1
Amp_17q24.3	Del_14q31.1	0.00166	1
16q-Amp	Del_6q26	0.0017	1
3q-Amp	1p-Del	0.00182	1
7q-Amp	1p-Del	0.00183	1
16q-Amp	8p-Del	0.00185	1
16q-Amp	Del_13q13.2	0.00185	1
16p-Amp	10q-Del	0.00187	1
7p-Amp	1p-Del	0.002	1
Del_2q22.1	Del_3p26.3	0.00208	1
16q-Amp	Del_2q22.1	0.00225	1
Amp_5q35.1	Amp_17q24.3	0.00229	1
20p-Amp	13q-Del	0.00234	1
MTOR	17q-Amp	0.00239	1
17q-Amp	3q-Del	0.00239	1
17q-Amp	Del_9p23	0.0024	1
13q-Del	Amp_7q31.2	0.00249	1
20q-Amp	13q-Del	0.00254	1
VHL	6q-Del	0.00274	1
9q-Del	Amp_7q31.2	0.00287	1
SETD2	17p-Amp	0.00298	1
8p-Del	Amp_17q24.3	0.00303	1
7q-Amp	Del_1p36.31	0.00308	1
12q-Amp	Del_2q37.3	0.00309	1
21q-Del	Amp_5q35.1	0.00321	1
21q-Del	Del_3p14.1	0.00321	1
12p-Amp	Del_13q13.2	0.00324	1
16q-Amp	Del_9p21.3	0.00334	1
MTOR	16p-Amp	0.00347	1
7q-Amp	13q-Del	0.00347	1
PBRM1	1p-Del	0.00361	1
Amp_7q31.2	Del_2q22.1	0.00364	1
16p-Amp	Del_1q44	0.00371	1
7p-Amp	13q-Del	0.00371	1
PBRM1	13q-Del	0.00372	1
MTOR	17p-Amp	0.00385	1
17p-Amp	3q-Del	0.00385	1
7q-Amp	9q-Del	0.00408	1
PBRM1	Del_1p36.31	0.00414	1
16p-Amp	Del_1p31.1	0.00415	1
16p-Amp	Del_10q23.31	0.00422	1
12q-Amp	Del_13q13.2	0.00424	1
16p-Amp	8p-Del	0.00424	1
16p-Amp	Del_13q13.2	0.00424	1
PBRM1	Del_2q37.3	0.00442	1
PBRM1	Amp_2q32.1	0.00466	1
3p-Del	Del_1q44	0.00471	1
14q-Del	Amp_7q31.2	0.00475	1
14q-Del	Amp_17q24.3	0.00489	1
7q-Amp	Del_2q22.1	0.00499	1
17p-Amp	Del_8p23.2	0.00502	1
17p-Del	Del_3p21.2	0.00514	1
13q-Del	Amp_17q24.3	0.00521	1
1p-Del	Amp_3q26.32	0.00523	1
MTOR	16q-Amp	0.00527	1
16q-Amp	3q-Del	0.00527	1
7p-Amp	Del_2q22.1	0.00531	1
16p-Amp	Del_6q26	0.00572	1
PBRM1	Del_1q44	0.00595	1
16q-Amp	1p-Del	0.00663	1
16q-Amp	6q-Del	0.00671	1
16p-Amp	Del_2q22.1	0.0069	1
16q-Amp	Del_1q44	0.00704	1
PBRM1	2q-Amp	0.00709	1
PBRM1	21q-Del	0.00717	1
3q-Amp	Del_6q26	0.00737	1
17q-Amp	Del_8p23.2	0.00757	1
MET	VHL	0.00765	1
16q-Amp	Del_9p23	0.00795	1
12q-Amp	Del_10q23.31	0.00797	1
3q-Amp	9q-Del	0.00803	1
Del_2q22.1	Del_3p21.2	0.00804	1
Amp_3q26.32	Del_6q26	0.00808	1
VHL	Del_6q26	0.0086	1
Amp_5q35.1	Del_10q23.31	0.00884	1
16q-Amp	13q-Del	0.00904	1
10q-Del	Amp_7q31.2	0.00908	1
16p-Amp	6q-Del	0.00936	1
Amp_7q31.2	Del_1p36.31	0.00979	1
TP53	17q-Amp	0.00994	1
12q-Amp	6q-Del	0.0103	1
SETD2	Amp_7q31.2	0.0104	1
KDM5C	Amp_7q31.2	0.0105	1
16p-Amp	1p-Del	0.0105	1
17p-Del	3p-Del	0.0109	1
1p-Del	Del_3p26.3	0.011	1
12p-Amp	Del_6q26	0.0112	1
6q-Del	Amp_3q26.32	0.0113	1
PBRM1	6p-Del	0.0115	1
12q-Amp	10q-Del	0.0116	1
16q-Amp	Del_14q31.1	0.0116	1
12p-Amp	Del_2q37.3	0.012	1
Amp_7q31.2	Del_10q23.31	0.0121	1
Del_1q44	Del_3p14.1	0.0122	1
7q-Amp	8p-Del	0.0125	1
16q-Amp	17p-Del	0.0128	1
3p-Amp	Del_1p31.1	0.0128	1
7q-Amp	10q-Del	0.0128	1
10q-Del	Amp_5q35.1	0.0133	1
7p-Amp	10q-Del	0.0137	1
SETD2	7q-Amp	0.0141	1
SETD2	7p-Amp	0.0149	1
7p-Amp	9p-Del	0.0149	1
MTOR	7p-Amp	0.0152	1
13q-Del	3p-Del	0.0156	1
TP53	17p-Amp	0.0157	1
16q-Amp	9q-Del	0.0162	1
3q-Amp	Del_10q23.31	0.0167	1
17p-Del	Amp_7q31.2	0.0168	1
7q-Amp	Del_10q23.31	0.0171	1
12q-Amp	Del_2q22.1	0.0177	1
PBRM1	TP53	0.0181	1
16q-Amp	9p-Del	0.0182	1
7p-Amp	Del_10q23.31	0.0183	1
16p-Amp	13q-Del	0.0199	1
PBRM1	18q-Del	0.0202	1
16p-Amp	Del_1p36.31	0.0207	1
21q-Del	3p-Del	0.0208	1
17p-Amp	Del_4q34.3	0.0209	1
SETD2	17q-Amp	0.0213	1
FAT1	VHL	0.0216	1
3p-Del	Del_2q22.1	0.0217	1
9q-Del	Amp_17q24.3	0.022	1
SETD2	Del_13q13.2	0.0221	1
3q-Amp	10q-Del	0.0222	1
12p-Amp	Del_10q23.31	0.0224	1
7q-Amp	17p-Del	0.0226	1
13q-Del	Del_3p26.3	0.0231	1
12p-Amp	17p-Del	0.0232	1
3p-Amp	Del_6q26	0.0235	1
7p-Amp	17p-Del	0.0239	1
12p-Amp	6q-Del	0.0242	1
13q-Del	Amp_5q35.1	0.0242	1
Amp_5q35.1	Del_13q13.2	0.0242	1
STAG2	Amp_7q31.2	0.0246	1
STAG2	Del_3p21.2	0.0251	1
16q-Amp	14q-Del	0.0252	1
6p-Del	Amp_5q35.1	0.0253	1
16p-Amp	3q-Del	0.0254	1
6p-Del	Amp_3q26.32	0.0259	1
12q-Amp	6p-Del	0.0263	1
MET	Del_3p21.2	0.0272	1
STAG2	7q-Amp	0.0278	1
STAG2	7p-Amp	0.0285	1
12q-Amp	17p-Del	0.0288	1
3p-Amp	Del_1p36.31	0.0292	1
17p-Amp	5q-Amp	0.0295	1
16p-Amp	Del_14q31.1	0.0303	1
16p-Amp	6p-Del	0.0306	1
PBRM1	18p-Del	0.0308	1
MTOR	10q-Del	0.0311	1
TP53	Del_3p26.3	0.0311	1
3q-Amp	6q-Del	0.0312	1
3q-Amp	Del_1q44	0.0313	1
7p-Amp	8p-Del	0.0315	1
12p-Amp	10q-Del	0.0316	1
17p-Amp	18q-Del	0.032	1
17p-Amp	5p-Amp	0.0329	1
AR	Del_3p26.3	0.033	1
KDM5C	Amp_17q24.3	0.033	1
STAG2	Del_3p26.3	0.033	1
PBRM1	Del_1p31.1	0.0339	1
3q-Amp	Del_1p36.31	0.0339	1
12q-Amp	9q-Del	0.0343	1
7q-Amp	9p-Del	0.0344	1
3p-Amp	1p-Del	0.0352	1
20p-Amp	17p-Del	0.0356	1
PBRM1	6q-Del	0.0357	1
3p-Amp	Del_14q31.1	0.0361	1
VHL	10q-Del	0.0363	1
CUL3	PBRM1	0.0376	1
NF2	PBRM1	0.0376	1
20q-Amp	17p-Del	0.0381	1
1p-Del	Del_3p21.2	0.0382	1
MET	Del_3p26.3	0.0387	1
VHL	Del_11q23.1	0.0396	1
MTOR	Del_1q44	0.0397	1
SETD2	6p-Del	0.04	1
3p-Amp	18p-Del	0.0401	1
MTOR	Amp_7q31.2	0.041	1
Amp_7q31.2	Del_1q44	0.042	1
AR	Del_3p12.2	0.0421	1
21q-Del	Del_3p12.2	0.0422	1
17p-Del	Amp_17q24.3	0.0424	1
Amp_17q24.3	Del_8p23.2	0.0424	1
Amp_3q26.32	Del_14q31.1	0.0428	1
3q-Amp	17p-Del	0.0439	1
17q-Amp	5q-Amp	0.0444	1
17p-Amp	18p-Del	0.0452	1
16p-Amp	Del_9p21.3	0.0457	1
3q-Del	Amp_3q26.32	0.046	1
AR	PBRM1	0.0463	1
12q-Amp	Del_1p31.1	0.0476	1
8p-Del	Amp_7q31.2	0.0478	1
12p-Amp	13q-Del	0.0479	1
MTOR	7q-Amp	0.0492	1
MTOR	17p-Del	0.0507	1
PBRM1	Del_6q26	0.051	1
12p-Amp	8p-Del	0.0518	1
SETD2	16q-Amp	0.0519	1
16q-Amp	6p-Del	0.0527	1
KDM5C	7q-Amp	0.0531	1
Amp_3q26.32	Del_1q44	0.0532	1
SETD2	3q-Amp	0.0536	1
SETD2	13q-Del	0.0536	1
3q-Amp	9p-Del	0.0536	1
KDM5C	17q-Amp	0.0537	1
3p-Amp	14q-Del	0.0545	1
17q-Amp	18q-Del	0.0547	1
KDM5C	7p-Amp	0.0548	1
SMARCA4	Del_14q31.1	0.0548	1
7q-Amp	Del_1q44	0.055	1
17q-Amp	Del_4q34.3	0.0551	1
13q-Del	Del_3p21.2	0.0553	1
1p-Del	Amp_2q32.1	0.0569	1
12p-Amp	Del_2q22.1	0.057	1
KDM5C	20p-Amp	0.0572	1
12q-Amp	13q-Del	0.0573	1
12p-Amp	6p-Del	0.0574	1
9p-Del	Amp_7q31.2	0.0575	1
16q-Amp	Del_8p23.2	0.0576	1
5q-Amp	Del_2q37.3	0.0579	1
7p-Amp	Del_1q44	0.0579	1
3p-Amp	Del_2q37.3	0.0585	1
VHL	Del_16q23.3	0.0586	1
6p-Del	Amp_2q32.1	0.0591	1
16p-Amp	17p-Del	0.0592	1
Amp_17q24.3	Del_9p23	0.0594	1
KDM5C	20q-Amp	0.0595	1
9p-Del	Amp_17q24.3	0.0598	1
3q-Amp	6p-Del	0.0607	1
Amp_5q35.1	Del_1q44	0.061	1
SYNE1	VHL	0.0612	1
16p-Amp	14q-Del	0.0615	1
20p-Amp	Del_2q37.3	0.0616	1
12q-Amp	8p-Del	0.0631	1
7p-Amp	Del_9p23	0.0652	1
3p-Amp	Del_1q44	0.0654	1
20q-Amp	Del_2q37.3	0.0659	1
12q-Amp	1p-Del	0.0661	1
PCF11	Del_3p21.2	0.0662	1
Del_1q44	Del_3p12.2	0.0673	1
KDM5C	16p-Amp	0.0679	1
3p-Amp	Del_13q13.2	0.0691	1
SMARCA4	14q-Del	0.0696	1
14q-Del	Amp_3q26.32	0.0696	1
7q-Amp	Del_8p23.2	0.0707	1
2q-Amp	1p-Del	0.0712	1
TP53	Amp_17q24.3	0.0713	1
PARD6B	VHL	0.0714	1
PCK1	VHL	0.0714	1
PTEN	VHL	0.0721	1
VHL	Del_10q23.31	0.0724	1
KDM5C	17p-Amp	0.0726	1
VHL	Del_4q34.3	0.073	1
3p-Amp	6q-Del	0.0735	1
2q-Amp	6p-Del	0.0737	1
3q-Amp	Amp_5q35.1	0.0739	1
AR	VHL	0.0747	1
MTOR	3q-Amp	0.0747	1
MTOR	13q-Del	0.0747	1
3q-Amp	3q-Del	0.0747	1
17p-Del	Amp_3q26.32	0.075	1
Amp_5q35.1	Del_1p31.1	0.075	1
Del_10q23.31	Del_14q31.1	0.0788	1
GALNT7	Del_3p14.1	0.0796	1
20p-Amp	Del_2q22.1	0.0799	1
KIAA0922	Del_3p26.3	0.08	1
Amp_3q26.32	Del_1p36.31	0.0806	1
PCF11	Del_3p26.3	0.0815	1
12p-Amp	Del_1p31.1	0.0829	1
12p-Amp	9q-Del	0.0831	1
20q-Amp	Del_2q22.1	0.0845	1
20p-Amp	Del_14q31.1	0.0855	1
9q-Del	Amp_3q26.32	0.0858	1
3p-Amp	17p-Del	0.0859	1
STAG2	Del_3p14.1	0.086	1
Amp_2q32.1	Del_1q44	0.086	1
KDM5C	Amp_3q26.32	0.0878	1
Amp_5q35.1	Del_2q22.1	0.088	1
16p-Amp	Del_9p23	0.0881	1
KDM5C	16q-Amp	0.0883	1
ARID1A	Del_1p31.1	0.0887	1
STAG2	17p-Amp	0.089	1
Amp_2q32.1	Del_6q26	0.0911	1
17p-Del	Amp_5q35.1	0.0918	1
20q-Amp	Del_14q31.1	0.0925	1
20p-Amp	Del_10q23.31	0.0931	1
Amp_7q31.2	Del_11q23.1	0.0938	1
VHL	ZNF814	0.0948	1
AR	Del_6q26	0.0952	1
PIK3CA	Del_6q26	0.0952	1
3p-Amp	9q-Del	0.0956	1
3q-Amp	Del_2q37.3	0.0962	1
MET	Del_2q37.3	0.0973	1
AR	Del_3p21.2	0.0981	1
20q-Amp	Del_10q23.31	0.0995	1
5q-Amp	Amp_17q24.3	0.0997	1
KRAS	Del_3p21.2	0.101	1
NTRK3	Del_3p21.2	0.101	1
SETD2	3p-Amp	0.101	1
7p-Amp	Del_9p21.3	0.102	1
17p-Del	Del_3p14.1	0.103	1
ATM	Amp_17q24.3	0.104	1
MTOR	12p-Amp	0.104	1
12p-Amp	3q-Del	0.104	1
2q-Amp	Del_1q44	0.104	1
NF2	Amp_7q31.2	0.106	1
PBRM1	RAI1	0.106	1
17q-Amp	5p-Amp	0.107	1
20p-Amp	Del_6q26	0.107	1
3q-Amp	Del_14q31.1	0.107	1
7q-Amp	Del_11q23.1	0.108	1
10q-Del	Del_14q31.1	0.108	1
7p-Amp	Del_11q23.1	0.111	1
Del_2q22.1	Del_3p14.1	0.111	1
AR	3p-Del	0.113	1
STAG2	3p-Del	0.113	1
3q-Amp	8p-Del	0.114	1
3q-Amp	Del_9p23	0.114	1
KRAS	Del_3p26.3	0.115	1
MTOR	3p-Amp	0.115	1
NTRK3	Del_3p26.3	0.115	1
PODXL	Del_3p26.3	0.115	1
3p-Amp	3q-Del	0.115	1
7q-Amp	Del_9p23	0.115	1
PTEN	Del_14q31.1	0.116	1
20q-Amp	Del_6q26	0.116	1
Amp_2q32.1	Del_14q31.1	0.116	1
MTOR	12q-Amp	0.117	1
MTOR	1p-Del	0.117	1
NF2	7q-Amp	0.117	1
PBRM1	Del_10q23.31	0.117	1
12q-Amp	3q-Del	0.117	1
2q-Amp	Del_6q26	0.117	1
5q-Amp	21q-Del	0.117	1
SMARCA4	Del_10q23.31	0.118	1
17p-Del	Del_14q31.1	0.118	1
KDM6A	VHL	0.12	1
NF2	7p-Amp	0.12	1
12p-Amp	1p-Del	0.12	1
20p-Amp	10q-Del	0.12	1
ALMS1	Del_1p36.31	0.121	1
SETD2	Amp_17q24.3	0.121	1
6q-Del	Amp_5q35.1	0.121	1
BCLAF1	Del_3p21.2	0.123	1
1p-Del	Amp_5q35.1	0.123	1
MET	17p-Del	0.124	1
3p-Amp	6p-Del	0.124	1
5p-Amp	21q-Del	0.124	1
MET	Del_3p14.1	0.125	1
SETD2	20p-Amp	0.125	1
14q-Del	Del_10q23.31	0.126	1
Amp_3q26.32	Del_2q37.3	0.126	1
MTOR	Del_10q23.31	0.127	1
13q-Del	Amp_3q26.32	0.127	1
Del_2q22.1	Del_14q31.1	0.127	1
ALMS1	Del_3p21.2	0.128	1
20q-Amp	10q-Del	0.128	1
Amp_5q35.1	Del_1p36.31	0.128	1
KDM5C	3q-Amp	0.129	1
BCLAF1	PBRM1	0.13	1
3p-Amp	Del_10q23.31	0.13	1
7p-Amp	Del_8p23.2	0.13	1
3p-Amp	13q-Del	0.131	1
ALMS1	Del_14q31.1	0.132	1
MTOR	20p-Amp	0.132	1
PTEN	Amp_17q24.3	0.132	1
SETD2	20q-Amp	0.132	1
20p-Amp	3q-Del	0.132	1
12q-Amp	Del_14q31.1	0.133	1
20p-Amp	Del_1p36.31	0.133	1
20p-Amp	14q-Del	0.135	1
12p-Amp	Del_8p23.2	0.136	1
Del_2q37.3	Del_14q31.1	0.136	1
MTOR	20q-Amp	0.137	1
20q-Amp	3q-Del	0.137	1
13q-Del	Del_3p12.2	0.137	1
ALMS1	3p-Del	0.139	1
ARID1A	1p-Del	0.139	1
13q-Del	Amp_2q32.1	0.139	1
CSF1R	Del_3p14.1	0.14	1
TXNIP	Amp_7q31.2	0.14	1
16p-Amp	Del_8p23.2	0.14	1
PIK3CA	7q-Amp	0.142	1
SETD2	6q-Del	0.142	1
ARID1A	6p-Del	0.143	1
20q-Amp	Del_1p36.31	0.143	1
Amp_2q32.1	Del_1p31.1	0.143	1
PIK3CA	7p-Amp	0.144	1
SMARCA4	Del_2q37.3	0.144	1
Amp_3q26.32	Del_2q22.1	0.144	1
BCLAF1	Del_3p26.3	0.145	1
20q-Amp	14q-Del	0.145	1
ATM	17q-Amp	0.146	1
16p-Amp	9q-Del	0.147	1
BRAF	Del_3p21.2	0.148	1
PTEN	14q-Del	0.148	1
ZNF438	Del_3p21.2	0.148	1
14q-Del	Amp_2q32.1	0.148	1
TP53	Amp_3q26.32	0.149	1
TXNIP	7q-Amp	0.149	1
5q-Amp	13q-Del	0.149	1
8p-Del	Amp_3q26.32	0.15	1
Amp_3q26.32	Del_13q13.2	0.15	1
GALNT7	Del_3p12.2	0.151	1
NEFH	VHL	0.151	1
NFE2L2	VHL	0.151	1
PCF11	VHL	0.151	1
TXNIP	7p-Amp	0.151	1
ALMS1	Del_1p31.1	0.153	1
PCF11	Del_6q26	0.153	1
SMARCA4	Del_1q44	0.153	1
3p-Amp	18q-Del	0.153	1
13q-Del	Del_3p14.1	0.153	1
18q-Del	Amp_3q26.32	0.153	1
ALMS1	Del_3p26.3	0.155	1
ATM	Amp_7q31.2	0.155	1
3p-Amp	10q-Del	0.155	1
3q-Amp	14q-Del	0.155	1
ALMS1	14q-Del	0.156	1
AR	6q-Del	0.156	1
PIK3CA	6q-Del	0.156	1
1p-Del	3p-Del	0.156	1
3p-Amp	Amp_5q35.1	0.157	1
5p-Amp	13q-Del	0.157	1
Amp_7q31.2	Del_9p23	0.158	1
PBRM1	WDR52	0.159	1
KDM5C	6q-Del	0.16	1
16p-Amp	9p-Del	0.16	1
Amp_7q31.2	Del_8p23.2	0.161	1
ARID1A	10q-Del	0.162	1
CUL3	12p-Amp	0.162	1
MET	13q-Del	0.162	1
12q-Amp	Del_8p23.2	0.162	1
2q-Amp	13q-Del	0.162	1
17q-Amp	18p-Del	0.163	1
20p-Amp	Del_1q44	0.163	1
7q-Amp	Del_9p21.3	0.164	1
BRAF	Del_3p26.3	0.165	1
CSF1R	3p-Del	0.165	1
KDM6A	Del_3p21.2	0.165	1
MTOR	Del_2q37.3	0.165	1
PBRM1	10q-Del	0.165	1
PCF11	Del_1p36.31	0.165	1
ZNF438	Del_3p26.3	0.165	1
3q-Amp	Del_8p23.2	0.165	1
10q-Del	14q-Del	0.165	1
GALNT7	Del_3p21.2	0.166	1
WDR52	Del_3p21.2	0.166	1
PCF11	Del_3p14.1	0.168	1
KDM6A	3p-Del	0.169	1
ATM	16p-Amp	0.171	1
MET	3p-Del	0.171	1
PARD6B	Amp_17q24.3	0.171	1
SETD2	Del_2q37.3	0.171	1
VHL	Amp_2q32.1	0.171	1
WDR52	Amp_17q24.3	0.171	1
20p-Amp	1p-Del	0.171	1
ATM	7q-Amp	0.172	1
17p-Amp	Del_11q23.1	0.172	1
20q-Amp	Del_1q44	0.172	1
14q-Del	17p-Del	0.172	1
CUL3	12q-Amp	0.173	1
KRAS	VHL	0.173	1
NOM1	VHL	0.173	1
20p-Amp	8p-Del	0.173	1
Amp_5q35.1	Del_6q26	0.173	1
ATM	7p-Amp	0.176	1
PBRM1	Del_16q23.3	0.176	1
SMARCA4	17p-Del	0.176	1
5q-Amp	Del_1p31.1	0.176	1
6q-Del	Amp_2q32.1	0.176	1
2q-Amp	Del_1p31.1	0.177	1
5q-Amp	18q-Del	0.177	1
5q-Amp	Del_13q13.2	0.177	1
CUL3	6p-Del	0.178	1
Del_3p26.3	Del_11q23.1	0.178	1
ACSF2	Del_6q26	0.179	1
ARHGAP35	Amp_7q31.2	0.179	1
ATM	17p-Amp	0.179	1
EGFR	Amp_7q31.2	0.179	1
14q-Del	Del_2q22.1	0.179	1
KDM5C	3p-Amp	0.181	1
MTOR	Del_1p31.1	0.181	1
20q-Amp	1p-Del	0.181	1
NF2	Del_10q23.31	0.182	1
TP53	Del_3p21.2	0.182	1
20q-Amp	8p-Del	0.182	1
18p-Del	Amp_3q26.32	0.183	1
MTOR	Del_13q13.2	0.184	1
7p-Amp	18q-Del	0.184	1
ARID1A	Del_1q44	0.185	1
KDM6A	Amp_5q35.1	0.185	1
Amp_3q26.32	Del_8p23.2	0.185	1
KRAS	Del_3p14.1	0.186	1
NTRK3	Del_3p14.1	0.186	1
PODXL	Del_3p14.1	0.186	1
20p-Amp	6q-Del	0.186	1
5p-Amp	Del_13q13.2	0.188	1
Del_1p31.1	Del_3p26.3	0.188	1
PBRM1	Del_11q23.1	0.189	1
PTEN	17q-Amp	0.189	1
RAI1	VHL	0.189	1
5p-Amp	Del_1p31.1	0.189	1
ARHGAP35	7q-Amp	0.19	1
EGFR	7q-Amp	0.19	1
PRKAG2	7q-Amp	0.19	1
12q-Amp	Del_1p36.31	0.19	1
GALNT7	Del_3p26.3	0.191	1
WDR52	Del_3p26.3	0.191	1
ZFYVE26	Del_3p26.3	0.191	1
12p-Amp	Del_14q31.1	0.191	1
ARHGAP35	7p-Amp	0.192	1
EGFR	7p-Amp	0.192	1
PRKAG2	7p-Amp	0.192	1
STAG2	Del_3p12.2	0.192	1
12q-Amp	Del_9p21.3	0.192	1
KDM5C	12p-Amp	0.196	1
KDM6A	Del_3p26.3	0.197	1
SETD2	Del_6q26	0.197	1
20q-Amp	6q-Del	0.197	1
5p-Amp	Amp_17q24.3	0.197	1
AR	6p-Del	0.198	1
MTOR	Amp_3q26.32	0.198	1
PIK3CA	6p-Del	0.198	1
NF2	10q-Del	0.199	1
PCF11	Del_1p31.1	0.2	1
7p-Amp	Del_4q34.3	0.2	1
14q-Del	Del_2q37.3	0.2	1
12q-Amp	14q-Del	0.201	1
3p-Amp	Del_9p23	0.201	1
5q-Amp	1p-Del	0.201	1
AR	Del_10q23.31	0.202	1
NIPBL	Del_8p23.2	0.202	1
PIK3CA	Del_10q23.31	0.202	1
STAG2	Del_10q23.31	0.202	1
RAI1	Del_14q31.1	0.204	1
ATM	16q-Amp	0.205	1
NIPBL	PBRM1	0.206	1
PCF11	3p-Del	0.206	1
STAG2	20p-Amp	0.207	1
TP53	3p-Del	0.207	1
PARD6B	17q-Amp	0.208	1
WDR52	17q-Amp	0.208	1
18q-Del	Amp_5q35.1	0.208	1
TXNIP	Amp_17q24.3	0.209	1
ARID1A	17p-Del	0.21	1
5q-Amp	18p-Del	0.21	1
PCF11	Amp_5q35.1	0.211	1
STAG2	20q-Amp	0.211	1
NFE2L2	Del_3p21.2	0.212	1
SMARCA4	VHL	0.213	1
2q-Amp	6q-Del	0.213	1
3q-Amp	13q-Del	0.213	1
5p-Amp	1p-Del	0.213	1
KDM5C	12q-Amp	0.214	1
KDM5C	1p-Del	0.214	1
KRAS	3p-Del	0.214	1
NTRK3	3p-Del	0.214	1
PODXL	3p-Del	0.214	1
PTEN	12p-Amp	0.214	1
ARID1A	5q-Amp	0.215	1
9q-Del	Amp_5q35.1	0.215	1
ALMS1	1p-Del	0.216	1
PIK3CA	Del_9p21.3	0.216	1
CSK	Del_3p21.2	0.217	1
TCEB1	Del_3p21.2	0.217	1
3q-Del	Amp_7q31.2	0.217	1
SETD2	Amp_3q26.32	0.218	1
9p-Del	Amp_3q26.32	0.218	1
KDM5C	6p-Del	0.22	1
5q-Amp	Del_10q23.31	0.22	1
AR	10q-Del	0.221	1
ARID1A	5p-Amp	0.221	1
PIK3CA	10q-Del	0.221	1
SMARCA4	13q-Del	0.221	1
STAG2	10q-Del	0.221	1
ZNF814	6p-Del	0.221	1
CUL3	Del_1q44	0.223	1
NF2	Del_1q44	0.223	1
CACNA1C	Amp_17q24.3	0.224	1
TP53	3q-Amp	0.224	1
ALMS1	Del_3p12.2	0.225	1
ALMS1	Del_8p23.2	0.225	1
ALMS1	Del_10q23.31	0.225	1
ZNF814	Del_3p12.2	0.225	1
12q-Amp	9p-Del	0.225	1
NFE2L2	6q-Del	0.227	1
PCF11	6q-Del	0.227	1
NF2	Del_13q13.2	0.228	1
TP53	Del_14q31.1	0.228	1
Del_3p12.2	Del_13q13.2	0.228	1
ADCY8	16p-Amp	0.229	1
FAT1	Del_14q31.1	0.229	1
KRAS	Amp_7q31.2	0.229	1
PODXL	Amp_7q31.2	0.229	1
WDR52	16p-Amp	0.229	1
20p-Amp	Del_1p31.1	0.229	1
CSF1R	Del_3p12.2	0.23	1
KIAA0922	Del_3p12.2	0.23	1
12p-Amp	Del_1q44	0.231	1
ARID1A	21q-Del	0.232	1
GPR50	VHL	0.232	1
NASP	VHL	0.232	1
STXBP3	VHL	0.232	1
PTEN	12q-Amp	0.233	1
RAI1	14q-Del	0.233	1
5p-Amp	Del_10q23.31	0.233	1
PIK3CA	Del_2q37.3	0.235	1
PTEN	17p-Amp	0.235	1
3q-Amp	Del_2q22.1	0.235	1
BCLAF1	VHL	0.236	1
PARD6B	17p-Amp	0.236	1
WDR52	17p-Amp	0.236	1
CSK	Del_3p26.3	0.237	1
ENO1	Del_3p26.3	0.237	1
TCEB1	Del_3p26.3	0.237	1
ZC3H3	Del_3p26.3	0.237	1
Del_3p26.3	Del_16q23.3	0.239	1
ATM	18q-Del	0.24	1
CSF1R	PBRM1	0.24	1
KIAA0922	PBRM1	0.24	1
PBRM1	PRKAG2	0.24	1
PBRM1	ZNF814	0.24	1
SETD2	17p-Del	0.24	1
KRAS	7q-Amp	0.241	1
PODXL	7q-Amp	0.241	1
NF1	12q-Amp	0.242	1
20q-Amp	Del_1p31.1	0.242	1
KRAS	7p-Amp	0.243	1
NOM1	7p-Amp	0.243	1
PODXL	7p-Amp	0.243	1
ALMS1	10q-Del	0.244	1
7q-Amp	3q-Del	0.244	1
MTOR	21q-Del	0.245	1
PIK3CA	Del_1q44	0.245	1
ZFYVE26	Del_6q26	0.245	1
BRAF	Del_3p14.1	0.246	1
EDIL3	Del_3p14.1	0.246	1
NUDT11	Del_3p14.1	0.246	1
PTEN	Del_8p23.2	0.246	1
SETD2	Del_8p23.2	0.246	1
ZNF438	Del_3p14.1	0.246	1
3q-Amp	18q-Del	0.246	1
NFE2L2	Del_3p26.3	0.247	1
TXNIP	17q-Amp	0.248	1
VHL	Del_9p21.3	0.249	1
AR	Del_3p14.1	0.25	1
NF2	17p-Del	0.25	1
20p-Amp	18p-Del	0.25	1
7p-Amp	3q-Del	0.25	1
CACNA1C	Del_9p23	0.251	1
NIPBL	8p-Del	0.251	1
PIK3CA	Del_9p23	0.251	1
KDM5C	Del_1p36.31	0.252	1
SETD2	5q-Amp	0.252	1
KDM5C	TP53	0.253	1
CSF1R	Amp_17q24.3	0.254	1
EGFR	Amp_17q24.3	0.254	1
18p-Del	Amp_5q35.1	0.255	1
ADCY8	16q-Amp	0.256	1
BCLAF1	Del_3p14.1	0.256	1
WDR52	16q-Amp	0.256	1
12p-Amp	Del_1p36.31	0.256	1
ACSF2	6q-Del	0.257	1
ARID1A	13q-Del	0.257	1
DNMT3A	6q-Del	0.257	1
FAT1	PBRM1	0.258	1
3q-Amp	Del_13q13.2	0.258	1
ALMS1	Del_2q37.3	0.259	1
GALNT7	Del_1p36.31	0.259	1
PCK1	Del_1p36.31	0.259	1
ZNF814	Del_2q37.3	0.259	1
20q-Amp	18p-Del	0.259	1
ATM	18p-Del	0.261	1
ARID1A	Del_1p36.31	0.262	1
NIPBL	Amp_3q26.32	0.262	1
KDM6A	Del_3p12.2	0.263	1
5q-Amp	10q-Del	0.263	1
SETD2	5p-Amp	0.264	1
12q-Amp	Del_1q44	0.264	1
3p-Del	Amp_2q32.1	0.264	1
SMARCA4	Del_1p31.1	0.265	1
EPS15L1	14q-Del	0.266	1
PTEN	Del_9p21.3	0.266	1
CUL3	SETD2	0.268	1
MTOR	Del_11q23.1	0.268	1
3p-Amp	9p-Del	0.268	1
DNMT3A	Del_3p21.2	0.269	1
RAI1	Del_3p21.2	0.269	1
ALMS1	Del_1q44	0.27	1
PCF11	1p-Del	0.27	1
TXNIP	16p-Amp	0.27	1
ATM	14q-Del	0.271	1
FAT1	14q-Del	0.271	1
AR	17p-Del	0.273	1
GALNT7	Del_14q31.1	0.273	1
KDM5C	Del_4q34.3	0.273	1
PCK1	Del_14q31.1	0.273	1
WDR52	Del_14q31.1	0.273	1
ZFYVE26	Del_14q31.1	0.273	1
NFE2L2	6p-Del	0.274	1
PCF11	6p-Del	0.274	1
ALMS1	8p-Del	0.275	1
ALMS1	Del_13q13.2	0.275	1
SETD2	16p-Amp	0.275	1
KDM5C	Del_2q37.3	0.276	1
5p-Amp	10q-Del	0.276	1
6p-Del	Del_3p26.3	0.276	1
Amp_2q32.1	Del_1p36.31	0.276	1
BRAF	3p-Del	0.277	1
EDIL3	3p-Del	0.277	1
TXNIP	17p-Amp	0.277	1
ZNF438	3p-Del	0.277	1
12p-Amp	14q-Del	0.278	1
12q-Amp	Del_9p23	0.278	1
Del_2q22.1	Del_3p12.2	0.278	1
KDM6A	PBRM1	0.279	1
NEFH	Del_8p23.2	0.279	1
NEFH	Del_10q23.31	0.279	1
NFE2L2	Del_8p23.2	0.279	1
PCF11	Del_8p23.2	0.279	1
CACNA1C	17q-Amp	0.282	1
MTOR	Del_1p36.31	0.282	1
STAG2	17q-Amp	0.282	1
FGFR3	Del_3p12.2	0.284	1
KRAS	Del_3p12.2	0.284	1
NTRK3	Del_3p12.2	0.284	1
PODXL	Del_3p12.2	0.284	1
3q-Amp	18p-Del	0.284	1
AR	9q-Del	0.285	1
CACNA1C	9q-Del	0.285	1
PIK3CA	9q-Del	0.285	1
3p-Amp	Del_8p23.2	0.286	1
MET	Del_8p23.2	0.287	1
TP53	14q-Del	0.288	1
12p-Amp	Del_9p21.3	0.288	1
7q-Amp	18q-Del	0.288	1
5q-Amp	Del_6q26	0.289	1
ACSF2	7q-Amp	0.29	1
CUL3	Amp_7q31.2	0.29	1
17p-Amp	Del_16q23.3	0.29	1
Amp_7q31.2	Del_16q23.3	0.29	1
CACNA1C	9p-Del	0.291	1
EPS15L1	6q-Del	0.291	1
KDM5C	Del_1q44	0.291	1
NIPBL	SETD2	0.291	1
PIK3CA	9p-Del	0.291	1
Amp_5q35.1	Del_9p21.3	0.291	1
ADCY8	VHL	0.292	1
Amp_3q26.32	Amp_5q35.1	0.292	1
Amp_17q24.3	Del_9p21.3	0.292	1
CSF1R	Del_3p21.2	0.293	1
KDM5C	MTOR	0.293	1
KIAA0922	Del_3p21.2	0.293	1
NUDT11	Amp_7q31.2	0.293	1
RILPL1	Amp_7q31.2	0.293	1
ACSF2	7p-Amp	0.294	1
KRAS	PBRM1	0.295	1
NOM1	PBRM1	0.295	1
1p-Del	Del_3p14.1	0.295	1
CSF1R	17q-Amp	0.296	1
EGFR	17q-Amp	0.296	1
ALMS1	Del_3p14.1	0.297	1
CACNA1C	21q-Del	0.297	1
KDM6A	Del_1q44	0.297	1
NF1	Del_1q44	0.297	1
PIK3CA	21q-Del	0.297	1
CDK12	16q-Amp	0.298	1
TXNIP	16q-Amp	0.298	1
ZNF814	17p-Del	0.298	1
Amp_5q35.1	Del_11q23.1	0.298	1
CUL3	13q-Del	0.299	1
KDM5C	Del_13q13.2	0.299	1
NEFH	10q-Del	0.299	1
NF1	Amp_17q24.3	0.299	1
NF2	3q-Amp	0.299	1
NF2	13q-Del	0.299	1
GALNT7	Del_1p31.1	0.3	1
PCK1	Del_1p31.1	0.3	1
SMARCB1	Del_1p31.1	0.3	1
ZFYVE26	Del_1p31.1	0.3	1
BCLAF1	3p-Del	0.301	1
MTOR	Del_2q22.1	0.301	1
WASL	Del_1p36.31	0.301	1
KDM6A	Del_13q13.2	0.302	1
NF1	Del_13q13.2	0.302	1
Del_1p31.1	Del_3p21.2	0.302	1
ZNF814	Del_3p21.2	0.303	1
Amp_7q31.2	Del_4q34.3	0.303	1
GALNT7	14q-Del	0.304	1
PCK1	14q-Del	0.304	1
WDR52	14q-Del	0.304	1
ZFYVE26	14q-Del	0.304	1
MET	Del_6q26	0.305	1
ACSF2	6p-Del	0.306	1
BRAF	7q-Amp	0.306	1
DNMT3A	6p-Del	0.306	1
NUDT11	7q-Amp	0.306	1
PCF11	Del_3p12.2	0.306	1
RILPL1	7q-Amp	0.306	1
DNMT3A	Del_3p26.3	0.307	1
MET	Del_3p12.2	0.307	1
MTOR	Amp_2q32.1	0.307	1
2q-Amp	Del_3p12.2	0.307	1
17p-Del	Del_3p12.2	0.307	1
Amp_7q31.2	Del_9p21.3	0.307	1
BRAF	7p-Amp	0.308	1
NUDT11	7p-Amp	0.308	1
RILPL1	7p-Amp	0.308	1
MET	Del_9p21.3	0.309	1
NOM1	Amp_17q24.3	0.309	1
PODXL	Amp_17q24.3	0.309	1
ACSF2	Del_10q23.31	0.311	1
DNMT3A	Del_8p23.2	0.311	1
DNMT3A	Del_10q23.31	0.311	1
ENO1	VHL	0.311	1
SLC6A14	VHL	0.311	1
TCEB1	VHL	0.311	1
VHL	ZC3H3	0.311	1
CUL3	7q-Amp	0.312	1
PARD6B	Amp_5q35.1	0.312	1
SMARCB1	Amp_5q35.1	0.312	1
WDR52	Amp_5q35.1	0.312	1
7q-Amp	Del_16q23.3	0.312	1
CUL3	Del_2q22.1	0.313	1
5p-Amp	Del_2q37.3	0.313	1
PCK1	Del_3p14.1	0.314	1
WDR52	Del_3p14.1	0.314	1
NEFH	Del_2q37.3	0.315	1
PCF11	Del_2q37.3	0.315	1
PIK3CA	16p-Amp	0.315	1
CUL3	7p-Amp	0.316	1
GLS	Del_14q31.1	0.316	1
7p-Amp	Del_16q23.3	0.316	1
SYNE1	12p-Amp	0.317	1
3p-Amp	Del_9p21.3	0.317	1
3q-Amp	5q-Amp	0.317	1
CDKN2A	Del_3p21.2	0.318	1
CXorf23	Del_3p21.2	0.318	1
DNAJA3	Del_3p21.2	0.318	1
HSPA2	Del_3p21.2	0.318	1
PAM	Del_3p21.2	0.318	1
EGFR	16p-Amp	0.319	1
PTCH1	16p-Amp	0.319	1
PTEN	8p-Del	0.319	1
PTEN	Del_9p23	0.319	1
8p-Del	Amp_2q32.1	0.319	1
Amp_2q32.1	Del_13q13.2	0.319	1
ALMS1	21q-Del	0.322	1
ARID1A	3p-Amp	0.322	1
EPS15L1	12p-Amp	0.322	1
STAG2	3q-Amp	0.323	1
5q-Amp	Del_1q44	0.324	1
CACNA1C	17p-Amp	0.325	1
CSF1R	17p-Amp	0.325	1
CSF1R	Del_3p26.3	0.325	1
EGFR	17p-Amp	0.325	1
NF1	17p-Del	0.325	1
ACSF2	Del_9p21.3	0.326	1
CSK	Del_3p14.1	0.326	1
PCF11	Del_1q44	0.326	1
SLC6A14	Del_3p14.1	0.326	1
TCEB1	Del_3p14.1	0.326	1
20p-Amp	Del_8p23.2	0.327	1
ARID1A	PBRM1	0.329	1
ZFYVE26	6q-Del	0.329	1
MET	PBRM1	0.33	1
2q-Amp	Del_1p36.31	0.33	1
ACSF2	10q-Del	0.331	1
DNMT3A	10q-Del	0.331	1
NEFH	8p-Del	0.331	1
NEFH	Del_13q13.2	0.331	1
NFE2L2	8p-Del	0.331	1
NFE2L2	Del_13q13.2	0.331	1
PCF11	8p-Del	0.331	1
PCF11	Del_13q13.2	0.331	1
5q-Amp	Del_1p36.31	0.331	1
KDM5C	17p-Del	0.333	1
CACNA1C	Amp_7q31.2	0.335	1
PIK3CA	Amp_7q31.2	0.335	1
EPS15L1	12q-Amp	0.336	1
PTCH1	Del_6q26	0.336	1
AR	Del_2q22.1	0.337	1
MTOR	2q-Amp	0.337	1
7q-Amp	Del_4q34.3	0.337	1
2q-Amp	Del_2q37.3	0.339	1
CDKN2A	Del_3p26.3	0.34	1
CXorf23	Del_3p26.3	0.34	1
DNAJA3	Del_3p26.3	0.34	1
HSPA2	Del_3p26.3	0.34	1
PAM	Del_3p26.3	0.34	1
EPS15L1	6p-Del	0.341	1
20q-Amp	Del_8p23.2	0.341	1
KDM6A	SETD2	0.343	1
SYNE1	12q-Amp	0.343	1
NIPBL	18q-Del	0.344	1
EPS15L1	Del_10q23.31	0.346	1
ACSF2	Del_2q37.3	0.347	1
DNMT3A	Del_2q37.3	0.347	1
EGFR	16q-Amp	0.347	1
GLS	14q-Del	0.347	1
PTCH1	16q-Amp	0.347	1
WASL	14q-Del	0.347	1
SETD2	12p-Amp	0.348	1
ZNF814	Del_3p26.3	0.348	1
12p-Amp	9p-Del	0.348	1
ALMS1	13q-Del	0.349	1
KDM6A	Del_3p14.1	0.349	1
ARHGAP35	Del_1p36.31	0.35	1
BRAF	Del_3p12.2	0.35	1
EDIL3	Del_3p12.2	0.35	1
KDM6A	21q-Del	0.35	1
MYF6	Del_3p12.2	0.35	1
NUDT11	Del_3p12.2	0.35	1
ZNF438	Del_3p12.2	0.35	1
5p-Amp	Del_1p36.31	0.35	1
6p-Del	Del_3p21.2	0.35	1
EPS15L1	20p-Amp	0.351	1
SMARCA4	Del_3p21.2	0.351	1
3p-Amp	Del_2q22.1	0.351	1
NOM1	17q-Amp	0.352	1
PODXL	17q-Amp	0.352	1
SETD2	Del_1q44	0.353	1
PBRM1	Del_9p21.3	0.354	1
NEFH	17p-Del	0.355	1
PCF11	17p-Del	0.355	1
3q-Amp	Del_9p21.3	0.355	1
EPS15L1	20q-Amp	0.356	1
MET	Del_1q44	0.356	1
PIK3CA	16q-Amp	0.356	1
CACNA1C	7q-Amp	0.357	1
CSK	3p-Del	0.358	1
DNMT3A	Del_1q44	0.358	1
ENO1	3p-Del	0.358	1
TCEB1	3p-Del	0.358	1
3p-Del	Amp_Xq11.2	0.358	1
CDK12	VHL	0.359	1
GALNT7	3p-Del	0.36	1
PCK1	3p-Del	0.36	1
WDR52	3p-Del	0.36	1
ADCY8	12p-Amp	0.361	1
BCLAF1	Del_9p21.3	0.361	1
EPS15L1	Del_9p21.3	0.361	1
NF1	17q-Amp	0.361	1
PCF11	5q-Amp	0.361	1
Amp_2q32.1	Del_3p14.1	0.361	1
BRAF	PBRM1	0.362	1
CACNA1C	7p-Amp	0.362	1
GPR50	PBRM1	0.362	1
NUDT11	PBRM1	0.362	1
PBRM1	RILPL1	0.362	1
PBRM1	STXBP3	0.362	1
Amp_17q24.3	Del_4q34.3	0.362	1
ALMS1	Del_2q22.1	0.363	1
ZNF814	Del_2q22.1	0.363	1
DNMT3A	8p-Del	0.364	1
DNMT3A	Del_13q13.2	0.364	1
MET	8p-Del	0.364	1
MET	Del_9p23	0.364	1
MET	Del_13q13.2	0.364	1
2q-Amp	8p-Del	0.364	1
2q-Amp	Del_13q13.2	0.364	1
ARID1A	6q-Del	0.365	1
EGFR	Del_14q31.1	0.365	1
CUL3	3p-Amp	0.366	1
EPS15L1	10q-Del	0.366	1
NF2	3p-Amp	0.366	1
NIPBL	18p-Del	0.366	1
PCF11	5p-Amp	0.367	1
Amp_2q32.1	Del_11q23.1	0.367	1
KDM5C	21q-Del	0.369	1
ALMS1	18q-Del	0.37	1
9q-Del	Amp_2q32.1	0.371	1
PCF11	SETD2	0.373	1
SETD2	Del_2q22.1	0.373	1
SMARCA4	1p-Del	0.373	1
PTEN	Amp_5q35.1	0.374	1
ADCY8	12q-Amp	0.375	1
CSK	Amp_7q31.2	0.375	1
GALNT7	1p-Del	0.375	1
NOM1	16p-Amp	0.375	1
PCK1	1p-Del	0.375	1
SLC6A14	Amp_7q31.2	0.375	1
SMARCB1	1p-Del	0.375	1
TCEB1	Amp_7q31.2	0.375	1
ZFYVE26	1p-Del	0.375	1
5p-Amp	18q-Del	0.375	1
7p-Amp	18p-Del	0.375	1
ARHGAP33	Amp_17q24.3	0.376	1
KDM6A	13q-Del	0.376	1
NF1	13q-Del	0.376	1
RIMBP3	Amp_17q24.3	0.376	1
ZNF521	Amp_17q24.3	0.376	1
9p-Del	Amp_5q35.1	0.377	1
ALMS1	Del_6q26	0.379	1
PCF11	21q-Del	0.379	1
ZNF814	Del_6q26	0.379	1
PCK1	6p-Del	0.38	1
SMARCA4	6p-Del	0.38	1
ZFYVE26	6p-Del	0.38	1
PTEN	SETD2	0.381	1
PTEN	9p-Del	0.381	1
SETD2	Amp_2q32.1	0.381	1
WASL	Del_3p14.1	0.381	1
EPS15L1	Del_2q37.3	0.382	1
NOM1	17p-Amp	0.382	1
PODXL	17p-Amp	0.382	1
18q-Del	Amp_17q24.3	0.382	1
FGFR3	Del_3p21.2	0.383	1
PODXL	Del_3p21.2	0.383	1
PTEN	Del_3p21.2	0.384	1
Amp_2q32.1	Del_3p21.2	0.384	1
ADCY8	Amp_7q31.2	0.385	1
GALNT7	Del_8p23.2	0.385	1
PARD6B	Del_8p23.2	0.385	1
PARD6B	Del_10q23.31	0.385	1
PCK1	Del_8p23.2	0.385	1
PCK1	Del_10q23.31	0.385	1
SMARCB1	Del_8p23.2	0.385	1
WDR52	Del_8p23.2	0.385	1
ZFYVE26	Del_8p23.2	0.385	1
ZFYVE26	Del_10q23.31	0.385	1
SETD2	12q-Amp	0.386	1
ACSF2	17p-Del	0.387	1
DNMT3A	17p-Del	0.387	1
CSK	7q-Amp	0.388	1
CUL3	Del_1p31.1	0.388	1
FAT1	Del_10q23.31	0.388	1
SLC6A14	7q-Amp	0.388	1
SMARCA4	Del_8p23.2	0.388	1
TCEB1	7q-Amp	0.388	1
ADCY8	20p-Amp	0.39	1
CSK	7p-Amp	0.39	1
CUL3	Del_3p21.2	0.39	1
KDM6A	Del_2q22.1	0.39	1
PIK3CA	3p-Amp	0.39	1
SLC6A14	7p-Amp	0.39	1
STAG2	3p-Amp	0.39	1
TCEB1	7p-Amp	0.39	1
WDR52	20p-Amp	0.39	1
Del_3p21.2	Del_16q23.3	0.39	1
ALMS1	18p-Del	0.392	1
ARHGAP35	Del_1p31.1	0.393	1
CUL3	VHL	0.393	1
DNMT3A	5q-Amp	0.393	1
EPS15L1	Del_1q44	0.393	1
KRAS	Del_6q26	0.393	1
NF2	VHL	0.393	1
NOM1	Del_6q26	0.393	1
RAI1	5q-Amp	0.393	1
KDM5C	Amp_2q32.1	0.394	1
TP53	Del_3p14.1	0.394	1
ADCY8	20q-Amp	0.395	1
ATM	20p-Amp	0.395	1
WDR52	20q-Amp	0.395	1
Del_3p26.3	Del_13q13.2	0.395	1
12p-Amp	Del_9p23	0.396	1
EGFR	14q-Del	0.397	1
2q-Amp	Del_11q23.1	0.397	1
3p-Amp	8p-Del	0.398	1
Del_2q37.3	Del_3p21.2	0.398	1
BCLAF1	Del_9p23	0.399	1
DNMT3A	5p-Amp	0.399	1
EPS15L1	Del_9p23	0.399	1
EPS15L1	Del_13q13.2	0.399	1
ADCY8	Del_9p21.3	0.4	1
PCK1	Del_9p21.3	0.4	1
ARID1A	TP53	0.402	1
ATM	20q-Amp	0.403	1
ADCY8	7q-Amp	0.404	1
CDK12	12p-Amp	0.404	1
FAM178A	12p-Amp	0.404	1
NOM1	16q-Amp	0.404	1
SYNE1	17q-Amp	0.404	1
TXNIP	12p-Amp	0.404	1
ATM	MTOR	0.405	1
CSF1R	Amp_5q35.1	0.405	1
DNMT3A	SETD2	0.405	1
EGFR	Amp_5q35.1	0.405	1
KIAA0922	Amp_5q35.1	0.405	1
PARD6B	10q-Del	0.405	1
PCK1	10q-Del	0.405	1
PRKAG2	Amp_5q35.1	0.405	1
RAI1	SETD2	0.405	1
ZFYVE26	10q-Del	0.405	1
3p-Del	Del_13q13.2	0.405	1
NEFH	13q-Del	0.406	1
NF1	17p-Amp	0.406	1
NFE2L2	3q-Amp	0.406	1
NFE2L2	13q-Del	0.406	1
PCF11	13q-Del	0.406	1
Amp_5q35.1	Del_16q23.3	0.406	1
FGFR3	Del_1p36.31	0.407	1
KRAS	Del_1p36.31	0.407	1
NTRK3	Del_1p36.31	0.407	1
SLC23A1	Del_1p36.31	0.407	1
VHL	2q-Amp	0.407	1
Del_2q37.3	Del_3p26.3	0.407	1
ADCY8	7p-Amp	0.408	1
ALMS1	7q-Amp	0.408	1
FAT1	Del_3p26.3	0.408	1
KDM5C	13q-Del	0.408	1
NFE2L2	Del_3p14.1	0.408	1
PTEN	Amp_2q32.1	0.408	1
SMARCA4	Del_3p26.3	0.408	1
Del_1p36.31	Del_3p26.3	0.408	1
BCLAF1	Del_3p12.2	0.409	1
EPS15L1	Del_3p12.2	0.409	1
ARID1A	12p-Amp	0.411	1
ACSF2	21q-Del	0.412	1
ALMS1	7p-Amp	0.412	1
DNMT3A	21q-Del	0.412	1
2q-Amp	14q-Del	0.415	1
CXorf23	VHL	0.416	1
DNAJA3	VHL	0.416	1
FGFR3	Del_3p26.3	0.416	1
HSPA2	VHL	0.416	1
KIF16B	VHL	0.416	1
MET	9q-Del	0.416	1
PAM	VHL	0.416	1
VCL	VHL	0.416	1
16q-Amp	Del_4q34.3	0.416	1
2q-Amp	9q-Del	0.416	1
PARD6B	Del_3p21.2	0.417	1
PCK1	Del_3p21.2	0.417	1
SMARCB1	Del_3p21.2	0.417	1
ZFYVE26	Del_3p21.2	0.417	1
FAT1	10q-Del	0.418	1
SMARCA4	10q-Del	0.418	1
ARHGAP33	17q-Amp	0.419	1
CDK12	12q-Amp	0.419	1
FAM178A	12q-Amp	0.419	1
RIMBP3	17q-Amp	0.419	1
TXNIP	12q-Amp	0.419	1
WASL	1p-Del	0.419	1
ZNF521	17q-Amp	0.419	1
NEFH	Del_2q22.1	0.42	1
PCF11	Del_2q22.1	0.42	1
KDM6A	Del_6q26	0.421	1
PARD6B	Del_2q37.3	0.421	1
PCK1	Del_2q37.3	0.421	1
ZFYVE26	Del_2q37.3	0.421	1
ARHGAP35	6q-Del	0.422	1
EPS15L1	17p-Del	0.422	1
FGFR3	Del_14q31.1	0.422	1
KIAA0922	6q-Del	0.422	1
NOM1	Del_14q31.1	0.422	1
NTRK3	Del_14q31.1	0.422	1
PODXL	Del_14q31.1	0.422	1
PTCH1	6q-Del	0.422	1
ARID1A	Del_4q34.3	0.423	1
FAM178A	6p-Del	0.423	1
KDM5C	MET	0.423	1
KDM5C	2q-Amp	0.423	1
5q-Amp	9q-Del	0.423	1
AR	Del_1p31.1	0.424	1
NIPBL	Del_1p31.1	0.424	1
PIK3CA	Del_1p31.1	0.424	1
MET	SETD2	0.426	1
MET	9p-Del	0.426	1
SETD2	2q-Amp	0.426	1
NEFH	18q-Del	0.427	1
FAM178A	Del_8p23.2	0.428	1
FAM178A	Del_10q23.31	0.428	1
TXNIP	Del_10q23.31	0.428	1
MET	Amp_5q35.1	0.43	1
ARID1A	12q-Amp	0.432	1
CDKN2A	Del_3p14.1	0.432	1
CSK	Del_3p12.2	0.432	1
CXorf23	Del_3p14.1	0.432	1
DNAJA3	Del_3p14.1	0.432	1
GALNT7	Del_1q44	0.432	1
HSPA2	Del_3p14.1	0.432	1
PAM	Del_3p14.1	0.432	1
PCK1	Del_1q44	0.432	1
SLC6A14	Del_3p12.2	0.432	1
SMARCB1	Del_1q44	0.432	1
TCEB1	Del_3p12.2	0.432	1
ZC3H3	Del_3p12.2	0.432	1
ZFYVE26	Del_1q44	0.432	1
FAT1	Del_6q26	0.433	1
SMARCA4	Del_6q26	0.433	1
TXNIP	20p-Amp	0.433	1
BCLAF1	9q-Del	0.434	1
16q-Amp	18p-Del	0.434	1
MET	21q-Del	0.435	1
21q-Del	Del_14q31.1	0.436	1
KIAA0922	VHL	0.437	1
MET	Amp_2q32.1	0.437	1
PRKAG2	VHL	0.437	1
PTEN	2q-Amp	0.437	1
ADCY8	Del_9p23	0.438	1
DNMT3A	13q-Del	0.438	1
GALNT7	8p-Del	0.438	1
GALNT7	Del_13q13.2	0.438	1
PARD6B	8p-Del	0.438	1
PARD6B	Del_13q13.2	0.438	1
PCK1	8p-Del	0.438	1
PCK1	Del_9p23	0.438	1
PCK1	Del_13q13.2	0.438	1
SMARCB1	8p-Del	0.438	1
SMARCB1	Del_13q13.2	0.438	1
TXNIP	20q-Amp	0.438	1
ZFYVE26	8p-Del	0.438	1
ZFYVE26	Del_13q13.2	0.438	1
Amp_2q32.1	Del_3p12.2	0.438	1
KDM5C	18q-Del	0.439	1
NF1	Amp_7q31.2	0.439	1
BCLAF1	SETD2	0.44	1
BCLAF1	9p-Del	0.44	1
EPS15L1	9p-Del	0.44	1
KDM5C	Del_6q26	0.44	1
PIK3CA	Del_3p12.2	0.44	1
12p-Amp	Amp_5q35.1	0.441	1
AR	Amp_5q35.1	0.442	1
ARHGAP33	16p-Amp	0.442	1
NIPBL	Amp_5q35.1	0.442	1
NUDT11	16p-Amp	0.442	1
RIMBP3	16p-Amp	0.442	1
CUL3	Del_3p26.3	0.443	1
KDM6A	Del_1p36.31	0.443	1
WASL	Del_9p21.3	0.443	1
CSK	PBRM1	0.444	1
ENO1	PBRM1	0.444	1
PBRM1	TCEB1	0.444	1
ACSF2	VHL	0.445	1
PTEN	3p-Del	0.445	1
ARID1A	Del_10q23.31	0.447	1
EPS15L1	Amp_17q24.3	0.447	1
FAM178A	10q-Del	0.448	1
NEFH	18p-Del	0.448	1
TXNIP	10q-Del	0.448	1
ADCY8	Amp_3q26.32	0.449	1
ARHGAP33	17p-Amp	0.449	1
FGFR3	Del_1p31.1	0.449	1
GALNT7	Amp_3q26.32	0.449	1
KRAS	Del_1p31.1	0.449	1
NTRK3	Del_1p31.1	0.449	1
PARD6B	Amp_3q26.32	0.449	1
PBRM1	SYNE1	0.449	1
RIMBP3	17p-Amp	0.449	1
SLC23A1	Del_1p31.1	0.449	1
ZNF521	17p-Amp	0.449	1
NIPBL	VHL	0.45	1
STAG2	VHL	0.45	1
ACSF2	Del_2q22.1	0.451	1
DNMT3A	Del_2q22.1	0.451	1
Amp_2q32.1	Del_3p26.3	0.452	1
ARHGAP35	12p-Amp	0.453	1
CSF1R	12p-Amp	0.453	1
EGFR	12p-Amp	0.453	1
FGFR3	14q-Del	0.453	1
KIAA0922	12p-Amp	0.453	1
NOM1	14q-Del	0.453	1
NTRK3	14q-Del	0.453	1
PODXL	14q-Del	0.453	1
5p-Amp	Del_6q26	0.453	1
ARID1A	20p-Amp	0.454	1
WASL	Amp_7q31.2	0.454	1
NIPBL	Del_3p21.2	0.457	1
ACSF2	18q-Del	0.458	1
CSK	Amp_17q24.3	0.458	1
ENO1	Amp_17q24.3	0.458	1
PARD6B	Del_3p26.3	0.458	1
PCK1	Del_3p26.3	0.458	1
SMARCB1	Del_3p26.3	0.458	1
TCEB1	Amp_17q24.3	0.458	1
BRAF	Del_6q26	0.459	1
EDIL3	Del_6q26	0.459	1
NUDT11	Del_6q26	0.459	1
ZNF438	Del_6q26	0.459	1
ARHGAP35	Del_3p14.1	0.46	1
ARID1A	7p-Amp	0.46	1
ATM	Del_1p36.31	0.46	1
GALNT7	17p-Del	0.46	1
KIAA0922	Del_3p14.1	0.46	1
PARD6B	17p-Del	0.46	1
PCK1	17p-Del	0.46	1
PTCH1	Del_3p14.1	0.46	1
SMARCA4	Del_1p36.31	0.46	1
SMARCB1	17p-Del	0.46	1
ZFYVE26	17p-Del	0.46	1
18p-Del	Amp_17q24.3	0.46	1
FGFR3	Amp_5q35.1	0.461	1
KRAS	Amp_5q35.1	0.461	1
NTRK3	Amp_5q35.1	0.461	1
PODXL	Amp_5q35.1	0.461	1
ARID1A	20q-Amp	0.462	1
MET	6q-Del	0.462	1
NF1	7q-Amp	0.462	1
3p-Amp	5q-Amp	0.462	1
CDKN2A	3p-Del	0.463	1
CXorf23	3p-Del	0.463	1
DNAJA3	3p-Del	0.463	1
HSPA2	3p-Del	0.463	1
PAM	3p-Del	0.463	1
ATM	Del_11q23.1	0.464	1
FAM178A	Del_2q37.3	0.464	1
GLS	Del_2q37.3	0.464	1
NF1	Del_14q31.1	0.464	1
3p-Del	Del_1p31.1	0.464	1
PBRM1	PTEN	0.465	1
ADAM28	Del_3p21.2	0.466	1
C9orf171	Del_3p21.2	0.466	1
FAT1	Del_13q13.2	0.466	1
MET	2q-Amp	0.466	1
PARD6B	5q-Amp	0.466	1
PCK1	5q-Amp	0.466	1
PRODH	Del_3p21.2	0.466	1
SCYL1	Del_3p21.2	0.466	1
SLC1A7	Del_3p21.2	0.466	1
SMARCA4	8p-Del	0.466	1
SMARCA4	Del_9p23	0.466	1
SMARCA4	Del_13q13.2	0.466	1
WDR52	5q-Amp	0.466	1
ZFYVE26	5q-Amp	0.466	1
ARHGAP35	12q-Amp	0.467	1
ARHGAP35	1p-Del	0.467	1
CSF1R	12q-Amp	0.467	1
EGFR	12q-Amp	0.467	1
EGFR	1p-Del	0.467	1
KIAA0922	12q-Amp	0.467	1
NEFH	Del_6q26	0.467	1
NF1	7p-Amp	0.467	1
NFE2L2	3p-Del	0.467	1
NFE2L2	Del_6q26	0.467	1
PRKAG2	1p-Del	0.467	1
PTCH1	1p-Del	0.467	1
20p-Amp	6p-Del	0.468	1
AR	TP53	0.469	1
SETD2	9p-Del	0.469	1
3p-Del	6p-Del	0.469	1
ADCY8	Del_3p12.2	0.47	1
ARHGAP33	16q-Amp	0.47	1
NUDT11	16q-Amp	0.47	1
PCK1	Del_3p12.2	0.47	1
RIMBP3	16q-Amp	0.47	1
SMARCB1	Del_3p12.2	0.47	1
WDR52	Del_3p12.2	0.47	1
ZFYVE26	Del_3p12.2	0.47	1
NFE2L2	3p-Amp	0.471	1
ADCY8	9q-Del	0.472	1
ARHGAP35	6p-Del	0.472	1
EGFR	6p-Del	0.472	1
EPS15L1	13q-Del	0.472	1
GALNT7	9q-Del	0.472	1
KDM5C	18p-Del	0.472	1
KIAA0922	6p-Del	0.472	1
PARD6B	5p-Amp	0.472	1
PCK1	5p-Amp	0.472	1
PCK1	9q-Del	0.472	1
PRKAG2	6p-Del	0.472	1
PTCH1	6p-Del	0.472	1
WASL	7q-Amp	0.472	1
WDR52	5p-Amp	0.472	1
ZFYVE26	5p-Amp	0.472	1
ACSF2	Del_3p14.1	0.473	1
DNMT3A	Del_3p14.1	0.473	1
EDIL3	Del_1p36.31	0.473	1
NUDT11	Del_1p36.31	0.473	1
RAI1	Del_3p14.1	0.473	1
STXBP3	Del_1p36.31	0.473	1
ZNF438	Del_1p36.31	0.473	1
Amp_3q26.32	Del_9p23	0.474	1
FAM178A	Del_1q44	0.475	1
TXNIP	Del_1q44	0.475	1
WASL	Del_1q44	0.475	1
3p-Amp	5p-Amp	0.475	1
ARHGAP35	Del_10q23.31	0.476	1
EGFR	Del_10q23.31	0.476	1
KIAA0922	Del_8p23.2	0.476	1
KIAA0922	Del_10q23.31	0.476	1
PRKAG2	Del_8p23.2	0.476	1
PRKAG2	Del_10q23.31	0.476	1
WASL	7p-Amp	0.476	1
NF2	12p-Amp	0.477	1
SYNE1	17p-Amp	0.477	1
ADCY8	SETD2	0.478	1
ADCY8	9p-Del	0.478	1
GALNT7	SETD2	0.478	1
KRAS	6q-Del	0.478	1
NOM1	6q-Del	0.478	1
PCK1	SETD2	0.478	1
PCK1	9p-Del	0.478	1
ACSF2	18p-Del	0.48	1
FAM178A	8p-Del	0.48	1
HSPA2	Amp_7q31.2	0.48	1
KLK10	Amp_7q31.2	0.48	1
RAI1	18p-Del	0.48	1
WASL	8p-Del	0.48	1
ZNF532	Amp_7q31.2	0.48	1
ARHGAP35	20p-Amp	0.481	1
CSF1R	20p-Amp	0.481	1
EGFR	20p-Amp	0.481	1
KDM5C	Del_8p23.2	0.481	1
PRKAG2	20p-Amp	0.481	1
ZNF814	Amp_5q35.1	0.481	1
ATM	Amp_3q26.32	0.483	1
ATM	PBRM1	0.484	1
PARD6B	21q-Del	0.484	1
PBRM1	SMARCA4	0.484	1
PCK1	21q-Del	0.484	1
ZFYVE26	21q-Del	0.484	1
12q-Amp	Del_4q34.3	0.484	1
20q-Amp	6p-Del	0.484	1
EPS15L1	Del_2q22.1	0.485	1
SETD2	21q-Del	0.485	1
ARHGAP35	20q-Amp	0.486	1
CSF1R	20q-Amp	0.486	1
CUL3	3q-Del	0.486	1
EGFR	20q-Amp	0.486	1
GALNT7	PBRM1	0.486	1
MTOR	Del_16q23.3	0.486	1
PBRM1	ZFYVE26	0.486	1
PRKAG2	20q-Amp	0.486	1
3q-Del	Del_16q23.3	0.486	1
ADAM28	Del_3p26.3	0.487	1
ARHGAP33	Del_14q31.1	0.487	1
ATM	Del_14q31.1	0.487	1
C9orf171	Del_3p26.3	0.487	1
EDIL3	Del_14q31.1	0.487	1
GPR50	Del_14q31.1	0.487	1
NASP	Del_14q31.1	0.487	1
NEFH	Del_3p26.3	0.487	1
NIPBL	Amp_17q24.3	0.487	1
NUDT11	Del_14q31.1	0.487	1
PIK3CA	Amp_17q24.3	0.487	1
PRODH	Del_3p26.3	0.487	1
RILPL1	Del_14q31.1	0.487	1
RIMBP3	Del_14q31.1	0.487	1
SCYL1	Del_3p26.3	0.487	1
SLC1A7	Del_3p26.3	0.487	1
SPATA13	Del_3p26.3	0.487	1
STXBP3	Del_14q31.1	0.487	1
SYNE1	Amp_17q24.3	0.487	1
NEFH	Del_1p36.31	0.488	1
AR	Del_4q34.3	0.489	1
ATM	KDM5C	0.489	1
CACNA1C	Del_4q34.3	0.489	1
FAT1	KDM5C	0.489	1
KDM5C	SMARCA4	0.489	1
ACSF2	16p-Amp	0.49	1
PTEN	Amp_7q31.2	0.49	1
KIAA0922	Del_9p21.3	0.491	1
2q-Amp	Del_3p21.2	0.491	1
HSPA2	7q-Amp	0.492	1
KLK10	7q-Amp	0.492	1
ZNF532	7q-Amp	0.492	1
ARHGAP33	Del_3p21.2	0.493	1
EDIL3	Del_3p21.2	0.493	1
NASP	Del_3p21.2	0.493	1
RILPL1	Del_3p21.2	0.493	1
12q-Amp	Amp_5q35.1	0.493	1
ALMS1	TP53	0.494	1
HSPA2	7p-Amp	0.494	1
KLK10	7p-Amp	0.494	1
MET	Del_2q22.1	0.494	1
NF2	3p-Del	0.494	1
ZNF532	7p-Amp	0.494	1
2q-Amp	Del_2q22.1	0.494	1
3p-Del	Del_16q23.3	0.494	1
ARHGAP35	10q-Del	0.496	1
EGFR	10q-Del	0.496	1
KIAA0922	10q-Del	0.496	1
PRKAG2	10q-Del	0.496	1
MTOR	TP53	0.497	1
TP53	3q-Del	0.497	1
CUL3	1p-Del	0.498	1
NF2	12q-Amp	0.498	1
12q-Amp	Del_16q23.3	0.498	1
17q-Amp	Del_11q23.1	0.498	1
ARAP3	17q-Amp	0.499	1
CSK	17q-Amp	0.499	1
ENO1	17q-Amp	0.499	1
TCEB1	17q-Amp	0.499	1
Del_3p21.2	Del_13q13.2	0.499	1
FAT1	17p-Del	0.5	1
ACSF2	3p-Amp	0.502	1
MET	16p-Amp	0.502	1
WASL	17p-Del	0.502	1
ATM	PTEN	0.503	1
ATM	Amp_2q32.1	0.503	1
KDM6A	Del_1p31.1	0.504	1
21q-Del	3q-Del	0.504	1
ALMS1	6q-Del	0.506	1
ARHGAP35	3p-Del	0.506	1
KIAA0922	3p-Del	0.506	1
PTCH1	3p-Del	0.506	1
ZNF814	6q-Del	0.506	1
ADCY8	Amp_17q24.3	0.507	1
FGFR3	12p-Amp	0.507	1
NOM1	12p-Amp	0.507	1
PODXL	12p-Amp	0.507	1
ZFYVE26	Amp_17q24.3	0.507	1
Amp_2q32.1	Del_8p23.2	0.507	1
CDK12	5q-Amp	0.508	1
WASL	Del_3p21.2	0.508	1
7q-Amp	18p-Del	0.508	1
ADCY8	3q-Amp	0.509	1
AR	MTOR	0.509	1
AR	3q-Del	0.509	1
ARID1A	Del_6q26	0.509	1
CACNA1C	MTOR	0.509	1
GALNT7	13q-Del	0.509	1
KDM5C	Del_9p21.3	0.509	1
MTOR	NIPBL	0.509	1
MTOR	PIK3CA	0.509	1
NIPBL	3q-Del	0.509	1
NIPBL	Del_3p26.3	0.509	1
PARD6B	3q-Amp	0.509	1
PARD6B	13q-Del	0.509	1
PCF11	Del_14q31.1	0.509	1
PCK1	13q-Del	0.509	1
PIK3CA	Del_3p26.3	0.509	1
SMARCB1	13q-Del	0.509	1
STAG2	3q-Del	0.509	1
WDR52	3q-Amp	0.509	1
ZFYVE26	13q-Del	0.509	1
EPS15L1	17q-Amp	0.51	1
NF1	14q-Del	0.51	1
KIAA0922	Del_2q37.3	0.511	1
PRKAG2	Del_2q37.3	0.511	1
PTCH1	Del_2q37.3	0.511	1
CUL3	Del_10q23.31	0.512	1
18q-Del	Amp_7q31.2	0.512	1
ALMS1	Del_4q34.3	0.513	1
BRAF	Del_1p31.1	0.513	1
EDIL3	Del_1p31.1	0.513	1
NUDT11	Del_1p31.1	0.513	1
PIK3CA	12p-Amp	0.513	1
STAG2	12p-Amp	0.513	1
STXBP3	Del_1p31.1	0.513	1
WASL	9q-Del	0.513	1
ZNF438	Del_1p31.1	0.513	1
ZNF814	Del_4q34.3	0.513	1
3q-Amp	Del_4q34.3	0.513	1
SETD2	14q-Del	0.515	1
20p-Amp	Del_4q34.3	0.515	1
PTEN	20p-Amp	0.516	1
3p-Del	Del_1p36.31	0.516	1
ARHGAP33	14q-Del	0.517	1
EDIL3	14q-Del	0.517	1
FAT1	5p-Amp	0.517	1
GPR50	14q-Del	0.517	1
NASP	14q-Del	0.517	1
NUDT11	14q-Del	0.517	1
RILPL1	14q-Del	0.517	1
RIMBP3	14q-Del	0.517	1
SMARCA4	9q-Del	0.517	1
STXBP3	14q-Del	0.517	1
VHL	9p-Del	0.518	1
ACSF2	Del_3p21.2	0.519	1
CUL3	17q-Amp	0.519	1
CUL3	20p-Amp	0.519	1
GLS	SETD2	0.519	1
KDM6A	TP53	0.519	1
WASL	9p-Del	0.519	1
17q-Amp	Del_16q23.3	0.519	1
ARHGAP35	Del_1q44	0.521	1
CSK	16p-Amp	0.521	1
EGFR	Del_1q44	0.521	1
FGFR3	12q-Amp	0.521	1
FGFR3	1p-Del	0.521	1
FZR1	16p-Amp	0.521	1
KIAA0922	Del_1q44	0.521	1
KRAS	1p-Del	0.521	1
NOM1	12q-Amp	0.521	1
NOM1	1p-Del	0.521	1
NTRK3	1p-Del	0.521	1
PODXL	12q-Amp	0.521	1
PRKAG2	Del_1q44	0.521	1
SLC23A1	1p-Del	0.521	1
TCEB1	16p-Amp	0.521	1
NF1	Amp_5q35.1	0.522	1
PARD6B	Del_2q22.1	0.522	1
PCK1	Del_2q22.1	0.522	1
ZFYVE26	Del_2q22.1	0.522	1
PTEN	7q-Amp	0.523	1
5p-Amp	Del_1q44	0.523	1
ARID1A	Del_13q13.2	0.524	1
ARHGAP33	Del_3p26.3	0.525	1
BRAF	Amp_5q35.1	0.525	1
CDK12	21q-Del	0.525	1
EDIL3	Del_3p26.3	0.525	1
FAM178A	21q-Del	0.525	1
GLS	21q-Del	0.525	1
GPR50	Del_3p26.3	0.525	1
KRAS	6p-Del	0.525	1
NASP	Del_3p26.3	0.525	1
NOM1	6p-Del	0.525	1
PTEN	20q-Amp	0.525	1
RILPL1	Amp_5q35.1	0.525	1
RILPL1	Del_3p26.3	0.525	1
RIMBP3	Amp_5q35.1	0.525	1
SLC23A1	6p-Del	0.525	1
TXNIP	21q-Del	0.525	1
ARID1A	KDM5C	0.526	1
EGFR	Del_13q13.2	0.526	1
KIAA0922	8p-Del	0.526	1
KIAA0922	Del_9p23	0.526	1
KIAA0922	Del_13q13.2	0.526	1
PRKAG2	8p-Del	0.526	1
PTCH1	Del_13q13.2	0.526	1
SETD2	SMARCA4	0.526	1
SMARCA4	9p-Del	0.526	1
20q-Amp	Del_4q34.3	0.526	1
ARAP3	17p-Amp	0.527	1
CSK	17p-Amp	0.527	1
CUL3	20q-Amp	0.527	1
ENO1	17p-Amp	0.527	1
FGFR3	VHL	0.527	1
FZR1	17p-Amp	0.527	1
NTRK3	VHL	0.527	1
SLC23A1	VHL	0.527	1
SLC6A14	17p-Amp	0.527	1
TCEB1	17p-Amp	0.527	1
17p-Amp	Amp_Xq11.2	0.527	1
PBRM1	9q-Del	0.528	1
ADCY8	18q-Del	0.529	1
GALNT7	18q-Del	0.529	1
PCK1	18q-Del	0.529	1
SMARCB1	18q-Del	0.529	1
WDR52	18q-Del	0.529	1
ZFYVE26	18q-Del	0.529	1
ACSF2	16q-Amp	0.53	1
AR	SYNE1	0.53	1
CSF1R	Amp_7q31.2	0.53	1
FGFR3	Del_8p23.2	0.53	1
FGFR3	Del_10q23.31	0.53	1
KRAS	Del_8p23.2	0.53	1
KRAS	Del_10q23.31	0.53	1
NIPBL	SYNE1	0.53	1
NOM1	Del_10q23.31	0.53	1
NTRK3	Del_8p23.2	0.53	1
PODXL	Del_8p23.2	0.53	1
PRKAG2	Amp_7q31.2	0.53	1
PTEN	7p-Amp	0.53	1
SLC23A1	Del_10q23.31	0.53	1
ACSF2	3p-Del	0.531	1
ATM	2q-Amp	0.531	1
DNMT3A	3p-Del	0.531	1
RAI1	3p-Del	0.531	1
16q-Amp	18q-Del	0.531	1
ALMS1	3q-Del	0.533	1
AR	1p-Del	0.533	1
MTOR	ZNF814	0.533	1
NIPBL	1p-Del	0.533	1
PIK3CA	12q-Amp	0.533	1
PIK3CA	1p-Del	0.533	1
STAG2	12q-Amp	0.533	1
ZNF814	3q-Del	0.533	1
2q-Amp	3p-Del	0.533	1
CDKN2A	Del_3p12.2	0.534	1
CUL3	Del_9p21.3	0.534	1
CXorf23	Del_3p12.2	0.534	1
DNAJA3	Del_3p12.2	0.534	1
HSPA2	Del_3p12.2	0.534	1
NOM1	20p-Amp	0.534	1
PAM	Del_3p12.2	0.534	1
PODXL	20p-Amp	0.534	1
FAT1	21q-Del	0.535	1
SMARCA4	21q-Del	0.535	1
14q-Del	21q-Del	0.535	1
DNMT3A	Del_1p36.31	0.536	1
RAI1	Del_1p36.31	0.536	1
TXNIP	Del_3p12.2	0.536	1
WASL	Del_3p12.2	0.536	1
ARAP3	Del_6q26	0.537	1
ARHGAP35	Amp_3q26.32	0.537	1
ATM	Del_1p31.1	0.537	1
CSF1R	Amp_3q26.32	0.537	1
EGFR	Amp_3q26.32	0.537	1
