gene1	gene2	pval	qval
KRAS	NF1	0.00018	1
EGFR	LRP1B	0.000215	1
KRAS	Amp_7p11.2	0.000522	1
EGFR	STK11	0.000534	1
TP53	Del_6q14.3	0.000734	1
STK11	TP53	0.000964	1
EGFR	KEAP1	0.00105	1
TP53	1q-Amp	0.00121	1
STK11	Amp_5p15.33	0.00129	1
BRAF	KRAS	0.00137	1
ATM	TP53	0.00206	1
TP53	Del_6q26	0.0023	1
TP53	6q-Del	0.00445	1
SETD2	Amp_1q21.3	0.00465	1
CTNNB1	Amp_5p13.1	0.00503	1
EGFR	Amp_12p12.1	0.00573	1
LRP1B	Del_6q26	0.00621	1
ATM	Amp_7p11.2	0.00632	1
STK11	Del_8p23.2	0.00633	1
CSMD3	15q-Del	0.00671	1
LRP1B	Del_11q25	0.00679	1
KRAS	Amp_13q33.3	0.00693	1
CSMD3	EGFR	0.00772	1
EGFR	ZEB1	0.00784	1
CSMD3	6q-Del	0.00825	1
TP53	Del_3q29	0.00891	1
TTN	Del_6q26	0.00936	1
EGFR	NF1	0.0111	1
CSMD3	Del_6q14.3	0.0122	1
NF1	Del_6q26	0.0124	1
KRAS	Del_19q13.33	0.0138	1
LRP1B	9p-Del	0.0144	1
TTN	19p-Del	0.0144	1
6q-Del	Amp_3q26.2	0.0148	1
KRAS	Amp_19q12	0.0149	1
MMP16	Del_9p21.3	0.0155	1
PAPPA2	Amp_12q15	0.0162	1
SETD2	1q-Amp	0.0168	1
KRAS	Amp_5p15.33	0.0172	1
BRAF	Amp_12q15	0.0178	1
STK11	Del_13q34	0.0182	1
KRAS	7p-Amp	0.0187	1
STK11	Amp_5p13.1	0.0192	1
5p-Amp	19p-Del	0.0192	1
ATM	EPHA3	0.0193	1
BRAF	Amp_12q14.1	0.0196	1
TP53	Del_19p13.2	0.0197	1
CSMD3	17p-Del	0.0198	1
TTN	17p-Del	0.02	1
CTNNB1	5p-Amp	0.0203	1
CSMD3	Del_6q26	0.0208	1
Amp_12q15	Del_5q31.1	0.0221	1
EGFR	EPHA5	0.0222	1
EGFR	SMARCA4	0.0229	1
ZEB1	Del_19p13.3	0.0237	1
TTN	6q-Del	0.0238	1
Amp_12q14.1	Del_5q31.1	0.0242	1
CSMD3	13q-Del	0.0253	1
EPHB1	Amp_8q24.21	0.0254	1
CACNA1F	1q-Amp	0.0256	1
EPHA3	1q-Amp	0.0257	1
KRAS	Amp_4q12	0.0259	1
EGFR	TTN	0.0271	1
Amp_8p11.21	Del_17p13.3	0.0273	1
CACNA1F	Amp_20q13.33	0.0274	1
Amp_12q15	Del_3p21.31	0.0274	1
NLRP5	Del_9p21.3	0.0283	1
MMP16	Del_9q21.11	0.0285	1
PIK3CA	Amp_5p15.33	0.0289	1
LRP1B	6q-Del	0.0292	1
NF1	Del_12p13.2	0.0293	1
EPHB1	Amp_12q14.1	0.0298	1
KRAS	PIK3CA	0.0304	1
CTNNB1	Amp_5p15.33	0.0315	1
NLRP5	Del_19p13.2	0.0315	1
17p-Del	Amp_8p11.21	0.0316	1
KEAP1	Amp_5p15.33	0.0323	1
EPHB1	Del_13q34	0.0324	1
CTNNB1	KRAS	0.0329	1
CSMD3	Del_13q12.11	0.0334	1
TTN	21q-Del	0.0334	1
LRP1B	MET	0.0335	1
Amp_7p11.2	Del_3q29	0.0338	1
ATM	Amp_7q31.2	0.0353	1
TTN	Del_19p13.2	0.0358	1
KRAS	19q-Del	0.036	1
NF1	STK11	0.0369	1
ZEB1	Amp_6p21.1	0.0377	1
KRAS	Amp_3q26.2	0.0397	1
LRP1B	Del_6q14.3	0.0397	1
PTPRU	STK11	0.0398	1
STK11	Del_11p15.5	0.0398	1
SMARCA4	7p-Amp	0.0399	1
KRAS	Amp_7q31.2	0.0403	1
5p-Amp	9q-Del	0.0403	1
PAPPA2	Amp_1p34.3	0.0415	1
KEAP1	Amp_11q13.3	0.0418	1
PRKCG	Amp_1q21.3	0.0426	1
EGFR	MET	0.0432	1
KRAS	Amp_5p13.1	0.0447	1
MET	Del_6q26	0.0456	1
MET	Del_18q23	0.0456	1
MAP2	Amp_11q13.3	0.0458	1
Amp_7p11.2	Del_1p13.1	0.0461	1
CSMD3	19p-Del	0.0473	1
PAPPA2	Amp_6p21.1	0.0482	1
SETD2	Amp_5p15.33	0.0483	1
TP53	Amp_1q21.3	0.0483	1
KRAS	SMARCA4	0.0492	1
KRAS	RB1	0.0503	1
KRAS	18p-Del	0.0503	1
MMP16	9q-Del	0.0503	1
EGFR	Del_3q29	0.0504	1
ZEB1	Del_19p13.2	0.0512	1
NF1	Del_13q12.11	0.0515	1
ROBO2	STK11	0.0525	1
TPTE	Del_9q21.11	0.0528	1
6q-Del	Amp_12q14.1	0.0529	1
NF1	9p-Del	0.053	1
ATM	EGFR	0.0544	1
RBM10	Del_9q21.11	0.0544	1
TTN	Del_6q14.3	0.0547	1
FTSJD1	KEAP1	0.0548	1
NF1	Del_16q24.3	0.0561	1
Amp_7p11.2	Del_5q31.1	0.0565	1
RB1	STK11	0.0574	1
KEAP1	Del_8p23.2	0.0575	1
5p-Amp	21q-Del	0.0575	1
13q-Del	Amp_6p21.1	0.0576	1
APC	Del_17p13.3	0.0585	1
CSMD3	Del_15q15.1	0.0585	1
TPTE	17p-Del	0.0586	1
MET	1q-Amp	0.059	1
BRAF	7q-Amp	0.0596	1
MMP16	9p-Del	0.0604	1
EGFR	EPHA3	0.061	1
EGFR	Del_19p13.2	0.061	1
EPHB1	Del_3p21.31	0.063	1
TPTE	9p-Del	0.0633	1
RBM10	Del_16q24.3	0.0635	1
3q-Del	Amp_8q24.21	0.0639	1
Amp_14q13.3	Del_19p13.2	0.0646	1
FTSJD1	9p-Del	0.0658	1
TP53	Del_1p13.1	0.0666	1
EGFR	Del_22q13.32	0.0667	1
PRKCG	Amp_7p11.2	0.0673	1
TTN	Del_3q29	0.0676	1
APC	1q-Amp	0.0677	1
ABCB1	EGFR	0.0684	1
STK11	5p-Amp	0.0684	1
8q-Amp	Del_11p15.5	0.0684	1
NLRP5	Del_4q34.3	0.0693	1
ZEB1	Del_16q24.3	0.0693	1
FTSJD1	Del_9p23	0.0703	1
MAP2	Amp_12p12.1	0.0707	1
NF1	18q-Del	0.0708	1
7p-Amp	Del_3q29	0.0711	1
MGA	SETD2	0.0715	1
SETD2	Del_9q21.11	0.0715	1
ZEB1	Del_9p21.3	0.0719	1
TTN	22q-Del	0.0725	1
ADAMTS19	MAP2	0.0731	1
MAP2	Del_1p13.1	0.0731	1
ARID2	Amp_12p12.1	0.0738	1
FTSJD1	Amp_12p12.1	0.0738	1
ADAMTS19	EGFR	0.074	1
EGFR	Del_1p13.1	0.074	1
8q-Amp	19p-Del	0.074	1
RBM10	Del_3p21.31	0.0742	1
RBM10	Del_5q12.1	0.0742	1
NLRP5	Del_19p13.3	0.0752	1
MMP16	Del_9p23	0.0755	1
NLRP5	Del_19q13.33	0.0755	1
ZEB1	Del_9p23	0.0755	1
5p-Amp	9p-Del	0.0757	1
Amp_20q13.33	Del_18q21.32	0.0763	1
MAP2	6q-Del	0.0764	1
SETD2	Del_15q11.2	0.0767	1
KRAS	Amp_22q11.22	0.0772	1
ACVR1B	Del_9p21.3	0.078	1
STIM1	Del_9p21.3	0.078	1
KEAP1	NFE2L2	0.0782	1
CSMD3	Amp_20q13.33	0.0789	1
CDKN2A	Del_6q14.3	0.079	1
TPTE	Del_3p21.31	0.0798	1
TPTE	5q-Del	0.0801	1
RBM10	Del_16q23.1	0.0802	1
MAP2	13q-Del	0.0803	1
EPHB1	7q-Amp	0.0805	1
ARID2	KRAS	0.081	1
Amp_3q26.2	Del_6q26	0.0818	1
NF1	Del_3q29	0.0822	1
CSMD3	3q-Del	0.0824	1
PAPPA2	Del_3q29	0.0824	1
8q-Amp	Del_9p21.3	0.0824	1
TP53	Amp_12q15	0.0831	1
RB1	Del_9p21.3	0.0833	1
FCRLA	Del_9p21.3	0.0835	1
8q-Amp	Del_12p13.2	0.0838	1
PAK1	Amp_5p13.1	0.0841	1
MAP2	Del_17p13.3	0.0843	1
PDGFRA	STK11	0.0846	1
STK11	ZEB1	0.0846	1
PIK3CA	Amp_1q21.3	0.0848	1
CSMD3	MET	0.0851	1
ATM	18p-Del	0.0855	1
KRAS	MGA	0.0861	1
LRP1B	21q-Del	0.0865	1
MET	Amp_5p13.1	0.0873	1
ARID2	Amp_12q15	0.0876	1
FTSJD1	Amp_12q15	0.0876	1
MAP2	22q-Del	0.0881	1
TTN	Del_19q13.33	0.0893	1
NLRP5	19p-Del	0.0897	1
CACNA1F	8p-Del	0.0899	1
EPHA5	Del_19p13.3	0.0902	1
ATM	7p-Amp	0.0911	1
SMARCA4	6q-Del	0.0914	1
ATM	Amp_5p15.33	0.0925	1
PRKCG	Del_18q21.32	0.0926	1
ROBO2	3p-Del	0.0927	1
3p-Del	Amp_12q14.1	0.0927	1
Amp_1p34.3	Del_6q14.3	0.0929	1
Amp_12q14.1	Del_6q14.3	0.0929	1
RBM10	Del_4q34.3	0.0935	1
Amp_3q26.2	Del_17p13.3	0.0936	1
NFE2L2	Amp_1q21.3	0.0942	1
EGFR	Del_10p15.3	0.0948	1
EPHB1	Del_3p26.2	0.0948	1
SETD2	Del_3p21.31	0.0948	1
CSMD3	Del_3p21.31	0.0953	1
PAPPA2	1q-Amp	0.0957	1
PRKCG	Del_18q23	0.0964	1
STK11	Amp_17q23.1	0.0967	1
TP53	3q-Del	0.0969	1
TTN	9q-Del	0.0973	1
9p-Del	Amp_7q31.2	0.0977	1
Amp_7q31.2	Del_22q13.32	0.0977	1
EPHA5	Del_9p23	0.0978	1
TTN	Del_19p13.3	0.0978	1
EPHA5	19p-Del	0.0983	1
SETD2	Amp_20q13.33	0.0986	1
Amp_20q13.33	Amp_Xq28	0.0986	1
LRP1B	Del_19p13.3	0.0987	1
Amp_7p11.2	Del_19p13.2	0.0987	1
PIK3CA	Del_17p13.3	0.0988	1
ATM	TTN	0.0992	1
CACNA1F	17p-Del	0.1	1
EGFR	Del_6q26	0.1	1
RBM10	Del_19q13.33	0.101	1
ZEB1	Del_4q34.3	0.101	1
Amp_8q24.21	Del_12p13.2	0.101	1
ADAMTS19	1q-Amp	0.104	1
PRKCG	Del_13q12.11	0.104	1
SMARCA4	Del_13q12.11	0.104	1
RPL5	TP53	0.105	1
EPHA5	1q-Amp	0.106	1
LRP1B	Del_1p36.13	0.106	1
EGFR	Amp_18q11.2	0.107	1
LRP1B	3p-Del	0.107	1
TTN	8p-Del	0.107	1
KEAP1	TP53	0.108	1
MET	18q-Del	0.108	1
MET	6q-Del	0.108	1
8q-Amp	3q-Del	0.108	1
RBM10	Del_3p26.2	0.109	1
SMARCA4	Del_11q25	0.109	1
WDR66	Del_6q14.3	0.109	1
KRAS	Amp_11q13.3	0.11	1
SETD2	STK11	0.11	1
7p-Amp	Del_1p13.1	0.11	1
MMP16	Amp_20q13.33	0.111	1
SLAMF9	Del_9p23	0.111	1
CTNNB1	TP53	0.112	1
Amp_1p34.3	Del_6q26	0.112	1
Amp_14q13.3	Del_9p21.3	0.112	1
NFE2L2	Amp_7p11.2	0.113	1
CSMD3	Del_3q29	0.114	1
DNMT3A	Del_9p21.3	0.116	1
KEAP1	U2AF1	0.116	1
KRAS	SETD2	0.116	1
KRAS	Amp_Xq28	0.116	1
MAP2	3p-Del	0.116	1
MET	TP53	0.117	1
PDGFRA	SETD2	0.117	1
PRKCG	1q-Amp	0.117	1
SETD2	Amp_5p13.1	0.117	1
EPHB1	8q-Amp	0.118	1
8q-Amp	Del_3p21.31	0.118	1
PIK3CA	Amp_11q13.3	0.119	1
TTN	Del_21q11.2	0.119	1
FTSJD1	Del_9p21.3	0.12	1
MET	STK11	0.12	1
STK11	5q-Del	0.12	1
5q-Del	Amp_12q15	0.12	1
Amp_14q13.3	Del_1p36.13	0.12	1
APC	18q-Del	0.121	1
BRAF	Amp_20q13.33	0.121	1
CACNA1F	Del_3p21.31	0.121	1
FAM65C	8p-Del	0.121	1
18q-Del	Amp_8p11.21	0.121	1
CDKN2A	Amp_20q13.33	0.122	1
EGFR	ROBO2	0.122	1
7p-Amp	Del_12p13.2	0.122	1
FTSJD1	Del_9q21.11	0.123	1
TTN	9p-Del	0.123	1
EGFR	TGFBR3	0.125	1
SETD2	Del_19q13.33	0.125	1
8q-Amp	19q-Del	0.125	1
3q-Del	Amp_8p11.21	0.125	1
Amp_19q12	Del_6q26	0.125	1
ATM	Amp_10p15.1	0.126	1
ZEB1	19p-Del	0.126	1
7q-Amp	Del_1p13.1	0.126	1
KRAS	Amp_10p15.1	0.127	1
LRP1B	Del_3p26.2	0.127	1
NF1	Del_17p13.3	0.127	1
STK11	Amp_7p11.2	0.128	1
CTNNB1	Amp_12p12.1	0.129	1
EPHA5	Amp_1p34.3	0.129	1
Amp_8p11.21	Del_18q21.32	0.129	1
Amp_12q14.1	Del_6q26	0.13	1
KEAP1	Amp_7p11.2	0.131	1
KRAS	Amp_20q13.33	0.131	1
LRP1B	Del_13q12.11	0.131	1
Amp_18q11.2	Del_3p21.31	0.131	1
CSMD3	PIK3CA	0.132	1
TP53	19p-Del	0.132	1
DNMT3A	6q-Del	0.134	1
EGFR	Del_13q34	0.134	1
KEAP1	MAP2	0.134	1
SETD2	Del_3p26.2	0.134	1
BRAF	Del_11q23.1	0.135	1
EGFR	Del_6q14.3	0.135	1
LRP1B	9q-Del	0.135	1
ARID2	EGFR	0.136	1
MET	Amp_1q21.3	0.136	1
RBM10	TP53	0.136	1
8q-Amp	3p-Del	0.136	1
Amp_7q31.2	Amp_12q15	0.136	1
SMARCA4	Amp_7p11.2	0.137	1
TTN	15q-Del	0.137	1
Amp_14q13.3	Del_12q12	0.137	1
KRAS	MAP2	0.138	1
FCRLA	Amp_20q13.33	0.139	1
KEAP1	8p-Del	0.139	1
RB1	Amp_11q13.3	0.139	1
ROBO2	Del_3q29	0.139	1
WT1	Del_13q12.11	0.139	1
18p-Del	Amp_11q13.3	0.139	1
CACNA1F	Del_8p23.2	0.14	1
EPHA3	Del_15q11.2	0.14	1
EPHB1	Del_13q12.11	0.14	1
EPHB1	Del_17p13.3	0.14	1
MAP2	Del_6q14.3	0.14	1
MMP16	Del_10q26.3	0.14	1
PIK3CA	STK11	0.141	1
TCEAL5	8p-Del	0.141	1
TPTE	Del_19p13.2	0.141	1
CXCR7	KEAP1	0.142	1
ERBB2	STK11	0.142	1
SMARCA4	Del_11q23.1	0.142	1
STK11	U2AF1	0.142	1
CDKN2A	Amp_14q13.3	0.143	1
NF1	13q-Del	0.143	1
TP53	Del_19p13.3	0.143	1
SETD2	19p-Del	0.144	1
SETD2	Del_1p13.1	0.144	1
TPTE	19p-Del	0.144	1
Amp_8q24.21	Del_3p21.31	0.144	1
EGFR	Del_19p13.3	0.145	1
EPHB1	Amp_14q13.3	0.145	1
8q-Amp	Del_19p13.3	0.145	1
Amp_7q31.2	Amp_12q14.1	0.145	1
EGFR	NFE2L2	0.146	1
EGFR	TCEAL5	0.146	1
EPHA3	20q-Amp	0.146	1
LRP1B	18p-Del	0.146	1
BRAF	Del_10q26.3	0.147	1
SETD2	Del_19p13.3	0.147	1
CTNNB1	Del_9p23	0.148	1
NUDT11	Amp_5p15.33	0.148	1
OR2L13	RBM10	0.148	1
RBM10	Amp_18q11.2	0.148	1
RBM10	Del_11q25	0.148	1
EMG1	TP53	0.149	1
EPHA5	19q-Del	0.149	1
NUDT11	TP53	0.149	1
GNAS	Amp_11q13.3	0.15	1
MAP2	17p-Del	0.15	1
TCEAL5	Del_6q26	0.15	1
EPHA3	Del_5q31.1	0.151	1
STK11	Amp_7q31.2	0.152	1
5p-Amp	Del_1p36.13	0.152	1
EGFR	Del_Xp22.2	0.153	1
MMP16	20q-Amp	0.153	1
ZEB1	8p-Del	0.153	1
ARID2	Amp_19q12	0.154	1
CTNNB1	Amp_12q14.1	0.154	1
EPHB1	3p-Del	0.154	1
FTSJD1	Amp_7q31.2	0.154	1
PIK3CA	Amp_Xq28	0.154	1
SRPX	1q-Amp	0.154	1
TPTE	Del_19p13.3	0.154	1
CACNA1F	Del_19q13.33	0.155	1
CSMD3	20p-Amp	0.155	1
NF1	Del_3q11.1	0.155	1
22q-Del	Amp_17q12	0.155	1
Amp_3q26.2	Del_6q14.3	0.155	1
LRP1B	PPP3CA	0.156	1
U2AF1	Amp_1q21.3	0.156	1
KRAS	MET	0.157	1
KRAS	20q-Amp	0.157	1
KRAS	5q-Del	0.157	1
RB1	ZEB1	0.157	1
ATM	9p-Del	0.158	1
CSMD3	NFE2L2	0.158	1
KRAS	7q-Amp	0.158	1
NF1	Del_9p23	0.158	1
NF1	Del_10p15.3	0.158	1
U2AF1	Amp_7p11.2	0.158	1
WT1	Amp_20q13.33	0.159	1
APC	Del_19p13.2	0.16	1
NF1	Del_15q11.2	0.16	1
PIK3CA	Amp_5p13.1	0.16	1
TCEAL5	Del_17p13.3	0.16	1
Amp_5p15.33	Del_1p36.13	0.16	1
CXCR7	Del_9p23	0.161	1
KEAP1	7p-Amp	0.161	1
KEAP1	Amp_20q13.33	0.161	1
MET	Amp_3q26.2	0.161	1
MGA	17p-Del	0.161	1
PAK1	5p-Amp	0.161	1
8q-Amp	Del_19p13.2	0.161	1
ARID2	Amp_11q13.3	0.163	1
ARID2	Del_16q23.1	0.163	1
ATM	EPHB1	0.164	1
ATM	Del_3p21.31	0.164	1
CSMD3	Del_15q11.2	0.164	1
PIK3CA	19p-Del	0.164	1
CACNA1F	Del_21q11.2	0.165	1
PPP3CA	Del_9p21.3	0.165	1
MET	Del_6q14.3	0.166	1
8p-Del	Amp_10p15.1	0.166	1
PAK1	Amp_5p15.33	0.167	1
ZNF608	Amp_5p15.33	0.167	1
Amp_7q31.2	Del_14q32.33	0.167	1
EGFR	PPP3CA	0.169	1
EGFR	Del_2q22.1	0.169	1
KRAS	13q-Del	0.169	1
SMARCA4	5q-Del	0.169	1
Amp_7p11.2	Del_12p13.2	0.169	1
CXCR7	STK11	0.17	1
RBM10	Del_17p13.3	0.17	1
STK11	1p-Amp	0.17	1
ATM	Amp_5p13.1	0.171	1
EPHA3	Del_22q13.32	0.171	1
EPHA5	NFE2L2	0.171	1
GAGE2A	Amp_14q13.3	0.171	1
RIT1	Amp_14q13.3	0.171	1
RPL5	Amp_14q13.3	0.171	1
EGFR	Amp_10p15.1	0.172	1
EGFR	Del_10q26.3	0.172	1
FTSJD1	9q-Del	0.172	1
RBM10	3p-Del	0.172	1
SMARCA4	17p-Del	0.172	1
ACVR1B	KEAP1	0.173	1
ARID1A	Amp_12p12.1	0.173	1
KCNQ5	KEAP1	0.173	1
EPHB1	KRAS	0.174	1
KRAS	Del_3p21.31	0.174	1
KRAS	Del_5q12.1	0.174	1
Amp_7p11.2	Del_19p13.3	0.174	1
CSMD3	3p-Del	0.175	1
ADAMTS19	Del_10p15.3	0.176	1
CSMD3	Del_19p13.3	0.176	1
ERBB2	Del_6q14.3	0.176	1
NF1	WDR66	0.176	1
NFE2L2	1q-Amp	0.176	1
PIK3CA	Del_19p13.3	0.176	1
ARID2	Amp_1q21.3	0.177	1
NLGN4X	Del_11p15.5	0.177	1
OR2L13	SETD2	0.177	1
RB1	SETD2	0.177	1
7p-Amp	Del_18q23	0.177	1
EGFR	Amp_17q12	0.178	1
FTSJD1	1q-Amp	0.178	1
KEAP1	ROBO2	0.178	1
SETD2	TP53	0.178	1
NLGN4X	18q-Del	0.179	1
PRKCG	Amp_12p12.1	0.179	1
STK11	Amp_18q11.2	0.179	1
EPHB1	Del_10q26.3	0.18	1
RBM10	Del_13q34	0.18	1
SMARCA4	TPTE	0.18	1
Amp_10p15.1	Amp_19q12	0.18	1
EGFR	Amp_1q21.3	0.181	1
NF1	6q-Del	0.181	1
ARID2	7q-Amp	0.182	1
ARID2	Del_4q34.3	0.182	1
FTSJD1	ZEB1	0.182	1
NFE2L2	7p-Amp	0.182	1
ZEB1	Amp_12q14.1	0.183	1
Amp_12q14.1	Del_4q34.3	0.183	1
MAP2	9p-Del	0.184	1
SMARCA4	Del_3q29	0.184	1
SMARCA4	Del_5q31.1	0.184	1
RBM10	Del_11q23.1	0.185	1
ARID2	7p-Amp	0.186	1
CDKN2A	6q-Del	0.186	1
G3BP1	PAPPA2	0.186	1
MAP2	Del_3p21.31	0.186	1
MAP2	Del_6q26	0.186	1
PRKCG	18q-Del	0.186	1
20p-Amp	18q-Del	0.186	1
20p-Amp	6q-Del	0.186	1
Amp_7p11.2	Del_5q12.1	0.186	1
Amp_8q24.21	Del_3q29	0.186	1
APC	Del_6q14.3	0.187	1
ZEB1	Del_17p13.3	0.187	1
ADAMTS19	OR2L13	0.188	1
TPTE	21q-Del	0.188	1
18p-Del	19p-Del	0.188	1
Amp_18q11.2	Del_1p13.1	0.188	1
GNAS	SETD2	0.189	1
KEAP1	LRP1B	0.189	1
LRP1B	13q-Del	0.189	1
ATM	9q-Del	0.19	1
ROBO2	Amp_6p21.1	0.19	1
ROBO2	Amp_12q15	0.19	1
ERBB2	8p-Del	0.191	1
PAPPA2	3q-Del	0.191	1
ZEB1	Amp_1q21.3	0.191	1
CTNNB1	MGA	0.192	1
DNMT3A	Del_9q21.11	0.192	1
APC	Del_16q24.3	0.193	1
EGFR	Amp_3q26.2	0.193	1
EGFR	Amp_17q23.1	0.193	1
MET	Del_18q21.32	0.193	1
NLRP5	Del_3q29	0.193	1
NLGN4X	7q-Amp	0.194	1
STIM1	Del_9p23	0.194	1
ZNF608	Del_9p23	0.194	1
EPHB1	20q-Amp	0.195	1
MET	Del_3p21.31	0.195	1
MET	Del_5q12.1	0.195	1
PAPPA2	Amp_20q13.33	0.195	1
TPTE	Del_5q31.1	0.195	1
LRP1B	Del_19q13.33	0.196	1
STK11	18q-Del	0.196	1
EGFR	U2AF1	0.197	1
EGFR	Del_18q23	0.197	1
KEAP1	Del_11q23.1	0.197	1
KEAP1	Del_13q34	0.197	1
SETD2	8q-Amp	0.197	1
8q-Amp	Amp_Xq28	0.197	1
BRAF	Amp_7q31.2	0.198	1
EPHB1	Del_9q21.11	0.198	1
G3BP1	5p-Amp	0.198	1
GAGE2A	5p-Amp	0.198	1
ROBO2	Amp_14q13.3	0.198	1
1q-Amp	Del_11q23.1	0.198	1
1q-Amp	Del_Xp22.2	0.198	1
CACNA1F	22q-Del	0.199	1
CACNA1F	Del_10p15.3	0.199	1
CXCR7	Amp_1q21.3	0.199	1
Amp_1p34.3	Amp_12p12.1	0.199	1
PRKCG	Amp_12q15	0.2	1
RBM10	Amp_10p15.1	0.2	1
SMARCA4	8p-Del	0.2	1
Amp_7p11.2	Del_6q26	0.2	1
Amp_12q15	Amp_22q11.22	0.2	1
GNAS	STK11	0.201	1
MAP2	15q-Del	0.201	1
20q-Amp	Del_18q23	0.201	1
ARID2	Amp_8q24.21	0.202	1
CACNA1F	9p-Del	0.202	1
EMG1	TTN	0.202	1
EPHA3	Amp_8p11.21	0.202	1
ERBB2	Del_6q26	0.202	1
STK19	TTN	0.202	1
TTN	13q-Del	0.202	1
1q-Amp	Del_2q22.1	0.202	1
ARID1A	Amp_6p21.1	0.203	1
ARID2	Amp_Xq28	0.203	1
FTSJD1	Amp_Xq28	0.203	1
SETD2	Amp_6p21.1	0.203	1
STIM1	STK11	0.203	1
Amp_12q15	Del_3p26.2	0.203	1
EPHA3	KRAS	0.204	1
CTNNB1	TTN	0.205	1
MET	Amp_11q13.3	0.205	1
EMG1	Amp_1q21.3	0.206	1
PAPPA2	Del_6q14.3	0.206	1
PRKCG	Del_9p21.3	0.206	1
TPTE	6q-Del	0.206	1
20p-Amp	Del_9p21.3	0.206	1
CSMD3	RB1	0.207	1
CSMD3	18p-Del	0.207	1
5p-Amp	Del_19p13.2	0.207	1
6q-Del	Amp_1p34.3	0.207	1
CDKN2A	Amp_12q14.1	0.208	1
LRP1B	5q-Del	0.208	1
MAP2	Del_13q12.11	0.208	1
PRKCG	ROBO2	0.208	1
PRKCG	Amp_12q14.1	0.208	1
ROBO2	20p-Amp	0.208	1
SLAMF9	Amp_20q13.33	0.208	1
APC	8p-Del	0.209	1
BRAF	15q-Del	0.21	1
CTNNB1	Del_15q15.1	0.21	1
EPHB1	17p-Del	0.21	1
KEAP1	STRA8	0.21	1
SMAD4	Amp_3q26.2	0.21	1
CACNA1F	RB1	0.211	1
CACNA1F	Amp_18q11.2	0.211	1
APC	Amp_19q12	0.212	1
DNMT3A	Del_6q14.3	0.212	1
EPHB1	Del_3q29	0.212	1
Amp_7q31.2	Del_3q29	0.212	1
BRAF	STK11	0.213	1
ERBB2	Del_13q12.11	0.213	1
ROBO2	Del_21q11.2	0.213	1
STK11	Amp_3q26.2	0.213	1
Amp_12q14.1	Del_3p26.2	0.213	1
EPHA5	Del_19p13.2	0.214	1
FTSJD1	Del_1p13.1	0.214	1
MMP16	RBM10	0.214	1
RBM10	5q-Del	0.215	1
BRAF	Del_9p21.3	0.216	1
CDKN2A	NLGN4X	0.216	1
APC	8q-Amp	0.217	1
EPHA3	7q-Amp	0.217	1
EPHA3	Amp_7p11.2	0.217	1
SETD2	Del_14q32.33	0.217	1
SETD2	Del_Xp22.2	0.217	1
7q-Amp	Del_19p13.2	0.217	1
8q-Amp	Del_3q29	0.217	1
ATM	Amp_6p21.1	0.218	1
KRAS	Del_2q22.1	0.218	1
KRAS	Del_Xp22.2	0.218	1
STK19	Amp_8q24.21	0.218	1
KRAS	Amp_8p11.21	0.219	1
SLC4A3	17p-Del	0.219	1
SMAD4	17p-Del	0.219	1
19p-Del	Amp_12q15	0.219	1
ATM	Del_19q13.33	0.22	1
CSMD3	Del_11q23.1	0.22	1
KRAS	Del_5q31.1	0.221	1
SMARCA4	Del_6q26	0.221	1
CACNA1F	Amp_12p12.1	0.222	1
SRPX	Amp_12p12.1	0.222	1
STIM1	Amp_7p11.2	0.222	1
19q-Del	Amp_12p12.1	0.222	1
3q-Del	Amp_12q15	0.222	1
G3BP1	Amp_5p15.33	0.223	1
GAGE2A	Amp_5p15.33	0.223	1
ATM	CDKN2A	0.224	1
TP53	Del_1p36.13	0.224	1
APC	Del_6q26	0.225	1
ARID1A	NLGN4X	0.225	1
NLGN4X	Amp_Xq28	0.225	1
PAPPA2	19q-Del	0.225	1
PAPPA2	21q-Del	0.225	1
SETD2	Del_13q12.11	0.225	1
SETD2	Del_13q34	0.225	1
EPHB1	Del_6q14.3	0.226	1
FTSJD1	PIK3CA	0.226	1
FTSJD1	STK11	0.226	1
FTSJD1	Del_12p13.2	0.226	1
MET	7q-Amp	0.226	1
MET	Del_4q34.3	0.226	1
MGA	Del_17p13.3	0.226	1
TCEAL5	Del_19p13.3	0.226	1
ZEB1	20q-Amp	0.226	1
ZEB1	5q-Del	0.226	1
FCRLA	KEAP1	0.227	1
G3BP1	KRAS	0.227	1
KEAP1	Amp_1p34.3	0.227	1
KRAS	STRA8	0.227	1
LRP1B	Del_10p15.3	0.227	1
ZEB1	7p-Amp	0.227	1
CXCR7	Del_18q21.32	0.228	1
NLRP5	SLC4A3	0.228	1
PIK3CA	8p-Del	0.228	1
SLC4A3	Del_16q24.3	0.228	1
SMAD4	Del_16q24.3	0.228	1
TPTE	Del_5q12.1	0.228	1
TRERF1	Del_5q31.1	0.228	1
8q-Amp	Del_12q24.33	0.228	1
EGFR	NLRP5	0.229	1
TTN	Del_13q12.11	0.229	1
NLRP5	9p-Del	0.23	1
ROBO2	3q-Del	0.23	1
SRPX	18q-Del	0.23	1
WDR66	6q-Del	0.23	1
WT1	6q-Del	0.23	1
19p-Del	Amp_12q14.1	0.23	1
3q-Del	Amp_12q14.1	0.23	1
Amp_4q12	Amp_12q14.1	0.23	1
Amp_12q14.1	Del_3q11.1	0.23	1
ATM	ROBO2	0.231	1
TP53	Del_19q13.33	0.231	1
APC	9q-Del	0.232	1
EPHA3	Amp_12q15	0.232	1
KRAS	Del_9p21.3	0.232	1
SETD2	Amp_10p15.1	0.232	1
20p-Amp	Del_19p13.2	0.232	1
Amp_10p15.1	Amp_Xq28	0.232	1
CACNA1F	6q-Del	0.233	1
GAGE2A	Del_9p23	0.233	1
CXCR7	Del_18q23	0.234	1
LRP1B	Del_21q11.2	0.234	1
SMARCA4	STK11	0.234	1
Amp_6p21.1	Del_12p13.2	0.236	1
Amp_8q24.21	Del_14q32.33	0.236	1
ABCB1	Amp_7p11.2	0.237	1
MET	Amp_17q12	0.237	1
TTN	19q-Del	0.237	1
U2AF1	7p-Amp	0.237	1
U2AF1	Amp_20q13.33	0.237	1
EPHA3	7p-Amp	0.238	1
KRAS	TTN	0.238	1
NLGN4X	3q-Del	0.238	1
NLGN4X	Amp_4q12	0.238	1
PTPRU	Del_6q14.3	0.238	1
7p-Amp	Del_19p13.2	0.238	1
Amp_1p34.3	Del_13q34	0.238	1
CACNA1F	3p-Del	0.239	1
CTNNB1	Amp_11q13.3	0.239	1
NFE2L2	Amp_14q13.3	0.239	1
RBM10	SMARCA4	0.239	1
RBM10	17p-Del	0.239	1
RBM10	Del_15q11.2	0.239	1
ROBO2	Amp_8q24.21	0.239	1
SMARCA4	Amp_12p12.1	0.239	1
KEAP1	Amp_5p13.1	0.24	1
STK11	17q-Amp	0.24	1
ABCB1	20p-Amp	0.241	1
MAP2	17q-Amp	0.241	1
MMP16	20p-Amp	0.241	1
CSMD3	Del_17p13.3	0.242	1
CTNNB1	8q-Amp	0.242	1
DNMT3A	EGFR	0.242	1
DNMT3A	Amp_14q13.3	0.242	1
KEAP1	13q-Del	0.242	1
NF1	RBM10	0.242	1
NF1	9q-Del	0.242	1
STK11	Del_18q21.32	0.242	1
ZEB1	Amp_17q23.1	0.242	1
ZEB1	Del_9q21.11	0.242	1
ACVR1B	Del_6q14.3	0.243	1
APC	7q-Amp	0.243	1
5p-Amp	19q-Del	0.243	1
7q-Amp	Del_3q29	0.243	1
ADAMTS19	Del_9p21.3	0.244	1
EMG1	Del_9p21.3	0.244	1
NUDT11	Del_9p21.3	0.244	1
EPHA5	Del_9p21.3	0.245	1
MAP2	Del_19q13.33	0.245	1
19q-Del	Amp_8q24.21	0.245	1
CXCR7	Del_17p13.3	0.246	1
SRPX	Amp_6p21.1	0.246	1
WDR66	Amp_12q15	0.246	1
WT1	Amp_12q15	0.246	1
19q-Del	Amp_12q15	0.246	1
Amp_12q15	Del_4q22.1	0.246	1
EPHA3	Amp_12q14.1	0.247	1
STK11	7p-Amp	0.247	1
LRP1B	Del_9q21.11	0.248	1
MMP16	Amp_12q15	0.248	1
NFE2L2	Amp_12p12.1	0.248	1
RBM10	5p-Amp	0.248	1
ROBO2	13q-Del	0.248	1
SMAD4	Amp_19q12	0.248	1
TRERF1	Del_5q12.1	0.248	1
ARID1A	MET	0.249	1
CSMD3	Del_1p36.13	0.249	1
CSMD3	Del_19p13.2	0.249	1
KRAS	Del_13q34	0.249	1
MET	SETD2	0.249	1
MET	Del_3p26.2	0.249	1
SETD2	20q-Amp	0.249	1
SETD2	Del_19p13.2	0.249	1
ZEB1	Amp_7p11.2	0.249	1
BRAF	EPHA5	0.25	1
CDKN2A	MGA	0.25	1
CDKN2A	Amp_17q23.1	0.25	1
CDKN2A	Del_9q21.11	0.25	1
FTSJD1	Del_19p13.3	0.25	1
Amp_8p11.21	Del_3q29	0.25	1
5q-Del	Amp_20q13.33	0.251	1
ARID2	18p-Del	0.252	1
EPHB1	Amp_7q31.2	0.252	1
FTSJD1	OR2L13	0.252	1
FTSJD1	18p-Del	0.252	1
FTSJD1	Del_11q25	0.252	1
RB1	18q-Del	0.252	1
Amp_1q21.3	Del_12q12	0.252	1
EPHB1	Del_19p13.3	0.253	1
NLRP6	Del_9p21.3	0.253	1
RBM10	Del_5q31.1	0.253	1
STK11	Del_Xp22.2	0.253	1
ADAMTS19	ATM	0.254	1
NUDT11	Amp_5p13.1	0.254	1
ROBO2	SRPX	0.254	1
Amp_12q14.1	Del_4q22.1	0.254	1
CACNA1F	Amp_12q15	0.255	1
NF1	Del_10q26.3	0.255	1
PDGFRA	17p-Del	0.255	1
ZEB1	17p-Del	0.255	1
Amp_1p34.3	Del_19p13.2	0.255	1
TCEAL5	18q-Del	0.256	1
TCEAL5	6q-Del	0.256	1
Amp_12p12.1	Del_5q31.1	0.256	1
ATM	Del_9p21.3	0.257	1
NF1	U2AF1	0.257	1
NLRP5	STK11	0.257	1
PIK3CA	Amp_10p15.1	0.257	1
PIK3CA	Del_8p23.2	0.257	1
SMARCA4	Amp_1q21.3	0.257	1
STK11	Amp_Xq28	0.257	1
STK11	Del_16q24.3	0.257	1
1q-Amp	Del_21q11.2	0.257	1
EPHA5	Del_12q24.33	0.258	1
MGA	Del_19q13.33	0.258	1
SMAD4	Del_16q23.1	0.258	1
Amp_7p11.2	Amp_17q23.1	0.258	1
Amp_8p11.21	Del_18q23	0.258	1
ACVR1B	8p-Del	0.259	1
ATM	NF1	0.26	1
CDKN2A	Del_15q11.2	0.26	1
LRP1B	Del_9p21.3	0.26	1
PRKCG	17p-Del	0.26	1
ABCB1	KEAP1	0.261	1
ADAMTS19	5q-Del	0.261	1
CACNA1F	EGFR	0.261	1
CACNA1F	8q-Amp	0.261	1
DNMT3A	PDGFRA	0.261	1
MET	19p-Del	0.261	1
MET	Del_1p13.1	0.261	1
SLAMF9	9p-Del	0.261	1
20q-Amp	Del_1p13.1	0.261	1
MAP2	Del_21q11.2	0.262	1
NLGN4X	SRPX	0.262	1
NLGN4X	WT1	0.262	1
NLGN4X	8p-Del	0.262	1
SRPX	Del_13q34	0.262	1
GAGE2A	Amp_7p11.2	0.263	1
LRP1B	Del_11q23.1	0.263	1
NFE2L2	PAPPA2	0.263	1
PTPRU	Amp_8q24.21	0.263	1
STRA8	Amp_7p11.2	0.263	1
Amp_8q24.21	Del_11p15.5	0.263	1
MAP2	3q-Del	0.264	1
MAP2	Del_3q11.1	0.264	1
MMP16	Amp_1p34.3	0.264	1
NLRP6	1q-Amp	0.264	1
ACVR1B	8q-Amp	0.265	1
ACVR1B	Del_18q21.32	0.265	1
EGFR	PAK1	0.265	1
EGFR	STIM1	0.265	1
EGFR	ZNF608	0.265	1
CSMD3	19q-Del	0.266	1
CSMD3	21q-Del	0.266	1
TPTE	9q-Del	0.266	1
ADAMTS19	Del_19p13.2	0.267	1
EPHB1	Amp_11q13.3	0.267	1
Amp_11q13.3	Amp_19q12	0.267	1
ARID1A	Amp_20q13.33	0.268	1
PAPPA2	Del_15q15.1	0.268	1
18p-Del	Del_14q32.33	0.268	1
PTPRU	RBM10	0.269	1
RBM10	SMAD4	0.269	1
RBM10	15q-Del	0.269	1
RBM10	Del_11p15.5	0.269	1
SLC4A3	9q-Del	0.269	1
7q-Amp	Del_5q31.1	0.269	1
CDKN2A	Del_5q31.1	0.27	1
CDKN2A	Del_15q15.1	0.27	1
EGFR	PTPRU	0.27	1
EGFR	SLC4A3	0.27	1
EGFR	TRERF1	0.27	1
EPHA5	17p-Del	0.27	1
LRP1B	NLRP6	0.27	1
LRP1B	RB1	0.27	1
LRP1B	Amp_18q11.2	0.27	1
PTPRU	8q-Amp	0.27	1
SMAD4	8q-Amp	0.27	1
SMARCA4	Del_8p23.2	0.27	1
17q-Amp	Del_15q15.1	0.27	1
ACVR1B	Amp_8q24.21	0.271	1
ACVR1B	Del_6q26	0.271	1
ACVR1B	Del_18q23	0.271	1
ARID2	Amp_14q13.3	0.271	1
ATM	TGFBR3	0.271	1
PAK1	Del_18q23	0.271	1
STIM1	Del_6q26	0.271	1
TPTE	U2AF1	0.271	1
CACNA1F	Del_6q26	0.272	1
NFE2L2	Amp_6p21.1	0.272	1
PAPPA2	Del_19q13.33	0.272	1
TCEAL5	Amp_12q15	0.272	1
Amp_12q15	Amp_13q33.3	0.272	1
ATM	Del_12p13.2	0.273	1
BRAF	Amp_1p34.3	0.273	1
BRAF	Amp_4q12	0.273	1
FCRLA	MGA	0.273	1
NF1	Del_19p13.3	0.273	1
3q-Del	Amp_3q26.2	0.273	1
Amp_7p11.2	Amp_17q12	0.273	1
20q-Amp	13q-Del	0.274	1
CTNNB1	Del_9p21.3	0.275	1
KEAP1	Amp_14q13.3	0.275	1
NLGN4X	Del_18q21.32	0.275	1
OR2L13	Amp_6p21.1	0.275	1
OR2L13	Amp_12q15	0.275	1
TP53	Amp_12q14.1	0.275	1
ARID1A	BRAF	0.276	1
BRAF	Del_21q11.2	0.276	1
ERBB2	KRAS	0.276	1
LRP1B	19p-Del	0.276	1
SETD2	Amp_3q26.2	0.276	1
CSMD3	Del_9p21.3	0.277	1
EGFR	1q-Amp	0.277	1
PAK1	TTN	0.277	1
Amp_6p21.1	Del_13q12.11	0.277	1
Amp_12q15	Del_17p13.3	0.277	1
PIK3CA	Del_9p21.3	0.278	1
APC	19p-Del	0.279	1
NF1	Del_19p13.2	0.279	1
NLGN4X	Del_10p15.3	0.279	1
ROBO2	Amp_3q26.2	0.279	1
ABCB1	Del_1p13.1	0.28	1
MAP2	19p-Del	0.28	1
MET	NF1	0.28	1
PIK3CA	Amp_8p11.21	0.28	1
TCEAL5	Amp_12q14.1	0.28	1
PDGFRA	SMAD4	0.281	1
PDGFRA	15q-Del	0.281	1
PTPRU	7q-Amp	0.281	1
SMAD4	ZEB1	0.281	1
SMARCA4	Amp_6p21.1	0.281	1
ZEB1	Del_11p15.5	0.281	1
NF1	Del_19q13.33	0.282	1
TCEAL5	5p-Amp	0.282	1
ACVR1B	Del_17p13.3	0.283	1
EPHB1	9q-Del	0.283	1
EPHB1	Del_6q26	0.283	1
FCRLA	17p-Del	0.283	1
RBM10	Amp_19q12	0.283	1
ROBO2	Del_19p13.3	0.283	1
SMARCA4	1q-Amp	0.283	1
SMARCA4	Amp_1p34.3	0.283	1
STIM1	Del_13q12.11	0.283	1
KRAS	PTPRU	0.284	1
LRP1B	Del_3p21.31	0.284	1
RB1	Amp_10p15.1	0.284	1
6q-Del	Del_2q22.1	0.284	1
CSMD3	ERBB2	0.285	1
DNMT3A	SETD2	0.285	1
DNMT3A	Amp_Xq28	0.285	1
ERBB2	Del_19p13.3	0.285	1
U2AF1	Del_19p13.3	0.285	1
BRAF	KEAP1	0.286	1
EGFR	OR2L13	0.286	1
EGFR	Del_11q25	0.286	1
LRP1B	17p-Del	0.286	1
PIK3CA	Del_19p13.2	0.286	1
Amp_17q12	Del_15q15.1	0.286	1
CACNA1F	20q-Amp	0.287	1
MET	Del_10p15.3	0.287	1
NF1	Del_6q14.3	0.287	1
OR2L13	Amp_12q14.1	0.287	1
ROBO2	Del_11q25	0.287	1
ABCB1	WDR66	0.289	1
CSMD3	Del_10p15.3	0.289	1
MMP16	21q-Del	0.289	1
NLGN4X	Del_18q23	0.289	1
PAK1	Amp_8p11.21	0.289	1
RBM10	Amp_5p13.1	0.289	1
SETD2	Amp_8q24.21	0.289	1
TCEAL5	Del_13q34	0.289	1
ZNF608	Amp_8p11.21	0.289	1
CDKN2A	Amp_19q12	0.29	1
CDKN2A	Del_3p21.31	0.29	1
CDKN2A	Del_5q12.1	0.29	1
PIK3CA	Del_9p23	0.29	1
RBM10	Del_1p36.13	0.29	1
SMARCA4	Del_3p26.2	0.29	1
APC	Del_12p13.2	0.292	1
PIK3CA	Del_3q29	0.292	1
PTPRU	Amp_17q12	0.292	1
RBM10	Del_19p13.3	0.292	1
SMAD4	Amp_17q12	0.292	1
SMAD4	Del_19q13.33	0.292	1
19p-Del	Amp_14q13.3	0.292	1
CACNA1F	Del_17p13.3	0.293	1
EPHA3	Del_19p13.2	0.293	1
EPHB1	Amp_12p12.1	0.293	1
FCRLA	Del_5q31.1	0.293	1
FCRLA	Del_15q15.1	0.293	1
NLRP5	3q-Del	0.293	1
NLRP5	Del_3q11.1	0.293	1
TGFBR3	Del_9p21.3	0.293	1
8q-Amp	8p-Del	0.293	1
Amp_12p12.1	Amp_19q12	0.293	1
BRAF	19p-Del	0.294	1
FTSJD1	18q-Del	0.294	1
KEAP1	5p-Amp	0.294	1
DNMT3A	5p-Amp	0.296	1
Amp_20q13.33	Del_9p21.3	0.296	1
KRAS	Amp_6p21.1	0.297	1
RB1	Del_6q26	0.297	1
RB1	Del_18q23	0.297	1
ROBO2	Del_13q12.11	0.297	1
SMARCA4	Amp_8q24.21	0.297	1
SMARCA4	Amp_12q14.1	0.297	1
TP53	Del_11q25	0.297	1
17p-Del	Amp_8q24.21	0.297	1
17p-Del	Amp_12q14.1	0.297	1
ATM	NFE2L2	0.298	1
ATM	TCEAL5	0.298	1
18q-Del	Amp_20q13.33	0.298	1
ABCB1	13q-Del	0.299	1
BRAF	SRPX	0.299	1
BRAF	21q-Del	0.299	1
CSMD3	Amp_12q15	0.299	1
FAM65C	Del_9q21.11	0.299	1
MAP2	PIK3CA	0.299	1
MGA	WT1	0.299	1
MMP16	PIK3CA	0.299	1
SETD2	Amp_7p11.2	0.299	1
STK11	Del_17p13.3	0.299	1
ZEB1	Amp_19q12	0.299	1
ZEB1	Del_3p21.31	0.299	1
ZEB1	Del_5q12.1	0.299	1
Amp_7q31.2	Del_4q34.3	0.299	1
KRAS	Del_8p23.2	0.3	1
RB1	Del_13q34	0.3	1
TTN	Del_16q24.3	0.3	1
CDKN2A	Del_16q23.1	0.301	1
EGFR	Del_1p36.13	0.301	1
ERBB2	TTN	0.301	1
PHKA1	Amp_12q15	0.301	1
PRKCG	Del_6q14.3	0.301	1
SLAMF9	Amp_12q15	0.301	1
20q-Amp	Del_11q25	0.301	1
GAGE2A	8p-Del	0.302	1
RIT1	8p-Del	0.302	1
STIM1	1q-Amp	0.302	1
1q-Amp	Del_12q12	0.302	1
NUDT11	Del_8p23.2	0.303	1
PIK3CA	1q-Amp	0.303	1
DNMT3A	7p-Amp	0.304	1
DNMT3A	Amp_20q13.33	0.304	1
NLRP5	SETD2	0.304	1
NLRP5	Del_3p26.2	0.304	1
PAPPA2	Del_6q26	0.304	1
SETD2	Del_15q15.1	0.304	1
SETD2	Del_16q24.3	0.304	1
TP53	21q-Del	0.304	1
Amp_7p11.2	Del_3q11.1	0.304	1
Amp_14q13.3	Del_Xp22.2	0.304	1
CACNA1F	Amp_8p11.21	0.305	1
SETD2	15q-Del	0.305	1
SRPX	Amp_5p15.33	0.305	1
TPTE	Del_12q24.33	0.305	1
TRERF1	Del_21q11.2	0.305	1
CSMD3	9p-Del	0.306	1
EPHA5	Amp_12q15	0.306	1
PAPPA2	PHKA1	0.306	1
ROBO2	Amp_7p11.2	0.307	1
TCEAL5	Del_19p13.2	0.307	1
Amp_13q33.3	Del_19p13.2	0.307	1
ADAMTS19	17p-Del	0.308	1
EGFR	RIT1	0.308	1
EPHB1	6q-Del	0.308	1
ERBB2	Amp_12p12.1	0.308	1
FAM65C	SMARCA4	0.308	1
FAM65C	17p-Del	0.308	1
G3BP1	8q-Amp	0.308	1
GAGE2A	Del_18q21.32	0.308	1
RPL5	Del_18q21.32	0.308	1
SMARCA4	21q-Del	0.308	1
SMARCA4	Del_1p13.1	0.308	1
STRA8	Del_18q21.32	0.308	1
TPTE	Del_19q13.33	0.308	1
6q-Del	Amp_19q12	0.308	1
ACVR1B	7p-Amp	0.309	1
PAPPA2	15q-Del	0.309	1
PPP3CA	ROBO2	0.309	1
SLAMF9	Amp_12q14.1	0.309	1
STIM1	Amp_20q13.33	0.309	1
Amp_8q24.21	Del_9p21.3	0.309	1
DNMT3A	PIK3CA	0.31	1
EGFR	8q-Amp	0.31	1
EGFR	Del_18q21.32	0.31	1
ATM	MGA	0.311	1
ATM	Del_9q21.11	0.311	1
KRAS	SRPX	0.311	1
SRPX	STK11	0.311	1
STK11	13q-Del	0.311	1
STK11	Del_12p13.2	0.311	1
TTN	Del_9p23	0.311	1
ZNF608	Del_9p21.3	0.311	1
NLGN4X	17p-Del	0.312	1
PRKCG	9q-Del	0.312	1
RBM10	20p-Amp	0.312	1
7p-Amp	Del_6q26	0.312	1
Amp_20q13.33	Del_18q23	0.312	1
ATM	RB1	0.313	1
EGFR	GNAS	0.313	1
GNAS	8q-Amp	0.313	1
PIK3CA	Amp_17q23.1	0.313	1
PIK3CA	Del_9q21.11	0.313	1
7q-Amp	Del_19p13.3	0.313	1
EPHB1	3q-Del	0.314	1
EPHB1	Del_3q11.1	0.314	1
FCRLA	Amp_7q31.2	0.314	1
FTSJD1	Del_10q26.3	0.314	1
GAGE2A	Del_18q23	0.314	1
3q-Del	Amp_7q31.2	0.314	1
EPHA5	SMAD4	0.315	1
EPHA5	TRERF1	0.315	1
NLRP5	ROBO2	0.315	1
PIK3CA	7p-Amp	0.315	1
RBM10	9q-Del	0.315	1
ROBO2	Del_15q15.1	0.315	1
ZEB1	Amp_11q13.3	0.315	1
ZEB1	Del_16q23.1	0.315	1
ABCB1	NFE2L2	0.316	1
ERBB2	6q-Del	0.316	1
MMP16	TCEAL5	0.316	1
ADAMTS19	15q-Del	0.317	1
EPHB1	Del_19q13.33	0.317	1
KEAP1	Del_13q12.11	0.317	1
RIT1	Amp_1q21.3	0.317	1
ABCB1	Del_9p21.3	0.318	1
EPHA3	Del_18q21.32	0.318	1
KRAS	Amp_17q12	0.318	1
MAP2	Del_9p21.3	0.318	1
MET	Del_8p23.2	0.318	1
NLGN4X	Del_17p13.3	0.318	1
NLRP5	19q-Del	0.318	1
WT1	Del_15q15.1	0.318	1
3p-Del	Amp_12q15	0.318	1
5q-Del	Amp_8q24.21	0.318	1
ABCB1	22q-Del	0.319	1
ABCB1	Del_10p15.3	0.319	1
APC	18p-Del	0.319	1
CACNA1F	Del_9p23	0.319	1
MMP16	Del_10p15.3	0.319	1
NF1	Del_9q21.11	0.319	1
STK11	Amp_8p11.21	0.319	1
TTN	18p-Del	0.319	1
Amp_7p11.2	Del_10q26.3	0.319	1
KRAS	Del_19p13.3	0.32	1
KRAS	NRAS	0.322	1
Amp_8p11.21	Amp_19q12	0.322	1
CDKN2A	PDGFRA	0.324	1
DNMT3A	22q-Del	0.324	1
PIK3CA	Amp_14q13.3	0.324	1
ZEB1	20p-Amp	0.324	1
ZEB1	Amp_22q11.22	0.324	1
17q-Amp	Del_4q34.3	0.324	1
FCRLA	Amp_11q13.3	0.325	1
ABCB1	8p-Del	0.326	1
EPHA3	RB1	0.326	1
EPHA3	18p-Del	0.326	1
EPHA3	Amp_18q11.2	0.326	1
EPHA3	Del_11q25	0.326	1
G3BP1	Del_13q12.11	0.326	1
GAGE2A	Del_13q12.11	0.326	1
GAGE2A	Del_17p13.3	0.326	1
LRP1B	Del_9p23	0.326	1
MGA	NFE2L2	0.326	1
NF1	Amp_14q13.3	0.326	1
NFE2L2	Amp_3q26.2	0.326	1
NFE2L2	Amp_17q23.1	0.326	1
NFE2L2	Del_9q21.11	0.326	1
RPL5	Del_17p13.3	0.326	1
STRA8	Del_17p13.3	0.326	1
TCEAL5	Del_9q21.11	0.326	1
ZEB1	9p-Del	0.326	1
7q-Amp	9p-Del	0.326	1
19p-Del	Amp_7p11.2	0.326	1
Amp_7p11.2	Del_18q23	0.326	1
ATM	PHKA1	0.327	1
ATM	5p-Amp	0.327	1
NF1	Amp_12p12.1	0.327	1
CXCR7	9p-Del	0.328	1
CXCR7	Del_22q13.32	0.328	1
LRP1B	Amp_7p11.2	0.328	1
PIK3CA	SMARCA4	0.328	1
SMARCA4	13q-Del	0.328	1
TPTE	Del_6q14.3	0.328	1
18q-Del	Amp_11q13.3	0.328	1
ATM	17p-Del	0.329	1
CSMD3	NUDT11	0.329	1
ERBB2	Amp_14q13.3	0.329	1
ACVR1B	NF1	0.33	1
ARID1A	TPTE	0.33	1
TPTE	Del_3p26.2	0.33	1
TPTE	Del_21q11.2	0.33	1
6q-Del	Amp_12q15	0.33	1
Amp_7p11.2	Del_13q34	0.33	1
Amp_10p15.1	Del_Xp22.2	0.33	1
ARID2	20q-Amp	0.331	1
ARID2	8p-Del	0.331	1
EGFR	5p-Amp	0.331	1
FTSJD1	20q-Amp	0.331	1
FTSJD1	8p-Del	0.331	1
FTSJD1	Amp_12q14.1	0.331	1
GNAS	KEAP1	0.331	1
MET	3p-Del	0.331	1
PIK3CA	SMAD4	0.331	1
PIK3CA	15q-Del	0.331	1
PIK3CA	Del_11p15.5	0.331	1
SLC4A3	13q-Del	0.331	1
SMAD4	Del_12p13.2	0.331	1
18p-Del	Amp_8p11.21	0.331	1
PDGFRA	9q-Del	0.332	1
SMARCA4	Del_6q14.3	0.332	1
STK11	Del_16q23.1	0.332	1
Amp_11q13.3	Del_17p13.3	0.332	1
ARID1A	5p-Amp	0.333	1
BRAF	Del_10p15.3	0.333	1
CACNA1F	Amp_17q23.1	0.333	1
CACNA1F	Del_9q21.11	0.333	1
CDKN2A	Amp_1q21.3	0.333	1
ERBB2	Amp_6p21.1	0.333	1
MET	9p-Del	0.333	1
NLGN4X	Amp_8p11.21	0.333	1
NUDT11	Amp_14q13.3	0.333	1
RIT1	Amp_8p11.21	0.333	1
SETD2	5p-Amp	0.333	1
5p-Amp	Del_21q11.2	0.333	1
Amp_11q13.3	Del_19q13.33	0.333	1
APC	Amp_1q21.3	0.334	1
GNAS	Del_3q29	0.334	1
SMAD4	Amp_20q13.33	0.334	1
CTNNB1	NF1	0.335	1
EGFR	PRKCG	0.335	1
EGFR	17q-Amp	0.335	1
EGFR	Amp_22q11.22	0.335	1
EPHB1	Amp_Xq28	0.335	1
CDKN2A	Amp_17q12	0.336	1
FCRLA	RBM10	0.336	1
NFE2L2	17p-Del	0.336	1
NFE2L2	Del_15q11.2	0.336	1
PRKCG	Del_19q13.33	0.336	1
RBM10	3q-Del	0.336	1
RBM10	Amp_1p34.3	0.336	1
RBM10	Del_3q11.1	0.336	1
RBM10	Del_9p23	0.336	1
TCEAL5	17p-Del	0.336	1
TCEAL5	Del_15q11.2	0.336	1
TTN	3q-Del	0.336	1
17q-Amp	Del_19q13.33	0.336	1
20p-Amp	Amp_17q12	0.336	1
20p-Amp	Del_19q13.33	0.336	1
GAGE2A	Amp_8q24.21	0.337	1
RIT1	Amp_8q24.21	0.337	1
CTNNB1	OR2L13	0.338	1
CTNNB1	RB1	0.338	1
CTNNB1	Amp_18q11.2	0.338	1
DNMT3A	RB1	0.338	1
DNMT3A	18p-Del	0.338	1
EPHB1	Amp_12q15	0.338	1
NFE2L2	Del_9p23	0.338	1
TCEAL5	Del_9p23	0.338	1
Amp_12q15	Amp_19q12	0.338	1
ADAMTS19	Del_1p36.13	0.339	1
ATM	Del_17p13.3	0.339	1
EPHA5	RPL5	0.339	1
KEAP1	Del_16q24.3	0.339	1
PAPPA2	Del_9p23	0.339	1
Amp_10p15.1	Del_9p21.3	0.339	1
ABCB1	18p-Del	0.34	1
EPHA3	Del_19p13.3	0.34	1
EPHB1	Del_4q22.1	0.34	1
FAM65C	Amp_7q31.2	0.34	1
FAM65C	Amp_19q12	0.34	1
MAP2	RB1	0.34	1
MMP16	18p-Del	0.34	1
NF1	17p-Del	0.34	1
CACNA1F	STK11	0.341	1
ERBB2	ROBO2	0.342	1
FAM65C	Amp_7p11.2	0.342	1
FTSJD1	Del_18q21.32	0.342	1
PIK3CA	Del_16q24.3	0.342	1
ROBO2	U2AF1	0.342	1
WT1	Amp_7p11.2	0.342	1
Amp_12q15	Del_6q14.3	0.342	1
CXCR7	Amp_12p12.1	0.343	1
Amp_12p12.1	Del_12q24.33	0.343	1
ARID2	Del_13q34	0.344	1
SLC4A3	22q-Del	0.344	1
SMAD4	22q-Del	0.344	1
STIM1	TPTE	0.344	1
TPTE	Del_12q12	0.344	1
9p-Del	Amp_5p15.33	0.344	1
CSMD3	STK11	0.345	1
CXCR7	KRAS	0.345	1
MAP2	MGA	0.345	1
ABCB1	Del_2q22.1	0.346	1
MAP2	PHKA1	0.346	1
MAP2	PPP3CA	0.346	1
MMP16	Del_2q22.1	0.346	1
NFE2L2	NLRP5	0.346	1
NFE2L2	Del_15q15.1	0.346	1
RIT1	1q-Amp	0.346	1
STRA8	1q-Amp	0.346	1
TCEAL5	Del_5q31.1	0.346	1
TCEAL5	Del_15q15.1	0.346	1
TCEAL5	Del_16q24.3	0.346	1
EPHA5	Del_1p36.13	0.347	1
KRAS	Del_15q15.1	0.347	1
LRP1B	PAK1	0.347	1
LRP1B	ZNF608	0.347	1
MET	Del_11q23.1	0.347	1
MET	Del_14q32.33	0.347	1
20q-Amp	Del_11q23.1	0.347	1
APC	STK11	0.348	1
ARID1A	20p-Amp	0.348	1
ATM	Del_5q31.1	0.348	1
CACNA1F	SMARCA4	0.348	1
CDKN2A	SETD2	0.348	1
CDKN2A	Del_3p26.2	0.348	1
CDKN2A	Del_21q11.2	0.348	1
FCRLA	PDGFRA	0.348	1
FCRLA	7q-Amp	0.348	1
PDGFRA	Amp_1p34.3	0.348	1
PDGFRA	Amp_4q12	0.348	1
SETD2	20p-Amp	0.348	1
SETD2	Amp_22q11.22	0.348	1
20p-Amp	Amp_Xq28	0.348	1
20p-Amp	Del_21q11.2	0.348	1
EPHB1	1q-Amp	0.349	1
FTSJD1	Del_3q29	0.349	1
PDGFRA	ZEB1	0.349	1
1q-Amp	Amp_19q12	0.349	1
7q-Amp	Del_4q34.3	0.349	1
ERBB2	NLGN4X	0.35	1
ERBB2	Del_13q34	0.35	1
RB1	Del_9p23	0.35	1
RBM10	Amp_17q12	0.35	1
NLGN4X	Amp_12p12.1	0.351	1
SETD2	Amp_11q13.3	0.351	1
STK11	8p-Del	0.351	1
WT1	Amp_11q13.3	0.351	1
Amp_3q26.2	Del_9p21.3	0.351	1
CXCR7	18q-Del	0.352	1
G3BP1	7p-Amp	0.352	1
GAGE2A	7p-Amp	0.352	1
GAGE2A	Amp_20q13.33	0.352	1
RIT1	Amp_20q13.33	0.352	1
STRA8	7p-Amp	0.352	1
5q-Del	Amp_7p11.2	0.352	1
ARID1A	Amp_5p15.33	0.353	1
ARID2	Del_18q23	0.353	1
NLGN4X	Amp_1q21.3	0.353	1
STK11	Amp_13q33.3	0.353	1
BRAF	RB1	0.354	1
BRAF	Amp_18q11.2	0.354	1
EPHB1	19p-Del	0.354	1
PAPPA2	Amp_11q13.3	0.354	1
Amp_12q14.1	Amp_19q12	0.354	1
PAPPA2	U2AF1	0.355	1
PDGFRA	Amp_12p12.1	0.355	1
RB1	1q-Amp	0.355	1
TP53	Amp_20q13.33	0.355	1
ZEB1	Del_6q26	0.355	1
1q-Amp	Del_11q25	0.355	1
7q-Amp	Del_6q26	0.355	1
7q-Amp	Del_18q23	0.355	1
BRAF	Del_2q22.1	0.356	1
MGA	PPP3CA	0.356	1
PIK3CA	Amp_7p11.2	0.356	1
RBM10	Del_13q12.11	0.357	1
ACVR1B	Del_19p13.3	0.359	1
APC	Del_8p23.2	0.359	1
EGFR	6q-Del	0.359	1
KEAP1	SMAD4	0.359	1
RB1	SLC4A3	0.359	1
RB1	TRERF1	0.359	1
SMAD4	Del_11q25	0.359	1
TRERF1	Del_11q25	0.359	1
15q-Del	Amp_18q11.2	0.359	1
ABCB1	Del_19p13.3	0.36	1
APC	Del_22q13.32	0.36	1
FCRLA	Amp_17q12	0.36	1
MAP2	Del_19p13.3	0.36	1
MMP16	Del_19p13.3	0.36	1
STK11	9q-Del	0.36	1
3q-Del	Amp_17q12	0.36	1
Amp_17q12	Del_3q11.1	0.36	1
ABCB1	Del_8p23.2	0.361	1
APC	KRAS	0.361	1
20p-Amp	19p-Del	0.361	1
CDKN2A	Del_13q12.11	0.362	1
EPHA3	Del_17p13.3	0.362	1
PRKCG	Del_17p13.3	0.362	1
RBM10	WDR66	0.362	1
RBM10	19q-Del	0.362	1
RBM10	Del_4q22.1	0.362	1
ABCB1	17p-Del	0.363	1
BRAF	Amp_3q26.2	0.363	1
CACNA1F	Del_15q15.1	0.363	1
CACNA1F	Del_16q24.3	0.363	1
KRAS	Del_3p26.2	0.363	1
NLRP5	Del_10p15.3	0.363	1
BRAF	8q-Amp	0.364	1
EGFR	Del_9q21.11	0.364	1
LRP1B	3q-Del	0.364	1
LRP1B	8p-Del	0.364	1
LRP1B	Amp_1p34.3	0.364	1
MET	Amp_10p15.1	0.364	1
MGA	Del_18q21.32	0.364	1
7p-Amp	Del_5q12.1	0.364	1
Amp_7p11.2	Del_6q14.3	0.364	1
APC	Del_14q32.33	0.365	1
CSMD3	Del_9p23	0.365	1
NUDT11	5p-Amp	0.365	1
TCEAL5	Amp_5p13.1	0.365	1
7q-Amp	Del_9p23	0.365	1
Del_3q29	Del_Xp22.2	0.365	1
CACNA1F	Del_1p36.13	0.366	1
PPP3CA	Del_15q11.2	0.366	1
SLAMF9	17p-Del	0.366	1
17p-Del	Del_2q22.1	0.366	1
Del_2q22.1	Del_15q11.2	0.366	1
ACVR1B	9p-Del	0.367	1
ACVR1B	Del_22q13.32	0.367	1
KCNQ5	9p-Del	0.367	1
NFE2L2	Amp_7q31.2	0.367	1
NFE2L2	Amp_19q12	0.367	1
NFE2L2	Del_3p21.31	0.367	1
NFE2L2	Del_5q12.1	0.367	1
PAK1	Del_22q13.32	0.367	1
PDGFRA	Del_19q13.33	0.367	1
RBM10	Amp_5p15.33	0.367	1
SETD2	Del_9p21.3	0.367	1
STIM1	9p-Del	0.367	1
TCEAL5	Del_5q12.1	0.367	1
ZNF608	9p-Del	0.367	1
18p-Del	Amp_20q13.33	0.367	1
9q-Del	Amp_5p15.33	0.367	1
Amp_17q12	Del_4q34.3	0.367	1
Amp_20q13.33	Del_1p36.13	0.367	1
LRP1B	15q-Del	0.368	1
NLGN4X	Del_11q23.1	0.368	1
NLRP6	Amp_12q15	0.368	1
RBM10	Del_21q11.2	0.368	1
1p-Amp	Amp_12q15	0.368	1
20q-Amp	18q-Del	0.368	1
20q-Amp	6q-Del	0.368	1
3p-Del	Amp_8q24.21	0.368	1
9q-Del	Amp_Xq28	0.368	1
ARID2	CTNNB1	0.369	1
CTNNB1	3p-Del	0.369	1
EGFR	Del_19q13.33	0.369	1
EPHA3	ERBB2	0.369	1
ERBB2	Del_19p13.2	0.369	1
SMARCA4	18p-Del	0.369	1
U2AF1	Del_19p13.2	0.369	1
8q-Amp	Del_19q13.33	0.369	1
PDGFRA	6q-Del	0.37	1
CSMD3	1p-Amp	0.371	1
CSMD3	Del_12q24.33	0.371	1
EGFR	FCRLA	0.371	1
EGFR	3q-Del	0.371	1
8q-Amp	Del_3q11.1	0.371	1
Amp_1p34.3	Del_18q21.32	0.371	1
ARID1A	Del_22q13.32	0.372	1
EGFR	Del_11q23.1	0.372	1
EGFR	Del_14q32.33	0.372	1
LRP1B	Amp_12q15	0.372	1
MGA	PAPPA2	0.372	1
PAPPA2	Amp_3q26.2	0.372	1
STK11	18p-Del	0.372	1
TTN	5q-Del	0.372	1
TTN	Del_9p21.3	0.372	1
ZEB1	Amp_14q13.3	0.372	1
9p-Del	Amp_Xq28	0.372	1
ARID1A	Amp_1p34.3	0.373	1
FCRLA	SETD2	0.373	1
FCRLA	Del_21q11.2	0.373	1
G3BP1	NF1	0.373	1
NF1	RIT1	0.373	1
SETD2	Amp_1p34.3	0.373	1
1q-Amp	Del_16q23.1	0.373	1
Amp_1p34.3	Amp_Xq28	0.373	1
Amp_4q12	Del_21q11.2	0.373	1
ADAMTS19	Del_6q14.3	0.374	1
EPHB1	13q-Del	0.374	1
FAM65C	7q-Amp	0.374	1
PDGFRA	SRPX	0.374	1
PDGFRA	19q-Del	0.374	1
PDGFRA	21q-Del	0.374	1
PDGFRA	Del_4q22.1	0.374	1
PIK3CA	Amp_7q31.2	0.374	1
PIK3CA	Amp_19q12	0.374	1
ROBO2	Amp_11q13.3	0.374	1
SRPX	ZEB1	0.374	1
WDR66	ZEB1	0.374	1
ZEB1	19q-Del	0.374	1
ZEB1	Del_4q22.1	0.374	1
7q-Amp	21q-Del	0.374	1
CDKN2A	13q-Del	0.375	1
PIK3CA	PRKCG	0.375	1
PIK3CA	17q-Amp	0.375	1
PRKCG	13q-Del	0.375	1
TGFBR3	Del_6q14.3	0.375	1
WT1	Del_6q14.3	0.375	1
20p-Amp	Del_12p13.2	0.375	1
ARID2	Del_13q12.11	0.376	1
FTSJD1	Del_13q12.11	0.376	1
KRAS	NFE2L2	0.376	1
MGA	STK11	0.376	1
PPP3CA	Del_15q15.1	0.376	1
MAP2	Del_22q13.32	0.377	1
NLRP6	ROBO2	0.377	1
ROBO2	Del_12q24.33	0.377	1
Amp_20q13.33	Del_6q14.3	0.377	1
ERBB2	MAP2	0.378	1
ERBB2	MMP16	0.378	1
MAP2	U2AF1	0.378	1
NF1	22q-Del	0.378	1
NFE2L2	Del_16q23.1	0.378	1
TCEAL5	Del_16q23.1	0.378	1
TP53	Del_11q23.1	0.378	1
EMG1	KEAP1	0.379	1
EPHA5	9p-Del	0.379	1
PIK3CA	TPTE	0.379	1
RBM10	Amp_6p21.1	0.38	1
ROBO2	Amp_10p15.1	0.38	1
Amp_4q12	Del_18q23	0.38	1
ATM	Del_14q32.33	0.381	1
MET	5q-Del	0.381	1
MGA	SMARCA4	0.381	1
MGA	Del_19p13.3	0.381	1
NLGN4X	Amp_20q13.33	0.381	1
TTN	Del_11q23.1	0.381	1
17p-Del	Amp_3q26.2	0.381	1
ABCB1	Del_16q24.3	0.382	1
MAP2	Del_16q24.3	0.382	1
PDGFRA	Del_13q12.11	0.382	1
ZEB1	Del_13q12.11	0.382	1
ACVR1B	Amp_12p12.1	0.383	1
KCNQ5	Amp_12p12.1	0.383	1
STIM1	Amp_12p12.1	0.383	1
18p-Del	Amp_5p13.1	0.383	1
Amp_12p12.1	Del_12q12	0.383	1
NLRP5	OR2L13	0.384	1
NLRP6	Amp_14q13.3	0.384	1
Amp_12p12.1	Del_3q29	0.384	1
Amp_14q13.3	Del_12q24.33	0.384	1
Amp_18q11.2	Del_15q15.1	0.384	1
ADAMTS19	Amp_1p34.3	0.385	1
ADAMTS19	Amp_4q12	0.385	1
ADAMTS19	Del_3q11.1	0.385	1
CSMD3	9q-Del	0.385	1
DNMT3A	Del_Xp22.2	0.385	1
FCRLA	19p-Del	0.385	1
FCRLA	Del_1p13.1	0.385	1
Amp_4q12	Del_1p13.1	0.385	1
ABCB1	Del_17p13.3	0.386	1
ARID1A	ZEB1	0.386	1
CXCR7	NLGN4X	0.386	1
FAM65C	Del_19q13.33	0.386	1
MMP16	Del_13q12.11	0.386	1
NLGN4X	1p-Amp	0.386	1
NLRP6	Del_13q34	0.386	1
PAPPA2	RBM10	0.386	1
SETD2	Del_4q34.3	0.386	1
SRPX	Del_19q13.33	0.386	1
ZEB1	Del_3p26.2	0.386	1
22q-Del	Amp_7p11.2	0.386	1
ATM	Amp_19q12	0.387	1
ARID2	Amp_8p11.21	0.388	1
CACNA1F	17q-Amp	0.388	1
CACNA1F	20p-Amp	0.388	1
CDKN2A	22q-Del	0.388	1
ERBB2	Amp_3q26.2	0.388	1
G3BP1	TPTE	0.388	1
MGA	U2AF1	0.388	1
PAPPA2	Amp_12q14.1	0.388	1
PRKCG	22q-Del	0.388	1
RBM10	19p-Del	0.388	1
RBM10	Del_1p13.1	0.388	1
U2AF1	Del_9q21.11	0.388	1
17q-Amp	22q-Del	0.388	1
17q-Amp	Del_10p15.3	0.388	1
20p-Amp	22q-Del	0.388	1
ARID2	15q-Del	0.389	1
ARID2	Del_11p15.5	0.389	1
CSMD3	Amp_1p34.3	0.389	1
DNMT3A	9p-Del	0.389	1
DNMT3A	Del_22q13.32	0.389	1
FCRLA	Amp_1q21.3	0.389	1
FTSJD1	SLC4A3	0.389	1
KEAP1	TPTE	0.389	1
TRERF1	3p-Del	0.389	1
NFE2L2	RBM10	0.39	1
NFE2L2	9q-Del	0.39	1
NLGN4X	Del_6q14.3	0.39	1
STK11	7q-Amp	0.39	1
ACVR1B	18q-Del	0.391	1
ACVR1B	6q-Del	0.391	1
CDKN2A	1q-Amp	0.391	1
EPHA3	Amp_12p12.1	0.391	1
PAK1	18q-Del	0.391	1
STIM1	6q-Del	0.391	1
ZNF608	18q-Del	0.391	1
ZNF608	6q-Del	0.391	1
Amp_12p12.1	Del_19p13.2	0.391	1
Amp_5p13.1	Del_1p36.13	0.392	1
CSMD3	Del_13q34	0.393	1
20q-Amp	Del_6q14.3	0.394	1
5p-Amp	Del_19p13.3	0.394	1
ATM	CXCR7	0.395	1
ATM	1p-Amp	0.395	1
EPHA3	Del_11q23.1	0.395	1
EPHA3	Del_14q32.33	0.395	1
G3BP1	Amp_5p13.1	0.395	1
GAGE2A	Amp_5p13.1	0.395	1
GNAS	Amp_20q13.33	0.395	1
KRAS	Del_13q12.11	0.395	1
OR2L13	Amp_14q13.3	0.395	1
22q-Del	Amp_7q31.2	0.395	1
APC	6q-Del	0.396	1
ERBB2	KEAP1	0.396	1
PDGFRA	Amp_8p11.21	0.396	1
ZEB1	Amp_8p11.21	0.396	1
ARID1A	8q-Amp	0.397	1
EGFR	Amp_Xq28	0.397	1
EPHB1	Del_2q22.1	0.397	1
NF1	Del_1p36.13	0.397	1
PPP3CA	Amp_19q12	0.397	1
8q-Amp	Del_3p26.2	0.397	1
ARID1A	21q-Del	0.398	1
BRAF	Del_22q13.32	0.398	1
ERBB2	Del_15q11.2	0.398	1
FAM65C	Amp_Xq28	0.398	1
SETD2	TGFBR3	0.398	1
SETD2	19q-Del	0.398	1
SETD2	Del_4q22.1	0.398	1
SLAMF9	STK11	0.398	1
WDR66	Amp_Xq28	0.398	1
19q-Del	Amp_Xq28	0.398	1
9p-Del	Amp_3q26.2	0.398	1
Amp_Xq28	Del_4q22.1	0.398	1
FCRLA	PIK3CA	0.399	1
FCRLA	13q-Del	0.399	1
FCRLA	Del_13q12.11	0.399	1
FCRLA	Del_17p13.3	0.399	1
PIK3CA	5p-Amp	0.399	1
PIK3CA	3q-Del	0.399	1
PIK3CA	Del_3q11.1	0.399	1
ARID2	Del_9q21.11	0.4	1
CDKN2A	KRAS	0.4	1
FTSJD1	Amp_17q23.1	0.4	1
KRAS	PRKCG	0.4	1
KRAS	20p-Amp	0.4	1
MET	Del_3q29	0.4	1
BRAF	NLRP5	0.401	1
CDKN2A	7p-Amp	0.401	1
CTNNB1	Del_10q26.3	0.401	1
DNMT3A	Amp_10p15.1	0.401	1
KEAP1	Del_14q32.33	0.401	1
NFE2L2	ZEB1	0.401	1
NFE2L2	7q-Amp	0.401	1
PRKCG	7p-Amp	0.401	1
SETD2	Amp_12p12.1	0.401	1
ZNF608	Del_8p23.2	0.401	1
6q-Del	Amp_7p11.2	0.401	1
Amp_5p15.33	Del_1p13.1	0.401	1
KRAS	Del_9q21.11	0.402	1
ZEB1	Amp_12q15	0.402	1
7q-Amp	Amp_12q15	0.402	1
Amp_12q15	Del_4q34.3	0.402	1
ATM	Amp_20q13.33	0.403	1
CDKN2A	RB1	0.403	1
PRKCG	18p-Del	0.403	1
PRKCG	Del_11q25	0.403	1
RB1	17q-Amp	0.403	1
17q-Amp	18p-Del	0.403	1
20p-Amp	18p-Del	0.403	1
20p-Amp	Del_11q25	0.403	1
CXCR7	Del_19p13.2	0.404	1
EMG1	Del_9p23	0.404	1
EPHA3	1p-Amp	0.404	1
EPHA3	Del_3p21.31	0.404	1
EPHA3	Del_5q12.1	0.404	1
EPHB1	Del_19p13.2	0.404	1
NUDT11	Del_9p23	0.404	1
PIK3CA	Del_6q14.3	0.404	1
ROBO2	Amp_12q14.1	0.404	1
SETD2	Amp_17q12	0.404	1
SMARCA4	Del_18q23	0.404	1
STK11	17p-Del	0.404	1
STK19	Del_9p23	0.404	1
TTN	Del_1p13.1	0.404	1
1p-Amp	Del_19p13.2	0.404	1
Amp_10p15.1	Del_18q21.32	0.404	1
ADAMTS19	Del_4q34.3	0.405	1
EGFR	Amp_12q15	0.405	1
NLRP5	Del_9p23	0.405	1
SMAD4	Del_11q23.1	0.405	1
SMAD4	Del_Xp22.2	0.405	1
TPTE	22q-Del	0.405	1
TRERF1	Del_11q23.1	0.405	1
TRERF1	Del_Xp22.2	0.405	1
7q-Amp	19p-Del	0.405	1
NF1	18p-Del	0.406	1
5q-Del	Amp_12q14.1	0.406	1
Amp_14q13.3	Del_19q13.33	0.406	1
ACVR1B	Amp_6p21.1	0.407	1
ATM	Del_10q26.3	0.407	1
PAK1	Amp_6p21.1	0.407	1
PAK1	Amp_12q15	0.407	1
STIM1	Amp_6p21.1	0.407	1
STIM1	Amp_12q15	0.407	1
ZNF608	Amp_6p21.1	0.407	1
Amp_6p21.1	Del_12q12	0.407	1
EPHA3	6q-Del	0.408	1
ERBB2	Del_15q15.1	0.408	1
NFE2L2	TP53	0.408	1
PIK3CA	RBM10	0.408	1
RBM10	13q-Del	0.408	1
RBM10	Del_12p13.2	0.408	1
U2AF1	Del_5q31.1	0.408	1
U2AF1	Del_15q15.1	0.408	1
ABCB1	Del_11q23.1	0.409	1
ABCB1	Del_14q32.33	0.409	1
MAP2	Del_11q23.1	0.409	1
NF1	Del_3p21.31	0.409	1
PTPRU	Del_19p13.3	0.409	1
SMAD4	Del_19p13.3	0.409	1
EGFR	PAPPA2	0.41	1
EGFR	WDR66	0.41	1
EGFR	21q-Del	0.41	1
EGFR	Del_4q22.1	0.41	1
FAM65C	Del_18q21.32	0.41	1
FTSJD1	Del_1p36.13	0.41	1
G3BP1	Del_22q13.32	0.41	1
GAGE2A	9p-Del	0.41	1
GAGE2A	Del_22q13.32	0.41	1
NF1	Amp_12q14.1	0.41	1
PAPPA2	1p-Amp	0.41	1
PAPPA2	8q-Amp	0.41	1
RPL5	Del_22q13.32	0.41	1
SRPX	Del_18q21.32	0.41	1
TGFBR3	Del_18q21.32	0.41	1
Amp_19q12	Del_6q14.3	0.41	1
ADAMTS19	19q-Del	0.411	1
ADAMTS19	Del_4q22.1	0.411	1
CSMD3	Del_21q11.2	0.411	1
KRAS	19p-Del	0.411	1
WT1	Del_1p13.1	0.411	1
Amp_11q13.3	Del_10p15.3	0.411	1
ARID2	1q-Amp	0.412	1
CACNA1F	Amp_1p34.3	0.412	1
CACNA1F	Del_3q11.1	0.412	1
FCRLA	22q-Del	0.412	1
NLGN4X	9q-Del	0.412	1
RBM10	Amp_7p11.2	0.412	1
DNMT3A	Amp_12p12.1	0.413	1
NFE2L2	Amp_17q12	0.413	1
RBM10	7p-Amp	0.413	1
TCEAL5	Del_19q13.33	0.413	1
Amp_13q33.3	Amp_17q12	0.413	1
ABCB1	CXCR7	0.414	1
ABCB1	NLRP6	0.414	1
ABCB1	Del_12q24.33	0.414	1
EMG1	STK11	0.414	1
ERBB2	TP53	0.415	1
FTSJD1	SMARCA4	0.415	1
FTSJD1	17p-Del	0.415	1
SMARCA4	3p-Del	0.415	1
TPTE	Del_6q26	0.415	1
7p-Amp	9p-Del	0.415	1
8q-Amp	Del_16q24.3	0.415	1
ACVR1B	Amp_12q14.1	0.416	1
PAK1	Amp_12q14.1	0.416	1
ROBO2	Del_12q12	0.416	1
STIM1	Amp_12q14.1	0.416	1
ZNF608	Amp_12q14.1	0.416	1
DNMT3A	Amp_8q24.21	0.417	1
GNAS	20p-Amp	0.417	1
EPHA5	Del_3q11.1	0.418	1
NFE2L2	Del_6q14.3	0.418	1
OR2L13	Amp_7p11.2	0.418	1
TCEAL5	Del_6q14.3	0.418	1
7q-Amp	Amp_12q14.1	0.418	1
Amp_4q12	Amp_8q24.21	0.418	1
Amp_8q24.21	Del_3q11.1	0.418	1
CTNNB1	MET	0.419	1
MET	Del_13q34	0.419	1
NLGN4X	20q-Amp	0.419	1
NLRP5	17p-Del	0.419	1
PAPPA2	20q-Amp	0.419	1
PHKA1	RBM10	0.419	1
PHKA1	9q-Del	0.419	1
PPP3CA	RBM10	0.419	1
PPP3CA	9q-Del	0.419	1
RBM10	SLAMF9	0.419	1
SLAMF9	9q-Del	0.419	1
SMARCA4	Del_15q15.1	0.419	1
TPTE	Del_1p36.13	0.419	1
5p-Amp	Del_9p21.3	0.419	1
EPHA3	Amp_10p15.1	0.42	1
FAM65C	Del_6q26	0.42	1
FAM65C	Del_18q23	0.42	1
SLC4A3	9p-Del	0.42	1
SMARCA4	Del_22q13.32	0.42	1
SRPX	Del_18q23	0.42	1
TGFBR3	Del_18q23	0.42	1
Amp_5p15.33	Del_12q12	0.42	1
SLC4A3	Amp_10p15.1	0.421	1
SMAD4	Amp_10p15.1	0.421	1
STK11	Amp_17q12	0.421	1
17q-Amp	Del_9p21.3	0.421	1
EPHA5	Amp_1q21.3	0.422	1
EPHA5	Amp_12p12.1	0.422	1
MMP16	Amp_19q12	0.422	1
TTN	Del_17p13.3	0.422	1
Amp_12q15	Del_6q26	0.422	1
ADAMTS19	Del_19q13.33	0.423	1
APC	Amp_14q13.3	0.423	1
BRAF	Del_12q24.33	0.423	1
CXCR7	Amp_17q23.1	0.423	1
KRAS	5p-Amp	0.423	1
MGA	Del_12q24.33	0.423	1
PAK1	TP53	0.423	1
TTN	Amp_19q12	0.423	1
Amp_3q26.2	Del_12q24.33	0.423	1
Amp_8p11.21	Del_19q13.33	0.423	1
Amp_17q23.1	Del_12q24.33	0.423	1
ARID2	Amp_20q13.33	0.424	1
FAM65C	13q-Del	0.424	1
FAM65C	Del_12p13.2	0.424	1
KEAP1	MMP16	0.424	1
MGA	Del_11q23.1	0.424	1
NLGN4X	Amp_12q14.1	0.424	1
PIK3CA	TGFBR3	0.424	1
PIK3CA	WDR66	0.424	1
PIK3CA	WT1	0.424	1
PIK3CA	19q-Del	0.424	1
SLC4A3	STK11	0.424	1
SMAD4	STK11	0.424	1
STK11	TRERF1	0.424	1
TGFBR3	Del_12p13.2	0.424	1
WT1	13q-Del	0.424	1
WT1	Del_12p13.2	0.424	1
21q-Del	Del_12p13.2	0.424	1
Amp_3q26.2	Del_11q23.1	0.424	1
ACVR1B	Del_13q34	0.425	1
EGFR	19p-Del	0.425	1
KCNQ5	KRAS	0.425	1
KRAS	PAK1	0.425	1
KRAS	STIM1	0.425	1
NLGN4X	PAK1	0.425	1
NLGN4X	ZNF608	0.425	1
PDGFRA	PIK3CA	0.425	1
PDGFRA	1q-Amp	0.425	1
PDGFRA	13q-Del	0.425	1
PIK3CA	7q-Amp	0.425	1
STK11	Del_22q13.32	0.425	1
ZEB1	1q-Amp	0.425	1
ZEB1	13q-Del	0.425	1
ZEB1	Del_12p13.2	0.425	1
ZNF608	Del_13q34	0.425	1
1q-Amp	Del_4q34.3	0.425	1
7q-Amp	13q-Del	0.425	1
7q-Amp	Del_12p13.2	0.425	1
Amp_12q15	Del_19q13.33	0.425	1
Del_12q12	Del_13q34	0.425	1
ARID1A	NFE2L2	0.426	1
ARID1A	TCEAL5	0.426	1
G3BP1	Amp_12p12.1	0.426	1
LRP1B	Del_1p13.1	0.426	1
MET	8p-Del	0.426	1
NFE2L2	Amp_Xq28	0.426	1
NFE2L2	Del_3p26.2	0.426	1
RPL5	Amp_12p12.1	0.426	1
Amp_13q33.3	Del_21q11.2	0.426	1
FCRLA	RB1	0.427	1
FCRLA	18p-Del	0.427	1
OR2L13	Amp_4q12	0.427	1
RB1	Del_3q11.1	0.427	1
SETD2	Del_9p23	0.427	1
18p-Del	Amp_1p34.3	0.427	1
18p-Del	Amp_4q12	0.427	1
3q-Del	Amp_18q11.2	0.427	1
Amp_1p34.3	Del_11q25	0.427	1
1q-Amp	Amp_4q12	0.428	1
ATM	RBM10	0.429	1
EPHA5	Del_18q23	0.429	1
EPHB1	ERBB2	0.429	1
EPHB1	U2AF1	0.429	1
ERBB2	Amp_19q12	0.429	1
U2AF1	Amp_7q31.2	0.429	1
U2AF1	Del_3p21.31	0.429	1
U2AF1	Del_5q12.1	0.429	1
ARID2	Del_16q24.3	0.43	1
EPHA5	Del_11q23.1	0.43	1
NLRP5	3p-Del	0.43	1
NLRP5	Del_6q26	0.43	1
NRAS	Del_9p21.3	0.43	1
SLAMF9	Amp_7p11.2	0.43	1
1p-Amp	5p-Amp	0.43	1
Amp_7p11.2	Del_2q22.1	0.43	1
PHKA1	ZEB1	0.431	1
SLAMF9	7q-Amp	0.431	1
SRPX	TTN	0.431	1
7q-Amp	Del_2q22.1	0.431	1
NF1	Del_13q34	0.432	1
ARID2	20p-Amp	0.433	1
ATM	MET	0.433	1
ATM	20q-Amp	0.433	1
ATM	5q-Del	0.433	1
BRAF	Amp_12p12.1	0.433	1
CACNA1F	Del_19p13.3	0.433	1
CDKN2A	3p-Del	0.433	1
CXCR7	17p-Del	0.433	1
ERBB2	Del_9p23	0.433	1
GNAS	Amp_14q13.3	0.433	1
NF1	Del_16q23.1	0.433	1
NLRP6	SMARCA4	0.433	1
SMARCA4	1p-Amp	0.433	1
SMARCA4	Del_12q24.33	0.433	1
STK11	Del_5q31.1	0.433	1
TTN	Del_9q21.11	0.433	1
1p-Amp	Del_15q11.2	0.433	1
20p-Amp	3p-Del	0.433	1
Amp_14q13.3	Del_19p13.3	0.433	1
Del_12q24.33	Del_15q11.2	0.433	1
ATM	Del_12q12	0.434	1
BRAF	Amp_7p11.2	0.434	1
GAGE2A	18q-Del	0.434	1
GAGE2A	6q-Del	0.434	1
MGA	Amp_7p11.2	0.434	1
RPL5	18q-Del	0.434	1
STRA8	6q-Del	0.434	1
Amp_3q26.2	Amp_7p11.2	0.434	1
CACNA1F	Del_6q14.3	0.435	1
EMG1	Amp_7p11.2	0.435	1
MAP2	Del_10q26.3	0.435	1
NLGN4X	Del_4q34.3	0.435	1
STK19	Amp_7p11.2	0.435	1
5p-Amp	22q-Del	0.435	1
5p-Amp	Del_10p15.3	0.435	1
APC	DNMT3A	0.437	1
EGFR	20q-Amp	0.437	1
EMG1	LRP1B	0.437	1
EPHA5	Del_19q13.33	0.437	1
20q-Amp	Del_18q21.32	0.437	1
8q-Amp	5q-Del	0.437	1
CACNA1F	19q-Del	0.438	1
CACNA1F	21q-Del	0.438	1
CSMD3	Del_10q26.3	0.438	1
ERBB2	LRP1B	0.438	1
LRP1B	RPL5	0.438	1
NLRP5	Del_5q31.1	0.438	1
PAPPA2	RB1	0.438	1
PAPPA2	18p-Del	0.438	1
SRPX	Del_10p15.3	0.438	1
SRPX	Del_17p13.3	0.438	1
WT1	22q-Del	0.438	1
WT1	Del_17p13.3	0.438	1
7p-Amp	Del_3q11.1	0.438	1
Del_4q22.1	Del_10p15.3	0.438	1
ADAMTS19	NFE2L2	0.439	1
ADAMTS19	Del_6q26	0.439	1
MET	Del_11p15.5	0.439	1
SMARCA4	Del_14q32.33	0.439	1
SMARCA4	Del_Xp22.2	0.439	1
TCEAL5	19p-Del	0.439	1
TRERF1	5q-Del	0.439	1
ZEB1	Amp_20q13.33	0.439	1
19p-Del	Amp_13q33.3	0.439	1
TP53	13q-Del	0.44	1
ARID2	STK11	0.441	1
EPHA3	Del_6q14.3	0.441	1
EPHB1	Amp_3q26.2	0.441	1
EPHB1	Amp_17q23.1	0.441	1
GNAS	3q-Del	0.441	1
GNAS	Amp_1p34.3	0.441	1
ROBO2	Del_19q13.33	0.441	1
Amp_12q14.1	Del_19q13.33	0.441	1
PDGFRA	Amp_7p11.2	0.442	1
TTN	Del_13q34	0.442	1
Amp_Xq28	Del_1p13.1	0.442	1
ABCB1	Del_16q23.1	0.443	1
ACVR1B	Del_19p13.2	0.443	1
CXCR7	Del_15q15.1	0.443	1
EPHA3	ZNF608	0.443	1
EPHA3	Del_12q12	0.443	1
NLRP5	1p-Amp	0.443	1
PHKA1	Amp_17q12	0.443	1
PIK3CA	Del_19q13.33	0.443	1
SLAMF9	Del_19q13.33	0.443	1
ZNF608	Del_19p13.2	0.443	1
1p-Amp	Del_15q15.1	0.443	1
Amp_5p15.33	Del_2q22.1	0.443	1
Amp_17q12	Del_2q22.1	0.443	1
Del_2q22.1	Del_19q13.33	0.443	1
Del_12q24.33	Del_15q15.1	0.443	1
NLGN4X	Del_13q34	0.444	1
SMAD4	Amp_12p12.1	0.444	1
EPHA3	Amp_6p21.1	0.445	1
TPTE	Del_9p21.3	0.445	1
CACNA1F	Del_4q34.3	0.446	1
ZEB1	22q-Del	0.446	1
7q-Amp	22q-Del	0.446	1
EGFR	Amp_8q24.21	0.447	1
EPHA3	5q-Del	0.447	1
EPHA5	NF1	0.447	1
MET	Del_19p13.2	0.447	1
NLGN4X	Del_3q29	0.447	1
RBM10	Del_19p13.2	0.447	1
ARID1A	Amp_12q15	0.448	1
CACNA1F	Del_22q13.32	0.448	1
CDKN2A	Del_14q32.33	0.448	1
FAM65C	Amp_8p11.21	0.448	1
PRKCG	Del_11q23.1	0.448	1
SETD2	Amp_12q15	0.448	1
20p-Amp	Del_11q23.1	0.448	1
20p-Amp	Del_Xp22.2	0.448	1
19q-Del	Amp_8p11.21	0.448	1
Amp_6p21.1	Amp_Xq28	0.448	1
Amp_6p21.1	Del_3p26.2	0.448	1
Amp_22q11.22	Del_11q23.1	0.448	1
KRAS	PHKA1	0.449	1
MET	5p-Amp	0.449	1
Amp_10p15.1	Amp_17q23.1	0.449	1
DNMT3A	Amp_6p21.1	0.45	1
DNMT3A	Amp_12q15	0.45	1
MAP2	7p-Amp	0.45	1
9p-Del	Amp_5p13.1	0.45	1
9q-Del	Amp_5p13.1	0.45	1
ARID1A	Amp_8p11.21	0.451	1
ERBB2	RBM10	0.451	1
G3BP1	Amp_12q15	0.451	1
GAGE2A	Amp_6p21.1	0.451	1
KEAP1	1p-Amp	0.451	1
RIT1	Amp_6p21.1	0.451	1
SRPX	Amp_1q21.3	0.451	1
U2AF1	9q-Del	0.451	1
18q-Del	Amp_3q26.2	0.451	1
ABCB1	ACVR1B	0.452	1
ABCB1	PAK1	0.452	1
ABCB1	Del_12q12	0.452	1
ATM	7q-Amp	0.452	1
FAM65C	RB1	0.452	1
FAM65C	Del_11q25	0.452	1
MAP2	PAK1	0.452	1
MMP16	PAK1	0.452	1
MMP16	Del_12q12	0.452	1
NFE2L2	PIK3CA	0.452	1
NFE2L2	Del_12p13.2	0.452	1
RB1	SRPX	0.452	1
RB1	WT1	0.452	1
SRPX	18p-Del	0.452	1
TCEAL5	13q-Del	0.452	1
TCEAL5	Del_12p13.2	0.452	1
TGFBR3	18p-Del	0.452	1
TGFBR3	Amp_18q11.2	0.452	1
TGFBR3	Del_11q25	0.452	1
TPTE	Del_17p13.3	0.452	1
WDR66	18p-Del	0.452	1
WT1	18p-Del	0.452	1
WT1	Del_11q25	0.452	1
18p-Del	19q-Del	0.452	1
18p-Del	21q-Del	0.452	1
ARID1A	STK11	0.453	1
ARID1A	Amp_8q24.21	0.453	1
NFE2L2	8q-Amp	0.453	1
NFE2L2	Del_18q21.32	0.453	1
TCEAL5	Del_18q21.32	0.453	1
EGFR	NLGN4X	0.454	1
ARID1A	PPP3CA	0.455	1
ARID1A	SLAMF9	0.455	1
ARID1A	Del_2q22.1	0.455	1
EGFR	PIK3CA	0.455	1
EGFR	13q-Del	0.455	1
EGFR	Del_12p13.2	0.455	1
PHKA1	SETD2	0.455	1
PIK3CA	8q-Amp	0.455	1
Del_2q22.1	Del_21q11.2	0.455	1
ARID2	Amp_1p34.3	0.456	1
CTNNB1	DNMT3A	0.456	1
FTSJD1	Amp_1p34.3	0.456	1
FTSJD1	Del_3q11.1	0.456	1
PTPRU	6q-Del	0.456	1
APC	SMAD4	0.457	1
APC	15q-Del	0.457	1
EPHA5	21q-Del	0.457	1
NLGN4X	Amp_17q12	0.457	1
SLC4A3	Del_3q29	0.457	1
TRERF1	Del_3q29	0.457	1
Del_3q29	Del_11p15.5	0.457	1
21q-Del	Amp_14q13.3	0.458	1
EPHB1	SMARCA4	0.459	1
G3BP1	Amp_12q14.1	0.459	1
NFE2L2	Del_8p23.2	0.459	1
PAPPA2	6q-Del	0.459	1
RIT1	ROBO2	0.459	1
ROBO2	RPL5	0.459	1
TCEAL5	Del_8p23.2	0.459	1
Amp_12p12.1	Amp_20q13.33	0.459	1
APC	Amp_5p13.1	0.46	1
KEAP1	SIP1	0.46	1
LRP1B	Del_13q34	0.46	1
MET	Del_1p36.13	0.46	1
18p-Del	Del_19p13.3	0.46	1
Amp_1p34.3	Amp_5p15.33	0.46	1
ABCB1	MET	0.461	1
ADAMTS19	Del_1p13.1	0.461	1
APC	PAPPA2	0.461	1
BRAF	Del_16q23.1	0.461	1
FTSJD1	Amp_19q12	0.461	1
KEAP1	9q-Del	0.461	1
MAP2	MET	0.461	1
NLRP5	Del_13q12.11	0.461	1
ACVR1B	MGA	0.462	1
ACVR1B	Amp_3q26.2	0.462	1
ACVR1B	Amp_17q23.1	0.462	1
ACVR1B	Del_9q21.11	0.462	1
BRAF	PAK1	0.462	1
BRAF	ZNF608	0.462	1
BRAF	Del_12q12	0.462	1
MGA	ZNF608	0.462	1
NFE2L2	Del_6q26	0.462	1
NFE2L2	Del_18q23	0.462	1
PAK1	Amp_3q26.2	0.462	1
PAK1	Amp_17q23.1	0.462	1
SETD2	13q-Del	0.462	1
ZNF608	Amp_3q26.2	0.462	1
ZNF608	Amp_17q23.1	0.462	1
ZNF608	Del_9q21.11	0.462	1
Amp_13q33.3	Del_6q26	0.462	1
Amp_13q33.3	Del_18q23	0.462	1
Del_12p13.2	Del_21q11.2	0.462	1
DNMT3A	Amp_12q14.1	0.463	1
ERBB2	PDGFRA	0.463	1
ERBB2	Del_4q34.3	0.463	1
NF1	3p-Del	0.463	1
SLAMF9	Del_6q14.3	0.463	1
U2AF1	7q-Amp	0.463	1
U2AF1	Del_4q34.3	0.463	1
Del_2q22.1	Del_6q14.3	0.463	1
ARID1A	ROBO2	0.464	1
ATM	NLGN4X	0.464	1
CXCR7	Del_3p21.31	0.464	1
CXCR7	Del_5q12.1	0.464	1
EPHB1	1p-Amp	0.464	1
EPHB1	Del_12q24.33	0.464	1
NF1	Amp_1q21.3	0.464	1
PTPRU	Amp_7p11.2	0.464	1
ROBO2	Del_3p26.2	0.464	1
SLC4A3	Amp_7p11.2	0.464	1
17p-Del	Amp_10p15.1	0.464	1
Amp_7q31.2	Del_12q24.33	0.464	1
Amp_17q12	Del_10p15.3	0.464	1
CDKN2A	Del_10q26.3	0.465	1
EPHA5	SETD2	0.465	1
MAP2	9q-Del	0.465	1
NFE2L2	22q-Del	0.465	1
NFE2L2	Del_10p15.3	0.465	1
TCEAL5	22q-Del	0.465	1
Amp_7q31.2	Del_9p23	0.465	1
ABCB1	Amp_6p21.1	0.466	1
ABCB1	Amp_12q15	0.466	1
GNAS	SRPX	0.466	1
GNAS	WDR66	0.466	1
GNAS	21q-Del	0.466	1
MAP2	Amp_12q15	0.466	1
NLRP6	Amp_1q21.3	0.466	1
5p-Amp	3q-Del	0.466	1
5p-Amp	Amp_1p34.3	0.466	1
5p-Amp	Del_3q11.1	0.466	1
7p-Amp	Amp_17q12	0.466	1
Amp_8p11.21	Del_6q14.3	0.466	1
KRAS	Amp_1p34.3	0.467	1
LRP1B	Del_16q24.3	0.467	1
NF1	1q-Amp	0.467	1
OR2L13	ZEB1	0.467	1
OR2L13	7q-Amp	0.467	1
RB1	Del_6q14.3	0.467	1
TGFBR3	1q-Amp	0.467	1
1q-Amp	21q-Del	0.467	1
1q-Amp	Del_4q22.1	0.467	1
7q-Amp	Del_11q25	0.467	1
18p-Del	Del_4q34.3	0.467	1
G3BP1	NLGN4X	0.468	1
G3BP1	Del_13q34	0.468	1
GAGE2A	NLGN4X	0.468	1
GAGE2A	Del_13q34	0.468	1
NF1	3q-Del	0.468	1
NLGN4X	RIT1	0.468	1
PHKA1	Del_1p13.1	0.468	1
RIT1	Del_13q34	0.468	1
SLAMF9	19p-Del	0.468	1
EGFR	EPHB1	0.469	1
EPHA3	ZEB1	0.469	1
G3BP1	Del_8p23.2	0.469	1
PDGFRA	Del_19p13.2	0.469	1
PIK3CA	Del_6q26	0.469	1
RIT1	Del_8p23.2	0.469	1
U2AF1	Del_9p21.3	0.47	1
ACVR1B	17p-Del	0.471	1
ACVR1B	Del_15q11.2	0.471	1
KCNQ5	PAPPA2	0.471	1
KCNQ5	SMARCA4	0.471	1
KCNQ5	17p-Del	0.471	1
KCNQ5	Del_15q11.2	0.471	1
NLGN4X	Del_6q26	0.471	1
PAK1	17p-Del	0.471	1
PAK1	Del_15q11.2	0.471	1
SMARCA4	ZNF608	0.471	1
SMARCA4	Del_12q12	0.471	1
STIM1	17p-Del	0.471	1
ZNF608	17p-Del	0.471	1
Del_12q12	Del_15q11.2	0.471	1
EGFR	Amp_14q13.3	0.472	1
FCRLA	Del_11q23.1	0.472	1
GNAS	RBM10	0.472	1
MET	Del_17p13.3	0.472	1
OR2L13	5p-Amp	0.472	1
SMAD4	Amp_8q24.21	0.472	1
5p-Amp	18p-Del	0.472	1
5p-Amp	Amp_18q11.2	0.472	1
Amp_1p34.3	Del_11q23.1	0.472	1
Amp_1p34.3	Del_14q32.33	0.472	1
Amp_20q13.33	Del_6q26	0.472	1
Del_3q11.1	Del_Xp22.2	0.472	1
APC	EGFR	0.473	1
APC	Del_18q21.32	0.473	1
CSMD3	PAK1	0.473	1
CSMD3	WDR66	0.473	1
CSMD3	ZNF608	0.473	1
CSMD3	Del_4q22.1	0.473	1
CSMD3	Del_12q12	0.473	1
RB1	TTN	0.473	1
SMARCA4	18q-Del	0.473	1
EMG1	8p-Del	0.474	1
ERBB2	Del_19q13.33	0.474	1
NUDT11	8p-Del	0.474	1
STK19	8p-Del	0.474	1
U2AF1	Del_19q13.33	0.474	1
BRAF	20q-Amp	0.475	1
BRAF	7p-Amp	0.475	1
CTNNB1	SLC4A3	0.475	1
CTNNB1	SMAD4	0.475	1
CTNNB1	TRERF1	0.475	1
CTNNB1	15q-Del	0.475	1
CTNNB1	Del_11p15.5	0.475	1
DNMT3A	TRERF1	0.475	1
DNMT3A	Del_11p15.5	0.475	1
NLRP6	Amp_11q13.3	0.475	1
PRKCG	Del_19p13.3	0.475	1
1p-Amp	Amp_11q13.3	0.475	1
1p-Amp	Del_16q23.1	0.475	1
Amp_18q11.2	Del_22q13.32	0.475	1
ATM	GAGE2A	0.476	1
ATM	RPL5	0.476	1
APC	Del_1p36.13	0.477	1
FAM65C	7p-Amp	0.477	1
FAM65C	Amp_20q13.33	0.477	1
SRPX	7p-Amp	0.477	1
STK11	Del_14q32.33	0.477	1
8q-Amp	Del_9p23	0.477	1
FTSJD1	Amp_11q13.3	0.478	1
NLRP5	Amp_19q12	0.478	1
NLRP5	Del_5q12.1	0.478	1
PAPPA2	Del_19p13.2	0.478	1
NFE2L2	OR2L13	0.479	1
NFE2L2	RB1	0.479	1
NFE2L2	18p-Del	0.479	1
NFE2L2	Amp_18q11.2	0.479	1
RB1	TCEAL5	0.479	1
TCEAL5	18p-Del	0.479	1
TCEAL5	Del_11q25	0.479	1
18p-Del	Amp_13q33.3	0.479	1
Amp_1p34.3	Del_9p21.3	0.479	1
Amp_13q33.3	Amp_18q11.2	0.479	1
Amp_13q33.3	Del_11q25	0.479	1
Amp_14q13.3	Del_1p13.1	0.479	1
EGFR	EMG1	0.48	1
EGFR	NUDT11	0.48	1
EMG1	Del_18q21.32	0.48	1
ERBB2	Amp_7p11.2	0.48	1
NFE2L2	Del_13q12.11	0.48	1
NFE2L2	Del_17p13.3	0.48	1
NUDT11	Del_18q21.32	0.48	1
PHKA1	PIK3CA	0.48	1
PIK3CA	SLAMF9	0.48	1
PIK3CA	Del_2q22.1	0.48	1
PPP3CA	Del_12p13.2	0.48	1
SLAMF9	13q-Del	0.48	1
SMAD4	Amp_6p21.1	0.48	1
SRPX	Amp_8q24.21	0.48	1
STK19	8q-Amp	0.48	1
WT1	Amp_8q24.21	0.48	1
19p-Del	Amp_8p11.21	0.48	1
ACVR1B	NLRP5	0.481	1
ACVR1B	Del_5q31.1	0.481	1
ACVR1B	Del_15q15.1	0.481	1
ADAMTS19	PIK3CA	0.481	1
ARID1A	Del_13q34	0.481	1
ARID2	SRPX	0.481	1
ARID2	WDR66	0.481	1
ARID2	WT1	0.481	1
ARID2	Del_4q22.1	0.481	1
KCNQ5	NLRP5	0.481	1
NLGN4X	SETD2	0.481	1
NLRP5	PAK1	0.481	1
NLRP5	STIM1	0.481	1
NLRP5	Del_12q12	0.481	1
PAK1	Del_5q31.1	0.481	1
PAK1	Del_15q15.1	0.481	1
PAK1	Del_16q24.3	0.481	1
STIM1	Del_15q15.1	0.481	1
WT1	3p-Del	0.481	1
ZNF608	Del_5q31.1	0.481	1
7p-Amp	18q-Del	0.481	1
7p-Amp	6q-Del	0.481	1
6q-Del	Amp_20q13.33	0.481	1
Amp_12q14.1	Del_17p13.3	0.481	1
Del_1p13.1	Del_12p13.2	0.481	1
Del_12q12	Del_15q15.1	0.481	1
CACNA1F	Del_3p26.2	0.482	1
CDKN2A	MET	0.482	1
CDKN2A	20q-Amp	0.482	1
CDKN2A	5q-Del	0.482	1
KRAS	SMAD4	0.482	1
KRAS	Del_11p15.5	0.482	1
KRAS	Del_16q23.1	0.482	1
MET	17q-Amp	0.482	1
SETD2	TTN	0.482	1
RBM10	Amp_3q26.2	0.483	1
RBM10	Amp_17q23.1	0.483	1
9q-Del	Amp_3q26.2	0.483	1
EPHA3	Del_13q34	0.484	1
MET	Amp_8p11.21	0.484	1
SIP1	Del_9p23	0.484	1
EPHA3	GAGE2A	0.485	1
EPHA3	RIT1	0.485	1
KEAP1	17p-Del	0.485	1
KEAP1	Del_15q11.2	0.485	1
MAP2	Amp_12q14.1	0.485	1
MMP16	ROBO2	0.485	1
MMP16	Amp_12q14.1	0.485	1
RB1	Amp_17q12	0.485	1
ABCB1	PDGFRA	0.486	1
ABCB1	Del_4q34.3	0.486	1
ADAMTS19	STK11	0.486	1
ARID1A	U2AF1	0.486	1
BRAF	Amp_14q13.3	0.486	1
CXCR7	RBM10	0.486	1
CXCR7	9q-Del	0.486	1
EGFR	22q-Del	0.486	1
EMG1	Del_18q23	0.486	1
ERBB2	SETD2	0.486	1
ERBB2	Del_21q11.2	0.486	1
MAP2	PDGFRA	0.486	1
MAP2	7q-Amp	0.486	1
NLRP6	9q-Del	0.486	1
NUDT11	Del_18q23	0.486	1
RBM10	1p-Amp	0.486	1
RBM10	Del_12q24.33	0.486	1
STK19	Del_18q23	0.486	1
TTN	7q-Amp	0.486	1
U2AF1	Del_3p26.2	0.486	1
U2AF1	Del_21q11.2	0.486	1
ARID2	Amp_7p11.2	0.487	1
NF1	Amp_20q13.33	0.487	1
PRKCG	9p-Del	0.487	1
PRKCG	Del_22q13.32	0.487	1
17q-Amp	Del_22q13.32	0.487	1
20p-Amp	9p-Del	0.487	1
7p-Amp	Del_10q26.3	0.487	1
ABCB1	APC	0.488	1
APC	MAP2	0.488	1
FCRLA	Amp_10p15.1	0.488	1
FCRLA	Del_10q26.3	0.488	1
KEAP1	NF1	0.488	1
MAP2	Del_3q29	0.488	1
NLRP6	Del_9p23	0.488	1
ROBO2	Del_1p13.1	0.488	1
Amp_1p34.3	Amp_10p15.1	0.488	1
Amp_10p15.1	Del_3q11.1	0.488	1
Del_8p23.2	Del_10q26.3	0.488	1
ATM	CTNNB1	0.489	1
PAPPA2	Del_21q11.2	0.489	1
EPHB1	9p-Del	0.49	1
EPHB1	Del_22q13.32	0.49	1
MET	17p-Del	0.49	1
RBM10	Amp_8q24.21	0.49	1
TTN	Del_16q23.1	0.49	1
EPHA3	Del_19q13.33	0.491	1
PRKCG	Del_9p23	0.491	1
TP53	9p-Del	0.491	1
ZNF608	5p-Amp	0.491	1
20p-Amp	Del_9p23	0.491	1
5p-Amp	Del_19q13.33	0.491	1
KEAP1	3q-Del	0.492	1
KEAP1	Del_3q11.1	0.492	1
KRAS	Del_16q24.3	0.492	1
EPHB1	STK11	0.493	1
GNAS	NFE2L2	0.493	1
PTPRU	ROBO2	0.493	1
ROBO2	SMAD4	0.493	1
ROBO2	TRERF1	0.493	1
STK11	Amp_19q12	0.493	1
ABCB1	RIT1	0.494	1
ABCB1	RPL5	0.494	1
ARID2	RBM10	0.494	1
ARID2	9q-Del	0.494	1
CACNA1F	PHKA1	0.494	1
CACNA1F	PPP3CA	0.494	1
CACNA1F	SLAMF9	0.494	1
CACNA1F	Del_9p21.3	0.494	1
GAGE2A	MMP16	0.494	1
MMP16	RIT1	0.494	1
SETD2	7p-Amp	0.494	1
SIP1	STK11	0.494	1
TP53	9q-Del	0.494	1
7p-Amp	Del_21q11.2	0.494	1
KEAP1	7q-Amp	0.495	1
SLC4A3	15q-Del	0.495	1
SMAD4	Del_11p15.5	0.495	1
TRERF1	15q-Del	0.495	1
DNMT3A	Del_1p36.13	0.496	1
EPHA5	MET	0.496	1
FAM65C	Del_11q23.1	0.496	1
FAM65C	Del_14q32.33	0.496	1
FAM65C	Del_Xp22.2	0.496	1
WDR66	Del_11q23.1	0.496	1
WDR66	Del_Xp22.2	0.496	1
WT1	Del_11q23.1	0.496	1
WT1	Del_14q32.33	0.496	1
ABCB1	Del_9p23	0.497	1
CXCR7	ZEB1	0.497	1
CXCR7	7q-Amp	0.497	1
MAP2	Del_9p23	0.497	1
NLRP6	ZEB1	0.497	1
PAPPA2	Del_19p13.3	0.497	1
PDGFRA	1p-Amp	0.497	1
PDGFRA	Del_12q24.33	0.497	1
PIK3CA	Amp_6p21.1	0.497	1
STK11	TTN	0.497	1
TTN	Del_15q11.2	0.497	1
7q-Amp	Del_12q24.33	0.497	1
8q-Amp	Del_16q23.1	0.497	1
Amp_12q15	Del_12p13.2	0.497	1
ATM	Del_3p26.2	0.498	1
CTNNB1	8p-Del	0.498	1
EGFR	PHKA1	0.498	1
EMG1	Del_13q12.11	0.498	1
NUDT11	Del_13q12.11	0.498	1
NUDT11	Del_17p13.3	0.498	1
PHKA1	8q-Amp	0.498	1
PPP3CA	Del_18q21.32	0.498	1
SLAMF9	8q-Amp	0.498	1
TP53	17q-Amp	0.498	1
19p-Del	Amp_8q24.21	0.498	1
Amp_11q13.3	Del_19p13.3	0.498	1
ADAMTS19	ERBB2	0.499	1
APC	CDKN2A	0.499	1
APC	17q-Amp	0.499	1
CDKN2A	Del_3q29	0.499	1
ERBB2	19p-Del	0.499	1
KRAS	STK19	0.499	1
NLRP5	Amp_11q13.3	0.499	1
PRKCG	Del_3q29	0.499	1
U2AF1	19p-Del	0.499	1
U2AF1	Del_1p13.1	0.499	1
17q-Amp	Del_3q29	0.499	1
20p-Amp	Del_3q29	0.499	1
Amp_22q11.22	Del_3q29	0.499	1
NF1	8p-Del	0.5	1
SMARCA4	Amp_20q13.33	0.5	1
7p-Amp	Del_9p23	0.5	1
ACVR1B	Amp_19q12	0.501	1
ACVR1B	Del_3p21.31	0.501	1
ACVR1B	Del_5q12.1	0.501	1
CACNA1F	19p-Del	0.501	1
CACNA1F	Del_1p13.1	0.501	1
EPHB1	PAK1	0.501	1
EPHB1	ZNF608	0.501	1
EPHB1	Del_12q12	0.501	1
KCNQ5	Del_3p21.31	0.501	1
PAK1	Del_3p21.31	0.501	1
PAK1	Del_5q12.1	0.501	1
SMARCA4	9q-Del	0.501	1
ZNF608	Amp_19q12	0.501	1
ZNF608	Del_3p21.31	0.501	1
ZNF608	Del_5q12.1	0.501	1
Amp_11q13.3	Del_Xp22.2	0.501	1
APC	MGA	0.502	1
APC	Amp_17q23.1	0.502	1
APC	Del_9q21.11	0.502	1
MGA	Del_3q29	0.502	1
NLRP6	STK11	0.502	1
ROBO2	9p-Del	0.502	1
Amp_5p13.1	Del_3q11.1	0.502	1
ARID1A	OR2L13	0.503	1
ARID1A	Del_11q25	0.503	1
RB1	Del_21q11.2	0.503	1
SETD2	Amp_18q11.2	0.503	1
SETD2	Del_11q25	0.503	1
Amp_18q11.2	Del_3p26.2	0.503	1
Amp_18q11.2	Del_21q11.2	0.503	1
BRAF	GAGE2A	0.504	1
BRAF	RIT1	0.504	1
BRAF	ZEB1	0.504	1
EMG1	Amp_8p11.21	0.504	1
FCRLA	20q-Amp	0.504	1
FCRLA	5q-Del	0.504	1
G3BP1	MGA	0.504	1
G3BP1	Amp_17q23.1	0.504	1
GAGE2A	MGA	0.504	1
GAGE2A	Amp_3q26.2	0.504	1
GAGE2A	Amp_17q23.1	0.504	1
GAGE2A	Del_9q21.11	0.504	1
MET	3q-Del	0.504	1
MET	Amp_1p34.3	0.504	1
MET	Amp_4q12	0.504	1
MET	Del_3q11.1	0.504	1
MGA	RIT1	0.504	1
MGA	RPL5	0.504	1
OR2L13	Amp_12p12.1	0.504	1
RIT1	Amp_3q26.2	0.504	1
RPL5	Amp_17q23.1	0.504	1
RPL5	Del_9q21.11	0.504	1
STK19	Amp_8p11.21	0.504	1
STRA8	Del_9q21.11	0.504	1
22q-Del	Amp_5p15.33	0.504	1
Amp_5p15.33	Del_10p15.3	0.504	1
CSMD3	Del_11q25	0.505	1
KRAS	3p-Del	0.505	1
MAP2	Del_13q34	0.505	1
MET	Del_5q31.1	0.505	1
MET	Del_16q24.3	0.505	1
MMP16	NLGN4X	0.505	1
NLGN4X	Del_1p13.1	0.505	1
TRERF1	Del_6q14.3	0.505	1
Amp_7p11.2	Amp_Xq28	0.505	1
Amp_7p11.2	Del_1p36.13	0.505	1
GNAS	Del_19q13.33	0.506	1
KEAP1	Del_11q25	0.506	1
NLGN4X	SMAD4	0.506	1
SMAD4	Del_13q34	0.506	1
Amp_17q12	Del_8p23.2	0.506	1
ARID2	TCEAL5	0.507	1
FTSJD1	Amp_13q33.3	0.507	1
GNAS	Amp_8q24.21	0.507	1
NF1	19q-Del	0.507	1
NFE2L2	3p-Del	0.507	1
NLGN4X	Del_9p21.3	0.507	1
OR2L13	PHKA1	0.507	1
OR2L13	PPP3CA	0.507	1
PPP3CA	RB1	0.507	1
PPP3CA	18p-Del	0.507	1
SLAMF9	Del_6q26	0.507	1
Del_2q22.1	Del_6q26	0.507	1
CXCR7	Amp_17q12	0.508	1
CXCR7	Del_19q13.33	0.508	1
KRAS	NLGN4X	0.508	1
CDKN2A	STK11	0.509	1
CDKN2A	Amp_12p12.1	0.509	1
CSMD3	20q-Amp	0.509	1
CSMD3	5q-Del	0.509	1
DNMT3A	Del_18q21.32	0.509	1
MAP2	Amp_17q12	0.509	1
MMP16	Del_19q13.33	0.509	1
PRKCG	STK11	0.509	1
SMARCA4	Amp_12q15	0.509	1
1q-Amp	Del_16q24.3	0.509	1
17p-Del	Amp_12q15	0.509	1
Amp_12p12.1	Amp_22q11.22	0.509	1
EPHA5	NUDT11	0.51	1
Amp_8p11.21	Del_12p13.2	0.51	1
ERBB2	PIK3CA	0.511	1
ERBB2	13q-Del	0.511	1
ERBB2	Del_12p13.2	0.511	1
FCRLA	Del_19p13.3	0.511	1
FTSJD1	7q-Amp	0.511	1
KEAP1	ZNF608	0.511	1
PIK3CA	U2AF1	0.511	1
RBM10	8p-Del	0.511	1
RIT1	Amp_5p15.33	0.511	1
RPL5	Amp_5p15.33	0.511	1
TP53	19q-Del	0.511	1
U2AF1	Del_12p13.2	0.511	1
ZEB1	3p-Del	0.511	1
PAK1	Amp_11q13.3	0.512	1
SRPX	Amp_10p15.1	0.512	1
WDR66	Del_10q26.3	0.512	1
WT1	Amp_10p15.1	0.512	1
WT1	Del_10q26.3	0.512	1
19q-Del	Amp_10p15.1	0.512	1
19q-Del	Del_10q26.3	0.512	1
Amp_11q13.3	Del_18q23	0.512	1
G3BP1	17p-Del	0.513	1
GAGE2A	17p-Del	0.513	1
GAGE2A	Del_15q11.2	0.513	1
PIK3CA	Amp_12q14.1	0.513	1
RIT1	SMARCA4	0.513	1
RIT1	17p-Del	0.513	1
RPL5	17p-Del	0.513	1
RPL5	Del_15q11.2	0.513	1
SMARCA4	STRA8	0.513	1
Amp_5p15.33	Del_21q11.2	0.513	1
SIP1	Amp_7p11.2	0.514	1
SLC4A3	Amp_14q13.3	0.514	1
EPHA3	Amp_Xq28	0.515	1
EPHA3	Del_3p26.2	0.515	1
EPHA3	Del_21q11.2	0.515	1
LRP1B	NFE2L2	0.515	1
PTPRU	Del_1p36.13	0.515	1
TRERF1	Del_1p36.13	0.515	1
1q-Amp	Del_8p23.2	0.515	1
DNMT3A	MMP16	0.516	1
EMG1	1q-Amp	0.516	1
EPHA5	Amp_12q14.1	0.516	1
KRAS	RIT1	0.516	1
KRAS	RPL5	0.516	1
SRPX	5p-Amp	0.516	1
STK19	1q-Amp	0.516	1
WT1	5p-Amp	0.516	1
APC	17p-Del	0.517	1
APC	Del_15q11.2	0.517	1
CTNNB1	17q-Amp	0.517	1
DNMT3A	PRKCG	0.517	1
KRAS	Del_18q21.32	0.517	1
EPHB1	Amp_19q12	0.518	1
FTSJD1	Amp_1q21.3	0.518	1
NFE2L2	Amp_20q13.33	0.518	1
RB1	Del_18q21.32	0.518	1
RBM10	Amp_14q13.3	0.518	1
RBM10	Del_Xp22.2	0.518	1
TCEAL5	7p-Amp	0.518	1
8q-Amp	18p-Del	0.518	1
9q-Del	Del_Xp22.2	0.518	1
ATM	SMAD4	0.519	1
ATM	TRERF1	0.519	1
ATM	15q-Del	0.519	1
RB1	6q-Del	0.519	1
SMARCA4	Amp_14q13.3	0.519	1
17p-Del	Amp_14q13.3	0.519	1
ARID1A	1p-Amp	0.52	1
ARID1A	Del_12q24.33	0.52	1
CACNA1F	13q-Del	0.52	1
CACNA1F	Del_12p13.2	0.52	1
CXCR7	SETD2	0.52	1
CXCR7	Amp_Xq28	0.52	1
CXCR7	Del_3p26.2	0.52	1
DNMT3A	Del_6q26	0.52	1
MET	Amp_20q13.33	0.52	1
NLRP5	9q-Del	0.52	1
NLRP6	Amp_Xq28	0.52	1
RBM10	Del_15q15.1	0.52	1
SETD2	1p-Amp	0.52	1
SETD2	Del_12q24.33	0.52	1
TPTE	Del_14q32.33	0.52	1
1p-Amp	Del_21q11.2	0.52	1
7p-Amp	5q-Del	0.52	1
ATM	19p-Del	0.521	1
GNAS	Del_2q22.1	0.521	1
PRKCG	6q-Del	0.521	1
ACVR1B	RBM10	0.522	1
ACVR1B	9q-Del	0.522	1
APC	FCRLA	0.522	1
APC	3q-Del	0.522	1
APC	Amp_1p34.3	0.522	1
APC	Amp_4q12	0.522	1
APC	Del_3q11.1	0.522	1
EMG1	7p-Amp	0.522	1
EMG1	Amp_20q13.33	0.522	1
EPHA3	Del_6q26	0.522	1
FCRLA	9p-Del	0.522	1
FCRLA	Del_3q29	0.522	1
G3BP1	NLRP5	0.522	1
G3BP1	Del_5q31.1	0.522	1
G3BP1	Del_15q15.1	0.522	1
GAGE2A	Del_5q31.1	0.522	1
GAGE2A	Del_15q15.1	0.522	1
GAGE2A	Del_16q24.3	0.522	1
KCNQ5	RBM10	0.522	1
NFE2L2	Del_14q32.33	0.522	1
NFE2L2	Del_Xp22.2	0.522	1
NLRP5	RIT1	0.522	1
NUDT11	Amp_20q13.33	0.522	1
PAK1	RBM10	0.522	1
RB1	Del_1p13.1	0.522	1
RBM10	STIM1	0.522	1
RBM10	ZNF608	0.522	1
RBM10	Del_12q12	0.522	1
RIT1	Del_16q24.3	0.522	1
RPL5	Del_15q15.1	0.522	1
RPL5	Del_16q24.3	0.522	1
STIM1	9q-Del	0.522	1
STK19	Amp_20q13.33	0.522	1
TCEAL5	Del_11q23.1	0.522	1
TCEAL5	Del_14q32.33	0.522	1
ZNF608	9q-Del	0.522	1
9p-Del	Amp_1p34.3	0.522	1
Amp_4q12	Del_3q29	0.522	1
Amp_13q33.3	Del_11q23.1	0.522	1
Amp_13q33.3	Del_14q32.33	0.522	1
EPHA5	PIK3CA	0.523	1
SMARCA4	7q-Amp	0.523	1
TP53	22q-Del	0.523	1
7p-Amp	19p-Del	0.523	1
CACNA1F	ERBB2	0.524	1
CACNA1F	U2AF1	0.524	1
ERBB2	22q-Del	0.524	1
NLGN4X	9p-Del	0.524	1
U2AF1	22q-Del	0.524	1
EGFR	RBM10	0.525	1
PPP3CA	Del_13q12.11	0.525	1
PPP3CA	Del_17p13.3	0.525	1
5p-Amp	Del_9p23	0.525	1
7p-Amp	Del_5q31.1	0.525	1
8q-Amp	Del_17p13.3	0.525	1
BRAF	NF1	0.526	1
MGA	NLGN4X	0.526	1
NLGN4X	Amp_17q23.1	0.526	1
NLGN4X	Del_9q21.11	0.526	1
PAPPA2	19p-Del	0.526	1
5p-Amp	Amp_Xq28	0.526	1
5p-Amp	Del_3p26.2	0.526	1
ATM	Del_19p13.3	0.527	1
BRAF	Del_9p23	0.527	1
MAP2	STK11	0.527	1
PAPPA2	Amp_1q21.3	0.527	1
FAM65C	MET	0.528	1
MET	TGFBR3	0.528	1
MET	WDR66	0.528	1
MET	19q-Del	0.528	1
MET	Del_4q22.1	0.528	1
ROBO2	Del_15q11.2	0.528	1
SRPX	TPTE	0.528	1
SRPX	20q-Amp	0.528	1
TPTE	19q-Del	0.528	1
20q-Amp	21q-Del	0.528	1
FTSJD1	Amp_17q12	0.529	1
FTSJD1	Del_19q13.33	0.529	1
PIK3CA	Del_13q34	0.529	1
BRAF	DNMT3A	0.53	1
CTNNB1	Amp_17q23.1	0.53	1
DNMT3A	Amp_17q23.1	0.53	1
EPHA5	Del_3q29	0.53	1
Amp_8p11.21	Del_3p21.31	0.53	1
APC	NLRP5	0.531	1
APC	Del_15q15.1	0.531	1
EGFR	MMP16	0.531	1
KRAS	9q-Del	0.531	1
MAP2	Del_18q21.32	0.531	1
TTN	Del_12q12	0.531	1
8q-Amp	Del_6q14.3	0.531	1
Amp_18q11.2	Del_6q26	0.531	1
Del_3q29	Del_16q24.3	0.531	1
ABCB1	SETD2	0.532	1
ABCB1	Del_21q11.2	0.532	1
ADAMTS19	NLRP6	0.532	1
ADAMTS19	1p-Amp	0.532	1
ADAMTS19	Del_12q24.33	0.532	1
CXCR7	19p-Del	0.532	1
EPHA3	SMAD4	0.532	1
EPHA3	15q-Del	0.532	1
MAP2	SETD2	0.532	1
MAP2	Amp_Xq28	0.532	1
MMP16	SETD2	0.532	1
MMP16	Del_3p26.2	0.532	1
MMP16	Del_21q11.2	0.532	1
NLRP6	19p-Del	0.532	1
SMAD4	Del_19p13.2	0.532	1
19q-Del	Amp_5p15.33	0.532	1
ACVR1B	PDGFRA	0.533	1
ACVR1B	7q-Amp	0.533	1
KCNQ5	ZEB1	0.533	1
KCNQ5	7q-Amp	0.533	1
PAK1	ZEB1	0.533	1
PDGFRA	STIM1	0.533	1
PDGFRA	ZNF608	0.533	1
PDGFRA	Amp_8q24.21	0.533	1
STIM1	Del_4q34.3	0.533	1
ZEB1	ZNF608	0.533	1
ZEB1	Del_12q12	0.533	1
Amp_5p15.33	Del_9q21.11	0.533	1
ZEB1	Del_14q32.33	0.534	1
7q-Amp	Del_11q23.1	0.534	1
7q-Amp	Del_Xp22.2	0.534	1
ARID2	PHKA1	0.535	1
ARID2	PPP3CA	0.535	1
ARID2	SLAMF9	0.535	1
ARID2	Del_6q14.3	0.535	1
EPHB1	MET	0.535	1
FTSJD1	Del_2q22.1	0.535	1
FTSJD1	Del_6q14.3	0.535	1
MET	Amp_7q31.2	0.535	1
PPP3CA	3p-Del	0.535	1
7p-Amp	Del_6q14.3	0.535	1
5q-Del	Amp_7q31.2	0.535	1
CDKN2A	15q-Del	0.536	1
CDKN2A	Del_11p15.5	0.536	1
PRKCG	TRERF1	0.536	1
PTPRU	17q-Amp	0.536	1
SMAD4	17q-Amp	0.536	1
SMAD4	20p-Amp	0.536	1
SMAD4	Amp_22q11.22	0.536	1
17q-Amp	15q-Del	0.536	1
EGFR	18q-Del	0.537	1
ERBB2	OR2L13	0.537	1
ERBB2	RB1	0.537	1
ERBB2	Amp_18q11.2	0.537	1
ERBB2	Del_11q25	0.537	1
FCRLA	Del_9p23	0.537	1
GAGE2A	PAPPA2	0.537	1
NLGN4X	Del_1p36.13	0.537	1
OR2L13	U2AF1	0.537	1
RB1	U2AF1	0.537	1
U2AF1	18p-Del	0.537	1
Amp_1p34.3	Del_9p23	0.537	1
CACNA1F	Amp_12q14.1	0.538	1
EPHA3	19p-Del	0.538	1
EPHA3	Del_1p13.1	0.538	1
NFE2L2	Del_10q26.3	0.538	1
TCEAL5	Del_10q26.3	0.538	1
Amp_11q13.3	Del_5q12.1	0.538	1
CTNNB1	FCRLA	0.539	1
CTNNB1	3q-Del	0.539	1
CTNNB1	Amp_1p34.3	0.539	1
CTNNB1	Del_3q11.1	0.539	1
DNMT3A	Amp_1p34.3	0.539	1
DNMT3A	Amp_4q12	0.539	1
FAM65C	KRAS	0.539	1
KRAS	TGFBR3	0.539	1
KRAS	WDR66	0.539	1
NF1	Del_3p26.2	0.539	1
PTPRU	Del_9p21.3	0.539	1
SLC4A3	Del_9p21.3	0.539	1
WT1	Del_9p21.3	0.539	1
18q-Del	Amp_6p21.1	0.539	1
PDGFRA	8p-Del	0.54	1
PIK3CA	Amp_18q11.2	0.54	1
PIK3CA	Del_11q25	0.54	1
STK11	Del_18q23	0.54	1
TTN	Amp_1p34.3	0.54	1
7q-Amp	8p-Del	0.54	1
22q-Del	Amp_8p11.21	0.54	1
CXCR7	Del_9p21.3	0.541	1
KEAP1	SRPX	0.541	1
KEAP1	TGFBR3	0.541	1
LRP1B	18q-Del	0.541	1
NF1	NUDT11	0.541	1
CSMD3	Del_14q32.33	0.542	1
EPHB1	RIT1	0.542	1
G3BP1	Amp_7q31.2	0.542	1
G3BP1	Del_5q12.1	0.542	1
GAGE2A	Amp_7q31.2	0.542	1
GAGE2A	Amp_19q12	0.542	1
GAGE2A	Del_3p21.31	0.542	1
GAGE2A	Del_5q12.1	0.542	1
MGA	8p-Del	0.542	1
RBM10	Del_10q26.3	0.542	1
RIT1	Amp_19q12	0.542	1
RIT1	Del_5q12.1	0.542	1
RPL5	Amp_19q12	0.542	1
RPL5	Del_3p21.31	0.542	1
RPL5	Del_5q12.1	0.542	1
STRA8	Amp_7q31.2	0.542	1
STRA8	Amp_19q12	0.542	1
CTNNB1	Del_13q12.11	0.543	1
CTNNB1	Del_17p13.3	0.543	1
EPHA5	PPP3CA	0.543	1
ROBO2	Del_8p23.2	0.543	1
TTN	Del_1p36.13	0.543	1
ABCB1	Del_19p13.2	0.544	1
ACVR1B	Amp_17q12	0.544	1
ACVR1B	Del_19q13.33	0.544	1
CTNNB1	17p-Del	0.544	1
CTNNB1	Del_15q11.2	0.544	1
CXCR7	PIK3CA	0.544	1
CXCR7	Del_12p13.2	0.544	1
DNMT3A	17p-Del	0.544	1
DNMT3A	Del_15q11.2	0.544	1
MMP16	Del_19p13.2	0.544	1
NLRP6	Del_12p13.2	0.544	1
PAPPA2	TCEAL5	0.544	1
STIM1	Del_19q13.33	0.544	1
TP53	Del_12q24.33	0.544	1
ZNF608	Amp_17q12	0.544	1
ZNF608	Del_19q13.33	0.544	1
Del_12q12	Del_19q13.33	0.544	1
APC	SRPX	0.545	1
APC	19q-Del	0.545	1
APC	21q-Del	0.545	1
APC	Del_4q22.1	0.545	1
ATM	BRAF	0.545	1
ATM	Amp_3q26.2	0.545	1
CDKN2A	Amp_6p21.1	0.545	1
CDKN2A	Amp_12q15	0.545	1
FAM65C	Del_3q29	0.545	1
SMARCA4	Amp_17q12	0.545	1
SMARCA4	Del_19q13.33	0.545	1
SRPX	Del_3q29	0.545	1
TGFBR3	Del_3q29	0.545	1
WT1	Del_3q29	0.545	1
17q-Amp	Amp_6p21.1	0.545	1
17q-Amp	Amp_12q15	0.545	1
3q-Del	Amp_12p12.1	0.545	1
Amp_4q12	Amp_12p12.1	0.545	1
Amp_5p15.33	Amp_12q15	0.545	1
Amp_17q12	Del_15q11.2	0.545	1
ABCB1	15q-Del	0.546	1
ACVR1B	Del_9p23	0.546	1
ARID2	Del_21q11.2	0.546	1
ATM	PIK3CA	0.546	1
EGFR	ERBB2	0.546	1
FTSJD1	SETD2	0.546	1
FTSJD1	Del_3p26.2	0.546	1
MAP2	Del_11p15.5	0.546	1
SETD2	3p-Del	0.546	1
U2AF1	8q-Amp	0.546	1
U2AF1	Del_18q21.32	0.546	1
Del_9p23	Del_12q12	0.546	1
EGFR	Del_11p15.5	0.547	1
MET	TTN	0.547	1
TRERF1	Del_18q21.32	0.547	1
ABCB1	Del_18q23	0.548	1
MMP16	Del_6q26	0.548	1
17q-Amp	Amp_7p11.2	0.548	1
ARID1A	Del_9q21.11	0.549	1
ARID2	5p-Amp	0.549	1
EPHA5	8p-Del	0.549	1
FAM65C	Del_19p13.3	0.549	1
MGA	Del_21q11.2	0.549	1
RB1	Amp_12q15	0.549	1
SLAMF9	Del_11q23.1	0.549	1
SLAMF9	Del_14q32.33	0.549	1
SRPX	Del_19p13.3	0.549	1
WT1	Del_19p13.3	0.549	1
5p-Amp	3p-Del	0.549	1
Amp_7p11.2	Del_3p21.31	0.549	1
Del_2q22.1	Del_14q32.33	0.549	1
ATM	Del_1p36.13	0.55	1
GNAS	U2AF1	0.55	1
NLRP5	Del_6q14.3	0.55	1
TP53	Del_9p23	0.55	1
MET	Del_16q23.1	0.551	1
ROBO2	Amp_20q13.33	0.551	1
7p-Amp	13q-Del	0.551	1
7p-Amp	Amp_12q14.1	0.551	1
Amp_17q12	Del_14q32.33	0.551	1
G3BP1	Del_16q23.1	0.552	1
GAGE2A	Amp_11q13.3	0.552	1
GAGE2A	Del_16q23.1	0.552	1
PHKA1	1q-Amp	0.552	1
PRKCG	Del_8p23.2	0.552	1
RIT1	Amp_11q13.3	0.552	1
RIT1	Del_16q23.1	0.552	1
RPL5	Amp_11q13.3	0.552	1
RPL5	Del_16q23.1	0.552	1
STRA8	Amp_11q13.3	0.552	1
17q-Amp	Del_8p23.2	0.552	1
EPHA5	Del_10p15.3	0.553	1
KEAP1	18q-Del	0.553	1
KRAS	Del_18q23	0.553	1
MET	TCEAL5	0.553	1
NFE2L2	20q-Amp	0.553	1
TCEAL5	20q-Amp	0.553	1
TCEAL5	5q-Del	0.553	1
EGFR	PDGFRA	0.554	1
EGFR	Del_4q34.3	0.554	1
EMG1	TPTE	0.554	1
STK11	20q-Amp	0.554	1
STK19	TPTE	0.554	1
U2AF1	Del_18q23	0.554	1
ZEB1	Del_18q21.32	0.554	1
ABCB1	19p-Del	0.555	1
ACVR1B	ARID1A	0.555	1
ACVR1B	SETD2	0.555	1
ACVR1B	Amp_Xq28	0.555	1
ACVR1B	Del_3p26.2	0.555	1
ACVR1B	Del_21q11.2	0.555	1
ARID1A	KCNQ5	0.555	1
CDKN2A	Del_1p36.13	0.555	1
EPHA3	Del_13q12.11	0.555	1
FCRLA	STK11	0.555	1
KCNQ5	SETD2	0.555	1
KCNQ5	Del_3p26.2	0.555	1
MMP16	19p-Del	0.555	1
PAK1	Del_3p26.2	0.555	1
PAK1	Del_21q11.2	0.555	1
SETD2	ZNF608	0.555	1
SETD2	Del_12q12	0.555	1
STK11	Amp_4q12	0.555	1
ZNF608	Amp_Xq28	0.555	1
Amp_22q11.22	Del_1p36.13	0.555	1
BRAF	Amp_8q24.21	0.556	1
CACNA1F	NLRP6	0.556	1
CACNA1F	1p-Amp	0.556	1
CACNA1F	Amp_14q13.3	0.556	1
CXCR7	22q-Del	0.556	1
CXCR7	Del_10p15.3	0.556	1
EGFR	SIP1	0.556	1
FCRLA	6q-Del	0.556	1
SIP1	8q-Amp	0.556	1
18q-Del	Amp_1p34.3	0.556	1
18q-Del	Amp_4q12	0.556	1
22q-Del	Amp_14q13.3	0.556	1
CDKN2A	ROBO2	0.557	1
FCRLA	TRERF1	0.557	1
FCRLA	15q-Del	0.557	1
NF1	20q-Amp	0.557	1
PAPPA2	Del_9p21.3	0.557	1
PTPRU	Amp_1p34.3	0.557	1
SLC4A3	3q-Del	0.557	1
SLC4A3	Amp_4q12	0.557	1
SMAD4	Amp_1p34.3	0.557	1
TRERF1	3q-Del	0.557	1
Amp_1p34.3	Del_11p15.5	0.557	1
Amp_12q14.1	Amp_22q11.22	0.557	1
CTNNB1	NLRP5	0.558	1
DNMT3A	Del_5q31.1	0.558	1
DNMT3A	Del_15q15.1	0.558	1
DNMT3A	Del_16q24.3	0.558	1
STK11	Amp_12q15	0.558	1
TRERF1	Del_18q23	0.558	1
ZEB1	Amp_10p15.1	0.558	1
7q-Amp	Del_10q26.3	0.558	1
Amp_3q26.2	Del_18q21.32	0.558	1
KEAP1	NRAS	0.559	1
SETD2	Del_6q14.3	0.559	1
SLC4A3	Amp_17q23.1	0.559	1
SMAD4	Amp_17q23.1	0.559	1
SRPX	9p-Del	0.559	1
SRPX	Del_22q13.32	0.559	1
TGFBR3	9p-Del	0.559	1
TGFBR3	Del_22q13.32	0.559	1
WT1	9p-Del	0.559	1
18p-Del	Amp_5p15.33	0.559	1
ACVR1B	STK11	0.56	1
CACNA1F	OR2L13	0.56	1
CACNA1F	18p-Del	0.56	1
CACNA1F	Del_11q25	0.56	1
KCNQ5	STK11	0.56	1
PDGFRA	Del_9p23	0.56	1
RB1	Del_10p15.3	0.56	1
1p-Amp	Amp_5p13.1	0.56	1
APC	Amp_7q31.2	0.561	1
APC	Del_3p21.31	0.561	1
APC	Del_5q12.1	0.561	1
PPP3CA	Amp_20q13.33	0.561	1
1q-Amp	Del_5q12.1	0.561	1
Amp_19q12	Del_3q29	0.561	1
CTNNB1	SRPX	0.562	1
CTNNB1	TGFBR3	0.562	1
CTNNB1	Del_4q22.1	0.562	1
DNMT3A	SRPX	0.562	1
DNMT3A	WDR66	0.562	1
DNMT3A	WT1	0.562	1
DNMT3A	19q-Del	0.562	1
EPHA3	PIK3CA	0.562	1
EPHA3	13q-Del	0.562	1
EPHA3	Del_12p13.2	0.562	1
G3BP1	RBM10	0.562	1
GAGE2A	9q-Del	0.562	1
RBM10	RIT1	0.562	1
RBM10	RPL5	0.562	1
RBM10	STRA8	0.562	1
RIT1	9q-Del	0.562	1
RPL5	9q-Del	0.562	1
SRPX	Amp_5p13.1	0.562	1
WT1	Amp_5p13.1	0.562	1
21q-Del	Amp_5p13.1	0.562	1
ADAMTS19	3p-Del	0.564	1
ARID2	U2AF1	0.564	1
ARID2	Del_1p13.1	0.564	1
CXCR7	Del_6q14.3	0.564	1
EPHA5	Amp_7p11.2	0.564	1
ERBB2	FTSJD1	0.564	1
FTSJD1	U2AF1	0.564	1
FTSJD1	19p-Del	0.564	1
PDGFRA	9p-Del	0.564	1
PPP3CA	Del_10q26.3	0.564	1
RB1	Amp_12q14.1	0.564	1
U2AF1	3p-Del	0.564	1
ZEB1	Del_22q13.32	0.564	1
7q-Amp	Del_22q13.32	0.564	1
19p-Del	Amp_5p15.33	0.564	1
EGFR	TPTE	0.565	1
EPHA3	KEAP1	0.565	1
EPHA3	Del_9q21.11	0.565	1
6q-Del	Amp_11q13.3	0.565	1
Amp_3q26.2	Del_19p13.2	0.565	1
ADAMTS19	NF1	0.566	1
ATM	SMARCA4	0.566	1
MET	RBM10	0.566	1
MET	9q-Del	0.566	1
NF1	19p-Del	0.566	1
RBM10	20q-Amp	0.566	1
Amp_8q24.21	Del_5q12.1	0.566	1
ACVR1B	19p-Del	0.567	1
ACVR1B	Del_1p13.1	0.567	1
ADAMTS19	PAK1	0.567	1
ADAMTS19	STIM1	0.567	1
ARID1A	Del_15q11.2	0.567	1
EMG1	Del_19p13.3	0.567	1
G3BP1	TP53	0.567	1
KCNQ5	Del_1p13.1	0.567	1
NFE2L2	TPTE	0.567	1
NUDT11	Del_19p13.3	0.567	1
PAK1	Del_1p13.1	0.567	1
SETD2	17p-Del	0.567	1
SMARCA4	Del_21q11.2	0.567	1
STK19	Del_19p13.3	0.567	1
Amp_Xq28	Del_15q11.2	0.567	1
CXCR7	RB1	0.568	1
CXCR7	18p-Del	0.568	1
CXCR7	Del_11q25	0.568	1
EPHA3	9p-Del	0.568	1
KCNQ5	Amp_8q24.21	0.568	1
KRAS	OR2L13	0.568	1
NLRP6	Del_11q25	0.568	1
OR2L13	Del_12q24.33	0.568	1
PAK1	Amp_8q24.21	0.568	1
ZNF608	Amp_8q24.21	0.568	1
1p-Amp	18p-Del	0.568	1
1p-Amp	Amp_18q11.2	0.568	1
1p-Amp	Del_11q25	0.568	1
5p-Amp	Amp_13q33.3	0.568	1
Amp_18q11.2	Del_12q24.33	0.568	1
ARID1A	Del_14q32.33	0.569	1
CDKN2A	Del_13q34	0.569	1
NLGN4X	17q-Amp	0.569	1
PDGFRA	Del_6q26	0.569	1
SETD2	Del_11q23.1	0.569	1
TPTE	Amp_Xq28	0.569	1
8p-Del	Amp_6p21.1	0.569	1
8p-Del	Amp_17q12	0.569	1
ATM	CACNA1F	0.57	1
RB1	Amp_8p11.21	0.57	1
18q-Del	Amp_7p11.2	0.57	1
Amp_13q33.3	Del_3q29	0.57	1
APC	Amp_8q24.21	0.571	1
G3BP1	PDGFRA	0.572	1
G3BP1	ZEB1	0.572	1
G3BP1	7q-Amp	0.572	1
GAGE2A	PDGFRA	0.572	1
GAGE2A	7q-Amp	0.572	1
GAGE2A	Del_4q34.3	0.572	1
PDGFRA	RIT1	0.572	1
PDGFRA	RPL5	0.572	1
RPL5	ZEB1	0.572	1
RPL5	7q-Amp	0.572	1
RPL5	Del_4q34.3	0.572	1
STRA8	ZEB1	0.572	1
STRA8	7q-Amp	0.572	1
EPHA3	Amp_1q21.3	0.573	1
SLC4A3	Del_15q11.2	0.573	1
SMAD4	SMARCA4	0.573	1
SMAD4	Del_15q11.2	0.573	1
SMARCA4	15q-Del	0.573	1
TRERF1	Del_15q11.2	0.573	1
ADAMTS19	KRAS	0.574	1
ARID1A	Amp_5p13.1	0.574	1
ARID2	18q-Del	0.574	1
ARID2	6q-Del	0.574	1
ATM	CSMD3	0.574	1
EMG1	9p-Del	0.574	1
EMG1	Del_22q13.32	0.574	1
FTSJD1	6q-Del	0.574	1
MGA	Del_18q23	0.574	1
NUDT11	9p-Del	0.574	1
NUDT11	Del_22q13.32	0.574	1
PAPPA2	17p-Del	0.574	1
PAPPA2	Del_15q11.2	0.574	1
STK19	9p-Del	0.574	1
7p-Amp	Del_19p13.3	0.574	1
Amp_5p13.1	Del_21q11.2	0.574	1
CDKN2A	17q-Amp	0.575	1
CDKN2A	20p-Amp	0.575	1
CDKN2A	Amp_22q11.22	0.575	1
CSMD3	KRAS	0.575	1
GNAS	Amp_12q15	0.575	1
17q-Amp	20p-Amp	0.575	1
7p-Amp	Del_13q34	0.575	1
Amp_10p15.1	Del_19q13.33	0.575	1
ABCB1	Del_1p36.13	0.576	1
APC	Amp_11q13.3	0.576	1
APC	Del_16q23.1	0.576	1
FCRLA	Del_1p36.13	0.576	1
MAP2	Del_1p36.13	0.576	1
MMP16	Del_1p36.13	0.576	1
NLGN4X	Del_8p23.2	0.576	1
Amp_4q12	Del_1p36.13	0.576	1
Del_3q29	Del_16q23.1	0.576	1
EPHB1	7p-Amp	0.577	1
EPHB1	Amp_20q13.33	0.577	1
Amp_12q15	Del_5q12.1	0.577	1
Amp_19q12	Amp_20q13.33	0.577	1
ACVR1B	PIK3CA	0.578	1
ACVR1B	Del_12p13.2	0.578	1
ERBB2	Del_11q23.1	0.578	1
ERBB2	Del_14q32.33	0.578	1
ERBB2	Del_Xp22.2	0.578	1
KCNQ5	PIK3CA	0.578	1
PAK1	Del_12p13.2	0.578	1
PIK3CA	STIM1	0.578	1
PIK3CA	Del_12q12	0.578	1
STIM1	13q-Del	0.578	1
STIM1	Del_12p13.2	0.578	1
U2AF1	Del_Xp22.2	0.578	1
ZNF608	13q-Del	0.578	1
ZNF608	Del_12p13.2	0.578	1
13q-Del	Del_12q12	0.578	1
FCRLA	Amp_6p21.1	0.579	1
FCRLA	Amp_12q15	0.579	1
MAP2	Del_12p13.2	0.579	1
MMP16	13q-Del	0.579	1
MMP16	Del_12p13.2	0.579	1
OR2L13	Amp_18q11.2	0.579	1
RB1	18p-Del	0.579	1
ZEB1	Amp_7q31.2	0.579	1
7q-Amp	Del_5q12.1	0.579	1
Amp_1p34.3	Amp_12q15	0.579	1
Amp_4q12	Amp_12q15	0.579	1
Amp_12q15	Del_3q11.1	0.579	1
EPHA3	Del_9p21.3	0.58	1
ERBB2	Amp_8p11.21	0.58	1
ERBB2	Del_8p23.2	0.58	1
FAM65C	SMAD4	0.58	1
FAM65C	15q-Del	0.58	1
FAM65C	Del_11p15.5	0.58	1
KRAS	Del_4q34.3	0.58	1
MET	PPP3CA	0.58	1
NLGN4X	18p-Del	0.58	1
NLGN4X	Del_11q25	0.58	1
OR2L13	Del_13q34	0.58	1
PPP3CA	20q-Amp	0.58	1
PTPRU	SRPX	0.58	1
SLAMF9	20q-Amp	0.58	1
SLC4A3	19q-Del	0.58	1
SLC4A3	Del_17p13.3	0.58	1
SMAD4	WDR66	0.58	1
SMAD4	19q-Del	0.58	1
SMAD4	21q-Del	0.58	1
SMAD4	Del_13q12.11	0.58	1
SRPX	Del_11p15.5	0.58	1
TRERF1	21q-Del	0.58	1
TRERF1	Del_13q12.11	0.58	1
U2AF1	Amp_8p11.21	0.58	1
WT1	15q-Del	0.58	1
21q-Del	Del_11p15.5	0.58	1
5q-Del	Del_2q22.1	0.58	1
Amp_8p11.21	Del_9p21.3	0.58	1
Del_3q29	Del_8p23.2	0.58	1
ATM	Amp_22q11.22	0.581	1
CSMD3	Del_16q24.3	0.581	1
FAM65C	Amp_12p12.1	0.581	1
GNAS	NLRP6	0.581	1
NLGN4X	6q-Del	0.581	1
NRAS	Del_9p23	0.581	1
WDR66	Amp_12p12.1	0.581	1
7p-Amp	22q-Del	0.581	1
7p-Amp	Del_10p15.3	0.581	1
ARID2	KEAP1	0.582	1
ARID2	Del_12p13.2	0.582	1
G3BP1	Amp_17q12	0.582	1
GAGE2A	Del_19q13.33	0.582	1
MET	ZEB1	0.582	1
PDGFRA	5q-Del	0.582	1
RIT1	Amp_17q12	0.582	1
RPL5	Amp_17q12	0.582	1
TP53	Del_21q11.2	0.582	1
TPTE	20q-Amp	0.582	1
7q-Amp	5q-Del	0.582	1
Amp_5p13.1	Del_9p23	0.582	1
NF1	Amp_12q15	0.583	1
ABCB1	BRAF	0.584	1
ARID2	8q-Amp	0.584	1
ARID2	Del_18q21.32	0.584	1
EGFR	FTSJD1	0.584	1
EPHA5	RB1	0.584	1
EPHA5	SIP1	0.584	1
EPHA5	18p-Del	0.584	1
MAP2	Amp_3q26.2	0.584	1
MAP2	Del_9q21.11	0.584	1
RBM10	Amp_8p11.21	0.584	1
ARID1A	Del_15q15.1	0.585	1
ARID1A	Del_16q24.3	0.585	1
EGFR	Del_15q11.2	0.585	1
EPHA3	17p-Del	0.585	1
FAM65C	Del_9p23	0.585	1
SETD2	Del_5q31.1	0.585	1
SMARCA4	8q-Amp	0.585	1
SMARCA4	Del_18q21.32	0.585	1
TGFBR3	Del_9p23	0.585	1
WT1	Del_9p23	0.585	1
8q-Amp	17p-Del	0.585	1
Amp_Xq28	Del_15q15.1	0.585	1
ADAMTS19	Del_11q23.1	0.586	1
ADAMTS19	Del_14q32.33	0.586	1
CACNA1F	Del_19p13.2	0.586	1
DNMT3A	NFE2L2	0.586	1
DNMT3A	Amp_13q33.3	0.586	1
EPHA3	22q-Del	0.586	1
STK11	9p-Del	0.586	1
8q-Amp	Del_1p36.13	0.586	1
ATM	Del_15q15.1	0.587	1
CTNNB1	Amp_19q12	0.587	1
CTNNB1	Del_3p21.31	0.587	1
CTNNB1	Del_5q12.1	0.587	1
SMAD4	Del_5q31.1	0.587	1
STK11	Del_4q34.3	0.587	1
TRERF1	Del_15q15.1	0.587	1
20p-Amp	Del_6q14.3	0.587	1
Amp_1q21.3	Del_2q22.1	0.587	1
CTNNB1	Amp_20q13.33	0.588	1
CXCR7	8p-Del	0.588	1
EMG1	Amp_12p12.1	0.588	1
MAP2	Amp_7p11.2	0.588	1
MMP16	Amp_7p11.2	0.588	1
NUDT11	Amp_12p12.1	0.588	1
1p-Amp	8p-Del	0.588	1
ACVR1B	Amp_7p11.2	0.589	1
BRAF	Del_1p36.13	0.589	1
CSMD3	7q-Amp	0.589	1
EPHA5	ERBB2	0.589	1
GNAS	Del_13q12.11	0.589	1
KCNQ5	Amp_7p11.2	0.589	1
MET	Del_9p21.3	0.589	1
MGA	Del_1p36.13	0.589	1
NF1	PPP3CA	0.589	1
NF1	Del_2q22.1	0.589	1
PAK1	Amp_7p11.2	0.589	1
PRKCG	Amp_8q24.21	0.589	1
Amp_17q12	Del_22q13.32	0.589	1
ACVR1B	CACNA1F	0.59	1
ACVR1B	22q-Del	0.59	1
ACVR1B	Del_10p15.3	0.59	1
CACNA1F	PAK1	0.59	1
FCRLA	ROBO2	0.59	1
FCRLA	Amp_12q14.1	0.59	1
KCNQ5	Del_10p15.3	0.59	1
NRAS	STK11	0.59	1
PAK1	22q-Del	0.59	1
ROBO2	Del_3q11.1	0.59	1
STIM1	Del_10p15.3	0.59	1
ZNF608	22q-Del	0.59	1
22q-Del	Del_12q12	0.59	1
Amp_1p34.3	Amp_12q14.1	0.59	1
Del_10p15.3	Del_12q12	0.59	1
KEAP1	PAPPA2	0.591	1
RBM10	Del_3q29	0.591	1
SMAD4	Amp_8p11.21	0.591	1
STK19	Amp_1q21.3	0.591	1
6q-Del	Amp_5p15.33	0.591	1
ARID1A	Amp_10p15.1	0.592	1
ARID1A	Del_10q26.3	0.592	1
ERBB2	Amp_10p15.1	0.592	1
FAM65C	18q-Del	0.592	1
FAM65C	6q-Del	0.592	1
SETD2	Del_10q26.3	0.592	1
TGFBR3	18q-Del	0.592	1
TGFBR3	6q-Del	0.592	1
U2AF1	Amp_10p15.1	0.592	1
U2AF1	Del_10q26.3	0.592	1
WDR66	18q-Del	0.592	1
18q-Del	19q-Del	0.592	1
3q-Del	Amp_7p11.2	0.592	1
Amp_10p15.1	Del_3p26.2	0.592	1
ARID1A	RIT1	0.593	1
ARID1A	RPL5	0.593	1
GAGE2A	SETD2	0.593	1
GAGE2A	Del_3p26.2	0.593	1
GAGE2A	Del_21q11.2	0.593	1
KEAP1	TCEAL5	0.593	1
RPL5	SETD2	0.593	1
RPL5	Amp_Xq28	0.593	1
RPL5	Del_3p26.2	0.593	1
RPL5	Del_21q11.2	0.593	1
SETD2	STRA8	0.593	1
8p-Del	Amp_20q13.33	0.593	1
ARID2	NLRP6	0.594	1
ARID2	1p-Amp	0.594	1
CXCR7	3p-Del	0.594	1
EPHA3	20p-Amp	0.594	1
FTSJD1	1p-Amp	0.594	1
FTSJD1	Del_12q24.33	0.594	1
NLRP6	3p-Del	0.594	1
PRKCG	Del_19p13.2	0.594	1
ROBO2	8p-Del	0.594	1
ROBO2	Del_3p21.31	0.594	1
Amp_12p12.1	Del_19p13.3	0.594	1
Amp_12q14.1	Del_3p21.31	0.594	1
Amp_12q14.1	Del_5q12.1	0.594	1
APC	PHKA1	0.595	1
BRAF	13q-Del	0.595	1
BRAF	Del_19p13.3	0.595	1
CDKN2A	3q-Del	0.595	1
CDKN2A	Amp_1p34.3	0.595	1
CDKN2A	Amp_4q12	0.595	1
CDKN2A	Del_3q11.1	0.595	1
EMG1	18q-Del	0.595	1
FCRLA	PRKCG	0.595	1
FCRLA	17q-Amp	0.595	1
FCRLA	20p-Amp	0.595	1
FCRLA	Amp_22q11.22	0.595	1
KRAS	Del_19p13.2	0.595	1
MGA	13q-Del	0.595	1
NUDT11	18q-Del	0.595	1
PHKA1	Del_3q29	0.595	1
PRKCG	3q-Del	0.595	1
PRKCG	Del_3q11.1	0.595	1
SIP1	7p-Amp	0.595	1
SIP1	Amp_20q13.33	0.595	1
STK19	18q-Del	0.595	1
17q-Amp	3q-Del	0.595	1
17q-Amp	Amp_1p34.3	0.595	1
17q-Amp	Del_3q11.1	0.595	1
20p-Amp	3q-Del	0.595	1
20p-Amp	Amp_4q12	0.595	1
20p-Amp	Del_3q11.1	0.595	1
3q-Del	Amp_22q11.22	0.595	1
Amp_17q23.1	Del_12p13.2	0.595	1
Amp_22q11.22	Del_3q11.1	0.595	1
Del_2q22.1	Del_3q29	0.595	1
CXCR7	8q-Amp	0.596	1
EGFR	NLRP6	0.596	1
FTSJD1	Del_6q26	0.596	1
FTSJD1	Del_18q23	0.596	1
KEAP1	Del_17p13.3	0.596	1
NLRP5	8p-Del	0.596	1
ZEB1	Amp_12p12.1	0.596	1
1p-Amp	Del_18q21.32	0.596	1
7q-Amp	Amp_12p12.1	0.596	1
Amp_7p11.2	Del_18q21.32	0.596	1
CSMD3	Amp_12q14.1	0.597	1
1q-Amp	Amp_18q11.2	0.597	1
FAM65C	Del_1p36.13	0.598	1
LRP1B	Del_2q22.1	0.598	1
MET	Del_19q13.33	0.598	1
NFE2L2	9p-Del	0.598	1
NFE2L2	Del_22q13.32	0.598	1
PAPPA2	Del_1p36.13	0.598	1
PDGFRA	Amp_11q13.3	0.598	1
TCEAL5	9p-Del	0.598	1
TCEAL5	Del_22q13.32	0.598	1
WDR66	Del_1p36.13	0.598	1
WT1	Del_1p36.13	0.598	1
20q-Amp	Del_19q13.33	0.598	1
7q-Amp	Del_13q12.11	0.598	1
Amp_1q21.3	Amp_18q11.2	0.598	1
ARID1A	Del_19p13.3	0.599	1
CSMD3	22q-Del	0.599	1
CSMD3	Del_3q11.1	0.599	1
EPHA5	RBM10	0.599	1
GNAS	RB1	0.599	1
Amp_6p21.1	Del_16q23.1	0.599	1
Amp_8q24.21	Del_6q26	0.599	1
KRAS	ROBO2	0.6	1
PAPPA2	PPP3CA	0.6	1
FTSJD1	Del_10p15.3	0.601	1
PAPPA2	Del_10p15.3	0.601	1
TP53	Del_9q21.11	0.601	1
ACVR1B	OR2L13	0.602	1
ACVR1B	RB1	0.602	1
ACVR1B	18p-Del	0.602	1
ACVR1B	Amp_18q11.2	0.602	1
ACVR1B	Del_11q25	0.602	1
ARID2	Amp_6p21.1	0.602	1
DNMT3A	Amp_11q13.3	0.602	1
FAM65C	STK11	0.602	1
FCRLA	NLGN4X	0.602	1
FTSJD1	Amp_6p21.1	0.602	1
GNAS	Amp_8p11.21	0.602	1
KCNQ5	RB1	0.602	1
KCNQ5	Amp_18q11.2	0.602	1
MET	Amp_14q13.3	0.602	1
NFE2L2	Del_9p21.3	0.602	1
NLGN4X	Amp_1p34.3	0.602	1
NLGN4X	Del_3q11.1	0.602	1
PAK1	18p-Del	0.602	1
PAK1	Del_11q25	0.602	1
RB1	STIM1	0.602	1
RB1	Del_12q12	0.602	1
SMARCA4	Del_1p36.13	0.602	1
STIM1	18p-Del	0.602	1
STIM1	Amp_18q11.2	0.602	1
STK11	WDR66	0.602	1
STK11	WT1	0.602	1
STK11	Del_4q22.1	0.602	1
ZNF608	18p-Del	0.602	1
18p-Del	Del_12q12	0.602	1
Amp_18q11.2	Del_12q12	0.602	1
ABCB1	CACNA1F	0.603	1
ARID2	Del_8p23.2	0.603	1
CACNA1F	MAP2	0.603	1
NFE2L2	SLC4A3	0.603	1
NFE2L2	15q-Del	0.603	1
NFE2L2	Del_11p15.5	0.603	1
PAPPA2	7q-Amp	0.603	1
PTPRU	TCEAL5	0.603	1
SLC4A3	Amp_13q33.3	0.603	1
SMAD4	TCEAL5	0.603	1
SMAD4	Amp_13q33.3	0.603	1
TCEAL5	TRERF1	0.603	1
TCEAL5	15q-Del	0.603	1
TCEAL5	Del_11p15.5	0.603	1
TRERF1	Amp_13q33.3	0.603	1
Amp_6p21.1	Del_18q23	0.603	1
Amp_7p11.2	Del_10p15.3	0.603	1
ADAMTS19	GAGE2A	0.604	1
ADAMTS19	STRA8	0.604	1
CSMD3	Del_9q21.11	0.604	1
CXCR7	Del_6q26	0.604	1
G3BP1	Del_1p13.1	0.604	1
GAGE2A	19p-Del	0.604	1
GAGE2A	Del_1p13.1	0.604	1
KRAS	6q-Del	0.604	1
MMP16	SMARCA4	0.604	1
MMP16	17p-Del	0.604	1
PIK3CA	Del_11q23.1	0.604	1
PIK3CA	Del_Xp22.2	0.604	1
RIT1	19p-Del	0.604	1
RPL5	Del_1p13.1	0.604	1
STRA8	19p-Del	0.604	1
RBM10	Amp_1q21.3	0.605	1
ABCB1	CDKN2A	0.606	1
BRAF	Del_17p13.3	0.606	1
EPHA3	NLRP5	0.606	1
EPHA3	Del_15q15.1	0.606	1
ERBB2	7p-Amp	0.606	1
PAPPA2	Del_16q24.3	0.606	1
ADAMTS19	Del_5q31.1	0.607	1
APC	ZEB1	0.607	1
APC	Del_4q34.3	0.607	1
CDKN2A	Amp_5p15.33	0.607	1
ERBB2	MET	0.607	1
ERBB2	20q-Amp	0.607	1
LRP1B	Del_Xp22.2	0.607	1
MET	U2AF1	0.607	1
NLRP5	Del_1p13.1	0.607	1
NLRP6	Amp_5p15.33	0.607	1
PDGFRA	Del_3q29	0.607	1
PRKCG	Amp_5p15.33	0.607	1
TCEAL5	Amp_5p15.33	0.607	1
TP53	Amp_1p34.3	0.607	1