KIAA0922	Amp_3q26.32	0.537	1
PRKAG2	Amp_3q26.32	0.537	1
PTCH1	Amp_3q26.32	0.537	1
TCEB1	Del_6q26	0.537	1
ZC3H3	Del_6q26	0.537	1
Amp_Xq11.2	Del_6q26	0.537	1
16p-Amp	Del_4q34.3	0.538	1
NOM1	20q-Amp	0.539	1
PODXL	20q-Amp	0.539	1
5q-Amp	6p-Del	0.539	1
BRAF	6q-Del	0.54	1
EDIL3	6q-Del	0.54	1
NUDT11	6q-Del	0.54	1
SETD2	Amp_5q35.1	0.54	1
STAG2	6p-Del	0.54	1
STXBP3	6q-Del	0.54	1
ZNF438	6q-Del	0.54	1
CUL3	10q-Del	0.541	1
CUL3	Del_11q23.1	0.542	1
FAT1	Del_3p21.2	0.542	1
VHL	Del_9p23	0.543	1
ZNF814	Del_3p14.1	0.543	1
CDKN2A	PBRM1	0.544	1
CXorf23	PBRM1	0.544	1
DNAJA3	PBRM1	0.544	1
EPS15L1	Del_3p14.1	0.544	1
KIF16B	PBRM1	0.544	1
KRAS	Del_9p21.3	0.544	1
NOM1	Del_9p21.3	0.544	1
NTRK3	Del_9p21.3	0.544	1
PAM	PBRM1	0.544	1
PTEN	Del_3p14.1	0.544	1
SLC23A1	Del_9p21.3	0.544	1
Amp_3q26.32	Del_9p21.3	0.545	1
KDM6A	6q-Del	0.546	1
NEFH	TP53	0.546	1
PCF11	TP53	0.546	1
CACNA1C	Del_8p23.2	0.547	1
CSF1R	7q-Amp	0.547	1
CSK	16q-Amp	0.547	1
EGFR	17p-Del	0.547	1
FZR1	16q-Amp	0.547	1
KIAA0922	17p-Del	0.547	1
PRKAG2	17p-Del	0.547	1
PTCH1	17p-Del	0.547	1
TCEB1	16q-Amp	0.547	1
WASL	Del_3p26.3	0.547	1
16q-Amp	Amp_Xq11.2	0.547	1
FGFR3	10q-Del	0.548	1
FGFR3	Del_3p14.1	0.548	1
KRAS	10q-Del	0.548	1
NEFH	Del_1p31.1	0.548	1
NOM1	10q-Del	0.548	1
SLC23A1	10q-Del	0.548	1
Amp_3q26.32	Del_11q23.1	0.548	1
ADCY8	18p-Del	0.549	1
CDK12	3q-Amp	0.549	1
GALNT7	18p-Del	0.549	1
PCK1	18p-Del	0.549	1
SMARCB1	18p-Del	0.549	1
TXNIP	3q-Amp	0.549	1
WDR52	18p-Del	0.549	1
ZFYVE26	18p-Del	0.549	1
ARAP3	Del_1p36.31	0.55	1
FZR1	Del_1p36.31	0.55	1
PIK3CA	3p-Del	0.55	1
TCEB1	Del_1p36.31	0.55	1
CSF1R	7p-Amp	0.551	1
MTOR	Del_8p23.2	0.551	1
EPS15L1	17p-Amp	0.552	1
FAM178A	PBRM1	0.552	1
GLS	PBRM1	0.552	1
PBRM1	TXNIP	0.552	1
13q-Del	3q-Del	0.552	1
ALMS1	SYNE1	0.553	1
CSF1R	5q-Amp	0.553	1
EGFR	5q-Amp	0.553	1
KIAA0922	5q-Amp	0.553	1
MET	6p-Del	0.553	1
PCF11	14q-Del	0.553	1
PRKAG2	5q-Amp	0.553	1
SYNE1	ZNF814	0.553	1
5q-Amp	Amp_3q26.32	0.553	1
5q-Amp	Del_2q22.1	0.553	1
NIPBL	20p-Amp	0.554	1
PBRM1	9p-Del	0.554	1
PIK3CA	20p-Amp	0.554	1
5q-Amp	6q-Del	0.554	1
SETD2	8p-Del	0.555	1
TP53	Amp_7q31.2	0.555	1
DNMT3A	Del_14q31.1	0.556	1
CXorf23	Amp_17q24.3	0.557	1
ECHDC2	Amp_17q24.3	0.557	1
HSPA2	Amp_17q24.3	0.557	1
KDM6A	MTOR	0.557	1
KDM6A	3q-Del	0.557	1
KIF16B	Amp_17q24.3	0.557	1
KLK10	Amp_17q24.3	0.557	1
VCL	Amp_17q24.3	0.557	1
ZNF532	Amp_17q24.3	0.557	1
ADAM28	VHL	0.558	1
C9orf171	VHL	0.558	1
CARKD	VHL	0.558	1
CDCA8	VHL	0.558	1
CSF1R	5p-Amp	0.558	1
DPYSL4	VHL	0.558	1
EGFR	5p-Amp	0.558	1
INPP5E	VHL	0.558	1
KIAA0922	5p-Amp	0.558	1
KIAA0922	9q-Del	0.558	1
NEK8	VHL	0.558	1
PRKAG2	5p-Amp	0.558	1
PRODH	VHL	0.558	1
SCYL1	VHL	0.558	1
SLC1A7	VHL	0.558	1
SMARCA4	Amp_5q35.1	0.558	1
SPATA13	VHL	0.558	1
2q-Amp	Del_3p26.3	0.558	1
16p-Amp	Del_16q23.3	0.56	1
ACSF2	Amp_7q31.2	0.561	1
ARID1A	Del_14q31.1	0.561	1
KDM5C	Del_1p31.1	0.561	1
MET	16q-Amp	0.561	1
NIPBL	20q-Amp	0.561	1
PIK3CA	20q-Amp	0.561	1
SETD2	1p-Del	0.561	1
TXNIP	Del_2q22.1	0.561	1
MET	Del_10q23.31	0.562	1
2q-Amp	Del_8p23.2	0.562	1
2q-Amp	Del_10q23.31	0.562	1
ARAP3	Del_14q31.1	0.563	1
CSK	Del_14q31.1	0.563	1
ENO1	Del_14q31.1	0.563	1
FZR1	Del_14q31.1	0.563	1
KRAS	Del_2q37.3	0.563	1
NF2	Del_2q37.3	0.563	1
PIK3CA	Del_11q23.1	0.563	1
SLC23A1	Del_2q37.3	0.563	1
SLC6A14	Del_14q31.1	0.563	1
TCEB1	Del_14q31.1	0.563	1
ZC3H3	Del_14q31.1	0.563	1
3p-Del	Del_2q37.3	0.563	1
EGFR	SETD2	0.564	1
KIAA0922	9p-Del	0.564	1
NEFH	Del_4q34.3	0.564	1
NIPBL	17q-Amp	0.564	1
PIK3CA	17q-Amp	0.564	1
PRKAG2	SETD2	0.564	1
ACSF2	Del_3p26.3	0.565	1
NEFH	Amp_5q35.1	0.565	1
NFE2L2	Amp_5q35.1	0.565	1
RAI1	Del_3p26.3	0.565	1
ARID1A	MET	0.566	1
ARID1A	2q-Amp	0.566	1
CUL3	KDM5C	0.566	1
KDM5C	NF2	0.566	1
ADCY8	17q-Amp	0.567	1
EPS15L1	Del_6q26	0.567	1
GALNT7	17q-Amp	0.567	1
ZFYVE26	17q-Amp	0.567	1
5p-Amp	Del_2q22.1	0.567	1
AR	Del_9p21.3	0.568	1
CACNA1C	Del_9p21.3	0.568	1
CDK12	18q-Del	0.568	1
NASP	12p-Amp	0.568	1
NUDT11	12p-Amp	0.568	1
WASL	18q-Del	0.568	1
ADCY8	3p-Amp	0.569	1
ARHGAP35	21q-Del	0.569	1
CSF1R	21q-Del	0.569	1
EGFR	21q-Del	0.569	1
KIAA0922	21q-Del	0.569	1
MET	3p-Amp	0.569	1
PARD6B	3p-Amp	0.569	1
PTCH1	21q-Del	0.569	1
WDR52	3p-Amp	0.569	1
ZFYVE26	3p-Amp	0.569	1
ADAM28	Del_3p14.1	0.571	1
C9orf171	Del_3p14.1	0.571	1
CARKD	Del_3p14.1	0.571	1
PRODH	Del_3p14.1	0.571	1
SCYL1	Del_3p14.1	0.571	1
SETD2	Del_14q31.1	0.571	1
SLC1A7	Del_3p14.1	0.571	1
SPATA13	Del_3p14.1	0.571	1
TP53	Del_3p12.2	0.571	1
20p-Amp	18q-Del	0.571	1
ATM	3q-Amp	0.572	1
ATM	13q-Del	0.572	1
CUL3	17p-Amp	0.572	1
FAT1	3q-Amp	0.572	1
FAT1	13q-Del	0.572	1
FGFR3	Del_1q44	0.572	1
KRAS	Del_1q44	0.572	1
NF2	17p-Amp	0.572	1
NOM1	Del_1q44	0.572	1
NTRK3	Del_1q44	0.572	1
SLC23A1	Del_1q44	0.572	1
NF1	VHL	0.574	1
ACSF2	TP53	0.575	1
DNMT3A	TP53	0.575	1
KDM5C	8p-Del	0.575	1
KDM5C	Del_9p23	0.575	1
ALMS1	6p-Del	0.576	1
FGFR3	8p-Del	0.577	1
FGFR3	Del_13q13.2	0.577	1
KRAS	8p-Del	0.577	1
KRAS	Del_9p23	0.577	1
KRAS	Del_13q13.2	0.577	1
NOM1	Del_9p23	0.577	1
NOM1	Del_13q13.2	0.577	1
NTRK3	8p-Del	0.577	1
NTRK3	Del_9p23	0.577	1
NTRK3	Del_13q13.2	0.577	1
PODXL	8p-Del	0.577	1
PODXL	Del_13q13.2	0.577	1
SLC23A1	Del_9p23	0.577	1
SLC23A1	Del_13q13.2	0.577	1
CUL3	PTEN	0.578	1
NF2	PTEN	0.578	1
NF2	Amp_2q32.1	0.578	1
Amp_2q32.1	Del_16q23.3	0.578	1
5q-Amp	Del_11q23.1	0.579	1
ARHGAP33	12q-Amp	0.581	1
ARID1A	SETD2	0.581	1
BRAF	1p-Del	0.581	1
EDIL3	1p-Del	0.581	1
MYF6	1p-Del	0.581	1
NASP	12q-Amp	0.581	1
NUDT11	12q-Amp	0.581	1
NUDT11	1p-Del	0.581	1
RIMBP3	1p-Del	0.581	1
STXBP3	1p-Del	0.581	1
ZNF438	1p-Del	0.581	1
MTOR	NEFH	0.583	1
MTOR	NFE2L2	0.583	1
NEFH	3q-Del	0.583	1
PCF11	3q-Del	0.583	1
ZNF814	Del_10q23.31	0.583	1
5q-Amp	17p-Del	0.583	1
NIPBL	Amp_7q31.2	0.584	1
20q-Amp	18q-Del	0.584	1
ALMS1	Del_11q23.1	0.585	1
BRAF	6p-Del	0.585	1
EDIL3	6p-Del	0.585	1
NUDT11	6p-Del	0.585	1
STXBP3	6p-Del	0.585	1
ZNF438	6p-Del	0.585	1
ZNF521	6p-Del	0.585	1
20p-Amp	9q-Del	0.585	1
CUL3	Del_9p23	0.586	1
CUL3	Del_13q13.2	0.586	1
KDM5C	NIPBL	0.586	1
KDM5C	PIK3CA	0.586	1
KDM5C	STAG2	0.586	1
NF2	8p-Del	0.586	1
ARAP3	Del_1p31.1	0.587	1
CDK12	18p-Del	0.587	1
FZR1	Del_1p31.1	0.587	1
KRAS	Amp_3q26.32	0.587	1
PODXL	Amp_3q26.32	0.587	1
SYNE1	3q-Del	0.587	1
TCEB1	Del_1p31.1	0.587	1
WASL	18p-Del	0.587	1
Amp_Xq11.2	Del_1p31.1	0.587	1
FAT1	6q-Del	0.588	1
NEFH	6q-Del	0.588	1
SMARCA4	6q-Del	0.588	1
ARHGAP33	Del_8p23.2	0.589	1
BRAF	Del_10q23.31	0.589	1
EDIL3	Del_8p23.2	0.589	1
EDIL3	Del_10q23.31	0.589	1
MYF6	Del_8p23.2	0.589	1
NASP	Del_8p23.2	0.589	1
NF1	12p-Amp	0.589	1
NUDT11	Del_8p23.2	0.589	1
NUDT11	Del_10q23.31	0.589	1
STXBP3	Del_8p23.2	0.589	1
STXBP3	Del_10q23.31	0.589	1
ZNF438	Del_10q23.31	0.589	1
ZNF521	Del_10q23.31	0.589	1
5p-Amp	Del_11q23.1	0.589	1
ARAP3	14q-Del	0.59	1
CSK	14q-Del	0.59	1
ENO1	14q-Del	0.59	1
FZR1	14q-Del	0.59	1
SLC6A14	14q-Del	0.59	1
SMARCA4	Del_2q22.1	0.59	1
TCEB1	14q-Del	0.59	1
ZC3H3	14q-Del	0.59	1
ATM	FAT1	0.591	1
ARHGAP35	3q-Amp	0.592	1
CSF1R	3q-Amp	0.592	1
EGFR	3q-Amp	0.592	1
EGFR	13q-Del	0.592	1
FGFR3	3p-Del	0.592	1
KIAA0922	3q-Amp	0.592	1
KIAA0922	13q-Del	0.592	1
PRKAG2	3q-Amp	0.592	1
PTCH1	3q-Amp	0.592	1
PTCH1	13q-Del	0.592	1
RAI1	Del_4q34.3	0.592	1
DNMT3A	Del_1p31.1	0.593	1
NUDT11	20p-Amp	0.593	1
RAI1	Del_1p31.1	0.593	1
SMARCB1	VHL	0.593	1
VHL	WDR52	0.593	1
ZNF438	20p-Amp	0.593	1
CXorf23	17q-Amp	0.594	1
ECHDC2	17q-Amp	0.594	1
HSPA2	17q-Amp	0.594	1
KIF16B	17q-Amp	0.594	1
KLK10	17q-Amp	0.594	1
TP53	3p-Amp	0.594	1
TP53	7q-Amp	0.594	1
VCL	17q-Amp	0.594	1
ZNF532	17q-Amp	0.594	1
AR	Del_2q37.3	0.596	1
5q-Amp	Del_9p21.3	0.596	1
CSK	Amp_5q35.1	0.597	1
FZR1	Amp_5q35.1	0.597	1
KRAS	17p-Del	0.597	1
MET	10q-Del	0.597	1
NOM1	17p-Del	0.597	1
NTRK3	17p-Del	0.597	1
SLC23A1	17p-Del	0.597	1
TCEB1	Amp_5q35.1	0.597	1
2q-Amp	10q-Del	0.597	1
CACNA1C	PTEN	0.598	1
MET	Del_14q31.1	0.598	1
NFE2L2	Del_3p12.2	0.598	1
NIPBL	PTEN	0.598	1
NIPBL	Amp_2q32.1	0.598	1
NUDT11	20q-Amp	0.598	1
PIK3CA	PTEN	0.598	1
PIK3CA	Amp_2q32.1	0.598	1
RILPL1	20q-Amp	0.598	1
ZFYVE26	16p-Amp	0.598	1
ZNF438	20q-Amp	0.598	1
2q-Amp	Del_14q31.1	0.598	1
ADAM28	3p-Del	0.599	1
C9orf171	3p-Del	0.599	1
DNMT3A	14q-Del	0.599	1
IMPA2	3p-Del	0.599	1
OR10G3	3p-Del	0.599	1
PRODH	3p-Del	0.599	1
SCYL1	3p-Del	0.599	1
SLC1A7	3p-Del	0.599	1
SPATA13	3p-Del	0.599	1
20q-Amp	9q-Del	0.599	1
5p-Amp	17p-Del	0.599	1
SYNE1	Del_3p12.2	0.601	1
Amp_3q26.32	Del_16q23.3	0.601	1
EDIL3	Del_9p21.3	0.602	1
KRAS	5q-Amp	0.602	1
MYF6	Del_9p21.3	0.602	1
NEFH	SYNE1	0.602	1
NFE2L2	SYNE1	0.602	1
NUDT11	Del_9p21.3	0.602	1
PODXL	5q-Amp	0.602	1
STXBP3	Del_9p21.3	0.602	1
TP53	7p-Amp	0.602	1
ZNF438	Del_9p21.3	0.602	1
20p-Amp	9p-Del	0.602	1
CACNA1C	16p-Amp	0.603	1
MET	Del_16q23.3	0.603	1
NF2	2q-Amp	0.603	1
STAG2	16p-Amp	0.603	1
ZNF814	Del_9p21.3	0.603	1
2q-Amp	Del_16q23.3	0.603	1
ARHGAP35	Del_2q22.1	0.604	1
EPS15L1	Del_3p21.2	0.604	1
KIAA0922	Del_2q22.1	0.604	1
PRKAG2	Del_2q22.1	0.604	1
PTCH1	Del_2q22.1	0.604	1
Del_3p26.3	Del_10q23.31	0.604	1
EPS15L1	TP53	0.605	1
BCLAF1	Del_14q31.1	0.606	1
BRAF	10q-Del	0.606	1
EDIL3	10q-Del	0.606	1
EPS15L1	Del_14q31.1	0.606	1
NUDT11	10q-Del	0.606	1
STXBP3	10q-Del	0.606	1
TXNIP	3p-Amp	0.606	1
VHL	9q-Del	0.606	1
ZNF438	10q-Del	0.606	1
ZNF521	10q-Del	0.606	1
ADCY8	17p-Amp	0.607	1
GALNT7	17p-Amp	0.607	1
KDM6A	1p-Del	0.607	1
KRAS	5p-Amp	0.607	1
KRAS	9q-Del	0.607	1
NOM1	9q-Del	0.607	1
NTRK3	9q-Del	0.607	1
PODXL	5p-Amp	0.607	1
SLC23A1	9q-Del	0.607	1
ZFYVE26	17p-Amp	0.607	1
ZNF814	3p-Del	0.607	1
ALMS1	KDM5C	0.608	1
ARHGAP35	Del_3p21.2	0.608	1
ARHGAP35	Del_3p12.2	0.608	1
EGFR	Del_3p12.2	0.608	1
KDM5C	ZNF814	0.608	1
KDM6A	Del_11q23.1	0.608	1
PRKAG2	Del_3p12.2	0.608	1
PTCH1	Del_3p12.2	0.608	1
16q-Amp	Del_16q23.3	0.608	1
CSF1R	18q-Del	0.609	1
DNMT3A	Amp_5q35.1	0.609	1
EGFR	18q-Del	0.609	1
NIPBL	7q-Amp	0.609	1
PTCH1	18q-Del	0.609	1
RAI1	Amp_5q35.1	0.609	1
ACSF2	MTOR	0.61	1
DNMT3A	3q-Del	0.61	1
MTOR	RAI1	0.61	1
RAI1	3q-Del	0.61	1
ZNF814	10q-Del	0.61	1
AR	Del_1q44	0.611	1
ARAP3	6q-Del	0.611	1
NIPBL	Del_1q44	0.611	1
STAG2	Del_1q44	0.611	1
TCEB1	6q-Del	0.611	1
ZC3H3	6q-Del	0.611	1
6q-Del	Amp_Xq11.2	0.611	1
FGFR3	SETD2	0.612	1
KRAS	SETD2	0.612	1
KRAS	9p-Del	0.612	1
NOM1	SETD2	0.612	1
NOM1	9p-Del	0.612	1
NTRK3	9p-Del	0.612	1
PODXL	SETD2	0.612	1
SETD2	SLC23A1	0.612	1
SLC23A1	9p-Del	0.612	1
ADAM28	Amp_7q31.2	0.613	1
C9orf171	Amp_7q31.2	0.613	1
CARKD	Amp_7q31.2	0.613	1
CDKN2A	16p-Amp	0.613	1
CXorf23	16p-Amp	0.613	1
DNAJA3	16p-Amp	0.613	1
DPYSL4	Amp_7q31.2	0.613	1
ECHDC2	16p-Amp	0.613	1
HSPA2	16p-Amp	0.613	1
KIF16B	16p-Amp	0.613	1
KLK10	16p-Amp	0.613	1
OR10G3	Amp_7q31.2	0.613	1
SLC1A7	Amp_7q31.2	0.613	1
SPATA13	Amp_7q31.2	0.613	1
ZNF532	16p-Amp	0.613	1
ARID1A	14q-Del	0.614	1
FGFR3	Amp_7q31.2	0.614	1
KDM6A	6p-Del	0.614	1
NIPBL	17p-Amp	0.614	1
NIPBL	7p-Amp	0.614	1
NTRK3	Amp_7q31.2	0.614	1
PIK3CA	17p-Amp	0.614	1
CUL3	17p-Del	0.616	1
20q-Amp	9p-Del	0.616	1
FGFR3	21q-Del	0.617	1
NEFH	PBRM1	0.617	1
NFE2L2	PBRM1	0.617	1
NOM1	21q-Del	0.617	1
PBRM1	PCF11	0.617	1
PODXL	21q-Del	0.617	1
SLC23A1	21q-Del	0.617	1
AR	8p-Del	0.618	1
AR	Del_9p23	0.618	1
AR	Del_13q13.2	0.618	1
CACNA1C	8p-Del	0.618	1
PARD6B	Del_3p14.1	0.618	1
PIK3CA	Del_13q13.2	0.618	1
SMARCB1	Del_3p14.1	0.618	1
STAG2	8p-Del	0.618	1
ZFYVE26	Del_3p14.1	0.618	1
ALMS1	PTEN	0.619	1
ALMS1	Amp_2q32.1	0.619	1
BRAF	Del_2q37.3	0.619	1
CDKN2A	17p-Amp	0.619	1
CXorf23	17p-Amp	0.619	1
ECHDC2	17p-Amp	0.619	1
EDIL3	Del_2q37.3	0.619	1
GPR50	Del_2q37.3	0.619	1
HSPA2	17p-Amp	0.619	1
KIF16B	17p-Amp	0.619	1
KLK10	17p-Amp	0.619	1
NUDT11	Del_2q37.3	0.619	1
PTEN	ZNF814	0.619	1
PTEN	Amp_3q26.32	0.619	1
VCL	17p-Amp	0.619	1
ZNF438	Del_2q37.3	0.619	1
ZNF521	Del_2q37.3	0.619	1
ZNF532	17p-Amp	0.619	1
KDM6A	Del_8p23.2	0.62	1
KDM6A	Del_10q23.31	0.62	1
NF1	Del_8p23.2	0.62	1
NF1	Del_10q23.31	0.62	1
BCLAF1	Del_4q34.3	0.621	1
EPS15L1	Del_4q34.3	0.621	1
GALNT7	Del_6q26	0.621	1
PARD6B	Del_6q26	0.621	1
PCK1	Del_6q26	0.621	1
PTEN	Del_3p26.3	0.622	1
SLC6A14	Del_3p21.2	0.622	1
ADAM28	7q-Amp	0.623	1
AR	MET	0.623	1
C9orf171	7q-Amp	0.623	1
CACNA1C	MET	0.623	1
CARKD	7q-Amp	0.623	1
DPYSL4	7q-Amp	0.623	1
MET	PIK3CA	0.623	1
MET	STAG2	0.623	1
NIPBL	2q-Amp	0.623	1
OR10G3	7q-Amp	0.623	1
SCYL1	7q-Amp	0.623	1
SLC1A7	7q-Amp	0.623	1
SPATA13	7q-Amp	0.623	1
5q-Amp	Del_16q23.3	0.624	1
ADAM28	7p-Amp	0.625	1
C9orf171	7p-Amp	0.625	1
CARKD	7p-Amp	0.625	1
DPYSL4	7p-Amp	0.625	1
OR10G3	7p-Amp	0.625	1
SCYL1	7p-Amp	0.625	1
SLC1A7	7p-Amp	0.625	1
SPATA13	7p-Amp	0.625	1
BCLAF1	Amp_7q31.2	0.626	1
EPS15L1	Amp_7q31.2	0.626	1
ARHGAP33	VHL	0.627	1
ARID1A	Amp_5q35.1	0.627	1
BRAF	VHL	0.627	1
CDKN2A	Del_6q26	0.627	1
CSF1R	18p-Del	0.627	1
CXorf23	Del_6q26	0.627	1
DNAJA3	Del_6q26	0.627	1
ECHDC2	Del_6q26	0.627	1
EGFR	18p-Del	0.627	1
HSPA2	Del_6q26	0.627	1
MYF6	VHL	0.627	1
PAM	Del_6q26	0.627	1
PTCH1	18p-Del	0.627	1
RILPL1	VHL	0.627	1
VCL	Del_6q26	0.627	1
VHL	ZNF438	0.627	1
ACSF2	SYNE1	0.628	1
BRAF	Del_1q44	0.628	1
CDK12	17q-Amp	0.628	1
DNMT3A	SYNE1	0.628	1
EDIL3	Del_1q44	0.628	1
NFE2L2	12p-Amp	0.628	1
NUDT11	Del_1q44	0.628	1
STXBP3	Del_1q44	0.628	1
ZNF438	Del_1q44	0.628	1
ZNF521	Del_1q44	0.628	1
3p-Amp	Del_4q34.3	0.628	1
10q-Del	Del_3p26.3	0.628	1
FGFR3	7q-Amp	0.629	1
NOM1	7q-Amp	0.629	1
NTRK3	7q-Amp	0.629	1
5p-Amp	9q-Del	0.629	1
5q-Amp	9p-Del	0.629	1
KDM5C	KDM6A	0.63	1
SETD2	Del_9p21.3	0.63	1
STAG2	Del_6q26	0.631	1
CUL3	9q-Del	0.632	1
NEFH	Del_11q23.1	0.632	1
PCF11	Del_11q23.1	0.632	1
PIK3CA	Amp_3q26.32	0.632	1
STAG2	Amp_3q26.32	0.632	1
5p-Amp	Del_16q23.3	0.632	1
ARHGAP33	8p-Del	0.633	1
ARHGAP33	Del_13q13.2	0.633	1
BRAF	Del_9p23	0.633	1
BRAF	Del_13q13.2	0.633	1
EDIL3	8p-Del	0.633	1
EDIL3	Del_9p23	0.633	1
EDIL3	Del_13q13.2	0.633	1
FGFR3	7p-Amp	0.633	1
GPR50	Del_13q13.2	0.633	1
MYF6	8p-Del	0.633	1
MYF6	Del_9p23	0.633	1
MYF6	Del_13q13.2	0.633	1
NASP	8p-Del	0.633	1
NASP	Del_13q13.2	0.633	1
NTRK3	7p-Amp	0.633	1
NUDT11	8p-Del	0.633	1
NUDT11	Del_9p23	0.633	1
NUDT11	Del_13q13.2	0.633	1
RILPL1	Del_13q13.2	0.633	1
RIMBP3	Del_13q13.2	0.633	1
STXBP3	8p-Del	0.633	1
STXBP3	Del_9p23	0.633	1
STXBP3	Del_13q13.2	0.633	1
ZNF438	8p-Del	0.633	1
ZNF438	Del_9p23	0.633	1
ZNF438	Del_13q13.2	0.633	1
GALNT7	16q-Amp	0.634	1
TP53	Amp_2q32.1	0.634	1
ZFYVE26	16q-Amp	0.634	1
5p-Amp	18p-Del	0.634	1
KDM5C	9q-Del	0.635	1
ADCY8	TP53	0.636	1
CDKN2A	16q-Amp	0.636	1
CXorf23	16q-Amp	0.636	1
DNAJA3	16q-Amp	0.636	1
ECHDC2	16q-Amp	0.636	1
HSPA2	16q-Amp	0.636	1
KIF16B	16q-Amp	0.636	1
KLK10	16q-Amp	0.636	1
PARD6B	TP53	0.636	1
PCK1	TP53	0.636	1
PTEN	Del_3p12.2	0.636	1
SETD2	VHL	0.636	1
TP53	ZFYVE26	0.636	1
ZNF532	16q-Amp	0.636	1
2q-Amp	Del_3p14.1	0.636	1
Amp_3q26.32	Del_4q34.3	0.636	1
ARAP3	12p-Amp	0.637	1
CSK	12p-Amp	0.637	1
SLC6A14	12p-Amp	0.637	1
TCEB1	12p-Amp	0.637	1
BCLAF1	MTOR	0.638	1
EPS15L1	MTOR	0.638	1
FGFR3	13q-Del	0.638	1
KRAS	3q-Amp	0.638	1
KRAS	13q-Del	0.638	1
NOM1	3q-Amp	0.638	1
NOM1	13q-Del	0.638	1
NTRK3	13q-Del	0.638	1
PODXL	3q-Amp	0.638	1
PODXL	13q-Del	0.638	1
SLC23A1	13q-Del	0.638	1
17p-Del	Amp_2q32.1	0.638	1
ADCY8	Del_1p36.31	0.639	1
ALMS1	Amp_7q31.2	0.639	1
CDKN2A	Del_1p36.31	0.639	1
CUL3	9p-Del	0.639	1
CXorf23	Del_1p36.31	0.639	1
DNAJA3	Del_1p36.31	0.639	1
ECHDC2	Del_1p36.31	0.639	1
HSPA2	Del_1p36.31	0.639	1
KLK10	Del_1p36.31	0.639	1
MTOR	Del_6q26	0.639	1
NF1	Del_9p21.3	0.639	1
PAM	Del_1p36.31	0.639	1
SMARCB1	Del_1p36.31	0.639	1
VCL	Del_1p36.31	0.639	1
ZFYVE26	Del_1p36.31	0.639	1
ZNF532	Del_1p36.31	0.639	1
ARHGAP35	Amp_17q24.3	0.64	1
PTCH1	Amp_17q24.3	0.64	1
KDM6A	PTEN	0.641	1
KDM6A	Amp_2q32.1	0.641	1
NF1	Amp_2q32.1	0.641	1
ARHGAP33	Amp_3q26.32	0.642	1
BRAF	Amp_3q26.32	0.642	1
MYF6	Amp_3q26.32	0.642	1
NASP	Amp_3q26.32	0.642	1
NUDT11	Amp_3q26.32	0.642	1
ZNF438	Amp_3q26.32	0.642	1
ZNF521	Amp_3q26.32	0.642	1
6p-Del	Del_14q31.1	0.642	1
ALMS1	MET	0.643	1
ALMS1	2q-Amp	0.643	1
ATM	Del_3p14.1	0.643	1
MET	ZNF814	0.643	1
SMARCA4	Del_3p14.1	0.643	1
ARHGAP35	Del_3p26.3	0.644	1
KDM5C	9p-Del	0.644	1
ZNF814	Del_1q44	0.644	1
Del_3p12.2	Del_16q23.3	0.644	1
BCLAF1	14q-Del	0.645	1
20p-Amp	Del_9p23	0.645	1
ARHGAP33	Del_3p14.1	0.646	1
ARHGAP35	3p-Amp	0.646	1
BCLAF1	7q-Amp	0.646	1
CSF1R	3p-Amp	0.646	1
EGFR	3p-Amp	0.646	1
EPS15L1	7q-Amp	0.646	1
EPS15L1	Del_3p26.3	0.646	1
KDM6A	10q-Del	0.646	1
KIAA0922	3p-Amp	0.646	1
MYF6	Del_3p14.1	0.646	1
NASP	Del_3p14.1	0.646	1
NEFH	1p-Del	0.646	1
NF1	10q-Del	0.646	1
NFE2L2	12q-Amp	0.646	1
PRKAG2	3p-Amp	0.646	1
PTCH1	3p-Amp	0.646	1
RILPL1	Del_3p14.1	0.646	1
RIMBP3	Del_3p14.1	0.646	1
CUL3	21q-Del	0.647	1
NF2	21q-Del	0.647	1
NIPBL	17p-Del	0.647	1
PIK3CA	17p-Del	0.647	1
ARAP3	12q-Amp	0.648	1
ARAP3	1p-Del	0.648	1
CACNA1C	16q-Amp	0.648	1
CSK	12q-Amp	0.648	1
FZR1	1p-Del	0.648	1
PTEN	5q-Amp	0.648	1
SLC6A14	12q-Amp	0.648	1
STAG2	16q-Amp	0.648	1
TCEB1	12q-Amp	0.648	1
TCEB1	1p-Del	0.648	1
1p-Del	Amp_Xq11.2	0.648	1
FGFR3	Del_2q22.1	0.649	1
KRAS	Del_2q22.1	0.649	1
NOM1	Del_2q22.1	0.649	1
SLC23A1	Del_2q22.1	0.649	1
SLC6A14	Del_3p26.3	0.649	1
BCLAF1	7p-Amp	0.65	1
CDKN2A	Del_14q31.1	0.65	1
CXorf23	Del_14q31.1	0.65	1
DNAJA3	Del_14q31.1	0.65	1
ECHDC2	Del_14q31.1	0.65	1
EPS15L1	7p-Amp	0.65	1
HSPA2	Del_14q31.1	0.65	1
KLK10	Del_14q31.1	0.65	1
PTEN	16p-Amp	0.65	1
TP53	12q-Amp	0.65	1
ZNF532	Del_14q31.1	0.65	1
ALMS1	Del_9p23	0.651	1
ARAP3	6p-Del	0.651	1
BRAF	17p-Del	0.651	1
EDIL3	17p-Del	0.651	1
FZR1	6p-Del	0.651	1
NUDT11	17p-Del	0.651	1
STXBP3	17p-Del	0.651	1
TCEB1	6p-Del	0.651	1
ZC3H3	6p-Del	0.651	1
ZNF438	17p-Del	0.651	1
ZNF521	17p-Del	0.651	1
ZNF814	Del_9p23	0.651	1
6p-Del	Amp_Xq11.2	0.651	1
ADCY8	Del_4q34.3	0.652	1
ARID1A	Amp_7q31.2	0.652	1
NEFH	6p-Del	0.652	1
PARD6B	Del_4q34.3	0.652	1
PCK1	Del_4q34.3	0.652	1
WDR52	Del_4q34.3	0.652	1
ZFYVE26	Del_4q34.3	0.652	1
KDM5C	NEFH	0.653	1
KDM5C	PCF11	0.653	1
NF2	Del_3p14.1	0.653	1
3q-Amp	Del_11q23.1	0.653	1
Del_3p14.1	Del_16q23.3	0.653	1
AR	5q-Amp	0.654	1
AR	Del_1p36.31	0.654	1
CACNA1C	5q-Amp	0.654	1
FGFR3	18q-Del	0.654	1
KRAS	18q-Del	0.654	1
NIPBL	Del_1p36.31	0.654	1
PIK3CA	Del_1p36.31	0.654	1
SLC23A1	18q-Del	0.654	1
STAG2	Del_1p36.31	0.654	1
ACSF2	Del_3p12.2	0.655	1
ARAP3	Del_10q23.31	0.655	1
BRAF	5q-Amp	0.655	1
CSK	Del_8p23.2	0.655	1
DNMT3A	Del_3p12.2	0.655	1
EPS15L1	Amp_5q35.1	0.655	1
FZR1	Del_8p23.2	0.655	1
FZR1	Del_10q23.31	0.655	1
RAI1	Del_3p12.2	0.655	1
RILPL1	5q-Amp	0.655	1
RIMBP3	5q-Amp	0.655	1
STXBP3	5q-Amp	0.655	1
TCEB1	Del_10q23.31	0.655	1
ZNF521	5q-Amp	0.655	1
CDK12	16p-Amp	0.656	1
MTOR	8p-Del	0.656	1
ACSF2	Del_11q23.1	0.657	1
ATM	CUL3	0.657	1
ATM	NF2	0.657	1
ATM	3p-Amp	0.657	1
DNMT3A	Del_11q23.1	0.657	1
FAT1	Del_16q23.3	0.657	1
PARD6B	Del_14q31.1	0.657	1
PTEN	5p-Amp	0.657	1
PTEN	9q-Del	0.657	1
SMARCA4	Del_16q23.3	0.657	1
ADAM28	Del_3p12.2	0.658	1
C9orf171	Del_3p12.2	0.658	1
IMPA2	Del_3p12.2	0.658	1
MET	14q-Del	0.658	1
NFE2L2	Del_10q23.31	0.658	1
OR10G3	Del_3p12.2	0.658	1
PCF11	Del_10q23.31	0.658	1
PRODH	Del_3p12.2	0.658	1
SCYL1	Del_3p12.2	0.658	1
SLC1A7	Del_3p12.2	0.658	1
SPATA13	Del_3p12.2	0.658	1
ARAP3	20p-Amp	0.659	1
CSK	20p-Amp	0.659	1
FZR1	20p-Amp	0.659	1
SLC6A14	20p-Amp	0.659	1
SYNE1	Amp_5q35.1	0.659	1
TCEB1	20p-Amp	0.659	1
TP53	16p-Amp	0.659	1
20p-Amp	Amp_Xq11.2	0.659	1
20q-Amp	Del_9p23	0.659	1
Amp_2q32.1	Del_4q34.3	0.659	1
BRAF	5p-Amp	0.66	1
BRAF	9q-Del	0.66	1
EDIL3	9q-Del	0.66	1
MYF6	9q-Del	0.66	1
NUDT11	9q-Del	0.66	1
RILPL1	5p-Amp	0.66	1
RIMBP3	5p-Amp	0.66	1
STXBP3	5p-Amp	0.66	1
STXBP3	9q-Del	0.66	1
ZNF438	9q-Del	0.66	1
ZNF521	5p-Amp	0.66	1
ATM	12q-Amp	0.662	1
ATM	1p-Del	0.662	1
CACNA1C	5p-Amp	0.662	1
ARAP3	20q-Amp	0.663	1
CSK	20q-Amp	0.663	1
FZR1	20q-Amp	0.663	1
NEFH	PTEN	0.663	1
NFE2L2	Amp_2q32.1	0.663	1
PCF11	PTEN	0.663	1
PCF11	Amp_2q32.1	0.663	1
SLC6A14	20q-Amp	0.663	1
SYNE1	Del_11q23.1	0.663	1
TCEB1	20q-Amp	0.663	1
20q-Amp	Amp_Xq11.2	0.663	1
ARHGAP33	SETD2	0.664	1
BRAF	SETD2	0.664	1
BRAF	9p-Del	0.664	1
EDIL3	9p-Del	0.664	1
GPR50	SETD2	0.664	1
KDM6A	MET	0.664	1
KDM6A	2q-Amp	0.664	1
MYF6	9p-Del	0.664	1
NASP	SETD2	0.664	1
NF1	2q-Amp	0.664	1
NUDT11	SETD2	0.664	1
NUDT11	9p-Del	0.664	1
PCF11	20p-Amp	0.664	1
RIMBP3	SETD2	0.664	1
SETD2	STXBP3	0.664	1
SETD2	ZNF438	0.664	1
SETD2	ZNF521	0.664	1
STXBP3	9p-Del	0.664	1
ZNF438	9p-Del	0.664	1
CDK12	17p-Amp	0.665	1
KDM6A	Del_2q37.3	0.665	1
ADAM28	PBRM1	0.666	1
C9orf171	PBRM1	0.666	1
CARKD	PBRM1	0.666	1
CDCA8	PBRM1	0.666	1
CSK	Del_9p21.3	0.666	1
DPYSL4	PBRM1	0.666	1
IMPA2	PBRM1	0.666	1
INPP5E	PBRM1	0.666	1
PBRM1	PRDX5	0.666	1
PBRM1	SCYL1	0.666	1
PBRM1	SLC1A7	0.666	1
PBRM1	SPATA13	0.666	1
SLC6A14	Del_9p21.3	0.666	1
TCEB1	Del_9p21.3	0.666	1
ZC3H3	Del_9p21.3	0.666	1
ADCY8	MTOR	0.668	1
ADCY8	3p-Del	0.668	1
GALNT7	MTOR	0.668	1
KDM5C	3q-Del	0.668	1
MTOR	PARD6B	0.668	1
MTOR	WDR52	0.668	1
MTOR	ZFYVE26	0.668	1
PARD6B	3p-Del	0.668	1
PCK1	3q-Del	0.668	1
SMARCB1	3p-Del	0.668	1
SMARCB1	3q-Del	0.668	1
ZFYVE26	3p-Del	0.668	1
ZFYVE26	3q-Del	0.668	1
AR	SETD2	0.669	1
AR	9p-Del	0.669	1
BRAF	21q-Del	0.669	1
NUDT11	21q-Del	0.669	1
PIK3CA	SETD2	0.669	1
TP53	TXNIP	0.669	1
ZNF438	21q-Del	0.669	1
ZNF521	21q-Del	0.669	1
ARAP3	10q-Del	0.67	1
FZR1	10q-Del	0.67	1
PCF11	20q-Amp	0.67	1
TCEB1	10q-Del	0.67	1
16p-Amp	18p-Del	0.67	1
CDKN2A	Del_1p31.1	0.671	1
CXorf23	Del_1p31.1	0.671	1
DNAJA3	Del_1p31.1	0.671	1
ECHDC2	Del_1p31.1	0.671	1
FGFR3	18p-Del	0.671	1
HSPA2	Del_1p31.1	0.671	1
KLK10	Del_1p31.1	0.671	1
KRAS	18p-Del	0.671	1
MET	TP53	0.671	1
PAM	Del_1p31.1	0.671	1
PIK3CA	Del_3p21.2	0.671	1
PODXL	18p-Del	0.671	1
SLC23A1	18p-Del	0.671	1
TP53	2q-Amp	0.671	1
VCL	Del_1p31.1	0.671	1
ZNF532	Del_1p31.1	0.671	1
1p-Del	Del_3p12.2	0.671	1
ACSF2	PBRM1	0.672	1
GLS	VHL	0.672	1
TXNIP	VHL	0.672	1
CDKN2A	14q-Del	0.674	1
CXorf23	14q-Del	0.674	1
DNAJA3	14q-Del	0.674	1
ECHDC2	14q-Del	0.674	1
HSPA2	14q-Del	0.674	1
KLK10	14q-Del	0.674	1
ZNF532	14q-Del	0.674	1
AR	ATM	0.675	1
AR	FAT1	0.675	1
AR	SMARCA4	0.675	1
ATM	PIK3CA	0.675	1
ATM	STAG2	0.675	1
CACNA1C	SMARCA4	0.675	1
NIPBL	SMARCA4	0.675	1
PIK3CA	SMARCA4	0.675	1
SMARCA4	STAG2	0.675	1
PCF11	Del_9p21.3	0.676	1
STAG2	21q-Del	0.676	1
ADAM28	Amp_17q24.3	0.677	1
ARID1A	7q-Amp	0.677	1
ARID1A	18p-Del	0.677	1
ATM	Del_8p23.2	0.677	1
C16orf78	Amp_17q24.3	0.677	1
CACNA1C	Del_14q31.1	0.677	1
CARKD	Amp_17q24.3	0.677	1
CDCA8	Amp_17q24.3	0.677	1
CDK12	Del_6q26	0.677	1
DNMT3A	KDM5C	0.677	1
DPYSL4	Amp_17q24.3	0.677	1
FAM178A	Del_6q26	0.677	1
FAT1	Del_8p23.2	0.677	1
GLS	Del_6q26	0.677	1
IMPA2	Amp_17q24.3	0.677	1
NIPBL	Del_14q31.1	0.677	1
OR10G3	Amp_17q24.3	0.677	1
PRDX5	Amp_17q24.3	0.677	1
PRODH	Amp_17q24.3	0.677	1
SCYL1	Amp_17q24.3	0.677	1
SLC1A7	Amp_17q24.3	0.677	1
STAG2	Del_14q31.1	0.677	1
WASL	Del_6q26	0.677	1
3p-Del	Del_11q23.1	0.677	1
ALMS1	17p-Del	0.678	1
CACNA1C	VHL	0.678	1
CUL3	3q-Amp	0.678	1
PIK3CA	VHL	0.678	1
ATM	Del_6q26	0.679	1
ATM	Del_3p12.2	0.68	1
CXorf23	Amp_5q35.1	0.68	1
DNAJA3	Amp_5q35.1	0.68	1
FAT1	Del_3p12.2	0.68	1
HSPA2	Amp_5q35.1	0.68	1
KLK10	Amp_5q35.1	0.68	1
PAM	Amp_5q35.1	0.68	1
ZNF532	Amp_5q35.1	0.68	1
ARID1A	17q-Amp	0.682	1
ENO1	Del_2q37.3	0.682	1
FZR1	Del_2q37.3	0.682	1
NFE2L2	10q-Del	0.682	1
PCF11	10q-Del	0.682	1
TCEB1	Del_2q37.3	0.682	1
Amp_Xq11.2	Del_2q37.3	0.682	1
CYP2C18	Del_3p21.2	0.683	1
F2RL1	Del_3p21.2	0.683	1
NKX2-1	Del_3p21.2	0.683	1
RCN1	Del_3p21.2	0.683	1
RNF113B	Del_3p21.2	0.683	1
SLC14A1	Del_3p21.2	0.683	1
ZNHIT1	Del_3p21.2	0.683	1
20p-Amp	Del_9p21.3	0.683	1
ADCY8	SYNE1	0.684	1
ARHGAP33	3p-Del	0.684	1
GALNT7	SYNE1	0.684	1
GPR50	3p-Del	0.684	1
KDM6A	8p-Del	0.684	1
KDM6A	Del_9p23	0.684	1
MYF6	3p-Del	0.684	1
NASP	3p-Del	0.684	1
NF1	8p-Del	0.684	1
NF1	Del_9p23	0.684	1
NUDT11	3p-Del	0.684	1
PCK1	SYNE1	0.684	1
RILPL1	3p-Del	0.684	1
SYNE1	WDR52	0.684	1
SYNE1	ZFYVE26	0.684	1
TXNIP	Del_4q34.3	0.684	1
ARID1A	CUL3	0.685	1
ARID1A	NF2	0.685	1
ARID1A	Del_16q23.3	0.685	1
MET	NEFH	0.685	1
MET	NFE2L2	0.685	1
MET	PCF11	0.685	1
MTOR	PTEN	0.685	1
NFE2L2	2q-Amp	0.685	1
PCF11	2q-Amp	0.685	1
2q-Amp	17p-Del	0.685	1
3q-Del	Amp_2q32.1	0.685	1
DNMT3A	1p-Del	0.686	1
NF2	14q-Del	0.686	1
RAI1	1p-Del	0.686	1
ACSF2	PTEN	0.687	1
ACSF2	Amp_2q32.1	0.687	1
DNMT3A	PTEN	0.687	1
DNMT3A	Amp_2q32.1	0.687	1
RAI1	Amp_2q32.1	0.687	1
ARHGAP33	13q-Del	0.688	1
BRAF	3q-Amp	0.688	1
BRAF	13q-Del	0.688	1
EDIL3	13q-Del	0.688	1
GPR50	13q-Del	0.688	1
KRAS	3p-Amp	0.688	1
MYF6	3q-Amp	0.688	1
NASP	3q-Amp	0.688	1
NASP	13q-Del	0.688	1
NOM1	3p-Amp	0.688	1
NUDT11	3q-Amp	0.688	1
NUDT11	13q-Del	0.688	1
PODXL	3p-Amp	0.688	1
RILPL1	13q-Del	0.688	1
RIMBP3	3q-Amp	0.688	1
STXBP3	13q-Del	0.688	1
ZNF438	3q-Amp	0.688	1
ZNF438	13q-Del	0.688	1
ZNF521	3q-Amp	0.688	1
ADCY8	Del_1p31.1	0.689	1
ALMS1	16q-Amp	0.69	1
ARAP3	Del_1q44	0.69	1
CUL3	Amp_17q24.3	0.69	1
TCEB1	Del_1q44	0.69	1
Amp_17q24.3	Del_16q23.3	0.69	1
Amp_Xq11.2	Del_1q44	0.69	1
ARHGAP35	17q-Amp	0.691	1
NIPBL	Del_3p12.2	0.691	1
PRKAG2	17q-Amp	0.691	1
PTCH1	17q-Amp	0.691	1
CDKN2A	6q-Del	0.692	1
CXorf23	6q-Del	0.692	1
DNAJA3	6q-Del	0.692	1
ECHDC2	6q-Del	0.692	1
HSPA2	6q-Del	0.692	1
KIF16B	6q-Del	0.692	1
NF1	16p-Amp	0.692	1
PAM	6q-Del	0.692	1
VCL	6q-Del	0.692	1
ALMS1	ATM	0.693	1
ALMS1	FAT1	0.693	1
ALMS1	SMARCA4	0.693	1
ARAP3	Del_13q13.2	0.693	1
ATM	ZNF814	0.693	1
CSK	8p-Del	0.693	1
CSK	Del_9p23	0.693	1
ENO1	Del_13q13.2	0.693	1
FAT1	ZNF814	0.693	1
FZR1	8p-Del	0.693	1
FZR1	Del_13q13.2	0.693	1
GALNT7	Amp_7q31.2	0.693	1
GLS	Del_1p36.31	0.693	1
PARD6B	14q-Del	0.693	1
PARD6B	Amp_7q31.2	0.693	1
RAI1	Amp_17q24.3	0.693	1
TCEB1	Del_9p23	0.693	1
TCEB1	Del_13q13.2	0.693	1
TXNIP	Del_1p36.31	0.693	1
ZC3H3	Del_9p23	0.693	1
ZC3H3	Del_13q13.2	0.693	1
ZFYVE26	Amp_7q31.2	0.693	1
Amp_Xq11.2	Del_13q13.2	0.693	1
CDK12	Del_3p14.1	0.694	1
KDM5C	SYNE1	0.694	1
NF2	Del_2q22.1	0.694	1
TXNIP	Del_3p14.1	0.694	1
2q-Amp	Del_4q34.3	0.694	1
Del_1p36.31	Del_3p21.2	0.695	1
FGFR3	PBRM1	0.696	1
PBRM1	PODXL	0.696	1
TP53	Amp_5q35.1	0.696	1
6q-Del	Del_14q31.1	0.696	1
ACSF2	Del_8p23.2	0.697	1
RAI1	Del_8p23.2	0.697	1
RAI1	Del_10q23.31	0.697	1
SYNE1	8p-Del	0.697	1
17p-Del	3q-Del	0.697	1
BRAF	Del_2q22.1	0.698	1
CYP2C18	Del_3p26.3	0.698	1
EDIL3	Del_2q22.1	0.698	1
F2RL1	Del_3p26.3	0.698	1
MYF6	Del_2q22.1	0.698	1
NKX2-1	Del_3p26.3	0.698	1
NUDT11	Del_2q22.1	0.698	1
RCN1	Del_3p26.3	0.698	1
RIMBP3	Del_2q22.1	0.698	1
RNF113B	Del_3p26.3	0.698	1
SLC14A1	Del_3p26.3	0.698	1
STXBP3	Del_2q22.1	0.698	1
ZNF438	Del_2q22.1	0.698	1
ZNF521	Del_2q22.1	0.698	1
ZNHIT1	Del_3p26.3	0.698	1
20q-Amp	Del_9p21.3	0.698	1
ALMS1	SETD2	0.699	1
ALMS1	9p-Del	0.699	1
FAM178A	3q-Del	0.699	1
GLS	MTOR	0.699	1
GLS	3q-Del	0.699	1
SMARCA4	Del_9p21.3	0.699	1
TXNIP	3q-Del	0.699	1
WASL	3q-Del	0.699	1
ZNF814	9p-Del	0.699	1
NFE2L2	Del_2q37.3	0.7	1
ARAP3	Amp_3q26.32	0.701	1
BCLAF1	KDM5C	0.701	1
CSK	Amp_3q26.32	0.701	1
ENO1	Amp_3q26.32	0.701	1
EPS15L1	KDM5C	0.701	1
SLC6A14	Amp_3q26.32	0.701	1
TCEB1	Amp_3q26.32	0.701	1
ZC3H3	Amp_3q26.32	0.701	1
Amp_3q26.32	Amp_Xq11.2	0.701	1
AR	ARID1A	0.702	1
ARHGAP33	18q-Del	0.702	1
ARID1A	CACNA1C	0.702	1
ARID1A	STAG2	0.702	1
BRAF	18q-Del	0.702	1
BRAF	Amp_7q31.2	0.702	1
CUL3	18q-Del	0.702	1
EDIL3	18q-Del	0.702	1
GPR50	18q-Del	0.702	1
MYF6	18q-Del	0.702	1
MYF6	Amp_7q31.2	0.702	1
NASP	18q-Del	0.702	1
NF2	18q-Del	0.702	1
NUDT11	18q-Del	0.702	1
RAI1	20p-Amp	0.702	1
RIMBP3	Amp_7q31.2	0.702	1
STXBP3	18q-Del	0.702	1
ZNF521	18q-Del	0.702	1
ZNF521	Amp_7q31.2	0.702	1
PCK1	Amp_5q35.1	0.703	1
Amp_5q35.1	Del_9p23	0.703	1
ARHGAP35	TP53	0.704	1
CSF1R	TP53	0.704	1
EGFR	TP53	0.704	1
KIAA0922	TP53	0.704	1
NEFH	17q-Amp	0.704	1
NFE2L2	17q-Amp	0.704	1
PRKAG2	TP53	0.704	1
PTCH1	TP53	0.704	1
12q-Amp	18q-Del	0.704	1
AR	13q-Del	0.706	1
DNMT3A	VHL	0.706	1
NIPBL	3q-Amp	0.706	1
NIPBL	13q-Del	0.706	1
PIK3CA	3q-Amp	0.706	1
PIK3CA	13q-Del	0.706	1
ACSF2	2q-Amp	0.707	1
ADAM28	17q-Amp	0.707	1
C16orf78	17q-Amp	0.707	1
CARKD	17q-Amp	0.707	1
CDCA8	17q-Amp	0.707	1
DNMT3A	2q-Amp	0.707	1
DPYSL4	17q-Amp	0.707	1
IMPA2	17q-Amp	0.707	1
MET	RAI1	0.707	1
OR10G3	17q-Amp	0.707	1
PRDX5	17q-Amp	0.707	1
PRODH	17q-Amp	0.707	1
PTEN	16q-Amp	0.707	1
RAI1	2q-Amp	0.707	1
SCYL1	17q-Amp	0.707	1
SLC1A7	17q-Amp	0.707	1
10q-Del	Del_3p21.2	0.707	1
NIPBL	Del_3p14.1	0.708	1
PIK3CA	Del_3p14.1	0.708	1
RAI1	20q-Amp	0.708	1
Del_3p21.2	Del_11q23.1	0.708	1
ADCY8	Del_11q23.1	0.709	1
FZR1	17p-Del	0.709	1
PCK1	Del_11q23.1	0.709	1
SMARCB1	Del_11q23.1	0.709	1
TCEB1	17p-Del	0.709	1
WDR52	Del_11q23.1	0.709	1
ZFYVE26	Del_11q23.1	0.709	1
CDK12	Del_14q31.1	0.71	1
FAM178A	Del_14q31.1	0.71	1
PTEN	SYNE1	0.71	1
SYNE1	Amp_2q32.1	0.71	1
WASL	Del_14q31.1	0.71	1
ATM	KDM6A	0.711	1
BCLAF1	PTEN	0.711	1
BCLAF1	12p-Amp	0.711	1
EPS15L1	PTEN	0.711	1
EPS15L1	Amp_2q32.1	0.711	1
FAT1	KDM6A	0.711	1
GALNT7	7q-Amp	0.711	1
KDM6A	SMARCA4	0.711	1
PARD6B	7q-Amp	0.711	1
ZFYVE26	7q-Amp	0.711	1
KRAS	Amp_17q24.3	0.712	1
NEFH	Del_1q44	0.712	1
NTRK3	Amp_17q24.3	0.712	1
2q-Amp	9p-Del	0.712	1
CDKN2A	12p-Amp	0.713	1
CSK	5q-Amp	0.713	1
CXorf23	12p-Amp	0.713	1
DNAJA3	12p-Amp	0.713	1
DNMT3A	Del_9p21.3	0.713	1
ECHDC2	12p-Amp	0.713	1
FZR1	5q-Amp	0.713	1
HSPA2	12p-Amp	0.713	1
KLK10	12p-Amp	0.713	1
RAI1	Del_9p21.3	0.713	1
SLC23A1	Del_3p21.2	0.713	1
SLC6A14	5q-Amp	0.713	1
TCEB1	5q-Amp	0.713	1
VCL	12p-Amp	0.713	1
ZC3H3	5q-Amp	0.713	1
ZNF532	12p-Amp	0.713	1
FAT1	3p-Del	0.714	1
GALNT7	7p-Amp	0.714	1
GLS	SYNE1	0.714	1
KDM5C	Del_2q22.1	0.714	1
PARD6B	7p-Amp	0.714	1
SMARCA4	3p-Del	0.714	1
SYNE1	WASL	0.714	1
ZFYVE26	7p-Amp	0.714	1
CUL3	NF2	0.715	1
NF2	Del_16q23.3	0.715	1
PTEN	3q-Amp	0.715	1
5p-Amp	6p-Del	0.715	1
ARHGAP35	16p-Amp	0.716	1
CSF1R	16p-Amp	0.716	1
CUL3	3p-Del	0.716	1
KDM6A	5q-Amp	0.716	1
KIAA0922	16p-Amp	0.716	1
MYF6	7q-Amp	0.716	1
NF1	Del_6q26	0.716	1
PRKAG2	16p-Amp	0.716	1
RIMBP3	7q-Amp	0.716	1
ZNF521	7q-Amp	0.716	1
ARAP3	9q-Del	0.717	1
ARHGAP33	18p-Del	0.717	1
ARHGAP35	Del_4q34.3	0.717	1
BRAF	18p-Del	0.717	1
CSF1R	Del_4q34.3	0.717	1
CSK	5p-Amp	0.717	1
CSK	9q-Del	0.717	1
EDIL3	18p-Del	0.717	1
EGFR	Del_4q34.3	0.717	1
GPR50	18p-Del	0.717	1
KIAA0922	Del_4q34.3	0.717	1
MYF6	18p-Del	0.717	1
NASP	18p-Del	0.717	1
NUDT11	18p-Del	0.717	1
PRKAG2	Del_4q34.3	0.717	1
PTCH1	Del_4q34.3	0.717	1
RIMBP3	18p-Del	0.717	1
SLC6A14	5p-Amp	0.717	1
SLC6A14	9q-Del	0.717	1
STXBP3	18p-Del	0.717	1
SYNE1	16q-Amp	0.717	1
TCEB1	5p-Amp	0.717	1
TCEB1	9q-Del	0.717	1
ZC3H3	5p-Amp	0.717	1
ZC3H3	9q-Del	0.717	1
ZNF521	18p-Del	0.717	1
MET	MTOR	0.718	1
MYF6	7p-Amp	0.718	1
NEFH	Del_9p23	0.718	1
PCF11	Del_9p23	0.718	1
RIMBP3	7p-Amp	0.718	1
ZNF521	7p-Amp	0.718	1
2q-Amp	3q-Del	0.718	1
ARID1A	ZNF814	0.719	1
RAI1	10q-Del	0.719	1
Del_3p14.1	Del_13q13.2	0.719	1
ARAP3	SETD2	0.721	1
CSK	SETD2	0.721	1
CSK	9p-Del	0.721	1
CUL3	6q-Del	0.721	1
ENO1	SETD2	0.721	1
GALNT7	6q-Del	0.721	1
PARD6B	6q-Del	0.721	1
PCK1	6q-Del	0.721	1
PIK3CA	Del_2q22.1	0.721	1
SETD2	SLC6A14	0.721	1
SETD2	TCEB1	0.721	1
SLC6A14	9p-Del	0.721	1
STAG2	Del_2q22.1	0.721	1
TCEB1	9p-Del	0.721	1
ZC3H3	9p-Del	0.721	1
5p-Amp	6q-Del	0.721	1
ADAM28	16p-Amp	0.722	1
AR	14q-Del	0.722	1
C16orf78	16p-Amp	0.722	1
CACNA1C	14q-Del	0.722	1
CDCA8	16p-Amp	0.722	1
CDKN2A	12q-Amp	0.722	1
CDKN2A	1p-Del	0.722	1
CXorf23	12q-Amp	0.722	1
CXorf23	1p-Del	0.722	1
DNAJA3	12q-Amp	0.722	1
DNAJA3	1p-Del	0.722	1
DPYSL4	16p-Amp	0.722	1
ECHDC2	12q-Amp	0.722	1
ECHDC2	1p-Del	0.722	1
HSPA2	12q-Amp	0.722	1
HSPA2	1p-Del	0.722	1
IMPA2	16p-Amp	0.722	1
KLK10	12q-Amp	0.722	1
KLK10	1p-Del	0.722	1
NIPBL	14q-Del	0.722	1
OR10G3	16p-Amp	0.722	1
PAM	1p-Del	0.722	1
PIK3CA	14q-Del	0.722	1
PRDX5	16p-Amp	0.722	1
PRODH	16p-Amp	0.722	1
SCYL1	16p-Amp	0.722	1
SLC1A7	16p-Amp	0.722	1
SPATA13	16p-Amp	0.722	1
STAG2	14q-Del	0.722	1
VCL	12q-Amp	0.722	1
VCL	1p-Del	0.722	1
ZNF532	12q-Amp	0.722	1
ZNF532	1p-Del	0.722	1
ARHGAP35	17p-Amp	0.723	1
KDM6A	5p-Amp	0.723	1
NF1	9q-Del	0.723	1
PRKAG2	17p-Amp	0.723	1
PTCH1	17p-Amp	0.723	1
SETD2	Del_9p23	0.723	1
CDKN2A	6p-Del	0.725	1
CSK	21q-Del	0.725	1
CXorf23	6p-Del	0.725	1
DNAJA3	6p-Del	0.725	1
ECHDC2	6p-Del	0.725	1
ENO1	21q-Del	0.725	1
FZR1	21q-Del	0.725	1
HSPA2	6p-Del	0.725	1
KIF16B	6p-Del	0.725	1
PAM	6p-Del	0.725	1
TCEB1	21q-Del	0.725	1
VCL	6p-Del	0.725	1
ZNF532	6p-Del	0.725	1
21q-Del	Amp_Xq11.2	0.725	1
ADAM28	17p-Amp	0.726	1
BCLAF1	12q-Amp	0.726	1
C16orf78	17p-Amp	0.726	1
CARKD	17p-Amp	0.726	1
CDCA8	17p-Amp	0.726	1
CUL3	18p-Del	0.726	1
DPYSL4	17p-Amp	0.726	1
IMPA2	17p-Amp	0.726	1
NF2	18p-Del	0.726	1
OR10G3	17p-Amp	0.726	1
PRDX5	17p-Amp	0.726	1
PRODH	17p-Amp	0.726	1
SCYL1	17p-Amp	0.726	1
SLC1A7	17p-Amp	0.726	1
TP53	16q-Amp	0.726	1
ADCY8	KDM5C	0.727	1
EPS15L1	PBRM1	0.727	1
KDM5C	PARD6B	0.727	1
KDM5C	PCK1	0.727	1
KDM5C	SMARCB1	0.727	1
KDM5C	WDR52	0.727	1
18p-Del	Amp_7q31.2	0.727	1
ATM	Del_2q37.3	0.728	1
CDKN2A	Del_10q23.31	0.728	1
CXorf23	Del_8p23.2	0.728	1
CXorf23	Del_10q23.31	0.728	1
DNAJA3	Del_8p23.2	0.728	1
DNAJA3	Del_10q23.31	0.728	1
FAT1	Del_2q37.3	0.728	1
HSPA2	Del_8p23.2	0.728	1
HSPA2	Del_10q23.31	0.728	1
KIF16B	Del_10q23.31	0.728	1
KLK10	Del_10q23.31	0.728	1
PAM	Del_8p23.2	0.728	1
PAM	Del_10q23.31	0.728	1
STAG2	18q-Del	0.728	1
VCL	Del_8p23.2	0.728	1
ZNF532	Del_8p23.2	0.728	1
ZNF532	Del_10q23.31	0.728	1
FAT1	Amp_17q24.3	0.729	1
KDM6A	9p-Del	0.729	1
NF1	9p-Del	0.729	1
AR	NF2	0.73	1
ATM	PCF11	0.73	1
BCLAF1	MET	0.73	1
BCLAF1	2q-Amp	0.73	1
CUL3	STAG2	0.73	1
EPS15L1	MET	0.73	1
EPS15L1	2q-Amp	0.73	1
FAT1	NEFH	0.73	1
FAT1	PCF11	0.73	1
NF2	NIPBL	0.73	1
NF2	PIK3CA	0.73	1
NFE2L2	SMARCA4	0.73	1
NFE2L2	Amp_3q26.32	0.73	1
PCF11	SMARCA4	0.73	1
PCF11	Amp_3q26.32	0.73	1
ARHGAP35	3q-Del	0.731	1
CSF1R	MTOR	0.731	1
CSF1R	3q-Del	0.731	1
EGFR	MTOR	0.731	1
EGFR	3q-Del	0.731	1
KIAA0922	MTOR	0.731	1
KIAA0922	3q-Del	0.731	1
MTOR	PRKAG2	0.731	1
MTOR	PTCH1	0.731	1
NF1	16q-Amp	0.731	1
PRKAG2	3q-Del	0.731	1
ARID1A	17p-Amp	0.732	1
BRAF	3p-Amp	0.732	1
CDKN2A	20p-Amp	0.732	1
CXorf23	20p-Amp	0.732	1
DNAJA3	20p-Amp	0.732	1
ECHDC2	20p-Amp	0.732	1
HSPA2	20p-Amp	0.732	1
KIF16B	20p-Amp	0.732	1
KLK10	20p-Amp	0.732	1
MYF6	3p-Amp	0.732	1
NASP	3p-Amp	0.732	1
NUDT11	3p-Amp	0.732	1
RIMBP3	3p-Amp	0.732	1
VCL	20p-Amp	0.732	1
ZNF438	3p-Amp	0.732	1
ZNF521	3p-Amp	0.732	1
ZNF532	20p-Amp	0.732	1
ADAM28	Del_6q26	0.733	1
C9orf171	Del_6q26	0.733	1
CACNA1C	Amp_5q35.1	0.733	1
CARKD	Del_6q26	0.733	1
CDCA8	Del_6q26	0.733	1
IMPA2	Del_6q26	0.733	1
INPP5E	Del_6q26	0.733	1
NEK8	Del_6q26	0.733	1
OR10G3	Del_6q26	0.733	1
PDLIM4	Del_6q26	0.733	1
PRDX5	Del_6q26	0.733	1
SCYL1	Del_6q26	0.733	1
SPATA13	Del_6q26	0.733	1
STAG2	Amp_17q24.3	0.733	1
Amp_2q32.1	Del_2q22.1	0.733	1
ALMS1	VHL	0.734	1
ARAP3	VHL	0.734	1
ARHGAP35	Del_6q26	0.734	1
EGFR	Del_6q26	0.734	1
FZR1	VHL	0.734	1
KDM5C	Del_11q23.1	0.734	1
KIAA0922	Del_6q26	0.734	1
PRKAG2	Del_6q26	0.734	1
VHL	Amp_Xq11.2	0.734	1
ZNF814	13q-Del	0.734	1
CDKN2A	20q-Amp	0.735	1
CXorf23	20q-Amp	0.735	1
DNAJA3	20q-Amp	0.735	1
ECHDC2	20q-Amp	0.735	1
HSPA2	20q-Amp	0.735	1
KIF16B	20q-Amp	0.735	1
KLK10	20q-Amp	0.735	1
VCL	20q-Amp	0.735	1
ZNF532	20q-Amp	0.735	1
ADCY8	PTEN	0.736	1
ADCY8	Amp_2q32.1	0.736	1
ARID1A	KDM6A	0.736	1
ARID1A	NF1	0.736	1
BCLAF1	Del_8p23.2	0.736	1
GALNT7	Amp_2q32.1	0.736	1
PARD6B	PTEN	0.736	1
PARD6B	Amp_2q32.1	0.736	1
PCK1	PTEN	0.736	1
PCK1	Amp_2q32.1	0.736	1
PTEN	SMARCB1	0.736	1
PTEN	WDR52	0.736	1
PTEN	ZFYVE26	0.736	1
SMARCB1	Amp_2q32.1	0.736	1
WDR52	Amp_2q32.1	0.736	1
CDK12	Del_11q23.1	0.737	1
FAM178A	Del_11q23.1	0.737	1
TXNIP	Del_11q23.1	0.737	1
WASL	Del_11q23.1	0.737	1
CXorf23	Del_9p21.3	0.738	1
ECHDC2	Del_9p21.3	0.738	1
FAM178A	3p-Del	0.738	1
GLS	3p-Del	0.738	1
GLS	Del_1p31.1	0.738	1
HSPA2	Del_9p21.3	0.738	1
KIF16B	Del_9p21.3	0.738	1
KLK10	Del_9p21.3	0.738	1
PAM	Del_9p21.3	0.738	1
TXNIP	3p-Del	0.738	1
TXNIP	Del_1p31.1	0.738	1
WASL	3p-Del	0.738	1
WASL	Del_1p31.1	0.738	1
ZNF532	Del_9p21.3	0.738	1
ADAM28	16q-Amp	0.74	1
C16orf78	16q-Amp	0.74	1
CDCA8	16q-Amp	0.74	1
DPYSL4	16q-Amp	0.74	1
IMPA2	16q-Amp	0.74	1
KRAS	TP53	0.74	1
NOM1	TP53	0.74	1
OR10G3	16q-Amp	0.74	1
PODXL	TP53	0.74	1
PRDX5	16q-Amp	0.74	1
PRODH	16q-Amp	0.74	1
SCYL1	16q-Amp	0.74	1
SLC1A7	16q-Amp	0.74	1
SLC23A1	TP53	0.74	1
SPATA13	16q-Amp	0.74	1
Del_2q37.3	Del_3p14.1	0.74	1
CDKN2A	10q-Del	0.741	1
CXorf23	10q-Del	0.741	1
DNAJA3	10q-Del	0.741	1
HSPA2	10q-Del	0.741	1
KIF16B	10q-Del	0.741	1
KLK10	10q-Del	0.741	1
MET	SYNE1	0.741	1
PAM	10q-Del	0.741	1
SYNE1	2q-Amp	0.741	1
ZNF532	10q-Del	0.741	1
ADAM28	Del_1p36.31	0.742	1
ARAP3	3q-Amp	0.742	1
ARAP3	13q-Del	0.742	1
C16orf78	Del_1p36.31	0.742	1
C9orf171	Del_1p36.31	0.742	1
CARKD	Del_1p36.31	0.742	1
CDK12	14q-Del	0.742	1
CSK	3q-Amp	0.742	1
ENO1	3q-Amp	0.742	1
ENO1	13q-Del	0.742	1
FAM178A	14q-Del	0.742	1
FZR1	13q-Del	0.742	1
INPP5E	Del_1p36.31	0.742	1
NEK8	Del_1p36.31	0.742	1
NFE2L2	17p-Del	0.742	1
OR10G3	Del_1p36.31	0.742	1
PDLIM4	Del_1p36.31	0.742	1
PRDX5	Del_1p36.31	0.742	1
PRODH	Del_1p36.31	0.742	1
SLC1A7	Del_1p36.31	0.742	1
SLC23A1	Del_3p26.3	0.742	1
SLC6A14	3q-Amp	0.742	1
SPATA13	Del_1p36.31	0.742	1
TCEB1	3q-Amp	0.742	1
TCEB1	13q-Del	0.742	1
ZC3H3	3q-Amp	0.742	1
3q-Amp	Amp_Xq11.2	0.742	1
13q-Del	Amp_Xq11.2	0.742	1
Amp_2q32.1	Del_10q23.31	0.742	1
ATM	Del_1q44	0.743	1
FAT1	Del_1q44	0.743	1
18q-Del	Amp_2q32.1	0.743	1
MTOR	6p-Del	0.744	1
AR	CACNA1C	0.745	1
ARHGAP35	16q-Amp	0.745	1
CACNA1C	NIPBL	0.745	1
CACNA1C	PIK3CA	0.745	1
CACNA1C	STAG2	0.745	1
CSF1R	16q-Amp	0.745	1
KIAA0922	SYNE1	0.745	1
KIAA0922	16q-Amp	0.745	1
NEFH	17p-Amp	0.745	1
NFE2L2	17p-Amp	0.745	1
NIPBL	PIK3CA	0.745	1
NIPBL	STAG2	0.745	1
PIK3CA	STAG2	0.745	1
PRKAG2	16q-Amp	0.745	1
PTCH1	SYNE1	0.745	1
SMARCA4	TP53	0.745	1
SYNE1	5q-Amp	0.745	1
14q-Del	6p-Del	0.745	1
ACSF2	Del_1q44	0.746	1
ALMS1	CUL3	0.746	1
ALMS1	Del_16q23.3	0.746	1
CUL3	ZNF814	0.746	1
NF2	ZNF814	0.746	1
RAI1	Del_1q44	0.746	1
CYP2C18	VHL	0.747	1
F2RL1	VHL	0.747	1
IFNB1	VHL	0.747	1
KCNK1	VHL	0.747	1
NDUFA3	VHL	0.747	1
NKX2-1	VHL	0.747	1
ONECUT2	VHL	0.747	1
RALB	VHL	0.747	1
RCN1	VHL	0.747	1
RIN1	VHL	0.747	1
RNF113B	VHL	0.747	1
SLC14A1	VHL	0.747	1
TMEM47	VHL	0.747	1
VHL	ZNHIT1	0.747	1
CSF1R	Del_1p36.31	0.748	1
EGFR	Del_1p36.31	0.748	1
FAT1	Amp_7q31.2	0.748	1
KIAA0922	Del_1p36.31	0.748	1
NEFH	5q-Amp	0.748	1
NFE2L2	5q-Amp	0.748	1
PTCH1	Del_1p36.31	0.748	1
PTEN	Del_11q23.1	0.748	1
ENO1	Del_3p14.1	0.749	1
FZR1	Del_3p14.1	0.749	1
ZC3H3	Del_3p14.1	0.749	1
Amp_Xq11.2	Del_3p14.1	0.749	1
ACSF2	ATM	0.75	1
ACSF2	FAT1	0.75	1
ACSF2	SMARCA4	0.75	1
ARAP3	Del_2q22.1	0.75	1
ATM	DNMT3A	0.75	1
ATM	8p-Del	0.75	1
ATM	Del_13q13.2	0.75	1
CDKN2A	Del_2q37.3	0.75	1
CXorf23	Del_2q37.3	0.75	1
DNAJA3	Del_2q37.3	0.75	1
DNMT3A	FAT1	0.75	1
ECHDC2	Del_2q37.3	0.75	1
FAM178A	Amp_5q35.1	0.75	1
FAT1	RAI1	0.75	1
FAT1	8p-Del	0.75	1
FZR1	Del_2q22.1	0.75	1
HSPA2	Del_2q37.3	0.75	1
KIF16B	Del_2q37.3	0.75	1
KLK10	Del_2q37.3	0.75	1
PAM	Del_2q37.3	0.75	1
PBRM1	5q-Amp	0.75	1
RAI1	SMARCA4	0.75	1
STAG2	18p-Del	0.75	1
TCEB1	Del_2q22.1	0.75	1
TXNIP	Amp_5q35.1	0.75	1
VCL	Del_2q37.3	0.75	1
WASL	Amp_5q35.1	0.75	1
ZC3H3	Del_2q22.1	0.75	1
ZNF532	Del_2q37.3	0.75	1
ACSF2	17q-Amp	0.751	1
ADAM28	Del_14q31.1	0.751	1
C9orf171	Del_14q31.1	0.751	1
CDCA8	Del_14q31.1	0.751	1
CSF1R	VHL	0.751	1
EGFR	VHL	0.751	1
NEK8	Del_14q31.1	0.751	1
PBRM1	Del_9p23	0.751	1
PDLIM4	Del_14q31.1	0.751	1
PRDX5	Del_14q31.1	0.751	1
PRODH	Del_14q31.1	0.751	1
PTCH1	VHL	0.751	1
RAI1	17q-Amp	0.751	1
SLC1A7	Del_14q31.1	0.751	1
SPATA13	Del_14q31.1	0.751	1
ACSF2	8p-Del	0.752	1
ACSF2	Del_9p23	0.752	1
ACSF2	Del_13q13.2	0.752	1
DNMT3A	Del_9p23	0.752	1
FGFR3	Del_4q34.3	0.752	1
KRAS	Del_4q34.3	0.752	1
NOM1	Del_4q34.3	0.752	1
PARD6B	12p-Amp	0.752	1
PCK1	12p-Amp	0.752	1
RAI1	8p-Del	0.752	1
RAI1	Del_9p23	0.752	1
RAI1	Del_13q13.2	0.752	1
ZFYVE26	12p-Amp	0.752	1
ADCY8	2q-Amp	0.753	1
CDK12	KDM5C	0.753	1
FAM178A	KDM5C	0.753	1
GALNT7	MET	0.753	1
GALNT7	2q-Amp	0.753	1
KDM5C	TXNIP	0.753	1
KDM5C	WASL	0.753	1
MET	PARD6B	0.753	1
MET	SMARCB1	0.753	1
MET	WDR52	0.753	1
MET	ZFYVE26	0.753	1
PARD6B	2q-Amp	0.753	1
PCK1	2q-Amp	0.753	1
SMARCB1	2q-Amp	0.753	1
WDR52	2q-Amp	0.753	1
3q-Del	Del_8p23.2	0.753	1
ARID1A	NEFH	0.754	1
ARID1A	NFE2L2	0.754	1
ARID1A	PCF11	0.754	1
CACNA1C	6q-Del	0.754	1
CSK	18q-Del	0.754	1
FZR1	18q-Del	0.754	1
NEFH	5p-Amp	0.754	1
NEFH	9q-Del	0.754	1
NFE2L2	5p-Amp	0.754	1
PCF11	9q-Del	0.754	1
SLC6A14	18q-Del	0.754	1
STAG2	6q-Del	0.754	1
SYNE1	5p-Amp	0.754	1
TCEB1	18q-Del	0.754	1
FGFR3	17q-Amp	0.755	1
KDM6A	Del_14q31.1	0.755	1
KRAS	17q-Amp	0.755	1
MET	3q-Amp	0.755	1
NTRK3	17q-Amp	0.755	1
12q-Amp	18p-Del	0.755	1
CYP2C18	Del_3p14.1	0.756	1
F2RL1	Del_3p14.1	0.756	1
IFNB1	Del_3p14.1	0.756	1
NKX2-1	Del_3p14.1	0.756	1
RALB	Del_3p14.1	0.756	1
RCN1	Del_3p14.1	0.756	1
RNF113B	Del_3p14.1	0.756	1
RNF144A	Del_3p14.1	0.756	1
SLC14A1	Del_3p14.1	0.756	1
ZNHIT1	Del_3p14.1	0.756	1
CDKN2A	Del_1q44	0.757	1
CXorf23	Del_1q44	0.757	1
DNAJA3	Del_1q44	0.757	1
ECHDC2	Del_1q44	0.757	1
HSPA2	Del_1q44	0.757	1
KIF16B	Del_1q44	0.757	1
KLK10	Del_1q44	0.757	1
PAM	Del_1q44	0.757	1
VCL	Del_1q44	0.757	1
ZNF532	Del_1q44	0.757	1
NF2	17q-Amp	0.758	1
FAM178A	Amp_7q31.2	0.759	1
NEFH	SETD2	0.759	1
NEFH	9p-Del	0.759	1
PCF11	9p-Del	0.759	1
Amp_17q24.3	Del_11q23.1	0.759	1
ALMS1	CACNA1C	0.76	1
ALMS1	NIPBL	0.76	1
ALMS1	STAG2	0.76	1
ARID1A	Del_3p12.2	0.76	1
CACNA1C	ZNF814	0.76	1
CDKN2A	Del_13q13.2	0.76	1
CXorf23	8p-Del	0.76	1
CXorf23	Del_9p23	0.76	1
CXorf23	Del_13q13.2	0.76	1
DNAJA3	8p-Del	0.76	1
DNAJA3	Del_9p23	0.76	1
DNAJA3	Del_13q13.2	0.76	1
ECHDC2	Del_9p23	0.76	1
ECHDC2	Del_13q13.2	0.76	1
HSPA2	8p-Del	0.76	1
HSPA2	Del_9p23	0.76	1
HSPA2	Del_13q13.2	0.76	1
KIF16B	Del_9p23	0.76	1
KIF16B	Del_13q13.2	0.76	1
KLK10	8p-Del	0.76	1