TP53	Del_3q11.1	0.607	1
U2AF1	20q-Amp	0.607	1
U2AF1	5q-Del	0.607	1
ZEB1	Del_3q29	0.607	1
Amp_7q31.2	Del_6q14.3	0.607	1
CXCR7	Del_11q23.1	0.608	1
EMG1	Amp_8q24.21	0.608	1
KEAP1	TRERF1	0.608	1
KEAP1	15q-Del	0.608	1
KEAP1	Del_11p15.5	0.608	1
MET	Del_19p13.3	0.608	1
NLRP6	Del_11q23.1	0.608	1
PHKA1	TPTE	0.608	1
TPTE	Del_2q22.1	0.608	1
1p-Amp	Del_11q23.1	0.608	1
1p-Amp	Del_14q32.33	0.608	1
1p-Amp	Del_Xp22.2	0.608	1
Del_12q24.33	Del_Xp22.2	0.608	1
ATM	PAPPA2	0.609	1
ATM	Del_8p23.2	0.609	1
EMG1	Amp_12q15	0.609	1
NUDT11	Amp_12q15	0.609	1
STK19	Amp_6p21.1	0.609	1
STK19	Amp_12q15	0.609	1
19p-Del	Amp_10p15.1	0.609	1
ATM	Del_9p23	0.61	1
OR2L13	7p-Amp	0.61	1
7p-Amp	Del_11q25	0.61	1
CTNNB1	SLAMF9	0.611	1
CTNNB1	Del_2q22.1	0.611	1
DNMT3A	PHKA1	0.611	1
DNMT3A	PPP3CA	0.611	1
DNMT3A	SLAMF9	0.611	1
DNMT3A	Del_2q22.1	0.611	1
EGFR	Amp_12q14.1	0.611	1
RB1	Del_19p13.2	0.611	1
ROBO2	8q-Amp	0.611	1
ROBO2	Del_18q21.32	0.611	1
8q-Amp	Del_5q31.1	0.611	1
EGFR	Amp_20q13.33	0.612	1
NLGN4X	Amp_7q31.2	0.612	1
PIK3CA	Del_15q11.2	0.612	1
TTN	Del_8p23.2	0.612	1
ARID1A	EGFR	0.613	1
BRAF	9p-Del	0.613	1
EGFR	SETD2	0.613	1
EGFR	Del_21q11.2	0.613	1
KEAP1	Del_16q23.1	0.613	1
KRAS	TCEAL5	0.613	1
KRAS	1p-Amp	0.613	1
PDGFRA	18q-Del	0.613	1
PHKA1	Amp_8q24.21	0.613	1
PTPRU	1q-Amp	0.613	1
ZEB1	6q-Del	0.613	1
1q-Amp	15q-Del	0.613	1
7q-Amp	18q-Del	0.613	1
ACVR1B	GNAS	0.614	1
ATM	FCRLA	0.614	1
ATM	Amp_1p34.3	0.614	1
DNMT3A	Del_9p23	0.614	1
GNAS	KCNQ5	0.614	1
GNAS	PAK1	0.614	1
GNAS	STIM1	0.614	1
GNAS	ZNF608	0.614	1
TPTE	Del_3q29	0.614	1
21q-Del	Amp_12q15	0.614	1
ARID1A	20q-Amp	0.615	1
EPHB1	TRERF1	0.615	1
EPHB1	15q-Del	0.615	1
FCRLA	Amp_1p34.3	0.615	1
FCRLA	Amp_4q12	0.615	1
G3BP1	13q-Del	0.615	1
GAGE2A	PIK3CA	0.615	1
GAGE2A	13q-Del	0.615	1
GAGE2A	Del_12p13.2	0.615	1
KCNQ5	Del_9p21.3	0.615	1
MET	Del_21q11.2	0.615	1
PIK3CA	RIT1	0.615	1
RIT1	Del_12p13.2	0.615	1
SETD2	5q-Del	0.615	1
SETD2	9p-Del	0.615	1
SLC4A3	Del_3p21.31	0.615	1
SMAD4	Amp_7q31.2	0.615	1
SMAD4	Del_3p21.31	0.615	1
SMAD4	Del_5q12.1	0.615	1
STRA8	Del_12p13.2	0.615	1
TRERF1	Amp_19q12	0.615	1
20q-Amp	Amp_Xq28	0.615	1
20q-Amp	Del_21q11.2	0.615	1
Amp_1p34.3	Amp_4q12	0.615	1
EMG1	ROBO2	0.616	1
EMG1	Amp_12q14.1	0.616	1
NUDT11	Amp_12q14.1	0.616	1
PRKCG	8p-Del	0.616	1
ROBO2	STK19	0.616	1
STK19	Amp_12q14.1	0.616	1
20p-Amp	8p-Del	0.616	1
Amp_5p13.1	Del_1p13.1	0.616	1
ARID2	ROBO2	0.617	1
ARID2	Amp_12q14.1	0.617	1
CDKN2A	SRPX	0.617	1
CDKN2A	19q-Del	0.617	1
CDKN2A	21q-Del	0.617	1
CDKN2A	Del_4q22.1	0.617	1
DNMT3A	KRAS	0.617	1
DNMT3A	RBM10	0.617	1
DNMT3A	9q-Del	0.617	1
EGFR	Del_9p23	0.617	1
FAM65C	17q-Amp	0.617	1
FAM65C	20p-Amp	0.617	1
FAM65C	Amp_22q11.22	0.617	1
FTSJD1	ROBO2	0.617	1
PDGFRA	RBM10	0.617	1
PRKCG	19q-Del	0.617	1
WT1	17q-Amp	0.617	1
ZEB1	9q-Del	0.617	1
17q-Amp	19q-Del	0.617	1
17q-Amp	Del_4q22.1	0.617	1
20p-Amp	19q-Del	0.617	1
20p-Amp	21q-Del	0.617	1
8q-Amp	Del_14q32.33	0.617	1
21q-Del	Amp_22q11.22	0.617	1
Amp_10p15.1	Amp_12p12.1	0.617	1
TCEAL5	Amp_12p12.1	0.618	1
Amp_12p12.1	Amp_13q33.3	0.618	1
BRAF	CACNA1F	0.619	1
BRAF	CDKN2A	0.619	1
BRAF	PRKCG	0.619	1
BRAF	20p-Amp	0.619	1
BRAF	Amp_22q11.22	0.619	1
CACNA1F	Amp_3q26.2	0.619	1
CDKN2A	Amp_3q26.2	0.619	1
KCNQ5	Del_6q14.3	0.619	1
MGA	20p-Amp	0.619	1
PRKCG	Amp_17q23.1	0.619	1
STIM1	Del_6q14.3	0.619	1
20p-Amp	Amp_17q23.1	0.619	1
22q-Del	Amp_3q26.2	0.619	1
ARID2	RB1	0.62	1
ARID2	Amp_18q11.2	0.62	1
ARID2	Del_11q25	0.62	1
CXCR7	Del_13q12.11	0.62	1
FTSJD1	RB1	0.62	1
FTSJD1	Amp_18q11.2	0.62	1
KEAP1	KRAS	0.62	1
KRAS	Del_10q26.3	0.62	1
MET	Del_22q13.32	0.62	1
3p-Del	Amp_18q11.2	0.62	1
ARID1A	Amp_19q12	0.621	1
ARID2	Del_17p13.3	0.621	1
CXCR7	Amp_10p15.1	0.621	1
CXCR7	Del_10q26.3	0.621	1
EPHB1	SETD2	0.621	1
EPHB1	Del_21q11.2	0.621	1
KEAP1	Amp_8p11.21	0.621	1
NFE2L2	Del_1p36.13	0.621	1
SETD2	Amp_19q12	0.621	1
SETD2	Del_5q12.1	0.621	1
1p-Amp	Amp_10p15.1	0.621	1
1q-Amp	Amp_12p12.1	0.621	1
Amp_8q24.21	Del_3p26.2	0.621	1
Amp_10p15.1	Del_12q24.33	0.621	1
Amp_12p12.1	Del_19q13.33	0.621	1
Amp_13q33.3	Del_1p36.13	0.621	1
APC	ERBB2	0.622	1
APC	U2AF1	0.622	1
BRAF	Amp_8p11.21	0.622	1
CACNA1F	Del_11q23.1	0.622	1
EPHA3	Amp_8q24.21	0.622	1
EPHA3	Amp_20q13.33	0.622	1
GAGE2A	STK11	0.622	1
KEAP1	Del_22q13.32	0.622	1
LRP1B	Del_12q12	0.622	1
RBM10	Amp_12q15	0.622	1
RIT1	STK11	0.622	1
TPTE	Del_13q12.11	0.622	1
U2AF1	Del_3q29	0.622	1
Amp_8q24.21	Del_19p13.2	0.622	1
APC	Amp_17q12	0.623	1
EMG1	NLGN4X	0.623	1
EMG1	Del_13q34	0.623	1
EPHA3	18q-Del	0.623	1
NLGN4X	NUDT11	0.623	1
NUDT11	Del_13q34	0.623	1
TPTE	Del_12p13.2	0.623	1
Amp_17q12	Del_3q29	0.623	1
BRAF	SMARCA4	0.624	1
BRAF	17p-Del	0.624	1
NF1	Del_5q12.1	0.624	1
PTPRU	7p-Amp	0.624	1
SLC4A3	7p-Amp	0.624	1
SLC4A3	Amp_20q13.33	0.624	1
SMARCA4	Amp_3q26.2	0.624	1
TRERF1	7p-Amp	0.624	1
Amp_20q13.33	Del_11p15.5	0.624	1
ADAMTS19	Del_19p13.3	0.625	1
CSMD3	Del_1p13.1	0.625	1
MAP2	NLRP5	0.625	1
ROBO2	TGFBR3	0.625	1
ROBO2	WDR66	0.625	1
ROBO2	21q-Del	0.625	1
WDR66	Amp_12q14.1	0.625	1
WT1	Amp_12q14.1	0.625	1
19q-Del	Amp_12q14.1	0.625	1
ACVR1B	ARID2	0.626	1
ACVR1B	3p-Del	0.626	1
ARID2	PAK1	0.626	1
ARID2	ZNF608	0.626	1
CACNA1F	GAGE2A	0.626	1
CACNA1F	RPL5	0.626	1
CACNA1F	STRA8	0.626	1
CDKN2A	EGFR	0.626	1
EGFR	20p-Amp	0.626	1
EPHA3	Amp_1p34.3	0.626	1
EPHA5	7q-Amp	0.626	1
EPHA5	18q-Del	0.626	1
EPHA5	6q-Del	0.626	1
FCRLA	Del_19p13.2	0.626	1
FTSJD1	PAK1	0.626	1
FTSJD1	STIM1	0.626	1
FTSJD1	ZNF608	0.626	1
FTSJD1	Del_12q12	0.626	1
G3BP1	22q-Del	0.626	1
GAGE2A	22q-Del	0.626	1
GAGE2A	Del_10p15.3	0.626	1
KCNQ5	3p-Del	0.626	1
KEAP1	MGA	0.626	1
KEAP1	Amp_3q26.2	0.626	1
MMP16	Amp_12p12.1	0.626	1
PAK1	3p-Del	0.626	1
RIT1	Del_10p15.3	0.626	1
RPL5	22q-Del	0.626	1
RPL5	Del_10p15.3	0.626	1
ZNF608	3p-Del	0.626	1
20p-Amp	Del_18q21.32	0.626	1
ABCB1	RB1	0.627	1
ABCB1	Del_11q25	0.627	1
ARID1A	Amp_14q13.3	0.627	1
DNMT3A	Del_8p23.2	0.627	1
MAP2	18p-Del	0.627	1
MAP2	Del_11q25	0.627	1
MMP16	RB1	0.627	1
MMP16	Amp_18q11.2	0.627	1
PHKA1	SLC4A3	0.627	1
PHKA1	SMAD4	0.627	1
PHKA1	TRERF1	0.627	1
PPP3CA	PTPRU	0.627	1
PPP3CA	SLC4A3	0.627	1
PPP3CA	SMAD4	0.627	1
PPP3CA	15q-Del	0.627	1
PPP3CA	Del_11p15.5	0.627	1
PTPRU	Del_2q22.1	0.627	1
SETD2	Amp_14q13.3	0.627	1
SLAMF9	TRERF1	0.627	1
SLAMF9	15q-Del	0.627	1
SMAD4	Del_2q22.1	0.627	1
15q-Del	Del_2q22.1	0.627	1
Amp_14q13.3	Amp_Xq28	0.627	1
CXCR7	Amp_8p11.21	0.628	1
NLRP6	Amp_8p11.21	0.628	1
ROBO2	Del_18q23	0.628	1
Amp_8p11.21	Del_1p36.13	0.628	1
ADAMTS19	8p-Del	0.629	1
EPHA5	Del_17p13.3	0.629	1
FCRLA	Del_6q14.3	0.629	1
NFE2L2	18q-Del	0.629	1
NFE2L2	6q-Del	0.629	1
NLRP5	13q-Del	0.629	1
NLRP5	Del_12p13.2	0.629	1
RBM10	Amp_20q13.33	0.629	1
SLC4A3	Del_16q23.1	0.629	1
SMAD4	Amp_11q13.3	0.629	1
18q-Del	Amp_13q33.3	0.629	1
6q-Del	Amp_13q33.3	0.629	1
ABCB1	1q-Amp	0.63	1
ATM	NUDT11	0.63	1
ATM	Del_5q12.1	0.63	1
MAP2	1q-Amp	0.63	1
MMP16	1q-Amp	0.63	1
PIK3CA	TTN	0.63	1
5p-Amp	Amp_12p12.1	0.63	1
Amp_6p21.1	Del_11q23.1	0.63	1
ADAMTS19	MET	0.631	1
ADAMTS19	20q-Amp	0.631	1
SMARCA4	Del_17p13.3	0.631	1
TTN	Del_11q25	0.631	1
20q-Amp	19p-Del	0.631	1
ARID2	Del_9p21.3	0.632	1
CTNNB1	Del_4q34.3	0.632	1
DNMT3A	7q-Amp	0.632	1
SMARCA4	17q-Amp	0.632	1
TTN	3p-Del	0.632	1
TTN	Del_22q13.32	0.632	1
17q-Amp	Del_15q11.2	0.632	1
20p-Amp	17p-Del	0.632	1
ACVR1B	Amp_5p13.1	0.633	1
CTNNB1	STK11	0.633	1
DNMT3A	STK11	0.633	1
KEAP1	PIK3CA	0.633	1
PAPPA2	STK11	0.633	1
STIM1	Amp_5p13.1	0.633	1
ZNF608	Amp_5p13.1	0.633	1
Amp_5p13.1	Del_12q12	0.633	1
8q-Amp	9p-Del	0.634	1
8q-Amp	Del_6q26	0.634	1
Amp_11q13.3	Del_13q34	0.634	1
Amp_13q33.3	Del_9p23	0.634	1
CACNA1F	Del_15q11.2	0.635	1
CXCR7	MET	0.635	1
CXCR7	5q-Del	0.635	1
MET	NLRP6	0.635	1
MET	1p-Amp	0.635	1
MET	Del_12q24.33	0.635	1
NLRP6	20q-Amp	0.635	1
SMARCA4	22q-Del	0.635	1
SMARCA4	Del_10p15.3	0.635	1
TTN	7p-Amp	0.635	1
TTN	Amp_20q13.33	0.635	1
Amp_8q24.21	Del_5q31.1	0.635	1
CDKN2A	Del_6q26	0.636	1
EPHA3	GNAS	0.636	1
EPHA5	NLRP6	0.636	1
EPHA5	1p-Amp	0.636	1
FAM65C	FCRLA	0.636	1
FAM65C	3q-Del	0.636	1
FAM65C	Amp_4q12	0.636	1
FAM65C	Del_3q11.1	0.636	1
FAM65C	Del_13q34	0.636	1
FCRLA	WDR66	0.636	1
FCRLA	19q-Del	0.636	1
FCRLA	21q-Del	0.636	1
FCRLA	Del_4q22.1	0.636	1
NLGN4X	WDR66	0.636	1
NLGN4X	21q-Del	0.636	1
PDGFRA	7q-Amp	0.636	1
PDGFRA	Del_4q34.3	0.636	1
PRKCG	Del_6q26	0.636	1
SIP1	Del_19p13.3	0.636	1
SRPX	3q-Del	0.636	1
SRPX	Amp_1p34.3	0.636	1
SRPX	Amp_4q12	0.636	1
SRPX	Del_3q11.1	0.636	1
TGFBR3	Amp_1p34.3	0.636	1
TGFBR3	Del_3q11.1	0.636	1
WDR66	Amp_1p34.3	0.636	1
WT1	3q-Del	0.636	1
ZEB1	7q-Amp	0.636	1
17q-Amp	Del_18q23	0.636	1
20p-Amp	Del_18q23	0.636	1
21q-Del	Amp_1p34.3	0.636	1
21q-Del	Amp_4q12	0.636	1
21q-Del	Del_13q34	0.636	1
CTNNB1	U2AF1	0.637	1
DNMT3A	ERBB2	0.637	1
DNMT3A	U2AF1	0.637	1
EMG1	EPHA3	0.637	1
EMG1	Del_19p13.2	0.637	1
EPHA3	STK19	0.637	1
G3BP1	RB1	0.637	1
G3BP1	18p-Del	0.637	1
G3BP1	Amp_18q11.2	0.637	1
GAGE2A	OR2L13	0.637	1
GAGE2A	RB1	0.637	1
GAGE2A	18p-Del	0.637	1
GAGE2A	Del_11q25	0.637	1
NUDT11	Del_19p13.2	0.637	1
OR2L13	RPL5	0.637	1
PHKA1	9p-Del	0.637	1
PPP3CA	9p-Del	0.637	1
PPP3CA	Del_22q13.32	0.637	1
RB1	RPL5	0.637	1
RIT1	18p-Del	0.637	1
RIT1	Amp_18q11.2	0.637	1
RIT1	Del_11q25	0.637	1
RPL5	18p-Del	0.637	1
STK19	Del_19p13.2	0.637	1
19q-Del	Amp_7p11.2	0.637	1
21q-Del	Amp_7p11.2	0.637	1
Amp_7p11.2	Amp_18q11.2	0.637	1
Amp_7p11.2	Del_4q22.1	0.637	1
Amp_7p11.2	Del_11q25	0.637	1
ABCB1	Amp_1p34.3	0.638	1
APC	SETD2	0.638	1
APC	Del_3p26.2	0.638	1
APC	Del_21q11.2	0.638	1
EPHA5	Amp_3q26.2	0.638	1
EPHA5	Amp_17q23.1	0.638	1
FCRLA	MMP16	0.638	1
MMP16	Del_3q11.1	0.638	1
PAPPA2	Amp_17q12	0.638	1
SETD2	Del_3q29	0.638	1
Amp_Xq28	Del_3q29	0.638	1
ACVR1B	Del_11q23.1	0.639	1
ACVR1B	Del_Xp22.2	0.639	1
APC	Del_19p13.3	0.639	1
ARID1A	Amp_11q13.3	0.639	1
ARID1A	Del_16q23.1	0.639	1
EPHA3	Del_9p23	0.639	1
KCNQ5	Del_Xp22.2	0.639	1
NFE2L2	PRKCG	0.639	1
NFE2L2	17q-Amp	0.639	1
NFE2L2	20p-Amp	0.639	1
NFE2L2	Amp_22q11.22	0.639	1
PAK1	Del_11q23.1	0.639	1
PAK1	Del_14q32.33	0.639	1
PAK1	Del_Xp22.2	0.639	1
PAPPA2	Del_11q25	0.639	1
PRKCG	TCEAL5	0.639	1
ROBO2	Del_13q34	0.639	1
SETD2	Del_16q23.1	0.639	1
STIM1	Del_14q32.33	0.639	1
TCEAL5	17q-Amp	0.639	1
TCEAL5	20p-Amp	0.639	1
TTN	17q-Amp	0.639	1
ZNF608	Del_14q32.33	0.639	1
17q-Amp	Amp_13q33.3	0.639	1
7p-Amp	Amp_12p12.1	0.639	1
8p-Del	Del_10q26.3	0.639	1
ADAMTS19	9p-Del	0.64	1
GNAS	7p-Amp	0.64	1
NRAS	8p-Del	0.64	1
OR2L13	Del_11q23.1	0.64	1
OR2L13	Del_14q32.33	0.64	1
SIP1	TP53	0.64	1
Amp_18q11.2	Del_11q23.1	0.64	1
Del_3q29	Del_9p21.3	0.64	1
KCNQ5	8p-Del	0.641	1
MET	PAPPA2	0.641	1
TPTE	Amp_12q14.1	0.641	1
ZNF608	8p-Del	0.641	1
ADAMTS19	Amp_19q12	0.642	1
ADAMTS19	Del_3p21.31	0.642	1
BRAF	Del_11q25	0.642	1
EPHB1	Del_1p36.13	0.642	1
EPHB1	Del_1p13.1	0.642	1
MGA	Amp_18q11.2	0.642	1
MGA	Del_11q25	0.642	1
NF1	Del_9p21.3	0.642	1
PDGFRA	Del_8p23.2	0.642	1
SIP1	9p-Del	0.642	1
ZEB1	Del_8p23.2	0.642	1
18p-Del	Amp_3q26.2	0.642	1
18p-Del	Amp_17q23.1	0.642	1
Amp_3q26.2	Del_11q25	0.642	1
Amp_19q12	Del_1p13.1	0.642	1
RBM10	SLC4A3	0.643	1
RBM10	TRERF1	0.643	1
SMARCA4	Del_15q11.2	0.643	1
TTN	Del_4q22.1	0.643	1
ABCB1	18q-Del	0.644	1
BRAF	Del_16q24.3	0.644	1
CDKN2A	Del_16q24.3	0.644	1
EGFR	NRAS	0.644	1
MAP2	18q-Del	0.644	1
MMP16	18q-Del	0.644	1
MMP16	6q-Del	0.644	1
PHKA1	Del_1p36.13	0.644	1
ROBO2	Del_11q23.1	0.644	1
ROBO2	Del_14q32.33	0.644	1
STK19	Del_9p21.3	0.644	1
17q-Amp	Del_16q24.3	0.644	1
20p-Amp	Del_5q31.1	0.644	1
Amp_12q14.1	Del_Xp22.2	0.644	1
Amp_17q23.1	Del_15q15.1	0.644	1
ABCB1	EMG1	0.645	1
ABCB1	NUDT11	0.645	1
CXCR7	1q-Amp	0.645	1
EMG1	MAP2	0.645	1
EMG1	MMP16	0.645	1
MAP2	NUDT11	0.645	1
MMP16	NUDT11	0.645	1
PDGFRA	Amp_12q15	0.645	1
Amp_6p21.1	Del_4q34.3	0.645	1
ABCB1	7p-Amp	0.646	1
ARID2	ATM	0.646	1
ATM	FTSJD1	0.646	1
ATM	3p-Del	0.646	1
DNMT3A	TPTE	0.646	1
MAP2	Amp_20q13.33	0.646	1
20q-Amp	Amp_12p12.1	0.646	1
5q-Del	Amp_12p12.1	0.646	1
ATM	SRPX	0.647	1
ATM	19q-Del	0.647	1
CTNNB1	Amp_17q12	0.647	1
DNMT3A	Amp_17q12	0.647	1
DNMT3A	Del_19q13.33	0.647	1
Amp_8p11.21	Del_15q11.2	0.647	1
Amp_19q12	Del_9p23	0.647	1
CSMD3	Del_19q13.33	0.648	1
EGFR	KCNQ5	0.648	1
EGFR	Del_12q12	0.648	1
EPHA3	Amp_7q31.2	0.648	1
G3BP1	Amp_7p11.2	0.648	1
KCNQ5	8q-Amp	0.648	1
MET	PIK3CA	0.648	1
MET	Del_12p13.2	0.648	1
MGA	Amp_12p12.1	0.648	1
PAK1	8q-Amp	0.648	1
PAK1	Del_18q21.32	0.648	1
PIK3CA	5q-Del	0.648	1
PPP3CA	TTN	0.648	1
RIT1	Amp_7p11.2	0.648	1
STIM1	8q-Amp	0.648	1
TRERF1	Amp_1q21.3	0.648	1
ZNF608	8q-Amp	0.648	1
ZNF608	Del_18q21.32	0.648	1
8q-Amp	Del_12q12	0.648	1
Amp_7p11.2	Amp_12q14.1	0.648	1
Amp_7q31.2	Del_19p13.2	0.648	1
Del_12q12	Del_18q21.32	0.648	1
APC	CXCR7	0.649	1
APC	NLRP6	0.649	1
APC	1p-Amp	0.649	1
APC	Del_12q24.33	0.649	1
CXCR7	Del_3q29	0.649	1
EPHA5	Amp_8p11.21	0.649	1
G3BP1	GNAS	0.649	1
GAGE2A	GNAS	0.649	1
GNAS	RIT1	0.649	1
NLRP6	Del_3q29	0.649	1
NRAS	Del_6q26	0.649	1
NRAS	Del_18q23	0.649	1
1p-Amp	Del_3q29	0.649	1
Amp_5p15.33	Del_6q26	0.649	1
CDKN2A	Del_9p21.3	0.65	1
EPHB1	8p-Del	0.65	1
FCRLA	Amp_3q26.2	0.65	1
FCRLA	Amp_17q23.1	0.65	1
FCRLA	Del_9q21.11	0.65	1
G3BP1	Amp_8q24.21	0.65	1
MGA	3q-Del	0.65	1
MGA	Amp_4q12	0.65	1
NFE2L2	STK11	0.65	1
TCEAL5	Amp_6p21.1	0.65	1
TPTE	Del_10p15.3	0.65	1
3q-Del	Amp_17q23.1	0.65	1
8p-Del	Amp_7q31.2	0.65	1
Amp_1p34.3	Amp_17q23.1	0.65	1
Amp_4q12	Amp_17q23.1	0.65	1
APC	9p-Del	0.651	1
CACNA1F	NLRP5	0.651	1
CACNA1F	Del_5q31.1	0.651	1
ERBB2	TPTE	0.651	1
NLRP5	22q-Del	0.651	1
8q-Amp	Del_10q26.3	0.651	1
ACVR1B	Amp_10p15.1	0.652	1
ACVR1B	Del_10q26.3	0.652	1
BRAF	NUDT11	0.652	1
EMG1	MGA	0.652	1
EMG1	Amp_3q26.2	0.652	1
EMG1	Amp_17q23.1	0.652	1
EMG1	Del_9q21.11	0.652	1
KCNQ5	Amp_10p15.1	0.652	1
NF1	Del_22q13.32	0.652	1
NUDT11	Amp_3q26.2	0.652	1
NUDT11	Amp_17q23.1	0.652	1
NUDT11	Del_9q21.11	0.652	1
PAK1	Amp_10p15.1	0.652	1
STIM1	Amp_10p15.1	0.652	1
STK19	Amp_17q23.1	0.652	1
STK19	Del_9q21.11	0.652	1
ZNF608	Amp_10p15.1	0.652	1
9p-Del	Amp_7p11.2	0.652	1
Amp_10p15.1	Del_12q12	0.652	1
CXCR7	7p-Amp	0.653	1
ERBB2	PTPRU	0.653	1
ERBB2	TRERF1	0.653	1
ERBB2	15q-Del	0.653	1
ERBB2	Del_11p15.5	0.653	1
NLRP6	7p-Amp	0.653	1
NLRP6	Amp_20q13.33	0.653	1
SLC4A3	U2AF1	0.653	1
SMAD4	U2AF1	0.653	1
U2AF1	15q-Del	0.653	1
7p-Amp	Del_12q24.33	0.653	1
Amp_20q13.33	Del_12q24.33	0.653	1
SETD2	Del_17p13.3	0.654	1
1q-Amp	Amp_3q26.2	0.654	1
Amp_5p13.1	Amp_12p12.1	0.654	1
Amp_Xq28	Del_13q12.11	0.654	1
NLRP6	TTN	0.655	1
PDGFRA	7p-Amp	0.655	1
PDGFRA	Amp_20q13.33	0.655	1
SLC4A3	Del_9p23	0.655	1
SMAD4	Del_9p23	0.655	1
TTN	1p-Amp	0.655	1
7p-Amp	Del_4q34.3	0.655	1
FAM65C	SRPX	0.656	1
FAM65C	WDR66	0.656	1
FAM65C	WT1	0.656	1
FAM65C	21q-Del	0.656	1
FAM65C	Del_4q22.1	0.656	1
KEAP1	8q-Amp	0.656	1
SRPX	WT1	0.656	1
SRPX	19q-Del	0.656	1
STIM1	Del_18q23	0.656	1
WDR66	WT1	0.656	1
ZEB1	Del_19q13.33	0.656	1
20p-Amp	Del_17p13.3	0.656	1
Del_12q12	Del_18q23	0.656	1
CSMD3	PHKA1	0.657	1
EMG1	Amp_5p13.1	0.657	1
FCRLA	NFE2L2	0.657	1
FCRLA	TCEAL5	0.657	1
FCRLA	Amp_13q33.3	0.657	1
LRP1B	Del_4q22.1	0.657	1
NF1	Del_11p15.5	0.657	1
NFE2L2	3q-Del	0.657	1
NFE2L2	Amp_1p34.3	0.657	1
NFE2L2	Amp_4q12	0.657	1
NFE2L2	Del_3q11.1	0.657	1
PDGFRA	TRERF1	0.657	1
PHKA1	Amp_12p12.1	0.657	1
PTPRU	ZEB1	0.657	1
SETD2	9q-Del	0.657	1
SLC4A3	ZEB1	0.657	1
SLC4A3	7q-Amp	0.657	1
SMAD4	7q-Amp	0.657	1
SMAD4	Del_4q34.3	0.657	1
STK19	Amp_5p13.1	0.657	1
TCEAL5	Amp_4q12	0.657	1
TRERF1	ZEB1	0.657	1
TRERF1	7q-Amp	0.657	1
7q-Amp	Del_11p15.5	0.657	1
8p-Del	Amp_1p34.3	0.657	1
ERBB2	Amp_1q21.3	0.658	1
LRP1B	Del_18q23	0.658	1
RB1	SMARCA4	0.658	1
17p-Del	Amp_18q11.2	0.658	1
Amp_19q12	Del_9p21.3	0.658	1
ADAMTS19	Amp_11q13.3	0.659	1
EPHA3	FAM65C	0.659	1
EPHA3	21q-Del	0.659	1
EPHA3	Del_4q22.1	0.659	1
NRAS	Del_13q12.11	0.659	1
NRAS	Del_17p13.3	0.659	1
SRPX	Del_19p13.2	0.659	1
WT1	Del_19p13.2	0.659	1
7p-Amp	Del_1p36.13	0.659	1
ABCB1	Amp_8q24.21	0.66	1
ARID2	G3BP1	0.66	1
ARID2	GAGE2A	0.66	1
EMG1	Del_15q11.2	0.66	1
FAM65C	Del_8p23.2	0.66	1
FTSJD1	G3BP1	0.66	1
FTSJD1	GAGE2A	0.66	1
FTSJD1	STRA8	0.66	1
GAGE2A	3p-Del	0.66	1
KEAP1	Del_10q26.3	0.66	1
NFE2L2	ROBO2	0.66	1
NFE2L2	Amp_12q14.1	0.66	1
NUDT11	SMARCA4	0.66	1
NUDT11	17p-Del	0.66	1
NUDT11	Del_15q11.2	0.66	1
RIT1	3p-Del	0.66	1
ROBO2	Amp_13q33.3	0.66	1
RPL5	3p-Del	0.66	1
SMARCA4	STK19	0.66	1
STK19	17p-Del	0.66	1
Amp_8q24.21	Del_17p13.3	0.66	1
Amp_12q14.1	Amp_13q33.3	0.66	1
Amp_12q15	Del_19p13.2	0.66	1
CDKN2A	SLAMF9	0.661	1
CDKN2A	Del_2q22.1	0.661	1
EPHA3	3p-Del	0.661	1
FTSJD1	Del_19p13.2	0.661	1
OR2L13	Amp_10p15.1	0.661	1
PDGFRA	ROBO2	0.661	1
PHKA1	17q-Amp	0.661	1
PHKA1	20p-Amp	0.661	1
PPP3CA	PRKCG	0.661	1
PPP3CA	20p-Amp	0.661	1
ROBO2	Del_17p13.3	0.661	1
SLAMF9	20p-Amp	0.661	1
17q-Amp	Del_2q22.1	0.661	1
CTNNB1	Del_3p26.2	0.662	1
CTNNB1	Del_21q11.2	0.662	1
DNMT3A	Del_21q11.2	0.662	1
FCRLA	Del_15q11.2	0.662	1
NLRP5	SMARCA4	0.662	1
SMARCA4	3q-Del	0.662	1
SMARCA4	Amp_4q12	0.662	1
SMARCA4	Del_3q11.1	0.662	1
TPTE	Del_13q34	0.662	1
17p-Del	Amp_4q12	0.662	1
Amp_1p34.3	Del_15q11.2	0.662	1
EPHB1	PIK3CA	0.663	1
NRAS	Amp_8p11.21	0.663	1
STK11	6q-Del	0.663	1
13q-Del	Amp_19q12	0.663	1
Amp_17q12	Del_9p21.3	0.663	1
CTNNB1	1p-Amp	0.664	1
CTNNB1	Del_12q24.33	0.664	1
DNMT3A	NLRP6	0.664	1
DNMT3A	1p-Amp	0.664	1
EGFR	Del_5q12.1	0.664	1
RBM10	Del_6q14.3	0.664	1
8q-Amp	Amp_19q12	0.664	1
ACVR1B	MET	0.665	1
ACVR1B	20q-Amp	0.665	1
ACVR1B	5q-Del	0.665	1
CACNA1F	MET	0.665	1
KCNQ5	MET	0.665	1
MET	PAK1	0.665	1
MET	STIM1	0.665	1
MET	ZNF608	0.665	1
MET	22q-Del	0.665	1
PAK1	5q-Del	0.665	1
STIM1	20q-Amp	0.665	1
ZNF608	5q-Del	0.665	1
20q-Amp	22q-Del	0.665	1
20q-Amp	Del_12q12	0.665	1
6q-Del	Amp_17q23.1	0.665	1
ABCB1	EPHB1	0.666	1
ABCB1	Amp_19q12	0.666	1
BRAF	GNAS	0.666	1
EGFR	Amp_4q12	0.666	1
EGFR	Del_3q11.1	0.666	1
MMP16	Del_3p21.31	0.666	1
PHKA1	Del_9p21.3	0.666	1
PIK3CA	Del_22q13.32	0.666	1
PPP3CA	18q-Del	0.666	1
SLAMF9	6q-Del	0.666	1
SLAMF9	Del_9p21.3	0.666	1
8q-Amp	Amp_4q12	0.666	1
EMG1	NLRP5	0.667	1
EMG1	Del_5q31.1	0.667	1
EMG1	Del_15q15.1	0.667	1
NLRP5	NUDT11	0.667	1
NUDT11	Del_5q31.1	0.667	1
NUDT11	Del_15q15.1	0.667	1
NUDT11	Del_16q24.3	0.667	1
SETD2	Amp_8p11.21	0.667	1
Amp_12q15	Amp_17q12	0.668	1
EPHA3	8p-Del	0.669	1
ERBB2	Del_1p36.13	0.669	1
MET	Amp_5p15.33	0.669	1
MGA	7p-Amp	0.669	1
7p-Amp	Amp_17q23.1	0.669	1
Amp_1q21.3	Del_3p21.31	0.669	1
Amp_11q13.3	Del_19p13.2	0.669	1
ABCB1	TGFBR3	0.67	1
ABCB1	19q-Del	0.67	1
ABCB1	21q-Del	0.67	1
ACVR1B	Del_13q12.11	0.67	1
ADAMTS19	Amp_12p12.1	0.67	1
BRAF	Amp_5p15.33	0.67	1
DNMT3A	Del_19p13.3	0.67	1
EPHB1	17q-Amp	0.67	1
EPHB1	20p-Amp	0.67	1
FAM65C	MMP16	0.67	1
FTSJD1	Amp_20q13.33	0.67	1
KCNQ5	Del_13q12.11	0.67	1
KCNQ5	Del_17p13.3	0.67	1
MAP2	SRPX	0.67	1
MAP2	19q-Del	0.67	1
MAP2	21q-Del	0.67	1
MMP16	SRPX	0.67	1
MMP16	TGFBR3	0.67	1
PAK1	Del_13q12.11	0.67	1
PAK1	Del_17p13.3	0.67	1
PAPPA2	9p-Del	0.67	1
STIM1	Del_17p13.3	0.67	1
TP53	17p-Del	0.67	1
17q-Amp	Del_3p21.31	0.67	1
5p-Amp	5q-Del	0.67	1
13q-Del	Del_3q29	0.67	1
19p-Del	Amp_12p12.1	0.67	1
3p-Del	Amp_20q13.33	0.67	1
6q-Del	Amp_8q24.21	0.67	1
Amp_7p11.2	Del_19q13.33	0.67	1
Amp_10p15.1	Amp_12q14.1	0.67	1
Amp_20q13.33	Del_17p13.3	0.67	1
CDKN2A	5p-Amp	0.671	1
EPHA5	Amp_6p21.1	0.671	1
NFE2L2	Del_13q34	0.671	1
STK11	Amp_14q13.3	0.671	1
FAM65C	Del_6q14.3	0.672	1
G3BP1	Del_11q23.1	0.672	1
GAGE2A	Del_11q23.1	0.672	1
GAGE2A	Del_14q32.33	0.672	1
PAPPA2	SETD2	0.672	1
PIK3CA	Del_18q21.32	0.672	1
RIT1	Del_11q23.1	0.672	1
RIT1	Del_14q32.33	0.672	1
RPL5	Del_14q32.33	0.672	1
SIP1	Amp_6p21.1	0.672	1
SLC4A3	Del_19q13.33	0.672	1
15q-Del	Amp_17q12	0.672	1
Amp_8q24.21	Del_6q14.3	0.672	1
CTNNB1	Amp_7p11.2	0.673	1
DNMT3A	Amp_7p11.2	0.673	1
LRP1B	Amp_12q14.1	0.673	1
NLGN4X	Amp_7p11.2	0.673	1
NRAS	1q-Amp	0.673	1
PRKCG	Amp_5p13.1	0.673	1
STK11	Del_3p21.31	0.673	1
STK11	Del_5q12.1	0.673	1
NLRP5	Amp_1p34.3	0.674	1
18p-Del	Del_5q31.1	0.674	1
Amp_1p34.3	Del_15q15.1	0.674	1
Amp_4q12	Del_16q24.3	0.674	1
Amp_17q12	Del_19q13.33	0.674	1
Amp_18q11.2	Del_16q24.3	0.674	1
ABCB1	FTSJD1	0.675	1
APC	Amp_12p12.1	0.675	1
ARID1A	PDGFRA	0.675	1
ARID1A	7q-Amp	0.675	1
ARID2	MAP2	0.675	1
ARID2	MMP16	0.675	1
EGFR	Del_17p13.3	0.675	1
FCRLA	Del_6q26	0.675	1
G3BP1	Del_6q14.3	0.675	1
GAGE2A	Del_6q14.3	0.675	1
PDGFRA	Del_21q11.2	0.675	1
SMAD4	Del_8p23.2	0.675	1
STRA8	Del_6q14.3	0.675	1
ZEB1	Del_21q11.2	0.675	1
7q-Amp	Del_21q11.2	0.675	1
3q-Del	Amp_5p15.33	0.675	1
Amp_1p34.3	Del_18q23	0.675	1
Amp_4q12	Del_6q26	0.675	1
Amp_5p15.33	Del_3q11.1	0.675	1
Amp_17q23.1	Del_6q14.3	0.675	1
Amp_Xq28	Del_4q34.3	0.675	1
CACNA1F	KRAS	0.676	1
EPHA5	Del_14q32.33	0.676	1
FTSJD1	KRAS	0.676	1
KRAS	22q-Del	0.676	1
NFE2L2	SRPX	0.676	1
NFE2L2	TGFBR3	0.676	1
NFE2L2	WDR66	0.676	1
NFE2L2	WT1	0.676	1
NFE2L2	19q-Del	0.676	1
NFE2L2	Del_4q22.1	0.676	1
SRPX	TCEAL5	0.676	1
SRPX	Amp_13q33.3	0.676	1
TCEAL5	TGFBR3	0.676	1
TCEAL5	WDR66	0.676	1
TCEAL5	WT1	0.676	1
TCEAL5	19q-Del	0.676	1
TCEAL5	21q-Del	0.676	1
TCEAL5	Del_4q22.1	0.676	1
19q-Del	Amp_13q33.3	0.676	1
21q-Del	Amp_13q33.3	0.676	1
Amp_13q33.3	Del_4q22.1	0.676	1
ADAMTS19	CTNNB1	0.677	1
ARID2	Del_11q23.1	0.677	1
ARID2	Del_Xp22.2	0.677	1
ATM	Del_13q34	0.677	1
CSMD3	EMG1	0.677	1
CSMD3	STK19	0.677	1
DNMT3A	19p-Del	0.677	1
DNMT3A	Del_1p13.1	0.677	1
FTSJD1	Del_Xp22.2	0.677	1
KEAP1	PDGFRA	0.677	1
KEAP1	ZEB1	0.677	1
NF1	1p-Amp	0.677	1
ROBO2	Amp_8p11.21	0.677	1
TPTE	1q-Amp	0.677	1
TPTE	Del_11q25	0.677	1
Amp_12q14.1	Del_19p13.3	0.677	1
ACVR1B	Del_3q29	0.678	1
APC	KCNQ5	0.678	1
APC	PAK1	0.678	1
APC	ZNF608	0.678	1
APC	Del_12q12	0.678	1
ERBB2	9p-Del	0.678	1
ERBB2	Del_22q13.32	0.678	1
NRAS	Amp_20q13.33	0.678	1
PAK1	Del_3q29	0.678	1
ROBO2	Del_19p13.2	0.678	1
STIM1	Amp_8p11.21	0.678	1
STIM1	Del_3q29	0.678	1
U2AF1	9p-Del	0.678	1
U2AF1	Del_22q13.32	0.678	1
ZEB1	Del_13q34	0.678	1
Amp_7q31.2	Del_6q26	0.678	1
Amp_8p11.21	Del_12q12	0.678	1
Amp_12q14.1	Del_19p13.2	0.678	1
Del_3q29	Del_12q12	0.678	1
CXCR7	PTPRU	0.679	1
CXCR7	SLC4A3	0.679	1
CXCR7	15q-Del	0.679	1
FCRLA	SLAMF9	0.679	1
FCRLA	Del_2q22.1	0.679	1
KRAS	SLC4A3	0.679	1
KRAS	TRERF1	0.679	1
KRAS	15q-Del	0.679	1
NLRP6	SLC4A3	0.679	1
NLRP6	SMAD4	0.679	1
NLRP6	Del_11p15.5	0.679	1
PHKA1	Del_3q11.1	0.679	1
PPP3CA	3q-Del	0.679	1
PPP3CA	Del_3q11.1	0.679	1
PTPRU	1p-Amp	0.679	1
SLAMF9	Amp_1p34.3	0.679	1
SLC4A3	1p-Amp	0.679	1
SMAD4	1p-Amp	0.679	1
TPTE	Amp_11q13.3	0.679	1
TRERF1	Del_12q24.33	0.679	1
1p-Amp	15q-Del	0.679	1
1p-Amp	Del_11p15.5	0.679	1
15q-Del	Del_12q24.33	0.679	1
Amp_1p34.3	Del_2q22.1	0.679	1
ARID1A	LRP1B	0.68	1
LRP1B	Amp_Xq28	0.68	1
PIK3CA	Del_16q23.1	0.68	1
13q-Del	Amp_11q13.3	0.68	1
Amp_11q13.3	Del_12p13.2	0.68	1
BRAF	FAM65C	0.681	1
BRAF	TGFBR3	0.681	1
BRAF	19q-Del	0.681	1
CTNNB1	9p-Del	0.681	1
GNAS	17p-Del	0.681	1
GNAS	Del_15q11.2	0.681	1
MGA	WDR66	0.681	1
MGA	19q-Del	0.681	1
MGA	21q-Del	0.681	1
NLRP5	Del_15q15.1	0.681	1
SRPX	Amp_3q26.2	0.681	1
SRPX	Amp_17q23.1	0.681	1
WT1	Del_9q21.11	0.681	1
7p-Amp	Del_19q13.33	0.681	1
19q-Del	Amp_3q26.2	0.681	1
LRP1B	U2AF1	0.682	1
LRP1B	Del_19p13.2	0.682	1
MET	OR2L13	0.682	1
MET	18p-Del	0.682	1
MET	Amp_18q11.2	0.682	1
PPP3CA	Amp_5p15.33	0.682	1
TP53	ZNF608	0.682	1
TP53	Del_12q12	0.682	1
U2AF1	Amp_8q24.21	0.682	1
20q-Amp	18p-Del	0.682	1
18p-Del	5q-Del	0.682	1
BRAF	Del_5q12.1	0.683	1
EMG1	EPHB1	0.683	1
EMG1	Amp_7q31.2	0.683	1
EMG1	Amp_19q12	0.683	1
EMG1	Del_3p21.31	0.683	1
EPHB1	NUDT11	0.683	1
EPHB1	STK19	0.683	1
MGA	Amp_19q12	0.683	1
NUDT11	Amp_7q31.2	0.683	1
NUDT11	Amp_19q12	0.683	1
NUDT11	Del_3p21.31	0.683	1
NUDT11	Del_5q12.1	0.683	1
PDGFRA	Del_1p36.13	0.683	1
PHKA1	Del_9p23	0.683	1
PPP3CA	Del_9p23	0.683	1
STK19	Amp_7q31.2	0.683	1
ZEB1	Del_1p36.13	0.683	1
17q-Amp	Del_16q23.1	0.683	1
21q-Del	Amp_1q21.3	0.683	1
Amp_1q21.3	Del_4q22.1	0.683	1
Amp_8p11.21	Del_19p13.3	0.683	1
Amp_17q23.1	Del_3p21.31	0.683	1
Del_2q22.1	Del_9p23	0.683	1
ADAMTS19	6q-Del	0.684	1
CACNA1F	EPHB1	0.684	1
CACNA1F	Amp_7q31.2	0.684	1
CSMD3	SRPX	0.684	1
EGFR	5q-Del	0.684	1
EPHB1	22q-Del	0.684	1
G3BP1	Del_10q26.3	0.684	1
GAGE2A	Amp_10p15.1	0.684	1
GAGE2A	Del_10q26.3	0.684	1
KRAS	Amp_12q15	0.684	1
MET	8q-Amp	0.684	1
MET	Amp_6p21.1	0.684	1
PIK3CA	Del_18q23	0.684	1
RIT1	Amp_10p15.1	0.684	1
RPL5	Del_10q26.3	0.684	1
STRA8	Amp_10p15.1	0.684	1
Amp_7q31.2	Del_10p15.3	0.684	1
Amp_19q12	Del_10p15.3	0.684	1
CDKN2A	ERBB2	0.685	1
CSMD3	1q-Amp	0.685	1
CSMD3	Del_12p13.2	0.685	1
CTNNB1	LRP1B	0.685	1
DNMT3A	LRP1B	0.685	1
EPHA3	Del_Xp22.2	0.685	1
EPHA5	PAK1	0.685	1
EPHA5	ZNF608	0.685	1
EPHA5	Del_12q12	0.685	1
ERBB2	PRKCG	0.685	1
ERBB2	20p-Amp	0.685	1
ERBB2	Amp_22q11.22	0.685	1
KEAP1	Del_15q15.1	0.685	1
NLGN4X	SIP1	0.685	1
PRKCG	U2AF1	0.685	1
U2AF1	20p-Amp	0.685	1
U2AF1	Amp_22q11.22	0.685	1
1q-Amp	Amp_22q11.22	0.685	1
Amp_5p13.1	Del_2q22.1	0.685	1
APC	22q-Del	0.686	1
APC	Del_10p15.3	0.686	1
ARID1A	SLC4A3	0.686	1
ARID1A	TRERF1	0.686	1
MAP2	Del_16q23.1	0.686	1
PPP3CA	Amp_12q15	0.686	1
PTPRU	SETD2	0.686	1
SETD2	SLC4A3	0.686	1
SETD2	TRERF1	0.686	1
SETD2	Del_11p15.5	0.686	1
SLC4A3	Del_21q11.2	0.686	1
SMAD4	Amp_Xq28	0.686	1
SMAD4	Del_3p26.2	0.686	1
SMAD4	Del_21q11.2	0.686	1
TRERF1	Amp_Xq28	0.686	1
TTN	1q-Amp	0.686	1
15q-Del	Amp_Xq28	0.686	1
Amp_5p15.33	Del_6q14.3	0.686	1
TTN	Amp_7p11.2	0.687	1
Amp_7q31.2	Del_19p13.3	0.687	1
KRAS	PPP3CA	0.688	1
KRAS	SLAMF9	0.688	1
CXCR7	Amp_14q13.3	0.689	1
EPHA3	RBM10	0.689	1
EPHA3	9q-Del	0.689	1
TPTE	Del_22q13.32	0.689	1
ZEB1	Amp_8q24.21	0.689	1
17p-Del	Amp_1q21.3	0.689	1
Amp_5p13.1	Del_9q21.11	0.689	1
ARID2	Amp_17q23.1	0.69	1
EMG1	Amp_11q13.3	0.69	1
FTSJD1	Amp_3q26.2	0.69	1
NUDT11	Amp_11q13.3	0.69	1
NUDT11	Del_16q23.1	0.69	1
STK19	Amp_11q13.3	0.69	1
3p-Del	Amp_17q23.1	0.69	1
EGFR	Amp_11q13.3	0.691	1
Amp_6p21.1	Del_21q11.2	0.691	1
Amp_11q13.3	Del_18q21.32	0.691	1
Amp_12p12.1	Del_16q24.3	0.691	1
Amp_12q15	Amp_Xq28	0.691	1
ACVR1B	CTNNB1	0.692	1
CTNNB1	KCNQ5	0.692	1
CTNNB1	PAK1	0.692	1
CTNNB1	ZNF608	0.692	1
CTNNB1	Del_12q12	0.692	1
DNMT3A	KCNQ5	0.692	1
DNMT3A	STIM1	0.692	1
DNMT3A	ZNF608	0.692	1
EPHA3	Amp_13q33.3	0.692	1
G3BP1	Del_9p21.3	0.692	1
NFE2L2	Del_19p13.2	0.692	1
PDGFRA	Del_6q14.3	0.692	1
RIT1	Del_9p21.3	0.692	1
TTN	Del_5q31.1	0.692	1
TTN	Del_15q15.1	0.692	1
9p-Del	Amp_8q24.21	0.692	1
Amp_7q31.2	Del_8p23.2	0.692	1
ACVR1B	1q-Amp	0.693	1
CTNNB1	13q-Del	0.693	1
DNMT3A	13q-Del	0.693	1
DNMT3A	Del_12p13.2	0.693	1
FAM65C	Del_15q11.2	0.693	1
MAP2	8p-Del	0.693	1
MMP16	8p-Del	0.693	1
SMARCA4	SRPX	0.693	1
SMARCA4	WT1	0.693	1
SRPX	17p-Del	0.693	1
TGFBR3	Del_15q11.2	0.693	1
WT1	17p-Del	0.693	1
ZNF608	1q-Amp	0.693	1
Amp_17q12	Del_3p26.2	0.693	1
ACVR1B	Amp_5p15.33	0.694	1
ADAMTS19	7q-Amp	0.694	1
ADAMTS19	Amp_8p11.21	0.694	1
ARID1A	1q-Amp	0.694	1
ATM	PDGFRA	0.694	1
ATM	ZEB1	0.694	1
PDGFRA	19p-Del	0.694	1
PIK3CA	Amp_12p12.1	0.694	1
TP53	Del_16q23.1	0.694	1
Amp_3q26.2	Del_9p23	0.694	1
Amp_4q12	Del_17p13.3	0.694	1
Amp_8p11.21	Del_1p13.1	0.694	1
G3BP1	8p-Del	0.695	1
PRKCG	Amp_20q13.33	0.695	1
RPL5	8p-Del	0.695	1
TPTE	Amp_20q13.33	0.695	1
17q-Amp	7p-Amp	0.695	1
20q-Amp	Del_6q26	0.695	1
Del_11q23.1	Del_Xp22.2	0.695	1
CDKN2A	KEAP1	0.696	1
CDKN2A	9q-Del	0.696	1
G3BP1	MET	0.696	1
G3BP1	20q-Amp	0.696	1
G3BP1	5q-Del	0.696	1
GAGE2A	MET	0.696	1
GAGE2A	20q-Amp	0.696	1
GAGE2A	5q-Del	0.696	1
GNAS	Del_5q31.1	0.696	1
KEAP1	17q-Amp	0.696	1
KEAP1	Amp_22q11.22	0.696	1
MET	RPL5	0.696	1
MET	STRA8	0.696	1
NFE2L2	TCEAL5	0.696	1
NFE2L2	Amp_13q33.3	0.696	1
PHKA1	ROBO2	0.696	1
PHKA1	Amp_12q14.1	0.696	1
PPP3CA	Amp_12q14.1	0.696	1
RBM10	17q-Amp	0.696	1
RBM10	Amp_22q11.22	0.696	1
RIT1	20q-Amp	0.696	1
RPL5	20q-Amp	0.696	1
20p-Amp	9q-Del	0.696	1
FAM65C	PPP3CA	0.697	1
PHKA1	SRPX	0.697	1
PHKA1	WT1	0.697	1
PHKA1	21q-Del	0.697	1
PPP3CA	SRPX	0.697	1
PPP3CA	TGFBR3	0.697	1
PPP3CA	WT1	0.697	1
SLAMF9	SRPX	0.697	1
SLAMF9	TGFBR3	0.697	1
SLAMF9	19q-Del	0.697	1
SLAMF9	21q-Del	0.697	1
SRPX	Del_2q22.1	0.697	1
WT1	Del_2q22.1	0.697	1
19q-Del	Del_2q22.1	0.697	1
21q-Del	Del_2q22.1	0.697	1
CACNA1F	Amp_5p13.1	0.698	1
EMG1	9q-Del	0.698	1
EPHA3	SIP1	0.698	1
EPHB1	Amp_1p34.3	0.698	1
EPHB1	Amp_4q12	0.698	1
FCRLA	Del_3p21.31	0.698	1
FCRLA	Del_5q12.1	0.698	1
GNAS	MET	0.698	1
KEAP1	MET	0.698	1
NUDT11	RBM10	0.698	1
NUDT11	9q-Del	0.698	1
PHKA1	STK11	0.698	1
RBM10	STK19	0.698	1
SIP1	Del_19p13.2	0.698	1
STK19	9q-Del	0.698	1
Amp_5p13.1	Del_10p15.3	0.698	1
Amp_7q31.2	Del_3q11.1	0.698	1
ACVR1B	KRAS	0.699	1
ARID1A	Amp_7p11.2	0.699	1
BRAF	PAPPA2	0.699	1
EPHA3	Del_18q23	0.699	1
KRAS	Del_12q12	0.699	1
MAP2	Del_14q32.33	0.699	1
MAP2	Del_Xp22.2	0.699	1
PAPPA2	Amp_17q23.1	0.699	1
PAPPA2	Del_9q21.11	0.699	1
7p-Amp	Del_11q23.1	0.699	1
Amp_7p11.2	Del_3p26.2	0.699	1
Amp_7p11.2	Del_21q11.2	0.699	1
Amp_20q13.33	Del_14q32.33	0.699	1
CACNA1F	Amp_11q13.3	0.7	1
CACNA1F	Del_16q23.1	0.7	1
KCNQ5	7p-Amp	0.7	1
MGA	Amp_12q15	0.7	1
PAK1	7p-Amp	0.7	1
PAK1	Amp_20q13.33	0.7	1
Amp_7p11.2	Amp_12p12.1	0.7	1
Amp_12q15	Amp_17q23.1	0.7	1
Amp_20q13.33	Del_12q12	0.7	1
Del_10p15.3	Del_16q23.1	0.7	1
ADAMTS19	PTPRU	0.701	1
ADAMTS19	SLC4A3	0.701	1
ADAMTS19	SMAD4	0.701	1
EPHB1	Del_15q11.2	0.701	1
NLRP5	1q-Amp	0.701	1
OR2L13	Del_8p23.2	0.701	1
PAPPA2	Amp_5p15.33	0.701	1
PTPRU	19p-Del	0.701	1
RB1	Del_8p23.2	0.701	1
SMAD4	19p-Del	0.701	1
SMARCA4	Del_5q12.1	0.701	1
TP53	Del_13q34	0.701	1
TRERF1	Del_1p13.1	0.701	1
TRERF1	Del_19p13.3	0.701	1
1q-Amp	Del_5q31.1	0.701	1
1q-Amp	Del_15q15.1	0.701	1
8q-Amp	22q-Del	0.701	1
APC	RB1	0.702	1
APC	Del_11q25	0.702	1
EGFR	G3BP1	0.702	1
EGFR	GAGE2A	0.702	1
EGFR	RPL5	0.702	1
EGFR	STRA8	0.702	1
ERBB2	Amp_1p34.3	0.702	1
ERBB2	Amp_4q12	0.702	1
FCRLA	U2AF1	0.702	1
G3BP1	Del_18q21.32	0.702	1
GAGE2A	8q-Amp	0.702	1
KEAP1	RB1	0.702	1
KEAP1	18p-Del	0.702	1
KEAP1	Amp_18q11.2	0.702	1
MAP2	NFE2L2	0.702	1
MMP16	NFE2L2	0.702	1
NRAS	TPTE	0.702	1
OR2L13	Del_3q29	0.702	1
RB1	Del_3q29	0.702	1
RIT1	8q-Amp	0.702	1
RIT1	Del_18q21.32	0.702	1
TTN	Del_10p15.3	0.702	1
U2AF1	3q-Del	0.702	1
U2AF1	Amp_4q12	0.702	1
8q-Amp	6q-Del	0.702	1
18p-Del	Del_3q29	0.702	1
9p-Del	Amp_19q12	0.702	1
Amp_18q11.2	Del_3q29	0.702	1
Amp_19q12	Del_22q13.32	0.702	1
BRAF	Amp_11q13.3	0.703	1
RB1	Del_19p13.3	0.703	1
3p-Del	Amp_7p11.2	0.703	1
Amp_1p34.3	Amp_8p11.21	0.703	1
Amp_8p11.21	Del_3q11.1	0.703	1
ARID2	17p-Del	0.704	1
ARID2	Del_15q11.2	0.704	1
FAM65C	Del_5q31.1	0.704	1
FAM65C	Del_15q15.1	0.704	1
LRP1B	Amp_19q12	0.704	1
MAP2	SIP1	0.704	1
NLRP5	SRPX	0.704	1
NLRP5	TGFBR3	0.704	1
NLRP5	21q-Del	0.704	1
SRPX	Del_5q31.1	0.704	1
SRPX	Del_15q15.1	0.704	1
WT1	Del_5q31.1	0.704	1
WT1	Del_16q24.3	0.704	1
Amp_1q21.3	Del_1p36.13	0.704	1
Amp_11q13.3	Del_6q26	0.704	1
CSMD3	SETD2	0.705	1
CSMD3	Del_3p26.2	0.705	1
EPHB1	18p-Del	0.705	1
EPHB1	Amp_18q11.2	0.705	1
NLGN4X	PPP3CA	0.705	1
SLAMF9	Del_13q34	0.705	1
U2AF1	18q-Del	0.705	1
18p-Del	Del_5q12.1	0.705	1
Amp_7q31.2	Del_11q25	0.705	1
Amp_18q11.2	Amp_19q12	0.705	1
ACVR1B	PTPRU	0.706	1
ACVR1B	SMAD4	0.706	1
ACVR1B	15q-Del	0.706	1
ACVR1B	Del_11p15.5	0.706	1
ARID1A	Amp_12q14.1	0.706	1
ATM	Del_13q12.11	0.706	1
EGFR	FAM65C	0.706	1
EGFR	WT1	0.706	1
EMG1	PDGFRA	0.706	1
EMG1	7q-Amp	0.706	1
FAM65C	8q-Amp	0.706	1
KCNQ5	PTPRU	0.706	1
KCNQ5	SMAD4	0.706	1
KCNQ5	TRERF1	0.706	1
NUDT11	PDGFRA	0.706	1
NUDT11	7q-Amp	0.706	1
NUDT11	Del_4q34.3	0.706	1
PAK1	TRERF1	0.706	1
PAK1	15q-Del	0.706	1
PAK1	Del_11p15.5	0.706	1
PTPRU	STIM1	0.706	1
PTPRU	ZNF608	0.706	1
PTPRU	Del_12q12	0.706	1
ROBO2	SETD2	0.706	1
ROBO2	Amp_Xq28	0.706	1
SETD2	Amp_12q14.1	0.706	1
SLC4A3	ZNF608	0.706	1
SMAD4	Del_12q12	0.706	1
SRPX	8q-Amp	0.706	1
STIM1	TRERF1	0.706	1
STIM1	15q-Del	0.706	1
STIM1	Del_11p15.5	0.706	1
STK19	ZEB1	0.706	1
STK19	Del_4q34.3	0.706	1
TRERF1	ZNF608	0.706	1
TRERF1	Del_12q12	0.706	1
WDR66	Del_18q21.32	0.706	1
WT1	8q-Amp	0.706	1
ZNF608	Del_11p15.5	0.706	1
15q-Del	Del_12q12	0.706	1
Del_11p15.5	Del_12q12	0.706	1
ARID1A	7p-Amp	0.707	1
EPHA5	Del_1p13.1	0.707	1
NLRP5	18q-Del	0.707	1
NLRP5	6q-Del	0.707	1
PIK3CA	Amp_8q24.21	0.707	1
TP53	ZEB1	0.707	1
5p-Amp	Del_5q12.1	0.707	1
7p-Amp	Amp_Xq28	0.707	1
Amp_1q21.3	Amp_12p12.1	0.707	1
CACNA1F	DNMT3A	0.708	1
CTNNB1	22q-Del	0.708	1
CTNNB1	Del_10p15.3	0.708	1
EGFR	MAP2	0.708	1
G3BP1	Del_6q26	0.708	1
G3BP1	Del_18q23	0.708	1
GAGE2A	Del_6q26	0.708	1
PIK3CA	6q-Del	0.708	1
RIT1	Amp_5p13.1	0.708	1
RIT1	Del_18q23	0.708	1
ROBO2	Del_6q14.3	0.708	1
RPL5	Amp_5p13.1	0.708	1
RPL5	Del_18q23	0.708	1
ACVR1B	Del_8p23.2	0.709	1
APC	G3BP1	0.709	1
APC	RIT1	0.709	1
APC	5p-Amp	0.709	1
CDKN2A	NLRP6	0.709	1
CDKN2A	1p-Amp	0.709	1
CDKN2A	7q-Amp	0.709	1
CDKN2A	Del_4q34.3	0.709	1
CDKN2A	Del_12q24.33	0.709	1
CXCR7	PRKCG	0.709	1
CXCR7	17q-Amp	0.709	1
G3BP1	Del_3q29	0.709	1
GAGE2A	Del_3q29	0.709	1
MAP2	5p-Amp	0.709	1
NLRP6	PRKCG	0.709	1
NLRP6	Amp_22q11.22	0.709	1
PAK1	Del_8p23.2	0.709	1
PRKCG	ZEB1	0.709	1
PRKCG	1p-Amp	0.709	1
PRKCG	Del_12q24.33	0.709	1
RIT1	Del_3q29	0.709	1
STRA8	Del_3q29	0.709	1
TTN	Del_14q32.33	0.709	1
WDR66	Amp_8q24.21	0.709	1
ZEB1	17q-Amp	0.709	1
17q-Amp	Del_12q24.33	0.709	1
1p-Amp	20p-Amp	0.709	1
20p-Amp	Del_12q24.33	0.709	1
5p-Amp	Del_3q29	0.709	1
Amp_22q11.22	Del_12q24.33	0.709	1
CXCR7	Del_19p13.3	0.71	1
FCRLA	Del_16q23.1	0.71	1
NLRP6	Del_19p13.3	0.71	1
SETD2	Del_1p36.13	0.71	1
Amp_1p34.3	Amp_11q13.3	0.71	1
Amp_1p34.3	Del_16q23.1	0.71	1
Amp_4q12	Del_16q23.1	0.71	1
Del_3q11.1	Del_16q23.1	0.71	1
ARID1A	Amp_Xq28	0.711	1
BRAF	SIP1	0.711	1
MGA	SIP1	0.711	1
ROBO2	Amp_5p15.33	0.711	1
SETD2	Amp_Xq28	0.711	1
SETD2	Del_21q11.2	0.711	1
SIP1	Amp_3q26.2	0.711	1
SIP1	Del_9q21.11	0.711	1
SMAD4	Amp_7p11.2	0.711	1
SMARCA4	Amp_5p15.33	0.711	1
WT1	Amp_14q13.3	0.711	1
17p-Del	Amp_5p15.33	0.711	1
18q-Del	Amp_5p15.33	0.711	1
19q-Del	Amp_14q13.3	0.711	1
Amp_5p15.33	Del_19p13.2	0.711	1
EPHA5	3q-Del	0.712	1
NRAS	Del_19p13.3	0.712	1
SLC4A3	Del_22q13.32	0.712	1
SMAD4	Del_22q13.32	0.712	1
Amp_6p21.1	Del_3q29	0.712	1
Amp_12q15	Del_3q29	0.712	1
Amp_14q13.3	Del_14q32.33	0.712	1
Amp_17q12	Del_1p13.1	0.712	1
ADAMTS19	Amp_12q15	0.713	1
BRAF	TCEAL5	0.713	1
BRAF	Amp_13q33.3	0.713	1
BRAF	Del_14q32.33	0.713	1
BRAF	Del_Xp22.2	0.713	1
CACNA1F	Amp_1q21.3	0.713	1
CACNA1F	Del_18q23	0.713	1
MGA	Amp_13q33.3	0.713	1
MGA	Del_14q32.33	0.713	1
STK11	Del_1p36.13	0.713	1
TCEAL5	Amp_3q26.2	0.713	1
TCEAL5	Amp_17q23.1	0.713	1
Amp_6p21.1	Del_1p13.1	0.713	1
Amp_8p11.21	Del_6q26	0.713	1
Amp_12q15	Del_1p13.1	0.713	1
Amp_13q33.3	Amp_17q23.1	0.713	1
Amp_13q33.3	Del_9q21.11	0.713	1
Amp_17q23.1	Del_14q32.33	0.713	1
Del_9q21.11	Del_11q23.1	0.713	1
EMG1	Amp_17q12	0.714	1
EMG1	Del_19q13.33	0.714	1
EPHA5	Del_18q21.32	0.714	1
GNAS	Del_6q14.3	0.714	1
NLRP6	PAPPA2	0.714	1
NUDT11	Amp_17q12	0.714	1
NUDT11	Del_19q13.33	0.714	1
PDGFRA	Del_12p13.2	0.714	1
PIK3CA	Del_4q34.3	0.714	1
STK19	Amp_17q12	0.714	1
STK19	Del_19q13.33	0.714	1
Amp_10p15.1	Del_14q32.33	0.714	1
Amp_13q33.3	Del_6q14.3	0.714	1
Del_10q26.3	Del_14q32.33	0.714	1
ARID2	5q-Del	0.715	1
ATM	PPP3CA	0.715	1
ATM	Del_2q22.1	0.715	1
NFE2L2	PHKA1	0.715	1
NFE2L2	Del_2q22.1	0.715	1
PIK3CA	SLC4A3	0.715	1
PPP3CA	TCEAL5	0.715	1
PPP3CA	Amp_13q33.3	0.715	1
SLAMF9	Amp_13q33.3	0.715	1
SLC4A3	Del_12p13.2	0.715	1
SMAD4	13q-Del	0.715	1
SRPX	Del_6q26	0.715	1
TCEAL5	Del_2q22.1	0.715	1
WDR66	Del_6q26	0.715	1
WT1	Del_6q26	0.715	1
WT1	Del_18q23	0.715	1
20q-Amp	3p-Del	0.715	1
19q-Del	Del_18q23	0.715	1
21q-Del	Del_18q23	0.715	1
Amp_13q33.3	Del_2q22.1	0.715	1
DNMT3A	18q-Del	0.716	1
MET	Del_13q12.11	0.716	1
MGA	NF1	0.716	1
NF1	Amp_3q26.2	0.716	1
OR2L13	Del_22q13.32	0.716	1
RB1	9p-Del	0.716	1
RBM10	8q-Amp	0.716	1
RBM10	Del_18q21.32	0.716	1
SRPX	TP53	0.716	1
1q-Amp	8p-Del	0.716	1
20q-Amp	Del_17p13.3	0.716	1
5p-Amp	Amp_4q12	0.716	1
8q-Amp	9q-Del	0.716	1
18p-Del	Del_22q13.32	0.716	1
CACNA1F	9q-Del	0.717	1
NRAS	9p-Del	0.717	1
OR2L13	Amp_5p15.33	0.717	1
RBM10	22q-Del	0.717	1
RBM10	Del_10p15.3	0.717	1
SIP1	SMARCA4	0.717	1
Amp_5p15.33	Amp_18q11.2	0.717	1
EPHB1	Del_5q31.1	0.718	1
EPHB1	Del_15q15.1	0.718	1
EPHB1	Del_16q24.3	0.718	1
GAGE2A	LRP1B	0.718	1
LRP1B	RIT1	0.718	1
NLRP5	Del_3p21.31	0.718	1
NLRP6	9p-Del	0.718	1
TPTE	Del_18q21.32	0.718	1
1p-Amp	9p-Del	0.718	1
1q-Amp	Del_10q26.3	0.718	1
8p-Del	Amp_18q11.2	0.718	1
Amp_7q31.2	Del_5q31.1	0.718	1
Amp_12p12.1	Del_10p15.3	0.718	1
APC	GNAS	0.719	1
ARID2	Del_5q31.1	0.719	1
ERBB2	FAM65C	0.719	1
ERBB2	WDR66	0.719	1
ERBB2	WT1	0.719	1
ERBB2	19q-Del	0.719	1
ERBB2	21q-Del	0.719	1
ERBB2	Del_4q22.1	0.719	1
FAM65C	U2AF1	0.719	1
SRPX	U2AF1	0.719	1
TGFBR3	U2AF1	0.719	1
U2AF1	WDR66	0.719	1
U2AF1	19q-Del	0.719	1
U2AF1	21q-Del	0.719	1
U2AF1	Del_4q22.1	0.719	1
17p-Del	Amp_6p21.1	0.719	1
ACVR1B	Del_1p36.13	0.72	1
EPHB1	Amp_8p11.21	0.72	1
KCNQ5	Del_1p36.13	0.72	1
PAK1	Del_1p36.13	0.72	1
STK11	Del_9q21.11	0.72	1
ZNF608	Del_1p36.13	0.72	1
17p-Del	Amp_11q13.3	0.72	1
CTNNB1	GAGE2A	0.721	1
CTNNB1	RPL5	0.721	1
CTNNB1	STRA8	0.721	1
DNMT3A	G3BP1	0.721	1
DNMT3A	GAGE2A	0.721	1
DNMT3A	RIT1	0.721	1
DNMT3A	RPL5	0.721	1
DNMT3A	STRA8	0.721	1
FCRLA	1q-Amp	0.721	1
NLGN4X	Del_3p26.2	0.721	1
OR2L13	Del_16q23.1	0.721	1
PAPPA2	7p-Amp	0.721	1
Amp_11q13.3	Amp_18q11.2	0.721	1
Del_13q34	Del_21q11.2	0.721	1
ABCB1	Del_6q26	0.722	1
ARID1A	EMG1	0.722	1
ARID1A	NUDT11	0.722	1
ARID1A	STK19	0.722	1
BRAF	RBM10	0.722	1
BRAF	9q-Del	0.722	1
EMG1	Amp_Xq28	0.722	1
EMG1	Del_3p26.2	0.722	1
EMG1	Del_21q11.2	0.722	1
G3BP1	Del_17p13.3	0.722	1
KRAS	PDGFRA	0.722	1
KRAS	ZEB1	0.722	1
MAP2	Del_18q23	0.722	1
NUDT11	SETD2	0.722	1
NUDT11	Amp_Xq28	0.722	1
NUDT11	Del_3p26.2	0.722	1
NUDT11	Del_21q11.2	0.722	1
PRKCG	Amp_17q12	0.722	1
RIT1	Del_17p13.3	0.722	1
RPL5	Del_13q12.11	0.722	1
SETD2	STK19	0.722	1
ERBB2	Amp_12q15	0.723	1
FCRLA	9q-Del	0.723	1
KRAS	9p-Del	0.723	1
MAP2	Amp_10p15.1	0.723	1
NF1	PAK1	0.723	1
NF1	ZNF608	0.723	1
NF1	Del_12q12	0.723	1
SMARCA4	TCEAL5	0.723	1
SMARCA4	Amp_13q33.3	0.723	1
U2AF1	Amp_12q15	0.723	1
9q-Del	Amp_1p34.3	0.723	1
Del_9p21.3	Del_10q26.3	0.723	1
APC	ROBO2	0.724	1
CDKN2A	NF1	0.724	1
EPHB1	Amp_7p11.2	0.724	1
NF1	20p-Amp	0.724	1
SIP1	Del_5q31.1	0.724	1
SIP1	Del_15q15.1	0.724	1
Amp_12q14.1	Del_3q29	0.724	1
APC	Amp_5p15.33	0.725	1
CXCR7	3q-Del	0.725	1
CXCR7	Amp_1p34.3	0.725	1
CXCR7	Amp_4q12	0.725	1
EPHA3	PHKA1	0.725	1
EPHA3	PPP3CA	0.725	1
FCRLA	NLRP6	0.725	1
FCRLA	1p-Amp	0.725	1
FCRLA	Del_12q24.33	0.725	1
KRAS	Amp_18q11.2	0.725	1
NLRP6	3q-Del	0.725	1
NLRP6	Amp_4q12	0.725	1
NLRP6	Del_3q11.1	0.725	1
PHKA1	Del_19p13.2	0.725	1
PPP3CA	Del_19p13.2	0.725	1
ROBO2	7p-Amp	0.725	1
SLAMF9	Del_19p13.2	0.725	1
1p-Amp	Amp_4q12	0.725	1
Amp_1p34.3	Del_12q24.33	0.725	1
Amp_5p15.33	Del_3q29	0.725	1
Amp_11q13.3	Del_8p23.2	0.725	1
ABCB1	ZEB1	0.726	1
GNAS	Del_5q12.1	0.726	1
MAP2	ZEB1	0.726	1
MMP16	7q-Amp	0.726	1
TPTE	7q-Amp	0.726	1
3q-Del	Amp_5p13.1	0.726	1
Amp_1p34.3	Amp_5p13.1	0.726	1
APC	Del_18q23	0.727	1
EPHB1	FAM65C	0.727	1
EPHB1	SRPX	0.727	1
EPHB1	TGFBR3	0.727	1
EPHB1	19q-Del	0.727	1
FAM65C	Del_3p21.31	0.727	1
FAM65C	Del_5q12.1	0.727	1
FTSJD1	Amp_8q24.21	0.727	1
NRAS	Amp_12p12.1	0.727	1
SRPX	Amp_7q31.2	0.727	1
SRPX	Amp_19q12	0.727	1
SRPX	Del_3p21.31	0.727	1
SRPX	Del_5q12.1	0.727	1
WT1	Amp_7q31.2	0.727	1
WT1	Del_3p21.31	0.727	1
WT1	Del_5q12.1	0.727	1
17p-Del	Del_Xp22.2	0.727	1
18q-Del	Amp_12q15	0.727	1
21q-Del	Amp_7q31.2	0.727	1
21q-Del	Amp_19q12	0.727	1
ADAMTS19	Amp_12q14.1	0.728	1
G3BP1	Amp_8p11.21	0.728	1
LRP1B	Del_17p13.3	0.728	1
PHKA1	Amp_7p11.2	0.728	1
ROBO2	19p-Del	0.728	1
Amp_12q14.1	Del_1p13.1	0.728	1
ADAMTS19	Del_3p26.2	0.729	1
ADAMTS19	Del_21q11.2	0.729	1
EGFR	18p-Del	0.729	1
ERBB2	Del_9p21.3	0.729	1
RBM10	Del_18q23	0.729	1
STK11	Amp_10p15.1	0.729	1
STK11	Del_10q26.3	0.729	1
ADAMTS19	EMG1	0.73	1
ADAMTS19	NUDT11	0.73	1
ADAMTS19	STK19	0.73	1
CACNA1F	PTPRU	0.73	1
CACNA1F	15q-Del	0.73	1
CACNA1F	Del_11p15.5	0.73	1
EMG1	19p-Del	0.73	1
EMG1	Del_1p13.1	0.73	1
EPHA3	Amp_14q13.3	0.73	1
FCRLA	7p-Amp	0.73	1
NUDT11	19p-Del	0.73	1
NUDT11	Del_1p13.1	0.73	1
PTPRU	22q-Del	0.73	1
SMAD4	Del_10p15.3	0.73	1
STK19	19p-Del	0.73	1
STK19	Del_1p13.1	0.73	1
TRERF1	22q-Del	0.73	1
1q-Amp	Del_13q34	0.73	1
7p-Amp	3q-Del	0.73	1
3q-Del	Amp_20q13.33	0.73	1
Amp_20q13.33	Del_3q11.1	0.73	1
BRAF	Del_18q21.32	0.731	1
EGFR	MGA	0.731	1
Amp_5p13.1	Del_3p26.2	0.731	1
ABCB1	ATM	0.732	1
ATM	MAP2	0.732	1
EPHA5	Del_6q26	0.732	1
ERBB2	Amp_12q14.1	0.732	1
FAM65C	Del_13q12.11	0.732	1
FAM65C	Del_17p13.3	0.732	1
NLRP6	5p-Amp	0.732	1
PAPPA2	9q-Del	0.732	1
TGFBR3	Del_13q12.11	0.732	1
U2AF1	Amp_12q14.1	0.732	1
U2AF1	Del_9p23	0.732	1
20q-Amp	Del_14q32.33	0.732	1
20q-Amp	Del_Xp22.2	0.732	1
Amp_7q31.2	Amp_12p12.1	0.732	1
Amp_12p12.1	Del_5q12.1	0.732	1
Amp_20q13.33	Del_1p13.1	0.732	1
CACNA1F	7q-Amp	0.733	1
EPHA5	13q-Del	0.733	1
NRAS	18q-Del	0.733	1
NRAS	6q-Del	0.733	1
PDGFRA	Del_10p15.3	0.733	1
SLC4A3	Amp_12p12.1	0.733	1
ACVR1B	CDKN2A	0.734	1
ACVR1B	PRKCG	0.734	1
ACVR1B	17q-Amp	0.734	1
CDKN2A	KCNQ5	0.734	1
CDKN2A	PAK1	0.734	1
CDKN2A	STIM1	0.734	1
CDKN2A	ZNF608	0.734	1
CDKN2A	Del_12q12	0.734	1
EPHA5	Amp_19q12	0.734	1
G3BP1	SLC4A3	0.734	1
G3BP1	SMAD4	0.734	1
G3BP1	TRERF1	0.734	1
G3BP1	15q-Del	0.734	1
GAGE2A	PTPRU	0.734	1
GAGE2A	SLC4A3	0.734	1
GAGE2A	TRERF1	0.734	1
GAGE2A	15q-Del	0.734	1
GAGE2A	Del_11p15.5	0.734	1
KCNQ5	17q-Amp	0.734	1
KCNQ5	20p-Amp	0.734	1
KCNQ5	Amp_22q11.22	0.734	1
NF1	Del_14q32.33	0.734	1
NFE2L2	Del_5q31.1	0.734	1
NFE2L2	Del_16q24.3	0.734	1
NLGN4X	Del_9p23	0.734	1
PAK1	PRKCG	0.734	1
PAK1	17q-Amp	0.734	1
PAK1	20p-Amp	0.734	1
PAK1	Amp_22q11.22	0.734	1
PHKA1	PPP3CA	0.734	1
PPP3CA	SLAMF9	0.734	1
PPP3CA	Del_2q22.1	0.734	1
PRKCG	ZNF608	0.734	1
PTPRU	RIT1	0.734	1
PTPRU	RPL5	0.734	1
RIT1	SLC4A3	0.734	1
RIT1	SMAD4	0.734	1
RIT1	TRERF1	0.734	1
RIT1	Del_11p15.5	0.734	1
RPL5	SLC4A3	0.734	1
RPL5	SMAD4	0.734	1
RPL5	15q-Del	0.734	1
RPL5	Del_11p15.5	0.734	1
SMAD4	STRA8	0.734	1
STIM1	20p-Amp	0.734	1
STRA8	15q-Del	0.734	1
STRA8	Del_11p15.5	0.734	1
ZNF608	17q-Amp	0.734	1
ZNF608	20p-Amp	0.734	1
ZNF608	Amp_22q11.22	0.734	1
20p-Amp	Del_12q12	0.734	1
Amp_22q11.22	Del_12q12	0.734	1
ABCB1	PHKA1	0.735	1
APC	3p-Del	0.735	1
ARID1A	Amp_22q11.22	0.735	1
ARID2	Del_3q29	0.735	1
CDKN2A	Amp_Xq28	0.735	1
EPHA5	GAGE2A	0.735	1
MAP2	Del_2q22.1	0.735	1
PDGFRA	3q-Del	0.735	1
PDGFRA	Del_3q11.1	0.735	1
SETD2	17q-Amp	0.735	1
TP53	Del_16q24.3	0.735	1
ZEB1	3q-Del	0.735	1
ZEB1	Amp_1p34.3	0.735	1
ZEB1	Amp_4q12	0.735	1
ZEB1	Del_3q11.1	0.735	1
17q-Amp	Del_3p26.2	0.735	1
20q-Amp	Del_19p13.2	0.735	1
7q-Amp	3q-Del	0.735	1
7q-Amp	Del_3q11.1	0.735	1
Amp_1p34.3	Del_4q34.3	0.735	1
Amp_7p11.2	Del_Xp22.2	0.735	1
Amp_22q11.22	Del_21q11.2	0.735	1
Del_3q29	Del_13q34	0.735	1
ATM	SETD2	0.736	1
CACNA1F	Del_13q12.11	0.736	1
CDKN2A	Del_9p23	0.736	1
EPHA5	Del_8p23.2	0.736	1
ERBB2	NFE2L2	0.736	1
ERBB2	TCEAL5	0.736	1
LRP1B	Del_5q31.1	0.736	1
NFE2L2	U2AF1	0.736	1
PIK3CA	Amp_12q15	0.736	1
RB1	RBM10	0.736	1
RB1	9q-Del	0.736	1
RBM10	18p-Del	0.736	1
ROBO2	17p-Del	0.736	1
STK11	Amp_12q14.1	0.736	1
U2AF1	Amp_13q33.3	0.736	1
17q-Amp	Del_9p23	0.736	1
5p-Amp	Del_9q21.11	0.736	1
9q-Del	Amp_18q11.2	0.736	1
Amp_11q13.3	Del_5q31.1	0.736	1
EPHB1	SIP1	0.737	1
PAK1	TPTE	0.737	1
ROBO2	5p-Amp	0.737	1
SIP1	Amp_7q31.2	0.737	1
SIP1	Amp_19q12	0.737	1
SIP1	Del_3p21.31	0.737	1
5p-Amp	Del_1p13.1	0.737	1
FAM65C	Del_16q23.1	0.738	1
KEAP1	SETD2	0.738	1
KRAS	Del_1p36.13	0.738	1
NFE2L2	8p-Del	0.738	1
PIK3CA	Del_1p36.13	0.738	1
SRPX	Del_16q23.1	0.738	1
WT1	Del_16q23.1	0.738	1
19q-Del	Amp_11q13.3	0.738	1
8p-Del	Amp_13q33.3	0.738	1
Amp_11q13.3	Del_4q22.1	0.738	1
CTNNB1	GNAS	0.739	1
CTNNB1	Amp_12q15	0.739	1
EMG1	13q-Del	0.739	1
EMG1	Del_12p13.2	0.739	1
NUDT11	PIK3CA	0.739	1
NUDT11	13q-Del	0.739	1
NUDT11	Del_12p13.2	0.739	1
PAPPA2	PIK3CA	0.739	1
PAPPA2	13q-Del	0.739	1
PAPPA2	Del_12p13.2	0.739	1
PIK3CA	STK19	0.739	1
STK19	Del_12p13.2	0.739	1
Amp_12q15	Del_16q24.3	0.739	1
DNMT3A	8p-Del	0.74	1
FAM65C	PAPPA2	0.74	1
BRAF	Del_4q34.3	0.741	1
CXCR7	FAM65C	0.741	1
CXCR7	WT1	0.741	1
CXCR7	19q-Del	0.741	1
CXCR7	21q-Del	0.741	1
CXCR7	Del_4q22.1	0.741	1
FAM65C	NLRP6	0.741	1
FAM65C	1p-Amp	0.741	1
FAM65C	Amp_5p15.33	0.741	1
FAM65C	Del_12q24.33	0.741	1
GNAS	Del_22q13.32	0.741	1
MGA	ZEB1	0.741	1
MGA	Del_4q34.3	0.741	1
NLGN4X	U2AF1	0.741	1
NLRP5	Del_Xp22.2	0.741	1
NLRP6	SRPX	0.741	1
NLRP6	WT1	0.741	1
NLRP6	19q-Del	0.741	1
PDGFRA	Amp_3q26.2	0.741	1
SRPX	1p-Amp	0.741	1
SRPX	Del_12q24.33	0.741	1
TGFBR3	1p-Amp	0.741	1
TGFBR3	Del_12q24.33	0.741	1
WDR66	1p-Amp	0.741	1
WDR66	Del_12q24.33	0.741	1
WT1	Amp_5p15.33	0.741	1
WT1	Del_12q24.33	0.741	1
ZEB1	Amp_3q26.2	0.741	1
1p-Amp	21q-Del	0.741	1
1p-Amp	Del_4q22.1	0.741	1
7q-Amp	Amp_3q26.2	0.741	1
21q-Del	Amp_5p15.33	0.741	1
9p-Del	Amp_14q13.3	0.741	1
Amp_5p15.33	Del_4q22.1	0.741	1
EPHB1	KEAP1	0.742	1
G3BP1	1q-Amp	0.742	1
NLGN4X	19p-Del	0.742	1
PDGFRA	8q-Amp	0.742	1
RB1	Amp_12p12.1	0.742	1
TTN	Amp_12q14.1	0.742	1
7q-Amp	Del_18q21.32	0.742	1
CDKN2A	TPTE	0.743	1
CXCR7	6q-Del	0.743	1
NFE2L2	TTN	0.743	1
NLRP6	6q-Del	0.743	1
NRAS	Amp_6p21.1	0.743	1
NRAS	Amp_12q15	0.743	1
PAPPA2	Del_13q12.11	0.743	1
PPP3CA	TP53	0.743	1
STK11	22q-Del	0.743	1
STK11	Del_10p15.3	0.743	1
TPTE	20p-Amp	0.743	1
TTN	Amp_13q33.3	0.743	1
1p-Amp	18q-Del	0.743	1
6q-Del	Del_12q24.33	0.743	1
DNMT3A	TP53	0.744	1
MET	Del_9p23	0.744	1
PTPRU	18p-Del	0.744	1
PTPRU	Amp_18q11.2	0.744	1
PTPRU	Del_11q25	0.744	1
RB1	SMAD4	0.744	1
RB1	Del_11p15.5	0.744	1
SLC4A3	18p-Del	0.744	1
SLC4A3	6q-Del	0.744	1
SLC4A3	Del_11q25	0.744	1
SMAD4	6q-Del	0.744	1
TRERF1	18p-Del	0.744	1
TRERF1	18q-Del	0.744	1
TRERF1	6q-Del	0.744	1
Amp_5p13.1	Del_9p21.3	0.744	1
Amp_8p11.21	Amp_12p12.1	0.744	1
ABCB1	Del_19q13.33	0.745	1
BRAF	PHKA1	0.745	1
BRAF	PPP3CA	0.745	1
EGFR	Amp_6p21.1	0.745	1
EMG1	Amp_14q13.3	0.745	1
MGA	Del_2q22.1	0.745	1
MGA	Del_6q26	0.745	1
MMP16	Amp_17q12	0.745	1
NLGN4X	7p-Amp	0.745	1
PHKA1	Amp_3q26.2	0.745	1
PHKA1	Amp_17q23.1	0.745	1
PPP3CA	Amp_17q23.1	0.745	1
PPP3CA	Del_9q21.11	0.745	1
RBM10	9p-Del	0.745	1
RBM10	Del_22q13.32	0.745	1
ROBO2	18q-Del	0.745	1
SLAMF9	Del_9q21.11	0.745	1
STK11	Del_15q11.2	0.745	1
1q-Amp	13q-Del	0.745	1
8q-Amp	Amp_12q15	0.745	1
Amp_20q13.33	Del_13q34	0.745	1
ADAMTS19	19p-Del	0.746	1
ARID1A	NF1	0.746	1
EGFR	Amp_13q33.3	0.746	1
ERBB2	Amp_5p13.1	0.746	1
SLC4A3	Del_6q14.3	0.746	1
SMAD4	Del_6q14.3	0.746	1
8q-Amp	Amp_13q33.3	0.746	1
Amp_13q33.3	Del_18q21.32	0.746	1
Amp_Xq28	Del_6q14.3	0.746	1
ARID1A	PIK3CA	0.747	1
ARID1A	13q-Del	0.747	1
ARID2	Amp_7q31.2	0.747	1
ARID2	Del_5q12.1	0.747	1
CACNA1F	EMG1	0.747	1
CACNA1F	NUDT11	0.747	1
EMG1	22q-Del	0.747	1
EMG1	Del_10p15.3	0.747	1
EPHB1	18q-Del	0.747	1
FTSJD1	Del_3p21.31	0.747	1
FTSJD1	Del_5q12.1	0.747	1
G3BP1	Del_1p36.13	0.747	1
GAGE2A	Del_1p36.13	0.747	1
KRAS	21q-Del	0.747	1
KRAS	Del_4q22.1	0.747	1
MET	MMP16	0.747	1
NUDT11	22q-Del	0.747	1
NUDT11	Del_10p15.3	0.747	1
PIK3CA	Del_21q11.2	0.747	1
RIT1	Del_1p36.13	0.747	1
RPL5	Del_1p36.13	0.747	1
SETD2	Del_12p13.2	0.747	1
STK19	22q-Del	0.747	1
STK19	Del_10p15.3	0.747	1
1q-Amp	5q-Del	0.747	1
8q-Amp	Del_18q21.32	0.747	1
3p-Del	Amp_7q31.2	0.747	1
6q-Del	Amp_7q31.2	0.747	1
Amp_1p34.3	Amp_17q12	0.747	1
Amp_4q12	Del_19q13.33	0.747	1
Amp_5p13.1	Amp_12q15	0.747	1
ADAMTS19	CDKN2A	0.748	1
ADAMTS19	20p-Amp	0.748	1
CACNA1F	Amp_8q24.21	0.748	1
CDKN2A	19p-Del	0.748	1
CDKN2A	Del_1p13.1	0.748	1
G3BP1	Amp_20q13.33	0.748	1
LRP1B	Del_16q23.1	0.748	1
NRAS	ROBO2	0.748	1
NRAS	Amp_12q14.1	0.748	1
PAK1	Amp_14q13.3	0.748	1
PRKCG	19p-Del	0.748	1
PRKCG	Del_1p13.1	0.748	1
RIT1	7p-Amp	0.748	1
RPL5	7p-Amp	0.748	1
RPL5	Amp_20q13.33	0.748	1
SIP1	Del_9p21.3	0.748	1
TPTE	Amp_17q12	0.748	1
17q-Amp	19p-Del	0.748	1
20p-Amp	Del_1p13.1	0.748	1
Amp_8q24.21	Amp_11q13.3	0.748	1
Amp_8q24.21	Del_10p15.3	0.748	1
ACVR1B	3q-Del	0.749	1
ACVR1B	Amp_1p34.3	0.749	1
ACVR1B	Amp_4q12	0.749	1
ACVR1B	Del_3q11.1	0.749	1
ATM	ERBB2	0.749	1
ATM	U2AF1	0.749	1
CACNA1F	Amp_17q12	0.749	1
CTNNB1	EGFR	0.749	1
EPHA5	SRPX	0.749	1
EPHA5	Del_4q22.1	0.749	1
FCRLA	PAK1	0.749	1
FCRLA	ZNF608	0.749	1
FCRLA	Del_12q12	0.749	1
KCNQ5	3q-Del	0.749	1
KCNQ5	Amp_1p34.3	0.749	1
KCNQ5	Amp_4q12	0.749	1
KCNQ5	Del_3q11.1	0.749	1
MET	Del_10q26.3	0.749	1
PAK1	3q-Del	0.749	1
PAK1	Del_3q11.1	0.749	1
PIK3CA	ROBO2	0.749	1
RBM10	SRPX	0.749	1
RBM10	21q-Del	0.749	1
ROBO2	Del_12p13.2	0.749	1
SMARCA4	Amp_10p15.1	0.749	1
SMARCA4	Del_10q26.3	0.749	1
SRPX	9q-Del	0.749	1
STIM1	3q-Del	0.749	1
STIM1	Amp_1p34.3	0.749	1
STIM1	Del_3q11.1	0.749	1
TGFBR3	9q-Del	0.749	1
WDR66	9q-Del	0.749	1
WT1	9q-Del	0.749	1
ZNF608	Amp_4q12	0.749	1
ZNF608	Del_3q11.1	0.749	1
3q-Del	Del_12q12	0.749	1
Amp_1p34.3	Del_12q12	0.749	1
Amp_4q12	Del_12q12	0.749	1
Amp_12q14.1	Del_12p13.2	0.749	1
ABCB1	Del_13q12.11	0.75	1
CTNNB1	ROBO2	0.75	1
CXCR7	Amp_8q24.21	0.75	1
RBM10	SIP1	0.75	1
SIP1	9q-Del	0.75	1
Amp_5p13.1	Del_19p13.2	0.75	1
Amp_8q24.21	Del_12q24.33	0.75	1
APC	Del_11q23.1	0.751	1
NF1	Amp_6p21.1	0.751	1
TP53	18p-Del	0.751	1
1q-Amp	Del_9p21.3	0.751	1
Del_3q29	Del_14q32.33	0.751	1
EPHB1	Del_5q12.1	0.752	1
KCNQ5	Del_19p13.3	0.752	1
PDGFRA	RB1	0.752	1
PDGFRA	Del_11q25	0.752	1
RB1	7q-Amp	0.752	1
STIM1	Del_19p13.3	0.752	1
STK11	Amp_22q11.22	0.752	1
ZNF608	Del_19p13.3	0.752	1
7p-Amp	Del_18q21.32	0.752	1
Amp_7q31.2	Del_5q12.1	0.752	1
Del_1p36.13	Del_10p15.3	0.752	1
Amp_11q13.3	Amp_12p12.1	0.753	1
ATM	LRP1B	0.754	1
DNMT3A	FTSJD1	0.754	1
EGFR	17p-Del	0.754	1
ERBB2	PHKA1	0.754	1
ERBB2	PPP3CA	0.754	1
ERBB2	Del_2q22.1	0.754	1
OR2L13	6q-Del	0.754	1
PDGFRA	Del_18q23	0.754	1
PHKA1	U2AF1	0.754	1
PHKA1	17p-Del	0.754	1
PPP3CA	SMARCA4	0.754	1
ROBO2	Del_5q31.1	0.754	1
SLAMF9	U2AF1	0.754	1
TTN	Amp_11q13.3	0.754	1
U2AF1	Del_2q22.1	0.754	1
ZEB1	Del_18q23	0.754	1
18q-Del	Amp_18q11.2	0.754	1
6q-Del	Amp_18q11.2	0.754	1
Amp_12q14.1	Del_16q24.3	0.754	1
EMG1	OR2L13	0.755	1
EMG1	RB1	0.755	1
EMG1	18p-Del	0.755	1
EMG1	Amp_18q11.2	0.755	1
EMG1	Del_11q25	0.755	1
EPHB1	NFE2L2	0.755	1
NUDT11	RB1	0.755	1
NUDT11	18p-Del	0.755	1
NUDT11	Amp_18q11.2	0.755	1
OR2L13	STK19	0.755	1
RB1	STK19	0.755	1
STK19	18p-Del	0.755	1
STK19	Amp_18q11.2	0.755	1
STK19	Del_11q25	0.755	1
TCEAL5	Amp_7q31.2	0.755	1
TCEAL5	Del_3p21.31	0.755	1
18p-Del	Amp_1q21.3	0.755	1
EPHA5	Amp_11q13.3	0.756	1
TPTE	Del_11q23.1	0.756	1
TTN	U2AF1	0.756	1
13q-Del	Amp_7p11.2	0.756	1
CACNA1F	Amp_6p21.1	0.757	1
CXCR7	NFE2L2	0.757	1
CXCR7	Amp_13q33.3	0.757	1
NF1	Amp_1p34.3	0.757	1
NFE2L2	NLRP6	0.757	1
NFE2L2	1p-Amp	0.757	1
NFE2L2	Del_12q24.33	0.757	1
NLRP6	TCEAL5	0.757	1
NLRP6	Amp_13q33.3	0.757	1
PDGFRA	SIP1	0.757	1
PHKA1	Del_6q14.3	0.757	1
PPP3CA	Del_6q14.3	0.757	1
SIP1	7q-Amp	0.757	1
SIP1	Del_4q34.3	0.757	1
SMARCA4	ZEB1	0.757	1
TCEAL5	1p-Amp	0.757	1
WDR66	1q-Amp	0.757	1
WT1	1q-Amp	0.757	1
ZEB1	Del_15q11.2	0.757	1
13q-Del	Amp_20q13.33	0.757	1
22q-Del	Amp_6p21.1	0.757	1
Amp_12q15	Del_10p15.3	0.757	1
Amp_13q33.3	Del_12q24.33	0.757	1
EPHA3	U2AF1	0.758	1
KEAP1	Amp_8q24.21	0.758	1
NF1	Del_5q31.1	0.758	1
NF1	Del_15q15.1	0.758	1
TPTE	Del_9p23	0.758	1
20p-Amp	Amp_1q21.3	0.758	1
ABCB1	KRAS	0.759	1
ARID1A	FCRLA	0.759	1
ARID1A	Amp_4q12	0.759	1
ARID1A	Del_3q11.1	0.759	1
BRAF	MET	0.759	1
CXCR7	Amp_6p21.1	0.759	1
DNMT3A	Del_18q23	0.759	1
GNAS	15q-Del	0.759	1
SETD2	3q-Del	0.759	1
WDR66	Del_9p21.3	0.759	1
20q-Amp	Amp_17q23.1	0.759	1
3q-Del	Amp_Xq28	0.759	1
Amp_1p34.3	Del_3p26.2	0.759	1
Amp_1p34.3	Del_21q11.2	0.759	1
Amp_5p15.33	Del_12p13.2	0.759	1
Amp_Xq28	Del_3q11.1	0.759	1
BRAF	Amp_17q12	0.76	1
BRAF	Del_19q13.33	0.76	1
CDKN2A	GAGE2A	0.76	1
CDKN2A	PIK3CA	0.76	1
CDKN2A	RIT1	0.76	1
CDKN2A	RPL5	0.76	1
CDKN2A	STRA8	0.76	1
CDKN2A	Del_12p13.2	0.76	1
EPHA5	STK11	0.76	1
G3BP1	17q-Amp	0.76	1
G3BP1	20p-Amp	0.76	1
G3BP1	Amp_22q11.22	0.76	1
GAGE2A	17q-Amp	0.76	1
GAGE2A	20p-Amp	0.76	1
GAGE2A	Amp_22q11.22	0.76	1
NLGN4X	STK11	0.76	1
PIK3CA	Amp_22q11.22	0.76	1
PRKCG	RPL5	0.76	1
PRKCG	STRA8	0.76	1
RIT1	17q-Amp	0.76	1
RIT1	20p-Amp	0.76	1
RIT1	Amp_22q11.22	0.76	1
RPL5	17q-Amp	0.76	1
RPL5	20p-Amp	0.76	1
STRA8	17q-Amp	0.76	1
TCEAL5	Amp_14q13.3	0.76	1
ZNF608	Del_22q13.32	0.76	1
20p-Amp	13q-Del	0.76	1
7p-Amp	Del_3p21.31	0.76	1
Amp_1q21.3	Del_9p21.3	0.76	1
Amp_3q26.2	Del_19q13.33	0.76	1
Amp_17q23.1	Del_19q13.33	0.76	1
Del_12q12	Del_22q13.32	0.76	1
DNMT3A	Del_13q34	0.761	1
FAM65C	PDGFRA	0.761	1
FAM65C	ZEB1	0.761	1
FAM65C	5p-Amp	0.761	1
FAM65C	Del_4q34.3	0.761	1
NF1	Amp_10p15.1	0.761	1
PDGFRA	TGFBR3	0.761	1
PDGFRA	WT1	0.761	1
SRPX	7q-Amp	0.761	1
SRPX	Del_4q34.3	0.761	1
TP53	Del_9p21.3	0.761	1
WT1	7q-Amp	0.761	1
WT1	Del_4q34.3	0.761	1
ZEB1	21q-Del	0.761	1
7q-Amp	19q-Del	0.761	1
CDKN2A	Del_19p13.3	0.762	1
EMG1	PAPPA2	0.762	1
NUDT11	PAPPA2	0.762	1
OR2L13	Del_13q12.11	0.762	1
17q-Amp	Del_19p13.3	0.762	1
20p-Amp	Del_19p13.3	0.762	1
5p-Amp	17p-Del	0.762	1
Amp_18q11.2	Del_17p13.3	0.762	1
Del_10q26.3	Del_16q24.3	0.762	1
ADAMTS19	13q-Del	0.763	1
NLGN4X	13q-Del	0.763	1
NLGN4X	Del_12p13.2	0.763	1
PAPPA2	TRERF1	0.763	1
6q-Del	Amp_8p11.21	0.763	1
ABCB1	ARID1A	0.764	1
ACVR1B	FAM65C	0.764	1
ACVR1B	TGFBR3	0.764	1
ACVR1B	WT1	0.764	1
ACVR1B	19q-Del	0.764	1
ACVR1B	21q-Del	0.764	1
ACVR1B	Del_4q22.1	0.764	1
ARID1A	CACNA1F	0.764	1
CACNA1F	Amp_Xq28	0.764	1
EMG1	GNAS	0.764	1
FAM65C	KCNQ5	0.764	1
FAM65C	PAK1	0.764	1
FAM65C	STIM1	0.764	1
FAM65C	Del_12q12	0.764	1
GNAS	Amp_5p15.33	0.764	1
KCNQ5	SRPX	0.764	1
KCNQ5	TGFBR3	0.764	1
KCNQ5	WDR66	0.764	1
KCNQ5	WT1	0.764	1
KCNQ5	19q-Del	0.764	1
LRP1B	1p-Amp	0.764	1
LRP1B	Del_12q24.33	0.764	1
NLRP5	Del_2q22.1	0.764	1
NRAS	Del_19p13.2	0.764	1
PAK1	SRPX	0.764	1
PAK1	TGFBR3	0.764	1
PAK1	WDR66	0.764	1
PAK1	WT1	0.764	1
PAK1	19q-Del	0.764	1
PAK1	21q-Del	0.764	1
SETD2	22q-Del	0.764	1
SIP1	Del_19q13.33	0.764	1
SLAMF9	Del_16q24.3	0.764	1
SRPX	ZNF608	0.764	1
STIM1	WDR66	0.764	1
STIM1	19q-Del	0.764	1
STIM1	Del_4q22.1	0.764	1
TGFBR3	ZNF608	0.764	1
WDR66	ZNF608	0.764	1
WDR66	Del_12q12	0.764	1
WT1	ZNF608	0.764	1
WT1	Del_12q12	0.764	1
ZNF608	19q-Del	0.764	1
ZNF608	21q-Del	0.764	1
ZNF608	Del_4q22.1	0.764	1
Amp_Xq28	Del_10p15.3	0.764	1
Del_2q22.1	Del_15q15.1	0.764	1
Del_2q22.1	Del_16q24.3	0.764	1
ARID2	9p-Del	0.765	1
ARID2	Del_22q13.32	0.765	1
ATM	Amp_12p12.1	0.765	1
GNAS	Amp_12p12.1	0.765	1
RB1	Del_1p36.13	0.765	1
TCEAL5	Amp_11q13.3	0.765	1
TPTE	Del_15q11.2	0.765	1
WT1	7p-Amp	0.765	1
7p-Amp	19q-Del	0.765	1
7p-Amp	21q-Del	0.765	1
15q-Del	Amp_6p21.1	0.765	1
19q-Del	Amp_20q13.33	0.765	1
Amp_11q13.3	Amp_13q33.3	0.765	1
Amp_13q33.3	Del_16q23.1	0.765	1
Amp_20q13.33	Del_4q22.1	0.765	1
APC	EPHA5	0.766	1
BRAF	EPHA3	0.766	1
BRAF	Del_19p13.2	0.766	1
EPHA3	Amp_3q26.2	0.766	1
MAP2	MMP16	0.766	1
MET	20q-Amp	0.766	1
RB1	Amp_14q13.3	0.766	1
20p-Amp	Del_8p23.2	0.766	1
20q-Amp	5q-Del	0.766	1
20q-Amp	Del_9p21.3	0.766	1
Del_2q22.1	Del_8p23.2	0.766	1
ABCB1	ERBB2	0.767	1
ABCB1	U2AF1	0.767	1
APC	Amp_10p15.1	0.767	1
CXCR7	Amp_12q14.1	0.767	1
FTSJD1	TP53	0.767	1
KRAS	Del_12p13.2	0.767	1
NFE2L2	Amp_8q24.21	0.767	1
OR2L13	Amp_17q12	0.767	1
RB1	Del_19q13.33	0.767	1
1p-Amp	Amp_12q14.1	0.767	1
19p-Del	Amp_5p13.1	0.767	1
Amp_7q31.2	Del_11q23.1	0.767	1
Amp_8q24.21	Amp_13q33.3	0.767	1
Amp_10p15.1	Del_3q29	0.767	1
Amp_12q14.1	Del_12q24.33	0.767	1
Amp_18q11.2	Del_19q13.33	0.767	1
Amp_19q12	Del_14q32.33	0.767	1
GAGE2A	NF1	0.768	1
KEAP1	3p-Del	0.768	1
NF1	RPL5	0.768	1
NF1	STRA8	0.768	1
CTNNB1	Del_14q32.33	0.769	1
EPHB1	Del_16q23.1	0.769	1
LRP1B	Amp_8q24.21	0.769	1
NF1	Del_1p13.1	0.769	1
NLGN4X	Del_16q24.3	0.769	1
TCEAL5	Del_13q12.11	0.769	1
Amp_11q13.3	Del_3p21.31	0.769	1
Amp_13q33.3	Del_17p13.3	0.769	1
ABCB1	9p-Del	0.77	1
ACVR1B	PAPPA2	0.77	1
CACNA1F	ROBO2	0.77	1
GNAS	ZEB1	0.77	1
MMP16	Del_22q13.32	0.77	1
NF1	ROBO2	0.77	1
SETD2	TPTE	0.77	1
STK11	Del_15q15.1	0.77	1
Amp_5p15.33	Del_10q26.3	0.77	1
Amp_7p11.2	Del_9q21.11	0.77	1
ADAMTS19	FCRLA	0.771	1
ADAMTS19	3q-Del	0.771	1
ARID1A	SIP1	0.771	1
BRAF	Del_13q12.11	0.771	1
CDKN2A	Del_22q13.32	0.771	1
KEAP1	Amp_17q23.1	0.771	1
LRP1B	Del_3q11.1	0.771	1
MGA	Del_13q12.11	0.771	1
MMP16	Del_3q29	0.771	1
PAPPA2	22q-Del	0.771	1
SETD2	SIP1	0.771	1
SIP1	Del_3p26.2	0.771	1
SIP1	Del_21q11.2	0.771	1
17q-Amp	9p-Del	0.771	1
20p-Amp	Del_22q13.32	0.771	1
19p-Del	Amp_1p34.3	0.771	1
19p-Del	Amp_4q12	0.771	1
19p-Del	Del_3q11.1	0.771	1
Amp_17q23.1	Del_13q12.11	0.771	1
ACVR1B	TTN	0.772	1
ARID2	NUDT11	0.772	1
ARID2	STK19	0.772	1
ATM	DNMT3A	0.772	1
DNMT3A	KEAP1	0.772	1
EMG1	FTSJD1	0.772	1
EMG1	3p-Del	0.772	1
ERBB2	U2AF1	0.772	1
FAM65C	Amp_17q12	0.772	1
FTSJD1	NUDT11	0.772	1
MET	SMARCA4	0.772	1
MET	Del_15q11.2	0.772	1
NUDT11	3p-Del	0.772	1
SMAD4	8p-Del	0.772	1
SRPX	Amp_17q12	0.772	1
STIM1	TTN	0.772	1
TTN	ZNF608	0.772	1
TTN	Amp_1q21.3	0.772	1
WDR66	Amp_17q12	0.772	1
WDR66	Del_19q13.33	0.772	1
WT1	Amp_17q12	0.772	1
WT1	Del_19q13.33	0.772	1
ZEB1	Del_5q31.1	0.772	1
ZEB1	Del_15q15.1	0.772	1
20q-Amp	17p-Del	0.772	1
19q-Del	Amp_17q12	0.772	1
21q-Del	Amp_17q12	0.772	1
Amp_17q12	Del_4q22.1	0.772	1
CACNA1F	CDKN2A	0.773	1
CACNA1F	PRKCG	0.773	1
CACNA1F	Amp_22q11.22	0.773	1
CDKN2A	Del_10p15.3	0.773	1
EPHA3	Del_8p23.2	0.773	1
FCRLA	GAGE2A	0.773	1
FCRLA	RIT1	0.773	1
FCRLA	RPL5	0.773	1
FCRLA	STRA8	0.773	1
FTSJD1	15q-Del	0.773	1
FTSJD1	Del_11p15.5	0.773	1
G3BP1	Amp_1p34.3	0.773	1
G3BP1	Amp_4q12	0.773	1
G3BP1	Del_3q11.1	0.773	1
GAGE2A	3q-Del	0.773	1
GAGE2A	Amp_1p34.3	0.773	1
GAGE2A	Del_3q11.1	0.773	1
GAGE2A	Del_8p23.2	0.773	1
LRP1B	NUDT11	0.773	1
RIT1	3q-Del	0.773	1
RIT1	Amp_1p34.3	0.773	1
RIT1	Amp_4q12	0.773	1
RPL5	3q-Del	0.773	1
RPL5	Amp_1p34.3	0.773	1
RPL5	Amp_4q12	0.773	1
RPL5	Del_3q11.1	0.773	1
RPL5	Del_8p23.2	0.773	1
SLC4A3	3p-Del	0.773	1
SMAD4	3p-Del	0.773	1
STRA8	3q-Del	0.773	1
STRA8	Amp_4q12	0.773	1
STRA8	Del_3q11.1	0.773	1
22q-Del	Amp_22q11.22	0.773	1
BRAF	NRAS	0.774	1
CXCR7	PHKA1	0.774	1
CXCR7	PPP3CA	0.774	1
CXCR7	SLAMF9	0.774	1
KEAP1	Amp_12q14.1	0.774	1
MGA	NRAS	0.774	1
NLRP6	PHKA1	0.774	1
NLRP6	PPP3CA	0.774	1
NLRP6	SLAMF9	0.774	1
NLRP6	Del_2q22.1	0.774	1
NRAS	Amp_17q23.1	0.774	1
NRAS	Del_9q21.11	0.774	1
PAK1	Amp_12p12.1	0.774	1
PHKA1	1p-Amp	0.774	1
PHKA1	Del_12q24.33	0.774	1
PPP3CA	Del_12q24.33	0.774	1
SLAMF9	1p-Amp	0.774	1
SLAMF9	Del_12q24.33	0.774	1
STK19	5p-Amp	0.774	1
TP53	1p-Amp	0.774	1
ZNF608	Amp_12p12.1	0.774	1
1p-Amp	Del_2q22.1	0.774	1
Del_2q22.1	Del_12q24.33	0.774	1
CXCR7	Del_13q34	0.775	1
FTSJD1	RBM10	0.775	1
NLGN4X	NLRP6	0.775	1
ROBO2	Amp_5p13.1	0.775	1
TPTE	Amp_4q12	0.775	1
1p-Amp	Del_13q34	0.775	1
Amp_5p13.1	Amp_12q14.1	0.775	1
Del_12q24.33	Del_13q34	0.775	1
ATM	13q-Del	0.776	1
BRAF	ERBB2	0.776	1
EGFR	Del_5q31.1	0.776	1
ERBB2	MGA	0.776	1
ERBB2	Amp_17q23.1	0.776	1
ERBB2	Del_9q21.11	0.776	1
LRP1B	PIK3CA	0.776	1
NLRP5	Del_18q21.32	0.776	1
RBM10	TCEAL5	0.776	1
ROBO2	15q-Del	0.776	1
SLC4A3	Amp_12q14.1	0.776	1
SMAD4	Amp_12q14.1	0.776	1
TCEAL5	9q-Del	0.776	1
U2AF1	Amp_3q26.2	0.776	1
9p-Del	Amp_12p12.1	0.776	1
Amp_6p21.1	Del_3p21.31	0.776	1
Amp_6p21.1	Del_5q12.1	0.776	1
DNMT3A	Del_17p13.3	0.777	1
EGFR	9p-Del	0.777	1
FAM65C	Amp_5p13.1	0.777	1
NFE2L2	Amp_8p11.21	0.777	1
TCEAL5	Amp_8p11.21	0.777	1
19q-Del	Amp_5p13.1	0.777	1
Amp_8p11.21	Amp_13q33.3	0.777	1
Del_9p21.3	Del_12p13.2	0.777	1
ADAMTS19	SIP1	0.778	1
EPHA5	9q-Del	0.778	1
SIP1	19p-Del	0.778	1
SIP1	Del_1p13.1	0.778	1
ACVR1B	NFE2L2	0.779	1
ACVR1B	TCEAL5	0.779	1
ACVR1B	Amp_13q33.3	0.779	1
ARID1A	Amp_3q26.2	0.779	1
ARID1A	Amp_17q23.1	0.779	1
BRAF	Amp_Xq28	0.779	1
BRAF	Del_3p26.2	0.779	1
GNAS	Del_1p36.13	0.779	1
KCNQ5	NFE2L2	0.779	1
KCNQ5	TCEAL5	0.779	1
KCNQ5	Amp_13q33.3	0.779	1
LRP1B	STK11	0.779	1
NFE2L2	PAK1	0.779	1
NFE2L2	STIM1	0.779	1
NFE2L2	ZNF608	0.779	1
NFE2L2	Del_12q12	0.779	1
PAK1	TCEAL5	0.779	1
PAK1	Amp_13q33.3	0.779	1
ROBO2	Del_6q26	0.779	1
SETD2	Amp_17q23.1	0.779	1
STIM1	TCEAL5	0.779	1
TCEAL5	ZNF608	0.779	1
TCEAL5	Del_12q12	0.779	1
ZNF608	Amp_13q33.3	0.779	1
18p-Del	Amp_12q15	0.779	1
Amp_5p15.33	Del_19p13.3	0.779	1
Amp_13q33.3	Del_12q12	0.779	1
Amp_17q23.1	Del_3p26.2	0.779	1
ATM	18q-Del	0.78	1
ATM	6q-Del	0.78	1
NRAS	SMARCA4	0.78	1
NRAS	17p-Del	0.78	1
Amp_5p15.33	Amp_12p12.1	0.78	1
CACNA1F	7p-Amp	0.781	1
EGFR	15q-Del	0.781	1
EMG1	Del_11q23.1	0.781	1
EMG1	Del_14q32.33	0.781	1
EMG1	Del_Xp22.2	0.781	1
FAM65C	KEAP1	0.781	1
GAGE2A	TPTE	0.781	1
KCNQ5	6q-Del	0.781	1
KEAP1	WT1	0.781	1
KEAP1	21q-Del	0.781	1
NUDT11	Del_11q23.1	0.781	1
RIT1	TPTE	0.781	1
RPL5	TPTE	0.781	1
STIM1	18q-Del	0.781	1
STK11	Del_9p21.3	0.781	1
STK19	Del_11q23.1	0.781	1
STK19	Del_14q32.33	0.781	1
1p-Amp	Del_9p23	0.781	1
18q-Del	Del_12q12	0.781	1
Amp_6p21.1	Del_8p23.2	0.781	1
ABCB1	Amp_17q23.1	0.782	1
ARID1A	RB1	0.782	1
ARID1A	Amp_18q11.2	0.782	1
BRAF	Del_3q29	0.782	1
CDKN2A	Amp_8q24.21	0.782	1
GAGE2A	KRAS	0.782	1
MAP2	Amp_17q23.1	0.782	1
OR2L13	Amp_Xq28	0.782	1
PDGFRA	Amp_1q21.3	0.782	1
RB1	Amp_Xq28	0.782	1
18p-Del	Amp_Xq28	0.782	1
18p-Del	Del_21q11.2	0.782	1
Amp_1q21.3	Del_4q34.3	0.782	1
Amp_14q13.3	Del_21q11.2	0.782	1
Amp_17q23.1	Del_3q29	0.782	1
Amp_20q13.33	Del_8p23.2	0.782	1
APC	5q-Del	0.783	1
ARID1A	SRPX	0.783	1
ARID1A	WT1	0.783	1
ARID1A	19q-Del	0.783	1
ARID1A	Del_4q22.1	0.783	1
DNMT3A	EPHA3	0.783	1
DNMT3A	Del_19p13.2	0.783	1
EPHA5	Del_11q25	0.783	1
EPHB1	PPP3CA	0.783	1
EPHB1	SLAMF9	0.783	1
FAM65C	Del_3p26.2	0.783	1
FAM65C	Del_21q11.2	0.783	1
FCRLA	Del_12p13.2	0.783	1
PIK3CA	Amp_1p34.3	0.783	1
PIK3CA	Amp_4q12	0.783	1
PPP3CA	Amp_7q31.2	0.783	1
PPP3CA	Del_3p21.31	0.783	1
PPP3CA	Del_5q12.1	0.783	1
SETD2	SRPX	0.783	1
SETD2	WDR66	0.783	1
SETD2	21q-Del	0.783	1
SLAMF9	Amp_7q31.2	0.783	1
SLAMF9	Del_3p21.31	0.783	1
SRPX	Amp_Xq28	0.783	1
SRPX	Del_3p26.2	0.783	1
TGFBR3	Amp_Xq28	0.783	1
WDR66	Del_3p26.2	0.783	1
WT1	Del_21q11.2	0.783	1
1q-Amp	Del_17p13.3	0.783	1
20q-Amp	Del_3q29	0.783	1
13q-Del	Amp_1p34.3	0.783	1
13q-Del	Amp_4q12	0.783	1
13q-Del	Del_3q11.1	0.783	1
21q-Del	Amp_Xq28	0.783	1
Amp_1p34.3	Del_12p13.2	0.783	1
Amp_1q21.3	Del_10q26.3	0.783	1
Amp_7q31.2	Del_2q22.1	0.783	1
Del_2q22.1	Del_3p21.31	0.783	1
Del_3q11.1	Del_12p13.2	0.783	1
ATM	NLRP6	0.784	1
ATM	Del_12q24.33	0.784	1
CSMD3	Amp_7p11.2	0.784	1
FTSJD1	8q-Amp	0.784	1
MET	NLRP5	0.784	1
MET	Del_15q15.1	0.784	1
NLRP5	5q-Del	0.784	1
20q-Amp	Del_5q31.1	0.784	1
Amp_14q13.3	Amp_17q23.1	0.784	1
Amp_20q13.33	Del_19p13.2	0.784	1
APC	7p-Amp	0.785	1
APC	Amp_20q13.33	0.785	1
EGFR	SLAMF9	0.785	1
EPHB1	RBM10	0.785	1
ERBB2	SMARCA4	0.785	1
ERBB2	17p-Del	0.785	1
GNAS	Amp_17q12	0.785	1
NLGN4X	8q-Amp	0.785	1
NLRP5	NRAS	0.785	1
NRAS	Del_15q15.1	0.785	1
NRAS	Del_16q24.3	0.785	1
PIK3CA	SIP1	0.785	1
RBM10	Amp_7q31.2	0.785	1
SIP1	Del_12p13.2	0.785	1
SMARCA4	U2AF1	0.785	1
U2AF1	Del_15q11.2	0.785	1
5p-Amp	15q-Del	0.785	1
5p-Amp	18q-Del	0.785	1
5p-Amp	6q-Del	0.785	1
9q-Del	Amp_7q31.2	0.785	1
Amp_11q13.3	Del_16q23.1	0.785	1
ACVR1B	5p-Amp	0.786	1
CDKN2A	OR2L13	0.786	1
CDKN2A	Amp_18q11.2	0.786	1
CDKN2A	Del_11q25	0.786	1
CSMD3	18q-Del	0.786	1
NFE2L2	PDGFRA	0.786	1
NFE2L2	Del_4q34.3	0.786	1
NLGN4X	15q-Del	0.786	1
OR2L13	17q-Amp	0.786	1
OR2L13	20p-Amp	0.786	1
OR2L13	Amp_8q24.21	0.786	1
PRKCG	RB1	0.786	1
PRKCG	Amp_18q11.2	0.786	1
RB1	Amp_8q24.21	0.786	1
RBM10	18q-Del	0.786	1
RBM10	6q-Del	0.786	1
SLC4A3	Del_13q34	0.786	1
STK11	TPTE	0.786	1
TCEAL5	ZEB1	0.786	1
TCEAL5	7q-Amp	0.786	1
TCEAL5	Del_4q34.3	0.786	1
17q-Amp	Amp_18q11.2	0.786	1
17q-Amp	Del_11q25	0.786	1
5p-Amp	Del_12q12	0.786	1
18p-Del	Amp_22q11.22	0.786	1
FAM65C	GAGE2A	0.787	1
FAM65C	RIT1	0.787	1
FAM65C	RPL5	0.787	1
G3BP1	TGFBR3	0.787	1
G3BP1	WT1	0.787	1
G3BP1	21q-Del	0.787	1
G3BP1	Del_4q22.1	0.787	1
GAGE2A	TGFBR3	0.787	1
GAGE2A	WDR66	0.787	1
GAGE2A	19q-Del	0.787	1
GAGE2A	21q-Del	0.787	1
GAGE2A	Del_4q22.1	0.787	1
KEAP1	STK19	0.787	1
NF1	5q-Del	0.787	1
RIT1	TGFBR3	0.787	1
RIT1	WDR66	0.787	1
RIT1	WT1	0.787	1
RIT1	19q-Del	0.787	1
RPL5	SRPX	0.787	1
RPL5	TGFBR3	0.787	1
RPL5	WT1	0.787	1
RPL5	21q-Del	0.787	1
RPL5	Del_4q22.1	0.787	1
SRPX	STRA8	0.787	1
STRA8	19q-Del	0.787	1
TTN	18q-Del	0.787	1
20q-Amp	Amp_5p13.1	0.787	1
Amp_6p21.1	Del_17p13.3	0.787	1
EPHB1	Del_9p21.3	0.788	1
NF1	NLGN4X	0.788	1
NLRP5	Del_18q23	0.788	1
PTPRU	Del_11q23.1	0.788	1
PTPRU	Del_Xp22.2	0.788	1
SLC4A3	Del_11q23.1	0.788	1
SMAD4	Del_14q32.33	0.788	1
TRERF1	Del_14q32.33	0.788	1
3p-Del	Amp_12p12.1	0.788	1
ARID2	PDGFRA	0.789	1
ARID2	ZEB1	0.789	1
EMG1	Amp_10p15.1	0.789	1
EMG1	Del_10q26.3	0.789	1
NF1	SRPX	0.789	1
NF1	WT1	0.789	1
NF1	Del_4q22.1	0.789	1
NLRP5	Amp_17q12	0.789	1
NUDT11	Amp_10p15.1	0.789	1
NUDT11	Del_10q26.3	0.789	1
SLC4A3	Del_6q26	0.789	1
SMAD4	Del_6q26	0.789	1
STK19	Del_10q26.3	0.789	1
TRERF1	Del_6q26	0.789	1
TTN	Amp_12q15	0.789	1
20p-Amp	Amp_5p15.33	0.789	1
Amp_17q12	Del_16q24.3	0.789	1
Amp_Xq28	Del_9p23	0.789	1
RBM10	1q-Amp	0.79	1
ROBO2	Del_5q12.1	0.79	1
STK11	Amp_1p34.3	0.79	1
1p-Amp	Del_9p21.3	0.79	1
CXCR7	ERBB2	0.791	1
CXCR7	U2AF1	0.791	1
EPHA3	Del_12q24.33	0.791	1
ERBB2	NLRP6	0.791	1
ERBB2	1p-Amp	0.791	1
ERBB2	Del_12q24.33	0.791	1
NF1	PIK3CA	0.791	1
NLRP6	U2AF1	0.791	1
PAPPA2	Del_22q13.32	0.791	1
RB1	ROBO2	0.791	1
ROBO2	18p-Del	0.791	1
U2AF1	Del_12q24.33	0.791	1
8p-Del	Amp_1q21.3	0.791	1
Amp_6p21.1	Del_1p36.13	0.791	1
Amp_12q14.1	Del_11q25	0.791	1
ARID1A	SMARCA4	0.792	1
ARID2	Del_1p36.13	0.792	1
CACNA1F	SIP1	0.792	1
PHKA1	Del_6q26	0.792	1
PPP3CA	Del_6q26	0.792	1
PPP3CA	Del_18q23	0.792	1
SETD2	SMARCA4	0.792	1
SIP1	22q-Del	0.792	1
SIP1	Del_10p15.3	0.792	1
SMARCA4	Amp_Xq28	0.792	1
TCEAL5	1q-Amp	0.792	1
1q-Amp	18q-Del	0.792	1
17p-Del	Amp_Xq28	0.792	1
Amp_4q12	Del_19p13.3	0.792	1
Amp_5p15.33	Del_9p21.3	0.792	1
Del_2q22.1	Del_18q23	0.792	1
APC	SMARCA4	0.793	1
PHKA1	Amp_11q13.3	0.793	1
PPP3CA	Amp_11q13.3	0.793	1
SLAMF9	Amp_11q13.3	0.793	1
SLAMF9	Del_16q23.1	0.793	1
Amp_11q13.3	Del_2q22.1	0.793	1
ABCB1	DNMT3A	0.794	1
ACVR1B	PHKA1	0.794	1
ACVR1B	SLAMF9	0.794	1
ACVR1B	Del_2q22.1	0.794	1
ADAMTS19	FAM65C	0.794	1
ADAMTS19	SRPX	0.794	1
ADAMTS19	TGFBR3	0.794	1
ADAMTS19	WT1	0.794	1
ADAMTS19	21q-Del	0.794	1
ARID2	Del_6q26	0.794	1
CTNNB1	EPHA5	0.794	1
CTNNB1	MMP16	0.794	1
ERBB2	NLRP5	0.794	1
ERBB2	Del_5q31.1	0.794	1
ERBB2	Del_16q24.3	0.794	1
FAM65C	19p-Del	0.794	1
FAM65C	Del_1p13.1	0.794	1
GAGE2A	Del_19p13.3	0.794	1
KCNQ5	PHKA1	0.794	1
KCNQ5	PPP3CA	0.794	1
KCNQ5	Del_2q22.1	0.794	1
NLGN4X	Amp_12q15	0.794	1
OR2L13	1q-Amp	0.794	1
PAK1	PHKA1	0.794	1
PAK1	PPP3CA	0.794	1
PAK1	SLAMF9	0.794	1
PHKA1	STIM1	0.794	1
PHKA1	ZNF608	0.794	1
PHKA1	Del_12q12	0.794	1
PPP3CA	STIM1	0.794	1
PPP3CA	ZNF608	0.794	1
PPP3CA	Del_12q12	0.794	1
RBM10	Del_14q32.33	0.794	1
SLAMF9	STIM1	0.794	1
SLAMF9	ZNF608	0.794	1
SLAMF9	Del_12q12	0.794	1
SRPX	19p-Del	0.794	1
SRPX	Del_1p13.1	0.794	1
STIM1	Del_2q22.1	0.794	1
STRA8	Del_19p13.3	0.794	1
TGFBR3	Del_1p13.1	0.794	1
U2AF1	Del_16q24.3	0.794	1
WDR66	19p-Del	0.794	1
WDR66	Del_1p13.1	0.794	1
WT1	19p-Del	0.794	1
1q-Amp	18p-Del	0.794	1
Amp_1q21.3	Amp_19q12	0.794	1
Amp_6p21.1	Del_13q34	0.794	1
Del_2q22.1	Del_12q12	0.794	1
ATM	22q-Del	0.795	1
CACNA1F	FCRLA	0.795	1
CACNA1F	PIK3CA	0.795	1
CACNA1F	3q-Del	0.795	1
CACNA1F	Amp_4q12	0.795	1
FCRLA	Del_10p15.3	0.795	1
GNAS	Amp_1q21.3	0.795	1
PIK3CA	22q-Del	0.795	1
Amp_11q13.3	Del_6q14.3	0.795	1
ACVR1B	Amp_12q15	0.796	1
ADAMTS19	Del_11q25	0.796	1
EPHB1	NRAS	0.796	1
EPHB1	Del_9p23	0.796	1
KCNQ5	Amp_12q15	0.796	1
KEAP1	Del_12p13.2	0.796	1
NRAS	Amp_7q31.2	0.796	1
NRAS	Del_3p21.31	0.796	1
OR2L13	19p-Del	0.796	1
TCEAL5	Amp_17q12	0.796	1
ZNF608	Amp_12q15	0.796	1
Amp_12q15	Del_12q12	0.796	1
Amp_13q33.3	Del_19q13.33	0.796	1
ACVR1B	Amp_1q21.3	0.797	1
ADAMTS19	BRAF	0.797	1
ADAMTS19	Amp_3q26.2	0.797	1
ADAMTS19	Del_9q21.11	0.797	1
BRAF	TTN	0.797	1
BRAF	Del_1p13.1	0.797	1
BRAF	Del_9q21.11	0.797	1
KCNQ5	Amp_1q21.3	0.797	1
STIM1	Amp_1q21.3	0.797	1
19p-Del	Amp_3q26.2	0.797	1
EMG1	MET	0.798	1
EMG1	20q-Amp	0.798	1
EMG1	5q-Del	0.798	1
MAP2	SMARCA4	0.798	1
MAP2	Del_15q11.2	0.798	1
MET	STK19	0.798	1
NLGN4X	Amp_14q13.3	0.798	1
NUDT11	20q-Amp	0.798	1
NUDT11	5q-Del	0.798	1
STK19	20q-Amp	0.798	1
1q-Amp	Amp_8p11.21	0.798	1
8q-Amp	Del_13q12.11	0.798	1
18q-Del	Amp_5p13.1	0.798	1
6q-Del	Amp_5p13.1	0.798	1
ABCB1	1p-Amp	0.799	1
APC	Del_3q29	0.799	1
CDKN2A	GNAS	0.799	1
CTNNB1	20q-Amp	0.799	1
CTNNB1	5q-Del	0.799	1
DNMT3A	MET	0.799	1
DNMT3A	20q-Amp	0.799	1
DNMT3A	5q-Del	0.799	1
EPHA3	Del_16q24.3	0.799	1
GNAS	17q-Amp	0.799	1
GNAS	Del_21q11.2	0.799	1
KEAP1	Amp_12p12.1	0.799	1
KEAP1	Del_Xp22.2	0.799	1
MAP2	1p-Amp	0.799	1
MMP16	NLRP6	0.799	1
MMP16	1p-Amp	0.799	1
MMP16	Del_12q24.33	0.799	1
OR2L13	SIP1	0.799	1
RB1	SIP1	0.799	1
SIP1	18p-Del	0.799	1
TCEAL5	Amp_20q13.33	0.799	1
17q-Amp	18q-Del	0.799	1
18q-Del	Amp_22q11.22	0.799	1
6q-Del	Amp_22q11.22	0.799	1
Amp_7p11.2	Del_4q34.3	0.799	1
Amp_17q12	Del_17p13.3	0.799	1
EPHA5	Del_4q34.3	0.8	1
FCRLA	Del_22q13.32	0.8	1
G3BP1	9p-Del	0.8	1
RIT1	9p-Del	0.8	1
RIT1	Del_22q13.32	0.8	1
SETD2	Del_6q26	0.8	1
9p-Del	Del_3q11.1	0.8	1
Amp_Xq28	Del_6q26	0.8	1
CACNA1F	Amp_5p15.33	0.801	1
G3BP1	NFE2L2	0.801	1
GAGE2A	NFE2L2	0.801	1
GAGE2A	TCEAL5	0.801	1
GAGE2A	Amp_13q33.3	0.801	1
NFE2L2	RIT1	0.801	1
NFE2L2	STRA8	0.801	1
NRAS	Del_16q23.1	0.801	1
PDGFRA	Amp_19q12	0.801	1
RIT1	TCEAL5	0.801	1
RIT1	Amp_13q33.3	0.801	1
ROBO2	Del_1p36.13	0.801	1
RPL5	TCEAL5	0.801	1
RPL5	Amp_13q33.3	0.801	1
13q-Del	Amp_5p13.1	0.801	1
Amp_19q12	Del_4q34.3	0.801	1
ABCB1	PIK3CA	0.802	1
ABCB1	Del_12p13.2	0.802	1
ARID2	Amp_17q12	0.802	1
ARID2	Del_19q13.33	0.802	1
KEAP1	PAK1	0.802	1
KEAP1	STIM1	0.802	1
KEAP1	Del_12q12	0.802	1
TP53	Amp_8q24.21	0.802	1
TRERF1	Del_10q26.3	0.802	1
7p-Amp	9q-Del	0.802	1
15q-Del	Amp_10p15.1	0.802	1
3p-Del	Amp_17q12	0.802	1
9q-Del	Del_2q22.1	0.802	1
Amp_5p13.1	Del_13q34	0.802	1
Amp_10p15.1	Del_19p13.3	0.802	1
ACVR1B	ROBO2	0.803	1
ARID1A	KRAS	0.803	1
CTNNB1	1q-Amp	0.803	1
DNMT3A	1q-Amp	0.803	1
KCNQ5	Amp_12q14.1	0.803	1
KRAS	Del_21q11.2	0.803	1
MMP16	7p-Amp	0.803	1
NFE2L2	Amp_5p15.33	0.803	1
PAK1	ROBO2	0.803	1
ROBO2	STIM1	0.803	1
ROBO2	ZNF608	0.803	1
SMARCA4	Amp_8p11.21	0.803	1
Amp_5p15.33	Amp_13q33.3	0.803	1
Amp_12q14.1	Del_12q12	0.803	1
CTNNB1	Amp_3q26.2	0.804	1
CTNNB1	Del_9q21.11	0.804	1
DNMT3A	MGA	0.804	1
NLRP6	Amp_5p13.1	0.804	1
TTN	Amp_7q31.2	0.804	1
TTN	Del_3p21.31	0.804	1
7q-Amp	6q-Del	0.804	1
6q-Del	Del_4q34.3	0.804	1
Amp_18q11.2	Amp_20q13.33	0.804	1
Amp_19q12	Del_13q34	0.804	1
APC	Del_5q31.1	0.805	1
FAM65C	TPTE	0.805	1
PIK3CA	SRPX	0.805	1
PIK3CA	21q-Del	0.805	1
PIK3CA	Del_4q22.1	0.805	1
SLAMF9	Del_13q12.11	0.805	1
SRPX	13q-Del	0.805	1
SRPX	Del_12p13.2	0.805	1
TGFBR3	13q-Del	0.805	1
TPTE	WT1	0.805	1
TPTE	Del_4q22.1	0.805	1
WDR66	13q-Del	0.805	1
5p-Amp	Amp_8p11.21	0.805	1
13q-Del	Amp_1q21.3	0.805	1
Del_2q22.1	Del_13q12.11	0.805	1
ARID1A	NLRP5	0.806	1
ARID1A	Del_5q31.1	0.806	1
EPHA3	Del_11p15.5	0.806	1
KEAP1	PTPRU	0.806	1
KEAP1	SLC4A3	0.806	1
LRP1B	Del_18q21.32	0.806	1
MET	TPTE	0.806	1
NLRP5	Amp_Xq28	0.806	1
NLRP5	Del_21q11.2	0.806	1
NRAS	RBM10	0.806	1
NRAS	9q-Del	0.806	1
PPP3CA	Amp_14q13.3	0.806	1
PTPRU	Del_17p13.3	0.806	1
PTPRU	Del_19p13.2	0.806	1
SETD2	Del_22q13.32	0.806	1
SLAMF9	Amp_14q13.3	0.806	1
SLC4A3	Del_13q12.11	0.806	1
SMAD4	Del_17p13.3	0.806	1
SMARCA4	9p-Del	0.806	1
Amp_12q14.1	Del_8p23.2	0.806	1
Amp_Xq28	Del_16q24.3	0.806	1
Del_1p36.13	Del_Xp22.2	0.806	1
APC	EMG1	0.807	1
APC	NUDT11	0.807	1
APC	STK19	0.807	1
BRAF	1p-Amp	0.807	1
CXCR7	MGA	0.807	1
CXCR7	Del_9q21.11	0.807	1
EMG1	Del_3q29	0.807	1
EPHA3	Del_10p15.3	0.807	1
FCRLA	OR2L13	0.807	1
FCRLA	Amp_18q11.2	0.807	1
FCRLA	Del_11q25	0.807	1
MET	Amp_19q12	0.807	1
MGA	NLRP6	0.807	1
MGA	1p-Amp	0.807	1
NFE2L2	Del_21q11.2	0.807	1
NLRP6	Amp_3q26.2	0.807	1
NLRP6	Del_9q21.11	0.807	1
NUDT11	Del_3q29	0.807	1
OR2L13	Amp_1p34.3	0.807	1
OR2L13	Del_3q11.1	0.807	1
PDGFRA	Del_11q23.1	0.807	1
PDGFRA	Del_14q32.33	0.807	1
RB1	3q-Del	0.807	1
SETD2	TCEAL5	0.807	1
SETD2	Amp_13q33.3	0.807	1
STK19	Del_3q29	0.807	1
TCEAL5	Amp_Xq28	0.807	1
TCEAL5	Del_3p26.2	0.807	1
TCEAL5	Del_21q11.2	0.807	1
ZEB1	Del_11q23.1	0.807	1
ZEB1	Del_Xp22.2	0.807	1
1p-Amp	Amp_3q26.2	0.807	1
1p-Amp	Del_9q21.11	0.807	1
20q-Amp	Del_5q12.1	0.807	1
7q-Amp	Del_14q32.33	0.807	1
18p-Del	Del_3q11.1	0.807	1
Amp_1p34.3	Amp_18q11.2	0.807	1
Amp_11q13.3	Amp_12q14.1	0.807	1
Amp_13q33.3	Amp_Xq28	0.807	1
Amp_18q11.2	Del_3q11.1	0.807	1
Del_3q11.1	Del_11q25	0.807	1
CXCR7	NLRP6	0.808	1
CXCR7	1p-Amp	0.808	1
CXCR7	Del_12q24.33	0.808	1
KRAS	Del_10p15.3	0.808	1
NLRP6	1p-Amp	0.808	1
NLRP6	Del_12q24.33	0.808	1
PAPPA2	Amp_7q31.2	0.808	1
3p-Del	Amp_5p15.33	0.808	1
Del_9p21.3	Del_15q11.2	0.808	1
ATM	Amp_12q15	0.809	1
CSMD3	CTNNB1	0.809	1
MGA	1q-Amp	0.809	1
Amp_1p34.3	Del_8p23.2	0.809	1
Amp_12p12.1	Del_Xp22.2	0.809	1
ACVR1B	ERBB2	0.81	1
ACVR1B	NLGN4X	0.81	1
ACVR1B	U2AF1	0.81	1
ADAMTS19	Del_15q11.2	0.81	1
ERBB2	KCNQ5	0.81	1
ERBB2	PAK1	0.81	1
ERBB2	ZNF608	0.81	1
ERBB2	Del_12q12	0.81	1
KCNQ5	NLGN4X	0.81	1
KCNQ5	U2AF1	0.81	1
KCNQ5	Del_13q34	0.81	1
NLGN4X	STIM1	0.81	1
NLGN4X	Del_12q12	0.81	1
SMARCA4	19p-Del	0.81	1
STIM1	U2AF1	0.81	1
STIM1	Del_13q34	0.81	1
TCEAL5	Del_9p21.3	0.81	1
U2AF1	ZNF608	0.81	1
U2AF1	Del_12q12	0.81	1
8q-Amp	Del_11q23.1	0.81	1
Amp_8q24.21	Del_10q26.3	0.81	1
Amp_12q15	Del_19p13.3	0.81	1
Amp_13q33.3	Del_9p21.3	0.81	1
ARID2	Amp_5p13.1	0.811	1
ARID2	Amp_22q11.22	0.811	1
CSMD3	7p-Amp	0.811	1
ERBB2	Del_3p21.31	0.811	1
FTSJD1	17q-Amp	0.811	1
FTSJD1	20p-Amp	0.811	1
GNAS	Amp_12q14.1	0.811	1
LRP1B	Amp_10p15.1	0.811	1
LRP1B	Del_10q26.3	0.811	1
OR2L13	Del_12p13.2	0.811	1
U2AF1	Amp_19q12	0.811	1
17q-Amp	3p-Del	0.811	1
17q-Amp	Amp_14q13.3	0.811	1
13q-Del	Amp_18q11.2	0.811	1
3p-Del	Amp_5p13.1	0.811	1
3p-Del	Amp_22q11.22	0.811	1
9p-Del	Amp_10p15.1	0.811	1
Amp_3q26.2	Amp_8q24.21	0.811	1
Amp_18q11.2	Del_12p13.2	0.811	1
ADAMTS19	GNAS	0.812	1
APC	NF1	0.812	1
CACNA1F	NF1	0.812	1
CSMD3	Del_18q21.32	0.812	1
EPHA5	Amp_8q24.21	0.812	1
GNAS	19p-Del	0.812	1
GNAS	Del_1p13.1	0.812	1
MGA	Del_15q11.2	0.812	1
NRAS	Del_4q34.3	0.812	1
PHKA1	7q-Amp	0.812	1
PHKA1	Amp_8p11.21	0.812	1
PPP3CA	ZEB1	0.812	1
SLAMF9	ZEB1	0.812	1
SLAMF9	Amp_8p11.21	0.812	1
SMARCA4	Amp_17q23.1	0.812	1
ZEB1	Del_2q22.1	0.812	1
Amp_17q23.1	Del_15q11.2	0.812	1
Amp_22q11.22	Del_6q14.3	0.812	1
ABCB1	NLRP5	0.813	1
ABCB1	Del_15q15.1	0.813	1
ADAMTS19	8q-Amp	0.813	1
ARID2	SIP1	0.813	1
FTSJD1	SIP1	0.813	1
MAP2	Del_15q15.1	0.813	1
MMP16	NLRP5	0.813	1
RIT1	Amp_12p12.1	0.813	1
SIP1	3p-Del	0.813	1
SRPX	Del_9p23	0.813	1
TPTE	13q-Del	0.813	1
8q-Amp	Del_1p13.1	0.813	1
Amp_5p15.33	Amp_12q14.1	0.813	1
ADAMTS19	Del_9p23	0.814	1
APC	CTNNB1	0.814	1
ATM	OR2L13	0.814	1
ATM	Amp_18q11.2	0.814	1
CTNNB1	Del_3q29	0.814	1
DNMT3A	Del_3q29	0.814	1
MGA	PIK3CA	0.814	1
MGA	Del_12p13.2	0.814	1
STIM1	Amp_8q24.21	0.814	1
13q-Del	Amp_17q23.1	0.814	1
Amp_3q26.2	Del_12p13.2	0.814	1
Amp_5p13.1	Amp_7q31.2	0.814	1
Amp_8q24.21	Del_12q12	0.814	1
ARID1A	FTSJD1	0.815	1
ARID2	Del_3p26.2	0.815	1
CTNNB1	SMARCA4	0.815	1
FTSJD1	Del_21q11.2	0.815	1
G3BP1	PPP3CA	0.815	1
G3BP1	SLAMF9	0.815	1
G3BP1	Del_2q22.1	0.815	1
GAGE2A	PHKA1	0.815	1
GAGE2A	PPP3CA	0.815	1
LRP1B	Del_5q12.1	0.815	1
NLGN4X	TPTE	0.815	1
NLRP6	17p-Del	0.815	1
NLRP6	Amp_7p11.2	0.815	1
PHKA1	RIT1	0.815	1
PHKA1	RPL5	0.815	1
PHKA1	STRA8	0.815	1
PPP3CA	RIT1	0.815	1
PTPRU	Amp_1q21.3	0.815	1
RIT1	SLAMF9	0.815	1
RPL5	SLAMF9	0.815	1
RPL5	Del_2q22.1	0.815	1
SLAMF9	STRA8	0.815	1
SLC4A3	Amp_1q21.3	0.815	1
STK11	STK19	0.815	1
17p-Del	Del_12q24.33	0.815	1
3p-Del	Amp_Xq28	0.815	1
Amp_1q21.3	Del_11p15.5	0.815	1
Amp_7p11.2	Del_12q24.33	0.815	1
CACNA1F	SRPX	0.816	1
CACNA1F	WDR66	0.816	1
CACNA1F	Del_4q22.1	0.816	1
CTNNB1	EMG1	0.816	1
DNMT3A	EMG1	0.816	1
DNMT3A	NUDT11	0.816	1
DNMT3A	STK19	0.816	1
EMG1	Amp_5p15.33	0.816	1
EPHA3	Amp_5p15.33	0.816	1
FAM65C	22q-Del	0.816	1
FAM65C	Del_10p15.3	0.816	1
MAP2	PTPRU	0.816	1
MAP2	SLC4A3	0.816	1
MAP2	TRERF1	0.816	1
MET	PTPRU	0.816	1
MET	SLC4A3	0.816	1
MET	SMAD4	0.816	1
MET	TRERF1	0.816	1
MET	15q-Del	0.816	1
MGA	Del_6q14.3	0.816	1
MMP16	SLC4A3	0.816	1
MMP16	SMAD4	0.816	1
MMP16	15q-Del	0.816	1
PAPPA2	Amp_7p11.2	0.816	1
PRKCG	Amp_6p21.1	0.816	1
SMAD4	20q-Amp	0.816	1
SMAD4	5q-Del	0.816	1
SRPX	22q-Del	0.816	1
TGFBR3	22q-Del	0.816	1
TGFBR3	Del_10p15.3	0.816	1
WT1	Del_10p15.3	0.816	1
20q-Amp	Amp_5p15.33	0.816	1
5q-Del	Del_11p15.5	0.816	1
ACVR1B	ATM	0.817	1
ATM	KCNQ5	0.817	1
ATM	PAK1	0.817	1
ATM	STIM1	0.817	1
ATM	ZNF608	0.817	1
EGFR	Amp_19q12	0.817	1
EPHB1	Amp_17q12	0.817	1
EPHB1	Del_18q21.32	0.817	1
FCRLA	Amp_7p11.2	0.817	1
GNAS	1q-Amp	0.817	1
KRAS	TPTE	0.817	1
NFE2L2	19p-Del	0.817	1
NFE2L2	Del_1p13.1	0.817	1
NRAS	Amp_17q12	0.817	1
NRAS	Del_19q13.33	0.817	1
TCEAL5	Del_1p13.1	0.817	1
Amp_17q12	Del_3p21.31	0.817	1
ATM	KEAP1	0.818	1
EPHA5	SLAMF9	0.818	1
FCRLA	GNAS	0.818	1
GNAS	Amp_4q12	0.818	1
KEAP1	Del_5q31.1	0.818	1
KRAS	Del_22q13.32	0.818	1
NF1	Del_18q23	0.818	1
TTN	WDR66	0.818	1
EMG1	KRAS	0.819	1
ERBB2	Amp_11q13.3	0.819	1
ERBB2	Del_16q23.1	0.819	1
G3BP1	18q-Del	0.819	1
G3BP1	6q-Del	0.819	1
KEAP1	6q-Del	0.819	1
LRP1B	22q-Del	0.819	1
MAP2	Del_10p15.3	0.819	1
MMP16	22q-Del	0.819	1
RIT1	18q-Del	0.819	1
RIT1	6q-Del	0.819	1
RPL5	6q-Del	0.819	1
STRA8	18q-Del	0.819	1
U2AF1	Amp_11q13.3	0.819	1
5q-Del	Amp_11q13.3	0.819	1
Amp_10p15.1	Del_1p36.13	0.819	1
Amp_11q13.3	Del_9p23	0.819	1
Amp_14q13.3	Del_3q29	0.819	1
Amp_17q12	Del_11q23.1	0.819	1
Amp_17q12	Del_Xp22.2	0.819	1
Del_14q32.33	Del_18q23	0.819	1
EPHA5	Amp_17q12	0.82	1
KRAS	18q-Del	0.82	1
NF1	NFE2L2	0.82	1
NF1	Amp_13q33.3	0.82	1
NLGN4X	Amp_11q13.3	0.82	1
SLAMF9	Amp_8q24.21	0.82	1
WDR66	Del_19p13.3	0.82	1
7p-Amp	Amp_3q26.2	0.82	1
3p-Del	Amp_6p21.1	0.82	1
6q-Del	Del_Xp22.2	0.82	1
Amp_8q24.21	Del_2q22.1	0.82	1
Amp_17q23.1	Amp_20q13.33	0.82	1
FTSJD1	Amp_8p11.21	0.821	1
KEAP1	Amp_13q33.3	0.821	1
NRAS	Amp_1q21.3	0.821	1
TPTE	Amp_19q12	0.821	1
3p-Del	Amp_8p11.21	0.821	1
Amp_20q13.33	Del_4q34.3	0.821	1
ADAMTS19	Del_15q15.1	0.822	1
CACNA1F	KEAP1	0.822	1
CSMD3	G3BP1	0.822	1
CSMD3	GAGE2A	0.822	1
CSMD3	RIT1	0.822	1
CSMD3	RPL5	0.822	1
EPHA3	NF1	0.822	1
EPHA5	Del_11p15.5	0.822	1
ERBB2	8q-Amp	0.822	1
ERBB2	Del_18q21.32	0.822	1
GNAS	NLGN4X	0.822	1
KEAP1	Del_10p15.3	0.822	1
19p-Del	Del_18q23	0.822	1
6q-Del	Amp_12p12.1	0.822	1
Amp_8p11.21	Del_16q24.3	0.822	1
Amp_14q13.3	Del_9p23	0.822	1
Del_1p13.1	Del_16q24.3	0.822	1
ARID1A	NRAS	0.823	1
CDKN2A	Del_11q23.1	0.823	1
CDKN2A	Del_Xp22.2	0.823	1
CXCR7	NLRP5	0.823	1
CXCR7	Del_5q31.1	0.823	1
CXCR7	Del_16q24.3	0.823	1
EPHA3	8q-Amp	0.823	1
NLRP5	Del_12q24.33	0.823	1
NLRP5	Del_22q13.32	0.823	1
NRAS	SETD2	0.823	1
NRAS	Del_21q11.2	0.823	1
PRKCG	Del_14q32.33	0.823	1
17q-Amp	Del_11q23.1	0.823	1
17q-Amp	Del_14q32.33	0.823	1
17q-Amp	Del_Xp22.2	0.823	1
1p-Amp	Amp_5p15.33	0.823	1
1p-Amp	Del_16q24.3	0.823	1
Amp_5p15.33	Del_3p21.31	0.823	1
Del_12q24.33	Del_16q24.3	0.823	1
EPHA3	PAK1	0.824	1
KCNQ5	Del_19p13.2	0.824	1
MGA	TP53	0.824	1
MGA	Del_8p23.2	0.824	1
MMP16	STK11	0.824	1
PAPPA2	RIT1	0.824	1
PAPPA2	RPL5	0.824	1
PDGFRA	Amp_10p15.1	0.824	1
PDGFRA	Del_10q26.3	0.824	1
RBM10	ROBO2	0.824	1
RBM10	Amp_12q14.1	0.824	1
ROBO2	9q-Del	0.824	1
SMAD4	TP53	0.824	1
STIM1	Del_19p13.2	0.824	1
TP53	15q-Del	0.824	1
TPTE	8p-Del	0.824	1
9p-Del	Amp_6p21.1	0.824	1
Amp_3q26.2	Del_8p23.2	0.824	1
Del_4q34.3	Del_10q26.3	0.824	1
ACVR1B	NLRP6	0.825	1
ACVR1B	1p-Amp	0.825	1
ACVR1B	Del_12q24.33	0.825	1
APC	Amp_7p11.2	0.825	1
CTNNB1	Del_5q31.1	0.825	1
CTNNB1	Del_16q24.3	0.825	1
CXCR7	PAK1	0.825	1
CXCR7	STIM1	0.825	1
CXCR7	Del_12q12	0.825	1
DNMT3A	NLRP5	0.825	1
EMG1	PTPRU	0.825	1
EMG1	SMAD4	0.825	1
EMG1	TRERF1	0.825	1
EMG1	15q-Del	0.825	1
EMG1	Del_11p15.5	0.825	1
FCRLA	18q-Del	0.825	1
KCNQ5	NLRP6	0.825	1
KCNQ5	1p-Amp	0.825	1
KCNQ5	Del_12q24.33	0.825	1
NFE2L2	Amp_5p13.1	0.825	1
NLRP6	PAK1	0.825	1
NLRP6	STIM1	0.825	1
NLRP6	ZNF608	0.825	1
NLRP6	Del_12q12	0.825	1
NUDT11	PTPRU	0.825	1
NUDT11	SLC4A3	0.825	1
NUDT11	SMAD4	0.825	1
NUDT11	TRERF1	0.825	1
NUDT11	15q-Del	0.825	1
NUDT11	Del_11p15.5	0.825	1
PAK1	Del_12q24.33	0.825	1
PPP3CA	1q-Amp	0.825	1
RB1	5p-Amp	0.825	1
SIP1	Amp_14q13.3	0.825	1
SLC4A3	STK19	0.825	1
SMAD4	STK19	0.825	1
STIM1	1p-Amp	0.825	1
STIM1	Del_12q24.33	0.825	1
STK11	Del_9p23	0.825	1
STK19	TRERF1	0.825	1
STK19	15q-Del	0.825	1
STK19	Del_11p15.5	0.825	1
ZNF608	Del_12q24.33	0.825	1
1p-Amp	Del_12q12	0.825	1
1q-Amp	Amp_12q15	0.825	1
5p-Amp	Del_11q25	0.825	1
22q-Del	Amp_18q11.2	0.825	1
6q-Del	Amp_4q12	0.825	1
6q-Del	Del_3q11.1	0.825	1
Amp_5p13.1	Amp_13q33.3	0.825	1
Amp_5p13.1	Del_3q29	0.825	1
Amp_18q11.2	Del_10p15.3	0.825	1
Del_9p21.3	Del_14q32.33	0.825	1
Del_9p21.3	Del_Xp22.2	0.825	1
APC	EPHB1	0.826	1
BRAF	PTPRU	0.826	1
BRAF	SLC4A3	0.826	1
BRAF	SMAD4	0.826	1
BRAF	TRERF1	0.826	1
CSMD3	MGA	0.826	1
GNAS	PIK3CA	0.826	1
GNAS	13q-Del	0.826	1
GNAS	Del_12p13.2	0.826	1
MGA	SMAD4	0.826	1
PIK3CA	17p-Del	0.826	1
PTPRU	Amp_17q23.1	0.826	1
SLC4A3	Del_9q21.11	0.826	1
SMARCA4	Del_12p13.2	0.826	1
STK11	19q-Del	0.826	1
TRERF1	Del_9q21.11	0.826	1
15q-Del	Amp_17q23.1	0.826	1
18p-Del	Del_19p13.2	0.826	1
Amp_3q26.2	Del_11p15.5	0.826	1
Del_3q29	Del_5q12.1	0.826	1
EGFR	Amp_5p13.1	0.827	1
FAM65C	18p-Del	0.827	1
KCNQ5	Del_9p23	0.827	1
KRAS	NLRP6	0.827	1
KRAS	17p-Del	0.827	1
KRAS	Del_12q24.33	0.827	1
MGA	NLRP5	0.827	1
NFE2L2	13q-Del	0.827	1
NLRP5	Amp_3q26.2	0.827	1
NLRP5	Amp_17q23.1	0.827	1
NLRP5	Del_9q21.11	0.827	1
OR2L13	WDR66	0.827	1
OR2L13	WT1	0.827	1
OR2L13	19q-Del	0.827	1
PAPPA2	SLAMF9	0.827	1
RB1	TGFBR3	0.827	1
RB1	21q-Del	0.827	1
SMAD4	Amp_5p15.33	0.827	1
SRPX	Amp_18q11.2	0.827	1
TRERF1	Amp_5p15.33	0.827	1
WDR66	Amp_18q11.2	0.827	1
WDR66	Del_11q25	0.827	1
WT1	Amp_18q11.2	0.827	1
ZEB1	Amp_5p15.33	0.827	1
1q-Amp	Del_15q11.2	0.827	1
18p-Del	Del_4q22.1	0.827	1
19q-Del	Amp_18q11.2	0.827	1
19q-Del	Del_11q25	0.827	1
21q-Del	Amp_18q11.2	0.827	1
8p-Del	Amp_11q13.3	0.827	1
Amp_13q33.3	Del_12p13.2	0.827	1
Amp_17q23.1	Del_16q24.3	0.827	1
ADAMTS19	NRAS	0.828	1
BRAF	18q-Del	0.828	1
EPHA5	7p-Amp	0.828	1
EPHA5	Amp_20q13.33	0.828	1
EPHB1	Del_18q23	0.828	1
ERBB2	9q-Del	0.828	1
ERBB2	Del_18q23	0.828	1
MGA	18q-Del	0.828	1
NRAS	19p-Del	0.828	1
NRAS	Del_1p13.1	0.828	1
PDGFRA	Amp_6p21.1	0.828	1
RBM10	U2AF1	0.828	1
SIP1	Amp_10p15.1	0.828	1
SIP1	Del_10q26.3	0.828	1
WDR66	9p-Del	0.828	1
Amp_7q31.2	Del_18q23	0.828	1
ERBB2	G3BP1	0.829	1
ERBB2	RPL5	0.829	1
ERBB2	STRA8	0.829	1
FCRLA	Amp_8q24.21	0.829	1
G3BP1	U2AF1	0.829	1
GAGE2A	U2AF1	0.829	1
NUDT11	TTN	0.829	1
RBM10	7q-Amp	0.829	1
RIT1	U2AF1	0.829	1
RPL5	U2AF1	0.829	1
STRA8	U2AF1	0.829	1
TRERF1	1q-Amp	0.829	1
1q-Amp	Del_11p15.5	0.829	1
7q-Amp	9q-Del	0.829	1
8q-Amp	18q-Del	0.829	1
ABCB1	5p-Amp	0.83	1
ARID2	3q-Del	0.83	1
ARID2	Amp_4q12	0.83	1
CSMD3	NLRP6	0.83	1
EPHA3	Amp_19q12	0.83	1
EPHA5	3p-Del	0.83	1
FAM65C	LRP1B	0.83	1
FCRLA	FTSJD1	0.83	1
FTSJD1	3q-Del	0.83	1
FTSJD1	Amp_4q12	0.83	1
LRP1B	19q-Del	0.83	1
PPP3CA	SETD2	0.83	1
PPP3CA	Amp_Xq28	0.83	1
PPP3CA	Del_3p26.2	0.83	1
PTPRU	Del_3q29	0.83	1
ROBO2	Del_9p23	0.83	1
SETD2	SLAMF9	0.83	1
SLAMF9	Del_3p26.2	0.83	1
SLAMF9	Del_21q11.2	0.83	1
1q-Amp	Del_19q13.33	0.83	1
3p-Del	Amp_1p34.3	0.83	1
Amp_8p11.21	Amp_Xq28	0.83	1
Amp_8p11.21	Del_3p26.2	0.83	1
Amp_17q12	Del_16q23.1	0.83	1
ABCB1	KCNQ5	0.831	1
ABCB1	ZNF608	0.831	1
ACVR1B	MMP16	0.831	1
ARID1A	Del_11q23.1	0.831	1
ATM	TPTE	0.831	1
BRAF	22q-Del	0.831	1
G3BP1	Amp_6p21.1	0.831	1
GAGE2A	Amp_12q15	0.831	1
KCNQ5	MMP16	0.831	1
MAP2	STIM1	0.831	1
MAP2	ZNF608	0.831	1
MAP2	Del_12q12	0.831	1
MGA	22q-Del	0.831	1
MMP16	ZNF608	0.831	1
NRAS	Amp_8q24.21	0.831	1
NUDT11	Amp_7p11.2	0.831	1
PHKA1	7p-Amp	0.831	1
PHKA1	Amp_20q13.33	0.831	1
RIT1	Amp_12q15	0.831	1
RPL5	Amp_12q15	0.831	1
SLAMF9	7p-Amp	0.831	1
STRA8	Amp_12q15	0.831	1
7p-Amp	Del_2q22.1	0.831	1
Amp_12p12.1	Del_10q26.3	0.831	1
Amp_17q23.1	Del_10p15.3	0.831	1
Amp_Xq28	Del_11q23.1	0.831	1
Amp_Xq28	Del_14q32.33	0.831	1
ARID1A	Amp_7q31.2	0.832	1
ARID1A	Del_5q12.1	0.832	1
CACNA1F	TPTE	0.832	1
SETD2	Amp_7q31.2	0.832	1
STK11	Amp_6p21.1	0.832	1
20q-Amp	Del_1p36.13	0.832	1
Amp_14q13.3	Del_5q31.1	0.832	1
Amp_19q12	Del_21q11.2	0.832	1
Amp_Xq28	Del_5q12.1	0.832	1
CDKN2A	8p-Del	0.833	1
NF1	RB1	0.833	1
NF1	Del_11q25	0.833	1
17q-Amp	8p-Del	0.833	1
EMG1	Del_1p36.13	0.834	1
GNAS	Amp_7p11.2	0.834	1
NLGN4X	20p-Amp	0.834	1
NLGN4X	Amp_22q11.22	0.834	1
NLRP5	Amp_1q21.3	0.834	1
NRAS	PIK3CA	0.834	1
NRAS	13q-Del	0.834	1
NRAS	Del_12p13.2	0.834	1
NUDT11	Del_1p36.13	0.834	1
PRKCG	Del_13q34	0.834	1
SMARCA4	Amp_5p13.1	0.834	1
STK19	Del_1p36.13	0.834	1
TCEAL5	TPTE	0.834	1
TPTE	Amp_13q33.3	0.834	1
20p-Amp	Del_13q34	0.834	1
8q-Amp	13q-Del	0.834	1
8q-Amp	Amp_10p15.1	0.834	1
17p-Del	Amp_5p13.1	0.834	1
MET	SIP1	0.835	1
PTPRU	17p-Del	0.835	1
SIP1	20q-Amp	0.835	1
SIP1	5q-Del	0.835	1
SMARCA4	TRERF1	0.835	1
TP53	Del_14q32.33	0.835	1
TRERF1	17p-Del	0.835	1
5p-Amp	Del_3p21.31	0.835	1
Amp_8q24.21	Amp_12q15	0.835	1
Del_9p21.3	Del_16q24.3	0.835	1
CDKN2A	PAPPA2	0.836	1
DNMT3A	NF1	0.836	1
ERBB2	7q-Amp	0.836	1
LRP1B	Amp_6p21.1	0.836	1
NLGN4X	RBM10	0.836	1
PAK1	STK11	0.836	1
PAPPA2	17q-Amp	0.836	1
PAPPA2	20p-Amp	0.836	1
PRKCG	Del_10q26.3	0.836	1
STK11	Del_12q12	0.836	1
U2AF1	ZEB1	0.836	1
20q-Amp	5p-Amp	0.836	1
CACNA1F	NFE2L2	0.837	1
EGFR	Del_16q23.1	0.837	1
GNAS	19q-Del	0.837	1
MMP16	Del_11q25	0.837	1
NLRP6	Del_6q14.3	0.837	1
PTPRU	Amp_20q13.33	0.837	1
RIT1	5p-Amp	0.837	1
RPL5	5p-Amp	0.837	1
SMAD4	7p-Amp	0.837	1
1p-Amp	Del_6q14.3	0.837	1
7p-Amp	15q-Del	0.837	1
7p-Amp	Del_11p15.5	0.837	1
22q-Del	Amp_13q33.3	0.837	1
Amp_13q33.3	Del_10p15.3	0.837	1
ACVR1B	BRAF	0.838	1
BRAF	STIM1	0.838	1
CXCR7	Amp_7q31.2	0.838	1
EPHB1	NLRP6	0.838	1
G3BP1	ROBO2	0.838	1
GAGE2A	Amp_12q14.1	0.838	1
KCNQ5	MGA	0.838	1
KCNQ5	Amp_3q26.2	0.838	1
KCNQ5	Del_9q21.11	0.838	1
KRAS	Del_9p23	0.838	1
MGA	PAK1	0.838	1
MGA	STIM1	0.838	1
MMP16	NF1	0.838	1
NLRP5	PIK3CA	0.838	1
NLRP6	Amp_7q31.2	0.838	1
NLRP6	Amp_19q12	0.838	1
NLRP6	Del_5q12.1	0.838	1
PAK1	Del_9q21.11	0.838	1
PAPPA2	Del_13q34	0.838	1
PIK3CA	Del_5q31.1	0.838	1
PIK3CA	Del_15q15.1	0.838	1
RIT1	Amp_12q14.1	0.838	1
ROBO2	STRA8	0.838	1
RPL5	Amp_12q14.1	0.838	1
STIM1	Del_9q21.11	0.838	1
STRA8	Amp_12q14.1	0.838	1
ZEB1	Del_6q14.3	0.838	1
1p-Amp	Amp_19q12	0.838	1
7p-Amp	17p-Del	0.838	1
7q-Amp	Del_6q14.3	0.838	1
17p-Del	Amp_20q13.33	0.838	1
Amp_3q26.2	Del_12q12	0.838	1
Amp_19q12	Del_12q24.33	0.838	1
Del_9p23	Del_14q32.33	0.838	1
ADAMTS19	PPP3CA	0.839	1
ADAMTS19	SLAMF9	0.839	1
CACNA1F	GNAS	0.839	1
GNAS	22q-Del	0.839	1
KEAP1	Del_1p36.13	0.839	1
MAP2	Amp_6p21.1	0.839	1
MMP16	Amp_6p21.1	0.839	1
OR2L13	RB1	0.839	1
PHKA1	19p-Del	0.839	1
RB1	Amp_18q11.2	0.839	1
SETD2	6q-Del	0.839	1
SLAMF9	Del_1p13.1	0.839	1
18p-Del	Amp_18q11.2	0.839	1
18p-Del	Del_11q25	0.839	1
19p-Del	Del_2q22.1	0.839	1
6q-Del	Amp_Xq28	0.839	1
6q-Del	Del_21q11.2	0.839	1
Amp_6p21.1	Del_Xp22.2	0.839	1
Amp_12q15	Del_Xp22.2	0.839	1
Del_1p13.1	Del_2q22.1	0.839	1
CDKN2A	8q-Amp	0.84	1
CDKN2A	Del_18q21.32	0.84	1
EPHA5	Amp_Xq28	0.84	1
EPHA5	Del_21q11.2	0.84	1
ERBB2	Del_17p13.3	0.84	1
FTSJD1	Del_13q34	0.84	1
KRAS	Amp_14q13.3	0.84	1
LRP1B	Amp_8p11.21	0.84	1
NLGN4X	3p-Del	0.84	1
NLGN4X	Del_19p13.3	0.84	1
NRAS	22q-Del	0.84	1
NRAS	Del_10p15.3	0.84	1
PDGFRA	Amp_12q14.1	0.84	1
PRKCG	8q-Amp	0.84	1
RB1	Amp_5p15.33	0.84	1
ROBO2	ZEB1	0.84	1
ROBO2	7q-Amp	0.84	1
ROBO2	Del_4q34.3	0.84	1
SMARCA4	Del_16q24.3	0.84	1
U2AF1	Del_13q12.11	0.84	1
17q-Amp	Del_18q21.32	0.84	1
5p-Amp	Del_6q14.3	0.84	1
18q-Del	Amp_10p15.1	0.84	1
Amp_5p15.33	Del_11q25	0.84	1
Amp_20q13.33	Del_19q13.33	0.84	1
ABCB1	Del_18q21.32	0.841	1
ADAMTS19	Del_17p13.3	0.841	1
ARID2	PIK3CA	0.841	1
ARID2	13q-Del	0.841	1
FCRLA	Del_14q32.33	0.841	1
FTSJD1	13q-Del	0.841	1
MMP16	Del_18q21.32	0.841	1
PIK3CA	3p-Del	0.841	1
1q-Amp	Amp_12q14.1	0.841	1
20q-Amp	Del_4q34.3	0.841	1
Amp_1p34.3	Del_Xp22.2	0.841	1
Amp_4q12	Amp_6p21.1	0.841	1
Amp_5p13.1	Del_16q23.1	0.841	1
Del_3q11.1	Del_11q23.1	0.841	1
Del_3q11.1	Del_14q32.33	0.841	1
ABCB1	Amp_7q31.2	0.842	1
ABCB1	Del_3p21.31	0.842	1
ABCB1	Del_5q12.1	0.842	1
ACVR1B	STIM1	0.842	1
ACVR1B	ZNF608	0.842	1
ADAMTS19	PAPPA2	0.842	1
APC	SIP1	0.842	1
ATM	PRKCG	0.842	1
ATM	17q-Amp	0.842	1
ATM	20p-Amp	0.842	1
CSMD3	Del_18q23	0.842	1
KCNQ5	PAK1	0.842	1
KCNQ5	STIM1	0.842	1
KCNQ5	ZNF608	0.842	1
KCNQ5	Del_12q12	0.842	1
MAP2	Amp_7q31.2	0.842	1
MAP2	Del_5q12.1	0.842	1
MMP16	Amp_7q31.2	0.842	1
OR2L13	Del_9p21.3	0.842	1
PAK1	STIM1	0.842	1
SIP1	Del_3q29	0.842	1
SLC4A3	Del_8p23.2	0.842	1
STIM1	ZNF608	0.842	1
ZNF608	Del_12q12	0.842	1
Amp_10p15.1	Del_18q23	0.842	1
Del_10p15.3	Del_15q11.2	0.842	1
CDKN2A	EMG1	0.843	1
CDKN2A	NUDT11	0.843	1
CDKN2A	STK19	0.843	1
CDKN2A	Amp_5p13.1	0.843	1
CSMD3	Del_16q23.1	0.843	1
CTNNB1	PTPRU	0.843	1
CXCR7	G3BP1	0.843	1
CXCR7	GAGE2A	0.843	1
CXCR7	RIT1	0.843	1
CXCR7	RPL5	0.843	1
CXCR7	STRA8	0.843	1
DNMT3A	PTPRU	0.843	1
DNMT3A	SMAD4	0.843	1
DNMT3A	15q-Del	0.843	1
EMG1	PRKCG	0.843	1
EMG1	17q-Amp	0.843	1
EMG1	20p-Amp	0.843	1
EMG1	Amp_22q11.22	0.843	1