KLK10	Del_9p23	0.76	1
KLK10	Del_13q13.2	0.76	1
NIPBL	ZNF814	0.76	1
PAM	8p-Del	0.76	1
PAM	Del_9p23	0.76	1
PAM	Del_13q13.2	0.76	1
PIK3CA	ZNF814	0.76	1
STAG2	ZNF814	0.76	1
VCL	8p-Del	0.76	1
VCL	Del_13q13.2	0.76	1
ZNF532	8p-Del	0.76	1
ZNF532	Del_9p23	0.76	1
ZNF532	Del_13q13.2	0.76	1
ARHGAP33	Del_3p12.2	0.761	1
CDK12	PTEN	0.761	1
CDK12	Amp_2q32.1	0.761	1
FAM178A	PTEN	0.761	1
GLS	PTEN	0.761	1
GLS	Amp_2q32.1	0.761	1
NASP	Del_3p12.2	0.761	1
PTEN	WASL	0.761	1
RILPL1	Del_3p12.2	0.761	1
RIMBP3	Del_3p12.2	0.761	1
TXNIP	Amp_2q32.1	0.761	1
WASL	Amp_2q32.1	0.761	1
CUL3	KDM6A	0.762	1
KDM6A	NF2	0.762	1
KDM6A	Del_16q23.3	0.762	1
ZNF532	Del_3p21.2	0.762	1
12p-Amp	Del_16q23.3	0.762	1
ACSF2	Amp_3q26.32	0.763	1
CSF1R	Del_14q31.1	0.763	1
DNMT3A	Amp_3q26.32	0.763	1
KIAA0922	Del_14q31.1	0.763	1
PTCH1	Del_14q31.1	0.763	1
5q-Amp	14q-Del	0.763	1
Del_3p21.2	Del_10q23.31	0.763	1
ARID1A	16q-Amp	0.764	1
FAT1	Amp_3q26.32	0.764	1
FGFR3	MTOR	0.764	1
FGFR3	3q-Del	0.764	1
KRAS	MTOR	0.764	1
KRAS	3q-Del	0.764	1
MTOR	NOM1	0.764	1
MTOR	NTRK3	0.764	1
MTOR	PODXL	0.764	1
NOM1	3q-Del	0.764	1
NTRK3	3q-Del	0.764	1
PODXL	3q-Del	0.764	1
ATM	Del_4q34.3	0.765	1
CACNA1C	3p-Del	0.765	1
NEFH	21q-Del	0.765	1
NFE2L2	21q-Del	0.765	1
NIPBL	3p-Del	0.765	1
5q-Amp	3p-Del	0.765	1
ADAM28	Del_1p31.1	0.766	1
ADCY8	1p-Del	0.766	1
C16orf78	Del_1p31.1	0.766	1
C9orf171	Del_1p31.1	0.766	1
CARKD	Del_1p31.1	0.766	1
CDCA8	Del_1p31.1	0.766	1
CDK12	6q-Del	0.766	1
CSF1R	Del_11q23.1	0.766	1
CXorf23	Amp_3q26.32	0.766	1
DNAJA3	Amp_3q26.32	0.766	1
ECHDC2	Amp_3q26.32	0.766	1
EGFR	Del_11q23.1	0.766	1
FAM178A	6q-Del	0.766	1
GALNT7	12q-Amp	0.766	1
GLS	6q-Del	0.766	1
HSPA2	Amp_3q26.32	0.766	1
INPP5E	Del_1p31.1	0.766	1
KIAA0922	Del_11q23.1	0.766	1
KIF16B	Amp_3q26.32	0.766	1
KLK10	Amp_3q26.32	0.766	1
NEK8	Del_1p31.1	0.766	1
OR10G3	Del_1p31.1	0.766	1
PARD6B	12q-Amp	0.766	1
PCK1	12q-Amp	0.766	1
PDLIM4	Del_1p31.1	0.766	1
PRDX5	Del_1p31.1	0.766	1
PRKAG2	Del_11q23.1	0.766	1
PRODH	Del_1p31.1	0.766	1
PTCH1	Del_11q23.1	0.766	1
SCYL1	Del_1p31.1	0.766	1
SLC1A7	Del_1p31.1	0.766	1
SMARCB1	12q-Amp	0.766	1
SPATA13	Del_1p31.1	0.766	1
VCL	Amp_3q26.32	0.766	1
WASL	6q-Del	0.766	1
ZFYVE26	12q-Amp	0.766	1
ZNF532	Amp_3q26.32	0.766	1
Del_1p31.1	Del_3p14.1	0.766	1
ALMS1	Amp_5q35.1	0.767	1
CSK	18p-Del	0.767	1
PCF11	7q-Amp	0.767	1
SLC6A14	18p-Del	0.767	1
TCEB1	18p-Del	0.767	1
MTOR	14q-Del	0.768	1
PARD6B	Del_3p12.2	0.768	1
ADAM28	14q-Del	0.769	1
C9orf171	14q-Del	0.769	1
CDCA8	14q-Del	0.769	1
KDM5C	14q-Del	0.769	1
NEK8	14q-Del	0.769	1
PDLIM4	14q-Del	0.769	1
PRDX5	14q-Del	0.769	1
PRODH	14q-Del	0.769	1
SLC1A7	14q-Del	0.769	1
SPATA13	14q-Del	0.769	1
ADCY8	6p-Del	0.77	1
ATM	BCLAF1	0.77	1
BCLAF1	SMARCA4	0.77	1
EPS15L1	FAT1	0.77	1
EPS15L1	SMARCA4	0.77	1
EPS15L1	VHL	0.77	1
GALNT7	6p-Del	0.77	1
MET	Del_1p36.31	0.77	1
PARD6B	6p-Del	0.77	1
PBRM1	5p-Amp	0.77	1
PRKAG2	Del_3p14.1	0.77	1
18p-Del	Amp_2q32.1	0.77	1
ARHGAP33	PBRM1	0.771	1
FAT1	7q-Amp	0.771	1
NASP	PBRM1	0.771	1
NEFH	7p-Amp	0.771	1
PBRM1	ZNF438	0.771	1
PCF11	16q-Amp	0.771	1
PCF11	7p-Amp	0.771	1
ACSF2	ARID1A	0.772	1
ARID1A	DNMT3A	0.772	1
ARID1A	RAI1	0.772	1
NIPBL	3p-Amp	0.772	1
10q-Del	Amp_2q32.1	0.772	1
ADAM28	Amp_5q35.1	0.773	1
C9orf171	Amp_5q35.1	0.773	1
CARKD	Amp_5q35.1	0.773	1
CDCA8	Amp_5q35.1	0.773	1
CDKN2A	17p-Del	0.773	1
CXorf23	17p-Del	0.773	1
DNAJA3	17p-Del	0.773	1
DPYSL4	Amp_5q35.1	0.773	1
ECHDC2	17p-Del	0.773	1
HSPA2	17p-Del	0.773	1
KIF16B	17p-Del	0.773	1
KLK10	17p-Del	0.773	1
OR10G3	Amp_5q35.1	0.773	1
PAM	17p-Del	0.773	1
PRDX5	Amp_5q35.1	0.773	1
PRODH	Amp_5q35.1	0.773	1
RAI1	17p-Del	0.773	1
SCYL1	Amp_5q35.1	0.773	1
SLC1A7	Amp_5q35.1	0.773	1
SPATA13	Amp_5q35.1	0.773	1
VCL	17p-Del	0.773	1
ZNF532	17p-Del	0.773	1
ALMS1	ZNF814	0.774	1
CYP2C18	3p-Del	0.774	1
F2RL1	3p-Del	0.774	1
FAM178A	7q-Amp	0.774	1
IFNB1	3p-Del	0.774	1
NKX2-1	3p-Del	0.774	1
RALB	3p-Del	0.774	1
RCN1	3p-Del	0.774	1
RNF113B	3p-Del	0.774	1
RNF144A	3p-Del	0.774	1
SLC14A1	3p-Del	0.774	1
ZNHIT1	3p-Del	0.774	1
ADCY8	Del_8p23.2	0.775	1
ADCY8	Del_10q23.31	0.775	1
AR	KDM6A	0.775	1
AR	NF1	0.775	1
CACNA1C	KDM6A	0.775	1
FAT1	7p-Amp	0.775	1
GALNT7	Del_10q23.31	0.775	1
KDM6A	PIK3CA	0.775	1
NF1	PIK3CA	0.775	1
NF1	STAG2	0.775	1
TXNIP	Del_3p21.2	0.775	1
ZNF814	18p-Del	0.775	1
CDKN2A	5q-Amp	0.776	1
CXorf23	5q-Amp	0.776	1
DNAJA3	5q-Amp	0.776	1
FGFR3	16p-Amp	0.776	1
KIF16B	5q-Amp	0.776	1
KLK10	5q-Amp	0.776	1
NTRK3	16p-Amp	0.776	1
PAM	5q-Amp	0.776	1
PODXL	16p-Amp	0.776	1
SLC23A1	16p-Amp	0.776	1
VCL	5q-Amp	0.776	1
ZNF532	5q-Amp	0.776	1
FAM178A	7p-Amp	0.777	1
KRAS	SYNE1	0.777	1
NOM1	SYNE1	0.777	1
PODXL	SYNE1	0.777	1
ATM	17p-Del	0.778	1
BRAF	TP53	0.778	1
CDK12	2q-Amp	0.778	1
CUL3	NEFH	0.778	1
CUL3	NFE2L2	0.778	1
CUL3	PCF11	0.778	1
EDIL3	TP53	0.778	1
GLS	MET	0.778	1
GLS	2q-Amp	0.778	1
MET	TXNIP	0.778	1
MET	WASL	0.778	1
MYF6	TP53	0.778	1
NEFH	Del_16q23.3	0.778	1
NF2	PCF11	0.778	1
NUDT11	TP53	0.778	1
PCF11	Del_16q23.3	0.778	1
RILPL1	TP53	0.778	1
STXBP3	TP53	0.778	1
TP53	ZNF438	0.778	1
TXNIP	2q-Amp	0.778	1
WASL	2q-Amp	0.778	1
ARAP3	3p-Amp	0.779	1
CDKN2A	5p-Amp	0.779	1
CDKN2A	9q-Del	0.779	1
CSK	3p-Amp	0.779	1
CXorf23	5p-Amp	0.779	1
CXorf23	9q-Del	0.779	1
DNAJA3	5p-Amp	0.779	1
DNAJA3	9q-Del	0.779	1
DNMT3A	16p-Amp	0.779	1
ECHDC2	9q-Del	0.779	1
FZR1	3p-Amp	0.779	1
FZR1	3p-Del	0.779	1
GALNT7	20p-Amp	0.779	1
HSPA2	9q-Del	0.779	1
KIF16B	5p-Amp	0.779	1
KLK10	5p-Amp	0.779	1
KLK10	9q-Del	0.779	1
PAM	5p-Amp	0.779	1
PAM	9q-Del	0.779	1
PARD6B	20p-Amp	0.779	1
SLC6A14	3p-Amp	0.779	1
SLC6A14	3p-Del	0.779	1
SMARCB1	20p-Amp	0.779	1
TCEB1	3p-Amp	0.779	1
VCL	5p-Amp	0.779	1
VCL	9q-Del	0.779	1
ZC3H3	3p-Amp	0.779	1
ZC3H3	3p-Del	0.779	1
ZFYVE26	20p-Amp	0.779	1
ZNF532	5p-Amp	0.779	1
ZNF532	9q-Del	0.779	1
3p-Amp	Amp_Xq11.2	0.779	1
CSF1R	KDM5C	0.78	1
EGFR	KDM5C	0.78	1
KDM5C	KIAA0922	0.78	1
KDM6A	18q-Del	0.78	1
MET	18q-Del	0.78	1
NF1	18q-Del	0.78	1
2q-Amp	18q-Del	0.78	1
7p-Amp	Amp_5q35.1	0.78	1
ADCY8	PBRM1	0.781	1
PARD6B	PBRM1	0.781	1
PBRM1	PCK1	0.781	1
PBRM1	SMARCB1	0.781	1
ADAM28	6q-Del	0.782	1
C16orf78	6q-Del	0.782	1
C9orf171	6q-Del	0.782	1
CARKD	6q-Del	0.782	1
CDCA8	6q-Del	0.782	1
FGFR3	17p-Amp	0.782	1
IMPA2	6q-Del	0.782	1
INPP5E	6q-Del	0.782	1
KRAS	17p-Amp	0.782	1
NEK8	6q-Del	0.782	1
NTRK3	17p-Amp	0.782	1
OR10G3	6q-Del	0.782	1
PDLIM4	6q-Del	0.782	1
PRDX5	6q-Del	0.782	1
SCYL1	6q-Del	0.782	1
SPATA13	6q-Del	0.782	1
ZNF532	Del_3p26.3	0.782	1
CDKN2A	SETD2	0.783	1
CDKN2A	9p-Del	0.783	1
CXorf23	SETD2	0.783	1
CXorf23	9p-Del	0.783	1
DNAJA3	SETD2	0.783	1
DNAJA3	9p-Del	0.783	1
ECHDC2	SETD2	0.783	1
ECHDC2	9p-Del	0.783	1
F2RL1	Amp_7q31.2	0.783	1
HSPA2	SETD2	0.783	1
HSPA2	9p-Del	0.783	1
IFNB1	Amp_7q31.2	0.783	1
KCNK1	Amp_7q31.2	0.783	1
KIF16B	9p-Del	0.783	1
KLK10	SETD2	0.783	1
KLK10	9p-Del	0.783	1
ONECUT2	Amp_7q31.2	0.783	1
PAM	SETD2	0.783	1
PAM	9p-Del	0.783	1
RALB	Amp_7q31.2	0.783	1
RIN1	Amp_7q31.2	0.783	1
RNF113B	Amp_7q31.2	0.783	1
RNF144A	Amp_7q31.2	0.783	1
SETD2	VCL	0.783	1
SETD2	ZNF532	0.783	1
TMEM47	Amp_7q31.2	0.783	1
ZNF532	9p-Del	0.783	1
ZNHIT1	Amp_7q31.2	0.783	1
18p-Del	3p-Del	0.783	1
ACSF2	9q-Del	0.784	1
DNMT3A	9q-Del	0.784	1
FAT1	MTOR	0.784	1
FAT1	3q-Del	0.784	1
GALNT7	20q-Amp	0.784	1
GPR50	Amp_17q24.3	0.784	1
MTOR	SMARCA4	0.784	1
MYF6	Amp_17q24.3	0.784	1
NASP	Amp_17q24.3	0.784	1
NF2	Del_3p21.2	0.784	1
NUDT11	Amp_17q24.3	0.784	1
PARD6B	20q-Amp	0.784	1
RAI1	5p-Amp	0.784	1
RAI1	9q-Del	0.784	1
RILPL1	Amp_17q24.3	0.784	1
SMARCB1	20q-Amp	0.784	1
ZFYVE26	20q-Amp	0.784	1
BCLAF1	8p-Del	0.785	1
FAT1	5q-Amp	0.785	1
SMARCA4	5q-Amp	0.785	1
CDKN2A	21q-Del	0.786	1
CXorf23	21q-Del	0.786	1
DNAJA3	21q-Del	0.786	1
ECHDC2	21q-Del	0.786	1
FAT1	Amp_5q35.1	0.786	1
HSPA2	21q-Del	0.786	1
KIF16B	21q-Del	0.786	1
KLK10	21q-Del	0.786	1
VCL	21q-Del	0.786	1
ZNF532	21q-Del	0.786	1
ACSF2	17p-Amp	0.787	1
EGFR	Del_1p31.1	0.787	1
KIAA0922	Del_1p31.1	0.787	1
NF1	Del_1p31.1	0.787	1
PRKAG2	Del_1p31.1	0.787	1
PTCH1	Del_1p31.1	0.787	1
RAI1	17p-Amp	0.787	1
ARHGAP35	PTEN	0.788	1
CSF1R	PTEN	0.788	1
CSF1R	Amp_2q32.1	0.788	1
EGFR	PTEN	0.788	1
EGFR	Amp_2q32.1	0.788	1
GALNT7	Del_9p21.3	0.788	1
KIAA0922	PTEN	0.788	1
KIAA0922	Amp_2q32.1	0.788	1
PRKAG2	PTEN	0.788	1
PRKAG2	Amp_2q32.1	0.788	1
PTCH1	PTEN	0.788	1
PTCH1	Amp_2q32.1	0.788	1
SMARCB1	Del_9p21.3	0.788	1
WDR52	Del_9p21.3	0.788	1
ZFYVE26	Del_9p21.3	0.788	1
BRAF	Del_4q34.3	0.789	1
EDIL3	Del_4q34.3	0.789	1
F2RL1	7q-Amp	0.789	1
GPR50	Del_4q34.3	0.789	1
IFNB1	7q-Amp	0.789	1
KCNK1	7q-Amp	0.789	1
KDM6A	ZNF814	0.789	1
MYF6	Del_4q34.3	0.789	1
NASP	Del_4q34.3	0.789	1
NF1	ZNF814	0.789	1
NUDT11	Del_4q34.3	0.789	1
ONECUT2	7q-Amp	0.789	1
PCF11	3q-Amp	0.789	1
RALB	7q-Amp	0.789	1
RILPL1	Del_4q34.3	0.789	1
RIMBP3	Del_4q34.3	0.789	1
RIN1	7q-Amp	0.789	1
RNF113B	7q-Amp	0.789	1
RNF144A	7q-Amp	0.789	1
STXBP3	Del_4q34.3	0.789	1
TMEM47	7q-Amp	0.789	1
ZNF438	Del_4q34.3	0.789	1
ZNF521	Del_4q34.3	0.789	1
ZNHIT1	7q-Amp	0.789	1
ACSF2	9p-Del	0.79	1
ADCY8	ATM	0.79	1
ADCY8	FAT1	0.79	1
ARID1A	EPS15L1	0.79	1
ATM	PARD6B	0.79	1
ATM	PCK1	0.79	1
CUL3	Del_8p23.2	0.79	1
DNMT3A	9p-Del	0.79	1
FAT1	GALNT7	0.79	1
FAT1	PARD6B	0.79	1
FAT1	PCK1	0.79	1
FAT1	SMARCB1	0.79	1
FAT1	WDR52	0.79	1
FAT1	ZFYVE26	0.79	1
GALNT7	SMARCA4	0.79	1
NF2	Del_8p23.2	0.79	1
RAI1	9p-Del	0.79	1
SMARCA4	SMARCB1	0.79	1
SMARCA4	WDR52	0.79	1
Del_8p23.2	Del_16q23.3	0.79	1
AR	NEFH	0.791	1
AR	NFE2L2	0.791	1
CACNA1C	NEFH	0.791	1
CACNA1C	NFE2L2	0.791	1
CACNA1C	PCF11	0.791	1
CSF1R	14q-Del	0.791	1
F2RL1	7p-Amp	0.791	1
FGFR3	Del_6q26	0.791	1
IFNB1	7p-Amp	0.791	1
KCNK1	7p-Amp	0.791	1
KDM6A	14q-Del	0.791	1
KIAA0922	14q-Del	0.791	1
NDUFA3	7p-Amp	0.791	1
NEFH	NIPBL	0.791	1
NEFH	PIK3CA	0.791	1
NEFH	STAG2	0.791	1
NFE2L2	NIPBL	0.791	1
NFE2L2	PIK3CA	0.791	1
NTRK3	Del_6q26	0.791	1
ONECUT2	7p-Amp	0.791	1
PCF11	STAG2	0.791	1
PTCH1	14q-Del	0.791	1
RALB	7p-Amp	0.791	1
RIN1	7p-Amp	0.791	1
RNF113B	7p-Amp	0.791	1
RNF144A	7p-Amp	0.791	1
SLC23A1	Del_6q26	0.791	1
SYNE1	Del_8p23.2	0.791	1
TMEM47	7p-Amp	0.791	1
TP53	12p-Amp	0.791	1
ZNHIT1	7p-Amp	0.791	1
16q-Amp	Del_11q23.1	0.791	1
CACNA1C	12p-Amp	0.792	1
NEFH	Del_14q31.1	0.792	1
NFE2L2	Del_14q31.1	0.792	1
SMARCA4	5p-Amp	0.792	1
ADCY8	10q-Del	0.793	1
ARAP3	Amp_7q31.2	0.793	1
ENO1	Amp_7q31.2	0.793	1
FZR1	Amp_7q31.2	0.793	1
GALNT7	10q-Del	0.793	1
SYNE1	7p-Amp	0.793	1
ZC3H3	Amp_7q31.2	0.793	1
Amp_7q31.2	Amp_Xq11.2	0.793	1
MET	20p-Amp	0.794	1
10q-Del	3p-Del	0.794	1
ACSF2	CUL3	0.795	1
ACSF2	NF2	0.795	1
ACSF2	Del_16q23.3	0.795	1
ALMS1	3p-Amp	0.795	1
CUL3	DNMT3A	0.795	1
CUL3	RAI1	0.795	1
DNMT3A	NF2	0.795	1
DNMT3A	Del_16q23.3	0.795	1
EPS15L1	Amp_3q26.32	0.795	1
NF2	RAI1	0.795	1
RAI1	21q-Del	0.795	1
RAI1	Del_16q23.3	0.795	1
ZNF814	3p-Amp	0.795	1
KRAS	Del_11q23.1	0.796	1
MTOR	Del_4q34.3	0.796	1
NOM1	Del_11q23.1	0.796	1
NTRK3	Del_11q23.1	0.796	1
SLC23A1	Del_11q23.1	0.796	1
20p-Amp	Amp_5q35.1	0.796	1
20p-Amp	Del_16q23.3	0.796	1
3p-Del	Del_10q23.31	0.796	1
3q-Del	Del_2q22.1	0.796	1
3q-Del	Del_4q34.3	0.796	1
ARHGAP35	Amp_5q35.1	0.797	1
GALNT7	Amp_17q24.3	0.797	1
PTCH1	Amp_5q35.1	0.797	1
PTEN	3p-Amp	0.797	1
SETD2	9q-Del	0.797	1
SMARCB1	Amp_17q24.3	0.797	1
5p-Amp	9p-Del	0.797	1
14q-Del	6q-Del	0.797	1
ADAM28	12p-Amp	0.798	1
C9orf171	12p-Amp	0.798	1
CDCA8	12p-Amp	0.798	1
IMPA2	12p-Amp	0.798	1
INPP5E	12p-Amp	0.798	1
OR10G3	12p-Amp	0.798	1
PDLIM4	12p-Amp	0.798	1
PRDX5	12p-Amp	0.798	1
SCYL1	12p-Amp	0.798	1
SPATA13	12p-Amp	0.798	1
ATM	SETD2	0.799	1
CDKN2A	3q-Amp	0.799	1
CDKN2A	13q-Del	0.799	1
CXorf23	3q-Amp	0.799	1
CXorf23	13q-Del	0.799	1
DNAJA3	3q-Amp	0.799	1
DNAJA3	13q-Del	0.799	1
DNMT3A	Del_6q26	0.799	1
ECHDC2	3q-Amp	0.799	1
ECHDC2	13q-Del	0.799	1
FAT1	17q-Amp	0.799	1
HSPA2	3q-Amp	0.799	1
HSPA2	13q-Del	0.799	1
KDM6A	18p-Del	0.799	1
KIF16B	3q-Amp	0.799	1
KIF16B	13q-Del	0.799	1
KLK10	3q-Amp	0.799	1
KLK10	13q-Del	0.799	1
NF1	18p-Del	0.799	1
PAM	13q-Del	0.799	1
SYNE1	20p-Amp	0.799	1
VCL	3q-Amp	0.799	1
VCL	13q-Del	0.799	1
ZNF532	3q-Amp	0.799	1
ZNF532	13q-Del	0.799	1
ARHGAP33	MTOR	0.8	1
ARID1A	Amp_17q24.3	0.8	1
BRAF	MTOR	0.8	1
BRAF	3q-Del	0.8	1
EDIL3	MTOR	0.8	1
EDIL3	3q-Del	0.8	1
FGFR3	16q-Amp	0.8	1
GPR50	MTOR	0.8	1
GPR50	3q-Del	0.8	1
MTOR	MYF6	0.8	1
MTOR	NUDT11	0.8	1
MTOR	RILPL1	0.8	1
MTOR	RIMBP3	0.8	1
MTOR	STXBP3	0.8	1
MTOR	ZNF438	0.8	1
MTOR	ZNF521	0.8	1
MYF6	3q-Del	0.8	1
NFE2L2	Del_2q22.1	0.8	1
NTRK3	16q-Amp	0.8	1
NUDT11	3q-Del	0.8	1
PODXL	16q-Amp	0.8	1
RILPL1	3q-Del	0.8	1
RIMBP3	3q-Del	0.8	1
SLC23A1	16q-Amp	0.8	1
STXBP3	3q-Del	0.8	1
ZNF438	3q-Del	0.8	1
ZNF521	3q-Del	0.8	1
MET	20q-Amp	0.801	1
20q-Amp	Del_16q23.3	0.801	1
KDM6A	NF1	0.802	1
PBRM1	Del_4q34.3	0.802	1
ALMS1	NEFH	0.803	1
ALMS1	PCF11	0.803	1
ARAP3	7q-Amp	0.803	1
ARHGAP35	MET	0.803	1
CSF1R	MET	0.803	1
CSF1R	2q-Amp	0.803	1
EGFR	MET	0.803	1
EGFR	2q-Amp	0.803	1
ENO1	7q-Amp	0.803	1
FZR1	7q-Amp	0.803	1
KIAA0922	2q-Amp	0.803	1
MET	PTCH1	0.803	1
NEFH	ZNF814	0.803	1
NFE2L2	ZNF814	0.803	1
NOM1	Del_1p36.31	0.803	1
PCF11	ZNF814	0.803	1
PODXL	Del_1p36.31	0.803	1
PRKAG2	2q-Amp	0.803	1
PTCH1	2q-Amp	0.803	1
ZC3H3	7q-Amp	0.803	1
7q-Amp	Amp_Xq11.2	0.803	1
FAM178A	Del_3p26.3	0.804	1
FAT1	SYNE1	0.804	1
GLS	Del_3p26.3	0.804	1
SMARCA4	SYNE1	0.804	1
TXNIP	Del_3p26.3	0.804	1
ADAM28	12q-Amp	0.805	1
ADAM28	1p-Del	0.805	1
ARAP3	7p-Amp	0.805	1
ATM	21q-Del	0.805	1
C16orf78	1p-Del	0.805	1
C9orf171	12q-Amp	0.805	1
C9orf171	1p-Del	0.805	1
CARKD	1p-Del	0.805	1
CDCA8	12q-Amp	0.805	1
CDCA8	1p-Del	0.805	1
ENO1	7p-Amp	0.805	1
FZR1	7p-Amp	0.805	1
IMPA2	12q-Amp	0.805	1
IMPA2	1p-Del	0.805	1
INPP5E	12q-Amp	0.805	1
INPP5E	1p-Del	0.805	1
MET	18p-Del	0.805	1
MTOR	18q-Del	0.805	1
NEK8	1p-Del	0.805	1
OR10G3	12q-Amp	0.805	1
OR10G3	1p-Del	0.805	1
PDLIM4	12q-Amp	0.805	1
PDLIM4	1p-Del	0.805	1
PRDX5	12q-Amp	0.805	1
PRDX5	1p-Del	0.805	1
PRKAG2	3p-Del	0.805	1
PRODH	12q-Amp	0.805	1
PRODH	1p-Del	0.805	1
SCYL1	12q-Amp	0.805	1
SCYL1	1p-Del	0.805	1
SLC1A7	12q-Amp	0.805	1
SLC1A7	1p-Del	0.805	1
SPATA13	12q-Amp	0.805	1
SPATA13	1p-Del	0.805	1
ZC3H3	7p-Amp	0.805	1
2q-Amp	18p-Del	0.805	1
7p-Amp	Amp_Xq11.2	0.805	1
Amp_2q32.1	Amp_5q35.1	0.805	1
ACSF2	CACNA1C	0.806	1
ACSF2	NIPBL	0.806	1
ADCY8	Del_2q37.3	0.806	1
AR	DNMT3A	0.806	1
CACNA1C	DNMT3A	0.806	1
CACNA1C	RAI1	0.806	1
CDKN2A	Del_2q22.1	0.806	1
CXorf23	Del_2q22.1	0.806	1
DNAJA3	Del_2q22.1	0.806	1
DNMT3A	NIPBL	0.806	1
DNMT3A	STAG2	0.806	1
ECHDC2	Del_2q22.1	0.806	1
GALNT7	Del_2q37.3	0.806	1
GLS	1p-Del	0.806	1
HSPA2	Del_2q22.1	0.806	1
KIF16B	Del_2q22.1	0.806	1
KLK10	Del_2q22.1	0.806	1
PAM	Del_2q22.1	0.806	1
PIK3CA	RAI1	0.806	1
RAI1	STAG2	0.806	1
SMARCB1	Del_2q37.3	0.806	1
SYNE1	20q-Amp	0.806	1
TXNIP	1p-Del	0.806	1
VCL	Del_2q22.1	0.806	1
WASL	12q-Amp	0.806	1
WDR52	Del_2q37.3	0.806	1
ZNF532	Del_2q22.1	0.806	1
ADAM28	6p-Del	0.807	1
C16orf78	6p-Del	0.807	1
C9orf171	6p-Del	0.807	1
CACNA1C	12q-Amp	0.807	1
CACNA1C	1p-Del	0.807	1
CARKD	6p-Del	0.807	1
CDCA8	6p-Del	0.807	1
FAT1	Del_3p14.1	0.807	1
IMPA2	6p-Del	0.807	1
INPP5E	6p-Del	0.807	1
NEK8	6p-Del	0.807	1
NIPBL	12q-Amp	0.807	1
OR10G3	6p-Del	0.807	1
PDLIM4	6p-Del	0.807	1
PRDX5	6p-Del	0.807	1
SCYL1	6p-Del	0.807	1
SPATA13	6p-Del	0.807	1
STAG2	1p-Del	0.807	1
2q-Amp	Del_9p21.3	0.807	1
18q-Del	3p-Del	0.807	1
SYNE1	16p-Amp	0.808	1
SYNE1	3q-Amp	0.808	1
12p-Amp	18q-Del	0.808	1
ADCY8	ARID1A	0.809	1
AR	7q-Amp	0.809	1
ARID1A	GALNT7	0.809	1
ARID1A	PARD6B	0.809	1
ARID1A	PCK1	0.809	1
ARID1A	SMARCB1	0.809	1
ARID1A	WDR52	0.809	1
ARID1A	ZFYVE26	0.809	1
ATM	6q-Del	0.809	1
CDK12	6p-Del	0.809	1
CDKN2A	18q-Del	0.809	1
CXorf23	18q-Del	0.809	1
DNAJA3	18q-Del	0.809	1
ECHDC2	18q-Del	0.809	1
FGFR3	KDM5C	0.809	1
KDM5C	NOM1	0.809	1
KDM5C	NTRK3	0.809	1
KDM5C	SLC23A1	0.809	1
KLK10	18q-Del	0.809	1
PAM	18q-Del	0.809	1
VCL	18q-Del	0.809	1
WASL	6p-Del	0.809	1
ZNF532	18q-Del	0.809	1
20q-Amp	Amp_5q35.1	0.809	1
ADAM28	Del_8p23.2	0.81	1
ADAM28	Del_10q23.31	0.81	1
ARHGAP33	SYNE1	0.81	1
ARID1A	Amp_3q26.32	0.81	1
BRAF	SYNE1	0.81	1
C16orf78	Del_10q23.31	0.81	1
C9orf171	Del_8p23.2	0.81	1
C9orf171	Del_10q23.31	0.81	1
CARKD	Del_8p23.2	0.81	1
CARKD	Del_10q23.31	0.81	1
CDCA8	Del_8p23.2	0.81	1
CDCA8	Del_10q23.31	0.81	1
DNMT3A	16q-Amp	0.81	1
DPYSL4	Del_8p23.2	0.81	1
EPS15L1	5q-Amp	0.81	1
GPR50	SYNE1	0.81	1
IMPA2	Del_10q23.31	0.81	1
INPP5E	Del_10q23.31	0.81	1
MYF6	SYNE1	0.81	1
NASP	SYNE1	0.81	1
NEK8	Del_8p23.2	0.81	1
NEK8	Del_10q23.31	0.81	1
NUDT11	SYNE1	0.81	1
OR10G3	Del_8p23.2	0.81	1
OR10G3	Del_10q23.31	0.81	1
PDLIM4	Del_10q23.31	0.81	1
PRDX5	Del_8p23.2	0.81	1
PRDX5	Del_10q23.31	0.81	1
PRODH	Del_8p23.2	0.81	1
RILPL1	SYNE1	0.81	1
RIMBP3	SYNE1	0.81	1
SCYL1	Del_8p23.2	0.81	1
SCYL1	Del_10q23.31	0.81	1
SLC1A7	Del_8p23.2	0.81	1
SPATA13	Del_8p23.2	0.81	1
STXBP3	SYNE1	0.81	1
SYNE1	ZNF438	0.81	1
SYNE1	ZNF521	0.81	1
3q-Del	Del_2q37.3	0.81	1
ATM	CDK12	0.811	1
ATM	GLS	0.811	1
ATM	TXNIP	0.811	1
CSF1R	6q-Del	0.811	1
CYP2C18	Del_3p12.2	0.811	1
EGFR	6q-Del	0.811	1
F2RL1	Del_3p12.2	0.811	1
FAT1	TXNIP	0.811	1
FAT1	WASL	0.811	1
GLS	SMARCA4	0.811	1
IFNB1	Del_3p12.2	0.811	1
MET	PTEN	0.811	1
MTOR	6q-Del	0.811	1
NDUFA3	Del_3p12.2	0.811	1
NKX2-1	Del_3p12.2	0.811	1
PRKAG2	6q-Del	0.811	1
RALB	Del_3p12.2	0.811	1
RCN1	Del_3p12.2	0.811	1
RNF113B	Del_3p12.2	0.811	1
RNF144A	Del_3p12.2	0.811	1
SLC14A1	Del_3p12.2	0.811	1
SMARCA4	TXNIP	0.811	1
SMARCA4	WASL	0.811	1
TMEM47	Del_3p12.2	0.811	1
ZNHIT1	Del_3p12.2	0.811	1
ADAM28	20p-Amp	0.812	1
BCLAF1	CUL3	0.812	1
BCLAF1	NF2	0.812	1
CACNA1C	6p-Del	0.812	1
CDCA8	20p-Amp	0.812	1
CUL3	EPS15L1	0.812	1
EPS15L1	Del_16q23.3	0.812	1
OR10G3	20p-Amp	0.812	1
PRDX5	20p-Amp	0.812	1
SCYL1	20p-Amp	0.812	1
SPATA13	20p-Amp	0.812	1
AR	7p-Amp	0.813	1
CDK12	Del_10q23.31	0.813	1
CUL3	Del_6q26	0.813	1
GLS	Del_8p23.2	0.813	1
GLS	Del_10q23.31	0.813	1
TXNIP	Del_8p23.2	0.813	1
WASL	Del_8p23.2	0.813	1
WASL	Del_10q23.31	0.813	1
12p-Amp	Del_11q23.1	0.813	1
ACSF2	Del_1p36.31	0.814	1
ADAM28	20q-Amp	0.814	1
ADCY8	Del_1q44	0.814	1
CDCA8	20q-Amp	0.814	1
EPS15L1	5p-Amp	0.814	1
EPS15L1	9q-Del	0.814	1
GPR50	Del_3p21.2	0.814	1
MYF6	Del_3p21.2	0.814	1
NUDT11	Del_3p21.2	0.814	1
OR10G3	20q-Amp	0.814	1
PARD6B	Del_1q44	0.814	1
PRDX5	20q-Amp	0.814	1
RIMBP3	Del_3p21.2	0.814	1
SCYL1	20q-Amp	0.814	1
SPATA13	20q-Amp	0.814	1
STXBP3	Del_3p21.2	0.814	1
ZNF521	Del_3p21.2	0.814	1
FGFR3	PTEN	0.815	1
FGFR3	Amp_2q32.1	0.815	1
KRAS	PTEN	0.815	1
KRAS	Amp_2q32.1	0.815	1
KRAS	Del_14q31.1	0.815	1
NOM1	PTEN	0.815	1
NOM1	Amp_2q32.1	0.815	1
PODXL	Amp_2q32.1	0.815	1
PTEN	SLC23A1	0.815	1
SLC23A1	Amp_2q32.1	0.815	1
SLC23A1	Del_14q31.1	0.815	1
6p-Del	Del_3p14.1	0.815	1
ACSF2	3q-Amp	0.816	1
ACSF2	13q-Del	0.816	1
CYP2C18	PBRM1	0.816	1
DNMT3A	3q-Amp	0.816	1
F2RL1	PBRM1	0.816	1
IFNB1	PBRM1	0.816	1
KCNK1	PBRM1	0.816	1
KDM6A	NEFH	0.816	1
KDM6A	PCF11	0.816	1
NDUFA3	PBRM1	0.816	1
NEFH	NF1	0.816	1
NF1	PCF11	0.816	1
NKX2-1	PBRM1	0.816	1
ONECUT2	PBRM1	0.816	1
PBRM1	RALB	0.816	1
PBRM1	RCN1	0.816	1
PBRM1	RIN1	0.816	1
PBRM1	RNF113B	0.816	1
PBRM1	SLC14A1	0.816	1
PBRM1	TMEM47	0.816	1
PBRM1	ZNHIT1	0.816	1
RAI1	13q-Del	0.816	1
ADAM28	Del_9p21.3	0.817	1
AR	Del_8p23.2	0.817	1
ARID1A	MTOR	0.817	1
ARID1A	3q-Del	0.817	1
C9orf171	Del_9p21.3	0.817	1
CDCA8	Del_9p21.3	0.817	1
IMPA2	Del_9p21.3	0.817	1
INPP5E	Del_9p21.3	0.817	1
NEK8	Del_9p21.3	0.817	1
OR10G3	Del_9p21.3	0.817	1
PDLIM4	Del_9p21.3	0.817	1
PRDX5	Del_9p21.3	0.817	1
PRODH	Del_9p21.3	0.817	1
SLC1A7	Del_9p21.3	0.817	1
SPATA13	Del_9p21.3	0.817	1
STAG2	Del_8p23.2	0.817	1
ACSF2	ZNF814	0.818	1
CSK	TP53	0.818	1
DNMT3A	ZNF814	0.818	1
FZR1	TP53	0.818	1
NF1	6q-Del	0.818	1
RAI1	ZNF814	0.818	1
TCEB1	TP53	0.818	1
TP53	Amp_Xq11.2	0.818	1
ADAM28	10q-Del	0.819	1
ADCY8	8p-Del	0.819	1
ADCY8	Del_13q13.2	0.819	1
BRAF	17q-Amp	0.819	1
C16orf78	10q-Del	0.819	1
C9orf171	10q-Del	0.819	1
CARKD	10q-Del	0.819	1
CDCA8	10q-Del	0.819	1
CDKN2A	18p-Del	0.819	1
CUL3	TP53	0.819	1
CXorf23	18p-Del	0.819	1
DNAJA3	18p-Del	0.819	1
DPYSL4	10q-Del	0.819	1
ECHDC2	18p-Del	0.819	1
GALNT7	Del_9p23	0.819	1
GPR50	17q-Amp	0.819	1
IMPA2	10q-Del	0.819	1
INPP5E	10q-Del	0.819	1
KLK10	18p-Del	0.819	1
MTOR	3q-Del	0.819	1
MYF6	17q-Amp	0.819	1
NASP	17q-Amp	0.819	1
NEK8	10q-Del	0.819	1
NF2	TP53	0.819	1
NUDT11	17q-Amp	0.819	1
OR10G3	10q-Del	0.819	1
PAM	18p-Del	0.819	1
PDLIM4	10q-Del	0.819	1
PRDX5	10q-Del	0.819	1
RILPL1	17q-Amp	0.819	1
SCYL1	10q-Del	0.819	1
SMARCB1	Del_9p23	0.819	1
SPATA13	10q-Del	0.819	1
VCL	18p-Del	0.819	1
WDR52	8p-Del	0.819	1
WDR52	Del_9p23	0.819	1
WDR52	Del_13q13.2	0.819	1
ZFYVE26	Del_9p23	0.819	1
ZNF532	18p-Del	0.819	1
ALMS1	12p-Amp	0.82	1
BCLAF1	16p-Amp	0.821	1
SYNE1	10q-Del	0.821	1
AR	BCLAF1	0.822	1
AR	20p-Amp	0.822	1
ARID1A	Del_3p21.2	0.822	1
BCLAF1	CACNA1C	0.822	1
BCLAF1	NIPBL	0.822	1
BCLAF1	STAG2	0.822	1
CACNA1C	EPS15L1	0.822	1
CACNA1C	20p-Amp	0.822	1
EPS15L1	NIPBL	0.822	1
EPS15L1	PIK3CA	0.822	1
FAM178A	Del_3p12.2	0.822	1
KIAA0922	Amp_7q31.2	0.822	1
PTCH1	Amp_7q31.2	0.822	1
F2RL1	Amp_17q24.3	0.823	1
IFNB1	Amp_17q24.3	0.823	1
KCNK1	Amp_17q24.3	0.823	1
NDUFA3	Amp_17q24.3	0.823	1
NF2	Del_3p26.3	0.823	1
ONECUT2	Amp_17q24.3	0.823	1
RALB	Amp_17q24.3	0.823	1
RCN1	Amp_17q24.3	0.823	1
RIN1	Amp_17q24.3	0.823	1
RNF113B	Amp_17q24.3	0.823	1
RNF144A	Amp_17q24.3	0.823	1
TMEM47	Amp_17q24.3	0.823	1
ZNHIT1	Amp_17q24.3	0.823	1
EPS15L1	21q-Del	0.824	1
GLS	Del_9p21.3	0.825	1
NEFH	14q-Del	0.825	1
NFE2L2	14q-Del	0.825	1
TXNIP	Del_9p21.3	0.825	1
12p-Amp	Del_4q34.3	0.825	1
ADAM28	Del_2q37.3	0.826	1
C16orf78	Del_2q37.3	0.826	1
C9orf171	Del_2q37.3	0.826	1
DPYSL4	Del_2q37.3	0.826	1
IMPA2	Del_2q37.3	0.826	1
INPP5E	Del_2q37.3	0.826	1
NEK8	Del_2q37.3	0.826	1
OR10G3	Del_2q37.3	0.826	1
PDLIM4	Del_2q37.3	0.826	1
PRDX5	Del_2q37.3	0.826	1
RAI1	Del_2q22.1	0.826	1
SCYL1	Del_2q37.3	0.826	1
SPATA13	Del_2q37.3	0.826	1
AR	20q-Amp	0.827	1
ARHGAP33	Del_11q23.1	0.827	1
BRAF	Del_11q23.1	0.827	1
CACNA1C	20q-Amp	0.827	1
CSK	Del_4q34.3	0.827	1
EDIL3	Del_11q23.1	0.827	1
ENO1	Del_4q34.3	0.827	1
FZR1	Del_4q34.3	0.827	1
MYF6	Del_11q23.1	0.827	1
NASP	Del_11q23.1	0.827	1
NUDT11	Del_11q23.1	0.827	1
PCK1	Amp_3q26.32	0.827	1
PODXL	VHL	0.827	1
SLC6A14	Del_4q34.3	0.827	1
STXBP3	Del_11q23.1	0.827	1
TCEB1	Del_4q34.3	0.827	1
WDR52	Amp_3q26.32	0.827	1
ZFYVE26	Amp_3q26.32	0.827	1
ZNF438	Del_11q23.1	0.827	1
ZNF521	Del_11q23.1	0.827	1
5q-Amp	Del_9p23	0.827	1
Amp_Xq11.2	Del_4q34.3	0.827	1
CUL3	Del_2q37.3	0.828	1
CUL3	Del_3p14.1	0.828	1
FGFR3	MET	0.828	1
FGFR3	2q-Amp	0.828	1
KRAS	MET	0.828	1
KRAS	2q-Amp	0.828	1
MET	NOM1	0.828	1
MET	NTRK3	0.828	1
MET	PODXL	0.828	1
MET	SLC23A1	0.828	1
NOM1	2q-Amp	0.828	1
PODXL	2q-Amp	0.828	1
SLC23A1	2q-Amp	0.828	1
ADCY8	CUL3	0.829	1
ADCY8	NF2	0.829	1
ADCY8	Del_16q23.3	0.829	1
ARID1A	CDK12	0.829	1
ARID1A	FAM178A	0.829	1
ARID1A	TXNIP	0.829	1
ARID1A	WASL	0.829	1
CDK12	10q-Del	0.829	1
CDKN2A	3p-Amp	0.829	1
CUL3	GALNT7	0.829	1
CUL3	PCK1	0.829	1
CUL3	SMARCB1	0.829	1
CUL3	WDR52	0.829	1
CUL3	ZFYVE26	0.829	1
CXorf23	3p-Amp	0.829	1
DNAJA3	3p-Amp	0.829	1
ECHDC2	3p-Amp	0.829	1
GALNT7	NF2	0.829	1
GLS	10q-Del	0.829	1
HSPA2	3p-Amp	0.829	1
KIF16B	3p-Amp	0.829	1
KLK10	3p-Amp	0.829	1
NEFH	PCF11	0.829	1
NF2	PARD6B	0.829	1
NF2	PCK1	0.829	1
NF2	WDR52	0.829	1
NF2	ZFYVE26	0.829	1
NFE2L2	PCF11	0.829	1
PCK1	Del_16q23.3	0.829	1
VCL	3p-Amp	0.829	1
WASL	10q-Del	0.829	1
WDR52	Del_16q23.3	0.829	1
ZFYVE26	Del_16q23.3	0.829	1
ZNF532	3p-Amp	0.829	1
ACSF2	KDM6A	0.83	1
ACSF2	NF1	0.83	1
ALMS1	17q-Amp	0.83	1
DNMT3A	KDM6A	0.83	1
DNMT3A	NF1	0.83	1
EPS15L1	3p-Del	0.83	1
GALNT7	VHL	0.83	1
KDM6A	RAI1	0.83	1
NF1	RAI1	0.83	1
ZNF814	17q-Amp	0.83	1
ADAM28	Del_1q44	0.831	1
C16orf78	Del_1q44	0.831	1
C9orf171	Del_1q44	0.831	1
CARKD	Del_1q44	0.831	1
CDCA8	Del_1q44	0.831	1
IMPA2	Del_1q44	0.831	1
INPP5E	Del_1q44	0.831	1
NEK8	Del_1q44	0.831	1
OR10G3	Del_1q44	0.831	1
PDLIM4	Del_1q44	0.831	1
PRDX5	Del_1q44	0.831	1
PRODH	Del_1q44	0.831	1
RAI1	18q-Del	0.831	1
SCYL1	Del_1q44	0.831	1
SETD2	TP53	0.831	1
SLC1A7	Del_1q44	0.831	1
SPATA13	Del_1q44	0.831	1
MET	Del_1p31.1	0.832	1
MTOR	18p-Del	0.832	1
SMARCA4	Del_11q23.1	0.832	1
12q-Amp	Del_11q23.1	0.832	1
ADAM28	8p-Del	0.833	1
ADAM28	Del_9p23	0.833	1
ADAM28	Del_13q13.2	0.833	1
ALMS1	BCLAF1	0.833	1
ALMS1	EPS15L1	0.833	1
ARHGAP35	ATM	0.833	1
ARHGAP35	FAT1	0.833	1
ARHGAP35	SMARCA4	0.833	1
ATM	CSF1R	0.833	1
ATM	EGFR	0.833	1
ATM	KIAA0922	0.833	1
ATM	PRKAG2	0.833	1
ATM	PTCH1	0.833	1
BCLAF1	ZNF814	0.833	1
C16orf78	8p-Del	0.833	1
C16orf78	Del_13q13.2	0.833	1
C9orf171	8p-Del	0.833	1
C9orf171	Del_9p23	0.833	1
C9orf171	Del_13q13.2	0.833	1
CARKD	8p-Del	0.833	1
CARKD	Del_13q13.2	0.833	1
CDCA8	8p-Del	0.833	1
CDCA8	Del_9p23	0.833	1
CDCA8	Del_13q13.2	0.833	1
CDK12	PBRM1	0.833	1
CSF1R	FAT1	0.833	1
CSF1R	SMARCA4	0.833	1
CUL3	Del_3p12.2	0.833	1
DPYSL4	8p-Del	0.833	1
DPYSL4	Del_13q13.2	0.833	1
EGFR	SMARCA4	0.833	1
FAT1	KIAA0922	0.833	1
FAT1	PRKAG2	0.833	1
FAT1	PTCH1	0.833	1
INPP5E	8p-Del	0.833	1
INPP5E	Del_9p23	0.833	1
INPP5E	Del_13q13.2	0.833	1
KDM5C	5q-Amp	0.833	1
KIAA0922	SMARCA4	0.833	1
NEK8	8p-Del	0.833	1
NEK8	Del_9p23	0.833	1
NEK8	Del_13q13.2	0.833	1
NF2	Del_3p12.2	0.833	1
OR10G3	8p-Del	0.833	1
OR10G3	Del_9p23	0.833	1
OR10G3	Del_13q13.2	0.833	1
PBRM1	WASL	0.833	1
PDLIM4	Del_9p23	0.833	1
PDLIM4	Del_13q13.2	0.833	1
PRDX5	8p-Del	0.833	1
PRDX5	Del_9p23	0.833	1
PRDX5	Del_13q13.2	0.833	1
PRKAG2	SMARCA4	0.833	1
PRODH	8p-Del	0.833	1
PRODH	Del_9p23	0.833	1
PRODH	Del_13q13.2	0.833	1
PTCH1	SMARCA4	0.833	1
SCYL1	8p-Del	0.833	1
SCYL1	Del_13q13.2	0.833	1
SLC1A7	8p-Del	0.833	1
SLC1A7	Del_9p23	0.833	1
SLC1A7	Del_13q13.2	0.833	1
SPATA13	8p-Del	0.833	1
SPATA13	Del_9p23	0.833	1
SPATA13	Del_13q13.2	0.833	1
ZNF814	Amp_7q31.2	0.833	1
3q-Del	8p-Del	0.833	1
ALMS1	12q-Amp	0.834	1
CUL3	Del_4q34.3	0.834	1
KIAA0922	7q-Amp	0.834	1
PRKAG2	12p-Amp	0.834	1
PTCH1	12p-Amp	0.834	1
PTCH1	7q-Amp	0.834	1
ZNF814	1p-Del	0.834	1
ADCY8	17p-Del	0.835	1
BRAF	16p-Amp	0.835	1
MYF6	Del_3p26.3	0.835	1
NASP	16p-Amp	0.835	1
NOM1	Del_1p31.1	0.835	1
NUDT11	Del_3p26.3	0.835	1
PODXL	Del_1p31.1	0.835	1
RILPL1	16p-Amp	0.835	1
RIMBP3	Del_3p26.3	0.835	1
STXBP3	Del_3p26.3	0.835	1
ZNF521	Del_3p26.3	0.835	1
ARAP3	MTOR	0.836	1
ARAP3	3q-Del	0.836	1
CSK	MTOR	0.836	1
CSK	3q-Del	0.836	1
ENO1	MTOR	0.836	1
ENO1	3q-Del	0.836	1
FZR1	MTOR	0.836	1
FZR1	3q-Del	0.836	1
MTOR	SLC6A14	0.836	1
MTOR	TCEB1	0.836	1
MTOR	ZC3H3	0.836	1
MTOR	Amp_Xq11.2	0.836	1
SLC6A14	3q-Del	0.836	1
TCEB1	3q-Del	0.836	1
ZC3H3	3q-Del	0.836	1
3q-Del	Amp_Xq11.2	0.836	1
BCLAF1	Del_6q26	0.837	1
CACNA1C	TP53	0.837	1
ENO1	Del_3p12.2	0.837	1
FZR1	Del_3p12.2	0.837	1
KIAA0922	7p-Amp	0.837	1
NIPBL	TP53	0.837	1
PTCH1	7p-Amp	0.837	1
STAG2	TP53	0.837	1
SYNE1	3p-Del	0.837	1
Amp_Xq11.2	Del_3p12.2	0.837	1
ADAM28	Amp_3q26.32	0.838	1
ARHGAP33	KDM5C	0.838	1
BRAF	KDM5C	0.838	1
C16orf78	Amp_3q26.32	0.838	1
C9orf171	Amp_3q26.32	0.838	1
CARKD	Amp_3q26.32	0.838	1
DPYSL4	Amp_3q26.32	0.838	1
EDIL3	KDM5C	0.838	1
GPR50	KDM5C	0.838	1
INPP5E	Amp_3q26.32	0.838	1
KDM5C	NASP	0.838	1
KDM5C	RILPL1	0.838	1
KDM5C	RIMBP3	0.838	1
KDM5C	STXBP3	0.838	1
KDM5C	ZNF438	0.838	1
KDM5C	ZNF521	0.838	1
KRAS	14q-Del	0.838	1
OR10G3	Amp_3q26.32	0.838	1
PDLIM4	Amp_3q26.32	0.838	1
PRDX5	Amp_3q26.32	0.838	1
PRODH	Amp_3q26.32	0.838	1
SCYL1	Amp_3q26.32	0.838	1
SLC1A7	Amp_3q26.32	0.838	1
SLC23A1	14q-Del	0.838	1
SPATA13	Amp_3q26.32	0.838	1
ADCY8	AR	0.839	1
ADCY8	CACNA1C	0.839	1
ADCY8	NIPBL	0.839	1
ADCY8	PIK3CA	0.839	1
ADCY8	STAG2	0.839	1
AR	PARD6B	0.839	1
AR	PCK1	0.839	1
AR	SMARCB1	0.839	1
AR	WDR52	0.839	1
AR	ZFYVE26	0.839	1
CACNA1C	GALNT7	0.839	1
CACNA1C	PARD6B	0.839	1
CACNA1C	PCK1	0.839	1
CACNA1C	SMARCB1	0.839	1
CACNA1C	WDR52	0.839	1
CACNA1C	ZFYVE26	0.839	1
GALNT7	PIK3CA	0.839	1
GALNT7	STAG2	0.839	1
NIPBL	PARD6B	0.839	1
NIPBL	PCK1	0.839	1
NIPBL	WDR52	0.839	1
NIPBL	ZFYVE26	0.839	1
PARD6B	STAG2	0.839	1
PCK1	PIK3CA	0.839	1
PCK1	STAG2	0.839	1
PIK3CA	SMARCB1	0.839	1
PIK3CA	WDR52	0.839	1
PIK3CA	ZFYVE26	0.839	1
SMARCB1	STAG2	0.839	1
STAG2	WDR52	0.839	1
STAG2	ZFYVE26	0.839	1
ADCY8	5q-Amp	0.84	1
BRAF	17p-Amp	0.84	1
GPR50	17p-Amp	0.84	1
MYF6	17p-Amp	0.84	1
NASP	17p-Amp	0.84	1
NUDT11	17p-Amp	0.84	1
PCF11	3p-Amp	0.84	1
RILPL1	17p-Amp	0.84	1
SMARCB1	17q-Amp	0.84	1
SMARCB1	5q-Amp	0.84	1
TXNIP	Del_2q37.3	0.84	1
WASL	Del_2q37.3	0.84	1
CDKN2A	VHL	0.841	1
ECHDC2	VHL	0.841	1
F2RL1	17q-Amp	0.841	1
FAT1	17p-Amp	0.841	1
IFNB1	17q-Amp	0.841	1
KCNK1	17q-Amp	0.841	1
KLK10	VHL	0.841	1
NDUFA3	17q-Amp	0.841	1
ONECUT2	17q-Amp	0.841	1
RALB	17q-Amp	0.841	1
RCN1	17q-Amp	0.841	1
RIN1	17q-Amp	0.841	1
RNF113B	17q-Amp	0.841	1
RNF144A	17q-Amp	0.841	1
SLC23A1	Del_3p14.1	0.841	1
TMEM47	17q-Amp	0.841	1
VHL	ZNF532	0.841	1
ZNHIT1	17q-Amp	0.841	1
ACSF2	NFE2L2	0.842	1
ACSF2	PCF11	0.842	1
ADAM28	17p-Del	0.842	1
C16orf78	17p-Del	0.842	1
C9orf171	17p-Del	0.842	1
CARKD	17p-Del	0.842	1
CDCA8	17p-Del	0.842	1
DNMT3A	NEFH	0.842	1
DNMT3A	NFE2L2	0.842	1
DNMT3A	PCF11	0.842	1
DPYSL4	17p-Del	0.842	1
EPS15L1	3q-Amp	0.842	1
INPP5E	17p-Del	0.842	1
NEFH	RAI1	0.842	1
NEK8	17p-Del	0.842	1
NFE2L2	RAI1	0.842	1
OR10G3	17p-Del	0.842	1
PDLIM4	17p-Del	0.842	1
PRDX5	17p-Del	0.842	1
PRODH	17p-Del	0.842	1
SCYL1	17p-Del	0.842	1
SLC1A7	17p-Del	0.842	1
SMARCA4	Del_3p12.2	0.842	1
SPATA13	17p-Del	0.842	1
SYNE1	Del_2q37.3	0.842	1
CACNA1C	Del_6q26	0.843	1
CUL3	8p-Del	0.843	1
NF2	Del_9p23	0.843	1
NOM1	Amp_5q35.1	0.843	1
8p-Del	Del_16q23.3	0.843	1
ADCY8	5p-Amp	0.844	1
ARAP3	PBRM1	0.844	1
ARHGAP33	Amp_2q32.1	0.844	1
ATM	Del_2q22.1	0.844	1
BCLAF1	KDM6A	0.844	1
BCLAF1	NF1	0.844	1
BRAF	PTEN	0.844	1
BRAF	Amp_2q32.1	0.844	1
CSF1R	1p-Del	0.844	1
EDIL3	PTEN	0.844	1
EDIL3	Amp_2q32.1	0.844	1
EPS15L1	KDM6A	0.844	1
GPR50	PTEN	0.844	1
KIAA0922	1p-Del	0.844	1
MYF6	PTEN	0.844	1
MYF6	Amp_2q32.1	0.844	1
NASP	Amp_2q32.1	0.844	1
NUDT11	PTEN	0.844	1
NUDT11	Amp_2q32.1	0.844	1
PBRM1	SLC6A14	0.844	1
PBRM1	Amp_Xq11.2	0.844	1
PRKAG2	12q-Amp	0.844	1
PTCH1	12q-Amp	0.844	1
PTEN	RILPL1	0.844	1
PTEN	RIMBP3	0.844	1
PTEN	STXBP3	0.844	1
PTEN	ZNF438	0.844	1
PTEN	ZNF521	0.844	1
RILPL1	Amp_2q32.1	0.844	1
RIMBP3	Amp_2q32.1	0.844	1
SMARCB1	5p-Amp	0.844	1
SMARCB1	9q-Del	0.844	1
WDR52	9q-Del	0.844	1
ZFYVE26	9q-Del	0.844	1
ZNF438	Amp_2q32.1	0.844	1
ZNF521	Amp_2q32.1	0.844	1
ADAM28	5q-Amp	0.845	1
ARAP3	SYNE1	0.845	1
ATM	12p-Amp	0.845	1
C16orf78	5q-Amp	0.845	1
C9orf171	5q-Amp	0.845	1
CARKD	5q-Amp	0.845	1
CDCA8	5q-Amp	0.845	1
CSK	SYNE1	0.845	1
DPYSL4	5q-Amp	0.845	1
FAT1	12p-Amp	0.845	1
MTOR	Del_14q31.1	0.845	1
OR10G3	5q-Amp	0.845	1
PRDX5	5q-Amp	0.845	1
SCYL1	5q-Amp	0.845	1
SPATA13	5q-Amp	0.845	1
SYNE1	TCEB1	0.845	1
SYNE1	ZC3H3	0.845	1
SYNE1	Amp_Xq11.2	0.845	1
16p-Amp	18q-Del	0.845	1
CDK12	CUL3	0.846	1
CDK12	Amp_17q24.3	0.846	1
CDK12	Del_16q23.3	0.846	1
CUL3	FAM178A	0.846	1
CUL3	GLS	0.846	1
CUL3	TXNIP	0.846	1
CUL3	WASL	0.846	1
FAM178A	Del_16q23.3	0.846	1
GLS	NF2	0.846	1
GLS	Amp_17q24.3	0.846	1
GLS	Del_16q23.3	0.846	1
KDM5C	SETD2	0.846	1
NF2	TXNIP	0.846	1
NF2	WASL	0.846	1
NF2	Del_14q31.1	0.846	1
TXNIP	Del_16q23.3	0.846	1
WASL	Amp_17q24.3	0.846	1
Del_14q31.1	Del_16q23.3	0.846	1
ADAM28	5p-Amp	0.847	1
ADAM28	9q-Del	0.847	1
ADCY8	Del_3p14.1	0.847	1
ALMS1	20p-Amp	0.847	1
BCLAF1	16q-Amp	0.847	1
C16orf78	5p-Amp	0.847	1
C16orf78	9q-Del	0.847	1
C9orf171	5p-Amp	0.847	1
C9orf171	9q-Del	0.847	1
CDCA8	5p-Amp	0.847	1
CDCA8	9q-Del	0.847	1
CDK12	Del_1q44	0.847	1
CSF1R	6p-Del	0.847	1
DPYSL4	5p-Amp	0.847	1
GLS	Del_1q44	0.847	1
IMPA2	9q-Del	0.847	1
INPP5E	9q-Del	0.847	1
KDM6A	12p-Amp	0.847	1
MYF6	Del_6q26	0.847	1
NASP	Del_6q26	0.847	1
NEK8	9q-Del	0.847	1
OR10G3	5p-Amp	0.847	1
OR10G3	9q-Del	0.847	1
PDLIM4	9q-Del	0.847	1
PRDX5	5p-Amp	0.847	1
PRDX5	9q-Del	0.847	1
PRODH	9q-Del	0.847	1
RILPL1	Del_6q26	0.847	1
RIMBP3	Del_6q26	0.847	1
SCYL1	5p-Amp	0.847	1
SCYL1	9q-Del	0.847	1
SLC1A7	9q-Del	0.847	1
SPATA13	5p-Amp	0.847	1
SPATA13	9q-Del	0.847	1
STXBP3	Del_6q26	0.847	1
ZNF521	Del_6q26	0.847	1
GALNT7	9p-Del	0.848	1
PARD6B	SETD2	0.848	1
SETD2	ZFYVE26	0.848	1
SMARCB1	9p-Del	0.848	1
WDR52	9p-Del	0.848	1
ZFYVE26	9p-Del	0.848	1
ZNF814	7q-Amp	0.848	1
ADAM28	SETD2	0.849	1
ADAM28	9p-Del	0.849	1
ADCY8	ALMS1	0.849	1
ALMS1	GALNT7	0.849	1
ALMS1	PCK1	0.849	1
ALMS1	SMARCB1	0.849	1
ALMS1	WDR52	0.849	1
ALMS1	ZFYVE26	0.849	1
ARHGAP35	ARID1A	0.849	1
ARID1A	KIAA0922	0.849	1
ARID1A	PRKAG2	0.849	1
ARID1A	PTCH1	0.849	1
C16orf78	SETD2	0.849	1
C9orf171	SETD2	0.849	1
C9orf171	9p-Del	0.849	1
CARKD	SETD2	0.849	1
CDCA8	SETD2	0.849	1
CDCA8	9p-Del	0.849	1
CUL3	MTOR	0.849	1
DPYSL4	SETD2	0.849	1
IMPA2	9p-Del	0.849	1
INPP5E	SETD2	0.849	1
INPP5E	9p-Del	0.849	1
MTOR	NF2	0.849	1
NEK8	SETD2	0.849	1
NEK8	9p-Del	0.849	1
OR10G3	SETD2	0.849	1
OR10G3	9p-Del	0.849	1
PARD6B	ZNF814	0.849	1
PCK1	ZNF814	0.849	1
PDLIM4	SETD2	0.849	1
PDLIM4	9p-Del	0.849	1
PRDX5	SETD2	0.849	1
PRDX5	9p-Del	0.849	1
PRODH	SETD2	0.849	1
PRODH	9p-Del	0.849	1
SCYL1	SETD2	0.849	1
SETD2	SLC1A7	0.849	1
SETD2	SPATA13	0.849	1
SLC1A7	9p-Del	0.849	1
SMARCB1	ZNF814	0.849	1
SPATA13	9p-Del	0.849	1
WDR52	ZNF814	0.849	1
ZFYVE26	ZNF814	0.849	1
12p-Amp	18p-Del	0.849	1
5q-Amp	Amp_2q32.1	0.849	1
BCLAF1	Del_1p36.31	0.85	1
F2RL1	16p-Amp	0.85	1
IFNB1	16p-Amp	0.85	1
KCNK1	16p-Amp	0.85	1
NDUFA3	16p-Amp	0.85	1
ONECUT2	16p-Amp	0.85	1
PIK3CA	Del_4q34.3	0.85	1
RALB	16p-Amp	0.85	1
RCN1	16p-Amp	0.85	1
RIN1	16p-Amp	0.85	1
RNF113B	16p-Amp	0.85	1
RNF144A	16p-Amp	0.85	1
TMEM47	16p-Amp	0.85	1
ZNHIT1	16p-Amp	0.85	1
5p-Amp	Del_4q34.3	0.85	1
ARHGAP35	Del_8p23.2	0.851	1
CACNA1C	Del_2q37.3	0.851	1
CDK12	Del_13q13.2	0.851	1
CSF1R	Del_8p23.2	0.851	1
CSF1R	Del_10q23.31	0.851	1
FAM178A	Del_13q13.2	0.851	1
GLS	8p-Del	0.851	1
GLS	Del_9p23	0.851	1
GLS	Del_13q13.2	0.851	1
PTCH1	Del_8p23.2	0.851	1
PTCH1	Del_10q23.31	0.851	1
SMARCA4	18q-Del	0.851	1
STAG2	Del_2q37.3	0.851	1
TXNIP	8p-Del	0.851	1
TXNIP	Del_9p23	0.851	1
TXNIP	Del_13q13.2	0.851	1
VCL	Del_3p14.1	0.851	1
WASL	Del_9p23	0.851	1
WASL	Del_13q13.2	0.851	1
ZNF532	Del_3p14.1	0.851	1
ZNF814	7p-Amp	0.851	1
ADAM28	21q-Del	0.852	1
ADCY8	21q-Del	0.852	1
ALMS1	20q-Amp	0.852	1
C16orf78	21q-Del	0.852	1
C9orf171	21q-Del	0.852	1
CARKD	21q-Del	0.852	1
CDCA8	21q-Del	0.852	1
DPYSL4	21q-Del	0.852	1
F2RL1	17p-Amp	0.852	1
GALNT7	21q-Del	0.852	1
IFNB1	17p-Amp	0.852	1
IMPA2	21q-Del	0.852	1
INPP5E	21q-Del	0.852	1
KCNK1	17p-Amp	0.852	1
NDUFA3	17p-Amp	0.852	1
ONECUT2	17p-Amp	0.852	1
OR10G3	21q-Del	0.852	1
PDLIM4	21q-Del	0.852	1
PRDX5	21q-Del	0.852	1
PRKAG2	Del_3p21.2	0.852	1
RALB	17p-Amp	0.852	1
RCN1	17p-Amp	0.852	1
RIN1	17p-Amp	0.852	1
RNF113B	17p-Amp	0.852	1
RNF144A	17p-Amp	0.852	1
SCYL1	21q-Del	0.852	1
SMARCB1	21q-Del	0.852	1
SPATA13	21q-Del	0.852	1
TMEM47	17p-Amp	0.852	1
WDR52	21q-Del	0.852	1
ZNHIT1	17p-Amp	0.852	1
ACSF2	Del_1p31.1	0.853	1
ATM	Del_3p21.2	0.853	1
CUL3	Amp_3q26.32	0.853	1
NEFH	Amp_17q24.3	0.853	1
NF2	Amp_3q26.32	0.853	1
NFE2L2	Amp_17q24.3	0.853	1
3q-Amp	5p-Amp	0.853	1
ACSF2	DNMT3A	0.854	1
ACSF2	RAI1	0.854	1
ARAP3	Amp_17q24.3	0.854	1
BRAF	16q-Amp	0.854	1
DNMT3A	RAI1	0.854	1
FZR1	Amp_17q24.3	0.854	1
KIAA0922	20p-Amp	0.854	1
NASP	16q-Amp	0.854	1
PTCH1	20p-Amp	0.854	1
RILPL1	16q-Amp	0.854	1
SLC6A14	Amp_17q24.3	0.854	1
TP53	ZNF814	0.854	1
ZC3H3	Amp_17q24.3	0.854	1
ZNF521	16q-Amp	0.854	1
Amp_17q24.3	Amp_Xq11.2	0.854	1
ALMS1	16p-Amp	0.855	1
AR	CDK12	0.855	1
AR	FAM178A	0.855	1
AR	GLS	0.855	1
AR	TXNIP	0.855	1
AR	WASL	0.855	1
ARHGAP33	MET	0.855	1
ARHGAP33	2q-Amp	0.855	1
ATM	FGFR3	0.855	1
ATM	KRAS	0.855	1
ATM	NOM1	0.855	1
ATM	PODXL	0.855	1
ATM	SLC23A1	0.855	1
BCLAF1	NEFH	0.855	1
BCLAF1	NFE2L2	0.855	1
BRAF	MET	0.855	1
BRAF	2q-Amp	0.855	1
CACNA1C	FAM178A	0.855	1
CACNA1C	GLS	0.855	1
CACNA1C	WASL	0.855	1
CDK12	NIPBL	0.855	1
CDK12	PIK3CA	0.855	1
CDK12	STAG2	0.855	1
EDIL3	MET	0.855	1
EDIL3	2q-Amp	0.855	1
EPS15L1	NEFH	0.855	1
EPS15L1	PCF11	0.855	1
FAM178A	NIPBL	0.855	1
FAM178A	PIK3CA	0.855	1
FAM178A	STAG2	0.855	1
FAT1	FGFR3	0.855	1
FAT1	KRAS	0.855	1
FAT1	NOM1	0.855	1
FAT1	NTRK3	0.855	1
FAT1	PODXL	0.855	1
FAT1	SLC23A1	0.855	1
FGFR3	SMARCA4	0.855	1
FGFR3	6q-Del	0.855	1
GLS	PIK3CA	0.855	1
GLS	STAG2	0.855	1
GPR50	MET	0.855	1
KRAS	SMARCA4	0.855	1
MET	MYF6	0.855	1
MET	NASP	0.855	1
MET	NUDT11	0.855	1
MET	RILPL1	0.855	1
MET	RIMBP3	0.855	1
MET	STXBP3	0.855	1
MET	ZNF438	0.855	1
MET	ZNF521	0.855	1
MYF6	2q-Amp	0.855	1
NASP	2q-Amp	0.855	1
NEFH	Del_3p21.2	0.855	1
NIPBL	TXNIP	0.855	1
NOM1	SMARCA4	0.855	1
NTRK3	SMARCA4	0.855	1
NTRK3	6q-Del	0.855	1
NUDT11	2q-Amp	0.855	1
PIK3CA	TXNIP	0.855	1
PIK3CA	WASL	0.855	1
PODXL	SMARCA4	0.855	1
RILPL1	2q-Amp	0.855	1
RIMBP3	2q-Amp	0.855	1
SLC23A1	6q-Del	0.855	1
SYNE1	Del_1q44	0.855	1
ZNF438	2q-Amp	0.855	1
ZNF521	2q-Amp	0.855	1
16q-Amp	Amp_5q35.1	0.855	1
5p-Amp	Amp_2q32.1	0.855	1
ALMS1	Del_9p21.3	0.856	1
ARHGAP33	Del_1p36.31	0.856	1
BRAF	Del_1p36.31	0.856	1
CYP2C18	Del_6q26	0.856	1
F2RL1	Del_6q26	0.856	1
GPR50	Del_1p36.31	0.856	1
IFNB1	Del_6q26	0.856	1
MYF6	Del_1p36.31	0.856	1
NASP	Del_1p36.31	0.856	1
NDUFA3	Del_6q26	0.856	1
NEFH	Del_3p14.1	0.856	1
NKX2-1	Del_6q26	0.856	1
ONECUT2	Del_6q26	0.856	1
RALB	Del_6q26	0.856	1
RCN1	Del_6q26	0.856	1
RILPL1	Del_1p36.31	0.856	1
RIMBP3	Del_1p36.31	0.856	1
RIN1	Del_6q26	0.856	1
RNF113B	Del_6q26	0.856	1
RNF144A	Del_6q26	0.856	1
SETD2	Del_10q23.31	0.856	1
SLC14A1	Del_6q26	0.856	1
TMEM47	Del_6q26	0.856	1
ZNF521	Del_1p36.31	0.856	1
ZNHIT1	Del_6q26	0.856	1
KIAA0922	20q-Amp	0.857	1
PTCH1	20q-Amp	0.857	1
ARID1A	Del_3p26.3	0.858	1
ARID1A	Del_11q23.1	0.858	1
ATM	3p-Del	0.858	1
CACNA1C	Del_1p36.31	0.858	1
GLS	Amp_3q26.32	0.858	1
TXNIP	Amp_3q26.32	0.858	1
WASL	Amp_3q26.32	0.858	1
ADCY8	KDM6A	0.859	1
ADCY8	NF1	0.859	1
ARAP3	Del_11q23.1	0.859	1
CSK	Del_11q23.1	0.859	1
FAT1	PTEN	0.859	1
FAT1	Amp_2q32.1	0.859	1
FZR1	Del_11q23.1	0.859	1
GALNT7	KDM6A	0.859	1
KDM6A	SMARCB1	0.859	1
KDM6A	WDR52	0.859	1
KDM6A	ZFYVE26	0.859	1
KDM6A	12q-Amp	0.859	1
NF1	PCK1	0.859	1
NF1	WDR52	0.859	1
NF1	ZFYVE26	0.859	1
NF1	1p-Del	0.859	1
PTEN	SMARCA4	0.859	1
SLC6A14	Del_11q23.1	0.859	1
SMARCA4	Amp_2q32.1	0.859	1
TCEB1	Del_11q23.1	0.859	1
ZC3H3	Del_11q23.1	0.859	1
Amp_Xq11.2	Del_11q23.1	0.859	1
CACNA1C	Del_1q44	0.86	1
CSF1R	Del_9p21.3	0.86	1
EGFR	Del_9p21.3	0.86	1
F2RL1	16q-Amp	0.86	1
FAT1	12q-Amp	0.86	1
GALNT7	16p-Amp	0.86	1
IFNB1	16q-Amp	0.86	1
KCNK1	16q-Amp	0.86	1
NDUFA3	16q-Amp	0.86	1
ONECUT2	16q-Amp	0.86	1
PARD6B	16p-Amp	0.86	1
PCK1	16p-Amp	0.86	1
PTCH1	Del_9p21.3	0.86	1
RALB	16q-Amp	0.86	1
RCN1	16q-Amp	0.86	1
RIN1	16q-Amp	0.86	1
RNF113B	16q-Amp	0.86	1
RNF144A	16q-Amp	0.86	1
SMARCB1	16p-Amp	0.86	1
TMEM47	16q-Amp	0.86	1
ZNHIT1	16q-Amp	0.86	1
ADAM28	3q-Amp	0.861	1
ADAM28	13q-Del	0.861	1
C16orf78	3q-Amp	0.861	1
C16orf78	13q-Del	0.861	1
C9orf171	3q-Amp	0.861	1
C9orf171	13q-Del	0.861	1
CARKD	3q-Amp	0.861	1
CARKD	13q-Del	0.861	1
CDCA8	3q-Amp	0.861	1
CDCA8	13q-Del	0.861	1
CDKN2A	TP53	0.861	1
CXorf23	TP53	0.861	1
CYP2C18	Del_1p36.31	0.861	1
DNAJA3	TP53	0.861	1
DPYSL4	3q-Amp	0.861	1
DPYSL4	13q-Del	0.861	1
ECHDC2	TP53	0.861	1
F2RL1	Del_1p36.31	0.861	1
HSPA2	TP53	0.861	1
IFNB1	Del_1p36.31	0.861	1
INPP5E	3q-Amp	0.861	1
INPP5E	13q-Del	0.861	1
KCNK1	Del_1p36.31	0.861	1
KIF16B	TP53	0.861	1
KLK10	TP53	0.861	1
NEK8	13q-Del	0.861	1
NKX2-1	Del_1p36.31	0.861	1
ONECUT2	Del_1p36.31	0.861	1
OR10G3	3q-Amp	0.861	1
OR10G3	13q-Del	0.861	1
PAM	TP53	0.861	1
PDLIM4	3q-Amp	0.861	1
PDLIM4	13q-Del	0.861	1
PRDX5	3q-Amp	0.861	1
PRDX5	13q-Del	0.861	1
PRODH	13q-Del	0.861	1
RALB	Del_1p36.31	0.861	1
RIN1	Del_1p36.31	0.861	1
RNF113B	Del_1p36.31	0.861	1
RNF144A	Del_1p36.31	0.861	1
SCYL1	3q-Amp	0.861	1
SCYL1	13q-Del	0.861	1
SLC14A1	Del_1p36.31	0.861	1
SLC1A7	13q-Del	0.861	1
SPATA13	3q-Amp	0.861	1
SPATA13	13q-Del	0.861	1
TMEM47	Del_1p36.31	0.861	1
TP53	VCL	0.861	1
TP53	ZNF532	0.861	1
ZNHIT1	Del_1p36.31	0.861	1
9p-Del	Amp_2q32.1	0.861	1
ALMS1	17p-Amp	0.862	1
DNMT3A	3p-Amp	0.862	1
KDM6A	17q-Amp	0.862	1
MET	Amp_3q26.32	0.862	1
ZNF814	17p-Amp	0.862	1
ACSF2	Amp_5q35.1	0.863	1
CSF1R	10q-Del	0.863	1
CUL3	SYNE1	0.863	1
NF1	6p-Del	0.863	1
PTCH1	10q-Del	0.863	1
Amp_5q35.1	Amp_7q31.2	0.863	1
ALMS1	CDK12	0.864	1
ALMS1	FAM178A	0.864	1
ALMS1	GLS	0.864	1
ALMS1	WASL	0.864	1
ARHGAP35	CUL3	0.864	1
ARHGAP35	NF2	0.864	1
ARHGAP35	Del_16q23.3	0.864	1
CACNA1C	Del_13q13.2	0.864	1
CDK12	ZNF814	0.864	1
CSF1R	NF2	0.864	1
CUL3	EGFR	0.864	1
CUL3	KIAA0922	0.864	1
CUL3	PRKAG2	0.864	1
CUL3	PTCH1	0.864	1
EGFR	NF2	0.864	1
EGFR	Del_16q23.3	0.864	1
FAM178A	ZNF814	0.864	1
GLS	ZNF814	0.864	1
KIAA0922	NF2	0.864	1
KIAA0922	Del_16q23.3	0.864	1
MTOR	STAG2	0.864	1
NF2	PRKAG2	0.864	1
NF2	Amp_17q24.3	0.864	1
NIPBL	Del_13q13.2	0.864	1
PIK3CA	3q-Del	0.864	1
PRKAG2	Del_16q23.3	0.864	1
PTCH1	Del_16q23.3	0.864	1
STAG2	Del_13q13.2	0.864	1
WASL	ZNF814	0.864	1
ATM	6p-Del	0.865	1
BRAF	Del_14q31.1	0.865	1
CDK12	17p-Del	0.865	1
FAT1	6p-Del	0.865	1
GLS	17p-Del	0.865	1
MYF6	Del_14q31.1	0.865	1
SMARCB1	17p-Amp	0.865	1
TXNIP	17p-Del	0.865	1
ZNF438	Del_14q31.1	0.865	1
ZNF521	Del_14q31.1	0.865	1
ADAM28	Del_2q22.1	0.866	1
C16orf78	Del_2q22.1	0.866	1
C9orf171	Del_2q22.1	0.866	1
CACNA1C	Del_3p12.2	0.866	1
CARKD	Del_2q22.1	0.866	1
CDCA8	Del_2q22.1	0.866	1
CYP2C18	Del_14q31.1	0.866	1
DPYSL4	Del_2q22.1	0.866	1
F2RL1	Del_14q31.1	0.866	1
INPP5E	Del_2q22.1	0.866	1
KCNK1	Del_14q31.1	0.866	1
NDUFA3	Del_14q31.1	0.866	1
NEK8	Del_2q22.1	0.866	1
NKX2-1	Del_14q31.1	0.866	1
ONECUT2	Del_14q31.1	0.866	1
OR10G3	Del_2q22.1	0.866	1
PDLIM4	Del_2q22.1	0.866	1
PRDX5	Del_2q22.1	0.866	1
RALB	Del_14q31.1	0.866	1
RCN1	Del_14q31.1	0.866	1
RIN1	Del_14q31.1	0.866	1
RNF113B	Del_14q31.1	0.866	1