G3BP1	NLRP6	0.843	1
G3BP1	1p-Amp	0.843	1
G3BP1	Del_12q24.33	0.843	1
GAGE2A	NLRP6	0.843	1
GAGE2A	1p-Amp	0.843	1
GAGE2A	Del_12q24.33	0.843	1
MAP2	Amp_1q21.3	0.843	1
NLRP6	RPL5	0.843	1
NLRP6	STRA8	0.843	1
NUDT11	PRKCG	0.843	1
NUDT11	17q-Amp	0.843	1
NUDT11	20p-Amp	0.843	1
NUDT11	Amp_22q11.22	0.843	1
PIK3CA	9p-Del	0.843	1
RIT1	1p-Amp	0.843	1
RIT1	Del_12q24.33	0.843	1
ROBO2	Del_9p21.3	0.843	1
RPL5	1p-Amp	0.843	1
STK19	17q-Amp	0.843	1
STK19	20p-Amp	0.843	1
STRA8	1p-Amp	0.843	1
STRA8	Del_12q24.33	0.843	1
TGFBR3	Amp_12p12.1	0.843	1
5p-Amp	Del_2q22.1	0.843	1
Amp_18q11.2	Del_6q14.3	0.843	1
Del_1p13.1	Del_14q32.33	0.843	1
NF1	Del_8p23.2	0.844	1
NLGN4X	STRA8	0.844	1
STRA8	Del_13q34	0.844	1
7p-Amp	8p-Del	0.844	1
Amp_6p21.1	Amp_17q12	0.844	1
Amp_6p21.1	Del_19q13.33	0.844	1
Amp_8p11.21	Del_Xp22.2	0.844	1
Amp_8q24.21	Del_19q13.33	0.844	1
ACVR1B	SMARCA4	0.845	1
CTNNB1	EPHB1	0.845	1
CTNNB1	Amp_7q31.2	0.845	1
DNMT3A	EPHB1	0.845	1
DNMT3A	Del_3p21.31	0.845	1
EPHA3	Del_16q23.1	0.845	1
EPHA5	Del_13q34	0.845	1
ERBB2	Amp_17q12	0.845	1
FCRLA	KRAS	0.845	1
NLRP5	15q-Del	0.845	1
NLRP5	Del_11p15.5	0.845	1
NRAS	OR2L13	0.845	1
NRAS	RB1	0.845	1
NRAS	18p-Del	0.845	1
NRAS	Amp_18q11.2	0.845	1
NRAS	Del_11q25	0.845	1
PAK1	SMARCA4	0.845	1
RBM10	Del_9p21.3	0.845	1
SLC4A3	Del_15q15.1	0.845	1
SMAD4	Del_15q15.1	0.845	1
STIM1	Del_15q11.2	0.845	1
ZNF608	Del_15q11.2	0.845	1
Amp_11q13.3	Del_3p26.2	0.845	1
Amp_Xq28	Del_16q23.1	0.845	1
Del_11p15.5	Del_15q15.1	0.845	1
MAP2	Amp_5p15.33	0.846	1
NLRP6	Del_16q23.1	0.846	1
OR2L13	Amp_13q33.3	0.846	1
PAK1	Del_9p21.3	0.846	1
Del_9p21.3	Del_12q12	0.846	1
ADAMTS19	Del_5q12.1	0.847	1
APC	RBM10	0.847	1
CDKN2A	Del_18q23	0.847	1
LRP1B	7p-Amp	0.847	1
OR2L13	Amp_3q26.2	0.847	1
PIK3CA	TP53	0.847	1
RB1	Amp_17q23.1	0.847	1
RB1	Del_9q21.11	0.847	1
SIP1	5p-Amp	0.847	1
TP53	Del_12p13.2	0.847	1
20p-Amp	Del_6q26	0.847	1
5p-Amp	Amp_12q14.1	0.847	1
7p-Amp	3p-Del	0.847	1
19p-Del	Amp_7q31.2	0.847	1
Amp_7q31.2	Del_1p13.1	0.847	1
Amp_17q23.1	Amp_18q11.2	0.847	1
Amp_22q11.22	Del_6q26	0.847	1
Amp_Xq28	Del_10q26.3	0.847	1
ARID2	21q-Del	0.848	1
BRAF	8p-Del	0.848	1
FAM65C	3p-Del	0.848	1
FCRLA	Amp_14q13.3	0.848	1
FTSJD1	SRPX	0.848	1
FTSJD1	TGFBR3	0.848	1
FTSJD1	WT1	0.848	1
FTSJD1	19q-Del	0.848	1
FTSJD1	21q-Del	0.848	1
FTSJD1	Del_4q22.1	0.848	1
MET	PRKCG	0.848	1
MET	20p-Amp	0.848	1
PHKA1	13q-Del	0.848	1
PIK3CA	PPP3CA	0.848	1
PPP3CA	13q-Del	0.848	1
SLAMF9	Del_12p13.2	0.848	1
SRPX	3p-Del	0.848	1
TGFBR3	Del_8p23.2	0.848	1
WDR66	3p-Del	0.848	1
WDR66	Del_8p23.2	0.848	1
17q-Amp	20q-Amp	0.848	1
20p-Amp	5q-Del	0.848	1
13q-Del	Del_2q22.1	0.848	1
8p-Del	Amp_3q26.2	0.848	1
Amp_4q12	Amp_14q13.3	0.848	1
Amp_5p15.33	Del_11q23.1	0.848	1
Amp_13q33.3	Del_19p13.3	0.848	1
Amp_14q13.3	Del_3q11.1	0.848	1
Amp_19q12	Del_13q12.11	0.848	1
Del_2q22.1	Del_12p13.2	0.848	1
LRP1B	Amp_11q13.3	0.849	1
SRPX	Amp_7p11.2	0.849	1
WDR66	Amp_7p11.2	0.849	1
1q-Amp	Amp_Xq28	0.849	1
1q-Amp	Del_3p26.2	0.849	1
Amp_12q14.1	Del_14q32.33	0.849	1
ATM	G3BP1	0.85	1
ATM	RIT1	0.85	1
ATM	Amp_8p11.21	0.85	1
CDKN2A	EPHA3	0.85	1
CDKN2A	Del_19p13.2	0.85	1
CTNNB1	SIP1	0.85	1
DNMT3A	SIP1	0.85	1
EPHA3	PRKCG	0.85	1
EPHA3	17q-Amp	0.85	1
NF1	SLAMF9	0.85	1
NLGN4X	Del_19p13.2	0.85	1
WT1	18q-Del	0.85	1
17q-Amp	Del_19p13.2	0.85	1
20q-Amp	8p-Del	0.85	1
18q-Del	21q-Del	0.85	1
BRAF	5p-Amp	0.851	1
GNAS	NRAS	0.851	1
GNAS	5p-Amp	0.851	1
KCNQ5	Del_5q31.1	0.851	1
KCNQ5	Del_15q15.1	0.851	1
KCNQ5	Del_16q24.3	0.851	1
MET	Amp_12p12.1	0.851	1
MMP16	Del_18q23	0.851	1
NLGN4X	ZEB1	0.851	1
NLRP5	ZNF608	0.851	1
RB1	TPTE	0.851	1
STIM1	Del_16q24.3	0.851	1
TPTE	Amp_18q11.2	0.851	1
ZNF608	Del_15q15.1	0.851	1
ZNF608	Del_16q24.3	0.851	1
5p-Amp	Amp_3q26.2	0.851	1
7q-Amp	Del_13q34	0.851	1
Del_12q12	Del_16q24.3	0.851	1
CTNNB1	TPTE	0.852	1
EMG1	3q-Del	0.852	1
EMG1	Amp_1p34.3	0.852	1
EMG1	Amp_4q12	0.852	1
EMG1	Del_3q11.1	0.852	1
FCRLA	STK19	0.852	1
GNAS	OR2L13	0.852	1
GNAS	18p-Del	0.852	1
GNAS	Amp_18q11.2	0.852	1
GNAS	Del_11q25	0.852	1
NF1	PDGFRA	0.852	1
NF1	ZEB1	0.852	1
NF1	7q-Amp	0.852	1
NF1	Del_4q34.3	0.852	1
NLGN4X	Del_22q13.32	0.852	1
NLRP6	8p-Del	0.852	1
NUDT11	3q-Del	0.852	1
NUDT11	Amp_1p34.3	0.852	1
NUDT11	Amp_4q12	0.852	1
NUDT11	Del_3q11.1	0.852	1
STK11	Del_11q23.1	0.852	1
STK19	3q-Del	0.852	1
STK19	Amp_1p34.3	0.852	1
3q-Del	Amp_10p15.1	0.852	1
Amp_4q12	Del_10q26.3	0.852	1
ARID1A	ERBB2	0.853	1
ARID2	22q-Del	0.853	1
ARID2	Del_10p15.3	0.853	1
CACNA1F	FTSJD1	0.853	1
ERBB2	Del_3p26.2	0.853	1
FAM65C	Amp_1q21.3	0.853	1
FTSJD1	22q-Del	0.853	1
GNAS	NF1	0.853	1
KRAS	MMP16	0.853	1
MGA	Amp_6p21.1	0.853	1
NLRP5	Del_16q24.3	0.853	1
NLRP6	RBM10	0.853	1
PRKCG	5p-Amp	0.853	1
STK11	15q-Del	0.853	1
TGFBR3	Amp_1q21.3	0.853	1
U2AF1	Amp_Xq28	0.853	1
WT1	Amp_1q21.3	0.853	1
1p-Amp	9q-Del	0.853	1
20p-Amp	5p-Amp	0.853	1
Amp_7p11.2	Amp_19q12	0.853	1
Amp_20q13.33	Del_19p13.3	0.853	1
Del_10p15.3	Del_16q24.3	0.853	1
LRP1B	20q-Amp	0.854	1
NF1	Amp_17q23.1	0.854	1
1q-Amp	Del_1p36.13	0.854	1
BRAF	EPHB1	0.855	1
BRAF	Amp_19q12	0.855	1
BRAF	Del_3p21.31	0.855	1
CACNA1F	Del_18q21.32	0.855	1
CDKN2A	LRP1B	0.855	1
CTNNB1	Del_16q23.1	0.855	1
DNMT3A	Del_16q23.1	0.855	1
EPHA3	G3BP1	0.855	1
EPHA3	RPL5	0.855	1
EPHA3	STRA8	0.855	1
GAGE2A	Del_19p13.2	0.855	1
KEAP1	20q-Amp	0.855	1
KEAP1	5q-Del	0.855	1
LRP1B	20p-Amp	0.855	1
RIT1	Del_19p13.2	0.855	1
STRA8	Del_19p13.2	0.855	1
1q-Amp	Del_18q23	0.855	1
Amp_3q26.2	Amp_7q31.2	0.855	1
Amp_7p11.2	Del_12q12	0.855	1
Amp_12q14.1	Amp_17q12	0.855	1
Amp_17q23.1	Del_5q12.1	0.855	1
Del_12p13.2	Del_14q32.33	0.855	1
ABCB1	Amp_11q13.3	0.856	1
ADAMTS19	18q-Del	0.856	1
FCRLA	Del_13q34	0.856	1
GNAS	TCEAL5	0.856	1
GNAS	Amp_13q33.3	0.856	1
KEAP1	9p-Del	0.856	1
KEAP1	Amp_12q15	0.856	1
NLGN4X	1q-Amp	0.856	1
PDGFRA	TTN	0.856	1
ZEB1	Amp_17q12	0.856	1
7q-Amp	Amp_17q12	0.856	1
7q-Amp	Del_19q13.33	0.856	1
18q-Del	19p-Del	0.856	1
Amp_8q24.21	Del_19p13.3	0.856	1
Del_3q11.1	Del_13q34	0.856	1
ARID1A	RBM10	0.857	1
ARID2	NRAS	0.857	1
BRAF	EGFR	0.857	1
CACNA1F	Del_2q22.1	0.857	1
EGFR	Del_12q24.33	0.857	1
FTSJD1	NRAS	0.857	1
KEAP1	SLAMF9	0.857	1
NLRP6	Del_18q21.32	0.857	1
NRAS	3p-Del	0.857	1
NRAS	Amp_5p13.1	0.857	1
PHKA1	Del_10p15.3	0.857	1
PPP3CA	22q-Del	0.857	1
PPP3CA	Del_10p15.3	0.857	1
PTPRU	SIP1	0.857	1
PTPRU	SLC4A3	0.857	1
PTPRU	SMAD4	0.857	1
RBM10	Amp_Xq28	0.857	1
SIP1	TRERF1	0.857	1
SIP1	15q-Del	0.857	1
SLAMF9	Del_10p15.3	0.857	1
SLC4A3	SMAD4	0.857	1
SMAD4	TRERF1	0.857	1
SMAD4	15q-Del	0.857	1
8q-Amp	Amp_3q26.2	0.857	1
6q-Del	Del_9p21.3	0.857	1
Del_3q29	Del_4q34.3	0.857	1
ABCB1	PRKCG	0.858	1
ACVR1B	GAGE2A	0.858	1
ACVR1B	RIT1	0.858	1
ACVR1B	RPL5	0.858	1
ACVR1B	STRA8	0.858	1
ADAMTS19	Del_10q26.3	0.858	1
CDKN2A	MMP16	0.858	1
G3BP1	KCNQ5	0.858	1
G3BP1	PAK1	0.858	1
G3BP1	STIM1	0.858	1
G3BP1	ZNF608	0.858	1
G3BP1	Del_12q12	0.858	1
GAGE2A	KCNQ5	0.858	1
GAGE2A	PAK1	0.858	1
GAGE2A	STIM1	0.858	1
GAGE2A	ZNF608	0.858	1
GAGE2A	Del_12q12	0.858	1
KCNQ5	RPL5	0.858	1
KCNQ5	STRA8	0.858	1
MAP2	PRKCG	0.858	1
MAP2	Amp_22q11.22	0.858	1
NLGN4X	Del_14q32.33	0.858	1
NLGN4X	Del_Xp22.2	0.858	1
OR2L13	SMARCA4	0.858	1
PAK1	RIT1	0.858	1
PAK1	RPL5	0.858	1
PAK1	STRA8	0.858	1
RBM10	STK11	0.858	1
RIT1	STIM1	0.858	1
RIT1	ZNF608	0.858	1
RPL5	STIM1	0.858	1
RPL5	ZNF608	0.858	1
SLAMF9	Amp_5p15.33	0.858	1
SMARCA4	Amp_18q11.2	0.858	1
SRPX	Del_11q23.1	0.858	1
SRPX	Del_Xp22.2	0.858	1
STIM1	STRA8	0.858	1
STRA8	Del_12q12	0.858	1
TGFBR3	Del_11q23.1	0.858	1
TGFBR3	Del_14q32.33	0.858	1
7p-Amp	Del_3p26.2	0.858	1
18p-Del	Del_15q11.2	0.858	1
19p-Del	Amp_11q13.3	0.858	1
19p-Del	Del_10q26.3	0.858	1
19q-Del	Del_Xp22.2	0.858	1
21q-Del	Del_Xp22.2	0.858	1
Amp_1q21.3	Del_8p23.2	0.858	1
Amp_10p15.1	Amp_12q15	0.858	1
Amp_12q15	Del_10q26.3	0.858	1
Amp_18q11.2	Del_15q11.2	0.858	1
Amp_20q13.33	Del_3p26.2	0.858	1
CDKN2A	Del_17p13.3	0.859	1
GAGE2A	Amp_1q21.3	0.859	1
NF1	SMAD4	0.859	1
NF1	15q-Del	0.859	1
RPL5	Amp_1q21.3	0.859	1
20p-Amp	Del_13q12.11	0.859	1
7p-Amp	Del_9p21.3	0.859	1
Amp_8q24.21	Del_9p23	0.859	1
Amp_22q11.22	Del_13q12.11	0.859	1
APC	PRKCG	0.86	1
APC	Amp_22q11.22	0.86	1
CXCR7	Del_4q34.3	0.86	1
DNMT3A	Amp_5p13.1	0.86	1
KEAP1	Amp_19q12	0.86	1
KRAS	8p-Del	0.86	1
NLRP6	PDGFRA	0.86	1
NLRP6	7q-Amp	0.86	1
PIK3CA	Del_13q12.11	0.86	1
ZEB1	1p-Amp	0.86	1
ZEB1	Del_12q24.33	0.86	1
1p-Amp	Del_4q34.3	0.86	1
ABCB1	G3BP1	0.861	1
ABCB1	GAGE2A	0.861	1
ABCB1	TPTE	0.861	1
ADAMTS19	U2AF1	0.861	1
ARID1A	TTN	0.861	1
EGFR	STK19	0.861	1
EMG1	FAM65C	0.861	1
EMG1	SRPX	0.861	1
EMG1	WDR66	0.861	1
EMG1	WT1	0.861	1
EMG1	8q-Amp	0.861	1
EMG1	19q-Del	0.861	1
EMG1	21q-Del	0.861	1
EMG1	Del_4q22.1	0.861	1
EPHB1	Del_12p13.2	0.861	1
ERBB2	Del_1p13.1	0.861	1
FAM65C	NUDT11	0.861	1
G3BP1	MAP2	0.861	1
GAGE2A	MAP2	0.861	1
MAP2	RIT1	0.861	1
MAP2	RPL5	0.861	1
MMP16	STRA8	0.861	1
NLRP6	Del_8p23.2	0.861	1
NUDT11	SRPX	0.861	1
NUDT11	TGFBR3	0.861	1
NUDT11	WDR66	0.861	1
NUDT11	WT1	0.861	1
NUDT11	8q-Amp	0.861	1
NUDT11	19q-Del	0.861	1
NUDT11	21q-Del	0.861	1
NUDT11	Del_4q22.1	0.861	1
OR2L13	Amp_5p13.1	0.861	1
PIK3CA	Del_5q12.1	0.861	1
SRPX	STK19	0.861	1
STK19	TGFBR3	0.861	1
STK19	WDR66	0.861	1
STK19	19q-Del	0.861	1
STK19	21q-Del	0.861	1
STK19	Del_4q22.1	0.861	1
STK19	Del_18q21.32	0.861	1
TTN	Amp_Xq28	0.861	1
1p-Amp	Del_8p23.2	0.861	1
13q-Del	Amp_7q31.2	0.861	1
13q-Del	Del_5q12.1	0.861	1
Amp_6p21.1	Del_18q21.32	0.861	1
Amp_7q31.2	Del_12p13.2	0.861	1
ABCB1	Amp_14q13.3	0.862	1
ARID1A	5q-Del	0.862	1
ATM	Del_4q34.3	0.862	1
ATM	Del_19p13.2	0.862	1
EPHA5	KRAS	0.862	1
ERBB2	Amp_20q13.33	0.862	1
MAP2	Amp_14q13.3	0.862	1
MET	Amp_Xq28	0.862	1
NLRP6	Del_18q23	0.862	1
NRAS	Del_11q23.1	0.862	1
NRAS	Del_14q32.33	0.862	1
1p-Amp	Del_6q26	0.862	1
1p-Amp	Del_18q23	0.862	1
20q-Amp	Del_3p26.2	0.862	1
Amp_12p12.1	Del_12p13.2	0.862	1
Del_6q26	Del_12q24.33	0.862	1
ABCB1	NLGN4X	0.863	1
ABCB1	Del_13q34	0.863	1
EPHB1	SLC4A3	0.863	1
EPHB1	SMAD4	0.863	1
EPHB1	Del_11p15.5	0.863	1
FCRLA	MET	0.863	1
GNAS	Amp_3q26.2	0.863	1
GNAS	Amp_17q23.1	0.863	1
KEAP1	TTN	0.863	1
MAP2	NLGN4X	0.863	1
NLRP5	Del_1p36.13	0.863	1
PTPRU	Amp_7q31.2	0.863	1
TRERF1	Amp_7q31.2	0.863	1
20q-Amp	3q-Del	0.863	1
20q-Amp	Del_3q11.1	0.863	1
Amp_20q13.33	Del_9p23	0.863	1
Del_1p36.13	Del_15q15.1	0.863	1
ACVR1B	Amp_7q31.2	0.864	1
ARID1A	KEAP1	0.864	1
ATM	3q-Del	0.864	1
ATM	Amp_4q12	0.864	1
CTNNB1	9q-Del	0.864	1
EPHB1	STIM1	0.864	1
FAM65C	Amp_12q15	0.864	1
KCNQ5	Amp_7q31.2	0.864	1
KCNQ5	Del_5q12.1	0.864	1
KEAP1	Del_3p26.2	0.864	1
PAK1	Amp_19q12	0.864	1
RBM10	Del_6q26	0.864	1
ROBO2	Del_9q21.11	0.864	1
SRPX	Amp_12q15	0.864	1
STIM1	Del_3p21.31	0.864	1
TGFBR3	Amp_6p21.1	0.864	1
TGFBR3	Amp_12q15	0.864	1
ZNF608	Amp_7q31.2	0.864	1
Amp_1q21.3	Del_14q32.33	0.864	1
Amp_6p21.1	Del_4q22.1	0.864	1
NLRP5	PAPPA2	0.865	1
PAPPA2	Amp_5p13.1	0.865	1
STK19	Del_6q26	0.865	1
Amp_8p11.21	Del_10q26.3	0.865	1
Amp_8p11.21	Del_19p13.2	0.865	1
Amp_17q12	Del_13q34	0.865	1
BRAF	17q-Amp	0.866	1
CDKN2A	Amp_8p11.21	0.866	1
EPHA5	Amp_7q31.2	0.866	1
EPHA5	Del_6q14.3	0.866	1
ERBB2	PAPPA2	0.866	1
FTSJD1	TCEAL5	0.866	1
OR2L13	SLAMF9	0.866	1
PHKA1	Amp_18q11.2	0.866	1
PHKA1	Del_11q25	0.866	1
RB1	SLAMF9	0.866	1
RB1	8p-Del	0.866	1
SLAMF9	18p-Del	0.866	1
SMARCA4	Amp_7q31.2	0.866	1
SMARCA4	Del_3p21.31	0.866	1
TCEAL5	3p-Del	0.866	1
17q-Amp	Amp_3q26.2	0.866	1
13q-Del	Amp_5p15.33	0.866	1
17p-Del	Amp_19q12	0.866	1
3q-Del	Del_9p21.3	0.866	1
8p-Del	Amp_12q14.1	0.866	1
Amp_7q31.2	Del_15q11.2	0.866	1
Amp_12q15	Del_15q11.2	0.866	1
Del_3q11.1	Del_9p21.3	0.866	1
APC	Del_19q13.33	0.867	1
ATM	Del_6q14.3	0.867	1
ATM	Del_Xp22.2	0.867	1
BRAF	RPL5	0.867	1
BRAF	STRA8	0.867	1
BRAF	Del_18q23	0.867	1
CACNA1F	Del_14q32.33	0.867	1
CACNA1F	Del_Xp22.2	0.867	1
FCRLA	Del_18q21.32	0.867	1
G3BP1	Amp_3q26.2	0.867	1
G3BP1	Del_9q21.11	0.867	1
GNAS	Del_8p23.2	0.867	1
RBM10	Del_8p23.2	0.867	1
RIT1	Amp_17q23.1	0.867	1
RIT1	Del_9q21.11	0.867	1
RPL5	Amp_3q26.2	0.867	1
STRA8	Amp_17q23.1	0.867	1
TPTE	18q-Del	0.867	1
7p-Amp	Del_Xp22.2	0.867	1
Amp_3q26.2	Del_18q23	0.867	1
Amp_4q12	Del_18q21.32	0.867	1
Amp_17q23.1	Del_6q26	0.867	1
Del_3q11.1	Del_18q21.32	0.867	1
Del_10p15.3	Del_11q23.1	0.867	1
FAM65C	Del_10q26.3	0.868	1
MGA	Del_16q23.1	0.868	1
NLRP5	18p-Del	0.868	1
NLRP5	Del_8p23.2	0.868	1
NLRP6	Del_19q13.33	0.868	1
NRAS	Amp_10p15.1	0.868	1
NRAS	Del_10q26.3	0.868	1
OR2L13	Del_16q24.3	0.868	1
PAPPA2	Del_3q11.1	0.868	1
PPP3CA	Amp_5p13.1	0.868	1
SETD2	ZEB1	0.868	1
SETD2	7q-Amp	0.868	1
SRPX	Del_10q26.3	0.868	1
ZEB1	Amp_Xq28	0.868	1
1p-Amp	Amp_17q12	0.868	1
1p-Amp	Del_19q13.33	0.868	1
18p-Del	Del_16q24.3	0.868	1
Amp_1q21.3	Amp_3q26.2	0.868	1
Amp_10p15.1	Del_4q22.1	0.868	1
Amp_14q13.3	Amp_17q12	0.868	1
Amp_17q12	Del_12q24.33	0.868	1
Amp_17q23.1	Del_16q23.1	0.868	1
Amp_18q11.2	Del_5q31.1	0.868	1
Del_12q24.33	Del_19q13.33	0.868	1
ABCB1	ARID2	0.869	1
ABCB1	3p-Del	0.869	1
ERBB2	Amp_8q24.21	0.869	1
FAM65C	TP53	0.869	1
MMP16	3p-Del	0.869	1
PIK3CA	Del_10q26.3	0.869	1
RB1	Amp_1q21.3	0.869	1
RIT1	Del_9p23	0.869	1
SMARCA4	TP53	0.869	1
TP53	Del_4q22.1	0.869	1
TP53	Del_15q11.2	0.869	1
20q-Amp	Del_8p23.2	0.869	1
13q-Del	Amp_10p15.1	0.869	1
6q-Del	Del_9p23	0.869	1
ABCB1	RBM10	0.87	1
ADAMTS19	RBM10	0.87	1
ADAMTS19	9q-Del	0.87	1
FAM65C	Amp_8q24.21	0.87	1
PDGFRA	TPTE	0.87	1
SLC4A3	Del_1p36.13	0.87	1
SMAD4	Del_1p36.13	0.87	1
TPTE	ZEB1	0.87	1
Amp_8q24.21	Del_4q22.1	0.87	1
Amp_12q14.1	Amp_Xq28	0.87	1
Del_1p36.13	Del_11p15.5	0.87	1
ACVR1B	Amp_11q13.3	0.871	1
ACVR1B	Del_16q23.1	0.871	1
CDKN2A	CTNNB1	0.871	1
CTNNB1	PRKCG	0.871	1
CTNNB1	20p-Amp	0.871	1
CTNNB1	Amp_22q11.22	0.871	1
DNMT3A	17q-Amp	0.871	1
DNMT3A	20p-Amp	0.871	1
EMG1	NFE2L2	0.871	1
EMG1	TCEAL5	0.871	1
EMG1	Amp_13q33.3	0.871	1
EPHA3	FCRLA	0.871	1
EPHA3	3q-Del	0.871	1
EPHA3	Amp_4q12	0.871	1
EPHA3	Del_3q11.1	0.871	1
FAM65C	ROBO2	0.871	1
FAM65C	Amp_12q14.1	0.871	1
FTSJD1	NF1	0.871	1
KCNQ5	Amp_11q13.3	0.871	1
KCNQ5	Del_16q23.1	0.871	1
NFE2L2	NUDT11	0.871	1
NFE2L2	STK19	0.871	1
NUDT11	TCEAL5	0.871	1
NUDT11	Amp_13q33.3	0.871	1
PAK1	Del_16q23.1	0.871	1
PDGFRA	Del_9p21.3	0.871	1
PIK3CA	18q-Del	0.871	1
ROBO2	WT1	0.871	1
ROBO2	Del_4q22.1	0.871	1
RPL5	Amp_8q24.21	0.871	1
SLC4A3	Amp_11q13.3	0.871	1
SRPX	Amp_12q14.1	0.871	1
STIM1	Amp_11q13.3	0.871	1
STIM1	Del_16q23.1	0.871	1
STK19	TCEAL5	0.871	1
STRA8	Amp_8q24.21	0.871	1
TGFBR3	Amp_12q14.1	0.871	1
TRERF1	Amp_11q13.3	0.871	1
TRERF1	Del_16q23.1	0.871	1
ZNF608	Amp_11q13.3	0.871	1
ZNF608	Del_16q23.1	0.871	1
15q-Del	Amp_11q13.3	0.871	1
21q-Del	Amp_12q14.1	0.871	1
Amp_4q12	Del_19p13.2	0.871	1
Amp_8q24.21	Amp_Xq28	0.871	1
Amp_11q13.3	Del_11p15.5	0.871	1
Amp_11q13.3	Del_12q12	0.871	1
Del_3q11.1	Del_19p13.2	0.871	1
Del_4q34.3	Del_9p21.3	0.871	1
CDKN2A	SIP1	0.872	1
EGFR	Amp_5p15.33	0.872	1
EPHA3	PDGFRA	0.872	1
EPHA3	Del_4q34.3	0.872	1
GNAS	SMARCA4	0.872	1
NLRP6	Del_13q12.11	0.872	1
PDGFRA	Del_18q21.32	0.872	1
PRKCG	SIP1	0.872	1
SIP1	20p-Amp	0.872	1
SIP1	Amp_22q11.22	0.872	1
STK11	Amp_12p12.1	0.872	1
STK19	Del_13q12.11	0.872	1
STK19	Del_17p13.3	0.872	1
ZEB1	8q-Amp	0.872	1
1p-Amp	Del_13q12.11	0.872	1
1p-Amp	Del_17p13.3	0.872	1
Del_12q24.33	Del_17p13.3	0.872	1
CTNNB1	PAPPA2	0.873	1
CTNNB1	PDGFRA	0.873	1
CTNNB1	ZEB1	0.873	1
DNMT3A	ZEB1	0.873	1
DNMT3A	Del_4q34.3	0.873	1
G3BP1	GAGE2A	0.873	1
G3BP1	RIT1	0.873	1
G3BP1	RPL5	0.873	1
G3BP1	STRA8	0.873	1
G3BP1	Del_15q11.2	0.873	1
GAGE2A	RPL5	0.873	1
GAGE2A	SMARCA4	0.873	1
GAGE2A	STRA8	0.873	1
GAGE2A	TTN	0.873	1
KEAP1	Del_18q23	0.873	1
MAP2	Amp_5p13.1	0.873	1
MGA	Del_9p21.3	0.873	1
PAK1	Del_6q14.3	0.873	1
RIT1	RPL5	0.873	1
RIT1	STRA8	0.873	1
RIT1	TTN	0.873	1
RIT1	Del_15q11.2	0.873	1
RPL5	SMARCA4	0.873	1
RPL5	STRA8	0.873	1
RPL5	TTN	0.873	1
SMAD4	TPTE	0.873	1
STRA8	Del_15q11.2	0.873	1
TPTE	15q-Del	0.873	1
Amp_8p11.21	Del_16q23.1	0.873	1
ADAMTS19	Amp_1q21.3	0.874	1
CACNA1F	Amp_19q12	0.874	1
CACNA1F	Del_5q12.1	0.874	1
CDKN2A	17p-Del	0.874	1
CTNNB1	Del_22q13.32	0.874	1
GNAS	PPP3CA	0.874	1
MET	NRAS	0.874	1
NRAS	20q-Amp	0.874	1
OR2L13	8q-Amp	0.874	1
PHKA1	Del_19p13.3	0.874	1
PRKCG	Del_15q11.2	0.874	1
RB1	8q-Amp	0.874	1
ROBO2	6q-Del	0.874	1
SLAMF9	Del_19p13.3	0.874	1
TPTE	Amp_3q26.2	0.874	1
8q-Amp	Del_11q25	0.874	1
22q-Del	Amp_19q12	0.874	1
Amp_1p34.3	Del_3q29	0.874	1
Amp_14q13.3	Del_3p21.31	0.874	1
ADAMTS19	Amp_20q13.33	0.875	1
ARID1A	NLRP6	0.875	1
ATM	Amp_17q12	0.875	1
BRAF	NLGN4X	0.875	1
KEAP1	Del_9q21.11	0.875	1
LRP1B	SLC4A3	0.875	1
LRP1B	SMAD4	0.875	1
NLRP6	Del_3p26.2	0.875	1
TCEAL5	Del_Xp22.2	0.875	1
TTN	Amp_4q12	0.875	1
TTN	Del_3q11.1	0.875	1
1q-Amp	Amp_7q31.2	0.875	1
1q-Amp	Del_3p21.31	0.875	1
Amp_Xq28	Del_12q24.33	0.875	1
Del_12q24.33	Del_21q11.2	0.875	1
NUDT11	Amp_1q21.3	0.876	1
NUDT11	Amp_8p11.21	0.876	1
TRERF1	Amp_7p11.2	0.876	1
Amp_5p13.1	Del_19p13.3	0.876	1
Amp_7p11.2	Del_11p15.5	0.876	1
APC	Amp_Xq28	0.877	1
ARID1A	Del_3q29	0.877	1
EPHB1	NLRP5	0.877	1
ERBB2	Del_10p15.3	0.877	1
FTSJD1	GNAS	0.877	1
G3BP1	STK11	0.877	1
GNAS	3p-Del	0.877	1
KCNQ5	9q-Del	0.877	1
NLGN4X	TGFBR3	0.877	1
NLGN4X	Del_4q22.1	0.877	1
NLRP5	Amp_7q31.2	0.877	1
PAK1	9q-Del	0.877	1
RPL5	STK11	0.877	1
STK11	STRA8	0.877	1
TRERF1	Del_9p21.3	0.877	1
U2AF1	Del_10p15.3	0.877	1
WDR66	Del_13q34	0.877	1
15q-Del	Del_9p21.3	0.877	1
18q-Del	Del_3q29	0.877	1
Amp_7q31.2	Del_16q24.3	0.877	1
Amp_8p11.21	Del_12q24.33	0.877	1
Amp_12q14.1	Del_15q11.2	0.877	1
ABCB1	FCRLA	0.878	1
ABCB1	3q-Del	0.878	1
ACVR1B	TP53	0.878	1
ARID2	BRAF	0.878	1
ARID2	MGA	0.878	1
ARID2	Amp_3q26.2	0.878	1
CSMD3	RBM10	0.878	1
ERBB2	NF1	0.878	1
FAM65C	20q-Amp	0.878	1
FAM65C	5q-Del	0.878	1
FCRLA	MAP2	0.878	1
FTSJD1	MGA	0.878	1
MAP2	Amp_1p34.3	0.878	1
MAP2	Amp_4q12	0.878	1
MET	SRPX	0.878	1
MET	WT1	0.878	1
MET	21q-Del	0.878	1
MMP16	Amp_4q12	0.878	1
NLRP5	Amp_12q15	0.878	1
RB1	Del_14q32.33	0.878	1
RB1	Del_Xp22.2	0.878	1
SMARCA4	Amp_11q13.3	0.878	1
SRPX	5q-Del	0.878	1
TGFBR3	20q-Amp	0.878	1
TGFBR3	5q-Del	0.878	1
TTN	Amp_17q23.1	0.878	1
WDR66	5q-Del	0.878	1
WT1	20q-Amp	0.878	1
WT1	5q-Del	0.878	1
20q-Amp	19q-Del	0.878	1
20q-Amp	Del_4q22.1	0.878	1
20q-Amp	Del_13q12.11	0.878	1
18p-Del	Del_11q23.1	0.878	1
22q-Del	Amp_12p12.1	0.878	1
8p-Del	Amp_14q13.3	0.878	1
Amp_6p21.1	Del_5q31.1	0.878	1
Amp_6p21.1	Del_16q24.3	0.878	1
Amp_7p11.2	Del_11q23.1	0.878	1
Amp_18q11.2	Del_Xp22.2	0.878	1
Del_11q25	Del_Xp22.2	0.878	1
APC	NRAS	0.879	1
EMG1	EPHA5	0.879	1
ERBB2	5p-Amp	0.879	1
FCRLA	Amp_5p13.1	0.879	1
G3BP1	Del_16q24.3	0.879	1
GAGE2A	NLRP5	0.879	1
LRP1B	SIP1	0.879	1
NLRP5	RPL5	0.879	1
NLRP5	STRA8	0.879	1
NRAS	Del_3q29	0.879	1
RIT1	Del_5q31.1	0.879	1
RIT1	Del_15q15.1	0.879	1
RPL5	Del_5q31.1	0.879	1
TCEAL5	Amp_7p11.2	0.879	1
1q-Amp	Amp_10p15.1	0.879	1
1q-Amp	Del_13q12.11	0.879	1
9q-Del	Amp_8q24.21	0.879	1
Amp_4q12	Amp_5p13.1	0.879	1
Amp_7p11.2	Del_9p23	0.879	1
ADAMTS19	ZEB1	0.88	1
ARID1A	Del_19q13.33	0.88	1
CACNA1F	Amp_10p15.1	0.88	1
EMG1	PHKA1	0.88	1
EMG1	PPP3CA	0.88	1
EMG1	SLAMF9	0.88	1
EMG1	Del_2q22.1	0.88	1
FCRLA	SIP1	0.88	1
KEAP1	Del_3q29	0.88	1
LRP1B	RBM10	0.88	1
MMP16	Amp_8p11.21	0.88	1
NLGN4X	Amp_8q24.21	0.88	1
NUDT11	PHKA1	0.88	1
NUDT11	PPP3CA	0.88	1
NUDT11	SLAMF9	0.88	1
NUDT11	Del_2q22.1	0.88	1
PAPPA2	Del_11q23.1	0.88	1
PAPPA2	Del_14q32.33	0.88	1
PAPPA2	Del_18q23	0.88	1
PDGFRA	Del_1p13.1	0.88	1
PPP3CA	STK19	0.88	1
PTPRU	9q-Del	0.88	1
SIP1	3q-Del	0.88	1
SIP1	Amp_1p34.3	0.88	1
SLAMF9	Del_22q13.32	0.88	1
STK19	Del_2q22.1	0.88	1
TGFBR3	Amp_14q13.3	0.88	1
ZEB1	Del_1p13.1	0.88	1
22q-Del	Amp_10p15.1	0.88	1
9p-Del	Del_2q22.1	0.88	1
Amp_1q21.3	Amp_12q15	0.88	1
Amp_10p15.1	Del_10p15.3	0.88	1
Amp_17q12	Amp_Xq28	0.88	1
Amp_17q12	Del_9p23	0.88	1
Amp_17q12	Del_21q11.2	0.88	1
CDKN2A	NLRP5	0.881	1
NLRP5	Amp_22q11.22	0.881	1
PRKCG	Del_5q31.1	0.881	1
PRKCG	Del_15q15.1	0.881	1
PRKCG	Del_16q24.3	0.881	1
17q-Amp	Del_5q31.1	0.881	1
Amp_7p11.2	Del_22q13.32	0.881	1
Amp_22q11.22	Del_15q15.1	0.881	1
ABCB1	7q-Amp	0.882	1
ADAMTS19	CXCR7	0.882	1
CDKN2A	PTPRU	0.882	1
CDKN2A	SLC4A3	0.882	1
CDKN2A	TRERF1	0.882	1
CXCR7	Del_1p13.1	0.882	1
GNAS	Del_15q15.1	0.882	1
MET	13q-Del	0.882	1
MMP16	ZEB1	0.882	1
NF1	NLRP5	0.882	1
PIK3CA	9q-Del	0.882	1
PRKCG	SMAD4	0.882	1
PRKCG	15q-Del	0.882	1
PRKCG	Del_11p15.5	0.882	1
PTPRU	20p-Amp	0.882	1
SLC4A3	17q-Amp	0.882	1
SLC4A3	Amp_22q11.22	0.882	1
TRERF1	20p-Amp	0.882	1
1p-Amp	19p-Del	0.882	1
1p-Amp	Del_1p13.1	0.882	1
20p-Amp	Del_11p15.5	0.882	1
ARID2	Del_2q22.1	0.883	1
KCNQ5	Amp_5p15.33	0.883	1
MET	ROBO2	0.883	1
NF1	SETD2	0.883	1
NF1	Del_21q11.2	0.883	1
NUDT11	1q-Amp	0.883	1
ROBO2	20q-Amp	0.883	1
ROBO2	5q-Del	0.883	1
3p-Del	Del_2q22.1	0.883	1
Amp_7q31.2	Del_9p21.3	0.883	1
Del_5q12.1	Del_9p21.3	0.883	1
Del_6q26	Del_9p21.3	0.883	1
ABCB1	Del_Xp22.2	0.884	1
ACVR1B	ZEB1	0.884	1
ATM	FAM65C	0.884	1
ATM	WDR66	0.884	1
ATM	21q-Del	0.884	1
ATM	Del_4q22.1	0.884	1
ERBB2	18p-Del	0.884	1
KCNQ5	PDGFRA	0.884	1
NFE2L2	Amp_10p15.1	0.884	1
PAK1	PDGFRA	0.884	1
PAK1	7q-Amp	0.884	1
PAK1	Del_4q34.3	0.884	1
PDGFRA	Del_12q12	0.884	1
TCEAL5	Amp_10p15.1	0.884	1
U2AF1	Del_11q25	0.884	1
ZNF608	7q-Amp	0.884	1
ZNF608	Del_4q34.3	0.884	1
17q-Amp	Amp_20q13.33	0.884	1
7p-Amp	Amp_22q11.22	0.884	1
7q-Amp	Del_12q12	0.884	1
18q-Del	Amp_7q31.2	0.884	1
22q-Del	Amp_11q13.3	0.884	1
Amp_1p34.3	Del_13q12.11	0.884	1
Amp_1p34.3	Del_17p13.3	0.884	1
Amp_4q12	Del_13q12.11	0.884	1
Amp_13q33.3	Del_10q26.3	0.884	1
Amp_20q13.33	Del_3p21.31	0.884	1
Amp_20q13.33	Del_5q12.1	0.884	1
Del_4q34.3	Del_12q12	0.884	1
ABCB1	EPHA3	0.885	1
BRAF	Del_3q11.1	0.885	1
CTNNB1	Amp_4q12	0.885	1
DNMT3A	NRAS	0.885	1
DNMT3A	3q-Del	0.885	1
EPHA3	MAP2	0.885	1
EPHB1	Amp_1q21.3	0.885	1
GNAS	8p-Del	0.885	1
GNAS	Del_19p13.3	0.885	1
MAP2	Del_19p13.2	0.885	1
MGA	Amp_1p34.3	0.885	1
MGA	Del_3q11.1	0.885	1
NRAS	TTN	0.885	1
NUDT11	Amp_8q24.21	0.885	1
Amp_1p34.3	Del_9q21.11	0.885	1
Amp_3q26.2	Amp_4q12	0.885	1
Amp_5p15.33	Del_9p23	0.885	1
Amp_17q12	Del_19p13.2	0.885	1
Amp_17q23.1	Del_3q11.1	0.885	1
ADAMTS19	APC	0.886	1
ADAMTS19	Del_3q29	0.886	1
APC	Del_1p13.1	0.886	1
CACNA1F	18q-Del	0.886	1
EGFR	Del_13q12.11	0.886	1
NFE2L2	Amp_12q15	0.886	1
NRAS	Del_8p23.2	0.886	1
NUDT11	7p-Amp	0.886	1
PAK1	8p-Del	0.886	1
STIM1	8p-Del	0.886	1
STK19	7p-Amp	0.886	1
TPTE	3p-Del	0.886	1
ARID2	SMARCA4	0.887	1
EPHB1	RB1	0.887	1
FTSJD1	Del_15q11.2	0.887	1
OR2L13	Del_5q12.1	0.887	1
RB1	Amp_7q31.2	0.887	1
SMARCA4	Del_13q34	0.887	1
SRPX	8p-Del	0.887	1
TTN	Amp_10p15.1	0.887	1
TTN	Del_10q26.3	0.887	1
WDR66	8p-Del	0.887	1
WT1	8p-Del	0.887	1
5p-Amp	Del_15q15.1	0.887	1
5p-Amp	Del_16q24.3	0.887	1
18p-Del	Amp_19q12	0.887	1
19q-Del	8p-Del	0.887	1
Amp_7q31.2	Amp_18q11.2	0.887	1
Del_3p21.31	Del_11q25	0.887	1
Del_5q12.1	Del_11q25	0.887	1
ABCB1	EPHA5	0.888	1
APC	TGFBR3	0.888	1
APC	WDR66	0.888	1
APC	WT1	0.888	1
EGFR	Del_15q15.1	0.888	1
FAM65C	SIP1	0.888	1
FTSJD1	3p-Del	0.888	1
GNAS	Del_11q23.1	0.888	1
GNAS	Del_14q32.33	0.888	1
NF1	Del_11q23.1	0.888	1
PDGFRA	Del_19p13.3	0.888	1
ROBO2	Del_16q24.3	0.888	1
SIP1	SRPX	0.888	1
SIP1	TGFBR3	0.888	1
SIP1	WDR66	0.888	1
SIP1	19q-Del	0.888	1
SIP1	21q-Del	0.888	1
SIP1	Del_4q22.1	0.888	1
TRERF1	Del_4q34.3	0.888	1
WDR66	Del_3q29	0.888	1
ZEB1	15q-Del	0.888	1
7q-Amp	15q-Del	0.888	1
19q-Del	Del_3q29	0.888	1
Amp_5p15.33	Amp_Xq28	0.888	1
Amp_5p15.33	Del_3p26.2	0.888	1
Amp_12p12.1	Del_16q23.1	0.888	1
Amp_12q14.1	Del_15q15.1	0.888	1
Amp_17q12	Del_18q21.32	0.888	1
CXCR7	13q-Del	0.889	1
MAP2	Del_8p23.2	0.889	1
MMP16	Del_8p23.2	0.889	1
NLRP5	Del_16q23.1	0.889	1
NLRP6	PIK3CA	0.889	1
NLRP6	13q-Del	0.889	1
PIK3CA	1p-Amp	0.889	1
PIK3CA	Del_12q24.33	0.889	1
PPP3CA	STK11	0.889	1
1p-Amp	13q-Del	0.889	1
1p-Amp	Del_12p13.2	0.889	1
13q-Del	Del_12q24.33	0.889	1
Amp_11q13.3	Del_16q24.3	0.889	1
ARID1A	Del_3p26.2	0.89	1
ARID1A	Del_21q11.2	0.89	1
EMG1	U2AF1	0.89	1
EPHA3	SRPX	0.89	1
EPHA3	WT1	0.89	1
EPHA3	19q-Del	0.89	1
EPHB1	G3BP1	0.89	1
EPHB1	GAGE2A	0.89	1
EPHB1	RPL5	0.89	1
ERBB2	NUDT11	0.89	1
ERBB2	STK19	0.89	1
FAM65C	Del_19p13.2	0.89	1
G3BP1	Amp_19q12	0.89	1
G3BP1	Del_3p21.31	0.89	1
KCNQ5	Del_18q21.32	0.89	1
KCNQ5	Del_19q13.33	0.89	1
NF1	7p-Amp	0.89	1
NUDT11	U2AF1	0.89	1
PAK1	Amp_17q12	0.89	1
PAK1	Del_19q13.33	0.89	1
RIT1	Amp_7q31.2	0.89	1
RPL5	Amp_7q31.2	0.89	1
SMAD4	Amp_5p13.1	0.89	1
STIM1	Amp_17q12	0.89	1
STIM1	Del_18q21.32	0.89	1
STK19	U2AF1	0.89	1
TP53	Amp_11q13.3	0.89	1
TRERF1	Amp_5p13.1	0.89	1
1q-Amp	Amp_11q13.3	0.89	1
18p-Del	Amp_8q24.21	0.89	1
Amp_10p15.1	Amp_18q11.2	0.89	1
Amp_17q12	Del_12q12	0.89	1
Amp_18q11.2	Del_10q26.3	0.89	1
Amp_Xq28	Del_21q11.2	0.89	1
ARID1A	CTNNB1	0.891	1
ARID1A	DNMT3A	0.891	1
CTNNB1	SETD2	0.891	1
CTNNB1	Amp_Xq28	0.891	1
NRAS	PTPRU	0.891	1
NRAS	SLC4A3	0.891	1
NRAS	SMAD4	0.891	1
NRAS	TRERF1	0.891	1
NRAS	15q-Del	0.891	1
NRAS	Del_11p15.5	0.891	1
PHKA1	Del_11q23.1	0.891	1
PHKA1	Del_14q32.33	0.891	1
PPP3CA	Amp_12p12.1	0.891	1
PPP3CA	Del_14q32.33	0.891	1
PPP3CA	Del_Xp22.2	0.891	1
TP53	Amp_10p15.1	0.891	1
TPTE	Amp_12q15	0.891	1
19p-Del	Amp_17q12	0.891	1
Amp_5p15.33	Del_18q23	0.891	1
Amp_12p12.1	Del_2q22.1	0.891	1
Del_2q22.1	Del_11q23.1	0.891	1
Del_2q22.1	Del_Xp22.2	0.891	1
APC	Amp_6p21.1	0.892	1
CACNA1F	5q-Del	0.892	1
DNMT3A	Amp_1q21.3	0.892	1
EGFR	SRPX	0.892	1
EGFR	19q-Del	0.892	1
ERBB2	GNAS	0.892	1
GNAS	Del_18q21.32	0.892	1
LRP1B	SETD2	0.892	1
MGA	7q-Amp	0.892	1
PDGFRA	Del_9q21.11	0.892	1
PIK3CA	ZEB1	0.892	1
PTPRU	9p-Del	0.892	1
RPL5	Amp_7p11.2	0.892	1
SMAD4	9p-Del	0.892	1
TRERF1	9p-Del	0.892	1
TRERF1	Del_22q13.32	0.892	1
WT1	Del_18q21.32	0.892	1
8q-Amp	21q-Del	0.892	1
17p-Del	Amp_1p34.3	0.892	1
17p-Del	Del_3q11.1	0.892	1
19q-Del	Del_18q21.32	0.892	1
21q-Del	Del_18q21.32	0.892	1
Amp_3q26.2	Del_4q34.3	0.892	1
Amp_3q26.2	Del_14q32.33	0.892	1
Amp_3q26.2	Del_Xp22.2	0.892	1
Amp_17q23.1	Del_11q23.1	0.892	1
Del_3q11.1	Del_15q11.2	0.892	1
ATM	8p-Del	0.893	1
MET	Amp_13q33.3	0.893	1
MGA	Amp_8q24.21	0.893	1
NFE2L2	5q-Del	0.893	1
PRKCG	Del_1p36.13	0.893	1
TCEAL5	Amp_1q21.3	0.893	1
TP53	Del_13q12.11	0.893	1
20p-Amp	Del_1p36.13	0.893	1
18p-Del	Amp_12p12.1	0.893	1
5q-Del	Amp_13q33.3	0.893	1
6q-Del	Amp_14q13.3	0.893	1
Amp_3q26.2	Del_19p13.3	0.893	1
Amp_5p13.1	Del_18q21.32	0.893	1
CTNNB1	18q-Del	0.894	1
DNMT3A	Amp_5p15.33	0.894	1
EPHA5	Amp_4q12	0.894	1
KCNQ5	Del_6q26	0.894	1
KCNQ5	Del_18q23	0.894	1
NF1	Del_18q21.32	0.894	1
PAK1	Del_6q26	0.894	1
SMARCA4	Del_9p21.3	0.894	1
STK11	Del_19q13.33	0.894	1
ZNF608	Del_6q26	0.894	1
ZNF608	Del_18q23	0.894	1
17p-Del	Amp_7p11.2	0.894	1
8p-Del	Amp_7p11.2	0.894	1
Amp_7p11.2	Del_15q11.2	0.894	1
APC	PIK3CA	0.895	1
ARID2	NLRP5	0.895	1
ARID2	Del_15q15.1	0.895	1
CACNA1F	CXCR7	0.895	1
CACNA1F	TP53	0.895	1
FCRLA	PTPRU	0.895	1
FCRLA	SLC4A3	0.895	1
FCRLA	SMAD4	0.895	1
FCRLA	Del_11p15.5	0.895	1
FTSJD1	NLRP5	0.895	1
FTSJD1	Del_5q31.1	0.895	1
FTSJD1	Del_15q15.1	0.895	1
G3BP1	Amp_11q13.3	0.895	1
GAGE2A	Del_9p21.3	0.895	1
LRP1B	Amp_12p12.1	0.895	1
NFE2L2	SIP1	0.895	1
NLRP6	22q-Del	0.895	1
NLRP6	Del_10p15.3	0.895	1
PDGFRA	Del_17p13.3	0.895	1
PTPRU	3q-Del	0.895	1
PTPRU	Amp_4q12	0.895	1
PTPRU	Del_3q11.1	0.895	1
RPL5	Del_9p21.3	0.895	1
SIP1	TCEAL5	0.895	1
SIP1	Amp_13q33.3	0.895	1
SLC4A3	Amp_1p34.3	0.895	1
SLC4A3	Del_3q11.1	0.895	1
SMAD4	Amp_4q12	0.895	1
TP53	Del_10p15.3	0.895	1
TRERF1	Amp_1p34.3	0.895	1
TRERF1	Amp_4q12	0.895	1
TRERF1	Del_3q11.1	0.895	1
1p-Amp	22q-Del	0.895	1
15q-Del	Amp_1p34.3	0.895	1
15q-Del	Del_3q11.1	0.895	1
Amp_6p21.1	Amp_12q14.1	0.895	1
Del_3q29	Del_12p13.2	0.895	1
Del_10p15.3	Del_12q24.33	0.895	1
ABCB1	Del_6q14.3	0.896	1
ARID1A	PAK1	0.896	1
ARID1A	STIM1	0.896	1
ARID1A	Del_12q12	0.896	1
CDKN2A	Amp_7q31.2	0.896	1
EMG1	NF1	0.896	1
KCNQ5	Amp_Xq28	0.896	1
KCNQ5	Del_21q11.2	0.896	1
KEAP1	RBM10	0.896	1
KEAP1	Amp_4q12	0.896	1
MAP2	WDR66	0.896	1
MMP16	19q-Del	0.896	1
MMP16	Del_6q14.3	0.896	1
NF1	STK19	0.896	1
PAK1	Amp_Xq28	0.896	1
PDGFRA	Del_22q13.32	0.896	1
PHKA1	18q-Del	0.896	1
PHKA1	6q-Del	0.896	1
PPP3CA	6q-Del	0.896	1
PRKCG	Amp_19q12	0.896	1
PRKCG	Del_5q12.1	0.896	1
SETD2	STIM1	0.896	1
SLAMF9	18q-Del	0.896	1
STIM1	Del_21q11.2	0.896	1
TGFBR3	Del_6q26	0.896	1
WDR66	Del_18q23	0.896	1
ZNF608	Del_3p26.2	0.896	1
ZNF608	Del_21q11.2	0.896	1
17q-Amp	Amp_19q12	0.896	1
5p-Amp	Del_11q23.1	0.896	1
18q-Del	Del_2q22.1	0.896	1
Amp_5p13.1	Amp_8p11.21	0.896	1
Amp_8q24.21	Del_1p13.1	0.896	1
Amp_17q12	Del_18q23	0.896	1
Amp_18q11.2	Del_16q23.1	0.896	1
Del_12q12	Del_21q11.2	0.896	1
APC	Del_13q12.11	0.897	1
ARID1A	EPHA3	0.897	1
ARID1A	Del_19p13.2	0.897	1
EGFR	Amp_8p11.21	0.897	1
EPHA3	SETD2	0.897	1
EPHA3	STK11	0.897	1
NFE2L2	NLGN4X	0.897	1
NLGN4X	TCEAL5	0.897	1
NLGN4X	Amp_13q33.3	0.897	1
NRAS	Del_1p36.13	0.897	1
PAPPA2	SRPX	0.897	1
PAPPA2	WDR66	0.897	1
8p-Del	Del_21q11.2	0.897	1
Amp_13q33.3	Del_13q34	0.897	1
Del_3q29	Del_17p13.3	0.897	1
ABCB1	Amp_10p15.1	0.898	1
ABCB1	Del_10q26.3	0.898	1
ARID1A	Del_9p23	0.898	1
CTNNB1	WDR66	0.898	1
CTNNB1	WT1	0.898	1
CTNNB1	19q-Del	0.898	1
CTNNB1	21q-Del	0.898	1
DNMT3A	21q-Del	0.898	1
DNMT3A	Del_4q22.1	0.898	1
EPHA3	5p-Amp	0.898	1
FCRLA	NLRP5	0.898	1
FCRLA	Del_16q24.3	0.898	1
GNAS	Del_18q23	0.898	1
KRAS	Del_6q26	0.898	1
NLGN4X	NLRP5	0.898	1
NLRP5	Del_13q34	0.898	1
PAPPA2	SMAD4	0.898	1
SIP1	Del_6q14.3	0.898	1
7p-Amp	Del_16q23.1	0.898	1
Amp_1p34.3	Del_5q31.1	0.898	1
Amp_4q12	Del_15q15.1	0.898	1
Amp_5p13.1	Del_12p13.2	0.898	1
Del_3q11.1	Del_15q15.1	0.898	1
Del_3q11.1	Del_16q24.3	0.898	1
ADAMTS19	DNMT3A	0.899	1
APC	Amp_12q14.1	0.899	1
ARID2	ERBB2	0.899	1
ARID2	Del_14q32.33	0.899	1
CTNNB1	19p-Del	0.899	1
CTNNB1	Del_1p13.1	0.899	1
CTNNB1	Del_18q21.32	0.899	1
CXCR7	EMG1	0.899	1
CXCR7	STK19	0.899	1
DNMT3A	8q-Amp	0.899	1
EMG1	NLRP6	0.899	1
EMG1	1p-Amp	0.899	1
EMG1	Del_12q24.33	0.899	1
ERBB2	3p-Del	0.899	1
FTSJD1	Del_11q23.1	0.899	1
GNAS	Amp_7q31.2	0.899	1
GNAS	Amp_10p15.1	0.899	1
GNAS	Amp_19q12	0.899	1
GNAS	Del_10q26.3	0.899	1
NLRP6	NUDT11	0.899	1
NLRP6	STK19	0.899	1
NUDT11	1p-Amp	0.899	1
NUDT11	Del_12q24.33	0.899	1
PHKA1	Del_10q26.3	0.899	1
SLAMF9	Amp_10p15.1	0.899	1
SLAMF9	Del_10q26.3	0.899	1
STK19	1p-Amp	0.899	1
STK19	Del_12q24.33	0.899	1
1q-Amp	Amp_8q24.21	0.899	1
3p-Del	Del_11q23.1	0.899	1
Amp_10p15.1	Del_2q22.1	0.899	1
ATM	Amp_8q24.21	0.9	1
CACNA1F	Amp_7p11.2	0.9	1
CSMD3	Amp_13q33.3	0.9	1
G3BP1	9q-Del	0.9	1
GAGE2A	RBM10	0.9	1
NF1	PRKCG	0.9	1
NF1	Amp_22q11.22	0.9	1
NRAS	Amp_14q13.3	0.9	1
PAPPA2	ROBO2	0.9	1
RBM10	Amp_12p12.1	0.9	1
ROBO2	Amp_1q21.3	0.9	1
STK11	Del_13q12.11	0.9	1
STRA8	9q-Del	0.9	1
TPTE	Del_16q24.3	0.9	1
9q-Del	Amp_12p12.1	0.9	1
Amp_1q21.3	Amp_12q14.1	0.9	1
ADAMTS19	ARID1A	0.901	1
ARID1A	19p-Del	0.901	1
ARID1A	Del_1p13.1	0.901	1
ATM	8q-Amp	0.901	1
ATM	Del_1p13.1	0.901	1
ATM	Del_18q21.32	0.901	1
EPHA5	Del_9q21.11	0.901	1
FAM65C	Del_9p21.3	0.901	1
G3BP1	LRP1B	0.901	1
KCNQ5	Del_8p23.2	0.901	1
LRP1B	STRA8	0.901	1
MET	Del_11q25	0.901	1
OR2L13	20q-Amp	0.901	1
OR2L13	5q-Del	0.901	1
OR2L13	Amp_8p11.21	0.901	1
PAPPA2	Del_12q24.33	0.901	1
PIK3CA	Amp_17q12	0.901	1
ZNF608	Del_13q12.11	0.901	1
ZNF608	Del_17p13.3	0.901	1
7q-Amp	Amp_8q24.21	0.901	1
13q-Del	Amp_17q12	0.901	1
21q-Del	Del_9p21.3	0.901	1
5q-Del	Amp_18q11.2	0.901	1
Amp_17q12	Del_19p13.3	0.901	1
Del_4q22.1	Del_9p21.3	0.901	1
Del_12q12	Del_13q12.11	0.901	1
ACVR1B	ADAMTS19	0.902	1
ADAMTS19	KCNQ5	0.902	1
ADAMTS19	Del_12q12	0.902	1
APC	TCEAL5	0.902	1
CDKN2A	Del_8p23.2	0.902	1
CXCR7	OR2L13	0.902	1
CXCR7	Amp_18q11.2	0.902	1
EPHB1	Amp_6p21.1	0.902	1
KCNQ5	19p-Del	0.902	1
KRAS	Del_15q11.2	0.902	1
MGA	9p-Del	0.902	1
MGA	Del_22q13.32	0.902	1
NLRP6	OR2L13	0.902	1
NLRP6	RB1	0.902	1
NLRP6	18p-Del	0.902	1
NLRP6	Amp_18q11.2	0.902	1
OR2L13	1p-Amp	0.902	1
PAPPA2	Amp_10p15.1	0.902	1
RB1	1p-Amp	0.902	1
RB1	Del_12q24.33	0.902	1
ROBO2	TPTE	0.902	1
STIM1	19p-Del	0.902	1
STIM1	Del_1p13.1	0.902	1
STK11	20p-Amp	0.902	1
TPTE	Del_Xp22.2	0.902	1
ZNF608	19p-Del	0.902	1
ZNF608	Del_1p13.1	0.902	1
18p-Del	Del_12q24.33	0.902	1
Amp_6p21.1	Del_10p15.3	0.902	1
Del_1p13.1	Del_12q12	0.902	1
ARID2	Amp_5p15.33	0.903	1
ATM	Amp_13q33.3	0.903	1
BRAF	WDR66	0.903	1
BRAF	WT1	0.903	1
CDKN2A	NRAS	0.903	1
EGFR	Del_3p26.2	0.903	1
FAM65C	Amp_3q26.2	0.903	1
FAM65C	Amp_17q23.1	0.903	1
MGA	Del_4q22.1	0.903	1
NRAS	PRKCG	0.903	1
NRAS	17q-Amp	0.903	1
NRAS	20p-Amp	0.903	1
PHKA1	SIP1	0.903	1
PPP3CA	SIP1	0.903	1
PRKCG	Del_16q23.1	0.903	1
SETD2	Del_18q21.32	0.903	1
SIP1	Del_2q22.1	0.903	1
SRPX	Del_9q21.11	0.903	1
TGFBR3	Amp_3q26.2	0.903	1
WDR66	Del_9q21.11	0.903	1
WT1	Amp_3q26.2	0.903	1
WT1	Amp_17q23.1	0.903	1
ZEB1	Del_10p15.3	0.903	1
20p-Amp	Amp_11q13.3	0.903	1
7q-Amp	Del_1p36.13	0.903	1
7q-Amp	Del_10p15.3	0.903	1
8q-Amp	Amp_12p12.1	0.903	1
19q-Del	Amp_17q23.1	0.903	1
21q-Del	Amp_3q26.2	0.903	1
21q-Del	Amp_17q23.1	0.903	1
Del_1p36.13	Del_4q34.3	0.903	1
Del_9p21.3	Del_16q23.1	0.903	1
ARID1A	PTPRU	0.904	1
ARID1A	15q-Del	0.904	1
ARID1A	Del_11p15.5	0.904	1
CACNA1F	5p-Amp	0.904	1
CACNA1F	Del_3q29	0.904	1
CTNNB1	Del_18q23	0.904	1
CXCR7	NF1	0.904	1
NF1	NLRP6	0.904	1
NF1	Del_12q24.33	0.904	1
PRKCG	17q-Amp	0.904	1
PRKCG	20p-Amp	0.904	1
PRKCG	Amp_22q11.22	0.904	1
PTPRU	Amp_Xq28	0.904	1
SETD2	SMAD4	0.904	1
SLC4A3	Amp_Xq28	0.904	1
SLC4A3	Del_3p26.2	0.904	1
SMARCA4	Del_19p13.3	0.904	1
TRERF1	Del_3p26.2	0.904	1
5q-Del	Amp_14q13.3	0.904	1
Amp_1p34.3	Amp_20q13.33	0.904	1
Del_11p15.5	Del_21q11.2	0.904	1
ABCB1	Del_3p26.2	0.905	1
ACVR1B	Amp_8p11.21	0.905	1
APC	Del_13q34	0.905	1
ARID1A	MAP2	0.905	1
CSMD3	Del_22q13.32	0.905	1
ERBB2	Amp_5p15.33	0.905	1
KCNQ5	Amp_8p11.21	0.905	1
LRP1B	Amp_20q13.33	0.905	1
MAP2	Del_3p26.2	0.905	1
MGA	Amp_10p15.1	0.905	1
MMP16	Amp_3q26.2	0.905	1
MMP16	Amp_17q23.1	0.905	1
MMP16	Amp_Xq28	0.905	1
NLGN4X	PIK3CA	0.905	1
OR2L13	9q-Del	0.905	1
PAPPA2	Amp_8q24.21	0.905	1
PPP3CA	Amp_7p11.2	0.905	1
TRERF1	TTN	0.905	1
U2AF1	Amp_5p13.1	0.905	1
22q-Del	Amp_20q13.33	0.905	1
Amp_1p34.3	Del_1p36.13	0.905	1
Amp_12p12.1	Del_11p15.5	0.905	1
Amp_14q13.3	Del_6q26	0.905	1
Del_1p36.13	Del_3q11.1	0.905	1
APC	Del_9p23	0.906	1
EPHB1	Del_8p23.2	0.906	1
G3BP1	Del_4q34.3	0.906	1
GAGE2A	ZEB1	0.906	1
KRAS	PAPPA2	0.906	1
KRAS	SIP1	0.906	1
PAPPA2	Amp_18q11.2	0.906	1
RIT1	ZEB1	0.906	1
RIT1	7q-Amp	0.906	1
RIT1	Del_4q34.3	0.906	1
RIT1	Del_6q14.3	0.906	1
RPL5	Del_6q14.3	0.906	1
SIP1	8p-Del	0.906	1
SLAMF9	Amp_6p21.1	0.906	1
SRPX	Del_13q12.11	0.906	1
TCEAL5	Amp_8q24.21	0.906	1
TGFBR3	Del_17p13.3	0.906	1
U2AF1	Del_11q23.1	0.906	1
U2AF1	Del_14q32.33	0.906	1
WDR66	Del_13q12.11	0.906	1
20p-Amp	Amp_8q24.21	0.906	1
19q-Del	Del_13q12.11	0.906	1
Amp_1q21.3	Del_16q23.1	0.906	1
Amp_6p21.1	Del_2q22.1	0.906	1
Amp_6p21.1	Del_6q14.3	0.906	1
Amp_17q23.1	Del_8p23.2	0.906	1
Del_3q29	Del_9p23	0.906	1
APC	TP53	0.907	1
ATM	Del_16q24.3	0.907	1
CTNNB1	PIK3CA	0.907	1
CTNNB1	Del_12p13.2	0.907	1
EPHA5	OR2L13	0.907	1
EPHA5	8q-Amp	0.907	1
EPHA5	Amp_18q11.2	0.907	1
FAM65C	SLC4A3	0.907	1
FTSJD1	Del_22q13.32	0.907	1
LRP1B	7q-Amp	0.907	1
LRP1B	Del_8p23.2	0.907	1
MET	PHKA1	0.907	1
MET	Del_2q22.1	0.907	1
NLRP5	Del_11q23.1	0.907	1
NLRP5	Del_14q32.33	0.907	1
PDGFRA	Amp_5p15.33	0.907	1
PHKA1	20q-Amp	0.907	1
PHKA1	5q-Del	0.907	1
PTPRU	TGFBR3	0.907	1
PTPRU	WT1	0.907	1
PTPRU	19q-Del	0.907	1
PTPRU	21q-Del	0.907	1
SLAMF9	5q-Del	0.907	1
SLC4A3	SRPX	0.907	1
SLC4A3	WDR66	0.907	1
SLC4A3	WT1	0.907	1
SLC4A3	21q-Del	0.907	1
SLC4A3	Del_4q22.1	0.907	1
SMAD4	SRPX	0.907	1
SMAD4	TGFBR3	0.907	1
SMAD4	WT1	0.907	1
SMAD4	Del_4q22.1	0.907	1
SRPX	TRERF1	0.907	1
SRPX	15q-Del	0.907	1
TGFBR3	15q-Del	0.907	1
TP53	Del_15q15.1	0.907	1
TRERF1	Del_4q22.1	0.907	1
WDR66	15q-Del	0.907	1
WT1	Del_11p15.5	0.907	1
5p-Amp	Amp_12q15	0.907	1
5p-Amp	Del_6q26	0.907	1
Amp_5p13.1	Del_6q26	0.907	1
ACVR1B	13q-Del	0.908	1
CSMD3	ZEB1	0.908	1
CTNNB1	Amp_8q24.21	0.908	1
KCNQ5	13q-Del	0.908	1
KCNQ5	Del_12p13.2	0.908	1
PAK1	PIK3CA	0.908	1
PAK1	13q-Del	0.908	1
PAPPA2	Amp_12p12.1	0.908	1
PIK3CA	ZNF608	0.908	1
SMARCA4	19q-Del	0.908	1
SRPX	Del_15q11.2	0.908	1
WDR66	17p-Del	0.908	1
WT1	Del_15q11.2	0.908	1
9p-Del	Amp_17q12	0.908	1
ACVR1B	EMG1	0.909	1
ACVR1B	EPHA5	0.909	1
ACVR1B	NUDT11	0.909	1
ACVR1B	STK19	0.909	1
ARID2	Amp_10p15.1	0.909	1
ARID2	Del_10q26.3	0.909	1
ATM	Del_6q26	0.909	1
ATM	Del_18q23	0.909	1
CDKN2A	RBM10	0.909	1
EMG1	KCNQ5	0.909	1
EMG1	PAK1	0.909	1
EMG1	ZNF608	0.909	1
EMG1	Del_12q12	0.909	1
EPHA5	KCNQ5	0.909	1
FCRLA	NRAS	0.909	1
GNAS	1p-Amp	0.909	1
KCNQ5	NUDT11	0.909	1
KCNQ5	STK19	0.909	1
LRP1B	Del_15q15.1	0.909	1
NRAS	3q-Del	0.909	1
NRAS	Amp_1p34.3	0.909	1
NRAS	Del_3q11.1	0.909	1
NUDT11	PAK1	0.909	1
NUDT11	STIM1	0.909	1
NUDT11	ZNF608	0.909	1
NUDT11	Del_12q12	0.909	1
PAK1	STK19	0.909	1
PRKCG	RBM10	0.909	1
ROBO2	Del_10p15.3	0.909	1
STK11	Del_3p26.2	0.909	1
STK19	ZNF608	0.909	1
STK19	Del_12q12	0.909	1
1q-Amp	Del_9q21.11	0.909	1
3p-Del	Amp_10p15.1	0.909	1
Amp_5p13.1	Del_19q13.33	0.909	1
Amp_12q14.1	Del_10p15.3	0.909	1
CTNNB1	TCEAL5	0.91	1
DNMT3A	TCEAL5	0.91	1
EPHA5	Amp_5p15.33	0.91	1
FTSJD1	Amp_5p13.1	0.91	1
GNAS	20q-Amp	0.91	1
GNAS	5q-Del	0.91	1
NLRP5	7q-Amp	0.91	1
NLRP5	Del_17p13.3	0.91	1
PTPRU	18q-Del	0.91	1
SETD2	Del_18q23	0.91	1
TGFBR3	Amp_8p11.21	0.91	1
WT1	Amp_8p11.21	0.91	1
7q-Amp	Del_15q15.1	0.91	1
15q-Del	6q-Del	0.91	1
Amp_1q21.3	Del_15q15.1	0.91	1
Amp_8p11.21	Del_4q22.1	0.91	1
Amp_8q24.21	Amp_10p15.1	0.91	1
ABCB1	STK11	0.911	1
ABCB1	5q-Del	0.911	1
ARID2	Del_3p21.31	0.911	1
EPHB1	FCRLA	0.911	1
FCRLA	Amp_19q12	0.911	1
G3BP1	Del_19q13.33	0.911	1
GAGE2A	Amp_17q12	0.911	1
MAP2	5q-Del	0.911	1
RIT1	Del_19q13.33	0.911	1
ROBO2	Del_2q22.1	0.911	1
SIP1	Del_6q26	0.911	1
SMAD4	5p-Amp	0.911	1
STRA8	Amp_17q12	0.911	1
STRA8	Del_19q13.33	0.911	1
TPTE	17q-Amp	0.911	1
TPTE	Amp_22q11.22	0.911	1
17p-Del	Amp_17q12	0.911	1
3q-Del	Amp_19q12	0.911	1
3q-Del	Del_5q12.1	0.911	1
Amp_1p34.3	Amp_7q31.2	0.911	1
Amp_4q12	Amp_7q31.2	0.911	1
Amp_4q12	Del_3p21.31	0.911	1
Amp_12p12.1	Del_4q34.3	0.911	1
Amp_12p12.1	Del_6q26	0.911	1
Amp_19q12	Del_3q11.1	0.911	1
ADAMTS19	Del_11p15.5	0.912	1
APC	OR2L13	0.912	1
APC	Amp_18q11.2	0.912	1
LRP1B	NF1	0.912	1
SLC4A3	19p-Del	0.912	1
SLC4A3	Del_1p13.1	0.912	1
SMAD4	Del_1p13.1	0.912	1
TPTE	1p-Amp	0.912	1
TPTE	Del_1p13.1	0.912	1
TRERF1	19p-Del	0.912	1
U2AF1	Amp_12p12.1	0.912	1
17p-Del	Del_10q26.3	0.912	1
19p-Del	Del_11p15.5	0.912	1
9p-Del	Del_15q11.2	0.912	1
Amp_8q24.21	Amp_12p12.1	0.912	1
Amp_8q24.21	Del_18q21.32	0.912	1
Amp_10p15.1	Del_15q11.2	0.912	1
ABCB1	Amp_1q21.3	0.913	1
APC	Del_9p21.3	0.913	1
CACNA1F	KCNQ5	0.913	1
CACNA1F	STIM1	0.913	1
CACNA1F	Del_12q12	0.913	1
GNAS	6q-Del	0.913	1
KCNQ5	1q-Amp	0.913	1
KCNQ5	22q-Del	0.913	1
MGA	Del_3p26.2	0.913	1
NLGN4X	Del_13q12.11	0.913	1
NRAS	5p-Amp	0.913	1
PAK1	Del_10p15.3	0.913	1
PDGFRA	18p-Del	0.913	1
PDGFRA	Amp_18q11.2	0.913	1
RB1	Del_4q34.3	0.913	1
SLC4A3	8p-Del	0.913	1
STIM1	22q-Del	0.913	1
STK19	Del_22q13.32	0.913	1
TRERF1	8p-Del	0.913	1
ZEB1	Amp_18q11.2	0.913	1
ZEB1	Del_11q25	0.913	1
7q-Amp	18p-Del	0.913	1
7q-Amp	Amp_18q11.2	0.913	1
Amp_3q26.2	Amp_Xq28	0.913	1
Amp_6p21.1	Amp_11q13.3	0.913	1
Amp_14q13.3	Del_22q13.32	0.913	1
Amp_17q23.1	Del_21q11.2	0.913	1
Amp_18q11.2	Del_4q34.3	0.913	1
Amp_Xq28	Del_9q21.11	0.913	1
BRAF	Amp_17q23.1	0.914	1
CDKN2A	FCRLA	0.914	1
DNMT3A	Del_13q12.11	0.914	1
EGFR	Del_3p21.31	0.914	1
ERBB2	Del_10q26.3	0.914	1
FAM65C	NLRP5	0.914	1
FAM65C	Del_16q24.3	0.914	1
MAP2	TCEAL5	0.914	1
MAP2	Amp_13q33.3	0.914	1
MMP16	Amp_13q33.3	0.914	1
NLGN4X	ROBO2	0.914	1
NLRP5	Del_4q22.1	0.914	1
PHKA1	Del_8p23.2	0.914	1
PRKCG	Amp_1p34.3	0.914	1
PRKCG	Amp_4q12	0.914	1
SRPX	Del_16q24.3	0.914	1
TCEAL5	8q-Amp	0.914	1
TGFBR3	Del_15q15.1	0.914	1
TGFBR3	Del_16q24.3	0.914	1
WDR66	Del_16q24.3	0.914	1
17q-Amp	Amp_4q12	0.914	1
20p-Amp	Amp_1p34.3	0.914	1
8q-Amp	Del_5q12.1	0.914	1
21q-Del	Del_16q24.3	0.914	1
Amp_1p34.3	Amp_22q11.22	0.914	1
Amp_3q26.2	Del_9q21.11	0.914	1
Amp_6p21.1	Del_11q25	0.914	1
Amp_8p11.21	Del_22q13.32	0.914	1
ABCB1	Del_15q11.2	0.915	1
APC	PPP3CA	0.915	1
APC	SLAMF9	0.915	1
APC	Del_2q22.1	0.915	1
ARID2	CXCR7	0.915	1
ARID2	Del_12q24.33	0.915	1
CACNA1F	CTNNB1	0.915	1
CXCR7	FTSJD1	0.915	1
DNMT3A	Del_10p15.3	0.915	1
EPHA5	FAM65C	0.915	1
FAM65C	NRAS	0.915	1
NRAS	SRPX	0.915	1
NRAS	TGFBR3	0.915	1
NRAS	WDR66	0.915	1
NRAS	19q-Del	0.915	1
NRAS	21q-Del	0.915	1
NRAS	Del_4q22.1	0.915	1
PPP3CA	Del_3q29	0.915	1
5p-Amp	Del_10q26.3	0.915	1
ABCB1	6q-Del	0.916	1
ACVR1B	Amp_20q13.33	0.916	1
ARID1A	G3BP1	0.916	1
ARID1A	GAGE2A	0.916	1
CACNA1F	Del_13q34	0.916	1
CDKN2A	ZEB1	0.916	1
ERBB2	18q-Del	0.916	1
G3BP1	SETD2	0.916	1
G3BP1	Amp_Xq28	0.916	1
G3BP1	Del_3p26.2	0.916	1
G3BP1	Del_21q11.2	0.916	1
KCNQ5	Amp_20q13.33	0.916	1
MGA	Amp_20q13.33	0.916	1
NLGN4X	PHKA1	0.916	1
NLGN4X	Del_2q22.1	0.916	1
PAPPA2	Del_16q23.1	0.916	1
PDGFRA	17q-Amp	0.916	1
PPP3CA	Del_13q34	0.916	1
PRKCG	7q-Amp	0.916	1
PRKCG	Del_4q34.3	0.916	1
RIT1	SETD2	0.916	1
RIT1	Amp_Xq28	0.916	1
RIT1	Del_3p26.2	0.916	1
SIP1	Del_13q12.11	0.916	1
SRPX	Del_1p36.13	0.916	1
STIM1	7p-Amp	0.916	1
STRA8	Amp_Xq28	0.916	1
STRA8	Del_21q11.2	0.916	1
TGFBR3	Del_1p36.13	0.916	1
TPTE	Del_10q26.3	0.916	1
U2AF1	6q-Del	0.916	1
20p-Amp	Del_4q34.3	0.916	1
7p-Amp	Del_12q12	0.916	1
7q-Amp	Amp_22q11.22	0.916	1
Del_2q22.1	Del_13q34	0.916	1
Del_3q11.1	Del_9p23	0.916	1
ARID2	Del_9p23	0.917	1
EGFR	SMAD4	0.917	1
EPHA5	ROBO2	0.917	1
NLRP5	Amp_8p11.21	0.917	1
PAPPA2	Amp_8p11.21	0.917	1
1q-Amp	Del_18q21.32	0.917	1
9q-Del	Amp_19q12	0.917	1
Amp_8p11.21	Del_15q15.1	0.917	1
Amp_11q13.3	Del_3q11.1	0.917	1
APC	EPHA3	0.918	1
EPHA3	Del_3q29	0.918	1
EPHB1	5p-Amp	0.918	1
FCRLA	NF1	0.918	1
MET	Amp_17q23.1	0.918	1
MET	Del_9q21.11	0.918	1
NFE2L2	SMAD4	0.918	1
NFE2L2	TRERF1	0.918	1
NLGN4X	Del_3p21.31	0.918	1
SLC4A3	TCEAL5	0.918	1
TCEAL5	Del_18q23	0.918	1
5p-Amp	Amp_7q31.2	0.918	1
5p-Amp	Amp_19q12	0.918	1
15q-Del	Amp_13q33.3	0.918	1
5q-Del	Amp_17q23.1	0.918	1
Amp_6p21.1	Del_22q13.32	0.918	1
Amp_7q31.2	Del_13q34	0.918	1
Amp_10p15.1	Del_11q23.1	0.918	1
Amp_12p12.1	Del_9q21.11	0.918	1
Amp_13q33.3	Del_11p15.5	0.918	1
ADAMTS19	Del_12p13.2	0.919	1
ARID2	MET	0.919	1
BRAF	NFE2L2	0.919	1
CDKN2A	Amp_7p11.2	0.919	1
CTNNB1	Amp_8p11.21	0.919	1
CXCR7	SIP1	0.919	1
DNMT3A	NLGN4X	0.919	1
EMG1	G3BP1	0.919	1
EMG1	GAGE2A	0.919	1
EMG1	RIT1	0.919	1
EMG1	RPL5	0.919	1
EMG1	STRA8	0.919	1
FAM65C	1q-Amp	0.919	1
FTSJD1	MET	0.919	1
FTSJD1	5q-Del	0.919	1
G3BP1	NUDT11	0.919	1
G3BP1	STK19	0.919	1
GAGE2A	NUDT11	0.919	1
GAGE2A	STK19	0.919	1
KRAS	Amp_8q24.21	0.919	1
MGA	TCEAL5	0.919	1
NLRP5	Del_10q26.3	0.919	1
NLRP6	SIP1	0.919	1
NUDT11	RIT1	0.919	1
NUDT11	RPL5	0.919	1
NUDT11	STRA8	0.919	1
OR2L13	PAK1	0.919	1
OR2L13	STIM1	0.919	1
OR2L13	Amp_20q13.33	0.919	1
OR2L13	Del_12q12	0.919	1
PIK3CA	PTPRU	0.919	1
PIK3CA	TRERF1	0.919	1
PIK3CA	Del_1p13.1	0.919	1
PTPRU	13q-Del	0.919	1
RIT1	STK19	0.919	1
RPL5	STK19	0.919	1
RPL5	8q-Amp	0.919	1
SIP1	1p-Amp	0.919	1
SIP1	Amp_8p11.21	0.919	1
SIP1	Del_12q24.33	0.919	1
STIM1	Del_11q25	0.919	1
STK19	STRA8	0.919	1
STRA8	8q-Amp	0.919	1
TP53	18q-Del	0.919	1
TRERF1	13q-Del	0.919	1
TRERF1	Del_12p13.2	0.919	1
ZEB1	18q-Del	0.919	1
ZNF608	Amp_18q11.2	0.919	1
ZNF608	Del_11q25	0.919	1
7p-Amp	Amp_18q11.2	0.919	1
15q-Del	Del_12p13.2	0.919	1
19p-Del	Del_12p13.2	0.919	1
3p-Del	Amp_1q21.3	0.919	1
5q-Del	Amp_1q21.3	0.919	1
Amp_7p11.2	Amp_22q11.22	0.919	1
ARID1A	22q-Del	0.92	1
CACNA1F	SETD2	0.92	1
EPHA3	Amp_5p13.1	0.92	1
ERBB2	5q-Del	0.92	1
KEAP1	NLRP6	0.92	1
KEAP1	WDR66	0.92	1
KEAP1	Del_4q22.1	0.92	1
KEAP1	Del_12q24.33	0.92	1
KEAP1	Del_18q21.32	0.92	1
LRP1B	Amp_3q26.2	0.92	1
LRP1B	Amp_17q23.1	0.92	1
NFE2L2	NRAS	0.92	1
NRAS	TCEAL5	0.92	1
ROBO2	Del_16q23.1	0.92	1
SETD2	Del_10p15.3	0.92	1
SMAD4	Amp_1q21.3	0.92	1
1p-Amp	Del_19p13.3	0.92	1
1q-Amp	17p-Del	0.92	1
5p-Amp	Amp_20q13.33	0.92	1
22q-Del	Amp_Xq28	0.92	1
9p-Del	Del_Xp22.2	0.92	1
Amp_12q14.1	Del_16q23.1	0.92	1
ACVR1B	Amp_14q13.3	0.921	1
ADAMTS19	G3BP1	0.921	1
ADAMTS19	RIT1	0.921	1
ADAMTS19	RPL5	0.921	1
G3BP1	19p-Del	0.921	1
KCNQ5	Amp_14q13.3	0.921	1
NLRP6	Del_14q32.33	0.921	1
NLRP6	Del_Xp22.2	0.921	1
OR2L13	ROBO2	0.921	1
RIT1	Del_1p13.1	0.921	1
ROBO2	Amp_18q11.2	0.921	1
SLC4A3	Amp_12q15	0.921	1
SMAD4	Amp_12q15	0.921	1
TRERF1	Amp_12q15	0.921	1
TTN	Del_Xp22.2	0.921	1
ZNF608	Amp_14q13.3	0.921	1
15q-Del	Amp_12q15	0.921	1
18p-Del	Amp_12q14.1	0.921	1
18p-Del	Amp_17q12	0.921	1
18p-Del	Del_19q13.33	0.921	1
Amp_5p15.33	Del_18q21.32	0.921	1
Amp_6p21.1	Del_11p15.5	0.921	1
Amp_8q24.21	Amp_17q12	0.921	1
Amp_17q12	Amp_18q11.2	0.921	1
Amp_17q12	Del_11q25	0.921	1
CDKN2A	Del_19q13.33	0.922	1
CTNNB1	PHKA1	0.922	1
CXCR7	TP53	0.922	1
EMG1	6q-Del	0.922	1
EPHB1	Del_Xp22.2	0.922	1
NLRP6	TP53	0.922	1
PAPPA2	SMARCA4	0.922	1
PTPRU	Del_6q26	0.922	1
RIT1	Del_6q26	0.922	1
RPL5	Del_6q26	0.922	1
STK19	6q-Del	0.922	1
STRA8	Del_6q26	0.922	1
STRA8	Del_18q23	0.922	1
Amp_1q21.3	Del_3q11.1	0.922	1
Amp_6p21.1	Amp_20q13.33	0.922	1
Amp_7q31.2	Del_Xp22.2	0.922	1
Amp_8q24.21	Amp_12q14.1	0.922	1
Amp_19q12	Del_11q23.1	0.922	1
Del_3p21.31	Del_11q23.1	0.922	1
ADAMTS19	Amp_17q23.1	0.923	1
ADAMTS19	Del_18q23	0.923	1
ATM	Del_10p15.3	0.923	1
BRAF	Del_15q11.2	0.923	1
CTNNB1	18p-Del	0.923	1
CTNNB1	Del_11q25	0.923	1
DNMT3A	OR2L13	0.923	1
DNMT3A	Del_11q25	0.923	1
GNAS	7q-Amp	0.923	1
GNAS	Del_4q34.3	0.923	1
MAP2	Del_5q31.1	0.923	1
MGA	19p-Del	0.923	1
PAPPA2	Amp_13q33.3	0.923	1
RBM10	Amp_4q12	0.923	1
SETD2	Del_8p23.2	0.923	1
SMARCA4	Del_9q21.11	0.923	1
SRPX	Amp_20q13.33	0.923	1
STK11	Amp_11q13.3	0.923	1
TGFBR3	7p-Amp	0.923	1
TGFBR3	Amp_20q13.33	0.923	1
TTN	Del_18q23	0.923	1
WDR66	7p-Amp	0.923	1
7p-Amp	Del_4q22.1	0.923	1
19p-Del	Amp_17q23.1	0.923	1
3p-Del	Amp_14q13.3	0.923	1
9q-Del	Del_3q11.1	0.923	1
Amp_1q21.3	Del_21q11.2	0.923	1
Amp_5p15.33	Del_13q12.11	0.923	1
Amp_17q23.1	Del_1p13.1	0.923	1
APC	MMP16	0.924	1
CDKN2A	FAM65C	0.924	1
CDKN2A	WDR66	0.924	1
CDKN2A	WT1	0.924	1
EPHA5	Del_16q24.3	0.924	1
FAM65C	PRKCG	0.924	1
FCRLA	3q-Del	0.924	1
FCRLA	Del_3q11.1	0.924	1
FTSJD1	Del_17p13.3	0.924	1
LRP1B	PHKA1	0.924	1
NLRP6	Del_22q13.32	0.924	1
PRKCG	SRPX	0.924	1
PRKCG	21q-Del	0.924	1
PRKCG	Del_4q22.1	0.924	1
ROBO2	1q-Amp	0.924	1
SLC4A3	Amp_5p15.33	0.924	1
SMARCA4	20q-Amp	0.924	1
SMARCA4	Del_9p23	0.924	1
SRPX	17q-Amp	0.924	1
SRPX	20p-Amp	0.924	1
SRPX	Amp_22q11.22	0.924	1
TGFBR3	Amp_22q11.22	0.924	1
TTN	Amp_6p21.1	0.924	1
WDR66	17q-Amp	0.924	1
WT1	20p-Amp	0.924	1
17q-Amp	21q-Del	0.924	1
1p-Amp	Del_22q13.32	0.924	1
20p-Amp	Del_4q22.1	0.924	1
20q-Amp	Del_15q11.2	0.924	1
13q-Del	Amp_14q13.3	0.924	1
3q-Del	Amp_1p34.3	0.924	1
3q-Del	Amp_4q12	0.924	1
Amp_4q12	Del_3q11.1	0.924	1
Amp_8p11.21	Del_13q12.11	0.924	1
Amp_22q11.22	Del_4q22.1	0.924	1
Del_9p23	Del_15q11.2	0.924	1
CDKN2A	9p-Del	0.925	1
EPHA3	SLAMF9	0.925	1
EPHA3	Del_2q22.1	0.925	1
EPHB1	WT1	0.925	1
EPHB1	21q-Del	0.925	1
GNAS	Amp_6p21.1	0.925	1
GNAS	Del_12q12	0.925	1
MGA	5p-Amp	0.925	1
MGA	6q-Del	0.925	1
RBM10	Amp_11q13.3	0.925	1
U2AF1	Amp_6p21.1	0.925	1
WDR66	Amp_7q31.2	0.925	1
WDR66	Del_3p21.31	0.925	1
WDR66	Del_5q12.1	0.925	1
19q-Del	Amp_7q31.2	0.925	1
19q-Del	Amp_19q12	0.925	1
Amp_7q31.2	Del_4q22.1	0.925	1
Amp_18q11.2	Del_9p21.3	0.925	1
Del_2q22.1	Del_19p13.2	0.925	1
CACNA1F	SLC4A3	0.926	1
CACNA1F	TRERF1	0.926	1
EPHB1	PDGFRA	0.926	1
G3BP1	PIK3CA	0.926	1
KEAP1	Amp_17q12	0.926	1
KEAP1	Del_19q13.33	0.926	1
NRAS	PHKA1	0.926	1
NRAS	PPP3CA	0.926	1
NRAS	SLAMF9	0.926	1
NRAS	Del_2q22.1	0.926	1
PAPPA2	Del_1p13.1	0.926	1
PDGFRA	Amp_7q31.2	0.926	1
PDGFRA	Del_3p21.31	0.926	1
PDGFRA	Del_5q12.1	0.926	1
PIK3CA	RPL5	0.926	1
PTPRU	Del_10p15.3	0.926	1
ROBO2	Del_22q13.32	0.926	1
RPL5	13q-Del	0.926	1
RPL5	Del_12p13.2	0.926	1
TCEAL5	Del_1p36.13	0.926	1
8q-Amp	Amp_11q13.3	0.926	1
15q-Del	Del_10p15.3	0.926	1
18p-Del	Del_8p23.2	0.926	1
9p-Del	Amp_12q14.1	0.926	1
Amp_1q21.3	Del_13q12.11	0.926	1
Amp_1q21.3	Del_17p13.3	0.926	1
Amp_10p15.1	Del_10q26.3	0.926	1
Amp_12p12.1	Del_17p13.3	0.926	1
Amp_12q14.1	Del_22q13.32	0.926	1
Amp_18q11.2	Del_8p23.2	0.926	1
Del_3q11.1	Del_8p23.2	0.926	1
ABCB1	NF1	0.927	1
ACVR1B	SIP1	0.927	1
ERBB2	Del_3q29	0.927	1
FCRLA	TPTE	0.927	1
KCNQ5	SIP1	0.927	1
KRAS	8q-Amp	0.927	1
NF1	Amp_8p11.21	0.927	1
NLGN4X	OR2L13	0.927	1
NLGN4X	RB1	0.927	1
NLGN4X	Del_16q23.1	0.927	1
PAK1	SIP1	0.927	1
PIK3CA	13q-Del	0.927	1
PIK3CA	Del_12p13.2	0.927	1
PRKCG	Amp_14q13.3	0.927	1
PTPRU	Amp_12q14.1	0.927	1
ROBO2	SLC4A3	0.927	1
SIP1	STIM1	0.927	1
SIP1	ZNF608	0.927	1
SIP1	Del_12q12	0.927	1
SLAMF9	Amp_1q21.3	0.927	1
STK11	3p-Del	0.927	1
TPTE	3q-Del	0.927	1
TPTE	Amp_1p34.3	0.927	1
1p-Amp	Del_10q26.3	0.927	1
13q-Del	Del_12p13.2	0.927	1
17p-Del	Amp_12p12.1	0.927	1
8p-Del	Amp_12q15	0.927	1
ADAMTS19	22q-Del	0.928	1
ARID1A	CDKN2A	0.928	1
ARID1A	PRKCG	0.928	1
ARID1A	17q-Amp	0.928	1
EMG1	Amp_6p21.1	0.928	1
LRP1B	Amp_14q13.3	0.928	1
NLRP5	Amp_8q24.21	0.928	1
NUDT11	Amp_6p21.1	0.928	1
PRKCG	SETD2	0.928	1
PRKCG	Amp_Xq28	0.928	1
PRKCG	Del_3p26.2	0.928	1
PRKCG	Del_21q11.2	0.928	1
RIT1	Del_13q12.11	0.928	1
STRA8	Del_13q12.11	0.928	1
TGFBR3	TTN	0.928	1
17q-Amp	Amp_Xq28	0.928	1
17q-Amp	Del_21q11.2	0.928	1
20p-Amp	Del_3p26.2	0.928	1
Amp_11q13.3	Del_14q32.33	0.928	1
Del_16q24.3	Del_21q11.2	0.928	1
FCRLA	ZEB1	0.929	1
FCRLA	Del_4q34.3	0.929	1
LRP1B	Amp_17q12	0.929	1
NLRP5	TCEAL5	0.929	1
RB1	Del_3p26.2	0.929	1
SETD2	18p-Del	0.929	1
SLAMF9	SLC4A3	0.929	1
SLAMF9	SMAD4	0.929	1
SLAMF9	Del_11p15.5	0.929	1
SLC4A3	Del_2q22.1	0.929	1
TPTE	Amp_14q13.3	0.929	1
TRERF1	Del_2q22.1	0.929	1
TTN	Del_3p26.2	0.929	1
7q-Amp	Amp_4q12	0.929	1
Amp_3q26.2	Del_3q29	0.929	1
Amp_4q12	Del_4q34.3	0.929	1
Amp_13q33.3	Del_15q15.1	0.929	1
Amp_13q33.3	Del_16q24.3	0.929	1
Del_2q22.1	Del_11p15.5	0.929	1
Del_3q11.1	Del_4q34.3	0.929	1
Del_3q29	Del_9q21.11	0.929	1
ABCB1	PPP3CA	0.93	1
ABCB1	SLAMF9	0.93	1
ADAMTS19	SMARCA4	0.93	1
ARID2	KCNQ5	0.93	1
ARID2	STIM1	0.93	1
CACNA1F	G3BP1	0.93	1
CACNA1F	RIT1	0.93	1
CTNNB1	EPHA3	0.93	1
CTNNB1	Del_19p13.2	0.93	1
FAM65C	Amp_11q13.3	0.93	1
FTSJD1	KCNQ5	0.93	1
MAP2	SLAMF9	0.93	1
MGA	Amp_1q21.3	0.93	1
MMP16	PPP3CA	0.93	1
NLRP5	20q-Amp	0.93	1
RIT1	22q-Del	0.93	1
STIM1	3p-Del	0.93	1
STRA8	Amp_5p15.33	0.93	1
TGFBR3	Del_16q23.1	0.93	1
TRERF1	Del_17p13.3	0.93	1
WDR66	Amp_11q13.3	0.93	1
WDR66	Del_16q23.1	0.93	1
20q-Amp	Del_15q15.1	0.93	1
21q-Del	Del_16q23.1	0.93	1
Amp_5p13.1	Del_11q23.1	0.93	1
Del_1p36.13	Del_12p13.2	0.93	1
Del_9p21.3	Del_12q24.33	0.93	1
BRAF	Del_15q15.1	0.931	1
GAGE2A	Amp_8p11.21	0.931	1
MGA	Amp_5p15.33	0.931	1
MGA	Del_16q24.3	0.931	1
NLGN4X	5p-Amp	0.931	1
NLRP6	Amp_12p12.1	0.931	1
NUDT11	ROBO2	0.931	1
PAK1	PAPPA2	0.931	1
PAPPA2	ZNF608	0.931	1
PAPPA2	Del_12q12	0.931	1
PHKA1	8p-Del	0.931	1
RPL5	Amp_8p11.21	0.931	1
SLAMF9	8p-Del	0.931	1
STRA8	Amp_8p11.21	0.931	1
TP53	Del_18q23	0.931	1
1p-Amp	Amp_12p12.1	0.931	1
8p-Del	Del_2q22.1	0.931	1
Amp_3q26.2	Del_16q24.3	0.931	1
Amp_12p12.1	Del_14q32.33	0.931	1
Amp_22q11.22	Del_9p21.3	0.931	1
EPHA5	Del_13q12.11	0.932	1
ERBB2	NRAS	0.932	1
KRAS	Del_14q32.33	0.932	1
NFE2L2	5p-Amp	0.932	1
NLGN4X	PTPRU	0.932	1
NLGN4X	SLC4A3	0.932	1
NLGN4X	TRERF1	0.932	1
NRAS	U2AF1	0.932	1
OR2L13	SMAD4	0.932	1
OR2L13	TRERF1	0.932	1
OR2L13	15q-Del	0.932	1
PDGFRA	3p-Del	0.932	1
PTPRU	RB1	0.932	1
SLC4A3	Amp_18q11.2	0.932	1
SMAD4	18p-Del	0.932	1
SMAD4	Amp_18q11.2	0.932	1
TPTE	Amp_12p12.1	0.932	1
TRERF1	Amp_18q11.2	0.932	1
7q-Amp	3p-Del	0.932	1
15q-Del	Del_13q34	0.932	1
9p-Del	Del_10q26.3	0.932	1
Amp_1q21.3	Amp_5p15.33	0.932	1
Amp_7p11.2	Del_17p13.3	0.932	1
Amp_7q31.2	Del_13q12.11	0.932	1
Amp_10p15.1	Del_3p21.31	0.932	1
Amp_10p15.1	Del_5q12.1	0.932	1
Amp_12p12.1	Amp_Xq28	0.932	1
Amp_12p12.1	Del_21q11.2	0.932	1
Amp_18q11.2	Del_11p15.5	0.932	1
Amp_19q12	Del_10q26.3	0.932	1
BRAF	Del_12p13.2	0.933	1
CTNNB1	ERBB2	0.933	1
CTNNB1	7p-Amp	0.933	1
FAM65C	Amp_1p34.3	0.933	1
FCRLA	SRPX	0.933	1
KEAP1	OR2L13	0.933	1
KEAP1	Del_5q12.1	0.933	1
LRP1B	SRPX	0.933	1
LRP1B	WDR66	0.933	1
NF1	SIP1	0.933	1
TGFBR3	3q-Del	0.933	1
TGFBR3	Amp_4q12	0.933	1
TP53	Amp_18q11.2	0.933	1
TPTE	ZNF608	0.933	1
WDR66	3q-Del	0.933	1
WDR66	Amp_4q12	0.933	1
WDR66	Del_3q11.1	0.933	1
WT1	Amp_1p34.3	0.933	1
WT1	Del_3q11.1	0.933	1
20q-Amp	Del_12q24.33	0.933	1
7q-Amp	Del_16q23.1	0.933	1
13q-Del	Amp_3q26.2	0.933	1
19q-Del	Amp_1p34.3	0.933	1
19q-Del	Amp_4q12	0.933	1
19q-Del	Del_3q11.1	0.933	1
5q-Del	Del_12q24.33	0.933	1
Amp_1p34.3	Del_4q22.1	0.933	1
Amp_4q12	Del_4q22.1	0.933	1
Amp_6p21.1	Amp_12p12.1	0.933	1
Amp_12q15	Del_18q21.32	0.933	1
Del_3q11.1	Del_4q22.1	0.933	1
Del_9p23	Del_Xp22.2	0.933	1
ADAMTS19	PRKCG	0.934	1
CDKN2A	NFE2L2	0.934	1
CDKN2A	TCEAL5	0.934	1
CDKN2A	Amp_13q33.3	0.934	1
EMG1	Del_8p23.2	0.934	1
EPHA5	FTSJD1	0.934	1
EPHA5	G3BP1	0.934	1
EPHA5	STRA8	0.934	1
FCRLA	Del_19q13.33	0.934	1
MGA	PHKA1	0.934	1
MGA	SLAMF9	0.934	1
PHKA1	Amp_14q13.3	0.934	1
PPP3CA	Amp_3q26.2	0.934	1
PRKCG	Amp_13q33.3	0.934	1
PTPRU	Amp_8p11.21	0.934	1
SLAMF9	Amp_3q26.2	0.934	1
STK19	Del_8p23.2	0.934	1
STRA8	Del_8p23.2	0.934	1
TP53	Amp_17q12	0.934	1
TRERF1	Amp_8p11.21	0.934	1
17q-Amp	Del_1p13.1	0.934	1
20p-Amp	Amp_12p12.1	0.934	1
20p-Amp	Amp_13q33.3	0.934	1
8q-Amp	Del_2q22.1	0.934	1
8q-Amp	Del_9q21.11	0.934	1
15q-Del	Amp_8p11.21	0.934	1
18q-Del	Del_15q11.2	0.934	1
Amp_1p34.3	Del_19q13.33	0.934	1
Amp_3q26.2	Del_2q22.1	0.934	1
Amp_7q31.2	Del_19q13.33	0.934	1
Amp_12p12.1	Del_6q14.3	0.934	1
Amp_12q15	Del_1p36.13	0.934	1
Amp_22q11.22	Del_1p13.1	0.934	1
Del_2q22.1	Del_18q21.32	0.934	1
ABCB1	CTNNB1	0.935	1
ACVR1B	Del_14q32.33	0.935	1
APC	Del_Xp22.2	0.935	1
CSMD3	NRAS	0.935	1
G3BP1	SIP1	0.935	1
G3BP1	Del_11q25	0.935	1
GAGE2A	Amp_18q11.2	0.935	1
KCNQ5	Del_14q32.33	0.935	1
KRAS	Amp_17q23.1	0.935	1
NF1	21q-Del	0.935	1
NF1	Amp_18q11.2	0.935	1
NLRP6	18q-Del	0.935	1
OR2L13	RIT1	0.935	1
PIK3CA	Del_10p15.3	0.935	1
RB1	RIT1	0.935	1
RB1	STRA8	0.935	1
RBM10	TGFBR3	0.935	1
RBM10	WT1	0.935	1
RIT1	SIP1	0.935	1
RPL5	SIP1	0.935	1
RPL5	Amp_18q11.2	0.935	1
SIP1	STRA8	0.935	1
STIM1	Del_11q23.1	0.935	1
STRA8	18p-Del	0.935	1
STRA8	Amp_18q11.2	0.935	1
STRA8	Del_11q25	0.935	1
ZNF608	Del_11q23.1	0.935	1
ZNF608	Del_Xp22.2	0.935	1
1p-Amp	6q-Del	0.935	1
17p-Del	Del_3q29	0.935	1
22q-Del	Amp_8q24.21	0.935	1
Amp_1p34.3	Del_19p13.3	0.935	1
Del_9p23	Del_15q15.1	0.935	1
Del_12p13.2	Del_19p13.3	0.935	1
ADAMTS19	RB1	0.936	1
ADAMTS19	18p-Del	0.936	1
ADAMTS19	Amp_18q11.2	0.936	1
ATM	EMG1	0.936	1
ATM	EPHA5	0.936	1
ATM	PTPRU	0.936	1
ATM	SLC4A3	0.936	1
ATM	Del_11p15.5	0.936	1
GAGE2A	1q-Amp	0.936	1
PAK1	Amp_1q21.3	0.936	1
PPP3CA	Amp_8q24.21	0.936	1
PPP3CA	Del_1p36.13	0.936	1
RB1	19p-Del	0.936	1
RPL5	1q-Amp	0.936	1
SLAMF9	Del_1p36.13	0.936	1
WDR66	Del_9p23	0.936	1
ZNF608	Amp_1q21.3	0.936	1
1q-Amp	Amp_13q33.3	0.936	1
7p-Amp	Del_15q15.1	0.936	1
7p-Amp	Del_16q24.3	0.936	1
7p-Amp	Del_22q13.32	0.936	1
18p-Del	Del_1p13.1	0.936	1
18q-Del	Del_14q32.33	0.936	1
18q-Del	Del_Xp22.2	0.936	1
19p-Del	Amp_18q11.2	0.936	1
21q-Del	Del_9p23	0.936	1
9p-Del	Amp_20q13.33	0.936	1
Amp_5p13.1	Amp_18q11.2	0.936	1
Amp_5p13.1	Del_6q14.3	0.936	1
Amp_12p12.1	Del_15q15.1	0.936	1
Amp_20q13.33	Del_5q31.1	0.936	1
Del_1p36.13	Del_2q22.1	0.936	1
ADAMTS19	NLRP5	0.937	1
ADAMTS19	Del_16q24.3	0.937	1
ARID2	DNMT3A	0.937	1
CTNNB1	FTSJD1	0.937	1
CXCR7	Amp_5p13.1	0.937	1
EGFR	9q-Del	0.937	1
GNAS	Del_3p26.2	0.937	1
GNAS	Del_13q34	0.937	1
PAPPA2	5p-Amp	0.937	1
SIP1	TPTE	0.937	1
SMARCA4	5p-Amp	0.937	1
7q-Amp	Del_9p21.3	0.937	1
Amp_1p34.3	Amp_7p11.2	0.937	1
Amp_4q12	Amp_5p15.33	0.937	1
Amp_4q12	Amp_7p11.2	0.937	1
Del_13q12.11	Del_Xp22.2	0.937	1
Del_17p13.3	Del_Xp22.2	0.937	1
ABCB1	ROBO2	0.938	1
ADAMTS19	Del_8p23.2	0.938	1
ARID2	PAPPA2	0.938	1
CDKN2A	18q-Del	0.938	1
CXCR7	NRAS	0.938	1
EPHA3	OR2L13	0.938	1
EPHA5	SLC4A3	0.938	1
EPHA5	15q-Del	0.938	1
EPHB1	Amp_13q33.3	0.938	1
KCNQ5	5p-Amp	0.938	1
LRP1B	SMARCA4	0.938	1
LRP1B	Del_15q11.2	0.938	1
MAP2	ROBO2	0.938	1
NLRP5	Del_15q11.2	0.938	1
NLRP6	NRAS	0.938	1
NRAS	1p-Amp	0.938	1
NRAS	Amp_7p11.2	0.938	1
NRAS	Del_12q24.33	0.938	1
PPP3CA	17p-Del	0.938	1
SIP1	Amp_1q21.3	0.938	1
SLAMF9	SMARCA4	0.938	1
SLAMF9	Del_15q11.2	0.938	1
STIM1	5p-Amp	0.938	1
TCEAL5	Amp_19q12	0.938	1
18q-Del	Amp_Xq28	0.938	1
18q-Del	Del_21q11.2	0.938	1
Amp_7q31.2	Amp_13q33.3	0.938	1
Amp_8p11.21	Del_5q12.1	0.938	1
Amp_13q33.3	Del_3p21.31	0.938	1
Amp_13q33.3	Del_5q12.1	0.938	1
Amp_18q11.2	Del_19p13.2	0.938	1
Del_10q26.3	Del_16q23.1	0.938	1
ARID1A	3q-Del	0.939	1
EPHA3	NUDT11	0.939	1
EPHB1	MAP2	0.939	1
FCRLA	Del_3p26.2	0.939	1
GNAS	RPL5	0.939	1
GNAS	SLC4A3	0.939	1
GNAS	SMAD4	0.939	1
GNAS	TRERF1	0.939	1
KEAP1	Amp_Xq28	0.939	1
KEAP1	Del_21q11.2	0.939	1
KRAS	3q-Del	0.939	1
KRAS	Del_3q11.1	0.939	1
OR2L13	Amp_1q21.3	0.939	1
PAPPA2	Amp_22q11.22	0.939	1
SETD2	Del_3q11.1	0.939	1
STK11	Del_12q24.33	0.939	1
TP53	20p-Amp	0.939	1
17q-Amp	Amp_5p13.1	0.939	1
20q-Amp	Del_19p13.3	0.939	1
3q-Del	Del_21q11.2	0.939	1
Amp_1p34.3	Del_22q13.32	0.939	1
Amp_4q12	Amp_Xq28	0.939	1
Amp_4q12	Del_3p26.2	0.939	1
Amp_6p21.1	Del_6q26	0.939	1
Amp_12q14.1	Del_1p36.13	0.939	1
Amp_12q15	Del_18q23	0.939	1
Amp_14q13.3	Del_11q23.1	0.939	1
Del_3q11.1	Del_21q11.2	0.939	1
Del_12p13.2	Del_15q11.2	0.939	1
BRAF	CTNNB1	0.94	1
CSMD3	Amp_7q31.2	0.94	1
DNMT3A	Amp_3q26.2	0.94	1
EPHA3	Amp_11q13.3	0.94	1
KCNQ5	Del_10q26.3	0.94	1
LRP1B	Del_12p13.2	0.94	1
PAK1	Del_10q26.3	0.94	1
PDGFRA	WDR66	0.94	1
PIK3CA	20p-Amp	0.94	1
PRKCG	Del_12p13.2	0.94	1
PTPRU	U2AF1	0.94	1
RBM10	ZEB1	0.94	1
ROBO2	Amp_12p12.1	0.94	1
TGFBR3	ZEB1	0.94	1
TRERF1	U2AF1	0.94	1
TTN	Del_18q21.32	0.94	1
U2AF1	Del_8p23.2	0.94	1
WDR66	7q-Amp	0.94	1
WT1	ZEB1	0.94	1
ZNF608	Del_10q26.3	0.94	1
17q-Amp	13q-Del	0.94	1
17q-Amp	Del_12p13.2	0.94	1
7q-Amp	Del_4q22.1	0.94	1
13q-Del	Amp_22q11.22	0.94	1
6q-Del	Amp_6p21.1	0.94	1
9q-Del	Del_4q34.3	0.94	1
Amp_7q31.2	Amp_14q13.3	0.94	1
Amp_14q13.3	Amp_19q12	0.94	1
Amp_17q23.1	Del_18q23	0.94	1
APC	TPTE	0.941	1
CSMD3	FAM65C	0.941	1
CSMD3	17q-Amp	0.941	1
CSMD3	Amp_22q11.22	0.941	1
EPHA3	PTPRU	0.941	1
EPHA3	SLC4A3	0.941	1
FAM65C	TGFBR3	0.941	1
FAM65C	19q-Del	0.941	1
LRP1B	PRKCG	0.941	1
LRP1B	17q-Amp	0.941	1
MGA	Del_10p15.3	0.941	1
NLGN4X	Amp_5p13.1	0.941	1
NLRP6	Amp_6p21.1	0.941	1
PHKA1	TTN	0.941	1
RBM10	TPTE	0.941	1
SLC4A3	Del_19p13.2	0.941	1
SRPX	TGFBR3	0.941	1
SRPX	WDR66	0.941	1
SRPX	21q-Del	0.941	1
SRPX	Del_4q22.1	0.941	1
TCEAL5	3q-Del	0.941	1
TCEAL5	Del_3q11.1	0.941	1
TGFBR3	WT1	0.941	1
TGFBR3	21q-Del	0.941	1
TRERF1	Del_19p13.2	0.941	1
TTN	Del_5q12.1	0.941	1
U2AF1	Del_6q14.3	0.941	1
WDR66	19q-Del	0.941	1
WDR66	21q-Del	0.941	1
WT1	19q-Del	0.941	1
WT1	21q-Del	0.941	1
WT1	Del_4q22.1	0.941	1
8q-Amp	Del_10p15.3	0.941	1
22q-Del	Amp_17q23.1	0.941	1
3q-Del	Amp_13q33.3	0.941	1
9q-Del	Del_18q23	0.941	1
Amp_3q26.2	Del_10p15.3	0.941	1
Amp_6p21.1	Del_12q24.33	0.941	1
Amp_12q15	Del_12q24.33	0.941	1
Amp_13q33.3	Del_3q11.1	0.941	1
Del_10p15.3	Del_18q21.32	0.941	1
ADAMTS19	Amp_5p13.1	0.942	1
ARID1A	Del_3p21.31	0.942	1
ATM	GNAS	0.942	1
ATM	Del_22q13.32	0.942	1
CSMD3	SMAD4	0.942	1
CSMD3	Del_11p15.5	0.942	1
CXCR7	Amp_5p15.33	0.942	1
FTSJD1	7p-Amp	0.942	1
KCNQ5	Del_22q13.32	0.942	1
MAP2	STK19	0.942	1
MMP16	Del_17p13.3	0.942	1
NFE2L2	Amp_11q13.3	0.942	1
NLRP5	PPP3CA	0.942	1
OR2L13	Del_1p36.13	0.942	1
PHKA1	Del_15q15.1	0.942	1
PPP3CA	Del_5q31.1	0.942	1
SLAMF9	Del_15q15.1	0.942	1
SLC4A3	1q-Amp	0.942	1
SMAD4	1q-Amp	0.942	1
STIM1	Del_22q13.32	0.942	1
STK11	TGFBR3	0.942	1
TGFBR3	TPTE	0.942	1
TPTE	WDR66	0.942	1
8q-Amp	Amp_12q14.1	0.942	1
18q-Del	Del_15q15.1	0.942	1
8p-Del	Amp_8p11.21	0.942	1
Amp_5p15.33	Del_12q24.33	0.942	1
Amp_7q31.2	Del_3p26.2	0.942	1
Amp_7q31.2	Del_21q11.2	0.942	1
Amp_18q11.2	Del_1p36.13	0.942	1
Amp_Xq28	Del_3p21.31	0.942	1
Del_1p36.13	Del_11q25	0.942	1
APC	CSMD3	0.943	1
CDKN2A	PHKA1	0.943	1
CDKN2A	PPP3CA	0.943	1
CTNNB1	Del_Xp22.2	0.943	1
DNMT3A	Del_11q23.1	0.943	1
DNMT3A	Del_14q32.33	0.943	1
EPHA5	Del_3p21.31	0.943	1
FTSJD1	Amp_7p11.2	0.943	1
LRP1B	Del_14q32.33	0.943	1
OR2L13	PIK3CA	0.943	1
OR2L13	13q-Del	0.943	1
PHKA1	Del_13q12.11	0.943	1
PHKA1	Del_17p13.3	0.943	1
PIK3CA	RB1	0.943	1
PIK3CA	18p-Del	0.943	1
PPP3CA	17q-Amp	0.943	1
PRKCG	SLAMF9	0.943	1
PRKCG	Del_2q22.1	0.943	1
RB1	13q-Del	0.943	1
SIP1	Amp_8q24.21	0.943	1
SLAMF9	17q-Amp	0.943	1
SLAMF9	Amp_22q11.22	0.943	1
9q-Del	Amp_10p15.1	0.943	1
9q-Del	Del_10q26.3	0.943	1
Amp_14q13.3	Del_6q14.3	0.943	1
Amp_22q11.22	Del_2q22.1	0.943	1
ABCB1	OR2L13	0.944	1
ACVR1B	NRAS	0.944	1
ARID2	RIT1	0.944	1
ARID2	STRA8	0.944	1
ARID2	TP53	0.944	1
CTNNB1	CXCR7	0.944	1
CTNNB1	NLRP6	0.944	1
CXCR7	DNMT3A	0.944	1
DNMT3A	Del_12q24.33	0.944	1
FTSJD1	RIT1	0.944	1
FTSJD1	RPL5	0.944	1
G3BP1	3p-Del	0.944	1
KCNQ5	NRAS	0.944	1
MAP2	OR2L13	0.944	1
MAP2	Amp_18q11.2	0.944	1
MMP16	U2AF1	0.944	1
NRAS	PAK1	0.944	1
NRAS	ZNF608	0.944	1
NRAS	Del_6q14.3	0.944	1
NRAS	Del_12q12	0.944	1
PDGFRA	Del_13q34	0.944	1
SIP1	TTN	0.944	1
SIP1	Del_22q13.32	0.944	1
STRA8	3p-Del	0.944	1
TP53	3p-Del	0.944	1
TPTE	18p-Del	0.944	1
8p-Del	Amp_22q11.22	0.944	1
Amp_1p34.3	Del_1p13.1	0.944	1
Amp_1q21.3	Del_15q11.2	0.944	1
ABCB1	SLC4A3	0.945	1
ABCB1	SMAD4	0.945	1
ABCB1	TRERF1	0.945	1
ABCB1	Del_11p15.5	0.945	1
ARID1A	ARID2	0.945	1
ARID2	SLC4A3	0.945	1
ARID2	SMAD4	0.945	1
BRAF	ROBO2	0.945	1
BRAF	STK19	0.945	1
CSMD3	Amp_10p15.1	0.945	1
CXCR7	ROBO2	0.945	1
EPHA5	5p-Amp	0.945	1
FTSJD1	PTPRU	0.945	1
FTSJD1	SMAD4	0.945	1
KCNQ5	20q-Amp	0.945	1
KCNQ5	5q-Del	0.945	1
MAP2	SMAD4	0.945	1
MET	Del_12q12	0.945	1
MGA	NUDT11	0.945	1
MGA	STK19	0.945	1
MGA	Amp_7q31.2	0.945	1
MGA	Amp_12q14.1	0.945	1
MMP16	PTPRU	0.945	1
MMP16	TRERF1	0.945	1
MMP16	Del_11p15.5	0.945	1
MMP16	Del_13q34	0.945	1
NLRP6	Amp_12q14.1	0.945	1
PAK1	20q-Amp	0.945	1
PRKCG	Del_10p15.3	0.945	1
RBM10	TTN	0.945	1
ROBO2	1p-Amp	0.945	1
ROBO2	Amp_17q23.1	0.945	1
STK19	Amp_3q26.2	0.945	1
TGFBR3	Amp_17q12	0.945	1
TGFBR3	Del_19q13.33	0.945	1
TRERF1	Amp_20q13.33	0.945	1
ZNF608	20q-Amp	0.945	1
20p-Amp	Del_10p15.3	0.945	1
22q-Del	Del_18q23	0.945	1
Amp_6p21.1	Del_9p21.3	0.945	1
Amp_6p21.1	Del_14q32.33	0.945	1
Amp_12q14.1	Amp_17q23.1	0.945	1
Amp_12q15	Del_14q32.33	0.945	1
BRAF	TP53	0.946	1
BRAF	Amp_5p13.1	0.946	1
CSMD3	KEAP1	0.946	1
KEAP1	NLGN4X	0.946	1
LRP1B	Amp_7q31.2	0.946	1
MMP16	Amp_11q13.3	0.946	1
PPP3CA	Amp_8p11.21	0.946	1
STK19	Amp_14q13.3	0.946	1
WDR66	Amp_1q21.3	0.946	1
7p-Amp	Del_13q12.11	0.946	1
7p-Amp	Del_17p13.3	0.946	1
18q-Del	Amp_14q13.3	0.946	1
3q-Del	Amp_14q13.3	0.946	1
6q-Del	Del_1p13.1	0.946	1
Amp_6p21.1	Del_15q11.2	0.946	1
Amp_8p11.21	Del_2q22.1	0.946	1
Amp_10p15.1	Del_9p23	0.946	1
EMG1	SMARCA4	0.947	1
MGA	TPTE	0.947	1
SRPX	Del_8p23.2	0.947	1
TPTE	Amp_17q23.1	0.947	1
17p-Del	Del_10p15.3	0.947	1
18p-Del	8p-Del	0.947	1
19q-Del	Del_8p23.2	0.947	1
9q-Del	Amp_13q33.3	0.947	1
Amp_5p13.1	Amp_10p15.1	0.947	1
Amp_5p13.1	Del_10q26.3	0.947	1
Amp_12p12.1	Del_3q11.1	0.947	1
Amp_12p12.1	Del_13q34	0.947	1
BRAF	U2AF1	0.948	1
FAM65C	NFE2L2	0.948	1
FAM65C	Amp_13q33.3	0.948	1
G3BP1	Amp_14q13.3	0.948	1
G3BP1	Del_14q32.33	0.948	1
G3BP1	Del_Xp22.2	0.948	1
GAGE2A	Del_Xp22.2	0.948	1
NF1	Amp_17q12	0.948	1
NFE2L2	21q-Del	0.948	1
NLGN4X	Del_12q24.33	0.948	1
RIT1	Del_Xp22.2	0.948	1
RPL5	Del_Xp22.2	0.948	1
STRA8	Amp_14q13.3	0.948	1
STRA8	Del_11q23.1	0.948	1
STRA8	Del_14q32.33	0.948	1
TGFBR3	Amp_13q33.3	0.948	1
U2AF1	8p-Del	0.948	1
WDR66	Amp_13q33.3	0.948	1
WT1	Amp_13q33.3	0.948	1
7q-Amp	Del_8p23.2	0.948	1
13q-Del	Amp_8p11.21	0.948	1
9p-Del	Amp_11q13.3	0.948	1
Amp_5p13.1	Del_18q23	0.948	1
Amp_10p15.1	Del_13q12.11	0.948	1
Amp_11q13.3	Amp_Xq28	0.948	1
Del_6q14.3	Del_21q11.2	0.948	1
Del_15q11.2	Del_18q23	0.948	1
ADAMTS19	EPHB1	0.949	1
ADAMTS19	Amp_7q31.2	0.949	1
APC	MET	0.949	1
APC	20q-Amp	0.949	1
ARID1A	FAM65C	0.949	1
ARID1A	WDR66	0.949	1
BRAF	18p-Del	0.949	1
CSMD3	Amp_8p11.21	0.949	1
CXCR7	Amp_7p11.2	0.949	1
DNMT3A	Del_10q26.3	0.949	1
EMG1	NUDT11	0.949	1
EMG1	STK19	0.949	1
EPHA5	Del_2q22.1	0.949	1
FAM65C	SETD2	0.949	1
FCRLA	PHKA1	0.949	1
FCRLA	PPP3CA	0.949	1
KEAP1	Del_9p21.3	0.949	1
MGA	OR2L13	0.949	1
MGA	RB1	0.949	1
MGA	18p-Del	0.949	1
NUDT11	STK19	0.949	1
OR2L13	22q-Del	0.949	1
OR2L13	Amp_17q23.1	0.949	1
OR2L13	Del_10p15.3	0.949	1
PHKA1	3q-Del	0.949	1
PHKA1	Amp_1p34.3	0.949	1
PHKA1	Amp_4q12	0.949	1
PPP3CA	Amp_1p34.3	0.949	1
PPP3CA	Amp_4q12	0.949	1
ROBO2	TP53	0.949	1
SETD2	WT1	0.949	1
SLAMF9	3q-Del	0.949	1
TGFBR3	Del_19p13.3	0.949	1
TGFBR3	Del_21q11.2	0.949	1
TTN	Amp_17q12	0.949	1
WDR66	Del_21q11.2	0.949	1
WT1	Del_3p26.2	0.949	1
ZEB1	Del_10q26.3	0.949	1
7q-Amp	Amp_10p15.1	0.949	1
13q-Del	3q-Del	0.949	1
18p-Del	Del_10p15.3	0.949	1
19p-Del	Amp_19q12	0.949	1
19q-Del	Del_3p26.2	0.949	1
3q-Del	Del_2q22.1	0.949	1
3q-Del	Del_12p13.2	0.949	1
Amp_3q26.2	Del_13q12.11	0.949	1
Amp_4q12	Del_6q14.3	0.949	1
Amp_4q12	Del_12p13.2	0.949	1
Del_2q22.1	Del_3q11.1	0.949	1
Del_3q11.1	Del_6q14.3	0.949	1
Del_10p15.3	Del_11q25	0.949	1
Del_10p15.3	Del_22q13.32	0.949	1
ACVR1B	APC	0.95	1
ADAMTS19	ARID2	0.95	1
ADAMTS19	FTSJD1	0.95	1
APC	STIM1	0.95	1
ARID2	19p-Del	0.95	1
ATM	MMP16	0.95	1
CDKN2A	18p-Del	0.95	1
CXCR7	SMAD4	0.95	1
CXCR7	TRERF1	0.95	1
CXCR7	Del_11p15.5	0.95	1
EMG1	Del_16q24.3	0.95	1
EPHB1	PHKA1	0.95	1
GAGE2A	TP53	0.95	1
KCNQ5	Del_3q29	0.95	1
LRP1B	STK19	0.95	1
MGA	SLC4A3	0.95	1
MGA	15q-Del	0.95	1
NLRP5	STK19	0.95	1
NLRP6	PTPRU	0.95	1
NLRP6	TRERF1	0.95	1
NLRP6	15q-Del	0.95	1
NRAS	8q-Amp	0.95	1
NRAS	Del_18q21.32	0.95	1
OR2L13	Amp_22q11.22	0.95	1
PAPPA2	Del_17p13.3	0.95	1
PHKA1	Amp_7q31.2	0.95	1
PHKA1	Amp_19q12	0.95	1
PTPRU	Del_9q21.11	0.95	1
PTPRU	Del_12q24.33	0.95	1
RB1	Amp_22q11.22	0.95	1
RIT1	TP53	0.95	1
ROBO2	17q-Amp	0.95	1
ROBO2	Amp_22q11.22	0.95	1
ROBO2	Del_Xp22.2	0.95	1
SIP1	6q-Del	0.95	1
SLAMF9	Del_5q12.1	0.95	1
SLC4A3	Amp_3q26.2	0.95	1
SLC4A3	Del_12q24.33	0.95	1
SMAD4	Del_9q21.11	0.95	1
SMAD4	Del_12q24.33	0.95	1
STK19	Del_15q15.1	0.95	1
STK19	Del_16q24.3	0.95	1
STRA8	TP53	0.95	1
TRERF1	1p-Amp	0.95	1
ZNF608	Del_3q29	0.95	1
17q-Amp	Amp_12q14.1	0.95	1
15q-Del	Amp_3q26.2	0.95	1
18q-Del	Del_3q11.1	0.95	1
3q-Del	6q-Del	0.95	1
Amp_12q14.1	Del_11q23.1	0.95	1
Amp_18q11.2	Amp_22q11.22	0.95	1
Amp_22q11.22	Del_11q25	0.95	1
Del_2q22.1	Del_5q12.1	0.95	1
Del_11p15.5	Del_12q24.33	0.95	1
EPHA3	Del_1p36.13	0.951	1
EPHA5	MAP2	0.951	1
G3BP1	NRAS	0.951	1
GAGE2A	NRAS	0.951	1
KCNQ5	18q-Del	0.951	1
MGA	Del_13q34	0.951	1
NLGN4X	Amp_3q26.2	0.951	1
NLGN4X	Del_19q13.33	0.951	1
NLRP5	8q-Amp	0.951	1
NRAS	RIT1	0.951	1
NRAS	RPL5	0.951	1
NRAS	STRA8	0.951	1
OR2L13	Del_18q21.32	0.951	1
PAK1	6q-Del	0.951	1
PDGFRA	TCEAL5	0.951	1
PDGFRA	Amp_13q33.3	0.951	1
PPP3CA	5p-Amp	0.951	1
PTPRU	Del_14q32.33	0.951	1
SLAMF9	5p-Amp	0.951	1
SLC4A3	Del_14q32.33	0.951	1
SLC4A3	Del_Xp22.2	0.951	1
SMARCA4	Amp_19q12	0.951	1
TP53	U2AF1	0.951	1
U2AF1	17p-Del	0.951	1
ZEB1	Amp_13q33.3	0.951	1
5p-Amp	13q-Del	0.951	1
5p-Amp	Del_12p13.2	0.951	1
5p-Amp	Del_22q13.32	0.951	1
15q-Del	Del_14q32.33	0.951	1
17p-Del	Amp_7q31.2	0.951	1
18p-Del	Amp_14q13.3	0.951	1
19p-Del	Amp_20q13.33	0.951	1
6q-Del	Del_12q12	0.951	1
Amp_3q26.2	Del_13q34	0.951	1
Amp_6p21.1	Del_9p23	0.951	1
Amp_13q33.3	Del_4q34.3	0.951	1
Amp_14q13.3	Del_11q25	0.951	1
Amp_17q23.1	Del_13q34	0.951	1
Del_16q24.3	Del_18q21.32	0.951	1
ADAMTS19	Amp_8q24.21	0.952	1
ARID1A	Del_Xp22.2	0.952	1
EPHA5	Del_12p13.2	0.952	1
ERBB2	17q-Amp	0.952	1
FAM65C	9p-Del	0.952	1
FAM65C	Del_22q13.32	0.952	1
GNAS	MMP16	0.952	1
OR2L13	Del_9p23	0.952	1
PAPPA2	Del_Xp22.2	0.952	1
RIT1	Del_10q26.3	0.952	1
ROBO2	SMARCA4	0.952	1
RPL5	Amp_10p15.1	0.952	1
SLAMF9	1q-Amp	0.952	1
STRA8	TPTE	0.952	1
STRA8	Del_10q26.3	0.952	1
WT1	Del_22q13.32	0.952	1
7p-Amp	Del_14q32.33	0.952	1
5q-Del	Del_18q23	0.952	1
9q-Del	Amp_7p11.2	0.952	1
Amp_3q26.2	Del_16q23.1	0.952	1
Amp_5p15.33	Del_13q34	0.952	1
Amp_6p21.1	Amp_12q15	0.952	1
Amp_8q24.21	Del_1p36.13	0.952	1
Amp_11q13.3	Del_9q21.11	0.952	1
Amp_18q11.2	Del_9p23	0.952	1
Amp_20q13.33	Del_11q23.1	0.952	1
Amp_20q13.33	Del_Xp22.2	0.952	1
Del_3p26.2	Del_11q23.1	0.952	1
Del_10p15.3	Del_15q15.1	0.952	1
Del_21q11.2	Del_Xp22.2	0.952	1
ABCB1	9q-Del	0.953	1
ARID1A	9q-Del	0.953	1
ATM	Amp_14q13.3	0.953	1
MAP2	RBM10	0.953	1
NLRP5	TP53	0.953	1
NLRP5	Amp_6p21.1	0.953	1
OR2L13	Del_19p13.3	0.953	1
PDGFRA	Amp_17q12	0.953	1
RBM10	SETD2	0.953	1
TGFBR3	Amp_7p11.2	0.953	1
TPTE	Amp_1q21.3	0.953	1
TPTE	Amp_6p21.1	0.953	1
U2AF1	Del_6q26	0.953	1
ZEB1	5p-Amp	0.953	1
1q-Amp	5p-Amp	0.953	1
7p-Amp	Amp_8q24.21	0.953	1
19q-Del	Del_1p13.1	0.953	1
9p-Del	Del_3q29	0.953	1
Amp_6p21.1	Del_15q15.1	0.953	1
Amp_12q14.1	Del_21q11.2	0.953	1
Amp_12q15	Del_15q15.1	0.953	1
Del_2q22.1	Del_9p21.3	0.953	1
Del_3q29	Del_22q13.32	0.953	1
Del_4q34.3	Del_19q13.33	0.953	1
Del_6q14.3	Del_9p21.3	0.953	1
Del_10p15.3	Del_13q12.11	0.953	1
ADAMTS19	Del_16q23.1	0.954	1
CTNNB1	STIM1	0.954	1
CXCR7	EPHA3	0.954	1
EPHA3	NLRP6	0.954	1
LRP1B	NLRP5	0.954	1
NLGN4X	PRKCG	0.954	1
NLRP5	U2AF1	0.954	1
NLRP6	Del_19p13.2	0.954	1
OR2L13	17p-Del	0.954	1
PPP3CA	7p-Amp	0.954	1
PPP3CA	Del_16q23.1	0.954	1
SIP1	Amp_12q15	0.954	1
SMARCA4	Del_11p15.5	0.954	1
TGFBR3	Amp_8q24.21	0.954	1
17q-Amp	Del_13q34	0.954	1
1q-Amp	Amp_7p11.2	0.954	1
17p-Del	18p-Del	0.954	1
21q-Del	Amp_8q24.21	0.954	1
22q-Del	Amp_1p34.3	0.954	1
22q-Del	Amp_4q12	0.954	1
22q-Del	Del_3q11.1	0.954	1
Amp_1p34.3	Del_10p15.3	0.954	1
Amp_6p21.1	Del_10q26.3	0.954	1
Amp_7p11.2	Del_14q32.33	0.954	1
Amp_20q13.33	Del_2q22.1	0.954	1
Del_1p36.13	Del_8p23.2	0.954	1
Del_1p13.1	Del_16q23.1	0.954	1
Del_2q22.1	Del_16q23.1	0.954	1
Del_5q12.1	Del_9p23	0.954	1
Del_10q26.3	Del_19q13.33	0.954	1
Del_11p15.5	Del_15q11.2	0.954	1
APC	LRP1B	0.955	1
ARID2	Del_19p13.2	0.955	1
CSMD3	Amp_6p21.1	0.955	1
CXCR7	TTN	0.955	1
CXCR7	Del_1p36.13	0.955	1
EGFR	8p-Del	0.955	1
EMG1	Del_5q12.1	0.955	1
EPHB1	PAPPA2	0.955	1
GNAS	PRKCG	0.955	1
GNAS	Amp_22q11.22	0.955	1
GNAS	Del_10p15.3	0.955	1
LRP1B	Del_3q29	0.955	1
LRP1B	Del_4q34.3	0.955	1
NF1	PTPRU	0.955	1
NF1	TRERF1	0.955	1
NFE2L2	Del_19q13.33	0.955	1
NLRP6	Del_1p36.13	0.955	1
OR2L13	18p-Del	0.955	1
OR2L13	Del_11q25	0.955	1
OR2L13	Del_18q23	0.955	1
PAK1	Del_9p23	0.955	1
PAPPA2	STRA8	0.955	1
PAPPA2	Amp_19q12	0.955	1
PAPPA2	Del_3p21.31	0.955	1
PIK3CA	Del_3p21.31	0.955	1
RB1	Del_11q25	0.955	1
STK19	Amp_19q12	0.955	1
TCEAL5	Amp_13q33.3	0.955	1
TP53	WT1	0.955	1
TTN	Del_12q24.33	0.955	1
U2AF1	Amp_14q13.3	0.955	1
1p-Amp	Del_1p36.13	0.955	1
18p-Del	Del_6q26	0.955	1
19p-Del	Amp_6p21.1	0.955	1
Amp_8q24.21	Amp_19q12	0.955	1
Amp_12q14.1	Del_9p21.3	0.955	1
Amp_19q12	Del_12p13.2	0.955	1
Del_1p36.13	Del_12q24.33	0.955	1
Del_6q26	Del_11q25	0.955	1
ABCB1	Amp_5p15.33	0.956	1
APC	KEAP1	0.956	1
EMG1	5p-Amp	0.956	1
EPHA3	MMP16	0.956	1
FAM65C	PHKA1	0.956	1
FAM65C	SLAMF9	0.956	1
FAM65C	Del_2q22.1	0.956	1
G3BP1	Del_19p13.3	0.956	1
GNAS	Del_9q21.11	0.956	1
KCNQ5	Amp_6p21.1	0.956	1
MET	PDGFRA	0.956	1
MET	RIT1	0.956	1
MMP16	Amp_5p15.33	0.956	1
PDGFRA	20q-Amp	0.956	1
PHKA1	TGFBR3	0.956	1
PHKA1	19q-Del	0.956	1
PHKA1	Del_4q22.1	0.956	1
PPP3CA	WDR66	0.956	1
PPP3CA	19q-Del	0.956	1
PPP3CA	Del_4q22.1	0.956	1
PTPRU	Del_10q26.3	0.956	1
RIT1	5q-Del	0.956	1
RIT1	Del_19p13.3	0.956	1
ROBO2	SIP1	0.956	1
RPL5	5q-Del	0.956	1
SIP1	Amp_5p13.1	0.956	1
SIP1	Amp_12q14.1	0.956	1
SLAMF9	WT1	0.956	1
SLAMF9	Del_4q22.1	0.956	1
SMAD4	Amp_14q13.3	0.956	1
SMAD4	Del_10q26.3	0.956	1
STRA8	5q-Del	0.956	1
TRERF1	Amp_10p15.1	0.956	1
TRERF1	Amp_14q13.3	0.956	1
17q-Amp	Del_13q12.11	0.956	1
17q-Amp	Del_17p13.3	0.956	1
1q-Amp	Del_12p13.2	0.956	1
15q-Del	Amp_14q13.3	0.956	1
18q-Del	Amp_19q12	0.956	1
3p-Del	Del_9p21.3	0.956	1
6q-Del	Del_5q12.1	0.956	1
8p-Del	Del_3q29	0.956	1
Amp_1q21.3	Del_16q24.3	0.956	1
Amp_5p15.33	Del_17p13.3	0.956	1
Amp_10p15.1	Del_11p15.5	0.956	1
Amp_22q11.22	Del_17p13.3	0.956	1
Del_2q22.1	Del_4q22.1	0.956	1
Del_15q15.1	Del_18q23	0.956	1
ADAMTS19	Del_Xp22.2	0.957	1
CSMD3	Amp_11q13.3	0.957	1
CXCR7	MAP2	0.957	1
CXCR7	MMP16	0.957	1
EMG1	Del_16q23.1	0.957	1
EPHA5	NRAS	0.957	1
ERBB2	FCRLA	0.957	1
ERBB2	3q-Del	0.957	1
KEAP1	PHKA1	0.957	1
KEAP1	PPP3CA	0.957	1
MAP2	Del_12q24.33	0.957	1
NLGN4X	SMARCA4	0.957	1
OR2L13	9p-Del	0.957	1
RB1	Del_22q13.32	0.957	1
RBM10	Del_2q22.1	0.957	1
SMARCA4	Del_16q23.1	0.957	1
STK11	TCEAL5	0.957	1
STK19	Del_16q23.1	0.957	1
U2AF1	Amp_1p34.3	0.957	1
U2AF1	Del_3q11.1	0.957	1
19p-Del	Del_Xp22.2	0.957	1
3q-Del	Amp_6p21.1	0.957	1
8p-Del	Del_3q11.1	0.957	1
9p-Del	Amp_18q11.2	0.957	1
Amp_1p34.3	Amp_6p21.1	0.957	1
Amp_6p21.1	Del_3q11.1	0.957	1
Amp_7q31.2	Del_15q15.1	0.957	1
Amp_8q24.21	Del_15q11.2	0.957	1
Amp_11q13.3	Del_15q11.2	0.957	1
Amp_19q12	Del_16q24.3	0.957	1
Del_1p36.13	Del_11q23.1	0.957	1
Del_5q31.1	Del_9p21.3	0.957	1
Del_9p21.3	Del_15q15.1	0.957	1
APC	TTN	0.958	1
ARID1A	Del_4q34.3	0.958	1
ATM	Del_11q23.1	0.958	1
CACNA1F	TTN	0.958	1
DNMT3A	Amp_7q31.2	0.958	1
DNMT3A	Amp_19q12	0.958	1
DNMT3A	Del_5q12.1	0.958	1
EPHA5	MGA	0.958	1
FAM65C	PIK3CA	0.958	1
FTSJD1	Amp_5p15.33	0.958	1
MGA	RBM10	0.958	1
MGA	9q-Del	0.958	1
NFE2L2	SETD2	0.958	1
NLGN4X	Del_21q11.2	0.958	1
NLRP5	RB1	0.958	1
NLRP5	SMAD4	0.958	1
NLRP5	Del_11q25	0.958	1
PDGFRA	Del_3p26.2	0.958	1
PTPRU	Del_5q31.1	0.958	1
RB1	Amp_1p34.3	0.958	1
RB1	Amp_4q12	0.958	1
ROBO2	Del_10q26.3	0.958	1
SIP1	Del_13q34	0.958	1
SLAMF9	Amp_5p13.1	0.958	1
SLC4A3	Del_5q31.1	0.958	1
STK11	Del_11q25	0.958	1
STK19	TP53	0.958	1
TRERF1	Del_16q24.3	0.958	1
U2AF1	Del_17p13.3	0.958	1
WDR66	Del_12p13.2	0.958	1
WT1	Amp_12p12.1	0.958	1
1q-Amp	Amp_5p15.33	0.958	1
1q-Amp	Del_9p23	0.958	1
20q-Amp	Del_9p23	0.958	1
7q-Amp	Amp_Xq28	0.958	1
13q-Del	19q-Del	0.958	1
13q-Del	21q-Del	0.958	1
15q-Del	Amp_7p11.2	0.958	1
15q-Del	Del_5q31.1	0.958	1
18p-Del	Del_15q15.1	0.958	1
21q-Del	Amp_12p12.1	0.958	1
9q-Del	Del_3q29	0.958	1
Amp_12p12.1	Del_4q22.1	0.958	1
Amp_12q14.1	Del_10q26.3	0.958	1
Del_4q22.1	Del_12p13.2	0.958	1
Del_6q14.3	Del_12q24.33	0.958	1
ACVR1B	SLC4A3	0.959	1
ACVR1B	TRERF1	0.959	1
ARID1A	TP53	0.959	1
ARID2	CDKN2A	0.959	1
ARID2	17q-Amp	0.959	1
CDKN2A	FTSJD1	0.959	1
CTNNB1	Del_19p13.3	0.959	1
EMG1	RBM10	0.959	1
FTSJD1	PRKCG	0.959	1
KCNQ5	ROBO2	0.959	1
KCNQ5	SLC4A3	0.959	1
KCNQ5	15q-Del	0.959	1
MAP2	Del_4q34.3	0.959	1
NLGN4X	PAPPA2	0.959	1
NUDT11	SIP1	0.959	1
PAK1	PTPRU	0.959	1
PAK1	SLC4A3	0.959	1
PAK1	SMAD4	0.959	1
PIK3CA	Amp_20q13.33	0.959	1
PRKCG	3p-Del	0.959	1
SETD2	8p-Del	0.959	1
SIP1	STK19	0.959	1
SLC4A3	Amp_5p13.1	0.959	1
SMAD4	STIM1	0.959	1
SMAD4	ZNF608	0.959	1
STRA8	9p-Del	0.959	1
STRA8	Del_22q13.32	0.959	1
ZNF608	15q-Del	0.959	1
15q-Del	Amp_5p13.1	0.959	1
Amp_5p15.33	Del_16q24.3	0.959	1
Amp_20q13.33	Del_12p13.2	0.959	1
Amp_20q13.33	Del_16q23.1	0.959	1
Del_3q29	Del_18q21.32	0.959	1
Del_6q14.3	Del_9p23	0.959	1
Del_9p21.3	Del_10p15.3	0.959	1
ADAMTS19	ROBO2	0.96	1
ADAMTS19	Amp_5p15.33	0.96	1
APC	GAGE2A	0.96	1
BRAF	CXCR7	0.96	1
BRAF	LRP1B	0.96	1
BRAF	NLRP6	0.96	1
CDKN2A	CXCR7	0.96	1
CXCR7	Amp_3q26.2	0.96	1
CXCR7	Amp_22q11.22	0.96	1
EGFR	Amp_1p34.3	0.96	1
EPHA3	Amp_17q12	0.96	1
EPHA5	22q-Del	0.96	1
ERBB2	Amp_7q31.2	0.96	1
ERBB2	Del_5q12.1	0.96	1
KEAP1	NUDT11	0.96	1
KRAS	Del_17p13.3	0.96	1
LRP1B	Amp_13q33.3	0.96	1
MGA	Del_9p23	0.96	1
NFE2L2	Del_19p13.3	0.96	1
NLRP5	Amp_14q13.3	0.96	1
NLRP6	20p-Amp	0.96	1
PAPPA2	Del_18q21.32	0.96	1
PDGFRA	PPP3CA	0.96	1
PHKA1	Del_4q34.3	0.96	1
PPP3CA	7q-Amp	0.96	1
PPP3CA	Del_4q34.3	0.96	1
ROBO2	Amp_1p34.3	0.96	1
RPL5	Del_3q29	0.96	1
SLAMF9	Del_4q34.3	0.96	1
STRA8	5p-Amp	0.96	1
TPTE	Del_15q15.1	0.96	1
17q-Amp	1p-Amp	0.96	1
1p-Amp	Amp_17q23.1	0.96	1
1p-Amp	Amp_22q11.22	0.96	1
1q-Amp	8q-Amp	0.96	1
20q-Amp	Amp_17q12	0.96	1
5p-Amp	Del_14q32.33	0.96	1
8q-Amp	Amp_1p34.3	0.96	1
5q-Del	Amp_17q12	0.96	1
Amp_7p11.2	Amp_20q13.33	0.96	1
Amp_22q11.22	Del_19p13.2	0.96	1
ABCB1	MAP2	0.961	1
ABCB1	MMP16	0.961	1
ADAMTS19	Amp_14q13.3	0.961	1
ARID1A	Del_9p21.3	0.961	1
ARID2	CACNA1F	0.961	1
ARID2	TPTE	0.961	1
CACNA1F	FAM65C	0.961	1
CACNA1F	TGFBR3	0.961	1
CACNA1F	WT1	0.961	1
CXCR7	Del_8p23.2	0.961	1
EPHA3	Amp_17q23.1	0.961	1
EPHA5	17q-Amp	0.961	1
EPHB1	Del_10p15.3	0.961	1
KCNQ5	Amp_5p13.1	0.961	1
MGA	Del_19p13.2	0.961	1
NFE2L2	PPP3CA	0.961	1
NFE2L2	SLAMF9	0.961	1
NLGN4X	Amp_10p15.1	0.961	1
PAK1	Del_13q34	0.961	1
PHKA1	TCEAL5	0.961	1
PHKA1	Amp_13q33.3	0.961	1
PIK3CA	Del_14q32.33	0.961	1
PTPRU	TPTE	0.961	1
PTPRU	20q-Amp	0.961	1
PTPRU	5q-Del	0.961	1
SLAMF9	TCEAL5	0.961	1
SLC4A3	TPTE	0.961	1
SLC4A3	20q-Amp	0.961	1
SLC4A3	5q-Del	0.961	1
SRPX	6q-Del	0.961	1
TPTE	Del_11p15.5	0.961	1
TRERF1	20q-Amp	0.961	1
WDR66	22q-Del	0.961	1
20q-Amp	15q-Del	0.961	1
19q-Del	Del_10p15.3	0.961	1
21q-Del	6q-Del	0.961	1
5q-Del	Amp_8p11.21	0.961	1
9p-Del	Amp_8p11.21	0.961	1
Amp_17q23.1	Del_22q13.32	0.961	1
Amp_18q11.2	Del_13q12.11	0.961	1
Amp_20q13.33	Del_10q26.3	0.961	1
Amp_Xq28	Del_9p21.3	0.961	1
Del_5q12.1	Del_10p15.3	0.961	1
Del_10q26.3	Del_13q34	0.961	1
Del_12p13.2	Del_Xp22.2	0.961	1
ADAMTS19	TCEAL5	0.962	1
ADAMTS19	Amp_13q33.3	0.962	1
ARID1A	PAPPA2	0.962	1
ATM	Amp_Xq28	0.962	1
ATM	Del_21q11.2	0.962	1
BRAF	1q-Amp	0.962	1
CXCR7	SMARCA4	0.962	1
CXCR7	Del_15q11.2	0.962	1
EMG1	Del_4q34.3	0.962	1
ERBB2	SRPX	0.962	1
ERBB2	TGFBR3	0.962	1
FAM65C	Amp_14q13.3	0.962	1
FCRLA	5p-Amp	0.962	1
FCRLA	Del_18q23	0.962	1
GNAS	Del_3q11.1	0.962	1
GNAS	Del_9p23	0.962	1
KRAS	NLRP5	0.962	1
NF1	PHKA1	0.962	1
NLGN4X	Del_5q31.1	0.962	1
NLRP6	Del_15q11.2	0.962	1
NUDT11	ZEB1	0.962	1
OR2L13	PAPPA2	0.962	1
PAPPA2	Amp_Xq28	0.962	1
PDGFRA	STK19	0.962	1
SRPX	Amp_14q13.3	0.962	1
SRPX	Del_6q14.3	0.962	1
STK19	7q-Amp	0.962	1
WDR66	Amp_14q13.3	0.962	1
1q-Amp	Amp_17q23.1	0.962	1
18q-Del	Amp_8q24.21	0.962	1
5q-Del	Amp_6p21.1	0.962	1
9q-Del	Del_15q11.2	0.962	1
Amp_11q13.3	Del_15q15.1	0.962	1
Amp_13q33.3	Del_1p13.1	0.962	1
Amp_14q13.3	Del_17p13.3	0.962	1
Del_3q11.1	Del_6q26	0.962	1
Del_3q11.1	Del_18q23	0.962	1
Del_13q34	Del_15q15.1	0.962	1
Del_15q11.2	Del_19p13.3	0.962	1
ABCB1	SIP1	0.963	1
ABCB1	17q-Amp	0.963	1
APC	PDGFRA	0.963	1
ARID1A	Amp_17q12	0.963	1
BRAF	FTSJD1	0.963	1
BRAF	PDGFRA	0.963	1
BRAF	3p-Del	0.963	1
CDKN2A	MAP2	0.963	1
GAGE2A	Amp_12p12.1	0.963	1
GNAS	Del_6q26	0.963	1
KEAP1	Del_4q34.3	0.963	1
MAP2	20p-Amp	0.963	1
MGA	3p-Del	0.963	1
MMP16	SIP1	0.963	1
MMP16	17q-Amp	0.963	1
MMP16	Amp_22q11.22	0.963	1
NLGN4X	Amp_6p21.1	0.963	1
PAPPA2	Del_10q26.3	0.963	1
PDGFRA	Amp_17q23.1	0.963	1
STIM1	Del_1p36.13	0.963	1
STRA8	Amp_12p12.1	0.963	1
TTN	Amp_8q24.21	0.963	1
U2AF1	Del_16q23.1	0.963	1
5p-Amp	Del_13q12.11	0.963	1
5p-Amp	Del_17p13.3	0.963	1
7q-Amp	Amp_17q23.1	0.963	1
7q-Amp	Del_9q21.11	0.963	1
3p-Del	Amp_3q26.2	0.963	1
9p-Del	Amp_13q33.3	0.963	1
Amp_4q12	Del_13q34	0.963	1
Amp_5p15.33	Del_16q23.1	0.963	1
Amp_5p13.1	Del_13q12.11	0.963	1
Amp_10p15.1	Del_1p13.1	0.963	1
Amp_17q23.1	Del_4q34.3	0.963	1
Amp_Xq28	Del_19q13.33	0.963	1
Del_4q34.3	Del_9q21.11	0.963	1
ABCB1	Amp_12p12.1	0.964	1
ABCB1	Amp_17q12	0.964	1
ADAMTS19	PDGFRA	0.964	1
ADAMTS19	Del_13q34	0.964	1
CTNNB1	G3BP1	0.964	1
CTNNB1	RIT1	0.964	1
CXCR7	Del_3q11.1	0.964	1
EPHA5	SMARCA4	0.964	1
EPHA5	20q-Amp	0.964	1
EPHA5	5q-Del	0.964	1
ERBB2	1q-Amp	0.964	1
FCRLA	LRP1B	0.964	1
G3BP1	Amp_1q21.3	0.964	1
LRP1B	Amp_4q12	0.964	1
NF1	NRAS	0.964	1
NF1	Amp_19q12	0.964	1
NLRP6	Amp_1p34.3	0.964	1
PHKA1	Del_19q13.33	0.964	1
PPP3CA	Amp_17q12	0.964	1
PPP3CA	Del_19q13.33	0.964	1
PRKCG	Del_Xp22.2	0.964	1
SMAD4	TTN	0.964	1
STRA8	Amp_1q21.3	0.964	1
TCEAL5	TTN	0.964	1
U2AF1	1q-Amp	0.964	1
1q-Amp	20p-Amp	0.964	1
20p-Amp	Del_14q32.33	0.964	1
19p-Del	Del_4q34.3	0.964	1
Amp_4q12	Del_12q24.33	0.964	1
Amp_6p21.1	Amp_7q31.2	0.964	1
Amp_12p12.1	Del_11q25	0.964	1
Amp_13q33.3	Del_8p23.2	0.964	1
Amp_22q11.22	Del_14q32.33	0.964	1
ARID1A	Del_6q26	0.965	1
ARID2	OR2L13	0.965	1
CSMD3	DNMT3A	0.965	1
CTNNB1	RBM10	0.965	1
CXCR7	EGFR	0.965	1
EGFR	1p-Amp	0.965	1
EGFR	Amp_7q31.2	0.965	1
EPHB1	PTPRU	0.965	1
FAM65C	OR2L13	0.965	1
G3BP1	KEAP1	0.965	1
GAGE2A	KEAP1	0.965	1
KEAP1	RPL5	0.965	1
MMP16	Del_11q23.1	0.965	1
MMP16	Del_14q32.33	0.965	1
NLRP5	NLRP6	0.965	1
NLRP6	8q-Amp	0.965	1
NLRP6	Del_5q31.1	0.965	1
NLRP6	Del_15q15.1	0.965	1
NLRP6	Del_16q24.3	0.965	1
OR2L13	21q-Del	0.965	1
PAPPA2	PTPRU	0.965	1
PAPPA2	SLC4A3	0.965	1
PIK3CA	TCEAL5	0.965	1
PIK3CA	Amp_13q33.3	0.965	1
PTPRU	Amp_19q12	0.965	1
RB1	WDR66	0.965	1
RB1	19q-Del	0.965	1
RB1	3p-Del	0.965	1
SIP1	Amp_17q23.1	0.965	1
SLC4A3	Amp_7q31.2	0.965	1
SLC4A3	Amp_19q12	0.965	1
SRPX	Del_11q25	0.965	1
TPTE	Del_18q23	0.965	1
TRERF1	Del_3p21.31	0.965	1
ZNF608	Amp_7p11.2	0.965	1
7p-Amp	8q-Amp	0.965	1
8q-Amp	Del_18q23	0.965	1
13q-Del	Amp_13q33.3	0.965	1
15q-Del	Amp_7q31.2	0.965	1
3p-Del	Del_11q25	0.965	1
Amp_5p15.33	Amp_8p11.21	0.965	1
Amp_7q31.2	Del_18q21.32	0.965	1
Amp_8q24.21	Del_16q23.1	0.965	1
Amp_18q11.2	Del_4q22.1	0.965	1
Del_6q14.3	Del_Xp22.2	0.965	1
Del_18q23	Del_21q11.2	0.965	1
ABCB1	MGA	0.966	1
ACVR1B	EPHA3	0.966	1
APC	PTPRU	0.966	1
APC	SLC4A3	0.966	1
APC	Del_11p15.5	0.966	1
ARID2	FCRLA	0.966	1
ARID2	LRP1B	0.966	1
ARID2	Del_3q11.1	0.966	1
ATM	NLRP5	0.966	1
ATM	Del_3q11.1	0.966	1
BRAF	MAP2	0.966	1
BRAF	Amp_1q21.3	0.966	1
EMG1	SETD2	0.966	1
EPHA3	KCNQ5	0.966	1
EPHA3	SMARCA4	0.966	1
EPHA3	STIM1	0.966	1
EPHA5	Del_22q13.32	0.966	1
EPHB1	Del_11q25	0.966	1
FAM65C	Amp_6p21.1	0.966	1
FCRLA	3p-Del	0.966	1
NF1	PAPPA2	0.966	1
OR2L13	Amp_7q31.2	0.966	1
OR2L13	Amp_19q12	0.966	1
PPP3CA	TPTE	0.966	1
PRKCG	Amp_3q26.2	0.966	1
PRKCG	Del_9q21.11	0.966	1
SLAMF9	TPTE	0.966	1
SMARCA4	Del_19p13.2	0.966	1
STK19	Amp_Xq28	0.966	1
STK19	Del_21q11.2	0.966	1
WT1	Amp_6p21.1	0.966	1
20p-Amp	7p-Amp	0.966	1
7p-Amp	Del_9q21.11	0.966	1
15q-Del	Del_3q29	0.966	1
21q-Del	Amp_6p21.1	0.966	1
22q-Del	Amp_5p13.1	0.966	1
22q-Del	Del_Xp22.2	0.966	1
3p-Del	Amp_4q12	0.966	1
9q-Del	Amp_20q13.33	0.966	1
Amp_1q21.3	Amp_8p11.21	0.966	1
Amp_1q21.3	Del_3p26.2	0.966	1
Amp_3q26.2	Amp_5p15.33	0.966	1
Amp_3q26.2	Amp_20q13.33	0.966	1
Amp_5p13.1	Del_16q24.3	0.966	1
Amp_7q31.2	Del_3p21.31	0.966	1
Amp_8q24.21	Del_15q15.1	0.966	1
Amp_8q24.21	Del_16q24.3	0.966	1
Amp_18q11.2	Del_5q12.1	0.966	1
Amp_Xq28	Del_19p13.2	0.966	1
ACVR1B	20p-Amp	0.967	1
ACVR1B	Amp_22q11.22	0.967	1
ARID1A	PHKA1	0.967	1
ARID2	Del_19p13.3	0.967	1
CACNA1F	CSMD3	0.967	1
CSMD3	ROBO2	0.967	1
CSMD3	8p-Del	0.967	1
ERBB2	Amp_13q33.3	0.967	1
G3BP1	PTPRU	0.967	1
G3BP1	Del_11p15.5	0.967	1
GAGE2A	SMAD4	0.967	1
MMP16	Amp_8q24.21	0.967	1
NLRP5	RBM10	0.967	1
NLRP6	Del_6q26	0.967	1
PDGFRA	Del_15q11.2	0.967	1
PHKA1	Del_2q22.1	0.967	1
PHKA1	Del_3p26.2	0.967	1
PHKA1	Del_21q11.2	0.967	1
PPP3CA	Del_21q11.2	0.967	1
PRKCG	STIM1	0.967	1
PRKCG	Del_12q12	0.967	1
RIT1	15q-Del	0.967	1
RPL5	TRERF1	0.967	1
SIP1	Del_15q11.2	0.967	1
SLC4A3	Del_19p13.3	0.967	1
SMARCA4	Del_4q34.3	0.967	1
STIM1	17q-Amp	0.967	1
STIM1	Amp_22q11.22	0.967	1
STRA8	TRERF1	0.967	1
TCEAL5	U2AF1	0.967	1
U2AF1	5p-Amp	0.967	1
17q-Amp	Amp_5p15.33	0.967	1
17q-Amp	Del_12q12	0.967	1
7p-Amp	Amp_12q15	0.967	1
7p-Amp	Amp_20q13.33	0.967	1
7q-Amp	Del_15q11.2	0.967	1
8q-Amp	Del_8p23.2	0.967	1
9p-Del	Amp_12q15	0.967	1
Amp_5p15.33	Amp_17q12	0.967	1
Amp_8q24.21	Amp_22q11.22	0.967	1
Amp_10p15.1	Del_12p13.2	0.967	1
Del_2q22.1	Del_3p26.2	0.967	1
Del_3q11.1	Del_13q12.11	0.967	1
Del_3q11.1	Del_17p13.3	0.967	1
Del_4q34.3	Del_15q11.2	0.967	1
ABCB1	STIM1	0.968	1
ABCB1	8q-Amp	0.968	1
ACVR1B	MAP2	0.968	1
ADAMTS19	Amp_17q12	0.968	1
ARID1A	SETD2	0.968	1
ARID1A	Del_8p23.2	0.968	1
CSMD3	TCEAL5	0.968	1
EGFR	3p-Del	0.968	1
EPHA3	Del_10q26.3	0.968	1
EPHB1	ROBO2	0.968	1
KCNQ5	MAP2	0.968	1
MET	NLGN4X	0.968	1
MMP16	STIM1	0.968	1
MMP16	8q-Amp	0.968	1
NLGN4X	5q-Del	0.968	1
NLRP5	SIP1	0.968	1
NUDT11	STK11	0.968	1
PDGFRA	Amp_14q13.3	0.968	1
PRKCG	Amp_10p15.1	0.968	1
PTPRU	Amp_11q13.3	0.968	1
ROBO2	19q-Del	0.968	1
ROBO2	Amp_7q31.2	0.968	1
SRPX	Del_9p21.3	0.968	1
STK11	Del_6q14.3	0.968	1
TGFBR3	8p-Del	0.968	1
17q-Amp	Amp_10p15.1	0.968	1
17q-Amp	Del_10q26.3	0.968	1
20p-Amp	Amp_10p15.1	0.968	1
20p-Amp	Del_10q26.3	0.968	1
22q-Del	Amp_12q15	0.968	1
8p-Del	Amp_8q24.21	0.968	1
Amp_5p13.1	Amp_Xq28	0.968	1
Amp_10p15.1	Del_19p13.2	0.968	1
Amp_12q15	Del_8p23.2	0.968	1
Amp_19q12	Del_18q23	0.968	1
Amp_Xq28	Del_3p26.2	0.968	1
Del_8p23.2	Del_21q11.2	0.968	1
Del_9p21.3	Del_11q23.1	0.968	1
Del_10q26.3	Del_19p13.2	0.968	1
Del_15q15.1	Del_19p13.3	0.968	1
ABCB1	Amp_5p13.1	0.969	1
ABCB1	Amp_Xq28	0.969	1
APC	Amp_8p11.21	0.969	1
APC	Amp_12q15	0.969	1
ARID1A	MMP16	0.969	1
CACNA1F	RBM10	0.969	1
CACNA1F	TCEAL5	0.969	1
CSMD3	Amp_17q12	0.969	1
CTNNB1	7q-Amp	0.969	1
CXCR7	SRPX	0.969	1
CXCR7	TGFBR3	0.969	1
CXCR7	WDR66	0.969	1
EMG1	NRAS	0.969	1
ERBB2	ZEB1	0.969	1
FCRLA	Amp_8p11.21	0.969	1
GNAS	TGFBR3	0.969	1
GNAS	WT1	0.969	1
GNAS	Del_4q22.1	0.969	1
MGA	Del_Xp22.2	0.969	1
NLRP6	TGFBR3	0.969	1
NLRP6	21q-Del	0.969	1
NLRP6	Del_4q22.1	0.969	1
NRAS	NUDT11	0.969	1
NRAS	Amp_5p15.33	0.969	1
PAPPA2	WT1	0.969	1
PAPPA2	Del_4q22.1	0.969	1
PDGFRA	U2AF1	0.969	1
PPP3CA	19p-Del	0.969	1
RPL5	Amp_6p21.1	0.969	1
SIP1	Del_8p23.2	0.969	1
SMARCA4	20p-Amp	0.969	1
SMARCA4	Amp_22q11.22	0.969	1
STIM1	Amp_5p15.33	0.969	1
STRA8	Amp_6p21.1	0.969	1
TCEAL5	Del_10p15.3	0.969	1
TP53	8q-Amp	0.969	1
TP53	Del_18q21.32	0.969	1
WT1	1p-Amp	0.969	1
17q-Amp	17p-Del	0.969	1
1p-Amp	19q-Del	0.969	1
20p-Amp	Del_15q11.2	0.969	1
17p-Del	Amp_22q11.22	0.969	1
18p-Del	Amp_7p11.2	0.969	1
19p-Del	Del_18q21.32	0.969	1
21q-Del	Del_12q24.33	0.969	1
Amp_12p12.1	Amp_14q13.3	0.969	1
Amp_14q13.3	Del_12p13.2	0.969	1
Amp_17q23.1	Del_Xp22.2	0.969	1
Amp_22q11.22	Del_15q11.2	0.969	1
Del_4q22.1	Del_12q24.33	0.969	1
Del_9p21.3	Del_11q25	0.969	1
ABCB1	SMARCA4	0.97	1
APC	ARID1A	0.97	1
BRAF	MGA	0.97	1
CSMD3	U2AF1	0.97	1
CTNNB1	Del_6q26	0.97	1
CXCR7	EPHB1	0.97	1
CXCR7	Amp_19q12	0.97	1
DNMT3A	SLC4A3	0.97	1
EMG1	PIK3CA	0.97	1
EPHA5	NLRP5	0.97	1
FCRLA	Del_Xp22.2	0.97	1
KCNQ5	Amp_17q23.1	0.97	1
MGA	Del_9q21.11	0.97	1
MGA	Del_12q12	0.97	1
NLRP6	Del_3p21.31	0.97	1
NLRP6	Del_17p13.3	0.97	1
NRAS	Del_22q13.32	0.97	1
OR2L13	Amp_11q13.3	0.97	1
OR2L13	Del_Xp22.2	0.97	1
PTPRU	5p-Amp	0.97	1
RB1	Del_11q23.1	0.97	1
RB1	Del_16q23.1	0.97	1
STIM1	Amp_3q26.2	0.97	1
STIM1	Amp_17q23.1	0.97	1
STK11	Del_1p13.1	0.97	1
STK11	Del_2q22.1	0.97	1
STK19	13q-Del	0.97	1
TGFBR3	8q-Amp	0.97	1
TP53	Del_2q22.1	0.97	1
TRERF1	5p-Amp	0.97	1
WDR66	8q-Amp	0.97	1
1p-Amp	Del_3p21.31	0.97	1
1p-Amp	Del_5q12.1	0.97	1
8q-Amp	Del_4q22.1	0.97	1
18p-Del	Del_Xp22.2	0.97	1
3p-Del	Del_9p23	0.97	1
3q-Del	Del_11q23.1	0.97	1
3q-Del	Del_Xp22.2	0.97	1
Amp_3q26.2	Amp_17q23.1	0.97	1
Amp_4q12	Del_11q23.1	0.97	1
Amp_4q12	Del_14q32.33	0.97	1
Amp_7q31.2	Del_16q23.1	0.97	1
Amp_17q23.1	Del_12q12	0.97	1
Amp_19q12	Del_16q23.1	0.97	1
Amp_Xq28	Del_19p13.3	0.97	1
Del_5q12.1	Del_12q24.33	0.97	1
ABCB1	Amp_4q12	0.971	1
ACVR1B	FCRLA	0.971	1
ADAMTS19	EPHA3	0.971	1
ARID1A	Del_13q12.11	0.971	1
ATM	Amp_12q14.1	0.971	1
CTNNB1	Del_8p23.2	0.971	1
EPHA5	FCRLA	0.971	1
EPHB1	GNAS	0.971	1
FCRLA	KCNQ5	0.971	1
FCRLA	STIM1	0.971	1
G3BP1	TTN	0.971	1
G3BP1	Del_9p23	0.971	1
GNAS	Del_3p21.31	0.971	1
KCNQ5	TP53	0.971	1
KRAS	Del_6q14.3	0.971	1
MMP16	3q-Del	0.971	1
MMP16	Amp_10p15.1	0.971	1
NLGN4X	19q-Del	0.971	1
NLRP5	PDGFRA	0.971	1
PAK1	Amp_1p34.3	0.971	1
PAK1	Amp_4q12	0.971	1
PDGFRA	Del_5q31.1	0.971	1
PDGFRA	Del_15q15.1	0.971	1
PDGFRA	Del_16q24.3	0.971	1
ROBO2	22q-Del	0.971	1
SMAD4	9q-Del	0.971	1
STIM1	Amp_4q12	0.971	1
STRA8	Del_1p36.13	0.971	1
TGFBR3	Del_13q34	0.971	1
TPTE	Amp_7q31.2	0.971	1
TRERF1	9q-Del	0.971	1
TTN	Amp_22q11.22	0.971	1
U2AF1	Amp_17q12	0.971	1
WT1	Del_13q34	0.971	1
ZNF608	3q-Del	0.971	1
ZNF608	Amp_1p34.3	0.971	1
5p-Amp	Del_16q23.1	0.971	1
5p-Amp	Del_18q21.32	0.971	1
7p-Amp	Del_15q11.2	0.971	1
7q-Amp	Amp_20q13.33	0.971	1
7q-Amp	Del_16q24.3	0.971	1
15q-Del	Amp_1q21.3	0.971	1
22q-Del	Amp_12q14.1	0.971	1
9p-Del	Del_15q15.1	0.971	1
Amp_6p21.1	Del_19p13.2	0.971	1
Amp_7q31.2	Del_1p36.13	0.971	1
Amp_19q12	Del_1p36.13	0.971	1
Amp_Xq28	Del_17p13.3	0.971	1
Del_1p36.13	Del_3q29	0.971	1
Del_1p13.1	Del_9p21.3	0.971	1
Del_3q11.1	Del_12q12	0.971	1
ADAMTS19	Amp_Xq28	0.972	1
ARID1A	9p-Del	0.972	1
ARID2	FAM65C	0.972	1
ARID2	TGFBR3	0.972	1
ARID2	19q-Del	0.972	1
CACNA1F	STK19	0.972	1
CSMD3	Amp_19q12	0.972	1
CSMD3	Del_5q12.1	0.972	1
CTNNB1	Del_19q13.33	0.972	1
CXCR7	Amp_11q13.3	0.972	1
CXCR7	Del_16q23.1	0.972	1
EPHB1	NLGN4X	0.972	1
ERBB2	SLAMF9	0.972	1
FAM65C	FTSJD1	0.972	1
KEAP1	Amp_7q31.2	0.972	1
KRAS	Amp_12q14.1	0.972	1
MET	Amp_7p11.2	0.972	1
MET	Amp_22q11.22	0.972	1
NF1	TPTE	0.972	1
NFE2L2	Del_11q25	0.972	1
NLGN4X	RPL5	0.972	1
NLGN4X	Amp_19q12	0.972	1
NLGN4X	Del_5q12.1	0.972	1
NLRP5	PRKCG	0.972	1
NLRP5	17q-Amp	0.972	1
NLRP5	20p-Amp	0.972	1
OR2L13	TCEAL5	0.972	1
OR2L13	TP53	0.972	1
PAPPA2	5q-Del	0.972	1
PHKA1	Del_22q13.32	0.972	1
PIK3CA	20q-Amp	0.972	1
PPP3CA	U2AF1	0.972	1
PRKCG	20q-Amp	0.972	1