SCYL1	Del_2q22.1	0.866	1
SLC14A1	Del_14q31.1	0.866	1
SPATA13	Del_2q22.1	0.866	1
TMEM47	Del_14q31.1	0.866	1
ZNHIT1	Del_14q31.1	0.866	1
ACSF2	BCLAF1	0.867	1
ACSF2	EPS15L1	0.867	1
ARID1A	3q-Amp	0.867	1
BCLAF1	DNMT3A	0.867	1
BCLAF1	RAI1	0.867	1
CACNA1C	Del_3p14.1	0.867	1
DNMT3A	EPS15L1	0.867	1
EPS15L1	RAI1	0.867	1
SYNE1	Amp_7q31.2	0.867	1
ADAM28	18q-Del	0.868	1
ADCY8	13q-Del	0.868	1
ARAP3	KDM5C	0.868	1
C9orf171	18q-Del	0.868	1
CACNA1C	Del_3p26.3	0.868	1
CARKD	18q-Del	0.868	1
CDCA8	18q-Del	0.868	1
CSK	KDM5C	0.868	1
CUL3	5q-Amp	0.868	1
CXorf23	Del_4q34.3	0.868	1
DNAJA3	Del_4q34.3	0.868	1
ECHDC2	Del_4q34.3	0.868	1
FZR1	KDM5C	0.868	1
GALNT7	3q-Amp	0.868	1
HSPA2	Del_4q34.3	0.868	1
IMPA2	18q-Del	0.868	1
INPP5E	18q-Del	0.868	1
KDM5C	SLC6A14	0.868	1
KDM5C	TCEB1	0.868	1
KDM5C	ZC3H3	0.868	1
KDM5C	Amp_Xq11.2	0.868	1
KIF16B	Del_4q34.3	0.868	1
KLK10	Del_4q34.3	0.868	1
NEK8	18q-Del	0.868	1
NF2	5q-Amp	0.868	1
OR10G3	18q-Del	0.868	1
PAM	Del_4q34.3	0.868	1
PCK1	3q-Amp	0.868	1
PDLIM4	18q-Del	0.868	1
PRDX5	18q-Del	0.868	1
PRODH	18q-Del	0.868	1
SLC1A7	18q-Del	0.868	1
SLC23A1	3p-Del	0.868	1
SYNE1	Del_3p26.3	0.868	1
VCL	Del_4q34.3	0.868	1
WDR52	13q-Del	0.868	1
ZFYVE26	3q-Amp	0.868	1
ZNF532	Del_4q34.3	0.868	1
ADCY8	NEFH	0.869	1
ADCY8	NFE2L2	0.869	1
ADCY8	PCF11	0.869	1
ARID1A	FGFR3	0.869	1
ARID1A	KRAS	0.869	1
ARID1A	NOM1	0.869	1
ARID1A	NTRK3	0.869	1
ARID1A	PODXL	0.869	1
ARID1A	SLC23A1	0.869	1
ATM	Del_10q23.31	0.869	1
EPS15L1	18p-Del	0.869	1
FAM178A	5q-Amp	0.869	1
GALNT7	NEFH	0.869	1
GALNT7	NFE2L2	0.869	1
GLS	5q-Amp	0.869	1
NEFH	PARD6B	0.869	1
NEFH	PCK1	0.869	1
NEFH	SMARCB1	0.869	1
NEFH	WDR52	0.869	1
NFE2L2	PCK1	0.869	1
NFE2L2	WDR52	0.869	1
NFE2L2	ZFYVE26	0.869	1
PARD6B	PCF11	0.869	1
PCF11	PCK1	0.869	1
PCF11	WDR52	0.869	1
PCF11	ZFYVE26	0.869	1
SMARCA4	18p-Del	0.869	1
WASL	5q-Amp	0.869	1
Amp_5q35.1	Del_4q34.3	0.869	1
KLK10	3p-Del	0.87	1
ZNF532	3p-Del	0.87	1
5p-Amp	Del_9p21.3	0.87	1
KDM6A	Amp_7q31.2	0.871	1
NF1	20p-Amp	0.871	1
AR	ARHGAP35	0.872	1
AR	CSF1R	0.872	1
AR	EGFR	0.872	1
AR	PTCH1	0.872	1
AR	Del_14q31.1	0.872	1
ARHGAP35	CACNA1C	0.872	1
ARHGAP35	PIK3CA	0.872	1
CACNA1C	EGFR	0.872	1
CACNA1C	KIAA0922	0.872	1
CACNA1C	PRKAG2	0.872	1
CACNA1C	PTCH1	0.872	1
CDK12	5p-Amp	0.872	1
CSF1R	NIPBL	0.872	1
CSF1R	STAG2	0.872	1
CUL3	5p-Amp	0.872	1
EGFR	NIPBL	0.872	1
EGFR	STAG2	0.872	1
FAM178A	5p-Amp	0.872	1
GLS	5p-Amp	0.872	1
GLS	9q-Del	0.872	1
KIAA0922	NIPBL	0.872	1
KIAA0922	PIK3CA	0.872	1
KIAA0922	STAG2	0.872	1
NF2	5p-Amp	0.872	1
NF2	9q-Del	0.872	1
NIPBL	PRKAG2	0.872	1
NIPBL	PTCH1	0.872	1
PIK3CA	PRKAG2	0.872	1
PIK3CA	PTCH1	0.872	1
PIK3CA	Del_14q31.1	0.872	1
PRKAG2	STAG2	0.872	1
PTCH1	STAG2	0.872	1
TXNIP	9q-Del	0.872	1
WASL	5p-Amp	0.872	1
ADCY8	Del_6q26	0.873	1
ARAP3	PTEN	0.873	1
ARHGAP35	Del_2q37.3	0.873	1
CSF1R	Del_2q37.3	0.873	1
CSK	PTEN	0.873	1
CSK	Amp_2q32.1	0.873	1
ENO1	PTEN	0.873	1
ENO1	Amp_2q32.1	0.873	1
FZR1	PTEN	0.873	1
FZR1	Amp_2q32.1	0.873	1
NEFH	12p-Amp	0.873	1
PCF11	12p-Amp	0.873	1
PRKAG2	Del_3p26.3	0.873	1
PTEN	SLC6A14	0.873	1
PTEN	TCEB1	0.873	1
PTEN	ZC3H3	0.873	1
PTEN	Amp_Xq11.2	0.873	1
SLC6A14	Amp_2q32.1	0.873	1
SMARCB1	Del_6q26	0.873	1
TCEB1	Amp_2q32.1	0.873	1
ZC3H3	Amp_2q32.1	0.873	1
CDK12	KDM6A	0.874	1
FAM178A	KDM6A	0.874	1
GLS	KDM6A	0.874	1
GLS	NF1	0.874	1
KDM6A	WASL	0.874	1
NF1	TXNIP	0.874	1
20p-Amp	21q-Del	0.874	1
CDKN2A	MTOR	0.875	1
CDKN2A	3q-Del	0.875	1
CXorf23	MTOR	0.875	1
CXorf23	3q-Del	0.875	1
CYP2C18	Del_1p31.1	0.875	1
DNAJA3	MTOR	0.875	1
DNAJA3	3q-Del	0.875	1
ECHDC2	MTOR	0.875	1
F2RL1	Del_1p31.1	0.875	1
HSPA2	MTOR	0.875	1
HSPA2	3q-Del	0.875	1
IFNB1	Del_1p31.1	0.875	1
KCNK1	Del_1p31.1	0.875	1
KIF16B	MTOR	0.875	1
KLK10	MTOR	0.875	1
KLK10	3q-Del	0.875	1
MTOR	PAM	0.875	1
MTOR	VCL	0.875	1
MTOR	ZNF532	0.875	1
NDUFA3	Del_1p31.1	0.875	1
NF1	20q-Amp	0.875	1
NKX2-1	Del_1p31.1	0.875	1
ONECUT2	Del_1p31.1	0.875	1
PAM	3q-Del	0.875	1
RALB	Del_1p31.1	0.875	1
RIN1	Del_1p31.1	0.875	1
RNF113B	Del_1p31.1	0.875	1
RNF144A	Del_1p31.1	0.875	1
SLC14A1	Del_1p31.1	0.875	1
TMEM47	Del_1p31.1	0.875	1
VCL	3q-Del	0.875	1
ZNF532	3q-Del	0.875	1
ZNHIT1	Del_1p31.1	0.875	1
ADAM28	18p-Del	0.876	1
ADCY8	Del_2q22.1	0.876	1
C9orf171	18p-Del	0.876	1
CARKD	18p-Del	0.876	1
CDCA8	18p-Del	0.876	1
CDK12	SETD2	0.876	1
GALNT7	Del_2q22.1	0.876	1
GLS	9p-Del	0.876	1
IMPA2	18p-Del	0.876	1
INPP5E	18p-Del	0.876	1
NEK8	18p-Del	0.876	1
OR10G3	18p-Del	0.876	1
PDLIM4	18p-Del	0.876	1
PRDX5	18p-Del	0.876	1
PRODH	18p-Del	0.876	1
RAI1	6q-Del	0.876	1
SETD2	TXNIP	0.876	1
SLC1A7	18p-Del	0.876	1
SMARCB1	Del_2q22.1	0.876	1
TXNIP	9p-Del	0.876	1
WDR52	Del_2q22.1	0.876	1
Del_1p31.1	Del_3p12.2	0.876	1
ARID1A	Del_2q22.1	0.877	1
ARID1A	Del_3p14.1	0.877	1
ATM	MET	0.877	1
CYP2C18	14q-Del	0.877	1
F2RL1	14q-Del	0.877	1
FAT1	2q-Amp	0.877	1
KCNK1	14q-Del	0.877	1
MET	SMARCA4	0.877	1
NDUFA3	14q-Del	0.877	1
NF2	9p-Del	0.877	1
NKX2-1	14q-Del	0.877	1
ONECUT2	14q-Del	0.877	1
PIK3CA	SYNE1	0.877	1
RALB	14q-Del	0.877	1
RCN1	14q-Del	0.877	1
RIN1	14q-Del	0.877	1
RNF113B	14q-Del	0.877	1
SLC14A1	14q-Del	0.877	1
SMARCA4	2q-Amp	0.877	1
TMEM47	14q-Del	0.877	1
ZNHIT1	14q-Del	0.877	1
14q-Del	Del_16q23.3	0.877	1
ARHGAP33	FAT1	0.878	1
ARHGAP33	SMARCA4	0.878	1
ATM	EDIL3	0.878	1
ATM	GPR50	0.878	1
ATM	MYF6	0.878	1
ATM	NASP	0.878	1
ATM	NUDT11	0.878	1
ATM	RILPL1	0.878	1
ATM	STXBP3	0.878	1
ATM	ZNF438	0.878	1
ATM	ZNF521	0.878	1
BCLAF1	EPS15L1	0.878	1
BRAF	FAT1	0.878	1
BRAF	SMARCA4	0.878	1
CACNA1C	PBRM1	0.878	1
EDIL3	FAT1	0.878	1
EDIL3	SMARCA4	0.878	1
FAT1	MYF6	0.878	1
FAT1	NASP	0.878	1
FAT1	NUDT11	0.878	1
FAT1	RILPL1	0.878	1
FAT1	RIMBP3	0.878	1
FAT1	ZNF438	0.878	1
FAT1	ZNF521	0.878	1
MYF6	SMARCA4	0.878	1
NASP	SMARCA4	0.878	1
NUDT11	SMARCA4	0.878	1
PBRM1	PIK3CA	0.878	1
PBRM1	STAG2	0.878	1
RILPL1	SMARCA4	0.878	1
SMARCA4	STXBP3	0.878	1
SMARCA4	ZNF521	0.878	1
ACSF2	ADCY8	0.879	1
ACSF2	GALNT7	0.879	1
ACSF2	PARD6B	0.879	1
ACSF2	SMARCB1	0.879	1
ACSF2	WDR52	0.879	1
ADCY8	DNMT3A	0.879	1
ADCY8	RAI1	0.879	1
ALMS1	MTOR	0.879	1
CSF1R	Del_1q44	0.879	1
CYP2C18	Amp_5q35.1	0.879	1
DNMT3A	GALNT7	0.879	1
DNMT3A	PARD6B	0.879	1
DNMT3A	SMARCB1	0.879	1
DNMT3A	WDR52	0.879	1
DNMT3A	ZFYVE26	0.879	1
F2RL1	Amp_5q35.1	0.879	1
FZR1	17q-Amp	0.879	1
GALNT7	RAI1	0.879	1
KCNK1	Amp_5q35.1	0.879	1
KDM6A	Del_9p21.3	0.879	1
MET	5q-Amp	0.879	1
NDUFA3	Amp_5q35.1	0.879	1
NKX2-1	Amp_5q35.1	0.879	1
PARD6B	RAI1	0.879	1
PCK1	RAI1	0.879	1
PTCH1	Del_1q44	0.879	1
RAI1	SMARCB1	0.879	1
RAI1	WDR52	0.879	1
RAI1	ZFYVE26	0.879	1
RALB	Amp_5q35.1	0.879	1
RCN1	Amp_5q35.1	0.879	1
RIN1	Amp_5q35.1	0.879	1
RNF113B	Amp_5q35.1	0.879	1
RNF144A	Amp_5q35.1	0.879	1
SLC14A1	Amp_5q35.1	0.879	1
SLC6A14	17q-Amp	0.879	1
SYNE1	3p-Amp	0.879	1
TMEM47	Amp_5q35.1	0.879	1
WASL	21q-Del	0.879	1
ZC3H3	17q-Amp	0.879	1
ZNHIT1	Amp_5q35.1	0.879	1
17q-Amp	Amp_Xq11.2	0.879	1
ADCY8	Del_3p21.2	0.88	1
ALMS1	ARHGAP35	0.88	1
ALMS1	CSF1R	0.88	1
ALMS1	EGFR	0.88	1
ALMS1	KIAA0922	0.88	1
ALMS1	PRKAG2	0.88	1
ALMS1	PTCH1	0.88	1
ARHGAP35	ZNF814	0.88	1
CDKN2A	Amp_7q31.2	0.88	1
CSF1R	ZNF814	0.88	1
CXorf23	Amp_7q31.2	0.88	1
DNAJA3	Amp_7q31.2	0.88	1
ECHDC2	Amp_7q31.2	0.88	1
EGFR	ZNF814	0.88	1
FAM178A	17q-Amp	0.88	1
GLS	17q-Amp	0.88	1
KIAA0922	ZNF814	0.88	1
KIF16B	Amp_7q31.2	0.88	1
NOM1	Amp_7q31.2	0.88	1
PAM	Amp_7q31.2	0.88	1
PBRM1	PTCH1	0.88	1
PRKAG2	ZNF814	0.88	1
PTCH1	ZNF814	0.88	1
VCL	Amp_7q31.2	0.88	1
WASL	17q-Amp	0.88	1
ARHGAP33	Del_1p31.1	0.881	1
ARID1A	16p-Amp	0.881	1
GPR50	Del_1p31.1	0.881	1
MTOR	SETD2	0.881	1
MYF6	Del_1p31.1	0.881	1
NASP	Del_1p31.1	0.881	1
NTRK3	12q-Amp	0.881	1
PARD6B	16q-Amp	0.881	1
PCK1	16q-Amp	0.881	1
PODXL	1p-Del	0.881	1
RILPL1	Del_1p31.1	0.881	1
RIMBP3	Del_1p31.1	0.881	1
SETD2	3q-Del	0.881	1
SMARCB1	16q-Amp	0.881	1
ZNF521	Del_1p31.1	0.881	1
ARAP3	MET	0.882	1
ARHGAP35	8p-Del	0.882	1
ARHGAP35	Del_13q13.2	0.882	1
ARID1A	PTEN	0.882	1
ARID1A	Amp_2q32.1	0.882	1
CACNA1C	17p-Del	0.882	1
CDKN2A	SYNE1	0.882	1
CSF1R	Del_9p23	0.882	1
CSF1R	Del_13q13.2	0.882	1
CSK	MET	0.882	1
CSK	2q-Amp	0.882	1
DNAJA3	SYNE1	0.882	1
ECHDC2	SYNE1	0.882	1
EGFR	Del_9p23	0.882	1
ENO1	MET	0.882	1
ENO1	2q-Amp	0.882	1
EPS15L1	3p-Amp	0.882	1
FZR1	MET	0.882	1
FZR1	2q-Amp	0.882	1
HSPA2	SYNE1	0.882	1
KIF16B	SYNE1	0.882	1
KLK10	SYNE1	0.882	1
MET	SLC6A14	0.882	1
MET	TCEB1	0.882	1
MET	ZC3H3	0.882	1
MET	Amp_Xq11.2	0.882	1
PAM	SYNE1	0.882	1
PRKAG2	Del_13q13.2	0.882	1
PTCH1	8p-Del	0.882	1
PTCH1	Del_9p23	0.882	1
SLC6A14	2q-Amp	0.882	1
STAG2	17p-Del	0.882	1
SYNE1	VCL	0.882	1
SYNE1	ZNF532	0.882	1
TCEB1	2q-Amp	0.882	1
ZC3H3	2q-Amp	0.882	1
20q-Amp	21q-Del	0.882	1
ADAM28	3p-Amp	0.883	1
ARID1A	18q-Del	0.883	1
ATM	Del_9p21.3	0.883	1
BCLAF1	Del_1p31.1	0.883	1
BRAF	14q-Del	0.883	1
C16orf78	3p-Amp	0.883	1
C9orf171	3p-Amp	0.883	1
CARKD	3p-Amp	0.883	1
CDCA8	3p-Amp	0.883	1
CDK12	NEFH	0.883	1
CDK12	NFE2L2	0.883	1
CDK12	PCF11	0.883	1
CUL3	FGFR3	0.883	1
CUL3	KRAS	0.883	1
CUL3	NTRK3	0.883	1
CUL3	PODXL	0.883	1
CUL3	SLC23A1	0.883	1
DPYSL4	3p-Amp	0.883	1
FAM178A	NEFH	0.883	1
FAM178A	NFE2L2	0.883	1
FAM178A	PCF11	0.883	1
FAM178A	VHL	0.883	1
FGFR3	NF2	0.883	1
FGFR3	Del_16q23.3	0.883	1
GLS	NEFH	0.883	1
GLS	NFE2L2	0.883	1
IMPA2	3p-Amp	0.883	1
INPP5E	3p-Amp	0.883	1
KRAS	NF2	0.883	1
KRAS	Del_16q23.3	0.883	1
MYF6	14q-Del	0.883	1
NEFH	TXNIP	0.883	1
NEFH	WASL	0.883	1
NF2	NOM1	0.883	1
NF2	NTRK3	0.883	1
NF2	SLC23A1	0.883	1
NFE2L2	TXNIP	0.883	1
NFE2L2	WASL	0.883	1
NOM1	Del_16q23.3	0.883	1
OR10G3	3p-Amp	0.883	1
PCF11	TXNIP	0.883	1
PCF11	WASL	0.883	1
PDLIM4	3p-Amp	0.883	1
PODXL	Del_16q23.3	0.883	1
PRDX5	3p-Amp	0.883	1
SCYL1	3p-Amp	0.883	1
SLC23A1	Del_16q23.3	0.883	1
SPATA13	3p-Amp	0.883	1
VHL	WASL	0.883	1
ZNF438	14q-Del	0.883	1
ZNF521	14q-Del	0.883	1
CUL3	Amp_5q35.1	0.884	1
CYP2C18	6q-Del	0.884	1
F2RL1	6q-Del	0.884	1
FGFR3	6p-Del	0.884	1
IFNB1	6q-Del	0.884	1
KDM5C	VHL	0.884	1
KDM6A	7q-Amp	0.884	1
MET	5p-Amp	0.884	1
NDUFA3	6q-Del	0.884	1
NEFH	12q-Amp	0.884	1
NF2	Amp_5q35.1	0.884	1
NKX2-1	6q-Del	0.884	1
NTRK3	6p-Del	0.884	1
ONECUT2	6q-Del	0.884	1
PARD6B	Del_1p36.31	0.884	1
PCF11	12q-Amp	0.884	1
RALB	6q-Del	0.884	1
RCN1	6q-Del	0.884	1
RIN1	6q-Del	0.884	1
RNF113B	6q-Del	0.884	1
RNF144A	6q-Del	0.884	1
SLC14A1	6q-Del	0.884	1
TMEM47	6q-Del	0.884	1
WDR52	Del_1p36.31	0.884	1
ZNF814	Del_1p36.31	0.884	1
ZNHIT1	6q-Del	0.884	1
ZNF814	8p-Del	0.885	1
ZNF814	Del_13q13.2	0.885	1
5q-Amp	Del_3p12.2	0.885	1
ATM	Del_3p26.3	0.886	1
CDKN2A	7q-Amp	0.886	1
CXorf23	7q-Amp	0.886	1
DNAJA3	7q-Amp	0.886	1
ECHDC2	7q-Amp	0.886	1
FAT1	3p-Amp	0.886	1
KDM6A	7p-Amp	0.886	1
KIF16B	7q-Amp	0.886	1
NIPBL	5q-Amp	0.886	1
NOM1	Del_8p23.2	0.886	1
NTRK3	Del_10q23.31	0.886	1
PAM	7q-Amp	0.886	1
PTEN	Del_4q34.3	0.886	1
SLC23A1	Del_8p23.2	0.886	1
VCL	7q-Amp	0.886	1
ACSF2	Amp_17q24.3	0.887	1
ARHGAP33	Amp_5q35.1	0.887	1
ATM	10q-Del	0.887	1
CDKN2A	7p-Amp	0.887	1
CXorf23	7p-Amp	0.887	1
DNAJA3	7p-Amp	0.887	1
ECHDC2	7p-Amp	0.887	1
EDIL3	Amp_5q35.1	0.887	1
GPR50	Amp_5q35.1	0.887	1
KIF16B	7p-Amp	0.887	1
MYF6	Amp_5q35.1	0.887	1
NASP	Amp_5q35.1	0.887	1
PAM	7p-Amp	0.887	1
SETD2	10q-Del	0.887	1
STXBP3	Amp_5q35.1	0.887	1
SYNE1	7q-Amp	0.887	1
VCL	7p-Amp	0.887	1
ZNF521	Amp_5q35.1	0.887	1
ARHGAP35	KDM6A	0.888	1
ARHGAP35	NF1	0.888	1
CSF1R	KDM6A	0.888	1
CSF1R	NF1	0.888	1
EGFR	KDM6A	0.888	1
EGFR	NF1	0.888	1
KDM6A	KIAA0922	0.888	1
KDM6A	PRKAG2	0.888	1
KDM6A	PTCH1	0.888	1
KIAA0922	NF1	0.888	1
NF1	PRKAG2	0.888	1
NF1	PTCH1	0.888	1
NFE2L2	TP53	0.888	1
ARHGAP33	ARID1A	0.889	1
ARID1A	BRAF	0.889	1
ARID1A	EDIL3	0.889	1
ARID1A	GPR50	0.889	1
ARID1A	MYF6	0.889	1
ARID1A	NASP	0.889	1
ARID1A	NUDT11	0.889	1
ARID1A	RIMBP3	0.889	1
ARID1A	STXBP3	0.889	1
ARID1A	ZNF438	0.889	1
ARID1A	ZNF521	0.889	1
FGFR3	20p-Amp	0.889	1
KDM6A	17p-Amp	0.889	1
KRAS	20p-Amp	0.889	1
NTRK3	20p-Amp	0.889	1
SLC23A1	20p-Amp	0.889	1
ADCY8	BCLAF1	0.89	1
ADCY8	EPS15L1	0.89	1
AR	FGFR3	0.89	1
AR	NOM1	0.89	1
AR	PODXL	0.89	1
AR	SLC23A1	0.89	1
AR	5p-Amp	0.89	1
BCLAF1	GALNT7	0.89	1
BCLAF1	PCK1	0.89	1
BCLAF1	SMARCB1	0.89	1
BCLAF1	WDR52	0.89	1
BCLAF1	ZFYVE26	0.89	1
CACNA1C	FGFR3	0.89	1
CACNA1C	KRAS	0.89	1
CACNA1C	NOM1	0.89	1
CACNA1C	PODXL	0.89	1
CACNA1C	SLC23A1	0.89	1
EPS15L1	GALNT7	0.89	1
EPS15L1	PCK1	0.89	1
EPS15L1	SMARCB1	0.89	1
EPS15L1	WDR52	0.89	1
EPS15L1	ZFYVE26	0.89	1
FGFR3	NIPBL	0.89	1
FGFR3	PIK3CA	0.89	1
KIAA0922	Amp_17q24.3	0.89	1
KRAS	NIPBL	0.89	1
KRAS	PIK3CA	0.89	1
KRAS	STAG2	0.89	1
NEFH	3p-Del	0.89	1
NIPBL	NOM1	0.89	1
NIPBL	PODXL	0.89	1
NIPBL	SLC23A1	0.89	1
NIPBL	5p-Amp	0.89	1
NOM1	PIK3CA	0.89	1
NOM1	STAG2	0.89	1
NTRK3	PIK3CA	0.89	1
NTRK3	STAG2	0.89	1
PIK3CA	PODXL	0.89	1
PIK3CA	SLC23A1	0.89	1
PODXL	STAG2	0.89	1
PRKAG2	Amp_17q24.3	0.89	1
ARAP3	16p-Amp	0.891	1
BCLAF1	Amp_5q35.1	0.891	1
FGFR3	20q-Amp	0.891	1
KRAS	20q-Amp	0.891	1
NTRK3	20q-Amp	0.891	1
SLC23A1	20q-Amp	0.891	1
SLC6A14	16p-Amp	0.891	1
ZC3H3	16p-Amp	0.891	1
16p-Amp	Amp_Xq11.2	0.891	1
ACSF2	CDK12	0.892	1
ACSF2	TXNIP	0.892	1
ACSF2	WASL	0.892	1
ALMS1	Amp_3q26.32	0.892	1
CDK12	DNMT3A	0.892	1
CDK12	RAI1	0.892	1
CDKN2A	Del_11q23.1	0.892	1
CXorf23	Del_11q23.1	0.892	1
DNAJA3	Del_11q23.1	0.892	1
DNMT3A	FAM178A	0.892	1
DNMT3A	GLS	0.892	1
DNMT3A	TXNIP	0.892	1
ECHDC2	Del_11q23.1	0.892	1
FAM178A	RAI1	0.892	1
GLS	RAI1	0.892	1
HSPA2	Del_11q23.1	0.892	1
KIF16B	Del_11q23.1	0.892	1
KLK10	Del_11q23.1	0.892	1
PAM	Del_11q23.1	0.892	1
RAI1	TXNIP	0.892	1
RAI1	WASL	0.892	1
SMARCB1	Amp_7q31.2	0.892	1
WDR52	Amp_7q31.2	0.892	1
ZNF532	Del_11q23.1	0.892	1
ZNF814	Amp_3q26.32	0.892	1
Del_3p14.1	Del_10q23.31	0.892	1
ARHGAP35	17p-Del	0.893	1
CDK12	13q-Del	0.893	1
CSF1R	17p-Del	0.893	1
CYP2C18	12p-Amp	0.893	1
F2RL1	12p-Amp	0.893	1
FAM178A	3q-Amp	0.893	1
FAM178A	13q-Del	0.893	1
GLS	3q-Amp	0.893	1
GLS	13q-Del	0.893	1
IFNB1	12p-Amp	0.893	1
KCNK1	12p-Amp	0.893	1
NDUFA3	12p-Amp	0.893	1
NF1	3q-Del	0.893	1
NF1	Del_2q37.3	0.893	1
NKX2-1	12p-Amp	0.893	1
ONECUT2	12p-Amp	0.893	1
RALB	12p-Amp	0.893	1
RCN1	12p-Amp	0.893	1
RIN1	12p-Amp	0.893	1
RNF113B	12p-Amp	0.893	1
RNF144A	12p-Amp	0.893	1
TMEM47	12p-Amp	0.893	1
TXNIP	13q-Del	0.893	1
WASL	13q-Del	0.893	1
ZNHIT1	12p-Amp	0.893	1
ADCY8	Del_14q31.1	0.894	1
CACNA1C	SETD2	0.894	1
EDIL3	VHL	0.894	1
NEFH	20p-Amp	0.894	1
NUDT11	VHL	0.894	1
VHL	ZNF521	0.894	1
ZC3H3	17p-Amp	0.894	1
CACNA1C	Del_1p31.1	0.895	1
GPR50	6q-Del	0.895	1
MYF6	6q-Del	0.895	1
NASP	6q-Del	0.895	1
RILPL1	6q-Del	0.895	1
RIMBP3	6q-Del	0.895	1
STAG2	Del_1p31.1	0.895	1
WASL	16p-Amp	0.895	1
ZNF521	6q-Del	0.895	1
AR	Del_11q23.1	0.896	1
ARHGAP35	5q-Amp	0.896	1
CACNA1C	Del_11q23.1	0.896	1
FAM178A	Del_3p14.1	0.896	1
GLS	Del_3p14.1	0.896	1
KDM5C	10q-Del	0.896	1
NIPBL	Del_11q23.1	0.896	1
NTRK3	10q-Del	0.896	1
PODXL	10q-Del	0.896	1
7q-Amp	Amp_5q35.1	0.896	1
10q-Del	Del_3p14.1	0.896	1
ALMS1	KRAS	0.897	1
ALMS1	NOM1	0.897	1
ALMS1	NTRK3	0.897	1
ALMS1	SLC23A1	0.897	1
ARHGAP35	NEFH	0.897	1
ARHGAP35	NFE2L2	0.897	1
ARHGAP35	PCF11	0.897	1
CSF1R	NEFH	0.897	1
CSF1R	NFE2L2	0.897	1
CSF1R	PCF11	0.897	1
CYP2C18	12q-Amp	0.897	1
CYP2C18	1p-Del	0.897	1
EGFR	NEFH	0.897	1
EGFR	NFE2L2	0.897	1
EGFR	PCF11	0.897	1
F2RL1	12q-Amp	0.897	1
F2RL1	1p-Del	0.897	1
FGFR3	ZNF814	0.897	1
IFNB1	12q-Amp	0.897	1
IFNB1	1p-Del	0.897	1
KCNK1	12q-Amp	0.897	1
KCNK1	1p-Del	0.897	1
KDM5C	Del_16q23.3	0.897	1
KIAA0922	NEFH	0.897	1
KIAA0922	NFE2L2	0.897	1
KIAA0922	PCF11	0.897	1
KRAS	ZNF814	0.897	1
NDUFA3	12q-Amp	0.897	1
NDUFA3	1p-Del	0.897	1
NEFH	PRKAG2	0.897	1
NEFH	PTCH1	0.897	1
NEFH	20q-Amp	0.897	1
NFE2L2	PRKAG2	0.897	1
NKX2-1	12q-Amp	0.897	1
NKX2-1	1p-Del	0.897	1
NOM1	ZNF814	0.897	1
NTRK3	ZNF814	0.897	1
ONECUT2	12q-Amp	0.897	1
ONECUT2	1p-Del	0.897	1
PCF11	PRKAG2	0.897	1
PCF11	PTCH1	0.897	1
PODXL	ZNF814	0.897	1
RAI1	12p-Amp	0.897	1
RALB	12q-Amp	0.897	1
RALB	1p-Del	0.897	1
RCN1	12q-Amp	0.897	1
RIN1	12q-Amp	0.897	1
RIN1	1p-Del	0.897	1
RNF113B	12q-Amp	0.897	1
RNF113B	1p-Del	0.897	1
RNF144A	12q-Amp	0.897	1
RNF144A	1p-Del	0.897	1
SLC14A1	1p-Del	0.897	1
SLC23A1	ZNF814	0.897	1
TMEM47	12q-Amp	0.897	1
TMEM47	1p-Del	0.897	1
ZNHIT1	12q-Amp	0.897	1
ZNHIT1	1p-Del	0.897	1
AR	21q-Del	0.898	1
NFE2L2	Del_4q34.3	0.898	1
NIPBL	21q-Del	0.898	1
PCF11	Del_4q34.3	0.898	1
ARHGAP35	5p-Amp	0.899	1
ARHGAP35	9q-Del	0.899	1
CDKN2A	KDM5C	0.899	1
CSF1R	9q-Del	0.899	1
CSK	Del_6q26	0.899	1
CXorf23	KDM5C	0.899	1
CYP2C18	6p-Del	0.899	1
DNAJA3	KDM5C	0.899	1
ECHDC2	KDM5C	0.899	1
EGFR	9q-Del	0.899	1
ENO1	Del_6q26	0.899	1
F2RL1	6p-Del	0.899	1
FAM178A	Del_2q22.1	0.899	1
FZR1	Del_6q26	0.899	1
GLS	Del_2q22.1	0.899	1
HSPA2	KDM5C	0.899	1
IFNB1	6p-Del	0.899	1
KCNK1	6p-Del	0.899	1
KDM5C	KIF16B	0.899	1
KDM5C	KLK10	0.899	1
KDM5C	PAM	0.899	1
KDM5C	VCL	0.899	1
KDM5C	ZNF532	0.899	1
NDUFA3	6p-Del	0.899	1
NKX2-1	6p-Del	0.899	1
ONECUT2	6p-Del	0.899	1
PTCH1	9q-Del	0.899	1
RALB	6p-Del	0.899	1
RCN1	6p-Del	0.899	1
RIN1	6p-Del	0.899	1
RNF113B	6p-Del	0.899	1
RNF144A	6p-Del	0.899	1
SLC14A1	6p-Del	0.899	1
SLC6A14	Del_6q26	0.899	1
TMEM47	6p-Del	0.899	1
WASL	Del_2q22.1	0.899	1
ZNHIT1	6p-Del	0.899	1
3q-Amp	Del_16q23.3	0.899	1
ADCY8	GALNT7	0.9	1
ADCY8	PARD6B	0.9	1
ADCY8	PCK1	0.9	1
ADCY8	SMARCB1	0.9	1
ADCY8	WDR52	0.9	1
ADCY8	ZFYVE26	0.9	1
ADCY8	Del_3p26.3	0.9	1
CARKD	Del_3p21.2	0.9	1
CDCA8	Del_3p21.2	0.9	1
CYP2C18	Del_8p23.2	0.9	1
CYP2C18	Del_10q23.31	0.9	1
F2RL1	Del_8p23.2	0.9	1
F2RL1	Del_10q23.31	0.9	1
FAM178A	17p-Amp	0.9	1
GALNT7	PARD6B	0.9	1
GALNT7	PCK1	0.9	1
GALNT7	WDR52	0.9	1
GLS	17p-Amp	0.9	1
IFNB1	Del_10q23.31	0.9	1
IMPA2	Del_3p21.2	0.9	1
INPP5E	Del_3p21.2	0.9	1
KCNK1	Del_8p23.2	0.9	1
KCNK1	Del_10q23.31	0.9	1
NDUFA3	Del_8p23.2	0.9	1
NDUFA3	Del_10q23.31	0.9	1
NEFH	Del_9p21.3	0.9	1
NEK8	Del_3p21.2	0.9	1
NKX2-1	Del_8p23.2	0.9	1
NKX2-1	Del_10q23.31	0.9	1
ONECUT2	Del_8p23.2	0.9	1
ONECUT2	Del_10q23.31	0.9	1
OR10G3	Del_3p21.2	0.9	1
PARD6B	PCK1	0.9	1
PARD6B	SMARCB1	0.9	1
PARD6B	WDR52	0.9	1
PARD6B	ZFYVE26	0.9	1
PCK1	SMARCB1	0.9	1
PCK1	WDR52	0.9	1
PCK1	ZFYVE26	0.9	1
PDLIM4	Del_3p21.2	0.9	1
PRDX5	Del_3p21.2	0.9	1
RALB	Del_10q23.31	0.9	1
RCN1	Del_8p23.2	0.9	1
RIN1	Del_10q23.31	0.9	1
RNF113B	Del_8p23.2	0.9	1
RNF113B	Del_10q23.31	0.9	1
RNF144A	Del_8p23.2	0.9	1
SLC14A1	Del_8p23.2	0.9	1
SLC14A1	Del_10q23.31	0.9	1
SMARCB1	WDR52	0.9	1
SMARCB1	ZFYVE26	0.9	1
SPATA13	Del_3p21.2	0.9	1
TMEM47	Del_8p23.2	0.9	1
TMEM47	Del_10q23.31	0.9	1
WASL	17p-Amp	0.9	1
WDR52	ZFYVE26	0.9	1
ZNHIT1	Del_8p23.2	0.9	1
ZNHIT1	Del_10q23.31	0.9	1
Del_2q37.3	Del_4q34.3	0.9	1
ARAP3	ATM	0.901	1
ARAP3	FAT1	0.901	1
ARAP3	SMARCA4	0.901	1
ARHGAP33	CUL3	0.901	1
ARHGAP33	NF2	0.901	1
ATM	CSK	0.901	1
ATM	ENO1	0.901	1
ATM	FZR1	0.901	1
ATM	SLC6A14	0.901	1
ATM	TCEB1	0.901	1
ATM	ZC3H3	0.901	1
ATM	Amp_Xq11.2	0.901	1
BCLAF1	CDK12	0.901	1
BCLAF1	FAM178A	0.901	1
BCLAF1	GLS	0.901	1
BCLAF1	TXNIP	0.901	1
BCLAF1	WASL	0.901	1
BRAF	CUL3	0.901	1
BRAF	NF2	0.901	1
BRAF	Del_16q23.3	0.901	1
CDK12	EPS15L1	0.901	1
CSK	FAT1	0.901	1
CSK	SMARCA4	0.901	1
CUL3	EDIL3	0.901	1
CUL3	GPR50	0.901	1
CUL3	MYF6	0.901	1
CUL3	NASP	0.901	1
CUL3	NUDT11	0.901	1
CUL3	RILPL1	0.901	1
CUL3	RIMBP3	0.901	1
CUL3	STXBP3	0.901	1
CUL3	ZNF438	0.901	1
CUL3	ZNF521	0.901	1
EDIL3	NF2	0.901	1
EDIL3	Del_16q23.3	0.901	1
ENO1	SMARCA4	0.901	1
EPS15L1	FAM178A	0.901	1
EPS15L1	GLS	0.901	1
EPS15L1	TXNIP	0.901	1
EPS15L1	WASL	0.901	1
F2RL1	20p-Amp	0.901	1
FAT1	FZR1	0.901	1
FAT1	SLC6A14	0.901	1
FAT1	TCEB1	0.901	1
FAT1	Amp_Xq11.2	0.901	1
FZR1	SMARCA4	0.901	1
GPR50	NF2	0.901	1
GPR50	Del_16q23.3	0.901	1
IFNB1	20p-Amp	0.901	1
KCNK1	20p-Amp	0.901	1
MYF6	NF2	0.901	1
MYF6	Del_16q23.3	0.901	1
NASP	Del_16q23.3	0.901	1
NDUFA3	20p-Amp	0.901	1
NF2	RILPL1	0.901	1
NF2	RIMBP3	0.901	1
NF2	STXBP3	0.901	1
NF2	ZNF438	0.901	1
NF2	ZNF521	0.901	1
NUDT11	Del_16q23.3	0.901	1
ONECUT2	20p-Amp	0.901	1
RALB	20p-Amp	0.901	1
RCN1	20p-Amp	0.901	1
RILPL1	Del_16q23.3	0.901	1
RIMBP3	Del_16q23.3	0.901	1
RIN1	20p-Amp	0.901	1
RNF113B	20p-Amp	0.901	1
RNF144A	20p-Amp	0.901	1
SLC6A14	SMARCA4	0.901	1
SMARCA4	TCEB1	0.901	1
SMARCA4	ZC3H3	0.901	1
SMARCA4	Amp_Xq11.2	0.901	1
SMARCB1	7q-Amp	0.901	1
STXBP3	Del_16q23.3	0.901	1
TMEM47	20p-Amp	0.901	1
WDR52	7q-Amp	0.901	1
ZNF438	Del_16q23.3	0.901	1
ZNF521	Del_16q23.3	0.901	1
ZNHIT1	20p-Amp	0.901	1
12q-Amp	5q-Amp	0.901	1
ARHGAP35	9p-Del	0.902	1
BCLAF1	6q-Del	0.902	1
CSF1R	SETD2	0.902	1
CSF1R	9p-Del	0.902	1
EGFR	9p-Del	0.902	1
F2RL1	20q-Amp	0.902	1
GALNT7	3p-Amp	0.902	1
GLS	18q-Del	0.902	1
IFNB1	20q-Amp	0.902	1
KCNK1	20q-Amp	0.902	1
KIAA0922	SETD2	0.902	1
NDUFA3	20q-Amp	0.902	1
ONECUT2	20q-Amp	0.902	1
PCK1	3p-Amp	0.902	1
PTCH1	9p-Del	0.902	1
RALB	20q-Amp	0.902	1
RCN1	20q-Amp	0.902	1
RIN1	20q-Amp	0.902	1
RNF113B	20q-Amp	0.902	1
RNF144A	20q-Amp	0.902	1
TMEM47	20q-Amp	0.902	1
TXNIP	18q-Del	0.902	1
ZNHIT1	20q-Amp	0.902	1
ALMS1	5q-Amp	0.903	1
CDKN2A	PTEN	0.903	1
CXorf23	PTEN	0.903	1
CXorf23	Amp_2q32.1	0.903	1
DNAJA3	PTEN	0.903	1
DNAJA3	Amp_2q32.1	0.903	1
ECHDC2	PTEN	0.903	1
ECHDC2	Amp_2q32.1	0.903	1
ENO1	Del_3p21.2	0.903	1
FGFR3	Del_2q37.3	0.903	1
GPR50	Del_3p14.1	0.903	1
HSPA2	PTEN	0.903	1
HSPA2	Amp_2q32.1	0.903	1
KIF16B	PTEN	0.903	1
KIF16B	Amp_2q32.1	0.903	1
KLK10	PTEN	0.903	1
KLK10	Amp_2q32.1	0.903	1
NTRK3	Del_2q37.3	0.903	1
PAM	PTEN	0.903	1
PODXL	Del_2q37.3	0.903	1
PTEN	VCL	0.903	1
PTEN	ZNF532	0.903	1
SMARCB1	7p-Amp	0.903	1
STXBP3	Del_3p14.1	0.903	1
VHL	Del_8p23.2	0.903	1
WDR52	7p-Amp	0.903	1
ZC3H3	Del_3p21.2	0.903	1
ZNF521	Del_3p14.1	0.903	1
ZNF532	Amp_2q32.1	0.903	1
ZNF814	5q-Amp	0.903	1
6q-Del	Del_3p26.3	0.903	1
Amp_Xq11.2	Del_3p21.2	0.903	1
ARAP3	16q-Amp	0.904	1
ARID1A	Del_8p23.2	0.904	1
CYP2C18	Del_9p21.3	0.904	1
F2RL1	Del_9p21.3	0.904	1
FGFR3	NF1	0.904	1
IFNB1	Del_9p21.3	0.904	1
KDM6A	KRAS	0.904	1
KDM6A	NOM1	0.904	1
KDM6A	NTRK3	0.904	1
KDM6A	PODXL	0.904	1
KRAS	NF1	0.904	1
NEFH	Amp_7q31.2	0.904	1
NF1	PODXL	0.904	1
NF1	SLC23A1	0.904	1
NF1	SYNE1	0.904	1
NFE2L2	Amp_7q31.2	0.904	1
NKX2-1	Del_9p21.3	0.904	1
ONECUT2	Del_9p21.3	0.904	1
PCF11	Amp_7q31.2	0.904	1
RALB	Del_9p21.3	0.904	1
RIN1	Del_9p21.3	0.904	1
RNF113B	Del_9p21.3	0.904	1
RNF144A	Del_9p21.3	0.904	1
SLC14A1	Del_9p21.3	0.904	1
SLC6A14	16q-Amp	0.904	1
TMEM47	Del_9p21.3	0.904	1
ZC3H3	16q-Amp	0.904	1
ZNHIT1	Del_9p21.3	0.904	1
ACSF2	ARHGAP35	0.905	1
ACSF2	CSF1R	0.905	1
ACSF2	EGFR	0.905	1
ACSF2	PRKAG2	0.905	1
ACSF2	PTCH1	0.905	1
ADAM28	TP53	0.905	1
ARHGAP35	DNMT3A	0.905	1
ARHGAP35	RAI1	0.905	1
C16orf78	TP53	0.905	1
C9orf171	TP53	0.905	1
CARKD	TP53	0.905	1
CDCA8	TP53	0.905	1
CSK	Del_1p36.31	0.905	1
CYP2C18	10q-Del	0.905	1
DNMT3A	EGFR	0.905	1
DNMT3A	KIAA0922	0.905	1
DNMT3A	PRKAG2	0.905	1
DNMT3A	PTCH1	0.905	1
DPYSL4	TP53	0.905	1
EGFR	RAI1	0.905	1
ENO1	Del_1p36.31	0.905	1
F2RL1	10q-Del	0.905	1
IFNB1	10q-Del	0.905	1
IMPA2	TP53	0.905	1
INPP5E	TP53	0.905	1
KCNK1	10q-Del	0.905	1
KIAA0922	RAI1	0.905	1
NDUFA3	10q-Del	0.905	1
NEK8	TP53	0.905	1
NKX2-1	10q-Del	0.905	1
ONECUT2	10q-Del	0.905	1
OR10G3	TP53	0.905	1
PDLIM4	TP53	0.905	1
PRDX5	TP53	0.905	1
PRKAG2	RAI1	0.905	1
PRKAG2	21q-Del	0.905	1
PTCH1	RAI1	0.905	1
RALB	10q-Del	0.905	1
RIN1	10q-Del	0.905	1
RNF113B	10q-Del	0.905	1
SCYL1	TP53	0.905	1
SLC14A1	10q-Del	0.905	1
SLC6A14	Del_1p36.31	0.905	1
STAG2	Amp_5q35.1	0.905	1
SYNE1	6p-Del	0.905	1
TMEM47	10q-Del	0.905	1
ZNHIT1	10q-Del	0.905	1
Amp_2q32.1	Del_9p21.3	0.905	1
ACSF2	1p-Del	0.906	1
RAI1	12q-Amp	0.906	1
TXNIP	Del_6q26	0.906	1
ALMS1	5p-Amp	0.907	1
ALMS1	9q-Del	0.907	1
AR	ARHGAP33	0.907	1
AR	BRAF	0.907	1
AR	EDIL3	0.907	1
AR	GPR50	0.907	1
AR	NASP	0.907	1
AR	NUDT11	0.907	1
AR	RILPL1	0.907	1
AR	RIMBP3	0.907	1
AR	STXBP3	0.907	1
AR	ZNF521	0.907	1
ARHGAP33	CACNA1C	0.907	1
ARHGAP33	PIK3CA	0.907	1
ARHGAP33	STAG2	0.907	1
BRAF	CACNA1C	0.907	1
BRAF	NIPBL	0.907	1
BRAF	PIK3CA	0.907	1
BRAF	STAG2	0.907	1
CACNA1C	GPR50	0.907	1
CACNA1C	MYF6	0.907	1
CACNA1C	NASP	0.907	1
CACNA1C	NUDT11	0.907	1
CACNA1C	RILPL1	0.907	1
CACNA1C	RIMBP3	0.907	1
CACNA1C	STXBP3	0.907	1
CACNA1C	ZNF438	0.907	1
CACNA1C	ZNF521	0.907	1
EDIL3	NIPBL	0.907	1
EDIL3	PIK3CA	0.907	1
EDIL3	STAG2	0.907	1
GPR50	NIPBL	0.907	1
GPR50	PIK3CA	0.907	1
GPR50	STAG2	0.907	1
MTOR	PCF11	0.907	1
MYF6	NIPBL	0.907	1
MYF6	PIK3CA	0.907	1
MYF6	STAG2	0.907	1
NASP	NIPBL	0.907	1
NASP	PIK3CA	0.907	1
NASP	STAG2	0.907	1
NFE2L2	3q-Del	0.907	1
NIPBL	NUDT11	0.907	1
NIPBL	RIMBP3	0.907	1
NIPBL	STXBP3	0.907	1
NIPBL	ZNF438	0.907	1
NIPBL	ZNF521	0.907	1
NUDT11	PIK3CA	0.907	1
NUDT11	STAG2	0.907	1
PIK3CA	RILPL1	0.907	1
PIK3CA	RIMBP3	0.907	1
PIK3CA	STXBP3	0.907	1
PIK3CA	ZNF438	0.907	1
PIK3CA	ZNF521	0.907	1
PTEN	18q-Del	0.907	1
RILPL1	STAG2	0.907	1
RIMBP3	STAG2	0.907	1
STAG2	STXBP3	0.907	1
STAG2	ZNF438	0.907	1
STAG2	ZNF521	0.907	1
VCL	Del_3p12.2	0.907	1
ZNF532	Del_3p12.2	0.907	1
ZNF814	9q-Del	0.907	1
AR	KDM5C	0.908	1
NF1	Del_1p36.31	0.908	1
PODXL	Del_1q44	0.908	1
SYNE1	21q-Del	0.908	1
ARHGAP33	12p-Amp	0.909	1
BRAF	12p-Amp	0.909	1
C16orf78	Del_3p26.3	0.909	1
CARKD	Del_3p26.3	0.909	1
CDCA8	Del_3p26.3	0.909	1
CYP2C18	Del_2q37.3	0.909	1
DPYSL4	Del_3p26.3	0.909	1
EDIL3	12p-Amp	0.909	1
F2RL1	Del_2q37.3	0.909	1
IFNB1	Del_2q37.3	0.909	1
IMPA2	Del_3p26.3	0.909	1
INPP5E	Del_3p26.3	0.909	1
KCNK1	Del_2q37.3	0.909	1
NDUFA3	Del_2q37.3	0.909	1
NEFH	16p-Amp	0.909	1
NEK8	Del_3p26.3	0.909	1
NFE2L2	16p-Amp	0.909	1
NKX2-1	Del_2q37.3	0.909	1
ONECUT2	Del_2q37.3	0.909	1
OR10G3	Del_3p26.3	0.909	1
PCF11	16p-Amp	0.909	1
PDLIM4	Del_3p26.3	0.909	1
PRDX5	Del_3p26.3	0.909	1
RAI1	6p-Del	0.909	1
RALB	Del_2q37.3	0.909	1
RCN1	Del_2q37.3	0.909	1
RILPL1	12p-Amp	0.909	1
RIMBP3	12p-Amp	0.909	1
RNF113B	Del_2q37.3	0.909	1
RNF144A	Del_2q37.3	0.909	1
SLC14A1	Del_2q37.3	0.909	1
TMEM47	Del_2q37.3	0.909	1
ZNF438	12p-Amp	0.909	1
ZNF521	12p-Amp	0.909	1
ZNHIT1	Del_2q37.3	0.909	1
3p-Amp	Del_11q23.1	0.909	1
10q-Del	18p-Del	0.909	1
ADAM28	Del_4q34.3	0.91	1
ATM	SMARCA4	0.91	1
C16orf78	Del_4q34.3	0.91	1
C9orf171	Del_4q34.3	0.91	1
CARKD	Del_4q34.3	0.91	1
CDCA8	Del_4q34.3	0.91	1
CDKN2A	MET	0.91	1
CXorf23	MET	0.91	1
CXorf23	2q-Amp	0.91	1
DNAJA3	2q-Amp	0.91	1
DPYSL4	Del_4q34.3	0.91	1
ECHDC2	MET	0.91	1
ECHDC2	2q-Amp	0.91	1
FAT1	SMARCA4	0.91	1
FGFR3	Del_9p23	0.91	1
HSPA2	MET	0.91	1
HSPA2	2q-Amp	0.91	1
IMPA2	Del_4q34.3	0.91	1
INPP5E	Del_4q34.3	0.91	1
KIF16B	MET	0.91	1
KIF16B	2q-Amp	0.91	1
KLK10	MET	0.91	1
KLK10	2q-Amp	0.91	1
MET	VCL	0.91	1
MET	ZNF532	0.91	1
MET	1p-Del	0.91	1
NEK8	Del_4q34.3	0.91	1
NOM1	8p-Del	0.91	1
OR10G3	Del_4q34.3	0.91	1
PARD6B	Del_1p31.1	0.91	1
PDLIM4	Del_4q34.3	0.91	1
PODXL	Del_9p23	0.91	1
PRDX5	Del_4q34.3	0.91	1
SCYL1	Del_4q34.3	0.91	1
SETD2	Del_3p12.2	0.91	1
SLC23A1	8p-Del	0.91	1
SPATA13	Del_4q34.3	0.91	1
SYNE1	Del_10q23.31	0.91	1
VCL	2q-Amp	0.91	1
ZNF532	2q-Amp	0.91	1
21q-Del	Amp_17q24.3	0.91	1
ADCY8	CDK12	0.911	1
ADCY8	FAM178A	0.911	1
ADCY8	TXNIP	0.911	1
ADCY8	WASL	0.911	1
ARAP3	ARID1A	0.911	1
ARID1A	CSK	0.911	1
ARID1A	ENO1	0.911	1
ARID1A	FZR1	0.911	1
ARID1A	SLC6A14	0.911	1
ARID1A	TCEB1	0.911	1
ARID1A	ZC3H3	0.911	1
ARID1A	Amp_Xq11.2	0.911	1
CDK12	PARD6B	0.911	1
CDK12	PCK1	0.911	1
CDK12	SMARCB1	0.911	1
CDK12	WDR52	0.911	1
CDK12	ZFYVE26	0.911	1
CYP2C18	Del_1q44	0.911	1
F2RL1	Del_1q44	0.911	1
FAM178A	PARD6B	0.911	1
FAM178A	SMARCB1	0.911	1
FAM178A	WDR52	0.911	1
FAM178A	ZFYVE26	0.911	1
FGFR3	NEFH	0.911	1
FGFR3	PCF11	0.911	1
GALNT7	GLS	0.911	1
GALNT7	TXNIP	0.911	1
GLS	PARD6B	0.911	1
GLS	PCK1	0.911	1
GLS	SMARCB1	0.911	1
GLS	WDR52	0.911	1
IFNB1	Del_1q44	0.911	1
KCNK1	Del_1q44	0.911	1
KRAS	NEFH	0.911	1
KRAS	NFE2L2	0.911	1
KRAS	PCF11	0.911	1
NDUFA3	Del_1q44	0.911	1
NEFH	NTRK3	0.911	1
NEFH	PODXL	0.911	1
NEFH	SLC23A1	0.911	1
NFE2L2	NOM1	0.911	1
NFE2L2	NTRK3	0.911	1
NFE2L2	PODXL	0.911	1
NFE2L2	SLC23A1	0.911	1
NKX2-1	Del_1q44	0.911	1
NOM1	PCF11	0.911	1
NTRK3	PCF11	0.911	1
ONECUT2	Del_1q44	0.911	1
PARD6B	TXNIP	0.911	1
PARD6B	WASL	0.911	1
PCF11	PODXL	0.911	1
PCF11	SLC23A1	0.911	1
PCK1	TXNIP	0.911	1
PCK1	WASL	0.911	1
RALB	Del_1q44	0.911	1
RIN1	Del_1q44	0.911	1
RNF113B	Del_1q44	0.911	1
RNF144A	Del_1q44	0.911	1
SETD2	ZNF814	0.911	1
SLC14A1	Del_1q44	0.911	1
SMARCB1	TXNIP	0.911	1
TMEM47	Del_1q44	0.911	1
TXNIP	WDR52	0.911	1
TXNIP	ZFYVE26	0.911	1
WASL	WDR52	0.911	1
WASL	ZFYVE26	0.911	1
ZNHIT1	Del_1q44	0.911	1
Del_6q26	Del_14q31.1	0.911	1
ACSF2	Del_4q34.3	0.912	1
ADCY8	14q-Del	0.912	1
ARID1A	3p-Del	0.912	1
ATM	Del_9p23	0.912	1
DNMT3A	Del_4q34.3	0.912	1
FAM178A	16q-Amp	0.912	1
GLS	18p-Del	0.912	1
HSPA2	PBRM1	0.912	1
MTOR	Del_3p12.2	0.912	1
PBRM1	VCL	0.912	1
PBRM1	ZNF532	0.912	1
TXNIP	18p-Del	0.912	1
WASL	16q-Amp	0.912	1
Amp_Xq11.2	Del_14q31.1	0.912	1
ALMS1	ARHGAP33	0.913	1
ALMS1	BRAF	0.913	1
ALMS1	EDIL3	0.913	1
ALMS1	GPR50	0.913	1
ALMS1	MYF6	0.913	1
ALMS1	NASP	0.913	1
ALMS1	NUDT11	0.913	1
ALMS1	RILPL1	0.913	1
ALMS1	RIMBP3	0.913	1
ALMS1	STXBP3	0.913	1
ALMS1	ZNF438	0.913	1
ALMS1	ZNF521	0.913	1
ARHGAP33	ZNF814	0.913	1
ARHGAP35	BCLAF1	0.913	1
ARHGAP35	EPS15L1	0.913	1
BCLAF1	CSF1R	0.913	1
BCLAF1	EGFR	0.913	1
BCLAF1	KIAA0922	0.913	1
BCLAF1	PRKAG2	0.913	1
BCLAF1	PTCH1	0.913	1
BRAF	ZNF814	0.913	1
CSF1R	EPS15L1	0.913	1
CYP2C18	8p-Del	0.913	1
CYP2C18	Del_9p23	0.913	1
CYP2C18	Del_13q13.2	0.913	1
EDIL3	ZNF814	0.913	1
EPS15L1	PRKAG2	0.913	1
EPS15L1	PTCH1	0.913	1
F2RL1	8p-Del	0.913	1
F2RL1	Del_9p23	0.913	1
F2RL1	Del_13q13.2	0.913	1
GPR50	ZNF814	0.913	1
IFNB1	Del_9p23	0.913	1
KCNK1	8p-Del	0.913	1
KCNK1	Del_13q13.2	0.913	1
MYF6	ZNF814	0.913	1
NASP	ZNF814	0.913	1
NDUFA3	8p-Del	0.913	1
NKX2-1	8p-Del	0.913	1
NKX2-1	Del_9p23	0.913	1
NKX2-1	Del_13q13.2	0.913	1
NUDT11	ZNF814	0.913	1
ONECUT2	8p-Del	0.913	1
ONECUT2	Del_9p23	0.913	1
ONECUT2	Del_13q13.2	0.913	1
PBRM1	14q-Del	0.913	1
RALB	Del_9p23	0.913	1
RALB	Del_13q13.2	0.913	1
RCN1	8p-Del	0.913	1
RCN1	Del_13q13.2	0.913	1
RIMBP3	ZNF814	0.913	1
RIN1	Del_9p23	0.913	1
RIN1	Del_13q13.2	0.913	1
RNF113B	8p-Del	0.913	1
RNF113B	Del_9p23	0.913	1
RNF113B	Del_13q13.2	0.913	1
RNF144A	8p-Del	0.913	1
RNF144A	Del_9p23	0.913	1
RNF144A	Del_13q13.2	0.913	1
SETD2	18p-Del	0.913	1
SLC14A1	8p-Del	0.913	1
SLC14A1	Del_9p23	0.913	1
SLC14A1	Del_13q13.2	0.913	1
STXBP3	ZNF814	0.913	1
TMEM47	8p-Del	0.913	1
TMEM47	Del_9p23	0.913	1
TMEM47	Del_13q13.2	0.913	1
ZNF438	ZNF814	0.913	1
ZNHIT1	8p-Del	0.913	1
ZNHIT1	Del_9p23	0.913	1
ZNHIT1	Del_13q13.2	0.913	1
ACSF2	20p-Amp	0.914	1
AR	PTEN	0.914	1
AR	Amp_2q32.1	0.914	1
ARID1A	Del_9p21.3	0.914	1
CACNA1C	3q-Amp	0.914	1
CACNA1C	13q-Del	0.914	1
CACNA1C	Amp_2q32.1	0.914	1
CDK12	Del_1p36.31	0.914	1
DNMT3A	20p-Amp	0.914	1
FAM178A	Del_1p36.31	0.914	1
NEFH	7q-Amp	0.914	1
NFE2L2	7q-Amp	0.914	1
PCF11	17p-Amp	0.914	1
PTEN	STAG2	0.914	1
STAG2	13q-Del	0.914	1
STAG2	Amp_2q32.1	0.914	1
16q-Amp	5q-Amp	0.914	1
ADAM28	MTOR	0.915	1
ADAM28	3q-Del	0.915	1
ARHGAP33	1p-Del	0.915	1
BRAF	12q-Amp	0.915	1
C16orf78	MTOR	0.915	1
C16orf78	3q-Del	0.915	1
C9orf171	MTOR	0.915	1
C9orf171	3q-Del	0.915	1
CARKD	MTOR	0.915	1
CARKD	3q-Del	0.915	1
CDCA8	MTOR	0.915	1
CDCA8	3q-Del	0.915	1
DPYSL4	MTOR	0.915	1
EDIL3	12q-Amp	0.915	1
F2RL1	Amp_3q26.32	0.915	1
GPR50	1p-Del	0.915	1
IFNB1	Amp_3q26.32	0.915	1
IMPA2	MTOR	0.915	1
IMPA2	3q-Del	0.915	1
INPP5E	MTOR	0.915	1
INPP5E	3q-Del	0.915	1
KCNK1	Amp_3q26.32	0.915	1
KIAA0922	17q-Amp	0.915	1
MTOR	NEK8	0.915	1
MTOR	OR10G3	0.915	1
MTOR	PDLIM4	0.915	1
MTOR	PRDX5	0.915	1
MTOR	PRODH	0.915	1
MTOR	SCYL1	0.915	1
MTOR	SLC1A7	0.915	1
MTOR	SPATA13	0.915	1
NASP	1p-Del	0.915	1
NDUFA3	Amp_3q26.32	0.915	1
NOM1	Amp_3q26.32	0.915	1
ONECUT2	Amp_3q26.32	0.915	1
OR10G3	3q-Del	0.915	1
PRODH	3q-Del	0.915	1
RALB	Amp_3q26.32	0.915	1
RCN1	Amp_3q26.32	0.915	1
RILPL1	12q-Amp	0.915	1
RILPL1	1p-Del	0.915	1
RIMBP3	12q-Amp	0.915	1
RIN1	Amp_3q26.32	0.915	1
RNF113B	Amp_3q26.32	0.915	1
RNF144A	Amp_3q26.32	0.915	1
SCYL1	3q-Del	0.915	1
SLC1A7	3q-Del	0.915	1
SLC23A1	Amp_3q26.32	0.915	1
SLC23A1	Del_3p12.2	0.915	1
SPATA13	3q-Del	0.915	1
TMEM47	Amp_3q26.32	0.915	1
ZNF438	12q-Amp	0.915	1
ZNF521	12q-Amp	0.915	1
ZNF521	1p-Del	0.915	1
ZNF814	Del_1p31.1	0.915	1
ZNHIT1	Amp_3q26.32	0.915	1
5q-Amp	7p-Amp	0.915	1
ALMS1	Amp_17q24.3	0.916	1
ARHGAP35	13q-Del	0.916	1
CSF1R	13q-Del	0.916	1
CUL3	2q-Amp	0.916	1
FZR1	Del_3p26.3	0.916	1
MET	NF2	0.916	1
NFE2L2	7p-Amp	0.916	1
NIPBL	6q-Del	0.916	1
NOM1	Del_3p21.2	0.916	1
PRKAG2	13q-Del	0.916	1
ZNF814	Amp_17q24.3	0.916	1
Amp_Xq11.2	Del_3p26.3	0.916	1
ACSF2	20q-Amp	0.917	1
ADCY8	Amp_5q35.1	0.917	1
BCLAF1	Amp_17q24.3	0.917	1
CDKN2A	Amp_17q24.3	0.917	1
DNAJA3	Amp_17q24.3	0.917	1
DNMT3A	20q-Amp	0.917	1
GPR50	6p-Del	0.917	1
KDM6A	17p-Del	0.917	1
MYF6	6p-Del	0.917	1
NASP	6p-Del	0.917	1
PCF11	SYNE1	0.917	1
RILPL1	6p-Del	0.917	1
RIMBP3	6p-Del	0.917	1
ZFYVE26	Amp_5q35.1	0.917	1
18q-Del	Del_3p26.3	0.917	1
ACSF2	FGFR3	0.918	1
ACSF2	KRAS	0.918	1
ACSF2	NOM1	0.918	1
ACSF2	NTRK3	0.918	1
ACSF2	PODXL	0.918	1
ACSF2	SLC23A1	0.918	1
ATM	Amp_5q35.1	0.918	1
CYP2C18	17p-Del	0.918	1
DNMT3A	FGFR3	0.918	1
DNMT3A	KRAS	0.918	1
DNMT3A	NOM1	0.918	1
DNMT3A	NTRK3	0.918	1
DNMT3A	PODXL	0.918	1
F2RL1	17p-Del	0.918	1
IFNB1	17p-Del	0.918	1
KCNK1	17p-Del	0.918	1
KRAS	RAI1	0.918	1
MET	3q-Del	0.918	1
NDUFA3	17p-Del	0.918	1
NFE2L2	Del_1q44	0.918	1
NKX2-1	17p-Del	0.918	1
NOM1	RAI1	0.918	1
NTRK3	RAI1	0.918	1
ONECUT2	17p-Del	0.918	1
PODXL	RAI1	0.918	1
RAI1	SLC23A1	0.918	1
RALB	17p-Del	0.918	1
RCN1	17p-Del	0.918	1
RIN1	17p-Del	0.918	1
RNF113B	17p-Del	0.918	1
RNF144A	17p-Del	0.918	1
SLC14A1	17p-Del	0.918	1
TMEM47	17p-Del	0.918	1
ZNHIT1	17p-Del	0.918	1
18p-Del	Del_3p26.3	0.918	1
ADAM28	SYNE1	0.919	1
ARHGAP33	KDM6A	0.919	1
BRAF	KDM6A	0.919	1
BRAF	NF1	0.919	1
BRAF	Del_8p23.2	0.919	1
C16orf78	SYNE1	0.919	1
C9orf171	SYNE1	0.919	1
CARKD	SYNE1	0.919	1
CDCA8	SYNE1	0.919	1
CYP2C18	5q-Amp	0.919	1
EDIL3	KDM6A	0.919	1
F2RL1	5q-Amp	0.919	1
GPR50	KDM6A	0.919	1
GPR50	NF1	0.919	1
GPR50	Del_10q23.31	0.919	1
IMPA2	SYNE1	0.919	1
KCNK1	5q-Amp	0.919	1
KDM6A	MYF6	0.919	1
KDM6A	NASP	0.919	1
KDM6A	NUDT11	0.919	1
KDM6A	RILPL1	0.919	1
KDM6A	RIMBP3	0.919	1
KDM6A	STXBP3	0.919	1
KDM6A	ZNF438	0.919	1
KDM6A	ZNF521	0.919	1
MYF6	Del_10q23.31	0.919	1
NASP	NF1	0.919	1
NASP	Del_10q23.31	0.919	1
NDUFA3	5q-Amp	0.919	1
NEK8	SYNE1	0.919	1
NF1	NUDT11	0.919	1
NF1	RILPL1	0.919	1
NF1	RIMBP3	0.919	1
NF1	STXBP3	0.919	1
NF1	ZNF438	0.919	1
NF1	ZNF521	0.919	1
NF1	Del_11q23.1	0.919	1
NKX2-1	5q-Amp	0.919	1
OR10G3	SYNE1	0.919	1
PDLIM4	SYNE1	0.919	1
PRDX5	SYNE1	0.919	1
PRODH	SYNE1	0.919	1
RALB	5q-Amp	0.919	1
RCN1	5q-Amp	0.919	1
RILPL1	Del_8p23.2	0.919	1
RILPL1	Del_10q23.31	0.919	1
RIMBP3	Del_8p23.2	0.919	1
RIN1	5q-Amp	0.919	1
RNF113B	5q-Amp	0.919	1
RNF144A	5q-Amp	0.919	1
SCYL1	SYNE1	0.919	1
SLC14A1	5q-Amp	0.919	1
SLC1A7	SYNE1	0.919	1
TMEM47	5q-Amp	0.919	1
ZNF438	Del_8p23.2	0.919	1
ZNF521	Del_8p23.2	0.919	1
ZNHIT1	5q-Amp	0.919	1
ARAP3	NF2	0.92	1
ARAP3	Del_16q23.3	0.92	1
CDK12	GLS	0.92	1
CDK12	TXNIP	0.92	1
CDK12	WASL	0.92	1
CSK	CUL3	0.92	1
CSK	NF2	0.92	1
CSK	Del_16q23.3	0.92	1
CUL3	FZR1	0.92	1
CUL3	SLC6A14	0.92	1
CUL3	TCEB1	0.92	1
CUL3	ZC3H3	0.92	1
CUL3	Amp_Xq11.2	0.92	1
CYP2C18	5p-Amp	0.92	1
CYP2C18	9q-Del	0.92	1
ENO1	NF2	0.92	1
F2RL1	5p-Amp	0.92	1
F2RL1	9q-Del	0.92	1
FAM178A	GLS	0.92	1
FAM178A	TXNIP	0.92	1
FAM178A	WASL	0.92	1
FZR1	NF2	0.92	1
FZR1	Del_16q23.3	0.92	1
GLS	TXNIP	0.92	1
GLS	WASL	0.92	1
IFNB1	9q-Del	0.92	1
KCNK1	5p-Amp	0.92	1
NDUFA3	5p-Amp	0.92	1
NF1	5q-Amp	0.92	1
NF2	SLC6A14	0.92	1
NF2	TCEB1	0.92	1
NF2	ZC3H3	0.92	1
NF2	Amp_Xq11.2	0.92	1
NKX2-1	5p-Amp	0.92	1
NKX2-1	9q-Del	0.92	1
ONECUT2	9q-Del	0.92	1
PODXL	17p-Del	0.92	1
RALB	5p-Amp	0.92	1
RALB	9q-Del	0.92	1
RCN1	5p-Amp	0.92	1
RIN1	5p-Amp	0.92	1
RIN1	9q-Del	0.92	1
RNF113B	5p-Amp	0.92	1
RNF113B	9q-Del	0.92	1
RNF144A	5p-Amp	0.92	1
RNF144A	9q-Del	0.92	1
SLC14A1	5p-Amp	0.92	1
SLC14A1	9q-Del	0.92	1
SLC6A14	Del_16q23.3	0.92	1
TCEB1	Del_16q23.3	0.92	1
TMEM47	5p-Amp	0.92	1
TMEM47	9q-Del	0.92	1
TXNIP	WASL	0.92	1
ZC3H3	Del_16q23.3	0.92	1
ZNHIT1	5p-Amp	0.92	1
ZNHIT1	9q-Del	0.92	1
5p-Amp	3p-Del	0.92	1
Amp_Xq11.2	Del_16q23.3	0.92	1
ACSF2	3q-Del	0.921	1
ARHGAP33	20p-Amp	0.921	1
BRAF	20p-Amp	0.921	1
CACNA1C	Del_2q22.1	0.921	1
CDK12	3p-Amp	0.921	1
CSF1R	Del_2q22.1	0.921	1
EDIL3	20p-Amp	0.921	1
EGFR	Del_2q22.1	0.921	1
FAM178A	3p-Amp	0.921	1
MYF6	20p-Amp	0.921	1
NASP	20p-Amp	0.921	1
NFE2L2	Del_9p23	0.921	1
NIPBL	Del_2q22.1	0.921	1
NTRK3	PBRM1	0.921	1
PTEN	18p-Del	0.921	1
RILPL1	20p-Amp	0.921	1
RIMBP3	20p-Amp	0.921	1
RIMBP3	3p-Del	0.921	1
STXBP3	20p-Amp	0.921	1
STXBP3	3p-Del	0.921	1
ZNF521	20p-Amp	0.921	1
ZNF521	3p-Del	0.921	1
Amp_2q32.1	Del_2q37.3	0.921	1
ADCY8	ARHGAP35	0.922	1
ADCY8	CSF1R	0.922	1
ADCY8	EGFR	0.922	1
ADCY8	PRKAG2	0.922	1
ADCY8	PTCH1	0.922	1
ARHGAP35	GALNT7	0.922	1
ARHGAP35	PARD6B	0.922	1
ARHGAP35	PCK1	0.922	1
ARHGAP35	SMARCB1	0.922	1
ARHGAP35	WDR52	0.922	1
ARHGAP35	ZFYVE26	0.922	1
CSF1R	GALNT7	0.922	1
CSF1R	PCK1	0.922	1
CSF1R	SMARCB1	0.922	1
CSF1R	ZFYVE26	0.922	1
CSK	Del_1p31.1	0.922	1
CYP2C18	SETD2	0.922	1
CYP2C18	9p-Del	0.922	1
EGFR	GALNT7	0.922	1
EGFR	PARD6B	0.922	1
EGFR	PCK1	0.922	1
EGFR	SMARCB1	0.922	1
EGFR	WDR52	0.922	1
EGFR	ZFYVE26	0.922	1
ENO1	Del_1p31.1	0.922	1
F2RL1	SETD2	0.922	1
F2RL1	9p-Del	0.922	1
FGFR3	5q-Amp	0.922	1
GALNT7	KIAA0922	0.922	1
GALNT7	PRKAG2	0.922	1
GALNT7	PTCH1	0.922	1
IFNB1	SETD2	0.922	1
IFNB1	9p-Del	0.922	1
KCNK1	SETD2	0.922	1
KIAA0922	PARD6B	0.922	1
KIAA0922	SMARCB1	0.922	1
KIAA0922	WDR52	0.922	1
KIAA0922	ZFYVE26	0.922	1
NDUFA3	SETD2	0.922	1
NKX2-1	SETD2	0.922	1
NKX2-1	9p-Del	0.922	1
NOM1	5q-Amp	0.922	1
NTRK3	5q-Amp	0.922	1
ONECUT2	SETD2	0.922	1
ONECUT2	9p-Del	0.922	1
PARD6B	PRKAG2	0.922	1
PARD6B	PTCH1	0.922	1
PCK1	PRKAG2	0.922	1
PCK1	PTCH1	0.922	1
PRKAG2	SMARCB1	0.922	1
PRKAG2	WDR52	0.922	1
PRKAG2	ZFYVE26	0.922	1
PTCH1	SMARCB1	0.922	1
PTCH1	WDR52	0.922	1
PTCH1	ZFYVE26	0.922	1
RALB	SETD2	0.922	1
RALB	9p-Del	0.922	1
RCN1	SETD2	0.922	1
RIN1	SETD2	0.922	1
RIN1	9p-Del	0.922	1
RNF113B	SETD2	0.922	1
RNF113B	9p-Del	0.922	1
RNF144A	9p-Del	0.922	1
SETD2	SLC14A1	0.922	1
SETD2	TMEM47	0.922	1
SETD2	ZNHIT1	0.922	1
SLC14A1	9p-Del	0.922	1
TMEM47	9p-Del	0.922	1
TP53	5q-Amp	0.922	1
TXNIP	Del_14q31.1	0.922	1
ZNHIT1	9p-Del	0.922	1
17q-Amp	21q-Del	0.922	1
ARHGAP33	20q-Amp	0.923	1
ARHGAP35	18q-Del	0.923	1
BRAF	20q-Amp	0.923	1
CUL3	16p-Amp	0.923	1
EDIL3	20q-Amp	0.923	1
F2RL1	21q-Del	0.923	1
IFNB1	21q-Del	0.923	1
KCNK1	21q-Del	0.923	1
KDM6A	9q-Del	0.923	1
MYF6	20q-Amp	0.923	1
NASP	20q-Amp	0.923	1
NDUFA3	21q-Del	0.923	1
NF1	5p-Amp	0.923	1
NKX2-1	21q-Del	0.923	1
ONECUT2	21q-Del	0.923	1
PRKAG2	18q-Del	0.923	1
RALB	21q-Del	0.923	1
RIMBP3	20q-Amp	0.923	1
RIN1	21q-Del	0.923	1
RNF113B	21q-Del	0.923	1
RNF144A	21q-Del	0.923	1
STXBP3	20q-Amp	0.923	1
TMEM47	21q-Del	0.923	1
ZNF521	20q-Amp	0.923	1
ZNHIT1	21q-Del	0.923	1
6q-Del	Del_3p21.2	0.923	1
BRAF	Del_9p21.3	0.924	1
CACNA1C	18q-Del	0.924	1
FGFR3	5p-Amp	0.924	1
GPR50	Del_9p21.3	0.924	1
NASP	Del_9p21.3	0.924	1
NOM1	5p-Amp	0.924	1
NTRK3	5p-Amp	0.924	1
PIK3CA	18q-Del	0.924	1
PODXL	9q-Del	0.924	1
RILPL1	Del_9p21.3	0.924	1
RIMBP3	Del_9p21.3	0.924	1
ZNF521	Del_9p21.3	0.924	1
ZNF814	Amp_2q32.1	0.924	1
14q-Del	Amp_Xq11.2	0.924	1
14q-Del	Del_6q26	0.924	1
ADCY8	6q-Del	0.925	1
AR	ARAP3	0.925	1
AR	CSK	0.925	1
AR	ENO1	0.925	1
AR	FZR1	0.925	1
AR	SLC6A14	0.925	1
AR	TCEB1	0.925	1
AR	ZC3H3	0.925	1
AR	2q-Amp	0.925	1
AR	Amp_Xq11.2	0.925	1
ARAP3	CACNA1C	0.925	1
ARAP3	NIPBL	0.925	1
ARAP3	PIK3CA	0.925	1
ARAP3	STAG2	0.925	1
ARHGAP33	NFE2L2	0.925	1
ARHGAP33	PCF11	0.925	1
ARID1A	ATM	0.925	1
ARID1A	FAT1	0.925	1
ARID1A	SMARCA4	0.925	1
ATM	CDKN2A	0.925	1
ATM	CXorf23	0.925	1
ATM	DNAJA3	0.925	1
ATM	ECHDC2	0.925	1
ATM	HSPA2	0.925	1
ATM	KIF16B	0.925	1
ATM	KLK10	0.925	1
ATM	PAM	0.925	1
ATM	VCL	0.925	1
ATM	ZNF532	0.925	1
BCLAF1	FGFR3	0.925	1
BCLAF1	KRAS	0.925	1
BCLAF1	NOM1	0.925	1
BCLAF1	NTRK3	0.925	1
BCLAF1	PODXL	0.925	1
BCLAF1	SLC23A1	0.925	1
BRAF	NEFH	0.925	1
BRAF	NFE2L2	0.925	1
CACNA1C	CSK	0.925	1
CACNA1C	FZR1	0.925	1
CACNA1C	SLC6A14	0.925	1
CACNA1C	TCEB1	0.925	1
CACNA1C	ZC3H3	0.925	1
CACNA1C	2q-Amp	0.925	1
CACNA1C	Amp_Xq11.2	0.925	1
CDKN2A	FAT1	0.925	1
CDKN2A	SMARCA4	0.925	1
CSK	NIPBL	0.925	1
CSK	PIK3CA	0.925	1
CSK	STAG2	0.925	1
CXorf23	FAT1	0.925	1
CXorf23	SMARCA4	0.925	1
DNAJA3	FAT1	0.925	1
DNAJA3	SMARCA4	0.925	1
ECHDC2	FAT1	0.925	1
EDIL3	NEFH	0.925	1
EDIL3	NFE2L2	0.925	1
EDIL3	PCF11	0.925	1
ENO1	NIPBL	0.925	1
ENO1	STAG2	0.925	1
EPS15L1	FGFR3	0.925	1
EPS15L1	KRAS	0.925	1
EPS15L1	NOM1	0.925	1
EPS15L1	NTRK3	0.925	1
EPS15L1	PODXL	0.925	1
EPS15L1	SLC23A1	0.925	1
FAT1	HSPA2	0.925	1
FAT1	KIF16B	0.925	1
FAT1	KLK10	0.925	1
FAT1	PAM	0.925	1
FAT1	VCL	0.925	1
FAT1	ZNF532	0.925	1
FZR1	NIPBL	0.925	1
FZR1	PIK3CA	0.925	1
FZR1	STAG2	0.925	1
GPR50	NEFH	0.925	1
GPR50	NFE2L2	0.925	1
GPR50	PCF11	0.925	1
HSPA2	SMARCA4	0.925	1
KIF16B	SMARCA4	0.925	1
KLK10	SMARCA4	0.925	1
MYF6	NEFH	0.925	1
MYF6	NFE2L2	0.925	1
MYF6	PCF11	0.925	1
NASP	NEFH	0.925	1
NASP	NFE2L2	0.925	1
NASP	PCF11	0.925	1
NEFH	NUDT11	0.925	1
NEFH	RILPL1	0.925	1
NEFH	RIMBP3	0.925	1
NEFH	STXBP3	0.925	1
NEFH	ZNF438	0.925	1
NEFH	ZNF521	0.925	1
NFE2L2	NUDT11	0.925	1
NFE2L2	RILPL1	0.925	1
NFE2L2	RIMBP3	0.925	1
NFE2L2	STXBP3	0.925	1
NFE2L2	ZNF438	0.925	1
NFE2L2	ZNF521	0.925	1
NIPBL	SLC6A14	0.925	1
NIPBL	TCEB1	0.925	1
NIPBL	ZC3H3	0.925	1
NIPBL	Amp_Xq11.2	0.925	1
NUDT11	PCF11	0.925	1
PAM	SMARCA4	0.925	1
PCF11	RILPL1	0.925	1
PCF11	RIMBP3	0.925	1
PCF11	STXBP3	0.925	1
PCF11	ZNF438	0.925	1
PCF11	ZNF521	0.925	1
PIK3CA	SLC6A14	0.925	1
PIK3CA	TCEB1	0.925	1
PIK3CA	2q-Amp	0.925	1
PIK3CA	Amp_Xq11.2	0.925	1
SMARCA4	VCL	0.925	1
SMARCA4	ZNF532	0.925	1
SMARCB1	6q-Del	0.925	1
STAG2	TCEB1	0.925	1
STAG2	ZC3H3	0.925	1
STAG2	2q-Amp	0.925	1
STAG2	Amp_Xq11.2	0.925	1
BCLAF1	1p-Del	0.926	1
FGFR3	9p-Del	0.926	1
GPR50	10q-Del	0.926	1
MYF6	10q-Del	0.926	1
NASP	10q-Del	0.926	1
NF1	SETD2	0.926	1
PODXL	9p-Del	0.926	1
RILPL1	10q-Del	0.926	1
SYNE1	Del_6q26	0.926	1
ADAM28	Del_11q23.1	0.927	1
ALMS1	3q-Amp	0.927	1
ARAP3	Amp_5q35.1	0.927	1
ARID1A	Del_2q37.3	0.927	1
C16orf78	Del_11q23.1	0.927	1
C9orf171	Del_11q23.1	0.927	1
CARKD	Del_11q23.1	0.927	1
CDCA8	Del_11q23.1	0.927	1
ENO1	Amp_5q35.1	0.927	1
IMPA2	Del_11q23.1	0.927	1
INPP5E	Del_11q23.1	0.927	1
NEFH	16q-Amp	0.927	1
NEFH	Amp_3q26.32	0.927	1
NEK8	Del_11q23.1	0.927	1
NFE2L2	16q-Amp	0.927	1
OR10G3	Del_11q23.1	0.927	1
PBRM1	Del_14q31.1	0.927	1
PDLIM4	Del_11q23.1	0.927	1
PRDX5	Del_11q23.1	0.927	1
PRODH	Del_11q23.1	0.927	1
SCYL1	Del_11q23.1	0.927	1
SLC1A7	Del_11q23.1	0.927	1
SLC6A14	Amp_5q35.1	0.927	1
SPATA13	Del_11q23.1	0.927	1
TP53	5p-Amp	0.927	1
ZC3H3	Amp_5q35.1	0.927	1
ZNF814	3q-Amp	0.927	1
16p-Amp	5q-Amp	0.927	1
ARHGAP35	VHL	0.928	1
CDK12	Amp_7q31.2	0.928	1
CYP2C18	13q-Del	0.928	1
F2RL1	3q-Amp	0.928	1
F2RL1	13q-Del	0.928	1
GLS	Amp_7q31.2	0.928	1
IFNB1	3q-Amp	0.928	1
KCNK1	3q-Amp	0.928	1
KCNK1	13q-Del	0.928	1
KRAS	21q-Del	0.928	1
NDUFA3	3q-Amp	0.928	1
NDUFA3	13q-Del	0.928	1
NKX2-1	13q-Del	0.928	1
NTRK3	21q-Del	0.928	1
ONECUT2	3q-Amp	0.928	1
ONECUT2	13q-Del	0.928	1
RALB	3q-Amp	0.928	1
RALB	13q-Del	0.928	1
RCN1	3q-Amp	0.928	1
RCN1	13q-Del	0.928	1
RIN1	3q-Amp	0.928	1
RIN1	13q-Del	0.928	1
RNF113B	3q-Amp	0.928	1
RNF113B	13q-Del	0.928	1
RNF144A	3q-Amp	0.928	1
RNF144A	13q-Del	0.928	1
SLC14A1	13q-Del	0.928	1
SLC23A1	Amp_17q24.3	0.928	1
TMEM47	3q-Amp	0.928	1
TMEM47	13q-Del	0.928	1
ZNHIT1	3q-Amp	0.928	1
ZNHIT1	13q-Del	0.928	1
ARHGAP33	Amp_7q31.2	0.929	1
BCLAF1	6p-Del	0.929	1
CDK12	Del_3p21.2	0.929	1
FAM178A	Del_3p21.2	0.929	1
GLS	Del_3p21.2	0.929	1
GPR50	Amp_7q31.2	0.929	1
KDM5C	NF1	0.929	1
NF1	PBRM1	0.929	1
NFE2L2	Del_1p36.31	0.929	1
NOM1	Del_3p26.3	0.929	1
RAI1	SYNE1	0.929	1
Del_1p36.31	Del_3p14.1	0.929	1
ALMS1	ARAP3	0.93	1
ALMS1	ENO1	0.93	1
ALMS1	FZR1	0.93	1
ALMS1	SLC6A14	0.93	1
ALMS1	ZC3H3	0.93	1
ALMS1	Amp_Xq11.2	0.93	1
ARAP3	ZNF814	0.93	1
ARHGAP35	CDK12	0.93	1
ARHGAP35	FAM178A	0.93	1
ARHGAP35	GLS	0.93	1
ARHGAP35	TXNIP	0.93	1
ARHGAP35	WASL	0.93	1
CDK12	EGFR	0.93	1
CDK12	KIAA0922	0.93	1
CDK12	PRKAG2	0.93	1
CDK12	PTCH1	0.93	1
CSF1R	FAM178A	0.93	1
CSF1R	GLS	0.93	1
CSF1R	TXNIP	0.93	1
CSF1R	WASL	0.93	1
CSK	ZNF814	0.93	1
EGFR	FAM178A	0.93	1
EGFR	GLS	0.93	1
EGFR	TXNIP	0.93	1
EGFR	WASL	0.93	1
ENO1	ZNF814	0.93	1
FAM178A	PRKAG2	0.93	1
FAM178A	PTCH1	0.93	1
FZR1	ZNF814	0.93	1
GLS	KIAA0922	0.93	1
GLS	PRKAG2	0.93	1
GLS	PTCH1	0.93	1
KIAA0922	TXNIP	0.93	1
KIAA0922	WASL	0.93	1
KIAA0922	17p-Amp	0.93	1
PRKAG2	TXNIP	0.93	1
PRKAG2	WASL	0.93	1
PTCH1	TXNIP	0.93	1
PTCH1	WASL	0.93	1
RAI1	Del_2q37.3	0.93	1
SLC6A14	ZNF814	0.93	1
TCEB1	ZNF814	0.93	1
ZC3H3	ZNF814	0.93	1
ZNF814	Amp_Xq11.2	0.93	1
Del_3p14.1	Del_11q23.1	0.93	1
ACSF2	ARHGAP33	0.931	1
ACSF2	BRAF	0.931	1
ACSF2	EDIL3	0.931	1
ACSF2	MYF6	0.931	1
ACSF2	NASP	0.931	1
ACSF2	NUDT11	0.931	1
ACSF2	RILPL1	0.931	1
ACSF2	RIMBP3	0.931	1
ACSF2	STXBP3	0.931	1
ACSF2	ZNF438	0.931	1
ACSF2	ZNF521	0.931	1
ARHGAP33	DNMT3A	0.931	1
ARHGAP33	RAI1	0.931	1
ARHGAP35	18p-Del	0.931	1
ATM	TP53	0.931	1
BCLAF1	Del_10q23.31	0.931	1
BRAF	DNMT3A	0.931	1
BRAF	RAI1	0.931	1
CYP2C18	Del_2q22.1	0.931	1
DNMT3A	EDIL3	0.931	1
DNMT3A	GPR50	0.931	1
DNMT3A	MYF6	0.931	1
DNMT3A	NASP	0.931	1
DNMT3A	NUDT11	0.931	1
DNMT3A	RILPL1	0.931	1
DNMT3A	RIMBP3	0.931	1
DNMT3A	STXBP3	0.931	1
DNMT3A	ZNF521	0.931	1
EDIL3	RAI1	0.931	1
EPS15L1	Del_8p23.2	0.931	1
F2RL1	Del_2q22.1	0.931	1
FAT1	TP53	0.931	1
IFNB1	Del_2q22.1	0.931	1
KCNK1	Del_2q22.1	0.931	1
KIAA0922	18p-Del	0.931	1
MYF6	RAI1	0.931	1
NASP	RAI1	0.931	1
NDUFA3	Del_2q22.1	0.931	1
NKX2-1	Del_2q22.1	0.931	1
NUDT11	RAI1	0.931	1
ONECUT2	Del_2q22.1	0.931	1
PRKAG2	18p-Del	0.931	1
RAI1	RILPL1	0.931	1
RAI1	STXBP3	0.931	1
RAI1	ZNF438	0.931	1
RAI1	ZNF521	0.931	1
RALB	Del_2q22.1	0.931	1
RCN1	Del_2q22.1	0.931	1
RIN1	Del_2q22.1	0.931	1
RNF113B	Del_2q22.1	0.931	1
RNF144A	Del_2q22.1	0.931	1
SLC14A1	Del_2q22.1	0.931	1
TMEM47	Del_2q22.1	0.931	1
ZNHIT1	Del_2q22.1	0.931	1
ADAM28	KDM5C	0.932	1
ADCY8	FGFR3	0.932	1
ADCY8	NOM1	0.932	1
ADCY8	NTRK3	0.932	1
ADCY8	PODXL	0.932	1
ARID1A	CDKN2A	0.932	1
ARID1A	CXorf23	0.932	1
ARID1A	DNAJA3	0.932	1
ARID1A	ECHDC2	0.932	1
ARID1A	KIF16B	0.932	1
ARID1A	KLK10	0.932	1
ARID1A	PAM	0.932	1
ARID1A	VCL	0.932	1
ARID1A	ZNF532	0.932	1
C16orf78	KDM5C	0.932	1
C9orf171	KDM5C	0.932	1
CARKD	KDM5C	0.932	1
CDCA8	KDM5C	0.932	1
CDKN2A	17q-Amp	0.932	1
CSK	6q-Del	0.932	1
CYP2C18	18q-Del	0.932	1
DNAJA3	17q-Amp	0.932	1
ENO1	6q-Del	0.932	1
F2RL1	18q-Del	0.932	1
FGFR3	GALNT7	0.932	1
FGFR3	PARD6B	0.932	1
FGFR3	PCK1	0.932	1
FGFR3	SMARCB1	0.932	1
FGFR3	WDR52	0.932	1
FGFR3	ZFYVE26	0.932	1
FZR1	6q-Del	0.932	1
GALNT7	KRAS	0.932	1
GALNT7	NOM1	0.932	1
GALNT7	PODXL	0.932	1
GALNT7	SLC23A1	0.932	1
IFNB1	18q-Del	0.932	1
IMPA2	KDM5C	0.932	1
INPP5E	KDM5C	0.932	1
KCNK1	18q-Del	0.932	1
KDM5C	NEK8	0.932	1
KDM5C	OR10G3	0.932	1
KDM5C	PDLIM4	0.932	1
KDM5C	PRDX5	0.932	1
KDM5C	PRODH	0.932	1
KDM5C	SCYL1	0.932	1
KDM5C	SLC1A7	0.932	1
KRAS	PARD6B	0.932	1
KRAS	PCK1	0.932	1
KRAS	SMARCB1	0.932	1
KRAS	WDR52	0.932	1
KRAS	ZFYVE26	0.932	1
MYF6	Del_2q37.3	0.932	1
NASP	Del_2q37.3	0.932	1
NKX2-1	18q-Del	0.932	1
NOM1	PARD6B	0.932	1
NOM1	PCK1	0.932	1
NOM1	SMARCB1	0.932	1
NOM1	WDR52	0.932	1
NOM1	ZFYVE26	0.932	1
NTRK3	PARD6B	0.932	1
NTRK3	PCK1	0.932	1
NTRK3	WDR52	0.932	1
NTRK3	ZFYVE26	0.932	1
ONECUT2	18q-Del	0.932	1
PARD6B	PODXL	0.932	1
PARD6B	SLC23A1	0.932	1
PCK1	PODXL	0.932	1
PCK1	SLC23A1	0.932	1
PODXL	SMARCB1	0.932	1
PODXL	WDR52	0.932	1
PODXL	ZFYVE26	0.932	1
PTEN	Del_13q13.2	0.932	1
RAI1	16p-Amp	0.932	1
RALB	18q-Del	0.932	1
RCN1	18q-Del	0.932	1
RIN1	18q-Del	0.932	1
RNF113B	18q-Del	0.932	1
RNF144A	18q-Del	0.932	1
SLC14A1	18q-Del	0.932	1
SLC23A1	SMARCB1	0.932	1
SLC23A1	WDR52	0.932	1
SLC23A1	ZFYVE26	0.932	1
SLC6A14	6q-Del	0.932	1
STXBP3	Del_2q37.3	0.932	1
TMEM47	18q-Del	0.932	1
ZNHIT1	18q-Del	0.932	1
5p-Amp	Amp_3q26.32	0.932	1
ATM	9q-Del	0.933	1
BCLAF1	3q-Del	0.933	1
DNMT3A	Amp_7q31.2	0.933	1
EPS15L1	3q-Del	0.933	1
GALNT7	TP53	0.933	1
RAI1	Amp_7q31.2	0.933	1
SMARCB1	TP53	0.933	1
TP53	WDR52	0.933	1
3q-Del	Del_13q13.2	0.933	1
ADAM28	PTEN	0.934	1
ADAM28	Amp_2q32.1	0.934	1
AR	18p-Del	0.934	1
ARHGAP33	7q-Amp	0.934	1
C16orf78	PTEN	0.934	1
C16orf78	Amp_2q32.1	0.934	1
C9orf171	PTEN	0.934	1
C9orf171	Amp_2q32.1	0.934	1
CACNA1C	18p-Del	0.934	1
CACNA1C	Del_3p21.2	0.934	1
CARKD	PTEN	0.934	1
CARKD	Amp_2q32.1	0.934	1
CDCA8	PTEN	0.934	1
CDK12	Del_1p31.1	0.934	1
DPYSL4	PTEN	0.934	1
DPYSL4	Amp_2q32.1	0.934	1
FAM178A	Del_1p31.1	0.934	1
GPR50	7q-Amp	0.934	1
IMPA2	PTEN	0.934	1
INPP5E	PTEN	0.934	1
INPP5E	Amp_2q32.1	0.934	1
NEK8	PTEN	0.934	1
NEK8	Amp_2q32.1	0.934	1
NF2	Del_6q26	0.934	1
NIPBL	12p-Amp	0.934	1
OR10G3	PTEN	0.934	1
OR10G3	Amp_2q32.1	0.934	1
PDLIM4	PTEN	0.934	1
PDLIM4	Amp_2q32.1	0.934	1
PIK3CA	18p-Del	0.934	1
PRDX5	PTEN	0.934	1
PRDX5	Amp_2q32.1	0.934	1
PRODH	PTEN	0.934	1
PRODH	Amp_2q32.1	0.934	1
PTEN	SCYL1	0.934	1
PTEN	SLC1A7	0.934	1
PTEN	SPATA13	0.934	1
SCYL1	Amp_2q32.1	0.934	1
SLC1A7	Amp_2q32.1	0.934	1
SPATA13	Amp_2q32.1	0.934	1
ZNF814	2q-Amp	0.934	1
3p-Amp	Del_16q23.3	0.934	1
5p-Amp	14q-Del	0.934	1
17p-Del	Del_4q34.3	0.934	1
ARAP3	KDM6A	0.935	1
ARAP3	NF1	0.935	1
ARHGAP33	7p-Amp	0.935	1
ARHGAP33	Del_1q44	0.935	1
CDK12	7q-Amp	0.935	1
CSF1R	Del_6q26	0.935	1
CSK	KDM6A	0.935	1
CSK	NF1	0.935	1
ENO1	KDM6A	0.935	1
ENO1	NF1	0.935	1
FZR1	KDM6A	0.935	1
FZR1	NF1	0.935	1
GLS	7q-Amp	0.935	1
GPR50	7p-Amp	0.935	1
GPR50	Del_1q44	0.935	1
KDM6A	SLC6A14	0.935	1
KDM6A	TCEB1	0.935	1
KDM6A	ZC3H3	0.935	1
KDM6A	Amp_Xq11.2	0.935	1
MYF6	Del_1q44	0.935	1
NASP	Del_1q44	0.935	1
NF1	SLC6A14	0.935	1
NF1	TCEB1	0.935	1
NF1	ZC3H3	0.935	1
NF1	Amp_Xq11.2	0.935	1
RILPL1	Del_1q44	0.935	1
SETD2	Del_1p36.31	0.935	1
ARID1A	8p-Del	0.936	1
ARID1A	Del_9p23	0.936	1
ATM	9p-Del	0.936	1
C16orf78	VHL	0.936	1
CDK12	7p-Amp	0.936	1
CYP2C18	18p-Del	0.936	1
F2RL1	18p-Del	0.936	1
FAT1	SETD2	0.936	1
GLS	7p-Amp	0.936	1
IFNB1	18p-Del	0.936	1
IMPA2	VHL	0.936	1
KCNK1	18p-Del	0.936	1
NKX2-1	18p-Del	0.936	1
ONECUT2	18p-Del	0.936	1
PDLIM4	VHL	0.936	1
PRDX5	VHL	0.936	1
RALB	18p-Del	0.936	1
RCN1	18p-Del	0.936	1
RIN1	18p-Del	0.936	1
RNF113B	18p-Del	0.936	1
RNF144A	18p-Del	0.936	1
SLC14A1	18p-Del	0.936	1
SYNE1	Del_3p14.1	0.936	1
TMEM47	18p-Del	0.936	1
TXNIP	14q-Del	0.936	1
ZNHIT1	18p-Del	0.936	1
ARHGAP33	BCLAF1	0.937	1
ARHGAP33	EPS15L1	0.937	1
ARHGAP33	Del_9p23	0.937	1
BCLAF1	BRAF	0.937	1
BCLAF1	EDIL3	0.937	1
BCLAF1	GPR50	0.937	1
BCLAF1	MYF6	0.937	1
BCLAF1	NASP	0.937	1
BCLAF1	NUDT11	0.937	1
BCLAF1	RILPL1	0.937	1
BCLAF1	RIMBP3	0.937	1
BCLAF1	ZNF438	0.937	1
BCLAF1	ZNF521	0.937	1
BRAF	EPS15L1	0.937	1
BRAF	8p-Del	0.937	1
EDIL3	EPS15L1	0.937	1
EPS15L1	GPR50	0.937	1
EPS15L1	MYF6	0.937	1
EPS15L1	NASP	0.937	1
EPS15L1	NUDT11	0.937	1
EPS15L1	RIMBP3	0.937	1
EPS15L1	STXBP3	0.937	1
EPS15L1	ZNF438	0.937	1
EPS15L1	ZNF521	0.937	1
FGFR3	3q-Amp	0.937	1
KDM6A	Amp_17q24.3	0.937	1
RILPL1	8p-Del	0.937	1
RILPL1	Del_9p23	0.937	1
RIMBP3	8p-Del	0.937	1
RIMBP3	Del_9p23	0.937	1
SLC23A1	3q-Amp	0.937	1
SYNE1	Del_2q22.1	0.937	1
TP53	Del_9p21.3	0.937	1
ZNF521	8p-Del	0.937	1
ZNF521	Del_9p23	0.937	1
ZNF521	Del_13q13.2	0.937	1
ZNF814	18q-Del	0.937	1
KDM5C	NFE2L2	0.938	1
5q-Amp	Del_4q34.3	0.938	1
5q-Amp	Del_14q31.1	0.938	1
ADAM28	MET	0.939	1
ADAM28	2q-Amp	0.939	1
ARHGAP35	CSF1R	0.939	1
ARHGAP35	EGFR	0.939	1
ARHGAP35	KIAA0922	0.939	1
ARHGAP35	PRKAG2	0.939	1
ARHGAP35	PTCH1	0.939	1
ATM	Del_16q23.3	0.939	1
BCLAF1	10q-Del	0.939	1
C16orf78	MET	0.939	1
C16orf78	2q-Amp	0.939	1
C9orf171	MET	0.939	1
C9orf171	2q-Amp	0.939	1
CARKD	MET	0.939	1
CARKD	2q-Amp	0.939	1
CDCA8	MET	0.939	1
CDK12	Amp_5q35.1	0.939	1
CSF1R	EGFR	0.939	1
CSF1R	KIAA0922	0.939	1
CSF1R	PRKAG2	0.939	1
CSF1R	PTCH1	0.939	1
CUL3	FAT1	0.939	1
CUL3	SMARCA4	0.939	1
DPYSL4	MET	0.939	1
DPYSL4	2q-Amp	0.939	1
EGFR	KIAA0922	0.939	1
EGFR	PRKAG2	0.939	1
EGFR	PTCH1	0.939	1
GALNT7	12p-Amp	0.939	1
GALNT7	Del_4q34.3	0.939	1
IMPA2	MET	0.939	1
INPP5E	MET	0.939	1
INPP5E	2q-Amp	0.939	1
KIAA0922	PRKAG2	0.939	1
KIAA0922	PTCH1	0.939	1
MET	NEK8	0.939	1
MET	OR10G3	0.939	1
MET	PDLIM4	0.939	1
MET	PRDX5	0.939	1
MET	PRODH	0.939	1
MET	SCYL1	0.939	1
MET	SLC1A7	0.939	1
MET	SPATA13	0.939	1
NEK8	2q-Amp	0.939	1
NF2	SMARCA4	0.939	1
OR10G3	2q-Amp	0.939	1
PDLIM4	2q-Amp	0.939	1
PRDX5	2q-Amp	0.939	1
PRKAG2	PTCH1	0.939	1
PRODH	2q-Amp	0.939	1
SCYL1	2q-Amp	0.939	1
SLC1A7	2q-Amp	0.939	1
SMARCB1	12p-Amp	0.939	1
SPATA13	2q-Amp	0.939	1
VCL	16p-Amp	0.939	1
WDR52	12p-Amp	0.939	1
Del_1q44	Del_14q31.1	0.939	1
ARAP3	NEFH	0.94	1
ARAP3	NFE2L2	0.94	1
ARAP3	PCF11	0.94	1
BCLAF1	SYNE1	0.94	1
CDK12	FGFR3	0.94	1
CDK12	KRAS	0.94	1
CDK12	NOM1	0.94	1
CDK12	NTRK3	0.94	1
CDK12	PODXL	0.94	1
CDK12	SLC23A1	0.94	1
CDKN2A	CUL3	0.94	1
CDKN2A	NF2	0.94	1
CDKN2A	Del_16q23.3	0.94	1
CSK	NEFH	0.94	1
CSK	NFE2L2	0.94	1
CSK	PCF11	0.94	1
CUL3	CXorf23	0.94	1
CUL3	DNAJA3	0.94	1
CUL3	ECHDC2	0.94	1
CUL3	HSPA2	0.94	1
CUL3	KLK10	0.94	1
CUL3	VCL	0.94	1
CUL3	ZNF532	0.94	1
CUL3	16q-Amp	0.94	1
CXorf23	NF2	0.94	1
CXorf23	Del_16q23.3	0.94	1
DNAJA3	NF2	0.94	1
DNAJA3	Del_16q23.3	0.94	1
DNMT3A	7q-Amp	0.94	1
ECHDC2	NF2	0.94	1
ECHDC2	Del_16q23.3	0.94	1
ENO1	NEFH	0.94	1
ENO1	NFE2L2	0.94	1
ENO1	PCF11	0.94	1
EPS15L1	SYNE1	0.94	1
F2RL1	3p-Amp	0.94	1
FAM178A	FGFR3	0.94	1
FAM178A	KRAS	0.94	1
FAM178A	NOM1	0.94	1
FAM178A	NTRK3	0.94	1
FAM178A	PODXL	0.94	1
FAM178A	SLC23A1	0.94	1
FGFR3	GLS	0.94	1
FGFR3	WASL	0.94	1
FZR1	NEFH	0.94	1
FZR1	NFE2L2	0.94	1
FZR1	PCF11	0.94	1
GLS	KRAS	0.94	1
GLS	NOM1	0.94	1
GLS	NTRK3	0.94	1
GLS	PODXL	0.94	1
GLS	SLC23A1	0.94	1
GPR50	Amp_3q26.32	0.94	1
HSPA2	NF2	0.94	1
HSPA2	Del_16q23.3	0.94	1
IFNB1	3p-Amp	0.94	1
KCNK1	3p-Amp	0.94	1
KDM6A	3q-Amp	0.94	1
KIF16B	NF2	0.94	1
KIF16B	Del_16q23.3	0.94	1
KLK10	NF2	0.94	1
KLK10	Del_16q23.3	0.94	1
KRAS	TXNIP	0.94	1
KRAS	WASL	0.94	1
NDUFA3	3p-Amp	0.94	1
NEFH	SLC6A14	0.94	1
NEFH	TCEB1	0.94	1
NEFH	ZC3H3	0.94	1
NEFH	Amp_Xq11.2	0.94	1
NF1	3q-Amp	0.94	1
NF2	PAM	0.94	1
NF2	VCL	0.94	1
NF2	ZNF532	0.94	1
NFE2L2	SLC6A14	0.94	1
NFE2L2	TCEB1	0.94	1
NFE2L2	ZC3H3	0.94	1
NFE2L2	9p-Del	0.94	1
NFE2L2	Amp_Xq11.2	0.94	1
NIPBL	16p-Amp	0.94	1
NOM1	TXNIP	0.94	1
NOM1	WASL	0.94	1
NTRK3	TXNIP	0.94	1
ONECUT2	3p-Amp	0.94	1
PAM	Del_16q23.3	0.94	1
PCF11	SLC6A14	0.94	1
PCF11	TCEB1	0.94	1
PCF11	ZC3H3	0.94	1
PCF11	Amp_Xq11.2	0.94	1
PODXL	TXNIP	0.94	1
PODXL	WASL	0.94	1
PRKAG2	Del_1p36.31	0.94	1
RAI1	7q-Amp	0.94	1
RAI1	Del_6q26	0.94	1
RAI1	Del_11q23.1	0.94	1
RALB	3p-Amp	0.94	1
RCN1	3p-Amp	0.94	1
RILPL1	Amp_3q26.32	0.94	1
RIMBP3	Amp_3q26.32	0.94	1
RIN1	3p-Amp	0.94	1
RNF113B	3p-Amp	0.94	1
RNF144A	3p-Amp	0.94	1
SLC23A1	TXNIP	0.94	1
SLC23A1	WASL	0.94	1
SMARCA4	Del_4q34.3	0.94	1
TMEM47	3p-Amp	0.94	1
VCL	Del_16q23.3	0.94	1
ZNF532	Del_16q23.3	0.94	1
ZNHIT1	3p-Amp	0.94	1
12p-Amp	5q-Amp	0.94	1
Del_8p23.2	Del_11q23.1	0.94	1
BCLAF1	17q-Amp	0.941	1
CDCA8	Del_3p14.1	0.941	1
DNAJA3	17p-Amp	0.941	1
DNMT3A	7p-Amp	0.941	1
DPYSL4	Del_3p14.1	0.941	1
IMPA2	Del_3p14.1	0.941	1
INPP5E	Del_3p14.1	0.941	1
NEK8	Del_3p14.1	0.941	1
NTRK3	Del_2q22.1	0.941	1
OR10G3	Del_3p14.1	0.941	1
PDLIM4	Del_3p14.1	0.941	1
PODXL	Del_2q22.1	0.941	1
PRDX5	Del_3p14.1	0.941	1
RAI1	7p-Amp	0.941	1
SYNE1	18q-Del	0.941	1
CDK12	Del_3p26.3	0.942	1
CUL3	Del_1p36.31	0.942	1
ENO1	12p-Amp	0.942	1
FZR1	12p-Amp	0.942	1
MET	NF1	0.942	1
NEFH	Amp_2q32.1	0.942	1
NFE2L2	PTEN	0.942	1
ZC3H3	12p-Amp	0.942	1
12p-Amp	Amp_Xq11.2	0.942	1
2q-Amp	Amp_5q35.1	0.942	1
ADCY8	ARHGAP33	0.943	1
ADCY8	BRAF	0.943	1
ADCY8	EDIL3	0.943	1
ADCY8	GPR50	0.943	1
ADCY8	MYF6	0.943	1
ADCY8	NASP	0.943	1
ADCY8	NUDT11	0.943	1
ADCY8	RILPL1	0.943	1
ADCY8	RIMBP3	0.943	1
ADCY8	STXBP3	0.943	1
ADCY8	ZNF438	0.943	1
ADCY8	ZNF521	0.943	1
AR	CDKN2A	0.943	1
AR	CXorf23	0.943	1
AR	DNAJA3	0.943	1
AR	ECHDC2	0.943	1
AR	HSPA2	0.943	1
AR	KIF16B	0.943	1
AR	KLK10	0.943	1
AR	PAM	0.943	1
AR	VCL	0.943	1
AR	ZNF532	0.943	1
ARHGAP33	PARD6B	0.943	1
ARHGAP33	PCK1	0.943	1
ARHGAP33	WDR52	0.943	1
ARHGAP33	ZFYVE26	0.943	1
ARHGAP33	17p-Del	0.943	1
BRAF	GALNT7	0.943	1
BRAF	PARD6B	0.943	1
BRAF	PCK1	0.943	1
BRAF	SMARCB1	0.943	1
BRAF	WDR52	0.943	1
BRAF	ZFYVE26	0.943	1
CACNA1C	CDKN2A	0.943	1
CACNA1C	CXorf23	0.943	1
CACNA1C	DNAJA3	0.943	1
CACNA1C	ECHDC2	0.943	1
CACNA1C	HSPA2	0.943	1
CACNA1C	KIF16B	0.943	1
CACNA1C	KLK10	0.943	1
CACNA1C	PAM	0.943	1
CACNA1C	VCL	0.943	1
CACNA1C	ZNF532	0.943	1
CDKN2A	NIPBL	0.943	1
CDKN2A	PIK3CA	0.943	1
CDKN2A	STAG2	0.943	1
CXorf23	NIPBL	0.943	1
CXorf23	PIK3CA	0.943	1
CXorf23	STAG2	0.943	1
DNAJA3	PIK3CA	0.943	1
DNAJA3	STAG2	0.943	1
ECHDC2	NIPBL	0.943	1
ECHDC2	PIK3CA	0.943	1
ECHDC2	STAG2	0.943	1
EDIL3	GALNT7	0.943	1
EDIL3	PARD6B	0.943	1
EDIL3	PCK1	0.943	1
EDIL3	SMARCB1	0.943	1
EDIL3	WDR52	0.943	1
EDIL3	ZFYVE26	0.943	1
GALNT7	GPR50	0.943	1
GALNT7	MYF6	0.943	1
GALNT7	NASP	0.943	1
GALNT7	NUDT11	0.943	1
GALNT7	RILPL1	0.943	1
GALNT7	RIMBP3	0.943	1
GALNT7	STXBP3	0.943	1
GALNT7	ZNF438	0.943	1
GALNT7	ZNF521	0.943	1
GPR50	PARD6B	0.943	1
GPR50	PCK1	0.943	1
GPR50	SMARCB1	0.943	1
GPR50	WDR52	0.943	1
GPR50	17p-Del	0.943	1
HSPA2	NIPBL	0.943	1
HSPA2	PIK3CA	0.943	1
HSPA2	STAG2	0.943	1
KIF16B	NIPBL	0.943	1
KIF16B	STAG2	0.943	1
KLK10	NIPBL	0.943	1
KLK10	PIK3CA	0.943	1
KLK10	STAG2	0.943	1
MYF6	PARD6B	0.943	1
MYF6	PCK1	0.943	1
MYF6	SMARCB1	0.943	1
MYF6	WDR52	0.943	1
MYF6	ZFYVE26	0.943	1
MYF6	17p-Del	0.943	1
NASP	PARD6B	0.943	1
NASP	PCK1	0.943	1
NASP	SMARCB1	0.943	1
NASP	WDR52	0.943	1
NASP	ZFYVE26	0.943	1
NASP	17p-Del	0.943	1
NEFH	Del_3p12.2	0.943	1
NIPBL	PAM	0.943	1
NIPBL	VCL	0.943	1
NIPBL	ZNF532	0.943	1
NOM1	18q-Del	0.943	1
NTRK3	18q-Del	0.943	1
NUDT11	PARD6B	0.943	1
NUDT11	PCK1	0.943	1
NUDT11	SMARCB1	0.943	1
NUDT11	WDR52	0.943	1
NUDT11	ZFYVE26	0.943	1
PAM	PIK3CA	0.943	1
PAM	STAG2	0.943	1
PARD6B	RILPL1	0.943	1
PARD6B	RIMBP3	0.943	1
PARD6B	STXBP3	0.943	1
PARD6B	ZNF438	0.943	1
PARD6B	ZNF521	0.943	1
PCK1	RILPL1	0.943	1
PCK1	RIMBP3	0.943	1
PCK1	STXBP3	0.943	1
PCK1	ZNF438	0.943	1
PCK1	ZNF521	0.943	1
PIK3CA	VCL	0.943	1
PIK3CA	ZNF532	0.943	1
PODXL	18q-Del	0.943	1
RILPL1	SMARCB1	0.943	1
RILPL1	WDR52	0.943	1
RILPL1	ZFYVE26	0.943	1
RILPL1	17p-Del	0.943	1
RIMBP3	SMARCB1	0.943	1
RIMBP3	WDR52	0.943	1
RIMBP3	ZFYVE26	0.943	1
RIMBP3	17p-Del	0.943	1
SMARCB1	STXBP3	0.943	1
SMARCB1	ZNF438	0.943	1
SMARCB1	ZNF521	0.943	1
STAG2	VCL	0.943	1
STAG2	ZNF532	0.943	1
STXBP3	WDR52	0.943	1
STXBP3	ZFYVE26	0.943	1
WDR52	ZNF438	0.943	1
WDR52	ZNF521	0.943	1
ZFYVE26	ZNF438	0.943	1
ZFYVE26	ZNF521	0.943	1
21q-Del	Amp_3q26.32	0.943	1
AR	3p-Amp	0.944	1
CACNA1C	3p-Amp	0.944	1
KDM5C	5p-Amp	0.944	1
KDM5C	Del_14q31.1	0.944	1
KIF16B	Del_6q26	0.944	1
KLK10	Del_6q26	0.944	1
MTOR	Del_3p26.3	0.944	1
NIPBL	6p-Del	0.944	1
PARD6B	1p-Del	0.944	1
WDR52	12q-Amp	0.944	1
WDR52	1p-Del	0.944	1
ZNF532	Del_6q26	0.944	1
ACSF2	ARAP3	0.945	1
ACSF2	CSK	0.945	1
ACSF2	ENO1	0.945	1
ACSF2	FZR1	0.945	1
ACSF2	SLC6A14	0.945	1
ACSF2	TCEB1	0.945	1
ACSF2	ZC3H3	0.945	1
ACSF2	Amp_Xq11.2	0.945	1
ADCY8	3q-Del	0.945	1
ARAP3	DNMT3A	0.945	1
ARAP3	RAI1	0.945	1
CSK	DNMT3A	0.945	1
CSK	RAI1	0.945	1
CSK	1p-Del	0.945	1
DNMT3A	ENO1	0.945	1
DNMT3A	FZR1	0.945	1
DNMT3A	SLC6A14	0.945	1
DNMT3A	TCEB1	0.945	1
DNMT3A	ZC3H3	0.945	1
DNMT3A	Amp_Xq11.2	0.945	1
EDIL3	5q-Amp	0.945	1
ENO1	RAI1	0.945	1
ENO1	12q-Amp	0.945	1
ENO1	1p-Del	0.945	1
FZR1	RAI1	0.945	1
FZR1	12q-Amp	0.945	1
GALNT7	3q-Del	0.945	1
GPR50	5q-Amp	0.945	1
MET	Del_11q23.1	0.945	1
MTOR	SMARCB1	0.945	1
MYF6	5q-Amp	0.945	1
NASP	5q-Amp	0.945	1
NF1	Del_2q22.1	0.945	1
PARD6B	3q-Del	0.945	1
RAI1	SLC6A14	0.945	1
RAI1	ZC3H3	0.945	1
RAI1	16q-Amp	0.945	1
RAI1	Amp_Xq11.2	0.945	1
SLC23A1	17q-Amp	0.945	1
SLC6A14	1p-Del	0.945	1
WDR52	3q-Del	0.945	1
ZC3H3	12q-Amp	0.945	1
ZC3H3	1p-Del	0.945	1
12q-Amp	Amp_Xq11.2	0.945	1
16p-Amp	Del_11q23.1	0.945	1
14q-Del	Amp_5q35.1	0.945	1
ATM	CACNA1C	0.946	1
CACNA1C	FAT1	0.946	1
CDK12	TP53	0.946	1
FAT1	NIPBL	0.946	1
FAT1	PIK3CA	0.946	1
GLS	TP53	0.946	1
NIPBL	Del_10q23.31	0.946	1
PRKAG2	Del_14q31.1	0.946	1
SMARCB1	6p-Del	0.946	1
TP53	WASL	0.946	1
TXNIP	6q-Del	0.946	1
20q-Amp	Del_11q23.1	0.946	1
ALMS1	CDKN2A	0.947	1
ALMS1	CXorf23	0.947	1
ALMS1	DNAJA3	0.947	1
ALMS1	ECHDC2	0.947	1
ALMS1	HSPA2	0.947	1
ALMS1	KIF16B	0.947	1
ALMS1	KLK10	0.947	1
ALMS1	PAM	0.947	1
ALMS1	VCL	0.947	1
ALMS1	ZNF532	0.947	1
ARHGAP33	9q-Del	0.947	1
ARHGAP35	FGFR3	0.947	1
ARHGAP35	KRAS	0.947	1
ARHGAP35	NOM1	0.947	1
ARHGAP35	NTRK3	0.947	1
ARHGAP35	PODXL	0.947	1
CDKN2A	ZNF814	0.947	1
CSF1R	FGFR3	0.947	1
CSF1R	KRAS	0.947	1
CSF1R	NOM1	0.947	1
CSF1R	NTRK3	0.947	1
CSF1R	PODXL	0.947	1
CSF1R	SLC23A1	0.947	1
CSK	6p-Del	0.947	1
CXorf23	ZNF814	0.947	1
DNAJA3	ZNF814	0.947	1
ECHDC2	ZNF814	0.947	1
EDIL3	5p-Amp	0.947	1
EGFR	FGFR3	0.947	1
EGFR	KRAS	0.947	1
EGFR	NOM1	0.947	1
EGFR	NTRK3	0.947	1
EGFR	PODXL	0.947	1
EGFR	SLC23A1	0.947	1
ENO1	6p-Del	0.947	1
FGFR3	KIAA0922	0.947	1
FGFR3	PRKAG2	0.947	1
FGFR3	PTCH1	0.947	1
GPR50	5p-Amp	0.947	1
HSPA2	ZNF814	0.947	1
KIAA0922	KRAS	0.947	1
KIAA0922	NOM1	0.947	1
KIAA0922	PODXL	0.947	1
KIAA0922	SLC23A1	0.947	1
KIF16B	ZNF814	0.947	1
KLK10	ZNF814	0.947	1
KRAS	PTCH1	0.947	1
MYF6	5p-Amp	0.947	1
NASP	5p-Amp	0.947	1
NASP	9q-Del	0.947	1
NOM1	PRKAG2	0.947	1
NOM1	PTCH1	0.947	1
NTRK3	PRKAG2	0.947	1
NTRK3	PTCH1	0.947	1
NUDT11	5p-Amp	0.947	1
PAM	ZNF814	0.947	1
PODXL	PRKAG2	0.947	1
PODXL	PTCH1	0.947	1
PRKAG2	SLC23A1	0.947	1
PTCH1	SLC23A1	0.947	1
RILPL1	9q-Del	0.947	1
RIMBP3	9q-Del	0.947	1
SLC6A14	6p-Del	0.947	1
VCL	16q-Amp	0.947	1
ZNF521	9q-Del	0.947	1
ZNF532	ZNF814	0.947	1
16p-Amp	Amp_5q35.1	0.947	1
ACSF2	KDM5C	0.948	1
ACSF2	5q-Amp	0.948	1
ARAP3	Del_8p23.2	0.948	1
ARHGAP33	9p-Del	0.948	1
CSK	VHL	0.948	1
CSK	Del_10q23.31	0.948	1
ENO1	Del_8p23.2	0.948	1
KDM5C	RAI1	0.948	1
KIF16B	Del_1p36.31	0.948	1
MYF6	SETD2	0.948	1
NASP	9p-Del	0.948	1
RILPL1	SETD2	0.948	1
RILPL1	9p-Del	0.948	1
RIMBP3	9p-Del	0.948	1
SLC6A14	Del_10q23.31	0.948	1
SMARCA4	3q-Del	0.948	1
TCEB1	Del_8p23.2	0.948	1
WDR52	Del_10q23.31	0.948	1
ZC3H3	Del_8p23.2	0.948	1
ZC3H3	Del_10q23.31	0.948	1
ZNF521	9p-Del	0.948	1
ZNF814	12p-Amp	0.948	1
18p-Del	Del_10q23.31	0.948	1
3p-Del	6q-Del	0.948	1
Amp_Xq11.2	Del_10q23.31	0.948	1
ADAM28	ATM	0.949	1
ADAM28	FAT1	0.949	1
ADAM28	SMARCA4	0.949	1
ATM	C16orf78	0.949	1
ATM	C9orf171	0.949	1
ATM	CARKD	0.949	1
ATM	CDCA8	0.949	1
ATM	DPYSL4	0.949	1
ATM	IMPA2	0.949	1
ATM	INPP5E	0.949	1
ATM	NEK8	0.949	1
ATM	OR10G3	0.949	1
ATM	PRDX5	0.949	1
ATM	SCYL1	0.949	1
ATM	SPATA13	0.949	1
BCLAF1	Del_1q44	0.949	1
C16orf78	FAT1	0.949	1
C16orf78	SMARCA4	0.949	1
C16orf78	3p-Del	0.949	1
C9orf171	SMARCA4	0.949	1
CARKD	FAT1	0.949	1
CARKD	SMARCA4	0.949	1
CARKD	3p-Del	0.949	1
CDCA8	FAT1	0.949	1
CDCA8	SMARCA4	0.949	1
CDCA8	3p-Del	0.949	1
DPYSL4	FAT1	0.949	1
DPYSL4	SMARCA4	0.949	1
DPYSL4	3p-Del	0.949	1
ENO1	20p-Amp	0.949	1
FAT1	IMPA2	0.949	1
FAT1	INPP5E	0.949	1
FAT1	NEK8	0.949	1
FAT1	OR10G3	0.949	1
FAT1	PDLIM4	0.949	1
FAT1	PRDX5	0.949	1
FAT1	PRODH	0.949	1
FAT1	SCYL1	0.949	1
FAT1	SLC1A7	0.949	1
FAT1	SPATA13	0.949	1
IMPA2	SMARCA4	0.949	1
INPP5E	SMARCA4	0.949	1
INPP5E	3p-Del	0.949	1
NEK8	3p-Del	0.949	1
NFE2L2	Del_1p31.1	0.949	1
NIPBL	Del_6q26	0.949	1
NOM1	18p-Del	0.949	1
NTRK3	18p-Del	0.949	1
OR10G3	SMARCA4	0.949	1
PDLIM4	SMARCA4	0.949	1
PDLIM4	3p-Del	0.949	1
PRDX5	3p-Del	0.949	1
PRODH	SMARCA4	0.949	1
SCYL1	SMARCA4	0.949	1
SLC1A7	SMARCA4	0.949	1
SMARCA4	SPATA13	0.949	1
SYNE1	Del_14q31.1	0.949	1
ZC3H3	20p-Amp	0.949	1
ACSF2	5p-Amp	0.95	1
ARAP3	BCLAF1	0.95	1
ARAP3	EPS15L1	0.95	1
ARHGAP33	CDK12	0.95	1
ARHGAP33	GLS	0.95	1
ARHGAP33	TXNIP	0.95	1
BCLAF1	CSK	0.95	1
BCLAF1	ENO1	0.95	1
BCLAF1	FZR1	0.95	1
BCLAF1	SLC6A14	0.95	1
BCLAF1	TCEB1	0.95	1
BCLAF1	ZC3H3	0.95	1
BCLAF1	Amp_Xq11.2	0.95	1
BRAF	CDK12	0.95	1
BRAF	FAM178A	0.95	1
BRAF	GLS	0.95	1
BRAF	TXNIP	0.95	1
CDK12	EDIL3	0.95	1
CDK12	GPR50	0.95	1
CDK12	MYF6	0.95	1
CDK12	NASP	0.95	1
CDK12	NUDT11	0.95	1
CDK12	RILPL1	0.95	1
CDK12	RIMBP3	0.95	1
CDK12	STXBP3	0.95	1
CDK12	ZNF438	0.95	1
CDK12	ZNF521	0.95	1
CSK	EPS15L1	0.95	1
CUL3	Del_14q31.1	0.95	1
EDIL3	FAM178A	0.95	1
EDIL3	GLS	0.95	1
EDIL3	TXNIP	0.95	1
EDIL3	WASL	0.95	1
EDIL3	21q-Del	0.95	1
ENO1	EPS15L1	0.95	1
ENO1	20q-Amp	0.95	1
EPS15L1	FZR1	0.95	1
EPS15L1	SLC6A14	0.95	1
EPS15L1	TCEB1	0.95	1
EPS15L1	ZC3H3	0.95	1
EPS15L1	Amp_Xq11.2	0.95	1
FAM178A	GPR50	0.95	1
FAM178A	MYF6	0.95	1
FAM178A	NASP	0.95	1
FAM178A	NUDT11	0.95	1
FAM178A	RILPL1	0.95	1
FAM178A	RIMBP3	0.95	1
FAM178A	STXBP3	0.95	1
FAM178A	ZNF438	0.95	1
FAM178A	ZNF521	0.95	1
GLS	MYF6	0.95	1
GLS	NASP	0.95	1
GLS	NUDT11	0.95	1
GLS	RILPL1	0.95	1
GLS	RIMBP3	0.95	1
GLS	STXBP3	0.95	1
GLS	ZNF521	0.95	1
GPR50	TXNIP	0.95	1
GPR50	WASL	0.95	1
GPR50	21q-Del	0.95	1
MYF6	TXNIP	0.95	1
MYF6	WASL	0.95	1
NASP	TXNIP	0.95	1
NASP	WASL	0.95	1
NASP	21q-Del	0.95	1
NEFH	2q-Amp	0.95	1
NUDT11	TXNIP	0.95	1
NUDT11	WASL	0.95	1
PCK1	20p-Amp	0.95	1
RILPL1	TXNIP	0.95	1
RILPL1	WASL	0.95	1
RILPL1	21q-Del	0.95	1
RIMBP3	TXNIP	0.95	1
RIMBP3	WASL	0.95	1
RIMBP3	21q-Del	0.95	1
STXBP3	TXNIP	0.95	1
STXBP3	WASL	0.95	1
STXBP3	21q-Del	0.95	1
TXNIP	ZNF438	0.95	1
VHL	ZFYVE26	0.95	1
WASL	ZNF438	0.95	1
WASL	ZNF521	0.95	1
ZC3H3	20q-Amp	0.95	1
2q-Amp	Del_9p23	0.95	1
13q-Del	Del_11q23.1	0.95	1
BCLAF1	Del_13q13.2	0.951	1
CDK12	Del_4q34.3	0.951	1
CDKN2A	KDM6A	0.951	1
CDKN2A	NF1	0.951	1
CXorf23	KDM6A	0.951	1
CXorf23	NF1	0.951	1
CYP2C18	TP53	0.951	1
DNAJA3	KDM6A	0.951	1
DNAJA3	NF1	0.951	1
ECHDC2	KDM6A	0.951	1
ECHDC2	NF1	0.951	1
EPS15L1	16p-Amp	0.951	1
EPS15L1	8p-Del	0.951	1
F2RL1	TP53	0.951	1
FAM178A	Del_4q34.3	0.951	1
GLS	Del_4q34.3	0.951	1
GPR50	Del_3p12.2	0.951	1
HSPA2	KDM6A	0.951	1
HSPA2	NF1	0.951	1
IFNB1	TP53	0.951	1
KCNK1	TP53	0.951	1
KDM6A	KIF16B	0.951	1
KDM6A	KLK10	0.951	1
KDM6A	PAM	0.951	1
KDM6A	VCL	0.951	1
KDM6A	ZNF532	0.951	1
KIF16B	NF1	0.951	1
KLK10	NF1	0.951	1
MTOR	5q-Amp	0.951	1
NDUFA3	TP53	0.951	1
NF1	PAM	0.951	1
NF1	VCL	0.951	1
NF1	ZNF532	0.951	1
NKX2-1	TP53	0.951	1
ONECUT2	TP53	0.951	1
PCK1	20q-Amp	0.951	1
PTEN	RAI1	0.951	1
RALB	TP53	0.951	1
RCN1	TP53	0.951	1
RIN1	TP53	0.951	1
RNF113B	TP53	0.951	1
RNF144A	TP53	0.951	1
SLC14A1	TP53	0.951	1
SMARCB1	SYNE1	0.951	1
STXBP3	Del_3p12.2	0.951	1
SYNE1	Del_3p21.2	0.951	1
TMEM47	TP53	0.951	1
TP53	ZNHIT1	0.951	1
WASL	Del_4q34.3	0.951	1
ZNF521	Del_3p12.2	0.951	1
ACSF2	SETD2	0.952	1
ARAP3	Del_9p21.3	0.952	1
ARID1A	9q-Del	0.952	1
ENO1	Del_9p21.3	0.952	1
NIPBL	Del_9p21.3	0.952	1
PAM	Del_14q31.1	0.952	1
STAG2	Del_9p21.3	0.952	1
VCL	Del_14q31.1	0.952	1
Amp_Xq11.2	Del_9p21.3	0.952	1
ACSF2	Del_14q31.1	0.953	1
C16orf78	Amp_7q31.2	0.953	1
CDCA8	Amp_7q31.2	0.953	1
CSK	10q-Del	0.953	1
ENO1	10q-Del	0.953	1
IMPA2	Amp_7q31.2	0.953	1
INPP5E	Amp_7q31.2	0.953	1
KRAS	16p-Amp	0.953	1
PARD6B	Del_9p21.3	0.953	1
PDLIM4	Amp_7q31.2	0.953	1
PRDX5	Amp_7q31.2	0.953	1
PRODH	Amp_7q31.2	0.953	1
SCYL1	Amp_7q31.2	0.953	1
SETD2	18q-Del	0.953	1
SLC6A14	10q-Del	0.953	1
SMARCA4	ZNF814	0.953	1
TP53	Del_11q23.1	0.953	1
ZC3H3	10q-Del	0.953	1
10q-Del	Amp_Xq11.2	0.953	1
ADAM28	ARID1A	0.954	1
ADCY8	ARAP3	0.954	1
ADCY8	CSK	0.954	1
ADCY8	ENO1	0.954	1
ADCY8	FZR1	0.954	1
ADCY8	SLC6A14	0.954	1
ADCY8	TCEB1	0.954	1
ADCY8	ZC3H3	0.954	1
ADCY8	Amp_Xq11.2	0.954	1
ARAP3	PARD6B	0.954	1
ARAP3	PCK1	0.954	1
ARAP3	SMARCB1	0.954	1
ARAP3	WDR52	0.954	1
ARAP3	ZFYVE26	0.954	1
ARID1A	C16orf78	0.954	1
ARID1A	C9orf171	0.954	1
ARID1A	CARKD	0.954	1
ARID1A	CDCA8	0.954	1
ARID1A	DPYSL4	0.954	1
ARID1A	IMPA2	0.954	1
ARID1A	INPP5E	0.954	1
ARID1A	NEK8	0.954	1
ARID1A	OR10G3	0.954	1
ARID1A	PDLIM4	0.954	1
ARID1A	PRDX5	0.954	1
ARID1A	PRODH	0.954	1
ARID1A	SCYL1	0.954	1
ARID1A	SLC1A7	0.954	1
ARID1A	SPATA13	0.954	1
BCLAF1	17p-Amp	0.954	1
CACNA1C	10q-Del	0.954	1
CDK12	Del_3p12.2	0.954	1
CDKN2A	NEFH	0.954	1
CDKN2A	NFE2L2	0.954	1
CDKN2A	PCF11	0.954	1
CSK	GALNT7	0.954	1
CSK	PARD6B	0.954	1
CSK	PCK1	0.954	1
CSK	SMARCB1	0.954	1
CSK	WDR52	0.954	1
CSK	ZFYVE26	0.954	1
CXorf23	NEFH	0.954	1
CXorf23	NFE2L2	0.954	1
CXorf23	PCF11	0.954	1
CYP2C18	Del_4q34.3	0.954	1
DNAJA3	NEFH	0.954	1
DNAJA3	NFE2L2	0.954	1
DNAJA3	PCF11	0.954	1
ECHDC2	NEFH	0.954	1
ECHDC2	NFE2L2	0.954	1
ECHDC2	PCF11	0.954	1
EDIL3	PBRM1	0.954	1
ENO1	GALNT7	0.954	1
ENO1	PCK1	0.954	1
ENO1	SMARCB1	0.954	1
ENO1	WDR52	0.954	1
ENO1	ZFYVE26	0.954	1
F2RL1	Del_4q34.3	0.954	1
FGFR3	3p-Amp	0.954	1
FZR1	GALNT7	0.954	1
FZR1	PARD6B	0.954	1
FZR1	PCK1	0.954	1
FZR1	SMARCB1	0.954	1
FZR1	WDR52	0.954	1
FZR1	ZFYVE26	0.954	1
GALNT7	SLC6A14	0.954	1
GALNT7	TCEB1	0.954	1
GALNT7	ZC3H3	0.954	1
GALNT7	Amp_Xq11.2	0.954	1
GLS	Del_3p12.2	0.954	1
HSPA2	NEFH	0.954	1
HSPA2	NFE2L2	0.954	1
HSPA2	PCF11	0.954	1
IFNB1	Del_4q34.3	0.954	1
KCNK1	Del_4q34.3	0.954	1
KIF16B	NEFH	0.954	1
KIF16B	NFE2L2	0.954	1
KIF16B	PCF11	0.954	1
KLK10	NFE2L2	0.954	1
KLK10	PCF11	0.954	1
MTOR	5p-Amp	0.954	1
MYF6	PBRM1	0.954	1
NDUFA3	Del_4q34.3	0.954	1
NEFH	PAM	0.954	1
NEFH	VCL	0.954	1
NEFH	ZNF532	0.954	1
NFE2L2	PAM	0.954	1
NFE2L2	VCL	0.954	1
NFE2L2	ZNF532	0.954	1
NIPBL	16q-Amp	0.954	1
NIPBL	10q-Del	0.954	1
NKX2-1	Del_4q34.3	0.954	1
ONECUT2	Del_4q34.3	0.954	1
PAM	PCF11	0.954	1
PARD6B	SLC6A14	0.954	1
PARD6B	TCEB1	0.954	1
PARD6B	ZC3H3	0.954	1
PARD6B	Amp_Xq11.2	0.954	1
PBRM1	RIMBP3	0.954	1
PBRM1	ZNF521	0.954	1
PCF11	VCL	0.954	1
PCK1	SLC6A14	0.954	1
PCK1	TCEB1	0.954	1
PCK1	ZC3H3	0.954	1
PCK1	Amp_Xq11.2	0.954	1
RALB	Del_4q34.3	0.954	1
RCN1	Del_4q34.3	0.954	1
RNF113B	Del_4q34.3	0.954	1
RNF144A	Del_4q34.3	0.954	1
SLC14A1	Del_4q34.3	0.954	1
SLC23A1	3p-Amp	0.954	1
SLC6A14	SMARCB1	0.954	1
SLC6A14	WDR52	0.954	1
SLC6A14	ZFYVE26	0.954	1
SMARCB1	TCEB1	0.954	1
SMARCB1	ZC3H3	0.954	1
SMARCB1	Amp_Xq11.2	0.954	1
TCEB1	WDR52	0.954	1
TCEB1	ZFYVE26	0.954	1
TMEM47	Del_4q34.3	0.954	1
WDR52	ZC3H3	0.954	1
WDR52	Amp_Xq11.2	0.954	1
ZC3H3	ZFYVE26	0.954	1
ZFYVE26	Amp_Xq11.2	0.954	1
ZNF814	12q-Amp	0.954	1
ZNHIT1	Del_4q34.3	0.954	1
ARID1A	9p-Del	0.955	1
ATM	SYNE1	0.955	1
CSF1R	Del_1p31.1	0.955	1
FAT1	1p-Del	0.955	1
FGFR3	KRAS	0.955	1
FGFR3	NOM1	0.955	1
FGFR3	NTRK3	0.955	1
FGFR3	PODXL	0.955	1
FGFR3	SLC23A1	0.955	1
KRAS	NOM1	0.955	1
KRAS	NTRK3	0.955	1
KRAS	PODXL	0.955	1
KRAS	SLC23A1	0.955	1
NOM1	NTRK3	0.955	1
NOM1	PODXL	0.955	1
NOM1	SLC23A1	0.955	1
NTRK3	PODXL	0.955	1
NTRK3	SLC23A1	0.955	1
PCF11	Amp_17q24.3	0.955	1
PODXL	SLC23A1	0.955	1
SLC23A1	17p-Amp	0.955	1
WDR52	10q-Del	0.955	1
17p-Amp	21q-Del	0.955	1
ARHGAP33	ARHGAP35	0.956	1
ARHGAP33	CSF1R	0.956	1
ARHGAP33	EGFR	0.956	1
ARHGAP33	KIAA0922	0.956	1
ARHGAP33	PRKAG2	0.956	1
ARHGAP33	PTCH1	0.956	1
ARHGAP35	BRAF	0.956	1
ARHGAP35	EDIL3	0.956	1
ARHGAP35	GPR50	0.956	1
ARHGAP35	MYF6	0.956	1
ARHGAP35	NASP	0.956	1
ARHGAP35	NUDT11	0.956	1
ARHGAP35	RILPL1	0.956	1
ARHGAP35	RIMBP3	0.956	1
ARHGAP35	STXBP3	0.956	1
ARHGAP35	ZNF438	0.956	1
ARHGAP35	ZNF521	0.956	1
ARID1A	NIPBL	0.956	1
ARID1A	PIK3CA	0.956	1
BRAF	CSF1R	0.956	1
BRAF	EGFR	0.956	1
BRAF	KIAA0922	0.956	1
BRAF	PRKAG2	0.956	1
BRAF	PTCH1	0.956	1
C16orf78	7p-Amp	0.956	1
C16orf78	7q-Amp	0.956	1
CDCA8	7p-Amp	0.956	1
CDCA8	7q-Amp	0.956	1
CDK12	MTOR	0.956	1
CDK12	3q-Del	0.956	1
CSF1R	EDIL3	0.956	1
CSF1R	GPR50	0.956	1
CSF1R	MYF6	0.956	1
CSF1R	NASP	0.956	1
CSF1R	NUDT11	0.956	1
CSF1R	RILPL1	0.956	1
CSF1R	RIMBP3	0.956	1
CSF1R	STXBP3	0.956	1
CSF1R	ZNF438	0.956	1
CSF1R	ZNF521	0.956	1
CSK	Del_2q37.3	0.956	1
CYP2C18	MTOR	0.956	1
CYP2C18	3q-Del	0.956	1
EDIL3	EGFR	0.956	1
EDIL3	KIAA0922	0.956	1
EDIL3	PRKAG2	0.956	1
EDIL3	3q-Amp	0.956	1
EGFR	GPR50	0.956	1
EGFR	MYF6	0.956	1
EGFR	NASP	0.956	1
EGFR	NUDT11	0.956	1
EGFR	RILPL1	0.956	1
EGFR	RIMBP3	0.956	1
EGFR	STXBP3	0.956	1
EGFR	ZNF438	0.956	1
EGFR	ZNF521	0.956	1
F2RL1	MTOR	0.956	1
F2RL1	3q-Del	0.956	1
FAM178A	MTOR	0.956	1
GLS	12p-Amp	0.956	1
GPR50	KIAA0922	0.956	1
GPR50	PRKAG2	0.956	1
GPR50	PTCH1	0.956	1
GPR50	3q-Amp	0.956	1
IFNB1	MTOR	0.956	1
IFNB1	3q-Del	0.956	1
IMPA2	7p-Amp	0.956	1
IMPA2	7q-Amp	0.956	1
INPP5E	7p-Amp	0.956	1
INPP5E	7q-Amp	0.956	1
KCNK1	MTOR	0.956	1
KCNK1	3q-Del	0.956	1
KDM5C	Del_10q23.31	0.956	1
KIAA0922	MYF6	0.956	1
KIAA0922	NUDT11	0.956	1
KIAA0922	RILPL1	0.956	1
KIAA0922	RIMBP3	0.956	1
KIAA0922	STXBP3	0.956	1
KIAA0922	ZNF438	0.956	1
KIAA0922	ZNF521	0.956	1
MTOR	NKX2-1	0.956	1
MTOR	ONECUT2	0.956	1
MTOR	RALB	0.956	1
MTOR	RCN1	0.956	1
MTOR	RIN1	0.956	1
MTOR	RNF113B	0.956	1
MTOR	RNF144A	0.956	1
MTOR	SLC14A1	0.956	1
MTOR	TMEM47	0.956	1
MTOR	ZNHIT1	0.956	1
MYF6	PTCH1	0.956	1
MYF6	13q-Del	0.956	1
NASP	PRKAG2	0.956	1
NASP	PTCH1	0.956	1
NDUFA3	3q-Del	0.956	1
NKX2-1	3q-Del	0.956	1
NUDT11	PRKAG2	0.956	1
PDLIM4	7p-Amp	0.956	1
PDLIM4	7q-Amp	0.956	1
PRDX5	7p-Amp	0.956	1
PRDX5	7q-Amp	0.956	1
PRKAG2	RILPL1	0.956	1
PRKAG2	RIMBP3	0.956	1
PRKAG2	STXBP3	0.956	1
PRKAG2	ZNF438	0.956	1
PRKAG2	ZNF521	0.956	1
PRKAG2	14q-Del	0.956	1
PRODH	7p-Amp	0.956	1
PRODH	7q-Amp	0.956	1
PTCH1	RILPL1	0.956	1
PTCH1	RIMBP3	0.956	1
PTCH1	STXBP3	0.956	1
PTCH1	ZNF438	0.956	1
PTCH1	ZNF521	0.956	1
RALB	3q-Del	0.956	1
RCN1	3q-Del	0.956	1
RILPL1	3q-Amp	0.956	1
RIMBP3	13q-Del	0.956	1
RIN1	3q-Del	0.956	1
RNF113B	3q-Del	0.956	1
RNF144A	3q-Del	0.956	1
SLC14A1	3q-Del	0.956	1
SLC6A14	Del_2q37.3	0.956	1
WASL	12p-Amp	0.956	1
ZC3H3	Del_2q37.3	0.956	1
ZNF521	13q-Del	0.956	1
ZNHIT1	3q-Del	0.956	1
12q-Amp	5p-Amp	0.957	1
ACSF2	CDKN2A	0.958	1
ACSF2	CXorf23	0.958	1
ACSF2	DNAJA3	0.958	1
ACSF2	ECHDC2	0.958	1
ACSF2	HSPA2	0.958	1
ACSF2	KIF16B	0.958	1
ACSF2	KLK10	0.958	1
ACSF2	MET	0.958	1
ACSF2	PAM	0.958	1
ACSF2	VCL	0.958	1
ACSF2	ZNF532	0.958	1
BCLAF1	17p-Del	0.958	1
CDKN2A	DNMT3A	0.958	1
CDKN2A	RAI1	0.958	1
CXorf23	DNMT3A	0.958	1
DNAJA3	DNMT3A	0.958	1
DNAJA3	RAI1	0.958	1
DNMT3A	ECHDC2	0.958	1
DNMT3A	HSPA2	0.958	1
DNMT3A	KIF16B	0.958	1
DNMT3A	KLK10	0.958	1
DNMT3A	MET	0.958	1
DNMT3A	PAM	0.958	1
DNMT3A	VCL	0.958	1
DNMT3A	ZNF532	0.958	1
ECHDC2	RAI1	0.958	1
HSPA2	RAI1	0.958	1
KIF16B	RAI1	0.958	1
KIF16B	Del_1p31.1	0.958	1
KLK10	RAI1	0.958	1
MTOR	Amp_5q35.1	0.958	1
PAM	RAI1	0.958	1
PAM	14q-Del	0.958	1
PCF11	18q-Del	0.958	1
PODXL	Del_6q26	0.958	1
RAI1	VCL	0.958	1
RAI1	ZNF532	0.958	1
VCL	14q-Del	0.958	1
ADAM28	CUL3	0.959	1
ADAM28	NF2	0.959	1
ADAM28	Del_16q23.3	0.959	1
ARAP3	CDK12	0.959	1
ARAP3	FAM178A	0.959	1
ARAP3	GLS	0.959	1
ARAP3	TXNIP	0.959	1
ARAP3	WASL	0.959	1
ATM	NF1	0.959	1
BCLAF1	Amp_2q32.1	0.959	1
BRAF	Amp_17q24.3	0.959	1
C16orf78	CUL3	0.959	1
C16orf78	NF2	0.959	1
C16orf78	Del_16q23.3	0.959	1
C9orf171	CUL3	0.959	1
C9orf171	NF2	0.959	1
C9orf171	Del_16q23.3	0.959	1
CARKD	CUL3	0.959	1
CARKD	NF2	0.959	1
CARKD	Del_16q23.3	0.959	1
CDCA8	NF2	0.959	1
CDCA8	Del_16q23.3	0.959	1
CDK12	CSK	0.959	1
CDK12	ENO1	0.959	1
CDK12	FZR1	0.959	1
CDK12	SLC6A14	0.959	1
CDK12	TCEB1	0.959	1
CDK12	ZC3H3	0.959	1
CDK12	Amp_Xq11.2	0.959	1
CSK	FAM178A	0.959	1
CSK	GLS	0.959	1
CSK	TXNIP	0.959	1
CSK	WASL	0.959	1
CSK	Del_1q44	0.959	1
CUL3	DPYSL4	0.959	1
CUL3	IMPA2	0.959	1
CUL3	INPP5E	0.959	1
CUL3	NEK8	0.959	1
CUL3	OR10G3	0.959	1
CUL3	PDLIM4	0.959	1
CUL3	PRDX5	0.959	1
CUL3	PRODH	0.959	1
CUL3	SCYL1	0.959	1
CUL3	SLC1A7	0.959	1
CUL3	SPATA13	0.959	1
CYP2C18	SYNE1	0.959	1
DPYSL4	NF2	0.959	1
DPYSL4	Del_16q23.3	0.959	1
EDIL3	Amp_17q24.3	0.959	1
ENO1	FAM178A	0.959	1
ENO1	TXNIP	0.959	1
ENO1	WASL	0.959	1
ENO1	Del_1q44	0.959	1
F2RL1	SYNE1	0.959	1
FAM178A	FZR1	0.959	1
FAM178A	SLC6A14	0.959	1
FAM178A	TCEB1	0.959	1
FAM178A	ZC3H3	0.959	1
FAM178A	Amp_Xq11.2	0.959	1
FAT1	NF1	0.959	1
FAT1	18q-Del	0.959	1
FZR1	GLS	0.959	1
FZR1	TXNIP	0.959	1
FZR1	WASL	0.959	1
FZR1	Del_1q44	0.959	1
GALNT7	Del_11q23.1	0.959	1
GLS	SLC6A14	0.959	1
GLS	TCEB1	0.959	1
GLS	ZC3H3	0.959	1
GLS	Amp_Xq11.2	0.959	1
GPR50	Del_2q22.1	0.959	1
IFNB1	SYNE1	0.959	1
IMPA2	NF2	0.959	1
IMPA2	Del_16q23.3	0.959	1
INPP5E	NF2	0.959	1
INPP5E	Del_16q23.3	0.959	1
NASP	Del_2q22.1	0.959	1
NEK8	NF2	0.959	1
NEK8	Del_16q23.3	0.959	1
NF1	SMARCA4	0.959	1
NF2	OR10G3	0.959	1
NF2	PDLIM4	0.959	1
NF2	PRDX5	0.959	1
NF2	PRODH	0.959	1
NF2	SCYL1	0.959	1
NF2	SLC1A7	0.959	1
NF2	SPATA13	0.959	1
NKX2-1	SYNE1	0.959	1
ONECUT2	SYNE1	0.959	1
OR10G3	Del_16q23.3	0.959	1
PDLIM4	Del_16q23.3	0.959	1
PRDX5	Del_16q23.3	0.959	1
RALB	SYNE1	0.959	1
RCN1	SYNE1	0.959	1
RILPL1	Del_2q22.1	0.959	1
RIN1	SYNE1	0.959	1
RNF113B	SYNE1	0.959	1
RNF144A	SYNE1	0.959	1
SCYL1	Del_16q23.3	0.959	1
SLC14A1	SYNE1	0.959	1
SLC6A14	TXNIP	0.959	1
SLC6A14	Del_1q44	0.959	1
SYNE1	TMEM47	0.959	1
SYNE1	ZNHIT1	0.959	1
TCEB1	TXNIP	0.959	1
TCEB1	WASL	0.959	1
TXNIP	ZC3H3	0.959	1
TXNIP	Amp_Xq11.2	0.959	1
VHL	5p-Amp	0.959	1
WASL	ZC3H3	0.959	1
WASL	Amp_Xq11.2	0.959	1
ZC3H3	Del_1q44	0.959	1
ZNF438	Amp_17q24.3	0.959	1
ZNF814	20p-Amp	0.959	1
21q-Del	Amp_7q31.2	0.959	1
ARAP3	8p-Del	0.96	1
ARAP3	Del_9p23	0.96	1
BCLAF1	5q-Amp	0.96	1
CDK12	1p-Del	0.96	1
CDKN2A	Amp_5q35.1	0.96	1
CSK	Del_13q13.2	0.96	1
CUL3	Del_16q23.3	0.96	1
ECHDC2	Amp_5q35.1	0.96	1
ENO1	8p-Del	0.96	1
ENO1	Del_9p23	0.96	1
FAM178A	1p-Del	0.96	1
GLS	12q-Amp	0.96	1
KIF16B	Amp_5q35.1	0.96	1
MTOR	Del_3p21.2	0.96	1
RILPL1	18q-Del	0.96	1
RIMBP3	18q-Del	0.96	1
SLC6A14	8p-Del	0.96	1
SLC6A14	Del_9p23	0.96	1
TCEB1	8p-Del	0.96	1
TP53	Del_9p23	0.96	1
VCL	Amp_5q35.1	0.96	1
ZC3H3	8p-Del	0.96	1
5p-Amp	7p-Amp	0.96	1
18p-Del	Del_3p21.2	0.96	1
8p-Del	Amp_Xq11.2	0.96	1
Amp_Xq11.2	Del_9p23	0.96	1
ALMS1	ARID1A	0.961	1
CDK12	SYNE1	0.961	1
EPS15L1	16q-Amp	0.961	1
GLS	6p-Del	0.961	1
KRAS	16q-Amp	0.961	1
SYNE1	TXNIP	0.961	1
TXNIP	6p-Del	0.961	1
ZNF814	20q-Amp	0.961	1
ADAM28	AR	0.962	1
ADAM28	CACNA1C	0.962	1
ADAM28	NIPBL	0.962	1
ADAM28	PIK3CA	0.962	1
ADAM28	STAG2	0.962	1
AR	C16orf78	0.962	1
AR	C9orf171	0.962	1
AR	CARKD	0.962	1
AR	CDCA8	0.962	1
AR	DPYSL4	0.962	1
AR	IMPA2	0.962	1
AR	INPP5E	0.962	1
AR	NEK8	0.962	1
AR	OR10G3	0.962	1
AR	PDLIM4	0.962	1
AR	PRDX5	0.962	1
AR	PRODH	0.962	1
AR	SCYL1	0.962	1
AR	SLC1A7	0.962	1
AR	SPATA13	0.962	1
ARHGAP33	FGFR3	0.962	1
ARHGAP33	KRAS	0.962	1
ARHGAP33	NOM1	0.962	1
ARHGAP33	PODXL	0.962	1
ARHGAP33	SLC23A1	0.962	1
BCLAF1	CDKN2A	0.962	1
BCLAF1	CXorf23	0.962	1
BCLAF1	DNAJA3	0.962	1
BCLAF1	ECHDC2	0.962	1
BCLAF1	HSPA2	0.962	1
BCLAF1	KIF16B	0.962	1
BCLAF1	KLK10	0.962	1
BCLAF1	PAM	0.962	1
BCLAF1	VCL	0.962	1
BCLAF1	ZNF532	0.962	1
BCLAF1	5p-Amp	0.962	1
BRAF	FGFR3	0.962	1
BRAF	KRAS	0.962	1
BRAF	NOM1	0.962	1
BRAF	NTRK3	0.962	1
BRAF	PODXL	0.962	1
BRAF	SLC23A1	0.962	1
C16orf78	CACNA1C	0.962	1
C16orf78	NIPBL	0.962	1
C16orf78	PIK3CA	0.962	1
C16orf78	STAG2	0.962	1
C9orf171	CACNA1C	0.962	1
C9orf171	NIPBL	0.962	1
C9orf171	PIK3CA	0.962	1
C9orf171	STAG2	0.962	1
CACNA1C	CARKD	0.962	1
CACNA1C	CDCA8	0.962	1
CACNA1C	IMPA2	0.962	1
CACNA1C	INPP5E	0.962	1
CACNA1C	NEK8	0.962	1
CACNA1C	OR10G3	0.962	1
CACNA1C	PDLIM4	0.962	1
CACNA1C	PRDX5	0.962	1
CACNA1C	PRODH	0.962	1
CACNA1C	SCYL1	0.962	1
CACNA1C	SLC1A7	0.962	1
CARKD	NIPBL	0.962	1
CARKD	PIK3CA	0.962	1
CARKD	STAG2	0.962	1
CDCA8	NIPBL	0.962	1
CDCA8	PIK3CA	0.962	1
CDCA8	STAG2	0.962	1
CDKN2A	EPS15L1	0.962	1
CXorf23	EPS15L1	0.962	1
DNAJA3	EPS15L1	0.962	1
DPYSL4	NIPBL	0.962	1
DPYSL4	PIK3CA	0.962	1
DPYSL4	STAG2	0.962	1
ECHDC2	EPS15L1	0.962	1
EDIL3	FGFR3	0.962	1
EDIL3	KRAS	0.962	1
EDIL3	NOM1	0.962	1
EDIL3	PODXL	0.962	1
EDIL3	SLC23A1	0.962	1
EPS15L1	HSPA2	0.962	1
EPS15L1	KIF16B	0.962	1
EPS15L1	KLK10	0.962	1
EPS15L1	PAM	0.962	1
EPS15L1	VCL	0.962	1
EPS15L1	ZNF532	0.962	1
EPS15L1	Del_1p36.31	0.962	1
FGFR3	GPR50	0.962	1
FGFR3	MYF6	0.962	1
FGFR3	NASP	0.962	1
FGFR3	NUDT11	0.962	1
FGFR3	RILPL1	0.962	1
FGFR3	RIMBP3	0.962	1
FGFR3	STXBP3	0.962	1
FGFR3	ZNF438	0.962	1
FGFR3	ZNF521	0.962	1
FZR1	Amp_3q26.32	0.962	1
GPR50	KRAS	0.962	1
GPR50	NOM1	0.962	1
GPR50	NTRK3	0.962	1
GPR50	PODXL	0.962	1
GPR50	SLC23A1	0.962	1
IMPA2	NIPBL	0.962	1
IMPA2	STAG2	0.962	1
INPP5E	NIPBL	0.962	1
INPP5E	PIK3CA	0.962	1
INPP5E	STAG2	0.962	1
KDM6A	3p-Amp	0.962	1
KRAS	NASP	0.962	1
KRAS	NUDT11	0.962	1
KRAS	RILPL1	0.962	1
KRAS	RIMBP3	0.962	1
KRAS	STXBP3	0.962	1
KRAS	ZNF438	0.962	1
KRAS	ZNF521	0.962	1
MYF6	NOM1	0.962	1
MYF6	NTRK3	0.962	1
MYF6	PODXL	0.962	1
MYF6	SLC23A1	0.962	1
NASP	NOM1	0.962	1
NASP	NTRK3	0.962	1
NASP	PODXL	0.962	1
NASP	SLC23A1	0.962	1
NEK8	NIPBL	0.962	1
NEK8	PIK3CA	0.962	1
NEK8	STAG2	0.962	1
NF1	3p-Amp	0.962	1
NIPBL	OR10G3	0.962	1
NIPBL	PDLIM4	0.962	1
NIPBL	PRDX5	0.962	1
NIPBL	SCYL1	0.962	1
NIPBL	SPATA13	0.962	1
NOM1	NUDT11	0.962	1
NOM1	RILPL1	0.962	1
NOM1	RIMBP3	0.962	1
NOM1	STXBP3	0.962	1
NOM1	ZNF438	0.962	1
NOM1	ZNF521	0.962	1
NTRK3	NUDT11	0.962	1
NTRK3	RILPL1	0.962	1
NTRK3	RIMBP3	0.962	1
NTRK3	STXBP3	0.962	1
NTRK3	ZNF438	0.962	1
NTRK3	ZNF521	0.962	1
NUDT11	PODXL	0.962	1
NUDT11	SLC23A1	0.962	1
OR10G3	PIK3CA	0.962	1
OR10G3	STAG2	0.962	1
PDLIM4	PIK3CA	0.962	1
PDLIM4	STAG2	0.962	1
PIK3CA	PRDX5	0.962	1
PIK3CA	PRODH	0.962	1
PODXL	RILPL1	0.962	1
PODXL	RIMBP3	0.962	1
PODXL	STXBP3	0.962	1
PODXL	ZNF438	0.962	1
PODXL	ZNF521	0.962	1
PRDX5	STAG2	0.962	1
PRODH	STAG2	0.962	1
RILPL1	SLC23A1	0.962	1
RIMBP3	SLC23A1	0.962	1
SCYL1	STAG2	0.962	1
SLC1A7	STAG2	0.962	1
SLC23A1	STXBP3	0.962	1
SPATA13	STAG2	0.962	1
WDR52	Del_1q44	0.962	1
16q-Amp	5p-Amp	0.962	1
2q-Amp	5q-Amp	0.962	1
CDK12	Del_8p23.2	0.963	1
CUL3	14q-Del	0.963	1
CYP2C18	Del_11q23.1	0.963	1
EPS15L1	SETD2	0.963	1
F2RL1	Del_11q23.1	0.963	1
FAM178A	Amp_17q24.3	0.963	1
IFNB1	Del_11q23.1	0.963	1
KCNK1	Del_11q23.1	0.963	1
KLK10	6q-Del	0.963	1
MTOR	Del_9p21.3	0.963	1
NDUFA3	Del_11q23.1	0.963	1
NKX2-1	Del_11q23.1	0.963	1
ONECUT2	Del_11q23.1	0.963	1
RALB	Del_11q23.1	0.963	1
RCN1	Del_11q23.1	0.963	1
RIN1	Del_11q23.1	0.963	1
RNF113B	Del_11q23.1	0.963	1
RNF144A	Del_11q23.1	0.963	1
SLC14A1	Del_11q23.1	0.963	1
SYNE1	1p-Del	0.963	1
TMEM47	Del_11q23.1	0.963	1
ZNF532	6q-Del	0.963	1
ZNHIT1	Del_11q23.1	0.963	1
ACSF2	14q-Del	0.964	1
ADAM28	ALMS1	0.964	1
ADAM28	ZNF814	0.964	1
ALMS1	C16orf78	0.964	1
ALMS1	C9orf171	0.964	1
ALMS1	CARKD	0.964	1
ALMS1	CDCA8	0.964	1
ALMS1	DPYSL4	0.964	1
ALMS1	IMPA2	0.964	1
ALMS1	INPP5E	0.964	1
ALMS1	NEK8	0.964	1
ALMS1	PDLIM4	0.964	1
ALMS1	PRDX5	0.964	1
ALMS1	PRODH	0.964	1
ALMS1	SCYL1	0.964	1
ALMS1	SLC1A7	0.964	1
ALMS1	SPATA13	0.964	1
AR	CUL3	0.964	1
AR	Del_16q23.3	0.964	1
ARAP3	ARHGAP35	0.964	1
ARAP3	CSF1R	0.964	1
ARAP3	EGFR	0.964	1
ARAP3	KIAA0922	0.964	1
ARAP3	PRKAG2	0.964	1
ARAP3	PTCH1	0.964	1
ARAP3	17p-Del	0.964	1
ARHGAP35	CSK	0.964	1
ARHGAP35	ENO1	0.964	1
ARHGAP35	FZR1	0.964	1
ARHGAP35	SLC6A14	0.964	1
ARHGAP35	TCEB1	0.964	1
ARHGAP35	ZC3H3	0.964	1
ARHGAP35	Amp_Xq11.2	0.964	1
C16orf78	ZNF814	0.964	1
C9orf171	ZNF814	0.964	1
CACNA1C	CUL3	0.964	1
CACNA1C	Del_16q23.3	0.964	1
CARKD	ZNF814	0.964	1
CDCA8	ZNF814	0.964	1
CDK12	20p-Amp	0.964	1
CSF1R	CSK	0.964	1
CSF1R	FZR1	0.964	1
CSF1R	SLC6A14	0.964	1
CSF1R	TCEB1	0.964	1
CSF1R	ZC3H3	0.964	1
CSF1R	Amp_Xq11.2	0.964	1
CSK	EGFR	0.964	1
CSK	KIAA0922	0.964	1
CSK	PRKAG2	0.964	1
CSK	PTCH1	0.964	1
CSK	17p-Del	0.964	1
CUL3	NIPBL	0.964	1
CUL3	PIK3CA	0.964	1
DPYSL4	ZNF814	0.964	1
EGFR	ENO1	0.964	1
EGFR	FZR1	0.964	1
EGFR	SLC6A14	0.964	1
EGFR	TCEB1	0.964	1
EGFR	ZC3H3	0.964	1
EGFR	Amp_Xq11.2	0.964	1
EGFR	Del_3p21.2	0.964	1
ENO1	KIAA0922	0.964	1
ENO1	PRKAG2	0.964	1
ENO1	PTCH1	0.964	1
ENO1	17p-Del	0.964	1
FAM178A	20p-Amp	0.964	1
FZR1	KIAA0922	0.964	1
FZR1	PTCH1	0.964	1
GALNT7	KDM5C	0.964	1
GLS	20p-Amp	0.964	1
IMPA2	ZNF814	0.964	1
INPP5E	ZNF814	0.964	1
KDM5C	ZFYVE26	0.964	1
KIAA0922	SLC6A14	0.964	1
KIAA0922	TCEB1	0.964	1
KIAA0922	ZC3H3	0.964	1
KIAA0922	Amp_Xq11.2	0.964	1
NEK8	ZNF814	0.964	1
NF2	STAG2	0.964	1
NIPBL	Del_16q23.3	0.964	1
OR10G3	ZNF814	0.964	1
PARD6B	Del_9p23	0.964	1
PCF11	18p-Del	0.964	1