PRKCG	5q-Del	0.972	1
RB1	Amp_13q33.3	0.972	1
RPL5	Del_13q34	0.972	1
SIP1	Del_5q12.1	0.972	1
SMARCA4	STIM1	0.972	1
TCEAL5	Amp_18q11.2	0.972	1
TGFBR3	3p-Del	0.972	1
ZNF608	Del_6q14.3	0.972	1
17q-Amp	5q-Del	0.972	1
1p-Amp	Amp_8p11.21	0.972	1
20q-Amp	Amp_7p11.2	0.972	1
7p-Amp	18p-Del	0.972	1
13q-Del	5q-Del	0.972	1
15q-Del	Amp_5p15.33	0.972	1
17p-Del	Del_12q12	0.972	1
19p-Del	Amp_Xq28	0.972	1
19q-Del	3p-Del	0.972	1
Amp_5p15.33	Del_11p15.5	0.972	1
Amp_5p13.1	Del_4q22.1	0.972	1
Amp_11q13.3	Del_12q24.33	0.972	1
Amp_17q12	Del_12p13.2	0.972	1
Amp_20q13.33	Del_11q25	0.972	1
Del_2q22.1	Del_22q13.32	0.972	1
Del_4q34.3	Del_6q14.3	0.972	1
Del_6q14.3	Del_12q12	0.972	1
Del_9p23	Del_12p13.2	0.972	1
Del_12p13.2	Del_19q13.33	0.972	1
Del_12q24.33	Del_16q23.1	0.972	1
Del_14q32.33	Del_15q11.2	0.972	1
ARID1A	MGA	0.973	1
BRAF	FCRLA	0.973	1
BRAF	SETD2	0.973	1
BRAF	3q-Del	0.973	1
CACNA1F	PDGFRA	0.973	1
CACNA1F	ZEB1	0.973	1
CSMD3	Del_5q31.1	0.973	1
CXCR7	TCEAL5	0.973	1
EPHA3	TPTE	0.973	1
EPHA5	Amp_14q13.3	0.973	1
KRAS	Del_11q23.1	0.973	1
LRP1B	Del_22q13.32	0.973	1
MGA	8q-Amp	0.973	1
NF1	TTN	0.973	1
NF1	17q-Amp	0.973	1
PDGFRA	22q-Del	0.973	1
PTPRU	8p-Del	0.973	1
RB1	Amp_6p21.1	0.973	1
SIP1	Amp_11q13.3	0.973	1
TCEAL5	Del_12q24.33	0.973	1
U2AF1	Amp_5p15.33	0.973	1
1p-Amp	Amp_13q33.3	0.973	1
1q-Amp	Amp_1p34.3	0.973	1
1q-Amp	Del_3q29	0.973	1
5p-Amp	Del_4q22.1	0.973	1
5p-Amp	Del_15q11.2	0.973	1
18p-Del	Amp_6p21.1	0.973	1
18q-Del	Amp_17q23.1	0.973	1
Amp_1p34.3	Del_10q26.3	0.973	1
Amp_1q21.3	Del_12q24.33	0.973	1
Amp_3q26.2	Del_3q11.1	0.973	1
Amp_3q26.2	Del_21q11.2	0.973	1
Amp_5p13.1	Del_Xp22.2	0.973	1
Amp_7p11.2	Amp_12q15	0.973	1
Amp_12p12.1	Del_8p23.2	0.973	1
Amp_12p12.1	Del_15q11.2	0.973	1
Amp_12q15	Del_11q25	0.973	1
Amp_17q23.1	Del_18q21.32	0.973	1
Del_3q11.1	Del_9q21.11	0.973	1
Del_9p23	Del_16q24.3	0.973	1
ABCB1	Del_5q31.1	0.974	1
ACVR1B	SRPX	0.974	1
ACVR1B	WDR66	0.974	1
ACVR1B	Del_16q24.3	0.974	1
ADAMTS19	MMP16	0.974	1
ARID2	FTSJD1	0.974	1
ARID2	3p-Del	0.974	1
ATM	STRA8	0.974	1
BRAF	Amp_10p15.1	0.974	1
CACNA1F	NLGN4X	0.974	1
CSMD3	SIP1	0.974	1
CXCR7	EPHA5	0.974	1
ERBB2	Amp_Xq28	0.974	1
FAM65C	ZNF608	0.974	1
G3BP1	PRKCG	0.974	1
GAGE2A	PRKCG	0.974	1
KCNQ5	21q-Del	0.974	1
KCNQ5	Del_4q22.1	0.974	1
KRAS	U2AF1	0.974	1
MGA	Amp_14q13.3	0.974	1
MMP16	Del_1p13.1	0.974	1
MMP16	Del_16q24.3	0.974	1
NF1	Amp_7p11.2	0.974	1
NF1	Amp_8q24.21	0.974	1
NLGN4X	22q-Del	0.974	1
NUDT11	OR2L13	0.974	1
NUDT11	Del_11q25	0.974	1
PAK1	Del_4q22.1	0.974	1
PDGFRA	Del_11p15.5	0.974	1
PRKCG	RIT1	0.974	1
PTPRU	TRERF1	0.974	1
PTPRU	15q-Del	0.974	1
PTPRU	Amp_12p12.1	0.974	1
RPL5	Amp_22q11.22	0.974	1
SETD2	U2AF1	0.974	1
SLC4A3	TRERF1	0.974	1
SLC4A3	Del_4q34.3	0.974	1
SLC4A3	Del_11p15.5	0.974	1
SRPX	STIM1	0.974	1
SRPX	Del_12q12	0.974	1
STIM1	WT1	0.974	1
STIM1	21q-Del	0.974	1
STRA8	20p-Amp	0.974	1
STRA8	Amp_22q11.22	0.974	1
TGFBR3	Del_12q12	0.974	1
TPTE	Amp_5p13.1	0.974	1
TPTE	Amp_10p15.1	0.974	1
TRERF1	Del_11p15.5	0.974	1
7p-Amp	Amp_1p34.3	0.974	1
7p-Amp	Amp_4q12	0.974	1
15q-Del	Del_4q34.3	0.974	1
15q-Del	Del_11p15.5	0.974	1
17p-Del	Amp_17q23.1	0.974	1
17p-Del	Del_9q21.11	0.974	1
18p-Del	Amp_10p15.1	0.974	1
19q-Del	Del_12q12	0.974	1
21q-Del	Del_12q12	0.974	1
9q-Del	Amp_6p21.1	0.974	1
Amp_1q21.3	Del_5q12.1	0.974	1
Amp_3q26.2	Amp_10p15.1	0.974	1
Amp_4q12	Amp_20q13.33	0.974	1
Amp_6p21.1	Amp_13q33.3	0.974	1
Amp_7q31.2	Del_17p13.3	0.974	1
Amp_10p15.1	Del_11q25	0.974	1
Amp_11q13.3	Del_1p36.13	0.974	1
Amp_13q33.3	Amp_14q13.3	0.974	1
Amp_14q13.3	Del_18q23	0.974	1
Amp_17q23.1	Del_10q26.3	0.974	1
Del_1p36.13	Del_16q23.1	0.974	1
Del_1p36.13	Del_19p13.3	0.974	1
Del_4q22.1	Del_12q12	0.974	1
Del_5q31.1	Del_12q12	0.974	1
Del_10q26.3	Del_11q25	0.974	1
Del_14q32.33	Del_18q21.32	0.974	1
Del_18q21.32	Del_Xp22.2	0.974	1
ACVR1B	CSMD3	0.975	1
APC	20p-Amp	0.975	1
CTNNB1	Del_1p36.13	0.975	1
DNMT3A	Del_3p26.2	0.975	1
EPHA3	TGFBR3	0.975	1
EPHA3	WDR66	0.975	1
EPHA5	Amp_5p13.1	0.975	1
FCRLA	SMARCA4	0.975	1
LRP1B	8q-Amp	0.975	1
MET	Amp_8q24.21	0.975	1
NRAS	SIP1	0.975	1
OR2L13	TTN	0.975	1
PAPPA2	Amp_14q13.3	0.975	1
PHKA1	22q-Del	0.975	1
SLAMF9	22q-Del	0.975	1
SLC4A3	8q-Amp	0.975	1
SRPX	Del_14q32.33	0.975	1
TGFBR3	Del_19p13.2	0.975	1
TGFBR3	Del_Xp22.2	0.975	1
TP53	Amp_8p11.21	0.975	1
TP53	Amp_17q23.1	0.975	1
TPTE	Del_16q23.1	0.975	1
TRERF1	8q-Amp	0.975	1
WDR66	Del_17p13.3	0.975	1
WDR66	Del_19p13.2	0.975	1
20q-Amp	Amp_8q24.21	0.975	1
15q-Del	Del_18q21.32	0.975	1
19p-Del	Del_8p23.2	0.975	1
19q-Del	Del_11q23.1	0.975	1
19q-Del	Del_14q32.33	0.975	1
5q-Del	Del_10p15.3	0.975	1
Amp_1q21.3	Amp_4q12	0.975	1
Amp_4q12	Del_15q11.2	0.975	1
Amp_5p13.1	Del_11q25	0.975	1
Amp_10p15.1	Del_8p23.2	0.975	1
Amp_17q12	Del_5q31.1	0.975	1
Amp_20q13.33	Del_3q29	0.975	1
Del_1p13.1	Del_8p23.2	0.975	1
Del_4q22.1	Del_Xp22.2	0.975	1
Del_14q32.33	Del_15q15.1	0.975	1
Del_16q24.3	Del_Xp22.2	0.975	1
ABCB1	20q-Amp	0.976	1
ADAMTS19	Del_13q12.11	0.976	1
APC	ATM	0.976	1
APC	13q-Del	0.976	1
ARID1A	EPHA5	0.976	1
ARID1A	Del_12p13.2	0.976	1
ATM	Del_3q29	0.976	1
DNMT3A	Amp_8p11.21	0.976	1
EPHA5	Del_3p26.2	0.976	1
G3BP1	Del_19p13.2	0.976	1
GNAS	NUDT11	0.976	1
MAP2	20q-Amp	0.976	1
MMP16	5q-Del	0.976	1
NLRP5	Amp_20q13.33	0.976	1
PAPPA2	TPTE	0.976	1
PIK3CA	SETD2	0.976	1
PIK3CA	Del_3p26.2	0.976	1
PPP3CA	Del_8p23.2	0.976	1
ROBO2	TCEAL5	0.976	1
RPL5	Del_19p13.2	0.976	1
SIP1	ZEB1	0.976	1
SLAMF9	Amp_12p12.1	0.976	1
SLAMF9	Del_8p23.2	0.976	1
SLC4A3	18q-Del	0.976	1
SMAD4	18q-Del	0.976	1
STRA8	Del_9p21.3	0.976	1
TP53	5q-Del	0.976	1
TP53	Amp_14q13.3	0.976	1
20q-Amp	Amp_1p34.3	0.976	1
5p-Amp	Del_18q23	0.976	1
13q-Del	Amp_Xq28	0.976	1
15q-Del	18q-Del	0.976	1
18q-Del	Amp_17q12	0.976	1
19p-Del	Del_13q12.11	0.976	1
3p-Del	Amp_19q12	0.976	1
3q-Del	5q-Del	0.976	1
3q-Del	Del_9p23	0.976	1
5q-Del	Amp_1p34.3	0.976	1
5q-Del	Del_3q11.1	0.976	1
9p-Del	Amp_1q21.3	0.976	1
Amp_4q12	Del_9p23	0.976	1
Amp_5p13.1	Amp_17q23.1	0.976	1
Amp_8q24.21	Amp_20q13.33	0.976	1
Amp_12p12.1	Del_9p21.3	0.976	1
Amp_17q12	Amp_20q13.33	0.976	1
Amp_20q13.33	Del_16q24.3	0.976	1
Del_4q34.3	Del_12q24.33	0.976	1
Del_6q26	Del_11q23.1	0.976	1
Del_6q26	Del_Xp22.2	0.976	1
Del_9q21.11	Del_18q23	0.976	1
Del_10p15.3	Del_19q13.33	0.976	1
ABCB1	SRPX	0.977	1
ABCB1	STRA8	0.977	1
ABCB1	WT1	0.977	1
ABCB1	Del_4q22.1	0.977	1
ACVR1B	EGFR	0.977	1
ADAMTS19	MGA	0.977	1
ADAMTS19	Del_22q13.32	0.977	1
ARID2	NFE2L2	0.977	1
ARID2	Amp_13q33.3	0.977	1
CDKN2A	EPHB1	0.977	1
CXCR7	LRP1B	0.977	1
CXCR7	Amp_20q13.33	0.977	1
CXCR7	Del_2q22.1	0.977	1
DNMT3A	ROBO2	0.977	1
EMG1	Del_6q14.3	0.977	1
EPHB1	PRKCG	0.977	1
EPHB1	Amp_22q11.22	0.977	1
FCRLA	G3BP1	0.977	1
FTSJD1	Del_14q32.33	0.977	1
G3BP1	MMP16	0.977	1
G3BP1	3q-Del	0.977	1
GAGE2A	Amp_4q12	0.977	1
KEAP1	19q-Del	0.977	1
MAP2	STRA8	0.977	1
MAP2	WT1	0.977	1
MAP2	Del_4q22.1	0.977	1
MGA	Del_1p13.1	0.977	1
MGA	Del_15q15.1	0.977	1
MMP16	RPL5	0.977	1
MMP16	Del_4q22.1	0.977	1
OR2L13	PDGFRA	0.977	1
OR2L13	Del_2q22.1	0.977	1
PAPPA2	PDGFRA	0.977	1
PHKA1	RB1	0.977	1
PHKA1	18p-Del	0.977	1
PPP3CA	1p-Amp	0.977	1
PPP3CA	Amp_18q11.2	0.977	1
PRKCG	TPTE	0.977	1
PTPRU	Del_19q13.33	0.977	1
RB1	Del_2q22.1	0.977	1
RIT1	Del_3q11.1	0.977	1
SLAMF9	Amp_18q11.2	0.977	1
SLAMF9	Del_11q25	0.977	1
SLC4A3	Amp_8q24.21	0.977	1
SLC4A3	Amp_17q12	0.977	1
SMAD4	Del_18q23	0.977	1
SRPX	Amp_8p11.21	0.977	1
STIM1	Del_8p23.2	0.977	1
STK19	Del_6q14.3	0.977	1
STRA8	Amp_1p34.3	0.977	1
TRERF1	Amp_8q24.21	0.977	1
TRERF1	Amp_17q12	0.977	1
TRERF1	Del_19q13.33	0.977	1
ZEB1	18p-Del	0.977	1
17q-Amp	Del_5q12.1	0.977	1
1p-Amp	Amp_20q13.33	0.977	1
20p-Amp	Amp_7p11.2	0.977	1
20p-Amp	Amp_7q31.2	0.977	1
20p-Amp	Del_3p21.31	0.977	1
15q-Del	Del_18q23	0.977	1
18p-Del	Del_2q22.1	0.977	1
3p-Del	Amp_13q33.3	0.977	1
3p-Del	Del_Xp22.2	0.977	1
9p-Del	Del_18q23	0.977	1
9q-Del	Amp_12q14.1	0.977	1
Amp_1q21.3	Del_Xp22.2	0.977	1
Amp_3q26.2	Del_1p13.1	0.977	1
Amp_6p21.1	Amp_8q24.21	0.977	1
Amp_7q31.2	Amp_22q11.22	0.977	1
Amp_17q12	Del_6q14.3	0.977	1
Amp_19q12	Amp_22q11.22	0.977	1
Amp_22q11.22	Del_3p21.31	0.977	1
Del_2q22.1	Del_11q25	0.977	1
Del_4q34.3	Del_11q25	0.977	1
Del_8p23.2	Del_12q12	0.977	1
Del_9q21.11	Del_15q15.1	0.977	1
Del_18q23	Del_22q13.32	0.977	1
ABCB1	PAPPA2	0.978	1
ABCB1	Amp_12q14.1	0.978	1
ACVR1B	EPHB1	0.978	1
ARID2	EMG1	0.978	1
ATM	Amp_11q13.3	0.978	1
ATM	Del_16q23.1	0.978	1
DNMT3A	EPHA5	0.978	1
DNMT3A	Amp_22q11.22	0.978	1
EPHA3	NLGN4X	0.978	1
EPHA5	TGFBR3	0.978	1
EPHA5	TPTE	0.978	1
EPHA5	WDR66	0.978	1
EPHA5	WT1	0.978	1
EPHB1	ZEB1	0.978	1
EPHB1	Del_4q34.3	0.978	1
FAM65C	Amp_10p15.1	0.978	1
FTSJD1	PAPPA2	0.978	1
FTSJD1	STK19	0.978	1
GNAS	KRAS	0.978	1
KCNQ5	Amp_19q12	0.978	1
KRAS	LRP1B	0.978	1
KRAS	Del_3q29	0.978	1
NLGN4X	NRAS	0.978	1
NLGN4X	Amp_18q11.2	0.978	1
NLRP6	Amp_17q12	0.978	1
NRAS	Del_13q34	0.978	1
PAK1	Amp_7q31.2	0.978	1
PAPPA2	SIP1	0.978	1
PAPPA2	3p-Del	0.978	1
RB1	5q-Del	0.978	1
STIM1	Amp_7q31.2	0.978	1
STIM1	Amp_13q33.3	0.978	1
STIM1	Amp_19q12	0.978	1
TGFBR3	Amp_10p15.1	0.978	1
TGFBR3	Del_10q26.3	0.978	1
U2AF1	13q-Del	0.978	1
ZEB1	Amp_5p13.1	0.978	1
5p-Amp	Del_5q31.1	0.978	1
7q-Amp	Amp_6p21.1	0.978	1
7q-Amp	Amp_19q12	0.978	1
7q-Amp	Del_3p21.31	0.978	1
8q-Amp	Del_15q11.2	0.978	1
15q-Del	Del_1p36.13	0.978	1
21q-Del	Amp_10p15.1	0.978	1
21q-Del	Del_10q26.3	0.978	1
3q-Del	Del_8p23.2	0.978	1
9q-Del	Amp_11q13.3	0.978	1
Amp_7q31.2	Del_12q12	0.978	1
Amp_14q13.3	Amp_22q11.22	0.978	1
Amp_19q12	Del_12q12	0.978	1
Del_4q22.1	Del_10q26.3	0.978	1
Del_5q12.1	Del_12q12	0.978	1
Del_6q26	Del_12q12	0.978	1
Del_11q25	Del_13q34	0.978	1
ABCB1	Amp_8p11.21	0.979	1
ADAMTS19	Amp_7p11.2	0.979	1
ARID1A	SMAD4	0.979	1
ARID1A	Del_10p15.3	0.979	1
ARID2	EPHA5	0.979	1
ATM	NRAS	0.979	1
BRAF	5q-Del	0.979	1
BRAF	Amp_6p21.1	0.979	1
BRAF	Del_4q22.1	0.979	1
CDKN2A	Amp_11q13.3	0.979	1
CSMD3	FTSJD1	0.979	1
CSMD3	OR2L13	0.979	1
CSMD3	Amp_18q11.2	0.979	1
CTNNB1	NLGN4X	0.979	1
CXCR7	5p-Amp	0.979	1
FAM65C	MGA	0.979	1
KEAP1	SMARCA4	0.979	1
MET	MGA	0.979	1
MGA	SRPX	0.979	1
MGA	TGFBR3	0.979	1
MGA	20q-Amp	0.979	1
NF1	SMARCA4	0.979	1
NLRP5	Amp_10p15.1	0.979	1
PRKCG	Amp_11q13.3	0.979	1
PTPRU	Del_21q11.2	0.979	1
STRA8	Amp_5p13.1	0.979	1
TGFBR3	Del_9q21.11	0.979	1
WDR66	Amp_3q26.2	0.979	1
1q-Amp	Amp_5p13.1	0.979	1
13q-Del	19p-Del	0.979	1
22q-Del	Del_3q29	0.979	1
3p-Del	Amp_11q13.3	0.979	1
Amp_1p34.3	Amp_8q24.21	0.979	1
Amp_3q26.2	Del_4q22.1	0.979	1
Amp_8p11.21	Amp_20q13.33	0.979	1
Amp_10p15.1	Del_15q15.1	0.979	1
Amp_11q13.3	Del_13q12.11	0.979	1
Amp_17q23.1	Del_4q22.1	0.979	1
Del_3q29	Del_10p15.3	0.979	1
Del_10p15.3	Del_21q11.2	0.979	1
Del_12q12	Del_16q23.1	0.979	1
ARID1A	CSMD3	0.98	1
ARID1A	CXCR7	0.98	1
CSMD3	PTPRU	0.98	1
CXCR7	Del_21q11.2	0.98	1
EPHA3	NRAS	0.98	1
EPHB1	Del_11q23.1	0.98	1
EPHB1	Del_14q32.33	0.98	1
FAM65C	STRA8	0.98	1
FCRLA	Amp_5p15.33	0.98	1
G3BP1	SMARCA4	0.98	1
G3BP1	SRPX	0.98	1
G3BP1	WDR66	0.98	1
G3BP1	19q-Del	0.98	1
GNAS	PHKA1	0.98	1
GNAS	ROBO2	0.98	1
GNAS	SLAMF9	0.98	1
LRP1B	1q-Amp	0.98	1
NFE2L2	Del_11q23.1	0.98	1
NLRP6	SETD2	0.98	1
NUDT11	Del_14q32.33	0.98	1
NUDT11	Del_Xp22.2	0.98	1
PHKA1	Amp_1q21.3	0.98	1
PPP3CA	Amp_1q21.3	0.98	1
PTPRU	Amp_6p21.1	0.98	1
PTPRU	Amp_12q15	0.98	1
PTPRU	Del_8p23.2	0.98	1
PTPRU	Del_13q12.11	0.98	1
RIT1	SRPX	0.98	1
RIT1	21q-Del	0.98	1
RIT1	Del_4q22.1	0.98	1
RPL5	WDR66	0.98	1
SETD2	18q-Del	0.98	1
SLC4A3	Amp_6p21.1	0.98	1
STK19	Del_Xp22.2	0.98	1
STRA8	TGFBR3	0.98	1
STRA8	WDR66	0.98	1
STRA8	WT1	0.98	1
STRA8	17p-Del	0.98	1
STRA8	21q-Del	0.98	1
STRA8	Del_4q22.1	0.98	1
TRERF1	Del_8p23.2	0.98	1
U2AF1	1p-Amp	0.98	1
1p-Amp	Amp_Xq28	0.98	1
1p-Amp	Del_3p26.2	0.98	1
1q-Amp	19q-Del	0.98	1
5p-Amp	Amp_6p21.1	0.98	1
8q-Amp	Del_13q34	0.98	1
17p-Del	Del_18q23	0.98	1
6q-Del	Del_3p26.2	0.98	1
6q-Del	Del_15q15.1	0.98	1
Amp_5p13.1	Amp_19q12	0.98	1
Amp_5p13.1	Del_3p21.31	0.98	1
Amp_8q24.21	Del_4q34.3	0.98	1
Amp_12q15	Del_11p15.5	0.98	1
Amp_13q33.3	Del_Xp22.2	0.98	1
Del_5q12.1	Del_Xp22.2	0.98	1
Del_10q26.3	Del_22q13.32	0.98	1
Del_11q25	Del_19q13.33	0.98	1
Del_12q12	Del_17p13.3	0.98	1
Del_14q32.33	Del_Xp22.2	0.98	1
ABCB1	NRAS	0.981	1
ACVR1B	PPP3CA	0.981	1
ADAMTS19	TRERF1	0.981	1
CDKN2A	CSMD3	0.981	1
EMG1	Del_6q26	0.981	1
EPHA3	TCEAL5	0.981	1
EPHA5	KEAP1	0.981	1
KCNQ5	SLAMF9	0.981	1
KEAP1	Del_9p23	0.981	1
LRP1B	Amp_22q11.22	0.981	1
MAP2	NRAS	0.981	1
MAP2	Amp_19q12	0.981	1
MGA	ROBO2	0.981	1
MMP16	NRAS	0.981	1
NUDT11	Del_6q26	0.981	1
PAK1	Del_2q22.1	0.981	1
PHKA1	Amp_6p21.1	0.981	1
SMARCA4	TGFBR3	0.981	1
SMARCA4	WDR66	0.981	1
SMARCA4	Del_4q22.1	0.981	1
STK19	Amp_10p15.1	0.981	1
TGFBR3	17p-Del	0.981	1
TP53	Del_17p13.3	0.981	1
WDR66	Del_15q11.2	0.981	1
ZNF608	Del_2q22.1	0.981	1
17q-Amp	9q-Del	0.981	1
1q-Amp	3p-Del	0.981	1
20p-Amp	Amp_5p13.1	0.981	1
8q-Amp	Del_4q34.3	0.981	1
17p-Del	5q-Del	0.981	1
9q-Del	Amp_22q11.22	0.981	1
9q-Del	Del_12q12	0.981	1
Amp_1q21.3	Del_19q13.33	0.981	1
Amp_5p15.33	Amp_6p21.1	0.981	1
Amp_5p15.33	Amp_10p15.1	0.981	1
Amp_5p15.33	Del_4q34.3	0.981	1
Amp_7q31.2	Amp_8q24.21	0.981	1
Amp_8q24.21	Amp_18q11.2	0.981	1
Amp_11q13.3	Del_4q34.3	0.981	1
Amp_14q13.3	Del_3p26.2	0.981	1
Amp_17q12	Amp_19q12	0.981	1
Del_12p13.2	Del_22q13.32	0.981	1
ABCB1	TP53	0.982	1
ADAMTS19	KEAP1	0.982	1
ARID1A	18p-Del	0.982	1
ARID1A	Del_6q14.3	0.982	1
CDKN2A	SMAD4	0.982	1
CSMD3	SMARCA4	0.982	1
DNMT3A	FCRLA	0.982	1
DNMT3A	Del_3q11.1	0.982	1
EGFR	Del_16q24.3	0.982	1
FTSJD1	SLAMF9	0.982	1
FTSJD1	5p-Amp	0.982	1
GNAS	Amp_5p13.1	0.982	1
NLGN4X	PDGFRA	0.982	1
NLRP6	Del_1p13.1	0.982	1
NRAS	Amp_3q26.2	0.982	1
NRAS	Del_15q11.2	0.982	1
OR2L13	Del_21q11.2	0.982	1
PAPPA2	PRKCG	0.982	1
PHKA1	3p-Del	0.982	1
PRKCG	TP53	0.982	1
PTPRU	Amp_22q11.22	0.982	1
PTPRU	Del_9p23	0.982	1
ROBO2	SLAMF9	0.982	1
SIP1	13q-Del	0.982	1
SLAMF9	3p-Del	0.982	1
SLC4A3	Amp_8p11.21	0.982	1
STRA8	Del_15q15.1	0.982	1
STRA8	Del_16q24.3	0.982	1
TCEAL5	TP53	0.982	1
TPTE	Del_3q11.1	0.982	1
TRERF1	17q-Amp	0.982	1
TRERF1	Amp_12q14.1	0.982	1
TRERF1	Del_9p23	0.982	1
U2AF1	Amp_18q11.2	0.982	1
17q-Amp	Del_6q14.3	0.982	1
1q-Amp	Del_1p13.1	0.982	1
20p-Amp	15q-Del	0.982	1
5p-Amp	Amp_1q21.3	0.982	1
15q-Del	Amp_12q14.1	0.982	1
15q-Del	Amp_22q11.22	0.982	1
18p-Del	Del_3p26.2	0.982	1
18q-Del	Del_19p13.3	0.982	1
19p-Del	Del_10p15.3	0.982	1
19p-Del	Del_12q24.33	0.982	1
19p-Del	Del_16q24.3	0.982	1
9p-Del	Amp_22q11.22	0.982	1
Amp_1p34.3	Amp_19q12	0.982	1
Amp_1p34.3	Del_3p21.31	0.982	1
Amp_1p34.3	Del_5q12.1	0.982	1
Amp_4q12	Amp_19q12	0.982	1
Amp_5p15.33	Del_15q15.1	0.982	1
Amp_5p13.1	Amp_8q24.21	0.982	1
Amp_8p11.21	Del_11q23.1	0.982	1
Amp_8p11.21	Del_14q32.33	0.982	1
Amp_8q24.21	Del_11q23.1	0.982	1
Amp_10p15.1	Amp_13q33.3	0.982	1
Amp_11q13.3	Del_11q23.1	0.982	1
Amp_12p12.1	Del_1p13.1	0.982	1
Amp_12q14.1	Del_11p15.5	0.982	1
Amp_13q33.3	Del_13q12.11	0.982	1
Amp_14q13.3	Del_8p23.2	0.982	1
Amp_18q11.2	Amp_Xq28	0.982	1
Amp_Xq28	Del_11q25	0.982	1
Del_1p13.1	Del_12q24.33	0.982	1
Del_3p26.2	Del_11q25	0.982	1
Del_3q11.1	Del_5q12.1	0.982	1
Del_15q15.1	Del_18q21.32	0.982	1
Del_16q23.1	Del_Xp22.2	0.982	1
ABCB1	TCEAL5	0.983	1
ABCB1	Amp_13q33.3	0.983	1
ACVR1B	Del_4q34.3	0.983	1
APC	BRAF	0.983	1
APC	FAM65C	0.983	1
ARID1A	Del_1p36.13	0.983	1
CACNA1F	PAPPA2	0.983	1
CSMD3	Amp_8q24.21	0.983	1
EMG1	Del_17p13.3	0.983	1
EPHA5	Del_16q23.1	0.983	1
EPHA5	Del_Xp22.2	0.983	1
EPHB1	MGA	0.983	1
EPHB1	Amp_10p15.1	0.983	1
FTSJD1	Del_4q34.3	0.983	1
G3BP1	TCEAL5	0.983	1
G3BP1	Amp_13q33.3	0.983	1
KCNQ5	Del_4q34.3	0.983	1
KEAP1	NLRP5	0.983	1
LRP1B	Del_11p15.5	0.983	1
MGA	Amp_8p11.21	0.983	1
MGA	Del_5q12.1	0.983	1
MMP16	Del_16q23.1	0.983	1
NFE2L2	RPL5	0.983	1
NLGN4X	SLAMF9	0.983	1
NLRP5	WDR66	0.983	1
NLRP5	WT1	0.983	1
NLRP6	TPTE	0.983	1
NRAS	Del_5q31.1	0.983	1
OR2L13	TPTE	0.983	1
OR2L13	8p-Del	0.983	1
PAPPA2	18q-Del	0.983	1
PDGFRA	PRKCG	0.983	1
PDGFRA	20p-Amp	0.983	1
PDGFRA	Amp_22q11.22	0.983	1
PHKA1	Del_13q34	0.983	1
STIM1	7q-Amp	0.983	1
STIM1	Amp_14q13.3	0.983	1
STRA8	TCEAL5	0.983	1
STRA8	Amp_13q33.3	0.983	1
TGFBR3	Del_5q31.1	0.983	1
TPTE	8q-Amp	0.983	1
TPTE	Del_4q34.3	0.983	1
17q-Amp	7q-Amp	0.983	1
20p-Amp	7q-Amp	0.983	1
20q-Amp	Del_16q24.3	0.983	1
7p-Amp	Amp_19q12	0.983	1
3q-Del	Amp_11q13.3	0.983	1
3q-Del	Del_16q23.1	0.983	1
Amp_5p15.33	Amp_20q13.33	0.983	1
Amp_5p15.33	Del_22q13.32	0.983	1
Amp_5p13.1	Amp_20q13.33	0.983	1
Amp_7q31.2	Amp_10p15.1	0.983	1
Amp_7q31.2	Amp_20q13.33	0.983	1
Amp_7q31.2	Del_9q21.11	0.983	1
Amp_12q15	Amp_14q13.3	0.983	1
Amp_14q13.3	Del_2q22.1	0.983	1
Amp_22q11.22	Del_4q34.3	0.983	1
Amp_Xq28	Del_1p36.13	0.983	1
Del_3q29	Del_4q22.1	0.983	1
Del_4q22.1	Del_9p23	0.983	1
Del_9p23	Del_10q26.3	0.983	1
Del_10q26.3	Del_11q23.1	0.983	1
Del_16q23.1	Del_19q13.33	0.983	1
ABCB1	Del_22q13.32	0.984	1
ADAMTS19	7p-Amp	0.984	1
ARID1A	EPHB1	0.984	1
BRAF	Del_13q34	0.984	1
CACNA1F	MGA	0.984	1
EGFR	RB1	0.984	1
EGFR	TP53	0.984	1
EPHA5	STK19	0.984	1
ERBB2	STIM1	0.984	1
KCNQ5	Amp_17q12	0.984	1
MET	NFE2L2	0.984	1
PAK1	U2AF1	0.984	1
PAK1	1q-Amp	0.984	1
PPP3CA	8p-Del	0.984	1
PTPRU	Del_12p13.2	0.984	1
RIT1	Del_3p21.31	0.984	1
SIP1	Del_11q25	0.984	1
SLAMF9	Del_Xp22.2	0.984	1
STRA8	Del_3p21.31	0.984	1
STRA8	Del_5q12.1	0.984	1
TP53	Del_10q26.3	0.984	1
TRERF1	Del_13q34	0.984	1
1p-Amp	Del_12q24.33	0.984	1
8q-Amp	Amp_17q12	0.984	1
8q-Amp	Amp_18q11.2	0.984	1
13q-Del	Del_10p15.3	0.984	1
18q-Del	Del_1p13.1	0.984	1
18q-Del	Del_22q13.32	0.984	1
22q-Del	Del_12p13.2	0.984	1
5q-Del	Del_9p21.3	0.984	1
6q-Del	Del_22q13.32	0.984	1
9q-Del	Amp_14q13.3	0.984	1
9q-Del	Del_11q23.1	0.984	1
9q-Del	Del_14q32.33	0.984	1
Amp_5p15.33	Amp_14q13.3	0.984	1
Amp_5p13.1	Amp_14q13.3	0.984	1
Amp_5p13.1	Amp_17q12	0.984	1
Amp_7q31.2	Amp_Xq28	0.984	1
Amp_10p15.1	Amp_14q13.3	0.984	1
Amp_12p12.1	Del_3p21.31	0.984	1
Amp_14q13.3	Del_10q26.3	0.984	1
Amp_14q13.3	Del_15q15.1	0.984	1
Del_5q31.1	Del_18q23	0.984	1
ABCB1	Amp_18q11.2	0.985	1
CACNA1F	Del_12q24.33	0.985	1
CSMD3	PPP3CA	0.985	1
CSMD3	SLAMF9	0.985	1
CSMD3	Del_2q22.1	0.985	1
CTNNB1	FAM65C	0.985	1
CTNNB1	MAP2	0.985	1
DNMT3A	FAM65C	0.985	1
DNMT3A	MAP2	0.985	1
DNMT3A	TGFBR3	0.985	1
DNMT3A	Amp_18q11.2	0.985	1
EPHA5	TCEAL5	0.985	1
FAM65C	NF1	0.985	1
FTSJD1	NLGN4X	0.985	1
G3BP1	PHKA1	0.985	1
GAGE2A	SLAMF9	0.985	1
GAGE2A	Del_2q22.1	0.985	1
GNAS	SIP1	0.985	1
GNAS	Amp_Xq28	0.985	1
KCNQ5	TTN	0.985	1
MGA	TTN	0.985	1
NLRP5	Amp_7p11.2	0.985	1
NRAS	Amp_19q12	0.985	1
NRAS	Del_5q12.1	0.985	1
PAK1	SETD2	0.985	1
PPP3CA	RPL5	0.985	1
PPP3CA	STRA8	0.985	1
PPP3CA	8q-Amp	0.985	1
RIT1	Del_2q22.1	0.985	1
SLAMF9	Del_18q21.32	0.985	1
SMAD4	3q-Del	0.985	1
SMAD4	Del_3q11.1	0.985	1
SMAD4	Del_9p21.3	0.985	1
STIM1	Amp_Xq28	0.985	1
STIM1	Del_3p26.2	0.985	1
STK11	21q-Del	0.985	1
STK11	Del_6q26	0.985	1
STRA8	8p-Del	0.985	1
STRA8	Del_2q22.1	0.985	1
TTN	Del_4q34.3	0.985	1
ZNF608	7p-Amp	0.985	1
ZNF608	Amp_20q13.33	0.985	1
17q-Amp	Amp_12p12.1	0.985	1
1p-Amp	Del_10p15.3	0.985	1
1q-Amp	Del_14q32.33	0.985	1
20q-Amp	8q-Amp	0.985	1
5p-Amp	Amp_22q11.22	0.985	1
13q-Del	Del_5q31.1	0.985	1
15q-Del	Amp_4q12	0.985	1
19p-Del	Del_1p36.13	0.985	1
19p-Del	Del_6q14.3	0.985	1
19q-Del	Amp_1q21.3	0.985	1
22q-Del	Del_12q24.33	0.985	1
3q-Del	Del_11p15.5	0.985	1
9q-Del	Amp_4q12	0.985	1
Amp_1p34.3	Amp_14q13.3	0.985	1
Amp_1q21.3	Del_9q21.11	0.985	1
Amp_5p15.33	Amp_17q23.1	0.985	1
Amp_5p13.1	Del_12q24.33	0.985	1
Amp_7p11.2	Del_13q12.11	0.985	1
Amp_7p11.2	Del_15q15.1	0.985	1
Amp_8p11.21	Amp_12q14.1	0.985	1
Amp_10p15.1	Del_17p13.3	0.985	1
Amp_11q13.3	Del_10q26.3	0.985	1
Amp_17q12	Amp_22q11.22	0.985	1
Amp_22q11.22	Del_19q13.33	0.985	1
Amp_Xq28	Del_12q12	0.985	1
Del_3p26.2	Del_9p21.3	0.985	1
Del_3p26.2	Del_12q12	0.985	1
Del_3q11.1	Del_11p15.5	0.985	1
Del_10p15.3	Del_17p13.3	0.985	1
Del_12p13.2	Del_15q15.1	0.985	1
Del_12p13.2	Del_16q24.3	0.985	1
ABCB1	Amp_20q13.33	0.986	1
APC	ARID2	0.986	1
APC	FTSJD1	0.986	1
APC	NFE2L2	0.986	1
APC	Amp_13q33.3	0.986	1
ARID1A	8p-Del	0.986	1
ARID1A	Amp_1q21.3	0.986	1
ATM	Amp_17q23.1	0.986	1
CACNA1F	SMAD4	0.986	1
CSMD3	Amp_12p12.1	0.986	1
CTNNB1	NUDT11	0.986	1
CTNNB1	STK19	0.986	1
EPHB1	WDR66	0.986	1
EPHB1	5q-Del	0.986	1
GNAS	TP53	0.986	1
GNAS	TPTE	0.986	1
GNAS	Del_19p13.2	0.986	1
KRAS	Amp_1q21.3	0.986	1
MAP2	Amp_8q24.21	0.986	1
MET	Del_Xp22.2	0.986	1
MGA	Amp_11q13.3	0.986	1
NF1	Amp_Xq28	0.986	1
NFE2L2	Del_3q29	0.986	1
NLGN4X	Del_15q11.2	0.986	1
NLRP5	TPTE	0.986	1
NRAS	Amp_11q13.3	0.986	1
OR2L13	Del_6q26	0.986	1
OR2L13	Del_9q21.11	0.986	1
PDGFRA	Del_Xp22.2	0.986	1
PHKA1	Amp_10p15.1	0.986	1
PHKA1	Del_18q23	0.986	1
PPP3CA	Amp_10p15.1	0.986	1
RB1	Amp_3q26.2	0.986	1
SLAMF9	Del_18q23	0.986	1
SLC4A3	Del_10p15.3	0.986	1
STRA8	Del_16q23.1	0.986	1
TCEAL5	Del_3q29	0.986	1
TGFBR3	Amp_19q12	0.986	1
TGFBR3	Del_3p21.31	0.986	1
TGFBR3	Del_5q12.1	0.986	1
TRERF1	Del_10p15.3	0.986	1
WDR66	Amp_19q12	0.986	1
WT1	Amp_19q12	0.986	1
WT1	Del_8p23.2	0.986	1
20q-Amp	Amp_19q12	0.986	1
20q-Amp	Del_3p21.31	0.986	1
7p-Amp	Amp_11q13.3	0.986	1
13q-Del	Amp_8q24.21	0.986	1
17p-Del	Amp_13q33.3	0.986	1
18p-Del	Del_9q21.11	0.986	1
22q-Del	Del_11p15.5	0.986	1
3q-Del	Del_22q13.32	0.986	1
5q-Del	Del_Xp22.2	0.986	1
6q-Del	Amp_10p15.1	0.986	1
6q-Del	Del_10q26.3	0.986	1
6q-Del	Del_18q23	0.986	1
8p-Del	Del_5q12.1	0.986	1
9p-Del	Amp_4q12	0.986	1
9q-Del	Amp_1q21.3	0.986	1
Amp_1q21.3	Amp_7p11.2	0.986	1
Amp_3q26.2	Amp_11q13.3	0.986	1
Amp_3q26.2	Amp_18q11.2	0.986	1
Amp_7p11.2	Amp_14q13.3	0.986	1
Amp_7p11.2	Del_9p21.3	0.986	1
Amp_13q33.3	Del_15q11.2	0.986	1
Amp_17q12	Del_6q26	0.986	1
Amp_17q23.1	Del_11q25	0.986	1
Amp_18q11.2	Del_9q21.11	0.986	1
Amp_18q11.2	Del_18q23	0.986	1
Amp_18q11.2	Del_19p13.3	0.986	1
Amp_22q11.22	Del_3p26.2	0.986	1
Del_2q22.1	Del_10q26.3	0.986	1
Del_3p26.2	Del_16q23.1	0.986	1
Del_3q11.1	Del_22q13.32	0.986	1
Del_4q22.1	Del_5q12.1	0.986	1
Del_4q22.1	Del_8p23.2	0.986	1
Del_4q34.3	Del_11q23.1	0.986	1
Del_4q34.3	Del_19p13.3	0.986	1
Del_4q34.3	Del_Xp22.2	0.986	1
Del_8p23.2	Del_10p15.3	0.986	1
Del_13q34	Del_15q11.2	0.986	1
ADAMTS19	ZNF608	0.987	1
ADAMTS19	Amp_6p21.1	0.987	1
ARID1A	3p-Del	0.987	1
ARID2	SETD2	0.987	1
CDKN2A	PRKCG	0.987	1
CXCR7	KCNQ5	0.987	1
CXCR7	ZNF608	0.987	1
DNMT3A	GNAS	0.987	1
EMG1	SLC4A3	0.987	1
EPHA5	Amp_10p15.1	0.987	1
ERBB2	GAGE2A	0.987	1
ERBB2	RIT1	0.987	1
FAM65C	PTPRU	0.987	1
GNAS	MAP2	0.987	1
MMP16	PHKA1	0.987	1
MMP16	SLAMF9	0.987	1
MMP16	Amp_5p13.1	0.987	1
MMP16	Amp_14q13.3	0.987	1
NF1	STIM1	0.987	1
NLRP5	Amp_13q33.3	0.987	1
NRAS	PDGFRA	0.987	1
NRAS	ZEB1	0.987	1
NRAS	7q-Amp	0.987	1
OR2L13	PTPRU	0.987	1
PAK1	1p-Amp	0.987	1
PAPPA2	Del_2q22.1	0.987	1
PTPRU	STK19	0.987	1
PTPRU	Amp_5p13.1	0.987	1
PTPRU	Amp_14q13.3	0.987	1
PTPRU	Del_4q22.1	0.987	1
SIP1	Del_11q23.1	0.987	1
SIP1	Del_14q32.33	0.987	1
SIP1	Del_Xp22.2	0.987	1
TGFBR3	TRERF1	0.987	1
TGFBR3	Del_11p15.5	0.987	1
TRERF1	WT1	0.987	1
TRERF1	19q-Del	0.987	1
TTN	Amp_14q13.3	0.987	1
WDR66	Del_11p15.5	0.987	1
ZNF608	1p-Amp	0.987	1
17q-Amp	Amp_22q11.22	0.987	1
1q-Amp	9q-Del	0.987	1
20p-Amp	8q-Amp	0.987	1
20p-Amp	Amp_22q11.22	0.987	1
5p-Amp	Del_13q34	0.987	1
5p-Amp	Del_Xp22.2	0.987	1
7q-Amp	Amp_1p34.3	0.987	1
13q-Del	Del_11q25	0.987	1
15q-Del	18p-Del	0.987	1
15q-Del	Del_19p13.2	0.987	1
18p-Del	Del_11p15.5	0.987	1
19p-Del	Del_12q12	0.987	1
19q-Del	Del_11p15.5	0.987	1
21q-Del	Amp_11q13.3	0.987	1
22q-Del	Del_10p15.3	0.987	1
3q-Del	Del_1p36.13	0.987	1
3q-Del	Del_4q34.3	0.987	1
Amp_3q26.2	Del_22q13.32	0.987	1
Amp_5p15.33	Del_19q13.33	0.987	1
Amp_5p13.1	Del_11p15.5	0.987	1
Amp_12q15	Del_13q34	0.987	1
Amp_13q33.3	Del_5q31.1	0.987	1
Amp_14q13.3	Del_11p15.5	0.987	1
Amp_19q12	Del_15q15.1	0.987	1
Amp_22q11.22	Del_18q21.32	0.987	1
Del_4q22.1	Del_11p15.5	0.987	1
Del_5q31.1	Del_10p15.3	0.987	1
Del_11p15.5	Del_11q25	0.987	1
ADAMTS19	17q-Amp	0.988	1
ARID1A	Del_18q21.32	0.988	1
ARID2	EPHA3	0.988	1
CSMD3	CXCR7	0.988	1
CTNNB1	NFE2L2	0.988	1
CXCR7	GNAS	0.988	1
DNMT3A	SMARCA4	0.988	1
EPHA3	FTSJD1	0.988	1
EPHA3	MGA	0.988	1
EPHB1	NF1	0.988	1
FAM65C	RBM10	0.988	1
FAM65C	9q-Del	0.988	1
FCRLA	Amp_12p12.1	0.988	1
GNAS	Del_12q24.33	0.988	1
KEAP1	20p-Amp	0.988	1
KRAS	Del_11q25	0.988	1
MET	SLAMF9	0.988	1
NF1	Amp_7q31.2	0.988	1
OR2L13	Del_17p13.3	0.988	1
PAPPA2	Amp_4q12	0.988	1
PHKA1	Amp_5p15.33	0.988	1
PPP3CA	5q-Del	0.988	1
RB1	Del_13q12.11	0.988	1
SLAMF9	Del_17p13.3	0.988	1
U2AF1	Del_13q34	0.988	1
17q-Amp	Del_6q26	0.988	1
1q-Amp	9p-Del	0.988	1
20p-Amp	Amp_12q15	0.988	1
20q-Amp	Amp_10p15.1	0.988	1
20q-Amp	Amp_11q13.3	0.988	1
20q-Amp	Del_2q22.1	0.988	1
20q-Amp	Del_10q26.3	0.988	1
20q-Amp	Del_16q23.1	0.988	1
8q-Amp	Amp_5p15.33	0.988	1
8q-Amp	Amp_7q31.2	0.988	1
8q-Amp	Del_21q11.2	0.988	1
17p-Del	Del_11q25	0.988	1
18p-Del	9p-Del	0.988	1
18q-Del	Amp_12p12.1	0.988	1
19p-Del	Del_16q23.1	0.988	1
21q-Del	9q-Del	0.988	1
5q-Del	Amp_5p15.33	0.988	1
5q-Del	Amp_10p15.1	0.988	1
6q-Del	Del_16q23.1	0.988	1
9p-Del	Del_4q34.3	0.988	1
Amp_4q12	Amp_17q12	0.988	1
Amp_6p21.1	Amp_22q11.22	0.988	1
Amp_8p11.21	Del_5q31.1	0.988	1
Amp_8p11.21	Del_9p23	0.988	1
Amp_12q15	Del_22q13.32	0.988	1
Amp_17q23.1	Del_2q22.1	0.988	1
Amp_19q12	Del_18q21.32	0.988	1
Amp_22q11.22	Del_18q23	0.988	1
Del_1p36.13	Del_9p23	0.988	1
Del_2q22.1	Del_9q21.11	0.988	1
Del_2q22.1	Del_17p13.3	0.988	1
Del_3q11.1	Del_19q13.33	0.988	1
Del_3q29	Del_11q23.1	0.988	1
Del_11q23.1	Del_19q13.33	0.988	1
Del_11q25	Del_15q11.2	0.988	1
Del_13q34	Del_Xp22.2	0.988	1
Del_14q32.33	Del_19q13.33	0.988	1
Del_18q21.32	Del_21q11.2	0.988	1
ACVR1B	KCNQ5	0.989	1
ACVR1B	PAK1	0.989	1
ACVR1B	Del_12q12	0.989	1
ARID1A	ATM	0.989	1
ARID1A	Del_18q23	0.989	1
BRAF	Del_11p15.5	0.989	1
CACNA1F	ZNF608	0.989	1
CSMD3	Amp_3q26.2	0.989	1
DNMT3A	3p-Del	0.989	1
EPHA5	NLGN4X	0.989	1
EPHA5	RIT1	0.989	1
EPHB1	TCEAL5	0.989	1
FCRLA	Amp_Xq28	0.989	1
FTSJD1	NLRP6	0.989	1
GNAS	MGA	0.989	1
GNAS	Del_11p15.5	0.989	1
KEAP1	22q-Del	0.989	1
LRP1B	OR2L13	0.989	1
MGA	PTPRU	0.989	1
MGA	TRERF1	0.989	1
MGA	Del_11p15.5	0.989	1
NF1	5p-Amp	0.989	1
NRAS	Amp_Xq28	0.989	1
NRAS	Del_3p26.2	0.989	1
NUDT11	TPTE	0.989	1
PAK1	ZNF608	0.989	1
PAK1	Del_12q12	0.989	1
PAPPA2	8p-Del	0.989	1
PHKA1	SMARCA4	0.989	1
PHKA1	Del_15q11.2	0.989	1
RB1	22q-Del	0.989	1
RPL5	Del_19q13.33	0.989	1
SETD2	Amp_4q12	0.989	1
SLAMF9	Del_3q29	0.989	1
SMARCA4	Del_2q22.1	0.989	1
STIM1	Del_12q12	0.989	1
WDR66	Amp_5p15.33	0.989	1
ZNF608	Del_10p15.3	0.989	1
1p-Amp	3p-Del	0.989	1
1q-Amp	22q-Del	0.989	1
5p-Amp	Amp_7p11.2	0.989	1
7p-Amp	Amp_10p15.1	0.989	1
8q-Amp	Amp_6p21.1	0.989	1
13q-Del	Amp_12q15	0.989	1
18p-Del	22q-Del	0.989	1
18q-Del	22q-Del	0.989	1
18q-Del	3q-Del	0.989	1
18q-Del	5q-Del	0.989	1
18q-Del	Amp_1q21.3	0.989	1
18q-Del	Del_10p15.3	0.989	1
18q-Del	Del_12q24.33	0.989	1
19p-Del	3p-Del	0.989	1
19q-Del	Del_1p36.13	0.989	1
5q-Del	6q-Del	0.989	1
5q-Del	9q-Del	0.989	1
6q-Del	Amp_1q21.3	0.989	1
8p-Del	Amp_17q23.1	0.989	1
Amp_6p21.1	Amp_19q12	0.989	1
Amp_8p11.21	Del_11q25	0.989	1
Amp_10p15.1	Amp_20q13.33	0.989	1
Amp_10p15.1	Del_4q34.3	0.989	1
Amp_12q14.1	Del_13q34	0.989	1
Amp_12q15	Del_9p21.3	0.989	1
Amp_13q33.3	Amp_19q12	0.989	1
Amp_17q12	Del_13q12.11	0.989	1
Amp_17q23.1	Del_11p15.5	0.989	1
Amp_22q11.22	Del_12p13.2	0.989	1
Amp_Xq28	Del_18q23	0.989	1
Del_1p36.13	Del_4q22.1	0.989	1
Del_5q12.1	Del_6q26	0.989	1
Del_16q24.3	Del_19p13.3	0.989	1
ABCB1	Del_9q21.11	0.99	1
ACVR1B	LRP1B	0.99	1
ADAMTS19	NLGN4X	0.99	1
ADAMTS19	Del_18q21.32	0.99	1
APC	Del_10q26.3	0.99	1
ARID1A	STRA8	0.99	1
CTNNB1	Del_11q23.1	0.99	1
EPHA5	Del_5q31.1	0.99	1
FCRLA	8p-Del	0.99	1
FTSJD1	MAP2	0.99	1
GAGE2A	Amp_Xq28	0.99	1
GNAS	9p-Del	0.99	1
KCNQ5	LRP1B	0.99	1
KCNQ5	18p-Del	0.99	1
KCNQ5	Del_11q25	0.99	1
KEAP1	Del_3p21.31	0.99	1
KRAS	WT1	0.99	1
LRP1B	TCEAL5	0.99	1
MAP2	NF1	0.99	1
MGA	MMP16	0.99	1
MGA	PDGFRA	0.99	1
NF1	Amp_11q13.3	0.99	1
NFE2L2	PTPRU	0.99	1
NLGN4X	Amp_5p15.33	0.99	1
NLRP5	PHKA1	0.99	1
NLRP5	SLAMF9	0.99	1
NLRP5	Amp_18q11.2	0.99	1
NLRP6	RIT1	0.99	1
OR2L13	ZNF608	0.99	1
OR2L13	Del_5q31.1	0.99	1
PAK1	RB1	0.99	1
PAK1	Amp_18q11.2	0.99	1
PAK1	Del_19p13.3	0.99	1
PAPPA2	Del_11p15.5	0.99	1
PHKA1	Amp_5p13.1	0.99	1
PPP3CA	Del_16q24.3	0.99	1
PRKCG	STK19	0.99	1
PRKCG	Amp_8p11.21	0.99	1
PTPRU	SMARCA4	0.99	1
PTPRU	Del_15q11.2	0.99	1
RB1	ZNF608	0.99	1
RB1	Del_16q24.3	0.99	1
RIT1	Del_21q11.2	0.99	1
ROBO2	Amp_19q12	0.99	1
RPL5	Del_12q24.33	0.99	1
SIP1	Amp_5p15.33	0.99	1
SLAMF9	Del_5q31.1	0.99	1
SLC4A3	SMARCA4	0.99	1
STK19	Amp_22q11.22	0.99	1
TGFBR3	7q-Amp	0.99	1
TGFBR3	Del_4q34.3	0.99	1
17q-Amp	Amp_8p11.21	0.99	1
1p-Amp	Amp_7p11.2	0.99	1
1q-Amp	Amp_14q13.3	0.99	1
20p-Amp	Amp_8p11.21	0.99	1
20q-Amp	Amp_1q21.3	0.99	1
5p-Amp	Amp_8q24.21	0.99	1
7q-Amp	Del_3p26.2	0.99	1
8q-Amp	Amp_1q21.3	0.99	1
8q-Amp	Amp_7p11.2	0.99	1
8q-Amp	Del_22q13.32	0.99	1
18p-Del	Del_1p36.13	0.99	1
19q-Del	Del_4q34.3	0.99	1
21q-Del	Del_4q34.3	0.99	1
3q-Del	8p-Del	0.99	1
8p-Del	Amp_5p13.1	0.99	1
Amp_1q21.3	Amp_5p13.1	0.99	1
Amp_3q26.2	Amp_5p13.1	0.99	1
Amp_3q26.2	Amp_12p12.1	0.99	1
Amp_5p15.33	Del_14q32.33	0.99	1
Amp_5p15.33	Del_Xp22.2	0.99	1
Amp_8p11.21	Amp_17q12	0.99	1
Amp_8q24.21	Amp_17q23.1	0.99	1
Amp_8q24.21	Del_9q21.11	0.99	1
Amp_8q24.21	Del_18q23	0.99	1
Amp_12p12.1	Amp_18q11.2	0.99	1
Amp_14q13.3	Del_4q22.1	0.99	1
Amp_14q13.3	Del_5q12.1	0.99	1
Amp_17q12	Del_10q26.3	0.99	1
Amp_18q11.2	Del_11q25	0.99	1
Amp_20q13.33	Del_10p15.3	0.99	1
Del_1p36.13	Del_19p13.2	0.99	1
Del_1p13.1	Del_13q34	0.99	1
Del_2q22.1	Del_5q31.1	0.99	1
Del_3p26.2	Del_14q32.33	0.99	1
Del_3p26.2	Del_Xp22.2	0.99	1
Del_3q29	Del_10q26.3	0.99	1
Del_3q29	Del_18q23	0.99	1
Del_4q34.3	Del_21q11.2	0.99	1
Del_5q31.1	Del_9p23	0.99	1
Del_6q14.3	Del_14q32.33	0.99	1
Del_11q25	Del_12q12	0.99	1
Del_11q25	Del_15q15.1	0.99	1
Del_12p13.2	Del_16q23.1	0.99	1
Del_14q32.33	Del_21q11.2	0.99	1
Del_18q23	Del_19p13.3	0.99	1
ARID2	PTPRU	0.991	1
ARID2	TRERF1	0.991	1
CACNA1F	NRAS	0.991	1
CDKN2A	EPHA5	0.991	1
CSMD3	Amp_4q12	0.991	1
CTNNB1	KEAP1	0.991	1
CTNNB1	PPP3CA	0.991	1
CXCR7	Amp_12q15	0.991	1
CXCR7	Del_14q32.33	0.991	1
CXCR7	Del_Xp22.2	0.991	1
EMG1	FCRLA	0.991	1
EPHA5	20p-Amp	0.991	1
EPHB1	Amp_5p15.33	0.991	1
FCRLA	NUDT11	0.991	1
FCRLA	8q-Amp	0.991	1
GNAS	Del_17p13.3	0.991	1
KRAS	17q-Amp	0.991	1
MET	Amp_12q15	0.991	1
NLRP5	PTPRU	0.991	1
NLRP5	TRERF1	0.991	1
OR2L13	18q-Del	0.991	1
PAK1	9p-Del	0.991	1
PDGFRA	SMARCA4	0.991	1
PRKCG	TGFBR3	0.991	1
PRKCG	WDR66	0.991	1
PRKCG	WT1	0.991	1
RB1	Amp_5p13.1	0.991	1
RBM10	Amp_13q33.3	0.991	1
RPL5	19p-Del	0.991	1
SIP1	Del_18q21.32	0.991	1
STK19	Amp_4q12	0.991	1
STK19	Del_3q11.1	0.991	1
TGFBR3	17q-Amp	0.991	1
TGFBR3	20p-Amp	0.991	1
TP53	Del_5q31.1	0.991	1
TPTE	TRERF1	0.991	1
TPTE	Amp_5p15.33	0.991	1
TPTE	Amp_8p11.21	0.991	1
TTN	20q-Amp	0.991	1
WDR66	Amp_22q11.22	0.991	1
WT1	Amp_22q11.22	0.991	1
17q-Amp	Amp_8q24.21	0.991	1
1p-Amp	Amp_6p21.1	0.991	1
5p-Amp	Amp_10p15.1	0.991	1
7q-Amp	17p-Del	0.991	1
8q-Amp	Amp_17q23.1	0.991	1
13q-Del	9q-Del	0.991	1
13q-Del	Amp_12q14.1	0.991	1
15q-Del	3p-Del	0.991	1
15q-Del	Del_16q24.3	0.991	1
17p-Del	Del_4q34.3	0.991	1
18q-Del	Del_9q21.11	0.991	1
19p-Del	3q-Del	0.991	1
19p-Del	Del_14q32.33	0.991	1
19q-Del	Amp_22q11.22	0.991	1
19q-Del	Del_6q14.3	0.991	1
21q-Del	Del_6q14.3	0.991	1
3p-Del	Del_11p15.5	0.991	1
3p-Del	Del_12p13.2	0.991	1
3p-Del	Del_18q21.32	0.991	1
3q-Del	Del_6q26	0.991	1
3q-Del	Del_18q21.32	0.991	1
3q-Del	Del_18q23	0.991	1
6q-Del	Del_3q29	0.991	1
9p-Del	Del_12q12	0.991	1
9q-Del	Del_12p13.2	0.991	1
9q-Del	Del_15q15.1	0.991	1
Amp_1p34.3	Del_3q11.1	0.991	1
Amp_1q21.3	Del_11q25	0.991	1
Amp_5p15.33	Amp_7q31.2	0.991	1
Amp_5p15.33	Amp_22q11.22	0.991	1
Amp_5p15.33	Del_5q12.1	0.991	1
Amp_5p13.1	Del_17p13.3	0.991	1
Amp_10p15.1	Del_21q11.2	0.991	1
Amp_11q13.3	Amp_12q15	0.991	1
Amp_12q14.1	Del_18q21.32	0.991	1
Amp_12q15	Del_16q23.1	0.991	1
Amp_22q11.22	Del_10p15.3	0.991	1
Del_1p13.1	Del_Xp22.2	0.991	1
Del_3p26.2	Del_19p13.2	0.991	1
Del_3q29	Del_13q12.11	0.991	1
Del_6q26	Del_9p23	0.991	1
Del_10q26.3	Del_21q11.2	0.991	1
Del_12q24.33	Del_14q32.33	0.991	1
ACVR1B	FTSJD1	0.992	1
ACVR1B	G3BP1	0.992	1
ADAMTS19	5p-Amp	0.992	1
ARID1A	TGFBR3	0.992	1
ARID2	Del_12q12	0.992	1
BRAF	Del_8p23.2	0.992	1
CSMD3	Del_4q34.3	0.992	1
CTNNB1	Amp_10p15.1	0.992	1
EMG1	TGFBR3	0.992	1
EPHA3	ROBO2	0.992	1
EPHA3	Amp_22q11.22	0.992	1
EPHB1	OR2L13	0.992	1
FAM65C	STK19	0.992	1
G3BP1	Del_12p13.2	0.992	1
GNAS	NLRP5	0.992	1
GNAS	Del_16q24.3	0.992	1
KCNQ5	RIT1	0.992	1
KEAP1	Del_6q14.3	0.992	1
MET	7p-Amp	0.992	1
MET	Amp_12q14.1	0.992	1
MMP16	Amp_1q21.3	0.992	1
MMP16	Del_Xp22.2	0.992	1
NLGN4X	TTN	0.992	1
NLRP5	ZEB1	0.992	1
NLRP5	7p-Amp	0.992	1
NLRP6	Amp_10p15.1	0.992	1
NLRP6	Del_10q26.3	0.992	1
NUDT11	6q-Del	0.992	1
OR2L13	PRKCG	0.992	1
PDGFRA	Amp_5p13.1	0.992	1
PHKA1	15q-Del	0.992	1
PHKA1	Del_5q12.1	0.992	1
PPP3CA	TRERF1	0.992	1
PTPRU	SLAMF9	0.992	1
RB1	Del_5q12.1	0.992	1
RIT1	13q-Del	0.992	1
RIT1	Del_12q12	0.992	1
ROBO2	Amp_4q12	0.992	1
RPL5	Del_12q12	0.992	1
SIP1	SLC4A3	0.992	1
SIP1	SMAD4	0.992	1
SIP1	Del_11p15.5	0.992	1
SIP1	Del_18q23	0.992	1
SLAMF9	Amp_19q12	0.992	1
SLC4A3	5p-Amp	0.992	1
SRPX	Del_21q11.2	0.992	1
STK19	WT1	0.992	1
STK19	Amp_12p12.1	0.992	1
STRA8	ZNF608	0.992	1
STRA8	13q-Del	0.992	1
TGFBR3	Del_3p26.2	0.992	1
TP53	7q-Amp	0.992	1
TP53	Amp_6p21.1	0.992	1
TP53	Del_4q34.3	0.992	1
TP53	Del_22q13.32	0.992	1
WT1	Amp_Xq28	0.992	1
17q-Amp	1q-Amp	0.992	1
1q-Amp	Amp_17q12	0.992	1
20q-Amp	7p-Amp	0.992	1
20q-Amp	Amp_12q14.1	0.992	1
7p-Amp	Del_8p23.2	0.992	1
7q-Amp	Amp_5p13.1	0.992	1
13q-Del	Del_Xp22.2	0.992	1
15q-Del	Del_Xp22.2	0.992	1
17p-Del	Del_18q21.32	0.992	1
18p-Del	Amp_7q31.2	0.992	1
18p-Del	Del_3p21.31	0.992	1
18q-Del	Del_4q22.1	0.992	1
18q-Del	Del_4q34.3	0.992	1
19q-Del	6q-Del	0.992	1
3p-Del	Del_6q26	0.992	1
3p-Del	Del_12q12	0.992	1
3p-Del	Del_22q13.32	0.992	1
5q-Del	Del_3q29	0.992	1
6q-Del	Del_4q22.1	0.992	1
8p-Del	Del_Xp22.2	0.992	1
9q-Del	Amp_12q15	0.992	1
9q-Del	Del_18q21.32	0.992	1
Amp_1q21.3	Del_5q31.1	0.992	1
Amp_1q21.3	Del_13q34	0.992	1
Amp_7p11.2	Del_8p23.2	0.992	1
Amp_7p11.2	Del_16q23.1	0.992	1
Amp_8p11.21	Del_21q11.2	0.992	1
Amp_10p15.1	Del_6q14.3	0.992	1
Amp_12p12.1	Amp_17q12	0.992	1
Amp_12q14.1	Del_18q23	0.992	1
Amp_14q13.3	Amp_20q13.33	0.992	1
Amp_14q13.3	Del_10p15.3	0.992	1
Amp_14q13.3	Del_13q12.11	0.992	1
Amp_19q12	Del_11q25	0.992	1
Amp_22q11.22	Del_9p23	0.992	1
Del_4q34.3	Del_9p23	0.992	1
Del_5q12.1	Del_13q34	0.992	1
Del_6q14.3	Del_10q26.3	0.992	1
Del_10q26.3	Del_12q24.33	0.992	1
Del_11p15.5	Del_14q32.33	0.992	1
Del_12p13.2	Del_13q34	0.992	1
Del_15q11.2	Del_18q21.32	0.992	1
ABCB1	ADAMTS19	0.993	1
ADAMTS19	WDR66	0.993	1
ADAMTS19	Amp_10p15.1	0.993	1
CDKN2A	TTN	0.993	1
CTNNB1	6q-Del	0.993	1
CXCR7	20q-Amp	0.993	1
EPHA3	EPHA5	0.993	1
EPHA5	GNAS	0.993	1
EPHA5	U2AF1	0.993	1
FCRLA	TP53	0.993	1
FCRLA	WT1	0.993	1
G3BP1	OR2L13	0.993	1
G3BP1	Del_10p15.3	0.993	1
GAGE2A	RIT1	0.993	1
GNAS	LRP1B	0.993	1
GNAS	Del_9p21.3	0.993	1
KCNQ5	Del_11q23.1	0.993	1
KEAP1	Del_6q26	0.993	1
MAP2	TP53	0.993	1
MAP2	Amp_8p11.21	0.993	1
MGA	Amp_Xq28	0.993	1
MMP16	TP53	0.993	1
MMP16	Del_15q15.1	0.993	1
NLRP5	Amp_5p15.33	0.993	1
NLRP5	Amp_12p12.1	0.993	1
OR2L13	STRA8	0.993	1
OR2L13	3p-Del	0.993	1
OR2L13	Del_6q14.3	0.993	1
PHKA1	Del_16q23.1	0.993	1
PTPRU	TP53	0.993	1
PTPRU	Del_5q12.1	0.993	1
PTPRU	Del_22q13.32	0.993	1
RPL5	Del_11q25	0.993	1
SIP1	1q-Amp	0.993	1
SIP1	Del_1p36.13	0.993	1
SLC4A3	Del_5q12.1	0.993	1
SLC4A3	Del_10q26.3	0.993	1
STIM1	Del_Xp22.2	0.993	1
STK11	ZNF608	0.993	1
STK11	Del_19p13.2	0.993	1
STK19	Amp_13q33.3	0.993	1
STRA8	22q-Del	0.993	1
TGFBR3	19p-Del	0.993	1
TP53	TPTE	0.993	1
TP53	20q-Amp	0.993	1
TP53	Amp_12p12.1	0.993	1
TP53	Del_5q12.1	0.993	1
TPTE	5p-Amp	0.993	1
TTN	20p-Amp	0.993	1
WDR66	Amp_5p13.1	0.993	1
WT1	Amp_4q12	0.993	1
1p-Amp	20q-Amp	0.993	1
1p-Amp	5q-Del	0.993	1
20q-Amp	Del_13q34	0.993	1
5p-Amp	8p-Del	0.993	1
8q-Amp	Del_Xp22.2	0.993	1
15q-Del	Amp_8q24.21	0.993	1
15q-Del	Del_19p13.3	0.993	1
17p-Del	18q-Del	0.993	1
18p-Del	3p-Del	0.993	1
18p-Del	Del_6q14.3	0.993	1
18p-Del	Del_16q23.1	0.993	1
19q-Del	3q-Del	0.993	1
21q-Del	3q-Del	0.993	1
21q-Del	Del_3q11.1	0.993	1
22q-Del	Del_14q32.33	0.993	1
3q-Del	Del_13q34	0.993	1
5q-Del	Amp_Xq28	0.993	1
8p-Del	Del_4q22.1	0.993	1
Amp_4q12	Amp_8p11.21	0.993	1
Amp_4q12	Del_10p15.3	0.993	1
Amp_6p21.1	Amp_18q11.2	0.993	1
Amp_8q24.21	Del_22q13.32	0.993	1
Amp_11q13.3	Amp_14q13.3	0.993	1
Amp_12p12.1	Del_18q21.32	0.993	1
Amp_13q33.3	Amp_22q11.22	0.993	1
Amp_13q33.3	Del_22q13.32	0.993	1
Amp_17q23.1	Amp_Xq28	0.993	1
Amp_19q12	Del_11p15.5	0.993	1
Del_1p36.13	Del_5q31.1	0.993	1
Del_1p36.13	Del_15q11.2	0.993	1
Del_1p36.13	Del_16q24.3	0.993	1
Del_4q34.3	Del_12p13.2	0.993	1
Del_9p23	Del_10p15.3	0.993	1
Del_9q21.11	Del_14q32.33	0.993	1
Del_10p15.3	Del_13q34	0.993	1
Del_10p15.3	Del_14q32.33	0.993	1
Del_10p15.3	Del_Xp22.2	0.993	1
Del_11q23.1	Del_12q12	0.993	1
Del_12p13.2	Del_18q23	0.993	1
Del_12q12	Del_14q32.33	0.993	1
Del_12q12	Del_Xp22.2	0.993	1
ADAMTS19	SETD2	0.994	1
ARID1A	Amp_13q33.3	0.994	1
ARID2	GNAS	0.994	1
ARID2	PRKCG	0.994	1
ATM	STK19	0.994	1
BRAF	TPTE	0.994	1
BRAF	Del_5q31.1	0.994	1
CACNA1F	LRP1B	0.994	1
CDKN2A	SMARCA4	0.994	1
CSMD3	8q-Amp	0.994	1
DNMT3A	TTN	0.994	1
EPHA3	MET	0.994	1
ERBB2	SLC4A3	0.994	1
ERBB2	SMAD4	0.994	1
FTSJD1	Amp_22q11.22	0.994	1
KEAP1	Del_1p13.1	0.994	1
LRP1B	NLGN4X	0.994	1
LRP1B	PAPPA2	0.994	1
MAP2	NLRP6	0.994	1
MGA	Del_5q31.1	0.994	1
MGA	Del_10q26.3	0.994	1
MMP16	5p-Amp	0.994	1
NLGN4X	STK19	0.994	1
NLRP6	Amp_17q23.1	0.994	1
NRAS	PAPPA2	0.994	1
NRAS	Del_Xp22.2	0.994	1
OR2L13	3q-Del	0.994	1
PDGFRA	5p-Amp	0.994	1
PDGFRA	Del_2q22.1	0.994	1
PHKA1	STK19	0.994	1
PPP3CA	Amp_22q11.22	0.994	1
PRKCG	SMARCA4	0.994	1
PTPRU	Del_18q21.32	0.994	1
RPL5	Del_19p13.3	0.994	1
SIP1	17q-Amp	0.994	1
SLAMF9	STK19	0.994	1
SLC4A3	Del_18q21.32	0.994	1
STIM1	Del_10q26.3	0.994	1
STK19	Del_13q34	0.994	1
TCEAL5	Amp_1p34.3	0.994	1
TGFBR3	WDR66	0.994	1
TGFBR3	19q-Del	0.994	1
TGFBR3	Del_4q22.1	0.994	1
TP53	Amp_Xq28	0.994	1
TPTE	7p-Amp	0.994	1
TTN	Amp_3q26.2	0.994	1
U2AF1	Del_11p15.5	0.994	1
WDR66	Del_4q22.1	0.994	1
17q-Amp	Del_9q21.11	0.994	1
1p-Amp	8q-Amp	0.994	1
1q-Amp	7p-Amp	0.994	1
1q-Amp	3q-Del	0.994	1
20p-Amp	Del_2q22.1	0.994	1
20q-Amp	Del_11p15.5	0.994	1
5p-Amp	7q-Amp	0.994	1
7q-Amp	8q-Amp	0.994	1
8q-Amp	15q-Del	0.994	1
8q-Amp	Amp_14q13.3	0.994	1
8q-Amp	Del_15q15.1	0.994	1
13q-Del	Del_10q26.3	0.994	1
15q-Del	5q-Del	0.994	1
15q-Del	8p-Del	0.994	1
15q-Del	Del_16q23.1	0.994	1
18p-Del	3q-Del	0.994	1
18p-Del	9q-Del	0.994	1
18q-Del	Amp_12q14.1	0.994	1
18q-Del	Del_5q31.1	0.994	1
18q-Del	Del_16q24.3	0.994	1
19p-Del	Del_3p26.2	0.994	1
19q-Del	Amp_6p21.1	0.994	1
19q-Del	Del_12p13.2	0.994	1
21q-Del	Del_4q22.1	0.994	1
21q-Del	Del_10p15.3	0.994	1
22q-Del	Del_18q21.32	0.994	1
3q-Del	Amp_1q21.3	0.994	1
3q-Del	Del_11q25	0.994	1
9q-Del	Del_11q25	0.994	1
Amp_1p34.3	Amp_1q21.3	0.994	1
Amp_1p34.3	Amp_13q33.3	0.994	1
Amp_3q26.2	Amp_8p11.21	0.994	1
Amp_3q26.2	Del_5q31.1	0.994	1
Amp_3q26.2	Del_10q26.3	0.994	1
Amp_3q26.2	Del_15q15.1	0.994	1
Amp_4q12	Amp_13q33.3	0.994	1
Amp_4q12	Amp_18q11.2	0.994	1
Amp_4q12	Del_11q25	0.994	1
Amp_5p15.33	Amp_11q13.3	0.994	1
Amp_8p11.21	Amp_12q15	0.994	1
Amp_8p11.21	Amp_17q23.1	0.994	1
Amp_8q24.21	Del_11q25	0.994	1
Amp_12p12.1	Del_9p23	0.994	1
Amp_12p12.1	Del_18q23	0.994	1
Amp_12q14.1	Del_9p23	0.994	1
Amp_12q15	Del_9q21.11	0.994	1
Amp_13q33.3	Del_3p26.2	0.994	1
Amp_17q23.1	Amp_22q11.22	0.994	1
Amp_17q23.1	Del_5q31.1	0.994	1
Amp_19q12	Del_19p13.2	0.994	1
Amp_20q13.33	Del_21q11.2	0.994	1
Del_1p36.13	Del_14q32.33	0.994	1
Del_2q22.1	Del_4q34.3	0.994	1
Del_3q29	Del_12q24.33	0.994	1
Del_3q29	Del_21q11.2	0.994	1
Del_4q22.1	Del_6q26	0.994	1
Del_4q22.1	Del_18q23	0.994	1
Del_4q34.3	Del_10p15.3	0.994	1
Del_6q26	Del_14q32.33	0.994	1
Del_8p23.2	Del_12p13.2	0.994	1
Del_9q21.11	Del_12q24.33	0.994	1
Del_10q26.3	Del_12p13.2	0.994	1
Del_10q26.3	Del_12q12	0.994	1
Del_11q23.1	Del_15q11.2	0.994	1
Del_11q23.1	Del_18q23	0.994	1
Del_12p13.2	Del_19p13.2	0.994	1
Del_12q24.33	Del_18q21.32	0.994	1
Del_14q32.33	Del_22q13.32	0.994	1
Del_15q11.2	Del_Xp22.2	0.994	1
Del_16q23.1	Del_19p13.3	0.994	1
Del_18q23	Del_Xp22.2	0.994	1
Del_22q13.32	Del_Xp22.2	0.994	1
ABCB1	STK19	0.995	1
ABCB1	Del_3q11.1	0.995	1
APC	TRERF1	0.995	1
ARID1A	6q-Del	0.995	1
ARID2	EPHB1	0.995	1
ARID2	RPL5	0.995	1
ATM	WT1	0.995	1
ATM	Del_11q25	0.995	1
BRAF	PIK3CA	0.995	1
CACNA1F	Del_10q26.3	0.995	1
CSMD3	NLRP5	0.995	1
CSMD3	PRKCG	0.995	1
CSMD3	TRERF1	0.995	1
CTNNB1	Amp_14q13.3	0.995	1
EGFR	Del_9p21.3	0.995	1
EPHA3	TP53	0.995	1
EPHB1	FTSJD1	0.995	1
EPHB1	MMP16	0.995	1
FAM65C	NLGN4X	0.995	1
FAM65C	TCEAL5	0.995	1
FAM65C	Amp_18q11.2	0.995	1
FCRLA	Del_8p23.2	0.995	1
FTSJD1	Del_8p23.2	0.995	1
GNAS	9q-Del	0.995	1
GNAS	Del_Xp22.2	0.995	1
KRAS	Del_1p13.1	0.995	1
LRP1B	PTPRU	0.995	1
LRP1B	SLAMF9	0.995	1
LRP1B	TGFBR3	0.995	1
LRP1B	WT1	0.995	1
LRP1B	Amp_5p15.33	0.995	1
MMP16	STK19	0.995	1
MMP16	Del_5q12.1	0.995	1
NRAS	5q-Del	0.995	1
OR2L13	SRPX	0.995	1
OR2L13	TGFBR3	0.995	1
OR2L13	Del_4q22.1	0.995	1
OR2L13	Del_4q34.3	0.995	1
PAPPA2	STK19	0.995	1
PDGFRA	Del_16q23.1	0.995	1
PHKA1	TP53	0.995	1
PPP3CA	Del_19p13.3	0.995	1
PTPRU	Del_18q23	0.995	1
RB1	Del_4q22.1	0.995	1
RPL5	9p-Del	0.995	1
RPL5	Del_11q23.1	0.995	1
SIP1	WT1	0.995	1
SIP1	Amp_4q12	0.995	1
SIP1	Del_3q11.1	0.995	1
SLAMF9	TP53	0.995	1
SLAMF9	Amp_4q12	0.995	1
SLAMF9	Amp_17q12	0.995	1
SLAMF9	Del_3q11.1	0.995	1
SLC4A3	Del_18q23	0.995	1
SMAD4	Del_3q29	0.995	1
STK11	3q-Del	0.995	1
STK11	Amp_8q24.21	0.995	1
STK11	Del_3q11.1	0.995	1
TRERF1	Amp_12p12.1	0.995	1
U2AF1	Del_1p36.13	0.995	1
1p-Amp	17p-Del	0.995	1
1p-Amp	Amp_14q13.3	0.995	1
1p-Amp	Del_5q31.1	0.995	1
1q-Amp	19p-Del	0.995	1
20p-Amp	Del_15q15.1	0.995	1
20p-Amp	Del_16q24.3	0.995	1
20q-Amp	Del_12p13.2	0.995	1
7q-Amp	Amp_11q13.3	0.995	1
13q-Del	Del_21q11.2	0.995	1
13q-Del	Del_22q13.32	0.995	1
15q-Del	Amp_12p12.1	0.995	1
15q-Del	Del_6q26	0.995	1
18q-Del	3p-Del	0.995	1
19p-Del	Del_15q11.2	0.995	1
21q-Del	Del_13q12.11	0.995	1
22q-Del	Del_10q26.3	0.995	1
3p-Del	6q-Del	0.995	1
5q-Del	Del_12p13.2	0.995	1
5q-Del	Del_12q12	0.995	1
9p-Del	Del_12p13.2	0.995	1
9q-Del	Amp_8p11.21	0.995	1
Amp_1p34.3	Amp_3q26.2	0.995	1
Amp_1q21.3	Amp_Xq28	0.995	1
Amp_4q12	Del_9q21.11	0.995	1
Amp_5p13.1	Amp_22q11.22	0.995	1
Amp_7p11.2	Del_16q24.3	0.995	1
Amp_10p15.1	Del_6q26	0.995	1
Amp_11q13.3	Del_22q13.32	0.995	1
Amp_12p12.1	Del_11q23.1	0.995	1
Amp_12q14.1	Amp_14q13.3	0.995	1
Amp_12q14.1	Del_9q21.11	0.995	1
Amp_17q23.1	Del_19p13.3	0.995	1
Amp_18q11.2	Del_13q34	0.995	1
Amp_18q11.2	Del_14q32.33	0.995	1
Amp_22q11.22	Del_16q24.3	0.995	1
Amp_Xq28	Del_5q31.1	0.995	1
Del_1p36.13	Del_5q12.1	0.995	1
Del_1p36.13	Del_10q26.3	0.995	1
Del_1p36.13	Del_22q13.32	0.995	1
Del_2q22.1	Del_19p13.3	0.995	1
Del_3p26.2	Del_12p13.2	0.995	1
Del_4q34.3	Del_13q34	0.995	1
Del_5q31.1	Del_12q24.33	0.995	1
Del_5q31.1	Del_Xp22.2	0.995	1
Del_6q26	Del_10q26.3	0.995	1
Del_9p23	Del_11q25	0.995	1
Del_10q26.3	Del_15q11.2	0.995	1
Del_10q26.3	Del_18q23	0.995	1
Del_10q26.3	Del_19p13.3	0.995	1
Del_12q24.33	Del_18q23	0.995	1
Del_15q15.1	Del_Xp22.2	0.995	1
Del_16q24.3	Del_18q23	0.995	1
ABCB1	FAM65C	0.996	1
ABCB1	Del_3q29	0.996	1
ACVR1B	DNMT3A	0.996	1
ADAMTS19	PHKA1	0.996	1
ADAMTS19	Del_2q22.1	0.996	1
BRAF	CSMD3	0.996	1
BRAF	EMG1	0.996	1
BRAF	KCNQ5	0.996	1
CACNA1F	MMP16	0.996	1
CDKN2A	U2AF1	0.996	1
CDKN2A	Amp_10p15.1	0.996	1
CSMD3	EPHA3	0.996	1
CSMD3	GNAS	0.996	1
CSMD3	KCNQ5	0.996	1
CSMD3	STIM1	0.996	1
CSMD3	TGFBR3	0.996	1
CSMD3	Amp_17q23.1	0.996	1
CSMD3	Del_8p23.2	0.996	1
CTNNB1	NRAS	0.996	1
CTNNB1	Del_13q34	0.996	1
CXCR7	NUDT11	0.996	1
CXCR7	PAPPA2	0.996	1
DNMT3A	PAK1	0.996	1
DNMT3A	PAPPA2	0.996	1
DNMT3A	Del_12q12	0.996	1
EMG1	17p-Del	0.996	1
EPHA5	PTPRU	0.996	1
ERBB2	Del_3q11.1	0.996	1
FAM65C	GNAS	0.996	1
FAM65C	MAP2	0.996	1
FAM65C	TTN	0.996	1
FTSJD1	WDR66	0.996	1
G3BP1	Amp_10p15.1	0.996	1
GNAS	PDGFRA	0.996	1
GNAS	TTN	0.996	1
KRAS	RBM10	0.996	1
KRAS	1q-Amp	0.996	1
MAP2	8q-Amp	0.996	1
MET	RB1	0.996	1
MGA	Del_3p21.31	0.996	1
MMP16	WDR66	0.996	1
MMP16	WT1	0.996	1
NF1	Amp_4q12	0.996	1
NLRP5	Amp_4q12	0.996	1
NLRP5	Amp_12q14.1	0.996	1
NLRP6	Amp_8q24.21	0.996	1
OR2L13	STK11	0.996	1
OR2L13	Del_10q26.3	0.996	1
OR2L13	Del_19p13.2	0.996	1