PDLIM4	ZNF814	0.964	1
PRDX5	ZNF814	0.964	1
PRKAG2	SLC6A14	0.964	1
PRKAG2	TCEB1	0.964	1
PRKAG2	ZC3H3	0.964	1
PRKAG2	Amp_Xq11.2	0.964	1
PRODH	ZNF814	0.964	1
PTCH1	SLC6A14	0.964	1
PTCH1	TCEB1	0.964	1
PTCH1	ZC3H3	0.964	1
PTCH1	Amp_Xq11.2	0.964	1
PTCH1	Del_3p21.2	0.964	1
RILPL1	18p-Del	0.964	1
SCYL1	ZNF814	0.964	1
SLC1A7	ZNF814	0.964	1
SLC6A14	17p-Del	0.964	1
SPATA13	ZNF814	0.964	1
STAG2	Del_16q23.3	0.964	1
VHL	8p-Del	0.964	1
ZC3H3	17p-Del	0.964	1
17p-Del	Amp_Xq11.2	0.964	1
ARAP3	5q-Amp	0.965	1
ATM	NEFH	0.965	1
ATM	NFE2L2	0.965	1
BCLAF1	21q-Del	0.965	1
CARKD	Del_3p12.2	0.965	1
CDCA8	Del_3p12.2	0.965	1
CDK12	20q-Amp	0.965	1
CYP2C18	KDM5C	0.965	1
DPYSL4	Del_3p12.2	0.965	1
ENO1	5q-Amp	0.965	1
F2RL1	KDM5C	0.965	1
FAM178A	20q-Amp	0.965	1
FAT1	NFE2L2	0.965	1
GLS	20q-Amp	0.965	1
IFNB1	KDM5C	0.965	1
INPP5E	Del_3p12.2	0.965	1
KCNK1	KDM5C	0.965	1
KDM5C	NDUFA3	0.965	1
KDM5C	NKX2-1	0.965	1
KDM5C	ONECUT2	0.965	1
KDM5C	RALB	0.965	1
KDM5C	RCN1	0.965	1
KDM5C	RIN1	0.965	1
KDM5C	RNF113B	0.965	1
KDM5C	RNF144A	0.965	1
KDM5C	SLC14A1	0.965	1
KDM5C	TMEM47	0.965	1
KDM5C	ZNHIT1	0.965	1
NEFH	SMARCA4	0.965	1
NEK8	Del_3p12.2	0.965	1
NIPBL	Del_9p23	0.965	1
PDLIM4	Del_3p12.2	0.965	1
PRDX5	Del_3p12.2	0.965	1
SYNE1	Del_1p31.1	0.965	1
2q-Amp	5p-Amp	0.965	1
5p-Amp	Del_9p23	0.965	1
5q-Amp	Amp_7q31.2	0.965	1
ADCY8	CDKN2A	0.966	1
ADCY8	CXorf23	0.966	1
ADCY8	DNAJA3	0.966	1
ADCY8	HSPA2	0.966	1
ADCY8	KIF16B	0.966	1
ADCY8	KLK10	0.966	1
ADCY8	PAM	0.966	1
ADCY8	VCL	0.966	1
ADCY8	ZNF532	0.966	1
ARAP3	5p-Amp	0.966	1
ARHGAP35	MTOR	0.966	1
CDKN2A	GALNT7	0.966	1
CDKN2A	PARD6B	0.966	1
CDKN2A	PCK1	0.966	1
CDKN2A	SMARCB1	0.966	1
CDKN2A	WDR52	0.966	1
CDKN2A	ZFYVE26	0.966	1
CXorf23	GALNT7	0.966	1
CXorf23	PARD6B	0.966	1
CXorf23	PCK1	0.966	1
CXorf23	SMARCB1	0.966	1
CXorf23	WDR52	0.966	1
CXorf23	ZFYVE26	0.966	1
DNAJA3	GALNT7	0.966	1
DNAJA3	PARD6B	0.966	1
DNAJA3	PCK1	0.966	1
DNAJA3	SMARCB1	0.966	1
DNAJA3	WDR52	0.966	1
DNAJA3	ZFYVE26	0.966	1
ECHDC2	GALNT7	0.966	1
ECHDC2	PARD6B	0.966	1
ECHDC2	PCK1	0.966	1
ECHDC2	SMARCB1	0.966	1
ECHDC2	WDR52	0.966	1
ECHDC2	ZFYVE26	0.966	1
ENO1	5p-Amp	0.966	1
ENO1	9q-Del	0.966	1
FAM178A	Del_9p21.3	0.966	1
FAT1	18p-Del	0.966	1
FZR1	5p-Amp	0.966	1
FZR1	9q-Del	0.966	1
GALNT7	HSPA2	0.966	1
GALNT7	KIF16B	0.966	1
GALNT7	KLK10	0.966	1
GALNT7	PAM	0.966	1
GALNT7	ZNF532	0.966	1
HSPA2	PARD6B	0.966	1
HSPA2	PCK1	0.966	1
HSPA2	SMARCB1	0.966	1
HSPA2	WDR52	0.966	1
HSPA2	ZFYVE26	0.966	1
KIF16B	PARD6B	0.966	1
KIF16B	PCK1	0.966	1
KIF16B	SMARCB1	0.966	1
KIF16B	ZFYVE26	0.966	1
KLK10	PARD6B	0.966	1
KLK10	PCK1	0.966	1
KLK10	SMARCB1	0.966	1
KLK10	WDR52	0.966	1
MET	12p-Amp	0.966	1
NEK8	PBRM1	0.966	1
NF2	Del_4q34.3	0.966	1
NOM1	Del_3p14.1	0.966	1
PAM	PARD6B	0.966	1
PAM	PCK1	0.966	1
PAM	SMARCB1	0.966	1
PAM	WDR52	0.966	1
PAM	ZFYVE26	0.966	1
PARD6B	VCL	0.966	1
PARD6B	ZNF532	0.966	1
PBRM1	PDLIM4	0.966	1
PBRM1	PRODH	0.966	1
PCK1	VCL	0.966	1
PCK1	ZNF532	0.966	1
PTCH1	3q-Del	0.966	1
SMARCB1	VCL	0.966	1
SMARCB1	ZNF532	0.966	1
SMARCB1	Amp_3q26.32	0.966	1
SYNE1	14q-Del	0.966	1
VCL	WDR52	0.966	1
VCL	ZFYVE26	0.966	1
WDR52	ZNF532	0.966	1
ZFYVE26	ZNF532	0.966	1
ZNF814	16q-Amp	0.966	1
8p-Del	Del_11q23.1	0.966	1
9q-Del	Amp_Xq11.2	0.966	1
ADAM28	KDM6A	0.967	1
ADAM28	NF1	0.967	1
ARAP3	9p-Del	0.967	1
C16orf78	KDM6A	0.967	1
C16orf78	NF1	0.967	1
C9orf171	KDM6A	0.967	1
C9orf171	NF1	0.967	1
CARKD	KDM6A	0.967	1
CARKD	NF1	0.967	1
CDCA8	KDM6A	0.967	1
CYP2C18	PTEN	0.967	1
CYP2C18	Amp_2q32.1	0.967	1
DNMT3A	18q-Del	0.967	1
DPYSL4	KDM6A	0.967	1
DPYSL4	NF1	0.967	1
ENO1	9p-Del	0.967	1
F2RL1	PTEN	0.967	1
F2RL1	Amp_2q32.1	0.967	1
FZR1	SETD2	0.967	1
FZR1	9p-Del	0.967	1
GALNT7	PTEN	0.967	1
IFNB1	PTEN	0.967	1
IFNB1	Amp_2q32.1	0.967	1
IMPA2	KDM6A	0.967	1
IMPA2	NF1	0.967	1
INPP5E	KDM6A	0.967	1
INPP5E	NF1	0.967	1
KCNK1	PTEN	0.967	1
KCNK1	Amp_2q32.1	0.967	1
KDM6A	NEK8	0.967	1
KDM6A	OR10G3	0.967	1
KDM6A	PDLIM4	0.967	1
KDM6A	PRDX5	0.967	1
KDM6A	PRODH	0.967	1
KDM6A	SCYL1	0.967	1
KDM6A	SLC1A7	0.967	1
KDM6A	SPATA13	0.967	1
KDM6A	16p-Amp	0.967	1
NDUFA3	PTEN	0.967	1
NDUFA3	Amp_2q32.1	0.967	1
NEK8	NF1	0.967	1
NF1	OR10G3	0.967	1
NF1	PDLIM4	0.967	1
NF1	PRDX5	0.967	1
NF1	SCYL1	0.967	1
NF1	SPATA13	0.967	1
NKX2-1	PTEN	0.967	1
ONECUT2	PTEN	0.967	1
ONECUT2	Amp_2q32.1	0.967	1
PTEN	RCN1	0.967	1
PTEN	RIN1	0.967	1
PTEN	RNF113B	0.967	1
PTEN	RNF144A	0.967	1
PTEN	SLC14A1	0.967	1
PTEN	TMEM47	0.967	1
PTEN	TP53	0.967	1
PTEN	ZNHIT1	0.967	1
PTEN	13q-Del	0.967	1
RALB	Amp_2q32.1	0.967	1
RCN1	Amp_2q32.1	0.967	1
RIN1	Amp_2q32.1	0.967	1
RNF113B	Amp_2q32.1	0.967	1
RNF144A	Amp_2q32.1	0.967	1
SETD2	ZC3H3	0.967	1
SETD2	Amp_Xq11.2	0.967	1
TMEM47	Amp_2q32.1	0.967	1
ZFYVE26	Amp_2q32.1	0.967	1
ZNHIT1	Amp_2q32.1	0.967	1
14q-Del	Del_1q44	0.967	1
9p-Del	Amp_Xq11.2	0.967	1
Del_1p36.31	Del_3p12.2	0.967	1
Del_1q44	Del_4q34.3	0.967	1
ARAP3	21q-Del	0.968	1
ARHGAP33	BRAF	0.968	1
ARHGAP33	EDIL3	0.968	1
ARHGAP33	GPR50	0.968	1
ARHGAP33	MYF6	0.968	1
ARHGAP33	NUDT11	0.968	1
ARHGAP33	RILPL1	0.968	1
ARHGAP33	RIMBP3	0.968	1
ARHGAP33	STXBP3	0.968	1
ARHGAP33	ZNF438	0.968	1
ARHGAP33	ZNF521	0.968	1
BRAF	EDIL3	0.968	1
BRAF	GPR50	0.968	1
BRAF	MYF6	0.968	1
BRAF	NASP	0.968	1
BRAF	NUDT11	0.968	1
BRAF	RILPL1	0.968	1
BRAF	RIMBP3	0.968	1
BRAF	STXBP3	0.968	1
BRAF	ZNF438	0.968	1
BRAF	ZNF521	0.968	1
ECHDC2	Del_3p21.2	0.968	1
EDIL3	GPR50	0.968	1
EDIL3	MYF6	0.968	1
EDIL3	NASP	0.968	1
EDIL3	NUDT11	0.968	1
EDIL3	RILPL1	0.968	1
EDIL3	RIMBP3	0.968	1
EDIL3	STXBP3	0.968	1
EDIL3	ZNF521	0.968	1
EDIL3	3p-Amp	0.968	1
GPR50	MYF6	0.968	1
GPR50	NASP	0.968	1
GPR50	NUDT11	0.968	1
GPR50	RILPL1	0.968	1
GPR50	RIMBP3	0.968	1
GPR50	STXBP3	0.968	1
GPR50	ZNF438	0.968	1
GPR50	ZNF521	0.968	1
KDM6A	20p-Amp	0.968	1
KIF16B	Del_3p21.2	0.968	1
KLK10	Del_3p21.2	0.968	1
MYF6	NASP	0.968	1
MYF6	NUDT11	0.968	1
MYF6	RILPL1	0.968	1
MYF6	STXBP3	0.968	1
MYF6	ZNF438	0.968	1
MYF6	ZNF521	0.968	1
NASP	NUDT11	0.968	1
NASP	RILPL1	0.968	1
NASP	RIMBP3	0.968	1
NASP	STXBP3	0.968	1
NASP	ZNF438	0.968	1
NASP	ZNF521	0.968	1
NUDT11	RILPL1	0.968	1
NUDT11	RIMBP3	0.968	1
NUDT11	STXBP3	0.968	1
NUDT11	ZNF438	0.968	1
NUDT11	ZNF521	0.968	1
PIK3CA	TP53	0.968	1
RILPL1	RIMBP3	0.968	1
RILPL1	STXBP3	0.968	1
RILPL1	ZNF438	0.968	1
RILPL1	ZNF521	0.968	1
RILPL1	3p-Amp	0.968	1
RIMBP3	STXBP3	0.968	1
RIMBP3	ZNF438	0.968	1
RIMBP3	ZNF521	0.968	1
SETD2	SYNE1	0.968	1
SLC6A14	21q-Del	0.968	1
STXBP3	ZNF438	0.968	1
STXBP3	ZNF521	0.968	1
VCL	Del_3p21.2	0.968	1
ZC3H3	21q-Del	0.968	1
ZNF438	ZNF521	0.968	1
16p-Amp	5p-Amp	0.968	1
Del_2q22.1	Del_4q34.3	0.968	1
Del_3p12.2	Del_11q23.1	0.968	1
ADAM28	NEFH	0.969	1
ADAM28	NFE2L2	0.969	1
ADAM28	PCF11	0.969	1
ALMS1	NF2	0.969	1
AR	NIPBL	0.969	1
AR	STAG2	0.969	1
AR	Amp_3q26.32	0.969	1
ARAP3	FGFR3	0.969	1
ARAP3	KRAS	0.969	1
ARAP3	NOM1	0.969	1
ARAP3	NTRK3	0.969	1
ARAP3	PODXL	0.969	1
ARAP3	SLC23A1	0.969	1
C16orf78	NEFH	0.969	1
C16orf78	NFE2L2	0.969	1
C16orf78	PCF11	0.969	1
C9orf171	NEFH	0.969	1
C9orf171	NFE2L2	0.969	1
C9orf171	PCF11	0.969	1
C9orf171	Amp_17q24.3	0.969	1
CARKD	NEFH	0.969	1
CARKD	NFE2L2	0.969	1
CARKD	PCF11	0.969	1
CDCA8	NEFH	0.969	1
CDCA8	NFE2L2	0.969	1
CDCA8	PCF11	0.969	1
CDK12	CDKN2A	0.969	1
CDK12	CXorf23	0.969	1
CDK12	DNAJA3	0.969	1
CDK12	ECHDC2	0.969	1
CDK12	HSPA2	0.969	1
CDK12	KIF16B	0.969	1
CDK12	KLK10	0.969	1
CDK12	PAM	0.969	1
CDK12	VCL	0.969	1
CDK12	ZNF532	0.969	1
CDKN2A	FAM178A	0.969	1
CDKN2A	GLS	0.969	1
CDKN2A	TXNIP	0.969	1
CDKN2A	WASL	0.969	1
CSK	FGFR3	0.969	1
CSK	KRAS	0.969	1
CSK	NOM1	0.969	1
CSK	NTRK3	0.969	1
CSK	PODXL	0.969	1
CSK	SLC23A1	0.969	1
CXorf23	FAM178A	0.969	1
CXorf23	GLS	0.969	1
CXorf23	TXNIP	0.969	1
CXorf23	WASL	0.969	1
CYP2C18	MET	0.969	1
CYP2C18	2q-Amp	0.969	1
DNAJA3	FAM178A	0.969	1
DNAJA3	GLS	0.969	1
DNAJA3	TXNIP	0.969	1
DNAJA3	WASL	0.969	1
DPYSL4	NEFH	0.969	1
DPYSL4	NFE2L2	0.969	1
DPYSL4	PCF11	0.969	1
ECHDC2	FAM178A	0.969	1
ECHDC2	GLS	0.969	1
ECHDC2	TXNIP	0.969	1
ECHDC2	WASL	0.969	1
EDIL3	17q-Amp	0.969	1
ENO1	FGFR3	0.969	1
ENO1	KRAS	0.969	1
ENO1	NOM1	0.969	1
ENO1	NTRK3	0.969	1
ENO1	PODXL	0.969	1
ENO1	SLC23A1	0.969	1
F2RL1	MET	0.969	1
F2RL1	2q-Amp	0.969	1
FAM178A	HSPA2	0.969	1
FAM178A	KIF16B	0.969	1
FAM178A	KLK10	0.969	1
FAM178A	PAM	0.969	1
FAM178A	VCL	0.969	1
FAM178A	ZNF532	0.969	1
FGFR3	FZR1	0.969	1
FGFR3	SLC6A14	0.969	1
FGFR3	TCEB1	0.969	1
FGFR3	TP53	0.969	1
FGFR3	ZC3H3	0.969	1
FGFR3	Amp_Xq11.2	0.969	1
FZR1	KRAS	0.969	1
FZR1	NOM1	0.969	1
FZR1	NTRK3	0.969	1
FZR1	SLC23A1	0.969	1
GLS	HSPA2	0.969	1
GLS	KIF16B	0.969	1
GLS	KLK10	0.969	1
GLS	PAM	0.969	1
GLS	VCL	0.969	1
GLS	ZNF532	0.969	1
HSPA2	TXNIP	0.969	1
HSPA2	WASL	0.969	1
IFNB1	MET	0.969	1
IFNB1	2q-Amp	0.969	1
IMPA2	NEFH	0.969	1
IMPA2	NFE2L2	0.969	1
IMPA2	PCF11	0.969	1
INPP5E	NEFH	0.969	1
INPP5E	NFE2L2	0.969	1
INPP5E	PCF11	0.969	1
INPP5E	Amp_17q24.3	0.969	1
KCNK1	MET	0.969	1
KCNK1	2q-Amp	0.969	1
KIF16B	TXNIP	0.969	1
KIF16B	WASL	0.969	1
KIF16B	12p-Amp	0.969	1
KLK10	TXNIP	0.969	1
KLK10	WASL	0.969	1
KRAS	SLC6A14	0.969	1
KRAS	TCEB1	0.969	1
KRAS	ZC3H3	0.969	1
KRAS	Amp_Xq11.2	0.969	1
MET	NDUFA3	0.969	1
MET	NKX2-1	0.969	1
MET	ONECUT2	0.969	1
MET	RALB	0.969	1
MET	RCN1	0.969	1
MET	RIN1	0.969	1
MET	RNF113B	0.969	1
MET	RNF144A	0.969	1
MET	SLC14A1	0.969	1
MET	TMEM47	0.969	1
MET	ZNHIT1	0.969	1
NDUFA3	2q-Amp	0.969	1
NEFH	NEK8	0.969	1
NEFH	OR10G3	0.969	1
NEFH	PDLIM4	0.969	1
NEFH	PRDX5	0.969	1
NEFH	PRODH	0.969	1
NEFH	SCYL1	0.969	1
NEFH	SLC1A7	0.969	1
NEFH	SPATA13	0.969	1
NEK8	NFE2L2	0.969	1
NEK8	PCF11	0.969	1
NEK8	Amp_17q24.3	0.969	1
NFE2L2	OR10G3	0.969	1
NFE2L2	PDLIM4	0.969	1
NFE2L2	PRDX5	0.969	1
NFE2L2	PRODH	0.969	1
NFE2L2	SCYL1	0.969	1
NFE2L2	SLC1A7	0.969	1
NFE2L2	SPATA13	0.969	1
NOM1	SLC6A14	0.969	1
NOM1	TCEB1	0.969	1
NOM1	ZC3H3	0.969	1
NOM1	Amp_Xq11.2	0.969	1
NTRK3	SLC6A14	0.969	1
NTRK3	TCEB1	0.969	1
NTRK3	TP53	0.969	1
NTRK3	ZC3H3	0.969	1
NTRK3	Amp_Xq11.2	0.969	1
ONECUT2	2q-Amp	0.969	1
OR10G3	PCF11	0.969	1
PAM	TXNIP	0.969	1
PAM	WASL	0.969	1
PCF11	PDLIM4	0.969	1
PCF11	PRDX5	0.969	1
PCF11	PRODH	0.969	1
PCF11	SCYL1	0.969	1
PCF11	SLC1A7	0.969	1
PCF11	SPATA13	0.969	1
PDLIM4	Amp_17q24.3	0.969	1
PODXL	SLC6A14	0.969	1
PODXL	TCEB1	0.969	1
PODXL	ZC3H3	0.969	1
PODXL	Amp_Xq11.2	0.969	1
RALB	2q-Amp	0.969	1
RCN1	2q-Amp	0.969	1
RIN1	2q-Amp	0.969	1
RNF113B	2q-Amp	0.969	1
RNF144A	2q-Amp	0.969	1
SLC23A1	SLC6A14	0.969	1
SLC23A1	TCEB1	0.969	1
SLC23A1	ZC3H3	0.969	1
SLC23A1	Amp_Xq11.2	0.969	1
SPATA13	Amp_17q24.3	0.969	1
TMEM47	2q-Amp	0.969	1
TXNIP	VCL	0.969	1
TXNIP	ZNF532	0.969	1
VCL	WASL	0.969	1
WASL	ZNF532	0.969	1
WDR52	17p-Del	0.969	1
ZNF438	17q-Amp	0.969	1
ZNF814	Del_16q23.3	0.969	1
ZNHIT1	2q-Amp	0.969	1
ARHGAP35	SYNE1	0.97	1
ATM	RAI1	0.97	1
DNMT3A	SMARCA4	0.97	1
DNMT3A	Amp_17q24.3	0.97	1
EGFR	SYNE1	0.97	1
GALNT7	5q-Amp	0.97	1
KDM6A	20q-Amp	0.97	1
NF2	SETD2	0.97	1
PRKAG2	SYNE1	0.97	1
5p-Amp	Amp_7q31.2	0.97	1
7q-Amp	21q-Del	0.97	1
Del_2q37.3	Del_3p12.2	0.97	1
ALMS1	PBRM1	0.971	1
BCLAF1	3q-Amp	0.971	1
BCLAF1	13q-Del	0.971	1
CDK12	Del_2q37.3	0.971	1
EGFR	Del_3p26.3	0.971	1
GALNT7	5p-Amp	0.971	1
KIF16B	12q-Amp	0.971	1
KIF16B	1p-Del	0.971	1
MET	12q-Amp	0.971	1
NF2	3q-Del	0.971	1
NF2	6q-Del	0.971	1
PARD6B	9q-Del	0.971	1
PCF11	17q-Amp	0.971	1
PTCH1	Del_3p26.3	0.971	1
WDR52	Del_6q26	0.971	1
ZFYVE26	2q-Amp	0.971	1
7p-Amp	21q-Del	0.971	1
21q-Del	Del_8p23.2	0.971	1
ACSF2	ADAM28	0.972	1
ACSF2	C16orf78	0.972	1
ACSF2	C9orf171	0.972	1
ACSF2	CARKD	0.972	1
ACSF2	CDCA8	0.972	1
ACSF2	DPYSL4	0.972	1
ACSF2	IMPA2	0.972	1
ACSF2	NEK8	0.972	1
ACSF2	OR10G3	0.972	1
ACSF2	PRDX5	0.972	1
ACSF2	PRODH	0.972	1
ACSF2	SCYL1	0.972	1
ACSF2	SLC1A7	0.972	1
ACSF2	SPATA13	0.972	1
ADAM28	DNMT3A	0.972	1
ADAM28	RAI1	0.972	1
ALMS1	AR	0.972	1
C16orf78	RAI1	0.972	1
C9orf171	DNMT3A	0.972	1
C9orf171	RAI1	0.972	1
CARKD	DNMT3A	0.972	1
CARKD	RAI1	0.972	1
CDCA8	DNMT3A	0.972	1
CDCA8	RAI1	0.972	1
CDKN2A	Del_8p23.2	0.972	1
CSK	13q-Del	0.972	1
DNMT3A	DPYSL4	0.972	1
DNMT3A	IMPA2	0.972	1
DNMT3A	INPP5E	0.972	1
DNMT3A	NEK8	0.972	1
DNMT3A	PDLIM4	0.972	1
DNMT3A	PRDX5	0.972	1
DNMT3A	PRODH	0.972	1
DNMT3A	SPATA13	0.972	1
DNMT3A	18p-Del	0.972	1
DPYSL4	RAI1	0.972	1
ECHDC2	Del_8p23.2	0.972	1
ECHDC2	Del_10q23.31	0.972	1
FZR1	3q-Amp	0.972	1
GLS	KDM5C	0.972	1
IMPA2	RAI1	0.972	1
INPP5E	RAI1	0.972	1
KIF16B	Del_8p23.2	0.972	1
KLK10	6p-Del	0.972	1
KLK10	Del_8p23.2	0.972	1
MTOR	VHL	0.972	1
NEK8	RAI1	0.972	1
NIPBL	Del_4q34.3	0.972	1
NTRK3	Del_4q34.3	0.972	1
OR10G3	RAI1	0.972	1
PBRM1	8p-Del	0.972	1
PDLIM4	RAI1	0.972	1
PODXL	Del_4q34.3	0.972	1
PRDX5	RAI1	0.972	1
PRODH	RAI1	0.972	1
RAI1	SCYL1	0.972	1
RAI1	SLC1A7	0.972	1
RAI1	SPATA13	0.972	1
SLC23A1	Del_4q34.3	0.972	1
TP53	Del_8p23.2	0.972	1
VCL	Del_10q23.31	0.972	1
VHL	3q-Del	0.972	1
ZC3H3	13q-Del	0.972	1
ARHGAP35	CDKN2A	0.973	1
ARHGAP35	CXorf23	0.973	1
ARHGAP35	DNAJA3	0.973	1
ARHGAP35	ECHDC2	0.973	1
ARHGAP35	HSPA2	0.973	1
ARHGAP35	KIF16B	0.973	1
ARHGAP35	KLK10	0.973	1
ARHGAP35	PAM	0.973	1
ARHGAP35	VCL	0.973	1
ARHGAP35	ZNF532	0.973	1
CDKN2A	CSF1R	0.973	1
CDKN2A	EGFR	0.973	1
CDKN2A	KIAA0922	0.973	1
CDKN2A	PRKAG2	0.973	1
CDKN2A	PTCH1	0.973	1
CSF1R	DNAJA3	0.973	1
CSF1R	ECHDC2	0.973	1
CSF1R	KIF16B	0.973	1
CSF1R	KLK10	0.973	1
CSF1R	PAM	0.973	1
CSF1R	VCL	0.973	1
CSF1R	ZNF532	0.973	1
CUL3	NF1	0.973	1
CXorf23	KIAA0922	0.973	1
CXorf23	PRKAG2	0.973	1
CXorf23	PTCH1	0.973	1
DNAJA3	EGFR	0.973	1
DNAJA3	KIAA0922	0.973	1
DNAJA3	PRKAG2	0.973	1
DNAJA3	PTCH1	0.973	1
ECHDC2	EGFR	0.973	1
ECHDC2	KIAA0922	0.973	1
ECHDC2	PRKAG2	0.973	1
ECHDC2	PTCH1	0.973	1
ECHDC2	Del_3p26.3	0.973	1
EGFR	HSPA2	0.973	1
EGFR	KIF16B	0.973	1
EGFR	KLK10	0.973	1
EGFR	PAM	0.973	1
EGFR	VCL	0.973	1
EGFR	ZNF532	0.973	1
FAM178A	Amp_2q32.1	0.973	1
HSPA2	KIAA0922	0.973	1
HSPA2	PRKAG2	0.973	1
KIAA0922	KIF16B	0.973	1
KIAA0922	KLK10	0.973	1
KIAA0922	PAM	0.973	1
KIAA0922	VCL	0.973	1
KIAA0922	ZNF532	0.973	1
KIF16B	PRKAG2	0.973	1
KIF16B	PTCH1	0.973	1
KIF16B	Del_3p26.3	0.973	1
KLK10	PRKAG2	0.973	1
KLK10	PTCH1	0.973	1
KLK10	Del_3p26.3	0.973	1
NF1	NF2	0.973	1
NF1	Del_16q23.3	0.973	1
NFE2L2	1p-Del	0.973	1
PAM	PRKAG2	0.973	1
PAM	PTCH1	0.973	1
PAM	20p-Amp	0.973	1
PARD6B	9p-Del	0.973	1
PCK1	Amp_7q31.2	0.973	1
PIK3CA	5q-Amp	0.973	1
PRKAG2	VCL	0.973	1
PRKAG2	ZNF532	0.973	1
PTCH1	VCL	0.973	1
PTCH1	ZNF532	0.973	1
PTEN	TXNIP	0.973	1
SETD2	SMARCB1	0.973	1
STAG2	5q-Amp	0.973	1
TP53	20p-Amp	0.973	1
VCL	Del_3p26.3	0.973	1
ADAM28	BCLAF1	0.974	1
ADAM28	EPS15L1	0.974	1
AR	Amp_7q31.2	0.974	1
ATM	CYP2C18	0.974	1
ATM	F2RL1	0.974	1
ATM	IFNB1	0.974	1
ATM	KCNK1	0.974	1
ATM	NDUFA3	0.974	1
ATM	NKX2-1	0.974	1
ATM	RALB	0.974	1
ATM	RCN1	0.974	1
ATM	RIN1	0.974	1
ATM	RNF113B	0.974	1
ATM	RNF144A	0.974	1
ATM	SLC14A1	0.974	1
ATM	TMEM47	0.974	1
ATM	ZNHIT1	0.974	1
BCLAF1	C16orf78	0.974	1
BCLAF1	C9orf171	0.974	1
BCLAF1	CARKD	0.974	1
BCLAF1	CDCA8	0.974	1
BCLAF1	DPYSL4	0.974	1
BCLAF1	IMPA2	0.974	1
BCLAF1	INPP5E	0.974	1
BCLAF1	NEK8	0.974	1
BCLAF1	OR10G3	0.974	1
BCLAF1	PDLIM4	0.974	1
BCLAF1	PRDX5	0.974	1
BCLAF1	PRODH	0.974	1
BCLAF1	SCYL1	0.974	1
BCLAF1	SLC1A7	0.974	1
C16orf78	EPS15L1	0.974	1
C9orf171	EPS15L1	0.974	1
CARKD	EPS15L1	0.974	1
CDCA8	EPS15L1	0.974	1
CDK12	8p-Del	0.974	1
CDK12	Del_9p23	0.974	1
CDKN2A	Del_9p21.3	0.974	1
CSK	Del_2q22.1	0.974	1
CYP2C18	FAT1	0.974	1
CYP2C18	SMARCA4	0.974	1
DNAJA3	Del_9p21.3	0.974	1
DPYSL4	EPS15L1	0.974	1
EDIL3	16p-Amp	0.974	1
ENO1	Del_2q22.1	0.974	1
EPS15L1	IMPA2	0.974	1
EPS15L1	INPP5E	0.974	1
EPS15L1	NEK8	0.974	1
EPS15L1	OR10G3	0.974	1
EPS15L1	PDLIM4	0.974	1
EPS15L1	PRDX5	0.974	1
EPS15L1	PRODH	0.974	1
EPS15L1	SCYL1	0.974	1
EPS15L1	SLC1A7	0.974	1
EPS15L1	SPATA13	0.974	1
EPS15L1	Del_1p31.1	0.974	1
F2RL1	FAT1	0.974	1
F2RL1	SMARCA4	0.974	1
FAM178A	Del_9p23	0.974	1
FAT1	IFNB1	0.974	1
FAT1	KCNK1	0.974	1
FAT1	NDUFA3	0.974	1
FAT1	NKX2-1	0.974	1
FAT1	ONECUT2	0.974	1
FAT1	RALB	0.974	1
FAT1	RCN1	0.974	1
FAT1	RIN1	0.974	1
FAT1	RNF113B	0.974	1
FAT1	RNF144A	0.974	1
FAT1	SLC14A1	0.974	1
FAT1	TMEM47	0.974	1
FAT1	ZNHIT1	0.974	1
GPR50	16p-Amp	0.974	1
IFNB1	SMARCA4	0.974	1
KCNK1	SMARCA4	0.974	1
MTOR	3p-Del	0.974	1
MYF6	16p-Amp	0.974	1
NDUFA3	SMARCA4	0.974	1
NIPBL	9q-Del	0.974	1
NKX2-1	SMARCA4	0.974	1
NOM1	3p-Del	0.974	1
ONECUT2	SMARCA4	0.974	1
PAM	20q-Amp	0.974	1
PIK3CA	5p-Amp	0.974	1
PIK3CA	Amp_5q35.1	0.974	1
RALB	SMARCA4	0.974	1
RCN1	SMARCA4	0.974	1
RIN1	SMARCA4	0.974	1
RNF113B	SMARCA4	0.974	1
RNF144A	SMARCA4	0.974	1
SLC14A1	SMARCA4	0.974	1
SLC23A1	Amp_5q35.1	0.974	1
SLC6A14	Del_2q22.1	0.974	1
SMARCA4	TMEM47	0.974	1
SMARCA4	ZNHIT1	0.974	1
STAG2	5p-Amp	0.974	1
STAG2	9q-Del	0.974	1
VCL	Del_9p21.3	0.974	1
VHL	5q-Amp	0.974	1
ZNF438	16p-Amp	0.974	1
ZNF521	16p-Amp	0.974	1
5q-Amp	7q-Amp	0.974	1
6p-Del	Del_3p12.2	0.974	1
Amp_Xq11.2	Del_2q22.1	0.974	1
ARAP3	ARHGAP33	0.975	1
ARAP3	BRAF	0.975	1
ARAP3	EDIL3	0.975	1
ARAP3	GPR50	0.975	1
ARAP3	MYF6	0.975	1
ARAP3	NASP	0.975	1
ARAP3	NUDT11	0.975	1
ARAP3	RILPL1	0.975	1
ARAP3	RIMBP3	0.975	1
ARAP3	STXBP3	0.975	1
ARAP3	ZNF438	0.975	1
ARAP3	ZNF521	0.975	1
ARAP3	18q-Del	0.975	1
ARHGAP33	CSK	0.975	1
ARHGAP33	ENO1	0.975	1
ARHGAP33	FZR1	0.975	1
ARHGAP33	SLC6A14	0.975	1
ARHGAP33	TCEB1	0.975	1
ARHGAP33	ZC3H3	0.975	1
ARHGAP33	Amp_Xq11.2	0.975	1
ARHGAP35	Del_11q23.1	0.975	1
ATM	EPS15L1	0.975	1
BCLAF1	FAT1	0.975	1
BCLAF1	18q-Del	0.975	1
BRAF	CSK	0.975	1
BRAF	ENO1	0.975	1
BRAF	FZR1	0.975	1
BRAF	SLC6A14	0.975	1
BRAF	TCEB1	0.975	1
BRAF	ZC3H3	0.975	1
BRAF	Amp_Xq11.2	0.975	1
C9orf171	17q-Amp	0.975	1
CSK	EDIL3	0.975	1
CSK	GPR50	0.975	1
CSK	MYF6	0.975	1
CSK	NASP	0.975	1
CSK	NUDT11	0.975	1
CSK	RILPL1	0.975	1
CSK	RIMBP3	0.975	1
CSK	STXBP3	0.975	1
CSK	ZNF438	0.975	1
CSK	ZNF521	0.975	1
ECHDC2	10q-Del	0.975	1
EDIL3	ENO1	0.975	1
EDIL3	FZR1	0.975	1
EDIL3	SLC6A14	0.975	1
EDIL3	TCEB1	0.975	1
EDIL3	ZC3H3	0.975	1
EDIL3	17p-Amp	0.975	1
EDIL3	Amp_Xq11.2	0.975	1
ENO1	MYF6	0.975	1
ENO1	NASP	0.975	1
ENO1	NUDT11	0.975	1
ENO1	RILPL1	0.975	1
ENO1	RIMBP3	0.975	1
ENO1	STXBP3	0.975	1
ENO1	ZNF438	0.975	1
ENO1	ZNF521	0.975	1
ENO1	18q-Del	0.975	1
EPS15L1	18q-Del	0.975	1
FZR1	GPR50	0.975	1
FZR1	NASP	0.975	1
FZR1	NUDT11	0.975	1
FZR1	RILPL1	0.975	1
FZR1	RIMBP3	0.975	1
FZR1	STXBP3	0.975	1
FZR1	ZNF438	0.975	1
FZR1	ZNF521	0.975	1
GPR50	SLC6A14	0.975	1
GPR50	TCEB1	0.975	1
GPR50	ZC3H3	0.975	1
GPR50	Amp_Xq11.2	0.975	1
INPP5E	17q-Amp	0.975	1
KDM6A	16q-Amp	0.975	1
MTOR	SLC23A1	0.975	1
MYF6	SLC6A14	0.975	1
MYF6	TCEB1	0.975	1
NASP	SLC6A14	0.975	1
NASP	TCEB1	0.975	1
NASP	ZC3H3	0.975	1
NASP	Amp_Xq11.2	0.975	1
NEK8	17q-Amp	0.975	1
NF1	Del_3p21.2	0.975	1
NF2	SYNE1	0.975	1
NUDT11	SLC6A14	0.975	1
NUDT11	TCEB1	0.975	1
NUDT11	ZC3H3	0.975	1
NUDT11	Amp_Xq11.2	0.975	1
PDLIM4	17q-Amp	0.975	1
RILPL1	SLC6A14	0.975	1
RILPL1	TCEB1	0.975	1
RILPL1	ZC3H3	0.975	1
RILPL1	Amp_Xq11.2	0.975	1
RIMBP3	SLC6A14	0.975	1
RIMBP3	TCEB1	0.975	1
RIMBP3	Amp_Xq11.2	0.975	1
SLC23A1	3q-Del	0.975	1
SLC6A14	STXBP3	0.975	1
SLC6A14	ZNF438	0.975	1
SLC6A14	ZNF521	0.975	1
SPATA13	17q-Amp	0.975	1
STXBP3	TCEB1	0.975	1
STXBP3	ZC3H3	0.975	1
STXBP3	Amp_Xq11.2	0.975	1
TCEB1	ZNF438	0.975	1
TCEB1	ZNF521	0.975	1
TP53	20q-Amp	0.975	1
TP53	9q-Del	0.975	1
VCL	10q-Del	0.975	1
ZC3H3	ZNF438	0.975	1
ZC3H3	ZNF521	0.975	1
ZC3H3	18q-Del	0.975	1
ZNF438	17p-Amp	0.975	1
ZNF438	Amp_Xq11.2	0.975	1
ZNF521	Amp_Xq11.2	0.975	1
18q-Del	Amp_Xq11.2	0.975	1
ARHGAP35	PBRM1	0.976	1
CACNA1C	NF1	0.976	1
CACNA1C	3q-Del	0.976	1
CDK12	Amp_3q26.32	0.976	1
FAM178A	Amp_3q26.32	0.976	1
FAT1	Del_9p23	0.976	1
KDM6A	NIPBL	0.976	1
KDM6A	STAG2	0.976	1
NF1	NIPBL	0.976	1
NFE2L2	20p-Amp	0.976	1
NIPBL	9p-Del	0.976	1
PCK1	7q-Amp	0.976	1
SETD2	STAG2	0.976	1
STAG2	9p-Del	0.976	1
SYNE1	Del_1p36.31	0.976	1
12p-Amp	5p-Amp	0.976	1
16p-Amp	21q-Del	0.976	1
3q-Del	Del_1q44	0.976	1
ADAM28	ADCY8	0.977	1
ADAM28	GALNT7	0.977	1
ADAM28	PARD6B	0.977	1
ADAM28	PCK1	0.977	1
ADAM28	SMARCB1	0.977	1
ADAM28	WDR52	0.977	1
ADAM28	ZFYVE26	0.977	1
ADCY8	C16orf78	0.977	1
ADCY8	C9orf171	0.977	1
ADCY8	CARKD	0.977	1
ADCY8	CDCA8	0.977	1
ADCY8	DPYSL4	0.977	1
ADCY8	IMPA2	0.977	1
ADCY8	INPP5E	0.977	1
ADCY8	PDLIM4	0.977	1
ADCY8	PRDX5	0.977	1
ADCY8	PRODH	0.977	1
ADCY8	SCYL1	0.977	1
ADCY8	SLC1A7	0.977	1
ADCY8	SPATA13	0.977	1
ARHGAP33	Del_6q26	0.977	1
ARHGAP35	Del_9p21.3	0.977	1
ARID1A	CYP2C18	0.977	1
ARID1A	F2RL1	0.977	1
ARID1A	IFNB1	0.977	1
ARID1A	KCNK1	0.977	1
ARID1A	NKX2-1	0.977	1
ARID1A	ONECUT2	0.977	1
ARID1A	RALB	0.977	1
ARID1A	RCN1	0.977	1
ARID1A	RIN1	0.977	1
ARID1A	RNF113B	0.977	1
ARID1A	RNF144A	0.977	1
ARID1A	SLC14A1	0.977	1
ARID1A	TMEM47	0.977	1
ARID1A	ZNHIT1	0.977	1
C16orf78	GALNT7	0.977	1
C16orf78	PARD6B	0.977	1
C16orf78	PCK1	0.977	1
C16orf78	SMARCB1	0.977	1
C16orf78	WDR52	0.977	1
C16orf78	ZFYVE26	0.977	1
C9orf171	GALNT7	0.977	1
C9orf171	PARD6B	0.977	1
C9orf171	PCK1	0.977	1
C9orf171	SMARCB1	0.977	1
C9orf171	WDR52	0.977	1
C9orf171	ZFYVE26	0.977	1
CARKD	GALNT7	0.977	1
CARKD	PARD6B	0.977	1
CARKD	PCK1	0.977	1
CARKD	SMARCB1	0.977	1
CARKD	WDR52	0.977	1
CARKD	ZFYVE26	0.977	1
CDCA8	GALNT7	0.977	1
CDCA8	PARD6B	0.977	1
CDCA8	PCK1	0.977	1
CDCA8	SMARCB1	0.977	1
CDCA8	WDR52	0.977	1
CDCA8	ZFYVE26	0.977	1
CDK12	MET	0.977	1
CDKN2A	FGFR3	0.977	1
CDKN2A	KRAS	0.977	1
CDKN2A	NOM1	0.977	1
CDKN2A	NTRK3	0.977	1
CDKN2A	PODXL	0.977	1
CDKN2A	SLC23A1	0.977	1
CXorf23	FGFR3	0.977	1
CXorf23	KRAS	0.977	1
CXorf23	NOM1	0.977	1
CXorf23	NTRK3	0.977	1
CXorf23	PODXL	0.977	1
CXorf23	SLC23A1	0.977	1
DNAJA3	FGFR3	0.977	1
DNAJA3	NOM1	0.977	1
DNAJA3	NTRK3	0.977	1
DNAJA3	SLC23A1	0.977	1
DPYSL4	GALNT7	0.977	1
DPYSL4	PCK1	0.977	1
DPYSL4	SMARCB1	0.977	1
DPYSL4	WDR52	0.977	1
DPYSL4	ZFYVE26	0.977	1
ECHDC2	FGFR3	0.977	1
ECHDC2	KRAS	0.977	1
ECHDC2	NOM1	0.977	1
ECHDC2	NTRK3	0.977	1
ECHDC2	PODXL	0.977	1
FAM178A	MET	0.977	1
FAM178A	2q-Amp	0.977	1
FGFR3	HSPA2	0.977	1
FGFR3	KIF16B	0.977	1
FGFR3	KLK10	0.977	1
FGFR3	PAM	0.977	1
FGFR3	VCL	0.977	1
FGFR3	ZNF532	0.977	1
GALNT7	IMPA2	0.977	1
GALNT7	INPP5E	0.977	1
GALNT7	NEK8	0.977	1
GALNT7	OR10G3	0.977	1
GALNT7	PDLIM4	0.977	1
GALNT7	PRDX5	0.977	1
GALNT7	SCYL1	0.977	1
GALNT7	SPATA13	0.977	1
GPR50	Del_6q26	0.977	1
HSPA2	KRAS	0.977	1
HSPA2	NOM1	0.977	1
HSPA2	NTRK3	0.977	1
HSPA2	PODXL	0.977	1
HSPA2	SLC23A1	0.977	1
IMPA2	PARD6B	0.977	1
IMPA2	PCK1	0.977	1
IMPA2	SMARCB1	0.977	1
IMPA2	WDR52	0.977	1
IMPA2	ZFYVE26	0.977	1
INPP5E	PARD6B	0.977	1
INPP5E	SMARCB1	0.977	1
INPP5E	WDR52	0.977	1
INPP5E	ZFYVE26	0.977	1
KIF16B	KRAS	0.977	1
KIF16B	NOM1	0.977	1
KIF16B	NTRK3	0.977	1
KIF16B	PODXL	0.977	1
KIF16B	SLC23A1	0.977	1
KLK10	KRAS	0.977	1
KLK10	NOM1	0.977	1
KLK10	NTRK3	0.977	1
KLK10	PODXL	0.977	1
KLK10	SLC23A1	0.977	1
KRAS	PAM	0.977	1
KRAS	VCL	0.977	1
KRAS	ZNF532	0.977	1
NEFH	NF2	0.977	1
NEK8	PARD6B	0.977	1
NEK8	PCK1	0.977	1
NEK8	SMARCB1	0.977	1
NEK8	WDR52	0.977	1
NEK8	ZFYVE26	0.977	1
NF2	NFE2L2	0.977	1
NFE2L2	20q-Amp	0.977	1
NFE2L2	Del_16q23.3	0.977	1
NOM1	PAM	0.977	1
NOM1	VCL	0.977	1
NOM1	ZNF532	0.977	1
NTRK3	PAM	0.977	1
NTRK3	VCL	0.977	1
NTRK3	ZNF532	0.977	1
OR10G3	PARD6B	0.977	1
OR10G3	PCK1	0.977	1
OR10G3	SMARCB1	0.977	1
OR10G3	WDR52	0.977	1
OR10G3	ZFYVE26	0.977	1
PAM	PODXL	0.977	1
PAM	SLC23A1	0.977	1
PARD6B	PDLIM4	0.977	1
PARD6B	PRDX5	0.977	1
PARD6B	PRODH	0.977	1
PARD6B	SCYL1	0.977	1
PARD6B	SLC1A7	0.977	1
PARD6B	SPATA13	0.977	1
PCK1	PRDX5	0.977	1
PCK1	PRODH	0.977	1
PCK1	SCYL1	0.977	1
PCK1	SLC1A7	0.977	1
PCK1	SPATA13	0.977	1
PCK1	7p-Amp	0.977	1
PDLIM4	SMARCB1	0.977	1
PDLIM4	WDR52	0.977	1
PDLIM4	ZFYVE26	0.977	1
PODXL	VCL	0.977	1
PODXL	ZNF532	0.977	1
PODXL	6q-Del	0.977	1
PRDX5	SMARCB1	0.977	1
PRDX5	WDR52	0.977	1
PRDX5	ZFYVE26	0.977	1
PRODH	WDR52	0.977	1
PRODH	ZFYVE26	0.977	1
PTEN	3q-Del	0.977	1
PTEN	Del_6q26	0.977	1
SCYL1	SMARCB1	0.977	1
SCYL1	WDR52	0.977	1
SCYL1	ZFYVE26	0.977	1
SLC1A7	WDR52	0.977	1
SLC1A7	ZFYVE26	0.977	1
SLC23A1	VCL	0.977	1
SMARCB1	SPATA13	0.977	1
SPATA13	WDR52	0.977	1
SPATA13	ZFYVE26	0.977	1
SYNE1	6q-Del	0.977	1
TP53	9p-Del	0.977	1
18q-Del	3q-Del	0.977	1
ACSF2	12p-Amp	0.978	1
ARAP3	18p-Del	0.978	1
ARHGAP35	KDM5C	0.978	1
BCLAF1	18p-Del	0.978	1
C9orf171	16p-Amp	0.978	1
C9orf171	17p-Amp	0.978	1
CARKD	16p-Amp	0.978	1
EDIL3	16q-Amp	0.978	1
ENO1	18p-Del	0.978	1
FAM178A	17p-Del	0.978	1
FGFR3	SYNE1	0.978	1
FZR1	18p-Del	0.978	1
GPR50	16q-Amp	0.978	1
INPP5E	17p-Amp	0.978	1
KDM5C	PRKAG2	0.978	1
KDM5C	PTCH1	0.978	1
MYF6	16q-Amp	0.978	1
NEK8	16p-Amp	0.978	1
NEK8	17p-Amp	0.978	1
NF1	TP53	0.978	1
NF1	Del_3p12.2	0.978	1
NF2	16p-Amp	0.978	1
NFE2L2	Del_9p21.3	0.978	1
NTRK3	SYNE1	0.978	1
PDLIM4	16p-Amp	0.978	1
PDLIM4	17p-Amp	0.978	1
SLC23A1	SYNE1	0.978	1
SLC23A1	Amp_7q31.2	0.978	1
SMARCB1	3q-Amp	0.978	1
SMARCB1	Del_14q31.1	0.978	1
SPATA13	17p-Amp	0.978	1
SYNE1	13q-Del	0.978	1
ZC3H3	18p-Del	0.978	1
ZNF438	16q-Amp	0.978	1
5p-Amp	7q-Amp	0.978	1
10q-Del	18q-Del	0.978	1
18p-Del	Amp_Xq11.2	0.978	1
18q-Del	Del_3p21.2	0.978	1
21q-Del	Del_9p21.3	0.978	1
ALMS1	KDM6A	0.979	1
ALMS1	NF1	0.979	1
ARHGAP33	TP53	0.979	1
C16orf78	Del_6q26	0.979	1
CDKN2A	8p-Del	0.979	1
CUL3	CYP2C18	0.979	1
CUL3	F2RL1	0.979	1
CUL3	IFNB1	0.979	1
CUL3	KCNK1	0.979	1
CUL3	NDUFA3	0.979	1
CUL3	NKX2-1	0.979	1
CUL3	ONECUT2	0.979	1
CUL3	RALB	0.979	1
CUL3	RCN1	0.979	1
CUL3	RIN1	0.979	1
CUL3	RNF113B	0.979	1
CUL3	RNF144A	0.979	1
CUL3	SLC14A1	0.979	1
CUL3	TMEM47	0.979	1
CUL3	ZNHIT1	0.979	1
CYP2C18	NF2	0.979	1
CYP2C18	Del_16q23.3	0.979	1
DPYSL4	Del_6q26	0.979	1
ECHDC2	8p-Del	0.979	1
F2RL1	NF2	0.979	1
F2RL1	Del_16q23.3	0.979	1
FAM178A	16p-Amp	0.979	1
FAT1	MET	0.979	1
FAT1	16p-Amp	0.979	1
FZR1	PBRM1	0.979	1
GPR50	TP53	0.979	1
IFNB1	NF2	0.979	1
IFNB1	Del_16q23.3	0.979	1
KCNK1	NF2	0.979	1
KCNK1	Del_16q23.3	0.979	1
KIF16B	8p-Del	0.979	1
NASP	TP53	0.979	1
NDUFA3	NF2	0.979	1
NDUFA3	Del_16q23.3	0.979	1
NF2	NKX2-1	0.979	1
NF2	ONECUT2	0.979	1
NF2	RALB	0.979	1
NF2	RCN1	0.979	1
NF2	RIN1	0.979	1
NF2	RNF113B	0.979	1
NF2	RNF144A	0.979	1
NF2	SLC14A1	0.979	1
NF2	TMEM47	0.979	1
NF2	ZNHIT1	0.979	1
NKX2-1	Del_16q23.3	0.979	1
ONECUT2	Del_16q23.3	0.979	1
PBRM1	ZC3H3	0.979	1
PRODH	Del_6q26	0.979	1
RALB	Del_16q23.3	0.979	1
RCN1	Del_16q23.3	0.979	1
RIMBP3	TP53	0.979	1
RIN1	Del_16q23.3	0.979	1
RNF113B	Del_16q23.3	0.979	1
RNF144A	Del_16q23.3	0.979	1
SETD2	Del_11q23.1	0.979	1
SLC14A1	Del_16q23.3	0.979	1
SLC1A7	Del_6q26	0.979	1
TMEM47	Del_16q23.3	0.979	1
TP53	ZNF521	0.979	1
TXNIP	5q-Amp	0.979	1
VCL	Del_9p23	0.979	1
ZNHIT1	Del_16q23.3	0.979	1
18p-Del	Del_8p23.2	0.979	1
Del_3p26.3	Del_4q34.3	0.979	1
ADAM28	CDK12	0.98	1
ADAM28	FAM178A	0.98	1
ADAM28	GLS	0.98	1
ADAM28	TXNIP	0.98	1
ADAM28	WASL	0.98	1
ADCY8	SMARCA4	0.98	1
ARAP3	CSK	0.98	1
ARAP3	ENO1	0.98	1
ARAP3	FZR1	0.98	1
ARAP3	SLC6A14	0.98	1
ARAP3	TCEB1	0.98	1
ARAP3	ZC3H3	0.98	1
ARAP3	Amp_Xq11.2	0.98	1
ARHGAP35	Amp_2q32.1	0.98	1
ARID1A	BCLAF1	0.98	1
ARID1A	VHL	0.98	1
ATM	SMARCB1	0.98	1
ATM	WDR52	0.98	1
ATM	ZFYVE26	0.98	1
C16orf78	CDK12	0.98	1
C16orf78	FAM178A	0.98	1
C16orf78	GLS	0.98	1
C16orf78	TXNIP	0.98	1
C16orf78	WASL	0.98	1
C9orf171	CDK12	0.98	1
C9orf171	FAM178A	0.98	1
C9orf171	GLS	0.98	1
C9orf171	TXNIP	0.98	1
C9orf171	WASL	0.98	1
CARKD	FAM178A	0.98	1
CARKD	GLS	0.98	1
CARKD	TXNIP	0.98	1
CARKD	WASL	0.98	1
CDCA8	CDK12	0.98	1
CDCA8	FAM178A	0.98	1
CDCA8	GLS	0.98	1
CDCA8	TXNIP	0.98	1
CDCA8	WASL	0.98	1
CDK12	DPYSL4	0.98	1
CDK12	IMPA2	0.98	1
CDK12	INPP5E	0.98	1
CDK12	NEK8	0.98	1
CDK12	OR10G3	0.98	1
CDK12	PDLIM4	0.98	1
CDK12	PRDX5	0.98	1
CDK12	PRODH	0.98	1
CDK12	SCYL1	0.98	1
CDK12	SLC1A7	0.98	1
CDK12	SPATA13	0.98	1
CDK12	9q-Del	0.98	1
CDKN2A	Amp_3q26.32	0.98	1
CSK	ENO1	0.98	1
CSK	FZR1	0.98	1
CSK	SLC6A14	0.98	1
CSK	TCEB1	0.98	1
CSK	ZC3H3	0.98	1
CSK	Amp_Xq11.2	0.98	1
DNMT3A	17q-Amp	0.98	1
DPYSL4	FAM178A	0.98	1
DPYSL4	GLS	0.98	1
DPYSL4	TXNIP	0.98	1
DPYSL4	WASL	0.98	1
ENO1	FZR1	0.98	1
ENO1	SLC6A14	0.98	1
ENO1	TCEB1	0.98	1
ENO1	ZC3H3	0.98	1
ENO1	3p-Amp	0.98	1
ENO1	Amp_Xq11.2	0.98	1
FAM178A	IMPA2	0.98	1
FAM178A	NEK8	0.98	1
FAM178A	OR10G3	0.98	1
FAM178A	PRDX5	0.98	1
FAM178A	PRODH	0.98	1
FAM178A	SCYL1	0.98	1
FAM178A	SLC1A7	0.98	1
FAM178A	SPATA13	0.98	1
FAM178A	9q-Del	0.98	1
FZR1	SLC6A14	0.98	1
FZR1	TCEB1	0.98	1
FZR1	ZC3H3	0.98	1
GLS	IMPA2	0.98	1
GLS	INPP5E	0.98	1
GLS	NEK8	0.98	1
GLS	OR10G3	0.98	1
GLS	PDLIM4	0.98	1
GLS	PRDX5	0.98	1
GLS	PRODH	0.98	1
GLS	SCYL1	0.98	1
GLS	SLC1A7	0.98	1
GLS	SPATA13	0.98	1
IMPA2	TXNIP	0.98	1
IMPA2	WASL	0.98	1
INPP5E	TXNIP	0.98	1
INPP5E	WASL	0.98	1
MTOR	Del_3p14.1	0.98	1
NEK8	TXNIP	0.98	1
NEK8	WASL	0.98	1
NF1	Del_3p14.1	0.98	1
NFE2L2	STAG2	0.98	1
OR10G3	TXNIP	0.98	1
OR10G3	WASL	0.98	1
PARD6B	SMARCA4	0.98	1
PCF11	PIK3CA	0.98	1
PCK1	SMARCA4	0.98	1
PDLIM4	TXNIP	0.98	1
PDLIM4	WASL	0.98	1
PRDX5	TXNIP	0.98	1
PRDX5	WASL	0.98	1
PRODH	TXNIP	0.98	1
SCYL1	TXNIP	0.98	1
SCYL1	WASL	0.98	1
SLC1A7	TXNIP	0.98	1
SLC23A1	7p-Amp	0.98	1
SLC23A1	7q-Amp	0.98	1
SLC6A14	TCEB1	0.98	1
SLC6A14	ZC3H3	0.98	1
SLC6A14	Amp_Xq11.2	0.98	1
SMARCA4	ZFYVE26	0.98	1
SPATA13	TXNIP	0.98	1
SPATA13	WASL	0.98	1
STAG2	SYNE1	0.98	1
TCEB1	ZC3H3	0.98	1
TCEB1	Amp_Xq11.2	0.98	1
TXNIP	5p-Amp	0.98	1
ZC3H3	Amp_Xq11.2	0.98	1
ZNF814	5p-Amp	0.98	1
Amp_2q32.1	Del_9p23	0.98	1
ACSF2	12q-Amp	0.981	1
AR	CYP2C18	0.981	1
AR	F2RL1	0.981	1
AR	IFNB1	0.981	1
AR	KCNK1	0.981	1
AR	NDUFA3	0.981	1
AR	NKX2-1	0.981	1
AR	ONECUT2	0.981	1
AR	RALB	0.981	1
AR	RCN1	0.981	1
AR	RIN1	0.981	1
AR	RNF113B	0.981	1
AR	RNF144A	0.981	1
AR	SLC14A1	0.981	1
AR	TMEM47	0.981	1
AR	ZNHIT1	0.981	1
ARHGAP33	CDKN2A	0.981	1
ARHGAP33	CXorf23	0.981	1
ARHGAP33	DNAJA3	0.981	1
ARHGAP33	ECHDC2	0.981	1
ARHGAP33	HSPA2	0.981	1
ARHGAP33	KIF16B	0.981	1
ARHGAP33	KLK10	0.981	1
ARHGAP33	PAM	0.981	1
ARHGAP33	VCL	0.981	1
ARHGAP33	ZNF532	0.981	1
ARHGAP33	Del_4q34.3	0.981	1
BRAF	CDKN2A	0.981	1
BRAF	CXorf23	0.981	1
BRAF	DNAJA3	0.981	1
BRAF	ECHDC2	0.981	1
BRAF	HSPA2	0.981	1
BRAF	KIF16B	0.981	1
BRAF	KLK10	0.981	1
BRAF	PAM	0.981	1
BRAF	VCL	0.981	1
BRAF	ZNF532	0.981	1
C9orf171	16q-Amp	0.981	1
CACNA1C	CYP2C18	0.981	1
CACNA1C	F2RL1	0.981	1
CACNA1C	IFNB1	0.981	1
CACNA1C	KCNK1	0.981	1
CACNA1C	NDUFA3	0.981	1
CACNA1C	NKX2-1	0.981	1
CACNA1C	ONECUT2	0.981	1
CACNA1C	RALB	0.981	1
CACNA1C	RCN1	0.981	1
CACNA1C	RIN1	0.981	1
CACNA1C	RNF113B	0.981	1
CACNA1C	RNF144A	0.981	1
CACNA1C	SLC14A1	0.981	1
CACNA1C	TMEM47	0.981	1
CACNA1C	ZNHIT1	0.981	1
CARKD	16q-Amp	0.981	1
CDCA8	Del_1p36.31	0.981	1
CDK12	9p-Del	0.981	1
CDKN2A	EDIL3	0.981	1
CDKN2A	GPR50	0.981	1
CDKN2A	MYF6	0.981	1
CDKN2A	NASP	0.981	1
CDKN2A	NUDT11	0.981	1
CDKN2A	RILPL1	0.981	1
CDKN2A	RIMBP3	0.981	1
CDKN2A	STXBP3	0.981	1
CDKN2A	ZNF438	0.981	1
CDKN2A	ZNF521	0.981	1
CXorf23	EDIL3	0.981	1
CXorf23	GPR50	0.981	1
CXorf23	MYF6	0.981	1
CXorf23	NASP	0.981	1
CXorf23	NUDT11	0.981	1
CXorf23	RILPL1	0.981	1
CXorf23	RIMBP3	0.981	1
CXorf23	STXBP3	0.981	1
CXorf23	ZNF438	0.981	1
CXorf23	ZNF521	0.981	1
CYP2C18	NIPBL	0.981	1
CYP2C18	PIK3CA	0.981	1
CYP2C18	STAG2	0.981	1
DNAJA3	EDIL3	0.981	1
DNAJA3	GPR50	0.981	1
DNAJA3	MYF6	0.981	1
DNAJA3	NASP	0.981	1
DNAJA3	NUDT11	0.981	1
DNAJA3	RILPL1	0.981	1
DNAJA3	RIMBP3	0.981	1
DNAJA3	STXBP3	0.981	1
DNAJA3	ZNF438	0.981	1
DNAJA3	ZNF521	0.981	1
DNMT3A	12q-Amp	0.981	1
DPYSL4	Del_1p36.31	0.981	1
ECHDC2	EDIL3	0.981	1
ECHDC2	GPR50	0.981	1
ECHDC2	MYF6	0.981	1
ECHDC2	NASP	0.981	1
ECHDC2	NUDT11	0.981	1
ECHDC2	RILPL1	0.981	1
ECHDC2	STXBP3	0.981	1
ECHDC2	ZNF438	0.981	1
ECHDC2	ZNF521	0.981	1
EDIL3	HSPA2	0.981	1
EDIL3	KIF16B	0.981	1
EDIL3	KLK10	0.981	1
EDIL3	PAM	0.981	1
EDIL3	VCL	0.981	1
EDIL3	ZNF532	0.981	1
EGFR	Del_2q37.3	0.981	1
F2RL1	NIPBL	0.981	1
F2RL1	STAG2	0.981	1
FAM178A	SETD2	0.981	1
FAM178A	9p-Del	0.981	1
GPR50	HSPA2	0.981	1
GPR50	KIF16B	0.981	1
GPR50	KLK10	0.981	1
GPR50	PAM	0.981	1
GPR50	VCL	0.981	1
GPR50	ZNF532	0.981	1
HSPA2	MYF6	0.981	1
HSPA2	NASP	0.981	1
HSPA2	NUDT11	0.981	1
HSPA2	RILPL1	0.981	1
HSPA2	RIMBP3	0.981	1
HSPA2	STXBP3	0.981	1
HSPA2	ZNF438	0.981	1
HSPA2	ZNF521	0.981	1
IFNB1	NIPBL	0.981	1
IFNB1	PIK3CA	0.981	1
IFNB1	STAG2	0.981	1
IMPA2	Del_1p36.31	0.981	1
KCNK1	NIPBL	0.981	1
KCNK1	PIK3CA	0.981	1
KCNK1	STAG2	0.981	1
KDM5C	Del_3p12.2	0.981	1
KDM6A	Amp_3q26.32	0.981	1
KDM6A	Del_4q34.3	0.981	1
KIF16B	MYF6	0.981	1
KIF16B	NASP	0.981	1
KIF16B	NUDT11	0.981	1
KIF16B	RILPL1	0.981	1
KIF16B	RIMBP3	0.981	1
KIF16B	STXBP3	0.981	1
KIF16B	ZNF438	0.981	1
KIF16B	ZNF521	0.981	1
KLK10	MYF6	0.981	1
KLK10	NASP	0.981	1
KLK10	NUDT11	0.981	1
KLK10	RILPL1	0.981	1
KLK10	RIMBP3	0.981	1
KLK10	STXBP3	0.981	1
KLK10	ZNF438	0.981	1
KLK10	ZNF521	0.981	1
MYF6	PAM	0.981	1
MYF6	VCL	0.981	1
MYF6	ZNF532	0.981	1
NASP	PAM	0.981	1
NASP	VCL	0.981	1
NASP	ZNF532	0.981	1
NDUFA3	NIPBL	0.981	1
NDUFA3	PIK3CA	0.981	1
NDUFA3	STAG2	0.981	1
NEK8	16q-Amp	0.981	1
NF1	Amp_3q26.32	0.981	1
NF1	Del_4q34.3	0.981	1
NIPBL	NKX2-1	0.981	1
NIPBL	ONECUT2	0.981	1
NIPBL	RALB	0.981	1
NIPBL	RCN1	0.981	1
NIPBL	RIN1	0.981	1
NIPBL	RNF113B	0.981	1
NIPBL	RNF144A	0.981	1
NIPBL	SLC14A1	0.981	1
NIPBL	TMEM47	0.981	1
NIPBL	ZNHIT1	0.981	1
NKX2-1	PIK3CA	0.981	1
NKX2-1	STAG2	0.981	1
NUDT11	PAM	0.981	1
NUDT11	VCL	0.981	1
NUDT11	ZNF532	0.981	1
ONECUT2	PIK3CA	0.981	1
ONECUT2	STAG2	0.981	1
PAM	RILPL1	0.981	1
PAM	RIMBP3	0.981	1
PAM	STXBP3	0.981	1
PAM	ZNF438	0.981	1
PAM	ZNF521	0.981	1
PARD6B	18q-Del	0.981	1
PDLIM4	16q-Amp	0.981	1
PIK3CA	RALB	0.981	1
PIK3CA	RCN1	0.981	1
PIK3CA	RIN1	0.981	1
PIK3CA	RNF113B	0.981	1
PIK3CA	RNF144A	0.981	1
PIK3CA	SLC14A1	0.981	1
PIK3CA	TMEM47	0.981	1
PIK3CA	ZNHIT1	0.981	1
RALB	STAG2	0.981	1
RCN1	STAG2	0.981	1
RILPL1	VCL	0.981	1
RILPL1	ZNF532	0.981	1
RIMBP3	VCL	0.981	1
RIMBP3	ZNF532	0.981	1
RIN1	STAG2	0.981	1
RNF113B	STAG2	0.981	1
RNF144A	STAG2	0.981	1
SCYL1	Del_1p36.31	0.981	1
SETD2	WASL	0.981	1
SETD2	3p-Del	0.981	1
SLC14A1	STAG2	0.981	1
STAG2	TMEM47	0.981	1
STAG2	ZNHIT1	0.981	1
STXBP3	VCL	0.981	1
STXBP3	ZNF532	0.981	1
VCL	ZNF438	0.981	1
VCL	ZNF521	0.981	1
ZNF438	ZNF532	0.981	1
14q-Del	Del_11q23.1	0.981	1
18p-Del	Del_3p14.1	0.981	1
ADAM28	ARHGAP35	0.982	1
ADAM28	CSF1R	0.982	1
ADAM28	EGFR	0.982	1
ADAM28	KIAA0922	0.982	1
ADAM28	PRKAG2	0.982	1
ADAM28	PTCH1	0.982	1
ALMS1	CYP2C18	0.982	1
ALMS1	F2RL1	0.982	1
ALMS1	IFNB1	0.982	1
ALMS1	KCNK1	0.982	1
ALMS1	NDUFA3	0.982	1
ALMS1	NFE2L2	0.982	1
ALMS1	NKX2-1	0.982	1
ALMS1	ONECUT2	0.982	1
ALMS1	RALB	0.982	1
ALMS1	RCN1	0.982	1
ALMS1	RIN1	0.982	1
ALMS1	RNF113B	0.982	1
ALMS1	RNF144A	0.982	1
ALMS1	SLC14A1	0.982	1
ALMS1	TMEM47	0.982	1
ALMS1	ZNHIT1	0.982	1
AR	3q-Amp	0.982	1
ARHGAP35	C16orf78	0.982	1
ARHGAP35	C9orf171	0.982	1
ARHGAP35	CARKD	0.982	1
ARHGAP35	CDCA8	0.982	1
ARHGAP35	DPYSL4	0.982	1
ARHGAP35	IMPA2	0.982	1
ARHGAP35	INPP5E	0.982	1
ARHGAP35	NEK8	0.982	1
ARHGAP35	OR10G3	0.982	1
ARHGAP35	PDLIM4	0.982	1
ARHGAP35	PRDX5	0.982	1
ARHGAP35	PRODH	0.982	1
ARHGAP35	SCYL1	0.982	1
ARHGAP35	SLC1A7	0.982	1
ARHGAP35	SPATA13	0.982	1
BCLAF1	3p-Amp	0.982	1
C16orf78	CSF1R	0.982	1
C16orf78	EGFR	0.982	1
C16orf78	KIAA0922	0.982	1
C16orf78	PRKAG2	0.982	1
C16orf78	PTCH1	0.982	1
C16orf78	Del_14q31.1	0.982	1
C9orf171	CSF1R	0.982	1
C9orf171	EGFR	0.982	1
C9orf171	KIAA0922	0.982	1
C9orf171	PRKAG2	0.982	1
C9orf171	PTCH1	0.982	1
CARKD	CSF1R	0.982	1
CARKD	EGFR	0.982	1
CARKD	KIAA0922	0.982	1
CARKD	PRKAG2	0.982	1
CARKD	PTCH1	0.982	1
CDCA8	CSF1R	0.982	1
CDCA8	EGFR	0.982	1
CDCA8	KIAA0922	0.982	1
CDCA8	PRKAG2	0.982	1
CDCA8	PTCH1	0.982	1
CSF1R	DPYSL4	0.982	1
CSF1R	IMPA2	0.982	1
CSF1R	INPP5E	0.982	1
CSF1R	NEK8	0.982	1
CSF1R	OR10G3	0.982	1
CSF1R	PDLIM4	0.982	1
CSF1R	PRDX5	0.982	1
CSF1R	PRODH	0.982	1
CSF1R	SPATA13	0.982	1
CYP2C18	ZNF814	0.982	1
DPYSL4	EGFR	0.982	1
DPYSL4	KIAA0922	0.982	1
DPYSL4	PRKAG2	0.982	1
DPYSL4	PTCH1	0.982	1
DPYSL4	Del_14q31.1	0.982	1
ECHDC2	5p-Amp	0.982	1
ECHDC2	5q-Amp	0.982	1
EGFR	IMPA2	0.982	1
EGFR	INPP5E	0.982	1
EGFR	NEK8	0.982	1
EGFR	OR10G3	0.982	1
EGFR	PDLIM4	0.982	1
EGFR	PRDX5	0.982	1
EGFR	PRODH	0.982	1
EGFR	SCYL1	0.982	1
EGFR	SLC1A7	0.982	1
EGFR	SPATA13	0.982	1
F2RL1	ZNF814	0.982	1
FGFR3	Del_11q23.1	0.982	1
HSPA2	5p-Amp	0.982	1
HSPA2	5q-Amp	0.982	1
IFNB1	ZNF814	0.982	1
IMPA2	KIAA0922	0.982	1
IMPA2	PRKAG2	0.982	1
IMPA2	PTCH1	0.982	1
IMPA2	Del_14q31.1	0.982	1
INPP5E	PRKAG2	0.982	1
INPP5E	PTCH1	0.982	1
INPP5E	Del_14q31.1	0.982	1
KCNK1	ZNF814	0.982	1
KIAA0922	NEK8	0.982	1
KIAA0922	OR10G3	0.982	1
KIAA0922	PRDX5	0.982	1
KIAA0922	PRODH	0.982	1
KIAA0922	SCYL1	0.982	1
KIAA0922	SLC1A7	0.982	1
KIAA0922	SPATA13	0.982	1
KIF16B	9q-Del	0.982	1
KRAS	12p-Amp	0.982	1
NDUFA3	ZNF814	0.982	1
NEK8	PRKAG2	0.982	1
NEK8	PTCH1	0.982	1
NF1	Del_3p26.3	0.982	1
NF2	1p-Del	0.982	1
NKX2-1	ZNF814	0.982	1
NTRK3	12p-Amp	0.982	1
ONECUT2	ZNF814	0.982	1
OR10G3	PRKAG2	0.982	1
OR10G3	PTCH1	0.982	1
OR10G3	Del_14q31.1	0.982	1
PDLIM4	PRKAG2	0.982	1
PDLIM4	PTCH1	0.982	1
PRDX5	PRKAG2	0.982	1
PRDX5	PTCH1	0.982	1
PRKAG2	PRODH	0.982	1
PRKAG2	SLC1A7	0.982	1
PRKAG2	SPATA13	0.982	1
PRODH	PTCH1	0.982	1
PTCH1	SCYL1	0.982	1
PTCH1	SLC1A7	0.982	1
PTCH1	SPATA13	0.982	1
RALB	ZNF814	0.982	1
RCN1	ZNF814	0.982	1
RIN1	ZNF814	0.982	1
RNF113B	ZNF814	0.982	1
RNF144A	ZNF814	0.982	1
SCYL1	Del_14q31.1	0.982	1
SLC14A1	ZNF814	0.982	1
SLC23A1	12p-Amp	0.982	1
TMEM47	ZNF814	0.982	1
ZNF814	ZNHIT1	0.982	1
ZNF814	21q-Del	0.982	1
20p-Amp	Del_11q23.1	0.982	1
1p-Del	Del_16q23.3	0.982	1
3p-Del	Del_4q34.3	0.982	1
ACSF2	AR	0.983	1
ACSF2	PIK3CA	0.983	1
ACSF2	STAG2	0.983	1
AR	RAI1	0.983	1
ARHGAP33	3q-Del	0.983	1
ARHGAP35	2q-Amp	0.983	1
ARHGAP35	Del_9p23	0.983	1
CDK12	3p-Del	0.983	1
CSF1R	8p-Del	0.983	1
CYP2C18	KDM6A	0.983	1
DNMT3A	PIK3CA	0.983	1
F2RL1	KDM6A	0.983	1
F2RL1	NF1	0.983	1
FAT1	9q-Del	0.983	1
IFNB1	KDM6A	0.983	1
IFNB1	NF1	0.983	1
KCNK1	KDM6A	0.983	1
KCNK1	NF1	0.983	1
KDM6A	NDUFA3	0.983	1
KDM6A	NKX2-1	0.983	1
KDM6A	ONECUT2	0.983	1
KDM6A	RALB	0.983	1
KDM6A	RCN1	0.983	1
KDM6A	RIN1	0.983	1
KDM6A	RNF113B	0.983	1
KDM6A	RNF144A	0.983	1
KDM6A	SLC14A1	0.983	1
KDM6A	TMEM47	0.983	1
KDM6A	ZNHIT1	0.983	1
KIAA0922	MET	0.983	1
KIF16B	SETD2	0.983	1
KRAS	12q-Amp	0.983	1
MET	PRKAG2	0.983	1
MTOR	NASP	0.983	1
NASP	3q-Del	0.983	1
NDUFA3	NF1	0.983	1
NF1	NKX2-1	0.983	1
NF1	ONECUT2	0.983	1
NF1	RCN1	0.983	1
NF1	RIN1	0.983	1
NF1	RNF113B	0.983	1
NF1	RNF144A	0.983	1
NF1	SLC14A1	0.983	1
NF1	TMEM47	0.983	1
NF1	ZNHIT1	0.983	1
NIPBL	RAI1	0.983	1
PAM	21q-Del	0.983	1
SLC23A1	12q-Amp	0.983	1
SMARCB1	14q-Del	0.983	1
VCL	9p-Del	0.983	1
WDR52	Del_1p31.1	0.983	1
5q-Amp	Del_3p14.1	0.983	1
14q-Del	3q-Del	0.983	1
18p-Del	3q-Del	0.983	1
AR	16p-Amp	0.984	1
ATM	FAM178A	0.984	1
ATM	WASL	0.984	1
BCLAF1	Del_16q23.3	0.984	1
CDK12	FAT1	0.984	1
CDK12	SMARCA4	0.984	1
EPS15L1	NF2	0.984	1
FAM178A	SMARCA4	0.984	1
GALNT7	Amp_5q35.1	0.984	1
KDM5C	KRAS	0.984	1
KDM5C	PODXL	0.984	1
MTOR	NF1	0.984	1
NF2	16q-Amp	0.984	1
PARD6B	18p-Del	0.984	1
PBRM1	Del_8p23.2	0.984	1
PODXL	6p-Del	0.984	1
RIMBP3	VHL	0.984	1
STAG2	Del_11q23.1	0.984	1
SYNE1	Del_13q13.2	0.984	1
6q-Del	Del_4q34.3	0.984	1
ACSF2	ALMS1	0.985	1
ADAM28	FGFR3	0.985	1
ADAM28	KRAS	0.985	1
ADAM28	NOM1	0.985	1
ADAM28	NTRK3	0.985	1
ADAM28	PODXL	0.985	1
ADAM28	SLC23A1	0.985	1
ALMS1	RAI1	0.985	1
AR	18q-Del	0.985	1
ARAP3	CDKN2A	0.985	1
ARAP3	CXorf23	0.985	1
ARAP3	DNAJA3	0.985	1
ARAP3	ECHDC2	0.985	1
ARAP3	HSPA2	0.985	1
ARAP3	KIF16B	0.985	1
ARAP3	KLK10	0.985	1
ARAP3	PAM	0.985	1
ARAP3	VCL	0.985	1
ARAP3	ZNF532	0.985	1
C16orf78	FGFR3	0.985	1
C16orf78	KRAS	0.985	1
C16orf78	NOM1	0.985	1
C16orf78	NTRK3	0.985	1
C16orf78	PODXL	0.985	1
C16orf78	SLC23A1	0.985	1
C16orf78	14q-Del	0.985	1
C9orf171	FGFR3	0.985	1
C9orf171	KRAS	0.985	1
C9orf171	NOM1	0.985	1
C9orf171	NTRK3	0.985	1
C9orf171	PODXL	0.985	1
C9orf171	SLC23A1	0.985	1
CARKD	FGFR3	0.985	1
CARKD	NOM1	0.985	1
CARKD	NTRK3	0.985	1
CARKD	PODXL	0.985	1
CARKD	SLC23A1	0.985	1
CDCA8	FGFR3	0.985	1
CDCA8	KRAS	0.985	1
CDCA8	NTRK3	0.985	1
CDCA8	PODXL	0.985	1
CDCA8	SLC23A1	0.985	1
CDKN2A	CSK	0.985	1
CDKN2A	ENO1	0.985	1
CDKN2A	FZR1	0.985	1
CDKN2A	TCEB1	0.985	1
CDKN2A	ZC3H3	0.985	1
CDKN2A	Amp_Xq11.2	0.985	1
CSK	CXorf23	0.985	1
CSK	DNAJA3	0.985	1
CSK	HSPA2	0.985	1
CSK	KIF16B	0.985	1
CSK	KLK10	0.985	1
CSK	PAM	0.985	1
CSK	VCL	0.985	1
CSK	ZNF532	0.985	1
CXorf23	FZR1	0.985	1
CXorf23	SLC6A14	0.985	1
CXorf23	TCEB1	0.985	1
CXorf23	ZC3H3	0.985	1
CXorf23	Amp_Xq11.2	0.985	1
CYP2C18	NEFH	0.985	1
CYP2C18	NFE2L2	0.985	1
CYP2C18	PCF11	0.985	1
DNAJA3	ENO1	0.985	1
DNAJA3	FZR1	0.985	1
DNAJA3	SLC6A14	0.985	1
DNAJA3	TCEB1	0.985	1
DNAJA3	ZC3H3	0.985	1
DNAJA3	Amp_Xq11.2	0.985	1
DPYSL4	FGFR3	0.985	1
DPYSL4	KRAS	0.985	1
DPYSL4	NOM1	0.985	1
DPYSL4	NTRK3	0.985	1
DPYSL4	PODXL	0.985	1
DPYSL4	SLC23A1	0.985	1
DPYSL4	14q-Del	0.985	1
DPYSL4	Del_1p31.1	0.985	1
ECHDC2	ENO1	0.985	1
ECHDC2	FZR1	0.985	1
ECHDC2	SLC6A14	0.985	1
ECHDC2	TCEB1	0.985	1
ECHDC2	ZC3H3	0.985	1
ECHDC2	Amp_Xq11.2	0.985	1
EDIL3	SYNE1	0.985	1
ENO1	HSPA2	0.985	1
ENO1	KIF16B	0.985	1
ENO1	KLK10	0.985	1
ENO1	PAM	0.985	1
ENO1	VCL	0.985	1
ENO1	ZNF532	0.985	1
F2RL1	NEFH	0.985	1
F2RL1	NFE2L2	0.985	1
F2RL1	PCF11	0.985	1
FAT1	9p-Del	0.985	1
FGFR3	IMPA2	0.985	1
FGFR3	INPP5E	0.985	1
FGFR3	NEK8	0.985	1
FGFR3	OR10G3	0.985	1
FGFR3	PDLIM4	0.985	1
FGFR3	PRDX5	0.985	1
FGFR3	PRODH	0.985	1
FGFR3	SCYL1	0.985	1
FGFR3	SLC1A7	0.985	1
FGFR3	SPATA13	0.985	1
FZR1	HSPA2	0.985	1
FZR1	KIF16B	0.985	1
FZR1	KLK10	0.985	1
FZR1	PAM	0.985	1
FZR1	VCL	0.985	1
FZR1	ZNF532	0.985	1
HSPA2	SLC6A14	0.985	1
HSPA2	TCEB1	0.985	1
HSPA2	ZC3H3	0.985	1
HSPA2	Amp_Xq11.2	0.985	1
IFNB1	NEFH	0.985	1
IFNB1	NFE2L2	0.985	1
IFNB1	PCF11	0.985	1
IMPA2	KRAS	0.985	1
IMPA2	NOM1	0.985	1
IMPA2	NTRK3	0.985	1
IMPA2	PODXL	0.985	1
IMPA2	SLC23A1	0.985	1
IMPA2	14q-Del	0.985	1
IMPA2	Del_1p31.1	0.985	1
INPP5E	KRAS	0.985	1
INPP5E	NOM1	0.985	1
INPP5E	NTRK3	0.985	1
INPP5E	PODXL	0.985	1
INPP5E	SLC23A1	0.985	1
INPP5E	14q-Del	0.985	1
KCNK1	NEFH	0.985	1
KCNK1	NFE2L2	0.985	1
KCNK1	PCF11	0.985	1
KIF16B	SLC6A14	0.985	1
KIF16B	TCEB1	0.985	1
KIF16B	ZC3H3	0.985	1
KIF16B	Amp_Xq11.2	0.985	1
KLK10	SLC6A14	0.985	1
KLK10	TCEB1	0.985	1
KLK10	ZC3H3	0.985	1
KLK10	Amp_Xq11.2	0.985	1
KRAS	NEK8	0.985	1
KRAS	OR10G3	0.985	1
KRAS	PDLIM4	0.985	1
KRAS	PRDX5	0.985	1
KRAS	PRODH	0.985	1
KRAS	SCYL1	0.985	1
KRAS	SLC1A7	0.985	1
KRAS	SPATA13	0.985	1
NDUFA3	NEFH	0.985	1
NDUFA3	NFE2L2	0.985	1
NDUFA3	PCF11	0.985	1
NEFH	NKX2-1	0.985	1
NEFH	ONECUT2	0.985	1
NEFH	RALB	0.985	1
NEFH	RCN1	0.985	1
NEFH	RIN1	0.985	1
NEFH	RNF113B	0.985	1
NEFH	RNF144A	0.985	1
NEFH	SLC14A1	0.985	1
NEFH	TMEM47	0.985	1
NEFH	ZNHIT1	0.985	1
NEK8	NOM1	0.985	1
NEK8	NTRK3	0.985	1
NEK8	PODXL	0.985	1
NF1	NFE2L2	0.985	1
NF2	20p-Amp	0.985	1
NF2	Del_1p36.31	0.985	1
NFE2L2	NKX2-1	0.985	1
NFE2L2	ONECUT2	0.985	1
NFE2L2	RALB	0.985	1
NFE2L2	RCN1	0.985	1
NFE2L2	RIN1	0.985	1
NFE2L2	RNF113B	0.985	1
NFE2L2	RNF144A	0.985	1
NFE2L2	SLC14A1	0.985	1
NFE2L2	TMEM47	0.985	1
NFE2L2	ZNHIT1	0.985	1
NKX2-1	PCF11	0.985	1
NOM1	OR10G3	0.985	1
NOM1	PDLIM4	0.985	1
NOM1	PRDX5	0.985	1
NOM1	PRODH	0.985	1
NOM1	SCYL1	0.985	1
NOM1	SLC1A7	0.985	1
NOM1	SPATA13	0.985	1
NTRK3	OR10G3	0.985	1
NTRK3	PDLIM4	0.985	1
NTRK3	PRDX5	0.985	1
NTRK3	PTEN	0.985	1
NTRK3	SCYL1	0.985	1
NTRK3	SPATA13	0.985	1
NTRK3	Amp_2q32.1	0.985	1
ONECUT2	PCF11	0.985	1
OR10G3	PODXL	0.985	1
OR10G3	SLC23A1	0.985	1
OR10G3	14q-Del	0.985	1
PAM	SLC6A14	0.985	1
PAM	TCEB1	0.985	1
PAM	ZC3H3	0.985	1
PAM	Amp_Xq11.2	0.985	1
PCF11	RALB	0.985	1
PCF11	RCN1	0.985	1
PCF11	RIN1	0.985	1
PCF11	RNF113B	0.985	1
PCF11	RNF144A	0.985	1
PCF11	SLC14A1	0.985	1
PCF11	TMEM47	0.985	1
PCF11	ZNHIT1	0.985	1
PDLIM4	PODXL	0.985	1
PDLIM4	SLC23A1	0.985	1
PODXL	PRDX5	0.985	1
PODXL	PRODH	0.985	1
PODXL	PTEN	0.985	1
PODXL	SCYL1	0.985	1
PODXL	SLC1A7	0.985	1
PODXL	SPATA13	0.985	1
PODXL	Del_10q23.31	0.985	1
PRDX5	SLC23A1	0.985	1
PRODH	SLC23A1	0.985	1
SCYL1	SLC23A1	0.985	1
SCYL1	14q-Del	0.985	1
SLC1A7	SLC23A1	0.985	1
SLC23A1	SPATA13	0.985	1
SLC6A14	VCL	0.985	1
SLC6A14	ZNF532	0.985	1
TCEB1	VCL	0.985	1
TCEB1	ZNF532	0.985	1
VCL	ZC3H3	0.985	1
VCL	Amp_Xq11.2	0.985	1
WASL	3q-Amp	0.985	1
ZC3H3	ZNF532	0.985	1
ZNF532	Amp_Xq11.2	0.985	1
20p-Amp	5q-Amp	0.985	1
18p-Del	Del_16q23.3	0.985	1
18q-Del	21q-Del	0.985	1
1p-Del	Del_9p21.3	0.985	1
3q-Del	Amp_5q35.1	0.985	1
ACSF2	CYP2C18	0.986	1
ACSF2	F2RL1	0.986	1
ACSF2	KCNK1	0.986	1
ACSF2	NDUFA3	0.986	1
ACSF2	NKX2-1	0.986	1
ACSF2	ONECUT2	0.986	1
ACSF2	RALB	0.986	1
ACSF2	RCN1	0.986	1
ACSF2	RIN1	0.986	1
ACSF2	RNF113B	0.986	1
ACSF2	RNF144A	0.986	1
ACSF2	SLC14A1	0.986	1
ACSF2	TMEM47	0.986	1
ACSF2	ZNHIT1	0.986	1
AR	EPS15L1	0.986	1
ATM	VHL	0.986	1
CDK12	Del_2q22.1	0.986	1
CUL3	Amp_2q32.1	0.986	1
CYP2C18	DNMT3A	0.986	1
CYP2C18	RAI1	0.986	1
DNMT3A	IFNB1	0.986	1
DNMT3A	KCNK1	0.986	1
DNMT3A	NDUFA3	0.986	1
DNMT3A	NKX2-1	0.986	1
DNMT3A	ONECUT2	0.986	1
DNMT3A	RALB	0.986	1
DNMT3A	RCN1	0.986	1
DNMT3A	RIN1	0.986	1
DNMT3A	RNF113B	0.986	1
DNMT3A	RNF144A	0.986	1
DNMT3A	SLC14A1	0.986	1
DNMT3A	TMEM47	0.986	1
DNMT3A	ZNHIT1	0.986	1
DNMT3A	17p-Amp	0.986	1
ECHDC2	Del_3p14.1	0.986	1
EPS15L1	STAG2	0.986	1
F2RL1	RAI1	0.986	1
FAT1	16q-Amp	0.986	1
FGFR3	Del_9p21.3	0.986	1
IFNB1	RAI1	0.986	1
INPP5E	Amp_5q35.1	0.986	1
KCNK1	RAI1	0.986	1
KDM6A	SYNE1	0.986	1
KIF16B	Del_3p14.1	0.986	1
KLK10	Del_3p14.1	0.986	1
MTOR	9q-Del	0.986	1
NDUFA3	RAI1	0.986	1
NEK8	Amp_5q35.1	0.986	1
NF2	20q-Amp	0.986	1
NF2	Del_9p21.3	0.986	1
NKX2-1	RAI1	0.986	1
NUDT11	Amp_5q35.1	0.986	1
ONECUT2	RAI1	0.986	1
PDLIM4	Amp_5q35.1	0.986	1
PODXL	Del_9p21.3	0.986	1
PTCH1	5q-Amp	0.986	1
RAI1	RALB	0.986	1
RAI1	RCN1	0.986	1
RAI1	RIN1	0.986	1
RAI1	RNF113B	0.986	1
RAI1	RNF144A	0.986	1
RAI1	SLC14A1	0.986	1
RAI1	TMEM47	0.986	1
RAI1	ZNHIT1	0.986	1
SYNE1	Amp_3q26.32	0.986	1
ZNF438	Amp_5q35.1	0.986	1
20q-Amp	5q-Amp	0.986	1
5p-Amp	Del_3p14.1	0.986	1
5p-Amp	Del_3p12.2	0.986	1
8p-Del	9q-Del	0.986	1
Del_9p21.3	Del_16q23.3	0.986	1
ADAM28	ARHGAP33	0.987	1
ADAM28	BRAF	0.987	1
ADAM28	EDIL3	0.987	1
ADAM28	GPR50	0.987	1
ADAM28	MYF6	0.987	1
ADAM28	NASP	0.987	1
ADAM28	NUDT11	0.987	1
ADAM28	RILPL1	0.987	1
ADAM28	RIMBP3	0.987	1
ADAM28	STXBP3	0.987	1
ADAM28	ZNF438	0.987	1
ADAM28	ZNF521	0.987	1
ARAP3	TP53	0.987	1
ARHGAP33	C16orf78	0.987	1
ARHGAP33	C9orf171	0.987	1
ARHGAP33	CARKD	0.987	1
ARHGAP33	CDCA8	0.987	1
ARHGAP33	DPYSL4	0.987	1
ARHGAP33	IMPA2	0.987	1
ARHGAP33	INPP5E	0.987	1
ARHGAP33	NEK8	0.987	1
ARHGAP33	OR10G3	0.987	1
ARHGAP33	PDLIM4	0.987	1
ARHGAP33	PRDX5	0.987	1
ARHGAP33	SCYL1	0.987	1
ARHGAP33	SPATA13	0.987	1
ARHGAP33	6q-Del	0.987	1
ARHGAP35	SETD2	0.987	1
ARID1A	GLS	0.987	1
BCLAF1	CYP2C18	0.987	1
BCLAF1	F2RL1	0.987	1
BCLAF1	IFNB1	0.987	1
BCLAF1	KCNK1	0.987	1
BCLAF1	NDUFA3	0.987	1
BCLAF1	NKX2-1	0.987	1
BCLAF1	ONECUT2	0.987	1
BCLAF1	RALB	0.987	1
BCLAF1	RCN1	0.987	1
BCLAF1	RIN1	0.987	1
BCLAF1	RNF113B	0.987	1
BCLAF1	RNF144A	0.987	1
BCLAF1	SLC14A1	0.987	1
BCLAF1	TMEM47	0.987	1
BCLAF1	ZNHIT1	0.987	1
BRAF	C16orf78	0.987	1
BRAF	C9orf171	0.987	1
BRAF	CARKD	0.987	1
BRAF	CDCA8	0.987	1
BRAF	DPYSL4	0.987	1
BRAF	IMPA2	0.987	1
BRAF	INPP5E	0.987	1
BRAF	NEK8	0.987	1
BRAF	OR10G3	0.987	1
BRAF	PDLIM4	0.987	1
BRAF	PRDX5	0.987	1
BRAF	PRODH	0.987	1
BRAF	SCYL1	0.987	1
BRAF	SLC1A7	0.987	1
BRAF	SPATA13	0.987	1
C16orf78	EDIL3	0.987	1
C16orf78	GPR50	0.987	1
C16orf78	MYF6	0.987	1
C16orf78	NASP	0.987	1
C16orf78	NUDT11	0.987	1
C16orf78	RILPL1	0.987	1
C16orf78	RIMBP3	0.987	1
C16orf78	STXBP3	0.987	1
C16orf78	ZNF438	0.987	1
C16orf78	ZNF521	0.987	1
C9orf171	EDIL3	0.987	1
C9orf171	GPR50	0.987	1
C9orf171	MYF6	0.987	1
C9orf171	NASP	0.987	1
C9orf171	NUDT11	0.987	1
C9orf171	RILPL1	0.987	1
C9orf171	RIMBP3	0.987	1
C9orf171	STXBP3	0.987	1
C9orf171	ZNF438	0.987	1
C9orf171	ZNF521	0.987	1
CACNA1C	KDM5C	0.987	1
CARKD	EDIL3	0.987	1
CARKD	GPR50	0.987	1
CARKD	NASP	0.987	1
CARKD	NUDT11	0.987	1
CARKD	RILPL1	0.987	1
CARKD	RIMBP3	0.987	1
CARKD	STXBP3	0.987	1
CARKD	ZNF438	0.987	1
CARKD	ZNF521	0.987	1
CDCA8	EDIL3	0.987	1
CDCA8	GPR50	0.987	1
CDCA8	MYF6	0.987	1
CDCA8	NASP	0.987	1
CDCA8	NUDT11	0.987	1
CDCA8	RILPL1	0.987	1
CDCA8	RIMBP3	0.987	1
CDCA8	STXBP3	0.987	1
CDCA8	ZNF438	0.987	1
CDCA8	ZNF521	0.987	1
CUL3	PARD6B	0.987	1
CYP2C18	EPS15L1	0.987	1
DPYSL4	EDIL3	0.987	1
DPYSL4	GPR50	0.987	1
DPYSL4	MYF6	0.987	1
DPYSL4	NASP	0.987	1
DPYSL4	NUDT11	0.987	1
DPYSL4	RILPL1	0.987	1
DPYSL4	RIMBP3	0.987	1
DPYSL4	STXBP3	0.987	1
DPYSL4	ZNF438	0.987	1
DPYSL4	ZNF521	0.987	1
DPYSL4	6q-Del	0.987	1
EDIL3	IMPA2	0.987	1
EDIL3	INPP5E	0.987	1
EDIL3	NEK8	0.987	1
EDIL3	OR10G3	0.987	1
EDIL3	PDLIM4	0.987	1
EDIL3	PRDX5	0.987	1
EDIL3	PRODH	0.987	1
EDIL3	SCYL1	0.987	1
EDIL3	SLC1A7	0.987	1
EDIL3	SPATA13	0.987	1
ENO1	TP53	0.987	1
EPS15L1	F2RL1	0.987	1
EPS15L1	IFNB1	0.987	1
EPS15L1	KCNK1	0.987	1
EPS15L1	NDUFA3	0.987	1
EPS15L1	NKX2-1	0.987	1
EPS15L1	ONECUT2	0.987	1
EPS15L1	RALB	0.987	1
EPS15L1	RCN1	0.987	1
EPS15L1	RIN1	0.987	1
EPS15L1	RNF113B	0.987	1
EPS15L1	RNF144A	0.987	1
EPS15L1	SLC14A1	0.987	1
EPS15L1	TMEM47	0.987	1
EPS15L1	ZNHIT1	0.987	1
EPS15L1	1p-Del	0.987	1
FAM178A	18q-Del	0.987	1
GALNT7	Del_16q23.3	0.987	1
GPR50	IMPA2	0.987	1
GPR50	INPP5E	0.987	1
GPR50	NEK8	0.987	1
GPR50	OR10G3	0.987	1
GPR50	PDLIM4	0.987	1
GPR50	PRDX5	0.987	1
GPR50	PRODH	0.987	1
GPR50	SCYL1	0.987	1
GPR50	SLC1A7	0.987	1
GPR50	SPATA13	0.987	1
HSPA2	18q-Del	0.987	1
IMPA2	MYF6	0.987	1
IMPA2	NASP	0.987	1
IMPA2	NUDT11	0.987	1
IMPA2	RILPL1	0.987	1
IMPA2	RIMBP3	0.987	1
IMPA2	STXBP3	0.987	1
IMPA2	ZNF438	0.987	1
IMPA2	ZNF521	0.987	1
INPP5E	MYF6	0.987	1
INPP5E	NASP	0.987	1
INPP5E	NUDT11	0.987	1
INPP5E	RILPL1	0.987	1
INPP5E	RIMBP3	0.987	1
INPP5E	STXBP3	0.987	1
INPP5E	ZNF438	0.987	1
INPP5E	ZNF521	0.987	1
KIF16B	18q-Del	0.987	1
MTOR	PBRM1	0.987	1
MTOR	9p-Del	0.987	1
MYF6	NEK8	0.987	1
MYF6	OR10G3	0.987	1
MYF6	PDLIM4	0.987	1
MYF6	PRDX5	0.987	1
MYF6	PRODH	0.987	1
MYF6	SCYL1	0.987	1
MYF6	SLC1A7	0.987	1
MYF6	SPATA13	0.987	1
NASP	NEK8	0.987	1
NASP	OR10G3	0.987	1
NASP	PDLIM4	0.987	1
NASP	PRDX5	0.987	1
NASP	PRODH	0.987	1
NASP	SCYL1	0.987	1
NASP	SLC1A7	0.987	1
NASP	SPATA13	0.987	1
NEFH	NFE2L2	0.987	1
NEK8	NUDT11	0.987	1
NEK8	RILPL1	0.987	1
NEK8	RIMBP3	0.987	1
NEK8	STXBP3	0.987	1
NEK8	ZNF438	0.987	1
NEK8	ZNF521	0.987	1
NF1	21q-Del	0.987	1
NF1	3p-Del	0.987	1
NF2	SMARCB1	0.987	1
NOM1	Del_3p12.2	0.987	1
NTRK3	2q-Amp	0.987	1
NUDT11	OR10G3	0.987	1
NUDT11	PDLIM4	0.987	1
NUDT11	PRDX5	0.987	1
NUDT11	PRODH	0.987	1
NUDT11	SCYL1	0.987	1
NUDT11	SLC1A7	0.987	1
NUDT11	SPATA13	0.987	1
OR10G3	RILPL1	0.987	1
OR10G3	RIMBP3	0.987	1
OR10G3	STXBP3	0.987	1
OR10G3	ZNF438	0.987	1
OR10G3	ZNF521	0.987	1
PARD6B	Del_16q23.3	0.987	1
PBRM1	3q-Del	0.987	1
PDLIM4	RILPL1	0.987	1
PDLIM4	RIMBP3	0.987	1
PDLIM4	STXBP3	0.987	1
PDLIM4	ZNF438	0.987	1
PDLIM4	ZNF521	0.987	1
PRDX5	RILPL1	0.987	1
PRDX5	RIMBP3	0.987	1
PRDX5	STXBP3	0.987	1
PRDX5	ZNF438	0.987	1
PRDX5	ZNF521	0.987	1
PRKAG2	9q-Del	0.987	1
PRODH	RILPL1	0.987	1
PRODH	RIMBP3	0.987	1
PRODH	STXBP3	0.987	1
PRODH	ZNF438	0.987	1
PRODH	ZNF521	0.987	1
PRODH	6q-Del	0.987	1
PTCH1	SETD2	0.987	1
PTCH1	5p-Amp	0.987	1
RAI1	TP53	0.987	1
RILPL1	SCYL1	0.987	1
RILPL1	SLC1A7	0.987	1
RILPL1	SPATA13	0.987	1
RIMBP3	SCYL1	0.987	1
RIMBP3	SLC1A7	0.987	1
RIMBP3	SPATA13	0.987	1
SCYL1	STXBP3	0.987	1
SCYL1	ZNF438	0.987	1
SCYL1	ZNF521	0.987	1
SETD2	Del_1p31.1	0.987	1
SLC1A7	STXBP3	0.987	1
SLC1A7	ZNF438	0.987	1
SLC1A7	ZNF521	0.987	1
SLC1A7	6q-Del	0.987	1
SLC6A14	TP53	0.987	1
SMARCB1	3p-Amp	0.987	1
SPATA13	STXBP3	0.987	1
SPATA13	ZNF438	0.987	1
SPATA13	ZNF521	0.987	1
SYNE1	18p-Del	0.987	1
TP53	ZC3H3	0.987	1
TP53	8p-Del	0.987	1
WDR52	6q-Del	0.987	1
16q-Amp	21q-Del	0.987	1
20p-Amp	5p-Amp	0.987	1
ADCY8	CYP2C18	0.988	1
ADCY8	F2RL1	0.988	1
ADCY8	IFNB1	0.988	1
ADCY8	KCNK1	0.988	1
ADCY8	NDUFA3	0.988	1
ADCY8	NKX2-1	0.988	1
ADCY8	ONECUT2	0.988	1
ADCY8	RALB	0.988	1
ADCY8	RCN1	0.988	1
ADCY8	RIN1	0.988	1
ADCY8	RNF113B	0.988	1
ADCY8	RNF144A	0.988	1
ADCY8	SLC14A1	0.988	1
ADCY8	TMEM47	0.988	1
ADCY8	ZNHIT1	0.988	1
AR	GALNT7	0.988	1
BCLAF1	20p-Amp	0.988	1
CACNA1C	Del_10q23.31	0.988	1
CDKN2A	CXorf23	0.988	1
CDKN2A	DNAJA3	0.988	1
CDKN2A	ECHDC2	0.988	1
CDKN2A	HSPA2	0.988	1
CDKN2A	KIF16B	0.988	1
CDKN2A	KLK10	0.988	1
CDKN2A	PAM	0.988	1
CDKN2A	VCL	0.988	1
CDKN2A	ZNF532	0.988	1
CXorf23	DNAJA3	0.988	1
CXorf23	ECHDC2	0.988	1
CXorf23	HSPA2	0.988	1
CXorf23	KIF16B	0.988	1
CXorf23	KLK10	0.988	1
CXorf23	PAM	0.988	1
CXorf23	VCL	0.988	1
CXorf23	ZNF532	0.988	1
CYP2C18	GALNT7	0.988	1
CYP2C18	PARD6B	0.988	1
CYP2C18	PCK1	0.988	1
CYP2C18	SMARCB1	0.988	1
CYP2C18	WDR52	0.988	1
CYP2C18	ZFYVE26	0.988	1
DNAJA3	ECHDC2	0.988	1
DNAJA3	HSPA2	0.988	1
DNAJA3	KIF16B	0.988	1
DNAJA3	KLK10	0.988	1
DNAJA3	PAM	0.988	1
DNAJA3	VCL	0.988	1
DNAJA3	ZNF532	0.988	1
ECHDC2	HSPA2	0.988	1
ECHDC2	KIF16B	0.988	1
ECHDC2	KLK10	0.988	1
ECHDC2	PAM	0.988	1
ECHDC2	VCL	0.988	1
ECHDC2	ZNF532	0.988	1
ENO1	16p-Amp	0.988	1
F2RL1	GALNT7	0.988	1
F2RL1	PARD6B	0.988	1
F2RL1	PCK1	0.988	1
F2RL1	SMARCB1	0.988	1
F2RL1	WDR52	0.988	1
F2RL1	ZFYVE26	0.988	1
GALNT7	IFNB1	0.988	1
GALNT7	KCNK1	0.988	1
GALNT7	NDUFA3	0.988	1
GALNT7	NKX2-1	0.988	1
GALNT7	ONECUT2	0.988	1
GALNT7	RALB	0.988	1
GALNT7	RCN1	0.988	1
GALNT7	RIN1	0.988	1
GALNT7	RNF113B	0.988	1
GALNT7	RNF144A	0.988	1
GALNT7	SLC14A1	0.988	1
GALNT7	TMEM47	0.988	1
GALNT7	ZNHIT1	0.988	1
GPR50	Del_11q23.1	0.988	1
HSPA2	KIF16B	0.988	1
HSPA2	KLK10	0.988	1
HSPA2	PAM	0.988	1
HSPA2	VCL	0.988	1
HSPA2	ZNF532	0.988	1
HSPA2	18p-Del	0.988	1
IFNB1	PARD6B	0.988	1
IFNB1	PCK1	0.988	1
IFNB1	SMARCB1	0.988	1
IFNB1	WDR52	0.988	1
IFNB1	ZFYVE26	0.988	1
KCNK1	PARD6B	0.988	1
KCNK1	PCK1	0.988	1
KCNK1	SMARCB1	0.988	1
KCNK1	WDR52	0.988	1
KCNK1	ZFYVE26	0.988	1
KIF16B	KLK10	0.988	1
KIF16B	PAM	0.988	1
KIF16B	VCL	0.988	1
KIF16B	ZNF532	0.988	1
KIF16B	18p-Del	0.988	1
KLK10	PAM	0.988	1
KLK10	VCL	0.988	1
KLK10	ZNF532	0.988	1
NDUFA3	PARD6B	0.988	1
NDUFA3	PCK1	0.988	1
NDUFA3	SMARCB1	0.988	1
NDUFA3	WDR52	0.988	1
NDUFA3	ZFYVE26	0.988	1
NIPBL	SMARCB1	0.988	1
NKX2-1	PARD6B	0.988	1
NKX2-1	PCK1	0.988	1
NKX2-1	SMARCB1	0.988	1
NKX2-1	WDR52	0.988	1
NKX2-1	ZFYVE26	0.988	1
NOM1	Del_2q37.3	0.988	1
ONECUT2	PARD6B	0.988	1
ONECUT2	PCK1	0.988	1
ONECUT2	SMARCB1	0.988	1
ONECUT2	WDR52	0.988	1
ONECUT2	ZFYVE26	0.988	1
PAM	VCL	0.988	1
PAM	ZNF532	0.988	1
PARD6B	PIK3CA	0.988	1
PARD6B	RALB	0.988	1
PARD6B	RCN1	0.988	1
PARD6B	RIN1	0.988	1
PARD6B	RNF113B	0.988	1
PARD6B	RNF144A	0.988	1
PARD6B	SLC14A1	0.988	1
PARD6B	TMEM47	0.988	1
PARD6B	ZNHIT1	0.988	1
PBRM1	SLC23A1	0.988	1
PBRM1	Amp_5q35.1	0.988	1
PCK1	RALB	0.988	1
PCK1	RCN1	0.988	1
PCK1	RIN1	0.988	1
PCK1	RNF113B	0.988	1
PCK1	RNF144A	0.988	1
PCK1	SLC14A1	0.988	1
PCK1	TMEM47	0.988	1
PCK1	ZNHIT1	0.988	1
PIK3CA	Del_8p23.2	0.988	1
RALB	SMARCB1	0.988	1
RALB	WDR52	0.988	1
RALB	ZFYVE26	0.988	1
RCN1	SMARCB1	0.988	1
RCN1	WDR52	0.988	1
RCN1	ZFYVE26	0.988	1
RILPL1	Del_11q23.1	0.988	1
RIMBP3	Del_11q23.1	0.988	1
RIN1	SMARCB1	0.988	1
RIN1	WDR52	0.988	1
RIN1	ZFYVE26	0.988	1
RNF113B	SMARCB1	0.988	1
RNF113B	WDR52	0.988	1
RNF113B	ZFYVE26	0.988	1
RNF144A	SMARCB1	0.988	1
RNF144A	WDR52	0.988	1
RNF144A	ZFYVE26	0.988	1
SLC14A1	SMARCB1	0.988	1
SLC14A1	WDR52	0.988	1
SLC14A1	ZFYVE26	0.988	1
SMARCB1	TMEM47	0.988	1
SMARCB1	ZNHIT1	0.988	1
SYNE1	17p-Del	0.988	1
TMEM47	WDR52	0.988	1
TMEM47	ZFYVE26	0.988	1
VCL	ZNF532	0.988	1
VHL	14q-Del	0.988	1
WDR52	ZNHIT1	0.988	1
ZC3H3	Del_4q34.3	0.988	1
ZFYVE26	ZNHIT1	0.988	1
20q-Amp	5p-Amp	0.988	1
18q-Del	Del_8p23.2	0.988	1
8p-Del	9p-Del	0.988	1
Del_9p23	Del_10q23.31	0.988	1
Del_9p21.3	Del_10q23.31	0.988	1
ACSF2	NEFH	0.989	1
AR	16q-Amp	0.989	1
BCLAF1	20q-Amp	0.989	1
C16orf78	12p-Amp	0.989	1
CARKD	12p-Amp	0.989	1
CUL3	MET	0.989	1
DPYSL4	12p-Amp	0.989	1
ECHDC2	3p-Del	0.989	1
EGFR	Del_3p14.1	0.989	1
EPS15L1	NF1	0.989	1
FAM178A	18p-Del	0.989	1
FAT1	Del_4q34.3	0.989	1
FGFR3	Amp_17q24.3	0.989	1
KDM5C	MYF6	0.989	1
KDM5C	NUDT11	0.989	1
KIF16B	3p-Del	0.989	1
NEK8	12p-Amp	0.989	1
NFE2L2	9q-Del	0.989	1
PCF11	RAI1	0.989	1
PCK1	Amp_17q24.3	0.989	1
PRODH	12p-Amp	0.989	1
PTEN	21q-Del	0.989	1
SETD2	Del_3p14.1	0.989	1
SLC1A7	12p-Amp	0.989	1
VCL	3p-Del	0.989	1
ZNF814	16p-Amp	0.989	1
5p-Amp	Del_14q31.1	0.989	1
21q-Del	8p-Del	0.989	1
21q-Del	Del_9p23	0.989	1
8p-Del	Amp_5q35.1	0.989	1
ADAM28	ARAP3	0.99	1
ADAM28	CSK	0.99	1
ADAM28	ENO1	0.99	1
ADAM28	FZR1	0.99	1
ADAM28	SLC6A14	0.99	1
ADAM28	TCEB1	0.99	1
ADAM28	ZC3H3	0.99	1
ADAM28	Amp_Xq11.2	0.99	1
ADCY8	ZNF814	0.99	1
ALMS1	PARD6B	0.99	1
ARAP3	C16orf78	0.99	1
ARAP3	C9orf171	0.99	1
ARAP3	CARKD	0.99	1
ARAP3	CDCA8	0.99	1
ARAP3	DPYSL4	0.99	1
ARAP3	IMPA2	0.99	1
ARAP3	INPP5E	0.99	1
ARAP3	NEK8	0.99	1
ARAP3	OR10G3	0.99	1
ARAP3	PDLIM4	0.99	1
ARAP3	PRDX5	0.99	1
ARAP3	PRODH	0.99	1
ARAP3	SCYL1	0.99	1
ARAP3	SLC1A7	0.99	1
ARAP3	SPATA13	0.99	1
ARAP3	Del_3p21.2	0.99	1
ARHGAP33	PTEN	0.99	1
ARID1A	CSF1R	0.99	1
ARID1A	EGFR	0.99	1
BCLAF1	TP53	0.99	1
C16orf78	CSK	0.99	1
C16orf78	ENO1	0.99	1
C16orf78	FZR1	0.99	1
C16orf78	SLC6A14	0.99	1
C16orf78	TCEB1	0.99	1
C16orf78	ZC3H3	0.99	1
C16orf78	12q-Amp	0.99	1
C16orf78	20p-Amp	0.99	1
C16orf78	Amp_Xq11.2	0.99	1
C16orf78	Del_8p23.2	0.99	1
C9orf171	CSK	0.99	1
C9orf171	ENO1	0.99	1
C9orf171	FZR1	0.99	1
C9orf171	SLC6A14	0.99	1
C9orf171	TCEB1	0.99	1
C9orf171	20p-Amp	0.99	1
C9orf171	Amp_Xq11.2	0.99	1
CARKD	CSK	0.99	1
CARKD	ENO1	0.99	1
CARKD	FZR1	0.99	1
CARKD	SLC6A14	0.99	1
CARKD	TCEB1	0.99	1
CARKD	ZC3H3	0.99	1
CARKD	12q-Amp	0.99	1
CARKD	20p-Amp	0.99	1
CARKD	Amp_Xq11.2	0.99	1
CDCA8	CSK	0.99	1
CDCA8	ENO1	0.99	1
CDCA8	FZR1	0.99	1
CDCA8	SLC6A14	0.99	1
CDCA8	TCEB1	0.99	1
CDCA8	ZC3H3	0.99	1
CDCA8	Amp_Xq11.2	0.99	1
CDK12	CYP2C18	0.99	1
CDK12	F2RL1	0.99	1
CDK12	IFNB1	0.99	1
CDK12	KCNK1	0.99	1
CDK12	NDUFA3	0.99	1
CDK12	NF2	0.99	1
CDK12	NKX2-1	0.99	1
CDK12	ONECUT2	0.99	1
CDK12	RALB	0.99	1
CDK12	RCN1	0.99	1
CDK12	RIN1	0.99	1
CDK12	RNF113B	0.99	1
CDK12	RNF144A	0.99	1
CDK12	SLC14A1	0.99	1
CDK12	TMEM47	0.99	1
CDK12	ZNHIT1	0.99	1
CSK	DPYSL4	0.99	1
CSK	IMPA2	0.99	1
CSK	INPP5E	0.99	1
CSK	NEK8	0.99	1
CSK	OR10G3	0.99	1
CSK	PDLIM4	0.99	1
CSK	PRDX5	0.99	1
CSK	PRODH	0.99	1
CSK	SCYL1	0.99	1
CSK	SLC1A7	0.99	1
CSK	SPATA13	0.99	1
CYP2C18	FAM178A	0.99	1
CYP2C18	GLS	0.99	1
CYP2C18	TXNIP	0.99	1
CYP2C18	WASL	0.99	1
DNMT3A	MTOR	0.99	1
DPYSL4	FZR1	0.99	1
DPYSL4	SLC6A14	0.99	1
DPYSL4	TCEB1	0.99	1
DPYSL4	ZC3H3	0.99	1
DPYSL4	12q-Amp	0.99	1
DPYSL4	20p-Amp	0.99	1
DPYSL4	1p-Del	0.99	1
DPYSL4	6p-Del	0.99	1
DPYSL4	Amp_Xq11.2	0.99	1
DPYSL4	Del_10q23.31	0.99	1
ENO1	IMPA2	0.99	1
ENO1	INPP5E	0.99	1
ENO1	NEK8	0.99	1
ENO1	OR10G3	0.99	1
ENO1	PDLIM4	0.99	1
ENO1	PRDX5	0.99	1
ENO1	PRODH	0.99	1
ENO1	SCYL1	0.99	1
ENO1	SLC1A7	0.99	1
ENO1	16q-Amp	0.99	1
F2RL1	FAM178A	0.99	1
F2RL1	GLS	0.99	1
F2RL1	TXNIP	0.99	1
F2RL1	WASL	0.99	1
FAM178A	IFNB1	0.99	1
FAM178A	KCNK1	0.99	1
FAM178A	NDUFA3	0.99	1
FAM178A	NF2	0.99	1
FAM178A	ONECUT2	0.99	1
FAM178A	RALB	0.99	1
FAM178A	RCN1	0.99	1
FAM178A	RIN1	0.99	1
FAM178A	RNF113B	0.99	1
FAM178A	RNF144A	0.99	1
FAM178A	SLC14A1	0.99	1
FAM178A	TMEM47	0.99	1
FAM178A	ZNHIT1	0.99	1
FAT1	20p-Amp	0.99	1
FGFR3	Amp_3q26.32	0.99	1
FZR1	IMPA2	0.99	1
FZR1	INPP5E	0.99	1
FZR1	NEK8	0.99	1
FZR1	OR10G3	0.99	1
FZR1	PDLIM4	0.99	1
FZR1	PRDX5	0.99	1
FZR1	PRODH	0.99	1
FZR1	SCYL1	0.99	1
FZR1	SLC1A7	0.99	1
FZR1	SPATA13	0.99	1
FZR1	Del_3p21.2	0.99	1
GALNT7	ZNF814	0.99	1
GLS	IFNB1	0.99	1
GLS	KCNK1	0.99	1
GLS	NDUFA3	0.99	1
GLS	NKX2-1	0.99	1
GLS	ONECUT2	0.99	1
GLS	RALB	0.99	1
GLS	RCN1	0.99	1
GLS	RIN1	0.99	1
GLS	RNF113B	0.99	1
GLS	RNF144A	0.99	1
GLS	SLC14A1	0.99	1
GLS	TMEM47	0.99	1
GLS	ZNHIT1	0.99	1
GLS	Amp_5q35.1	0.99	1
GPR50	12p-Amp	0.99	1
GPR50	Amp_2q32.1	0.99	1
IFNB1	TXNIP	0.99	1
IFNB1	WASL	0.99	1
IMPA2	SLC6A14	0.99	1
IMPA2	TCEB1	0.99	1
IMPA2	ZC3H3	0.99	1
IMPA2	20p-Amp	0.99	1
IMPA2	Amp_Xq11.2	0.99	1
IMPA2	Del_8p23.2	0.99	1
INPP5E	SLC6A14	0.99	1
INPP5E	TCEB1	0.99	1
INPP5E	ZC3H3	0.99	1
INPP5E	20p-Amp	0.99	1
INPP5E	Amp_Xq11.2	0.99	1
INPP5E	Del_8p23.2	0.99	1
KCNK1	TXNIP	0.99	1
KCNK1	WASL	0.99	1
MTOR	SYNE1	0.99	1
NASP	PTEN	0.99	1
NDUFA3	TXNIP	0.99	1
NDUFA3	WASL	0.99	1
NEK8	SLC6A14	0.99	1
NEK8	TCEB1	0.99	1
NEK8	ZC3H3	0.99	1
NEK8	12q-Amp	0.99	1
NEK8	20p-Amp	0.99	1
NEK8	Amp_Xq11.2	0.99	1
NFE2L2	SETD2	0.99	1
NKX2-1	TXNIP	0.99	1
NKX2-1	WASL	0.99	1
NTRK3	Amp_3q26.32	0.99	1
ONECUT2	TXNIP	0.99	1
ONECUT2	WASL	0.99	1
OR10G3	SLC6A14	0.99	1
OR10G3	TCEB1	0.99	1
OR10G3	ZC3H3	0.99	1
OR10G3	Amp_Xq11.2	0.99	1
PAM	3p-Amp	0.99	1
PDLIM4	SLC6A14	0.99	1
PDLIM4	TCEB1	0.99	1
PDLIM4	ZC3H3	0.99	1
PDLIM4	20p-Amp	0.99	1
PDLIM4	Amp_Xq11.2	0.99	1
PDLIM4	Del_8p23.2	0.99	1
PRDX5	SLC6A14	0.99	1
PRDX5	TCEB1	0.99	1
PRDX5	ZC3H3	0.99	1
PRDX5	Amp_Xq11.2	0.99	1
PRODH	SLC6A14	0.99	1
PRODH	TCEB1	0.99	1
PRODH	ZC3H3	0.99	1
PRODH	20p-Amp	0.99	1
PRODH	6p-Del	0.99	1
PRODH	Amp_Xq11.2	0.99	1
PRODH	Del_10q23.31	0.99	1
RAI1	Amp_3q26.32	0.99	1
RALB	TXNIP	0.99	1
RALB	WASL	0.99	1
RCN1	TXNIP	0.99	1
RCN1	WASL	0.99	1
RIN1	TXNIP	0.99	1
RIN1	WASL	0.99	1
RNF113B	TXNIP	0.99	1
RNF113B	WASL	0.99	1
RNF144A	TXNIP	0.99	1
RNF144A	WASL	0.99	1
SCYL1	SLC6A14	0.99	1
SCYL1	TCEB1	0.99	1
SCYL1	ZC3H3	0.99	1
SCYL1	Amp_Xq11.2	0.99	1
SLC14A1	TXNIP	0.99	1
SLC14A1	WASL	0.99	1
SLC1A7	SLC6A14	0.99	1
SLC1A7	TCEB1	0.99	1
SLC1A7	ZC3H3	0.99	1
SLC1A7	20p-Amp	0.99	1
SLC1A7	6p-Del	0.99	1
SLC1A7	Amp_Xq11.2	0.99	1
SLC1A7	Del_10q23.31	0.99	1
SLC6A14	SPATA13	0.99	1
SMARCA4	20p-Amp	0.99	1
SPATA13	TCEB1	0.99	1
SPATA13	ZC3H3	0.99	1
SPATA13	Amp_Xq11.2	0.99	1
SPATA13	Del_10q23.31	0.99	1
STXBP3	Amp_2q32.1	0.99	1
TMEM47	TXNIP	0.99	1
TMEM47	WASL	0.99	1
TXNIP	ZNHIT1	0.99	1
WASL	ZNHIT1	0.99	1
WASL	Del_16q23.3	0.99	1
8p-Del	Del_9p23	0.99	1
Del_1q44	Del_16q23.3	0.99	1
Del_2q22.1	Del_9p21.3	0.99	1
ARHGAP33	6p-Del	0.991	1
ARHGAP35	CYP2C18	0.991	1
ARHGAP35	F2RL1	0.991	1
ARHGAP35	IFNB1	0.991	1
ARHGAP35	KCNK1	0.991	1
ARHGAP35	NDUFA3	0.991	1
ARHGAP35	NKX2-1	0.991	1
ARHGAP35	ONECUT2	0.991	1
ARHGAP35	RALB	0.991	1
ARHGAP35	RCN1	0.991	1
ARHGAP35	RIN1	0.991	1
ARHGAP35	RNF113B	0.991	1
ARHGAP35	RNF144A	0.991	1
ARHGAP35	SLC14A1	0.991	1
ARHGAP35	TMEM47	0.991	1
ARHGAP35	ZNHIT1	0.991	1
ATM	NTRK3	0.991	1
ATM	3q-Del	0.991	1
BCLAF1	PCF11	0.991	1
BCLAF1	Del_2q37.3	0.991	1
C16orf78	20q-Amp	0.991	1
C16orf78	Del_9p21.3	0.991	1
C9orf171	20q-Amp	0.991	1
CACNA1C	CDK12	0.991	1
CACNA1C	TXNIP	0.991	1
CARKD	20q-Amp	0.991	1
CARKD	Del_9p21.3	0.991	1
CSF1R	CYP2C18	0.991	1
CSF1R	IFNB1	0.991	1
CSF1R	KCNK1	0.991	1
CSF1R	NDUFA3	0.991	1
CSF1R	NKX2-1	0.991	1
CSF1R	ONECUT2	0.991	1
CSF1R	RALB	0.991	1
CSF1R	RCN1	0.991	1
CSF1R	RIN1	0.991	1
CSF1R	RNF113B	0.991	1
CSF1R	RNF144A	0.991	1
CSF1R	SLC14A1	0.991	1
CSF1R	TMEM47	0.991	1
CSF1R	ZNHIT1	0.991	1
CYP2C18	EGFR	0.991	1
CYP2C18	KIAA0922	0.991	1
CYP2C18	PRKAG2	0.991	1
CYP2C18	PTCH1	0.991	1
DPYSL4	20q-Amp	0.991	1
DPYSL4	Del_9p21.3	0.991	1
EDIL3	Amp_7q31.2	0.991	1
EGFR	F2RL1	0.991	1
EGFR	IFNB1	0.991	1
EGFR	KCNK1	0.991	1
EGFR	NDUFA3	0.991	1
EGFR	NKX2-1	0.991	1
EGFR	ONECUT2	0.991	1
EGFR	RALB	0.991	1
EGFR	RCN1	0.991	1
EGFR	RIN1	0.991	1
EGFR	RNF113B	0.991	1
EGFR	RNF144A	0.991	1
EGFR	SLC14A1	0.991	1
EGFR	TMEM47	0.991	1
EGFR	ZNHIT1	0.991	1
F2RL1	KIAA0922	0.991	1
F2RL1	PRKAG2	0.991	1
F2RL1	PTCH1	0.991	1
FAT1	20q-Amp	0.991	1
FAT1	Del_2q22.1	0.991	1
FGFR3	17p-Del	0.991	1
FZR1	SYNE1	0.991	1
GLS	NIPBL	0.991	1
GLS	3p-Amp	0.991	1
GPR50	12q-Amp	0.991	1
GPR50	2q-Amp	0.991	1
IFNB1	KIAA0922	0.991	1
IFNB1	PRKAG2	0.991	1
IFNB1	PTCH1	0.991	1
IMPA2	20q-Amp	0.991	1
INPP5E	20q-Amp	0.991	1
KCNK1	KIAA0922	0.991	1
KCNK1	PTCH1	0.991	1
KDM6A	PCK1	0.991	1
KIAA0922	NDUFA3	0.991	1
KIAA0922	NKX2-1	0.991	1
KIAA0922	ONECUT2	0.991	1
KIAA0922	RALB	0.991	1
KIAA0922	RCN1	0.991	1
KIAA0922	RIN1	0.991	1
KIAA0922	RNF113B	0.991	1
KIAA0922	RNF144A	0.991	1
KIAA0922	SLC14A1	0.991	1
KIAA0922	TMEM47	0.991	1
KIAA0922	ZNHIT1	0.991	1
KIAA0922	18q-Del	0.991	1
MET	NIPBL	0.991	1
NASP	Amp_7q31.2	0.991	1
NDUFA3	PRKAG2	0.991	1
NDUFA3	PTCH1	0.991	1
NEK8	20q-Amp	0.991	1
NF1	SMARCB1	0.991	1
NF2	Del_1p31.1	0.991	1
NIPBL	WASL	0.991	1
NKX2-1	PRKAG2	0.991	1
NKX2-1	PTCH1	0.991	1
ONECUT2	PRKAG2	0.991	1
ONECUT2	PTCH1	0.991	1
PDLIM4	20q-Amp	0.991	1
PRKAG2	RALB	0.991	1
PRKAG2	RCN1	0.991	1
PRKAG2	RIN1	0.991	1
PRKAG2	RNF113B	0.991	1
PRKAG2	RNF144A	0.991	1
PRKAG2	SLC14A1	0.991	1
PRKAG2	TMEM47	0.991	1
PRKAG2	ZNHIT1	0.991	1
PRODH	20q-Amp	0.991	1
PRODH	10q-Del	0.991	1
PTCH1	RALB	0.991	1
PTCH1	RCN1	0.991	1
PTCH1	RIN1	0.991	1
PTCH1	RNF113B	0.991	1
PTCH1	RNF144A	0.991	1
PTCH1	SLC14A1	0.991	1
PTCH1	TMEM47	0.991	1
PTCH1	ZNHIT1	0.991	1
SCYL1	Del_9p21.3	0.991	1
SLC1A7	20q-Amp	0.991	1
SLC1A7	10q-Del	0.991	1
SLC6A14	SYNE1	0.991	1
SMARCA4	20q-Amp	0.991	1
STAG2	TXNIP	0.991	1
STXBP3	2q-Amp	0.991	1
WASL	3p-Amp	0.991	1
ZC3H3	Del_1p36.31	0.991	1
ZNF814	Del_8p23.2	0.991	1
3q-Del	Del_14q31.1	0.991	1
8p-Del	Del_9p21.3	0.991	1
Amp_Xq11.2	Del_1p36.31	0.991	1
Del_1p31.1	Del_16q23.3	0.991	1
Del_9p23	Del_16q23.3	0.991	1
Del_11q23.1	Del_14q31.1	0.991	1
ADAM28	CDKN2A	0.992	1
ADAM28	CXorf23	0.992	1
ADAM28	DNAJA3	0.992	1
ADAM28	ECHDC2	0.992	1
ADAM28	HSPA2	0.992	1
ADAM28	KIF16B	0.992	1
ADAM28	KLK10	0.992	1
ADAM28	PAM	0.992	1
ADAM28	VCL	0.992	1
ADAM28	ZNF532	0.992	1
ALMS1	TXNIP	0.992	1
ARAP3	Del_3p26.3	0.992	1
ARHGAP33	Del_10q23.31	0.992	1
ARHGAP35	Del_14q31.1	0.992	1
C16orf78	CDKN2A	0.992	1
C16orf78	CXorf23	0.992	1
C16orf78	DNAJA3	0.992	1
C16orf78	ECHDC2	0.992	1
C16orf78	HSPA2	0.992	1
C16orf78	KIF16B	0.992	1
C16orf78	KLK10	0.992	1
C16orf78	PAM	0.992	1
C16orf78	VCL	0.992	1
C16orf78	ZNF532	0.992	1
C16orf78	Del_9p23	0.992	1
C9orf171	CDKN2A	0.992	1
C9orf171	CXorf23	0.992	1
C9orf171	DNAJA3	0.992	1
C9orf171	ECHDC2	0.992	1
C9orf171	HSPA2	0.992	1
C9orf171	KIF16B	0.992	1
C9orf171	KLK10	0.992	1
C9orf171	PAM	0.992	1
C9orf171	VCL	0.992	1
C9orf171	ZNF532	0.992	1
CARKD	CDKN2A	0.992	1
CARKD	CXorf23	0.992	1
CARKD	DNAJA3	0.992	1
CARKD	ECHDC2	0.992	1
CARKD	HSPA2	0.992	1
CARKD	KIF16B	0.992	1
CARKD	KLK10	0.992	1
CARKD	PAM	0.992	1
CARKD	VCL	0.992	1
CARKD	ZNF532	0.992	1
CARKD	Del_2q37.3	0.992	1
CARKD	Del_9p23	0.992	1
CDCA8	CDKN2A	0.992	1
CDCA8	CXorf23	0.992	1
CDCA8	DNAJA3	0.992	1
CDCA8	ECHDC2	0.992	1
CDCA8	HSPA2	0.992	1
CDCA8	KIF16B	0.992	1
CDCA8	KLK10	0.992	1
CDCA8	PAM	0.992	1
CDCA8	VCL	0.992	1
CDCA8	ZNF532	0.992	1
CDCA8	Del_2q37.3	0.992	1
CDKN2A	DPYSL4	0.992	1
CDKN2A	IMPA2	0.992	1
CDKN2A	INPP5E	0.992	1
CDKN2A	NEK8	0.992	1
CDKN2A	OR10G3	0.992	1
CDKN2A	PDLIM4	0.992	1
CDKN2A	PRDX5	0.992	1
CDKN2A	PRODH	0.992	1
CDKN2A	SCYL1	0.992	1
CDKN2A	SLC1A7	0.992	1
CDKN2A	SPATA13	0.992	1
CSF1R	CUL3	0.992	1
CSF1R	Del_16q23.3	0.992	1
CXorf23	DPYSL4	0.992	1
CXorf23	IMPA2	0.992	1
CXorf23	INPP5E	0.992	1
CXorf23	NEK8	0.992	1
CXorf23	OR10G3	0.992	1
CXorf23	PDLIM4	0.992	1
CXorf23	PRDX5	0.992	1
CXorf23	PRODH	0.992	1
CXorf23	SCYL1	0.992	1
CXorf23	SLC1A7	0.992	1
CXorf23	SPATA13	0.992	1
CYP2C18	FGFR3	0.992	1
CYP2C18	KRAS	0.992	1
CYP2C18	NOM1	0.992	1
CYP2C18	NTRK3	0.992	1
CYP2C18	PODXL	0.992	1
CYP2C18	SLC23A1	0.992	1
DNAJA3	DPYSL4	0.992	1
DNAJA3	IMPA2	0.992	1
DNAJA3	INPP5E	0.992	1
DNAJA3	NEK8	0.992	1
DNAJA3	OR10G3	0.992	1
DNAJA3	PDLIM4	0.992	1
DNAJA3	PRDX5	0.992	1
DNAJA3	PRODH	0.992	1
DNAJA3	SCYL1	0.992	1
DNAJA3	SLC1A7	0.992	1
DNAJA3	SPATA13	0.992	1
DPYSL4	ECHDC2	0.992	1
DPYSL4	HSPA2	0.992	1
DPYSL4	KIF16B	0.992	1
DPYSL4	KLK10	0.992	1
DPYSL4	PAM	0.992	1
DPYSL4	VCL	0.992	1
DPYSL4	ZNF532	0.992	1
DPYSL4	Del_1q44	0.992	1
DPYSL4	Del_9p23	0.992	1
ECHDC2	IMPA2	0.992	1
ECHDC2	INPP5E	0.992	1
ECHDC2	OR10G3	0.992	1
ECHDC2	PDLIM4	0.992	1
ECHDC2	PRDX5	0.992	1
ECHDC2	PRODH	0.992	1
ECHDC2	SCYL1	0.992	1
ECHDC2	SLC1A7	0.992	1
ECHDC2	SPATA13	0.992	1
EDIL3	7p-Amp	0.992	1
EDIL3	7q-Amp	0.992	1
EGFR	3p-Del	0.992	1
ENO1	Del_11q23.1	0.992	1
F2RL1	FGFR3	0.992	1
F2RL1	KRAS	0.992	1
F2RL1	NOM1	0.992	1
F2RL1	NTRK3	0.992	1
F2RL1	PODXL	0.992	1
F2RL1	SLC23A1	0.992	1
FGFR3	IFNB1	0.992	1
FGFR3	KCNK1	0.992	1
FGFR3	NDUFA3	0.992	1
FGFR3	NKX2-1	0.992	1
FGFR3	ONECUT2	0.992	1
FGFR3	RALB	0.992	1
FGFR3	RCN1	0.992	1
FGFR3	RIN1	0.992	1
FGFR3	RNF113B	0.992	1
FGFR3	RNF144A	0.992	1
FGFR3	SLC14A1	0.992	1
FGFR3	TMEM47	0.992	1
FGFR3	ZNHIT1	0.992	1
FGFR3	9q-Del	0.992	1
GPR50	20p-Amp	0.992	1
GPR50	20q-Amp	0.992	1
GPR50	Del_8p23.2	0.992	1
HSPA2	IMPA2	0.992	1
HSPA2	INPP5E	0.992	1
HSPA2	NEK8	0.992	1
HSPA2	OR10G3	0.992	1
HSPA2	PDLIM4	0.992	1
HSPA2	PRDX5	0.992	1
HSPA2	PRODH	0.992	1
HSPA2	SCYL1	0.992	1
HSPA2	SLC1A7	0.992	1
HSPA2	SPATA13	0.992	1
IFNB1	KRAS	0.992	1
IFNB1	NOM1	0.992	1
IFNB1	NTRK3	0.992	1
IFNB1	PODXL	0.992	1
IFNB1	SLC23A1	0.992	1
IMPA2	KIF16B	0.992	1
IMPA2	KLK10	0.992	1
IMPA2	PAM	0.992	1
IMPA2	VCL	0.992	1
IMPA2	ZNF532	0.992	1
IMPA2	8p-Del	0.992	1
IMPA2	Del_9p23	0.992	1
IMPA2	Del_13q13.2	0.992	1
INPP5E	KIF16B	0.992	1
INPP5E	KLK10	0.992	1
INPP5E	PAM	0.992	1
INPP5E	VCL	0.992	1
INPP5E	ZNF532	0.992	1
KCNK1	KRAS	0.992	1
KCNK1	NOM1	0.992	1
KCNK1	NTRK3	0.992	1
KCNK1	PODXL	0.992	1
KCNK1	SLC23A1	0.992	1
KIF16B	NEK8	0.992	1
KIF16B	OR10G3	0.992	1
KIF16B	PDLIM4	0.992	1
KIF16B	PRDX5	0.992	1
KIF16B	PRODH	0.992	1
KIF16B	SCYL1	0.992	1
KIF16B	SLC1A7	0.992	1
KIF16B	SPATA13	0.992	1
KLK10	NEK8	0.992	1
KLK10	OR10G3	0.992	1
KLK10	PDLIM4	0.992	1
KLK10	PRDX5	0.992	1
KLK10	PRODH	0.992	1
KLK10	SCYL1	0.992	1
KLK10	SLC1A7	0.992	1
KLK10	SPATA13	0.992	1
KRAS	NDUFA3	0.992	1
KRAS	NKX2-1	0.992	1
KRAS	ONECUT2	0.992	1
KRAS	RALB	0.992	1
KRAS	RCN1	0.992	1
KRAS	RIN1	0.992	1
KRAS	RNF113B	0.992	1
KRAS	RNF144A	0.992	1
KRAS	SLC14A1	0.992	1
KRAS	TMEM47	0.992	1
KRAS	ZNHIT1	0.992	1
NASP	7p-Amp	0.992	1
NASP	7q-Amp	0.992	1
NDUFA3	NOM1	0.992	1
NDUFA3	NTRK3	0.992	1
NDUFA3	PODXL	0.992	1
NDUFA3	SLC23A1	0.992	1
NEFH	3q-Amp	0.992	1
NEK8	PAM	0.992	1
NEK8	VCL	0.992	1
NEK8	ZNF532	0.992	1
NF1	PTEN	0.992	1
NF2	PTCH1	0.992	1
NFE2L2	Del_11q23.1	0.992	1
NIPBL	Del_2q37.3	0.992	1
NKX2-1	NOM1	0.992	1
NKX2-1	NTRK3	0.992	1
NKX2-1	PODXL	0.992	1
NKX2-1	SLC23A1	0.992	1
NOM1	ONECUT2	0.992	1
NOM1	RALB	0.992	1
NOM1	RCN1	0.992	1
NOM1	RIN1	0.992	1
NOM1	RNF113B	0.992	1
NOM1	RNF144A	0.992	1
NOM1	SLC14A1	0.992	1
NOM1	TMEM47	0.992	1
NOM1	ZNHIT1	0.992	1
NTRK3	ONECUT2	0.992	1
NTRK3	RALB	0.992	1
NTRK3	RCN1	0.992	1
NTRK3	RIN1	0.992	1
NTRK3	RNF113B	0.992	1
NTRK3	RNF144A	0.992	1
NTRK3	SETD2	0.992	1
NTRK3	SLC14A1	0.992	1
NTRK3	TMEM47	0.992	1
NTRK3	ZNHIT1	0.992	1
ONECUT2	PODXL	0.992	1
ONECUT2	SLC23A1	0.992	1
OR10G3	PAM	0.992	1
OR10G3	VCL	0.992	1
OR10G3	ZNF532	0.992	1
PAM	PDLIM4	0.992	1
PAM	PRDX5	0.992	1
PAM	PRODH	0.992	1
PAM	SCYL1	0.992	1
PAM	SLC1A7	0.992	1
PAM	SPATA13	0.992	1
PDLIM4	VCL	0.992	1
PDLIM4	ZNF532	0.992	1
PDLIM4	8p-Del	0.992	1
PODXL	RALB	0.992	1
PODXL	RCN1	0.992	1
PODXL	RIN1	0.992	1
PODXL	RNF113B	0.992	1
PODXL	RNF144A	0.992	1
PODXL	SLC14A1	0.992	1
PODXL	TMEM47	0.992	1
PODXL	ZNHIT1	0.992	1
PRDX5	VCL	0.992	1
PRDX5	ZNF532	0.992	1
PRODH	VCL	0.992	1
PRODH	ZNF532	0.992	1
PRODH	Del_2q37.3	0.992	1
RALB	SLC23A1	0.992	1
RCN1	SLC23A1	0.992	1
RIN1	SLC23A1	0.992	1
RNF113B	SLC23A1	0.992	1
RNF144A	SLC23A1	0.992	1
SCYL1	VCL	0.992	1
SCYL1	ZNF532	0.992	1
SCYL1	Del_9p23	0.992	1
SLC14A1	SLC23A1	0.992	1
SLC1A7	VCL	0.992	1
SLC1A7	ZNF532	0.992	1
SLC1A7	Del_2q37.3	0.992	1
SLC23A1	TMEM47	0.992	1
SLC23A1	ZNHIT1	0.992	1
SLC23A1	5p-Amp	0.992	1
SLC23A1	5q-Amp	0.992	1
SMARCB1	Del_10q23.31	0.992	1
SPATA13	VCL	0.992	1
SPATA13	ZNF532	0.992	1
SYNE1	Del_9p21.3	0.992	1
TXNIP	ZNF814	0.992	1
WDR52	6p-Del	0.992	1
10q-Del	Del_9p23	0.992	1
18p-Del	8p-Del	0.992	1
18q-Del	Del_2q22.1	0.992	1
18q-Del	Del_3p14.1	0.992	1
AR	KIAA0922	0.993	1
AR	PRKAG2	0.993	1
ARHGAP33	10q-Del	0.993	1
ARHGAP33	Del_9p21.3	0.993	1
ARHGAP35	NIPBL	0.993	1
ARHGAP35	STAG2	0.993	1
BCLAF1	Amp_3q26.32	0.993	1
CACNA1C	CSF1R	0.993	1
CDCA8	Amp_3q26.32	0.993	1
CDK12	NF1	0.993	1
DNMT3A	PBRM1	0.993	1
ECHDC2	Del_3p12.2	0.993	1
EGFR	PIK3CA	0.993	1
ENO1	KDM5C	0.993	1
FAM178A	NF1	0.993	1
FAT1	Del_1p31.1	0.993	1
GALNT7	PCF11	0.993	1
IMPA2	17p-Del	0.993	1
IMPA2	Amp_3q26.32	0.993	1
KDM6A	TXNIP	0.993	1
KIF16B	Del_3p12.2	0.993	1
KLK10	Del_3p12.2	0.993	1
NEFH	ZFYVE26	0.993	1
NEK8	Amp_3q26.32	0.993	1
NF1	WASL	0.993	1
NFE2L2	PARD6B	0.993	1
NFE2L2	SMARCB1	0.993	1
PCF11	SMARCB1	0.993	1
PCK1	17q-Amp	0.993	1
PIK3CA	8p-Del	0.993	1
SLC6A14	Del_1p31.1	0.993	1
SMARCB1	10q-Del	0.993	1
STAG2	Del_9p23	0.993	1
ZC3H3	Del_1p31.1	0.993	1
3q-Amp	21q-Del	0.993	1
10q-Del	Del_9p21.3	0.993	1
3q-Del	Del_11q23.1	0.993	1
Amp_5q35.1	Del_14q31.1	0.993	1
ACSF2	PCK1	0.994	1
ACSF2	ZFYVE26	0.994	1
ARAP3	Amp_2q32.1	0.994	1
ARHGAP33	CYP2C18	0.994	1
ARHGAP33	F2RL1	0.994	1
ARHGAP33	IFNB1	0.994	1
ARHGAP33	KCNK1	0.994	1
ARHGAP33	NDUFA3	0.994	1
ARHGAP33	NKX2-1	0.994	1
ARHGAP33	ONECUT2	0.994	1
ARHGAP33	RALB	0.994	1
ARHGAP33	RCN1	0.994	1
ARHGAP33	RIN1	0.994	1
ARHGAP33	RNF113B	0.994	1
ARHGAP33	RNF144A	0.994	1
ARHGAP33	SLC14A1	0.994	1
ARHGAP33	TMEM47	0.994	1
ARHGAP33	ZNHIT1	0.994	1
ARHGAP33	Del_2q37.3	0.994	1
ARHGAP35	14q-Del	0.994	1
ATM	BRAF	0.994	1
ATM	RIMBP3	0.994	1
BRAF	CYP2C18	0.994	1
BRAF	F2RL1	0.994	1
BRAF	IFNB1	0.994	1
BRAF	KCNK1	0.994	1
BRAF	NDUFA3	0.994	1
BRAF	NKX2-1	0.994	1
BRAF	ONECUT2	0.994	1
BRAF	RALB	0.994	1
BRAF	RCN1	0.994	1
BRAF	RIN1	0.994	1
BRAF	RNF113B	0.994	1
BRAF	RNF144A	0.994	1
BRAF	SLC14A1	0.994	1
BRAF	TMEM47	0.994	1
BRAF	ZNHIT1	0.994	1
C16orf78	9p-Del	0.994	1
CACNA1C	Amp_3q26.32	0.994	1
CARKD	5p-Amp	0.994	1
CARKD	9p-Del	0.994	1
CARKD	9q-Del	0.994	1
CDKN2A	Del_4q34.3	0.994	1
CUL3	NOM1	0.994	1
CYP2C18	GPR50	0.994	1
CYP2C18	MYF6	0.994	1
CYP2C18	NASP	0.994	1
CYP2C18	NUDT11	0.994	1
CYP2C18	RILPL1	0.994	1
CYP2C18	RIMBP3	0.994	1
CYP2C18	STXBP3	0.994	1
CYP2C18	ZNF438	0.994	1
CYP2C18	ZNF521	0.994	1
DNMT3A	PCK1	0.994	1
DPYSL4	9p-Del	0.994	1
DPYSL4	9q-Del	0.994	1
ECHDC2	PBRM1	0.994	1
EDIL3	F2RL1	0.994	1
EDIL3	IFNB1	0.994	1
EDIL3	KCNK1	0.994	1
EDIL3	NDUFA3	0.994	1
EDIL3	NKX2-1	0.994	1
EDIL3	ONECUT2	0.994	1
EDIL3	RALB	0.994	1
EDIL3	RCN1	0.994	1
EDIL3	RIN1	0.994	1
EDIL3	RNF113B	0.994	1
EDIL3	RNF144A	0.994	1
EDIL3	SLC14A1	0.994	1
EDIL3	TMEM47	0.994	1
EDIL3	ZNHIT1	0.994	1
F2RL1	GPR50	0.994	1
F2RL1	MYF6	0.994	1
F2RL1	NASP	0.994	1
F2RL1	NUDT11	0.994	1
F2RL1	RILPL1	0.994	1
F2RL1	RIMBP3	0.994	1
F2RL1	STXBP3	0.994	1
F2RL1	ZNF438	0.994	1
F2RL1	ZNF521	0.994	1
FAT1	GPR50	0.994	1
FAT1	STXBP3	0.994	1
GLS	PCF11	0.994	1
GPR50	IFNB1	0.994	1
GPR50	KCNK1	0.994	1
GPR50	NDUFA3	0.994	1
GPR50	NKX2-1	0.994	1
GPR50	ONECUT2	0.994	1
GPR50	RALB	0.994	1
GPR50	RCN1	0.994	1
GPR50	RIN1	0.994	1
GPR50	RNF113B	0.994	1
GPR50	RNF144A	0.994	1
GPR50	SMARCA4	0.994	1
GPR50	TMEM47	0.994	1
GPR50	ZNHIT1	0.994	1
GPR50	8p-Del	0.994	1
GPR50	Del_9p23	0.994	1
IFNB1	MYF6	0.994	1
IFNB1	NASP	0.994	1
IFNB1	NUDT11	0.994	1
IFNB1	RILPL1	0.994	1
IFNB1	RIMBP3	0.994	1
IFNB1	STXBP3	0.994	1
IFNB1	ZNF438	0.994	1
IFNB1	ZNF521	0.994	1
IMPA2	SETD2	0.994	1
INPP5E	5p-Amp	0.994	1
INPP5E	5q-Amp	0.994	1
KCNK1	MYF6	0.994	1
KCNK1	NASP	0.994	1
KCNK1	NUDT11	0.994	1
KCNK1	RILPL1	0.994	1
KCNK1	RIMBP3	0.994	1
KCNK1	STXBP3	0.994	1
KCNK1	ZNF438	0.994	1
KCNK1	ZNF521	0.994	1
KLK10	PBRM1	0.994	1
MTOR	Del_9p23	0.994	1
MYF6	NDUFA3	0.994	1
MYF6	NKX2-1	0.994	1
MYF6	ONECUT2	0.994	1
MYF6	RALB	0.994	1
MYF6	RCN1	0.994	1
MYF6	RIN1	0.994	1
MYF6	RNF113B	0.994	1
MYF6	RNF144A	0.994	1
MYF6	SLC14A1	0.994	1
MYF6	TMEM47	0.994	1
MYF6	ZNHIT1	0.994	1
NASP	NDUFA3	0.994	1
NASP	NKX2-1	0.994	1
NASP	ONECUT2	0.994	1
NASP	RALB	0.994	1
NASP	RCN1	0.994	1
NASP	RIN1	0.994	1
NASP	RNF113B	0.994	1
NASP	RNF144A	0.994	1
NASP	SLC14A1	0.994	1
NASP	TMEM47	0.994	1
NASP	ZNHIT1	0.994	1
NASP	Del_9p23	0.994	1
NDUFA3	NUDT11	0.994	1
NDUFA3	RILPL1	0.994	1
NDUFA3	RIMBP3	0.994	1
NDUFA3	STXBP3	0.994	1
NDUFA3	ZNF438	0.994	1
NDUFA3	ZNF521	0.994	1
NEK8	5p-Amp	0.994	1
NEK8	5q-Amp	0.994	1
NEK8	21q-Del	0.994	1
NF2	PODXL	0.994	1
NFE2L2	18q-Del	0.994	1
NKX2-1	NUDT11	0.994	1
NKX2-1	RILPL1	0.994	1
NKX2-1	RIMBP3	0.994	1
NKX2-1	STXBP3	0.994	1
NKX2-1	ZNF438	0.994	1
NKX2-1	ZNF521	0.994	1
NTRK3	3q-Amp	0.994	1
NTRK3	Del_16q23.3	0.994	1
NUDT11	ONECUT2	0.994	1
NUDT11	RALB	0.994	1
NUDT11	RCN1	0.994	1
NUDT11	RIN1	0.994	1
NUDT11	RNF113B	0.994	1
NUDT11	RNF144A	0.994	1
NUDT11	SLC14A1	0.994	1
NUDT11	TMEM47	0.994	1
NUDT11	ZNHIT1	0.994	1
ONECUT2	RILPL1	0.994	1
ONECUT2	RIMBP3	0.994	1
ONECUT2	STXBP3	0.994	1
ONECUT2	ZNF438	0.994	1
ONECUT2	ZNF521	0.994	1
PDLIM4	5p-Amp	0.994	1
PDLIM4	5q-Amp	0.994	1
PRODH	5p-Amp	0.994	1
PRODH	5q-Amp	0.994	1
PRODH	21q-Del	0.994	1
PTEN	6q-Del	0.994	1
RALB	RILPL1	0.994	1
RALB	RIMBP3	0.994	1
RALB	STXBP3	0.994	1
RALB	ZNF438	0.994	1
RALB	ZNF521	0.994	1
RCN1	RILPL1	0.994	1
RCN1	RIMBP3	0.994	1
RCN1	STXBP3	0.994	1
RCN1	ZNF438	0.994	1
RCN1	ZNF521	0.994	1
RILPL1	RIN1	0.994	1
RILPL1	RNF113B	0.994	1
RILPL1	RNF144A	0.994	1
RILPL1	SLC14A1	0.994	1
RILPL1	TMEM47	0.994	1
RILPL1	ZNHIT1	0.994	1
RILPL1	Del_2q37.3	0.994	1
RIMBP3	RIN1	0.994	1
RIMBP3	RNF113B	0.994	1
RIMBP3	RNF144A	0.994	1
RIMBP3	SLC14A1	0.994	1
RIMBP3	SMARCA4	0.994	1
RIMBP3	TMEM47	0.994	1
RIMBP3	ZNHIT1	0.994	1
RIMBP3	Del_1q44	0.994	1
RIMBP3	Del_2q37.3	0.994	1
RIN1	STXBP3	0.994	1
RIN1	ZNF438	0.994	1
RIN1	ZNF521	0.994	1
RNF113B	STXBP3	0.994	1
RNF113B	ZNF438	0.994	1
RNF113B	ZNF521	0.994	1
RNF144A	STXBP3	0.994	1
RNF144A	ZNF438	0.994	1
RNF144A	ZNF521	0.994	1
SCYL1	9p-Del	0.994	1
SETD2	Del_16q23.3	0.994	1
SLC14A1	STXBP3	0.994	1
SLC14A1	ZNF438	0.994	1
SLC14A1	ZNF521	0.994	1
SLC1A7	5p-Amp	0.994	1
SLC1A7	5q-Amp	0.994	1
SLC1A7	21q-Del	0.994	1
SMARCA4	ZNF438	0.994	1
SMARCB1	Del_4q34.3	0.994	1
STXBP3	TMEM47	0.994	1
STXBP3	ZNHIT1	0.994	1
TMEM47	ZNF438	0.994	1
TMEM47	ZNF521	0.994	1
ZNF438	ZNHIT1	0.994	1
ZNF521	ZNHIT1	0.994	1
ZNF814	Del_14q31.1	0.994	1
18p-Del	Del_3p12.2	0.994	1
1p-Del	Del_9p23	0.994	1
3q-Del	Del_9p23	0.994	1
9p-Del	Del_16q23.3	0.994	1
Amp_2q32.1	Amp_Xq11.2	0.994	1
Amp_5q35.1	Amp_Xq11.2	0.994	1
Del_3p21.2	Del_4q34.3	0.994	1
Del_4q34.3	Del_8p23.2	0.994	1
Del_4q34.3	Del_10q23.31	0.994	1
ACSF2	FAM178A	0.995	1
ACSF2	GLS	0.995	1
ADAM28	C16orf78	0.995	1
ADAM28	C9orf171	0.995	1
ADAM28	CARKD	0.995	1
ADAM28	CDCA8	0.995	1
ADAM28	DPYSL4	0.995	1
ADAM28	IMPA2	0.995	1
ADAM28	INPP5E	0.995	1
ADAM28	NEK8	0.995	1
ADAM28	OR10G3	0.995	1
ADAM28	PDLIM4	0.995	1
ADAM28	PRDX5	0.995	1
ADAM28	PRODH	0.995	1
ADAM28	SCYL1	0.995	1
ADAM28	SLC1A7	0.995	1
ADAM28	SPATA13	0.995	1
AR	KRAS	0.995	1
AR	NTRK3	0.995	1
ARAP3	CYP2C18	0.995	1
ARAP3	F2RL1	0.995	1
ARAP3	IFNB1	0.995	1
ARAP3	KCNK1	0.995	1
ARAP3	NDUFA3	0.995	1
ARAP3	NKX2-1	0.995	1
ARAP3	ONECUT2	0.995	1
ARAP3	RALB	0.995	1
ARAP3	RCN1	0.995	1
ARAP3	RNF113B	0.995	1
ARAP3	RNF144A	0.995	1
ARAP3	SLC14A1	0.995	1
ARAP3	TMEM47	0.995	1
ARAP3	ZNHIT1	0.995	1
ARAP3	2q-Amp	0.995	1
ARID1A	RILPL1	0.995	1
ARID1A	SYNE1	0.995	1
ATM	NIPBL	0.995	1
BCLAF1	PARD6B	0.995	1
BCLAF1	Del_11q23.1	0.995	1
C16orf78	C9orf171	0.995	1
C16orf78	CARKD	0.995	1
C16orf78	CDCA8	0.995	1
C16orf78	DPYSL4	0.995	1
C16orf78	IMPA2	0.995	1
C16orf78	INPP5E	0.995	1
C16orf78	NEK8	0.995	1
C16orf78	OR10G3	0.995	1
C16orf78	PDLIM4	0.995	1
C16orf78	PRDX5	0.995	1
C16orf78	PRODH	0.995	1
C16orf78	SCYL1	0.995	1
C16orf78	SLC1A7	0.995	1
C16orf78	SPATA13	0.995	1
C16orf78	18q-Del	0.995	1
C9orf171	CARKD	0.995	1
C9orf171	CDCA8	0.995	1
C9orf171	DPYSL4	0.995	1
C9orf171	IMPA2	0.995	1
C9orf171	INPP5E	0.995	1
C9orf171	NEK8	0.995	1
C9orf171	OR10G3	0.995	1
C9orf171	PDLIM4	0.995	1
C9orf171	PRDX5	0.995	1
C9orf171	PRODH	0.995	1
C9orf171	SCYL1	0.995	1
C9orf171	SLC1A7	0.995	1
C9orf171	SPATA13	0.995	1
CACNA1C	NTRK3	0.995	1
CARKD	CDCA8	0.995	1
CARKD	DPYSL4	0.995	1
CARKD	IMPA2	0.995	1
CARKD	INPP5E	0.995	1
CARKD	NEK8	0.995	1
CARKD	OR10G3	0.995	1
CARKD	PDLIM4	0.995	1
CARKD	PRDX5	0.995	1
CARKD	PRODH	0.995	1
CARKD	SCYL1	0.995	1
CARKD	SLC1A7	0.995	1
CARKD	SPATA13	0.995	1
CDCA8	DPYSL4	0.995	1
CDCA8	IMPA2	0.995	1
CDCA8	INPP5E	0.995	1
CDCA8	NEK8	0.995	1
CDCA8	OR10G3	0.995	1
CDCA8	PDLIM4	0.995	1
CDCA8	PRDX5	0.995	1
CDCA8	PRODH	0.995	1
CDCA8	SCYL1	0.995	1
CDCA8	SLC1A7	0.995	1
CDCA8	SPATA13	0.995	1
CSK	CYP2C18	0.995	1
CSK	F2RL1	0.995	1
CSK	IFNB1	0.995	1
CSK	KCNK1	0.995	1
CSK	NDUFA3	0.995	1
CSK	NKX2-1	0.995	1
CSK	ONECUT2	0.995	1
CSK	RALB	0.995	1
CSK	RCN1	0.995	1
CSK	RIN1	0.995	1
CSK	RNF113B	0.995	1
CSK	RNF144A	0.995	1
CSK	SLC14A1	0.995	1
CSK	TMEM47	0.995	1
CSK	ZNHIT1	0.995	1
CXorf23	SYNE1	0.995	1
CYP2C18	ENO1	0.995	1
CYP2C18	FZR1	0.995	1
CYP2C18	SLC6A14	0.995	1
CYP2C18	TCEB1	0.995	1
CYP2C18	ZC3H3	0.995	1
CYP2C18	Amp_Xq11.2	0.995	1
DNMT3A	WASL	0.995	1
DPYSL4	IMPA2	0.995	1
DPYSL4	INPP5E	0.995	1
DPYSL4	NEK8	0.995	1
DPYSL4	OR10G3	0.995	1
DPYSL4	PDLIM4	0.995	1
DPYSL4	PRDX5	0.995	1
DPYSL4	PRODH	0.995	1
DPYSL4	SCYL1	0.995	1
DPYSL4	SLC1A7	0.995	1
ECHDC2	3q-Del	0.995	1
EDIL3	Amp_3q26.32	0.995	1
ENO1	F2RL1	0.995	1
ENO1	IFNB1	0.995	1
ENO1	KCNK1	0.995	1
ENO1	NDUFA3	0.995	1
ENO1	NKX2-1	0.995	1
ENO1	ONECUT2	0.995	1
ENO1	RALB	0.995	1
ENO1	RCN1	0.995	1
ENO1	RIN1	0.995	1
ENO1	RNF113B	0.995	1
ENO1	RNF144A	0.995	1
ENO1	SLC14A1	0.995	1
ENO1	TMEM47	0.995	1
ENO1	ZNHIT1	0.995	1
EPS15L1	PARD6B	0.995	1
F2RL1	FZR1	0.995	1
F2RL1	SLC6A14	0.995	1
F2RL1	TCEB1	0.995	1
F2RL1	ZC3H3	0.995	1
F2RL1	Amp_Xq11.2	0.995	1
FAM178A	TP53	0.995	1
FAT1	STAG2	0.995	1
FAT1	Del_11q23.1	0.995	1
FZR1	IFNB1	0.995	1
FZR1	NDUFA3	0.995	1
FZR1	NKX2-1	0.995	1
FZR1	ONECUT2	0.995	1
FZR1	RALB	0.995	1
FZR1	RCN1	0.995	1
FZR1	RIN1	0.995	1
FZR1	RNF113B	0.995	1
FZR1	RNF144A	0.995	1
FZR1	SLC14A1	0.995	1
FZR1	TMEM47	0.995	1
FZR1	ZNHIT1	0.995	1
IFNB1	SLC6A14	0.995	1
IFNB1	TCEB1	0.995	1
IFNB1	ZC3H3	0.995	1
IFNB1	Amp_Xq11.2	0.995	1
IMPA2	INPP5E	0.995	1
IMPA2	NEK8	0.995	1
IMPA2	OR10G3	0.995	1
IMPA2	PDLIM4	0.995	1
IMPA2	PRDX5	0.995	1
IMPA2	PRODH	0.995	1
IMPA2	SCYL1	0.995	1
IMPA2	SLC1A7	0.995	1
IMPA2	SPATA13	0.995	1
IMPA2	3q-Amp	0.995	1
IMPA2	13q-Del	0.995	1
IMPA2	Del_2q22.1	0.995	1
INPP5E	NEK8	0.995	1
INPP5E	OR10G3	0.995	1
INPP5E	PRDX5	0.995	1
INPP5E	PRODH	0.995	1
INPP5E	SCYL1	0.995	1
INPP5E	SLC1A7	0.995	1
INPP5E	SPATA13	0.995	1
KCNK1	SLC6A14	0.995	1
KCNK1	TCEB1	0.995	1
KCNK1	ZC3H3	0.995	1
KCNK1	Amp_Xq11.2	0.995	1
KDM5C	Del_3p14.1	0.995	1
KIF16B	3q-Del	0.995	1
MTOR	PCK1	0.995	1
NDUFA3	SLC6A14	0.995	1
NDUFA3	TCEB1	0.995	1
NDUFA3	ZC3H3	0.995	1
NDUFA3	Amp_Xq11.2	0.995	1
NEK8	OR10G3	0.995	1
NEK8	PDLIM4	0.995	1
NEK8	PRDX5	0.995	1
NEK8	PRODH	0.995	1
NEK8	SCYL1	0.995	1
NEK8	SLC1A7	0.995	1
NEK8	SPATA13	0.995	1
NEK8	3q-Amp	0.995	1
NFE2L2	18p-Del	0.995	1
NIPBL	NTRK3	0.995	1
NKX2-1	SLC6A14	0.995	1
NKX2-1	TCEB1	0.995	1
NKX2-1	ZC3H3	0.995	1
NKX2-1	Amp_Xq11.2	0.995	1
ONECUT2	SLC6A14	0.995	1
ONECUT2	TCEB1	0.995	1
ONECUT2	ZC3H3	0.995	1
ONECUT2	Amp_Xq11.2	0.995	1
OR10G3	PDLIM4	0.995	1
OR10G3	PRDX5	0.995	1
OR10G3	PRODH	0.995	1
OR10G3	SCYL1	0.995	1
OR10G3	SLC1A7	0.995	1
OR10G3	SPATA13	0.995	1
PAM	Amp_17q24.3	0.995	1
PCK1	17p-Amp	0.995	1
PDLIM4	PRDX5	0.995	1
PDLIM4	PRODH	0.995	1
PDLIM4	SCYL1	0.995	1
PDLIM4	SLC1A7	0.995	1
PDLIM4	SPATA13	0.995	1
PRDX5	PRODH	0.995	1
PRDX5	SCYL1	0.995	1
PRDX5	SLC1A7	0.995	1
PRDX5	SPATA13	0.995	1
PRODH	SCYL1	0.995	1
PRODH	SPATA13	0.995	1
PRODH	3q-Amp	0.995	1
PRODH	Del_2q22.1	0.995	1
PTEN	Del_1p36.31	0.995	1
RAI1	3q-Amp	0.995	1
RALB	SLC6A14	0.995	1
RALB	TCEB1	0.995	1
RALB	ZC3H3	0.995	1
RALB	Amp_Xq11.2	0.995	1
RCN1	SLC6A14	0.995	1
RCN1	TCEB1	0.995	1
RCN1	ZC3H3	0.995	1
RCN1	Amp_Xq11.2	0.995	1
RIN1	SLC6A14	0.995	1
RIN1	TCEB1	0.995	1
RIN1	ZC3H3	0.995	1
RIN1	Amp_Xq11.2	0.995	1
RNF113B	SLC6A14	0.995	1
RNF113B	TCEB1	0.995	1
RNF113B	ZC3H3	0.995	1
RNF113B	Amp_Xq11.2	0.995	1
RNF144A	SLC6A14	0.995	1
RNF144A	TCEB1	0.995	1
RNF144A	ZC3H3	0.995	1
RNF144A	Amp_Xq11.2	0.995	1
SCYL1	SPATA13	0.995	1
SCYL1	18q-Del	0.995	1