OR2L13	Del_19q13.33	0.996	1
PAK1	Del_19p13.2	0.996	1
PDGFRA	PTPRU	0.996	1
PDGFRA	SLC4A3	0.996	1
PHKA1	WDR66	0.996	1
PHKA1	Amp_Xq28	0.996	1
PPP3CA	21q-Del	0.996	1
PPP3CA	Del_1p13.1	0.996	1
PRKCG	Amp_7q31.2	0.996	1
PRKCG	Del_3p21.31	0.996	1
RB1	20q-Amp	0.996	1
RB1	Del_10q26.3	0.996	1
ROBO2	Amp_17q12	0.996	1
RPL5	Del_9p23	0.996	1
SIP1	Amp_12p12.1	0.996	1
SLAMF9	WDR66	0.996	1
SLAMF9	Amp_Xq28	0.996	1
STK19	Del_5q31.1	0.996	1
STK19	Del_15q11.2	0.996	1
STRA8	20q-Amp	0.996	1
STRA8	Del_9p23	0.996	1
TGFBR3	Del_2q22.1	0.996	1
TP53	Amp_22q11.22	0.996	1
TTN	WT1	0.996	1
TTN	8q-Amp	0.996	1
U2AF1	17q-Amp	0.996	1
WDR66	Amp_8p11.21	0.996	1
WDR66	Del_2q22.1	0.996	1
1p-Amp	Amp_7q31.2	0.996	1
1p-Amp	Amp_8q24.21	0.996	1
1q-Amp	Del_12q24.33	0.996	1
1q-Amp	Del_22q13.32	0.996	1
20p-Amp	Amp_19q12	0.996	1
20p-Amp	Del_5q12.1	0.996	1
20q-Amp	Amp_18q11.2	0.996	1
20q-Amp	Amp_22q11.22	0.996	1
5p-Amp	Del_12q24.33	0.996	1
7q-Amp	Amp_8p11.21	0.996	1
7q-Amp	Del_17p13.3	0.996	1
13q-Del	Amp_12p12.1	0.996	1
13q-Del	Del_15q11.2	0.996	1
15q-Del	Del_9p23	0.996	1
17p-Del	3q-Del	0.996	1
17p-Del	Del_12p13.2	0.996	1
18p-Del	Del_10q26.3	0.996	1
18q-Del	Del_1p36.13	0.996	1
18q-Del	Del_5q12.1	0.996	1
19p-Del	6q-Del	0.996	1
19p-Del	Del_15q15.1	0.996	1
21q-Del	3p-Del	0.996	1
21q-Del	Amp_8p11.21	0.996	1
22q-Del	Del_3p26.2	0.996	1
3p-Del	Del_14q32.33	0.996	1
3p-Del	Del_16q23.1	0.996	1
3q-Del	Del_5q31.1	0.996	1
3q-Del	Del_14q32.33	0.996	1
5q-Del	8p-Del	0.996	1
5q-Del	Amp_3q26.2	0.996	1
5q-Del	Amp_22q11.22	0.996	1
5q-Del	Del_18q21.32	0.996	1
6q-Del	Del_11q23.1	0.996	1
6q-Del	Del_14q32.33	0.996	1
6q-Del	Del_19p13.2	0.996	1
8p-Del	Amp_19q12	0.996	1
8p-Del	Del_12q12	0.996	1
9p-Del	Amp_17q23.1	0.996	1
Amp_1q21.3	Amp_7q31.2	0.996	1
Amp_3q26.2	Amp_14q13.3	0.996	1
Amp_4q12	Del_Xp22.2	0.996	1
Amp_5p15.33	Amp_8q24.21	0.996	1
Amp_5p15.33	Del_15q11.2	0.996	1
Amp_6p21.1	Amp_7p11.2	0.996	1
Amp_8p11.21	Del_4q34.3	0.996	1
Amp_8p11.21	Del_10p15.3	0.996	1
Amp_8p11.21	Del_11p15.5	0.996	1
Amp_10p15.1	Amp_22q11.22	0.996	1
Amp_10p15.1	Del_5q31.1	0.996	1
Amp_10p15.1	Del_16q24.3	0.996	1
Amp_11q13.3	Amp_17q23.1	0.996	1
Amp_11q13.3	Amp_20q13.33	0.996	1
Amp_12p12.1	Del_1p36.13	0.996	1
Amp_12q15	Del_21q11.2	0.996	1
Amp_17q12	Del_5q12.1	0.996	1
Amp_17q23.1	Amp_19q12	0.996	1
Amp_18q11.2	Del_18q21.32	0.996	1
Amp_19q12	Del_15q11.2	0.996	1
Amp_19q12	Del_19q13.33	0.996	1
Amp_22q11.22	Del_5q12.1	0.996	1
Amp_22q11.22	Del_10q26.3	0.996	1
Amp_22q11.22	Del_19p13.3	0.996	1
Amp_Xq28	Del_2q22.1	0.996	1
Amp_Xq28	Del_8p23.2	0.996	1
Amp_Xq28	Del_18q21.32	0.996	1
Del_1p36.13	Del_18q21.32	0.996	1
Del_1p36.13	Del_18q23	0.996	1
Del_3p21.31	Del_9p21.3	0.996	1
Del_3p21.31	Del_12q24.33	0.996	1
Del_3p21.31	Del_14q32.33	0.996	1
Del_3p21.31	Del_18q21.32	0.996	1
Del_3p21.31	Del_Xp22.2	0.996	1
Del_3q11.1	Del_5q31.1	0.996	1
Del_5q12.1	Del_11q23.1	0.996	1
Del_5q12.1	Del_14q32.33	0.996	1
Del_9p21.3	Del_11p15.5	0.996	1
Del_9q21.11	Del_10p15.3	0.996	1
Del_9q21.11	Del_12q12	0.996	1
Del_10p15.3	Del_19p13.3	0.996	1
Del_10q26.3	Del_17p13.3	0.996	1
Del_11p15.5	Del_19q13.33	0.996	1
Del_11q25	Del_18q23	0.996	1
Del_12q12	Del_19p13.2	0.996	1
Del_18q23	Del_19p13.2	0.996	1
ABCB1	Amp_3q26.2	0.997	1
ADAMTS19	TP53	0.997	1
APC	CACNA1F	0.997	1
APC	RPL5	0.997	1
APC	STRA8	0.997	1
APC	Amp_3q26.2	0.997	1
ARID1A	GNAS	0.997	1
ARID2	NF1	0.997	1
ARID2	NLGN4X	0.997	1
ATM	STK11	0.997	1
ATM	Del_15q11.2	0.997	1
BRAF	OR2L13	0.997	1
CACNA1F	EPHA5	0.997	1
CSMD3	5p-Amp	0.997	1
CSMD3	Amp_5p15.33	0.997	1
CTNNB1	Del_6q14.3	0.997	1
CXCR7	FCRLA	0.997	1
CXCR7	PDGFRA	0.997	1
CXCR7	20p-Amp	0.997	1
EGFR	Del_8p23.2	0.997	1
EMG1	STIM1	0.997	1
EPHA3	NFE2L2	0.997	1
EPHA5	ZEB1	0.997	1
EPHA5	Amp_13q33.3	0.997	1
EPHA5	Del_10q26.3	0.997	1
EPHB1	Amp_5p13.1	0.997	1
FTSJD1	NFE2L2	0.997	1
FTSJD1	PDGFRA	0.997	1
FTSJD1	Amp_10p15.1	0.997	1
FTSJD1	Amp_14q13.3	0.997	1
GAGE2A	ROBO2	0.997	1
KCNQ5	Del_11p15.5	0.997	1
KRAS	NUDT11	0.997	1
LRP1B	MGA	0.997	1
LRP1B	PDGFRA	0.997	1
LRP1B	ZEB1	0.997	1
LRP1B	Amp_5p13.1	0.997	1
MAP2	PAPPA2	0.997	1
MMP16	Del_4q34.3	0.997	1
NF1	8q-Amp	0.997	1
NF1	Amp_5p13.1	0.997	1
NLRP6	17q-Amp	0.997	1
NLRP6	Del_4q34.3	0.997	1
NRAS	Amp_4q12	0.997	1
NRAS	Amp_22q11.22	0.997	1
PAPPA2	ZEB1	0.997	1
PAPPA2	Del_4q34.3	0.997	1
PPP3CA	Amp_6p21.1	0.997	1
PPP3CA	Del_11q25	0.997	1
PTPRU	Del_1p13.1	0.997	1
PTPRU	Del_11p15.5	0.997	1
PTPRU	Del_13q34	0.997	1
RB1	Amp_7p11.2	0.997	1
ROBO2	Del_11p15.5	0.997	1
SIP1	U2AF1	0.997	1
SIP1	18q-Del	0.997	1
SLC4A3	STIM1	0.997	1
SLC4A3	Del_12q12	0.997	1
SMARCA4	TTN	0.997	1
STIM1	STK19	0.997	1
STIM1	TP53	0.997	1
STIM1	Del_5q31.1	0.997	1
STK11	8q-Amp	0.997	1
STK11	19p-Del	0.997	1
STK11	Del_19p13.3	0.997	1
STK19	Amp_5p15.33	0.997	1
STK19	Del_3p21.31	0.997	1
STK19	Del_5q12.1	0.997	1
STRA8	TTN	0.997	1
TGFBR3	Amp_17q23.1	0.997	1
TP53	8p-Del	0.997	1
TP53	Amp_13q33.3	0.997	1
TPTE	Amp_7p11.2	0.997	1
TTN	Amp_12p12.1	0.997	1
TTN	Del_12p13.2	0.997	1
WDR66	Amp_10p15.1	0.997	1
WDR66	Amp_17q23.1	0.997	1
WDR66	Amp_20q13.33	0.997	1
WDR66	Del_5q31.1	0.997	1
WDR66	Del_14q32.33	0.997	1
WDR66	Del_15q15.1	0.997	1
WT1	Del_Xp22.2	0.997	1
17q-Amp	5p-Amp	0.997	1
17q-Amp	8q-Amp	0.997	1
17q-Amp	Amp_1q21.3	0.997	1
1p-Amp	7p-Amp	0.997	1
1p-Amp	3q-Del	0.997	1
1q-Amp	7q-Amp	0.997	1
1q-Amp	Del_10p15.3	0.997	1
20p-Amp	Del_16q23.1	0.997	1
20q-Amp	9p-Del	0.997	1
20q-Amp	Amp_4q12	0.997	1
5p-Amp	7p-Amp	0.997	1
5p-Amp	Amp_14q13.3	0.997	1
7p-Amp	Amp_8p11.21	0.997	1
8q-Amp	Amp_5p13.1	0.997	1
8q-Amp	Amp_22q11.22	0.997	1
13q-Del	Del_15q15.1	0.997	1
15q-Del	19p-Del	0.997	1
15q-Del	Amp_20q13.33	0.997	1
15q-Del	Del_3p26.2	0.997	1
17p-Del	Del_4q22.1	0.997	1
17p-Del	Del_22q13.32	0.997	1
18q-Del	9q-Del	0.997	1
18q-Del	Del_6q14.3	0.997	1
18q-Del	Del_10q26.3	0.997	1
19p-Del	8p-Del	0.997	1
19p-Del	Del_11q25	0.997	1
19q-Del	Del_15q11.2	0.997	1
19q-Del	Del_15q15.1	0.997	1
21q-Del	Amp_20q13.33	0.997	1
21q-Del	Del_8p23.2	0.997	1
21q-Del	Del_9q21.11	0.997	1
21q-Del	Del_15q11.2	0.997	1
22q-Del	6q-Del	0.997	1
22q-Del	Del_2q22.1	0.997	1
3q-Del	Del_10q26.3	0.997	1
3q-Del	Del_12q24.33	0.997	1
5q-Del	Amp_4q12	0.997	1
5q-Del	Del_6q26	0.997	1
5q-Del	Del_13q12.11	0.997	1
6q-Del	Del_10p15.3	0.997	1
8p-Del	Amp_12p12.1	0.997	1
8p-Del	Del_1p13.1	0.997	1
9q-Del	Amp_17q12	0.997	1
9q-Del	Amp_17q23.1	0.997	1
9q-Del	Del_12q24.33	0.997	1
9q-Del	Del_21q11.2	0.997	1
Amp_1q21.3	Amp_11q13.3	0.997	1
Amp_4q12	Amp_10p15.1	0.997	1
Amp_4q12	Del_9p21.3	0.997	1
Amp_5p15.33	Amp_7p11.2	0.997	1
Amp_5p13.1	Del_4q34.3	0.997	1
Amp_5p13.1	Del_5q12.1	0.997	1
Amp_5p13.1	Del_15q11.2	0.997	1
Amp_7p11.2	Amp_10p15.1	0.997	1
Amp_7q31.2	Del_10q26.3	0.997	1
Amp_8p11.21	Amp_10p15.1	0.997	1
Amp_8p11.21	Amp_14q13.3	0.997	1
Amp_8p11.21	Amp_18q11.2	0.997	1
Amp_8q24.21	Del_21q11.2	0.997	1
Amp_10p15.1	Amp_11q13.3	0.997	1
Amp_10p15.1	Del_16q23.1	0.997	1
Amp_11q13.3	Amp_22q11.22	0.997	1
Amp_11q13.3	Del_21q11.2	0.997	1
Amp_12p12.1	Amp_17q23.1	0.997	1
Amp_12q14.1	Amp_20q13.33	0.997	1
Amp_12q14.1	Del_2q22.1	0.997	1
Amp_12q15	Del_2q22.1	0.997	1
Amp_12q15	Del_11q23.1	0.997	1
Amp_14q13.3	Del_15q11.2	0.997	1
Amp_14q13.3	Del_18q21.32	0.997	1
Amp_17q12	Del_1p36.13	0.997	1
Amp_17q23.1	Del_19p13.2	0.997	1
Amp_18q11.2	Del_2q22.1	0.997	1
Amp_19q12	Del_5q31.1	0.997	1
Amp_20q13.33	Del_15q11.2	0.997	1
Amp_22q11.22	Del_16q23.1	0.997	1
Amp_Xq28	Del_11p15.5	0.997	1
Amp_Xq28	Del_13q34	0.997	1
Del_1p36.13	Del_12q12	0.997	1
Del_1p36.13	Del_19q13.33	0.997	1
Del_1p13.1	Del_11p15.5	0.997	1
Del_1p13.1	Del_18q21.32	0.997	1
Del_2q22.1	Del_10p15.3	0.997	1
Del_3p26.2	Del_11p15.5	0.997	1
Del_3q11.1	Del_10q26.3	0.997	1
Del_3q11.1	Del_12q24.33	0.997	1
Del_3q11.1	Del_19p13.3	0.997	1
Del_3q29	Del_11q25	0.997	1
Del_3q29	Del_15q11.2	0.997	1
Del_5q12.1	Del_18q23	0.997	1
Del_5q31.1	Del_12p13.2	0.997	1
Del_6q26	Del_21q11.2	0.997	1
Del_9q21.11	Del_11q25	0.997	1
Del_10p15.3	Del_12p13.2	0.997	1
Del_10q26.3	Del_Xp22.2	0.997	1
Del_11q25	Del_21q11.2	0.997	1
Del_16q23.1	Del_18q21.32	0.997	1
Del_18q21.32	Del_22q13.32	0.997	1
ABCB1	PTPRU	0.998	1
ADAMTS19	TPTE	0.998	1
ARID1A	Del_17p13.3	0.998	1
ARID2	CSMD3	0.998	1
ARID2	TTN	0.998	1
ATM	SIP1	0.998	1
ATM	SLAMF9	0.998	1
ATM	1q-Amp	0.998	1
ATM	Amp_1q21.3	0.998	1
BRAF	G3BP1	0.998	1
CDKN2A	DNMT3A	0.998	1
CDKN2A	G3BP1	0.998	1
CSMD3	NLGN4X	0.998	1
CSMD3	Amp_5p13.1	0.998	1
CSMD3	Amp_Xq28	0.998	1
CXCR7	TPTE	0.998	1
EMG1	ZEB1	0.998	1
EPHA3	TRERF1	0.998	1
EPHA5	MMP16	0.998	1
EPHA5	PHKA1	0.998	1
EPHA5	PRKCG	0.998	1
EPHA5	STIM1	0.998	1
EPHA5	Amp_22q11.22	0.998	1
FTSJD1	MMP16	0.998	1
FTSJD1	PHKA1	0.998	1
FTSJD1	PPP3CA	0.998	1
FTSJD1	TTN	0.998	1
KCNQ5	PRKCG	0.998	1
KEAP1	19p-Del	0.998	1
LRP1B	MAP2	0.998	1
MAP2	TPTE	0.998	1
MGA	STRA8	0.998	1
MGA	Amp_17q23.1	0.998	1
MMP16	TPTE	0.998	1
MMP16	Del_5q31.1	0.998	1
NF1	TCEAL5	0.998	1
NF1	Del_Xp22.2	0.998	1
NLGN4X	TP53	0.998	1
NLRP5	Amp_5p13.1	0.998	1
NLRP6	WDR66	0.998	1
NLRP6	Del_21q11.2	0.998	1
NRAS	WT1	0.998	1
NRAS	7p-Amp	0.998	1
NRAS	Amp_13q33.3	0.998	1
NUDT11	Del_6q14.3	0.998	1
OR2L13	SLC4A3	0.998	1
OR2L13	Del_11p15.5	0.998	1
OR2L13	Del_15q11.2	0.998	1
OR2L13	Del_15q15.1	0.998	1
PAPPA2	STIM1	0.998	1
PHKA1	SLAMF9	0.998	1
PHKA1	5p-Amp	0.998	1
PHKA1	Del_18q21.32	0.998	1
PHKA1	Del_Xp22.2	0.998	1
PPP3CA	Del_11q23.1	0.998	1
PRKCG	PTPRU	0.998	1
PRKCG	SLC4A3	0.998	1
PTPRU	STRA8	0.998	1
PTPRU	Amp_5p15.33	0.998	1
RB1	7p-Amp	0.998	1
RB1	Amp_20q13.33	0.998	1
RB1	Del_5q31.1	0.998	1
RB1	Del_12p13.2	0.998	1
SIP1	17p-Del	0.998	1
SIP1	Del_16q24.3	0.998	1
SLAMF9	TTN	0.998	1
SLAMF9	Del_2q22.1	0.998	1
SLC4A3	STRA8	0.998	1
SLC4A3	20p-Amp	0.998	1
SRPX	Amp_11q13.3	0.998	1
STIM1	TGFBR3	0.998	1
STIM1	ZEB1	0.998	1
STIM1	Del_5q12.1	0.998	1
STK11	1q-Amp	0.998	1
STK11	Amp_20q13.33	0.998	1
STRA8	Del_5q31.1	0.998	1
TGFBR3	Amp_11q13.3	0.998	1
TP53	WDR66	0.998	1
TPTE	Del_8p23.2	0.998	1
TRERF1	Amp_3q26.2	0.998	1
TRERF1	Amp_22q11.22	0.998	1
TTN	ZEB1	0.998	1
TTN	Amp_5p15.33	0.998	1
TTN	Del_2q22.1	0.998	1
TTN	Del_11p15.5	0.998	1
WDR66	20q-Amp	0.998	1
WDR66	Del_22q13.32	0.998	1
17q-Amp	6q-Del	0.998	1
17q-Amp	Del_1p36.13	0.998	1
17q-Amp	Del_11p15.5	0.998	1
1q-Amp	6q-Del	0.998	1
20p-Amp	Amp_12q14.1	0.998	1
20q-Amp	9q-Del	0.998	1
20q-Amp	Amp_8p11.21	0.998	1
20q-Amp	Amp_12q15	0.998	1
20q-Amp	Amp_13q33.3	0.998	1
5p-Amp	8q-Amp	0.998	1
5p-Amp	Del_4q34.3	0.998	1
5p-Amp	Del_11p15.5	0.998	1
7q-Amp	Amp_5p15.33	0.998	1
13q-Del	15q-Del	0.998	1
13q-Del	3p-Del	0.998	1
13q-Del	Del_1p36.13	0.998	1
13q-Del	Del_9p21.3	0.998	1
15q-Del	Del_11q25	0.998	1
17p-Del	9q-Del	0.998	1
17p-Del	Del_11p15.5	0.998	1
18p-Del	6q-Del	0.998	1
18p-Del	Del_12p13.2	0.998	1
18q-Del	Del_11q25	0.998	1
18q-Del	Del_19q13.33	0.998	1
19p-Del	Amp_22q11.22	0.998	1
19q-Del	Del_9p21.3	0.998	1
19q-Del	Del_12q24.33	0.998	1
21q-Del	9p-Del	0.998	1
21q-Del	Del_3p21.31	0.998	1
3p-Del	5q-Del	0.998	1
3p-Del	9p-Del	0.998	1
3p-Del	Del_18q23	0.998	1
3p-Del	Del_19p13.3	0.998	1
3p-Del	Del_19p13.2	0.998	1
3p-Del	Del_21q11.2	0.998	1
6q-Del	Amp_17q12	0.998	1
6q-Del	Del_11q25	0.998	1
6q-Del	Del_15q11.2	0.998	1
6q-Del	Del_18q21.32	0.998	1
6q-Del	Del_19p13.3	0.998	1
8p-Del	Amp_4q12	0.998	1
8p-Del	Del_10p15.3	0.998	1
8p-Del	Del_15q15.1	0.998	1
9p-Del	Del_5q12.1	0.998	1
9p-Del	Del_12q24.33	0.998	1
9q-Del	Del_5q31.1	0.998	1
Amp_1q21.3	Amp_13q33.3	0.998	1
Amp_3q26.2	Amp_12q15	0.998	1
Amp_3q26.2	Amp_13q33.3	0.998	1
Amp_3q26.2	Del_15q11.2	0.998	1
Amp_4q12	Amp_11q13.3	0.998	1
Amp_5p13.1	Del_8p23.2	0.998	1
Amp_5p13.1	Del_14q32.33	0.998	1
Amp_5p13.1	Del_15q15.1	0.998	1
Amp_5p13.1	Del_22q13.32	0.998	1
Amp_6p21.1	Amp_14q13.3	0.998	1
Amp_6p21.1	Del_9q21.11	0.998	1
Amp_7p11.2	Amp_8q24.21	0.998	1
Amp_7p11.2	Amp_11q13.3	0.998	1
Amp_7q31.2	Amp_8p11.21	0.998	1
Amp_7q31.2	Amp_19q12	0.998	1
Amp_8p11.21	Amp_22q11.22	0.998	1
Amp_8p11.21	Del_9q21.11	0.998	1
Amp_8q24.21	Del_13q34	0.998	1
Amp_10p15.1	Amp_17q12	0.998	1
Amp_10p15.1	Del_13q34	0.998	1
Amp_11q13.3	Del_1p13.1	0.998	1
Amp_11q13.3	Del_3q29	0.998	1
Amp_11q13.3	Del_9p21.3	0.998	1
Amp_12p12.1	Del_22q13.32	0.998	1
Amp_12q14.1	Del_13q12.11	0.998	1
Amp_17q23.1	Del_9q21.11	0.998	1
Amp_19q12	Del_4q22.1	0.998	1
Amp_19q12	Del_8p23.2	0.998	1
Amp_19q12	Del_17p13.3	0.998	1
Amp_22q11.22	Amp_Xq28	0.998	1
Amp_22q11.22	Del_11p15.5	0.998	1
Amp_Xq28	Del_22q13.32	0.998	1
Del_1p36.13	Del_9p21.3	0.998	1
Del_1p36.13	Del_13q34	0.998	1
Del_1p13.1	Del_17p13.3	0.998	1
Del_3p26.2	Del_12q24.33	0.998	1
Del_3p26.2	Del_22q13.32	0.998	1
Del_3p21.31	Del_3q29	0.998	1
Del_3p21.31	Del_12q12	0.998	1
Del_3q29	Del_5q31.1	0.998	1
Del_3q29	Del_6q26	0.998	1
Del_4q34.3	Del_15q15.1	0.998	1
Del_4q34.3	Del_18q21.32	0.998	1
Del_5q12.1	Del_6q14.3	0.998	1
Del_5q12.1	Del_8p23.2	0.998	1
Del_5q12.1	Del_12p13.2	0.998	1
Del_5q31.1	Del_18q21.32	0.998	1
Del_6q14.3	Del_11p15.5	0.998	1
Del_6q14.3	Del_18q23	0.998	1
Del_6q26	Del_18q21.32	0.998	1
Del_6q26	Del_18q23	0.998	1
Del_8p23.2	Del_15q11.2	0.998	1
Del_8p23.2	Del_19q13.33	0.998	1
Del_9p23	Del_12q24.33	0.998	1
Del_9p23	Del_18q21.32	0.998	1
Del_9p21.3	Del_13q34	0.998	1
Del_9p21.3	Del_17p13.3	0.998	1
Del_9p21.3	Del_18q23	0.998	1
Del_9p21.3	Del_19q13.33	0.998	1
Del_9p21.3	Del_21q11.2	0.998	1
Del_9q21.11	Del_15q11.2	0.998	1
Del_10p15.3	Del_11p15.5	0.998	1
Del_11p15.5	Del_19p13.2	0.998	1
Del_11q23.1	Del_18q21.32	0.998	1
Del_12q24.33	Del_19p13.3	0.998	1
Del_12q24.33	Del_22q13.32	0.998	1
Del_13q12.11	Del_21q11.2	0.998	1
Del_13q34	Del_14q32.33	0.998	1
Del_19p13.2	Del_Xp22.2	0.998	1
Del_19q13.33	Del_21q11.2	0.998	1
Del_19q13.33	Del_Xp22.2	0.998	1
ABCB1	LRP1B	0.999	1
ACVR1B	CXCR7	0.999	1
ACVR1B	TPTE	0.999	1
ADAMTS19	CACNA1F	0.999	1
ADAMTS19	CSMD3	0.999	1
ADAMTS19	TTN	0.999	1
APC	NLGN4X	0.999	1
ARID1A	ZNF608	0.999	1
ARID1A	18q-Del	0.999	1
BRAF	SLAMF9	0.999	1
BRAF	Del_6q26	0.999	1
CACNA1F	EPHA3	0.999	1
CDKN2A	TGFBR3	0.999	1
CDKN2A	TP53	0.999	1
CSMD3	MMP16	0.999	1
CSMD3	PDGFRA	0.999	1
CSMD3	Amp_14q13.3	0.999	1
CSMD3	Del_Xp22.2	0.999	1
CTNNB1	Amp_1q21.3	0.999	1
CTNNB1	Amp_6p21.1	0.999	1
CTNNB1	Amp_13q33.3	0.999	1
EMG1	SIP1	0.999	1
EPHA3	PAPPA2	0.999	1
EPHA5	PAPPA2	0.999	1
EPHA5	PDGFRA	0.999	1
EPHA5	Del_15q11.2	0.999	1
EPHA5	Del_15q15.1	0.999	1
EPHB1	STRA8	0.999	1
FAM65C	G3BP1	0.999	1
FCRLA	TGFBR3	0.999	1
FTSJD1	TRERF1	0.999	1
FTSJD1	Del_16q23.1	0.999	1
GAGE2A	SIP1	0.999	1
GAGE2A	SRPX	0.999	1
GAGE2A	WT1	0.999	1
GNAS	STK19	0.999	1
GNAS	18q-Del	0.999	1
GNAS	Del_16q23.1	0.999	1
KCNQ5	NF1	0.999	1
KCNQ5	OR2L13	0.999	1
KEAP1	RIT1	0.999	1
KEAP1	Amp_6p21.1	0.999	1
KRAS	ZNF608	0.999	1
LRP1B	STIM1	0.999	1
LRP1B	Amp_1q21.3	0.999	1
MET	NUDT11	0.999	1
MGA	PRKCG	0.999	1
MGA	5q-Del	0.999	1
MGA	Amp_5p13.1	0.999	1
MMP16	OR2L13	0.999	1
MMP16	PDGFRA	0.999	1
MMP16	PRKCG	0.999	1
NF1	OR2L13	0.999	1
NLGN4X	Del_15q15.1	0.999	1
NLRP5	5p-Amp	0.999	1
OR2L13	Del_3p26.2	0.999	1
OR2L13	Del_3p21.31	0.999	1
PAK1	19p-Del	0.999	1
PAPPA2	TGFBR3	0.999	1
PAPPA2	Del_5q12.1	0.999	1
PAPPA2	Del_8p23.2	0.999	1
PDGFRA	SLAMF9	0.999	1
PDGFRA	STRA8	0.999	1
PDGFRA	TP53	0.999	1
PHKA1	PTPRU	0.999	1
PHKA1	Del_3p21.31	0.999	1
PHKA1	Del_5q31.1	0.999	1
PHKA1	Del_9q21.11	0.999	1
PHKA1	Del_11p15.5	0.999	1
PHKA1	Del_16q24.3	0.999	1
PIK3CA	STRA8	0.999	1
PTPRU	WDR66	0.999	1
PTPRU	3p-Del	0.999	1
PTPRU	Amp_10p15.1	0.999	1
PTPRU	Amp_13q33.3	0.999	1
PTPRU	Del_3p21.31	0.999	1
PTPRU	Del_16q24.3	0.999	1
RB1	20p-Amp	0.999	1
RB1	Amp_19q12	0.999	1
RB1	Del_3p21.31	0.999	1
RPL5	19q-Del	0.999	1
SIP1	Amp_17q12	0.999	1
SIP1	Amp_18q11.2	0.999	1
SIP1	Del_16q23.1	0.999	1
SLC4A3	TP53	0.999	1
STK11	Del_21q11.2	0.999	1
STK19	3p-Del	0.999	1
STK19	5q-Del	0.999	1
STRA8	Del_1p13.1	0.999	1
STRA8	Del_3p26.2	0.999	1
STRA8	Del_4q34.3	0.999	1
TCEAL5	Amp_22q11.22	0.999	1
TGFBR3	Amp_5p13.1	0.999	1
TP53	TRERF1	0.999	1
TP53	7p-Amp	0.999	1
TP53	Amp_4q12	0.999	1
TP53	Amp_7q31.2	0.999	1
TP53	Del_3p21.31	0.999	1
TP53	Del_11p15.5	0.999	1
TP53	Del_Xp22.2	0.999	1
TRERF1	WDR66	0.999	1
TTN	Amp_8p11.21	0.999	1
U2AF1	Amp_17q23.1	0.999	1
WDR66	20p-Amp	0.999	1
WDR66	5p-Amp	0.999	1
WDR66	Amp_6p21.1	0.999	1
1q-Amp	Amp_20q13.33	0.999	1
1q-Amp	Del_3q11.1	0.999	1
1q-Amp	Del_6q14.3	0.999	1
20p-Amp	Amp_14q13.3	0.999	1
20p-Amp	Amp_18q11.2	0.999	1
20p-Amp	Del_9q21.11	0.999	1
20q-Amp	7q-Amp	0.999	1
20q-Amp	Del_10p15.3	0.999	1
20q-Amp	Del_22q13.32	0.999	1
5p-Amp	Amp_17q12	0.999	1
5p-Amp	Amp_17q23.1	0.999	1
5p-Amp	Del_8p23.2	0.999	1
7p-Amp	Amp_1q21.3	0.999	1
7p-Amp	Amp_5p15.33	0.999	1
7p-Amp	Amp_6p21.1	0.999	1
7q-Amp	Amp_13q33.3	0.999	1
8q-Amp	Amp_20q13.33	0.999	1
13q-Del	Del_3p26.2	0.999	1
13q-Del	Del_4q34.3	0.999	1
13q-Del	Del_16q24.3	0.999	1
15q-Del	19q-Del	0.999	1
15q-Del	21q-Del	0.999	1
15q-Del	3q-Del	0.999	1
15q-Del	9p-Del	0.999	1
15q-Del	9q-Del	0.999	1
15q-Del	Amp_19q12	0.999	1
15q-Del	Del_5q12.1	0.999	1
17p-Del	Del_5q12.1	0.999	1
17p-Del	Del_9p23	0.999	1
17p-Del	Del_9p21.3	0.999	1
17p-Del	Del_11q23.1	0.999	1
17p-Del	Del_16q23.1	0.999	1
17p-Del	Del_19p13.2	0.999	1
17p-Del	Del_21q11.2	0.999	1
18p-Del	Del_9p23	0.999	1
18p-Del	Del_9p21.3	0.999	1
18p-Del	Del_13q34	0.999	1
18p-Del	Del_17p13.3	0.999	1
18q-Del	6q-Del	0.999	1
18q-Del	Del_3p26.2	0.999	1
18q-Del	Del_3p21.31	0.999	1
18q-Del	Del_6q26	0.999	1
18q-Del	Del_11q23.1	0.999	1
18q-Del	Del_12p13.2	0.999	1
18q-Del	Del_16q23.1	0.999	1
19p-Del	Amp_1q21.3	0.999	1
19p-Del	Del_3q29	0.999	1
19p-Del	Del_6q26	0.999	1
19p-Del	Del_9q21.11	0.999	1
19q-Del	Del_6q26	0.999	1
19q-Del	Del_9p23	0.999	1
19q-Del	Del_13q34	0.999	1
19q-Del	Del_21q11.2	0.999	1
21q-Del	8p-Del	0.999	1
21q-Del	Del_3p26.2	0.999	1
21q-Del	Del_6q26	0.999	1
21q-Del	Del_17p13.3	0.999	1
21q-Del	Del_19q13.33	0.999	1
22q-Del	3p-Del	0.999	1
22q-Del	3q-Del	0.999	1
22q-Del	Del_9q21.11	0.999	1
22q-Del	Del_13q34	0.999	1
3p-Del	Del_6q14.3	0.999	1
3p-Del	Del_12q24.33	0.999	1
3p-Del	Del_13q34	0.999	1
3q-Del	Del_9q21.11	0.999	1
3q-Del	Del_10p15.3	0.999	1
3q-Del	Del_13q12.11	0.999	1
3q-Del	Del_15q11.2	0.999	1
3q-Del	Del_19p13.2	0.999	1
5q-Del	Amp_5p13.1	0.999	1
5q-Del	Del_1p13.1	0.999	1
5q-Del	Del_6q14.3	0.999	1
5q-Del	Del_8p23.2	0.999	1
5q-Del	Del_9p23	0.999	1
5q-Del	Del_9q21.11	0.999	1
5q-Del	Del_13q34	0.999	1
6q-Del	Del_3p21.31	0.999	1
6q-Del	Del_5q31.1	0.999	1
6q-Del	Del_16q24.3	0.999	1
8p-Del	Amp_5p15.33	0.999	1
8p-Del	Amp_Xq28	0.999	1
8p-Del	Del_1p36.13	0.999	1
9p-Del	Del_10p15.3	0.999	1
9p-Del	Del_11q23.1	0.999	1
9p-Del	Del_11q25	0.999	1
9p-Del	Del_16q23.1	0.999	1
9p-Del	Del_18q21.32	0.999	1
9q-Del	Del_4q22.1	0.999	1
9q-Del	Del_10p15.3	0.999	1
9q-Del	Del_19q13.33	0.999	1
Amp_1q21.3	Amp_8q24.21	0.999	1
Amp_1q21.3	Amp_17q12	0.999	1
Amp_1q21.3	Amp_20q13.33	0.999	1
Amp_1q21.3	Del_6q26	0.999	1
Amp_1q21.3	Del_9p23	0.999	1
Amp_1q21.3	Del_10p15.3	0.999	1
Amp_1q21.3	Del_12p13.2	0.999	1
Amp_1q21.3	Del_18q21.32	0.999	1
Amp_1q21.3	Del_18q23	0.999	1
Amp_3q26.2	Amp_12q14.1	0.999	1
Amp_3q26.2	Amp_22q11.22	0.999	1
Amp_3q26.2	Del_1p36.13	0.999	1
Amp_3q26.2	Del_3p26.2	0.999	1
Amp_3q26.2	Del_3p21.31	0.999	1
Amp_3q26.2	Del_5q12.1	0.999	1
Amp_4q12	Amp_22q11.22	0.999	1
Amp_4q12	Del_11p15.5	0.999	1
Amp_5p15.33	Amp_19q12	0.999	1
Amp_5p15.33	Del_5q31.1	0.999	1
Amp_6p21.1	Del_19p13.3	0.999	1
Amp_7p11.2	Amp_8p11.21	0.999	1
Amp_7q31.2	Amp_17q12	0.999	1
Amp_7q31.2	Amp_17q23.1	0.999	1
Amp_7q31.2	Del_11p15.5	0.999	1
Amp_8q24.21	Del_8p23.2	0.999	1
Amp_8q24.21	Del_13q12.11	0.999	1
Amp_8q24.21	Del_Xp22.2	0.999	1
Amp_10p15.1	Del_9q21.11	0.999	1
Amp_10p15.1	Del_22q13.32	0.999	1
Amp_11q13.3	Amp_17q12	0.999	1
Amp_12q14.1	Amp_18q11.2	0.999	1
Amp_12q15	Del_9p23	0.999	1
Amp_14q13.3	Del_4q34.3	0.999	1
Amp_14q13.3	Del_9q21.11	0.999	1
Amp_14q13.3	Del_13q34	0.999	1
Amp_17q23.1	Del_1p36.13	0.999	1
Amp_17q23.1	Del_9p21.3	0.999	1
Amp_19q12	Del_2q22.1	0.999	1
Amp_19q12	Del_3p26.2	0.999	1
Amp_19q12	Del_9q21.11	0.999	1
Amp_19q12	Del_Xp22.2	0.999	1
Amp_20q13.33	Del_9q21.11	0.999	1
Amp_20q13.33	Del_13q12.11	0.999	1
Amp_20q13.33	Del_15q15.1	0.999	1
Amp_22q11.22	Del_5q31.1	0.999	1
Amp_Xq28	Del_12p13.2	0.999	1
Del_1p13.1	Del_3q11.1	0.999	1
Del_1p13.1	Del_4q22.1	0.999	1
Del_1p13.1	Del_5q12.1	0.999	1
Del_1p13.1	Del_6q14.3	0.999	1
Del_1p13.1	Del_6q26	0.999	1
Del_1p13.1	Del_10p15.3	0.999	1
Del_1p13.1	Del_18q23	0.999	1
Del_3p26.2	Del_3q29	0.999	1
Del_3p26.2	Del_4q22.1	0.999	1
Del_3p26.2	Del_6q14.3	0.999	1
Del_3p26.2	Del_6q26	0.999	1
Del_3p26.2	Del_9p23	0.999	1
Del_3p26.2	Del_10q26.3	0.999	1
Del_3p26.2	Del_15q15.1	0.999	1
Del_3p26.2	Del_16q24.3	0.999	1
Del_3p26.2	Del_18q21.32	0.999	1
Del_3p26.2	Del_18q23	0.999	1
Del_3p21.31	Del_6q26	0.999	1
Del_3p21.31	Del_18q23	0.999	1
Del_3q11.1	Del_10p15.3	0.999	1
Del_3q29	Del_6q14.3	0.999	1
Del_3q29	Del_19p13.2	0.999	1
Del_4q22.1	Del_6q14.3	0.999	1
Del_4q22.1	Del_18q21.32	0.999	1
Del_4q22.1	Del_21q11.2	0.999	1
Del_4q34.3	Del_6q26	0.999	1
Del_4q34.3	Del_11p15.5	0.999	1
Del_5q12.1	Del_11p15.5	0.999	1
Del_5q12.1	Del_13q12.11	0.999	1
Del_5q12.1	Del_19p13.2	0.999	1
Del_5q31.1	Del_6q14.3	0.999	1
Del_5q31.1	Del_11p15.5	0.999	1
Del_5q31.1	Del_11q23.1	0.999	1
Del_5q31.1	Del_13q34	0.999	1
Del_5q31.1	Del_16q24.3	0.999	1
Del_6q14.3	Del_16q23.1	0.999	1
Del_6q14.3	Del_19p13.3	0.999	1
Del_6q14.3	Del_19p13.2	0.999	1
Del_6q14.3	Del_22q13.32	0.999	1
Del_6q26	Del_15q11.2	0.999	1
Del_8p23.2	Del_9p21.3	0.999	1
Del_8p23.2	Del_9q21.11	0.999	1
Del_8p23.2	Del_12q24.33	0.999	1
Del_8p23.2	Del_14q32.33	0.999	1
Del_8p23.2	Del_15q15.1	0.999	1
Del_8p23.2	Del_Xp22.2	0.999	1
Del_9p23	Del_16q23.1	0.999	1
Del_9p23	Del_17p13.3	0.999	1
Del_9p23	Del_18q23	0.999	1
Del_9p23	Del_21q11.2	0.999	1
Del_9p21.3	Del_13q12.11	0.999	1
Del_9p21.3	Del_22q13.32	0.999	1
Del_9q21.11	Del_12p13.2	0.999	1
Del_9q21.11	Del_18q21.32	0.999	1
Del_9q21.11	Del_21q11.2	0.999	1
Del_9q21.11	Del_Xp22.2	0.999	1
Del_10p15.3	Del_18q23	0.999	1
Del_10p15.3	Del_19p13.2	0.999	1
Del_10q26.3	Del_11p15.5	0.999	1
Del_10q26.3	Del_18q21.32	0.999	1
Del_11p15.5	Del_11q23.1	0.999	1
Del_11p15.5	Del_19p13.3	0.999	1
Del_11p15.5	Del_22q13.32	0.999	1
Del_11p15.5	Del_Xp22.2	0.999	1
Del_11q23.1	Del_12p13.2	0.999	1
Del_11q23.1	Del_12q24.33	0.999	1
Del_11q25	Del_12q24.33	0.999	1
Del_11q25	Del_13q12.11	0.999	1
Del_11q25	Del_14q32.33	0.999	1
Del_11q25	Del_16q23.1	0.999	1
Del_11q25	Del_18q21.32	0.999	1
Del_11q25	Del_19p13.2	0.999	1
Del_11q25	Del_22q13.32	0.999	1
Del_12p13.2	Del_12q12	0.999	1
Del_12p13.2	Del_13q12.11	0.999	1
Del_12q12	Del_12q24.33	0.999	1
Del_12q12	Del_19p13.3	0.999	1
Del_12q24.33	Del_13q12.11	0.999	1
Del_12q24.33	Del_19p13.2	0.999	1
Del_13q12.11	Del_19p13.2	0.999	1
Del_15q11.2	Del_19p13.2	0.999	1
Del_16q23.1	Del_21q11.2	0.999	1
Del_16q24.3	Del_19q13.33	0.999	1
Del_17p13.3	Del_21q11.2	0.999	1
Del_18q21.32	Del_19q13.33	0.999	1
Del_18q23	Del_19q13.33	0.999	1
Del_19p13.3	Del_Xp22.2	0.999	1
ABCB1	CSMD3	1	1
ABCB1	GNAS	1	1
ABCB1	TTN	1	1
ABCB1	Amp_22q11.22	1	1
ADAMTS19	EPHA5	1	1
ADAMTS19	LRP1B	1	1
ADAMTS19	Amp_22q11.22	1	1
ARID1A	17p-Del	1	1
ATM	KRAS	1	1
BRAF	MMP16	1	1
BRAF	6q-Del	1	1
BRAF	Del_6q14.3	1	1
CACNA1F	Amp_13q33.3	1	1
CSMD3	EPHA5	1	1
CSMD3	EPHB1	1	1
CSMD3	FCRLA	1	1
CSMD3	LRP1B	1	1
CSMD3	MAP2	1	1
CSMD3	NF1	1	1
CSMD3	PAPPA2	1	1
CSMD3	SLC4A3	1	1
CSMD3	STRA8	1	1
CSMD3	TP53	1	1
CSMD3	TPTE	1	1
CSMD3	TTN	1	1
CSMD3	WT1	1	1
CSMD3	Amp_1q21.3	1	1
EGFR	7p-Amp	1	1
EGFR	7q-Amp	1	1
EGFR	Amp_7p11.2	1	1
EMG1	ERBB2	1	1
EPHA3	EPHB1	1	1
EPHA3	LRP1B	1	1
EPHA3	TTN	1	1
EPHA5	EPHB1	1	1
EPHA5	LRP1B	1	1
EPHA5	TP53	1	1
EPHA5	TTN	1	1
EPHA5	Del_5q12.1	1	1
EPHB1	KCNQ5	1	1
EPHB1	LRP1B	1	1
EPHB1	TP53	1	1
EPHB1	TPTE	1	1
EPHB1	TTN	1	1
ERBB2	SIP1	1	1
FAM65C	TRERF1	1	1
FCRLA	PAPPA2	1	1
FCRLA	TTN	1	1
FTSJD1	LRP1B	1	1
FTSJD1	TPTE	1	1
FTSJD1	Del_16q24.3	1	1
GNAS	PAPPA2	1	1
GNAS	PTPRU	1	1
GNAS	STRA8	1	1
KCNQ5	TPTE	1	1
KEAP1	PRKCG	1	1
KEAP1	STK11	1	1
KEAP1	1q-Amp	1	1
KEAP1	Amp_1q21.3	1	1
KEAP1	Amp_10p15.1	1	1
KEAP1	Del_2q22.1	1	1
KEAP1	Del_19p13.3	1	1
KEAP1	Del_19p13.2	1	1
KRAS	STK11	1	1
KRAS	Amp_12p12.1	1	1
LRP1B	MMP16	1	1
LRP1B	NRAS	1	1
LRP1B	ROBO2	1	1
LRP1B	TP53	1	1
LRP1B	TPTE	1	1
LRP1B	TRERF1	1	1
LRP1B	TTN	1	1
LRP1B	5p-Amp	1	1
MAP2	TGFBR3	1	1
MAP2	TTN	1	1
MGA	17q-Amp	1	1
MGA	Amp_3q26.2	1	1
MGA	Amp_17q12	1	1
MGA	Amp_22q11.22	1	1
MMP16	PAPPA2	1	1
MMP16	TTN	1	1
MMP16	Del_15q11.2	1	1
NF1	SLC4A3	1	1
NF1	TGFBR3	1	1
NF1	TP53	1	1
NF1	Amp_5p15.33	1	1
NFE2L2	SMARCA4	1	1
NLGN4X	Del_10q26.3	1	1
NLRP5	TTN	1	1
NLRP6	5q-Del	1	1
NRAS	STIM1	1	1
NRAS	STK19	1	1
NRAS	TP53	1	1
OR2L13	Del_1p13.1	1	1
PAPPA2	TP53	1	1
PAPPA2	TTN	1	1
PAPPA2	Del_3p26.2	1	1
PAPPA2	Del_5q31.1	1	1
PDGFRA	PHKA1	1	1
PDGFRA	Amp_Xq28	1	1
PHKA1	PRKCG	1	1
PHKA1	Amp_22q11.22	1	1
PHKA1	Del_12p13.2	1	1
PIK3CA	Amp_3q26.2	1	1
PRKCG	TTN	1	1
PTPRU	TTN	1	1
PTPRU	Amp_3q26.2	1	1
PTPRU	Del_3p26.2	1	1
PTPRU	Del_4q34.3	1	1
PTPRU	Del_15q15.1	1	1
PTPRU	Del_16q23.1	1	1
RB1	TP53	1	1
RB1	15q-Del	1	1
RB1	17p-Del	1	1
RB1	Del_15q11.2	1	1
RB1	Del_15q15.1	1	1
RB1	Del_17p13.3	1	1
ROBO2	TTN	1	1
SETD2	Del_2q22.1	1	1
SIP1	SLAMF9	1	1
SIP1	Amp_Xq28	1	1
SIP1	Del_17p13.3	1	1
SLAMF9	Amp_17q23.1	1	1
SLC4A3	TGFBR3	1	1
SLC4A3	TTN	1	1
SMAD4	Del_18q21.32	1	1
STIM1	5q-Del	1	1
STK11	Amp_1q21.3	1	1
STK11	Del_3q29	1	1
STK19	Del_3p26.2	1	1
STRA8	Amp_3q26.2	1	1
STRA8	Amp_20q13.33	1	1
STRA8	Del_10p15.3	1	1
STRA8	Del_Xp22.2	1	1
TGFBR3	TP53	1	1
TGFBR3	5p-Amp	1	1
TGFBR3	Amp_5p15.33	1	1
TGFBR3	Amp_7q31.2	1	1
TP53	TTN	1	1
TP53	5p-Amp	1	1
TP53	Amp_3q26.2	1	1
TP53	Amp_5p15.33	1	1
TP53	Amp_5p13.1	1	1
TP53	Amp_7p11.2	1	1
TP53	Amp_19q12	1	1
TP53	Del_3p26.2	1	1
TP53	Del_8p23.2	1	1
TPTE	TTN	1	1
TPTE	Amp_8q24.21	1	1
TRERF1	Amp_6p21.1	1	1
TRERF1	Amp_17q23.1	1	1
TTN	5p-Amp	1	1
TTN	Amp_5p13.1	1	1
TTN	Amp_18q11.2	1	1
U2AF1	WT1	1	1
WDR66	Del_4q34.3	1	1
WDR66	Del_10p15.3	1	1
17q-Amp	Amp_7q31.2	1	1
17q-Amp	Amp_11q13.3	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q23.1	1	1
1p-Amp	1q-Amp	1	1
1p-Amp	7q-Amp	1	1
1p-Amp	Amp_1p34.3	1	1
1p-Amp	Amp_1q21.3	1	1
1p-Amp	Del_3q11.1	1	1
1q-Amp	20q-Amp	1	1
1q-Amp	Amp_1q21.3	1	1
1q-Amp	Amp_6p21.1	1	1
1q-Amp	Del_6q26	1	1
1q-Amp	Del_19p13.3	1	1
1q-Amp	Del_19p13.2	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	Amp_3q26.2	1	1
20p-Amp	Amp_6p21.1	1	1
20p-Amp	Amp_20q13.33	1	1
20q-Amp	Amp_3q26.2	1	1
20q-Amp	Amp_6p21.1	1	1
20q-Amp	Amp_7q31.2	1	1
20q-Amp	Amp_14q13.3	1	1
20q-Amp	Amp_20q13.33	1	1
20q-Amp	Del_9q21.11	1	1
5p-Amp	Amp_5p15.33	1	1
5p-Amp	Amp_5p13.1	1	1
5p-Amp	Amp_11q13.3	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_5p13.1	1	1
7p-Amp	Amp_7p11.2	1	1
7p-Amp	Amp_7q31.2	1	1
7p-Amp	Amp_13q33.3	1	1
7p-Amp	Amp_14q13.3	1	1
7q-Amp	Amp_1q21.3	1	1
7q-Amp	Amp_7p11.2	1	1
7q-Amp	Amp_7q31.2	1	1
7q-Amp	Amp_14q13.3	1	1
8q-Amp	Amp_8p11.21	1	1
8q-Amp	Amp_8q24.21	1	1
13q-Del	17p-Del	1	1
13q-Del	18p-Del	1	1
13q-Del	18q-Del	1	1
13q-Del	22q-Del	1	1
13q-Del	6q-Del	1	1
13q-Del	8p-Del	1	1
13q-Del	9p-Del	1	1
13q-Del	Del_1p13.1	1	1
13q-Del	Del_3p21.31	1	1
13q-Del	Del_4q22.1	1	1
13q-Del	Del_6q14.3	1	1
13q-Del	Del_6q26	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_9p23	1	1
13q-Del	Del_9q21.11	1	1
13q-Del	Del_11p15.5	1	1
13q-Del	Del_11q23.1	1	1
13q-Del	Del_13q12.11	1	1
13q-Del	Del_13q34	1	1
13q-Del	Del_14q32.33	1	1
13q-Del	Del_16q23.1	1	1
13q-Del	Del_17p13.3	1	1
13q-Del	Del_18q21.32	1	1
13q-Del	Del_18q23	1	1
13q-Del	Del_19p13.3	1	1
13q-Del	Del_19p13.2	1	1
13q-Del	Del_19q13.33	1	1
15q-Del	17p-Del	1	1
15q-Del	22q-Del	1	1
15q-Del	Del_1p13.1	1	1
15q-Del	Del_3p21.31	1	1
15q-Del	Del_4q22.1	1	1
15q-Del	Del_6q14.3	1	1
15q-Del	Del_8p23.2	1	1
15q-Del	Del_9q21.11	1	1
15q-Del	Del_10q26.3	1	1
15q-Del	Del_11q23.1	1	1
15q-Del	Del_13q12.11	1	1
15q-Del	Del_15q11.2	1	1
15q-Del	Del_15q15.1	1	1
15q-Del	Del_17p13.3	1	1
15q-Del	Del_19q13.33	1	1
15q-Del	Del_21q11.2	1	1
15q-Del	Del_22q13.32	1	1
17p-Del	19p-Del	1	1
17p-Del	19q-Del	1	1
17p-Del	21q-Del	1	1
17p-Del	22q-Del	1	1
17p-Del	3p-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	9p-Del	1	1
17p-Del	Del_1p36.13	1	1
17p-Del	Del_1p13.1	1	1
17p-Del	Del_3p26.2	1	1
17p-Del	Del_3p21.31	1	1
17p-Del	Del_5q31.1	1	1
17p-Del	Del_6q14.3	1	1
17p-Del	Del_6q26	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_13q12.11	1	1
17p-Del	Del_13q34	1	1
17p-Del	Del_14q32.33	1	1
17p-Del	Del_15q11.2	1	1
17p-Del	Del_15q15.1	1	1
17p-Del	Del_16q24.3	1	1
17p-Del	Del_17p13.3	1	1
17p-Del	Del_19p13.3	1	1
17p-Del	Del_19q13.33	1	1
18p-Del	18q-Del	1	1
18p-Del	Del_13q12.11	1	1
18p-Del	Del_18q21.32	1	1
18p-Del	Del_18q23	1	1
18q-Del	8p-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_9p21.3	1	1
18q-Del	Del_11p15.5	1	1
18q-Del	Del_13q12.11	1	1
18q-Del	Del_13q34	1	1
18q-Del	Del_17p13.3	1	1
18q-Del	Del_18q21.32	1	1
18q-Del	Del_18q23	1	1
18q-Del	Del_19p13.2	1	1
19p-Del	19q-Del	1	1
19p-Del	21q-Del	1	1
19p-Del	22q-Del	1	1
19p-Del	5q-Del	1	1
19p-Del	9p-Del	1	1
19p-Del	9q-Del	1	1
19p-Del	Del_1p13.1	1	1
19p-Del	Del_3p21.31	1	1
19p-Del	Del_4q22.1	1	1
19p-Del	Del_5q12.1	1	1
19p-Del	Del_5q31.1	1	1
19p-Del	Del_9p23	1	1
19p-Del	Del_9p21.3	1	1
19p-Del	Del_11q23.1	1	1
19p-Del	Del_13q34	1	1
19p-Del	Del_17p13.3	1	1
19p-Del	Del_19p13.3	1	1
19p-Del	Del_19p13.2	1	1
19p-Del	Del_19q13.33	1	1
19p-Del	Del_21q11.2	1	1
19p-Del	Del_22q13.32	1	1
19q-Del	21q-Del	1	1
19q-Del	22q-Del	1	1
19q-Del	5q-Del	1	1
19q-Del	9p-Del	1	1
19q-Del	9q-Del	1	1
19q-Del	Del_3p21.31	1	1
19q-Del	Del_4q22.1	1	1
19q-Del	Del_5q12.1	1	1
19q-Del	Del_5q31.1	1	1
19q-Del	Del_9q21.11	1	1
19q-Del	Del_16q23.1	1	1
19q-Del	Del_16q24.3	1	1
19q-Del	Del_17p13.3	1	1
19q-Del	Del_19p13.3	1	1
19q-Del	Del_19p13.2	1	1
19q-Del	Del_19q13.33	1	1
19q-Del	Del_22q13.32	1	1
21q-Del	22q-Del	1	1
21q-Del	5q-Del	1	1
21q-Del	Del_1p36.13	1	1
21q-Del	Del_1p13.1	1	1
21q-Del	Del_3q29	1	1
21q-Del	Del_5q12.1	1	1
21q-Del	Del_5q31.1	1	1
21q-Del	Del_11q23.1	1	1
21q-Del	Del_11q25	1	1
21q-Del	Del_14q32.33	1	1
21q-Del	Del_15q15.1	1	1
21q-Del	Del_19p13.3	1	1
21q-Del	Del_19p13.2	1	1
21q-Del	Del_21q11.2	1	1
21q-Del	Del_22q13.32	1	1
22q-Del	5q-Del	1	1
22q-Del	8p-Del	1	1
22q-Del	9p-Del	1	1
22q-Del	9q-Del	1	1
22q-Del	Amp_1q21.3	1	1
22q-Del	Del_1p36.13	1	1
22q-Del	Del_1p13.1	1	1
22q-Del	Del_3p21.31	1	1
22q-Del	Del_4q22.1	1	1
22q-Del	Del_4q34.3	1	1
22q-Del	Del_5q12.1	1	1
22q-Del	Del_5q31.1	1	1
22q-Del	Del_6q14.3	1	1
22q-Del	Del_6q26	1	1
22q-Del	Del_8p23.2	1	1
22q-Del	Del_9p23	1	1
22q-Del	Del_9p21.3	1	1
22q-Del	Del_11q23.1	1	1
22q-Del	Del_11q25	1	1
22q-Del	Del_13q12.11	1	1
22q-Del	Del_15q11.2	1	1
22q-Del	Del_15q15.1	1	1
22q-Del	Del_16q23.1	1	1
22q-Del	Del_16q24.3	1	1
22q-Del	Del_17p13.3	1	1
22q-Del	Del_19p13.3	1	1
22q-Del	Del_19p13.2	1	1
22q-Del	Del_19q13.33	1	1
22q-Del	Del_21q11.2	1	1
22q-Del	Del_22q13.32	1	1
3p-Del	3q-Del	1	1
3p-Del	8p-Del	1	1
3p-Del	9q-Del	1	1
3p-Del	Del_1p36.13	1	1
3p-Del	Del_1p13.1	1	1
3p-Del	Del_3p26.2	1	1
3p-Del	Del_3p21.31	1	1
3p-Del	Del_3q11.1	1	1
3p-Del	Del_3q29	1	1
3p-Del	Del_4q22.1	1	1
3p-Del	Del_4q34.3	1	1
3p-Del	Del_5q12.1	1	1
3p-Del	Del_5q31.1	1	1
3p-Del	Del_8p23.2	1	1
3p-Del	Del_9q21.11	1	1
3p-Del	Del_10p15.3	1	1
3p-Del	Del_10q26.3	1	1
3p-Del	Del_13q12.11	1	1
3p-Del	Del_15q11.2	1	1
3p-Del	Del_15q15.1	1	1
3p-Del	Del_16q24.3	1	1
3p-Del	Del_17p13.3	1	1
3p-Del	Del_19q13.33	1	1
3q-Del	9p-Del	1	1
3q-Del	9q-Del	1	1
3q-Del	Del_1p13.1	1	1
3q-Del	Del_3p26.2	1	1
3q-Del	Del_3p21.31	1	1
3q-Del	Del_3q11.1	1	1
3q-Del	Del_3q29	1	1
3q-Del	Del_4q22.1	1	1
3q-Del	Del_6q14.3	1	1
3q-Del	Del_15q15.1	1	1
3q-Del	Del_16q24.3	1	1
3q-Del	Del_17p13.3	1	1
3q-Del	Del_19p13.3	1	1
3q-Del	Del_19q13.33	1	1
5q-Del	9p-Del	1	1
5q-Del	Amp_19q12	1	1
5q-Del	Del_1p36.13	1	1
5q-Del	Del_3p26.2	1	1
5q-Del	Del_3p21.31	1	1
5q-Del	Del_4q22.1	1	1
5q-Del	Del_4q34.3	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_5q31.1	1	1
5q-Del	Del_10q26.3	1	1
5q-Del	Del_11q23.1	1	1
5q-Del	Del_11q25	1	1
5q-Del	Del_14q32.33	1	1
5q-Del	Del_15q11.2	1	1
5q-Del	Del_15q15.1	1	1
5q-Del	Del_16q23.1	1	1
5q-Del	Del_16q24.3	1	1
5q-Del	Del_17p13.3	1	1
5q-Del	Del_19p13.3	1	1
5q-Del	Del_19p13.2	1	1
5q-Del	Del_19q13.33	1	1
5q-Del	Del_21q11.2	1	1
5q-Del	Del_22q13.32	1	1
6q-Del	8p-Del	1	1
6q-Del	9p-Del	1	1
6q-Del	9q-Del	1	1
6q-Del	Del_1p36.13	1	1
6q-Del	Del_6q14.3	1	1
6q-Del	Del_6q26	1	1
6q-Del	Del_8p23.2	1	1
6q-Del	Del_9q21.11	1	1
6q-Del	Del_11p15.5	1	1
6q-Del	Del_12p13.2	1	1
6q-Del	Del_13q12.11	1	1
6q-Del	Del_13q34	1	1
6q-Del	Del_17p13.3	1	1
6q-Del	Del_19q13.33	1	1
8p-Del	9p-Del	1	1
8p-Del	9q-Del	1	1
8p-Del	Del_3p26.2	1	1
8p-Del	Del_3p21.31	1	1
8p-Del	Del_4q34.3	1	1
8p-Del	Del_5q31.1	1	1
8p-Del	Del_6q14.3	1	1
8p-Del	Del_6q26	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_9p23	1	1
8p-Del	Del_9p21.3	1	1
8p-Del	Del_9q21.11	1	1
8p-Del	Del_11p15.5	1	1
8p-Del	Del_11q23.1	1	1
8p-Del	Del_11q25	1	1
8p-Del	Del_12p13.2	1	1
8p-Del	Del_12q24.33	1	1
8p-Del	Del_13q12.11	1	1
8p-Del	Del_13q34	1	1
8p-Del	Del_14q32.33	1	1
8p-Del	Del_15q11.2	1	1
8p-Del	Del_16q23.1	1	1
8p-Del	Del_16q24.3	1	1
8p-Del	Del_17p13.3	1	1
8p-Del	Del_18q21.32	1	1
8p-Del	Del_18q23	1	1
8p-Del	Del_19p13.3	1	1
8p-Del	Del_19p13.2	1	1
8p-Del	Del_19q13.33	1	1
8p-Del	Del_22q13.32	1	1
9p-Del	9q-Del	1	1
9p-Del	Del_1p36.13	1	1
9p-Del	Del_1p13.1	1	1
9p-Del	Del_3p26.2	1	1
9p-Del	Del_3p21.31	1	1
9p-Del	Del_4q22.1	1	1
9p-Del	Del_5q31.1	1	1
9p-Del	Del_6q14.3	1	1
9p-Del	Del_6q26	1	1
9p-Del	Del_8p23.2	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_9q21.11	1	1
9p-Del	Del_11p15.5	1	1
9p-Del	Del_13q12.11	1	1
9p-Del	Del_13q34	1	1
9p-Del	Del_14q32.33	1	1
9p-Del	Del_16q24.3	1	1
9p-Del	Del_17p13.3	1	1
9p-Del	Del_19p13.3	1	1
9p-Del	Del_19p13.2	1	1
9p-Del	Del_19q13.33	1	1
9p-Del	Del_21q11.2	1	1
9p-Del	Del_22q13.32	1	1
9q-Del	Del_1p36.13	1	1
9q-Del	Del_1p13.1	1	1
9q-Del	Del_3p26.2	1	1
9q-Del	Del_3p21.31	1	1
9q-Del	Del_5q12.1	1	1
9q-Del	Del_6q14.3	1	1
9q-Del	Del_6q26	1	1
9q-Del	Del_8p23.2	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_9q21.11	1	1
9q-Del	Del_11p15.5	1	1
9q-Del	Del_13q12.11	1	1
9q-Del	Del_13q34	1	1
9q-Del	Del_16q23.1	1	1
9q-Del	Del_16q24.3	1	1
9q-Del	Del_17p13.3	1	1
9q-Del	Del_19p13.3	1	1
9q-Del	Del_19p13.2	1	1
9q-Del	Del_22q13.32	1	1
Amp_1p34.3	Del_16q24.3	1	1
Amp_1q21.3	Amp_6p21.1	1	1
Amp_1q21.3	Amp_10p15.1	1	1
Amp_1q21.3	Amp_14q13.3	1	1
Amp_1q21.3	Amp_17q23.1	1	1
Amp_1q21.3	Amp_22q11.22	1	1
Amp_1q21.3	Del_1p13.1	1	1
Amp_1q21.3	Del_3q29	1	1
Amp_1q21.3	Del_6q14.3	1	1
Amp_1q21.3	Del_11q23.1	1	1
Amp_1q21.3	Del_19p13.3	1	1
Amp_1q21.3	Del_19p13.2	1	1
Amp_1q21.3	Del_22q13.32	1	1
Amp_3q26.2	Amp_6p21.1	1	1
Amp_3q26.2	Amp_17q12	1	1
Amp_3q26.2	Amp_19q12	1	1
Amp_4q12	Del_2q22.1	1	1
Amp_4q12	Del_5q12.1	1	1
Amp_4q12	Del_5q31.1	1	1
Amp_4q12	Del_8p23.2	1	1
Amp_4q12	Del_22q13.32	1	1
Amp_5p15.33	Amp_5p13.1	1	1
Amp_5p15.33	Del_8p23.2	1	1
Amp_5p13.1	Amp_6p21.1	1	1
Amp_5p13.1	Amp_7p11.2	1	1
Amp_5p13.1	Amp_11q13.3	1	1
Amp_5p13.1	Del_5q31.1	1	1
Amp_6p21.1	Amp_8p11.21	1	1
Amp_6p21.1	Amp_10p15.1	1	1
Amp_6p21.1	Amp_17q23.1	1	1
Amp_7p11.2	Amp_7q31.2	1	1
Amp_7p11.2	Amp_13q33.3	1	1
Amp_7q31.2	Amp_11q13.3	1	1
Amp_8p11.21	Amp_8q24.21	1	1
Amp_8p11.21	Amp_11q13.3	1	1
Amp_8p11.21	Del_8p23.2	1	1
Amp_8p11.21	Del_13q34	1	1
Amp_8q24.21	Amp_14q13.3	1	1
Amp_11q13.3	Del_11q25	1	1
Amp_12p12.1	Amp_12q14.1	1	1
Amp_12p12.1	Amp_12q15	1	1
Amp_12p12.1	Del_3p26.2	1	1
Amp_12p12.1	Del_13q12.11	1	1
Amp_12q14.1	Amp_12q15	1	1
Amp_12q15	Amp_18q11.2	1	1
Amp_12q15	Amp_20q13.33	1	1
Amp_12q15	Del_13q12.11	1	1
Amp_13q33.3	Amp_20q13.33	1	1
Amp_14q13.3	Amp_18q11.2	1	1
Amp_14q13.3	Del_16q23.1	1	1
Amp_14q13.3	Del_16q24.3	1	1
Amp_17q12	Amp_17q23.1	1	1
Amp_17q12	Del_9q21.11	1	1
Amp_17q12	Del_11p15.5	1	1
Amp_17q23.1	Del_9p23	1	1
Amp_17q23.1	Del_17p13.3	1	1
Amp_19q12	Amp_Xq28	1	1
Amp_19q12	Del_3p21.31	1	1
Amp_19q12	Del_5q12.1	1	1
Amp_19q12	Del_19p13.3	1	1
Amp_20q13.33	Amp_22q11.22	1	1
Amp_20q13.33	Del_22q13.32	1	1
Amp_22q11.22	Del_8p23.2	1	1
Amp_22q11.22	Del_9q21.11	1	1
Amp_22q11.22	Del_13q34	1	1
Amp_22q11.22	Del_22q13.32	1	1
Amp_22q11.22	Del_Xp22.2	1	1
Amp_Xq28	Del_Xp22.2	1	1
Del_1p36.13	Del_1p13.1	1	1
Del_1p36.13	Del_3p26.2	1	1
Del_1p36.13	Del_3p21.31	1	1
Del_1p36.13	Del_6q14.3	1	1
Del_1p36.13	Del_6q26	1	1
Del_1p36.13	Del_9q21.11	1	1
Del_1p36.13	Del_13q12.11	1	1
Del_1p36.13	Del_17p13.3	1	1
Del_1p36.13	Del_21q11.2	1	1
Del_1p13.1	Del_3p26.2	1	1
Del_1p13.1	Del_3p21.31	1	1
Del_1p13.1	Del_3q29	1	1
Del_1p13.1	Del_4q34.3	1	1
Del_1p13.1	Del_5q31.1	1	1
Del_1p13.1	Del_9p23	1	1
Del_1p13.1	Del_9q21.11	1	1
Del_1p13.1	Del_10q26.3	1	1
Del_1p13.1	Del_11q23.1	1	1
Del_1p13.1	Del_11q25	1	1
Del_1p13.1	Del_13q12.11	1	1
Del_1p13.1	Del_15q11.2	1	1
Del_1p13.1	Del_15q15.1	1	1
Del_1p13.1	Del_19p13.3	1	1
Del_1p13.1	Del_19p13.2	1	1
Del_1p13.1	Del_19q13.33	1	1
Del_1p13.1	Del_21q11.2	1	1
Del_1p13.1	Del_22q13.32	1	1
Del_3p26.2	Del_3p21.31	1	1
Del_3p26.2	Del_3q11.1	1	1
Del_3p26.2	Del_4q34.3	1	1
Del_3p26.2	Del_5q12.1	1	1
Del_3p26.2	Del_5q31.1	1	1
Del_3p26.2	Del_8p23.2	1	1
Del_3p26.2	Del_9q21.11	1	1
Del_3p26.2	Del_10p15.3	1	1
Del_3p26.2	Del_13q12.11	1	1
Del_3p26.2	Del_13q34	1	1
Del_3p26.2	Del_15q11.2	1	1
Del_3p26.2	Del_17p13.3	1	1
Del_3p26.2	Del_19p13.3	1	1
Del_3p26.2	Del_19q13.33	1	1
Del_3p26.2	Del_21q11.2	1	1
Del_3p21.31	Del_3q11.1	1	1
Del_3p21.31	Del_4q22.1	1	1
Del_3p21.31	Del_4q34.3	1	1
Del_3p21.31	Del_5q12.1	1	1
Del_3p21.31	Del_5q31.1	1	1
Del_3p21.31	Del_6q14.3	1	1
Del_3p21.31	Del_8p23.2	1	1
Del_3p21.31	Del_9p23	1	1
Del_3p21.31	Del_9q21.11	1	1
Del_3p21.31	Del_10p15.3	1	1
Del_3p21.31	Del_10q26.3	1	1
Del_3p21.31	Del_11p15.5	1	1
Del_3p21.31	Del_12p13.2	1	1
Del_3p21.31	Del_13q12.11	1	1
Del_3p21.31	Del_13q34	1	1
Del_3p21.31	Del_15q11.2	1	1
Del_3p21.31	Del_15q15.1	1	1
Del_3p21.31	Del_16q23.1	1	1
Del_3p21.31	Del_16q24.3	1	1
Del_3p21.31	Del_17p13.3	1	1
Del_3p21.31	Del_19p13.3	1	1
Del_3p21.31	Del_19p13.2	1	1
Del_3p21.31	Del_19q13.33	1	1
Del_3p21.31	Del_21q11.2	1	1
Del_3p21.31	Del_22q13.32	1	1
Del_3q11.1	Del_3q29	1	1
Del_3q29	Del_15q15.1	1	1
Del_3q29	Del_19p13.3	1	1
Del_3q29	Del_19q13.33	1	1
Del_4q22.1	Del_4q34.3	1	1
Del_4q22.1	Del_5q31.1	1	1
Del_4q22.1	Del_9q21.11	1	1
Del_4q22.1	Del_11q23.1	1	1
Del_4q22.1	Del_11q25	1	1
Del_4q22.1	Del_13q12.11	1	1
Del_4q22.1	Del_13q34	1	1
Del_4q22.1	Del_14q32.33	1	1
Del_4q22.1	Del_15q11.2	1	1
Del_4q22.1	Del_15q15.1	1	1
Del_4q22.1	Del_16q23.1	1	1
Del_4q22.1	Del_16q24.3	1	1
Del_4q22.1	Del_17p13.3	1	1
Del_4q22.1	Del_19p13.3	1	1
Del_4q22.1	Del_19p13.2	1	1
Del_4q22.1	Del_19q13.33	1	1
Del_4q22.1	Del_22q13.32	1	1
Del_4q34.3	Del_5q12.1	1	1
Del_4q34.3	Del_5q31.1	1	1
Del_4q34.3	Del_8p23.2	1	1
Del_4q34.3	Del_13q12.11	1	1
Del_4q34.3	Del_14q32.33	1	1
Del_4q34.3	Del_16q23.1	1	1
Del_4q34.3	Del_16q24.3	1	1
Del_4q34.3	Del_17p13.3	1	1
Del_4q34.3	Del_18q23	1	1
Del_4q34.3	Del_19p13.2	1	1
Del_4q34.3	Del_22q13.32	1	1
Del_5q12.1	Del_5q31.1	1	1
Del_5q12.1	Del_9q21.11	1	1
Del_5q12.1	Del_10q26.3	1	1
Del_5q12.1	Del_15q11.2	1	1
Del_5q12.1	Del_15q15.1	1	1
Del_5q12.1	Del_16q23.1	1	1
Del_5q12.1	Del_16q24.3	1	1
Del_5q12.1	Del_17p13.3	1	1
Del_5q12.1	Del_18q21.32	1	1
Del_5q12.1	Del_19p13.3	1	1
Del_5q12.1	Del_19q13.33	1	1
Del_5q12.1	Del_21q11.2	1	1
Del_5q12.1	Del_22q13.32	1	1
Del_5q31.1	Del_6q26	1	1
Del_5q31.1	Del_8p23.2	1	1
Del_5q31.1	Del_9q21.11	1	1
Del_5q31.1	Del_10q26.3	1	1
Del_5q31.1	Del_11q25	1	1
Del_5q31.1	Del_13q12.11	1	1
Del_5q31.1	Del_14q32.33	1	1
Del_5q31.1	Del_15q11.2	1	1
Del_5q31.1	Del_15q15.1	1	1
Del_5q31.1	Del_16q23.1	1	1
Del_5q31.1	Del_17p13.3	1	1
Del_5q31.1	Del_19p13.3	1	1
Del_5q31.1	Del_19p13.2	1	1
Del_5q31.1	Del_19q13.33	1	1
Del_5q31.1	Del_21q11.2	1	1
Del_5q31.1	Del_22q13.32	1	1
Del_6q14.3	Del_6q26	1	1
Del_6q14.3	Del_8p23.2	1	1
Del_6q14.3	Del_9q21.11	1	1
Del_6q14.3	Del_10p15.3	1	1
Del_6q14.3	Del_11q23.1	1	1
Del_6q14.3	Del_11q25	1	1
Del_6q14.3	Del_12p13.2	1	1
Del_6q14.3	Del_13q12.11	1	1
Del_6q14.3	Del_13q34	1	1
Del_6q14.3	Del_15q11.2	1	1
Del_6q14.3	Del_15q15.1	1	1
Del_6q14.3	Del_16q24.3	1	1
Del_6q14.3	Del_17p13.3	1	1
Del_6q14.3	Del_18q21.32	1	1
Del_6q14.3	Del_19q13.33	1	1
Del_6q26	Del_8p23.2	1	1
Del_6q26	Del_9q21.11	1	1
Del_6q26	Del_10p15.3	1	1
Del_6q26	Del_11p15.5	1	1
Del_6q26	Del_12p13.2	1	1
Del_6q26	Del_13q12.11	1	1
Del_6q26	Del_13q34	1	1
Del_6q26	Del_15q15.1	1	1
Del_6q26	Del_16q23.1	1	1
Del_6q26	Del_16q24.3	1	1
Del_6q26	Del_17p13.3	1	1
Del_6q26	Del_19p13.3	1	1
Del_6q26	Del_19p13.2	1	1
Del_6q26	Del_19q13.33	1	1
Del_6q26	Del_22q13.32	1	1
Del_8p23.2	Del_9p23	1	1
Del_8p23.2	Del_11p15.5	1	1
Del_8p23.2	Del_11q23.1	1	1
Del_8p23.2	Del_11q25	1	1
Del_8p23.2	Del_13q12.11	1	1
Del_8p23.2	Del_13q34	1	1
Del_8p23.2	Del_16q23.1	1	1
Del_8p23.2	Del_16q24.3	1	1
Del_8p23.2	Del_17p13.3	1	1
Del_8p23.2	Del_18q21.32	1	1
Del_8p23.2	Del_18q23	1	1
Del_8p23.2	Del_19p13.3	1	1
Del_8p23.2	Del_19p13.2	1	1
Del_8p23.2	Del_22q13.32	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_9q21.11	1	1
Del_9p23	Del_11p15.5	1	1
Del_9p23	Del_11q23.1	1	1
Del_9p23	Del_13q12.11	1	1
Del_9p23	Del_13q34	1	1
Del_9p23	Del_19p13.3	1	1
Del_9p23	Del_19p13.2	1	1
Del_9p23	Del_19q13.33	1	1
Del_9p23	Del_22q13.32	1	1
Del_9p21.3	Del_9q21.11	1	1
Del_9p21.3	Del_18q21.32	1	1
Del_9p21.3	Del_19p13.3	1	1
Del_9p21.3	Del_19p13.2	1	1
Del_9q21.11	Del_10q26.3	1	1
Del_9q21.11	Del_11p15.5	1	1
Del_9q21.11	Del_13q12.11	1	1
Del_9q21.11	Del_13q34	1	1
Del_9q21.11	Del_16q23.1	1	1
Del_9q21.11	Del_16q24.3	1	1
Del_9q21.11	Del_17p13.3	1	1
Del_9q21.11	Del_19p13.3	1	1
Del_9q21.11	Del_19p13.2	1	1
Del_9q21.11	Del_19q13.33	1	1
Del_9q21.11	Del_22q13.32	1	1
Del_10p15.3	Del_10q26.3	1	1
Del_10q26.3	Del_13q12.11	1	1
Del_10q26.3	Del_15q15.1	1	1
Del_11p15.5	Del_12p13.2	1	1
Del_11p15.5	Del_13q12.11	1	1
Del_11p15.5	Del_13q34	1	1
Del_11p15.5	Del_16q23.1	1	1
Del_11p15.5	Del_16q24.3	1	1
Del_11p15.5	Del_17p13.3	1	1
Del_11p15.5	Del_18q21.32	1	1
Del_11p15.5	Del_18q23	1	1
Del_11q23.1	Del_11q25	1	1
Del_11q23.1	Del_13q12.11	1	1
Del_11q23.1	Del_13q34	1	1
Del_11q23.1	Del_14q32.33	1	1
Del_11q23.1	Del_15q15.1	1	1
Del_11q23.1	Del_16q23.1	1	1
Del_11q23.1	Del_16q24.3	1	1
Del_11q23.1	Del_17p13.3	1	1
Del_11q23.1	Del_19p13.3	1	1
Del_11q23.1	Del_19p13.2	1	1
Del_11q23.1	Del_21q11.2	1	1
Del_11q23.1	Del_22q13.32	1	1
Del_11q25	Del_12p13.2	1	1
Del_11q25	Del_16q24.3	1	1
Del_11q25	Del_17p13.3	1	1
Del_11q25	Del_19p13.3	1	1
Del_12p13.2	Del_12q24.33	1	1
Del_12p13.2	Del_17p13.3	1	1
Del_12p13.2	Del_18q21.32	1	1
Del_13q12.11	Del_13q34	1	1
Del_13q12.11	Del_14q32.33	1	1
Del_13q12.11	Del_15q11.2	1	1
Del_13q12.11	Del_15q15.1	1	1
Del_13q12.11	Del_16q23.1	1	1
Del_13q12.11	Del_16q24.3	1	1
Del_13q12.11	Del_17p13.3	1	1
Del_13q12.11	Del_18q21.32	1	1
Del_13q12.11	Del_18q23	1	1
Del_13q12.11	Del_19p13.3	1	1
Del_13q12.11	Del_19q13.33	1	1
Del_13q12.11	Del_22q13.32	1	1
Del_13q34	Del_16q23.1	1	1
Del_13q34	Del_16q24.3	1	1
Del_13q34	Del_17p13.3	1	1
Del_13q34	Del_18q21.32	1	1
Del_13q34	Del_18q23	1	1
Del_13q34	Del_19p13.3	1	1
Del_13q34	Del_19p13.2	1	1
Del_13q34	Del_19q13.33	1	1
Del_13q34	Del_22q13.32	1	1
Del_14q32.33	Del_16q23.1	1	1
Del_14q32.33	Del_16q24.3	1	1
Del_14q32.33	Del_17p13.3	1	1
Del_14q32.33	Del_19p13.3	1	1
Del_14q32.33	Del_19p13.2	1	1
Del_15q11.2	Del_15q15.1	1	1
Del_15q11.2	Del_16q23.1	1	1
Del_15q11.2	Del_16q24.3	1	1
Del_15q11.2	Del_17p13.3	1	1
Del_15q11.2	Del_19q13.33	1	1
Del_15q11.2	Del_21q11.2	1	1
Del_15q11.2	Del_22q13.32	1	1
Del_15q15.1	Del_16q23.1	1	1
Del_15q15.1	Del_16q24.3	1	1
Del_15q15.1	Del_17p13.3	1	1
Del_15q15.1	Del_19p13.2	1	1
Del_15q15.1	Del_19q13.33	1	1
Del_15q15.1	Del_21q11.2	1	1
Del_15q15.1	Del_22q13.32	1	1
Del_16q23.1	Del_16q24.3	1	1
Del_16q23.1	Del_17p13.3	1	1
Del_16q23.1	Del_18q23	1	1
Del_16q23.1	Del_19p13.2	1	1
Del_16q23.1	Del_22q13.32	1	1
Del_16q24.3	Del_17p13.3	1	1
Del_16q24.3	Del_19p13.2	1	1
Del_16q24.3	Del_22q13.32	1	1
Del_17p13.3	Del_18q21.32	1	1
Del_17p13.3	Del_18q23	1	1
Del_17p13.3	Del_19p13.3	1	1
Del_17p13.3	Del_19p13.2	1	1
Del_17p13.3	Del_19q13.33	1	1
Del_17p13.3	Del_22q13.32	1	1
Del_18q21.32	Del_18q23	1	1
Del_18q21.32	Del_19p13.3	1	1
Del_18q21.32	Del_19p13.2	1	1
Del_19p13.3	Del_19p13.2	1	1
Del_19p13.3	Del_19q13.33	1	1
Del_19p13.3	Del_21q11.2	1	1
Del_19p13.3	Del_22q13.32	1	1
Del_19p13.2	Del_19q13.33	1	1
Del_19p13.2	Del_21q11.2	1	1
Del_19p13.2	Del_22q13.32	1	1
Del_19q13.33	Del_22q13.32	1	1
Del_21q11.2	Del_22q13.32	1	1
KRAS	TP53	8.14e-07	1
EGFR	KRAS	9.43e-11	1