SETD2	Del_4q34.3	0.995	1
SLC14A1	SLC6A14	0.995	1
SLC14A1	TCEB1	0.995	1
SLC14A1	ZC3H3	0.995	1
SLC14A1	Amp_Xq11.2	0.995	1
SLC1A7	SPATA13	0.995	1
SLC1A7	3q-Amp	0.995	1
SLC1A7	Del_2q22.1	0.995	1
SLC23A1	STAG2	0.995	1
SLC6A14	TMEM47	0.995	1
SLC6A14	ZNHIT1	0.995	1
SMARCA4	3p-Amp	0.995	1
SPATA13	18q-Del	0.995	1
TCEB1	TMEM47	0.995	1
TCEB1	ZNHIT1	0.995	1
TMEM47	ZC3H3	0.995	1
TMEM47	Amp_Xq11.2	0.995	1
WASL	20p-Amp	0.995	1
ZC3H3	ZNHIT1	0.995	1
ZNHIT1	Amp_Xq11.2	0.995	1
2q-Amp	Amp_Xq11.2	0.995	1
5p-Amp	8p-Del	0.995	1
5q-Amp	8p-Del	0.995	1
10q-Del	Del_3p12.2	0.995	1
18p-Del	Del_2q22.1	0.995	1
18q-Del	Del_3p12.2	0.995	1
1p-Del	3q-Del	0.995	1
9p-Del	Del_10q23.31	0.995	1
9q-Del	Del_8p23.2	0.995	1
Del_2q22.1	Del_9p23	0.995	1
Del_3p12.2	Del_10q23.31	0.995	1
ACSF2	KIAA0922	0.996	1
ALMS1	FGFR3	0.996	1
ALMS1	PODXL	0.996	1
ARHGAP33	5p-Amp	0.996	1
ARHGAP33	5q-Amp	0.996	1
ARHGAP33	21q-Del	0.996	1
ARHGAP33	Del_16q23.3	0.996	1
C16orf78	18p-Del	0.996	1
CDK12	Del_9p21.3	0.996	1
CDKN2A	CYP2C18	0.996	1
CDKN2A	F2RL1	0.996	1
CDKN2A	IFNB1	0.996	1
CDKN2A	KCNK1	0.996	1
CDKN2A	NDUFA3	0.996	1
CDKN2A	NKX2-1	0.996	1
CDKN2A	ONECUT2	0.996	1
CDKN2A	RALB	0.996	1
CDKN2A	RCN1	0.996	1
CDKN2A	RIN1	0.996	1
CDKN2A	RNF113B	0.996	1
CDKN2A	RNF144A	0.996	1
CDKN2A	SLC14A1	0.996	1
CDKN2A	TMEM47	0.996	1
CDKN2A	ZNHIT1	0.996	1
CSF1R	DNMT3A	0.996	1
CSF1R	RAI1	0.996	1
CXorf23	CYP2C18	0.996	1
CXorf23	F2RL1	0.996	1
CXorf23	IFNB1	0.996	1
CXorf23	KCNK1	0.996	1
CXorf23	NDUFA3	0.996	1
CXorf23	NKX2-1	0.996	1
CXorf23	ONECUT2	0.996	1
CXorf23	RALB	0.996	1
CXorf23	RCN1	0.996	1
CXorf23	RIN1	0.996	1
CXorf23	RNF113B	0.996	1
CXorf23	RNF144A	0.996	1
CXorf23	SLC14A1	0.996	1
CXorf23	TMEM47	0.996	1
CXorf23	ZNHIT1	0.996	1
CYP2C18	DNAJA3	0.996	1
CYP2C18	ECHDC2	0.996	1
CYP2C18	HSPA2	0.996	1
CYP2C18	KIF16B	0.996	1
CYP2C18	KLK10	0.996	1
CYP2C18	PAM	0.996	1
CYP2C18	VCL	0.996	1
CYP2C18	ZNF532	0.996	1
DNAJA3	F2RL1	0.996	1
DNAJA3	IFNB1	0.996	1
DNAJA3	KCNK1	0.996	1
DNAJA3	NDUFA3	0.996	1
DNAJA3	NKX2-1	0.996	1
DNAJA3	ONECUT2	0.996	1
DNAJA3	RALB	0.996	1
DNAJA3	RCN1	0.996	1
DNAJA3	RIN1	0.996	1
DNAJA3	RNF113B	0.996	1
DNAJA3	RNF144A	0.996	1
DNAJA3	SLC14A1	0.996	1
DNAJA3	TMEM47	0.996	1
DNAJA3	ZNHIT1	0.996	1
ECHDC2	F2RL1	0.996	1
ECHDC2	IFNB1	0.996	1
ECHDC2	KCNK1	0.996	1
ECHDC2	NDUFA3	0.996	1
ECHDC2	NKX2-1	0.996	1
ECHDC2	ONECUT2	0.996	1
ECHDC2	RALB	0.996	1
ECHDC2	RCN1	0.996	1
ECHDC2	RIN1	0.996	1
ECHDC2	RNF113B	0.996	1
ECHDC2	RNF144A	0.996	1
ECHDC2	SLC14A1	0.996	1
ECHDC2	TMEM47	0.996	1
ECHDC2	ZNHIT1	0.996	1
EDIL3	SETD2	0.996	1
ENO1	FAT1	0.996	1
ENO1	Del_10q23.31	0.996	1
F2RL1	HSPA2	0.996	1
F2RL1	KIF16B	0.996	1
F2RL1	KLK10	0.996	1
F2RL1	PAM	0.996	1
F2RL1	VCL	0.996	1
F2RL1	ZNF532	0.996	1
FAT1	ZC3H3	0.996	1
GALNT7	SMARCB1	0.996	1
GALNT7	ZFYVE26	0.996	1
GPR50	9p-Del	0.996	1
GPR50	9q-Del	0.996	1
HSPA2	IFNB1	0.996	1
HSPA2	KCNK1	0.996	1
HSPA2	NDUFA3	0.996	1
HSPA2	NKX2-1	0.996	1
HSPA2	ONECUT2	0.996	1
HSPA2	RALB	0.996	1
HSPA2	RCN1	0.996	1
HSPA2	RIN1	0.996	1
HSPA2	RNF113B	0.996	1
HSPA2	RNF144A	0.996	1
HSPA2	SLC14A1	0.996	1
HSPA2	TMEM47	0.996	1
HSPA2	ZNHIT1	0.996	1
IFNB1	KIF16B	0.996	1
IFNB1	KLK10	0.996	1
IFNB1	PAM	0.996	1
IFNB1	VCL	0.996	1
IFNB1	ZNF532	0.996	1
KCNK1	KIF16B	0.996	1
KCNK1	KLK10	0.996	1
KCNK1	PAM	0.996	1
KCNK1	VCL	0.996	1
KCNK1	ZNF532	0.996	1
KDM6A	SLC23A1	0.996	1
KIF16B	NDUFA3	0.996	1
KIF16B	NKX2-1	0.996	1
KIF16B	ONECUT2	0.996	1
KIF16B	RALB	0.996	1
KIF16B	RCN1	0.996	1
KIF16B	RIN1	0.996	1
KIF16B	RNF113B	0.996	1
KIF16B	RNF144A	0.996	1
KIF16B	SLC14A1	0.996	1
KIF16B	TMEM47	0.996	1
KIF16B	ZNHIT1	0.996	1
KLK10	NDUFA3	0.996	1
KLK10	NKX2-1	0.996	1
KLK10	ONECUT2	0.996	1
KLK10	RALB	0.996	1
KLK10	RCN1	0.996	1
KLK10	RIN1	0.996	1
KLK10	RNF113B	0.996	1
KLK10	RNF144A	0.996	1
KLK10	SLC14A1	0.996	1
KLK10	TMEM47	0.996	1
KLK10	ZNHIT1	0.996	1
MET	Del_4q34.3	0.996	1
MTOR	TXNIP	0.996	1
MTOR	WASL	0.996	1
MYF6	21q-Del	0.996	1
NASP	NF2	0.996	1
NDUFA3	PAM	0.996	1
NDUFA3	VCL	0.996	1
NDUFA3	ZNF532	0.996	1
NEFH	3p-Amp	0.996	1
NEK8	3p-Amp	0.996	1
NF1	NOM1	0.996	1
NF1	NTRK3	0.996	1
NF2	NUDT11	0.996	1
NFE2L2	PTCH1	0.996	1
NKX2-1	PAM	0.996	1
NKX2-1	VCL	0.996	1
NKX2-1	ZNF532	0.996	1
NTRK3	3p-Amp	0.996	1
NUDT11	5q-Amp	0.996	1
ONECUT2	PAM	0.996	1
ONECUT2	VCL	0.996	1
ONECUT2	ZNF532	0.996	1
PAM	RALB	0.996	1
PAM	RCN1	0.996	1
PAM	RIN1	0.996	1
PAM	RNF113B	0.996	1
PAM	RNF144A	0.996	1
PAM	SLC14A1	0.996	1
PAM	TMEM47	0.996	1
PAM	ZNHIT1	0.996	1
PAM	17q-Amp	0.996	1
PRODH	3p-Amp	0.996	1
RALB	VCL	0.996	1
RALB	ZNF532	0.996	1
RCN1	VCL	0.996	1
RCN1	ZNF532	0.996	1
RIN1	VCL	0.996	1
RIN1	ZNF532	0.996	1
RNF113B	VCL	0.996	1
RNF113B	ZNF532	0.996	1
RNF144A	VCL	0.996	1
RNF144A	ZNF532	0.996	1
SCYL1	18p-Del	0.996	1
SLC14A1	VCL	0.996	1
SLC14A1	ZNF532	0.996	1
SLC1A7	3p-Amp	0.996	1
SLC6A14	Del_8p23.2	0.996	1
SMARCA4	Amp_17q24.3	0.996	1
SPATA13	18p-Del	0.996	1
STAG2	Del_4q34.3	0.996	1
STXBP3	Amp_17q24.3	0.996	1
SYNE1	Del_9p23	0.996	1
TMEM47	VCL	0.996	1
TMEM47	ZNF532	0.996	1
VCL	ZNHIT1	0.996	1
VCL	Del_11q23.1	0.996	1
WASL	20q-Amp	0.996	1
ZNF438	5p-Amp	0.996	1
ZNF438	5q-Amp	0.996	1
ZNF532	ZNHIT1	0.996	1
ZNF814	14q-Del	0.996	1
5p-Amp	3q-Del	0.996	1
5q-Amp	3q-Del	0.996	1
5q-Amp	Del_3p21.2	0.996	1
10q-Del	Del_4q34.3	0.996	1
18p-Del	Del_14q31.1	0.996	1
18q-Del	8p-Del	0.996	1
18q-Del	Del_1q44	0.996	1
21q-Del	9p-Del	0.996	1
3q-Del	9q-Del	0.996	1
3q-Del	Del_1p36.31	0.996	1
Amp_Xq11.2	Del_8p23.2	0.996	1
Del_1q44	Del_9p21.3	0.996	1
ADAM28	CYP2C18	0.997	1
ADAM28	F2RL1	0.997	1
ADAM28	IFNB1	0.997	1
ADAM28	KCNK1	0.997	1
ADAM28	NDUFA3	0.997	1
ADAM28	NKX2-1	0.997	1
ADAM28	ONECUT2	0.997	1
ADAM28	RALB	0.997	1
ADAM28	RCN1	0.997	1
ADAM28	RIN1	0.997	1
ADAM28	RNF113B	0.997	1
ADAM28	RNF144A	0.997	1
ADAM28	SLC14A1	0.997	1
ADAM28	TMEM47	0.997	1
ADAM28	ZNHIT1	0.997	1
ADCY8	GLS	0.997	1
AR	MYF6	0.997	1
AR	ZNF438	0.997	1
AR	12p-Amp	0.997	1
ARAP3	3p-Del	0.997	1
ARAP3	Del_2q37.3	0.997	1
ARAP3	Del_3p14.1	0.997	1
ARHGAP33	NF1	0.997	1
ARHGAP33	NIPBL	0.997	1
ARHGAP33	3q-Amp	0.997	1
ARHGAP33	Del_2q22.1	0.997	1
ATM	5p-Amp	0.997	1
ATM	5q-Amp	0.997	1
BCLAF1	Del_2q22.1	0.997	1
C16orf78	CYP2C18	0.997	1
C16orf78	F2RL1	0.997	1
C16orf78	IFNB1	0.997	1
C16orf78	KCNK1	0.997	1
C16orf78	NDUFA3	0.997	1
C16orf78	NKX2-1	0.997	1
C16orf78	ONECUT2	0.997	1
C16orf78	RALB	0.997	1
C16orf78	RCN1	0.997	1
C16orf78	RIN1	0.997	1
C16orf78	RNF113B	0.997	1
C16orf78	RNF144A	0.997	1
C16orf78	SLC14A1	0.997	1
C16orf78	TMEM47	0.997	1
C16orf78	ZNHIT1	0.997	1
C9orf171	CYP2C18	0.997	1
C9orf171	F2RL1	0.997	1
C9orf171	IFNB1	0.997	1
C9orf171	KCNK1	0.997	1
C9orf171	NDUFA3	0.997	1
C9orf171	NKX2-1	0.997	1
C9orf171	ONECUT2	0.997	1
C9orf171	RALB	0.997	1
C9orf171	RCN1	0.997	1
C9orf171	RIN1	0.997	1
C9orf171	RNF144A	0.997	1
C9orf171	SLC14A1	0.997	1
C9orf171	TMEM47	0.997	1
CACNA1C	EDIL3	0.997	1
CACNA1C	NF2	0.997	1
CARKD	CYP2C18	0.997	1
CARKD	F2RL1	0.997	1
CARKD	IFNB1	0.997	1
CARKD	KCNK1	0.997	1
CARKD	NDUFA3	0.997	1
CARKD	NKX2-1	0.997	1
CARKD	ONECUT2	0.997	1
CARKD	RALB	0.997	1
CARKD	RCN1	0.997	1
CARKD	RIN1	0.997	1
CARKD	RNF113B	0.997	1
CARKD	RNF144A	0.997	1
CARKD	SLC14A1	0.997	1
CARKD	TMEM47	0.997	1
CARKD	ZNHIT1	0.997	1
CDCA8	CYP2C18	0.997	1
CDCA8	F2RL1	0.997	1
CDCA8	IFNB1	0.997	1
CDCA8	KCNK1	0.997	1
CDCA8	NDUFA3	0.997	1
CDCA8	NKX2-1	0.997	1
CDCA8	ONECUT2	0.997	1
CDCA8	RALB	0.997	1
CDCA8	RCN1	0.997	1
CDCA8	RIN1	0.997	1
CDCA8	RNF113B	0.997	1
CDCA8	RNF144A	0.997	1
CDCA8	SLC14A1	0.997	1
CDCA8	TMEM47	0.997	1
CDCA8	ZNHIT1	0.997	1
CDK12	FAM178A	0.997	1
CDK12	GALNT7	0.997	1
CDKN2A	2q-Amp	0.997	1
CDKN2A	Amp_2q32.1	0.997	1
CYP2C18	DPYSL4	0.997	1
CYP2C18	IMPA2	0.997	1
CYP2C18	INPP5E	0.997	1
CYP2C18	NEK8	0.997	1
CYP2C18	OR10G3	0.997	1
CYP2C18	PDLIM4	0.997	1
CYP2C18	PRDX5	0.997	1
CYP2C18	PRODH	0.997	1
CYP2C18	SCYL1	0.997	1
CYP2C18	SLC1A7	0.997	1
CYP2C18	SPATA13	0.997	1
DNAJA3	MET	0.997	1
DNMT3A	SLC23A1	0.997	1
DNMT3A	12p-Amp	0.997	1
DPYSL4	F2RL1	0.997	1
DPYSL4	IFNB1	0.997	1
DPYSL4	KCNK1	0.997	1
DPYSL4	NDUFA3	0.997	1
DPYSL4	NKX2-1	0.997	1
DPYSL4	ONECUT2	0.997	1
DPYSL4	RALB	0.997	1
DPYSL4	RCN1	0.997	1
DPYSL4	RIN1	0.997	1
DPYSL4	RNF113B	0.997	1
DPYSL4	RNF144A	0.997	1
DPYSL4	SLC14A1	0.997	1
DPYSL4	TMEM47	0.997	1
DPYSL4	ZNHIT1	0.997	1
EDIL3	NF1	0.997	1
EGFR	EPS15L1	0.997	1
EGFR	PBRM1	0.997	1
EGFR	Del_8p23.2	0.997	1
EPS15L1	KIAA0922	0.997	1
F2RL1	IMPA2	0.997	1
F2RL1	INPP5E	0.997	1
F2RL1	NEK8	0.997	1
F2RL1	OR10G3	0.997	1
F2RL1	PDLIM4	0.997	1
F2RL1	PRDX5	0.997	1
F2RL1	PRODH	0.997	1
F2RL1	SPATA13	0.997	1
FAM178A	GALNT7	0.997	1
FAM178A	PCK1	0.997	1
FAM178A	SYNE1	0.997	1
FAT1	Del_1p36.31	0.997	1
FGFR3	NFE2L2	0.997	1
FGFR3	RAI1	0.997	1
FZR1	Del_9p21.3	0.997	1
GALNT7	WASL	0.997	1
GLS	ZFYVE26	0.997	1
GLS	16p-Amp	0.997	1
IFNB1	IMPA2	0.997	1
IFNB1	INPP5E	0.997	1
IFNB1	NEK8	0.997	1
IFNB1	OR10G3	0.997	1
IFNB1	PDLIM4	0.997	1
IFNB1	PRDX5	0.997	1
IFNB1	PRODH	0.997	1
IFNB1	SCYL1	0.997	1
IFNB1	SLC1A7	0.997	1
IFNB1	SPATA13	0.997	1
IMPA2	KCNK1	0.997	1
IMPA2	NDUFA3	0.997	1
IMPA2	NKX2-1	0.997	1
IMPA2	ONECUT2	0.997	1
IMPA2	RALB	0.997	1
IMPA2	RCN1	0.997	1
IMPA2	RIN1	0.997	1
IMPA2	RNF113B	0.997	1
IMPA2	RNF144A	0.997	1
IMPA2	SLC14A1	0.997	1
IMPA2	TMEM47	0.997	1
IMPA2	ZNHIT1	0.997	1
INPP5E	KCNK1	0.997	1
INPP5E	NDUFA3	0.997	1
INPP5E	NKX2-1	0.997	1
INPP5E	ONECUT2	0.997	1
INPP5E	RALB	0.997	1
INPP5E	RCN1	0.997	1
INPP5E	RIN1	0.997	1
INPP5E	RNF113B	0.997	1
INPP5E	RNF144A	0.997	1
INPP5E	SLC14A1	0.997	1
INPP5E	TMEM47	0.997	1
INPP5E	ZNHIT1	0.997	1
KCNK1	NEK8	0.997	1
KCNK1	OR10G3	0.997	1
KCNK1	PDLIM4	0.997	1
KCNK1	PRDX5	0.997	1
KCNK1	PRODH	0.997	1
KCNK1	SCYL1	0.997	1
KCNK1	SLC1A7	0.997	1
KCNK1	SPATA13	0.997	1
KDM5C	3p-Del	0.997	1
KDM5C	Amp_5q35.1	0.997	1
MET	PAM	0.997	1
MYF6	NF1	0.997	1
NDUFA3	NEK8	0.997	1
NDUFA3	OR10G3	0.997	1
NDUFA3	PDLIM4	0.997	1
NDUFA3	PRDX5	0.997	1
NDUFA3	PRODH	0.997	1
NDUFA3	SCYL1	0.997	1
NDUFA3	SLC1A7	0.997	1
NDUFA3	SPATA13	0.997	1
NEFH	NOM1	0.997	1
NEK8	NKX2-1	0.997	1
NEK8	ONECUT2	0.997	1
NEK8	RALB	0.997	1
NEK8	RCN1	0.997	1
NEK8	RIN1	0.997	1
NEK8	RNF113B	0.997	1
NEK8	RNF144A	0.997	1
NEK8	SLC14A1	0.997	1
NEK8	TMEM47	0.997	1
NEK8	ZNHIT1	0.997	1
NF2	6p-Del	0.997	1
NIPBL	RILPL1	0.997	1
NKX2-1	OR10G3	0.997	1
NKX2-1	PDLIM4	0.997	1
NKX2-1	PRDX5	0.997	1
NKX2-1	PRODH	0.997	1
NKX2-1	SCYL1	0.997	1
NKX2-1	SLC1A7	0.997	1
NKX2-1	SPATA13	0.997	1
ONECUT2	OR10G3	0.997	1
ONECUT2	PDLIM4	0.997	1
ONECUT2	PRDX5	0.997	1
ONECUT2	PRODH	0.997	1
ONECUT2	SCYL1	0.997	1
ONECUT2	SLC1A7	0.997	1
ONECUT2	SPATA13	0.997	1
OR10G3	RALB	0.997	1
OR10G3	RCN1	0.997	1
OR10G3	RIN1	0.997	1
OR10G3	RNF113B	0.997	1
OR10G3	RNF144A	0.997	1
OR10G3	SLC14A1	0.997	1
OR10G3	TMEM47	0.997	1
OR10G3	ZNHIT1	0.997	1
PAM	17p-Amp	0.997	1
PAM	2q-Amp	0.997	1
PAM	Amp_2q32.1	0.997	1
PARD6B	Del_11q23.1	0.997	1
PDLIM4	RALB	0.997	1
PDLIM4	RCN1	0.997	1
PDLIM4	RIN1	0.997	1
PDLIM4	RNF113B	0.997	1
PDLIM4	RNF144A	0.997	1
PDLIM4	SLC14A1	0.997	1
PDLIM4	TMEM47	0.997	1
PDLIM4	ZNHIT1	0.997	1
PIK3CA	Del_16q23.3	0.997	1
PRDX5	RALB	0.997	1
PRDX5	RCN1	0.997	1
PRDX5	RIN1	0.997	1
PRDX5	RNF113B	0.997	1
PRDX5	RNF144A	0.997	1
PRDX5	SLC14A1	0.997	1
PRDX5	TMEM47	0.997	1
PRDX5	ZNHIT1	0.997	1
PRODH	RALB	0.997	1
PRODH	RCN1	0.997	1
PRODH	RIN1	0.997	1
PRODH	RNF113B	0.997	1
PRODH	RNF144A	0.997	1
PRODH	SLC14A1	0.997	1
PRODH	TMEM47	0.997	1
PRODH	ZNHIT1	0.997	1
PTEN	17p-Del	0.997	1
PTEN	6p-Del	0.997	1
PTEN	Del_1p31.1	0.997	1
RAI1	3p-Amp	0.997	1
RALB	SCYL1	0.997	1
RALB	SLC1A7	0.997	1
RALB	SPATA13	0.997	1
RCN1	SCYL1	0.997	1
RCN1	SLC1A7	0.997	1
RCN1	SPATA13	0.997	1
RILPL1	ZNF814	0.997	1
RIN1	SCYL1	0.997	1
RIN1	SLC1A7	0.997	1
RIN1	SPATA13	0.997	1
RNF113B	SCYL1	0.997	1
RNF113B	SLC1A7	0.997	1
RNF113B	SPATA13	0.997	1
RNF144A	SCYL1	0.997	1
RNF144A	SLC1A7	0.997	1
RNF144A	SPATA13	0.997	1
SCYL1	SLC14A1	0.997	1
SCYL1	TMEM47	0.997	1
SCYL1	ZNHIT1	0.997	1
SLC14A1	SLC1A7	0.997	1
SLC14A1	SPATA13	0.997	1
SLC1A7	TMEM47	0.997	1
SLC1A7	ZNHIT1	0.997	1
SMARCA4	12p-Amp	0.997	1
SMARCB1	WASL	0.997	1
SPATA13	TMEM47	0.997	1
SPATA13	ZNHIT1	0.997	1
STXBP3	17q-Amp	0.997	1
SYNE1	Del_16q23.3	0.997	1
TP53	18q-Del	0.997	1
VCL	Amp_2q32.1	0.997	1
ZNF438	18q-Del	0.997	1
ZNF521	ZNF814	0.997	1
5p-Amp	Del_3p21.2	0.997	1
10q-Del	9p-Del	0.997	1
18q-Del	Del_16q23.3	0.997	1
3q-Del	9p-Del	0.997	1
3q-Del	Del_9p21.3	0.997	1
Del_1p36.31	Del_16q23.3	0.997	1
Del_4q34.3	Del_6q26	0.997	1
ACSF2	GPR50	0.998	1
ADCY8	KIAA0922	0.998	1
ADCY8	KRAS	0.998	1
ADCY8	MET	0.998	1
ADCY8	SLC23A1	0.998	1
ALMS1	CSK	0.998	1
ALMS1	PIK3CA	0.998	1
ALMS1	TCEB1	0.998	1
AR	PIK3CA	0.998	1
AR	ZNF814	0.998	1
AR	12q-Amp	0.998	1
AR	Amp_17q24.3	0.998	1
ARAP3	CUL3	0.998	1
ARHGAP33	NEFH	0.998	1
ARHGAP33	3p-Amp	0.998	1
BRAF	PCF11	0.998	1
CACNA1C	ENO1	0.998	1
CDK12	CSF1R	0.998	1
CSF1R	PARD6B	0.998	1
CSF1R	SYNE1	0.998	1
CSF1R	WDR52	0.998	1
CUL3	ENO1	0.998	1
DNMT3A	ZNF438	0.998	1
DPYSL4	3q-Del	0.998	1
ECHDC2	SMARCA4	0.998	1
EGFR	8p-Del	0.998	1
ENO1	PIK3CA	0.998	1
ENO1	Del_16q23.3	0.998	1
FAM178A	KIAA0922	0.998	1
FAT1	Del_9p21.3	0.998	1
FZR1	Del_9p23	0.998	1
GALNT7	NTRK3	0.998	1
GLS	16q-Amp	0.998	1
GLS	Del_11q23.1	0.998	1
GPR50	RAI1	0.998	1
GPR50	3p-Amp	0.998	1
INPP5E	SYNE1	0.998	1
KIAA0922	PCK1	0.998	1
KIF16B	14q-Del	0.998	1
KIF16B	Del_14q31.1	0.998	1
MET	PCK1	0.998	1
MET	Amp_7q31.2	0.998	1
NEK8	3q-Del	0.998	1
NF2	Del_11q23.1	0.998	1
NTRK3	SMARCB1	0.998	1
PDLIM4	3q-Del	0.998	1
PIK3CA	ZC3H3	0.998	1
PRDX5	3q-Del	0.998	1
PRKAG2	Del_9p23	0.998	1
PRODH	TP53	0.998	1
PRODH	Del_4q34.3	0.998	1
PTEN	10q-Del	0.998	1
PTEN	Del_10q23.31	0.998	1
RAI1	RIMBP3	0.998	1
SETD2	Del_3p26.3	0.998	1
SLC1A7	TP53	0.998	1
SLC1A7	Del_4q34.3	0.998	1
SLC6A14	STAG2	0.998	1
SLC6A14	Del_13q13.2	0.998	1
SMARCA4	12q-Amp	0.998	1
SMARCA4	17q-Amp	0.998	1
SMARCA4	3q-Amp	0.998	1
SPATA13	SYNE1	0.998	1
SPATA13	TP53	0.998	1
STXBP3	16q-Amp	0.998	1
STXBP3	17p-Amp	0.998	1
SYNE1	9p-Del	0.998	1
SYNE1	Del_4q34.3	0.998	1
TP53	18p-Del	0.998	1
VHL	Del_14q31.1	0.998	1
ZNF438	18p-Del	0.998	1
3p-Amp	21q-Del	0.998	1
5p-Amp	Amp_Xq11.2	0.998	1
5q-Amp	Amp_Xq11.2	0.998	1
13q-Del	14q-Del	0.998	1
14q-Del	18p-Del	0.998	1
17p-Del	18q-Del	0.998	1
17p-Del	Del_9p23	0.998	1
17p-Del	Del_9p21.3	0.998	1
1p-Del	9p-Del	0.998	1
21q-Del	Amp_2q32.1	0.998	1
3q-Del	Del_1p31.1	0.998	1
6q-Del	Del_3p14.1	0.998	1
8p-Del	Del_4q34.3	0.998	1
9p-Del	Del_2q22.1	0.998	1
9p-Del	Del_8p23.2	0.998	1
9q-Del	Del_10q23.31	0.998	1
Amp_5q35.1	Del_3p12.2	0.998	1
Del_2q37.3	Del_9p23	0.998	1
Del_2q37.3	Del_9p21.3	0.998	1
Del_2q37.3	Del_16q23.3	0.998	1
Del_3p14.1	Del_4q34.3	0.998	1
Del_8p23.2	Del_9p21.3	0.998	1
Del_11q23.1	Del_13q13.2	0.998	1
Del_11q23.1	Del_16q23.3	0.998	1
ALMS1	DNMT3A	0.999	1
AR	PCF11	0.999	1
AR	17q-Amp	0.999	1
ARAP3	GALNT7	0.999	1
ARAP3	Del_3p12.2	0.999	1
ARHGAP33	FAM178A	0.999	1
ARHGAP33	SMARCB1	0.999	1
ARHGAP33	WASL	0.999	1
ARHGAP35	SLC23A1	0.999	1
ARID1A	HSPA2	0.999	1
ATM	GALNT7	0.999	1
ATM	PDLIM4	0.999	1
ATM	PRODH	0.999	1
ATM	SLC1A7	0.999	1
BCLAF1	PIK3CA	0.999	1
BCLAF1	STXBP3	0.999	1
BRAF	WASL	0.999	1
C9orf171	FAT1	0.999	1
CDCA8	2q-Amp	0.999	1
CDCA8	Amp_2q32.1	0.999	1
CDKN2A	Del_9p23	0.999	1
CUL3	KIF16B	0.999	1
CUL3	PAM	0.999	1
CXorf23	RAI1	0.999	1
CYP2C18	F2RL1	0.999	1
CYP2C18	IFNB1	0.999	1
CYP2C18	KCNK1	0.999	1
CYP2C18	NDUFA3	0.999	1
CYP2C18	NKX2-1	0.999	1
CYP2C18	ONECUT2	0.999	1
CYP2C18	RALB	0.999	1
CYP2C18	RCN1	0.999	1
CYP2C18	RIN1	0.999	1
CYP2C18	RNF113B	0.999	1
CYP2C18	RNF144A	0.999	1
CYP2C18	SLC14A1	0.999	1
CYP2C18	TMEM47	0.999	1
CYP2C18	ZNHIT1	0.999	1
DNAJA3	NIPBL	0.999	1
DPYSL4	KDM5C	0.999	1
DPYSL4	Del_11q23.1	0.999	1
EDIL3	PTCH1	0.999	1
ENO1	GLS	0.999	1
ENO1	PARD6B	0.999	1
EPS15L1	RILPL1	0.999	1
EPS15L1	ZNF814	0.999	1
F2RL1	IFNB1	0.999	1
F2RL1	KCNK1	0.999	1
F2RL1	NDUFA3	0.999	1
F2RL1	NKX2-1	0.999	1
F2RL1	ONECUT2	0.999	1
F2RL1	RALB	0.999	1
F2RL1	RCN1	0.999	1
F2RL1	RIN1	0.999	1
F2RL1	RNF113B	0.999	1
F2RL1	RNF144A	0.999	1
F2RL1	SLC14A1	0.999	1
F2RL1	TMEM47	0.999	1
F2RL1	ZNHIT1	0.999	1
FAM178A	FAT1	0.999	1
FAT1	GLS	0.999	1
FGFR3	TXNIP	0.999	1
GLS	GPR50	0.999	1
GLS	ZNF438	0.999	1
GPR50	ZFYVE26	0.999	1
IFNB1	KCNK1	0.999	1
IFNB1	NDUFA3	0.999	1
IFNB1	NKX2-1	0.999	1
IFNB1	ONECUT2	0.999	1
IFNB1	RALB	0.999	1
IFNB1	RCN1	0.999	1
IFNB1	RIN1	0.999	1
IFNB1	RNF113B	0.999	1
IFNB1	RNF144A	0.999	1
IFNB1	SLC14A1	0.999	1
IFNB1	TMEM47	0.999	1
IFNB1	ZNHIT1	0.999	1
IMPA2	2q-Amp	0.999	1
IMPA2	Amp_2q32.1	0.999	1
KCNK1	NDUFA3	0.999	1
KCNK1	NKX2-1	0.999	1
KCNK1	ONECUT2	0.999	1
KCNK1	RALB	0.999	1
KCNK1	RCN1	0.999	1
KCNK1	RIN1	0.999	1
KCNK1	RNF113B	0.999	1
KCNK1	RNF144A	0.999	1
KCNK1	SLC14A1	0.999	1
KCNK1	TMEM47	0.999	1
KCNK1	ZNHIT1	0.999	1
KDM5C	PBRM1	0.999	1
KDM5C	PTEN	0.999	1
KDM5C	SPATA13	0.999	1
KDM5C	Del_3p21.2	0.999	1
KDM6A	NFE2L2	0.999	1
KIAA0922	NASP	0.999	1
KIAA0922	NTRK3	0.999	1
KIF16B	PIK3CA	0.999	1
KLK10	NEFH	0.999	1
KRAS	PRKAG2	0.999	1
MET	7p-Amp	0.999	1
MET	7q-Amp	0.999	1
MYF6	PRKAG2	0.999	1
MYF6	12p-Amp	0.999	1
NDUFA3	NKX2-1	0.999	1
NDUFA3	ONECUT2	0.999	1
NDUFA3	RALB	0.999	1
NDUFA3	RCN1	0.999	1
NDUFA3	RIN1	0.999	1
NDUFA3	RNF113B	0.999	1
NDUFA3	RNF144A	0.999	1
NDUFA3	SLC14A1	0.999	1
NDUFA3	TMEM47	0.999	1
NDUFA3	ZNHIT1	0.999	1
NIPBL	PCF11	0.999	1
NKX2-1	ONECUT2	0.999	1
NKX2-1	RALB	0.999	1
NKX2-1	RCN1	0.999	1
NKX2-1	RIN1	0.999	1
NKX2-1	RNF113B	0.999	1
NKX2-1	RNF144A	0.999	1
NKX2-1	SLC14A1	0.999	1
NKX2-1	TMEM47	0.999	1
NKX2-1	ZNHIT1	0.999	1
NTRK3	WASL	0.999	1
NUDT11	PTCH1	0.999	1
ONECUT2	RALB	0.999	1
ONECUT2	RCN1	0.999	1
ONECUT2	RIN1	0.999	1
ONECUT2	RNF113B	0.999	1
ONECUT2	RNF144A	0.999	1
ONECUT2	SLC14A1	0.999	1
ONECUT2	TMEM47	0.999	1
ONECUT2	ZNHIT1	0.999	1
PAM	12p-Amp	0.999	1
PAM	12q-Amp	0.999	1
PAM	Amp_3q26.32	0.999	1
PCF11	ZNF532	0.999	1
PODXL	Del_11q23.1	0.999	1
PRDX5	SMARCA4	0.999	1
PRKAG2	9p-Del	0.999	1
PTEN	1p-Del	0.999	1
PTEN	Del_1q44	0.999	1
PTEN	Del_2q37.3	0.999	1
PTEN	Del_16q23.3	0.999	1
RAI1	TCEB1	0.999	1
RALB	RCN1	0.999	1
RALB	RIN1	0.999	1
RALB	RNF113B	0.999	1
RALB	RNF144A	0.999	1
RALB	SLC14A1	0.999	1
RALB	TMEM47	0.999	1
RALB	ZNHIT1	0.999	1
RCN1	RIN1	0.999	1
RCN1	RNF113B	0.999	1
RCN1	RNF144A	0.999	1
RCN1	SLC14A1	0.999	1
RCN1	TMEM47	0.999	1
RCN1	ZNHIT1	0.999	1
RIN1	RNF113B	0.999	1
RIN1	RNF144A	0.999	1
RIN1	SLC14A1	0.999	1
RIN1	TMEM47	0.999	1
RIN1	ZNHIT1	0.999	1
RNF113B	RNF144A	0.999	1
RNF113B	SLC14A1	0.999	1
RNF113B	TMEM47	0.999	1
RNF144A	SLC14A1	0.999	1
RNF144A	TMEM47	0.999	1
RNF144A	ZNHIT1	0.999	1
SLC14A1	TMEM47	0.999	1
SLC14A1	ZNHIT1	0.999	1
SLC6A14	WASL	0.999	1
SLC6A14	13q-Del	0.999	1
SMARCA4	16p-Amp	0.999	1
SMARCA4	16q-Amp	0.999	1
SMARCA4	17p-Amp	0.999	1
SMARCB1	Del_16q23.3	0.999	1
STXBP3	12p-Amp	0.999	1
SYNE1	TP53	0.999	1
TMEM47	ZNHIT1	0.999	1
TP53	Del_4q34.3	0.999	1
TXNIP	ZNF521	0.999	1
VCL	ZNF814	0.999	1
ZNF814	Del_11q23.1	0.999	1
2q-Amp	21q-Del	0.999	1
5p-Amp	Del_3p26.3	0.999	1
5q-Amp	Del_3p26.3	0.999	1
5q-Amp	Del_8p23.2	0.999	1
10q-Del	9q-Del	0.999	1
13q-Del	Del_9p21.3	0.999	1
13q-Del	Del_14q31.1	0.999	1
14q-Del	Del_13q13.2	0.999	1
17p-Del	18p-Del	0.999	1
17p-Del	9p-Del	0.999	1
17p-Del	Del_11q23.1	0.999	1
18p-Del	21q-Del	0.999	1
18p-Del	Del_1q44	0.999	1
18q-Del	Del_10q23.31	0.999	1
18q-Del	Del_14q31.1	0.999	1
21q-Del	Del_4q34.3	0.999	1
21q-Del	Del_16q23.3	0.999	1
6q-Del	Del_8p23.2	0.999	1
8p-Del	Del_2q37.3	0.999	1
9p-Del	Del_1q44	0.999	1
9p-Del	Del_2q37.3	0.999	1
9q-Del	Del_2q22.1	0.999	1
9q-Del	Del_16q23.3	0.999	1
Amp_5q35.1	Del_8p23.2	0.999	1
Del_1q44	Del_8p23.2	0.999	1
Del_1q44	Del_9p23	0.999	1
Del_2q37.3	Del_8p23.2	0.999	1
Del_2q37.3	Del_11q23.1	0.999	1
Del_3p12.2	Del_4q34.3	0.999	1
Del_8p23.2	Del_10q23.31	0.999	1
Del_13q13.2	Del_14q31.1	0.999	1
ACSF2	IFNB1	1	1
ACSF2	INPP5E	1	1
ACSF2	PDLIM4	1	1
ADCY8	ECHDC2	1	1
ADCY8	NEK8	1	1
ADCY8	OR10G3	1	1
ALMS1	OR10G3	1	1
AR	17p-Amp	1	1
ARAP3	RIN1	1	1
ARAP3	Del_4q34.3	1	1
ARHGAP33	ATM	1	1
ARHGAP33	GALNT7	1	1
ARHGAP33	NASP	1	1
ARHGAP33	NTRK3	1	1
ARHGAP33	PRODH	1	1
ARHGAP33	SLC1A7	1	1
ARID1A	NDUFA3	1	1
ATM	ONECUT2	1	1
BCLAF1	SPATA13	1	1
C16orf78	DNMT3A	1	1
C16orf78	PBRM1	1	1
C16orf78	Amp_5q35.1	1	1
C16orf78	Del_3p21.2	1	1
C16orf78	Del_3p14.1	1	1
C16orf78	Del_3p12.2	1	1
C9orf171	RNF113B	1	1
C9orf171	ZC3H3	1	1
C9orf171	ZNHIT1	1	1
CACNA1C	DPYSL4	1	1
CACNA1C	SPATA13	1	1
CACNA1C	SYNE1	1	1
CARKD	CDK12	1	1
CARKD	KRAS	1	1
CARKD	MYF6	1	1
CARKD	14q-Del	1	1
CARKD	Del_14q31.1	1	1
CDCA8	CUL3	1	1
CDCA8	NF1	1	1
CDCA8	NOM1	1	1
CDKN2A	SLC6A14	1	1
CSF1R	CXorf23	1	1
CSF1R	ENO1	1	1
CSF1R	F2RL1	1	1
CSF1R	HSPA2	1	1
CSF1R	PIK3CA	1	1
CSF1R	SCYL1	1	1
CSF1R	SLC1A7	1	1
CSK	ECHDC2	1	1
CXorf23	EGFR	1	1
CXorf23	ENO1	1	1
CYP2C18	EDIL3	1	1
CYP2C18	NF1	1	1
CYP2C18	16p-Amp	1	1
CYP2C18	16q-Amp	1	1
CYP2C18	17p-Amp	1	1
CYP2C18	17q-Amp	1	1
CYP2C18	20p-Amp	1	1
CYP2C18	20q-Amp	1	1
CYP2C18	3p-Amp	1	1
CYP2C18	3q-Amp	1	1
CYP2C18	7p-Amp	1	1
CYP2C18	7q-Amp	1	1
CYP2C18	21q-Del	1	1
CYP2C18	Amp_3q26.32	1	1
CYP2C18	Amp_7q31.2	1	1
CYP2C18	Amp_17q24.3	1	1
DNAJA3	KRAS	1	1
DNAJA3	PODXL	1	1
DNMT3A	F2RL1	1	1
DNMT3A	OR10G3	1	1
DNMT3A	SCYL1	1	1
DNMT3A	SLC1A7	1	1
DPYSL4	ENO1	1	1
DPYSL4	PARD6B	1	1
DPYSL4	SPATA13	1	1
DPYSL4	SYNE1	1	1
DPYSL4	18p-Del	1	1
DPYSL4	18q-Del	1	1
DPYSL4	Del_3p21.2	1	1
ECHDC2	NEK8	1	1
ECHDC2	RIMBP3	1	1
ECHDC2	SLC23A1	1	1
EDIL3	NTRK3	1	1
EDIL3	ZNF438	1	1
EGFR	FAT1	1	1
ENO1	GPR50	1	1
ENO1	SPATA13	1	1
ENO1	SYNE1	1	1
EPS15L1	NFE2L2	1	1
EPS15L1	Del_11q23.1	1	1
F2RL1	PIK3CA	1	1
F2RL1	SCYL1	1	1
F2RL1	SLC1A7	1	1
FAM178A	INPP5E	1	1
FAM178A	NKX2-1	1	1
FAM178A	PDLIM4	1	1
FAT1	NF2	1	1
FGFR3	KDM6A	1	1
FGFR3	STAG2	1	1
FZR1	KCNK1	1	1
FZR1	MYF6	1	1
FZR1	PODXL	1	1
FZR1	PRKAG2	1	1
FZR1	Amp_Xq11.2	1	1
GALNT7	NF1	1	1
GALNT7	NIPBL	1	1
GALNT7	PRODH	1	1
GALNT7	SLC1A7	1	1
GALNT7	VCL	1	1
GPR50	SLC14A1	1	1
HSPA2	PTCH1	1	1
IFNB1	5p-Amp	1	1
IFNB1	5q-Amp	1	1
IFNB1	13q-Del	1	1
IFNB1	14q-Del	1	1
IFNB1	8p-Del	1	1
IFNB1	Amp_5q35.1	1	1
IFNB1	Del_3p26.3	1	1
IFNB1	Del_3p21.2	1	1
IFNB1	Del_8p23.2	1	1
IFNB1	Del_13q13.2	1	1
IFNB1	Del_14q31.1	1	1
IMPA2	PIK3CA	1	1
IMPA2	5p-Amp	1	1
IMPA2	5q-Amp	1	1
IMPA2	Amp_5q35.1	1	1
INPP5E	KIAA0922	1	1
INPP5E	PCK1	1	1
INPP5E	PDLIM4	1	1
INPP5E	16p-Amp	1	1
INPP5E	16q-Amp	1	1
KCNK1	PRKAG2	1	1
KCNK1	SYNE1	1	1
KCNK1	3p-Del	1	1
KCNK1	6q-Del	1	1
KCNK1	9p-Del	1	1
KCNK1	9q-Del	1	1
KCNK1	Del_3p26.3	1	1
KCNK1	Del_3p21.2	1	1
KCNK1	Del_3p14.1	1	1
KCNK1	Del_3p12.2	1	1
KCNK1	Del_6q26	1	1
KCNK1	Del_9p23	1	1
KCNK1	Del_9p21.3	1	1
KDM5C	Del_3p26.3	1	1
KDM6A	PARD6B	1	1
KIAA0922	PDLIM4	1	1
KIF16B	WDR52	1	1
KLK10	ZFYVE26	1	1
KRAS	MYF6	1	1
MET	17p-Amp	1	1
MET	17q-Amp	1	1
MET	Amp_17q24.3	1	1
MTOR	NDUFA3	1	1
MYF6	RIMBP3	1	1
MYF6	ZC3H3	1	1
MYF6	12q-Amp	1	1
MYF6	Amp_Xq11.2	1	1
NDUFA3	SYNE1	1	1
NDUFA3	7q-Amp	1	1
NDUFA3	18p-Del	1	1
NDUFA3	18q-Del	1	1
NDUFA3	3p-Del	1	1
NDUFA3	9p-Del	1	1
NDUFA3	9q-Del	1	1
NDUFA3	Amp_7q31.2	1	1
NDUFA3	Del_1p36.31	1	1
NDUFA3	Del_3p26.3	1	1
NDUFA3	Del_3p21.2	1	1
NDUFA3	Del_3p14.1	1	1
NDUFA3	Del_9p23	1	1
NDUFA3	Del_9p21.3	1	1
NDUFA3	Del_13q13.2	1	1
NEK8	SLC23A1	1	1
NEK8	SMARCA4	1	1
NEK8	7p-Amp	1	1
NEK8	7q-Amp	1	1
NEK8	Amp_7q31.2	1	1
NF1	PARD6B	1	1
NF1	PRODH	1	1
NF1	RALB	1	1
NF1	SLC1A7	1	1
NIPBL	PRODH	1	1
NIPBL	SLC1A7	1	1
NKX2-1	16p-Amp	1	1
NKX2-1	16q-Amp	1	1
NKX2-1	17p-Amp	1	1
NKX2-1	17q-Amp	1	1
NKX2-1	20p-Amp	1	1
NKX2-1	20q-Amp	1	1
NKX2-1	2q-Amp	1	1
NKX2-1	3p-Amp	1	1
NKX2-1	3q-Amp	1	1
NKX2-1	7p-Amp	1	1
NKX2-1	7q-Amp	1	1
NKX2-1	Amp_2q32.1	1	1
NKX2-1	Amp_3q26.32	1	1
NKX2-1	Amp_7q31.2	1	1
NKX2-1	Amp_17q24.3	1	1
NTRK3	PRODH	1	1
NTRK3	SLC1A7	1	1
ONECUT2	5p-Amp	1	1
ONECUT2	5q-Amp	1	1
ONECUT2	3p-Del	1	1
ONECUT2	3q-Del	1	1
ONECUT2	Amp_5q35.1	1	1
ONECUT2	Del_3p26.3	1	1
ONECUT2	Del_3p21.2	1	1
ONECUT2	Del_3p14.1	1	1
ONECUT2	Del_3p12.2	1	1
OR10G3	PBRM1	1	1
OR10G3	VHL	1	1
PAM	16p-Amp	1	1
PAM	16q-Amp	1	1
PAM	3q-Amp	1	1
PARD6B	SYNE1	1	1
PBRM1	RNF144A	1	1
PBRM1	SETD2	1	1
PBRM1	VHL	1	1
PBRM1	3p-Del	1	1
PBRM1	Del_3p26.3	1	1
PBRM1	Del_3p21.2	1	1
PBRM1	Del_3p14.1	1	1
PBRM1	Del_3p12.2	1	1
PCK1	PDLIM4	1	1
PIK3CA	SCYL1	1	1
PIK3CA	SLC1A7	1	1
PIK3CA	SPATA13	1	1
PRKAG2	SCYL1	1	1
PRKAG2	Del_9p21.3	1	1
PRODH	SLC1A7	1	1
PRODH	SMARCB1	1	1
PRODH	WASL	1	1
PRODH	Del_16q23.3	1	1
PTEN	RALB	1	1
PTEN	Del_2q22.1	1	1
RALB	8p-Del	1	1
RALB	Del_3p26.3	1	1
RALB	Del_3p21.2	1	1
RALB	Del_8p23.2	1	1
RCN1	7p-Amp	1	1
RCN1	7q-Amp	1	1
RCN1	10q-Del	1	1
RCN1	1p-Del	1	1
RCN1	21q-Del	1	1
RCN1	9p-Del	1	1
RCN1	9q-Del	1	1
RCN1	Amp_7q31.2	1	1
RCN1	Del_1p36.31	1	1
RCN1	Del_1p31.1	1	1
RCN1	Del_1q44	1	1
RCN1	Del_9p23	1	1
RCN1	Del_9p21.3	1	1
RCN1	Del_10q23.31	1	1
RIMBP3	ZC3H3	1	1
RIMBP3	10q-Del	1	1
RIMBP3	Del_10q23.31	1	1
RIN1	3p-Del	1	1
RIN1	8p-Del	1	1
RIN1	Del_2q37.3	1	1
RIN1	Del_3p26.3	1	1
RIN1	Del_3p21.2	1	1
RIN1	Del_3p14.1	1	1
RIN1	Del_3p12.2	1	1
RIN1	Del_4q34.3	1	1
RIN1	Del_8p23.2	1	1
RNF113B	ZNHIT1	1	1
RNF144A	SETD2	1	1
RNF144A	VHL	1	1
RNF144A	10q-Del	1	1
RNF144A	14q-Del	1	1
RNF144A	Del_3p26.3	1	1
RNF144A	Del_3p21.2	1	1
RNF144A	Del_10q23.31	1	1
RNF144A	Del_14q31.1	1	1
SCYL1	SLC1A7	1	1
SETD2	WDR52	1	1
SETD2	Del_3p21.2	1	1
SLC14A1	12p-Amp	1	1
SLC14A1	12q-Amp	1	1
SLC14A1	16p-Amp	1	1
SLC14A1	16q-Amp	1	1
SLC14A1	17p-Amp	1	1
SLC14A1	17q-Amp	1	1
SLC14A1	20p-Amp	1	1
SLC14A1	20q-Amp	1	1
SLC14A1	2q-Amp	1	1
SLC14A1	3p-Amp	1	1
SLC14A1	3q-Amp	1	1
SLC14A1	7p-Amp	1	1
SLC14A1	7q-Amp	1	1
SLC14A1	21q-Del	1	1
SLC14A1	Amp_2q32.1	1	1
SLC14A1	Amp_3q26.32	1	1
SLC14A1	Amp_7q31.2	1	1
SLC14A1	Amp_17q24.3	1	1
SLC1A7	SMARCB1	1	1
SLC1A7	WASL	1	1
SLC1A7	Del_16q23.3	1	1
SLC23A1	SMARCA4	1	1
SLC23A1	ZNF438	1	1
SLC23A1	ZNF521	1	1
SLC23A1	ZNF532	1	1
SMARCA4	7p-Amp	1	1
SMARCA4	7q-Amp	1	1
SMARCA4	Amp_3q26.32	1	1
SMARCA4	Amp_7q31.2	1	1
SPATA13	Del_16q23.3	1	1
STAG2	WASL	1	1
STXBP3	12q-Amp	1	1
STXBP3	16p-Amp	1	1
STXBP3	3p-Amp	1	1
STXBP3	3q-Amp	1	1
STXBP3	7p-Amp	1	1
STXBP3	7q-Amp	1	1
STXBP3	Amp_3q26.32	1	1
STXBP3	Amp_7q31.2	1	1
SYNE1	9q-Del	1	1
TMEM47	3p-Del	1	1
TMEM47	3q-Del	1	1
TMEM47	Del_3p26.3	1	1
TMEM47	Del_3p21.2	1	1
TMEM47	Del_3p14.1	1	1
TP53	10q-Del	1	1
TP53	13q-Del	1	1
TP53	17p-Del	1	1
TP53	1p-Del	1	1
TP53	21q-Del	1	1
TP53	6p-Del	1	1
TP53	6q-Del	1	1
TP53	Del_1p36.31	1	1
TP53	Del_1p31.1	1	1
TP53	Del_1q44	1	1
TP53	Del_2q22.1	1	1
TP53	Del_2q37.3	1	1
TP53	Del_6q26	1	1
TP53	Del_10q23.31	1	1
TP53	Del_13q13.2	1	1
TP53	Del_16q23.3	1	1
VHL	3p-Del	1	1
VHL	Amp_5q35.1	1	1
VHL	Del_3p26.3	1	1
VHL	Del_3p21.2	1	1
VHL	Del_3p14.1	1	1
VHL	Del_3p12.2	1	1
ZNF438	7p-Amp	1	1
ZNF438	7q-Amp	1	1
ZNF438	Amp_7q31.2	1	1
ZNF521	ZNF532	1	1
12p-Amp	12q-Amp	1	1
12p-Amp	16p-Amp	1	1
12p-Amp	16q-Amp	1	1
12p-Amp	17p-Amp	1	1
12p-Amp	17q-Amp	1	1
12p-Amp	20p-Amp	1	1
12p-Amp	20q-Amp	1	1
12p-Amp	2q-Amp	1	1
12p-Amp	3p-Amp	1	1
12p-Amp	3q-Amp	1	1
12p-Amp	7p-Amp	1	1
12p-Amp	7q-Amp	1	1
12p-Amp	21q-Del	1	1
12p-Amp	Amp_2q32.1	1	1
12p-Amp	Amp_3q26.32	1	1
12p-Amp	Amp_7q31.2	1	1
12p-Amp	Amp_17q24.3	1	1
12q-Amp	16p-Amp	1	1
12q-Amp	16q-Amp	1	1
12q-Amp	17p-Amp	1	1
12q-Amp	17q-Amp	1	1
12q-Amp	20p-Amp	1	1
12q-Amp	20q-Amp	1	1
12q-Amp	2q-Amp	1	1
12q-Amp	3p-Amp	1	1
12q-Amp	3q-Amp	1	1
12q-Amp	7p-Amp	1	1
12q-Amp	7q-Amp	1	1
12q-Amp	21q-Del	1	1
12q-Amp	Amp_2q32.1	1	1
12q-Amp	Amp_3q26.32	1	1
12q-Amp	Amp_7q31.2	1	1
12q-Amp	Amp_17q24.3	1	1
16p-Amp	16q-Amp	1	1
16p-Amp	17p-Amp	1	1
16p-Amp	17q-Amp	1	1
16p-Amp	20p-Amp	1	1
16p-Amp	20q-Amp	1	1
16p-Amp	2q-Amp	1	1
16p-Amp	3p-Amp	1	1
16p-Amp	3q-Amp	1	1
16p-Amp	7p-Amp	1	1
16p-Amp	7q-Amp	1	1
16p-Amp	Amp_2q32.1	1	1
16p-Amp	Amp_3q26.32	1	1
16p-Amp	Amp_7q31.2	1	1
16p-Amp	Amp_17q24.3	1	1
16q-Amp	17p-Amp	1	1
16q-Amp	17q-Amp	1	1
16q-Amp	20p-Amp	1	1
16q-Amp	20q-Amp	1	1
16q-Amp	2q-Amp	1	1
16q-Amp	3p-Amp	1	1
16q-Amp	3q-Amp	1	1
16q-Amp	7p-Amp	1	1
16q-Amp	7q-Amp	1	1
16q-Amp	Amp_2q32.1	1	1
16q-Amp	Amp_3q26.32	1	1
16q-Amp	Amp_7q31.2	1	1
16q-Amp	Amp_17q24.3	1	1
17p-Amp	17q-Amp	1	1
17p-Amp	20p-Amp	1	1
17p-Amp	20q-Amp	1	1
17p-Amp	2q-Amp	1	1
17p-Amp	3p-Amp	1	1
17p-Amp	3q-Amp	1	1
17p-Amp	7p-Amp	1	1
17p-Amp	7q-Amp	1	1
17p-Amp	Amp_2q32.1	1	1
17p-Amp	Amp_3q26.32	1	1
17p-Amp	Amp_7q31.2	1	1
17p-Amp	Amp_17q24.3	1	1
17q-Amp	20p-Amp	1	1
17q-Amp	20q-Amp	1	1
17q-Amp	2q-Amp	1	1
17q-Amp	3p-Amp	1	1
17q-Amp	3q-Amp	1	1
17q-Amp	7p-Amp	1	1
17q-Amp	7q-Amp	1	1
17q-Amp	Amp_2q32.1	1	1
17q-Amp	Amp_3q26.32	1	1
17q-Amp	Amp_7q31.2	1	1
17q-Amp	Amp_17q24.3	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	2q-Amp	1	1
20p-Amp	3p-Amp	1	1
20p-Amp	3q-Amp	1	1
20p-Amp	7p-Amp	1	1
20p-Amp	7q-Amp	1	1
20p-Amp	Amp_2q32.1	1	1
20p-Amp	Amp_3q26.32	1	1
20p-Amp	Amp_7q31.2	1	1
20p-Amp	Amp_17q24.3	1	1
20q-Amp	2q-Amp	1	1
20q-Amp	3p-Amp	1	1
20q-Amp	3q-Amp	1	1
20q-Amp	7p-Amp	1	1
20q-Amp	7q-Amp	1	1
20q-Amp	Amp_2q32.1	1	1
20q-Amp	Amp_3q26.32	1	1
20q-Amp	Amp_7q31.2	1	1
20q-Amp	Amp_17q24.3	1	1
2q-Amp	3p-Amp	1	1
2q-Amp	3q-Amp	1	1
2q-Amp	7p-Amp	1	1
2q-Amp	7q-Amp	1	1
2q-Amp	Amp_2q32.1	1	1
2q-Amp	Amp_3q26.32	1	1
2q-Amp	Amp_7q31.2	1	1
2q-Amp	Amp_17q24.3	1	1
3p-Amp	3q-Amp	1	1
3p-Amp	7p-Amp	1	1
3p-Amp	7q-Amp	1	1
3p-Amp	Amp_2q32.1	1	1
3p-Amp	Amp_3q26.32	1	1
3p-Amp	Amp_7q31.2	1	1
3p-Amp	Amp_17q24.3	1	1
3q-Amp	7p-Amp	1	1
3q-Amp	7q-Amp	1	1
3q-Amp	Amp_2q32.1	1	1
3q-Amp	Amp_3q26.32	1	1
3q-Amp	Amp_7q31.2	1	1
3q-Amp	Amp_17q24.3	1	1
5p-Amp	5q-Amp	1	1
5p-Amp	Amp_5q35.1	1	1
5p-Amp	Del_8p23.2	1	1
5q-Amp	Amp_5q35.1	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_2q32.1	1	1
7p-Amp	Amp_3q26.32	1	1
7p-Amp	Amp_7q31.2	1	1
7p-Amp	Amp_17q24.3	1	1
7q-Amp	Amp_2q32.1	1	1
7q-Amp	Amp_3q26.32	1	1
7q-Amp	Amp_7q31.2	1	1
7q-Amp	Amp_17q24.3	1	1
10q-Del	13q-Del	1	1
10q-Del	17p-Del	1	1
10q-Del	1p-Del	1	1
10q-Del	21q-Del	1	1
10q-Del	3q-Del	1	1
10q-Del	6p-Del	1	1
10q-Del	6q-Del	1	1
10q-Del	8p-Del	1	1
10q-Del	Del_1p36.31	1	1
10q-Del	Del_1p31.1	1	1
10q-Del	Del_1q44	1	1
10q-Del	Del_2q22.1	1	1
10q-Del	Del_2q37.3	1	1
10q-Del	Del_6q26	1	1
10q-Del	Del_8p23.2	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_11q23.1	1	1
10q-Del	Del_13q13.2	1	1
10q-Del	Del_16q23.3	1	1
13q-Del	17p-Del	1	1
13q-Del	18p-Del	1	1
13q-Del	18q-Del	1	1
13q-Del	1p-Del	1	1
13q-Del	21q-Del	1	1
13q-Del	6p-Del	1	1
13q-Del	6q-Del	1	1
13q-Del	8p-Del	1	1
13q-Del	9p-Del	1	1
13q-Del	9q-Del	1	1
13q-Del	Del_1p36.31	1	1
13q-Del	Del_1p31.1	1	1
13q-Del	Del_1q44	1	1
13q-Del	Del_2q22.1	1	1
13q-Del	Del_2q37.3	1	1
13q-Del	Del_4q34.3	1	1
13q-Del	Del_6q26	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_9p23	1	1
13q-Del	Del_10q23.31	1	1
13q-Del	Del_13q13.2	1	1
13q-Del	Del_16q23.3	1	1
14q-Del	18q-Del	1	1
14q-Del	1p-Del	1	1
14q-Del	3p-Del	1	1
14q-Del	8p-Del	1	1
14q-Del	9p-Del	1	1
14q-Del	9q-Del	1	1
14q-Del	Del_1p36.31	1	1
14q-Del	Del_1p31.1	1	1
14q-Del	Del_3p26.3	1	1
14q-Del	Del_3p21.2	1	1
14q-Del	Del_3p14.1	1	1
14q-Del	Del_3p12.2	1	1
14q-Del	Del_4q34.3	1	1
14q-Del	Del_8p23.2	1	1
14q-Del	Del_9p23	1	1
14q-Del	Del_9p21.3	1	1
14q-Del	Del_14q31.1	1	1
17p-Del	1p-Del	1	1
17p-Del	21q-Del	1	1
17p-Del	6p-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	9q-Del	1	1
17p-Del	Del_1p36.31	1	1
17p-Del	Del_1p31.1	1	1
17p-Del	Del_1q44	1	1
17p-Del	Del_2q22.1	1	1
17p-Del	Del_2q37.3	1	1
17p-Del	Del_6q26	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_13q13.2	1	1
17p-Del	Del_16q23.3	1	1
18p-Del	18q-Del	1	1
18p-Del	1p-Del	1	1
18p-Del	6p-Del	1	1
18p-Del	6q-Del	1	1
18p-Del	9p-Del	1	1
18p-Del	9q-Del	1	1
18p-Del	Del_1p36.31	1	1
18p-Del	Del_1p31.1	1	1
18p-Del	Del_2q37.3	1	1
18p-Del	Del_4q34.3	1	1
18p-Del	Del_6q26	1	1
18p-Del	Del_9p23	1	1
18p-Del	Del_9p21.3	1	1
18p-Del	Del_11q23.1	1	1
18p-Del	Del_13q13.2	1	1
18q-Del	1p-Del	1	1
18q-Del	6p-Del	1	1
18q-Del	6q-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	9q-Del	1	1
18q-Del	Del_1p36.31	1	1
18q-Del	Del_1p31.1	1	1
18q-Del	Del_2q37.3	1	1
18q-Del	Del_4q34.3	1	1
18q-Del	Del_6q26	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_9p21.3	1	1
18q-Del	Del_11q23.1	1	1
18q-Del	Del_13q13.2	1	1
1p-Del	21q-Del	1	1
1p-Del	6p-Del	1	1
1p-Del	6q-Del	1	1
1p-Del	8p-Del	1	1
1p-Del	9q-Del	1	1
1p-Del	Del_1p36.31	1	1
1p-Del	Del_1p31.1	1	1
1p-Del	Del_1q44	1	1
1p-Del	Del_2q22.1	1	1
1p-Del	Del_2q37.3	1	1
1p-Del	Del_4q34.3	1	1
1p-Del	Del_6q26	1	1
1p-Del	Del_8p23.2	1	1
1p-Del	Del_10q23.31	1	1
1p-Del	Del_11q23.1	1	1
1p-Del	Del_13q13.2	1	1
1p-Del	Del_14q31.1	1	1
21q-Del	6p-Del	1	1
21q-Del	6q-Del	1	1
21q-Del	9q-Del	1	1
21q-Del	Del_1p36.31	1	1
21q-Del	Del_1p31.1	1	1
21q-Del	Del_1q44	1	1
21q-Del	Del_2q22.1	1	1
21q-Del	Del_2q37.3	1	1
21q-Del	Del_6q26	1	1
21q-Del	Del_10q23.31	1	1
21q-Del	Del_11q23.1	1	1
21q-Del	Del_13q13.2	1	1
3p-Del	3q-Del	1	1
3p-Del	8p-Del	1	1
3p-Del	9p-Del	1	1
3p-Del	9q-Del	1	1
3p-Del	Amp_5q35.1	1	1
3p-Del	Del_3p26.3	1	1
3p-Del	Del_3p21.2	1	1
3p-Del	Del_3p14.1	1	1
3p-Del	Del_3p12.2	1	1
3p-Del	Del_6q26	1	1
3p-Del	Del_8p23.2	1	1
3p-Del	Del_9p23	1	1
3p-Del	Del_9p21.3	1	1
3p-Del	Del_14q31.1	1	1
3q-Del	6p-Del	1	1
3q-Del	6q-Del	1	1
3q-Del	Del_3p26.3	1	1
3q-Del	Del_3p21.2	1	1
3q-Del	Del_3p14.1	1	1
3q-Del	Del_3p12.2	1	1
3q-Del	Del_6q26	1	1
3q-Del	Del_10q23.31	1	1
6p-Del	6q-Del	1	1
6p-Del	8p-Del	1	1
6p-Del	9p-Del	1	1
6p-Del	9q-Del	1	1
6p-Del	Del_1p36.31	1	1
6p-Del	Del_1p31.1	1	1
6p-Del	Del_1q44	1	1
6p-Del	Del_2q22.1	1	1
6p-Del	Del_2q37.3	1	1
6p-Del	Del_4q34.3	1	1
6p-Del	Del_6q26	1	1
6p-Del	Del_8p23.2	1	1
6p-Del	Del_9p23	1	1
6p-Del	Del_9p21.3	1	1
6p-Del	Del_10q23.31	1	1
6p-Del	Del_11q23.1	1	1
6p-Del	Del_13q13.2	1	1
6p-Del	Del_16q23.3	1	1
6q-Del	8p-Del	1	1
6q-Del	9p-Del	1	1
6q-Del	9q-Del	1	1
6q-Del	Del_1p36.31	1	1
6q-Del	Del_1p31.1	1	1
6q-Del	Del_1q44	1	1
6q-Del	Del_2q22.1	1	1
6q-Del	Del_2q37.3	1	1
6q-Del	Del_3p12.2	1	1
6q-Del	Del_6q26	1	1
6q-Del	Del_9p23	1	1
6q-Del	Del_9p21.3	1	1
6q-Del	Del_10q23.31	1	1
6q-Del	Del_11q23.1	1	1
6q-Del	Del_13q13.2	1	1
6q-Del	Del_16q23.3	1	1
8p-Del	Del_1p36.31	1	1
8p-Del	Del_1p31.1	1	1
8p-Del	Del_1q44	1	1
8p-Del	Del_2q22.1	1	1
8p-Del	Del_3p26.3	1	1
8p-Del	Del_3p21.2	1	1
8p-Del	Del_3p14.1	1	1
8p-Del	Del_3p12.2	1	1
8p-Del	Del_6q26	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_13q13.2	1	1
8p-Del	Del_14q31.1	1	1
9p-Del	9q-Del	1	1
9p-Del	Del_1p36.31	1	1
9p-Del	Del_1p31.1	1	1
9p-Del	Del_3p26.3	1	1
9p-Del	Del_3p21.2	1	1
9p-Del	Del_3p14.1	1	1
9p-Del	Del_3p12.2	1	1
9p-Del	Del_4q34.3	1	1
9p-Del	Del_6q26	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_11q23.1	1	1
9p-Del	Del_13q13.2	1	1
9p-Del	Del_14q31.1	1	1
9q-Del	Del_1p36.31	1	1
9q-Del	Del_1p31.1	1	1
9q-Del	Del_1q44	1	1
9q-Del	Del_2q37.3	1	1
9q-Del	Del_3p26.3	1	1
9q-Del	Del_3p21.2	1	1
9q-Del	Del_3p14.1	1	1
9q-Del	Del_3p12.2	1	1
9q-Del	Del_4q34.3	1	1
9q-Del	Del_6q26	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_11q23.1	1	1
9q-Del	Del_13q13.2	1	1
9q-Del	Del_14q31.1	1	1
Amp_2q32.1	Amp_3q26.32	1	1
Amp_2q32.1	Amp_7q31.2	1	1
Amp_2q32.1	Amp_17q24.3	1	1
Amp_3q26.32	Amp_7q31.2	1	1
Amp_3q26.32	Amp_17q24.3	1	1
Amp_5q35.1	Del_3p26.3	1	1
Amp_5q35.1	Del_3p21.2	1	1
Amp_5q35.1	Del_3p14.1	1	1
Amp_7q31.2	Amp_17q24.3	1	1
Del_1p36.31	Del_1p31.1	1	1
Del_1p36.31	Del_1q44	1	1
Del_1p36.31	Del_2q22.1	1	1
Del_1p36.31	Del_2q37.3	1	1
Del_1p36.31	Del_4q34.3	1	1
Del_1p36.31	Del_6q26	1	1
Del_1p36.31	Del_8p23.2	1	1
Del_1p36.31	Del_9p23	1	1
Del_1p36.31	Del_9p21.3	1	1
Del_1p36.31	Del_10q23.31	1	1
Del_1p36.31	Del_11q23.1	1	1
Del_1p36.31	Del_13q13.2	1	1
Del_1p36.31	Del_14q31.1	1	1
Del_1p31.1	Del_1q44	1	1
Del_1p31.1	Del_2q22.1	1	1
Del_1p31.1	Del_2q37.3	1	1
Del_1p31.1	Del_4q34.3	1	1
Del_1p31.1	Del_6q26	1	1
Del_1p31.1	Del_8p23.2	1	1
Del_1p31.1	Del_9p23	1	1
Del_1p31.1	Del_9p21.3	1	1
Del_1p31.1	Del_10q23.31	1	1
Del_1p31.1	Del_11q23.1	1	1
Del_1p31.1	Del_13q13.2	1	1
Del_1p31.1	Del_14q31.1	1	1
Del_1q44	Del_2q22.1	1	1
Del_1q44	Del_2q37.3	1	1
Del_1q44	Del_6q26	1	1
Del_1q44	Del_10q23.31	1	1
Del_1q44	Del_11q23.1	1	1
Del_1q44	Del_13q13.2	1	1
Del_2q22.1	Del_2q37.3	1	1
Del_2q22.1	Del_6q26	1	1
Del_2q22.1	Del_8p23.2	1	1
Del_2q22.1	Del_10q23.31	1	1
Del_2q22.1	Del_11q23.1	1	1
Del_2q22.1	Del_13q13.2	1	1
Del_2q22.1	Del_16q23.3	1	1
Del_2q37.3	Del_6q26	1	1
Del_2q37.3	Del_10q23.31	1	1
Del_2q37.3	Del_13q13.2	1	1
Del_3p26.3	Del_3p21.2	1	1
Del_3p26.3	Del_3p14.1	1	1
Del_3p26.3	Del_3p12.2	1	1
Del_3p26.3	Del_6q26	1	1
Del_3p26.3	Del_8p23.2	1	1
Del_3p26.3	Del_9p23	1	1
Del_3p26.3	Del_9p21.3	1	1
Del_3p26.3	Del_14q31.1	1	1
Del_3p21.2	Del_3p14.1	1	1
Del_3p21.2	Del_3p12.2	1	1
Del_3p21.2	Del_6q26	1	1
Del_3p21.2	Del_8p23.2	1	1
Del_3p21.2	Del_9p23	1	1
Del_3p21.2	Del_9p21.3	1	1
Del_3p21.2	Del_14q31.1	1	1
Del_3p14.1	Del_3p12.2	1	1
Del_3p14.1	Del_6q26	1	1
Del_3p14.1	Del_8p23.2	1	1
Del_3p14.1	Del_9p23	1	1
Del_3p14.1	Del_9p21.3	1	1
Del_3p14.1	Del_14q31.1	1	1
Del_3p12.2	Del_6q26	1	1
Del_3p12.2	Del_8p23.2	1	1
Del_3p12.2	Del_9p23	1	1
Del_3p12.2	Del_9p21.3	1	1
Del_3p12.2	Del_14q31.1	1	1
Del_4q34.3	Del_9p23	1	1
Del_4q34.3	Del_9p21.3	1	1
Del_4q34.3	Del_11q23.1	1	1
Del_4q34.3	Del_13q13.2	1	1
Del_4q34.3	Del_14q31.1	1	1
Del_4q34.3	Del_16q23.3	1	1
Del_6q26	Del_8p23.2	1	1
Del_6q26	Del_9p23	1	1
Del_6q26	Del_9p21.3	1	1
Del_6q26	Del_10q23.31	1	1
Del_6q26	Del_11q23.1	1	1
Del_6q26	Del_13q13.2	1	1
Del_6q26	Del_16q23.3	1	1
Del_8p23.2	Del_9p23	1	1
Del_8p23.2	Del_13q13.2	1	1
Del_8p23.2	Del_14q31.1	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_11q23.1	1	1
Del_9p23	Del_13q13.2	1	1
Del_9p23	Del_14q31.1	1	1
Del_9p21.3	Del_11q23.1	1	1
Del_9p21.3	Del_13q13.2	1	1
Del_9p21.3	Del_14q31.1	1	1
Del_10q23.31	Del_11q23.1	1	1
Del_10q23.31	Del_13q13.2	1	1
Del_10q23.31	Del_16q23.3	1	1
Del_13q13.2	Del_16q23.3	1	1
17p-Amp	3p-Del	1.01e-14	1
7p-Amp	Del_6q26	1.03e-06	1
3p-Del	Amp_17q24.3	1.03e-14	1
17p-Amp	Del_3p21.2	1.04e-21	1
17q-Amp	Del_10q23.31	1.08e-05	1
7q-Amp	Del_3p26.3	1.08e-10	1
VHL	16p-Amp	1.11e-12	1
17p-Amp	Del_9p23	1.12e-05	1
17p-Amp	Del_13q13.2	1.12e-05	1
16q-Amp	Del_3p21.2	1.12e-11	1
17q-Amp	Del_3p21.2	1.16e-21	1
17p-Amp	Del_3p26.3	1.19e-18	1
17q-Amp	Del_3p14.1	1.23e-15	1
PBRM1	17p-Del	1.24e-06	1
VHL	3p-Amp	1.25e-05	1
12p-Amp	Del_3p21.2	1.27e-07	1
16q-Amp	Del_3p26.3	1.27e-11	1
16q-Amp	Del_2q37.3	1.29e-05	1
17q-Amp	6q-Del	1.2e-06	1
17p-Amp	1p-Del	1.32e-06	1
Amp_17q24.3	Del_3p12.2	1.33e-09	1
12q-Amp	3p-Del	1.34e-07	1
1p-Del	Amp_17q24.3	1.37e-05	1
PBRM1	20p-Amp	1.39e-05	1
17q-Amp	Del_1p31.1	1.43e-08	1
Amp_7q31.2	Del_3p21.2	1.46e-09	1
6q-Del	Amp_17q24.3	1.47e-05	1
17p-Amp	14q-Del	1.47e-06	1
17q-Amp	Del_3p12.2	1.52e-11	1
VHL	20p-Amp	1.55e-06	1
20p-Amp	Del_3p26.3	1.56e-08	1
17p-Amp	6p-Del	1.58e-06	1
Amp_17q24.3	Del_6q26	1.5e-06	1
Amp_17q24.3	Del_3p26.3	1.62e-17	1
VHL	Del_2q22.1	1.65e-05	1
6p-Del	Amp_17q24.3	1.66e-05	1
Amp_7q31.2	Del_3p14.1	1.6e-06	1
PBRM1	16q-Amp	1.72e-08	1
VHL	7p-Amp	1.72e-11	1
3q-Amp	Del_3p14.1	1.73e-05	1
PBRM1	20q-Amp	1.7e-05	1
20p-Amp	Del_3p21.2	1.7e-07	1
6q-Del	Amp_7q31.2	1.82e-06	1
17p-Amp	Del_10q23.31	1.89e-06	1
12p-Amp	Del_3p26.3	1.89e-09	1
17p-Amp	Del_1p36.31	1.8e-07	1
7q-Amp	Del_3p21.2	1.9e-09	1
Amp_17q24.3	Del_10q23.31	2.01e-05	1
VHL	20q-Amp	2.03e-06	1
7q-Amp	3p-Del	2.03e-06	1
7p-Amp	3p-Del	2.03e-07	1
VHL	7q-Amp	2.06e-12	1
VHL	12p-Amp	2.08e-10	1
3q-Amp	Del_3p26.3	2.09e-08	1
6p-Del	Amp_7q31.2	2.16e-05	1
17p-Amp	6q-Del	2.16e-07	1
20q-Amp	Del_3p26.3	2.21e-08	1
17q-Amp	10q-Del	2.22e-05	1
16p-Amp	Del_3p21.2	2.24e-08	1
17p-Amp	17p-Del	2.26e-05	1
17q-Amp	Del_6q26	2.36e-07	1
VHL	17q-Amp	2.44e-16	1
17q-Amp	Del_3p26.3	2.49e-20	1
20q-Amp	Del_3p21.2	2.4e-07	1
20p-Amp	3p-Del	2.51e-06	1
3p-Amp	Del_3p21.2	2.52e-06	1
VHL	Del_1p36.31	2.53e-05	1
3p-Amp	Del_3p26.3	2.5e-08	1
PBRM1	17p-Amp	2.88e-10	1
VHL	Del_1q44	2e-06	1
17q-Amp	14q-Del	3.06e-05	1
PBRM1	Amp_17q24.3	3.09e-09	1
PBRM1	7p-Amp	3.21e-05	1
20q-Amp	3p-Del	3.21e-06	1
17p-Amp	Del_9p21.3	3.23e-06	1
17p-Amp	9q-Del	3.2e-05	1
7p-Amp	Del_3p26.3	3.3e-11	1
7q-Amp	6q-Del	3.45e-06	1
17p-Amp	Del_6q26	3.63e-09	1
17p-Amp	Del_14q31.1	3.64e-07	1
7q-Amp	6p-Del	3.7e-05	1
17p-Amp	9p-Del	3.81e-05	1
17p-Amp	10q-Del	3.86e-06	1
3p-Amp	3p-Del	3.88e-06	1
7p-Amp	6q-Del	3.91e-06	1
17p-Amp	Del_3p12.2	3.98e-12	1
17q-Amp	Del_1p36.31	4.04e-06	1
Amp_3q26.32	Del_3p26.3	4.05e-06	1
Amp_7q31.2	Del_6q26	4.08e-07	1
7p-Amp	6p-Del	4.12e-05	1
7q-Amp	Del_3p12.2	4.12e-05	1
17q-Amp	1p-Del	4.13e-07	1
12q-Amp	Del_3p14.1	4.26e-05	1
10q-Del	Amp_17q24.3	4.29e-05	1
16q-Amp	3p-Del	4.51e-08	1
VHL	Amp_7q31.2	4.52e-13	1
7q-Amp	Del_3p14.1	4.58e-06	1
16p-Amp	3p-Del	4.68e-06	1
7p-Amp	Del_3p12.2	4.83e-05	1
17p-Amp	Del_3p14.1	5.05e-16	1
PBRM1	3p-Amp	5.23e-05	1
VHL	Amp_17q24.3	5.38e-17	1
VHL	12q-Amp	5.39e-10	1
VHL	17p-Amp	5.41e-15	1
16q-Amp	Del_3p14.1	5.4e-10	1
Amp_7q31.2	Del_3p12.2	5.52e-05	1
12q-Amp	Del_3p26.3	5.56e-10	1
16p-Amp	Del_3p14.1	5.61e-07	1
12p-Amp	3p-Del	5.68e-07	1
7p-Amp	Del_3p14.1	5.69e-07	1
17p-Amp	Del_1p31.1	5.98e-08	1
12q-Amp	Del_3p21.2	6.05e-08	1
3q-Amp	3p-Del	6.09e-06	1
17q-Amp	3p-Del	6.21e-16	1
17q-Amp	8p-Del	6.44e-05	1
17q-Amp	Del_13q13.2	6.44e-05	1
Amp_3q26.32	Del_3p21.2	6.58e-06	1
VHL	13q-Del	6.61e-05	1
16q-Amp	Del_3p12.2	6.67e-07	1
7p-Amp	Del_3p21.2	6.82e-10	1
Amp_17q24.3	Del_3p21.2	6.89e-19	1
20p-Amp	Del_13q13.2	6e-04	1
PBRM1	17q-Amp	7.04e-09	1
3p-Del	Amp_7q31.2	7.29e-07	1
16p-Amp	Del_3p12.2	7.51e-05	1
7p-Amp	Del_13q13.2	7.65e-05	1
3q-Amp	Del_3p12.2	7.71e-05	1
16p-Amp	Del_2q37.3	7.88e-05	1
16p-Amp	Del_3p26.3	7.95e-09	1
PBRM1	7q-Amp	8.35e-06	1
VHL	1p-Del	8.49e-05	1
20p-Amp	Del_3p14.1	8.49e-05	1
12p-Amp	Del_3p14.1	8.76e-05	1
VHL	3q-Amp	8.77e-07	1
3q-Amp	Del_3p21.2	8.81e-08	1
7q-Amp	Del_6q26	8.84e-07	1
PBRM1	16p-Amp	8e-06	1
17q-Amp	Del_14q31.1	8e-06	1
17q-Amp	6p-Del	9.02e-06	1
17p-Amp	13q-Del	9.09e-05	1
VHL	16q-Amp	9.42e-13	1
Amp_7q31.2	Del_3p26.3	9.48e-11	1
PBRM1	Amp_7q31.2	9.55e-07	1
Amp_17q24.3	Del_3p14.1	9.61e-13	1
VHL	17p-Del	9.7e-07	1
